Sender: LSF System <lsf@node1421>
Subject: Job 8704435: <iteration_238745> Done

Job <iteration_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1421>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745> was used as the working directory.
Started at Fri Nov 16 04:45:05 2012
Results reported at Fri Nov 16 04:45:12 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
echo starting
ls iteration*/exited 2>&1
return_code=$?
if [ ${return_code} -eq 0 ]; then
echo some scatter or gather jobs failed;
echo ${return_code} > exited;
exit 1;
fi
ls exited 2>&1
return_code=$?
if [ ${return_code} -eq 0 ]; then
echo previous iteration failed;
echo ${return_code} > exited;
exit 1;
fi
/xchip/tcga/gdac_prod/source/analysis_pipeline/scripts/scatter-gather-iterator.py /xchip/tcga/gdac_prod/source/analysis_pipeline/scripts/iterative-scatter-gather.py --job-suffix 238745 --priority 50 cga /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/scatter-gather.xml /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
return_code=$?
if [ ${return_code} -ne 0 ]; then
echo iterator failed ${return_code};
echo ${return_code} > exited;
exit ${return_code};
fi
cat iteration1/jobSubmissions.txt >> jobSubmissions.txt
rm -f iteration1/jobSubmissions.txt
echo '*** Scatter Gather stdandard out:' 2>&1
cat iteration1/scatter-gather.out.txt 2>&1
rm -f iteration1/scatter-gather.out.txt 2>&1
echo '*** Scatter Gather stdandard err:' 2>&1
cat iteration1/scatter-gather.err.txt 2>&1
rm -f iteration1/scatter-gather.err.txt 2>&1
ls iteration1/sg-next-iteration.txt 2>&1
return_code=$?
if [ ${return_code} -eq 0 ]; then
rm -f iteration1/sg-next-iteration.txt
else
rm -f scatterGatherParameters.txt
rm -f programParameters.txt
mv iteration1/* /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745
rmdir iteration*
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :      1.39 sec.
    Max Memory :        10 MB
    Max Swap   :        39 MB

    Max Processes  :         1
    Max Threads    :         1

The output (if any) follows:

starting
ls: iteration*/exited: No such file or directory
ls: exited: No such file or directory
Running scatter-gather-iterator with the following args: /xchip/tcga/gdac_prod/source/analysis_pipeline/scripts/scatter-gather-iterator.py /xchip/tcga/gdac_prod/source/analysis_pipeline/scripts/iterative-scatter-gather.py --job-suffix 238745 --priority 50 cga /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/scatter-gather.xml /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
Finished in 1 iterations
*** Scatter Gather stdandard out:
Sender: LSF System <lsf@node1549>
Subject: Job 8704433: <gather_238745> Done

Job <gather_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1549>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1> was used as the working directory.
Started at Fri Nov 16 03:11:50 2012
Results reported at Fri Nov 16 04:44:57 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
ls scatter.*/exited 2>&1
return_code=$?
if [ ${return_code} -eq 0 ]; then
echo some scatter jobs failed;
echo ${return_code} > exited;
exit 1;
fi
if [ `ls -1 scatter.*/success | wc -l` -ne 200 ]; then
echo expected result files missing, try rerunning;
echo 1 > exited;
exit 1;
fi
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 0  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
echo gather failed;
echo ${return_code} > exited;
exit ${return_code};
fi
rm -f prepareResults.out
echo '*** Prepare stdandard out:' 2>&1
cat prepare.out 2>&1
rm -f prepare.out 2>&1
echo '*** Prepare stdandard err:' 2>&1
cat prepare.err 2>&1
rm -f prepare.err 2>&1
echo '*** Scatter stdandard out:' 2>&1
cat scatter.*/scatter.out 2>&1
rm -f scatter.*/scatter.out 2>&1
echo '*** Scatter stdandard err:' 2>&1
cat scatter.*/scatter.err 2>&1
rm -f scatter.*/scatter.err 2>&1
echo '*** Scatter retry log:'
head scatter.*.tries
echo
rm -f scatter.*.tries
rm -f scatter.*/success
rm -f scatter.*/java.opts
rmdir scatter.*
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   4984.99 sec.
    Max Memory :      7987 MB
    Max Swap   :      8961 MB

    Max Processes  :         9
    Max Threads    :        72

The output (if any) follows:

ls: scatter.*/exited: No such file or directory
fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
0
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 0
                            is_scatter: 0
                             is_gather: 1

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Saved ./THCA.mutation_filtering_report.txt
Writing coverage to ./THCA.per_exon.coverage.txt
HUGE STRUCT: SAVING CHUNK 1/7
  [save_struct] 65/333 66/333 67/333 68/333 69/333 70/333 71/333 72/333 73/333 74/333 75/333 76/333 77/333 78/333 79/333 80/333 81/333 82/333 83/333 84/333 85/333 86/333 87/333 88/333 89/333 90/333 91/333 92/333 93/333 94/333 95/333 96/333 97/333 98/333 99/333 100/333 101/333 102/333 103/333 104/333 105/333 106/333 107/333 108/333 109/333 110/333 111/333 112/333 113/333 114/333 115/333 116/333 117/333 118/333 119/333 120/333 121/333 122/333 123/333 124/333 125/333 126/333 127/333 128/333 129/333 130/333 131/333 132/333 133/333 134/333 135/333 136/333 137/333 138/333 139/333 140/333 141/333 142/333 143/333 144/333 145/333 146/333 147/333 148/333 149/333 150/333 151/333 152/333 153/333 154/333 155/333 156/333 157/333 158/333 159/333 160/333 161/333 162/333 163/333 164/333 165/333 166/333 167/333 168/333 169/333 170/333 171/333 172/333 173/333 174/333 175/333 176/333 177/333 178/333 179/333 180/333 181/333 182/333 183/333 184/333 185/333 186/333 187/333 188/333 189/333 190/333 191/333 192/333 193/333 194/333 195/333 196/333 197/333 198/333 199/333 200/333 201/333 202/333 203/333 204/333 205/333 206/333 207/333 208/333 209/333 210/333 211/333 212/333 213/333 214/333 215/333 216/333 217/333 218/333 219/333 220/333 221/333 222/333 223/333 224/333 225/333 226/333 227/333 228/333 229/333 230/333 231/333 232/333 233/333 234/333 235/333 236/333 237/333 238/333 239/333 240/333 241/333 242/333 243/333 244/333 245/333 246/333 247/333 248/333 249/333 250/333 251/333 252/333 253/333 254/333 255/333 256/333 257/333 258/333 259/333 260/333 261/333 262/333 263/333 264/333 265/333 266/333 267/333 268/333 269/333 270/333 271/333 272/333 273/333 274/333 275/333 276/333 277/333 278/333 279/333 280/333 281/333 282/333 283/333 284/333 285/333 286/333 287/333 288/333 289/333 290/333 291/333 292/333 293/333 294/333 295/333 296/333 297/333 298/333 299/333 300/333 301/333 302/333 303/333 304/333 305/333 306/333 307/333 308/333 309/333 310/333 311/333 312/333 313/333 314/333 315/333 316/333 317/333 318/333 319/333 320/333 321/333 322/333 323/333 324/333 325/333 326/333 327/333 328/333 329/333 330/333 331/333 332/333 333/333  [collapse]
HUGE STRUCT: SAVING CHUNK 2/7
  [save_struct] 65/333 66/333 67/333 68/333 69/333 70/333 71/333 72/333 73/333 74/333 75/333 76/333 77/333 78/333 79/333 80/333 81/333 82/333 83/333 84/333 85/333 86/333 87/333 88/333 89/333 90/333 91/333 92/333 93/333 94/333 95/333 96/333 97/333 98/333 99/333 100/333 101/333 102/333 103/333 104/333 105/333 106/333 107/333 108/333 109/333 110/333 111/333 112/333 113/333 114/333 115/333 116/333 117/333 118/333 119/333 120/333 121/333 122/333 123/333 124/333 125/333 126/333 127/333 128/333 129/333 130/333 131/333 132/333 133/333 134/333 135/333 136/333 137/333 138/333 139/333 140/333 141/333 142/333 143/333 144/333 145/333 146/333 147/333 148/333 149/333 150/333 151/333 152/333 153/333 154/333 155/333 156/333 157/333 158/333 159/333 160/333 161/333 162/333 163/333 164/333 165/333 166/333 167/333 168/333 169/333 170/333 171/333 172/333 173/333 174/333 175/333 176/333 177/333 178/333 179/333 180/333 181/333 182/333 183/333 184/333 185/333 186/333 187/333 188/333 189/333 190/333 191/333 192/333 193/333 194/333 195/333 196/333 197/333 198/333 199/333 200/333 201/333 202/333 203/333 204/333 205/333 206/333 207/333 208/333 209/333 210/333 211/333 212/333 213/333 214/333 215/333 216/333 217/333 218/333 219/333 220/333 221/333 222/333 223/333 224/333 225/333 226/333 227/333 228/333 229/333 230/333 231/333 232/333 233/333 234/333 235/333 236/333 237/333 238/333 239/333 240/333 241/333 242/333 243/333 244/333 245/333 246/333 247/333 248/333 249/333 250/333 251/333 252/333 253/333 254/333 255/333 256/333 257/333 258/333 259/333 260/333 261/333 262/333 263/333 264/333 265/333 266/333 267/333 268/333 269/333 270/333 271/333 272/333 273/333 274/333 275/333 276/333 277/333 278/333 279/333 280/333 281/333 282/333 283/333 284/333 285/333 286/333 287/333 288/333 289/333 290/333 291/333 292/333 293/333 294/333 295/333 296/333 297/333 298/333 299/333 300/333 301/333 302/333 303/333 304/333 305/333 306/333 307/333 308/333 309/333 310/333 311/333 312/333 313/333 314/333 315/333 316/333 317/333 318/333 319/333 320/333 321/333 322/333 323/333 324/333 325/333 326/333 327/333 328/333 329/333 330/333 331/333 332/333 333/333  [collapse]
HUGE STRUCT: SAVING CHUNK 3/7
  [save_struct] 65/333 66/333 67/333 68/333 69/333 70/333 71/333 72/333 73/333 74/333 75/333 76/333 77/333 78/333 79/333 80/333 81/333 82/333 83/333 84/333 85/333 86/333 87/333 88/333 89/333 90/333 91/333 92/333 93/333 94/333 95/333 96/333 97/333 98/333 99/333 100/333 101/333 102/333 103/333 104/333 105/333 106/333 107/333 108/333 109/333 110/333 111/333 112/333 113/333 114/333 115/333 116/333 117/333 118/333 119/333 120/333 121/333 122/333 123/333 124/333 125/333 126/333 127/333 128/333 129/333 130/333 131/333 132/333 133/333 134/333 135/333 136/333 137/333 138/333 139/333 140/333 141/333 142/333 143/333 144/333 145/333 146/333 147/333 148/333 149/333 150/333 151/333 152/333 153/333 154/333 155/333 156/333 157/333 158/333 159/333 160/333 161/333 162/333 163/333 164/333 165/333 166/333 167/333 168/333 169/333 170/333 171/333 172/333 173/333 174/333 175/333 176/333 177/333 178/333 179/333 180/333 181/333 182/333 183/333 184/333 185/333 186/333 187/333 188/333 189/333 190/333 191/333 192/333 193/333 194/333 195/333 196/333 197/333 198/333 199/333 200/333 201/333 202/333 203/333 204/333 205/333 206/333 207/333 208/333 209/333 210/333 211/333 212/333 213/333 214/333 215/333 216/333 217/333 218/333 219/333 220/333 221/333 222/333 223/333 224/333 225/333 226/333 227/333 228/333 229/333 230/333 231/333 232/333 233/333 234/333 235/333 236/333 237/333 238/333 239/333 240/333 241/333 242/333 243/333 244/333 245/333 246/333 247/333 248/333 249/333 250/333 251/333 252/333 253/333 254/333 255/333 256/333 257/333 258/333 259/333 260/333 261/333 262/333 263/333 264/333 265/333 266/333 267/333 268/333 269/333 270/333 271/333 272/333 273/333 274/333 275/333 276/333 277/333 278/333 279/333 280/333 281/333 282/333 283/333 284/333 285/333 286/333 287/333 288/333 289/333 290/333 291/333 292/333 293/333 294/333 295/333 296/333 297/333 298/333 299/333 300/333 301/333 302/333 303/333 304/333 305/333 306/333 307/333 308/333 309/333 310/333 311/333 312/333 313/333 314/333 315/333 316/333 317/333 318/333 319/333 320/333 321/333 322/333 323/333 324/333 325/333 326/333 327/333 328/333 329/333 330/333 331/333 332/333 333/333  [collapse]
HUGE STRUCT: SAVING CHUNK 4/7
  [save_struct] 63/333 64/333 65/333 66/333 67/333 68/333 69/333 70/333 71/333 72/333 73/333 74/333 75/333 76/333 77/333 78/333 79/333 80/333 81/333 82/333 83/333 84/333 85/333 86/333 87/333 88/333 89/333 90/333 91/333 92/333 93/333 94/333 95/333 96/333 97/333 98/333 99/333 100/333 101/333 102/333 103/333 104/333 105/333 106/333 107/333 108/333 109/333 110/333 111/333 112/333 113/333 114/333 115/333 116/333 117/333 118/333 119/333 120/333 121/333 122/333 123/333 124/333 125/333 126/333 127/333 128/333 129/333 130/333 131/333 132/333 133/333 134/333 135/333 136/333 137/333 138/333 139/333 140/333 141/333 142/333 143/333 144/333 145/333 146/333 147/333 148/333 149/333 150/333 151/333 152/333 153/333 154/333 155/333 156/333 157/333 158/333 159/333 160/333 161/333 162/333 163/333 164/333 165/333 166/333 167/333 168/333 169/333 170/333 171/333 172/333 173/333 174/333 175/333 176/333 177/333 178/333 179/333 180/333 181/333 182/333 183/333 184/333 185/333 186/333 187/333 188/333 189/333 190/333 191/333 192/333 193/333 194/333 195/333 196/333 197/333 198/333 199/333 200/333 201/333 202/333 203/333 204/333 205/333 206/333 207/333 208/333 209/333 210/333 211/333 212/333 213/333 214/333 215/333 216/333 217/333 218/333 219/333 220/333 221/333 222/333 223/333 224/333 225/333 226/333 227/333 228/333 229/333 230/333 231/333 232/333 233/333 234/333 235/333 236/333 237/333 238/333 239/333 240/333 241/333 242/333 243/333 244/333 245/333 246/333 247/333 248/333 249/333 250/333 251/333 252/333 253/333 254/333 255/333 256/333 257/333 258/333 259/333 260/333 261/333 262/333 263/333 264/333 265/333 266/333 267/333 268/333 269/333 270/333 271/333 272/333 273/333 274/333 275/333 276/333 277/333 278/333 279/333 280/333 281/333 282/333 283/333 284/333 285/333 286/333 287/333 288/333 289/333 290/333 291/333 292/333 293/333 294/333 295/333 296/333 297/333 298/333 299/333 300/333 301/333 302/333 303/333 304/333 305/333 306/333 307/333 308/333 309/333 310/333 311/333 312/333 313/333 314/333 315/333 316/333 317/333 318/333 319/333 320/333 321/333 322/333 323/333 324/333 325/333 326/333 327/333 328/333 329/333 330/333 331/333 332/333 333/333  [collapse]
HUGE STRUCT: SAVING CHUNK 5/7
  [save_struct] 64/333 65/333 66/333 67/333 68/333 69/333 70/333 71/333 72/333 73/333 74/333 75/333 76/333 77/333 78/333 79/333 80/333 81/333 82/333 83/333 84/333 85/333 86/333 87/333 88/333 89/333 90/333 91/333 92/333 93/333 94/333 95/333 96/333 97/333 98/333 99/333 100/333 101/333 102/333 103/333 104/333 105/333 106/333 107/333 108/333 109/333 110/333 111/333 112/333 113/333 114/333 115/333 116/333 117/333 118/333 119/333 120/333 121/333 122/333 123/333 124/333 125/333 126/333 127/333 128/333 129/333 130/333 131/333 132/333 133/333 134/333 135/333 136/333 137/333 138/333 139/333 140/333 141/333 142/333 143/333 144/333 145/333 146/333 147/333 148/333 149/333 150/333 151/333 152/333 153/333 154/333 155/333 156/333 157/333 158/333 159/333 160/333 161/333 162/333 163/333 164/333 165/333 166/333 167/333 168/333 169/333 170/333 171/333 172/333 173/333 174/333 175/333 176/333 177/333 178/333 179/333 180/333 181/333 182/333 183/333 184/333 185/333 186/333 187/333 188/333 189/333 190/333 191/333 192/333 193/333 194/333 195/333 196/333 197/333 198/333 199/333 200/333 201/333 202/333 203/333 204/333 205/333 206/333 207/333 208/333 209/333 210/333 211/333 212/333 213/333 214/333 215/333 216/333 217/333 218/333 219/333 220/333 221/333 222/333 223/333 224/333 225/333 226/333 227/333 228/333 229/333 230/333 231/333 232/333 233/333 234/333 235/333 236/333 237/333 238/333 239/333 240/333 241/333 242/333 243/333 244/333 245/333 246/333 247/333 248/333 249/333 250/333 251/333 252/333 253/333 254/333 255/333 256/333 257/333 258/333 259/333 260/333 261/333 262/333 263/333 264/333 265/333 266/333 267/333 268/333 269/333 270/333 271/333 272/333 273/333 274/333 275/333 276/333 277/333 278/333 279/333 280/333 281/333 282/333 283/333 284/333 285/333 286/333 287/333 288/333 289/333 290/333 291/333 292/333 293/333 294/333 295/333 296/333 297/333 298/333 299/333 300/333 301/333 302/333 303/333 304/333 305/333 306/333 307/333 308/333 309/333 310/333 311/333 312/333 313/333 314/333 315/333 316/333 317/333 318/333 319/333 320/333 321/333 322/333 323/333 324/333 325/333 326/333 327/333 328/333 329/333 330/333 331/333 332/333 333/333  [collapse]
HUGE STRUCT: SAVING CHUNK 6/7
  [save_struct] 61/333 62/333 63/333 64/333 65/333 66/333 67/333 68/333 69/333 70/333 71/333 72/333 73/333 74/333 75/333 76/333 77/333 78/333 79/333 80/333 81/333 82/333 83/333 84/333 85/333 86/333 87/333 88/333 89/333 90/333 91/333 92/333 93/333 94/333 95/333 96/333 97/333 98/333 99/333 100/333 101/333 102/333 103/333 104/333 105/333 106/333 107/333 108/333 109/333 110/333 111/333 112/333 113/333 114/333 115/333 116/333 117/333 118/333 119/333 120/333 121/333 122/333 123/333 124/333 125/333 126/333 127/333 128/333 129/333 130/333 131/333 132/333 133/333 134/333 135/333 136/333 137/333 138/333 139/333 140/333 141/333 142/333 143/333 144/333 145/333 146/333 147/333 148/333 149/333 150/333 151/333 152/333 153/333 154/333 155/333 156/333 157/333 158/333 159/333 160/333 161/333 162/333 163/333 164/333 165/333 166/333 167/333 168/333 169/333 170/333 171/333 172/333 173/333 174/333 175/333 176/333 177/333 178/333 179/333 180/333 181/333 182/333 183/333 184/333 185/333 186/333 187/333 188/333 189/333 190/333 191/333 192/333 193/333 194/333 195/333 196/333 197/333 198/333 199/333 200/333 201/333 202/333 203/333 204/333 205/333 206/333 207/333 208/333 209/333 210/333 211/333 212/333 213/333 214/333 215/333 216/333 217/333 218/333 219/333 220/333 221/333 222/333 223/333 224/333 225/333 226/333 227/333 228/333 229/333 230/333 231/333 232/333 233/333 234/333 235/333 236/333 237/333 238/333 239/333 240/333 241/333 242/333 243/333 244/333 245/333 246/333 247/333 248/333 249/333 250/333 251/333 252/333 253/333 254/333 255/333 256/333 257/333 258/333 259/333 260/333 261/333 262/333 263/333 264/333 265/333 266/333 267/333 268/333 269/333 270/333 271/333 272/333 273/333 274/333 275/333 276/333 277/333 278/333 279/333 280/333 281/333 282/333 283/333 284/333 285/333 286/333 287/333 288/333 289/333 290/333 291/333 292/333 293/333 294/333 295/333 296/333 297/333 298/333 299/333 300/333 301/333 302/333 303/333 304/333 305/333 306/333 307/333 308/333 309/333 310/333 311/333 312/333 313/333 314/333 315/333 316/333 317/333 318/333 319/333 320/333 321/333 322/333 323/333 324/333 325/333 326/333 327/333 328/333 329/333 330/333 331/333 332/333 333/333  [collapse]
HUGE STRUCT: SAVING CHUNK 7/7
  [save_struct] 331/333 332/333 333/333  [collapse]
Outputting gene_sample_coverage_table: ./THCA.per_gene.coverage.txt
  [save_struct] 99/331 100/331 101/331 102/331 103/331 104/331 105/331 106/331 107/331 108/331 109/331 110/331 111/331 112/331 113/331 114/331 115/331 116/331 117/331 118/331 119/331 120/331 121/331 122/331 123/331 124/331 125/331 126/331 127/331 128/331 129/331 130/331 131/331 132/331 133/331 134/331 135/331 136/331 137/331 138/331 139/331 140/331 141/331 142/331 143/331 144/331 145/331 146/331 147/331 148/331 149/331 150/331 151/331 152/331 153/331 154/331 155/331 156/331 157/331 158/331 159/331 160/331 161/331 162/331 163/331 164/331 165/331 166/331 167/331 168/331 169/331 170/331 171/331 172/331 173/331 174/331 175/331 176/331 177/331 178/331 179/331 180/331 181/331 182/331 183/331 184/331 185/331 186/331 187/331 188/331 189/331 190/331 191/331 192/331 193/331 194/331 195/331 196/331 197/331 198/331 199/331 200/331 201/331 202/331 203/331 204/331 205/331 206/331 207/331 208/331 209/331 210/331 211/331 212/331 213/331 214/331 215/331 216/331 217/331 218/331 219/331 220/331 221/331 222/331 223/331 224/331 225/331 226/331 227/331 228/331 229/331 230/331 231/331 232/331 233/331 234/331 235/331 236/331 237/331 238/331 239/331 240/331 241/331 242/331 243/331 244/331 245/331 246/331 247/331 248/331 249/331 250/331 251/331 252/331 253/331 254/331 255/331 256/331 257/331 258/331 259/331 260/331 261/331 262/331 263/331 264/331 265/331 266/331 267/331 268/331 269/331 270/331 271/331 272/331 273/331 274/331 275/331 276/331 277/331 278/331 279/331 280/331 281/331 282/331 283/331 284/331 285/331 286/331 287/331 288/331 289/331 290/331 291/331 292/331 293/331 294/331 295/331 296/331 297/331 298/331 299/331 300/331 301/331 302/331 303/331 304/331 305/331 306/331 307/331 308/331 309/331 310/331 311/331 312/331 313/331 314/331 315/331 316/331 317/331 318/331 319/331 320/331 321/331 322/331 323/331 324/331 325/331 326/331 327/331 328/331 329/331 330/331 331/331  [collapse] [write]
Outputting gene_sample_mutation_counts_table: ./THCA.per_gene.mutation_counts.txt
  [save_struct] 114/331 115/331 116/331 117/331 118/331 119/331 120/331 121/331 122/331 123/331 124/331 125/331 126/331 127/331 128/331 129/331 130/331 131/331 132/331 133/331 134/331 135/331 136/331 137/331 138/331 139/331 140/331 141/331 142/331 143/331 144/331 145/331 146/331 147/331 148/331 149/331 150/331 151/331 152/331 153/331 154/331 155/331 156/331 157/331 158/331 159/331 160/331 161/331 162/331 163/331 164/331 165/331 166/331 167/331 168/331 169/331 170/331 171/331 172/331 173/331 174/331 175/331 176/331 177/331 178/331 179/331 180/331 181/331 182/331 183/331 184/331 185/331 186/331 187/331 188/331 189/331 190/331 191/331 192/331 193/331 194/331 195/331 196/331 197/331 198/331 199/331 200/331 201/331 202/331 203/331 204/331 205/331 206/331 207/331 208/331 209/331 210/331 211/331 212/331 213/331 214/331 215/331 216/331 217/331 218/331 219/331 220/331 221/331 222/331 223/331 224/331 225/331 226/331 227/331 228/331 229/331 230/331 231/331 232/331 233/331 234/331 235/331 236/331 237/331 238/331 239/331 240/331 241/331 242/331 243/331 244/331 245/331 246/331 247/331 248/331 249/331 250/331 251/331 252/331 253/331 254/331 255/331 256/331 257/331 258/331 259/331 260/331 261/331 262/331 263/331 264/331 265/331 266/331 267/331 268/331 269/331 270/331 271/331 272/331 273/331 274/331 275/331 276/331 277/331 278/331 279/331 280/331 281/331 282/331 283/331 284/331 285/331 286/331 287/331 288/331 289/331 290/331 291/331 292/331 293/331 294/331 295/331 296/331 297/331 298/331 299/331 300/331 301/331 302/331 303/331 304/331 305/331 306/331 307/331 308/331 309/331 310/331 311/331 312/331 313/331 314/331 315/331 316/331 317/331 318/331 319/331 320/331 321/331 322/331 323/331 324/331 325/331 326/331 327/331 328/331 329/331 330/331 331/331  [collapse] [write]
Mutation breakdown by type

           Frame_Shift_Del: [317]
           Frame_Shift_Ins: [121]
              In_Frame_Del: [117]
              In_Frame_Ins: [42]
         Missense_Mutation: [4159]
         Nonsense_Mutation: [194]
          Nonstop_Mutation: [4]
                    Silent: [1578]
               Splice_Site: [129]
    Translation_Start_Site: [8]
                 ----TOTAL: [6669]
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Gather job: collecting partial results

Running MutSig 2:
Gather job: collecting partial results
Outputting significance table: ./THCA.sig_genes.txt
Done
Mapping 640 genesets from /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt to list of project genes.
100/640 200/640 300/640 400/640 500/640 600/640 
Total of 616 genesets contain at least one project gene.
Finding number of unique sites, unique patients: 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients
Analyzing silent/nonsilent ratios
Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Calculating significance of each gene.
Using projection method.
In gene HISTONE_METHYLTRANSFERASE the following bins exceed PROBCAP:
    THCA-BJ-A0ZE-TP	categ 6	N = 181479  n = 1	mu =   9.96e-08
    THCA-DJ-A2PR-TP	categ 6	N = 176874  n = 1	mu =   1.72e-07
    THCA-EM-A3O9-TP	categ 6	N = 179308  n = 2	mu =   2.02e-07
In gene ALKALOID_BIOSYNTHESIS_II the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 9077    n = 1	mu =   6.92e-08
In gene ALKPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 51161   n = 1	mu =   1.07e-07
In gene APOPTOSIS the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 87683   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 83905   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 86194   n = 1	mu =   1.35e-07
    THCA-FE-A23A-TP	categ 6	N = 86014   n = 1	mu =   6.85e-08
In gene APOPTOSIS_GENMAPP the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 56707   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 54440   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 55926   n = 1	mu =   1.35e-07
In gene APOPTOSIS_KEGG the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 65614   n = 1	mu =   1.35e-07
In gene ARAPPATHWAY the following bins exceed PROBCAP:
    THCA-DO-A1K0-TP	categ 6	N = 23932   n = 1	mu =   3.48e-08
    THCA-EM-A3O8-TP	categ 6	N = 24321   n = 1	mu =   6.74e-08
In gene ARFPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 30865   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 29874   n = 1	mu =   2.41e-07
In gene ARGININE_AND_PROLINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 64985   n = 1	mu =   6.92e-08
In gene ATMPATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 24429   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 45000   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 44189   n = 1	mu =   2.41e-07
35	ATMPATHWAY	2.683916e-05
In gene ATP_SYNTHESIS the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 22189   n = 1	mu =   6.96e-08
In gene ATRBRCAPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 66199   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 65803   n = 1	mu =   2.41e-07
In gene BETA_ALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 43185   n = 1	mu =   6.92e-08
In gene BIOSYNTHESIS_OF_STEROIDS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 16099   n = 1	mu =   2.41e-07
61	CARDIACEGFPATHWAY	8.616675e-05
In gene CARM_ERPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 69573   n = 1	mu =   1.02e-07
In gene CASPASEPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 28807   n = 1	mu =   1.35e-07
In gene CDC25PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 11274   n = 1	mu =   1.36e-07
71	CDK5PATHWAY	2.919271e-06
In gene CELL_CYCLE_KEGG the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 164441  n = 1	mu =   1.02e-07
    THCA-DJ-A3UV-TP	categ 6	N = 165417  n = 1	mu =   1.01e-07
    THCA-EL-A3D5-TP	categ 6	N = 166902  n = 2	mu =   2.33e-07
    THCA-EL-A3H3-TP	categ 6	N = 163144  n = 1	mu =   6.83e-08
    THCA-EM-A1YB-TP	categ 6	N = 162387  n = 1	mu =   2.41e-07
In gene CHEMICALPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 41418   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 40783   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 41034   n = 1	mu =   1.35e-07
In gene CHOLESTEROL_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 19280   n = 1	mu =   2.41e-07
In gene CIRCADIAN_EXERCISE the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 53495   n = 1	mu =   6.96e-08
In gene CREBPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 43154   n = 1	mu =   2.06e-07
89	CREBPATHWAY	1.494676e-05
In gene D4GDIPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 19111   n = 1	mu =   1.35e-07
In gene DEATHPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 50187   n = 1	mu =   1.35e-07
In gene DNA_REPLICATION_REACTOME the following bins exceed PROBCAP:
    THCA-DJ-A3UV-TP	categ 6	N = 76084   n = 1	mu =   1.01e-07
    THCA-EL-A3D5-TP	categ 6	N = 76582   n = 1	mu =   2.33e-07
    THCA-EM-A3O9-TP	categ 6	N = 76916   n = 1	mu =   2.02e-07
108	EGFPATHWAY	5.999649e-05
In gene EIF2PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22K-TP	categ 6	N = 17377   n = 1	mu =   1.01e-07
In gene ERK5PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 28143   n = 1	mu =   2.06e-07
119	ERK5PATHWAY	5.751863e-06
In gene ERKPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 48668   n = 1	mu =   2.06e-07
120	ERKPATHWAY	1.465650e-05
In gene ETSPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 38491   n = 1	mu =   1.02e-07
123	ETSPATHWAY	2.654857e-06
In gene EXTRINSICPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 24461   n = 1	mu =   1.34e-07
In gene FASPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 59224   n = 1	mu =   6.83e-08
In gene FLAGELLAR_ASSEMBLY the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 22189   n = 1	mu =   6.96e-08
In gene G1_TO_S_CELL_CYCLE_REACTOME the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 117365  n = 2	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 113740  n = 1	mu =   2.41e-07
In gene G1PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 24045   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 45733   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 44311   n = 1	mu =   2.41e-07
In gene G2PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 34375   n = 1	mu =   1.36e-07
    THCA-DJ-A13L-TP	categ 6	N = 62232   n = 1	mu =   2.06e-07
    THCA-EL-A3D5-TP	categ 6	N = 62897   n = 1	mu =   2.33e-07
    THCA-EL-A3H3-TP	categ 6	N = 61252   n = 1	mu =   6.83e-08
    THCA-EM-A1YB-TP	categ 6	N = 61420   n = 1	mu =   2.41e-07
In gene G_PROTEIN_SIGNALING the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 175916  n = 1	mu =   1.34e-07
    THCA-EM-A22K-TP	categ 6	N = 175965  n = 1	mu =   1.01e-07
142	G_PROTEIN_SIGNALING	9.679847e-05
In gene GHPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 49244   n = 1	mu =   2.06e-07
In gene GLYCINE_SERINE_AND_THREONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 62153   n = 1	mu =   6.92e-08
In gene GPCRDB_CLASS_C_METABOTROPIC_GLUTAMATE_PHEROMONE the following bins exceed PROBCAP:
    THCA-ET-A3DT-TP	categ 5	N = 31142   n = 1	mu =   6.89e-08
In gene GPCRDB_OTHER the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 101222  n = 1	mu =   1.67e-07
In gene GSK3PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 43462   n = 1	mu =   1.07e-07
173	HBXPATHWAY	5.449956e-10
In gene HISTIDINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 36428   n = 1	mu =   6.92e-08
In gene HIVNEFPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 101457  n = 1	mu =   6.83e-08
    THCA-EM-A3O6-TP	categ 6	N = 104302  n = 1	mu =   1.35e-07
In gene HSA00020_CITRATE_CYCLE the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 44627   n = 1	mu =   2.35e-07
In gene HSA00100_BIOSYNTHESIS_OF_STEROIDS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 28473   n = 1	mu =   2.41e-07
In gene HSA00190_OXIDATIVE_PHOSPHORYLATION the following bins exceed PROBCAP:
    THCA-DJ-A2PY-TP	categ 6	N = 83268   n = 1	mu =   6.81e-08
    THCA-ET-A3BN-TP	categ 6	N = 81519   n = 1	mu =   6.96e-08
In gene HSA00220_UREA_CYCLE_AND_METABOLISM_OF_AMINO_GROUPS the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 43565   n = 1	mu =   6.92e-08
In gene HSA00240_PYRIMIDINE_METABOLISM the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 122056  n = 1	mu =   2.02e-07
In gene HSA00260_GLYCINE_SERINE_AND_THREONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 63206   n = 1	mu =   6.92e-08
In gene HSA00271_METHIONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-DJ-A2Q2-TP	categ 6	N = 30309   n = 1	mu =   1.04e-07
    THCA-FY-A3ON-TP	categ 6	N = 31135   n = 1	mu =   2.03e-07
In gene HSA00310_LYSINE_DEGRADATION the following bins exceed PROBCAP:
    THCA-DJ-A2PR-TP	categ 6	N = 85242   n = 1	mu =   1.72e-07
In gene HSA00340_HISTIDINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 58814   n = 1	mu =   6.92e-08
    THCA-EL-A3D5-TP	categ 6	N = 59967   n = 1	mu =   2.33e-07
In gene HSA00350_TYROSINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 88005   n = 1	mu =   6.92e-08
In gene HSA00360_PHENYLALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 50577   n = 1	mu =   6.92e-08
    THCA-EM-A2CL-TP	categ 6	N = 51239   n = 1	mu =   3.35e-08
In gene HSA00380_TRYPTOPHAN_METABOLISM the following bins exceed PROBCAP:
    THCA-ET-A2MZ-TP	categ 5	N = 88751   n = 1	mu =   1.04e-07
    THCA-BJ-A192-TP	categ 6	N = 89975   n = 1	mu =   6.92e-08
In gene HSA00410_BETA_ALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 40173   n = 1	mu =   6.92e-08
In gene HSA00450_SELENOAMINO_ACID_METABOLISM the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 37779   n = 1	mu =   1.33e-07
In gene HSA00521_STREPTOMYCIN_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-ET-A3BU-TP	categ 6	N = 17001   n = 1	mu =   3.49e-08
In gene HSA00562_INOSITOL_PHOSPHATE_METABOLISM the following bins exceed PROBCAP:
    THCA-ET-A3BU-TP	categ 6	N = 108703  n = 1	mu =   3.49e-08
In gene HSA00620_PYRUVATE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 70654   n = 1	mu =   1.33e-07
In gene HSA00670_ONE_CARBON_POOL_BY_FOLATE the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 28493   n = 1	mu =   1.66e-07
    THCA-DJ-A13L-TP	categ 6	N = 28118   n = 1	mu =   2.06e-07
In gene HSA00680_METHANE_METABOLISM the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 17197   n = 1	mu =   2.06e-07
    THCA-EM-A2CL-TP	categ 6	N = 17526   n = 1	mu =   3.35e-08
In gene HSA00900_TERPENOID_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 6304    n = 1	mu =   2.41e-07
In gene HSA00920_SULFUR_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 14108   n = 1	mu =   1.33e-07
In gene HSA00940_PHENYLPROPANOID_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 12728   n = 1	mu =   3.35e-08
In gene HSA00960_ALKALOID_BIOSYNTHESIS_II the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 37646   n = 1	mu =   6.92e-08
In gene HSA02010_ABC_TRANSPORTERS_GENERAL the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 178729  n = 1	mu =   2.33e-07
    THCA-EM-A2P0-TP	categ 6	N = 178806  n = 1	mu =   6.65e-08
In gene HSA03030_DNA_POLYMERASE the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 61654   n = 1	mu =   2.02e-07
In gene HSA04010_MAPK_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 5	N = 425786  n = 2	mu =   1.70e-07
    THCA-EM-A22L-TP	categ 5	N = 433158  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 418273  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 439224  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 419579  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 409810  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 397483  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 409710  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 406318  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 423948  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 418358  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 423182  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 411433  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 414212  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 399038  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 434053  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 404230  n = 1	mu =   7.09e-08
    THCA-EL-A3D5-TP	categ 6	N = 437750  n = 1	mu =   2.33e-07
    THCA-EM-A1CW-TP	categ 6	N = 419567  n = 1	mu =   1.37e-07
    THCA-EM-A1YB-TP	categ 6	N = 417926  n = 1	mu =   2.41e-07
    THCA-ET-A25O-TP	categ 6	N = 423592  n = 1	mu =   6.82e-08
306	HSA04010_MAPK_SIGNALING_PATHWAY	1.443290e-15
In gene HSA04012_ERBB_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 155164  n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 154872  n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 156383  n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 149850  n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 154525  n = 1	mu =   1.70e-07
    THCA-EM-A22L-TP	categ 5	N = 155554  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 151437  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 156317  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 150798  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 149573  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 146655  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 149893  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 150550  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 153609  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 152513  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 153367  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 150241  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 151680  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 146751  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 155429  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 148314  n = 1	mu =   7.09e-08
307	HSA04012_ERBB_SIGNALING_PATHWAY	4.551914e-15
In gene HSA04020_CALCIUM_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 411544  n = 1	mu =   1.67e-07
In gene HSA04060_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 265560  n = 1	mu =   2.02e-07
In gene HSA04080_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION the following bins exceed PROBCAP:
    THCA-ET-A3DT-TP	categ 5	N = 327399  n = 1	mu =   6.89e-08
    THCA-FY-A3R6-TP	categ 6	N = 334612  n = 1	mu =   1.67e-07
In gene HSA04110_CELL_CYCLE the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 203125  n = 1	mu =   1.02e-07
    THCA-DJ-A3UV-TP	categ 6	N = 203669  n = 1	mu =   1.01e-07
    THCA-EL-A3CW-TP	categ 6	N = 203508  n = 1	mu =   1.02e-07
    THCA-EL-A3D5-TP	categ 6	N = 205346  n = 2	mu =   2.33e-07
    THCA-EL-A3H3-TP	categ 6	N = 201339  n = 1	mu =   6.83e-08
    THCA-EM-A1YB-TP	categ 6	N = 200079  n = 1	mu =   2.41e-07
In gene HSA04115_P53_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 99379   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 96390   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 98335   n = 1	mu =   1.35e-07
    THCA-ET-A3BW-TP	categ 6	N = 97160   n = 1	mu =   6.84e-08
In gene HSA04130_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 24724   n = 1	mu =   2.41e-07
In gene HSA04150_MTOR_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 81086   n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 80595   n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 81220   n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 77107   n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 79348   n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 77684   n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 81452   n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 76531   n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 76778   n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 75272   n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 76851   n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 76515   n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 79178   n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 78198   n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 78628   n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 76700   n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 77215   n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 75311   n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 80568   n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 74497   n = 1	mu =   7.09e-08
    THCA-DJ-A13L-TP	categ 6	N = 79024   n = 1	mu =   2.06e-07
317	HSA04150_MTOR_SIGNALING_PATHWAY	1.776357e-15
In gene HSA04210_APOPTOSIS the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 126382  n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 122854  n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 125657  n = 1	mu =   1.35e-07
In gene HSA04320_DORSO_VENTRAL_AXIS_FORMATION the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 79257   n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 78901   n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 79553   n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 75009   n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 78593   n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 77592   n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 80097   n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 77806   n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 75509   n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 73111   n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 74961   n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 74953   n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 76923   n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 76417   n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 77742   n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 76581   n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 76780   n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 73516   n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 79255   n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 75361   n = 1	mu =   7.09e-08
320	HSA04320_DORSO_VENTRAL_AXIS_FORMATION	2.886580e-15
In gene HSA04330_NOTCH_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 102659  n = 1	mu =   1.02e-07
In gene HSA04340_HEDGEHOG_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 90923   n = 1	mu =   2.03e-07
In gene HSA04350_TGF_BETA_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-ET-A3BO-TP	categ 6	N = 144391  n = 1	mu =   1.40e-07
In gene HSA04360_AXON_GUIDANCE the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 298798  n = 1	mu =   1.34e-07
    THCA-FE-A234-TP	categ 5	N = 285378  n = 1	mu =   2.44e-07
    THCA-GE-A2C6-TP	categ 5	N = 283782  n = 1	mu =   7.09e-08
    THCA-EM-A2CQ-TP	categ 6	N = 301062  n = 1	mu =   3.34e-08
In gene HSA04370_VEGF_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 109295  n = 1	mu =   1.34e-07
325	HSA04370_VEGF_SIGNALING_PATHWAY	1.201845e-08
In gene HSA04510_FOCAL_ADHESION the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 561248  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 548064  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 563960  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 538624  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 541148  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 527159  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 539532  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 535673  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 550244  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 545747  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 550724  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 535713  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 542954  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 527381  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 557430  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 532669  n = 1	mu =   7.09e-08
    THCA-ET-A3BO-TP	categ 6	N = 539532  n = 1	mu =   1.40e-07
    THCA-FY-A3R6-TP	categ 6	N = 562818  n = 1	mu =   1.67e-07
326	HSA04510_FOCAL_ADHESION	1.076916e-14
In gene HSA04512_ECM_RECEPTOR_INTERACTION the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 340050  n = 1	mu =   1.67e-07
In gene HSA04530_TIGHT_JUNCTION the following bins exceed PROBCAP:
    THCA-EM-A2CU-TP	categ 6	N = 276295  n = 1	mu =   1.08e-07
In gene HSA04540_GAP_JUNCTION the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 198755  n = 1	mu =   1.34e-07
In gene HSA04620_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FE-A23A-TP	categ 6	N = 133645  n = 1	mu =   6.85e-08
In gene HSA04630_JAK_STAT_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 218047  n = 1	mu =   2.02e-07
In gene HSA04650_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 171320  n = 2	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 173052  n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 166088  n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 170317  n = 1	mu =   1.70e-07
    THCA-EM-A22L-TP	categ 5	N = 171675  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 166025  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 172727  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 164740  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 166182  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 162652  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 166259  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 165438  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 169624  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 165964  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 169530  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 166377  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 165161  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 162286  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 169559  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 164716  n = 1	mu =   7.09e-08
    THCA-FY-A3RA-TP	categ 6	N = 168879  n = 1	mu =   2.02e-07
338	HSA04650_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY	3.330669e-16
In gene HSA04660_T_CELL_RECEPTOR_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 152813  n = 1	mu =   1.34e-07
339	HSA04660_T_CELL_RECEPTOR_SIGNALING_PATHWAY	1.158106e-07
In gene HSA04662_B_CELL_RECEPTOR_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 112427  n = 1	mu =   1.34e-07
340	HSA04662_B_CELL_RECEPTOR_SIGNALING_PATHWAY	4.488748e-08
In gene HSA04664_FC_EPSILON_RI_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 108325  n = 1	mu =   1.34e-07
    THCA-H2-A26U-TP	categ 6	N = 109624  n = 1	mu =   9.95e-08
341	HSA04664_FC_EPSILON_RI_SIGNALING_PATHWAY	8.050242e-07
In gene HSA04720_LONG_TERM_POTENTIATION the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 150605  n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 149914  n = 2	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 152177  n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 144776  n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 148224  n = 1	mu =   1.70e-07
    THCA-EM-A22L-TP	categ 5	N = 149844  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 145516  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 151780  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 143757  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 144340  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 141470  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 144877  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 144019  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 147461  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 146859  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 147322  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 140840  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 143581  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 141362  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 150056  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 140718  n = 1	mu =   7.09e-08
    THCA-DJ-A13L-TP	categ 6	N = 148174  n = 1	mu =   2.06e-07
344	HSA04720_LONG_TERM_POTENTIATION	5.329071e-15
In gene HSA04730_LONG_TERM_DEPRESSION the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 166431  n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 165792  n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 167267  n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 160009  n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 164208  n = 1	mu =   1.70e-07
    THCA-EM-A22L-TP	categ 5	N = 165853  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 162658  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 168496  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 161178  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 160329  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 155889  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 159693  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 159274  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 163451  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 162364  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 163190  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 156660  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 159362  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 156818  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 166344  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 157347  n = 1	mu =   7.09e-08
345	HSA04730_LONG_TERM_DEPRESSION	1.221245e-15
In gene HSA04810_REGULATION_OF_ACTIN_CYTOSKELETON the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 418038  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 406217  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 422272  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 402390  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 401000  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 391766  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 401093  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 399086  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 410620  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 406951  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 410441  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 400178  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 404087  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 392022  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 417783  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 395993  n = 1	mu =   7.09e-08
    THCA-EL-A3CX-TP	categ 6	N = 389845  n = 1	mu =   1.07e-07
348	HSA04810_REGULATION_OF_ACTIN_CYTOSKELETON	4.218847e-15
In gene HSA04910_INSULIN_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2PN-TP	categ 5	N = 231525  n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 238466  n = 1	mu =   1.70e-07
    THCA-EM-A22L-TP	categ 5	N = 242799  n = 1	mu =   1.34e-07
    THCA-EM-A2OX-TP	categ 5	N = 235305  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 245198  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 237060  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 230829  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 226666  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 231697  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 230729  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 237488  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 235592  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 238013  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 232963  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 235617  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 225997  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 243957  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 232221  n = 1	mu =   7.09e-08
    THCA-DJ-A2QB-TP	categ 6	N = 224499  n = 1	mu =   1.44e-07
    THCA-EL-A3CM-TP	categ 6	N = 227834  n = 1	mu =   1.06e-07
349	HSA04910_INSULIN_SIGNALING_PATHWAY	3.552714e-15
In gene HSA04912_GNRH_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 191898  n = 1	mu =   1.34e-07
350	HSA04912_GNRH_SIGNALING_PATHWAY	1.070957e-06
In gene HSA04916_MELANOGENESIS the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 164782  n = 1	mu =   1.34e-07
In gene HSA05120_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 102699  n = 1	mu =   6.96e-08
In gene HSP27PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 17022   n = 1	mu =   1.35e-07
In gene IFNGPATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 12378   n = 1	mu =   2.02e-07
371	IL2PATHWAY	2.714394e-07
In gene INTRINSICPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 66583   n = 1	mu =   1.34e-07
395	LONGEVITYPATHWAY	5.807829e-09
In gene MAPKPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 144469  n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 143497  n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 145543  n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 136147  n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 142168  n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 139039  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 146068  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 138522  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 137326  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 133863  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 135972  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 136145  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 140595  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 139194  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 140441  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 135709  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 137141  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 134583  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 143719  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 134932  n = 1	mu =   7.09e-08
    THCA-DJ-A13L-TP	categ 6	N = 139991  n = 1	mu =   2.06e-07
400	MAPKPATHWAY	3.885781e-15
In gene MEF2DPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 36458   n = 1	mu =   1.02e-07
In gene METHANE_METABOLISM the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 17883   n = 1	mu =   3.35e-08
In gene METHIONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-DJ-A2Q2-TP	categ 6	N = 25430   n = 1	mu =   1.04e-07
    THCA-FY-A3ON-TP	categ 6	N = 26031   n = 1	mu =   2.03e-07
In gene MITOCHONDRIAPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 20220   n = 1	mu =   1.35e-07
In gene MPRPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 30146   n = 1	mu =   2.06e-07
412	MPRPATHWAY	4.640232e-07
In gene MRNA_PROCESSING_REACTOME the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 159197  n = 1	mu =   2.33e-07
    THCA-EL-A3GO-TP	categ 6	N = 158772  n = 1	mu =   1.02e-07
    THCA-ET-A3BN-TP	categ 6	N = 155562  n = 1	mu =   6.96e-08
    THCA-FY-A3ON-TP	categ 6	N = 158187  n = 1	mu =   2.03e-07
In gene MRPPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 21400   n = 1	mu =   2.33e-07
426	NGFPATHWAY	9.248265e-08
In gene NKTPATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 30194   n = 1	mu =   2.02e-07
In gene NO1PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A2CU-TP	categ 6	N = 55319   n = 1	mu =   1.08e-07
In gene ONE_CARBON_POOL_BY_FOLATE the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 26940   n = 1	mu =   1.66e-07
    THCA-DJ-A13L-TP	categ 6	N = 26532   n = 1	mu =   2.06e-07
In gene OXIDATIVE_PHOSPHORYLATION the following bins exceed PROBCAP:
    THCA-EL-A3GR-TP	categ 6	N = 57748   n = 1	mu =   9.98e-08
    THCA-ET-A3BN-TP	categ 6	N = 56076   n = 1	mu =   6.96e-08
In gene P53HYPOXIAPATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 16689   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 31173   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 30813   n = 1	mu =   2.41e-07
In gene P53PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 14943   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 27299   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 26595   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 27299   n = 1	mu =   1.35e-07
In gene PHENYLALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 32402   n = 1	mu =   6.92e-08
    THCA-EM-A2CL-TP	categ 6	N = 32889   n = 1	mu =   3.35e-08
In gene PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 167722  n = 1	mu =   2.06e-07
In gene PHOTOSYNTHESIS the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 23537   n = 1	mu =   6.96e-08
In gene PITX2PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 47531   n = 1	mu =   1.07e-07
In gene PLK3PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 14048   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 23975   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 23957   n = 1	mu =   2.41e-07
468	PLK3PATHWAY	4.762940e-05
In gene PMLPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 28884   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 27743   n = 1	mu =   2.41e-07
469	PMLPATHWAY	1.950537e-05
In gene PROSTAGLANDIN_AND_LEUKOTRIENE_METABOLISM the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 42259   n = 1	mu =   3.35e-08
In gene PS1PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 28840   n = 1	mu =   1.07e-07
In gene PYRUVATE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 55824   n = 1	mu =   1.33e-07
In gene RBPATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 14403   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 26367   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 26083   n = 1	mu =   2.41e-07
494	RECKPATHWAY	3.874120e-08
In gene RIBOSOMAL_PROTEINS the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 78178   n = 1	mu =   2.06e-07
In gene RNAPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 14653   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 14221   n = 1	mu =   2.41e-07
In gene S1PPATHWAY the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 17573   n = 1	mu =   2.44e-07
    THCA-BJ-A28R-TP	categ 6	N = 18118   n = 1	mu =   6.72e-08
In gene SA_B_CELL_RECEPTOR_COMPLEXES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 47112   n = 1	mu =   2.06e-07
In gene SA_CASPASE_CASCADE the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 27011   n = 1	mu =   1.35e-07
In gene SA_G1_AND_S_PHASES the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 12925   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 12247   n = 1	mu =   2.41e-07
In gene SA_PROGRAMMED_CELL_DEATH the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 16916   n = 1	mu =   1.35e-07
516	SA_TRKA_RECEPTOR	1.426465e-05
In gene SELENOAMINO_ACID_METABOLISM the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 18720   n = 1	mu =   1.33e-07
In gene SHHPATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 24893   n = 1	mu =   2.03e-07
In gene SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 88696   n = 1	mu =   2.06e-07
    THCA-EL-A3CM-TP	categ 6	N = 85912   n = 1	mu =   1.06e-07
    THCA-EL-A3CW-TP	categ 6	N = 88647   n = 1	mu =   1.02e-07
In gene SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 82564   n = 1	mu =   2.06e-07
In gene SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 114934  n = 1	mu =   2.06e-07
    THCA-EL-A3CM-TP	categ 6	N = 111212  n = 1	mu =   1.06e-07
    THCA-EL-A3CW-TP	categ 6	N = 115331  n = 1	mu =   1.02e-07
535	SPPAPATHWAY	9.208665e-05
In gene ST_ADRENERGIC the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 80392   n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 80348   n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 81354   n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 77844   n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 79845   n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 78588   n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 81160   n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 76772   n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 78118   n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 76677   n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 77607   n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 78172   n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 79471   n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 78967   n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 79456   n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 76434   n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 77415   n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 76606   n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 80441   n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 76231   n = 1	mu =   7.09e-08
    THCA-DJ-A2QB-TP	categ 6	N = 76758   n = 1	mu =   1.44e-07
    THCA-EL-A3CX-TP	categ 6	N = 76378   n = 1	mu =   1.07e-07
538	ST_ADRENERGIC	0
In gene ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 77583   n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 77462   n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 78855   n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 73986   n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 77086   n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 75140   n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 78363   n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 75316   n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 73915   n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 72247   n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 73728   n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 73750   n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 76091   n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 75643   n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 76171   n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 74329   n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 74660   n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 71751   n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 78083   n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 73642   n = 1	mu =   7.09e-08
541	ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS	9.992007e-16
In gene ST_ERK1_ERK2_MAPK_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 44451   n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 44557   n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 44714   n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 43145   n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 44196   n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 43500   n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 44787   n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 42453   n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 43394   n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 42559   n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 43427   n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 43071   n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 43700   n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 43428   n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 43689   n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 42664   n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 43145   n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 42661   n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 44348   n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 41953   n = 1	mu =   7.09e-08
    THCA-DJ-A13L-TP	categ 6	N = 43982   n = 1	mu =   2.06e-07
542	ST_ERK1_ERK2_MAPK_PATHWAY	1.443290e-15
In gene ST_FAS_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 110795  n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 107276  n = 1	mu =   2.41e-07
In gene ST_G_ALPHA_I_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 88412   n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 88256   n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 88731   n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 85117   n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 87185   n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 86148   n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 88897   n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 83333   n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 86158   n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 83887   n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 85363   n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 85420   n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 86424   n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 86158   n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 86700   n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 83485   n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 85004   n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 84584   n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 87449   n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 82567   n = 1	mu =   7.09e-08
544	ST_G_ALPHA_I_PATHWAY	1.665335e-15
In gene ST_G_ALPHA_S_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 16894   n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 16755   n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 17116   n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 16142   n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 16562   n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 15823   n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 16694   n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 15336   n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 16148   n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 15787   n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 16112   n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 16111   n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 16272   n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 16162   n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 15706   n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 15397   n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 15142   n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 15598   n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 16574   n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 15027   n = 1	mu =   7.09e-08
545	ST_G_ALPHA_S_PATHWAY	1.110223e-15
In gene ST_GA13_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 70164   n = 1	mu =   1.44e-07
In gene ST_GAQ_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 63705   n = 1	mu =   1.44e-07
In gene ST_GRANULE_CELL_SURVIVAL_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 40092   n = 1	mu =   1.07e-07
In gene ST_INTEGRIN_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2PN-TP	categ 5	N = 177385  n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 182566  n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 180351  n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 186536  n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 175657  n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 178765  n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 174444  n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 178386  n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 176930  n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 181383  n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 180240  n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 181553  n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 176893  n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 179056  n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 175329  n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 184264  n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 174363  n = 1	mu =   7.09e-08
551	ST_INTEGRIN_SIGNALING_PATHWAY	2.331468e-15
In gene ST_INTERFERON_GAMMA_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 17387   n = 1	mu =   2.02e-07
In gene ST_JNK_MAPK_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 76212   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 73938   n = 1	mu =   2.41e-07
In gene ST_MYOCYTE_AD_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 64850   n = 1	mu =   1.07e-07
In gene ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 54062   n = 1	mu =   2.06e-07
    THCA-EL-A3CW-TP	categ 6	N = 54066   n = 1	mu =   1.02e-07
In gene ST_WNT_BETA_CATENIN_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 56085   n = 1	mu =   1.07e-07
    THCA-FY-A3ON-TP	categ 6	N = 60649   n = 1	mu =   2.03e-07
In gene STATIN_PATHWAY_PHARMGKB the following bins exceed PROBCAP:
    THCA-FE-A235-TP	categ 6	N = 40878   n = 1	mu =   1.02e-07
    THCA-FY-A3ON-TP	categ 6	N = 40636   n = 1	mu =   2.03e-07
In gene STILBENE_COUMARINE_AND_LIGNIN_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 14655   n = 1	mu =   3.35e-08
In gene SULFUR_METABOLISM the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 9136    n = 1	mu =   1.33e-07
    THCA-BJ-A0Z2-TP	categ 6	N = 9136    n = 1	mu =   1.33e-07
In gene TELPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 42637   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 41685   n = 1	mu =   2.41e-07
In gene TERPENOID_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 4693    n = 1	mu =   2.41e-07
In gene TERTPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 10643   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 10466   n = 1	mu =   2.41e-07
In gene TGFBPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 37630   n = 1	mu =   1.07e-07
In gene TH1TH2PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 19015   n = 1	mu =   2.02e-07
In gene TIDPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 27624   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 26538   n = 1	mu =   2.41e-07
    THCA-FY-A3RA-TP	categ 6	N = 27341   n = 1	mu =   2.02e-07
In gene TNFR1PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 56587   n = 1	mu =   6.83e-08
598	TRKAPATHWAY	6.902093e-08
In gene TRYPTOPHAN_METABOLISM the following bins exceed PROBCAP:
    THCA-ET-A2MZ-TP	categ 5	N = 81297   n = 1	mu =   1.04e-07
    THCA-BJ-A192-TP	categ 6	N = 81687   n = 1	mu =   6.92e-08
In gene TYPE_III_SECRETION_SYSTEM the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 22189   n = 1	mu =   6.96e-08
In gene TYROSINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 46869   n = 1	mu =   6.92e-08
In gene WNT_SIGNALING the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 83768   n = 1	mu =   1.07e-07
In gene WNTPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 41358   n = 1	mu =   1.07e-07
Done
Outputting significance table: ./THCA.sig_genesets.txt
Done
Mapping 640 genesets from /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt to list of project genes.
100/640 200/640 300/640 400/640 500/640 600/640 
Total of 616 genesets contain at least one project gene.
Finding number of unique sites, unique patients: 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients
Analyzing silent/nonsilent ratios
Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Calculating significance of each gene.
Using projection method.
In gene HISTONE_METHYLTRANSFERASE the following bins exceed PROBCAP:
    THCA-BJ-A0ZE-TP	categ 6	N = 181479  n = 1	mu =   9.96e-08
    THCA-DJ-A2PR-TP	categ 6	N = 176874  n = 1	mu =   1.72e-07
    THCA-EM-A3O9-TP	categ 6	N = 179308  n = 2	mu =   2.02e-07
In gene ALKALOID_BIOSYNTHESIS_II the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 9077    n = 1	mu =   6.92e-08
In gene ALKPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 51161   n = 1	mu =   1.07e-07
In gene APOPTOSIS the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 87683   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 83905   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 86194   n = 1	mu =   1.35e-07
    THCA-FE-A23A-TP	categ 6	N = 86014   n = 1	mu =   6.85e-08
In gene APOPTOSIS_GENMAPP the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 56707   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 54440   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 55926   n = 1	mu =   1.35e-07
In gene APOPTOSIS_KEGG the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 65614   n = 1	mu =   1.35e-07
In gene ARAPPATHWAY the following bins exceed PROBCAP:
    THCA-DO-A1K0-TP	categ 6	N = 23932   n = 1	mu =   3.48e-08
    THCA-EM-A3O8-TP	categ 6	N = 24321   n = 1	mu =   6.74e-08
In gene ARFPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 30865   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 29874   n = 1	mu =   2.41e-07
In gene ARGININE_AND_PROLINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 64985   n = 1	mu =   6.92e-08
In gene ATMPATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 23510   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 43340   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 42598   n = 1	mu =   2.41e-07
In gene ATP_SYNTHESIS the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 22189   n = 1	mu =   6.96e-08
In gene ATRBRCAPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 64539   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 64212   n = 1	mu =   2.41e-07
In gene BETA_ALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 41857   n = 1	mu =   6.92e-08
In gene BIOSYNTHESIS_OF_STEROIDS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 16099   n = 1	mu =   2.41e-07
In gene CARM_ERPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 69573   n = 1	mu =   1.02e-07
In gene CASPASEPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 28807   n = 1	mu =   1.35e-07
In gene CDC25PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 11274   n = 1	mu =   1.36e-07
In gene CELL_CYCLE_KEGG the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 162839  n = 1	mu =   1.02e-07
    THCA-DJ-A3UV-TP	categ 6	N = 163802  n = 1	mu =   1.01e-07
    THCA-EL-A3D5-TP	categ 6	N = 165242  n = 2	mu =   2.33e-07
    THCA-EL-A3H3-TP	categ 6	N = 161609  n = 1	mu =   6.83e-08
    THCA-EM-A1YB-TP	categ 6	N = 160796  n = 1	mu =   2.41e-07
In gene CHEMICALPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 41418   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 40783   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 41034   n = 1	mu =   1.35e-07
In gene CHOLESTEROL_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 19280   n = 1	mu =   2.41e-07
In gene CIRCADIAN_EXERCISE the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 53495   n = 1	mu =   6.96e-08
In gene CREBPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 42502   n = 1	mu =   2.06e-07
In gene D4GDIPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 19111   n = 1	mu =   1.35e-07
In gene DEATHPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 50187   n = 1	mu =   1.35e-07
In gene DNA_REPLICATION_REACTOME the following bins exceed PROBCAP:
    THCA-DJ-A3UV-TP	categ 6	N = 76084   n = 1	mu =   1.01e-07
    THCA-EL-A3D5-TP	categ 6	N = 76582   n = 1	mu =   2.33e-07
    THCA-EM-A3O9-TP	categ 6	N = 76916   n = 1	mu =   2.02e-07
In gene EIF2PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22K-TP	categ 6	N = 17377   n = 1	mu =   1.01e-07
In gene ERK5PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 27491   n = 1	mu =   2.06e-07
In gene ERKPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 48016   n = 1	mu =   2.06e-07
In gene ETSPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 37841   n = 1	mu =   1.02e-07
In gene EXTRINSICPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 24461   n = 1	mu =   1.34e-07
In gene FASPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 59224   n = 1	mu =   6.83e-08
In gene FLAGELLAR_ASSEMBLY the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 22189   n = 1	mu =   6.96e-08
In gene G1_TO_S_CELL_CYCLE_REACTOME the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 117365  n = 2	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 113740  n = 1	mu =   2.41e-07
In gene G1PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 24045   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 45733   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 44311   n = 1	mu =   2.41e-07
In gene G2PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 33456   n = 1	mu =   1.36e-07
    THCA-DJ-A13L-TP	categ 6	N = 60564   n = 1	mu =   2.06e-07
    THCA-EL-A3D5-TP	categ 6	N = 61237   n = 1	mu =   2.33e-07
    THCA-EL-A3H3-TP	categ 6	N = 59717   n = 1	mu =   6.83e-08
    THCA-EM-A1YB-TP	categ 6	N = 59829   n = 1	mu =   2.41e-07
In gene G_PROTEIN_SIGNALING the following bins exceed PROBCAP:
    THCA-EM-A22K-TP	categ 6	N = 174073  n = 1	mu =   1.01e-07
In gene GHPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 48592   n = 1	mu =   2.06e-07
In gene GLYCINE_SERINE_AND_THREONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 62153   n = 1	mu =   6.92e-08
In gene GPCRDB_CLASS_C_METABOTROPIC_GLUTAMATE_PHEROMONE the following bins exceed PROBCAP:
    THCA-ET-A3DT-TP	categ 5	N = 31142   n = 1	mu =   6.89e-08
In gene GPCRDB_OTHER the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 101222  n = 1	mu =   1.67e-07
In gene GSK3PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 43462   n = 1	mu =   1.07e-07
In gene HISTIDINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 36428   n = 1	mu =   6.92e-08
In gene HIVNEFPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 101457  n = 1	mu =   6.83e-08
    THCA-EM-A3O6-TP	categ 6	N = 104302  n = 1	mu =   1.35e-07
In gene HSA00020_CITRATE_CYCLE the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 44627   n = 1	mu =   2.35e-07
In gene HSA00100_BIOSYNTHESIS_OF_STEROIDS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 28473   n = 1	mu =   2.41e-07
In gene HSA00190_OXIDATIVE_PHOSPHORYLATION the following bins exceed PROBCAP:
    THCA-DJ-A2PY-TP	categ 6	N = 83268   n = 1	mu =   6.81e-08
    THCA-ET-A3BN-TP	categ 6	N = 81519   n = 1	mu =   6.96e-08
In gene HSA00220_UREA_CYCLE_AND_METABOLISM_OF_AMINO_GROUPS the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 43565   n = 1	mu =   6.92e-08
In gene HSA00240_PYRIMIDINE_METABOLISM the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 120728  n = 1	mu =   2.02e-07
In gene HSA00260_GLYCINE_SERINE_AND_THREONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 63206   n = 1	mu =   6.92e-08
In gene HSA00271_METHIONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-DJ-A2Q2-TP	categ 6	N = 30309   n = 1	mu =   1.04e-07
    THCA-FY-A3ON-TP	categ 6	N = 31135   n = 1	mu =   2.03e-07
In gene HSA00310_LYSINE_DEGRADATION the following bins exceed PROBCAP:
    THCA-DJ-A2PR-TP	categ 6	N = 85242   n = 1	mu =   1.72e-07
In gene HSA00340_HISTIDINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 58814   n = 1	mu =   6.92e-08
    THCA-EL-A3D5-TP	categ 6	N = 59967   n = 1	mu =   2.33e-07
In gene HSA00350_TYROSINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 88005   n = 1	mu =   6.92e-08
In gene HSA00360_PHENYLALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 50577   n = 1	mu =   6.92e-08
    THCA-EM-A2CL-TP	categ 6	N = 51239   n = 1	mu =   3.35e-08
In gene HSA00380_TRYPTOPHAN_METABOLISM the following bins exceed PROBCAP:
    THCA-ET-A2MZ-TP	categ 5	N = 88751   n = 1	mu =   1.04e-07
    THCA-BJ-A192-TP	categ 6	N = 89975   n = 1	mu =   6.92e-08
In gene HSA00410_BETA_ALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 38845   n = 1	mu =   6.92e-08
In gene HSA00450_SELENOAMINO_ACID_METABOLISM the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 37779   n = 1	mu =   1.33e-07
In gene HSA00521_STREPTOMYCIN_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-ET-A3BU-TP	categ 6	N = 17001   n = 1	mu =   3.49e-08
In gene HSA00562_INOSITOL_PHOSPHATE_METABOLISM the following bins exceed PROBCAP:
    THCA-ET-A3BU-TP	categ 6	N = 108703  n = 1	mu =   3.49e-08
In gene HSA00620_PYRUVATE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 70654   n = 1	mu =   1.33e-07
In gene HSA00670_ONE_CARBON_POOL_BY_FOLATE the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 28493   n = 1	mu =   1.66e-07
    THCA-DJ-A13L-TP	categ 6	N = 28118   n = 1	mu =   2.06e-07
In gene HSA00680_METHANE_METABOLISM the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 17197   n = 1	mu =   2.06e-07
    THCA-EM-A2CL-TP	categ 6	N = 17526   n = 1	mu =   3.35e-08
In gene HSA00900_TERPENOID_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 6304    n = 1	mu =   2.41e-07
In gene HSA00920_SULFUR_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 14108   n = 1	mu =   1.33e-07
In gene HSA00940_PHENYLPROPANOID_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 12728   n = 1	mu =   3.35e-08
In gene HSA00960_ALKALOID_BIOSYNTHESIS_II the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 37646   n = 1	mu =   6.92e-08
In gene HSA02010_ABC_TRANSPORTERS_GENERAL the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 178729  n = 1	mu =   2.33e-07
    THCA-EM-A2P0-TP	categ 6	N = 178806  n = 1	mu =   6.65e-08
In gene HSA03030_DNA_POLYMERASE the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 61654   n = 1	mu =   2.02e-07
In gene HSA04020_CALCIUM_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 411544  n = 1	mu =   1.67e-07
In gene HSA04060_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 265560  n = 1	mu =   2.02e-07
In gene HSA04080_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION the following bins exceed PROBCAP:
    THCA-ET-A3DT-TP	categ 5	N = 327399  n = 1	mu =   6.89e-08
    THCA-FY-A3R6-TP	categ 6	N = 334612  n = 1	mu =   1.67e-07
In gene HSA04110_CELL_CYCLE the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 201523  n = 1	mu =   1.02e-07
    THCA-DJ-A3UV-TP	categ 6	N = 202054  n = 1	mu =   1.01e-07
    THCA-EL-A3CW-TP	categ 6	N = 201923  n = 1	mu =   1.02e-07
    THCA-EL-A3D5-TP	categ 6	N = 203686  n = 2	mu =   2.33e-07
    THCA-EL-A3H3-TP	categ 6	N = 199804  n = 1	mu =   6.83e-08
    THCA-EM-A1YB-TP	categ 6	N = 198488  n = 1	mu =   2.41e-07
In gene HSA04115_P53_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 96127   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 93235   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 95088   n = 1	mu =   1.35e-07
In gene HSA04130_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 24724   n = 1	mu =   2.41e-07
In gene HSA04150_MTOR_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 76793   n = 1	mu =   2.06e-07
In gene HSA04210_APOPTOSIS the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 126382  n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 122854  n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 125657  n = 1	mu =   1.35e-07
In gene HSA04330_NOTCH_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 102659  n = 1	mu =   1.02e-07
In gene HSA04340_HEDGEHOG_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 86739   n = 1	mu =   2.03e-07
In gene HSA04350_TGF_BETA_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-ET-A3BO-TP	categ 6	N = 144391  n = 1	mu =   1.40e-07
In gene HSA04360_AXON_GUIDANCE the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 283433  n = 1	mu =   2.44e-07
    THCA-GE-A2C6-TP	categ 5	N = 281957  n = 1	mu =   7.09e-08
    THCA-EM-A2CQ-TP	categ 6	N = 299121  n = 1	mu =   3.34e-08
In gene HSA04512_ECM_RECEPTOR_INTERACTION the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 340050  n = 1	mu =   1.67e-07
In gene HSA04620_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FE-A23A-TP	categ 6	N = 133645  n = 1	mu =   6.85e-08
In gene HSA04630_JAK_STAT_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 218047  n = 1	mu =   2.02e-07
In gene HSA04650_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 164703  n = 1	mu =   2.02e-07
In gene HSA04664_FC_EPSILON_RI_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-H2-A26U-TP	categ 6	N = 107709  n = 1	mu =   9.95e-08
In gene HSA04720_LONG_TERM_POTENTIATION the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 145737  n = 1	mu =   2.35e-07
    THCA-DJ-A13L-TP	categ 6	N = 143998  n = 1	mu =   2.06e-07
In gene HSA05120_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 102699  n = 1	mu =   6.96e-08
In gene HSP27PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 17022   n = 1	mu =   1.35e-07
In gene IFNGPATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 12378   n = 1	mu =   2.02e-07
In gene INTRINSICPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 66583   n = 1	mu =   1.34e-07
In gene MAPKPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 135074  n = 1	mu =   2.06e-07
In gene MEF2DPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 36458   n = 1	mu =   1.02e-07
In gene METHANE_METABOLISM the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 17883   n = 1	mu =   3.35e-08
In gene METHIONINE_METABOLISM the following bins exceed PROBCAP:
    THCA-DJ-A2Q2-TP	categ 6	N = 25430   n = 1	mu =   1.04e-07
    THCA-FY-A3ON-TP	categ 6	N = 26031   n = 1	mu =   2.03e-07
In gene MITOCHONDRIAPATHWAY the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 20220   n = 1	mu =   1.35e-07
In gene MPRPATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 29494   n = 1	mu =   2.06e-07
In gene MRNA_PROCESSING_REACTOME the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 156422  n = 1	mu =   2.33e-07
    THCA-EL-A3GO-TP	categ 6	N = 156007  n = 1	mu =   1.02e-07
    THCA-ET-A3BN-TP	categ 6	N = 152875  n = 1	mu =   6.96e-08
In gene MRPPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 21400   n = 1	mu =   2.33e-07
In gene NKTPATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 30194   n = 1	mu =   2.02e-07
In gene NO1PATHWAY the following bins exceed PROBCAP:
    THCA-EM-A2CU-TP	categ 6	N = 55319   n = 1	mu =   1.08e-07
In gene ONE_CARBON_POOL_BY_FOLATE the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 26940   n = 1	mu =   1.66e-07
    THCA-DJ-A13L-TP	categ 6	N = 26532   n = 1	mu =   2.06e-07
In gene OXIDATIVE_PHOSPHORYLATION the following bins exceed PROBCAP:
    THCA-EL-A3GR-TP	categ 6	N = 57748   n = 1	mu =   9.98e-08
    THCA-ET-A3BN-TP	categ 6	N = 56076   n = 1	mu =   6.96e-08
In gene P53HYPOXIAPATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 16689   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 31173   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 30813   n = 1	mu =   2.41e-07
In gene P53PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 14943   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 27299   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 26595   n = 1	mu =   2.41e-07
    THCA-EM-A3O6-TP	categ 6	N = 27299   n = 1	mu =   1.35e-07
In gene PHENYLALANINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 32402   n = 1	mu =   6.92e-08
    THCA-EM-A2CL-TP	categ 6	N = 32889   n = 1	mu =   3.35e-08
In gene PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 167722  n = 1	mu =   2.06e-07
In gene PHOTOSYNTHESIS the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 23537   n = 1	mu =   6.96e-08
In gene PITX2PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 47531   n = 1	mu =   1.07e-07
In gene PLK3PATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 13129   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 22315   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 22366   n = 1	mu =   2.41e-07
In gene PMLPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 28231   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 27090   n = 1	mu =   2.41e-07
In gene PROSTAGLANDIN_AND_LEUKOTRIENE_METABOLISM the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 42259   n = 1	mu =   3.35e-08
In gene PS1PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 28840   n = 1	mu =   1.07e-07
In gene PYRUVATE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 55824   n = 1	mu =   1.33e-07
In gene RBPATHWAY the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 14403   n = 1	mu =   1.36e-07
    THCA-EL-A3D5-TP	categ 6	N = 26367   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 26083   n = 1	mu =   2.41e-07
In gene RIBOSOMAL_PROTEINS the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 78178   n = 1	mu =   2.06e-07
In gene RNAPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 14653   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 14221   n = 1	mu =   2.41e-07
In gene S1PPATHWAY the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 17573   n = 1	mu =   2.44e-07
    THCA-BJ-A28R-TP	categ 6	N = 18118   n = 1	mu =   6.72e-08
In gene SA_B_CELL_RECEPTOR_COMPLEXES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 46460   n = 1	mu =   2.06e-07
In gene SA_CASPASE_CASCADE the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 27011   n = 1	mu =   1.35e-07
In gene SA_G1_AND_S_PHASES the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 12925   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 12247   n = 1	mu =   2.41e-07
In gene SA_PROGRAMMED_CELL_DEATH the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 16916   n = 1	mu =   1.35e-07
In gene SELENOAMINO_ACID_METABOLISM the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 18720   n = 1	mu =   1.33e-07
In gene SHHPATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 20709   n = 1	mu =   2.03e-07
In gene SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 88696   n = 1	mu =   2.06e-07
    THCA-EL-A3CM-TP	categ 6	N = 85912   n = 1	mu =   1.06e-07
    THCA-EL-A3CW-TP	categ 6	N = 88647   n = 1	mu =   1.02e-07
In gene SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 82564   n = 1	mu =   2.06e-07
In gene SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 114934  n = 1	mu =   2.06e-07
    THCA-EL-A3CM-TP	categ 6	N = 111212  n = 1	mu =   1.06e-07
    THCA-EL-A3CW-TP	categ 6	N = 115331  n = 1	mu =   1.02e-07
In gene ST_ADRENERGIC the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 74527   n = 1	mu =   1.44e-07
    THCA-EL-A3CX-TP	categ 6	N = 74147   n = 1	mu =   1.07e-07
In gene ST_ERK1_ERK2_MAPK_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 41751   n = 1	mu =   2.06e-07
In gene ST_FAS_SIGNALING_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 110795  n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 107276  n = 1	mu =   2.41e-07
In gene ST_GA13_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 70164   n = 1	mu =   1.44e-07
In gene ST_GAQ_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 63705   n = 1	mu =   1.44e-07
In gene ST_GRANULE_CELL_SURVIVAL_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 40092   n = 1	mu =   1.07e-07
In gene ST_INTERFERON_GAMMA_PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 17387   n = 1	mu =   2.02e-07
In gene ST_JNK_MAPK_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 74178   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 71909   n = 1	mu =   2.41e-07
In gene ST_MYOCYTE_AD_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 64850   n = 1	mu =   1.07e-07
In gene ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 54062   n = 1	mu =   2.06e-07
    THCA-EL-A3CW-TP	categ 6	N = 54066   n = 1	mu =   1.02e-07
In gene ST_WNT_BETA_CATENIN_PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 56085   n = 1	mu =   1.07e-07
    THCA-FY-A3ON-TP	categ 6	N = 60649   n = 1	mu =   2.03e-07
In gene STATIN_PATHWAY_PHARMGKB the following bins exceed PROBCAP:
    THCA-FE-A235-TP	categ 6	N = 40878   n = 1	mu =   1.02e-07
    THCA-FY-A3ON-TP	categ 6	N = 40636   n = 1	mu =   2.03e-07
In gene STILBENE_COUMARINE_AND_LIGNIN_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 14655   n = 1	mu =   3.35e-08
In gene SULFUR_METABOLISM the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 9136    n = 1	mu =   1.33e-07
    THCA-BJ-A0Z2-TP	categ 6	N = 9136    n = 1	mu =   1.33e-07
In gene TELPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 42637   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 41685   n = 1	mu =   2.41e-07
In gene TERPENOID_BIOSYNTHESIS the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 4693    n = 1	mu =   2.41e-07
In gene TERTPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 10643   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 10466   n = 1	mu =   2.41e-07
In gene TGFBPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 37630   n = 1	mu =   1.07e-07
In gene TH1TH2PATHWAY the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 19015   n = 1	mu =   2.02e-07
In gene TIDPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 27624   n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 26538   n = 1	mu =   2.41e-07
    THCA-FY-A3RA-TP	categ 6	N = 27341   n = 1	mu =   2.02e-07
In gene TNFR1PATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 56587   n = 1	mu =   6.83e-08
In gene TRYPTOPHAN_METABOLISM the following bins exceed PROBCAP:
    THCA-ET-A2MZ-TP	categ 5	N = 81297   n = 1	mu =   1.04e-07
    THCA-BJ-A192-TP	categ 6	N = 81687   n = 1	mu =   6.92e-08
In gene TYPE_III_SECRETION_SYSTEM the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 22189   n = 1	mu =   6.96e-08
In gene TYROSINE_METABOLISM the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 46869   n = 1	mu =   6.92e-08
In gene WNT_SIGNALING the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 83768   n = 1	mu =   1.07e-07
In gene WNTPATHWAY the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 41358   n = 1	mu =   1.07e-07
Done
Outputting significance table: ./THCA.sig_genesets_2.txt
Done
Loaded COSMIC database from /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
WARNING: unknown chromosome(s):
    {''}

COSMIC analysis:  gene 1000/4522 2000/4522 3000/4522 4000/4522 
Loading refseq database...

Mutation coordinate error (line 2152): Length of alternate bases must equal length of refence bases.
112621447	112621449	GNG	GNG	A
Mutation coordinate error (line 3036): Length of alternate bases must equal length of refence bases.
20148725	20148726	GC	GC	A

Error in maflite format!  The faulty lines displayed above will not be included in output.
Ignoring the mutations listed above.
Analyzing clustered mutations
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100/3737 200/3737 convert_chr: assuming human for chrX/chrY
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300/3737 convert_chr: assuming human for chrX/chrY
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<BRAF muts: 100/183 /> 400/3737 500/3737 convert_chr: assuming human for chrX/chrY
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600/3737 700/3737 convert_chr: assuming human for chrX/chrY
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800/3737 convert_chr: assuming human for chrX/chrY
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900/3737 convert_chr: assuming human for chrX/chrY
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1000/3737 convert_chr: assuming human for chrX/chrY
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1100/3737 convert_chr: assuming human for chrX/chrY
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1200/3737 1300/3737 1400/3737 convert_chr: assuming human for chrX/chrY
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1500/3737 convert_chr: assuming human for chrX/chrY
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1600/3737 1700/3737 1800/3737 convert_chr: assuming human for chrX/chrY
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1900/3737 convert_chr: assuming human for chrX/chrY
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2000/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
2100/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
2200/3737 2300/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
2400/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
2500/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
2600/3737 2700/3737 2800/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
2900/3737 3000/3737 3100/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
3200/3737 3300/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
3400/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
3500/3737 WARNING: unknown chromosome(s):
    'chr6_dbb_hap3'

WARNING: unknown chromosome(s):
    'chr6_dbb_hap3'

WARNING: unknown chromosome(s):
    'chr6_dbb_hap3'

WARNING: unknown chromosome(s):
    'chr6_dbb_hap3'

3600/3737 convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
convert_chr: assuming human for chrX/chrY
3700/3737 
Analyzing gene-gene correlations and anti-correlations
Performing permutations:
0.23	10/1000000	0.02	0.023	43.0	1281/1326 pairs	12/52 genes done
1.48	225/1000000	0.01	0.006	172.2	1315/1326 pairs	35/52 genes done
4.58	1086/1000000	0.00	0.004	278.0	1322/1326 pairs	47/52 genes done
9.09	2476/1000000	0.00	0.003	308.1	1323/1326 pairs	48/52 genes done
14.05	4016/1000000	0.00	0.003	310.3	1323/1326 pairs	48/52 genes done
18.87	5567/1000000	0.00	0.003	322.0	1324/1326 pairs	49/52 genes done
23.41	7178/1000000	0.00	0.003	355.1	1324/1326 pairs	49/52 genes done
28.31	8952/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
33.37	10762/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
38.40	12571/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
43.40	14381/1000000	0.00	0.003	361.4	1324/1326 pairs	49/52 genes done
48.42	16190/1000000	0.00	0.003	360.8	1324/1326 pairs	49/52 genes done
53.42	17999/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
58.42	19809/1000000	0.00	0.003	362.2	1324/1326 pairs	49/52 genes done
63.46	21619/1000000	0.00	0.003	358.9	1324/1326 pairs	49/52 genes done
68.54	23429/1000000	0.00	0.003	356.6	1324/1326 pairs	49/52 genes done
73.60	25239/1000000	0.00	0.003	357.6	1324/1326 pairs	49/52 genes done
78.56	27049/1000000	0.00	0.003	364.6	1324/1326 pairs	49/52 genes done
83.60	28872/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
88.87	30695/1000000	0.00	0.003	345.4	1324/1326 pairs	49/52 genes done
93.96	32518/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
99.07	34341/1000000	0.00	0.003	356.9	1324/1326 pairs	49/52 genes done
104.15	36164/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
109.23	37987/1000000	0.00	0.003	358.6	1324/1326 pairs	49/52 genes done
114.41	39810/1000000	0.00	0.003	352.0	1324/1326 pairs	49/52 genes done
119.48	41633/1000000	0.00	0.003	359.4	1324/1326 pairs	49/52 genes done
124.53	43456/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
129.57	45279/1000000	0.00	0.003	361.5	1324/1326 pairs	49/52 genes done
134.61	47102/1000000	0.00	0.003	361.6	1324/1326 pairs	49/52 genes done
139.69	48925/1000000	0.00	0.003	358.9	1324/1326 pairs	49/52 genes done
144.92	50748/1000000	0.00	0.003	348.8	1324/1326 pairs	49/52 genes done
149.98	52571/1000000	0.00	0.003	360.2	1324/1326 pairs	49/52 genes done
155.09	54394/1000000	0.00	0.003	356.4	1324/1326 pairs	49/52 genes done
160.14	56217/1000000	0.00	0.003	361.5	1324/1326 pairs	49/52 genes done
165.20	58040/1000000	0.00	0.003	360.2	1324/1326 pairs	49/52 genes done
170.28	59863/1000000	0.00	0.003	358.9	1324/1326 pairs	49/52 genes done
176.23	61686/1000000	0.00	0.003	306.4	1324/1326 pairs	49/52 genes done
181.61	63509/1000000	0.00	0.003	338.4	1324/1326 pairs	49/52 genes done
186.70	65332/1000000	0.00	0.003	358.6	1324/1326 pairs	49/52 genes done
191.80	67155/1000000	0.00	0.003	357.4	1324/1326 pairs	49/52 genes done
196.87	68978/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
201.95	70801/1000000	0.00	0.003	359.0	1324/1326 pairs	49/52 genes done
207.03	72624/1000000	0.00	0.003	359.3	1324/1326 pairs	49/52 genes done
212.12	74447/1000000	0.00	0.003	357.6	1324/1326 pairs	49/52 genes done
217.21	76270/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
222.30	78093/1000000	0.00	0.003	358.5	1324/1326 pairs	49/52 genes done
227.37	79916/1000000	0.00	0.003	359.4	1324/1326 pairs	49/52 genes done
232.45	81739/1000000	0.00	0.003	358.5	1324/1326 pairs	49/52 genes done
237.52	83562/1000000	0.00	0.003	359.6	1324/1326 pairs	49/52 genes done
242.58	85385/1000000	0.00	0.003	360.5	1324/1326 pairs	49/52 genes done
247.63	87208/1000000	0.00	0.003	361.0	1324/1326 pairs	49/52 genes done
252.69	89031/1000000	0.00	0.003	360.2	1324/1326 pairs	49/52 genes done
257.76	90854/1000000	0.00	0.003	359.8	1324/1326 pairs	49/52 genes done
262.86	92677/1000000	0.00	0.003	356.9	1324/1326 pairs	49/52 genes done
267.97	94500/1000000	0.00	0.003	357.1	1324/1326 pairs	49/52 genes done
273.15	96323/1000000	0.00	0.003	351.8	1324/1326 pairs	49/52 genes done
278.25	98145/1000000	0.00	0.003	357.6	1324/1326 pairs	49/52 genes done
283.30	99968/1000000	0.00	0.003	360.8	1324/1326 pairs	49/52 genes done
288.35	101791/1000000	0.00	0.003	361.0	1324/1326 pairs	49/52 genes done
293.42	103614/1000000	0.00	0.003	359.5	1324/1326 pairs	49/52 genes done
298.51	105437/1000000	0.00	0.003	358.2	1324/1326 pairs	49/52 genes done
303.64	107260/1000000	0.00	0.003	355.7	1324/1326 pairs	49/52 genes done
308.75	109083/1000000	0.00	0.003	356.4	1324/1326 pairs	49/52 genes done
313.99	110906/1000000	0.00	0.003	347.9	1324/1326 pairs	49/52 genes done
319.06	112729/1000000	0.00	0.003	359.4	1324/1326 pairs	49/52 genes done
324.18	114552/1000000	0.00	0.003	355.9	1324/1326 pairs	49/52 genes done
329.29	116375/1000000	0.00	0.003	356.9	1324/1326 pairs	49/52 genes done
334.39	118198/1000000	0.00	0.003	357.6	1324/1326 pairs	49/52 genes done
339.48	120021/1000000	0.00	0.003	358.0	1324/1326 pairs	49/52 genes done
344.59	121844/1000000	0.00	0.003	356.8	1324/1326 pairs	49/52 genes done
349.69	123667/1000000	0.00	0.003	357.3	1324/1326 pairs	49/52 genes done
354.77	125490/1000000	0.00	0.003	359.4	1324/1326 pairs	49/52 genes done
359.83	127313/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
364.91	129136/1000000	0.00	0.003	358.8	1324/1326 pairs	49/52 genes done
369.99	130959/1000000	0.00	0.003	358.7	1324/1326 pairs	49/52 genes done
375.07	132782/1000000	0.00	0.003	359.2	1324/1326 pairs	49/52 genes done
380.16	134605/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
385.24	136428/1000000	0.00	0.003	358.7	1324/1326 pairs	49/52 genes done
390.36	138251/1000000	0.00	0.003	355.8	1324/1326 pairs	49/52 genes done
395.42	140074/1000000	0.00	0.003	360.5	1324/1326 pairs	49/52 genes done
400.46	141897/1000000	0.00	0.003	361.9	1324/1326 pairs	49/52 genes done
405.47	143720/1000000	0.00	0.003	363.9	1324/1326 pairs	49/52 genes done
410.50	145543/1000000	0.00	0.003	362.2	1324/1326 pairs	49/52 genes done
415.52	147366/1000000	0.00	0.003	363.3	1324/1326 pairs	49/52 genes done
420.53	149189/1000000	0.00	0.003	363.6	1324/1326 pairs	49/52 genes done
425.54	151012/1000000	0.00	0.003	364.2	1324/1326 pairs	49/52 genes done
430.62	152835/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
435.71	154658/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
440.80	156481/1000000	0.00	0.003	358.0	1324/1326 pairs	49/52 genes done
445.90	158304/1000000	0.00	0.003	358.1	1324/1326 pairs	49/52 genes done
451.06	160127/1000000	0.00	0.003	352.9	1324/1326 pairs	49/52 genes done
456.14	161950/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
461.23	163773/1000000	0.00	0.003	358.1	1324/1326 pairs	49/52 genes done
466.34	165596/1000000	0.00	0.003	356.8	1324/1326 pairs	49/52 genes done
471.41	167419/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
476.60	169241/1000000	0.00	0.003	351.1	1324/1326 pairs	49/52 genes done
481.67	171064/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
486.71	172887/1000000	0.00	0.003	361.9	1324/1326 pairs	49/52 genes done
491.75	174710/1000000	0.00	0.003	361.4	1324/1326 pairs	49/52 genes done
496.80	176533/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
501.90	178356/1000000	0.00	0.003	357.5	1324/1326 pairs	49/52 genes done
506.95	180179/1000000	0.00	0.003	360.6	1324/1326 pairs	49/52 genes done
512.00	182002/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
517.21	183825/1000000	0.00	0.003	349.8	1324/1326 pairs	49/52 genes done
522.23	185648/1000000	0.00	0.003	363.3	1324/1326 pairs	49/52 genes done
527.36	187471/1000000	0.00	0.003	355.5	1324/1326 pairs	49/52 genes done
532.55	189294/1000000	0.00	0.003	351.2	1324/1326 pairs	49/52 genes done
537.64	191117/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
542.74	192940/1000000	0.00	0.003	357.4	1324/1326 pairs	49/52 genes done
547.84	194763/1000000	0.00	0.003	357.4	1324/1326 pairs	49/52 genes done
552.95	196586/1000000	0.00	0.003	357.1	1324/1326 pairs	49/52 genes done
558.05	198409/1000000	0.00	0.003	357.3	1324/1326 pairs	49/52 genes done
563.16	200232/1000000	0.00	0.003	356.6	1324/1326 pairs	49/52 genes done
568.20	202055/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
573.34	203878/1000000	0.00	0.003	354.3	1324/1326 pairs	49/52 genes done
578.48	205701/1000000	0.00	0.003	354.8	1324/1326 pairs	49/52 genes done
583.56	207524/1000000	0.00	0.003	358.6	1324/1326 pairs	49/52 genes done
588.61	209347/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
593.64	211170/1000000	0.00	0.003	362.7	1324/1326 pairs	49/52 genes done
598.65	212993/1000000	0.00	0.003	364.1	1324/1326 pairs	49/52 genes done
603.83	214816/1000000	0.00	0.003	352.0	1324/1326 pairs	49/52 genes done
608.87	216639/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
613.98	218462/1000000	0.00	0.003	357.0	1324/1326 pairs	49/52 genes done
619.01	220285/1000000	0.00	0.003	362.3	1324/1326 pairs	49/52 genes done
624.13	222108/1000000	0.00	0.003	356.0	1324/1326 pairs	49/52 genes done
629.17	223931/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
634.22	225754/1000000	0.00	0.003	361.0	1324/1326 pairs	49/52 genes done
639.43	227577/1000000	0.00	0.003	349.8	1324/1326 pairs	49/52 genes done
644.50	229400/1000000	0.00	0.003	359.7	1324/1326 pairs	49/52 genes done
649.55	231223/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
654.61	233046/1000000	0.00	0.003	359.8	1324/1326 pairs	49/52 genes done
659.66	234869/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
664.71	236692/1000000	0.00	0.003	361.1	1324/1326 pairs	49/52 genes done
669.86	238514/1000000	0.00	0.003	353.8	1324/1326 pairs	49/52 genes done
674.92	240337/1000000	0.00	0.003	360.2	1324/1326 pairs	49/52 genes done
679.98	242160/1000000	0.00	0.003	360.8	1324/1326 pairs	49/52 genes done
685.17	243983/1000000	0.00	0.003	351.2	1324/1326 pairs	49/52 genes done
690.25	245806/1000000	0.00	0.003	358.9	1324/1326 pairs	49/52 genes done
695.33	247629/1000000	0.00	0.003	358.8	1324/1326 pairs	49/52 genes done
700.44	249452/1000000	0.00	0.003	356.7	1324/1326 pairs	49/52 genes done
705.52	251275/1000000	0.00	0.003	358.9	1324/1326 pairs	49/52 genes done
710.58	253098/1000000	0.00	0.003	360.2	1324/1326 pairs	49/52 genes done
715.74	254921/1000000	0.00	0.003	353.5	1324/1326 pairs	49/52 genes done
720.79	256744/1000000	0.00	0.003	360.8	1324/1326 pairs	49/52 genes done
725.81	258567/1000000	0.00	0.003	363.1	1324/1326 pairs	49/52 genes done
730.85	260390/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
735.94	262213/1000000	0.00	0.003	357.7	1324/1326 pairs	49/52 genes done
741.03	264036/1000000	0.00	0.003	358.7	1324/1326 pairs	49/52 genes done
746.22	265859/1000000	0.00	0.003	350.7	1324/1326 pairs	49/52 genes done
751.35	267682/1000000	0.00	0.003	355.6	1324/1326 pairs	49/52 genes done
756.55	269505/1000000	0.00	0.003	350.6	1324/1326 pairs	49/52 genes done
761.70	271328/1000000	0.00	0.003	353.7	1324/1326 pairs	49/52 genes done
766.89	273151/1000000	0.00	0.003	351.6	1324/1326 pairs	49/52 genes done
771.96	274974/1000000	0.00	0.003	359.3	1324/1326 pairs	49/52 genes done
777.06	276797/1000000	0.00	0.003	357.5	1324/1326 pairs	49/52 genes done
782.13	278620/1000000	0.00	0.003	359.4	1324/1326 pairs	49/52 genes done
787.19	280443/1000000	0.00	0.003	360.4	1324/1326 pairs	49/52 genes done
792.25	282266/1000000	0.00	0.003	360.7	1324/1326 pairs	49/52 genes done
797.28	284089/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
802.35	285912/1000000	0.00	0.003	360.1	1324/1326 pairs	49/52 genes done
807.46	287735/1000000	0.00	0.003	356.3	1324/1326 pairs	49/52 genes done
812.51	289558/1000000	0.00	0.003	361.2	1324/1326 pairs	49/52 genes done
817.56	291381/1000000	0.00	0.003	361.2	1324/1326 pairs	49/52 genes done
822.74	293204/1000000	0.00	0.003	351.6	1324/1326 pairs	49/52 genes done
827.85	295027/1000000	0.00	0.003	357.1	1324/1326 pairs	49/52 genes done
833.00	296850/1000000	0.00	0.003	353.8	1324/1326 pairs	49/52 genes done
838.48	298673/1000000	0.00	0.003	332.9	1324/1326 pairs	49/52 genes done
843.82	300496/1000000	0.00	0.003	341.3	1324/1326 pairs	49/52 genes done
849.05	302319/1000000	0.00	0.003	348.5	1324/1326 pairs	49/52 genes done
854.04	304142/1000000	0.00	0.003	365.4	1324/1326 pairs	49/52 genes done
859.03	305968/1000000	0.00	0.003	365.5	1324/1326 pairs	49/52 genes done
864.04	307797/1000000	0.00	0.003	365.1	1324/1326 pairs	49/52 genes done
869.05	309625/1000000	0.00	0.003	365.3	1324/1326 pairs	49/52 genes done
874.05	311453/1000000	0.00	0.003	364.9	1324/1326 pairs	49/52 genes done
879.08	313282/1000000	0.00	0.003	363.9	1324/1326 pairs	49/52 genes done
884.08	315110/1000000	0.00	0.003	365.7	1324/1326 pairs	49/52 genes done
889.10	316939/1000000	0.00	0.003	364.2	1324/1326 pairs	49/52 genes done
894.10	318768/1000000	0.00	0.003	365.5	1324/1326 pairs	49/52 genes done
899.13	320597/1000000	0.00	0.003	364.0	1324/1326 pairs	49/52 genes done
904.13	322426/1000000	0.00	0.003	365.8	1324/1326 pairs	49/52 genes done
909.14	324255/1000000	0.00	0.003	364.7	1324/1326 pairs	49/52 genes done
914.17	326084/1000000	0.00	0.003	364.0	1324/1326 pairs	49/52 genes done
919.19	327913/1000000	0.00	0.003	364.5	1324/1326 pairs	49/52 genes done
924.20	329742/1000000	0.00	0.003	364.6	1324/1326 pairs	49/52 genes done
929.61	331571/1000000	0.00	0.003	338.6	1324/1326 pairs	49/52 genes done
935.53	333400/1000000	0.00	0.003	308.7	1324/1326 pairs	49/52 genes done
941.04	335229/1000000	0.00	0.003	332.2	1324/1326 pairs	49/52 genes done
946.09	337058/1000000	0.00	0.003	361.9	1324/1326 pairs	49/52 genes done
951.15	338887/1000000	0.00	0.003	361.5	1324/1326 pairs	49/52 genes done
956.21	340716/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
961.26	342545/1000000	0.00	0.003	362.6	1324/1326 pairs	49/52 genes done
966.32	344374/1000000	0.00	0.003	361.1	1324/1326 pairs	49/52 genes done
971.48	346203/1000000	0.00	0.003	354.3	1324/1326 pairs	49/52 genes done
976.92	348032/1000000	0.00	0.003	336.4	1324/1326 pairs	49/52 genes done
982.44	349861/1000000	0.00	0.003	331.4	1324/1326 pairs	49/52 genes done
988.72	351690/1000000	0.00	0.003	291.1	1324/1326 pairs	49/52 genes done
994.32	353519/1000000	0.00	0.003	326.9	1324/1326 pairs	49/52 genes done
999.70	355348/1000000	0.00	0.003	339.6	1324/1326 pairs	49/52 genes done
1005.44	357177/1000000	0.00	0.003	318.8	1324/1326 pairs	49/52 genes done
1011.33	359006/1000000	0.00	0.003	310.5	1324/1326 pairs	49/52 genes done
1016.54	360835/1000000	0.00	0.003	351.2	1324/1326 pairs	49/52 genes done
1021.61	362664/1000000	0.00	0.003	360.7	1324/1326 pairs	49/52 genes done
1026.67	364493/1000000	0.00	0.003	361.2	1324/1326 pairs	49/52 genes done
1031.81	366322/1000000	0.00	0.003	356.2	1324/1326 pairs	49/52 genes done
1036.92	368151/1000000	0.00	0.003	357.9	1324/1326 pairs	49/52 genes done
1042.02	369980/1000000	0.00	0.003	358.5	1324/1326 pairs	49/52 genes done
1047.09	371809/1000000	0.00	0.003	360.6	1324/1326 pairs	49/52 genes done
1052.20	373638/1000000	0.00	0.003	358.1	1324/1326 pairs	49/52 genes done
1057.28	375467/1000000	0.00	0.003	359.7	1324/1326 pairs	49/52 genes done
1062.38	377296/1000000	0.00	0.003	358.7	1324/1326 pairs	49/52 genes done
1067.50	379125/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
1072.62	380954/1000000	0.00	0.003	356.7	1324/1326 pairs	49/52 genes done
1077.74	382783/1000000	0.00	0.003	357.4	1324/1326 pairs	49/52 genes done
1082.89	384612/1000000	0.00	0.003	355.2	1324/1326 pairs	49/52 genes done
1088.01	386441/1000000	0.00	0.003	357.1	1324/1326 pairs	49/52 genes done
1093.21	388270/1000000	0.00	0.003	352.1	1324/1326 pairs	49/52 genes done
1098.32	390099/1000000	0.00	0.003	357.5	1324/1326 pairs	49/52 genes done
1103.46	391928/1000000	0.00	0.003	356.1	1324/1326 pairs	49/52 genes done
1108.57	393757/1000000	0.00	0.003	358.0	1324/1326 pairs	49/52 genes done
1113.66	395586/1000000	0.00	0.003	359.0	1324/1326 pairs	49/52 genes done
1118.77	397415/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
1123.86	399244/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
1129.14	401073/1000000	0.00	0.003	346.5	1324/1326 pairs	49/52 genes done
1134.30	402902/1000000	0.00	0.003	354.3	1324/1326 pairs	49/52 genes done
1139.41	404731/1000000	0.00	0.003	358.2	1324/1326 pairs	49/52 genes done
1144.53	406560/1000000	0.00	0.003	357.2	1324/1326 pairs	49/52 genes done
1149.63	408389/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
1154.78	410218/1000000	0.00	0.003	355.0	1324/1326 pairs	49/52 genes done
1159.94	412047/1000000	0.00	0.003	354.8	1324/1326 pairs	49/52 genes done
1165.11	413876/1000000	0.00	0.003	353.2	1324/1326 pairs	49/52 genes done
1170.23	415705/1000000	0.00	0.003	357.4	1324/1326 pairs	49/52 genes done
1175.34	417534/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
1180.49	419363/1000000	0.00	0.003	355.2	1324/1326 pairs	49/52 genes done
1185.82	421192/1000000	0.00	0.003	343.5	1324/1326 pairs	49/52 genes done
1190.92	423021/1000000	0.00	0.003	358.6	1324/1326 pairs	49/52 genes done
1196.04	424850/1000000	0.00	0.003	356.8	1324/1326 pairs	49/52 genes done
1201.15	426679/1000000	0.00	0.003	357.9	1324/1326 pairs	49/52 genes done
1206.20	428508/1000000	0.00	0.003	362.4	1324/1326 pairs	49/52 genes done
1211.27	430337/1000000	0.00	0.003	361.1	1324/1326 pairs	49/52 genes done
1216.33	432166/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
1221.38	433995/1000000	0.00	0.003	361.9	1324/1326 pairs	49/52 genes done
1226.46	435824/1000000	0.00	0.003	360.4	1324/1326 pairs	49/52 genes done
1231.49	437653/1000000	0.00	0.003	363.5	1324/1326 pairs	49/52 genes done
1236.54	439482/1000000	0.00	0.003	362.1	1324/1326 pairs	49/52 genes done
1241.57	441311/1000000	0.00	0.003	363.8	1324/1326 pairs	49/52 genes done
1246.62	443140/1000000	0.00	0.003	362.1	1324/1326 pairs	49/52 genes done
1251.69	444969/1000000	0.00	0.003	360.5	1324/1326 pairs	49/52 genes done
1256.75	446798/1000000	0.00	0.003	361.4	1324/1326 pairs	49/52 genes done
1261.80	448627/1000000	0.00	0.003	362.5	1324/1326 pairs	49/52 genes done
1266.83	450456/1000000	0.00	0.003	363.8	1324/1326 pairs	49/52 genes done
1271.88	452285/1000000	0.00	0.003	361.9	1324/1326 pairs	49/52 genes done
1276.93	454114/1000000	0.00	0.003	362.3	1324/1326 pairs	49/52 genes done
1281.98	455943/1000000	0.00	0.003	362.4	1324/1326 pairs	49/52 genes done
1287.27	457772/1000000	0.00	0.003	345.8	1324/1326 pairs	49/52 genes done
1292.43	459601/1000000	0.00	0.003	354.2	1324/1326 pairs	49/52 genes done
1297.50	461430/1000000	0.00	0.003	361.1	1324/1326 pairs	49/52 genes done
1302.55	463259/1000000	0.00	0.003	361.6	1324/1326 pairs	49/52 genes done
1307.71	465088/1000000	0.00	0.003	355.1	1324/1326 pairs	49/52 genes done
1314.07	466917/1000000	0.00	0.003	287.3	1324/1326 pairs	49/52 genes done
1321.73	468746/1000000	0.00	0.004	238.7	1324/1326 pairs	49/52 genes done
1326.81	470575/1000000	0.00	0.003	360.5	1324/1326 pairs	49/52 genes done
1331.90	472404/1000000	0.00	0.003	359.2	1324/1326 pairs	49/52 genes done
1337.84	474233/1000000	0.00	0.003	307.6	1324/1326 pairs	49/52 genes done
1343.01	476062/1000000	0.00	0.003	354.2	1324/1326 pairs	49/52 genes done
1348.13	477891/1000000	0.00	0.003	357.3	1324/1326 pairs	49/52 genes done
1353.25	479720/1000000	0.00	0.003	357.4	1324/1326 pairs	49/52 genes done
1358.33	481549/1000000	0.00	0.003	360.0	1324/1326 pairs	49/52 genes done
1363.47	483378/1000000	0.00	0.003	355.3	1324/1326 pairs	49/52 genes done
1370.26	485207/1000000	0.00	0.004	269.7	1324/1326 pairs	49/52 genes done
1375.37	487036/1000000	0.00	0.003	358.0	1324/1326 pairs	49/52 genes done
1380.46	488865/1000000	0.00	0.003	359.0	1324/1326 pairs	49/52 genes done
1385.57	490694/1000000	0.00	0.003	358.2	1324/1326 pairs	49/52 genes done
1390.68	492523/1000000	0.00	0.003	357.5	1324/1326 pairs	49/52 genes done
1395.83	494352/1000000	0.00	0.003	355.6	1324/1326 pairs	49/52 genes done
1400.94	496181/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
1406.00	498010/1000000	0.00	0.003	361.5	1324/1326 pairs	49/52 genes done
1411.02	499839/1000000	0.00	0.003	363.9	1324/1326 pairs	49/52 genes done
1416.07	501668/1000000	0.00	0.003	362.1	1324/1326 pairs	49/52 genes done
1421.10	503497/1000000	0.00	0.003	363.6	1324/1326 pairs	49/52 genes done
1426.15	505326/1000000	0.00	0.003	362.3	1324/1326 pairs	49/52 genes done
1431.45	507155/1000000	0.00	0.003	345.0	1324/1326 pairs	49/52 genes done
1436.85	508984/1000000	0.00	0.003	339.1	1324/1326 pairs	49/52 genes done
1442.66	510813/1000000	0.00	0.003	314.4	1324/1326 pairs	49/52 genes done
1448.25	512642/1000000	0.00	0.003	327.3	1324/1326 pairs	49/52 genes done
1453.68	514471/1000000	0.00	0.003	336.8	1324/1326 pairs	49/52 genes done
1459.05	516300/1000000	0.00	0.003	340.8	1324/1326 pairs	49/52 genes done
1464.45	518129/1000000	0.00	0.003	338.8	1324/1326 pairs	49/52 genes done
1469.59	519958/1000000	0.00	0.003	355.6	1324/1326 pairs	49/52 genes done
1474.71	521787/1000000	0.00	0.003	357.3	1324/1326 pairs	49/52 genes done
1479.81	523616/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
1485.18	525445/1000000	0.00	0.003	341.0	1324/1326 pairs	49/52 genes done
1490.36	527274/1000000	0.00	0.003	353.0	1324/1326 pairs	49/52 genes done
1495.99	529103/1000000	0.00	0.003	324.7	1324/1326 pairs	49/52 genes done
1501.33	530932/1000000	0.00	0.003	342.7	1324/1326 pairs	49/52 genes done
1506.44	532761/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
1511.53	534590/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
1516.68	536419/1000000	0.00	0.003	355.3	1324/1326 pairs	49/52 genes done
1521.84	538248/1000000	0.00	0.003	354.5	1324/1326 pairs	49/52 genes done
1526.97	540077/1000000	0.00	0.003	356.4	1324/1326 pairs	49/52 genes done
1532.08	541906/1000000	0.00	0.003	358.1	1324/1326 pairs	49/52 genes done
1537.32	543735/1000000	0.00	0.003	348.9	1324/1326 pairs	49/52 genes done
1543.10	545564/1000000	0.00	0.003	316.4	1324/1326 pairs	49/52 genes done
1548.26	547393/1000000	0.00	0.003	354.8	1324/1326 pairs	49/52 genes done
1553.54	549222/1000000	0.00	0.003	346.3	1324/1326 pairs	49/52 genes done
1559.05	551051/1000000	0.00	0.003	331.8	1324/1326 pairs	49/52 genes done
1564.61	552880/1000000	0.00	0.003	329.2	1324/1326 pairs	49/52 genes done
1569.96	554709/1000000	0.00	0.003	341.7	1324/1326 pairs	49/52 genes done
1575.03	556538/1000000	0.00	0.003	360.8	1324/1326 pairs	49/52 genes done
1580.08	558367/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
1585.14	560196/1000000	0.00	0.003	361.4	1324/1326 pairs	49/52 genes done
1590.19	562025/1000000	0.00	0.003	362.4	1324/1326 pairs	49/52 genes done
1595.27	563854/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
1600.31	565683/1000000	0.00	0.003	362.8	1324/1326 pairs	49/52 genes done
1605.35	567512/1000000	0.00	0.003	363.4	1324/1326 pairs	49/52 genes done
1610.40	569341/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
1615.47	571170/1000000	0.00	0.003	360.6	1324/1326 pairs	49/52 genes done
1620.53	572999/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
1625.58	574828/1000000	0.00	0.003	362.1	1324/1326 pairs	49/52 genes done
1631.22	576657/1000000	0.00	0.003	323.9	1324/1326 pairs	49/52 genes done
1636.33	578486/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
1641.48	580315/1000000	0.00	0.003	354.8	1324/1326 pairs	49/52 genes done
1646.56	582144/1000000	0.00	0.003	360.2	1324/1326 pairs	49/52 genes done
1651.67	583973/1000000	0.00	0.003	358.0	1324/1326 pairs	49/52 genes done
1656.74	585802/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
1661.97	587631/1000000	0.00	0.003	350.0	1324/1326 pairs	49/52 genes done
1667.26	589460/1000000	0.00	0.003	345.7	1324/1326 pairs	49/52 genes done
1674.46	591289/1000000	0.00	0.004	253.7	1324/1326 pairs	49/52 genes done
1679.70	593118/1000000	0.00	0.003	349.3	1324/1326 pairs	49/52 genes done
1684.81	594947/1000000	0.00	0.003	357.9	1324/1326 pairs	49/52 genes done
1689.91	596776/1000000	0.00	0.003	358.7	1324/1326 pairs	49/52 genes done
1695.02	598605/1000000	0.00	0.003	357.9	1324/1326 pairs	49/52 genes done
1700.10	600434/1000000	0.00	0.003	359.8	1324/1326 pairs	49/52 genes done
1705.17	602263/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
1710.30	604092/1000000	0.00	0.003	356.3	1324/1326 pairs	49/52 genes done
1715.42	605921/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
1720.49	607750/1000000	0.00	0.003	360.1	1324/1326 pairs	49/52 genes done
1725.59	609579/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
1730.70	611408/1000000	0.00	0.003	357.5	1324/1326 pairs	49/52 genes done
1735.80	613237/1000000	0.00	0.003	358.7	1324/1326 pairs	49/52 genes done
1740.92	615066/1000000	0.00	0.003	357.3	1324/1326 pairs	49/52 genes done
1746.12	616895/1000000	0.00	0.003	352.2	1324/1326 pairs	49/52 genes done
1751.47	618724/1000000	0.00	0.003	341.5	1324/1326 pairs	49/52 genes done
1756.57	620553/1000000	0.00	0.003	358.6	1324/1326 pairs	49/52 genes done
1761.62	622382/1000000	0.00	0.003	362.3	1324/1326 pairs	49/52 genes done
1767.14	624211/1000000	0.00	0.003	331.5	1324/1326 pairs	49/52 genes done
1772.21	626040/1000000	0.00	0.003	360.5	1324/1326 pairs	49/52 genes done
1777.27	627869/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
1782.40	629698/1000000	0.00	0.003	356.6	1324/1326 pairs	49/52 genes done
1787.48	631527/1000000	0.00	0.003	360.1	1324/1326 pairs	49/52 genes done
1792.57	633356/1000000	0.00	0.003	359.3	1324/1326 pairs	49/52 genes done
1797.66	635185/1000000	0.00	0.003	359.5	1324/1326 pairs	49/52 genes done
1802.73	637014/1000000	0.00	0.003	361.0	1324/1326 pairs	49/52 genes done
1807.78	638843/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
1812.83	640672/1000000	0.00	0.003	362.2	1324/1326 pairs	49/52 genes done
1817.88	642501/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
1822.91	644330/1000000	0.00	0.003	363.6	1324/1326 pairs	49/52 genes done
1828.14	646159/1000000	0.00	0.003	350.1	1324/1326 pairs	49/52 genes done
1833.19	647988/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
1838.25	649817/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
1843.31	651646/1000000	0.00	0.003	361.6	1324/1326 pairs	49/52 genes done
1848.34	653475/1000000	0.00	0.003	363.7	1324/1326 pairs	49/52 genes done
1853.38	655304/1000000	0.00	0.003	362.9	1324/1326 pairs	49/52 genes done
1858.47	657133/1000000	0.00	0.003	359.3	1324/1326 pairs	49/52 genes done
1863.53	658962/1000000	0.00	0.003	361.1	1324/1326 pairs	49/52 genes done
1868.59	660791/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
1873.67	662620/1000000	0.00	0.003	360.0	1324/1326 pairs	49/52 genes done
1878.70	664449/1000000	0.00	0.003	363.5	1324/1326 pairs	49/52 genes done
1883.86	666278/1000000	0.00	0.003	354.6	1324/1326 pairs	49/52 genes done
1888.89	668107/1000000	0.00	0.003	363.4	1324/1326 pairs	49/52 genes done
1894.02	669936/1000000	0.00	0.003	356.5	1324/1326 pairs	49/52 genes done
1899.08	671765/1000000	0.00	0.003	361.4	1324/1326 pairs	49/52 genes done
1904.14	673594/1000000	0.00	0.003	361.6	1324/1326 pairs	49/52 genes done
1909.19	675423/1000000	0.00	0.003	362.2	1324/1326 pairs	49/52 genes done
1914.22	677252/1000000	0.00	0.003	363.3	1324/1326 pairs	49/52 genes done
1919.26	679081/1000000	0.00	0.003	363.3	1324/1326 pairs	49/52 genes done
1925.19	680910/1000000	0.00	0.003	308.6	1324/1326 pairs	49/52 genes done
1930.24	682739/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
1935.29	684568/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
1940.35	686397/1000000	0.00	0.003	361.9	1324/1326 pairs	49/52 genes done
1945.41	688226/1000000	0.00	0.003	361.2	1324/1326 pairs	49/52 genes done
1950.46	690055/1000000	0.00	0.003	362.2	1324/1326 pairs	49/52 genes done
1955.56	691884/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
1960.83	693713/1000000	0.00	0.003	347.4	1324/1326 pairs	49/52 genes done
1965.94	695542/1000000	0.00	0.003	358.0	1324/1326 pairs	49/52 genes done
1971.05	697371/1000000	0.00	0.003	357.7	1324/1326 pairs	49/52 genes done
1976.16	699200/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
1981.21	701029/1000000	0.00	0.003	362.1	1324/1326 pairs	49/52 genes done
1986.29	702858/1000000	0.00	0.003	360.1	1324/1326 pairs	49/52 genes done
1991.47	704687/1000000	0.00	0.003	352.9	1324/1326 pairs	49/52 genes done
1996.58	706516/1000000	0.00	0.003	357.7	1324/1326 pairs	49/52 genes done
2001.67	708345/1000000	0.00	0.003	359.2	1324/1326 pairs	49/52 genes done
2006.77	710174/1000000	0.00	0.003	359.2	1324/1326 pairs	49/52 genes done
2011.89	712003/1000000	0.00	0.003	356.7	1324/1326 pairs	49/52 genes done
2017.00	713832/1000000	0.00	0.003	358.5	1324/1326 pairs	49/52 genes done
2022.08	715661/1000000	0.00	0.003	359.7	1324/1326 pairs	49/52 genes done
2027.40	717490/1000000	0.00	0.003	343.6	1324/1326 pairs	49/52 genes done
2032.52	719319/1000000	0.00	0.003	357.3	1324/1326 pairs	49/52 genes done
2037.63	721148/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
2042.75	722977/1000000	0.00	0.003	357.3	1324/1326 pairs	49/52 genes done
2047.90	724806/1000000	0.00	0.003	354.6	1324/1326 pairs	49/52 genes done
2053.04	726635/1000000	0.00	0.003	356.3	1324/1326 pairs	49/52 genes done
2058.14	728464/1000000	0.00	0.003	358.8	1324/1326 pairs	49/52 genes done
2063.24	730293/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
2068.35	732122/1000000	0.00	0.003	357.5	1324/1326 pairs	49/52 genes done
2073.43	733951/1000000	0.00	0.003	360.4	1324/1326 pairs	49/52 genes done
2078.58	735780/1000000	0.00	0.003	354.9	1324/1326 pairs	49/52 genes done
2083.67	737609/1000000	0.00	0.003	359.4	1324/1326 pairs	49/52 genes done
2088.73	739438/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
2093.79	741267/1000000	0.00	0.003	361.2	1324/1326 pairs	49/52 genes done
2098.84	743096/1000000	0.00	0.003	362.4	1324/1326 pairs	49/52 genes done
2103.90	744925/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
2108.96	746754/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
2114.03	748583/1000000	0.00	0.003	360.6	1324/1326 pairs	49/52 genes done
2119.10	750412/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
2124.14	752241/1000000	0.00	0.003	362.9	1324/1326 pairs	49/52 genes done
2129.17	754070/1000000	0.00	0.003	363.3	1324/1326 pairs	49/52 genes done
2134.25	755899/1000000	0.00	0.003	360.0	1324/1326 pairs	49/52 genes done
2139.33	757728/1000000	0.00	0.003	360.6	1324/1326 pairs	49/52 genes done
2144.39	759557/1000000	0.00	0.003	361.1	1324/1326 pairs	49/52 genes done
2149.48	761386/1000000	0.00	0.003	359.2	1324/1326 pairs	49/52 genes done
2154.55	763215/1000000	0.00	0.003	361.2	1324/1326 pairs	49/52 genes done
2159.63	765044/1000000	0.00	0.003	359.6	1324/1326 pairs	49/52 genes done
2164.69	766873/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
2169.75	768702/1000000	0.00	0.003	361.0	1324/1326 pairs	49/52 genes done
2174.82	770531/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
2179.88	772360/1000000	0.00	0.003	361.5	1324/1326 pairs	49/52 genes done
2184.93	774189/1000000	0.00	0.003	362.3	1324/1326 pairs	49/52 genes done
2189.98	776018/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
2195.04	777847/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
2200.13	779676/1000000	0.00	0.003	359.8	1324/1326 pairs	49/52 genes done
2205.18	781505/1000000	0.00	0.003	361.7	1324/1326 pairs	49/52 genes done
2210.27	783334/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
2215.33	785163/1000000	0.00	0.003	361.5	1324/1326 pairs	49/52 genes done
2220.40	786992/1000000	0.00	0.003	361.4	1324/1326 pairs	49/52 genes done
2225.45	788821/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
2230.50	790650/1000000	0.00	0.003	362.4	1324/1326 pairs	49/52 genes done
2235.58	792479/1000000	0.00	0.003	360.1	1324/1326 pairs	49/52 genes done
2240.64	794308/1000000	0.00	0.003	361.6	1324/1326 pairs	49/52 genes done
2245.69	796137/1000000	0.00	0.003	362.2	1324/1326 pairs	49/52 genes done
2250.78	797966/1000000	0.00	0.003	359.1	1324/1326 pairs	49/52 genes done
2255.86	799795/1000000	0.00	0.003	360.1	1324/1326 pairs	49/52 genes done
2260.94	801624/1000000	0.00	0.003	360.1	1324/1326 pairs	49/52 genes done
2266.01	803453/1000000	0.00	0.003	360.5	1324/1326 pairs	49/52 genes done
2271.09	805282/1000000	0.00	0.003	360.4	1324/1326 pairs	49/52 genes done
2276.17	807111/1000000	0.00	0.003	359.8	1324/1326 pairs	49/52 genes done
2281.24	808940/1000000	0.00	0.003	360.7	1324/1326 pairs	49/52 genes done
2286.32	810769/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
2291.39	812598/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
2296.44	814427/1000000	0.00	0.003	362.1	1324/1326 pairs	49/52 genes done
2301.52	816256/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
2306.57	818085/1000000	0.00	0.003	362.1	1324/1326 pairs	49/52 genes done
2311.65	819914/1000000	0.00	0.003	360.0	1324/1326 pairs	49/52 genes done
2316.71	821743/1000000	0.00	0.003	361.8	1324/1326 pairs	49/52 genes done
2321.78	823572/1000000	0.00	0.003	360.5	1324/1326 pairs	49/52 genes done
2326.83	825401/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
2331.92	827230/1000000	0.00	0.003	359.7	1324/1326 pairs	49/52 genes done
2336.99	829059/1000000	0.00	0.003	360.7	1324/1326 pairs	49/52 genes done
2342.05	830888/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
2347.33	832717/1000000	0.00	0.003	346.2	1324/1326 pairs	49/52 genes done
2352.42	834546/1000000	0.00	0.003	359.7	1324/1326 pairs	49/52 genes done
2357.53	836375/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
2362.61	838204/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
2367.69	840033/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
2372.79	841862/1000000	0.00	0.003	359.0	1324/1326 pairs	49/52 genes done
2377.84	843691/1000000	0.00	0.003	362.2	1324/1326 pairs	49/52 genes done
2382.90	845520/1000000	0.00	0.003	361.3	1324/1326 pairs	49/52 genes done
2387.95	847349/1000000	0.00	0.003	362.0	1324/1326 pairs	49/52 genes done
2393.08	849178/1000000	0.00	0.003	356.5	1324/1326 pairs	49/52 genes done
2398.16	851007/1000000	0.00	0.003	360.2	1324/1326 pairs	49/52 genes done
2403.22	852836/1000000	0.00	0.003	361.4	1324/1326 pairs	49/52 genes done
2408.29	854665/1000000	0.00	0.003	360.9	1324/1326 pairs	49/52 genes done
2413.37	856494/1000000	0.00	0.003	359.9	1324/1326 pairs	49/52 genes done
2418.44	858323/1000000	0.00	0.003	360.6	1324/1326 pairs	49/52 genes done
2423.55	860152/1000000	0.00	0.003	358.4	1324/1326 pairs	49/52 genes done
2428.64	861981/1000000	0.00	0.003	359.3	1324/1326 pairs	49/52 genes done
2433.75	863810/1000000	0.00	0.003	357.4	1324/1326 pairs	49/52 genes done
2438.98	865639/1000000	0.00	0.003	349.9	1324/1326 pairs	49/52 genes done
2444.16	867468/1000000	0.00	0.003	353.3	1324/1326 pairs	49/52 genes done
2449.34	869297/1000000	0.00	0.003	353.3	1324/1326 pairs	49/52 genes done
2454.50	871126/1000000	0.00	0.003	354.1	1324/1326 pairs	49/52 genes done
2459.69	872955/1000000	0.00	0.003	352.6	1324/1326 pairs	49/52 genes done
2464.88	874784/1000000	0.00	0.003	352.5	1324/1326 pairs	49/52 genes done
2470.10	876613/1000000	0.00	0.003	350.0	1324/1326 pairs	49/52 genes done
2475.26	878442/1000000	0.00	0.003	354.6	1324/1326 pairs	49/52 genes done
2480.43	880271/1000000	0.00	0.003	353.8	1324/1326 pairs	49/52 genes done
2485.60	882100/1000000	0.00	0.003	354.1	1324/1326 pairs	49/52 genes done
2490.70	883929/1000000	0.00	0.003	358.7	1324/1326 pairs	49/52 genes done
2495.87	885758/1000000	0.00	0.003	353.4	1324/1326 pairs	49/52 genes done
2501.06	887587/1000000	0.00	0.003	352.5	1324/1326 pairs	49/52 genes done
2506.17	889416/1000000	0.00	0.003	357.6	1324/1326 pairs	49/52 genes done
2511.63	891245/1000000	0.00	0.003	335.5	1324/1326 pairs	49/52 genes done
2518.14	893074/1000000	0.00	0.004	280.6	1324/1326 pairs	49/52 genes done
2523.42	894903/1000000	0.00	0.003	346.8	1324/1326 pairs	49/52 genes done
2528.56	896732/1000000	0.00	0.003	355.7	1324/1326 pairs	49/52 genes done
2533.67	898561/1000000	0.00	0.003	358.1	1324/1326 pairs	49/52 genes done
2538.94	900390/1000000	0.00	0.003	347.0	1324/1326 pairs	49/52 genes done
2544.04	902219/1000000	0.00	0.003	358.3	1324/1326 pairs	49/52 genes done
2549.34	904048/1000000	0.00	0.003	345.5	1324/1326 pairs	49/52 genes done
2554.52	905877/1000000	0.00	0.003	352.7	1324/1326 pairs	49/52 genes done
2559.70	907706/1000000	0.00	0.003	353.3	1324/1326 pairs	49/52 genes done
2564.89	909535/1000000	0.00	0.003	352.6	1324/1326 pairs	49/52 genes done
2570.03	911364/1000000	0.00	0.003	355.8	1324/1326 pairs	49/52 genes done
2575.14	913193/1000000	0.00	0.003	357.8	1324/1326 pairs	49/52 genes done
2580.24	915022/1000000	0.00	0.003	358.6	1324/1326 pairs	49/52 genes done
2585.34	916851/1000000	0.00	0.003	358.2	1324/1326 pairs	49/52 genes done
2590.89	918680/1000000	0.00	0.003	329.8	1324/1326 pairs	49/52 genes done
2596.14	920509/1000000	0.00	0.003	348.2	1324/1326 pairs	49/52 genes done
2601.44	922338/1000000	0.00	0.003	345.4	1324/1326 pairs	49/52 genes done
2606.67	924167/1000000	0.00	0.003	349.6	1324/1326 pairs	49/52 genes done
2611.85	925996/1000000	0.00	0.003	353.3	1324/1326 pairs	49/52 genes done
2617.01	927825/1000000	0.00	0.003	353.9	1324/1326 pairs	49/52 genes done
2622.38	929654/1000000	0.00	0.003	340.6	1324/1326 pairs	49/52 genes done
2627.58	931483/1000000	0.00	0.003	352.1	1324/1326 pairs	49/52 genes done
2632.77	933312/1000000	0.00	0.003	352.5	1324/1326 pairs	49/52 genes done
2638.01	935141/1000000	0.00	0.003	349.0	1324/1326 pairs	49/52 genes done
2643.15	936970/1000000	0.00	0.003	355.5	1324/1326 pairs	49/52 genes done
2648.34	938799/1000000	0.00	0.003	352.6	1324/1326 pairs	49/52 genes done
2653.49	940628/1000000	0.00	0.003	354.7	1324/1326 pairs	49/52 genes done
2658.91	942457/1000000	0.00	0.003	338.0	1324/1326 pairs	49/52 genes done
2664.05	944286/1000000	0.00	0.003	355.4	1324/1326 pairs	49/52 genes done
2669.18	946115/1000000	0.00	0.003	356.7	1324/1326 pairs	49/52 genes done
2674.25	947944/1000000	0.00	0.003	360.8	1324/1326 pairs	49/52 genes done
2679.39	949773/1000000	0.00	0.003	355.9	1324/1326 pairs	49/52 genes done
2684.54	951602/1000000	0.00	0.003	355.3	1324/1326 pairs	49/52 genes done
2689.70	953431/1000000	0.00	0.003	354.1	1324/1326 pairs	49/52 genes done
2694.83	955260/1000000	0.00	0.003	356.4	1324/1326 pairs	49/52 genes done
2700.01	957089/1000000	0.00	0.003	353.6	1324/1326 pairs	49/52 genes done
2705.13	958918/1000000	0.00	0.003	357.0	1324/1326 pairs	49/52 genes done
2710.25	960747/1000000	0.00	0.003	356.9	1324/1326 pairs	49/52 genes done
2715.38	962576/1000000	0.00	0.003	356.8	1324/1326 pairs	49/52 genes done
2720.48	964405/1000000	0.00	0.003	358.8	1324/1326 pairs	49/52 genes done
2725.68	966234/1000000	0.00	0.003	351.6	1324/1326 pairs	49/52 genes done
2730.88	968063/1000000	0.00	0.003	351.7	1324/1326 pairs	49/52 genes done
2736.03	969892/1000000	0.00	0.003	355.3	1324/1326 pairs	49/52 genes done
2741.22	971721/1000000	0.00	0.003	352.5	1324/1326 pairs	49/52 genes done
2746.38	973550/1000000	0.00	0.003	353.9	1324/1326 pairs	49/52 genes done
2751.49	975379/1000000	0.00	0.003	358.2	1324/1326 pairs	49/52 genes done
2756.60	977208/1000000	0.00	0.003	357.9	1324/1326 pairs	49/52 genes done
2762.07	979037/1000000	0.00	0.003	334.6	1324/1326 pairs	49/52 genes done
2769.37	980866/1000000	0.00	0.004	250.5	1324/1326 pairs	49/52 genes done
2774.58	982695/1000000	0.00	0.003	351.0	1324/1326 pairs	49/52 genes done
2779.74	984524/1000000	0.00	0.003	354.4	1324/1326 pairs	49/52 genes done
2784.89	986353/1000000	0.00	0.003	355.1	1324/1326 pairs	49/52 genes done
2790.13	988182/1000000	0.00	0.003	349.0	1324/1326 pairs	49/52 genes done
2795.77	990011/1000000	0.00	0.003	324.4	1324/1326 pairs	49/52 genes done
2800.91	991840/1000000	0.00	0.003	356.0	1324/1326 pairs	49/52 genes done
2806.27	993669/1000000	0.00	0.003	341.3	1324/1326 pairs	49/52 genes done
2811.52	995498/1000000	0.00	0.003	348.3	1324/1326 pairs	49/52 genes done
2816.70	997327/1000000	0.00	0.003	353.0	1324/1326 pairs	49/52 genes done
2821.85	999156/1000000	0.00	0.003	355.0	1324/1326 pairs	49/52 genes done

Top gene-gene pairs:
BRAF	NRAS	<0.000001	<0.001326	anti-correlated
BRAF	HRAS	0.000033	0.022072	anti-correlated
BRAF	TG	0.008992	0.987635	anti-correlated
LMX1B	TYSND1	0.012365	0.987635	correlated
KIAA0182	MEGF6	0.013289	0.987635	correlated
C9orf150	POTEE	0.013605	0.987635	correlated
BRAF	EIF1AX	0.014682	0.987635	anti-correlated
MEGF6	ZNF704	0.016461	0.987635	correlated
ACRC	TROAP	0.018518	0.987635	correlated
ACRC	ZNF479	0.018518	0.987635	correlated
PVRL4	SYNPO2L	0.018518	0.987635	correlated
ACRC	SOLH	0.018519	0.987635	correlated
TG	ZNF799	0.022222	0.987635	correlated
KIF25	PVRL4	0.022857	0.987635	correlated
GLI2	SYNPO2L	0.027691	0.987635	correlated
DPYS	POU4F2	0.031008	0.987635	correlated
POTEE	SYNPO2L	0.036364	0.987635	correlated
SF3B2	ZNF704	0.042105	0.987635	correlated
EMG1	SOLH	0.042553	0.987635	correlated
PVRL4	ZNF878	0.043478	0.987635	correlated
MUC7	TROAP	0.045865	0.987635	correlated
PRG4	SLC26A11	0.047059	0.987635	correlated
TROAP	ZNF479	0.049383	0.987635	correlated
KCNN2	OR56A1	0.050000	0.987635	correlated
KIF25	ZNF878	0.050000	0.987635	correlated
NRAS	TG	0.050633	0.987635	none
TMEM90B	ZNF845	0.054866	0.987635	none
BRAF	PPM1D	0.056993	0.987635	none
C10orf71	SF3B2	0.057143	0.987635	none
CCDC15	SOLH	0.059701	0.987635	none
CORO1B	PPM1D	0.062500	0.987635	none
C10orf71	SYNPO2L	0.064516	0.987635	none
MUC7	PVRL4	0.066667	0.987635	none
ACRC	CCDC15	0.067797	0.987635	none
C9orf150	POLDIP2	0.070175	0.987635	none
RPTN	SLC26A11	0.072698	0.987635	none
IL32	POLDIP2	0.072698	0.987635	none
CCDC15	ZNF799	0.075494	0.987635	none
ARID1B	NRAS	0.076511	0.987635	none
CHEK2	NRAS	0.078431	0.987635	none
BRAF	KRAS	0.080437	0.987635	none
EIF1AX	KCNN2	0.081633	0.987635	none
CCDC15	ZNF845	0.090031	0.987635	none
ACRC	MUC7	0.090909	0.987635	none
C10orf71	POTEE	0.093023	0.987635	none
MAP3K3	RPTN	0.095881	0.987635	none
PRG4	RPTN	0.095881	0.987635	none
TG	ZNF704	0.096764	0.987635	none
SF3B2	TG	0.096764	0.987635	none
ACRC	ZNF845	0.097561	0.987635	none
BRAF	MAP3K3	0.101569	0.987635	none
BRAF	PRG4	0.101569	0.987635	none
KIAA0182	POLDIP2	0.114286	0.987635	none
MUC7	ZNF479	0.117647	0.987635	none
MUC7	POLDIP2	0.118555	0.987635	none
NRAS	RPTN	0.129211	0.987635	none
ARID1B	RPTN	0.140729	0.987635	none
IL32	TG	0.141785	0.987635	none
SOLH	ZNF845	0.142857	0.987635	none
NRAS	PPIL6	0.154741	0.987635	none
Analyzing power per gene...
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Generating gene coverage plots...
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/1.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/2.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/3.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/4.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/5.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/6.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/7.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/8.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/9.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/10.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/11.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/12.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/13.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/14.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/15.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/16.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/17.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/18.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/19.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/20.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/21.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/22.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/23.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/24.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/25.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/26.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/27.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/28.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/29.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/30.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/31.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/32.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/33.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/34.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/35.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/36.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/37.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/38.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/39.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/40.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/41.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/42.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/43.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/44.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/45.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/46.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/47.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/48.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/49.png
Superimposing mutations
Outputting figure to ./THCA.gene_coverage_plots/50.png
generate_gene_coverage_plots finished
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 0 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200
*** Prepare stdandard out:
cat: prepare.out: No such file or directory
*** Prepare stdandard err:
cat: prepare.err: No such file or directory
*** Scatter stdandard out:
Sender: LSF System <lsf@node1649>
Subject: Job 8704094: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1649>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000001> was used as the working directory.
Started at Thu Nov 15 19:31:11 2012
Results reported at Thu Nov 15 19:34:00 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000001.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000001.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 1  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000001.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    190.67 sec.
    Max Memory :      6107 MB
    Max Swap   :      8473 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
1
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 1
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 1: processing genes 1 - 90
Calculating significance of each gene.
Using projection method.
1	A1BG	1
2	A1CF	1
3	A2BP1	1
4	A2M	3.265361e-01
5	A2ML1	2.487552e-01
6	A4GALT	1
7	A4GNT	1
8	AAAS	1
9	AACS	1
10	AADAC	1
11	AADACL2	1.708604e-01
12	AADACL3	1
13	AADACL4	1
14	AADAT	1
15	AAGAB	1
16	AAK1	1
17	AAMP	1
18	AANAT	1
19	AARS	1
20	AARS2	1
21	AARSD1	1
22	AASDH	3.234945e-01
23	AASDHPPT	1
24	AASS	1
25	AATF	1
26	AATK	1
27	ABAT	1
28	ABCA1	5.437582e-01
29	ABCA10	1
30	ABCA12	1
31	ABCA13	1
32	ABCA2	1
33	ABCA3	1
34	ABCA4	1
35	ABCA5	8.787116e-02
36	ABCA6	3.761659e-01
37	ABCA7	1
38	ABCA8	1
39	ABCA9	1
40	ABCB1	1
41	ABCB10	1
In gene ABCB11 the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 3748    n = 1	mu =   2.33e-07
42	ABCB11	7.692961e-02
43	ABCB4	4.633374e-01
44	ABCB5	2.302555e-01
45	ABCB6	1
46	ABCB7	1.090692e-02
47	ABCB8	1
48	ABCB9	1
49	ABCC1	1
50	ABCC10	3.738029e-01
51	ABCC11	1
52	ABCC12	1
53	ABCC2	1.036605e-01
54	ABCC3	1
In gene ABCC4 the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 6	N = 4060    n = 1	mu =   6.65e-08
55	ABCC4	1.838158e-01
56	ABCC5	4.942311e-01
57	ABCC6	3.913322e-01
58	ABCC8	1
59	ABCC9	1
60	ABCD1	1.334597e-03
61	ABCD2	1
62	ABCD3	1
63	ABCD4	1
64	ABCE1	1
65	ABCF1	1.078790e-01
66	ABCF2	1
67	ABCF3	1
68	ABCG1	1
69	ABCG2	1
70	ABCG4	1
71	ABCG5	1
72	ABCG8	3.514878e-02
73	ABHD1	1
74	ABHD10	1
75	ABHD11	1
76	ABHD12	1
77	ABHD12B	1
78	ABHD13	1
79	ABHD14A	1
80	ABHD14B	1
81	ABHD15	1
82	ABHD2	1.800516e-01
83	ABHD3	1
84	ABHD4	1.248439e-02
85	ABHD5	1
86	ABHD6	1
87	ABHD8	1
88	ABI1	1
89	ABI2	2.143007e-02
90	ABI3	1
Done

Running MutSig 2:
Scatter job 1: processing genes 1 - 90
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ABCD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.637165e-02	ci left: 6.792186e-01	ci right 6.974716e-01	k: 6884	n:10000
KS ci ratio: 4.666725e-02	ci left: 4.039239e-01	ci right 4.233264e-01	k: 4136	n:10000
ABCD1   10000 perm   2 sec   (5436 perm/sec)   p_kst 4.136000e-01   p_cons 6.884000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000001/ABCD1.3_2278_10000_0.4136_0.6884_1.png
                gene_name: ABCD1
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.69 
      ci_cons_bounds_left: 0.68 
     ci_cons_bounds_right: 0.70 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 11 percent done.
ABCA3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.882037e-02	ci left: 3.823146e-01	ci right 4.015484e-01	k: 3919	n:10000
Cons ci ratio: 1.940461e-02	ci left: 7.952698e-01	ci right 8.109533e-01	k: 8032	n:10000
KS ci ratio: 1.319447e-01	ci left: 7.572512e-02	ci right 8.652038e-02	k: 810	n:10000
ABCA3   10000 perm   2 sec   (4863 perm/sec)   p_kst 8.100000e-02   p_cons 8.032000e-01   p_joint 3.919000e-01

Joint ci ratio: 4.746533e-02	ci left: 2.482263e-01	ci right 2.603452e-01	k: 5085	n:20000
Cons ci ratio: 1.384440e-02	ci left: 7.947415e-01	ci right 8.058710e-01	k: 16007	n:20000
KS ci ratio: 9.286544e-02	ci left: 7.798885e-02	ci right 8.563325e-02	k: 1635	n:20000
ABCA3   20000 perm   5 sec   (4292 perm/sec)   p_kst 8.175000e-02   p_cons 8.003500e-01   p_joint 2.542500e-01

Outputting figure to mutsig2_images.part000000000001/ABCA3.2_5235_20000_0.08175_0.80035_0.25425.png
                gene_name: ABCA3
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.082 
        ci_ks_bounds_left: 0.078 
       ci_ks_bounds_right: 0.086 
                   p_cons: 0.80 
      ci_cons_bounds_left: 0.79 
     ci_cons_bounds_right: 0.81 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.25 
    ci_joint_bounds_right: 0.26 

Current progress: 22 percent done.
ABCA5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.997850e-02	ci left: 2.902347e-01	ci right 3.082824e-01	k: 2992	n:10000
Cons ci ratio: 7.667657e-02	ci left: 1.991939e-01	ci right 2.151771e-01	k: 2071	n:10000
KS ci ratio: 3.153859e-02	ci left: 5.973472e-01	ci right 6.165905e-01	k: 6070	n:10000
ABCA5   10000 perm   2 sec   (4956 perm/sec)   p_kst 6.070000e-01   p_cons 2.071000e-01   p_joint 2.992000e-01

Outputting figure to mutsig2_images.part000000000001/ABCA5.2_5081_10000_0.607_0.2071_0.2992.png
                gene_name: ABCA5
               theta_stop: 0.077 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.20 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.31 

Current progress: 33 percent done.
ABCB11
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.814273e-02	ci left: 3.033218e-01	ci right 3.215876e-01	k: 3124	n:10000
KS ci ratio: 9.463632e-03	ci left: 9.403504e-01	ci right 9.493882e-01	k: 9450	n:10000
ABCB11   10000 perm   2 sec   (5318 perm/sec)   p_kst 9.450000e-01   p_cons 3.124000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000001/ABCB11.2_4074_10000_0.945_0.3124_1.png
                gene_name: ABCB11
               theta_stop: 0.058 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.94 
       ci_ks_bounds_right: 0.95 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.30 
     ci_cons_bounds_right: 0.32 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 44 percent done.
ABCB7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.205944e-02	ci left: 9.079222e-01	ci right 9.190356e-01	k: 9136	n:10000
KS ci ratio: 5.025312e-02	ci left: 3.686820e-01	ci right 3.877890e-01	k: 3782	n:10000
ABCB7   10000 perm   2 sec   (5936 perm/sec)   p_kst 3.782000e-01   p_cons 9.136000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000001/ABCB7.2_2326_10000_0.3782_0.9136_1.png
                gene_name: ABCB7
               theta_stop: 0.050 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.39 
                   p_cons: 0.91 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.92 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 56 percent done.
ABCC2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.078242e-02	ci left: 7.723578e-01	ci right 7.886785e-01	k: 7806	n:10000
KS ci ratio: 1.801178e-02	ci left: 8.181200e-01	ci right 8.330898e-01	k: 8257	n:10000
ABCC2   10000 perm   2 sec   (5048 perm/sec)   p_kst 8.257000e-01   p_cons 7.806000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000001/ABCC2.2_4766_10000_0.8257_0.7806_1.png
                gene_name: ABCC2
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.79 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
ABCG8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.487317e-02	ci left: 8.675412e-01	ci right 8.806401e-01	k: 8742	n:10000
Cons ci ratio: 3.545313e-02	ci left: 5.401859e-01	ci right 5.597849e-01	k: 5500	n:10000
KS ci ratio: 2.080668e-02	ci left: 7.719526e-01	ci right 7.882839e-01	k: 7802	n:10000
ABCG8   10000 perm   2 sec   (6026 perm/sec)   p_kst 7.802000e-01   p_cons 5.500000e-01   p_joint 8.742000e-01

Outputting figure to mutsig2_images.part000000000001/ABCG8.2_2074_10000_0.7802_0.55_0.8742.png
                gene_name: ABCG8
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.87 
    ci_joint_bounds_right: 0.88 

Current progress: 78 percent done.
ABHD4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.276977e-02	ci left: 3.461116e-01	ci right 3.649727e-01	k: 3555	n:10000
KS ci ratio: 1.763111e-01	ci left: 4.293441e-02	ci right 5.133194e-02	k: 470	n:10000
ABHD4   10000 perm   2 sec   (6451 perm/sec)   p_kst 4.700000e-02   p_cons 3.555000e-01   p_joint 1

Joint ci ratio: 8.666425e-02	ci left: 8.876415e-02	ci right 9.685468e-02	k: 1855	n:20000
Cons ci ratio: 3.923383e-02	ci left: 3.263686e-01	ci right 3.394800e-01	k: 6658	n:20000
KS ci ratio: 1.260847e-01	ci left: 4.318641e-02	ci right 4.904646e-02	k: 921	n:20000
ABHD4   20000 perm   4 sec   (5666 perm/sec)   p_kst 4.605000e-02   p_cons 3.329000e-01   p_joint 9.275000e-02

Joint ci ratio: 4.719474e-02	ci left: 1.825356e-01	ci right 1.913918e-01	k: 5608	n:30000
Cons ci ratio: 3.227985e-02	ci left: 3.242144e-01	ci right 3.348853e-01	k: 9886	n:30000
KS ci ratio: 1.010481e-01	ci left: 4.534800e-02	ci right 5.020672e-02	k: 1432	n:30000
ABHD4   30000 perm   6 sec   (5161 perm/sec)   p_kst 4.773333e-02   p_cons 3.295333e-01   p_joint 1.869333e-01

Joint ci ratio: 3.154371e-03	ci left: 9.731909e-01	ci right 9.762896e-01	k: 38991	n:40000
Cons ci ratio: 2.789781e-02	ci left: 3.258404e-01	ci right 3.350843e-01	k: 13218	n:40000
KS ci ratio: 8.750253e-02	ci left: 4.568071e-02	ci right 4.988525e-02	k: 1910	n:40000
ABHD4   40000 perm   8 sec   (4755 perm/sec)   p_kst 4.775000e-02   p_cons 3.304500e-01   p_joint 9.747750e-01

Outputting figure to mutsig2_images.part000000000001/ABHD4.2_1057_40000_0.04775_0.33045_0.97477.png
                gene_name: ABHD4
               theta_stop: 0.088 
                    nperm: 40000 
                     p_ks: 0.048 
        ci_ks_bounds_left: 0.046 
       ci_ks_bounds_right: 0.050 
                   p_cons: 0.33 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.34 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.98 

Current progress: 89 percent done.
ABI2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.677804e-02	ci left: 8.379602e-01	ci right 8.522382e-01	k: 8452	n:10000
Cons ci ratio: 1.947820e-02	ci left: 7.940522e-01	ci right 8.097715e-01	k: 8020	n:10000
KS ci ratio: 4.381445e-02	ci left: 4.347281e-01	ci right 4.543042e-01	k: 4445	n:10000
ABI2   10000 perm   2 sec   (6367 perm/sec)   p_kst 4.445000e-01   p_cons 8.020000e-01   p_joint 8.452000e-01

Outputting figure to mutsig2_images.part000000000001/ABI2.2_1468_10000_0.4445_0.802_0.8452.png
                gene_name: ABI2
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.44 
        ci_ks_bounds_left: 0.43 
       ci_ks_bounds_right: 0.45 
                   p_cons: 0.80 
      ci_cons_bounds_left: 0.79 
     ci_cons_bounds_right: 0.81 
                  p_joint: 0.85 
     ci_joint_bounds_left: 0.84 
    ci_joint_bounds_right: 0.85 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000001
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 1 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1699>
Subject: Job 8704095: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1699>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000002> was used as the working directory.
Started at Thu Nov 15 19:31:11 2012
Results reported at Thu Nov 15 22:22:54 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000002.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000002.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 2  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000002.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10466.03 sec.
    Max Memory :      5949 MB
    Max Swap   :      8542 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
2
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 2
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 2: processing genes 91 - 181
Calculating significance of each gene.
Using projection method.
91	ABI3BP	1.804739e-01
92	ABL1	1.800891e-01
93	ABL2	1.294267e-01
94	ABLIM1	1
95	ABLIM2	1
96	ABLIM3	1
97	ABO	1
In gene ABP1 the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 2267    n = 1	mu =   6.92e-08
98	ABP1	2.854972e-02
99	ABR	2.767042e-01
100	ABRA	1
101	ABT1	1
102	ABTB1	1
103	ABTB2	1
104	ACAA1	1
105	ACAA2	1
106	ACACA	3.814220e-01
107	ACACB	5.493162e-01
108	ACAD10	8.937401e-02
109	ACAD11	1
110	ACAD8	1
111	ACAD9	1
112	ACADL	1
113	ACADM	1
114	ACADS	1
115	ACADSB	1
116	ACADVL	1
117	ACAN	4.452304e-01
118	ACAP1	5.563917e-02
119	ACAP2	1
120	ACAP3	1
121	ACAT1	1
122	ACAT2	1
123	ACBD3	1
124	ACBD4	1
125	ACBD5	6.203511e-03
126	ACBD6	1
127	ACBD7	1
128	ACCN1	1
129	ACCN2	1
130	ACCN3	1
131	ACCN4	1
132	ACCN5	1
133	ACCS	1
134	ACCSL	1
In gene ACD the following bins exceed PROBCAP:
    THCA-EM-A2OX-TP	categ 4	N = 607     n = 1	mu =   1.41e-07
135	ACD	1.151232e-03
136	ACE	3.002034e-01
137	ACE2	1
138	ACER1	1
139	ACER2	1
140	ACER3	1
141	ACHE	1
142	ACIN1	1
143	ACLY	2.743970e-01
144	ACMSD	1
145	ACN9	1
146	ACO1	1
147	ACO2	1
148	ACOT1	1
149	ACOT11	1
150	ACOT12	3.092320e-02
151	ACOT13	1
152	ACOT2	2.405584e-02
153	ACOT4	1
154	ACOT6	1
155	ACOT7	1
156	ACOT8	1
157	ACOT9	1
158	ACOX1	1
159	ACOX2	1
160	ACOX3	1
161	ACOXL	1
162	ACP1	1
163	ACP2	1
164	ACP5	1
165	ACP6	1
166	ACPL2	1
167	ACPP	1
168	ACPT	1
169	ACR	1
170	ACRBP	1
171	ACRC	9.572328e-03
172	ACRV1	1
173	ACSBG1	1
174	ACSBG2	1
175	ACSF2	1
176	ACSF3	1
177	ACSL1	1
178	ACSL3	1
179	ACSL4	1
180	ACSL5	1
181	ACSL6	1
Done

Running MutSig 2:
Scatter job 2: processing genes 91 - 181
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ACRC
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.937057e-01	ci left: 1.492852e-02	ci right 2.015795e-02	k: 174	n:10000
Cons ci ratio: 2.566102e-02	ci left: 6.909110e-01	ci right 7.089724e-01	k: 7000	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
ACRC   10000 perm   2 sec   (4599 perm/sec)   p_kst 1.000000e-04   p_cons 7.000000e-01   p_joint 1.740000e-02

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 1.854392e-02	ci left: 6.843425e-01	ci right 6.972020e-01	k: 13816	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
ACRC   20000 perm   9 sec   (2249 perm/sec)   p_kst 5.000000e-05   p_cons 6.908000e-01   p_joint 0

Joint ci ratio: 3.919869e+00	ci left: 0	ci right 1.229551e-04	k: 0	n:30000
Cons ci ratio: 1.461866e-02	ci left: 7.004061e-01	ci right 7.107540e-01	k: 21168	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
ACRC   30000 perm   11 sec   (2632 perm/sec)   p_kst 3.333333e-05   p_cons 7.056000e-01   p_joint 0

Joint ci ratio: 3.919902e+00	ci left: 0	ci right 9.221773e-05	k: 0	n:40000
Cons ci ratio: 1.265409e-02	ci left: 7.013071e-01	ci right 7.102630e-01	k: 28232	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
ACRC   40000 perm   14 sec   (2920 perm/sec)   p_kst 2.500000e-05   p_cons 7.058000e-01   p_joint 0

Joint ci ratio: 3.261927e-01	ci left: 2.410984e-03	ci right 3.368181e-03	k: 143	n:50000
Cons ci ratio: 1.133455e-02	ci left: 7.011816e-01	ci right 7.091945e-01	k: 35260	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
ACRC   50000 perm   16 sec   (3117 perm/sec)   p_kst 2.000000e-05   p_cons 7.052000e-01   p_joint 2.860000e-03

Joint ci ratio: 3.020084e-01	ci left: 2.377659e-03	ci right 3.238221e-03	k: 167	n:60000
Cons ci ratio: 1.035363e-02	ci left: 7.012659e-01	ci right 7.085810e-01	k: 42296	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
ACRC   60000 perm   18 sec   (3254 perm/sec)   p_kst 1.666667e-05   p_cons 7.049333e-01   p_joint 2.783333e-03

Joint ci ratio: 3.333611e-01	ci left: 1.643397e-03	ci right 2.313250e-03	k: 137	n:70000
Cons ci ratio: 9.583419e-03	ci left: 7.016347e-01	ci right 7.084054e-01	k: 49352	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
ACRC   70000 perm   21 sec   (3346 perm/sec)   p_kst 1.428571e-05   p_cons 7.050286e-01   p_joint 1.957143e-03

Joint ci ratio: 3.298304e-01	ci left: 1.472328e-03	ci right 2.064743e-03	k: 140	n:80000
Cons ci ratio: 8.954586e-03	ci left: 7.023152e-01	ci right 7.086449e-01	k: 56439	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
ACRC   80000 perm   23 sec   (3406 perm/sec)   p_kst 1.250000e-05   p_cons 7.054875e-01   p_joint 1.750000e-03

Joint ci ratio: 3.448874e-01	ci left: 1.186659e-03	ci right 1.690800e-03	k: 128	n:90000
Cons ci ratio: 8.443119e-03	ci left: 7.024653e-01	ci right 7.084325e-01	k: 63491	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
ACRC   90000 perm   26 sec   (3444 perm/sec)   p_kst 1.111111e-05   p_cons 7.054556e-01   p_joint 1.422222e-03

Joint ci ratio: 4.062940e-01	ci left: 7.417123e-04	ci right 1.128181e-03	k: 92	n:100000
Cons ci ratio: 7.761762e-03	ci left: 7.155609e-01	ci right 7.211465e-01	k: 71836	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
ACRC   100000 perm   29 sec   (3465 perm/sec)   p_kst 1.000000e-05   p_cons 7.183600e-01   p_joint 9.200000e-04

Joint ci ratio: 3.958016e-01	ci left: 7.151515e-04	ci right 1.075639e-03	k: 97	n:110000
Cons ci ratio: 7.397660e-03	ci left: 7.158503e-01	ci right 7.211746e-01	k: 79037	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
ACRC   110000 perm   32 sec   (3476 perm/sec)   p_kst 9.090909e-06   p_cons 7.185182e-01   p_joint 8.818182e-04

Joint ci ratio: 4.041571e-01	ci left: 6.255692e-04	ci right 9.493445e-04	k: 93	n:120000
Cons ci ratio: 7.314997e-03	ci left: 7.026947e-01	ci right 7.078621e-01	k: 84634	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
ACRC   120000 perm   35 sec   (3478 perm/sec)   p_kst 8.333333e-06   p_cons 7.052833e-01   p_joint 7.750000e-04

Joint ci ratio: 3.879840e-01	ci left: 6.328598e-04	ci right 9.439531e-04	k: 101	n:130000
Cons ci ratio: 7.029042e-03	ci left: 7.027362e-01	ci right 7.077008e-01	k: 91679	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
ACRC   130000 perm   37 sec   (3472 perm/sec)   p_kst 7.692308e-06   p_cons 7.052231e-01   p_joint 7.769231e-04

Joint ci ratio: 4.437274e-01	ci left: 4.340750e-04	ci right 6.873584e-04	k: 77	n:140000
Cons ci ratio: 6.770242e-03	ci left: 7.030186e-01	ci right 7.078015e-01	k: 98758	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
ACRC   140000 perm   40 sec   (3460 perm/sec)   p_kst 7.142857e-06   p_cons 7.054143e-01   p_joint 5.500000e-04

Joint ci ratio: 4.275859e-01	ci left: 4.407503e-04	ci right 6.858944e-04	k: 83	n:150000
Cons ci ratio: 6.773678e-03	ci left: 6.883139e-01	ci right 6.929988e-01	k: 103599	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
ACRC   150000 perm   44 sec   (3442 perm/sec)   p_kst 6.666667e-06   p_cons 6.906600e-01   p_joint 5.533333e-04

Joint ci ratio: 4.130868e-01	ci left: 4.467375e-04	ci right 6.844696e-04	k: 89	n:160000
Cons ci ratio: 6.558645e-03	ci left: 6.883848e-01	ci right 6.929208e-01	k: 110505	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
ACRC   160000 perm   47 sec   (3411 perm/sec)   p_kst 6.250000e-06   p_cons 6.906562e-01   p_joint 5.562500e-04

Joint ci ratio: 4.063727e-01	ci left: 4.362862e-04	ci right 6.636642e-04	k: 92	n:170000
Cons ci ratio: 6.371106e-03	ci left: 6.878955e-01	ci right 6.922980e-01	k: 117317	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
ACRC   170000 perm   50 sec   (3391 perm/sec)   p_kst 5.882353e-06   p_cons 6.901000e-01   p_joint 5.411765e-04

Joint ci ratio: 3.979073e-01	ci left: 4.320224e-04	ci right 6.512529e-04	k: 96	n:180000
Cons ci ratio: 6.188306e-03	ci left: 6.881860e-01	ci right 6.924634e-01	k: 124259	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
ACRC   180000 perm   54 sec   (3323 perm/sec)   p_kst 5.555556e-06   p_cons 6.903278e-01   p_joint 5.333333e-04

Joint ci ratio: 3.918958e-01	ci left: 4.235054e-04	ci right 6.343269e-04	k: 99	n:190000
Cons ci ratio: 6.025649e-03	ci left: 6.880731e-01	ci right 6.922369e-01	k: 131130	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
ACRC   190000 perm   58 sec   (3270 perm/sec)   p_kst 5.263158e-06   p_cons 6.901579e-01   p_joint 5.210526e-04

Joint ci ratio: 5.435342e-01	ci left: 1.898700e-04	ci right 3.352644e-04	k: 51	n:200000
Cons ci ratio: 5.872362e-03	ci left: 6.881782e-01	ci right 6.922363e-01	k: 138042	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
ACRC   200000 perm   62 sec   (3228 perm/sec)   p_kst 5.000000e-06   p_cons 6.902100e-01   p_joint 2.550000e-04

Joint ci ratio: 3.919981e+00	ci left: 0	ci right 1.756594e-05	k: 0	n:210000
Cons ci ratio: 5.732760e-03	ci left: 6.880837e-01	ci right 6.920444e-01	k: 144914	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
ACRC   210000 perm   67 sec   (3147 perm/sec)   p_kst 4.761905e-06   p_cons 6.900667e-01   p_joint 0

Joint ci ratio: 3.919982e+00	ci left: 0	ci right 1.676749e-05	k: 0	n:220000
Cons ci ratio: 5.607841e-03	ci left: 6.876028e-01	ci right 6.914741e-01	k: 151699	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
ACRC   220000 perm   71 sec   (3100 perm/sec)   p_kst 4.545455e-06   p_cons 6.895409e-01   p_joint 0

Joint ci ratio: 3.919983e+00	ci left: 0	ci right 1.603848e-05	k: 0	n:230000
Cons ci ratio: 5.483820e-03	ci left: 6.877047e-01	ci right 6.914906e-01	k: 158608	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
ACRC   230000 perm   76 sec   (3037 perm/sec)   p_kst 4.347826e-06   p_cons 6.896000e-01   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.537021e-05	k: 0	n:240000
Cons ci ratio: 5.366322e-03	ci left: 6.879074e-01	ci right 6.916130e-01	k: 165543	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
ACRC   240000 perm   80 sec   (2982 perm/sec)   p_kst 4.166667e-06   p_cons 6.897625e-01   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.475541e-05	k: 0	n:250000
Cons ci ratio: 5.260093e-03	ci left: 6.877662e-01	ci right 6.913974e-01	k: 172396	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
ACRC   250000 perm   84 sec   (2966 perm/sec)   p_kst 4.000000e-06   p_cons 6.895840e-01   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.418790e-05	k: 0	n:260000
Cons ci ratio: 4.815190e-03	ci left: 7.164972e-01	ci right 7.199594e-01	k: 186740	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
ACRC   260000 perm   88 sec   (2949 perm/sec)   p_kst 3.846154e-06   p_cons 7.182308e-01   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.366242e-05	k: 0	n:270000
Cons ci ratio: 5.242226e-03	ci left: 6.725991e-01	ci right 6.761379e-01	k: 182080	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
ACRC   270000 perm   92 sec   (2928 perm/sec)   p_kst 3.703704e-06   p_cons 6.743704e-01   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.317448e-05	k: 0	n:280000
Cons ci ratio: 5.150348e-03	ci left: 6.724104e-01	ci right 6.758860e-01	k: 188762	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
ACRC   280000 perm   96 sec   (2910 perm/sec)   p_kst 3.571429e-06   p_cons 6.741500e-01   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.272019e-05	k: 0	n:290000
Cons ci ratio: 5.062140e-03	ci left: 6.723216e-01	ci right 6.757370e-01	k: 195469	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
ACRC   290000 perm   100 sec   (2891 perm/sec)   p_kst 3.448276e-06   p_cons 6.740310e-01   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.229619e-05	k: 0	n:300000
Cons ci ratio: 4.977559e-03	ci left: 6.723059e-01	ci right 6.756640e-01	k: 202196	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
ACRC   300000 perm   105 sec   (2871 perm/sec)   p_kst 3.333333e-06   p_cons 6.739867e-01   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.189954e-05	k: 0	n:310000
Cons ci ratio: 4.895787e-03	ci left: 6.724081e-01	ci right 6.757113e-01	k: 208959	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
ACRC   310000 perm   109 sec   (2851 perm/sec)   p_kst 3.225806e-06   p_cons 6.740613e-01   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.152768e-05	k: 0	n:320000
Cons ci ratio: 4.819047e-03	ci left: 6.724009e-01	ci right 6.756522e-01	k: 215689	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
ACRC   320000 perm   113 sec   (2830 perm/sec)   p_kst 3.125000e-06   p_cons 6.740281e-01   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.117836e-05	k: 0	n:330000
Cons ci ratio: 4.743352e-03	ci left: 6.726222e-01	ci right 6.758232e-01	k: 222494	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
ACRC   330000 perm   117 sec   (2809 perm/sec)   p_kst 3.030303e-06   p_cons 6.742242e-01   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.084959e-05	k: 0	n:340000
Cons ci ratio: 4.670613e-03	ci left: 6.728779e-01	ci right 6.760309e-01	k: 229315	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
ACRC   340000 perm   122 sec   (2788 perm/sec)   p_kst 2.941176e-06   p_cons 6.744559e-01   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.053960e-05	k: 0	n:350000
Cons ci ratio: 4.604621e-03	ci left: 6.727846e-01	ci right 6.758925e-01	k: 236019	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
ACRC   350000 perm   126 sec   (2767 perm/sec)   p_kst 2.857143e-06   p_cons 6.743400e-01   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.024683e-05	k: 0	n:360000
Cons ci ratio: 4.540603e-03	ci left: 6.727691e-01	ci right 6.758336e-01	k: 242749	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
ACRC   360000 perm   131 sec   (2746 perm/sec)   p_kst 2.777778e-06   p_cons 6.743028e-01   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 9.969895e-06	k: 0	n:370000
Cons ci ratio: 4.477832e-03	ci left: 6.728874e-01	ci right 6.759099e-01	k: 249528	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
ACRC   370000 perm   136 sec   (2724 perm/sec)   p_kst 2.702703e-06   p_cons 6.744000e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.707530e-06	k: 0	n:380000
Cons ci ratio: 4.417859e-03	ci left: 6.729733e-01	ci right 6.759556e-01	k: 256297	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
ACRC   380000 perm   141 sec   (2702 perm/sec)   p_kst 2.631579e-06   p_cons 6.744658e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.458621e-06	k: 0	n:390000
Cons ci ratio: 4.068419e-03	ci left: 7.027443e-01	ci right 7.056117e-01	k: 274630	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
ACRC   390000 perm   146 sec   (2680 perm/sec)   p_kst 2.564103e-06   p_cons 7.041795e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.222156e-06	k: 0	n:400000
Cons ci ratio: 4.015935e-03	ci left: 7.028981e-01	ci right 7.057290e-01	k: 281726	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
ACRC   400000 perm   150 sec   (2659 perm/sec)   p_kst 2.500000e-06   p_cons 7.043150e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 8.997226e-06	k: 0	n:410000
Cons ci ratio: 3.966871e-03	ci left: 7.028931e-01	ci right 7.056894e-01	k: 288760	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
ACRC   410000 perm   156 sec   (2635 perm/sec)   p_kst 2.439024e-06   p_cons 7.042927e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.783008e-06	k: 0	n:420000
Cons ci ratio: 3.919942e-03	ci left: 7.028481e-01	ci right 7.056110e-01	k: 295777	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
ACRC   420000 perm   161 sec   (2614 perm/sec)   p_kst 2.380952e-06   p_cons 7.042310e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.578753e-06	k: 0	n:430000
Cons ci ratio: 3.873365e-03	ci left: 7.029428e-01	ci right 7.056731e-01	k: 302853	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
ACRC   430000 perm   166 sec   (2592 perm/sec)   p_kst 2.325581e-06   p_cons 7.043093e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.383782e-06	k: 0	n:440000
Cons ci ratio: 3.829412e-03	ci left: 7.029241e-01	ci right 7.056232e-01	k: 309881	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
ACRC   440000 perm   171 sec   (2571 perm/sec)   p_kst 2.272727e-06   p_cons 7.042750e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.197476e-06	k: 0	n:450000
Cons ci ratio: 3.786114e-03	ci left: 7.029954e-01	ci right 7.056642e-01	k: 316949	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
ACRC   450000 perm   176 sec   (2551 perm/sec)   p_kst 2.222222e-06   p_cons 7.043311e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.019271e-06	k: 0	n:460000
Cons ci ratio: 3.745913e-03	ci left: 7.028787e-01	ci right 7.055187e-01	k: 323932	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
ACRC   460000 perm   182 sec   (2530 perm/sec)   p_kst 2.173913e-06   p_cons 7.042000e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.848649e-06	k: 0	n:470000
Cons ci ratio: 3.705490e-03	ci left: 7.029334e-01	ci right 7.055450e-01	k: 330993	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
ACRC   470000 perm   187 sec   (2509 perm/sec)   p_kst 2.127660e-06   p_cons 7.042404e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.685136e-06	k: 0	n:480000
Cons ci ratio: 3.667447e-03	ci left: 7.028607e-01	ci right 7.054452e-01	k: 337994	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
ACRC   480000 perm   193 sec   (2488 perm/sec)   p_kst 2.083333e-06   p_cons 7.041542e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.528297e-06	k: 0	n:490000
Cons ci ratio: 3.630961e-03	ci left: 7.027441e-01	ci right 7.053024e-01	k: 344972	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
ACRC   490000 perm   199 sec   (2463 perm/sec)   p_kst 2.040816e-06   p_cons 7.040245e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.377732e-06	k: 0	n:500000
Cons ci ratio: 3.593610e-03	ci left: 7.028567e-01	ci right 7.053890e-01	k: 352062	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
ACRC   500000 perm   205 sec   (2435 perm/sec)   p_kst 2.000000e-06   p_cons 7.041240e-01   p_joint 0

Joint ci ratio: 4.328564e-01	ci left: 1.261307e-04	ci right 1.973993e-04	k: 81	n:510000
Cons ci ratio: 3.558543e-03	ci left: 7.028294e-01	ci right 7.053369e-01	k: 359083	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
ACRC   510000 perm   212 sec   (2403 perm/sec)   p_kst 1.960784e-06   p_cons 7.040843e-01   p_joint 1.588235e-04

Joint ci ratio: 5.238033e-01	ci left: 7.968082e-05	ci right 1.376710e-04	k: 55	n:520000
Cons ci ratio: 3.524824e-03	ci left: 7.027629e-01	ci right 7.052463e-01	k: 366083	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
ACRC   520000 perm   219 sec   (2372 perm/sec)   p_kst 1.923077e-06   p_cons 7.040058e-01   p_joint 1.057692e-04

Joint ci ratio: 5.103116e-01	ci left: 8.309881e-05	ci right 1.414665e-04	k: 58	n:530000
Cons ci ratio: 3.490687e-03	ci left: 7.028615e-01	ci right 7.053211e-01	k: 373169	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
ACRC   530000 perm   225 sec   (2353 perm/sec)   p_kst 1.886792e-06   p_cons 7.040925e-01   p_joint 1.094340e-04

Joint ci ratio: 5.018758e-01	ci left: 8.479052e-05	ci right 1.430197e-04	k: 60	n:540000
Cons ci ratio: 3.458014e-03	ci left: 7.028972e-01	ci right 7.053339e-01	k: 380223	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
ACRC   540000 perm   231 sec   (2334 perm/sec)   p_kst 1.851852e-06   p_cons 7.041167e-01   p_joint 1.111111e-04

Joint ci ratio: 4.938448e-01	ci left: 8.642841e-05	ci right 1.445090e-04	k: 62	n:550000
Cons ci ratio: 3.426406e-03	ci left: 7.029117e-01	ci right 7.053261e-01	k: 387266	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
ACRC   550000 perm   240 sec   (2287 perm/sec)   p_kst 1.818182e-06   p_cons 7.041200e-01   p_joint 1.127273e-04

Joint ci ratio: 5.060423e-01	ci left: 8.020368e-05	ci right 1.359010e-04	k: 59	n:560000
Cons ci ratio: 3.393830e-03	ci left: 7.031493e-01	ci right 7.055415e-01	k: 394434	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
ACRC   560000 perm   247 sec   (2269 perm/sec)   p_kst 1.785714e-06   p_cons 7.043464e-01   p_joint 1.053571e-04

Joint ci ratio: 4.788757e-01	ci left: 8.955267e-05	ci right 1.473103e-04	k: 66	n:570000
Cons ci ratio: 3.606398e-03	ci left: 6.733415e-01	ci right 6.757760e-01	k: 384499	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
ACRC   570000 perm   254 sec   (2243 perm/sec)   p_kst 1.754386e-06   p_cons 6.745596e-01   p_joint 1.157895e-04

Joint ci ratio: 4.718841e-01	ci left: 9.104363e-05	ci right 1.486291e-04	k: 68	n:580000
Cons ci ratio: 3.574522e-03	ci left: 6.734322e-01	ci right 6.758454e-01	k: 391291	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
ACRC   580000 perm   261 sec   (2223 perm/sec)   p_kst 1.724138e-06   p_cons 6.746397e-01   p_joint 1.172414e-04

Joint ci ratio: 4.718845e-01	ci left: 8.950050e-05	ci right 1.461100e-04	k: 68	n:590000
Cons ci ratio: 3.543886e-03	ci left: 6.734689e-01	ci right 6.758615e-01	k: 398053	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
ACRC   590000 perm   268 sec   (2205 perm/sec)   p_kst 1.694915e-06   p_cons 6.746661e-01   p_joint 1.152542e-04

Joint ci ratio: 4.788771e-01	ci left: 8.507498e-05	ci right 1.399449e-04	k: 66	n:600000
Cons ci ratio: 3.513545e-03	ci left: 6.735646e-01	ci right 6.759370e-01	k: 404851	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
ACRC   600000 perm   274 sec   (2188 perm/sec)   p_kst 1.666667e-06   p_cons 6.747517e-01   p_joint 1.100000e-04

Joint ci ratio: 4.824921e-01	ci left: 8.223967e-05	ci right 1.358141e-04	k: 65	n:610000
Cons ci ratio: 3.484412e-03	ci left: 6.736015e-01	ci right 6.759543e-01	k: 411615	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
ACRC   610000 perm   281 sec   (2170 perm/sec)   p_kst 1.639344e-06   p_cons 6.747787e-01   p_joint 1.065574e-04

Joint ci ratio: 4.899743e-01	ci left: 7.808300e-05	ci right 1.300052e-04	k: 63	n:620000
Cons ci ratio: 3.338331e-03	ci left: 6.886663e-01	ci right 6.909707e-01	k: 427688	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
ACRC   620000 perm   288 sec   (2154 perm/sec)   p_kst 1.612903e-06   p_cons 6.898194e-01   p_joint 1.016129e-04

Joint ci ratio: 4.899747e-01	ci left: 7.684357e-05	ci right 1.279417e-04	k: 63	n:630000
Cons ci ratio: 3.311991e-03	ci left: 6.886418e-01	ci right 6.909279e-01	k: 434565	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
ACRC   630000 perm   295 sec   (2136 perm/sec)   p_kst 1.587302e-06   p_cons 6.897857e-01   p_joint 1.000000e-04

Joint ci ratio: 4.899751e-01	ci left: 7.564288e-05	ci right 1.259426e-04	k: 63	n:640000
Cons ci ratio: 3.286517e-03	ci left: 6.885853e-01	ci right 6.908536e-01	k: 441421	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
ACRC   640000 perm   302 sec   (2121 perm/sec)   p_kst 1.562500e-06   p_cons 6.897203e-01   p_joint 9.843750e-05

Joint ci ratio: 5.285499e-01	ci left: 6.241054e-05	ci right 1.083960e-04	k: 54	n:650000
Cons ci ratio: 3.261246e-03	ci left: 6.885799e-01	ci right 6.908307e-01	k: 448309	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
ACRC   650000 perm   309 sec   (2106 perm/sec)   p_kst 1.538462e-06   p_cons 6.897062e-01   p_joint 8.307692e-05

Joint ci ratio: 5.238094e-01	ci left: 6.277867e-05	ci right 1.084684e-04	k: 55	n:660000
Cons ci ratio: 3.237099e-03	ci left: 6.885019e-01	ci right 6.907358e-01	k: 455149	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
ACRC   660000 perm   316 sec   (2087 perm/sec)   p_kst 1.515152e-06   p_cons 6.896197e-01   p_joint 8.333333e-05

Joint ci ratio: 5.146986e-01	ci left: 6.443531e-05	ci right 1.102227e-04	k: 57	n:670000
Cons ci ratio: 3.213290e-03	ci left: 6.884518e-01	ci right 6.906690e-01	k: 462006	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
ACRC   670000 perm   326 sec   (2053 perm/sec)   p_kst 1.492537e-06   p_cons 6.895612e-01   p_joint 8.507463e-05

Joint ci ratio: 5.103180e-01	ci left: 6.476802e-05	ci right 1.102610e-04	k: 58	n:680000
Cons ci ratio: 3.189308e-03	ci left: 6.884959e-01	ci right 6.906966e-01	k: 468926	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
ACRC   680000 perm   335 sec   (2033 perm/sec)   p_kst 1.470588e-06   p_cons 6.895971e-01   p_joint 8.529412e-05

Joint ci ratio: 5.103183e-01	ci left: 6.382934e-05	ci right 1.086631e-04	k: 58	n:690000
Cons ci ratio: 3.165898e-03	ci left: 6.885329e-01	ci right 6.907176e-01	k: 475842	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
ACRC   690000 perm   343 sec   (2011 perm/sec)   p_kst 1.449275e-06   p_cons 6.896261e-01   p_joint 8.405797e-05

Joint ci ratio: 5.285515e-01	ci left: 5.795260e-05	ci right 1.006535e-04	k: 54	n:700000
Cons ci ratio: 3.143269e-03	ci left: 6.885318e-01	ci right 6.907009e-01	k: 482732	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
ACRC   700000 perm   351 sec   (1996 perm/sec)   p_kst 1.428571e-06   p_cons 6.896171e-01   p_joint 7.714286e-05

Joint ci ratio: 5.146998e-01	ci left: 6.080512e-05	ci right 1.040130e-04	k: 57	n:710000
Cons ci ratio: 3.120810e-03	ci left: 6.885731e-01	ci right 6.907267e-01	k: 489652	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
ACRC   710000 perm   359 sec   (1978 perm/sec)   p_kst 1.408451e-06   p_cons 6.896507e-01   p_joint 8.028169e-05

Joint ci ratio: 5.147001e-01	ci left: 5.996059e-05	ci right 1.025684e-04	k: 57	n:720000
Cons ci ratio: 3.099560e-03	ci left: 6.885118e-01	ci right 6.906506e-01	k: 496499	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
ACRC   720000 perm   366 sec   (1966 perm/sec)   p_kst 1.388889e-06   p_cons 6.895819e-01   p_joint 7.916667e-05

Joint ci ratio: 5.060487e-01	ci left: 6.152594e-05	ci right 1.042532e-04	k: 59	n:730000
Cons ci ratio: 3.078255e-03	ci left: 6.885194e-01	ci right 6.906435e-01	k: 503395	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
ACRC   730000 perm   374 sec   (1954 perm/sec)   p_kst 1.369863e-06   p_cons 6.895822e-01   p_joint 8.082192e-05

Joint ci ratio: 5.060490e-01	ci left: 6.069450e-05	ci right 1.028444e-04	k: 59	n:740000
Cons ci ratio: 3.057499e-03	ci left: 6.885106e-01	ci right 6.906203e-01	k: 510279	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
ACRC   740000 perm   381 sec   (1942 perm/sec)   p_kst 1.351351e-06   p_cons 6.895662e-01   p_joint 7.972973e-05

Joint ci ratio: 4.938525e-01	ci left: 6.338063e-05	ci right 1.059737e-04	k: 62	n:750000
Cons ci ratio: 3.037101e-03	ci left: 6.885102e-01	ci right 6.906057e-01	k: 517169	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
ACRC   750000 perm   389 sec   (1930 perm/sec)   p_kst 1.333333e-06   p_cons 6.895587e-01   p_joint 8.266667e-05

Joint ci ratio: 4.899790e-01	ci left: 6.369916e-05	ci right 1.060571e-04	k: 63	n:760000
Cons ci ratio: 3.017069e-03	ci left: 6.885150e-01	ci right 6.905967e-01	k: 524063	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
ACRC   760000 perm   396 sec   (1918 perm/sec)   p_kst 1.315789e-06   p_cons 6.895566e-01   p_joint 8.289474e-05

Joint ci ratio: 4.861953e-01	ci left: 6.401070e-05	ci right 1.061372e-04	k: 64	n:770000
Cons ci ratio: 2.997500e-03	ci left: 6.885094e-01	ci right 6.905775e-01	k: 530949	n:770000
KS ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
ACRC   770000 perm   404 sec   (1905 perm/sec)   p_kst 1.298701e-06   p_cons 6.895442e-01   p_joint 8.311688e-05

Joint ci ratio: 4.824979e-01	ci left: 6.431548e-05	ci right 1.062140e-04	k: 65	n:780000
Cons ci ratio: 2.977675e-03	ci left: 6.885950e-01	ci right 6.906497e-01	k: 537906	n:780000
KS ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
ACRC   780000 perm   412 sec   (1894 perm/sec)   p_kst 1.282051e-06   p_cons 6.896231e-01   p_joint 8.333333e-05

Joint ci ratio: 4.824982e-01	ci left: 6.350135e-05	ci right 1.048695e-04	k: 65	n:790000
Cons ci ratio: 2.958569e-03	ci left: 6.886304e-01	ci right 6.906720e-01	k: 544825	n:790000
KS ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
ACRC   790000 perm   420 sec   (1881 perm/sec)   p_kst 1.265823e-06   p_cons 6.896519e-01   p_joint 8.227848e-05

Joint ci ratio: 4.824984e-01	ci left: 6.270758e-05	ci right 1.035586e-04	k: 65	n:800000
Cons ci ratio: 2.940411e-03	ci left: 6.885799e-01	ci right 6.906088e-01	k: 551676	n:800000
KS ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
ACRC   800000 perm   428 sec   (1869 perm/sec)   p_kst 1.250000e-06   p_cons 6.895950e-01   p_joint 8.125000e-05

Joint ci ratio: 5.334263e-01	ci left: 4.901350e-05	ci right 8.558593e-05	k: 53	n:810000
Cons ci ratio: 2.922499e-03	ci left: 6.885430e-01	ci right 6.905594e-01	k: 558537	n:810000
KS ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
ACRC   810000 perm   436 sec   (1858 perm/sec)   p_kst 1.234568e-06   p_cons 6.895519e-01   p_joint 6.543210e-05

Joint ci ratio: 5.285546e-01	ci left: 4.947167e-05	ci right 8.592388e-05	k: 54	n:820000
Cons ci ratio: 2.904868e-03	ci left: 6.885131e-01	ci right 6.905173e-01	k: 565403	n:820000
KS ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
ACRC   820000 perm   444 sec   (1846 perm/sec)   p_kst 1.219512e-06   p_cons 6.895159e-01   p_joint 6.585366e-05

Joint ci ratio: 5.285549e-01	ci left: 4.887562e-05	ci right 8.488866e-05	k: 54	n:830000
Cons ci ratio: 2.887463e-03	ci left: 6.884973e-01	ci right 6.904893e-01	k: 572280	n:830000
KS ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
ACRC   830000 perm   453 sec   (1834 perm/sec)   p_kst 1.204819e-06   p_cons 6.894940e-01   p_joint 6.506024e-05

Joint ci ratio: 5.285551e-01	ci left: 4.829376e-05	ci right 8.387809e-05	k: 54	n:840000
Cons ci ratio: 2.870136e-03	ci left: 6.885164e-01	ci right 6.904966e-01	k: 579186	n:840000
KS ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
ACRC   840000 perm   461 sec   (1823 perm/sec)   p_kst 1.190476e-06   p_cons 6.895071e-01   p_joint 6.428571e-05

Joint ci ratio: 5.285553e-01	ci left: 4.772560e-05	ci right 8.289130e-05	k: 54	n:850000
Cons ci ratio: 2.853486e-03	ci left: 6.884798e-01	ci right 6.904483e-01	k: 586045	n:850000
KS ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
ACRC   850000 perm   469 sec   (1812 perm/sec)   p_kst 1.176471e-06   p_cons 6.894647e-01   p_joint 6.352941e-05

Joint ci ratio: 5.285555e-01	ci left: 4.717065e-05	ci right 8.192746e-05	k: 54	n:860000
Cons ci ratio: 2.836837e-03	ci left: 6.884871e-01	ci right 6.904442e-01	k: 592941	n:860000
KS ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
ACRC   860000 perm   477 sec   (1801 perm/sec)   p_kst 1.162791e-06   p_cons 6.894663e-01   p_joint 6.279070e-05

Joint ci ratio: 5.488934e-01	ci left: 4.265657e-05	ci right 7.576800e-05	k: 50	n:870000
Cons ci ratio: 2.820370e-03	ci left: 6.885104e-01	ci right 6.904561e-01	k: 599851	n:870000
KS ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
ACRC   870000 perm   486 sec   (1791 perm/sec)   p_kst 1.149425e-06   p_cons 6.894839e-01   p_joint 5.747126e-05

Joint ci ratio: 5.488936e-01	ci left: 4.217183e-05	ci right 7.490701e-05	k: 50	n:880000
Cons ci ratio: 2.803978e-03	ci left: 6.885651e-01	ci right 6.904996e-01	k: 606789	n:880000
KS ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
ACRC   880000 perm   494 sec   (1780 perm/sec)   p_kst 1.136364e-06   p_cons 6.895330e-01   p_joint 5.681818e-05

Joint ci ratio: 5.384371e-01	ci left: 4.363635e-05	ci right 7.661850e-05	k: 52	n:890000
Cons ci ratio: 2.788491e-03	ci left: 6.885229e-01	ci right 6.904466e-01	k: 613642	n:890000
KS ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
ACRC   890000 perm   503 sec   (1769 perm/sec)   p_kst 1.123596e-06   p_cons 6.894854e-01   p_joint 5.842697e-05

Joint ci ratio: 5.384373e-01	ci left: 4.315150e-05	ci right 7.576719e-05	k: 52	n:900000
Cons ci ratio: 2.773581e-03	ci left: 6.884317e-01	ci right 6.903449e-01	k: 620450	n:900000
KS ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
ACRC   900000 perm   512 sec   (1759 perm/sec)   p_kst 1.111111e-06   p_cons 6.893889e-01   p_joint 5.777778e-05

Joint ci ratio: 5.488941e-01	ci left: 4.078155e-05	ci right 7.243757e-05	k: 50	n:910000
Cons ci ratio: 2.758915e-03	ci left: 6.883414e-01	ci right 6.902442e-01	k: 627257	n:910000
KS ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
ACRC   910000 perm   520 sec   (1749 perm/sec)   p_kst 1.098901e-06   p_cons 6.892934e-01   p_joint 5.494505e-05

Joint ci ratio: 5.488943e-01	ci left: 4.033826e-05	ci right 7.165021e-05	k: 50	n:920000
Cons ci ratio: 2.744561e-03	ci left: 6.882401e-01	ci right 6.901326e-01	k: 634052	n:920000
KS ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
ACRC   920000 perm   529 sec   (1739 perm/sec)   p_kst 1.086957e-06   p_cons 6.891870e-01   p_joint 5.434783e-05

Joint ci ratio: 5.488944e-01	ci left: 3.990452e-05	ci right 7.087979e-05	k: 50	n:930000
Cons ci ratio: 2.729827e-03	ci left: 6.882356e-01	ci right 6.901180e-01	k: 640935	n:930000
KS ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
ACRC   930000 perm   538 sec   (1728 perm/sec)   p_kst 1.075269e-06   p_cons 6.891774e-01   p_joint 5.376344e-05

Joint ci ratio: 6.823721e-01	ci left: 2.328519e-05	ci right 4.805759e-05	k: 32	n:940000
Cons ci ratio: 2.714929e-03	ci left: 6.882941e-01	ci right 6.901664e-01	k: 647877	n:940000
KS ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
ACRC   940000 perm   547 sec   (1718 perm/sec)   p_kst 1.063830e-06   p_cons 6.892309e-01   p_joint 3.404255e-05

Joint ci ratio: 6.823722e-01	ci left: 2.304009e-05	ci right 4.755173e-05	k: 32	n:950000
Cons ci ratio: 2.700796e-03	ci left: 6.882682e-01	ci right 6.901306e-01	k: 654740	n:950000
KS ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
ACRC   950000 perm   556 sec   (1709 perm/sec)   p_kst 1.052632e-06   p_cons 6.892000e-01   p_joint 3.368421e-05

Joint ci ratio: 6.722622e-01	ci left: 2.366228e-05	ci right 4.827494e-05	k: 33	n:960000
Cons ci ratio: 2.686941e-03	ci left: 6.882335e-01	ci right 6.900862e-01	k: 661594	n:960000
KS ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
ACRC   960000 perm   565 sec   (1699 perm/sec)   p_kst 1.041667e-06   p_cons 6.891604e-01   p_joint 3.437500e-05

Joint ci ratio: 6.722623e-01	ci left: 2.341834e-05	ci right 4.777727e-05	k: 33	n:970000
Cons ci ratio: 2.672564e-03	ci left: 6.883171e-01	ci right 6.901601e-01	k: 668562	n:970000
KS ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
ACRC   970000 perm   575 sec   (1688 perm/sec)   p_kst 1.030928e-06   p_cons 6.892392e-01   p_joint 3.402062e-05

Joint ci ratio: 6.722624e-01	ci left: 2.317938e-05	ci right 4.728975e-05	k: 33	n:980000
Cons ci ratio: 2.659155e-03	ci left: 6.882795e-01	ci right 6.901132e-01	k: 675413	n:980000
KS ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
ACRC   980000 perm   584 sec   (1678 perm/sec)   p_kst 1.020408e-06   p_cons 6.891969e-01   p_joint 3.367347e-05

Joint ci ratio: 6.722626e-01	ci left: 2.294524e-05	ci right 4.681208e-05	k: 33	n:990000
Cons ci ratio: 2.645978e-03	ci left: 6.882377e-01	ci right 6.900622e-01	k: 682259	n:990000
KS ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
ACRC   990000 perm   593 sec   (1669 perm/sec)   p_kst 1.010101e-06   p_cons 6.891505e-01   p_joint 3.333333e-05

Joint ci ratio: 6.533212e-01	ci left: 2.437890e-05	ci right 4.867619e-05	k: 35	n:1000000
Cons ci ratio: 2.632564e-03	ci left: 6.882668e-01	ci right 6.900821e-01	k: 689175	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
ACRC   1000000 perm   603 sec   (1660 perm/sec)   p_kst 1.000000e-06   p_cons 6.891750e-01   p_joint 3.500000e-05

Joint ci ratio: 6.444319e-01	ci left: 2.496444e-05	ci right 4.934538e-05	k: 36	n:1010000
Cons ci ratio: 2.619256e-03	ci left: 6.883112e-01	ci right 6.901174e-01	k: 696107	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
ACRC   1010000 perm   612 sec   (1651 perm/sec)   p_kst 9.900990e-07   p_cons 6.892149e-01   p_joint 3.564356e-05

Joint ci ratio: 6.444320e-01	ci left: 2.471968e-05	ci right 4.886160e-05	k: 36	n:1020000
Cons ci ratio: 2.606159e-03	ci left: 6.883528e-01	ci right 6.901500e-01	k: 703037	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
ACRC   1020000 perm   621 sec   (1642 perm/sec)   p_kst 9.803922e-07   p_cons 6.892520e-01   p_joint 3.529412e-05

Joint ci ratio: 6.722630e-01	ci left: 2.205416e-05	ci right 4.499414e-05	k: 33	n:1030000
Cons ci ratio: 2.593327e-03	ci left: 6.883819e-01	ci right 6.901704e-01	k: 709955	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
ACRC   1030000 perm   631 sec   (1633 perm/sec)   p_kst 9.708738e-07   p_cons 6.892767e-01   p_joint 3.203883e-05

Joint ci ratio: 6.625895e-01	ci left: 2.264048e-05	ci right 4.568393e-05	k: 34	n:1040000
Cons ci ratio: 2.580550e-03	ci left: 6.884327e-01	ci right 6.902124e-01	k: 716896	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
ACRC   1040000 perm   640 sec   (1624 perm/sec)   p_kst 9.615385e-07   p_cons 6.893231e-01   p_joint 3.269231e-05

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.513212e-06	k: 0	n:1050000
Cons ci ratio: 2.567942e-03	ci left: 6.884853e-01	ci right 6.902565e-01	k: 723840	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
ACRC   1050000 perm   650 sec   (1615 perm/sec)   p_kst 9.523810e-07   p_cons 6.893714e-01   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.480069e-06	k: 0	n:1060000
Cons ci ratio: 2.555664e-03	ci left: 6.885124e-01	ci right 6.902752e-01	k: 730758	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
ACRC   1060000 perm   660 sec   (1607 perm/sec)   p_kst 9.433962e-07   p_cons 6.893943e-01   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.447545e-06	k: 0	n:1070000
Cons ci ratio: 2.543288e-03	ci left: 6.885849e-01	ci right 6.903393e-01	k: 737725	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
ACRC   1070000 perm   669 sec   (1598 perm/sec)   p_kst 9.345794e-07   p_cons 6.894626e-01   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.415623e-06	k: 0	n:1080000
Cons ci ratio: 2.531801e-03	ci left: 6.885356e-01	ci right 6.902819e-01	k: 744562	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
ACRC   1080000 perm   679 sec   (1590 perm/sec)   p_kst 9.259259e-07   p_cons 6.894093e-01   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.384287e-06	k: 0	n:1090000
Cons ci ratio: 2.520410e-03	ci left: 6.884973e-01	ci right 6.902357e-01	k: 751410	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
ACRC   1090000 perm   689 sec   (1581 perm/sec)   p_kst 9.174312e-07   p_cons 6.893670e-01   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.353521e-06	k: 0	n:1100000
Cons ci ratio: 2.508542e-03	ci left: 6.885671e-01	ci right 6.902974e-01	k: 758376	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
ACRC   1100000 perm   699 sec   (1573 perm/sec)   p_kst 9.090909e-07   p_cons 6.894327e-01   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.323309e-06	k: 0	n:1110000
Cons ci ratio: 2.496987e-03	ci left: 6.886103e-01	ci right 6.903328e-01	k: 765314	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
ACRC   1110000 perm   710 sec   (1564 perm/sec)   p_kst 9.009009e-07   p_cons 6.894721e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.293637e-06	k: 0	n:1120000
Cons ci ratio: 2.486119e-03	ci left: 6.885617e-01	ci right 6.902766e-01	k: 772150	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
ACRC   1120000 perm   720 sec   (1555 perm/sec)   p_kst 8.928571e-07   p_cons 6.894196e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.264490e-06	k: 0	n:1130000
Cons ci ratio: 2.475254e-03	ci left: 6.885379e-01	ci right 6.902452e-01	k: 779013	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
ACRC   1130000 perm   730 sec   (1547 perm/sec)   p_kst 8.849558e-07   p_cons 6.893920e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.235854e-06	k: 0	n:1140000
Cons ci ratio: 2.464323e-03	ci left: 6.885505e-01	ci right 6.902503e-01	k: 785917	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
ACRC   1140000 perm   741 sec   (1539 perm/sec)   p_kst 8.771930e-07   p_cons 6.894009e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.207716e-06	k: 0	n:1150000
Cons ci ratio: 2.453909e-03	ci left: 6.884977e-01	ci right 6.901901e-01	k: 792746	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
ACRC   1150000 perm   751 sec   (1531 perm/sec)   p_kst 8.695652e-07   p_cons 6.893443e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.180063e-06	k: 0	n:1160000
Cons ci ratio: 2.442834e-03	ci left: 6.885846e-01	ci right 6.902696e-01	k: 799736	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
ACRC   1160000 perm   762 sec   (1523 perm/sec)   p_kst 8.620690e-07   p_cons 6.894276e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.152883e-06	k: 0	n:1170000
Cons ci ratio: 2.267403e-03	ci left: 7.178612e-01	ci right 7.194916e-01	k: 840852	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
ACRC   1170000 perm   772 sec   (1515 perm/sec)   p_kst 8.547009e-07   p_cons 7.186769e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.126164e-06	k: 0	n:1180000
Cons ci ratio: 2.257699e-03	ci left: 7.178784e-01	ci right 7.195018e-01	k: 848055	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
ACRC   1180000 perm   783 sec   (1507 perm/sec)   p_kst 8.474576e-07   p_cons 7.186907e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.099894e-06	k: 0	n:1190000
Cons ci ratio: 2.247977e-03	ci left: 7.179206e-01	ci right 7.195371e-01	k: 855288	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
ACRC   1190000 perm   794 sec   (1499 perm/sec)   p_kst 8.403361e-07   p_cons 7.187294e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.074061e-06	k: 0	n:1200000
Cons ci ratio: 2.238777e-03	ci left: 7.178904e-01	ci right 7.195002e-01	k: 862435	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
ACRC   1200000 perm   805 sec   (1491 perm/sec)   p_kst 8.333333e-07   p_cons 7.186958e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.048656e-06	k: 0	n:1210000
Cons ci ratio: 2.229803e-03	ci left: 7.178400e-01	ci right 7.194432e-01	k: 869557	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
ACRC   1210000 perm   816 sec   (1483 perm/sec)   p_kst 8.264463e-07   p_cons 7.186421e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.023667e-06	k: 0	n:1220000
Cons ci ratio: 2.220890e-03	ci left: 7.177987e-01	ci right 7.193954e-01	k: 876689	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
ACRC   1220000 perm   827 sec   (1475 perm/sec)   p_kst 8.196721e-07   p_cons 7.185975e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.999084e-06	k: 0	n:1230000
Cons ci ratio: 2.211510e-03	ci left: 7.178630e-01	ci right 7.194531e-01	k: 883950	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
ACRC   1230000 perm   838 sec   (1467 perm/sec)   p_kst 8.130081e-07   p_cons 7.186585e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.974898e-06	k: 0	n:1240000
Cons ci ratio: 2.202529e-03	ci left: 7.178746e-01	ci right 7.194583e-01	k: 891147	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
ACRC   1240000 perm   850 sec   (1460 perm/sec)   p_kst 8.064516e-07   p_cons 7.186669e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.951099e-06	k: 0	n:1250000
Cons ci ratio: 2.194238e-03	ci left: 7.177788e-01	ci right 7.193562e-01	k: 898210	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
ACRC   1250000 perm   861 sec   (1452 perm/sec)   p_kst 8.000000e-07   p_cons 7.185680e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.927678e-06	k: 0	n:1260000
Cons ci ratio: 2.185559e-03	ci left: 7.177734e-01	ci right 7.193446e-01	k: 905385	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
ACRC   1260000 perm   872 sec   (1445 perm/sec)   p_kst 7.936508e-07   p_cons 7.185595e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.904625e-06	k: 0	n:1270000
Cons ci ratio: 2.176889e-03	ci left: 7.177855e-01	ci right 7.193505e-01	k: 912582	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
ACRC   1270000 perm   884 sec   (1437 perm/sec)   p_kst 7.874016e-07   p_cons 7.185685e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.881933e-06	k: 0	n:1280000
Cons ci ratio: 2.168594e-03	ci left: 7.177466e-01	ci right 7.193055e-01	k: 919714	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
ACRC   1280000 perm   895 sec   (1430 perm/sec)   p_kst 7.812500e-07   p_cons 7.185266e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.859592e-06	k: 0	n:1290000
Cons ci ratio: 2.160314e-03	ci left: 7.177230e-01	ci right 7.192760e-01	k: 926865	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
ACRC   1290000 perm   907 sec   (1422 perm/sec)   p_kst 7.751938e-07   p_cons 7.185000e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.837596e-06	k: 0	n:1300000
Cons ci ratio: 2.152075e-03	ci left: 7.177099e-01	ci right 7.192568e-01	k: 934029	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
ACRC   1300000 perm   919 sec   (1415 perm/sec)   p_kst 7.692308e-07   p_cons 7.184838e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.815935e-06	k: 0	n:1310000
Cons ci ratio: 2.143816e-03	ci left: 7.177183e-01	ci right 7.192594e-01	k: 941221	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
ACRC   1310000 perm   930 sec   (1408 perm/sec)   p_kst 7.633588e-07   p_cons 7.184893e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.794602e-06	k: 0	n:1320000
Cons ci ratio: 2.136024e-03	ci left: 7.176561e-01	ci right 7.191914e-01	k: 948320	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
ACRC   1320000 perm   942 sec   (1401 perm/sec)   p_kst 7.575758e-07   p_cons 7.184242e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.773590e-06	k: 0	n:1330000
Cons ci ratio: 2.128015e-03	ci left: 7.176521e-01	ci right 7.191816e-01	k: 955495	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
ACRC   1330000 perm   954 sec   (1394 perm/sec)   p_kst 7.518797e-07   p_cons 7.184173e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.752891e-06	k: 0	n:1340000
Cons ci ratio: 2.119869e-03	ci left: 7.176914e-01	ci right 7.192151e-01	k: 962728	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
ACRC   1340000 perm   966 sec   (1387 perm/sec)   p_kst 7.462687e-07   p_cons 7.184537e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.732500e-06	k: 0	n:1350000
Cons ci ratio: 2.111684e-03	ci left: 7.177554e-01	ci right 7.192733e-01	k: 969995	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
ACRC   1350000 perm   978 sec   (1380 perm/sec)   p_kst 7.407407e-07   p_cons 7.185148e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.712408e-06	k: 0	n:1360000
Cons ci ratio: 2.103846e-03	ci left: 7.177698e-01	ci right 7.192822e-01	k: 977196	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
ACRC   1360000 perm   990 sec   (1373 perm/sec)   p_kst 7.352941e-07   p_cons 7.185265e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.692609e-06	k: 0	n:1370000
Cons ci ratio: 2.096158e-03	ci left: 7.177717e-01	ci right 7.192785e-01	k: 984380	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
ACRC   1370000 perm   1003 sec   (1366 perm/sec)   p_kst 7.299270e-07   p_cons 7.185255e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.673097e-06	k: 0	n:1380000
Cons ci ratio: 2.088262e-03	ci left: 7.178301e-01	ci right 7.193313e-01	k: 991642	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
ACRC   1380000 perm   1015 sec   (1359 perm/sec)   p_kst 7.246377e-07   p_cons 7.185812e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.653867e-06	k: 0	n:1390000
Cons ci ratio: 2.080740e-03	ci left: 7.178322e-01	ci right 7.193281e-01	k: 998827	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
ACRC   1390000 perm   1028 sec   (1352 perm/sec)   p_kst 7.194245e-07   p_cons 7.185806e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.634910e-06	k: 0	n:1400000
Cons ci ratio: 2.073342e-03	ci left: 7.178257e-01	ci right 7.193162e-01	k: 1006000	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
ACRC   1400000 perm   1040 sec   (1346 perm/sec)   p_kst 7.142857e-07   p_cons 7.185714e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.616223e-06	k: 0	n:1410000
Cons ci ratio: 2.066049e-03	ci left: 7.178144e-01	ci right 7.192996e-01	k: 1013166	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
ACRC   1410000 perm   1053 sec   (1340 perm/sec)   p_kst 7.092199e-07   p_cons 7.185574e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.597799e-06	k: 0	n:1420000
Cons ci ratio: 2.058799e-03	ci left: 7.178095e-01	ci right 7.192896e-01	k: 1020341	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
ACRC   1420000 perm   1065 sec   (1334 perm/sec)   p_kst 7.042254e-07   p_cons 7.185500e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.579633e-06	k: 0	n:1430000
Cons ci ratio: 2.051611e-03	ci left: 7.178076e-01	ci right 7.192824e-01	k: 1027520	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
ACRC   1430000 perm   1077 sec   (1327 perm/sec)   p_kst 6.993007e-07   p_cons 7.185455e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.561719e-06	k: 0	n:1440000
Cons ci ratio: 2.044065e-03	ci left: 7.178912e-01	ci right 7.193607e-01	k: 1034822	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
ACRC   1440000 perm   1090 sec   (1321 perm/sec)   p_kst 6.944444e-07   p_cons 7.186264e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.544052e-06	k: 0	n:1450000
Cons ci ratio: 2.036988e-03	ci left: 7.178970e-01	ci right 7.193615e-01	k: 1042013	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
ACRC   1450000 perm   1102 sec   (1315 perm/sec)   p_kst 6.896552e-07   p_cons 7.186297e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.526627e-06	k: 0	n:1460000
Cons ci ratio: 2.030270e-03	ci left: 7.178458e-01	ci right 7.193054e-01	k: 1049121	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
ACRC   1460000 perm   1115 sec   (1309 perm/sec)   p_kst 6.849315e-07   p_cons 7.185760e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.509439e-06	k: 0	n:1470000
Cons ci ratio: 2.023464e-03	ci left: 7.178260e-01	ci right 7.192806e-01	k: 1056274	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
ACRC   1470000 perm   1128 sec   (1304 perm/sec)   p_kst 6.802721e-07   p_cons 7.185537e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.492483e-06	k: 0	n:1480000
Cons ci ratio: 2.016658e-03	ci left: 7.178200e-01	ci right 7.192697e-01	k: 1063447	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
ACRC   1480000 perm   1141 sec   (1297 perm/sec)   p_kst 6.756757e-07   p_cons 7.185453e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.475755e-06	k: 0	n:1490000
Cons ci ratio: 2.009988e-03	ci left: 7.178006e-01	ci right 7.192455e-01	k: 1070600	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
ACRC   1490000 perm   1154 sec   (1291 perm/sec)   p_kst 6.711409e-07   p_cons 7.185235e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.459250e-06	k: 0	n:1500000
Cons ci ratio: 2.003106e-03	ci left: 7.178376e-01	ci right 7.192776e-01	k: 1077837	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
ACRC   1500000 perm   1167 sec   (1285 perm/sec)   p_kst 6.666667e-07   p_cons 7.185580e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.442964e-06	k: 0	n:1510000
Cons ci ratio: 1.996454e-03	ci left: 7.178416e-01	ci right 7.192768e-01	k: 1085025	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
ACRC   1510000 perm   1180 sec   (1279 perm/sec)   p_kst 6.622517e-07   p_cons 7.185596e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.426891e-06	k: 0	n:1520000
Cons ci ratio: 1.989713e-03	ci left: 7.178771e-01	ci right 7.193076e-01	k: 1092261	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
ACRC   1520000 perm   1194 sec   (1273 perm/sec)   p_kst 6.578947e-07   p_cons 7.185928e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.411029e-06	k: 0	n:1530000
Cons ci ratio: 1.982892e-03	ci left: 7.179423e-01	ci right 7.193680e-01	k: 1099543	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
ACRC   1530000 perm   1208 sec   (1267 perm/sec)   p_kst 6.535948e-07   p_cons 7.186556e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.395373e-06	k: 0	n:1540000
Cons ci ratio: 1.976442e-03	ci left: 7.179449e-01	ci right 7.193659e-01	k: 1106730	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
ACRC   1540000 perm   1222 sec   (1261 perm/sec)   p_kst 6.493506e-07   p_cons 7.186558e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.379919e-06	k: 0	n:1550000
Cons ci ratio: 1.969989e-03	ci left: 7.179611e-01	ci right 7.193775e-01	k: 1113938	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
ACRC   1550000 perm   1236 sec   (1254 perm/sec)   p_kst 6.451613e-07   p_cons 7.186697e-01   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.364664e-06	k: 0	n:1560000
Cons ci ratio: 1.963828e-03	ci left: 7.179295e-01	ci right 7.193414e-01	k: 1121072	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
ACRC   1560000 perm   1250 sec   (1248 perm/sec)   p_kst 6.410256e-07   p_cons 7.186359e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.349602e-06	k: 0	n:1570000
Cons ci ratio: 1.957519e-03	ci left: 7.179411e-01	ci right 7.193485e-01	k: 1128273	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
ACRC   1570000 perm   1263 sec   (1243 perm/sec)   p_kst 6.369427e-07   p_cons 7.186452e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.334731e-06	k: 0	n:1580000
Cons ci ratio: 1.951108e-03	ci left: 7.179862e-01	ci right 7.193890e-01	k: 1135527	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
ACRC   1580000 perm   1276 sec   (1238 perm/sec)   p_kst 6.329114e-07   p_cons 7.186880e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.320047e-06	k: 0	n:1590000
Cons ci ratio: 1.944881e-03	ci left: 7.180054e-01	ci right 7.194038e-01	k: 1142741	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
ACRC   1590000 perm   1290 sec   (1233 perm/sec)   p_kst 6.289308e-07   p_cons 7.187050e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.305547e-06	k: 0	n:1600000
Cons ci ratio: 1.938578e-03	ci left: 7.180526e-01	ci right 7.194466e-01	k: 1150000	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
ACRC   1600000 perm   1303 sec   (1228 perm/sec)   p_kst 6.250000e-07   p_cons 7.187500e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.291227e-06	k: 0	n:1610000
Cons ci ratio: 1.932366e-03	ci left: 7.180930e-01	ci right 7.194826e-01	k: 1157249	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
ACRC   1610000 perm   1317 sec   (1223 perm/sec)   p_kst 6.211180e-07   p_cons 7.187882e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.277083e-06	k: 0	n:1620000
Cons ci ratio: 1.926386e-03	ci left: 7.180965e-01	ci right 7.194817e-01	k: 1164439	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
ACRC   1620000 perm   1330 sec   (1218 perm/sec)   p_kst 6.172840e-07   p_cons 7.187895e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.263114e-06	k: 0	n:1630000
Cons ci ratio: 1.920348e-03	ci left: 7.181239e-01	ci right 7.195048e-01	k: 1171668	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
ACRC   1630000 perm   1344 sec   (1213 perm/sec)   p_kst 6.134969e-07   p_cons 7.188147e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.249314e-06	k: 0	n:1640000
Cons ci ratio: 1.914797e-03	ci left: 7.180600e-01	ci right 7.194368e-01	k: 1178748	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
ACRC   1640000 perm   1358 sec   (1208 perm/sec)   p_kst 6.097561e-07   p_cons 7.187488e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.235682e-06	k: 0	n:1650000
Cons ci ratio: 1.909001e-03	ci left: 7.180587e-01	ci right 7.194314e-01	k: 1185930	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
ACRC   1650000 perm   1371 sec   (1203 perm/sec)   p_kst 6.060606e-07   p_cons 7.187455e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.222214e-06	k: 0	n:1660000
Cons ci ratio: 1.903218e-03	ci left: 7.180660e-01	ci right 7.194345e-01	k: 1193126	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
ACRC   1660000 perm   1386 sec   (1198 perm/sec)   p_kst 6.024096e-07   p_cons 7.187506e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.208907e-06	k: 0	n:1670000
Cons ci ratio: 1.897347e-03	ci left: 7.181031e-01	ci right 7.194674e-01	k: 1200372	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
ACRC   1670000 perm   1400 sec   (1193 perm/sec)   p_kst 5.988024e-07   p_cons 7.187856e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.195759e-06	k: 0	n:1680000
Cons ci ratio: 1.891686e-03	ci left: 7.181064e-01	ci right 7.194667e-01	k: 1207562	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
ACRC   1680000 perm   1414 sec   (1188 perm/sec)   p_kst 5.952381e-07   p_cons 7.187869e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.182767e-06	k: 0	n:1690000
Cons ci ratio: 1.886003e-03	ci left: 7.181251e-01	ci right 7.194813e-01	k: 1214778	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
ACRC   1690000 perm   1429 sec   (1183 perm/sec)   p_kst 5.917160e-07   p_cons 7.188036e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.169927e-06	k: 0	n:1700000
Cons ci ratio: 1.880609e-03	ci left: 7.180923e-01	ci right 7.194446e-01	k: 1221907	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
ACRC   1700000 perm   1443 sec   (1178 perm/sec)   p_kst 5.882353e-07   p_cons 7.187688e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.157237e-06	k: 0	n:1710000
Cons ci ratio: 1.875245e-03	ci left: 7.180635e-01	ci right 7.194118e-01	k: 1229042	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
ACRC   1710000 perm   1457 sec   (1173 perm/sec)   p_kst 5.847953e-07   p_cons 7.187380e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.144695e-06	k: 0	n:1720000
Cons ci ratio: 1.869860e-03	ci left: 7.180495e-01	ci right 7.193940e-01	k: 1236202	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
ACRC   1720000 perm   1472 sec   (1169 perm/sec)   p_kst 5.813953e-07   p_cons 7.187221e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.132298e-06	k: 0	n:1730000
Cons ci ratio: 1.864507e-03	ci left: 7.180386e-01	ci right 7.193792e-01	k: 1243367	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
ACRC   1730000 perm   1486 sec   (1164 perm/sec)   p_kst 5.780347e-07   p_cons 7.187092e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.120043e-06	k: 0	n:1740000
Cons ci ratio: 1.859065e-03	ci left: 7.180571e-01	ci right 7.193939e-01	k: 1250583	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
ACRC   1740000 perm   1501 sec   (1159 perm/sec)   p_kst 5.747126e-07   p_cons 7.187259e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.107929e-06	k: 0	n:1750000
Cons ci ratio: 1.853927e-03	ci left: 7.180195e-01	ci right 7.193524e-01	k: 1257701	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
ACRC   1750000 perm   1516 sec   (1155 perm/sec)   p_kst 5.714286e-07   p_cons 7.186863e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.095952e-06	k: 0	n:1760000
Cons ci ratio: 1.848570e-03	ci left: 7.180396e-01	ci right 7.193687e-01	k: 1264920	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
ACRC   1760000 perm   1530 sec   (1150 perm/sec)   p_kst 5.681818e-07   p_cons 7.187045e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.084111e-06	k: 0	n:1770000
Cons ci ratio: 1.843418e-03	ci left: 7.180245e-01	ci right 7.193499e-01	k: 1272077	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
ACRC   1770000 perm   1545 sec   (1145 perm/sec)   p_kst 5.649718e-07   p_cons 7.186876e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.072402e-06	k: 0	n:1780000
Cons ci ratio: 1.838219e-03	ci left: 7.180293e-01	ci right 7.193509e-01	k: 1279269	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
ACRC   1780000 perm   1560 sec   (1141 perm/sec)   p_kst 5.617978e-07   p_cons 7.186904e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.060824e-06	k: 0	n:1790000
Cons ci ratio: 1.833057e-03	ci left: 7.180356e-01	ci right 7.193536e-01	k: 1286464	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
ACRC   1790000 perm   1575 sec   (1136 perm/sec)   p_kst 5.586592e-07   p_cons 7.186950e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.049375e-06	k: 0	n:1800000
Cons ci ratio: 1.827855e-03	ci left: 7.180603e-01	ci right 7.193745e-01	k: 1293692	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
ACRC   1800000 perm   1590 sec   (1132 perm/sec)   p_kst 5.555556e-07   p_cons 7.187178e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.038053e-06	k: 0	n:1810000
Cons ci ratio: 1.822789e-03	ci left: 7.180642e-01	ci right 7.193748e-01	k: 1300883	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
ACRC   1810000 perm   1605 sec   (1128 perm/sec)   p_kst 5.524862e-07   p_cons 7.187199e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.026855e-06	k: 0	n:1820000
Cons ci ratio: 1.817597e-03	ci left: 7.181055e-01	ci right 7.194125e-01	k: 1308142	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
ACRC   1820000 perm   1620 sec   (1123 perm/sec)   p_kst 5.494505e-07   p_cons 7.187593e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.015779e-06	k: 0	n:1830000
Cons ci ratio: 1.812591e-03	ci left: 7.181146e-01	ci right 7.194180e-01	k: 1315343	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
ACRC   1830000 perm   1636 sec   (1119 perm/sec)   p_kst 5.464481e-07   p_cons 7.187667e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.004824e-06	k: 0	n:1840000
Cons ci ratio: 1.807685e-03	ci left: 7.181106e-01	ci right 7.194104e-01	k: 1322520	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
ACRC   1840000 perm   1651 sec   (1115 perm/sec)   p_kst 5.434783e-07   p_cons 7.187609e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.993987e-06	k: 0	n:1850000
Cons ci ratio: 1.802760e-03	ci left: 7.181196e-01	ci right 7.194159e-01	k: 1329721	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
ACRC   1850000 perm   1666 sec   (1110 perm/sec)   p_kst 5.405405e-07   p_cons 7.187681e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.983267e-06	k: 0	n:1860000
Cons ci ratio: 1.797888e-03	ci left: 7.181258e-01	ci right 7.194186e-01	k: 1336917	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
ACRC   1860000 perm   1681 sec   (1106 perm/sec)   p_kst 5.376344e-07   p_cons 7.187726e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.972661e-06	k: 0	n:1870000
Cons ci ratio: 1.793088e-03	ci left: 7.181245e-01	ci right 7.194138e-01	k: 1344099	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
ACRC   1870000 perm   1697 sec   (1102 perm/sec)   p_kst 5.347594e-07   p_cons 7.187695e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.962168e-06	k: 0	n:1880000
Cons ci ratio: 1.788314e-03	ci left: 7.181259e-01	ci right 7.194118e-01	k: 1351286	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
ACRC   1880000 perm   1712 sec   (1098 perm/sec)   p_kst 5.319149e-07   p_cons 7.187691e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.951786e-06	k: 0	n:1890000
Cons ci ratio: 1.783623e-03	ci left: 7.181171e-01	ci right 7.193996e-01	k: 1358454	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
ACRC   1890000 perm   1728 sec   (1094 perm/sec)   p_kst 5.291005e-07   p_cons 7.187587e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.941514e-06	k: 0	n:1900000
Cons ci ratio: 1.778846e-03	ci left: 7.181364e-01	ci right 7.194155e-01	k: 1365675	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
ACRC   1900000 perm   1743 sec   (1090 perm/sec)   p_kst 5.263158e-07   p_cons 7.187763e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.931349e-06	k: 0	n:1910000
Cons ci ratio: 1.774210e-03	ci left: 7.181320e-01	ci right 7.194077e-01	k: 1372851	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
ACRC   1910000 perm   1759 sec   (1086 perm/sec)   p_kst 5.235602e-07   p_cons 7.187702e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.921290e-06	k: 0	n:1920000
Cons ci ratio: 1.769569e-03	ci left: 7.181369e-01	ci right 7.194093e-01	k: 1380045	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
ACRC   1920000 perm   1775 sec   (1082 perm/sec)   p_kst 5.208333e-07   p_cons 7.187734e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.911335e-06	k: 0	n:1930000
Cons ci ratio: 1.765044e-03	ci left: 7.181237e-01	ci right 7.193928e-01	k: 1387204	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
ACRC   1930000 perm   1791 sec   (1078 perm/sec)   p_kst 5.181347e-07   p_cons 7.187585e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.901482e-06	k: 0	n:1940000
Cons ci ratio: 1.760578e-03	ci left: 7.181049e-01	ci right 7.193708e-01	k: 1394352	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
ACRC   1940000 perm   1806 sec   (1074 perm/sec)   p_kst 5.154639e-07   p_cons 7.187381e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.891731e-06	k: 0	n:1950000
Cons ci ratio: 1.756250e-03	ci left: 7.180622e-01	ci right 7.193249e-01	k: 1401453	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
ACRC   1950000 perm   1822 sec   (1070 perm/sec)   p_kst 5.128205e-07   p_cons 7.186938e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.882080e-06	k: 0	n:1960000
Cons ci ratio: 1.751810e-03	ci left: 7.180531e-01	ci right 7.193126e-01	k: 1408619	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
ACRC   1960000 perm   1838 sec   (1066 perm/sec)   p_kst 5.102041e-07   p_cons 7.186832e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.872526e-06	k: 0	n:1970000
Cons ci ratio: 1.747387e-03	ci left: 7.180482e-01	ci right 7.193045e-01	k: 1415793	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
ACRC   1970000 perm   1854 sec   (1062 perm/sec)   p_kst 5.076142e-07   p_cons 7.186766e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.863069e-06	k: 0	n:1980000
Cons ci ratio: 1.742955e-03	ci left: 7.180529e-01	ci right 7.193060e-01	k: 1422986	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
ACRC   1980000 perm   1870 sec   (1059 perm/sec)   p_kst 5.050505e-07   p_cons 7.186798e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.853707e-06	k: 0	n:1990000
Cons ci ratio: 1.738710e-03	ci left: 7.180219e-01	ci right 7.192719e-01	k: 1430108	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
ACRC   1990000 perm   1887 sec   (1055 perm/sec)   p_kst 5.025126e-07   p_cons 7.186472e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.844438e-06	k: 0	n:2000000
Cons ci ratio: 1.734496e-03	ci left: 7.179912e-01	ci right 7.192381e-01	k: 1437230	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
ACRC   2000000 perm   1903 sec   (1051 perm/sec)   p_kst 5.000000e-07   p_cons 7.186150e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.835262e-06	k: 0	n:2010000
Cons ci ratio: 1.730172e-03	ci left: 7.179937e-01	ci right 7.192375e-01	k: 1444418	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
ACRC   2010000 perm   1919 sec   (1047 perm/sec)   p_kst 4.975124e-07   p_cons 7.186159e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.826176e-06	k: 0	n:2020000
Cons ci ratio: 1.725872e-03	ci left: 7.179981e-01	ci right 7.192389e-01	k: 1451610	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
ACRC   2020000 perm   1936 sec   (1043 perm/sec)   p_kst 4.950495e-07   p_cons 7.186188e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.817180e-06	k: 0	n:2030000
Cons ci ratio: 1.721589e-03	ci left: 7.180060e-01	ci right 7.192436e-01	k: 1458809	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
ACRC   2030000 perm   1953 sec   (1039 perm/sec)   p_kst 4.926108e-07   p_cons 7.186251e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.808273e-06	k: 0	n:2040000
Cons ci ratio: 1.717190e-03	ci left: 7.180486e-01	ci right 7.192831e-01	k: 1466079	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
ACRC   2040000 perm   1970 sec   (1035 perm/sec)   p_kst 4.901961e-07   p_cons 7.186662e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.799452e-06	k: 0	n:2050000
Cons ci ratio: 1.712886e-03	ci left: 7.180761e-01	ci right 7.193076e-01	k: 1473319	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
ACRC   2050000 perm   1987 sec   (1032 perm/sec)   p_kst 4.878049e-07   p_cons 7.186922e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.790717e-06	k: 0	n:2060000
Cons ci ratio: 1.708801e-03	ci left: 7.180592e-01	ci right 7.192877e-01	k: 1480468	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
ACRC   2060000 perm   2003 sec   (1028 perm/sec)   p_kst 4.854369e-07   p_cons 7.186738e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.782066e-06	k: 0	n:2070000
Cons ci ratio: 1.704784e-03	ci left: 7.180333e-01	ci right 7.192589e-01	k: 1487598	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
ACRC   2070000 perm   2021 sec   (1024 perm/sec)   p_kst 4.830918e-07   p_cons 7.186464e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.773498e-06	k: 0	n:2080000
Cons ci ratio: 1.700533e-03	ci left: 7.180701e-01	ci right 7.192927e-01	k: 1494858	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
ACRC   2080000 perm   2037 sec   (1021 perm/sec)   p_kst 4.807692e-07   p_cons 7.186817e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.765013e-06	k: 0	n:2090000
Cons ci ratio: 1.696387e-03	ci left: 7.180889e-01	ci right 7.193086e-01	k: 1502081	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
ACRC   2090000 perm   2054 sec   (1017 perm/sec)   p_kst 4.784689e-07   p_cons 7.186990e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.756608e-06	k: 0	n:2100000
Cons ci ratio: 1.692367e-03	ci left: 7.180847e-01	ci right 7.193014e-01	k: 1509256	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
ACRC   2100000 perm   2071 sec   (1014 perm/sec)   p_kst 4.761905e-07   p_cons 7.186933e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.748283e-06	k: 0	n:2110000
Cons ci ratio: 1.688373e-03	ci left: 7.180809e-01	ci right 7.192948e-01	k: 1516432	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
ACRC   2110000 perm   2088 sec   (1010 perm/sec)   p_kst 4.739336e-07   p_cons 7.186882e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.740036e-06	k: 0	n:2120000
Cons ci ratio: 1.684377e-03	ci left: 7.180848e-01	ci right 7.192958e-01	k: 1523624	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
ACRC   2120000 perm   2106 sec   (1007 perm/sec)   p_kst 4.716981e-07   p_cons 7.186906e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.731867e-06	k: 0	n:2130000
Cons ci ratio: 1.680410e-03	ci left: 7.180881e-01	ci right 7.192963e-01	k: 1530815	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
ACRC   2130000 perm   2123 sec   (1003 perm/sec)   p_kst 4.694836e-07   p_cons 7.186925e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.723774e-06	k: 0	n:2140000
Cons ci ratio: 1.676462e-03	ci left: 7.180938e-01	ci right 7.192991e-01	k: 1538011	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
ACRC   2140000 perm   2140 sec   (1000 perm/sec)   p_kst 4.672897e-07   p_cons 7.186967e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.715756e-06	k: 0	n:2150000
Cons ci ratio: 1.672608e-03	ci left: 7.180831e-01	ci right 7.192856e-01	k: 1545172	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
ACRC   2150000 perm   2158 sec   (996 perm/sec)   p_kst 4.651163e-07   p_cons 7.186847e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.707813e-06	k: 0	n:2160000
Cons ci ratio: 1.668816e-03	ci left: 7.180642e-01	ci right 7.192639e-01	k: 1552315	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
ACRC   2160000 perm   2175 sec   (993 perm/sec)   p_kst 4.629630e-07   p_cons 7.186644e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.699943e-06	k: 0	n:2170000
Cons ci ratio: 1.665078e-03	ci left: 7.180385e-01	ci right 7.192355e-01	k: 1559443	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
ACRC   2170000 perm   2193 sec   (990 perm/sec)   p_kst 4.608295e-07   p_cons 7.186373e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.692145e-06	k: 0	n:2180000
Cons ci ratio: 1.661206e-03	ci left: 7.180517e-01	ci right 7.192459e-01	k: 1566655	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
ACRC   2180000 perm   2210 sec   (986 perm/sec)   p_kst 4.587156e-07   p_cons 7.186491e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.684418e-06	k: 0	n:2190000
Cons ci ratio: 1.657284e-03	ci left: 7.180834e-01	ci right 7.192749e-01	k: 1573908	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
ACRC   2190000 perm   2228 sec   (983 perm/sec)   p_kst 4.566210e-07   p_cons 7.186795e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.676762e-06	k: 0	n:2200000
Cons ci ratio: 1.653567e-03	ci left: 7.180717e-01	ci right 7.192605e-01	k: 1581066	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
ACRC   2200000 perm   2246 sec   (980 perm/sec)   p_kst 4.545455e-07   p_cons 7.186664e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.669175e-06	k: 0	n:2210000
Cons ci ratio: 1.649886e-03	ci left: 7.180573e-01	ci right 7.192435e-01	k: 1588218	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
ACRC   2210000 perm   2263 sec   (976 perm/sec)   p_kst 4.524887e-07   p_cons 7.186507e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.661656e-06	k: 0	n:2220000
Cons ci ratio: 1.646317e-03	ci left: 7.180215e-01	ci right 7.192050e-01	k: 1595322	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
ACRC   2220000 perm   2281 sec   (973 perm/sec)   p_kst 4.504505e-07   p_cons 7.186135e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.654205e-06	k: 0	n:2230000
Cons ci ratio: 1.642705e-03	ci left: 7.180021e-01	ci right 7.191830e-01	k: 1602462	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
ACRC   2230000 perm   2299 sec   (970 perm/sec)   p_kst 4.484305e-07   p_cons 7.185928e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.646820e-06	k: 0	n:2240000
Cons ci ratio: 1.638939e-03	ci left: 7.180271e-01	ci right 7.192053e-01	k: 1609701	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
ACRC   2240000 perm   2317 sec   (967 perm/sec)   p_kst 4.464286e-07   p_cons 7.186165e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.639501e-06	k: 0	n:2250000
Cons ci ratio: 1.635259e-03	ci left: 7.180368e-01	ci right 7.192124e-01	k: 1616906	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
ACRC   2250000 perm   2335 sec   (963 perm/sec)   p_kst 4.444444e-07   p_cons 7.186249e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.632246e-06	k: 0	n:2260000
Cons ci ratio: 1.631709e-03	ci left: 7.180203e-01	ci right 7.191933e-01	k: 1624052	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
ACRC   2260000 perm   2354 sec   (960 perm/sec)   p_kst 4.424779e-07   p_cons 7.186071e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.625056e-06	k: 0	n:2270000
Cons ci ratio: 1.628057e-03	ci left: 7.180348e-01	ci right 7.192052e-01	k: 1631268	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
ACRC   2270000 perm   2372 sec   (957 perm/sec)   p_kst 4.405286e-07   p_cons 7.186203e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.617928e-06	k: 0	n:2280000
Cons ci ratio: 1.624507e-03	ci left: 7.180303e-01	ci right 7.191981e-01	k: 1638441	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
ACRC   2280000 perm   2391 sec   (953 perm/sec)   p_kst 4.385965e-07   p_cons 7.186145e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.610863e-06	k: 0	n:2290000
Cons ci ratio: 1.620968e-03	ci left: 7.180284e-01	ci right 7.191937e-01	k: 1645620	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
ACRC   2290000 perm   2410 sec   (950 perm/sec)   p_kst 4.366812e-07   p_cons 7.186114e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.603859e-06	k: 0	n:2300000
Cons ci ratio: 1.617509e-03	ci left: 7.180127e-01	ci right 7.191754e-01	k: 1652767	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
ACRC   2300000 perm   2428 sec   (947 perm/sec)   p_kst 4.347826e-07   p_cons 7.185943e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.596916e-06	k: 0	n:2310000
Cons ci ratio: 1.614102e-03	ci left: 7.179893e-01	ci right 7.191496e-01	k: 1659896	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
ACRC   2310000 perm   2447 sec   (944 perm/sec)   p_kst 4.329004e-07   p_cons 7.185697e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.590033e-06	k: 0	n:2320000
Cons ci ratio: 1.610461e-03	ci left: 7.180304e-01	ci right 7.191881e-01	k: 1667174	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
ACRC   2320000 perm   2466 sec   (941 perm/sec)   p_kst 4.310345e-07   p_cons 7.186095e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.583209e-06	k: 0	n:2330000
Cons ci ratio: 1.607155e-03	ci left: 7.179929e-01	ci right 7.191482e-01	k: 1674270	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
ACRC   2330000 perm   2484 sec   (938 perm/sec)   p_kst 4.291845e-07   p_cons 7.185708e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.576443e-06	k: 0	n:2340000
Cons ci ratio: 1.603675e-03	ci left: 7.180050e-01	ci right 7.191577e-01	k: 1681481	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
ACRC   2340000 perm   2503 sec   (935 perm/sec)   p_kst 4.273504e-07   p_cons 7.185816e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.569735e-06	k: 0	n:2350000
Cons ci ratio: 1.600317e-03	ci left: 7.179914e-01	ci right 7.191417e-01	k: 1688632	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
ACRC   2350000 perm   2522 sec   (932 perm/sec)   p_kst 4.255319e-07   p_cons 7.185668e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.563083e-06	k: 0	n:2360000
Cons ci ratio: 1.596951e-03	ci left: 7.179855e-01	ci right 7.191334e-01	k: 1695801	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
ACRC   2360000 perm   2542 sec   (929 perm/sec)   p_kst 4.237288e-07   p_cons 7.185597e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.556488e-06	k: 0	n:2370000
Cons ci ratio: 1.593526e-03	ci left: 7.180000e-01	ci right 7.191455e-01	k: 1703018	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
ACRC   2370000 perm   2561 sec   (926 perm/sec)   p_kst 4.219409e-07   p_cons 7.185730e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.549948e-06	k: 0	n:2380000
Cons ci ratio: 1.590237e-03	ci left: 7.179853e-01	ci right 7.191284e-01	k: 1710166	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
ACRC   2380000 perm   2580 sec   (922 perm/sec)   p_kst 4.201681e-07   p_cons 7.185571e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.543463e-06	k: 0	n:2390000
Cons ci ratio: 1.586969e-03	ci left: 7.179708e-01	ci right 7.191115e-01	k: 1717314	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
ACRC   2390000 perm   2599 sec   (919 perm/sec)   p_kst 4.184100e-07   p_cons 7.185414e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.537032e-06	k: 0	n:2400000
Cons ci ratio: 1.583629e-03	ci left: 7.179797e-01	ci right 7.191181e-01	k: 1724518	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
ACRC   2400000 perm   2618 sec   (917 perm/sec)   p_kst 4.166667e-07   p_cons 7.185492e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.530654e-06	k: 0	n:2410000
Cons ci ratio: 1.580333e-03	ci left: 7.179828e-01	ci right 7.191187e-01	k: 1731708	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
ACRC   2410000 perm   2638 sec   (914 perm/sec)   p_kst 4.149378e-07   p_cons 7.185510e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.524329e-06	k: 0	n:2420000
Cons ci ratio: 1.577097e-03	ci left: 7.179755e-01	ci right 7.191091e-01	k: 1738873	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
ACRC   2420000 perm   2657 sec   (911 perm/sec)   p_kst 4.132231e-07   p_cons 7.185426e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.518056e-06	k: 0	n:2430000
Cons ci ratio: 1.573912e-03	ci left: 7.179604e-01	ci right 7.190917e-01	k: 1746019	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
ACRC   2430000 perm   2676 sec   (908 perm/sec)   p_kst 4.115226e-07   p_cons 7.185263e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.511835e-06	k: 0	n:2440000
Cons ci ratio: 1.570822e-03	ci left: 7.179258e-01	ci right 7.190548e-01	k: 1753117	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
ACRC   2440000 perm   2696 sec   (905 perm/sec)   p_kst 4.098361e-07   p_cons 7.184906e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.505664e-06	k: 0	n:2450000
Cons ci ratio: 1.567535e-03	ci left: 7.179470e-01	ci right 7.190737e-01	k: 1760351	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
ACRC   2450000 perm   2715 sec   (902 perm/sec)   p_kst 4.081633e-07   p_cons 7.185106e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.499543e-06	k: 0	n:2460000
Cons ci ratio: 1.564335e-03	ci left: 7.179510e-01	ci right 7.190753e-01	k: 1767543	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
ACRC   2460000 perm   2735 sec   (900 perm/sec)   p_kst 4.065041e-07   p_cons 7.185134e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.493472e-06	k: 0	n:2470000
Cons ci ratio: 1.561145e-03	ci left: 7.179573e-01	ci right 7.190794e-01	k: 1774741	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
ACRC   2470000 perm   2755 sec   (897 perm/sec)   p_kst 4.048583e-07   p_cons 7.185186e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.487450e-06	k: 0	n:2480000
Cons ci ratio: 1.557992e-03	ci left: 7.179592e-01	ci right 7.190790e-01	k: 1781928	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
ACRC   2480000 perm   2774 sec   (894 perm/sec)   p_kst 4.032258e-07   p_cons 7.185194e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.481477e-06	k: 0	n:2490000
Cons ci ratio: 1.554865e-03	ci left: 7.179590e-01	ci right 7.190766e-01	k: 1789110	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
ACRC   2490000 perm   2794 sec   (891 perm/sec)   p_kst 4.016064e-07   p_cons 7.185181e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.475551e-06	k: 0	n:2500000
Cons ci ratio: 1.551668e-03	ci left: 7.179821e-01	ci right 7.190974e-01	k: 1796350	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
ACRC   2500000 perm   2814 sec   (888 perm/sec)   p_kst 4.000000e-07   p_cons 7.185400e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.469672e-06	k: 0	n:2510000
Cons ci ratio: 1.548561e-03	ci left: 7.179866e-01	ci right 7.190997e-01	k: 1803544	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
ACRC   2510000 perm   2834 sec   (886 perm/sec)   p_kst 3.984064e-07   p_cons 7.185434e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.463840e-06	k: 0	n:2520000
Cons ci ratio: 1.545454e-03	ci left: 7.179959e-01	ci right 7.191068e-01	k: 1810750	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
ACRC   2520000 perm   2854 sec   (883 perm/sec)   p_kst 3.968254e-07   p_cons 7.185516e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.458054e-06	k: 0	n:2530000
Cons ci ratio: 1.542491e-03	ci left: 7.179723e-01	ci right 7.190810e-01	k: 1817873	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
ACRC   2530000 perm   2874 sec   (880 perm/sec)   p_kst 3.952569e-07   p_cons 7.185269e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.452314e-06	k: 0	n:2540000
Cons ci ratio: 1.539479e-03	ci left: 7.179662e-01	ci right 7.190727e-01	k: 1825040	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
ACRC   2540000 perm   2894 sec   (878 perm/sec)   p_kst 3.937008e-07   p_cons 7.185197e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.446618e-06	k: 0	n:2550000
Cons ci ratio: 1.536473e-03	ci left: 7.179633e-01	ci right 7.190676e-01	k: 1832215	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
ACRC   2550000 perm   2914 sec   (875 perm/sec)   p_kst 3.921569e-07   p_cons 7.185157e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.440968e-06	k: 0	n:2560000
Cons ci ratio: 1.533480e-03	ci left: 7.179615e-01	ci right 7.190637e-01	k: 1839393	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
ACRC   2560000 perm   2934 sec   (873 perm/sec)   p_kst 3.906250e-07   p_cons 7.185129e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.435361e-06	k: 0	n:2570000
Cons ci ratio: 1.530520e-03	ci left: 7.179556e-01	ci right 7.190556e-01	k: 1846560	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
ACRC   2570000 perm   2954 sec   (870 perm/sec)   p_kst 3.891051e-07   p_cons 7.185058e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.429797e-06	k: 0	n:2580000
Cons ci ratio: 1.527547e-03	ci left: 7.179578e-01	ci right 7.190557e-01	k: 1853748	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
ACRC   2580000 perm   2975 sec   (867 perm/sec)   p_kst 3.875969e-07   p_cons 7.185070e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.424277e-06	k: 0	n:2590000
Cons ci ratio: 1.524662e-03	ci left: 7.179410e-01	ci right 7.190369e-01	k: 1860887	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
ACRC   2590000 perm   2995 sec   (865 perm/sec)   p_kst 3.861004e-07   p_cons 7.184892e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.418799e-06	k: 0	n:2600000
Cons ci ratio: 1.521741e-03	ci left: 7.179383e-01	ci right 7.190320e-01	k: 1868062	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
ACRC   2600000 perm   3016 sec   (862 perm/sec)   p_kst 3.846154e-07   p_cons 7.184854e-01   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.413363e-06	k: 0	n:2610000
Cons ci ratio: 1.518866e-03	ci left: 7.179279e-01	ci right 7.190195e-01	k: 1875217	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
ACRC   2610000 perm   3037 sec   (859 perm/sec)   p_kst 3.831418e-07   p_cons 7.184739e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.407968e-06	k: 0	n:2620000
Cons ci ratio: 1.515953e-03	ci left: 7.179321e-01	ci right 7.190216e-01	k: 1882410	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
ACRC   2620000 perm   3058 sec   (857 perm/sec)   p_kst 3.816794e-07   p_cons 7.184771e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.402615e-06	k: 0	n:2630000
Cons ci ratio: 1.513142e-03	ci left: 7.179134e-01	ci right 7.190009e-01	k: 1889543	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
ACRC   2630000 perm   3078 sec   (854 perm/sec)   p_kst 3.802281e-07   p_cons 7.184574e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.397302e-06	k: 0	n:2640000
Cons ci ratio: 1.510407e-03	ci left: 7.178786e-01	ci right 7.189641e-01	k: 1896633	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
ACRC   2640000 perm   3099 sec   (852 perm/sec)   p_kst 3.787879e-07   p_cons 7.184216e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.392029e-06	k: 0	n:2650000
Cons ci ratio: 1.507666e-03	ci left: 7.178497e-01	ci right 7.189332e-01	k: 1903738	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
ACRC   2650000 perm   3121 sec   (849 perm/sec)   p_kst 3.773585e-07   p_cons 7.183917e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.386796e-06	k: 0	n:2660000
Cons ci ratio: 1.504766e-03	ci left: 7.178677e-01	ci right 7.189491e-01	k: 1910967	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
ACRC   2660000 perm   3142 sec   (847 perm/sec)   p_kst 3.759398e-07   p_cons 7.184086e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.381602e-06	k: 0	n:2670000
Cons ci ratio: 1.501953e-03	ci left: 7.178668e-01	ci right 7.189462e-01	k: 1918146	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
ACRC   2670000 perm   3163 sec   (844 perm/sec)   p_kst 3.745318e-07   p_cons 7.184067e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.376447e-06	k: 0	n:2680000
Cons ci ratio: 1.499090e-03	ci left: 7.178835e-01	ci right 7.189608e-01	k: 1925372	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
ACRC   2680000 perm   3185 sec   (841 perm/sec)   p_kst 3.731343e-07   p_cons 7.184224e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.371330e-06	k: 0	n:2690000
Cons ci ratio: 1.496322e-03	ci left: 7.178788e-01	ci right 7.189542e-01	k: 1932541	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
ACRC   2690000 perm   3206 sec   (839 perm/sec)   p_kst 3.717472e-07   p_cons 7.184167e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.366251e-06	k: 0	n:2700000
Cons ci ratio: 1.493527e-03	ci left: 7.178857e-01	ci right 7.189590e-01	k: 1939741	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
ACRC   2700000 perm   3228 sec   (836 perm/sec)   p_kst 3.703704e-07   p_cons 7.184226e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.361209e-06	k: 0	n:2710000
Cons ci ratio: 1.490670e-03	ci left: 7.179136e-01	ci right 7.189849e-01	k: 1946998	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
ACRC   2710000 perm   3249 sec   (834 perm/sec)   p_kst 3.690037e-07   p_cons 7.184494e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.356205e-06	k: 0	n:2720000
Cons ci ratio: 1.487929e-03	ci left: 7.179140e-01	ci right 7.189833e-01	k: 1954181	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
ACRC   2720000 perm   3271 sec   (832 perm/sec)   p_kst 3.676471e-07   p_cons 7.184489e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.351237e-06	k: 0	n:2730000
Cons ci ratio: 1.485203e-03	ci left: 7.179144e-01	ci right 7.189818e-01	k: 1961364	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
ACRC   2730000 perm   3292 sec   (829 perm/sec)   p_kst 3.663004e-07   p_cons 7.184484e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.346305e-06	k: 0	n:2740000
Cons ci ratio: 1.482465e-03	ci left: 7.179225e-01	ci right 7.189880e-01	k: 1968568	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
ACRC   2740000 perm   3314 sec   (827 perm/sec)   p_kst 3.649635e-07   p_cons 7.184555e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.341410e-06	k: 0	n:2750000
Cons ci ratio: 1.479817e-03	ci left: 7.179098e-01	ci right 7.189733e-01	k: 1975715	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
ACRC   2750000 perm   3335 sec   (824 perm/sec)   p_kst 3.636364e-07   p_cons 7.184418e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.336550e-06	k: 0	n:2760000
Cons ci ratio: 1.477102e-03	ci left: 7.179193e-01	ci right 7.189809e-01	k: 1982923	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
ACRC   2760000 perm   3357 sec   (822 perm/sec)   p_kst 3.623188e-07   p_cons 7.184504e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.331725e-06	k: 0	n:2770000
Cons ci ratio: 1.474472e-03	ci left: 7.179097e-01	ci right 7.189693e-01	k: 1990078	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
ACRC   2770000 perm   3379 sec   (820 perm/sec)   p_kst 3.610108e-07   p_cons 7.184397e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.326934e-06	k: 0	n:2780000
Cons ci ratio: 1.471741e-03	ci left: 7.179317e-01	ci right 7.189894e-01	k: 1997321	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
ACRC   2780000 perm   3401 sec   (817 perm/sec)   p_kst 3.597122e-07   p_cons 7.184608e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.322178e-06	k: 0	n:2790000
Cons ci ratio: 1.469054e-03	ci left: 7.179457e-01	ci right 7.190015e-01	k: 2004542	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
ACRC   2790000 perm   3423 sec   (815 perm/sec)   p_kst 3.584229e-07   p_cons 7.184738e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.317456e-06	k: 0	n:2800000
Cons ci ratio: 1.466502e-03	ci left: 7.179264e-01	ci right 7.189803e-01	k: 2011670	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
ACRC   2800000 perm   3446 sec   (813 perm/sec)   p_kst 3.571429e-07   p_cons 7.184536e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.312768e-06	k: 0	n:2810000
Cons ci ratio: 1.463842e-03	ci left: 7.179406e-01	ci right 7.189927e-01	k: 2018892	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
ACRC   2810000 perm   3468 sec   (810 perm/sec)   p_kst 3.558719e-07   p_cons 7.184669e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.308112e-06	k: 0	n:2820000
Cons ci ratio: 1.461201e-03	ci left: 7.179534e-01	ci right 7.190036e-01	k: 2026110	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
ACRC   2820000 perm   3491 sec   (808 perm/sec)   p_kst 3.546099e-07   p_cons 7.184787e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.303490e-06	k: 0	n:2830000
Cons ci ratio: 1.458642e-03	ci left: 7.179477e-01	ci right 7.189960e-01	k: 2033276	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
ACRC   2830000 perm   3513 sec   (806 perm/sec)   p_kst 3.533569e-07   p_cons 7.184721e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.298900e-06	k: 0	n:2840000
Cons ci ratio: 1.456146e-03	ci left: 7.179279e-01	ci right 7.189744e-01	k: 2040402	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
ACRC   2840000 perm   3535 sec   (803 perm/sec)   p_kst 3.521127e-07   p_cons 7.184514e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.294343e-06	k: 0	n:2850000
Cons ci ratio: 1.453554e-03	ci left: 7.179385e-01	ci right 7.189832e-01	k: 2047614	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
ACRC   2850000 perm   3558 sec   (801 perm/sec)   p_kst 3.508772e-07   p_cons 7.184611e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.289817e-06	k: 0	n:2860000
Cons ci ratio: 1.450931e-03	ci left: 7.179616e-01	ci right 7.190044e-01	k: 2054862	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
ACRC   2860000 perm   3580 sec   (799 perm/sec)   p_kst 3.496503e-07   p_cons 7.184832e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.285323e-06	k: 0	n:2870000
Cons ci ratio: 1.448316e-03	ci left: 7.179863e-01	ci right 7.190272e-01	k: 2062115	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
ACRC   2870000 perm   3604 sec   (796 perm/sec)   p_kst 3.484321e-07   p_cons 7.185070e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.280860e-06	k: 0	n:2880000
Cons ci ratio: 1.445841e-03	ci left: 7.179757e-01	ci right 7.190148e-01	k: 2069267	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
ACRC   2880000 perm   3626 sec   (794 perm/sec)   p_kst 3.472222e-07   p_cons 7.184955e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.276428e-06	k: 0	n:2890000
Cons ci ratio: 1.443383e-03	ci left: 7.179638e-01	ci right 7.190012e-01	k: 2076415	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
ACRC   2890000 perm   3649 sec   (792 perm/sec)   p_kst 3.460208e-07   p_cons 7.184827e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.272027e-06	k: 0	n:2900000
Cons ci ratio: 1.441027e-03	ci left: 7.179268e-01	ci right 7.189624e-01	k: 2083490	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
ACRC   2900000 perm   3671 sec   (790 perm/sec)   p_kst 3.448276e-07   p_cons 7.184448e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.267655e-06	k: 0	n:2910000
Cons ci ratio: 1.438542e-03	ci left: 7.179296e-01	ci right 7.189634e-01	k: 2090680	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
ACRC   2910000 perm   3694 sec   (788 perm/sec)   p_kst 3.436426e-07   p_cons 7.184467e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.263314e-06	k: 0	n:2920000
Cons ci ratio: 1.436165e-03	ci left: 7.179057e-01	ci right 7.189377e-01	k: 2097792	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
ACRC   2920000 perm   3717 sec   (786 perm/sec)   p_kst 3.424658e-07   p_cons 7.184219e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.259002e-06	k: 0	n:2930000
Cons ci ratio: 1.433741e-03	ci left: 7.178983e-01	ci right 7.189286e-01	k: 2104952	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
ACRC   2930000 perm   3741 sec   (783 perm/sec)   p_kst 3.412969e-07   p_cons 7.184137e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.254720e-06	k: 0	n:2940000
Cons ci ratio: 1.431277e-03	ci left: 7.179059e-01	ci right 7.189345e-01	k: 2112156	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
ACRC   2940000 perm   3765 sec   (781 perm/sec)   p_kst 3.401361e-07   p_cons 7.184204e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.250467e-06	k: 0	n:2950000
Cons ci ratio: 1.428839e-03	ci left: 7.179094e-01	ci right 7.189363e-01	k: 2119348	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
ACRC   2950000 perm   3790 sec   (778 perm/sec)   p_kst 3.389831e-07   p_cons 7.184231e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.246242e-06	k: 0	n:2960000
Cons ci ratio: 1.426426e-03	ci left: 7.179095e-01	ci right 7.189346e-01	k: 2126530	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
ACRC   2960000 perm   3813 sec   (776 perm/sec)   p_kst 3.378378e-07   p_cons 7.184223e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.242046e-06	k: 0	n:2970000
Cons ci ratio: 1.423932e-03	ci left: 7.179363e-01	ci right 7.189596e-01	k: 2133791	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
ACRC   2970000 perm   3838 sec   (774 perm/sec)   p_kst 3.367003e-07   p_cons 7.184481e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.237878e-06	k: 0	n:2980000
Cons ci ratio: 1.421599e-03	ci left: 7.179205e-01	ci right 7.189422e-01	k: 2140926	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
ACRC   2980000 perm   3861 sec   (772 perm/sec)   p_kst 3.355705e-07   p_cons 7.184315e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.233738e-06	k: 0	n:2990000
Cons ci ratio: 1.419243e-03	ci left: 7.179149e-01	ci right 7.189348e-01	k: 2148091	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
ACRC   2990000 perm   3886 sec   (770 perm/sec)   p_kst 3.344482e-07   p_cons 7.184251e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.229626e-06	k: 0	n:3000000
Cons ci ratio: 1.416839e-03	ci left: 7.179260e-01	ci right 7.189442e-01	k: 2155306	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
ACRC   3000000 perm   3909 sec   (767 perm/sec)   p_kst 3.333333e-07   p_cons 7.184353e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.225541e-06	k: 0	n:3010000
Cons ci ratio: 1.414547e-03	ci left: 7.179088e-01	ci right 7.189253e-01	k: 2162436	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
ACRC   3010000 perm   3934 sec   (765 perm/sec)   p_kst 3.322259e-07   p_cons 7.184173e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.221483e-06	k: 0	n:3020000
Cons ci ratio: 1.412170e-03	ci left: 7.179192e-01	ci right 7.189340e-01	k: 2169649	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
ACRC   3020000 perm   3960 sec   (763 perm/sec)   p_kst 3.311258e-07   p_cons 7.184268e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.217451e-06	k: 0	n:3030000
Cons ci ratio: 1.409890e-03	ci left: 7.179051e-01	ci right 7.189183e-01	k: 2176788	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
ACRC   3030000 perm   3985 sec   (760 perm/sec)   p_kst 3.300330e-07   p_cons 7.184119e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.213446e-06	k: 0	n:3040000
Cons ci ratio: 1.407596e-03	ci left: 7.178980e-01	ci right 7.189095e-01	k: 2183948	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
ACRC   3040000 perm   4010 sec   (758 perm/sec)   p_kst 3.289474e-07   p_cons 7.184039e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.209468e-06	k: 0	n:3050000
Cons ci ratio: 1.405307e-03	ci left: 7.178929e-01	ci right 7.189028e-01	k: 2191114	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
ACRC   3050000 perm   4034 sec   (756 perm/sec)   p_kst 3.278689e-07   p_cons 7.183980e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.205515e-06	k: 0	n:3060000
Cons ci ratio: 1.402970e-03	ci left: 7.179052e-01	ci right 7.189134e-01	k: 2198333	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
ACRC   3060000 perm   4058 sec   (754 perm/sec)   p_kst 3.267974e-07   p_cons 7.184095e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.201589e-06	k: 0	n:3070000
Cons ci ratio: 1.400720e-03	ci left: 7.178952e-01	ci right 7.189018e-01	k: 2205484	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
ACRC   3070000 perm   4082 sec   (752 perm/sec)   p_kst 3.257329e-07   p_cons 7.183987e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.197687e-06	k: 0	n:3080000
Cons ci ratio: 1.398498e-03	ci left: 7.178804e-01	ci right 7.188854e-01	k: 2212620	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
ACRC   3080000 perm   4106 sec   (750 perm/sec)   p_kst 3.246753e-07   p_cons 7.183831e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.193811e-06	k: 0	n:3090000
Cons ci ratio: 1.396248e-03	ci left: 7.178771e-01	ci right 7.188804e-01	k: 2219791	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
ACRC   3090000 perm   4130 sec   (748 perm/sec)   p_kst 3.236246e-07   p_cons 7.183790e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.189960e-06	k: 0	n:3100000
Cons ci ratio: 1.394048e-03	ci left: 7.178622e-01	ci right 7.188639e-01	k: 2226926	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
ACRC   3100000 perm   4155 sec   (746 perm/sec)   p_kst 3.225806e-07   p_cons 7.183632e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.186134e-06	k: 0	n:3110000
Cons ci ratio: 1.391778e-03	ci left: 7.178708e-01	ci right 7.188709e-01	k: 2234134	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
ACRC   3110000 perm   4179 sec   (744 perm/sec)   p_kst 3.215434e-07   p_cons 7.183711e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.182332e-06	k: 0	n:3120000
Cons ci ratio: 1.389586e-03	ci left: 7.178598e-01	ci right 7.188584e-01	k: 2241281	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
ACRC   3120000 perm   4203 sec   (742 perm/sec)   p_kst 3.205128e-07   p_cons 7.183593e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.178555e-06	k: 0	n:3130000
Cons ci ratio: 1.387247e-03	ci left: 7.178950e-01	ci right 7.188919e-01	k: 2248572	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
ACRC   3130000 perm   4228 sec   (740 perm/sec)   p_kst 3.194888e-07   p_cons 7.183936e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.174802e-06	k: 0	n:3140000
Cons ci ratio: 1.384955e-03	ci left: 7.179197e-01	ci right 7.189150e-01	k: 2255831	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
ACRC   3140000 perm   4252 sec   (738 perm/sec)   p_kst 3.184713e-07   p_cons 7.184175e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.171072e-06	k: 0	n:3150000
Cons ci ratio: 1.382826e-03	ci left: 7.178994e-01	ci right 7.188932e-01	k: 2262949	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
ACRC   3150000 perm   4277 sec   (737 perm/sec)   p_kst 3.174603e-07   p_cons 7.183965e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.167366e-06	k: 0	n:3160000
Cons ci ratio: 1.380597e-03	ci left: 7.179120e-01	ci right 7.189041e-01	k: 2270170	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
ACRC   3160000 perm   4302 sec   (735 perm/sec)   p_kst 3.164557e-07   p_cons 7.184082e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.163684e-06	k: 0	n:3170000
Cons ci ratio: 1.378438e-03	ci left: 7.179067e-01	ci right 7.188973e-01	k: 2277335	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
ACRC   3170000 perm   4327 sec   (733 perm/sec)   p_kst 3.154574e-07   p_cons 7.184022e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.160024e-06	k: 0	n:3180000
Cons ci ratio: 1.376258e-03	ci left: 7.179106e-01	ci right 7.188997e-01	k: 2284529	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
ACRC   3180000 perm   4351 sec   (731 perm/sec)   p_kst 3.144654e-07   p_cons 7.184053e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.156388e-06	k: 0	n:3190000
Cons ci ratio: 1.374100e-03	ci left: 7.179111e-01	ci right 7.188985e-01	k: 2291712	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
ACRC   3190000 perm   4376 sec   (729 perm/sec)   p_kst 3.134796e-07   p_cons 7.184050e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.152774e-06	k: 0	n:3200000
Cons ci ratio: 1.372000e-03	ci left: 7.178975e-01	ci right 7.188834e-01	k: 2298850	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
ACRC   3200000 perm   4402 sec   (727 perm/sec)   p_kst 3.125000e-07   p_cons 7.183906e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.149183e-06	k: 0	n:3210000
Cons ci ratio: 1.369832e-03	ci left: 7.179070e-01	ci right 7.188914e-01	k: 2306062	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
ACRC   3210000 perm   4428 sec   (725 perm/sec)   p_kst 3.115265e-07   p_cons 7.183994e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.145614e-06	k: 0	n:3220000
Cons ci ratio: 1.367651e-03	ci left: 7.179233e-01	ci right 7.189061e-01	k: 2313296	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
ACRC   3220000 perm   4453 sec   (723 perm/sec)   p_kst 3.105590e-07   p_cons 7.184149e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.142067e-06	k: 0	n:3230000
Cons ci ratio: 1.365527e-03	ci left: 7.179256e-01	ci right 7.189069e-01	k: 2320485	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
ACRC   3230000 perm   4478 sec   (721 perm/sec)   p_kst 3.095975e-07   p_cons 7.184164e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.138542e-06	k: 0	n:3240000
Cons ci ratio: 1.363381e-03	ci left: 7.179374e-01	ci right 7.189172e-01	k: 2327705	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
ACRC   3240000 perm   4503 sec   (720 perm/sec)   p_kst 3.086420e-07   p_cons 7.184275e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.135039e-06	k: 0	n:3250000
Cons ci ratio: 1.361273e-03	ci left: 7.179408e-01	ci right 7.189191e-01	k: 2334898	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
ACRC   3250000 perm   4528 sec   (718 perm/sec)   p_kst 3.076923e-07   p_cons 7.184302e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.131557e-06	k: 0	n:3260000
Cons ci ratio: 1.359230e-03	ci left: 7.179277e-01	ci right 7.189045e-01	k: 2342037	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
ACRC   3260000 perm   4553 sec   (716 perm/sec)   p_kst 3.067485e-07   p_cons 7.184163e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.128097e-06	k: 0	n:3270000
Cons ci ratio: 1.357258e-03	ci left: 7.178962e-01	ci right 7.188716e-01	k: 2349116	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
ACRC   3270000 perm   4579 sec   (714 perm/sec)   p_kst 3.058104e-07   p_cons 7.183841e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.124658e-06	k: 0	n:3280000
Cons ci ratio: 1.355203e-03	ci left: 7.178922e-01	ci right 7.188660e-01	k: 2356284	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
ACRC   3280000 perm   4604 sec   (712 perm/sec)   p_kst 3.048780e-07   p_cons 7.183793e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.121239e-06	k: 0	n:3290000
Cons ci ratio: 1.353161e-03	ci left: 7.178872e-01	ci right 7.188595e-01	k: 2363449	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
ACRC   3290000 perm   4630 sec   (711 perm/sec)   p_kst 3.039514e-07   p_cons 7.183736e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.117842e-06	k: 0	n:3300000
Cons ci ratio: 1.351080e-03	ci left: 7.178968e-01	ci right 7.188677e-01	k: 2370662	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
ACRC   3300000 perm   4656 sec   (709 perm/sec)   p_kst 3.030303e-07   p_cons 7.183824e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.114464e-06	k: 0	n:3310000
Cons ci ratio: 1.349014e-03	ci left: 7.179045e-01	ci right 7.188739e-01	k: 2377869	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
ACRC   3310000 perm   4681 sec   (707 perm/sec)   p_kst 3.021148e-07   p_cons 7.183894e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.111108e-06	k: 0	n:3320000
Cons ci ratio: 1.346999e-03	ci left: 7.178999e-01	ci right 7.188678e-01	k: 2385035	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
ACRC   3320000 perm   4707 sec   (705 perm/sec)   p_kst 3.012048e-07   p_cons 7.183840e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.107771e-06	k: 0	n:3330000
Cons ci ratio: 1.344970e-03	ci left: 7.179022e-01	ci right 7.188686e-01	k: 2392224	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
ACRC   3330000 perm   4733 sec   (704 perm/sec)   p_kst 3.003003e-07   p_cons 7.183856e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.104454e-06	k: 0	n:3340000
Cons ci ratio: 1.343067e-03	ci left: 7.178691e-01	ci right 7.188341e-01	k: 2399295	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
ACRC   3340000 perm   4759 sec   (702 perm/sec)   p_kst 2.994012e-07   p_cons 7.183518e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.101157e-06	k: 0	n:3350000
Cons ci ratio: 1.341028e-03	ci left: 7.178798e-01	ci right 7.188434e-01	k: 2406512	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
ACRC   3350000 perm   4785 sec   (700 perm/sec)   p_kst 2.985075e-07   p_cons 7.183618e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.097880e-06	k: 0	n:3360000
Cons ci ratio: 1.339067e-03	ci left: 7.178696e-01	ci right 7.188318e-01	k: 2413659	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
ACRC   3360000 perm   4811 sec   (698 perm/sec)   p_kst 2.976190e-07   p_cons 7.183509e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.094622e-06	k: 0	n:3370000
Cons ci ratio: 1.337078e-03	ci left: 7.178705e-01	ci right 7.188312e-01	k: 2420843	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
ACRC   3370000 perm   4837 sec   (697 perm/sec)   p_kst 2.967359e-07   p_cons 7.183510e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.091384e-06	k: 0	n:3380000
Cons ci ratio: 1.334997e-03	ci left: 7.179021e-01	ci right 7.188614e-01	k: 2428131	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
ACRC   3380000 perm   4864 sec   (695 perm/sec)   p_kst 2.958580e-07   p_cons 7.183820e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.088164e-06	k: 0	n:3390000
Cons ci ratio: 1.333065e-03	ci left: 7.178911e-01	ci right 7.188490e-01	k: 2435275	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
ACRC   3390000 perm   4890 sec   (693 perm/sec)   p_kst 2.949853e-07   p_cons 7.183702e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.084964e-06	k: 0	n:3400000
Cons ci ratio: 1.331068e-03	ci left: 7.179025e-01	ci right 7.188589e-01	k: 2442495	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
ACRC   3400000 perm   4917 sec   (692 perm/sec)   p_kst 2.941176e-07   p_cons 7.183809e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.081782e-06	k: 0	n:3410000
Cons ci ratio: 1.329198e-03	ci left: 7.178777e-01	ci right 7.188328e-01	k: 2449592	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
ACRC   3410000 perm   4943 sec   (690 perm/sec)   p_kst 2.932551e-07   p_cons 7.183554e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.078619e-06	k: 0	n:3420000
Cons ci ratio: 1.327275e-03	ci left: 7.178718e-01	ci right 7.188255e-01	k: 2456753	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
ACRC   3420000 perm   4971 sec   (688 perm/sec)   p_kst 2.923977e-07   p_cons 7.183488e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.075474e-06	k: 0	n:3430000
Cons ci ratio: 1.325265e-03	ci left: 7.178951e-01	ci right 7.188474e-01	k: 2464014	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
ACRC   3430000 perm   4998 sec   (686 perm/sec)   p_kst 2.915452e-07   p_cons 7.183714e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.072348e-06	k: 0	n:3440000
Cons ci ratio: 1.323360e-03	ci left: 7.178889e-01	ci right 7.188398e-01	k: 2471174	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
ACRC   3440000 perm   5024 sec   (685 perm/sec)   p_kst 2.906977e-07   p_cons 7.183645e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.069240e-06	k: 0	n:3450000
Cons ci ratio: 1.321432e-03	ci left: 7.178923e-01	ci right 7.188418e-01	k: 2478367	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
ACRC   3450000 perm   5051 sec   (683 perm/sec)   p_kst 2.898551e-07   p_cons 7.183672e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.066150e-06	k: 0	n:3460000
Cons ci ratio: 1.319458e-03	ci left: 7.179122e-01	ci right 7.188603e-01	k: 2485617	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
ACRC   3460000 perm   5078 sec   (681 perm/sec)   p_kst 2.890173e-07   p_cons 7.183864e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.063077e-06	k: 0	n:3470000
Cons ci ratio: 1.317523e-03	ci left: 7.179230e-01	ci right 7.188697e-01	k: 2492836	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
ACRC   3470000 perm   5105 sec   (680 perm/sec)   p_kst 2.881844e-07   p_cons 7.183965e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.060022e-06	k: 0	n:3480000
Cons ci ratio: 1.315636e-03	ci left: 7.179214e-01	ci right 7.188668e-01	k: 2500012	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
ACRC   3480000 perm   5132 sec   (678 perm/sec)   p_kst 2.873563e-07   p_cons 7.183943e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.056985e-06	k: 0	n:3490000
Cons ci ratio: 1.313818e-03	ci left: 7.179011e-01	ci right 7.188452e-01	k: 2507123	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
ACRC   3490000 perm   5159 sec   (676 perm/sec)   p_kst 2.865330e-07   p_cons 7.183734e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.053965e-06	k: 0	n:3500000
Cons ci ratio: 1.311971e-03	ci left: 7.178922e-01	ci right 7.188349e-01	k: 2514273	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
ACRC   3500000 perm   5186 sec   (675 perm/sec)   p_kst 2.857143e-07   p_cons 7.183637e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.050962e-06	k: 0	n:3510000
Cons ci ratio: 1.310077e-03	ci left: 7.179001e-01	ci right 7.188415e-01	k: 2521482	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
ACRC   3510000 perm   5214 sec   (673 perm/sec)   p_kst 2.849003e-07   p_cons 7.183709e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.047977e-06	k: 0	n:3520000
Cons ci ratio: 1.308279e-03	ci left: 7.178809e-01	ci right 7.188210e-01	k: 2528596	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
ACRC   3520000 perm   5242 sec   (671 perm/sec)   p_kst 2.840909e-07   p_cons 7.183511e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.045008e-06	k: 0	n:3530000
Cons ci ratio: 1.306415e-03	ci left: 7.178846e-01	ci right 7.188233e-01	k: 2535790	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
ACRC   3530000 perm   5269 sec   (670 perm/sec)   p_kst 2.832861e-07   p_cons 7.183541e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.042056e-06	k: 0	n:3540000
Cons ci ratio: 1.304539e-03	ci left: 7.178944e-01	ci right 7.188318e-01	k: 2543006	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
ACRC   3540000 perm   5297 sec   (668 perm/sec)   p_kst 2.824859e-07   p_cons 7.183633e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.039120e-06	k: 0	n:3550000
Cons ci ratio: 1.302760e-03	ci left: 7.178763e-01	ci right 7.188124e-01	k: 2550123	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
ACRC   3550000 perm   5324 sec   (667 perm/sec)   p_kst 2.816901e-07   p_cons 7.183445e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.036202e-06	k: 0	n:3560000
Cons ci ratio: 1.300910e-03	ci left: 7.178830e-01	ci right 7.188178e-01	k: 2557328	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
ACRC   3560000 perm   5352 sec   (665 perm/sec)   p_kst 2.808989e-07   p_cons 7.183506e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.033299e-06	k: 0	n:3570000
Cons ci ratio: 1.299141e-03	ci left: 7.178667e-01	ci right 7.188002e-01	k: 2564451	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
ACRC   3570000 perm   5381 sec   (664 perm/sec)   p_kst 2.801120e-07   p_cons 7.183336e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.030413e-06	k: 0	n:3580000
Cons ci ratio: 1.297336e-03	ci left: 7.178642e-01	ci right 7.187964e-01	k: 2571623	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
ACRC   3580000 perm   5409 sec   (662 perm/sec)   p_kst 2.793296e-07   p_cons 7.183304e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.027542e-06	k: 0	n:3590000
Cons ci ratio: 1.295613e-03	ci left: 7.178380e-01	ci right 7.187689e-01	k: 2578710	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
ACRC   3590000 perm   5436 sec   (660 perm/sec)   p_kst 2.785515e-07   p_cons 7.183036e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.024688e-06	k: 0	n:3600000
Cons ci ratio: 1.293758e-03	ci left: 7.178556e-01	ci right 7.187852e-01	k: 2585954	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
ACRC   3600000 perm   5465 sec   (659 perm/sec)   p_kst 2.777778e-07   p_cons 7.183206e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.021850e-06	k: 0	n:3610000
Cons ci ratio: 1.292002e-03	ci left: 7.178448e-01	ci right 7.187731e-01	k: 2593096	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
ACRC   3610000 perm   5493 sec   (657 perm/sec)   p_kst 2.770083e-07   p_cons 7.183091e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.019027e-06	k: 0	n:3620000
Cons ci ratio: 1.290255e-03	ci left: 7.178333e-01	ci right 7.187603e-01	k: 2600235	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
ACRC   3620000 perm   5522 sec   (656 perm/sec)   p_kst 2.762431e-07   p_cons 7.182970e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.016220e-06	k: 0	n:3630000
Cons ci ratio: 1.288473e-03	ci left: 7.178350e-01	ci right 7.187608e-01	k: 2607422	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
ACRC   3630000 perm   5550 sec   (654 perm/sec)   p_kst 2.754821e-07   p_cons 7.182981e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.013428e-06	k: 0	n:3640000
Cons ci ratio: 1.286656e-03	ci left: 7.178499e-01	ci right 7.187744e-01	k: 2614657	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
ACRC   3640000 perm   5578 sec   (653 perm/sec)   p_kst 2.747253e-07   p_cons 7.183124e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.010651e-06	k: 0	n:3650000
Cons ci ratio: 1.284904e-03	ci left: 7.178470e-01	ci right 7.187702e-01	k: 2621827	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
ACRC   3650000 perm   5607 sec   (651 perm/sec)   p_kst 2.739726e-07   p_cons 7.183088e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.007890e-06	k: 0	n:3660000
Cons ci ratio: 1.283149e-03	ci left: 7.178470e-01	ci right 7.187690e-01	k: 2629008	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
ACRC   3660000 perm   5635 sec   (649 perm/sec)   p_kst 2.732240e-07   p_cons 7.183082e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.005144e-06	k: 0	n:3670000
Cons ci ratio: 1.281409e-03	ci left: 7.178449e-01	ci right 7.187656e-01	k: 2636181	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
ACRC   3670000 perm   5664 sec   (648 perm/sec)   p_kst 2.724796e-07   p_cons 7.183054e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.002412e-06	k: 0	n:3680000
Cons ci ratio: 1.279648e-03	ci left: 7.178512e-01	ci right 7.187707e-01	k: 2643385	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
ACRC   3680000 perm   5692 sec   (646 perm/sec)   p_kst 2.717391e-07   p_cons 7.183111e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.996958e-07	k: 0	n:3690000
Cons ci ratio: 1.277973e-03	ci left: 7.178329e-01	ci right 7.187511e-01	k: 2650498	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
ACRC   3690000 perm   5721 sec   (645 perm/sec)   p_kst 2.710027e-07   p_cons 7.182921e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.969940e-07	k: 0	n:3700000
Cons ci ratio: 1.276220e-03	ci left: 7.178413e-01	ci right 7.187583e-01	k: 2657710	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
ACRC   3700000 perm   5750 sec   (643 perm/sec)   p_kst 2.702703e-07   p_cons 7.183000e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.943066e-07	k: 0	n:3710000
Cons ci ratio: 1.274574e-03	ci left: 7.178182e-01	ci right 7.187340e-01	k: 2664805	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
ACRC   3710000 perm   5779 sec   (642 perm/sec)   p_kst 2.695418e-07   p_cons 7.182763e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.916338e-07	k: 0	n:3720000
Cons ci ratio: 1.272869e-03	ci left: 7.178160e-01	ci right 7.187305e-01	k: 2671977	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
ACRC   3720000 perm   5809 sec   (640 perm/sec)   p_kst 2.688172e-07   p_cons 7.182734e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.889752e-07	k: 0	n:3730000
Cons ci ratio: 1.271191e-03	ci left: 7.178070e-01	ci right 7.187203e-01	k: 2679124	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
ACRC   3730000 perm   5838 sec   (639 perm/sec)   p_kst 2.680965e-07   p_cons 7.182638e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.863309e-07	k: 0	n:3740000
Cons ci ratio: 1.269509e-03	ci left: 7.178018e-01	ci right 7.187139e-01	k: 2686285	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
ACRC   3740000 perm   5867 sec   (637 perm/sec)   p_kst 2.673797e-07   p_cons 7.182580e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.837007e-07	k: 0	n:3750000
Cons ci ratio: 1.267870e-03	ci left: 7.177849e-01	ci right 7.186958e-01	k: 2693402	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
ACRC   3750000 perm   5896 sec   (636 perm/sec)   p_kst 2.666667e-07   p_cons 7.182405e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.810845e-07	k: 0	n:3760000
Cons ci ratio: 1.266241e-03	ci left: 7.177668e-01	ci right 7.186765e-01	k: 2700514	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
ACRC   3760000 perm   5926 sec   (635 perm/sec)   p_kst 2.659574e-07   p_cons 7.182218e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.784821e-07	k: 0	n:3770000
Cons ci ratio: 1.264602e-03	ci left: 7.177543e-01	ci right 7.186628e-01	k: 2707647	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
ACRC   3770000 perm   5955 sec   (633 perm/sec)   p_kst 2.652520e-07   p_cons 7.182088e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.758936e-07	k: 0	n:3780000
Cons ci ratio: 1.262971e-03	ci left: 7.177412e-01	ci right 7.186485e-01	k: 2714777	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
ACRC   3780000 perm   5985 sec   (632 perm/sec)   p_kst 2.645503e-07   p_cons 7.181950e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.733186e-07	k: 0	n:3790000
Cons ci ratio: 1.261331e-03	ci left: 7.177331e-01	ci right 7.186392e-01	k: 2721926	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
ACRC   3790000 perm   6015 sec   (630 perm/sec)   p_kst 2.638522e-07   p_cons 7.181863e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.707573e-07	k: 0	n:3800000
Cons ci ratio: 1.259677e-03	ci left: 7.177313e-01	ci right 7.186362e-01	k: 2729099	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
ACRC   3800000 perm   6044 sec   (629 perm/sec)   p_kst 2.631579e-07   p_cons 7.181839e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.682094e-07	k: 0	n:3810000
Cons ci ratio: 1.258037e-03	ci left: 7.177272e-01	ci right 7.186310e-01	k: 2736263	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
ACRC   3810000 perm   6074 sec   (627 perm/sec)   p_kst 2.624672e-07   p_cons 7.181793e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.656748e-07	k: 0	n:3820000
Cons ci ratio: 1.256402e-03	ci left: 7.177239e-01	ci right 7.186265e-01	k: 2743430	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
ACRC   3820000 perm   6103 sec   (626 perm/sec)   p_kst 2.617801e-07   p_cons 7.181754e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.631534e-07	k: 0	n:3830000
Cons ci ratio: 1.254770e-03	ci left: 7.177215e-01	ci right 7.186229e-01	k: 2750600	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
ACRC   3830000 perm   6133 sec   (624 perm/sec)   p_kst 2.610966e-07   p_cons 7.181723e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.606452e-07	k: 0	n:3840000
Cons ci ratio: 1.253156e-03	ci left: 7.177154e-01	ci right 7.186156e-01	k: 2757756	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
ACRC   3840000 perm   6164 sec   (623 perm/sec)   p_kst 2.604167e-07   p_cons 7.181656e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.581500e-07	k: 0	n:3850000
Cons ci ratio: 1.251502e-03	ci left: 7.177241e-01	ci right 7.186231e-01	k: 2764969	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
ACRC   3850000 perm   6194 sec   (622 perm/sec)   p_kst 2.597403e-07   p_cons 7.181738e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.556678e-07	k: 0	n:3860000
Cons ci ratio: 1.249913e-03	ci left: 7.177138e-01	ci right 7.186117e-01	k: 2772109	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
ACRC   3860000 perm   6224 sec   (620 perm/sec)   p_kst 2.590674e-07   p_cons 7.181630e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.531984e-07	k: 0	n:3870000
Cons ci ratio: 1.248230e-03	ci left: 7.177362e-01	ci right 7.186329e-01	k: 2779375	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
ACRC   3870000 perm   6253 sec   (619 perm/sec)   p_kst 2.583979e-07   p_cons 7.181848e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.507417e-07	k: 0	n:3880000
Cons ci ratio: 1.246597e-03	ci left: 7.177446e-01	ci right 7.186401e-01	k: 2786587	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
ACRC   3880000 perm   6283 sec   (618 perm/sec)   p_kst 2.577320e-07   p_cons 7.181925e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.482976e-07	k: 0	n:3890000
Cons ci ratio: 1.245020e-03	ci left: 7.177364e-01	ci right 7.186308e-01	k: 2793735	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
ACRC   3890000 perm   6313 sec   (616 perm/sec)   p_kst 2.570694e-07   p_cons 7.181838e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.458661e-07	k: 0	n:3900000
Cons ci ratio: 1.243410e-03	ci left: 7.177412e-01	ci right 7.186344e-01	k: 2800933	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
ACRC   3900000 perm   6343 sec   (615 perm/sec)   p_kst 2.564103e-07   p_cons 7.181879e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.434470e-07	k: 0	n:3910000
Cons ci ratio: 1.241829e-03	ci left: 7.177387e-01	ci right 7.186308e-01	k: 2808103	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
ACRC   3910000 perm   6373 sec   (614 perm/sec)   p_kst 2.557545e-07   p_cons 7.181849e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.410402e-07	k: 0	n:3920000
Cons ci ratio: 1.240270e-03	ci left: 7.177306e-01	ci right 7.186216e-01	k: 2815251	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
ACRC   3920000 perm   6403 sec   (612 perm/sec)   p_kst 2.551020e-07   p_cons 7.181763e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.386457e-07	k: 0	n:3930000
Cons ci ratio: 1.238680e-03	ci left: 7.177348e-01	ci right 7.186247e-01	k: 2822447	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
ACRC   3930000 perm   6434 sec   (611 perm/sec)   p_kst 2.544529e-07   p_cons 7.181799e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.362634e-07	k: 0	n:3940000
Cons ci ratio: 1.237130e-03	ci left: 7.177278e-01	ci right 7.186165e-01	k: 2829599	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
ACRC   3940000 perm   6465 sec   (609 perm/sec)   p_kst 2.538071e-07   p_cons 7.181723e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.338931e-07	k: 0	n:3950000
Cons ci ratio: 1.235565e-03	ci left: 7.177277e-01	ci right 7.186153e-01	k: 2836778	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
ACRC   3950000 perm   6495 sec   (608 perm/sec)   p_kst 2.531646e-07   p_cons 7.181716e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.315348e-07	k: 0	n:3960000
Cons ci ratio: 1.233894e-03	ci left: 7.177645e-01	ci right 7.186509e-01	k: 2844103	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
ACRC   3960000 perm   6526 sec   (607 perm/sec)   p_kst 2.525253e-07   p_cons 7.182078e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.291883e-07	k: 0	n:3970000
Cons ci ratio: 1.232303e-03	ci left: 7.177768e-01	ci right 7.186621e-01	k: 2851332	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
ACRC   3970000 perm   6558 sec   (605 perm/sec)   p_kst 2.518892e-07   p_cons 7.182196e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.268537e-07	k: 0	n:3980000
Cons ci ratio: 1.230784e-03	ci left: 7.177675e-01	ci right 7.186517e-01	k: 2858475	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
ACRC   3980000 perm   6589 sec   (604 perm/sec)   p_kst 2.512563e-07   p_cons 7.182098e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.245308e-07	k: 0	n:3990000
Cons ci ratio: 1.229257e-03	ci left: 7.177626e-01	ci right 7.186456e-01	k: 2865635	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
ACRC   3990000 perm   6620 sec   (603 perm/sec)   p_kst 2.506266e-07   p_cons 7.182043e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.222194e-07	k: 0	n:4000000
Cons ci ratio: 1.227749e-03	ci left: 7.177533e-01	ci right 7.186353e-01	k: 2872778	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
ACRC   4000000 perm   6651 sec   (601 perm/sec)   p_kst 2.500000e-07   p_cons 7.181945e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.199196e-07	k: 0	n:4010000
Cons ci ratio: 1.226249e-03	ci left: 7.177434e-01	ci right 7.186243e-01	k: 2879918	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
ACRC   4010000 perm   6681 sec   (600 perm/sec)   p_kst 2.493766e-07   p_cons 7.181840e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.176313e-07	k: 0	n:4020000
Cons ci ratio: 1.224728e-03	ci left: 7.177423e-01	ci right 7.186221e-01	k: 2887093	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
ACRC   4020000 perm   6712 sec   (599 perm/sec)   p_kst 2.487562e-07   p_cons 7.181823e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.153543e-07	k: 0	n:4030000
Cons ci ratio: 1.223184e-03	ci left: 7.177508e-01	ci right 7.186295e-01	k: 2894307	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
ACRC   4030000 perm   6743 sec   (598 perm/sec)   p_kst 2.481390e-07   p_cons 7.181903e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.130886e-07	k: 0	n:4040000
Cons ci ratio: 1.221649e-03	ci left: 7.177578e-01	ci right 7.186354e-01	k: 2901515	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
ACRC   4040000 perm   6774 sec   (596 perm/sec)   p_kst 2.475248e-07   p_cons 7.181968e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.108340e-07	k: 0	n:4050000
Cons ci ratio: 1.220173e-03	ci left: 7.177475e-01	ci right 7.186240e-01	k: 2908653	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
ACRC   4050000 perm   6806 sec   (595 perm/sec)   p_kst 2.469136e-07   p_cons 7.181859e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.085906e-07	k: 0	n:4060000
Cons ci ratio: 1.218625e-03	ci left: 7.177629e-01	ci right 7.186383e-01	k: 2915895	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
ACRC   4060000 perm   6837 sec   (594 perm/sec)   p_kst 2.463054e-07   p_cons 7.182007e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.063582e-07	k: 0	n:4070000
Cons ci ratio: 1.217099e-03	ci left: 7.177725e-01	ci right 7.186469e-01	k: 2923114	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
ACRC   4070000 perm   6869 sec   (593 perm/sec)   p_kst 2.457002e-07   p_cons 7.182098e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.041367e-07	k: 0	n:4080000
Cons ci ratio: 1.215588e-03	ci left: 7.177794e-01	ci right 7.186527e-01	k: 2930322	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
ACRC   4080000 perm   6901 sec   (591 perm/sec)   p_kst 2.450980e-07   p_cons 7.182162e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.019261e-07	k: 0	n:4090000
Cons ci ratio: 1.214149e-03	ci left: 7.177640e-01	ci right 7.186362e-01	k: 2937439	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
ACRC   4090000 perm   6933 sec   (590 perm/sec)   p_kst 2.444988e-07   p_cons 7.182002e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.997263e-07	k: 0	n:4100000
Cons ci ratio: 1.212617e-03	ci left: 7.177811e-01	ci right 7.186523e-01	k: 2944689	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
ACRC   4100000 perm   6965 sec   (589 perm/sec)   p_kst 2.439024e-07   p_cons 7.182168e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.975372e-07	k: 0	n:4110000
Cons ci ratio: 1.211136e-03	ci left: 7.177833e-01	ci right 7.186534e-01	k: 2951878	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
ACRC   4110000 perm   6996 sec   (587 perm/sec)   p_kst 2.433090e-07   p_cons 7.182185e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.953587e-07	k: 0	n:4120000
Cons ci ratio: 1.209656e-03	ci left: 7.177872e-01	ci right 7.186562e-01	k: 2959074	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
ACRC   4120000 perm   7028 sec   (586 perm/sec)   p_kst 2.427184e-07   p_cons 7.182218e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.931908e-07	k: 0	n:4130000
Cons ci ratio: 1.208180e-03	ci left: 7.177913e-01	ci right 7.186593e-01	k: 2966271	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
ACRC   4130000 perm   7061 sec   (585 perm/sec)   p_kst 2.421308e-07   p_cons 7.182254e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.910333e-07	k: 0	n:4140000
Cons ci ratio: 1.206684e-03	ci left: 7.178038e-01	ci right 7.186707e-01	k: 2973503	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
ACRC   4140000 perm   7093 sec   (584 perm/sec)   p_kst 2.415459e-07   p_cons 7.182374e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.888862e-07	k: 0	n:4150000
Cons ci ratio: 1.205213e-03	ci left: 7.178098e-01	ci right 7.186757e-01	k: 2980708	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
ACRC   4150000 perm   7126 sec   (582 perm/sec)   p_kst 2.409639e-07   p_cons 7.182429e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.867495e-07	k: 0	n:4160000
Cons ci ratio: 1.203801e-03	ci left: 7.177977e-01	ci right 7.186626e-01	k: 2987838	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
ACRC   4160000 perm   7158 sec   (581 perm/sec)   p_kst 2.403846e-07   p_cons 7.182303e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.846230e-07	k: 0	n:4170000
Cons ci ratio: 1.202361e-03	ci left: 7.177967e-01	ci right 7.186605e-01	k: 2995014	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
ACRC   4170000 perm   7191 sec   (580 perm/sec)   p_kst 2.398082e-07   p_cons 7.182288e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.825067e-07	k: 0	n:4180000
Cons ci ratio: 1.200846e-03	ci left: 7.178228e-01	ci right 7.186855e-01	k: 3002303	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
ACRC   4180000 perm   7224 sec   (579 perm/sec)   p_kst 2.392344e-07   p_cons 7.182543e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.804004e-07	k: 0	n:4190000
Cons ci ratio: 1.199413e-03	ci left: 7.178232e-01	ci right 7.186849e-01	k: 3009485	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
ACRC   4190000 perm   7256 sec   (577 perm/sec)   p_kst 2.386635e-07   p_cons 7.182542e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.783042e-07	k: 0	n:4200000
Cons ci ratio: 1.198011e-03	ci left: 7.178145e-01	ci right 7.186752e-01	k: 3016629	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
ACRC   4200000 perm   7289 sec   (576 perm/sec)   p_kst 2.380952e-07   p_cons 7.182450e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.762180e-07	k: 0	n:4210000
Cons ci ratio: 1.196579e-03	ci left: 7.178180e-01	ci right 7.186777e-01	k: 3023824	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
ACRC   4210000 perm   7322 sec   (575 perm/sec)   p_kst 2.375297e-07   p_cons 7.182480e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.741417e-07	k: 0	n:4220000
Cons ci ratio: 1.195191e-03	ci left: 7.178080e-01	ci right 7.186666e-01	k: 3030962	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
ACRC   4220000 perm   7355 sec   (574 perm/sec)   p_kst 2.369668e-07   p_cons 7.182374e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.720751e-07	k: 0	n:4230000
Cons ci ratio: 1.193804e-03	ci left: 7.177996e-01	ci right 7.186573e-01	k: 3038107	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
ACRC   4230000 perm   7388 sec   (573 perm/sec)   p_kst 2.364066e-07   p_cons 7.182286e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.700184e-07	k: 0	n:4240000
Cons ci ratio: 1.192373e-03	ci left: 7.178076e-01	ci right 7.186642e-01	k: 3045321	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
ACRC   4240000 perm   7420 sec   (571 perm/sec)   p_kst 2.358491e-07   p_cons 7.182361e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.679713e-07	k: 0	n:4250000
Cons ci ratio: 1.191011e-03	ci left: 7.177939e-01	ci right 7.186495e-01	k: 3052443	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
ACRC   4250000 perm   7453 sec   (570 perm/sec)   p_kst 2.352941e-07   p_cons 7.182219e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.659338e-07	k: 0	n:4260000
Cons ci ratio: 1.189651e-03	ci left: 7.177815e-01	ci right 7.186361e-01	k: 3059570	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
ACRC   4260000 perm   7486 sec   (569 perm/sec)   p_kst 2.347418e-07   p_cons 7.182089e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.639058e-07	k: 0	n:4270000
Cons ci ratio: 1.188275e-03	ci left: 7.177756e-01	ci right 7.186292e-01	k: 3066725	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
ACRC   4270000 perm   7519 sec   (568 perm/sec)   p_kst 2.341920e-07   p_cons 7.182026e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.618874e-07	k: 0	n:4280000
Cons ci ratio: 1.186823e-03	ci left: 7.177978e-01	ci right 7.186505e-01	k: 3074000	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
ACRC   4280000 perm   7552 sec   (567 perm/sec)   p_kst 2.336449e-07   p_cons 7.182243e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.598783e-07	k: 0	n:4290000
Cons ci ratio: 1.185465e-03	ci left: 7.177892e-01	ci right 7.186408e-01	k: 3081143	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
ACRC   4290000 perm   7586 sec   (566 perm/sec)   p_kst 2.331002e-07   p_cons 7.182152e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.578786e-07	k: 0	n:4300000
Cons ci ratio: 1.184097e-03	ci left: 7.177859e-01	ci right 7.186366e-01	k: 3088309	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
ACRC   4300000 perm   7619 sec   (564 perm/sec)   p_kst 2.325581e-07   p_cons 7.182114e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.558881e-07	k: 0	n:4310000
Cons ci ratio: 1.182741e-03	ci left: 7.177801e-01	ci right 7.186298e-01	k: 3095464	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
ACRC   4310000 perm   7653 sec   (563 perm/sec)   p_kst 2.320186e-07   p_cons 7.182051e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.539069e-07	k: 0	n:4320000
Cons ci ratio: 1.181369e-03	ci left: 7.177815e-01	ci right 7.186302e-01	k: 3102650	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
ACRC   4320000 perm   7687 sec   (562 perm/sec)   p_kst 2.314815e-07   p_cons 7.182060e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.519348e-07	k: 0	n:4330000
Cons ci ratio: 1.180015e-03	ci left: 7.177783e-01	ci right 7.186260e-01	k: 3109816	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
ACRC   4330000 perm   7720 sec   (561 perm/sec)   p_kst 2.309469e-07   p_cons 7.182023e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.499719e-07	k: 0	n:4340000
Cons ci ratio: 1.178654e-03	ci left: 7.177788e-01	ci right 7.186255e-01	k: 3116998	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
ACRC   4340000 perm   7753 sec   (560 perm/sec)   p_kst 2.304147e-07   p_cons 7.182023e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.480179e-07	k: 0	n:4350000
Cons ci ratio: 1.177277e-03	ci left: 7.177866e-01	ci right 7.186324e-01	k: 3124212	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
ACRC   4350000 perm   7787 sec   (559 perm/sec)   p_kst 2.298851e-07   p_cons 7.182097e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.460729e-07	k: 0	n:4360000
Cons ci ratio: 1.175854e-03	ci left: 7.178121e-01	ci right 7.186569e-01	k: 3131503	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
ACRC   4360000 perm   7821 sec   (557 perm/sec)   p_kst 2.293578e-07   p_cons 7.182346e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.441368e-07	k: 0	n:4370000
Cons ci ratio: 1.174460e-03	ci left: 7.178292e-01	ci right 7.186730e-01	k: 3138758	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
ACRC   4370000 perm   7855 sec   (556 perm/sec)   p_kst 2.288330e-07   p_cons 7.182513e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.422096e-07	k: 0	n:4380000
Cons ci ratio: 1.173158e-03	ci left: 7.178159e-01	ci right 7.186587e-01	k: 3145880	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
ACRC   4380000 perm   7889 sec   (555 perm/sec)   p_kst 2.283105e-07   p_cons 7.182374e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.402911e-07	k: 0	n:4390000
Cons ci ratio: 1.171849e-03	ci left: 7.178067e-01	ci right 7.186486e-01	k: 3153020	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
ACRC   4390000 perm   7923 sec   (554 perm/sec)   p_kst 2.277904e-07   p_cons 7.182278e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.383813e-07	k: 0	n:4400000
Cons ci ratio: 1.170488e-03	ci left: 7.178171e-01	ci right 7.186580e-01	k: 3160246	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
ACRC   4400000 perm   7957 sec   (553 perm/sec)   p_kst 2.272727e-07   p_cons 7.182377e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.364803e-07	k: 0	n:4410000
Cons ci ratio: 1.169151e-03	ci left: 7.178209e-01	ci right 7.186609e-01	k: 3167443	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
ACRC   4410000 perm   7991 sec   (552 perm/sec)   p_kst 2.267574e-07   p_cons 7.182410e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.345878e-07	k: 0	n:4420000
Cons ci ratio: 1.167841e-03	ci left: 7.178166e-01	ci right 7.186556e-01	k: 3174604	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
ACRC   4420000 perm   8026 sec   (551 perm/sec)   p_kst 2.262443e-07   p_cons 7.182362e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.327038e-07	k: 0	n:4430000
Cons ci ratio: 1.166518e-03	ci left: 7.178188e-01	ci right 7.186568e-01	k: 3181794	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
ACRC   4430000 perm   8060 sec   (550 perm/sec)   p_kst 2.257336e-07   p_cons 7.182379e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.308284e-07	k: 0	n:4440000
Cons ci ratio: 1.165266e-03	ci left: 7.177975e-01	ci right 7.186346e-01	k: 3188880	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
ACRC   4440000 perm   8096 sec   (548 perm/sec)   p_kst 2.252252e-07   p_cons 7.182162e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.289613e-07	k: 0	n:4450000
Cons ci ratio: 1.163971e-03	ci left: 7.177928e-01	ci right 7.186290e-01	k: 3196039	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
ACRC   4450000 perm   8130 sec   (547 perm/sec)   p_kst 2.247191e-07   p_cons 7.182110e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.271027e-07	k: 0	n:4460000
Cons ci ratio: 1.162697e-03	ci left: 7.177822e-01	ci right 7.186175e-01	k: 3203172	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
ACRC   4460000 perm   8165 sec   (546 perm/sec)   p_kst 2.242152e-07   p_cons 7.182000e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.252523e-07	k: 0	n:4470000
Cons ci ratio: 1.161423e-03	ci left: 7.177731e-01	ci right 7.186074e-01	k: 3210311	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
ACRC   4470000 perm   8200 sec   (545 perm/sec)   p_kst 2.237136e-07   p_cons 7.181904e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.234103e-07	k: 0	n:4480000
Cons ci ratio: 1.160141e-03	ci left: 7.177684e-01	ci right 7.186018e-01	k: 3217470	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
ACRC   4480000 perm   8234 sec   (544 perm/sec)   p_kst 2.232143e-07   p_cons 7.181853e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.215764e-07	k: 0	n:4490000
Cons ci ratio: 1.158850e-03	ci left: 7.177683e-01	ci right 7.186007e-01	k: 3224649	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
ACRC   4490000 perm   8269 sec   (543 perm/sec)   p_kst 2.227171e-07   p_cons 7.181846e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.197507e-07	k: 0	n:4500000
Cons ci ratio: 1.157542e-03	ci left: 7.177756e-01	ci right 7.186072e-01	k: 3231862	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
ACRC   4500000 perm   8304 sec   (542 perm/sec)   p_kst 2.222222e-07   p_cons 7.181916e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.179330e-07	k: 0	n:4510000
Cons ci ratio: 1.156213e-03	ci left: 7.177917e-01	ci right 7.186223e-01	k: 3239114	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
ACRC   4510000 perm   8338 sec   (541 perm/sec)   p_kst 2.217295e-07   p_cons 7.182071e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.161234e-07	k: 0	n:4520000
Cons ci ratio: 1.154898e-03	ci left: 7.178047e-01	ci right 7.186344e-01	k: 3246353	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
ACRC   4520000 perm   8373 sec   (540 perm/sec)   p_kst 2.212389e-07   p_cons 7.182197e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.143218e-07	k: 0	n:4530000
Cons ci ratio: 1.153590e-03	ci left: 7.178166e-01	ci right 7.186454e-01	k: 3253587	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
ACRC   4530000 perm   8407 sec   (539 perm/sec)   p_kst 2.207506e-07   p_cons 7.182311e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.125282e-07	k: 0	n:4540000
Cons ci ratio: 1.152322e-03	ci left: 7.178159e-01	ci right 7.186437e-01	k: 3260764	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
ACRC   4540000 perm   8442 sec   (538 perm/sec)   p_kst 2.202643e-07   p_cons 7.182300e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.107424e-07	k: 0	n:4550000
Cons ci ratio: 1.151064e-03	ci left: 7.178130e-01	ci right 7.186399e-01	k: 3267931	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
ACRC   4550000 perm   8477 sec   (537 perm/sec)   p_kst 2.197802e-07   p_cons 7.182266e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.089645e-07	k: 0	n:4560000
Cons ci ratio: 1.149817e-03	ci left: 7.178081e-01	ci right 7.186341e-01	k: 3275089	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
ACRC   4560000 perm   8512 sec   (536 perm/sec)   p_kst 2.192982e-07   p_cons 7.182213e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.071943e-07	k: 0	n:4570000
Cons ci ratio: 1.148503e-03	ci left: 7.178280e-01	ci right 7.186531e-01	k: 3282360	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
ACRC   4570000 perm   8547 sec   (535 perm/sec)   p_kst 2.188184e-07   p_cons 7.182407e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.054319e-07	k: 0	n:4580000
Cons ci ratio: 1.147263e-03	ci left: 7.178233e-01	ci right 7.186476e-01	k: 3289519	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
ACRC   4580000 perm   8582 sec   (534 perm/sec)   p_kst 2.183406e-07   p_cons 7.182356e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.036771e-07	k: 0	n:4590000
Cons ci ratio: 1.146005e-03	ci left: 7.178263e-01	ci right 7.186496e-01	k: 3296713	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
ACRC   4590000 perm   8617 sec   (533 perm/sec)   p_kst 2.178649e-07   p_cons 7.182381e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.019300e-07	k: 0	n:4600000
Cons ci ratio: 1.144801e-03	ci left: 7.178117e-01	ci right 7.186341e-01	k: 3303826	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
ACRC   4600000 perm   8653 sec   (532 perm/sec)   p_kst 2.173913e-07   p_cons 7.182230e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.001904e-07	k: 0	n:4610000
Cons ci ratio: 1.143572e-03	ci left: 7.178075e-01	ci right 7.186291e-01	k: 3310987	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
ACRC   4610000 perm   8688 sec   (531 perm/sec)   p_kst 2.169197e-07   p_cons 7.182184e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.984584e-07	k: 0	n:4620000
Cons ci ratio: 1.142338e-03	ci left: 7.178064e-01	ci right 7.186271e-01	k: 3318162	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
ACRC   4620000 perm   8724 sec   (530 perm/sec)   p_kst 2.164502e-07   p_cons 7.182169e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.967339e-07	k: 0	n:4630000
Cons ci ratio: 1.141120e-03	ci left: 7.178010e-01	ci right 7.186208e-01	k: 3325317	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
ACRC   4630000 perm   8759 sec   (529 perm/sec)   p_kst 2.159827e-07   p_cons 7.182110e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.950168e-07	k: 0	n:4640000
Cons ci ratio: 1.139912e-03	ci left: 7.177937e-01	ci right 7.186125e-01	k: 3332463	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
ACRC   4640000 perm   8795 sec   (528 perm/sec)   p_kst 2.155172e-07   p_cons 7.182032e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.933071e-07	k: 0	n:4650000
Cons ci ratio: 1.138703e-03	ci left: 7.177878e-01	ci right 7.186059e-01	k: 3339616	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
ACRC   4650000 perm   8831 sec   (527 perm/sec)   p_kst 2.150538e-07   p_cons 7.181970e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.916047e-07	k: 0	n:4660000
Cons ci ratio: 1.137443e-03	ci left: 7.178016e-01	ci right 7.186187e-01	k: 3346860	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
ACRC   4660000 perm   8867 sec   (526 perm/sec)   p_kst 2.145923e-07   p_cons 7.182103e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.899096e-07	k: 0	n:4670000
Cons ci ratio: 1.136206e-03	ci left: 7.178089e-01	ci right 7.186251e-01	k: 3354074	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
ACRC   4670000 perm   8903 sec   (525 perm/sec)   p_kst 2.141328e-07   p_cons 7.182171e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.882218e-07	k: 0	n:4680000
Cons ci ratio: 1.134933e-03	ci left: 7.178300e-01	ci right 7.186454e-01	k: 3361353	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
ACRC   4680000 perm   8939 sec   (524 perm/sec)   p_kst 2.136752e-07   p_cons 7.182378e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.865412e-07	k: 0	n:4690000
Cons ci ratio: 1.133708e-03	ci left: 7.178357e-01	ci right 7.186502e-01	k: 3368560	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
ACRC   4690000 perm   8975 sec   (523 perm/sec)   p_kst 2.132196e-07   p_cons 7.182431e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.848677e-07	k: 0	n:4700000
Cons ci ratio: 1.132501e-03	ci left: 7.178363e-01	ci right 7.186499e-01	k: 3375743	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
ACRC   4700000 perm   9012 sec   (522 perm/sec)   p_kst 2.127660e-07   p_cons 7.182432e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.832013e-07	k: 0	n:4710000
Cons ci ratio: 1.131299e-03	ci left: 7.178364e-01	ci right 7.186491e-01	k: 3382924	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
ACRC   4710000 perm   9049 sec   (520 perm/sec)   p_kst 2.123142e-07   p_cons 7.182429e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.815419e-07	k: 0	n:4720000
Cons ci ratio: 1.130119e-03	ci left: 7.178299e-01	ci right 7.186418e-01	k: 3390074	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
ACRC   4720000 perm   9086 sec   (519 perm/sec)   p_kst 2.118644e-07   p_cons 7.182360e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.798896e-07	k: 0	n:4730000
Cons ci ratio: 1.128888e-03	ci left: 7.178432e-01	ci right 7.186542e-01	k: 3397317	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
ACRC   4730000 perm   9122 sec   (519 perm/sec)   p_kst 2.114165e-07   p_cons 7.182488e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.782443e-07	k: 0	n:4740000
Cons ci ratio: 1.127670e-03	ci left: 7.178530e-01	ci right 7.186632e-01	k: 3404544	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
ACRC   4740000 perm   9158 sec   (518 perm/sec)   p_kst 2.109705e-07   p_cons 7.182582e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.766059e-07	k: 0	n:4750000
Cons ci ratio: 1.126465e-03	ci left: 7.178596e-01	ci right 7.186689e-01	k: 3411756	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
ACRC   4750000 perm   9195 sec   (517 perm/sec)   p_kst 2.105263e-07   p_cons 7.182644e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.749744e-07	k: 0	n:4760000
Cons ci ratio: 1.125326e-03	ci left: 7.178442e-01	ci right 7.186526e-01	k: 3418863	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
ACRC   4760000 perm   9232 sec   (516 perm/sec)   p_kst 2.100840e-07   p_cons 7.182485e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.733497e-07	k: 0	n:4770000
Cons ci ratio: 1.124130e-03	ci left: 7.178504e-01	ci right 7.186580e-01	k: 3426073	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
ACRC   4770000 perm   9269 sec   (515 perm/sec)   p_kst 2.096436e-07   p_cons 7.182543e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.717318e-07	k: 0	n:4780000
Cons ci ratio: 1.122974e-03	ci left: 7.178431e-01	ci right 7.186499e-01	k: 3433219	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
ACRC   4780000 perm   9305 sec   (514 perm/sec)   p_kst 2.092050e-07   p_cons 7.182467e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.701207e-07	k: 0	n:4790000
Cons ci ratio: 1.121767e-03	ci left: 7.178560e-01	ci right 7.186619e-01	k: 3440461	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
ACRC   4790000 perm   9345 sec   (513 perm/sec)   p_kst 2.087683e-07   p_cons 7.182591e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.685163e-07	k: 0	n:4800000
Cons ci ratio: 1.120612e-03	ci left: 7.178515e-01	ci right 7.186566e-01	k: 3447620	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
ACRC   4800000 perm   9383 sec   (512 perm/sec)   p_kst 2.083333e-07   p_cons 7.182542e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.669185e-07	k: 0	n:4810000
Cons ci ratio: 1.119406e-03	ci left: 7.178666e-01	ci right 7.186708e-01	k: 3454873	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
ACRC   4810000 perm   9422 sec   (511 perm/sec)   p_kst 2.079002e-07   p_cons 7.182688e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.653274e-07	k: 0	n:4820000
Cons ci ratio: 1.118230e-03	ci left: 7.178720e-01	ci right 7.186754e-01	k: 3462080	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
ACRC   4820000 perm   9460 sec   (510 perm/sec)   p_kst 2.074689e-07   p_cons 7.182739e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.637429e-07	k: 0	n:4830000
Cons ci ratio: 1.117087e-03	ci left: 7.178667e-01	ci right 7.186693e-01	k: 3469235	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
ACRC   4830000 perm   9498 sec   (509 perm/sec)   p_kst 2.070393e-07   p_cons 7.182681e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.621649e-07	k: 0	n:4840000
Cons ci ratio: 1.115957e-03	ci left: 7.178585e-01	ci right 7.186602e-01	k: 3476376	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
ACRC   4840000 perm   9536 sec   (508 perm/sec)   p_kst 2.066116e-07   p_cons 7.182595e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.605934e-07	k: 0	n:4850000
Cons ci ratio: 1.114870e-03	ci left: 7.178355e-01	ci right 7.186364e-01	k: 3483445	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
ACRC   4850000 perm   9575 sec   (507 perm/sec)   p_kst 2.061856e-07   p_cons 7.182361e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.590284e-07	k: 0	n:4860000
Cons ci ratio: 1.113689e-03	ci left: 7.178482e-01	ci right 7.186483e-01	k: 3490687	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
ACRC   4860000 perm   9612 sec   (506 perm/sec)   p_kst 2.057613e-07   p_cons 7.182484e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.574698e-07	k: 0	n:4870000
Cons ci ratio: 1.112534e-03	ci left: 7.178524e-01	ci right 7.186517e-01	k: 3497888	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
ACRC   4870000 perm   9651 sec   (505 perm/sec)   p_kst 2.053388e-07   p_cons 7.182522e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.559176e-07	k: 0	n:4880000
Cons ci ratio: 1.111384e-03	ci left: 7.178564e-01	ci right 7.186548e-01	k: 3505088	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
ACRC   4880000 perm   9689 sec   (504 perm/sec)   p_kst 2.049180e-07   p_cons 7.182557e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.543718e-07	k: 0	n:4890000
Cons ci ratio: 1.110203e-03	ci left: 7.178728e-01	ci right 7.186705e-01	k: 3512349	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
ACRC   4890000 perm   9727 sec   (503 perm/sec)   p_kst 2.044990e-07   p_cons 7.182718e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.528323e-07	k: 0	n:4900000
Cons ci ratio: 1.109090e-03	ci left: 7.178658e-01	ci right 7.186626e-01	k: 3519495	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
ACRC   4900000 perm   9766 sec   (502 perm/sec)   p_kst 2.040816e-07   p_cons 7.182643e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.512990e-07	k: 0	n:4910000
Cons ci ratio: 1.107943e-03	ci left: 7.178723e-01	ci right 7.186683e-01	k: 3526708	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
ACRC   4910000 perm   9805 sec   (501 perm/sec)   p_kst 2.036660e-07   p_cons 7.182705e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.497720e-07	k: 0	n:4920000
Cons ci ratio: 1.106806e-03	ci left: 7.178765e-01	ci right 7.186716e-01	k: 3533909	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
ACRC   4920000 perm   9845 sec   (500 perm/sec)   p_kst 2.032520e-07   p_cons 7.182742e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.482511e-07	k: 0	n:4930000
Cons ci ratio: 1.105692e-03	ci left: 7.178737e-01	ci right 7.186681e-01	k: 3541076	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
ACRC   4930000 perm   9884 sec   (499 perm/sec)   p_kst 2.028398e-07   p_cons 7.182710e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.467365e-07	k: 0	n:4940000
Cons ci ratio: 1.104546e-03	ci left: 7.178837e-01	ci right 7.186772e-01	k: 3548306	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
ACRC   4940000 perm   9923 sec   (498 perm/sec)   p_kst 2.024291e-07   p_cons 7.182806e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.452279e-07	k: 0	n:4950000
Cons ci ratio: 1.103438e-03	ci left: 7.178813e-01	ci right 7.186740e-01	k: 3555475	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
ACRC   4950000 perm   9963 sec   (497 perm/sec)   p_kst 2.020202e-07   p_cons 7.182778e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.437254e-07	k: 0	n:4960000
Cons ci ratio: 1.102291e-03	ci left: 7.178940e-01	ci right 7.186860e-01	k: 3562719	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
ACRC   4960000 perm   10002 sec   (496 perm/sec)   p_kst 2.016129e-07   p_cons 7.182901e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.422290e-07	k: 0	n:4970000
Cons ci ratio: 1.101221e-03	ci left: 7.178797e-01	ci right 7.186709e-01	k: 3569829	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
ACRC   4970000 perm   10042 sec   (495 perm/sec)   p_kst 2.012072e-07   p_cons 7.182755e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.407386e-07	k: 0	n:4980000
Cons ci ratio: 1.100161e-03	ci left: 7.178633e-01	ci right 7.186537e-01	k: 3576928	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
ACRC   4980000 perm   10081 sec   (494 perm/sec)   p_kst 2.008032e-07   p_cons 7.182586e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.392541e-07	k: 0	n:4990000
Cons ci ratio: 1.099063e-03	ci left: 7.178620e-01	ci right 7.186516e-01	k: 3584102	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
ACRC   4990000 perm   10120 sec   (493 perm/sec)   p_kst 2.004008e-07   p_cons 7.182569e-01   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.377756e-07	k: 0	n:5000000
Cons ci ratio: 1.097964e-03	ci left: 7.178621e-01	ci right 7.186509e-01	k: 3591283	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
ACRC   5000000 perm   10160 sec   (492 perm/sec)   p_kst 2.000000e-07   p_cons 7.182566e-01   p_joint 0

Outputting figure to mutsig2_images.part000000000002/ACRC.4_2124_5000000_2e-07_0.71826_0.png
                gene_name: ACRC
               theta_stop: 3.9 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.72 
     ci_cons_bounds_right: 0.72 
                  p_joint: 0 
     ci_joint_bounds_left: 0 
    ci_joint_bounds_right: 7.38e-07 

Current progress: 20 percent done.
ACD
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.001251e-01	ci left: 1.262063e-01	ci right 1.396083e-01	k: 1328	n:10000
Cons ci ratio: 8.682941e-02	ci left: 1.618987e-01	ci right 1.766945e-01	k: 1692	n:10000
KS ci ratio: 1.087943e-01	ci left: 1.086148e-01	ci right 1.212105e-01	k: 1148	n:10000
ACD   10000 perm   2 sec   (6257 perm/sec)   p_kst 1.148000e-01   p_cons 1.692000e-01   p_joint 1.328000e-01

Joint ci ratio: 1.004917e-01	ci left: 6.713637e-02	ci right 7.428904e-02	k: 1413	n:20000
Cons ci ratio: 6.173909e-02	ci left: 1.625458e-01	ci right 1.729509e-01	k: 3354	n:20000
KS ci ratio: 7.842279e-02	ci left: 1.066782e-01	ci right 1.154352e-01	k: 2220	n:20000
ACD   20000 perm   4 sec   (5579 perm/sec)   p_kst 1.110000e-01   p_cons 1.677000e-01   p_joint 7.065000e-02

Joint ci ratio: 6.097978e-02	ci left: 1.173626e-01	ci right 1.247776e-01	k: 3631	n:30000
Cons ci ratio: 4.791588e-02	ci left: 1.780113e-01	ci right 1.867836e-01	k: 5471	n:30000
KS ci ratio: 6.421136e-02	ci left: 1.069407e-01	ci right 1.140683e-01	k: 3314	n:30000
ACD   30000 perm   6 sec   (5293 perm/sec)   p_kst 1.104667e-01   p_cons 1.823667e-01   p_joint 1.210333e-01

Outputting figure to mutsig2_images.part000000000002/ACD.3_1683_30000_0.11047_0.18237_0.12103.png
                gene_name: ACD
               theta_stop: 0.064 
                    nperm: 30000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.12 
     ci_joint_bounds_left: 0.12 
    ci_joint_bounds_right: 0.12 

Current progress: 40 percent done.
ABP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.463565e-03	ci left: 9.613148e-01	ci right 9.686110e-01	k: 9651	n:10000
Cons ci ratio: 2.995464e-02	ci left: 6.217570e-01	ci right 6.407665e-01	k: 6313	n:10000
KS ci ratio: 1.376352e-02	ci left: 8.840108e-01	ci right 8.963609e-01	k: 8903	n:10000
ABP1   10000 perm   2 sec   (6112 perm/sec)   p_kst 8.903000e-01   p_cons 6.313000e-01   p_joint 9.651000e-01

Outputting figure to mutsig2_images.part000000000002/ABP1.2_2272_10000_0.8903_0.6313_0.9651.png
                gene_name: ABP1
               theta_stop: 0.030 
                    nperm: 10000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.63 
      ci_cons_bounds_left: 0.62 
     ci_cons_bounds_right: 0.64 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.96 
    ci_joint_bounds_right: 0.97 

Current progress: 60 percent done.
ACAD10
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.053366e-02	ci left: 4.733618e-01	ci right 4.930480e-01	k: 4832	n:10000
Cons ci ratio: 5.019975e-02	ci left: 3.691794e-01	ci right 3.882913e-01	k: 3787	n:10000
KS ci ratio: 7.614384e-02	ci left: 2.014608e-01	ci right 2.175088e-01	k: 2094	n:10000
ACAD10   10000 perm   2 sec   (5695 perm/sec)   p_kst 2.094000e-01   p_cons 3.787000e-01   p_joint 4.832000e-01

Outputting figure to mutsig2_images.part000000000002/ACAD10.2_3357_10000_0.2094_0.3787_0.4832.png
                gene_name: ACAD10
               theta_stop: 0.076 
                    nperm: 10000 
                     p_ks: 0.21 
        ci_ks_bounds_left: 0.20 
       ci_ks_bounds_right: 0.22 
                   p_cons: 0.38 
      ci_cons_bounds_left: 0.37 
     ci_cons_bounds_right: 0.39 
                  p_joint: 0.48 
     ci_joint_bounds_left: 0.47 
    ci_joint_bounds_right: 0.49 

Current progress: 80 percent done.
ACBD5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.532262e-02	ci left: 8.606980e-01	ci right 8.740872e-01	k: 8675	n:10000
Cons ci ratio: 1.053044e-01	ci left: 1.152552e-01	ci right 1.281660e-01	k: 1216	n:10000
KS ci ratio: 6.929979e-02	ci left: 2.339280e-01	ci right 2.508223e-01	k: 2423	n:10000
ACBD5   10000 perm   2 sec   (6431 perm/sec)   p_kst 2.423000e-01   p_cons 1.216000e-01   p_joint 8.675000e-01

Joint ci ratio: 4.840327e-02	ci left: 2.409360e-01	ci right 2.529377e-01	k: 4938	n:20000
Cons ci ratio: 7.563504e-02	ci left: 1.139039e-01	ci right 1.229073e-01	k: 2367	n:20000
KS ci ratio: 4.879688e-02	ci left: 2.379610e-01	ci right 2.499135e-01	k: 4878	n:20000
ACBD5   20000 perm   4 sec   (5690 perm/sec)   p_kst 2.439000e-01   p_cons 1.183500e-01   p_joint 2.469000e-01

Outputting figure to mutsig2_images.part000000000002/ACBD5.2_1630_20000_0.2439_0.11835_0.2469.png
                gene_name: ACBD5
               theta_stop: 0.076 
                    nperm: 20000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.24 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.12 
      ci_cons_bounds_left: 0.11 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.25 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000002
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 2 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1725>
Subject: Job 8704097: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1725>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000003> was used as the working directory.
Started at Thu Nov 15 19:31:11 2012
Results reported at Thu Nov 15 19:33:27 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000003.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000003.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 3  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000003.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    115.23 sec.
    Max Memory :      6035 MB
    Max Swap   :      8542 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
3
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 3
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 3: processing genes 182 - 271
Calculating significance of each gene.
Using projection method.
182	ACSM1	1
183	ACSM2A	2.212040e-01
184	ACSM2B	7.236472e-02
185	ACSM3	1
186	ACSM4	1
187	ACSM5	2.472477e-01
188	ACSS1	1
189	ACSS2	1
190	ACSS3	1
191	ACTA1	2.123625e-01
192	ACTA2	1
193	ACTB	1.723190e-01
194	ACTBL2	1
195	ACTC1	1
196	ACTG1	1
197	ACTG2	1
198	ACTL6A	1
199	ACTL6B	1
200	ACTL7A	1
201	ACTL7B	1
202	ACTL8	1
203	ACTL9	1
204	ACTN1	1
205	ACTN2	1
206	ACTN3	1
207	ACTN4	1
208	ACTR10	1
209	ACTR1A	1
210	ACTR1B	1
211	ACTR2	1
212	ACTR3	1
213	ACTR3B	1
214	ACTR3C	1
215	ACTR5	1
216	ACTR6	1
217	ACTR8	1
218	ACTRT1	1
219	ACTRT2	1
220	ACVR1	1
221	ACVR1B	1
222	ACVR1C	1
223	ACVR2A	1.528286e-01
224	ACVR2B	1.687853e-01
225	ACVRL1	1
226	ACY1	4.756130e-02
227	ACY3	1
228	ACYP1	1
229	ACYP2	1
230	ADA	1
231	ADAD1	1
232	ADAD2	1
233	ADAL	1
234	ADAM10	1
235	ADAM11	1
236	ADAM12	9.867715e-02
237	ADAM15	6.418615e-02
238	ADAM17	1
239	ADAM18	1
240	ADAM19	1
241	ADAM2	1
242	ADAM20	1
243	ADAM21	1
244	ADAM22	1
245	ADAM23	1
246	ADAM28	1
247	ADAM29	1
248	ADAM30	2.762063e-01
249	ADAM32	1
250	ADAM33	1.100645e-01
251	ADAM7	1
252	ADAM8	4.386606e-02
In gene ADAM9 the following bins exceed PROBCAP:
    THCA-BJ-A190-TP	categ 6	N = 2505    n = 1	mu =   1.71e-07
253	ADAM9	2.183917e-01
254	ADAMDEC1	1.114740e-01
255	ADAMTS1	1
256	ADAMTS10	1
257	ADAMTS12	2.808516e-01
258	ADAMTS13	1
259	ADAMTS14	1
260	ADAMTS15	2.774358e-01
261	ADAMTS16	2.975732e-01
262	ADAMTS17	1
263	ADAMTS18	9.308257e-03
264	ADAMTS19	5.893210e-02
265	ADAMTS2	2.813140e-03
266	ADAMTS20	4.971652e-01
267	ADAMTS3	6.539161e-02
268	ADAMTS4	1
269	ADAMTS5	1
270	ADAMTS6	2.276300e-01
271	ADAMTS7	1.606816e-01
Done

Running MutSig 2:
Scatter job 3: processing genes 182 - 271
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ADAMTS2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.845350e-02	ci left: 6.454882e-01	ci right 6.642215e-01	k: 6549	n:10000
KS ci ratio: 4.599094e-02	ci left: 4.109985e-01	ci right 4.304477e-01	k: 4207	n:10000
ADAMTS2   10000 perm   2 sec   (5175 perm/sec)   p_kst 4.207000e-01   p_cons 6.549000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000003/ADAMTS2.4_3799_10000_0.4207_0.6549_1.png
                gene_name: ADAMTS2
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.42 
        ci_ks_bounds_left: 0.41 
       ci_ks_bounds_right: 0.43 
                   p_cons: 0.65 
      ci_cons_bounds_left: 0.65 
     ci_cons_bounds_right: 0.66 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 17 percent done.
ADAMTS18
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.112090e-02	ci left: 2.246444e-01	ci right 2.413115e-01	k: 2329	n:10000
Cons ci ratio: 2.485100e-02	ci left: 7.043254e-01	ci right 7.221502e-01	k: 7133	n:10000
KS ci ratio: 9.973603e-02	ci left: 1.270870e-01	ci right 1.405271e-01	k: 1337	n:10000
ADAMTS18   10000 perm   2 sec   (5259 perm/sec)   p_kst 1.337000e-01   p_cons 7.133000e-01   p_joint 2.329000e-01

Outputting figure to mutsig2_images.part000000000003/ADAMTS18.3_3758_10000_0.1337_0.7133_0.2329.png
                gene_name: ADAMTS18
               theta_stop: 0.100 
                    nperm: 10000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.13 
       ci_ks_bounds_right: 0.14 
                   p_cons: 0.71 
      ci_cons_bounds_left: 0.70 
     ci_cons_bounds_right: 0.72 
                  p_joint: 0.23 
     ci_joint_bounds_left: 0.22 
    ci_joint_bounds_right: 0.24 

Current progress: 33 percent done.
ADAM15
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.750450e-02	ci left: 3.953575e-01	ci right 4.146978e-01	k: 4050	n:10000
Cons ci ratio: 5.180519e-02	ci left: 3.545604e-01	ci right 3.735189e-01	k: 3640	n:10000
KS ci ratio: 7.521376e-02	ci left: 2.055028e-01	ci right 2.216644e-01	k: 2135	n:10000
ADAM15   10000 perm   1 sec   (6855 perm/sec)   p_kst 2.135000e-01   p_cons 3.640000e-01   p_joint 4.050000e-01

Outputting figure to mutsig2_images.part000000000003/ADAM15.2_2684_10000_0.2135_0.364_0.405.png
                gene_name: ADAM15
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.21 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.22 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.41 
     ci_joint_bounds_left: 0.40 
    ci_joint_bounds_right: 0.41 

Current progress: 50 percent done.
ADAMTS19
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.791418e-02	ci left: 6.541423e-01	ci right 6.727624e-01	k: 6635	n:10000
Cons ci ratio: 2.425064e-02	ci left: 7.143166e-01	ci right 7.319532e-01	k: 7232	n:10000
KS ci ratio: 7.997575e-02	ci left: 1.858959e-01	ci right 2.014830e-01	k: 1936	n:10000
ADAMTS19   10000 perm   2 sec   (6472 perm/sec)   p_kst 1.936000e-01   p_cons 7.232000e-01   p_joint 6.635000e-01

Outputting figure to mutsig2_images.part000000000003/ADAMTS19.2_3716_10000_0.1936_0.7232_0.6635.png
                gene_name: ADAMTS19
               theta_stop: 0.080 
                    nperm: 10000 
                     p_ks: 0.19 
        ci_ks_bounds_left: 0.19 
       ci_ks_bounds_right: 0.20 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.66 
     ci_joint_bounds_left: 0.65 
    ci_joint_bounds_right: 0.67 

Current progress: 67 percent done.
ADAMTS3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.184739e-03	ci left: 9.725959e-01	ci right 9.787227e-01	k: 9758	n:10000
KS ci ratio: 3.981027e-02	ci left: 4.823548e-01	ci right 5.020497e-01	k: 4922	n:10000
ADAMTS3   10000 perm   2 sec   (6453 perm/sec)   p_kst 4.922000e-01   p_cons 9.758000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000003/ADAMTS3.2_3706_10000_0.4922_0.9758_1.png
                gene_name: ADAMTS3
               theta_stop: 0.040 
                    nperm: 10000 
                     p_ks: 0.49 
        ci_ks_bounds_left: 0.48 
       ci_ks_bounds_right: 0.50 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
ADAMTS7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.522805e-02	ci left: 6.980709e-01	ci right 7.160083e-01	k: 7071	n:10000
Cons ci ratio: 6.597726e-02	ci left: 2.522150e-01	ci right 2.695245e-01	k: 2608	n:10000
KS ci ratio: 3.282282e-02	ci left: 5.780780e-01	ci right 5.974708e-01	k: 5878	n:10000
ADAMTS7   10000 perm   2 sec   (5864 perm/sec)   p_kst 5.878000e-01   p_cons 2.608000e-01   p_joint 7.071000e-01

Outputting figure to mutsig2_images.part000000000003/ADAMTS7.2_5157_10000_0.5878_0.2608_0.7071.png
                gene_name: ADAMTS7
               theta_stop: 0.066 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.26 
      ci_cons_bounds_left: 0.25 
     ci_cons_bounds_right: 0.27 
                  p_joint: 0.71 
     ci_joint_bounds_left: 0.70 
    ci_joint_bounds_right: 0.72 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000003
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 3 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1724>
Subject: Job 8704098: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1724>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000004> was used as the working directory.
Started at Thu Nov 15 19:31:11 2012
Results reported at Thu Nov 15 19:33:10 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000004.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000004.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 4  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000004.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    109.63 sec.
    Max Memory :      5699 MB
    Max Swap   :      8462 MB

    Max Processes  :         7
    Max Threads    :        67

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
4
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 4
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 4: processing genes 272 - 362
Calculating significance of each gene.
Using projection method.
272	ADAMTS8	8.672322e-02
273	ADAMTS9	5.553257e-01
274	ADAMTSL1	1
275	ADAMTSL2	1
276	ADAMTSL3	5.464566e-01
277	ADAMTSL4	4.386226e-01
278	ADAMTSL5	1
279	ADAP1	1
280	ADAP2	1
281	ADAR	1.524042e-01
282	ADARB1	1.609168e-01
283	ADARB2	2.712482e-01
284	ADAT1	6.741680e-02
285	ADAT2	1
286	ADAT3	1
287	ADC	2.026211e-01
288	ADCK1	2.309611e-01
289	ADCK2	1
290	ADCK4	1
291	ADCK5	1
292	ADCY1	1
293	ADCY10	3.157683e-01
294	ADCY2	1
295	ADCY3	2.429069e-01
296	ADCY4	1
297	ADCY5	1
298	ADCY6	1
299	ADCY7	2.135954e-01
300	ADCY8	2.223310e-01
301	ADCY9	1.539404e-02
302	ADCYAP1	1
303	ADCYAP1R1	9.836015e-02
304	ADD1	1
305	ADD2	1
306	ADD3	1
307	ADH1A	1
308	ADH1B	1
309	ADH1C	1
310	ADH4	4.028439e-02
311	ADH5	1
312	ADH6	1
313	ADH7	2.033442e-03
314	ADHFE1	1
315	ADI1	1
316	ADIG	1
317	ADIPOQ	1
318	ADIPOR1	1
319	ADIPOR2	1
320	ADK	1
321	ADM	5.227110e-02
322	ADM2	1
323	ADNP	1
324	ADNP2	1
325	ADO	1.965870e-02
326	ADORA1	1
327	ADORA2A	1
328	ADORA2B	1
329	ADORA3	1
330	ADPGK	1
331	ADPRH	1
332	ADPRHL1	1
333	ADPRHL2	1
334	ADRA1A	2.056966e-01
335	ADRA1B	1
336	ADRA1D	1
337	ADRA2A	1
338	ADRA2B	1
339	ADRA2C	1
340	ADRB1	1.566951e-01
341	ADRB2	1
342	ADRB3	1
343	ADRBK1	1
344	ADRBK2	1
345	ADRM1	1
346	ADSL	1
347	ADSS	1
348	ADSSL1	1
349	AEBP1	1
350	AEBP2	1
351	AEN	1
352	AES	1
353	AFAP1	1
354	AFAP1L1	1
355	AFAP1L2	1
356	AFF1	4.105847e-01
357	AFF2	1
358	AFF3	1
359	AFF4	1
360	AFG3L2	1
361	AFM	1.029286e-01
362	AFMID	1
Done

Running MutSig 2:
Scatter job 4: processing genes 272 - 362
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ADCY9
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.510420e-01	ci left: 2.080800e-02	ci right 2.687375e-02	k: 237	n:10000
Cons ci ratio: 9.461386e-02	ci left: 1.395251e-01	ci right 1.534815e-01	k: 1464	n:10000
KS ci ratio: 2.428074e-01	ci left: 2.231105e-02	ci right 2.856957e-02	k: 253	n:10000
ADCY9   10000 perm   2 sec   (6137 perm/sec)   p_kst 2.530000e-02   p_cons 1.464000e-01   p_joint 2.370000e-02

Joint ci ratio: 1.144539e-01	ci left: 5.222078e-02	ci right 5.860924e-02	k: 1107	n:20000
Cons ci ratio: 6.747077e-02	ci left: 1.395063e-01	ci right 1.492974e-01	k: 2887	n:20000
KS ci ratio: 1.723925e-01	ci left: 2.302419e-02	ci right 2.741533e-02	k: 503	n:20000
ADCY9   20000 perm   5 sec   (3672 perm/sec)   p_kst 2.515000e-02   p_cons 1.443500e-01   p_joint 5.535000e-02

Joint ci ratio: 9.265777e-02	ci left: 5.368549e-02	ci right 5.893419e-02	k: 1688	n:30000
Cons ci ratio: 5.545705e-02	ci left: 1.387931e-01	ci right 1.467429e-01	k: 4282	n:30000
KS ci ratio: 1.450478e-01	ci left: 2.204044e-02	ci right 2.551929e-02	k: 712	n:30000
ADCY9   30000 perm   7 sec   (4004 perm/sec)   p_kst 2.373333e-02   p_cons 1.427333e-01   p_joint 5.626667e-02

Joint ci ratio: 1.047114e-01	ci left: 3.207481e-02	ci right 3.564328e-02	k: 1353	n:40000
Cons ci ratio: 4.807974e-02	ci left: 1.390631e-01	ci right 1.459388e-01	k: 5699	n:40000
KS ci ratio: 1.256607e-01	ci left: 2.225571e-02	ci right 2.526398e-02	k: 949	n:40000
ADCY9   40000 perm   10 sec   (4173 perm/sec)   p_kst 2.372500e-02   p_cons 1.424750e-01   p_joint 3.382500e-02

Joint ci ratio: 1.026489e-01	ci left: 2.688341e-02	ci right 2.981169e-02	k: 1416	n:50000
Cons ci ratio: 4.291963e-02	ci left: 1.399027e-01	ci right 1.460588e-01	k: 7148	n:50000
KS ci ratio: 1.135509e-01	ci left: 2.195657e-02	ci right 2.461918e-02	k: 1163	n:50000
ADCY9   50000 perm   12 sec   (4251 perm/sec)   p_kst 2.326000e-02   p_cons 1.429600e-01   p_joint 2.832000e-02

Joint ci ratio: 1.245802e-01	ci left: 1.522113e-02	ci right 1.725939e-02	k: 973	n:60000
Cons ci ratio: 3.923297e-02	ci left: 1.398442e-01	ci right 1.454571e-01	k: 8558	n:60000
KS ci ratio: 1.042628e-01	ci left: 2.181533e-02	ci right 2.423111e-02	k: 1380	n:60000
ADCY9   60000 perm   14 sec   (4280 perm/sec)   p_kst 2.300000e-02   p_cons 1.426333e-01   p_joint 1.621667e-02

Joint ci ratio: 9.058107e-02	ci left: 2.487558e-02	ci right 2.724964e-02	k: 1823	n:70000
Cons ci ratio: 3.649017e-02	ci left: 1.389400e-01	ci right 1.441183e-01	k: 9906	n:70000
KS ci ratio: 9.604674e-02	ci left: 2.212537e-02	ci right 2.437153e-02	k: 1626	n:70000
ADCY9   70000 perm   16 sec   (4286 perm/sec)   p_kst 2.322857e-02   p_cons 1.415143e-01   p_joint 2.604286e-02

Outputting figure to mutsig2_images.part000000000004/ADCY9.3_4102_70000_0.023229_0.14151_0.026043.png
                gene_name: ADCY9
               theta_stop: 0.096 
                    nperm: 70000 
                     p_ks: 0.023 
        ci_ks_bounds_left: 0.022 
       ci_ks_bounds_right: 0.024 
                   p_cons: 0.14 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.14 
                  p_joint: 0.026 
     ci_joint_bounds_left: 0.025 
    ci_joint_bounds_right: 0.027 

Current progress: 50 percent done.
ADH7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.059909e-02	ci left: 2.859734e-01	ci right 3.039462e-01	k: 2949	n:10000
Cons ci ratio: 1.034734e-01	ci left: 1.189689e-01	ci right 1.320501e-01	k: 1254	n:10000
KS ci ratio: 2.294549e-02	ci left: 7.361346e-01	ci right 7.533227e-01	k: 7448	n:10000
ADH7   10000 perm   1 sec   (7436 perm/sec)   p_kst 7.448000e-01   p_cons 1.254000e-01   p_joint 2.949000e-01

Joint ci ratio: 6.232029e-02	ci left: 1.599785e-01	ci right 1.703191e-01	k: 3302	n:20000
Cons ci ratio: 7.380830e-02	ci left: 1.190194e-01	ci right 1.281903e-01	k: 2471	n:20000
KS ci ratio: 1.638513e-02	ci left: 7.349192e-01	ci right 7.471107e-01	k: 14821	n:20000
ADH7   20000 perm   3 sec   (6565 perm/sec)   p_kst 7.410500e-01   p_cons 1.235500e-01   p_joint 1.651000e-01

Outputting figure to mutsig2_images.part000000000004/ADH7.2_1279_20000_0.74105_0.12355_0.1651.png
                gene_name: ADH7
               theta_stop: 0.074 
                    nperm: 20000 
                     p_ks: 0.74 
        ci_ks_bounds_left: 0.73 
       ci_ks_bounds_right: 0.75 
                   p_cons: 0.12 
      ci_cons_bounds_left: 0.12 
     ci_cons_bounds_right: 0.13 
                  p_joint: 0.17 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.17 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000004
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 4 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1730>
Subject: Job 8704100: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1730>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000005> was used as the working directory.
Started at Thu Nov 15 19:31:11 2012
Results reported at Thu Nov 15 19:36:40 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000005.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000005.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 5  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000005.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    120.45 sec.
    Max Memory :      5957 MB
    Max Swap   :      8440 MB

    Max Processes  :         7
    Max Threads    :        74

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
5
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 5
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 5: processing genes 363 - 452
Calculating significance of each gene.
Using projection method.
363	AFP	1
364	AFTPH	1
365	AGA	1
366	AGAP1	1
367	AGAP11	1.256572e-01
368	AGAP2	1
369	AGAP3	1
370	AGAP4	1
371	AGAP5	1
372	AGAP6	1
373	AGAP7	1
374	AGAP8	1
375	AGBL1	3.604300e-01
376	AGBL2	1
377	AGBL4	1
378	AGBL5	1
379	AGER	1
380	AGFG1	1
381	AGFG2	1
382	AGGF1	2.135264e-01
383	AGK	1
384	AGL	4.158327e-02
385	AGMAT	1
386	AGPAT1	1
387	AGPAT2	1
388	AGPAT3	1
389	AGPAT4	1
390	AGPAT5	1
391	AGPAT6	1
392	AGPAT9	1
393	AGPHD1	1
394	AGPS	5.830720e-02
395	AGR2	5.648811e-02
396	AGR3	1
397	AGRN	1
398	AGRP	1
399	AGT	1
400	AGTPBP1	1
401	AGTR1	1
402	AGTR2	1
403	AGTRAP	1
404	AGXT	1
405	AGXT2	1
406	AGXT2L1	1
407	AGXT2L2	1
408	AHCTF1	1
409	AHCY	1
410	AHCYL1	1
411	AHCYL2	1
412	AHDC1	2.048343e-01
413	AHI1	2.597280e-01
414	AHNAK	5.697027e-01
415	AHNAK2	5.579267e-01
416	AHR	1.868651e-01
417	AHRR	1
418	AHSA1	1
419	AHSA2	1
420	AHSG	1
421	AHSP	1
422	AICDA	1
423	AIDA	1
424	AIF1	1
425	AIF1L	1
426	AIFM1	5.586798e-02
427	AIFM2	1
428	AIFM3	1
429	AIG1	1
430	AIM1	4.467554e-02
431	AIM1L	1
432	AIM2	1
433	AIMP1	1
434	AIMP2	1
435	AIP	1
436	AIPL1	1
437	AIRE	1
438	AJAP1	1.281830e-01
439	AK1	1
440	AK2	1
441	AK3	1
442	AK3L1	1
443	AK5	1
444	AK7	1
445	AKAP1	1
446	AKAP10	1
In gene AKAP11 the following bins exceed PROBCAP:
    THCA-EM-A22K-TP	categ 6	N = 5706    n = 1	mu =   1.01e-07
447	AKAP11	3.171944e-01
448	AKAP12	1
449	AKAP13	1
450	AKAP14	1
451	AKAP2	2.387981e-01
452	AKAP3	1
Done

Running MutSig 2:
Scatter job 5: processing genes 363 - 452
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
AHNAK2
Processing conservation and coverage...
57% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.936928e-02	ci left: 2.944970e-01	ci right 3.126176e-01	k: 3035	n:10000
Cons ci ratio: 1.265054e-01	ci left: 8.203252e-02	ci right 9.320908e-02	k: 875	n:10000
KS ci ratio: 5.560388e-02	ci left: 3.226707e-01	ci right 3.412273e-01	k: 3319	n:10000
AHNAK2   10000 perm   4 sec   (2731 perm/sec)   p_kst 3.319000e-01   p_cons 8.750000e-02   p_joint 3.035000e-01

Joint ci ratio: 6.422856e-02	ci left: 1.519339e-01	ci right 1.620661e-01	k: 3139	n:20000
Cons ci ratio: 9.114699e-02	ci left: 8.077881e-02	ci right 8.854244e-02	k: 1692	n:20000
KS ci ratio: 3.924708e-02	ci left: 3.262193e-01	ci right 3.393293e-01	k: 6655	n:20000
AHNAK2   20000 perm   12 sec   (1720 perm/sec)   p_kst 3.327500e-01   p_cons 8.460000e-02   p_joint 1.569500e-01

Outputting figure to mutsig2_images.part000000000005/AHNAK2.4_17416_20000_0.33275_0.0846_0.15695.png
                gene_name: AHNAK2
               theta_stop: 0.091 
                    nperm: 20000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.085 
      ci_cons_bounds_left: 0.081 
     ci_cons_bounds_right: 0.089 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.15 
    ci_joint_bounds_right: 0.16 

Current progress: 25 percent done.
AHNAK
Processing conservation and coverage...
56% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.262343e-03	ci left: 9.632049e-01	ci right 9.703198e-01	k: 9669	n:10000
KS ci ratio: 2.851016e-02	ci left: 6.445828e-01	ci right 6.633275e-01	k: 6540	n:10000
AHNAK   10000 perm   3 sec   (3179 perm/sec)   p_kst 6.540000e-01   p_cons 9.669000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000005/AHNAK.3_17801_10000_0.654_0.9669_1.png
                gene_name: AHNAK
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.65 
        ci_ks_bounds_left: 0.64 
       ci_ks_bounds_right: 0.66 
                   p_cons: 0.97 
      ci_cons_bounds_left: 0.96 
     ci_cons_bounds_right: 0.97 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
AIM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.384917e-02	ci left: 5.630346e-01	ci right 5.825230e-01	k: 5728	n:10000
Cons ci ratio: 3.172396e-02	ci left: 5.945361e-01	ci right 6.138031e-01	k: 6042	n:10000
KS ci ratio: 6.411390e-02	ci left: 2.632958e-01	ci right 2.808372e-01	k: 2720	n:10000
AIM1   10000 perm   2 sec   (5373 perm/sec)   p_kst 2.720000e-01   p_cons 6.042000e-01   p_joint 5.728000e-01

Outputting figure to mutsig2_images.part000000000005/AIM1.3_5252_10000_0.272_0.6042_0.5728.png
                gene_name: AIM1
               theta_stop: 0.064 
                    nperm: 10000 
                     p_ks: 0.27 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.28 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 0.57 
     ci_joint_bounds_left: 0.56 
    ci_joint_bounds_right: 0.58 

Current progress: 75 percent done.
AGL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.376352e-02	ci left: 8.840108e-01	ci right 8.963609e-01	k: 8903	n:10000
Cons ci ratio: 4.741593e-02	ci left: 3.962539e-01	ci right 4.156010e-01	k: 4059	n:10000
KS ci ratio: 1.457434e-02	ci left: 8.720385e-01	ci right 8.849402e-01	k: 8786	n:10000
AGL   10000 perm   2 sec   (5452 perm/sec)   p_kst 8.786000e-01   p_cons 4.059000e-01   p_joint 8.903000e-01

Outputting figure to mutsig2_images.part000000000005/AGL.2_4800_10000_0.8786_0.4059_0.8903.png
                gene_name: AGL
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.41 
      ci_cons_bounds_left: 0.40 
     ci_cons_bounds_right: 0.42 
                  p_joint: 0.89 
     ci_joint_bounds_left: 0.88 
    ci_joint_bounds_right: 0.90 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000005
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 5 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1700>
Subject: Job 8704101: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1700>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000006> was used as the working directory.
Started at Thu Nov 15 19:31:23 2012
Results reported at Thu Nov 15 19:34:20 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000006.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000006.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 6  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000006.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    202.15 sec.
    Max Memory :      6063 MB
    Max Swap   :      8906 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
6
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 6
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 6: processing genes 453 - 543
Calculating significance of each gene.
Using projection method.
453	AKAP4	1
454	AKAP5	1
455	AKAP6	1
456	AKAP7	1
457	AKAP8	1
458	AKAP8L	1.089943e-01
459	AKAP9	4.928996e-01
460	AKD1	1
461	AKIRIN1	1
462	AKIRIN2	1
463	AKNA	1
464	AKNAD1	2.628185e-02
465	AKR1A1	1
466	AKR1B1	1
467	AKR1B10	1
468	AKR1B15	1
469	AKR1C1	1
470	AKR1C2	1
471	AKR1C3	1.113558e-01
472	AKR1C4	1
473	AKR1D1	1
474	AKR1E2	1
475	AKR7A2	1
476	AKR7A3	1
477	AKR7L	6.918082e-02
478	AKT1	1
479	AKT1S1	1
480	AKT2	1
481	AKT3	1
482	AKTIP	1
483	ALAD	1
484	ALAS1	1
485	ALAS2	1
486	ALB	1.338366e-01
487	ALCAM	1.833347e-01
488	ALDH16A1	1
489	ALDH18A1	1
490	ALDH1A1	1
491	ALDH1A2	1
492	ALDH1A3	1
493	ALDH1B1	1
In gene ALDH1L1 the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 2637    n = 1	mu =   1.66e-07
494	ALDH1L1	4.614091e-02
495	ALDH1L2	1
496	ALDH2	1
497	ALDH3A1	1
498	ALDH3A2	1
499	ALDH3B1	1
500	ALDH3B2	1
501	ALDH4A1	1
502	ALDH5A1	1.778452e-01
503	ALDH6A1	1
504	ALDH7A1	1
505	ALDH8A1	1
506	ALDH9A1	1
507	ALDOA	1
508	ALDOB	6.987104e-02
509	ALDOC	1
510	ALG1	1
511	ALG10	1
512	ALG10B	1.405275e-01
513	ALG11	1
514	ALG12	1.779790e-01
515	ALG13	1.202939e-01
516	ALG14	1
517	ALG1L	1
518	ALG1L2	1
519	ALG2	1
520	ALG3	2.137026e-02
521	ALG5	1
522	ALG6	1
523	ALG8	1
524	ALG9	1
525	ALK	3.631576e-01
526	ALKBH1	5.277961e-02
527	ALKBH2	1
528	ALKBH3	1
529	ALKBH4	1
530	ALKBH5	1
531	ALKBH6	1
532	ALKBH7	1
533	ALKBH8	1
534	ALLC	1
535	ALMS1	4.616240e-01
536	ALOX12	9.567113e-02
537	ALOX12B	5.050410e-02
538	ALOX15	1
539	ALOX15B	1
540	ALOX5	1
541	ALOX5AP	1
542	ALOXE3	1.534613e-01
543	ALPI	1
Done

Running MutSig 2:
Scatter job 6: processing genes 453 - 543
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
AKAP9
Processing conservation and coverage...
83% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.620425e-02	ci left: 5.297706e-01	ci right 5.494063e-01	k: 5396	n:10000
KS ci ratio: 4.409943e-02	ci left: 4.315362e-01	ci right 4.510980e-01	k: 4413	n:10000
AKAP9   10000 perm   3 sec   (3604 perm/sec)   p_kst 4.413000e-01   p_cons 5.396000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000006/AKAP9.2_11924_10000_0.4413_0.5396_1.png
                gene_name: AKAP9
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.44 
        ci_ks_bounds_left: 0.43 
       ci_ks_bounds_right: 0.45 
                   p_cons: 0.54 
      ci_cons_bounds_left: 0.53 
     ci_cons_bounds_right: 0.55 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 17 percent done.
AKNAD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.351152e-02	ci left: 5.679478e-01	ci right 5.874070e-01	k: 5777	n:10000
Cons ci ratio: 4.912899e-02	ci left: 3.793287e-01	ci right 3.985361e-01	k: 3889	n:10000
KS ci ratio: 2.118228e-02	ci left: 7.656735e-01	ci right 7.821666e-01	k: 7740	n:10000
AKNAD1   10000 perm   2 sec   (6201 perm/sec)   p_kst 7.740000e-01   p_cons 3.889000e-01   p_joint 5.777000e-01

Outputting figure to mutsig2_images.part000000000006/AKNAD1.2_2571_10000_0.774_0.3889_0.5777.png
                gene_name: AKNAD1
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.39 
      ci_cons_bounds_left: 0.38 
     ci_cons_bounds_right: 0.40 
                  p_joint: 0.58 
     ci_joint_bounds_left: 0.57 
    ci_joint_bounds_right: 0.59 

Current progress: 33 percent done.
ALDH1L1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.242749e-03	ci left: 9.914989e-01	ci right 9.948039e-01	k: 9933	n:10000
Cons ci ratio: 3.330595e-02	ci left: 5.709563e-01	ci right 5.903967e-01	k: 5807	n:10000
KS ci ratio: 3.465118e-02	ci left: 5.515074e-01	ci right 5.710568e-01	k: 5613	n:10000
ALDH1L1   10000 perm   2 sec   (5940 perm/sec)   p_kst 5.613000e-01   p_cons 5.807000e-01   p_joint 9.933000e-01

Outputting figure to mutsig2_images.part000000000006/ALDH1L1.2_2797_10000_0.5613_0.5807_0.9933.png
                gene_name: ALDH1L1
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.56 
        ci_ks_bounds_left: 0.55 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.59 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 50 percent done.
ALG3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.066714e-02	ci left: 7.742826e-01	ci right 7.905526e-01	k: 7825	n:10000
Cons ci ratio: 5.877849e-03	ci left: 9.750383e-01	ci right 9.808786e-01	k: 9781	n:10000
KS ci ratio: 5.118453e-02	ci left: 3.601284e-01	ci right 3.791476e-01	k: 3696	n:10000
ALG3   10000 perm   1 sec   (6785 perm/sec)   p_kst 3.696000e-01   p_cons 9.781000e-01   p_joint 7.825000e-01

Outputting figure to mutsig2_images.part000000000006/ALG3.2_1409_10000_0.3696_0.9781_0.7825.png
                gene_name: ALG3
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.78 
     ci_joint_bounds_left: 0.77 
    ci_joint_bounds_right: 0.79 

Current progress: 67 percent done.
ALMS1
Processing conservation and coverage...
79% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.655280e-01	ci left: 4.868974e-02	ci right 5.757286e-02	k: 530	n:10000
Cons ci ratio: 2.403906e-01	ci left: 2.278143e-02	ci right 2.909884e-02	k: 258	n:10000
KS ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
ALMS1   10000 perm   3 sec   (3498 perm/sec)   p_kst 1   p_cons 2.580000e-02   p_joint 5.300000e-02

Joint ci ratio: 1.007989e-01	ci left: 6.674574e-02	ci right 7.387980e-02	k: 1405	n:20000
Cons ci ratio: 1.628626e-01	ci left: 2.585348e-02	ci right 3.048506e-02	k: 562	n:20000
KS ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
ALMS1   20000 perm   6 sec   (3226 perm/sec)   p_kst 1   p_cons 2.810000e-02   p_joint 7.025000e-02

Joint ci ratio: 8.078814e-02	ci left: 6.981943e-02	ci right 7.573029e-02	k: 2182	n:30000
Cons ci ratio: 1.325343e-01	ci left: 2.645263e-02	ci right 3.023945e-02	k: 849	n:30000
KS ci ratio: 1.306580e-04	ci left: 9.998770e-01	ci right 1	k: 30000	n:30000
ALMS1   30000 perm   10 sec   (3107 perm/sec)   p_kst 1   p_cons 2.830000e-02   p_joint 7.273333e-02

Joint ci ratio: 1.007360e-01	ci left: 3.463466e-02	ci right 3.833302e-02	k: 1458	n:40000
Cons ci ratio: 1.146918e-01	ci left: 2.674533e-02	ci right 3.002362e-02	k: 1134	n:40000
KS ci ratio: 9.799510e-05	ci left: 9.999078e-01	ci right 1	k: 40000	n:40000
ALMS1   40000 perm   13 sec   (3028 perm/sec)   p_kst 1   p_cons 2.835000e-02   p_joint 3.645000e-02

Joint ci ratio: 8.433469e-02	ci left: 3.967052e-02	ci right 4.318298e-02	k: 2070	n:50000
Cons ci ratio: 1.026862e-01	ci left: 2.686391e-02	ci right 2.979119e-02	k: 1415	n:50000
KS ci ratio: 7.839686e-05	ci left: 9.999262e-01	ci right 1	k: 50000	n:50000
ALMS1   50000 perm   17 sec   (2971 perm/sec)   p_kst 1   p_cons 2.830000e-02   p_joint 4.140000e-02

Joint ci ratio: 6.856185e-02	ci left: 4.989249e-02	ci right 5.345103e-02	k: 3099	n:60000
Cons ci ratio: 9.340612e-02	ci left: 2.718309e-02	ci right 2.986278e-02	k: 1710	n:60000
KS ci ratio: 6.533116e-05	ci left: 9.999385e-01	ci right 1	k: 60000	n:60000
ALMS1   60000 perm   21 sec   (2927 perm/sec)   p_kst 1   p_cons 2.850000e-02   p_joint 5.165000e-02

Outputting figure to mutsig2_images.part000000000006/ALMS1.2_12596_60000_1_0.0285_0.05165.png
                gene_name: ALMS1
               theta_stop: 0.093 
                    nperm: 60000 
                     p_ks: 1 
        ci_ks_bounds_left: 1.00 
       ci_ks_bounds_right: 1 
                   p_cons: 0.029 
      ci_cons_bounds_left: 0.027 
     ci_cons_bounds_right: 0.030 
                  p_joint: 0.052 
     ci_joint_bounds_left: 0.050 
    ci_joint_bounds_right: 0.053 

Current progress: 83 percent done.
ALOX12B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.321513e-02	ci left: 8.919018e-01	ci right 9.038653e-01	k: 8980	n:10000
Cons ci ratio: 2.356728e-02	ci left: 7.257273e-01	ci right 7.431359e-01	k: 7345	n:10000
KS ci ratio: 6.519941e-02	ci left: 2.567652e-01	ci right 2.741716e-01	k: 2654	n:10000
ALOX12B   10000 perm   2 sec   (6237 perm/sec)   p_kst 2.654000e-01   p_cons 7.345000e-01   p_joint 8.980000e-01

Outputting figure to mutsig2_images.part000000000006/ALOX12B.2_2166_10000_0.2654_0.7345_0.898.png
                gene_name: ALOX12B
               theta_stop: 0.065 
                    nperm: 10000 
                     p_ks: 0.27 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.27 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.74 
                  p_joint: 0.90 
     ci_joint_bounds_left: 0.89 
    ci_joint_bounds_right: 0.90 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000006
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 6 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1728>
Subject: Job 8704102: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1728>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000007> was used as the working directory.
Started at Thu Nov 15 19:31:23 2012
Results reported at Thu Nov 15 19:34:15 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000007.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000007.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 7  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000007.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    166.91 sec.
    Max Memory :      6171 MB
    Max Swap   :      8505 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
7
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 7
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 7: processing genes 544 - 633
Calculating significance of each gene.
Using projection method.
544	ALPK1	2.943600e-02
545	ALPK2	2.392847e-01
546	ALPK3	3.374102e-01
547	ALPL	1
548	ALPP	9.157104e-02
549	ALPPL2	1
550	ALS2	5.104313e-01
551	ALS2CL	1
552	ALS2CR11	1
553	ALS2CR12	2.244930e-02
554	ALS2CR4	1
555	ALS2CR8	1
556	ALX1	1
557	ALX3	1
558	ALX4	1
559	AMAC1	5.884935e-02
560	AMAC1L2	1
561	AMAC1L3	1
562	AMACR	1
563	AMBN	1.673639e-01
564	AMBP	5.344707e-02
565	AMBRA1	1
566	AMD1	1
In gene AMDHD1 the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 1176    n = 1	mu =   2.33e-07
567	AMDHD1	9.350015e-03
568	AMDHD2	1
569	AMELX	1
570	AMFR	1
571	AMHR2	1.211965e-01
572	AMICA1	1.706368e-01
573	AMIGO1	1
574	AMIGO2	4.983400e-02
575	AMIGO3	1
576	AMMECR1	1
577	AMMECR1L	1
578	AMN	1
579	AMN1	1
580	AMOT	1
581	AMOTL1	2.287501e-01
582	AMOTL2	3.165708e-01
583	AMPD1	2.265813e-01
584	AMPD2	1.017945e-01
585	AMPD3	2.873082e-01
586	AMPH	1
587	AMT	1
588	AMTN	1
589	AMY2A	1.536520e-02
590	AMY2B	1.696180e-02
591	AMZ1	1
592	AMZ2	1
593	ANAPC1	4.574281e-01
594	ANAPC10	1
595	ANAPC11	1
596	ANAPC13	1
597	ANAPC16	1
598	ANAPC2	1.519952e-01
599	ANAPC4	1
600	ANAPC5	1.443975e-02
601	ANAPC7	1
602	ANG	1
603	ANGEL1	1
604	ANGEL2	1
605	ANGPT1	1
In gene ANGPT2 the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 1527    n = 1	mu =   2.06e-07
606	ANGPT2	1.630663e-01
607	ANGPT4	1
608	ANGPTL1	2.050622e-01
609	ANGPTL2	2.131808e-01
610	ANGPTL3	1
611	ANGPTL4	1
612	ANGPTL5	1
613	ANGPTL6	1.153152e-01
614	ANGPTL7	1
615	ANK1	2.374568e-02
616	ANK2	5.233895e-01
617	ANK3	7.855242e-01
618	ANKAR	1.964393e-01
619	ANKDD1A	1
620	ANKFN1	1
621	ANKFY1	1
622	ANKH	1
623	ANKHD1	1
In gene ANKHD1-EIF4EBP3 the following bins exceed PROBCAP:
    THCA-ET-A3BW-TP	categ 6	N = 7848    n = 1	mu =   6.84e-08
624	ANKHD1-EIF4EBP3	4.115767e-01
625	ANKIB1	1
626	ANKK1	1
627	ANKLE1	1.032294e-01
628	ANKLE2	1
629	ANKMY1	4.003952e-01
630	ANKMY2	1
631	ANKRA2	1
632	ANKRD1	1
633	ANKRD10	1
Done

Running MutSig 2:
Scatter job 7: processing genes 544 - 633
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ANK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.121293e-01	ci left: 1.027615e-01	ci right 1.150674e-01	k: 1088	n:10000
Cons ci ratio: 3.198321e-02	ci left: 5.906213e-01	ci right 6.099202e-01	k: 6003	n:10000
KS ci ratio: 1.247955e-01	ci left: 8.416945e-02	ci right 9.547082e-02	k: 897	n:10000
ANK1   10000 perm   2 sec   (5106 perm/sec)   p_kst 8.970000e-02   p_cons 6.003000e-01   p_joint 1.088000e-01

Joint ci ratio: 7.880247e-02	ci left: 1.057447e-01	ci right 1.144690e-01	k: 2201	n:20000
Cons ci ratio: 2.282469e-02	ci left: 5.890606e-01	ci right 6.027115e-01	k: 11918	n:20000
KS ci ratio: 8.868017e-02	ci left: 8.503968e-02	ci right 9.298028e-02	k: 1779	n:20000
ANK1   20000 perm   6 sec   (3244 perm/sec)   p_kst 8.895000e-02   p_cons 5.959000e-01   p_joint 1.100500e-01

Outputting figure to mutsig2_images.part000000000007/ANK1.4_6298_20000_0.08895_0.5959_0.11005.png
                gene_name: ANK1
               theta_stop: 0.089 
                    nperm: 20000 
                     p_ks: 0.089 
        ci_ks_bounds_left: 0.085 
       ci_ks_bounds_right: 0.093 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.60 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.11 
    ci_joint_bounds_right: 0.11 

Current progress: 12 percent done.
ALPK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.717374e-02	ci left: 6.661229e-01	ci right 6.845749e-01	k: 6754	n:10000
Cons ci ratio: 2.257745e-02	ci left: 7.423010e-01	ci right 7.593527e-01	k: 7509	n:10000
KS ci ratio: 4.215023e-02	ci left: 4.538878e-01	ci right 4.735333e-01	k: 4637	n:10000
ALPK1   10000 perm   2 sec   (6220 perm/sec)   p_kst 4.637000e-01   p_cons 7.509000e-01   p_joint 6.754000e-01

Outputting figure to mutsig2_images.part000000000007/ALPK1.2_3791_10000_0.4637_0.7509_0.6754.png
                gene_name: ALPK1
               theta_stop: 0.042 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.76 
                  p_joint: 0.68 
     ci_joint_bounds_left: 0.67 
    ci_joint_bounds_right: 0.68 

Current progress: 25 percent done.
ALPK2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.503433e-03	ci left: 9.699492e-01	ci right 9.763711e-01	k: 9733	n:10000
KS ci ratio: 4.227052e-03	ci left: 9.863209e-01	ci right 9.905875e-01	k: 9886	n:10000
ALPK2   10000 perm   2 sec   (5370 perm/sec)   p_kst 9.886000e-01   p_cons 9.733000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000007/ALPK2.2_6561_10000_0.9886_0.9733_1.png
                gene_name: ALPK2
               theta_stop: 0.0065 
                    nperm: 10000 
                     p_ks: 0.99 
        ci_ks_bounds_left: 0.99 
       ci_ks_bounds_right: 0.99 
                   p_cons: 0.97 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 38 percent done.
AMDHD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.135306e-01	ci left: 2.911124e-02	ci right 3.616447e-02	k: 325	n:10000
Cons ci ratio: 2.644396e-01	ci left: 1.865372e-02	ci right 2.442970e-02	k: 214	n:10000
KS ci ratio: 5.624939e-02	ci left: 3.176084e-01	ci right 3.360925e-01	k: 3268	n:10000
AMDHD1   10000 perm   1 sec   (7411 perm/sec)   p_kst 3.268000e-01   p_cons 2.140000e-02   p_joint 3.250000e-02

Joint ci ratio: 1.013035e-01	ci left: 6.611102e-02	ci right 7.321471e-02	k: 1392	n:20000
Cons ci ratio: 1.869915e-01	ci left: 1.948692e-02	ci right 2.355385e-02	k: 429	n:20000
KS ci ratio: 3.997858e-02	ci left: 3.181117e-01	ci right 3.311393e-01	k: 6492	n:20000
AMDHD1   20000 perm   3 sec   (6552 perm/sec)   p_kst 3.246000e-01   p_cons 2.145000e-02   p_joint 6.960000e-02

Joint ci ratio: 1.191303e-01	ci left: 3.275459e-02	ci right 3.693612e-02	k: 1044	n:30000
Cons ci ratio: 1.530433e-01	ci left: 1.976016e-02	ci right 2.306676e-02	k: 641	n:30000
KS ci ratio: 3.255944e-02	ci left: 3.204306e-01	ci right 3.310698e-01	k: 9772	n:30000
AMDHD1   30000 perm   5 sec   (6215 perm/sec)   p_kst 3.257333e-01   p_cons 2.136667e-02   p_joint 3.480000e-02

Joint ci ratio: 7.780260e-02	ci left: 5.734857e-02	ci right 6.201561e-02	k: 2386	n:40000
Cons ci ratio: 1.332575e-01	ci left: 1.976230e-02	ci right 2.260780e-02	k: 846	n:40000
KS ci ratio: 2.819517e-02	ci left: 3.211825e-01	ci right 3.303928e-01	k: 13031	n:40000
AMDHD1   40000 perm   7 sec   (5995 perm/sec)   p_kst 3.257750e-01   p_cons 2.115000e-02   p_joint 5.965000e-02

Joint ci ratio: 5.158330e-02	ci left: 1.008629e-01	ci right 1.062233e-01	k: 5176	n:50000
Cons ci ratio: 1.185476e-01	ci left: 2.012998e-02	ci right 2.268601e-02	k: 1069	n:50000
KS ci ratio: 2.526913e-02	ci left: 3.207952e-01	ci right 3.290252e-01	k: 16245	n:50000
AMDHD1   50000 perm   9 sec   (5816 perm/sec)   p_kst 3.249000e-01   p_cons 2.138000e-02   p_joint 1.035200e-01

Joint ci ratio: 3.852436e-02	ci left: 1.443242e-01	ci right 1.500100e-01	k: 8829	n:60000
Cons ci ratio: 1.086519e-01	ci left: 2.007847e-02	ci right 2.240150e-02	k: 1273	n:60000
KS ci ratio: 2.307727e-02	ci left: 3.209700e-01	ci right 3.284803e-01	k: 19483	n:60000
AMDHD1   60000 perm   11 sec   (5674 perm/sec)   p_kst 3.247167e-01   p_cons 2.121667e-02   p_joint 1.471500e-01

Joint ci ratio: 3.555879e-02	ci left: 1.452918e-01	ci right 1.505660e-01	k: 10354	n:70000
Cons ci ratio: 1.000548e-01	ci left: 2.038250e-02	ci right 2.254313e-02	k: 1501	n:70000
KS ci ratio: 2.143123e-02	ci left: 3.199065e-01	ci right 3.268510e-01	k: 22636	n:70000
AMDHD1   70000 perm   13 sec   (5542 perm/sec)   p_kst 3.233714e-01   p_cons 2.144286e-02   p_joint 1.479143e-01

Joint ci ratio: 1.828665e-02	ci left: 3.614880e-01	ci right 3.681718e-01	k: 29186	n:80000
Cons ci ratio: 9.316583e-02	ci left: 2.064040e-02	ci right 2.266949e-02	k: 1731	n:80000
KS ci ratio: 2.001726e-02	ci left: 3.207821e-01	ci right 3.272807e-01	k: 25922	n:80000
AMDHD1   80000 perm   15 sec   (5430 perm/sec)   p_kst 3.240250e-01   p_cons 2.163750e-02   p_joint 3.648250e-01

Outputting figure to mutsig2_images.part000000000007/AMDHD1.2_1317_80000_0.32403_0.021638_0.36483.png
                gene_name: AMDHD1
               theta_stop: 0.093 
                    nperm: 80000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.022 
      ci_cons_bounds_left: 0.021 
     ci_cons_bounds_right: 0.023 
                  p_joint: 0.36 
     ci_joint_bounds_left: 0.36 
    ci_joint_bounds_right: 0.37 

Current progress: 50 percent done.
AMY2B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.956981e-02	ci left: 6.277880e-01	ci right 6.467320e-01	k: 6373	n:10000
KS ci ratio: 3.628446e-02	ci left: 5.286693e-01	ci right 5.483083e-01	k: 5385	n:10000
AMY2B   10000 perm   1 sec   (7327 perm/sec)   p_kst 5.385000e-01   p_cons 6.373000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000007/AMY2B.2_1576_10000_0.5385_0.6373_1.png
                gene_name: AMY2B
               theta_stop: 0.036 
                    nperm: 10000 
                     p_ks: 0.54 
        ci_ks_bounds_left: 0.53 
       ci_ks_bounds_right: 0.55 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 62 percent done.
ANAPC5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.469315e-02	ci left: 7.069489e-01	ci right 7.247252e-01	k: 7159	n:10000
Cons ci ratio: 3.398073e-02	ci left: 5.611297e-01	ci right 5.806290e-01	k: 5709	n:10000
KS ci ratio: 9.198086e-02	ci left: 1.465847e-01	ci right 1.608177e-01	k: 1536	n:10000
ANAPC5   10000 perm   1 sec   (6966 perm/sec)   p_kst 1.536000e-01   p_cons 5.709000e-01   p_joint 7.159000e-01

Outputting figure to mutsig2_images.part000000000007/ANAPC5.2_2336_10000_0.1536_0.5709_0.7159.png
                gene_name: ANAPC5
               theta_stop: 0.092 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.72 
     ci_joint_bounds_left: 0.71 
    ci_joint_bounds_right: 0.72 

Current progress: 75 percent done.
ANK2
Processing conservation and coverage...
82% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.606345e-01	ci left: 5.166964e-02	ci right 6.079103e-02	k: 561	n:10000
KS ci ratio: 2.809059e-01	ci left: 1.641496e-02	ci right 2.187026e-02	k: 190	n:10000
ANK2   10000 perm   2 sec   (4113 perm/sec)   p_kst 1.900000e-02   p_cons 5.610000e-02   p_joint 1

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 1.141271e-01	ci left: 5.251267e-02	ci right 5.891727e-02	k: 1113	n:20000
KS ci ratio: 1.970633e-01	ci left: 1.748601e-02	ci right 2.135550e-02	k: 387	n:20000
ANK2   20000 perm   5 sec   (3781 perm/sec)   p_kst 1.935000e-02   p_cons 5.565000e-02   p_joint 1

Joint ci ratio: 1.149743e-02	ci left: 7.902522e-01	ci right 7.994239e-01	k: 23846	n:30000
Cons ci ratio: 9.538094e-02	ci left: 5.075222e-02	ci right 5.586806e-02	k: 1598	n:30000
KS ci ratio: 1.607620e-01	ci left: 1.786925e-02	ci right 2.102478e-02	k: 582	n:30000
ANK2   30000 perm   8 sec   (3647 perm/sec)   p_kst 1.940000e-02   p_cons 5.326667e-02   p_joint 7.948667e-01

Joint ci ratio: 3.281829e-03	ci left: 9.711073e-01	ci right 9.743236e-01	k: 38910	n:40000
Cons ci ratio: 8.187499e-02	ci left: 5.197661e-02	ci right 5.643838e-02	k: 2167	n:40000
KS ci ratio: 1.401777e-01	ci left: 1.782941e-02	ci right 2.054103e-02	k: 766	n:40000
ANK2   40000 perm   11 sec   (3562 perm/sec)   p_kst 1.915000e-02   p_cons 5.417500e-02   p_joint 9.727500e-01

Joint ci ratio: 4.271212e-03	ci left: 9.419284e-01	ci right 9.459798e-01	k: 47199	n:50000
Cons ci ratio: 7.310313e-02	ci left: 5.238861e-02	ci right 5.638333e-02	k: 2718	n:50000
KS ci ratio: 1.258314e-01	ci left: 1.784070e-02	ci right 2.025560e-02	k: 951	n:50000
ANK2   50000 perm   14 sec   (3495 perm/sec)   p_kst 1.902000e-02   p_cons 5.436000e-02   p_joint 9.439800e-01

Joint ci ratio: 3.123520e-03	ci left: 9.617816e-01	ci right 9.648067e-01	k: 57799	n:60000
Cons ci ratio: 6.639876e-02	ci left: 5.307420e-02	ci right 5.673567e-02	k: 3293	n:60000
KS ci ratio: 1.146840e-01	ci left: 1.800356e-02	ci right 2.020997e-02	k: 1145	n:60000
ANK2   60000 perm   17 sec   (3436 perm/sec)   p_kst 1.908333e-02   p_cons 5.488333e-02   p_joint 9.633167e-01

Joint ci ratio: 6.827694e-02	ci left: 4.343388e-02	ci right 4.651826e-02	k: 3147	n:70000
Cons ci ratio: 6.158366e-02	ci left: 5.302682e-02	ci right 5.641021e-02	k: 3829	n:70000
KS ci ratio: 1.058143e-01	ci left: 1.821016e-02	ci right 2.025854e-02	k: 1345	n:70000
ANK2   70000 perm   21 sec   (3385 perm/sec)   p_kst 1.921429e-02   p_cons 5.470000e-02   p_joint 4.495714e-02

Joint ci ratio: 8.355653e-02	ci left: 2.565509e-02	ci right 2.790440e-02	k: 2141	n:80000
Cons ci ratio: 8.375764e-02	ci left: 2.553264e-02	ci right 2.777687e-02	k: 2131	n:80000
KS ci ratio: 9.869567e-02	ci left: 1.838226e-02	ci right 2.030282e-02	k: 1546	n:80000
ANK2   80000 perm   24 sec   (3334 perm/sec)   p_kst 1.932500e-02   p_cons 2.663750e-02   p_joint 2.676250e-02

Outputting figure to mutsig2_images.part000000000007/ANK2.2_12123_80000_0.019325_0.026638_0.026763.png
                gene_name: ANK2
               theta_stop: 0.099 
                    nperm: 80000 
                     p_ks: 0.019 
        ci_ks_bounds_left: 0.018 
       ci_ks_bounds_right: 0.020 
                   p_cons: 0.027 
      ci_cons_bounds_left: 0.026 
     ci_cons_bounds_right: 0.028 
                  p_joint: 0.027 
     ci_joint_bounds_left: 0.026 
    ci_joint_bounds_right: 0.028 

Current progress: 88 percent done.
ANK3
Processing conservation and coverage...
73% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.918711e-03	ci left: 9.350622e-01	ci right 9.444796e-01	k: 9399	n:10000
Cons ci ratio: 2.296963e-02	ci left: 7.357303e-01	ci right 7.529272e-01	k: 7444	n:10000
KS ci ratio: 4.549450e-02	ci left: 4.162808e-01	ci right 4.357623e-01	k: 4260	n:10000
ANK3   10000 perm   3 sec   (3870 perm/sec)   p_kst 4.260000e-01   p_cons 7.444000e-01   p_joint 9.399000e-01

Outputting figure to mutsig2_images.part000000000007/ANK3.2_13639_10000_0.426_0.7444_0.9399.png
                gene_name: ANK3
               theta_stop: 0.045 
                    nperm: 10000 
                     p_ks: 0.43 
        ci_ks_bounds_left: 0.42 
       ci_ks_bounds_right: 0.44 
                   p_cons: 0.74 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.75 
                  p_joint: 0.94 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.94 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000007
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 7 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1702>
Subject: Job 8704104: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1702>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000008> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:34:26 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000008.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000008.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 8  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000008.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    192.89 sec.
    Max Memory :      5794 MB
    Max Swap   :      8495 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
8
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 8
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 8: processing genes 634 - 724
Calculating significance of each gene.
Using projection method.
634	ANKRD11	1
635	ANKRD12	3.078718e-01
636	ANKRD13A	1
637	ANKRD13B	1
638	ANKRD13C	1
639	ANKRD13D	2.051994e-01
640	ANKRD16	1
641	ANKRD17	4.905909e-01
642	ANKRD2	1
643	ANKRD20A1	1
644	ANKRD20A4	1
645	ANKRD22	1
646	ANKRD23	1
647	ANKRD24	1.497418e-01
648	ANKRD26	1
649	ANKRD27	1
650	ANKRD28	1
651	ANKRD29	1
In gene ANKRD30A the following bins exceed PROBCAP:
    THCA-EM-A2OX-TP	categ 5	N = 3288    n = 1	mu =   6.90e-08
652	ANKRD30A	2.130259e-04
653	ANKRD30B	1
654	ANKRD32	1
655	ANKRD33	1
656	ANKRD34A	1
657	ANKRD34B	1
658	ANKRD35	1
659	ANKRD36	9.134682e-02
660	ANKRD36B	1
661	ANKRD37	1
662	ANKRD39	1
663	ANKRD40	1
664	ANKRD42	1.000732e-02
665	ANKRD44	1.012860e-01
666	ANKRD45	1
667	ANKRD46	1
668	ANKRD49	1
669	ANKRD5	1
670	ANKRD50	1
671	ANKRD52	1
672	ANKRD53	1
673	ANKRD54	3.945417e-02
674	ANKRD55	1
675	ANKRD56	1.265309e-01
676	ANKRD57	1
677	ANKRD58	1
678	ANKRD6	3.759807e-02
679	ANKRD7	1
680	ANKS1A	3.839980e-02
681	ANKS1B	1
682	ANKS3	1
683	ANKS4B	9.566184e-02
684	ANKS6	1
685	ANKZF1	1
686	ANLN	1
687	ANO1	1
688	ANO10	1
689	ANO2	1.859670e-01
690	ANO3	1
691	ANO4	2.212541e-01
692	ANO5	1
693	ANO6	1
694	ANO7	1
695	ANO8	1
696	ANO9	1
697	ANP32A	1.582394e-02
698	ANP32B	1
699	ANP32C	6.889170e-02
700	ANP32D	1
701	ANP32E	1
702	ANPEP	1
703	ANTXR1	1
704	ANTXR2	6.906369e-02
705	ANUBL1	1
706	ANXA1	1
707	ANXA10	1
708	ANXA11	1
709	ANXA13	1
710	ANXA2	1
711	ANXA3	1
712	ANXA4	1
713	ANXA5	1
714	ANXA6	1
715	ANXA7	1
716	ANXA9	1
717	AOAH	1
718	AOC2	1
719	AOC3	1
720	AOX1	2.138310e-01
721	AP1AR	1
722	AP1B1	1
723	AP1G1	1
724	AP1G2	1
Done

Running MutSig 2:
Scatter job 8: processing genes 634 - 724
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ANKRD30A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.412142e-02	ci left: 1.708424e-01	ci right 1.859454e-01	k: 1783	n:10000
Cons ci ratio: 2.833421e-03	ci left: 9.932998e-01	ci right 9.962004e-01	k: 9949	n:10000
KS ci ratio: 1.509149e-01	ci left: 5.841227e-02	ci right 6.804410e-02	k: 631	n:10000
ANKRD30A   10000 perm   2 sec   (4842 perm/sec)   p_kst 6.310000e-02   p_cons 9.949000e-01   p_joint 1.783000e-01

Joint ci ratio: 5.978982e-02	ci left: 1.715845e-01	ci right 1.822097e-01	k: 3537	n:20000
Cons ci ratio: 2.003782e-03	ci left: 9.937576e-01	ci right 9.957945e-01	k: 19897	n:20000
KS ci ratio: 1.046962e-01	ci left: 6.206076e-02	ci right 6.896621e-02	k: 1309	n:20000
ANKRD30A   20000 perm   7 sec   (2915 perm/sec)   p_kst 6.545000e-02   p_cons 9.948500e-01   p_joint 1.768500e-01

Joint ci ratio: 5.941741e-02	ci left: 1.229226e-01	ci right 1.304832e-01	k: 3800	n:30000
Cons ci ratio: 1.593431e-03	ci left: 9.942433e-01	ci right 9.958586e-01	k: 29853	n:30000
KS ci ratio: 8.560127e-02	ci left: 6.252989e-02	ci right 6.815464e-02	k: 1959	n:30000
ANKRD30A   30000 perm   9 sec   (3211 perm/sec)   p_kst 6.530000e-02   p_cons 9.951000e-01   p_joint 1.266667e-01

Outputting figure to mutsig2_images.part000000000008/ANKRD30A.5_4166_30000_0.0653_0.9951_0.12667.png
                gene_name: ANKRD30A
               theta_stop: 0.086 
                    nperm: 30000 
                     p_ks: 0.065 
        ci_ks_bounds_left: 0.063 
       ci_ks_bounds_right: 0.068 
                   p_cons: 1.00 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.13 
     ci_joint_bounds_left: 0.12 
    ci_joint_bounds_right: 0.13 

Current progress: 33 percent done.
ANKRD42
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.835287e-02	ci left: 6.470981e-01	ci right 6.658107e-01	k: 6565	n:10000
KS ci ratio: 2.542912e-02	ci left: 6.947428e-01	ci right 7.127384e-01	k: 7038	n:10000
ANKRD42   10000 perm   2 sec   (5174 perm/sec)   p_kst 7.038000e-01   p_cons 6.565000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000008/ANKRD42.2_1210_10000_0.7038_0.6565_1.png
                gene_name: ANKRD42
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.69 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.65 
     ci_cons_bounds_right: 0.67 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
ANKS1A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.213000e-02	ci left: 5.884132e-01	ci right 6.077296e-01	k: 5981	n:10000
Cons ci ratio: 5.713003e-02	ci left: 3.108607e-01	ci right 3.292442e-01	k: 3200	n:10000
KS ci ratio: 6.937534e-02	ci left: 2.335329e-01	ci right 2.504177e-01	k: 2419	n:10000
ANKS1A   10000 perm   2 sec   (4982 perm/sec)   p_kst 2.419000e-01   p_cons 3.200000e-01   p_joint 5.981000e-01

Outputting figure to mutsig2_images.part000000000008/ANKS1A.2_3501_10000_0.2419_0.32_0.5981.png
                gene_name: ANKS1A
               theta_stop: 0.069 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.60 
     ci_joint_bounds_left: 0.59 
    ci_joint_bounds_right: 0.61 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000008
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 8 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1554>
Subject: Job 8704105: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1554>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000009> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:35:15 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000009.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000009.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 9  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000009.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    312.83 sec.
    Max Memory :      5785 MB
    Max Swap   :      8516 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
9
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 9
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 9: processing genes 725 - 814
Calculating significance of each gene.
Using projection method.
725	AP1M1	1
726	AP1M2	1
727	AP1S1	1
728	AP1S2	1
729	AP1S3	1
730	AP2A1	1
731	AP2A2	1
732	AP2B1	1.932812e-01
733	AP2M1	1
734	AP2S1	1
735	AP3B1	9.459116e-03
736	AP3B2	1
737	AP3D1	3.829208e-01
738	AP3M1	5.201896e-02
739	AP3M2	1.844252e-01
740	AP3S1	1
741	AP3S2	1
742	AP4B1	1
743	AP4E1	1
744	AP4M1	1
745	AP4S1	1
In gene APAF1 the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 3851    n = 1	mu =   1.35e-07
746	APAF1	6.717908e-02
747	APBA1	1
748	APBA2	1
749	APBA3	1
750	APBB1	2.070375e-02
751	APBB1IP	1
752	APBB2	1
753	APBB3	1
In gene APC the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 8592    n = 1	mu =   1.07e-07
754	APC	5.066096e-01
755	APC2	1
756	APCDD1	1.438372e-01
757	APCDD1L	1
758	APCS	1
759	APEH	1
760	APEX1	1.232250e-01
761	APEX2	1
762	APH1A	1
763	APH1B	1
764	API5	1
765	APIP	1
766	APITD1	1
767	APLF	1
768	APLNR	1
769	APLP1	1
770	APLP2	1
771	APOA1	1
772	APOA1BP	1
773	APOA2	1
In gene APOA4 the following bins exceed PROBCAP:
    THCA-FE-A235-TP	categ 6	N = 1200    n = 1	mu =   1.02e-07
774	APOA4	6.144675e-02
775	APOA5	1
776	APOB	3.620377e-02
777	APOB48R	2.267848e-01
778	APOBEC1	1
779	APOBEC2	1.876431e-02
780	APOBEC3A	1
781	APOBEC3B	1
782	APOBEC3C	1
783	APOBEC3D	3.516244e-02
784	APOBEC3F	1
785	APOBEC3G	1
786	APOBEC3H	1
787	APOBEC4	1
788	APOC1	1
789	APOC2	1
790	APOC3	1
791	APOC4	1
792	APOD	1
793	APOE	1
794	APOF	1
795	APOH	1
796	APOL1	1
797	APOL2	1
798	APOL3	1
799	APOL4	1
800	APOL5	1
801	APOL6	1
802	APOLD1	1
803	APOM	1
804	APOO	1
In gene APOOL the following bins exceed PROBCAP:
    THCA-FY-A3I4-TP	categ 6	N = 543     n = 1	mu =   1.02e-07
805	APOOL	2.571620e-02
806	APP	1
807	APPBP2	1
808	APPL1	1
809	APPL2	1
810	APRT	1
811	APTX	1
812	AQP1	1
813	AQP10	1
814	AQP11	1
Done

Running MutSig 2:
Scatter job 9: processing genes 725 - 814
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
APOB
Processing conservation and coverage...
72% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.334700e-02	ci left: 5.703546e-01	ci right 5.897987e-01	k: 5801	n:10000
Cons ci ratio: 3.226381e-02	ci left: 5.864060e-01	ci right 6.057380e-01	k: 5961	n:10000
KS ci ratio: 4.688919e-02	ci left: 4.016326e-01	ci right 4.210191e-01	k: 4113	n:10000
APOB   10000 perm   4 sec   (2265 perm/sec)   p_kst 4.113000e-01   p_cons 5.961000e-01   p_joint 5.801000e-01

Outputting figure to mutsig2_images.part000000000009/APOB.5_13808_10000_0.4113_0.5961_0.5801.png
                gene_name: APOB
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 0.58 
     ci_joint_bounds_left: 0.57 
    ci_joint_bounds_right: 0.59 

Current progress: 25 percent done.
AP3B1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.088317e-02	ci left: 1.824506e-01	ci right 1.979303e-01	k: 1901	n:10000
Cons ci ratio: 1.082099e-01	ci left: 1.096886e-01	ci right 1.223361e-01	k: 1159	n:10000
KS ci ratio: 4.764275e-02	ci left: 3.939633e-01	ci right 4.132929e-01	k: 4036	n:10000
AP3B1   10000 perm   2 sec   (5019 perm/sec)   p_kst 4.036000e-01   p_cons 1.159000e-01   p_joint 1.901000e-01

Joint ci ratio: 4.963128e-02	ci left: 2.318140e-01	ci right 2.436623e-01	k: 4754	n:20000
Cons ci ratio: 7.725382e-02	ci left: 1.096268e-01	ci right 1.184858e-01	k: 2280	n:20000
KS ci ratio: 3.390255e-02	ci left: 3.937987e-01	ci right 4.074303e-01	k: 8012	n:20000
AP3B1   20000 perm   5 sec   (4434 perm/sec)   p_kst 4.006000e-01   p_cons 1.140000e-01   p_joint 2.377000e-01

Outputting figure to mutsig2_images.part000000000009/AP3B1.3_3393_20000_0.4006_0.114_0.2377.png
                gene_name: AP3B1
               theta_stop: 0.077 
                    nperm: 20000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.11 
      ci_cons_bounds_left: 0.11 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.24 
     ci_joint_bounds_left: 0.23 
    ci_joint_bounds_right: 0.24 

Current progress: 50 percent done.
APAF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.825522e-02	ci left: 8.141562e-01	ci right 8.292559e-01	k: 8218	n:10000
KS ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
APAF1   10000 perm   2 sec   (4739 perm/sec)   p_kst 1   p_cons 8.218000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000009/APAF1.2_3851_10000_1_0.8218_1.png
                gene_name: APAF1
               theta_stop: 0.018 
                    nperm: 10000 
                     p_ks: 1 
        ci_ks_bounds_left: 1.00 
       ci_ks_bounds_right: 1 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.83 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
APBB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.830549e-02	ci left: 3.021317e-01	ci right 3.203783e-01	k: 3112	n:10000
Cons ci ratio: 2.350084e-02	ci left: 7.268385e-01	ci right 7.442241e-01	k: 7356	n:10000
KS ci ratio: 8.543583e-02	ci left: 1.664188e-01	ci right 1.813717e-01	k: 1738	n:10000
APBB1   10000 perm   2 sec   (5862 perm/sec)   p_kst 1.738000e-01   p_cons 7.356000e-01   p_joint 3.112000e-01

Outputting figure to mutsig2_images.part000000000009/APBB1.2_2185_10000_0.1738_0.7356_0.3112.png
                gene_name: APBB1
               theta_stop: 0.085 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.74 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.74 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.32 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000009
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 9 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1546>
Subject: Job 8704107: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1546>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000010> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:36:52 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000010.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000010.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 10  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000010.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    366.07 sec.
    Max Memory :      6042 MB
    Max Swap   :      8497 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
10
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 10
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 10: processing genes 815 - 905
Calculating significance of each gene.
Using projection method.
815	AQP12A	1
816	AQP12B	1
817	AQP2	1
818	AQP3	1
819	AQP4	3.006759e-02
820	AQP5	1.365312e-01
821	AQP6	5.108746e-02
822	AQP7	1
823	AQP8	1
824	AQP9	1
825	AQPEP	1
826	AQR	1
827	AR	1
828	ARAF	1
829	ARAP1	1.545346e-01
830	ARAP2	2.312718e-01
831	ARAP3	3.974861e-01
832	ARC	5.462674e-02
833	ARCN1	1
834	AREG	1
835	ARF1	1
836	ARF3	1
837	ARF4	1
838	ARF5	1
839	ARF6	1
840	ARFGAP1	1
841	ARFGAP2	9.627855e-02
842	ARFGAP3	1
843	ARFGEF1	1
844	ARFGEF2	6.258200e-03
845	ARFIP1	1
846	ARFIP2	1.380353e-02
847	ARFRP1	1
848	ARG1	1
849	ARG2	1
850	ARGFX	1
851	ARGLU1	1
852	ARHGAP1	1.107268e-01
853	ARHGAP10	1
854	ARHGAP11A	1
855	ARHGAP11B	1
856	ARHGAP12	1
857	ARHGAP15	1
858	ARHGAP17	1.674320e-01
859	ARHGAP18	1.613468e-01
860	ARHGAP19	1
861	ARHGAP20	1
862	ARHGAP21	2.630406e-01
863	ARHGAP22	1
864	ARHGAP24	1
865	ARHGAP25	1
866	ARHGAP26	4.232923e-02
867	ARHGAP27	1
868	ARHGAP28	1
869	ARHGAP29	2.556900e-01
870	ARHGAP30	3.783577e-01
871	ARHGAP31	1
872	ARHGAP32	5.483205e-01
In gene ARHGAP33 the following bins exceed PROBCAP:
    THCA-DJ-A2PY-TP	categ 6	N = 3094    n = 1	mu =   6.81e-08
873	ARHGAP33	1.518577e-01
874	ARHGAP36	1.940742e-01
875	ARHGAP39	1
876	ARHGAP4	1.531176e-01
877	ARHGAP5	1
878	ARHGAP6	2.342406e-01
879	ARHGAP8	1
880	ARHGAP9	1
881	ARHGDIA	1
882	ARHGDIB	1
883	ARHGDIG	1
884	ARHGEF1	1
885	ARHGEF10	1
886	ARHGEF10L	1.014647e-01
887	ARHGEF11	1
888	ARHGEF12	1
889	ARHGEF15	1
890	ARHGEF16	1
891	ARHGEF17	1
892	ARHGEF18	3.628503e-01
893	ARHGEF19	1
894	ARHGEF2	1.953191e-01
895	ARHGEF3	1
896	ARHGEF35	1
897	ARHGEF37	1
898	ARHGEF38	1
899	ARHGEF4	2.360308e-01
900	ARHGEF5	1
901	ARHGEF6	2.775540e-01
902	ARHGEF7	3.603935e-02
903	ARHGEF9	1
904	ARID1A	1
905	ARID1B	3.874570e-04
Done

Running MutSig 2:
Scatter job 10: processing genes 815 - 905
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ARID1B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.930804e-02	ci left: 1.280657e-01	ci right 1.415478e-01	k: 1347	n:10000
Cons ci ratio: 2.954286e-01	ci left: 1.474309e-02	ci right 1.994354e-02	k: 172	n:10000
KS ci ratio: 5.589344e-02	ci left: 3.203876e-01	ci right 3.389118e-01	k: 3296	n:10000
ARID1B   10000 perm   3 sec   (3167 perm/sec)   p_kst 3.296000e-01   p_cons 1.720000e-02   p_joint 1.347000e-01

Joint ci ratio: 8.757747e-02	ci left: 8.704867e-02	ci right 9.507068e-02	k: 1820	n:20000
Cons ci ratio: 2.277143e-01	ci left: 1.293634e-02	ci right 1.630694e-02	k: 291	n:20000
KS ci ratio: 3.947352e-02	ci left: 3.236824e-01	ci right 3.367670e-01	k: 6604	n:20000
ARID1B   20000 perm   10 sec   (2047 perm/sec)   p_kst 3.302000e-01   p_cons 1.455000e-02   p_joint 9.100000e-02

Joint ci ratio: 9.752563e-02	ci left: 4.860257e-02	ci right 5.361815e-02	k: 1532	n:30000
Cons ci ratio: 1.848616e-01	ci left: 1.340044e-02	ci right 1.616136e-02	k: 442	n:30000
KS ci ratio: 3.215607e-02	ci left: 3.259073e-01	ci right 3.365920e-01	k: 9937	n:30000
ARID1B   30000 perm   13 sec   (2256 perm/sec)   p_kst 3.312333e-01   p_cons 1.473333e-02   p_joint 5.106667e-02

Joint ci ratio: 9.452118e-02	ci left: 3.927313e-02	ci right 4.319383e-02	k: 1648	n:40000
Cons ci ratio: 1.599124e-01	ci left: 1.361547e-02	ci right 1.600573e-02	k: 591	n:40000
KS ci ratio: 2.765530e-02	ci left: 3.297016e-01	ci right 3.389725e-01	k: 13373	n:40000
ARID1B   40000 perm   17 sec   (2362 perm/sec)   p_kst 3.343250e-01   p_cons 1.477500e-02   p_joint 4.120000e-02

Joint ci ratio: 8.374583e-02	ci left: 4.021923e-02	ci right 4.375420e-02	k: 2098	n:50000
Cons ci ratio: 1.418673e-01	ci left: 1.397209e-02	ci right 1.612475e-02	k: 751	n:50000
KS ci ratio: 2.481086e-02	ci left: 3.288489e-01	ci right 3.371305e-01	k: 16649	n:50000
ARID1B   50000 perm   20 sec   (2440 perm/sec)   p_kst 3.329800e-01   p_cons 1.502000e-02   p_joint 4.196000e-02

Joint ci ratio: 6.239834e-02	ci left: 5.978766e-02	ci right 6.365487e-02	k: 3702	n:60000
Cons ci ratio: 1.281015e-01	ci left: 1.438145e-02	ci right 1.636583e-02	k: 921	n:60000
KS ci ratio: 2.281068e-02	ci left: 3.260714e-01	ci right 3.336118e-01	k: 19790	n:60000
ARID1B   60000 perm   24 sec   (2480 perm/sec)   p_kst 3.298333e-01   p_cons 1.535000e-02   p_joint 6.170000e-02

Joint ci ratio: 5.956201e-02	ci left: 5.653318e-02	ci right 6.001784e-02	k: 4078	n:70000
Cons ci ratio: 1.188049e-01	ci left: 1.440371e-02	ci right 1.623679e-02	k: 1071	n:70000
KS ci ratio: 2.106581e-02	ci left: 3.274569e-01	ci right 3.344428e-01	k: 23166	n:70000
ARID1B   70000 perm   28 sec   (2484 perm/sec)   p_kst 3.309429e-01   p_cons 1.530000e-02   p_joint 5.825714e-02

Joint ci ratio: 5.176465e-02	ci left: 6.515345e-02	ci right 6.862804e-02	k: 5350	n:80000
Cons ci ratio: 1.109089e-01	ci left: 1.452160e-02	ci right 1.623881e-02	k: 1229	n:80000
KS ci ratio: 1.967891e-02	ci left: 3.282752e-01	ci right 3.348120e-01	k: 26523	n:80000
ARID1B   80000 perm   32 sec   (2494 perm/sec)   p_kst 3.315375e-01   p_cons 1.536250e-02   p_joint 6.687500e-02

Joint ci ratio: 5.566577e-02	ci left: 5.076668e-02	ci right 5.368449e-02	k: 4699	n:90000
Cons ci ratio: 1.045948e-01	ci left: 1.456231e-02	ci right 1.618026e-02	k: 1382	n:90000
KS ci ratio: 1.852721e-02	ci left: 3.290895e-01	ci right 3.352547e-01	k: 29895	n:90000
ARID1B   90000 perm   36 sec   (2501 perm/sec)   p_kst 3.321667e-01   p_cons 1.535556e-02   p_joint 5.221111e-02

Joint ci ratio: 4.847055e-02	ci left: 5.990007e-02	ci right 6.288543e-02	k: 6138	n:100000
Cons ci ratio: 9.957894e-02	ci left: 1.449955e-02	ci right 1.602875e-02	k: 1525	n:100000
KS ci ratio: 1.756567e-02	ci left: 3.295201e-01	ci right 3.353696e-01	k: 33244	n:100000
ARID1B   100000 perm   40 sec   (2498 perm/sec)   p_kst 3.324400e-01   p_cons 1.525000e-02   p_joint 6.138000e-02

Outputting figure to mutsig2_images.part000000000010/ARID1B.6_6830_100000_0.33244_0.01525_0.06138.png
                gene_name: ARID1B
               theta_stop: 0.100 
                    nperm: 100000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.015 
      ci_cons_bounds_left: 0.014 
     ci_cons_bounds_right: 0.016 
                  p_joint: 0.061 
     ci_joint_bounds_left: 0.060 
    ci_joint_bounds_right: 0.063 

Current progress: 17 percent done.
ARFGEF2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.927855e-01	ci left: 3.586235e-02	ci right 4.360871e-02	k: 396	n:10000
Cons ci ratio: 1.149354e-02	ci left: 9.154367e-01	ci right 9.261167e-01	k: 9209	n:10000
KS ci ratio: 4.090336e-01	ci left: 7.243098e-03	ci right 1.105110e-02	k: 90	n:10000
ARFGEF2   10000 perm   3 sec   (3881 perm/sec)   p_kst 9.000000e-03   p_cons 9.209000e-01   p_joint 3.960000e-02

Joint ci ratio: 2.646529e-01	ci left: 9.413987e-03	ci right 1.233084e-02	k: 216	n:20000
Cons ci ratio: 8.266727e-03	ci left: 9.144689e-01	ci right 9.221090e-01	k: 18367	n:20000
KS ci ratio: 3.086535e-01	ci left: 6.766163e-03	ci right 9.280034e-03	k: 159	n:20000
ARFGEF2   20000 perm   5 sec   (3637 perm/sec)   p_kst 7.950000e-03   p_cons 9.183500e-01   p_joint 1.080000e-02

Joint ci ratio: 2.244287e-01	ci left: 8.936542e-03	ci right 1.122650e-02	k: 301	n:30000
Cons ci ratio: 6.748546e-03	ci left: 9.152110e-01	ci right 9.214411e-01	k: 27551	n:30000
KS ci ratio: 2.536194e-01	ci left: 6.898193e-03	ci right 8.932175e-03	k: 236	n:30000
ARFGEF2   30000 perm   8 sec   (3538 perm/sec)   p_kst 7.866667e-03   p_cons 9.183667e-01   p_joint 1.003333e-02

Joint ci ratio: 1.849973e-01	ci left: 1.007253e-02	ci right 1.214936e-02	k: 443	n:40000
Cons ci ratio: 5.844863e-03	ci left: 9.156235e-01	ci right 9.210156e-01	k: 36734	n:40000
KS ci ratio: 2.139160e-01	ci left: 7.434246e-03	ci right 9.238224e-03	k: 332	n:40000
ARFGEF2   40000 perm   12 sec   (3395 perm/sec)   p_kst 8.300000e-03   p_cons 9.183500e-01   p_joint 1.107500e-02

Joint ci ratio: 1.827300e-01	ci left: 8.286262e-03	ci right 9.971469e-03	k: 455	n:50000
Cons ci ratio: 5.232227e-03	ci left: 9.157837e-01	ci right 9.206076e-01	k: 45911	n:50000
KS ci ratio: 1.909285e-01	ci left: 7.561520e-03	ci right 9.176339e-03	k: 417	n:50000
ARFGEF2   50000 perm   15 sec   (3302 perm/sec)   p_kst 8.340000e-03   p_cons 9.182200e-01   p_joint 9.100000e-03

Joint ci ratio: 1.660757e-01	ci left: 8.435560e-03	ci right 9.979140e-03	k: 551	n:60000
Cons ci ratio: 4.777449e-03	ci left: 9.159616e-01	ci right 9.203645e-01	k: 55091	n:60000
KS ci ratio: 1.740486e-01	ci left: 7.653365e-03	ci right 9.128114e-03	k: 502	n:60000
ARFGEF2   60000 perm   18 sec   (3252 perm/sec)   p_kst 8.366667e-03   p_cons 9.181833e-01   p_joint 9.183333e-03

Joint ci ratio: 1.541191e-01	ci left: 8.451028e-03	ci right 9.875819e-03	k: 640	n:70000
Cons ci ratio: 4.441002e-03	ci left: 9.155096e-01	ci right 9.195985e-01	k: 64230	n:70000
KS ci ratio: 1.589446e-01	ci left: 7.929261e-03	ci right 9.311934e-03	k: 602	n:70000
ARFGEF2   70000 perm   22 sec   (3216 perm/sec)   p_kst 8.600000e-03   p_cons 9.175714e-01   p_joint 9.142857e-03

Joint ci ratio: 1.424647e-01	ci left: 8.706735e-03	ci right 1.005420e-02	k: 749	n:80000
Cons ci ratio: 4.148555e-03	ci left: 9.158500e-01	ci right 9.196697e-01	k: 73422	n:80000
KS ci ratio: 1.494624e-01	ci left: 7.887511e-03	ci right 9.173512e-03	k: 681	n:80000
ARFGEF2   80000 perm   25 sec   (3178 perm/sec)   p_kst 8.512500e-03   p_cons 9.177750e-01   p_joint 9.362500e-03

Joint ci ratio: 1.335800e-01	ci left: 8.844316e-03	ci right 1.012093e-02	k: 852	n:90000
Cons ci ratio: 3.907745e-03	ci left: 9.160987e-01	ci right 9.196965e-01	k: 82612	n:90000
KS ci ratio: 1.400201e-01	ci left: 8.028519e-03	ci right 9.247913e-03	k: 776	n:90000
ARFGEF2   90000 perm   29 sec   (3138 perm/sec)   p_kst 8.622222e-03   p_cons 9.179111e-01   p_joint 9.466667e-03

Joint ci ratio: 9.179348e-02	ci left: 1.708723e-02	ci right 1.874090e-02	k: 1790	n:100000
Cons ci ratio: 3.717053e-03	ci left: 9.157877e-01	ci right 9.192080e-01	k: 91751	n:100000
KS ci ratio: 1.335650e-01	ci left: 7.969307e-03	ci right 9.119471e-03	k: 853	n:100000
ARFGEF2   100000 perm   32 sec   (3092 perm/sec)   p_kst 8.530000e-03   p_cons 9.175100e-01   p_joint 1.790000e-02

Joint ci ratio: 9.046764e-02	ci left: 1.602205e-02	ci right 1.754904e-02	k: 1845	n:110000
Cons ci ratio: 3.543654e-03	ci left: 9.158861e-01	ci right 9.191464e-01	k: 100928	n:110000
KS ci ratio: 1.265635e-01	ci left: 8.097997e-03	ci right 9.200871e-03	k: 950	n:110000
ARFGEF2   110000 perm   36 sec   (3052 perm/sec)   p_kst 8.636364e-03   p_cons 9.175273e-01   p_joint 1.677273e-02

Joint ci ratio: 8.403887e-02	ci left: 1.705939e-02	ci right 1.856404e-02	k: 2136	n:120000
Cons ci ratio: 3.391336e-03	ci left: 9.160215e-01	ci right 9.191416e-01	k: 110111	n:120000
KS ci ratio: 1.219157e-01	ci left: 8.020648e-03	ci right 9.069976e-03	k: 1024	n:120000
ARFGEF2   120000 perm   40 sec   (3018 perm/sec)   p_kst 8.533333e-03   p_cons 9.175917e-01   p_joint 1.780000e-02

Joint ci ratio: 8.482685e-02	ci left: 1.547551e-02	ci right 1.685388e-02	k: 2100	n:130000
Cons ci ratio: 3.260753e-03	ci left: 9.159680e-01	ci right 9.189672e-01	k: 119272	n:130000
KS ci ratio: 1.170487e-01	ci left: 8.052916e-03	ci right 9.061497e-03	k: 1111	n:130000
ARFGEF2   130000 perm   44 sec   (2984 perm/sec)   p_kst 8.546154e-03   p_cons 9.174769e-01   p_joint 1.615385e-02

Joint ci ratio: 9.164447e-02	ci left: 1.230845e-02	ci right 1.349756e-02	k: 1805	n:140000
Cons ci ratio: 3.142099e-03	ci left: 9.160250e-01	ci right 9.189148e-01	k: 128447	n:140000
KS ci ratio: 1.118313e-01	ci left: 8.213221e-03	ci right 9.193004e-03	k: 1217	n:140000
ARFGEF2   140000 perm   47 sec   (2948 perm/sec)   p_kst 8.692857e-03   p_cons 9.174786e-01   p_joint 1.289286e-02

Joint ci ratio: 8.891012e-02	ci left: 1.222419e-02	ci right 1.336809e-02	k: 1918	n:150000
Cons ci ratio: 3.035255e-03	ci left: 9.160896e-01	ci right 9.188809e-01	k: 137624	n:150000
KS ci ratio: 1.080811e-01	ci left: 8.223242e-03	ci right 9.169229e-03	k: 1303	n:150000
ARFGEF2   150000 perm   51 sec   (2913 perm/sec)   p_kst 8.686667e-03   p_cons 9.174933e-01   p_joint 1.278667e-02

Joint ci ratio: 8.559963e-02	ci left: 1.238338e-02	ci right 1.349687e-02	k: 2069	n:160000
Cons ci ratio: 2.940558e-03	ci left: 9.160468e-01	ci right 9.187506e-01	k: 146785	n:160000
KS ci ratio: 1.044574e-01	ci left: 8.269018e-03	ci right 9.186417e-03	k: 1395	n:160000
ARFGEF2   160000 perm   56 sec   (2879 perm/sec)   p_kst 8.718750e-03   p_cons 9.174062e-01   p_joint 1.293125e-02

Joint ci ratio: 8.287937e-02	ci left: 1.244963e-02	ci right 1.353178e-02	k: 2207	n:170000
Cons ci ratio: 2.853870e-03	ci left: 9.160280e-01	ci right 9.186518e-01	k: 155949	n:170000
KS ci ratio: 1.010725e-01	ci left: 8.327079e-03	ci right 9.219206e-03	k: 1490	n:170000
ARFGEF2   170000 perm   60 sec   (2846 perm/sec)   p_kst 8.764706e-03   p_cons 9.173471e-01   p_joint 1.298235e-02

Joint ci ratio: 9.343794e-02	ci left: 9.230651e-03	ci right 1.014080e-02	k: 1742	n:180000
Cons ci ratio: 2.772897e-03	ci left: 9.160964e-01	ci right 9.186457e-01	k: 165128	n:180000
KS ci ratio: 9.843598e-02	ci left: 8.303232e-03	ci right 9.168258e-03	k: 1571	n:180000
ARFGEF2   180000 perm   64 sec   (2812 perm/sec)   p_kst 8.727778e-03   p_cons 9.173778e-01   p_joint 9.677778e-03

Outputting figure to mutsig2_images.part000000000010/ARFGEF2.4_5514_180000_0.0087278_0.91738_0.0096778.png
                gene_name: ARFGEF2
               theta_stop: 0.098 
                    nperm: 180000 
                     p_ks: 0.0087 
        ci_ks_bounds_left: 0.0083 
       ci_ks_bounds_right: 0.0092 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.92 
                  p_joint: 0.0097 
     ci_joint_bounds_left: 0.0092 
    ci_joint_bounds_right: 0.010 

Current progress: 33 percent done.
ARFIP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.508864e-02	ci left: 8.642720e-01	ci right 8.775111e-01	k: 8710	n:10000
Cons ci ratio: 3.682802e-02	ci left: 5.212613e-01	ci right 5.409206e-01	k: 5311	n:10000
KS ci ratio: 2.159954e-02	ci left: 7.586885e-01	ci right 7.753556e-01	k: 7671	n:10000
ARFIP2   10000 perm   2 sec   (6382 perm/sec)   p_kst 7.671000e-01   p_cons 5.311000e-01   p_joint 8.710000e-01

Outputting figure to mutsig2_images.part000000000010/ARFIP2.2_1054_10000_0.7671_0.5311_0.871.png
                gene_name: ARFIP2
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.53 
      ci_cons_bounds_left: 0.52 
     ci_cons_bounds_right: 0.54 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.86 
    ci_joint_bounds_right: 0.88 

Current progress: 50 percent done.
ARHGAP26
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.301240e-02	ci left: 8.947738e-01	ci right 9.065916e-01	k: 9008	n:10000
Cons ci ratio: 2.013206e-02	ci left: 7.832008e-01	ci right 7.992292e-01	k: 7913	n:10000
KS ci ratio: 2.663008e-02	ci left: 6.749868e-01	ci right 6.933059e-01	k: 6842	n:10000
ARHGAP26   10000 perm   2 sec   (5650 perm/sec)   p_kst 6.842000e-01   p_cons 7.913000e-01   p_joint 9.008000e-01

Outputting figure to mutsig2_images.part000000000010/ARHGAP26.2_2537_10000_0.6842_0.7913_0.9008.png
                gene_name: ARHGAP26
               theta_stop: 0.027 
                    nperm: 10000 
                     p_ks: 0.68 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.69 
                   p_cons: 0.79 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.80 
                  p_joint: 0.90 
     ci_joint_bounds_left: 0.89 
    ci_joint_bounds_right: 0.91 

Current progress: 67 percent done.
ARHGEF10L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.220940e-02	ci left: 7.484697e-01	ci right 7.653804e-01	k: 7570	n:10000
KS ci ratio: 1.072702e-02	ci left: 9.252359e-01	ci right 9.353117e-01	k: 9304	n:10000
ARHGEF10L   10000 perm   2 sec   (4913 perm/sec)   p_kst 9.304000e-01   p_cons 7.570000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000010/ARHGEF10L.2_3952_10000_0.9304_0.757_1.png
                gene_name: ARHGEF10L
               theta_stop: 0.022 
                    nperm: 10000 
                     p_ks: 0.93 
        ci_ks_bounds_left: 0.93 
       ci_ks_bounds_right: 0.94 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.75 
     ci_cons_bounds_right: 0.77 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
ARHGEF7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.844091e-02	ci left: 6.456895e-01	ci right 6.644201e-01	k: 6551	n:10000
Cons ci ratio: 6.202778e-02	ci left: 2.764632e-01	ci right 2.942620e-01	k: 2853	n:10000
KS ci ratio: 1.452325e-01	ci left: 6.294902e-02	ci right 7.290448e-02	k: 678	n:10000
ARHGEF7   10000 perm   2 sec   (5540 perm/sec)   p_kst 6.780000e-02   p_cons 2.853000e-01   p_joint 6.551000e-01

Joint ci ratio: 1.182691e-02	ci left: 8.409224e-01	ci right 8.509768e-01	k: 16920	n:20000
Cons ci ratio: 4.393587e-02	ci left: 2.784028e-01	ci right 2.909598e-01	k: 5693	n:20000
KS ci ratio: 1.034344e-01	ci left: 6.352427e-02	ci right 7.050225e-02	k: 1339	n:20000
ARHGEF7   20000 perm   4 sec   (4912 perm/sec)   p_kst 6.695000e-02   p_cons 2.846500e-01   p_joint 8.460000e-01

Joint ci ratio: 9.801773e-03	ci left: 8.378903e-01	ci right 8.461767e-01	k: 25262	n:30000
Cons ci ratio: 3.589705e-02	ci left: 2.792995e-01	ci right 2.895423e-01	k: 8532	n:30000
KS ci ratio: 8.486246e-02	ci left: 6.357533e-02	ci right 6.924233e-02	k: 1991	n:30000
ARHGEF7   30000 perm   6 sec   (4622 perm/sec)   p_kst 6.636667e-02   p_cons 2.844000e-01   p_joint 8.420667e-01

Outputting figure to mutsig2_images.part000000000010/ARHGEF7.2_2782_30000_0.066367_0.2844_0.84207.png
                gene_name: ARHGEF7
               theta_stop: 0.085 
                    nperm: 30000 
                     p_ks: 0.066 
        ci_ks_bounds_left: 0.064 
       ci_ks_bounds_right: 0.069 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.28 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.84 
     ci_joint_bounds_left: 0.84 
    ci_joint_bounds_right: 0.85 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000010
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 10 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1714>
Subject: Job 8704108: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1714>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000011> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:34:43 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000011.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000011.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 11  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000011.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    190.59 sec.
    Max Memory :      5707 MB
    Max Swap   :      8469 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
11
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 11
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 11: processing genes 906 - 995
Calculating significance of each gene.
Using projection method.
906	ARID2	1.372327e-01
907	ARID3A	1.804613e-01
908	ARID3B	1.925583e-01
909	ARID3C	1
910	ARID4A	1
911	ARID4B	1
912	ARID5A	1
913	ARID5B	3.101424e-01
914	ARIH1	1
915	ARIH2	1
916	ARL1	1
917	ARL10	1
918	ARL11	1
919	ARL13A	1
920	ARL13B	1
921	ARL14	1
922	ARL15	1
923	ARL16	1
924	ARL2	1
925	ARL2BP	1
926	ARL3	3.627847e-02
927	ARL4A	1
928	ARL4C	1
929	ARL4D	1
930	ARL5A	1
931	ARL5B	1
932	ARL6	1
933	ARL6IP1	1
934	ARL6IP4	1
935	ARL6IP5	1
936	ARL6IP6	1
937	ARL8A	1
938	ARL8B	1
939	ARL9	1
940	ARMC1	1.247472e-01
941	ARMC10	1
942	ARMC2	1.992341e-01
943	ARMC3	2.738924e-01
944	ARMC4	1
945	ARMC5	1
946	ARMC6	1
947	ARMC7	1
948	ARMC8	6.449291e-02
949	ARMC9	1
950	ARMCX1	1.368342e-01
951	ARMCX2	2.438407e-01
952	ARMCX3	2.573947e-04
953	ARMCX5	1
954	ARMCX6	1
955	ARMS2	1
956	ARNT	1
957	ARNT2	1
958	ARNTL	1
959	ARNTL2	1
960	ARPC1A	1
961	ARPC1B	1
962	ARPC2	1
963	ARPC3	1
964	ARPC4	1
965	ARPC5	1
966	ARPC5L	1
967	ARPM1	1
968	ARPP19	1
969	ARPP21	1
970	ARR3	1
971	ARRB1	1.675293e-01
972	ARRB2	1
973	ARRDC1	1
974	ARRDC2	2.113584e-01
975	ARRDC3	1
976	ARRDC4	1
977	ARRDC5	8.061678e-02
978	ARSA	1
979	ARSB	1
980	ARSD	1
981	ARSE	2.506071e-01
982	ARSF	2.429215e-01
983	ARSG	1
984	ARSH	3.420350e-02
985	ARSI	2.086849e-01
986	ARSJ	1
987	ARSK	1.451113e-01
988	ART1	1
989	ART3	1
990	ART4	1
991	ART5	1
992	ARTN	1
993	ARV1	1
994	ARVCF	1.452938e-02
995	ARX	1.340557e-03
Done

Running MutSig 2:
Scatter job 11: processing genes 906 - 995
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ARMCX3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.067577e-01	ci left: 1.124225e-01	ci right 1.252005e-01	k: 1187	n:10000
Cons ci ratio: 1.392492e-02	ci left: 8.816556e-01	ci right 8.941174e-01	k: 8880	n:10000
KS ci ratio: 1.714031e-01	ci left: 4.542628e-02	ci right 5.403844e-02	k: 496	n:10000
ARMCX3   10000 perm   2 sec   (6092 perm/sec)   p_kst 4.960000e-02   p_cons 8.880000e-01   p_joint 1.187000e-01

Joint ci ratio: 7.439322e-02	ci left: 1.173467e-01	ci right 1.264635e-01	k: 2437	n:20000
Cons ci ratio: 1.025137e-02	ci left: 8.751112e-01	ci right 8.841781e-01	k: 17594	n:20000
KS ci ratio: 1.250222e-01	ci left: 4.391389e-02	ci right 4.981875e-02	k: 936	n:20000
ARMCX3   20000 perm   8 sec   (2367 perm/sec)   p_kst 4.680000e-02   p_cons 8.797000e-01   p_joint 1.218500e-01

Joint ci ratio: 6.259873e-02	ci left: 1.119696e-01	ci right 1.192383e-01	k: 3467	n:30000
Cons ci ratio: 8.322405e-03	ci left: 8.771811e-01	ci right 8.845449e-01	k: 26427	n:30000
KS ci ratio: 1.002426e-01	ci left: 4.606374e-02	ci right 5.095750e-02	k: 1454	n:30000
ARMCX3   30000 perm   11 sec   (2835 perm/sec)   p_kst 4.846667e-02   p_cons 8.809000e-01   p_joint 1.155667e-01

Joint ci ratio: 4.510622e-02	ci left: 1.552306e-01	ci right 1.624190e-01	k: 6352	n:40000
Cons ci ratio: 6.782349e-03	ci left: 8.900056e-01	ci right 8.960872e-01	k: 35723	n:40000
KS ci ratio: 8.648552e-02	ci left: 4.673343e-02	ci right 5.098237e-02	k: 1953	n:40000
ARMCX3   40000 perm   13 sec   (3065 perm/sec)   p_kst 4.882500e-02   p_cons 8.930750e-01   p_joint 1.588000e-01

Outputting figure to mutsig2_images.part000000000011/ARMCX3.3_1144_40000_0.048825_0.89307_0.1588.png
                gene_name: ARMCX3
               theta_stop: 0.086 
                    nperm: 40000 
                     p_ks: 0.049 
        ci_ks_bounds_left: 0.047 
       ci_ks_bounds_right: 0.051 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.16 

Current progress: 20 percent done.
ARID2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.585553e-02	ci left: 3.206853e-01	ci right 3.392138e-01	k: 3299	n:10000
KS ci ratio: 6.115731e-02	ci left: 2.822084e-01	ci right 3.001135e-01	k: 2911	n:10000
ARID2   10000 perm   2 sec   (4962 perm/sec)   p_kst 2.911000e-01   p_cons 3.299000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000011/ARID2.2_5592_10000_0.2911_0.3299_1.png
                gene_name: ARID2
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.33 
      ci_cons_bounds_left: 0.32 
     ci_cons_bounds_right: 0.34 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 40 percent done.
ARSH
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.751516e-02	ci left: 6.605848e-01	ci right 6.791161e-01	k: 6699	n:10000
Cons ci ratio: 4.623708e-02	ci left: 4.084076e-01	ci right 4.278402e-01	k: 4181	n:10000
KS ci ratio: 3.514628e-02	ci left: 5.444935e-01	ci right 5.640749e-01	k: 5543	n:10000
ARSH   10000 perm   2 sec   (6342 perm/sec)   p_kst 5.543000e-01   p_cons 4.181000e-01   p_joint 6.699000e-01

Outputting figure to mutsig2_images.part000000000011/ARSH.2_1724_10000_0.5543_0.4181_0.6699.png
                gene_name: ARSH
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.55 
        ci_ks_bounds_left: 0.54 
       ci_ks_bounds_right: 0.56 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.67 
     ci_joint_bounds_left: 0.66 
    ci_joint_bounds_right: 0.68 

Current progress: 60 percent done.
ARVCF
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.591030e-02	ci left: 8.516164e-01	ci right 8.653740e-01	k: 8586	n:10000
KS ci ratio: 1.233967e-02	ci left: 9.041181e-01	ci right 9.154419e-01	k: 9099	n:10000
ARVCF   10000 perm   2 sec   (5574 perm/sec)   p_kst 9.099000e-01   p_cons 8.586000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000011/ARVCF.2_2957_10000_0.9099_0.8586_1.png
                gene_name: ARVCF
               theta_stop: 0.016 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.90 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.85 
     ci_cons_bounds_right: 0.87 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 80 percent done.
ARX
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.780486e-02	ci left: 2.419322e-01	ci right 2.590133e-01	k: 2504	n:10000
Cons ci ratio: 7.830018e-02	ci left: 1.924939e-01	ci right 2.082810e-01	k: 2003	n:10000
KS ci ratio: 1.309804e-01	ci left: 7.679184e-02	ci right 8.765300e-02	k: 821	n:10000
ARX   10000 perm   2 sec   (6637 perm/sec)   p_kst 8.210000e-02   p_cons 2.003000e-01   p_joint 2.504000e-01

Joint ci ratio: 3.467717e-02	ci left: 3.830323e-01	ci right 3.965997e-01	k: 7796	n:20000
Cons ci ratio: 5.334358e-02	ci left: 2.068972e-01	ci right 2.182865e-01	k: 4251	n:20000
KS ci ratio: 9.292732e-02	ci left: 7.789098e-02	ci right 8.553115e-02	k: 1633	n:20000
ARX   20000 perm   4 sec   (5450 perm/sec)   p_kst 8.165000e-02   p_cons 2.125500e-01   p_joint 3.898000e-01

Outputting figure to mutsig2_images.part000000000011/ARX.2_1709_20000_0.08165_0.21255_0.3898.png
                gene_name: ARX
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.082 
        ci_ks_bounds_left: 0.078 
       ci_ks_bounds_right: 0.086 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.39 
     ci_joint_bounds_left: 0.38 
    ci_joint_bounds_right: 0.40 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000011
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 11 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1416>
Subject: Job 8704110: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1416>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000012> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 23:02:20 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000012.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000012.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 12  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000012.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  13578.54 sec.
    Max Memory :      5938 MB
    Max Swap   :      8514 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
12
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 12
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 12: processing genes 996 - 1086
Calculating significance of each gene.
Using projection method.
996	AS3MT	1
997	ASAH1	1
998	ASAH2	1
999	ASAM	3.174687e-02
1000/18093 1000	ASAP1	4.032191e-01
1001	ASAP2	3.040089e-01
1002	ASAP3	1
1003	ASB1	1
1004	ASB10	7.380709e-02
1005	ASB11	1
1006	ASB12	1
1007	ASB13	1
1008	ASB14	1
1009	ASB15	1
1010	ASB16	1
1011	ASB17	1
1012	ASB18	1
1013	ASB2	1
1014	ASB3	1
1015	ASB4	1
1016	ASB5	1
1017	ASB6	1
1018	ASB7	1
1019	ASB8	1
1020	ASB9	1
1021	ASCC1	1
1022	ASCC2	1
1023	ASCC3	6.201986e-01
1024	ASCL1	1
1025	ASCL3	1
1026	ASCL4	1
1027	ASF1A	1
1028	ASF1B	1
1029	ASGR1	1
1030	ASGR2	1
1031	ASH1L	4.716633e-02
1032	ASH2L	1
1033	ASIP	1
1034	ASL	1
1035	ASMT	1.577609e-02
1036	ASMTL	1
1037	ASNA1	1
1038	ASNS	1
1039	ASNSD1	1
1040	ASPA	1
1041	ASPDH	1
1042	ASPG	1
1043	ASPH	1
1044	ASPHD1	1
1045	ASPHD2	1
1046	ASPM	1
1047	ASPN	1
1048	ASPRV1	1
1049	ASPSCR1	1
1050	ASRGL1	1.298799e-01
1051	ASS1	1
1052	ASTE1	1
1053	ASTL	1
1054	ASTN1	1
1055	ASTN2	1
1056	ASXL1	3.518728e-01
1057	ASXL2	1
1058	ASXL3	1
1059	ASZ1	1
1060	ATAD1	1
1061	ATAD2	3.842958e-03
1062	ATAD2B	1
1063	ATAD3A	1
1064	ATAD3B	1
1065	ATAD3C	1
1066	ATAD5	3.865601e-01
1067	ATCAY	1
1068	ATE1	1
1069	ATF1	1
1070	ATF2	1
1071	ATF3	1
1072	ATF4	1
1073	ATF5	1
1074	ATF6	1.755164e-01
1075	ATF6B	1.050988e-01
1076	ATF7	1
1077	ATF7IP	1
1078	ATF7IP2	1
1079	ATG10	1
1080	ATG12	1
1081	ATG16L1	1
1082	ATG16L2	3.888960e-02
1083	ATG2A	8.736134e-02
1084	ATG2B	1.836997e-01
1085	ATG3	1
1086	ATG4A	1
Done

Running MutSig 2:
Scatter job 12: processing genes 996 - 1086
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ASH1L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.172504e-02	ci left: 2.784441e-01	ci right 2.962799e-01	k: 2873	n:10000
Cons ci ratio: 9.510880e-02	ci left: 1.382511e-01	ci right 1.521563e-01	k: 1451	n:10000
KS ci ratio: 3.271458e-02	ci left: 5.796832e-01	ci right 5.990647e-01	k: 5894	n:10000
ASH1L   10000 perm   4 sec   (2818 perm/sec)   p_kst 5.894000e-01   p_cons 1.451000e-01   p_joint 2.873000e-01

Outputting figure to mutsig2_images.part000000000012/ASH1L.4_9003_10000_0.5894_0.1451_0.2873.png
                gene_name: ASH1L
               theta_stop: 0.095 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.15 
                  p_joint: 0.29 
     ci_joint_bounds_left: 0.28 
    ci_joint_bounds_right: 0.30 

Current progress: 25 percent done.
ATAD2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.184154e-01	ci left: 6.884481e-03	ci right 1.061018e-02	k: 86	n:10000
Cons ci ratio: 8.552514e-02	ci left: 1.661239e-01	ci right 1.810667e-01	k: 1735	n:10000
KS ci ratio: 1.959510e+00	ci left: 6.187149e-05	ci right 8.764745e-04	k: 3	n:10000
ATAD2   10000 perm   2 sec   (4235 perm/sec)   p_kst 3.000000e-04   p_cons 1.735000e-01   p_joint 8.600000e-03

Joint ci ratio: 5.971366e-01	ci left: 1.513902e-03	ci right 2.837541e-03	k: 42	n:20000
Cons ci ratio: 6.020370e-02	ci left: 1.696083e-01	ci right 1.801863e-01	k: 3497	n:20000
KS ci ratio: 1.752814e+00	ci left: 5.449587e-05	ci right 5.119995e-04	k: 4	n:20000
ATAD2   20000 perm   5 sec   (3786 perm/sec)   p_kst 2.000000e-04   p_cons 1.748500e-01   p_joint 2.100000e-03

Joint ci ratio: 3.632525e-01	ci left: 3.165816e-03	ci right 4.599568e-03	k: 115	n:30000
Cons ci ratio: 5.024515e-02	ci left: 1.644119e-01	ci right 1.729190e-01	k: 5059	n:30000
KS ci ratio: 1.481423e+00	ci left: 7.339990e-05	ci right 4.352646e-04	k: 6	n:30000
ATAD2   30000 perm   8 sec   (3711 perm/sec)   p_kst 2.000000e-04   p_cons 1.686333e-01   p_joint 3.833333e-03

Joint ci ratio: 3.486666e-01	ci left: 2.601872e-03	ci right 3.722182e-03	k: 125	n:40000
Cons ci ratio: 4.346590e-02	ci left: 1.652896e-01	ci right 1.726586e-01	k: 6758	n:40000
KS ci ratio: 1.306503e+00	ci left: 8.634963e-05	ci right 3.940415e-04	k: 8	n:40000
ATAD2   40000 perm   11 sec   (3660 perm/sec)   p_kst 2.000000e-04   p_cons 1.689500e-01   p_joint 3.125000e-03

Joint ci ratio: 4.463769e-01	ci left: 1.197768e-03	ci right 1.902143e-03	k: 76	n:50000
Cons ci ratio: 3.913029e-02	ci left: 1.638791e-01	ci right 1.704396e-01	k: 8357	n:50000
KS ci ratio: 1.239476e+00	ci left: 8.231066e-05	ci right 3.416684e-04	k: 9	n:50000
ATAD2   50000 perm   14 sec   (3601 perm/sec)   p_kst 1.800000e-04   p_cons 1.671400e-01   p_joint 1.520000e-03

Joint ci ratio: 4.299746e-01	ci left: 1.087094e-03	ci right 1.696114e-03	k: 82	n:60000
Cons ci ratio: 3.579510e-02	ci left: 1.635932e-01	ci right 1.695724e-01	k: 9994	n:60000
KS ci ratio: 1.131484e+00	ci left: 9.152278e-05	ci right 3.280102e-04	k: 11	n:60000
ATAD2   60000 perm   17 sec   (3542 perm/sec)   p_kst 1.833333e-04   p_cons 1.665667e-01   p_joint 1.366667e-03

Joint ci ratio: 4.716765e-01	ci left: 7.544288e-04	ci right 1.231357e-03	k: 68	n:70000
Cons ci ratio: 3.305626e-02	ci left: 1.645133e-01	ci right 1.700571e-01	k: 11709	n:70000
KS ci ratio: 1.012024e+00	ci left: 1.093460e-04	ci right 3.355433e-04	k: 14	n:70000
ATAD2   70000 perm   20 sec   (3473 perm/sec)   p_kst 2.000000e-04   p_cons 1.672714e-01   p_joint 9.714286e-04

Joint ci ratio: 4.408139e-01	ci left: 7.707710e-04	ci right 1.216697e-03	k: 78	n:80000
Cons ci ratio: 3.081610e-02	ci left: 1.656387e-01	ci right 1.708354e-01	k: 13458	n:80000
KS ci ratio: 1.012038e+00	ci left: 9.567733e-05	ci right 2.936028e-04	k: 14	n:80000
ATAD2   80000 perm   23 sec   (3425 perm/sec)   p_kst 1.750000e-04   p_cons 1.682250e-01   p_joint 9.750000e-04

Joint ci ratio: 5.190494e-01	ci left: 4.700531e-04	ci right 8.079322e-04	k: 56	n:90000
Cons ci ratio: 2.900005e-02	ci left: 1.663027e-01	ci right 1.712075e-01	k: 15187	n:90000
KS ci ratio: 9.506446e-01	ci left: 1.016187e-04	ci right 2.886840e-04	k: 16	n:90000
ATAD2   90000 perm   27 sec   (3353 perm/sec)   p_kst 1.777778e-04   p_cons 1.687444e-01   p_joint 6.222222e-04

Joint ci ratio: 5.145694e-01	ci left: 4.317401e-04	ci right 7.384389e-04	k: 57	n:100000
Cons ci ratio: 2.748597e-02	ci left: 1.666919e-01	ci right 1.713473e-01	k: 16901	n:100000
KS ci ratio: 8.764466e-01	ci left: 1.143962e-04	ci right 2.966927e-04	k: 19	n:100000
ATAD2   100000 perm   30 sec   (3296 perm/sec)   p_kst 1.900000e-04   p_cons 1.690100e-01   p_joint 5.700000e-04

Joint ci ratio: 4.823717e-01	ci left: 4.560798e-04	ci right 7.531010e-04	k: 65	n:110000
Cons ci ratio: 2.557303e-02	ci left: 1.737536e-01	ci right 1.782635e-01	k: 19360	n:110000
KS ci ratio: 8.172873e-01	ci left: 1.253430e-04	ci right 3.027868e-04	k: 22	n:110000
ATAD2   110000 perm   34 sec   (3227 perm/sec)   p_kst 2.000000e-04   p_cons 1.760000e-01   p_joint 5.909091e-04

Joint ci ratio: 6.532326e-01	ci left: 2.031647e-04	ci right 4.056146e-04	k: 35	n:120000
Cons ci ratio: 2.453515e-02	ci left: 1.732519e-01	ci right 1.775638e-01	k: 21048	n:120000
KS ci ratio: 7.686888e-01	ci left: 1.348267e-04	ci right 3.075258e-04	k: 25	n:120000
ATAD2   120000 perm   38 sec   (3192 perm/sec)   p_kst 2.083333e-04   p_cons 1.754000e-01   p_joint 2.916667e-04

Joint ci ratio: 7.039661e-01	ci left: 1.557043e-04	ci right 3.294212e-04	k: 30	n:130000
Cons ci ratio: 2.423741e-02	ci left: 1.654737e-01	ci right 1.695412e-01	k: 21775	n:130000
KS ci ratio: 7.543231e-01	ci left: 1.306507e-04	ci right 2.930327e-04	k: 26	n:130000
ATAD2   130000 perm   41 sec   (3153 perm/sec)   p_kst 2.000000e-04   p_cons 1.675000e-01   p_joint 2.307692e-04

Joint ci ratio: 6.928830e-01	ci left: 1.504548e-04	ci right 3.142856e-04	k: 31	n:140000
Cons ci ratio: 2.338995e-02	ci left: 1.651420e-01	ci right 1.690575e-01	k: 23393	n:140000
KS ci ratio: 7.407336e-01	ci left: 1.270978e-04	ci right 2.805847e-04	k: 27	n:140000
ATAD2   140000 perm   45 sec   (3113 perm/sec)   p_kst 1.928571e-04   p_cons 1.670929e-01   p_joint 2.214286e-04

Joint ci ratio: 6.928884e-01	ci left: 1.404242e-04	ci right 2.933341e-04	k: 31	n:150000
Cons ci ratio: 2.261255e-02	ci left: 1.650161e-01	ci right 1.687968e-01	k: 25035	n:150000
KS ci ratio: 7.278529e-01	ci left: 1.240421e-04	ci right 2.697741e-04	k: 28	n:150000
ATAD2   150000 perm   49 sec   (3074 perm/sec)   p_kst 1.866667e-04   p_cons 1.669000e-01   p_joint 2.066667e-04

Joint ci ratio: 5.191226e-01	ci left: 2.643967e-04	ci right 4.544804e-04	k: 56	n:160000
Cons ci ratio: 2.190636e-02	ci left: 1.649265e-01	ci right 1.685856e-01	k: 26680	n:160000
KS ci ratio: 6.625264e-01	ci left: 1.471668e-04	ci right 2.969349e-04	k: 34	n:160000
ATAD2   160000 perm   53 sec   (3036 perm/sec)   p_kst 2.125000e-04   p_cons 1.667500e-01   p_joint 3.500000e-04

Joint ci ratio: 5.191281e-01	ci left: 2.488434e-04	ci right 4.277475e-04	k: 56	n:170000
Cons ci ratio: 2.123367e-02	ci left: 1.652239e-01	ci right 1.687757e-01	k: 28389	n:170000
KS ci ratio: 6.532622e-01	ci left: 1.434087e-04	ci right 2.863210e-04	k: 35	n:170000
ATAD2   170000 perm   57 sec   (3000 perm/sec)   p_kst 2.058824e-04   p_cons 1.669941e-01   p_joint 3.294118e-04

Joint ci ratio: 4.937858e-01	ci left: 2.640935e-04	ci right 4.415408e-04	k: 62	n:180000
Cons ci ratio: 2.062718e-02	ci left: 1.653847e-01	ci right 1.688372e-01	k: 30079	n:180000
KS ci ratio: 6.443760e-01	ci left: 1.400813e-04	ci right 2.768737e-04	k: 36	n:180000
ATAD2   180000 perm   61 sec   (2964 perm/sec)   p_kst 2.000000e-04   p_cons 1.671056e-01   p_joint 3.444444e-04

Joint ci ratio: 6.722125e-01	ci left: 1.195591e-04	ci right 2.439086e-04	k: 33	n:190000
Cons ci ratio: 2.008999e-02	ci left: 1.652520e-01	ci right 1.686108e-01	k: 31716	n:190000
KS ci ratio: 6.929045e-01	ci left: 1.108605e-04	ci right 2.315817e-04	k: 31	n:190000
ATAD2   190000 perm   65 sec   (2929 perm/sec)   p_kst 1.631579e-04   p_cons 1.669263e-01   p_joint 1.736842e-04

Joint ci ratio: 6.443828e-01	ci left: 1.260729e-04	ci right 2.491873e-04	k: 36	n:200000
Cons ci ratio: 1.958387e-02	ci left: 1.652582e-01	ci right 1.685315e-01	k: 33378	n:200000
KS ci ratio: 6.823264e-01	ci left: 1.094424e-04	ci right 2.258648e-04	k: 32	n:200000
ATAD2   200000 perm   69 sec   (2895 perm/sec)   p_kst 1.600000e-04   p_cons 1.668900e-01   p_joint 1.800000e-04

Joint ci ratio: 6.358489e-01	ci left: 1.240573e-04	ci right 2.428473e-04	k: 37	n:210000
Cons ci ratio: 1.912434e-02	ci left: 1.651176e-01	ci right 1.683106e-01	k: 35009	n:210000
KS ci ratio: 6.625441e-01	ci left: 1.121263e-04	ci right 2.262384e-04	k: 34	n:210000
ATAD2   210000 perm   73 sec   (2860 perm/sec)   p_kst 1.619048e-04   p_cons 1.667095e-01   p_joint 1.761905e-04

Joint ci ratio: 6.276453e-01	ci left: 1.222349e-04	ci right 2.370740e-04	k: 38	n:220000
Cons ci ratio: 1.869355e-02	ci left: 1.650224e-01	ci right 1.681409e-01	k: 36647	n:220000
KS ci ratio: 6.443884e-01	ci left: 1.146114e-04	ci right 2.265346e-04	k: 36	n:220000
ATAD2   220000 perm   78 sec   (2827 perm/sec)   p_kst 1.636364e-04   p_cons 1.665773e-01   p_joint 1.727273e-04

Joint ci ratio: 5.977372e-01	ci left: 1.316114e-04	ci right 2.468260e-04	k: 42	n:230000
Cons ci ratio: 1.828003e-02	ci left: 1.650965e-01	ci right 1.681466e-01	k: 38322	n:230000
KS ci ratio: 6.358541e-01	ci left: 1.132695e-04	ci right 2.217308e-04	k: 37	n:230000
ATAD2   230000 perm   82 sec   (2794 perm/sec)   p_kst 1.608696e-04   p_cons 1.666174e-01   p_joint 1.826087e-04

Joint ci ratio: 2.366801e-01	ci left: 1.006620e-03	ci right 1.280657e-03	k: 273	n:240000
Cons ci ratio: 1.789466e-02	ci left: 1.651361e-01	ci right 1.681220e-01	k: 39990	n:240000
KS ci ratio: 6.276501e-01	ci left: 1.120485e-04	ci right 2.173185e-04	k: 38	n:240000
ATAD2   240000 perm   87 sec   (2759 perm/sec)   p_kst 1.583333e-04   p_cons 1.666250e-01   p_joint 1.137500e-03

Joint ci ratio: 2.411314e-01	ci left: 9.287443e-04	ci right 1.187048e-03	k: 263	n:250000
Cons ci ratio: 1.752915e-02	ci left: 1.652289e-01	ci right 1.681548e-01	k: 41672	n:250000
KS ci ratio: 6.276521e-01	ci left: 1.075664e-04	ci right 2.086260e-04	k: 38	n:250000
ATAD2   250000 perm   92 sec   (2724 perm/sec)   p_kst 1.520000e-04   p_cons 1.666880e-01   p_joint 1.052000e-03

Joint ci ratio: 2.375601e-01	ci left: 9.219471e-04	ci right 1.174004e-03	k: 271	n:260000
Cons ci ratio: 1.719421e-02	ci left: 1.651695e-01	ci right 1.680379e-01	k: 43316	n:260000
KS ci ratio: 6.121517e-01	ci left: 1.099122e-04	ci right 2.094890e-04	k: 40	n:260000
ATAD2   260000 perm   97 sec   (2689 perm/sec)   p_kst 1.538462e-04   p_cons 1.666000e-01   p_joint 1.042308e-03

Joint ci ratio: 2.371288e-01	ci left: 8.912826e-04	ci right 1.134448e-03	k: 272	n:270000
Cons ci ratio: 1.687618e-02	ci left: 1.651409e-01	ci right 1.679552e-01	k: 44967	n:270000
KS ci ratio: 6.048210e-01	ci left: 1.089736e-04	ci right 2.059986e-04	k: 41	n:270000
ATAD2   270000 perm   102 sec   (2659 perm/sec)   p_kst 1.518519e-04   p_cons 1.665444e-01   p_joint 1.007407e-03

Joint ci ratio: 2.345669e-01	ci left: 8.796129e-04	ci right 1.116625e-03	k: 278	n:280000
Cons ci ratio: 1.657772e-02	ci left: 1.650720e-01	ci right 1.678349e-01	k: 46606	n:280000
KS ci ratio: 6.048227e-01	ci left: 1.050817e-04	ci right 1.986417e-04	k: 41	n:280000
ATAD2   280000 perm   107 sec   (2628 perm/sec)   p_kst 1.464286e-04   p_cons 1.664500e-01   p_joint 9.928571e-04

Joint ci ratio: 2.304729e-01	ci left: 8.817557e-04	ci right 1.114609e-03	k: 288	n:290000
Cons ci ratio: 1.628950e-02	ci left: 1.650942e-01	ci right 1.678090e-01	k: 48270	n:290000
KS ci ratio: 6.048243e-01	ci left: 1.014581e-04	ci right 1.917922e-04	k: 41	n:290000
ATAD2   290000 perm   112 sec   (2598 perm/sec)   p_kst 1.413793e-04   p_cons 1.664483e-01   p_joint 9.931034e-04

Joint ci ratio: 2.300787e-01	ci left: 8.555035e-04	ci right 1.080982e-03	k: 289	n:300000
Cons ci ratio: 1.601812e-02	ci left: 1.650755e-01	ci right 1.677443e-01	k: 49922	n:300000
KS ci ratio: 6.048258e-01	ci left: 9.807609e-05	ci right 1.853992e-04	k: 41	n:300000
ATAD2   300000 perm   117 sec   (2570 perm/sec)   p_kst 1.366667e-04   p_cons 1.664067e-01   p_joint 9.633333e-04

Joint ci ratio: 2.250877e-01	ci left: 8.674523e-04	ci right 1.090433e-03	k: 302	n:310000
Cons ci ratio: 1.575327e-02	ci left: 1.651741e-01	ci right 1.677999e-01	k: 51610	n:310000
KS ci ratio: 5.977520e-01	ci left: 9.764655e-05	ci right 1.831305e-04	k: 42	n:310000
ATAD2   310000 perm   122 sec   (2541 perm/sec)   p_kst 1.354839e-04   p_cons 1.664839e-01   p_joint 9.741935e-04

Joint ci ratio: 2.228930e-01	ci left: 8.580419e-04	ci right 1.076158e-03	k: 308	n:320000
Cons ci ratio: 1.550305e-02	ci left: 1.652325e-01	ci right 1.678172e-01	k: 53287	n:320000
KS ci ratio: 5.909207e-01	ci left: 9.724951e-05	ci right 1.809980e-04	k: 43	n:320000
ATAD2   320000 perm   127 sec   (2511 perm/sec)   p_kst 1.343750e-04   p_cons 1.665219e-01   p_joint 9.625000e-04

Joint ci ratio: 2.308870e-01	ci left: 7.720158e-04	ci right 9.763070e-04	k: 287	n:330000
Cons ci ratio: 1.526156e-02	ci left: 1.653392e-01	ci right 1.678849e-01	k: 54981	n:330000
KS ci ratio: 5.843184e-01	ci left: 9.688182e-05	ci right 1.789897e-04	k: 44	n:330000
ATAD2   330000 perm   133 sec   (2481 perm/sec)   p_kst 1.333333e-04   p_cons 1.666091e-01   p_joint 8.696970e-04

Joint ci ratio: 2.618293e-01	ci left: 5.726402e-04	ci right 7.478169e-04	k: 223	n:340000
Cons ci ratio: 1.503388e-02	ci left: 1.653870e-01	ci right 1.678951e-01	k: 56657	n:340000
KS ci ratio: 5.779325e-01	ci left: 9.654073e-05	ci right 1.770947e-04	k: 45	n:340000
ATAD2   340000 perm   139 sec   (2455 perm/sec)   p_kst 1.323529e-04   p_cons 1.666382e-01   p_joint 6.558824e-04

Joint ci ratio: 2.654128e-01	ci left: 5.402677e-04	ci right 7.081794e-04	k: 217	n:350000
Cons ci ratio: 1.481655e-02	ci left: 1.654238e-01	ci right 1.678960e-01	k: 58330	n:350000
KS ci ratio: 5.717516e-01	ci left: 9.622379e-05	ci right 1.753035e-04	k: 46	n:350000
ATAD2   350000 perm   145 sec   (2419 perm/sec)   p_kst 1.314286e-04   p_cons 1.666571e-01   p_joint 6.200000e-04

Joint ci ratio: 2.642052e-01	ci left: 5.304467e-04	ci right 6.944318e-04	k: 219	n:360000
Cons ci ratio: 1.460926e-02	ci left: 1.654423e-01	ci right 1.678798e-01	k: 59997	n:360000
KS ci ratio: 5.657648e-01	ci left: 9.592884e-05	ci right 1.736075e-04	k: 47	n:360000
ATAD2   360000 perm   150 sec   (2394 perm/sec)   p_kst 1.305556e-04   p_cons 1.666583e-01   p_joint 6.083333e-04

Joint ci ratio: 2.606745e-01	ci left: 5.312598e-04	ci right 6.929439e-04	k: 225	n:370000
Cons ci ratio: 1.440692e-02	ci left: 1.655273e-01	ci right 1.679320e-01	k: 61689	n:370000
KS ci ratio: 5.543335e-01	ci left: 9.797580e-05	ci right 1.750790e-04	k: 49	n:370000
ATAD2   370000 perm   156 sec   (2369 perm/sec)   p_kst 1.324324e-04   p_cons 1.667270e-01   p_joint 6.081081e-04

Joint ci ratio: 2.601015e-01	ci left: 5.197387e-04	ci right 6.775122e-04	k: 226	n:380000
Cons ci ratio: 1.421062e-02	ci left: 1.656500e-01	ci right 1.680235e-01	k: 63397	n:380000
KS ci ratio: 5.488722e-01	ci left: 9.766196e-05	ci right 1.734668e-04	k: 50	n:380000
ATAD2   380000 perm   162 sec   (2345 perm/sec)   p_kst 1.315789e-04   p_cons 1.668342e-01   p_joint 5.947368e-04

Joint ci ratio: 2.567307e-01	ci left: 5.208003e-04	ci right 6.765189e-04	k: 232	n:390000
Cons ci ratio: 1.402380e-02	ci left: 1.657335e-01	ci right 1.680766e-01	k: 65092	n:390000
KS ci ratio: 5.435693e-01	ci left: 9.736778e-05	ci right 1.719338e-04	k: 51	n:390000
ATAD2   390000 perm   168 sec   (2322 perm/sec)   p_kst 1.307692e-04   p_cons 1.669026e-01   p_joint 5.948718e-04

Joint ci ratio: 2.979673e-01	ci left: 3.681488e-04	ci right 4.992652e-04	k: 172	n:400000
Cons ci ratio: 1.385288e-02	ci left: 1.656384e-01	ci right 1.679514e-01	k: 66717	n:400000
KS ci ratio: 5.384171e-01	ci left: 9.709169e-05	ci right 1.704743e-04	k: 52	n:400000
ATAD2   400000 perm   174 sec   (2300 perm/sec)   p_kst 1.300000e-04   p_cons 1.667925e-01   p_joint 4.300000e-04

Joint ci ratio: 2.921150e-01	ci left: 3.749796e-04	ci right 5.054208e-04	k: 179	n:410000
Cons ci ratio: 1.368602e-02	ci left: 1.655895e-01	ci right 1.678738e-01	k: 68359	n:410000
KS ci ratio: 5.384180e-01	ci left: 9.472357e-05	ci right 1.663164e-04	k: 52	n:410000
ATAD2   410000 perm   180 sec   (2276 perm/sec)   p_kst 1.268293e-04   p_cons 1.667293e-01   p_joint 4.365854e-04

Joint ci ratio: 3.477907e-01	ci left: 2.499140e-04	ci right 3.571780e-04	k: 126	n:420000
Cons ci ratio: 1.352157e-02	ci left: 1.656143e-01	ci right 1.678713e-01	k: 70031	n:420000
KS ci ratio: 5.237965e-01	ci left: 9.865273e-05	ci right 1.704492e-04	k: 55	n:420000
ATAD2   420000 perm   186 sec   (2255 perm/sec)   p_kst 1.309524e-04   p_cons 1.667405e-01   p_joint 3.000000e-04

Joint ci ratio: 3.491698e-01	ci left: 2.419798e-04	ci right 3.463435e-04	k: 125	n:430000
Cons ci ratio: 1.336536e-02	ci left: 1.655871e-01	ci right 1.678174e-01	k: 71681	n:430000
KS ci ratio: 5.146859e-01	ci left: 1.003997e-04	ci right 1.717411e-04	k: 57	n:430000
ATAD2   430000 perm   193 sec   (2233 perm/sec)   p_kst 1.325581e-04   p_cons 1.667000e-01   p_joint 2.906977e-04

Joint ci ratio: 3.477932e-01	ci left: 2.385540e-04	ci right 3.409431e-04	k: 126	n:440000
Cons ci ratio: 1.321467e-02	ci left: 1.655567e-01	ci right 1.677613e-01	k: 73329	n:440000
KS ci ratio: 5.060347e-01	ci left: 1.020777e-04	ci right 1.729641e-04	k: 59	n:440000
ATAD2   440000 perm   199 sec   (2211 perm/sec)   p_kst 1.340909e-04   p_cons 1.666568e-01   p_joint 2.863636e-04

Joint ci ratio: 5.543403e-01	ci left: 8.055765e-05	ci right 1.439544e-04	k: 49	n:450000
Cons ci ratio: 1.271986e-02	ci left: 1.731638e-01	ci right 1.753827e-01	k: 78422	n:450000
KS ci ratio: 4.978056e-01	ci left: 1.036908e-04	ci right 1.741234e-04	k: 61	n:450000
ATAD2   450000 perm   206 sec   (2185 perm/sec)   p_kst 1.355556e-04   p_cons 1.742711e-01   p_joint 1.088889e-04

Joint ci ratio: 5.599696e-01	ci left: 7.693882e-05	ci right 1.383477e-04	k: 48	n:460000
Cons ci ratio: 1.257663e-02	ci left: 1.732719e-01	ci right 1.754670e-01	k: 80209	n:460000
KS ci ratio: 4.861813e-01	ci left: 1.071490e-04	ci right 1.776630e-04	k: 64	n:460000
ATAD2   460000 perm   213 sec   (2162 perm/sec)   p_kst 1.391304e-04   p_cons 1.743674e-01   p_joint 1.043478e-04

Joint ci ratio: 5.599702e-01	ci left: 7.530180e-05	ci right 1.354042e-04	k: 48	n:470000
Cons ci ratio: 1.244503e-02	ci left: 1.732164e-01	ci right 1.753876e-01	k: 81921	n:470000
KS ci ratio: 4.861820e-01	ci left: 1.048692e-04	ci right 1.738830e-04	k: 64	n:470000
ATAD2   470000 perm   220 sec   (2139 perm/sec)   p_kst 1.361702e-04   p_cons 1.743000e-01   p_joint 1.021277e-04

Joint ci ratio: 5.543423e-01	ci left: 7.552274e-05	ci right 1.349574e-04	k: 49	n:480000
Cons ci ratio: 1.231409e-02	ci left: 1.732423e-01	ci right 1.753908e-01	k: 83671	n:480000
KS ci ratio: 4.824850e-01	ci left: 1.045132e-04	ci right 1.725964e-04	k: 65	n:480000
ATAD2   480000 perm   227 sec   (2119 perm/sec)   p_kst 1.354167e-04   p_cons 1.743146e-01   p_joint 1.020833e-04

Joint ci ratio: 5.599714e-01	ci left: 7.222822e-05	ci right 1.298776e-04	k: 48	n:490000
Cons ci ratio: 1.218928e-02	ci left: 1.732183e-01	ci right 1.753447e-01	k: 85397	n:490000
KS ci ratio: 4.753364e-01	ci left: 1.059690e-04	ci right 1.736450e-04	k: 67	n:490000
ATAD2   490000 perm   233 sec   (2100 perm/sec)   p_kst 1.367347e-04   p_cons 1.742796e-01   p_joint 9.795918e-05

Joint ci ratio: 5.599720e-01	ci left: 7.078364e-05	ci right 1.272801e-04	k: 48	n:500000
Cons ci ratio: 1.207120e-02	ci left: 1.731237e-01	ci right 1.752281e-01	k: 87087	n:500000
KS ci ratio: 4.684963e-01	ci left: 1.073738e-04	ci right 1.746446e-04	k: 69	n:500000
ATAD2   500000 perm   240 sec   (2080 perm/sec)   p_kst 1.380000e-04   p_cons 1.741740e-01   p_joint 9.600000e-05

Joint ci ratio: 5.657761e-01	ci left: 6.771416e-05	ci right 1.225472e-04	k: 47	n:510000
Cons ci ratio: 1.194753e-02	ci left: 1.732480e-01	ci right 1.753322e-01	k: 88887	n:510000
KS ci ratio: 4.619434e-01	ci left: 1.087302e-04	ci right 1.755985e-04	k: 71	n:510000
ATAD2   510000 perm   247 sec   (2062 perm/sec)   p_kst 1.392157e-04   p_cons 1.742882e-01   p_joint 9.215686e-05

Joint ci ratio: 5.599731e-01	ci left: 6.806117e-05	ci right 1.223848e-04	k: 48	n:520000
Cons ci ratio: 1.182821e-02	ci left: 1.733522e-01	ci right 1.754168e-01	k: 90679	n:520000
KS ci ratio: 4.587687e-01	ci left: 1.083392e-04	ci right 1.743663e-04	k: 72	n:520000
ATAD2   520000 perm   254 sec   (2044 perm/sec)   p_kst 1.384615e-04   p_cons 1.743827e-01   p_joint 9.230769e-05

Joint ci ratio: 6.048446e-01	ci left: 5.551434e-05	ci right 1.049441e-04	k: 41	n:530000
Cons ci ratio: 1.171838e-02	ci left: 1.733059e-01	ci right 1.753505e-01	k: 92393	n:530000
KS ci ratio: 4.651868e-01	ci left: 1.029607e-04	ci right 1.668665e-04	k: 70	n:530000
ATAD2   530000 perm   262 sec   (2025 perm/sec)   p_kst 1.320755e-04   p_cons 1.743264e-01   p_joint 7.735849e-05

Joint ci ratio: 6.048450e-01	ci left: 5.448629e-05	ci right 1.030007e-04	k: 41	n:540000
Cons ci ratio: 1.161044e-02	ci left: 1.732890e-01	ci right 1.753145e-01	k: 94122	n:540000
KS ci ratio: 4.556591e-01	ci left: 1.059651e-04	ci right 1.699721e-04	k: 73	n:540000
ATAD2   540000 perm   269 sec   (2008 perm/sec)   p_kst 1.351852e-04   p_cons 1.743000e-01   p_joint 7.592593e-05

Joint ci ratio: 5.977705e-01	ci left: 5.503673e-05	ci right 1.032201e-04	k: 42	n:550000
Cons ci ratio: 1.150971e-02	ci left: 1.731658e-01	ci right 1.751722e-01	k: 95792	n:550000
KS ci ratio: 4.526113e-01	ci left: 1.056486e-04	ci right 1.689066e-04	k: 74	n:550000
ATAD2   550000 perm   276 sec   (1990 perm/sec)   p_kst 1.345455e-04   p_cons 1.741673e-01   p_joint 7.636364e-05

Joint ci ratio: 5.843351e-01	ci left: 5.709068e-05	ci right 1.054771e-04	k: 44	n:560000
Cons ci ratio: 1.141334e-02	ci left: 1.730025e-01	ci right 1.749901e-01	k: 97437	n:560000
KS ci ratio: 4.466943e-01	ci left: 1.069289e-04	ci right 1.698638e-04	k: 76	n:560000
ATAD2   560000 perm   284 sec   (1972 perm/sec)   p_kst 1.357143e-04   p_cons 1.739946e-01   p_joint 7.857143e-05

Joint ci ratio: 5.843355e-01	ci left: 5.608908e-05	ci right 1.036266e-04	k: 44	n:570000
Cons ci ratio: 1.131492e-02	ci left: 1.729571e-01	ci right 1.749269e-01	k: 99146	n:570000
KS ci ratio: 4.466949e-01	ci left: 1.050529e-04	ci right 1.668837e-04	k: 76	n:570000
ATAD2   570000 perm   292 sec   (1954 perm/sec)   p_kst 1.333333e-04   p_cons 1.739404e-01   p_joint 7.719298e-05

Joint ci ratio: 5.717671e-01	ci left: 5.806571e-05	ci right 1.057875e-04	k: 46	n:580000
Cons ci ratio: 1.122216e-02	ci left: 1.728324e-01	ci right 1.747846e-01	k: 100808	n:580000
KS ci ratio: 4.382387e-01	ci left: 1.078377e-04	ci right 1.697516e-04	k: 79	n:580000
ATAD2   580000 perm   299 sec   (1937 perm/sec)   p_kst 1.362069e-04   p_cons 1.738069e-01   p_joint 7.931034e-05

Joint ci ratio: 5.657798e-01	ci left: 5.853249e-05	ci right 1.059309e-04	k: 47	n:590000
Cons ci ratio: 1.112174e-02	ci left: 1.729674e-01	ci right 1.749036e-01	k: 102621	n:590000
KS ci ratio: 4.355253e-01	ci left: 1.075184e-04	ci right 1.687547e-04	k: 80	n:590000
ATAD2   590000 perm   307 sec   (1921 perm/sec)   p_kst 1.355932e-04   p_cons 1.739339e-01   p_joint 7.966102e-05

Joint ci ratio: 5.657802e-01	ci left: 5.755694e-05	ci right 1.041654e-04	k: 47	n:600000
Cons ci ratio: 1.102920e-02	ci left: 1.729617e-01	ci right 1.748815e-01	k: 104352	n:600000
KS ci ratio: 4.328616e-01	ci left: 1.072109e-04	ci right 1.677899e-04	k: 81	n:600000
ATAD2   600000 perm   315 sec   (1904 perm/sec)   p_kst 1.350000e-04   p_cons 1.739200e-01   p_joint 7.833333e-05

Joint ci ratio: 5.599770e-01	ci left: 5.801926e-05	ci right 1.043282e-04	k: 48	n:610000
Cons ci ratio: 1.093769e-02	ci left: 1.729888e-01	ci right 1.748929e-01	k: 106103	n:610000
KS ci ratio: 4.328621e-01	ci left: 1.054533e-04	ci right 1.650393e-04	k: 81	n:610000
ATAD2   610000 perm   323 sec   (1887 perm/sec)   p_kst 1.327869e-04   p_cons 1.739393e-01   p_joint 7.868852e-05

Joint ci ratio: 5.599774e-01	ci left: 5.708346e-05	ci right 1.026455e-04	k: 48	n:620000
Cons ci ratio: 1.084921e-02	ci left: 1.729943e-01	ci right 1.748830e-01	k: 107841	n:620000
KS ci ratio: 4.328626e-01	ci left: 1.037524e-04	ci right 1.623774e-04	k: 81	n:620000
ATAD2   620000 perm   331 sec   (1871 perm/sec)   p_kst 1.306452e-04   p_cons 1.739371e-01   p_joint 7.741935e-05

Joint ci ratio: 5.543493e-01	ci left: 5.754096e-05	ci right 1.028251e-04	k: 49	n:630000
Cons ci ratio: 1.076403e-02	ci left: 1.729679e-01	ci right 1.748414e-01	k: 109559	n:630000
KS ci ratio: 4.302472e-01	ci left: 1.035204e-04	ci right 1.615588e-04	k: 82	n:630000
ATAD2   630000 perm   340 sec   (1855 perm/sec)   p_kst 1.301587e-04   p_cons 1.739032e-01   p_joint 7.777778e-05

Joint ci ratio: 4.131749e-01	ci left: 1.116800e-04	ci right 1.711256e-04	k: 89	n:640000
Cons ci ratio: 1.096294e-02	ci left: 1.655958e-01	ci right 1.674228e-01	k: 106565	n:640000
KS ci ratio: 4.276787e-01	ci left: 1.032967e-04	ci right 1.607647e-04	k: 83	n:640000
ATAD2   640000 perm   348 sec   (1840 perm/sec)   p_kst 1.296875e-04   p_cons 1.665078e-01   p_joint 1.390625e-04

Joint ci ratio: 4.131754e-01	ci left: 1.099619e-04	ci right 1.684930e-04	k: 89	n:650000
Cons ci ratio: 1.087810e-02	ci left: 1.656074e-01	ci right 1.674202e-01	k: 108233	n:650000
KS ci ratio: 4.251556e-01	ci left: 1.030808e-04	ci right 1.599940e-04	k: 84	n:650000
ATAD2   650000 perm   356 sec   (1826 perm/sec)   p_kst 1.292308e-04   p_cons 1.665123e-01   p_joint 1.369231e-04

Joint ci ratio: 4.086595e-01	ci left: 1.110128e-04	ci right 1.692819e-04	k: 91	n:660000
Cons ci ratio: 1.079503e-02	ci left: 1.656231e-01	ci right 1.674222e-01	k: 109904	n:660000
KS ci ratio: 4.178452e-01	ci left: 1.055823e-04	ci right 1.625947e-04	k: 87	n:660000
ATAD2   660000 perm   365 sec   (1811 perm/sec)   p_kst 1.318182e-04   p_cons 1.665212e-01   p_joint 1.378788e-04

Joint ci ratio: 4.042885e-01	ci left: 1.120357e-04	ci right 1.700440e-04	k: 93	n:670000
Cons ci ratio: 1.071511e-02	ci left: 1.656057e-01	ci right 1.673912e-01	k: 111553	n:670000
KS ci ratio: 4.131762e-01	ci left: 1.066794e-04	ci right 1.634634e-04	k: 89	n:670000
ATAD2   670000 perm   373 sec   (1796 perm/sec)   p_kst 1.328358e-04   p_cons 1.664970e-01   p_joint 1.388060e-04

Joint ci ratio: 4.042889e-01	ci left: 1.103881e-04	ci right 1.675434e-04	k: 93	n:680000
Cons ci ratio: 1.063484e-02	ci left: 1.656431e-01	ci right 1.674156e-01	k: 113239	n:680000
KS ci ratio: 4.131766e-01	ci left: 1.051106e-04	ci right 1.610596e-04	k: 89	n:680000
ATAD2   680000 perm   382 sec   (1782 perm/sec)   p_kst 1.308824e-04   p_cons 1.665279e-01   p_joint 1.367647e-04

Joint ci ratio: 4.042893e-01	ci left: 1.087883e-04	ci right 1.651153e-04	k: 93	n:690000
Cons ci ratio: 1.055729e-02	ci left: 1.656550e-01	ci right 1.674145e-01	k: 114908	n:690000
KS ci ratio: 4.131770e-01	ci left: 1.035872e-04	ci right 1.587254e-04	k: 89	n:690000
ATAD2   690000 perm   390 sec   (1769 perm/sec)   p_kst 1.289855e-04   p_cons 1.665333e-01   p_joint 1.347826e-04

Joint ci ratio: 4.000556e-01	ci left: 1.098023e-04	ci right 1.659012e-04	k: 95	n:700000
Cons ci ratio: 1.047915e-02	ci left: 1.657263e-01	ci right 1.674736e-01	k: 116619	n:700000
KS ci ratio: 4.064578e-01	ci left: 1.059513e-04	ci right 1.611831e-04	k: 92	n:700000
ATAD2   700000 perm   399 sec   (1755 perm/sec)   p_kst 1.314286e-04   p_cons 1.665986e-01   p_joint 1.357143e-04

Joint ci ratio: 4.000560e-01	ci left: 1.082558e-04	ci right 1.635646e-04	k: 95	n:710000
Cons ci ratio: 1.040504e-02	ci left: 1.657339e-01	ci right 1.674688e-01	k: 118286	n:710000
KS ci ratio: 4.042901e-01	ci left: 1.057238e-04	ci right 1.604642e-04	k: 93	n:710000
ATAD2   710000 perm   408 sec   (1742 perm/sec)   p_kst 1.309859e-04   p_cons 1.666000e-01   p_joint 1.338028e-04

Joint ci ratio: 4.000564e-01	ci left: 1.067522e-04	ci right 1.612929e-04	k: 95	n:720000
Cons ci ratio: 1.033284e-02	ci left: 1.657316e-01	ci right 1.674544e-01	k: 119946	n:720000
KS ci ratio: 4.000564e-01	ci left: 1.067522e-04	ci right 1.612929e-04	k: 95	n:720000
ATAD2   720000 perm   416 sec   (1729 perm/sec)   p_kst 1.319444e-04   p_cons 1.665917e-01   p_joint 1.319444e-04

Joint ci ratio: 4.000567e-01	ci left: 1.052898e-04	ci right 1.590834e-04	k: 95	n:730000
Cons ci ratio: 1.026081e-02	ci left: 1.657650e-01	ci right 1.674760e-01	k: 121632	n:730000
KS ci ratio: 4.000567e-01	ci left: 1.052898e-04	ci right 1.590834e-04	k: 95	n:730000
ATAD2   730000 perm   426 sec   (1715 perm/sec)   p_kst 1.301370e-04   p_cons 1.666192e-01   p_joint 1.301370e-04

Joint ci ratio: 3.979893e-01	ci left: 1.050827e-04	ci right 1.584199e-04	k: 96	n:740000
Cons ci ratio: 1.018749e-02	ci left: 1.658730e-01	ci right 1.675728e-01	k: 123374	n:740000
KS ci ratio: 3.277750e-01	ci left: 1.616313e-04	ci right 2.261719e-04	k: 142	n:740000
ATAD2   740000 perm   435 sec   (1702 perm/sec)   p_kst 1.918919e-04   p_cons 1.667216e-01   p_joint 1.297297e-04

Joint ci ratio: 3.939486e-01	ci left: 1.060827e-04	ci right 1.592385e-04	k: 98	n:750000
Cons ci ratio: 1.012188e-02	ci left: 1.658092e-01	ci right 1.674974e-01	k: 124989	n:750000
KS ci ratio: 3.255066e-01	ci left: 1.619242e-04	ci right 2.260408e-04	k: 144	n:750000
ATAD2   750000 perm   444 sec   (1689 perm/sec)   p_kst 1.920000e-04   p_cons 1.666520e-01   p_joint 1.306667e-04

Joint ci ratio: 3.843611e-01	ci left: 1.106223e-04	ci right 1.643627e-04	k: 103	n:760000
Cons ci ratio: 1.005643e-02	ci left: 1.657773e-01	ci right 1.674542e-01	k: 126627	n:760000
KS ci ratio: 3.200349e-01	ci left: 1.658397e-04	ci right 2.301766e-04	k: 149	n:760000
ATAD2   760000 perm   453 sec   (1676 perm/sec)   p_kst 1.960526e-04   p_cons 1.666145e-01   p_joint 1.355263e-04

Joint ci ratio: 3.807176e-01	ci left: 1.115333e-04	ci right 1.650741e-04	k: 105	n:770000
Cons ci ratio: 9.990872e-03	ci left: 1.657839e-01	ci right 1.674498e-01	k: 128294	n:770000
KS ci ratio: 3.158508e-01	ci left: 1.684663e-04	ci right 2.327952e-04	k: 153	n:770000
ATAD2   770000 perm   463 sec   (1664 perm/sec)   p_kst 1.987013e-04   p_cons 1.666156e-01   p_joint 1.363636e-04

Joint ci ratio: 3.807179e-01	ci left: 1.101033e-04	ci right 1.629578e-04	k: 105	n:780000
Cons ci ratio: 9.927362e-03	ci left: 1.657686e-01	ci right 1.674237e-01	k: 129944	n:780000
KS ci ratio: 3.138196e-01	ci left: 1.686680e-04	ci right 2.325767e-04	k: 155	n:780000
ATAD2   780000 perm   472 sec   (1652 perm/sec)   p_kst 1.987179e-04   p_cons 1.665949e-01   p_joint 1.346154e-04

Joint ci ratio: 3.771762e-01	ci left: 1.110001e-04	ci right 1.636667e-04	k: 107	n:790000
Cons ci ratio: 9.865768e-03	ci left: 1.657334e-01	ci right 1.673779e-01	k: 131578	n:790000
KS ci ratio: 3.108447e-01	ci left: 1.700328e-04	ci right 2.337268e-04	k: 158	n:790000
ATAD2   790000 perm   482 sec   (1641 perm/sec)   p_kst 2.000000e-04   p_cons 1.665544e-01   p_joint 1.354430e-04

Joint ci ratio: 3.789351e-01	ci left: 1.084814e-04	ci right 1.602527e-04	k: 106	n:800000
Cons ci ratio: 9.802393e-03	ci left: 1.657816e-01	ci right 1.674158e-01	k: 133278	n:800000
KS ci ratio: 3.098720e-01	ci left: 1.690601e-04	ci right 2.321523e-04	k: 159	n:800000
ATAD2   800000 perm   491 sec   (1629 perm/sec)   p_kst 1.987500e-04   p_cons 1.665975e-01   p_joint 1.325000e-04

Joint ci ratio: 3.789354e-01	ci left: 1.071421e-04	ci right 1.582743e-04	k: 106	n:810000
Cons ci ratio: 9.742996e-03	ci left: 1.657497e-01	ci right 1.673737e-01	k: 134914	n:810000
KS ci ratio: 3.070070e-01	ci left: 1.703900e-04	ci right 2.332757e-04	k: 162	n:810000
ATAD2   810000 perm   501 sec   (1618 perm/sec)   p_kst 2.000000e-04   p_cons 1.665605e-01   p_joint 1.308642e-04

Joint ci ratio: 3.881135e-01	ci left: 1.003257e-04	ci right 1.496616e-04	k: 101	n:820000
Cons ci ratio: 9.683304e-03	ci left: 1.657576e-01	ci right 1.673716e-01	k: 136582	n:820000
KS ci ratio: 3.051407e-01	ci left: 1.705638e-04	ci right 2.330566e-04	k: 164	n:820000
ATAD2   820000 perm   510 sec   (1607 perm/sec)   p_kst 2.000000e-04   p_cons 1.665634e-01   p_joint 1.231707e-04

Joint ci ratio: 3.843633e-01	ci left: 1.012926e-04	ci right 1.505010e-04	k: 103	n:830000
Cons ci ratio: 9.625197e-03	ci left: 1.657508e-01	ci right 1.673551e-01	k: 138238	n:830000
KS ci ratio: 3.033080e-01	ci left: 1.707346e-04	ci right 2.328417e-04	k: 166	n:830000
ATAD2   830000 perm   520 sec   (1595 perm/sec)   p_kst 2.000000e-04   p_cons 1.665518e-01   p_joint 1.240964e-04

Joint ci ratio: 3.807198e-01	ci left: 1.022387e-04	ci right 1.513181e-04	k: 105	n:840000
Cons ci ratio: 9.569354e-03	ci left: 1.657087e-01	ci right 1.673032e-01	k: 139864	n:840000
KS ci ratio: 3.006197e-01	ci left: 1.720029e-04	ci right 2.339109e-04	k: 169	n:840000
ATAD2   840000 perm   530 sec   (1584 perm/sec)   p_kst 2.011905e-04   p_cons 1.665048e-01   p_joint 1.250000e-04

Joint ci ratio: 3.754436e-01	ci left: 1.042299e-04	ci right 1.534012e-04	k: 108	n:850000
Cons ci ratio: 9.513424e-03	ci left: 1.656980e-01	ci right 1.672831e-01	k: 141516	n:850000
KS ci ratio: 2.988668e-01	ci left: 1.721554e-04	ci right 2.336884e-04	k: 171	n:850000
ATAD2   850000 perm   540 sec   (1573 perm/sec)   p_kst 2.011765e-04   p_cons 1.664894e-01   p_joint 1.270588e-04

Joint ci ratio: 3.754439e-01	ci left: 1.030180e-04	ci right 1.516175e-04	k: 108	n:860000
Cons ci ratio: 9.458186e-03	ci left: 1.656958e-01	ci right 1.672716e-01	k: 143175	n:860000
KS ci ratio: 2.971442e-01	ci left: 1.723053e-04	ci right 2.334700e-04	k: 173	n:860000
ATAD2   860000 perm   551 sec   (1562 perm/sec)   p_kst 2.011628e-04   p_cons 1.664826e-01   p_joint 1.255814e-04

Joint ci ratio: 3.754442e-01	ci left: 1.018338e-04	ci right 1.498747e-04	k: 108	n:870000
Cons ci ratio: 9.401173e-03	ci left: 1.657740e-01	ci right 1.673409e-01	k: 144904	n:870000
KS ci ratio: 2.962942e-01	ci left: 1.713887e-04	ci right 2.320212e-04	k: 174	n:870000
ATAD2   870000 perm   561 sec   (1551 perm/sec)   p_kst 2.000000e-04   p_cons 1.665563e-01   p_joint 1.241379e-04

Joint ci ratio: 3.754444e-01	ci left: 1.006766e-04	ci right 1.481716e-04	k: 108	n:880000
Cons ci ratio: 9.348048e-03	ci left: 1.657653e-01	ci right 1.673233e-01	k: 146558	n:880000
KS ci ratio: 2.962945e-01	ci left: 1.694410e-04	ci right 2.293846e-04	k: 174	n:880000
ATAD2   880000 perm   571 sec   (1540 perm/sec)   p_kst 1.977273e-04   p_cons 1.665432e-01   p_joint 1.227273e-04

Joint ci ratio: 2.285812e-01	ci left: 2.925982e-04	ci right 3.691424e-04	k: 293	n:890000
Cons ci ratio: 9.296114e-03	ci left: 1.657479e-01	ci right 1.672970e-01	k: 148204	n:890000
KS ci ratio: 2.946158e-01	ci left: 1.696179e-04	ci right 2.292205e-04	k: 176	n:890000
ATAD2   890000 perm   582 sec   (1530 perm/sec)   p_kst 1.977528e-04   p_cons 1.665213e-01   p_joint 3.292135e-04

Joint ci ratio: 2.278078e-01	ci left: 2.914423e-04	ci right 3.673899e-04	k: 295	n:900000
Cons ci ratio: 9.242372e-03	ci left: 1.658107e-01	ci right 1.673514e-01	k: 149922	n:900000
KS ci ratio: 2.946161e-01	ci left: 1.677332e-04	ci right 2.266737e-04	k: 176	n:900000
ATAD2   900000 perm   592 sec   (1519 perm/sec)   p_kst 1.955556e-04   p_cons 1.665800e-01   p_joint 3.277778e-04

Joint ci ratio: 2.266621e-01	ci left: 2.913487e-04	ci right 3.668367e-04	k: 298	n:910000
Cons ci ratio: 9.190715e-03	ci left: 1.658371e-01	ci right 1.673694e-01	k: 151608	n:910000
KS ci ratio: 2.937875e-01	ci left: 1.669078e-04	ci right 2.253625e-04	k: 177	n:910000
ATAD2   910000 perm   603 sec   (1509 perm/sec)   p_kst 1.945055e-04   p_cons 1.666022e-01   p_joint 3.274725e-04

Joint ci ratio: 2.262843e-01	ci left: 2.892071e-04	ci right 3.639979e-04	k: 299	n:920000
Cons ci ratio: 9.141132e-03	ci left: 1.658261e-01	ci right 1.673499e-01	k: 153260	n:920000
KS ci ratio: 2.929659e-01	ci left: 1.661005e-04	ci right 2.240797e-04	k: 178	n:920000
ATAD2   920000 perm   614 sec   (1499 perm/sec)   p_kst 1.934783e-04   p_cons 1.665870e-01   p_joint 3.250000e-04

Joint ci ratio: 2.244216e-01	ci left: 2.911703e-04	ci right 3.657632e-04	k: 304	n:930000
Cons ci ratio: 9.091109e-03	ci left: 1.658529e-01	ci right 1.673686e-01	k: 154947	n:930000
KS ci ratio: 2.897461e-01	ci left: 1.683013e-04	ci right 2.262847e-04	k: 182	n:930000
ATAD2   930000 perm   624 sec   (1490 perm/sec)   p_kst 1.956989e-04   p_cons 1.666097e-01   p_joint 3.268817e-04

Joint ci ratio: 2.293649e-01	ci left: 2.750286e-04	ci right 3.472581e-04	k: 291	n:940000
Cons ci ratio: 9.041242e-03	ci left: 1.658993e-01	ci right 1.674070e-01	k: 156653	n:940000
KS ci ratio: 2.866301e-01	ci left: 1.704587e-04	ci right 2.284394e-04	k: 186	n:940000
ATAD2   940000 perm   635 sec   (1480 perm/sec)   p_kst 1.978723e-04   p_cons 1.666521e-01   p_joint 3.095745e-04

Joint ci ratio: 2.278098e-01	ci left: 2.761030e-04	ci right 3.480539e-04	k: 295	n:950000
Cons ci ratio: 8.994060e-03	ci left: 1.658869e-01	ci right 1.673867e-01	k: 158304	n:950000
KS ci ratio: 2.836126e-01	ci left: 1.725739e-04	ci right 2.305455e-04	k: 190	n:950000
ATAD2   950000 perm   646 sec   (1470 perm/sec)   p_kst 2.000000e-04   p_cons 1.666358e-01   p_joint 3.105263e-04

Joint ci ratio: 2.274262e-01	ci left: 2.742091e-04	ci right 3.455294e-04	k: 296	n:960000
Cons ci ratio: 8.948146e-03	ci left: 1.658582e-01	ci right 1.673500e-01	k: 159939	n:960000
KS ci ratio: 2.828732e-01	ci left: 1.717439e-04	ci right 2.292595e-04	k: 191	n:960000
ATAD2   960000 perm   657 sec   (1461 perm/sec)   p_kst 1.989583e-04   p_cons 1.666031e-01   p_joint 3.083333e-04

Joint ci ratio: 2.262862e-01	ci left: 2.742993e-04	ci right 3.452354e-04	k: 299	n:970000
Cons ci ratio: 8.902002e-03	ci left: 1.658590e-01	ci right 1.673430e-01	k: 161602	n:970000
KS ci ratio: 2.799716e-01	ci left: 1.738061e-04	ci right 2.313099e-04	k: 195	n:970000
ATAD2   970000 perm   668 sec   (1452 perm/sec)   p_kst 2.010309e-04   p_cons 1.666000e-01   p_joint 3.082474e-04

Joint ci ratio: 2.255358e-01	ci left: 2.734256e-04	ci right 3.438688e-04	k: 301	n:980000
Cons ci ratio: 8.858258e-03	ci left: 1.658067e-01	ci right 1.672830e-01	k: 163213	n:980000
KS ci ratio: 2.792602e-01	ci left: 1.729814e-04	ci right 2.300414e-04	k: 196	n:980000
ATAD2   980000 perm   679 sec   (1443 perm/sec)   p_kst 2.000000e-04   p_cons 1.665439e-01   p_joint 3.071429e-04

Joint ci ratio: 1.688003e-01	ci left: 4.984891e-04	ci right 5.913423e-04	k: 538	n:990000
Cons ci ratio: 8.812683e-03	ci left: 1.658332e-01	ci right 1.673021e-01	k: 164901	n:990000
KS ci ratio: 2.764673e-01	ci left: 1.749931e-04	ci right 2.320389e-04	k: 200	n:990000
ATAD2   990000 perm   690 sec   (1434 perm/sec)   p_kst 2.020202e-04   p_cons 1.665667e-01   p_joint 5.434343e-04

Joint ci ratio: 1.678685e-01	ci left: 4.992515e-04	ci right 5.916814e-04	k: 544	n:1000000
Cons ci ratio: 8.768846e-03	ci left: 1.658262e-01	ci right 1.672877e-01	k: 166556	n:1000000
KS ci ratio: 2.744268e-01	ci left: 1.760360e-04	ci right 2.329252e-04	k: 203	n:1000000
ATAD2   1000000 perm   702 sec   (1425 perm/sec)   p_kst 2.030000e-04   p_cons 1.665560e-01   p_joint 5.440000e-04

Joint ci ratio: 1.781390e-01	ci left: 4.365239e-04	ci right 5.228184e-04	k: 483	n:1010000
Cons ci ratio: 8.727182e-03	ci left: 1.657710e-01	ci right 1.672250e-01	k: 168162	n:1010000
KS ci ratio: 2.717750e-01	ci left: 1.779823e-04	ci right 2.348499e-04	k: 207	n:1010000
ATAD2   1010000 perm   713 sec   (1416 perm/sec)   p_kst 2.049505e-04   p_cons 1.664970e-01   p_joint 4.782178e-04

Joint ci ratio: 1.777724e-01	ci left: 4.341177e-04	ci right 5.197409e-04	k: 485	n:1020000
Cons ci ratio: 8.685247e-03	ci left: 1.657442e-01	ci right 1.671910e-01	k: 169796	n:1020000
KS ci ratio: 2.711242e-01	ci left: 1.771510e-04	ci right 2.335944e-04	k: 208	n:1020000
ATAD2   1020000 perm   725 sec   (1407 perm/sec)   p_kst 2.039216e-04   p_cons 1.664667e-01   p_joint 4.754902e-04

Joint ci ratio: 1.765056e-01	ci left: 4.363978e-04	ci right 5.217919e-04	k: 492	n:1030000
Cons ci ratio: 8.642308e-03	ci left: 1.657694e-01	ci right 1.672092e-01	k: 171483	n:1030000
KS ci ratio: 2.691989e-01	ci left: 1.781465e-04	ci right 2.344359e-04	k: 211	n:1030000
ATAD2   1030000 perm   736 sec   (1399 perm/sec)   p_kst 2.048544e-04   p_cons 1.664883e-01   p_joint 4.776699e-04

Joint ci ratio: 1.761489e-01	ci left: 4.340398e-04	ci right 5.187826e-04	k: 494	n:1040000
Cons ci ratio: 8.601161e-03	ci left: 1.657566e-01	ci right 1.671894e-01	k: 173131	n:1040000
KS ci ratio: 2.685663e-01	ci left: 1.773303e-04	ci right 2.332079e-04	k: 212	n:1040000
ATAD2   1040000 perm   748 sec   (1390 perm/sec)   p_kst 2.038462e-04   p_cons 1.664721e-01   p_joint 4.750000e-04

Joint ci ratio: 2.045865e-01	ci left: 3.137764e-04	ci right 3.861694e-04	k: 366	n:1050000
Cons ci ratio: 8.560773e-03	ci left: 1.657385e-01	ci right 1.671643e-01	k: 174773	n:1050000
KS ci ratio: 2.679382e-01	ci left: 1.765297e-04	ci right 2.320032e-04	k: 213	n:1050000
ATAD2   1050000 perm   760 sec   (1382 perm/sec)   p_kst 2.028571e-04   p_cons 1.664505e-01   p_joint 3.485714e-04

Joint ci ratio: 2.040314e-01	ci left: 3.126065e-04	ci right 3.845095e-04	k: 368	n:1060000
Cons ci ratio: 8.520340e-03	ci left: 1.657404e-01	ci right 1.671595e-01	k: 176436	n:1060000
KS ci ratio: 2.666949e-01	ci left: 1.766247e-04	ci right 2.318274e-04	k: 215	n:1060000
ATAD2   1060000 perm   772 sec   (1373 perm/sec)   p_kst 2.028302e-04   p_cons 1.664491e-01   p_joint 3.471698e-04

Joint ci ratio: 2.029344e-01	ci left: 3.132328e-04	ci right 3.848445e-04	k: 372	n:1070000
Cons ci ratio: 8.482332e-03	ci left: 1.656817e-01	ci right 1.670940e-01	k: 178034	n:1070000
KS ci ratio: 2.654687e-01	ci left: 1.767185e-04	ci right 2.316543e-04	k: 217	n:1070000
ATAD2   1070000 perm   784 sec   (1365 perm/sec)   p_kst 2.028037e-04   p_cons 1.663869e-01   p_joint 3.476636e-04

Joint ci ratio: 2.043092e-01	ci left: 3.059388e-04	ci right 3.764159e-04	k: 367	n:1080000
Cons ci ratio: 8.442488e-03	ci left: 1.657008e-01	ci right 1.671066e-01	k: 179715	n:1080000
KS ci ratio: 2.648621e-01	ci left: 1.759466e-04	ci right 2.304967e-04	k: 218	n:1080000
ATAD2   1080000 perm   796 sec   (1356 perm/sec)   p_kst 2.018519e-04   p_cons 1.664028e-01   p_joint 3.398148e-04

Joint ci ratio: 2.037564e-01	ci left: 3.048731e-04	ci right 3.748911e-04	k: 369	n:1090000
Cons ci ratio: 8.402339e-03	ci left: 1.657480e-01	ci right 1.671474e-01	k: 181427	n:1090000
KS ci ratio: 2.636609e-01	ci left: 1.760457e-04	ci right 2.303382e-04	k: 220	n:1090000
ATAD2   1090000 perm   809 sec   (1347 perm/sec)   p_kst 2.018349e-04   p_cons 1.664468e-01   p_joint 3.385321e-04

Joint ci ratio: 2.032081e-01	ci left: 3.038271e-04	ci right 3.733937e-04	k: 371	n:1100000
Cons ci ratio: 8.362703e-03	ci left: 1.657961e-01	ci right 1.671893e-01	k: 183141	n:1100000
KS ci ratio: 2.630665e-01	ci left: 1.752944e-04	ci right 2.292132e-04	k: 221	n:1100000
ATAD2   1100000 perm   823 sec   (1337 perm/sec)   p_kst 2.009091e-04   p_cons 1.664918e-01   p_joint 3.372727e-04

Joint ci ratio: 2.026641e-01	ci left: 3.028001e-04	ci right 3.719230e-04	k: 373	n:1110000
Cons ci ratio: 8.325486e-03	ci left: 1.657813e-01	ci right 1.671682e-01	k: 184786	n:1110000
KS ci ratio: 2.630667e-01	ci left: 1.737151e-04	ci right 2.271483e-04	k: 221	n:1110000
ATAD2   1110000 perm   835 sec   (1329 perm/sec)   p_kst 1.990991e-04   p_cons 1.664739e-01   p_joint 3.360360e-04

Joint ci ratio: 2.021245e-01	ci left: 3.017917e-04	ci right 3.704784e-04	k: 375	n:1120000
Cons ci ratio: 8.288522e-03	ci left: 1.657748e-01	ci right 1.671555e-01	k: 186440	n:1120000
KS ci ratio: 2.624764e-01	ci left: 1.729981e-04	ci right 2.260717e-04	k: 222	n:1120000
ATAD2   1120000 perm   848 sec   (1321 perm/sec)   p_kst 1.982143e-04   p_cons 1.664643e-01   p_joint 3.348214e-04

Joint ci ratio: 2.013230e-01	ci left: 3.016418e-04	ci right 3.699886e-04	k: 378	n:1130000
Cons ci ratio: 8.253520e-03	ci left: 1.657190e-01	ci right 1.670933e-01	k: 188038	n:1130000
KS ci ratio: 2.607283e-01	ci left: 1.739480e-04	ci right 2.268996e-04	k: 225	n:1130000
ATAD2   1130000 perm   860 sec   (1313 perm/sec)   p_kst 1.991150e-04   p_cons 1.664053e-01   p_joint 3.345133e-04

Joint ci ratio: 2.002689e-01	ci left: 3.023282e-04	ci right 3.704281e-04	k: 382	n:1140000
Cons ci ratio: 8.217269e-03	ci left: 1.657211e-01	ci right 1.670894e-01	k: 189701	n:1140000
KS ci ratio: 2.584510e-01	ci left: 1.757026e-04	ci right 2.286458e-04	k: 229	n:1140000
ATAD2   1140000 perm   873 sec   (1306 perm/sec)   p_kst 2.008772e-04   p_cons 1.664044e-01   p_joint 3.350877e-04

Joint ci ratio: 1.984632e-01	ci left: 3.054824e-04	ci right 3.735973e-04	k: 389	n:1150000
Cons ci ratio: 8.180362e-03	ci left: 1.657614e-01	ci right 1.671238e-01	k: 191408	n:1150000
KS ci ratio: 2.567816e-01	ci left: 1.766151e-04	ci right 2.294343e-04	k: 232	n:1150000
ATAD2   1150000 perm   886 sec   (1298 perm/sec)   p_kst 2.017391e-04   p_cons 1.664417e-01   p_joint 3.382609e-04

Joint ci ratio: 1.979564e-01	ci left: 3.044875e-04	ci right 3.721862e-04	k: 391	n:1160000
Cons ci ratio: 8.146099e-03	ci left: 1.657278e-01	ci right 1.670842e-01	k: 193030	n:1160000
KS ci ratio: 2.562325e-01	ci left: 1.758992e-04	ci right 2.283739e-04	k: 233	n:1160000
ATAD2   1160000 perm   899 sec   (1290 perm/sec)   p_kst 2.008621e-04   p_cons 1.664052e-01   p_joint 3.370690e-04

Joint ci ratio: 1.972032e-01	ci left: 3.043223e-04	ci right 3.716959e-04	k: 394	n:1170000
Cons ci ratio: 8.112314e-03	ci left: 1.656931e-01	ci right 1.670436e-01	k: 194650	n:1170000
KS ci ratio: 2.551444e-01	ci left: 1.759956e-04	ci right 2.282407e-04	k: 235	n:1170000
ATAD2   1170000 perm   912 sec   (1283 perm/sec)   p_kst 2.008547e-04   p_cons 1.663675e-01   p_joint 3.367521e-04

Joint ci ratio: 1.964586e-01	ci left: 3.041604e-04	ci right 3.712135e-04	k: 397	n:1180000
Cons ci ratio: 8.076477e-03	ci left: 1.657436e-01	ci right 1.670885e-01	k: 196370	n:1180000
KS ci ratio: 2.546057e-01	ci left: 1.752974e-04	ci right 2.272079e-04	k: 236	n:1180000
ATAD2   1180000 perm   925 sec   (1275 perm/sec)   p_kst 2.000000e-04   p_cons 1.664153e-01   p_joint 3.364407e-04

Joint ci ratio: 1.957224e-01	ci left: 3.040016e-04	ci right 3.707387e-04	k: 400	n:1190000
Cons ci ratio: 8.043229e-03	ci left: 1.657203e-01	ci right 1.670595e-01	k: 198003	n:1190000
KS ci ratio: 2.540703e-01	ci left: 1.746111e-04	ci right 2.261924e-04	k: 237	n:1190000
ATAD2   1190000 perm   939 sec   (1267 perm/sec)   p_kst 1.991597e-04   p_cons 1.663891e-01   p_joint 3.361345e-04

Joint ci ratio: 1.952362e-01	ci left: 3.030534e-04	ci right 3.693973e-04	k: 402	n:1200000
Cons ci ratio: 8.009956e-03	ci left: 1.657124e-01	ci right 1.670459e-01	k: 199654	n:1200000
KS ci ratio: 2.519616e-01	ci left: 1.762780e-04	ci right 2.278517e-04	k: 241	n:1200000
ATAD2   1200000 perm   952 sec   (1260 perm/sec)   p_kst 2.008333e-04   p_cons 1.663783e-01   p_joint 3.350000e-04

Joint ci ratio: 1.949946e-01	ci left: 3.013349e-04	ci right 3.672113e-04	k: 403	n:1210000
Cons ci ratio: 7.978139e-03	ci left: 1.656683e-01	ci right 1.669961e-01	k: 201261	n:1210000
KS ci ratio: 2.519618e-01	ci left: 1.748212e-04	ci right 2.259686e-04	k: 241	n:1210000
ATAD2   1210000 perm   965 sec   (1254 perm/sec)   p_kst 1.991736e-04   p_cons 1.663314e-01   p_joint 3.330579e-04

Joint ci ratio: 1.940364e-01	ci left: 3.019839e-04	ci right 3.676395e-04	k: 407	n:1220000
Cons ci ratio: 7.946251e-03	ci left: 1.656405e-01	ci right 1.669627e-01	k: 202887	n:1220000
KS ci ratio: 2.504144e-01	ci left: 1.756924e-04	ci right 2.267299e-04	k: 244	n:1220000
ATAD2   1220000 perm   979 sec   (1247 perm/sec)   p_kst 2.000000e-04   p_cons 1.663008e-01   p_joint 3.336066e-04

Joint ci ratio: 1.933270e-01	ci left: 3.018495e-04	ci right 3.672077e-04	k: 410	n:1230000
Cons ci ratio: 7.914254e-03	ci left: 1.656302e-01	ci right 1.669470e-01	k: 204534	n:1230000
KS ci ratio: 2.488951e-01	ci left: 1.765505e-04	ci right 2.274779e-04	k: 247	n:1230000
ATAD2   1230000 perm   992 sec   (1240 perm/sec)   p_kst 2.008130e-04   p_cons 1.662878e-01   p_joint 3.333333e-04

Joint ci ratio: 1.928584e-01	ci left: 3.009502e-04	ci right 3.659371e-04	k: 412	n:1240000
Cons ci ratio: 7.883238e-03	ci left: 1.655991e-01	ci right 1.669105e-01	k: 206155	n:1240000
KS ci ratio: 2.474031e-01	ci left: 1.773956e-04	ci right 2.282129e-04	k: 250	n:1240000
ATAD2   1240000 perm   1005 sec   (1233 perm/sec)   p_kst 2.016129e-04   p_cons 1.662540e-01   p_joint 3.322581e-04

Joint ci ratio: 1.919311e-01	ci left: 3.015885e-04	ci right 3.663636e-04	k: 416	n:1250000
Cons ci ratio: 7.852583e-03	ci left: 1.655686e-01	ci right 1.668746e-01	k: 207776	n:1250000
KS ci ratio: 2.474033e-01	ci left: 1.759764e-04	ci right 2.263872e-04	k: 250	n:1250000
ATAD2   1250000 perm   1019 sec   (1226 perm/sec)   p_kst 2.000000e-04   p_cons 1.662208e-01   p_joint 3.328000e-04

Joint ci ratio: 1.910171e-01	ci left: 3.022173e-04	ci right 3.667825e-04	k: 420	n:1260000
Cons ci ratio: 7.821544e-03	ci left: 1.655646e-01	ci right 1.668655e-01	k: 209430	n:1260000
KS ci ratio: 2.464234e-01	ci left: 1.760689e-04	ci right 2.262758e-04	k: 252	n:1260000
ATAD2   1260000 perm   1033 sec   (1220 perm/sec)   p_kst 2.000000e-04   p_cons 1.662143e-01   p_joint 3.333333e-04

Joint ci ratio: 1.907908e-01	ci left: 3.005874e-04	ci right 3.647195e-04	k: 421	n:1270000
Cons ci ratio: 7.790782e-03	ci left: 1.655639e-01	ci right 1.668596e-01	k: 211088	n:1270000
KS ci ratio: 2.464236e-01	ci left: 1.746825e-04	ci right 2.244941e-04	k: 252	n:1270000
ATAD2   1270000 perm   1047 sec   (1213 perm/sec)   p_kst 1.984252e-04   p_cons 1.662110e-01   p_joint 3.314961e-04

Joint ci ratio: 1.896704e-01	ci left: 3.019593e-04	ci right 3.659622e-04	k: 426	n:1280000
Cons ci ratio: 7.760795e-03	ci left: 1.655484e-01	ci right 1.668390e-01	k: 212727	n:1280000
KS ci ratio: 2.454554e-01	ci left: 1.747840e-04	ci right 2.243988e-04	k: 254	n:1280000
ATAD2   1280000 perm   1061 sec   (1206 perm/sec)   p_kst 1.984375e-04   p_cons 1.661930e-01   p_joint 3.328125e-04

Joint ci ratio: 1.885694e-01	ci left: 3.033110e-04	ci right 3.671845e-04	k: 431	n:1290000
Cons ci ratio: 7.731649e-03	ci left: 1.655154e-01	ci right 1.668008e-01	k: 214343	n:1290000
KS ci ratio: 2.440240e-01	ci left: 1.756121e-04	ci right 2.251272e-04	k: 257	n:1290000
ATAD2   1290000 perm   1075 sec   (1200 perm/sec)   p_kst 1.992248e-04   p_cons 1.661574e-01   p_joint 3.341085e-04

Joint ci ratio: 1.877024e-01	ci left: 3.039099e-04	ci right 3.675816e-04	k: 435	n:1300000
Cons ci ratio: 7.702637e-03	ci left: 1.654898e-01	ci right 1.667702e-01	k: 215968	n:1300000
KS ci ratio: 2.426175e-01	ci left: 1.764282e-04	ci right 2.258436e-04	k: 260	n:1300000
ATAD2   1300000 perm   1089 sec   (1193 perm/sec)   p_kst 2.000000e-04   p_cons 1.661292e-01   p_joint 3.346154e-04

Joint ci ratio: 1.870600e-01	ci left: 3.037726e-04	ci right 3.671731e-04	k: 438	n:1310000
Cons ci ratio: 7.673145e-03	ci left: 1.654935e-01	ci right 1.667690e-01	k: 217631	n:1310000
KS ci ratio: 2.426176e-01	ci left: 1.750814e-04	ci right 2.241196e-04	k: 260	n:1310000
ATAD2   1310000 perm   1104 sec   (1187 perm/sec)   p_kst 1.984733e-04   p_cons 1.661305e-01   p_joint 3.343511e-04

Joint ci ratio: 1.857944e-01	ci left: 3.058047e-04	ci right 3.691487e-04	k: 444	n:1320000
Cons ci ratio: 7.644450e-03	ci left: 1.654806e-01	ci right 1.667512e-01	k: 219272	n:1320000
KS ci ratio: 2.407794e-01	ci left: 1.766019e-04	ci right 2.256352e-04	k: 264	n:1320000
ATAD2   1320000 perm   1118 sec   (1181 perm/sec)   p_kst 2.000000e-04   p_cons 1.661152e-01   p_joint 3.363636e-04

Joint ci ratio: 1.847592e-01	ci left: 3.070904e-04	ci right 3.703067e-04	k: 449	n:1330000
Cons ci ratio: 7.614958e-03	ci left: 1.655084e-01	ci right 1.667743e-01	k: 220967	n:1330000
KS ci ratio: 2.394279e-01	ci left: 1.773940e-04	ci right 2.263297e-04	k: 267	n:1330000
ATAD2   1330000 perm   1132 sec   (1175 perm/sec)   p_kst 2.007519e-04   p_cons 1.661406e-01   p_joint 3.375940e-04

Joint ci ratio: 1.843501e-01	ci left: 3.062223e-04	ci right 3.691047e-04	k: 451	n:1340000
Cons ci ratio: 7.586213e-03	ci left: 1.655209e-01	ci right 1.667821e-01	k: 222642	n:1340000
KS ci ratio: 2.394281e-01	ci left: 1.760701e-04	ci right 2.246407e-04	k: 267	n:1340000
ATAD2   1340000 perm   1147 sec   (1168 perm/sec)   p_kst 1.992537e-04   p_cons 1.661507e-01   p_joint 3.365672e-04

Joint ci ratio: 1.835397e-01	ci left: 3.067805e-04	ci right 3.694698e-04	k: 455	n:1350000
Cons ci ratio: 7.557953e-03	ci left: 1.655273e-01	ci right 1.667838e-01	k: 224309	n:1350000
KS ci ratio: 2.385397e-01	ci left: 1.761587e-04	ci right 2.245467e-04	k: 269	n:1350000
ATAD2   1350000 perm   1162 sec   (1162 perm/sec)   p_kst 1.992593e-04   p_cons 1.661548e-01   p_joint 3.370370e-04

Joint ci ratio: 1.829390e-01	ci left: 3.066295e-04	ci right 3.690601e-04	k: 458	n:1360000
Cons ci ratio: 7.529786e-03	ci left: 1.655417e-01	ci right 1.667936e-01	k: 225987	n:1360000
KS ci ratio: 2.372253e-01	ci left: 1.769378e-04	ci right 2.252328e-04	k: 272	n:1360000
ATAD2   1360000 perm   1177 sec   (1156 perm/sec)   p_kst 2.000000e-04   p_cons 1.661669e-01   p_joint 3.367647e-04

Joint ci ratio: 1.825418e-01	ci left: 3.057844e-04	ci right 3.678928e-04	k: 460	n:1370000
Cons ci ratio: 7.503612e-03	ci left: 1.654939e-01	ci right 1.667411e-01	k: 227580	n:1370000
KS ci ratio: 2.372255e-01	ci left: 1.756463e-04	ci right 2.235887e-04	k: 272	n:1370000
ATAD2   1370000 perm   1191 sec   (1150 perm/sec)   p_kst 1.985401e-04   p_cons 1.661168e-01   p_joint 3.357664e-04

Joint ci ratio: 1.819508e-01	ci left: 3.056433e-04	ci right 3.674999e-04	k: 463	n:1380000
Cons ci ratio: 7.476203e-03	ci left: 1.655026e-01	ci right 1.667452e-01	k: 229250	n:1380000
KS ci ratio: 2.363613e-01	ci left: 1.757368e-04	ci right 2.235036e-04	k: 274	n:1380000
ATAD2   1380000 perm   1206 sec   (1144 perm/sec)   p_kst 1.985507e-04   p_cons 1.661232e-01   p_joint 3.355072e-04

Joint ci ratio: 1.815600e-01	ci left: 3.048178e-04	ci right 3.663602e-04	k: 465	n:1390000
Cons ci ratio: 7.448609e-03	ci left: 1.655290e-01	ci right 1.667673e-01	k: 230945	n:1390000
KS ci ratio: 2.350824e-01	ci left: 1.765033e-04	ci right 2.241812e-04	k: 277	n:1390000
ATAD2   1390000 perm   1221 sec   (1139 perm/sec)   p_kst 1.992806e-04   p_cons 1.661475e-01   p_joint 3.345324e-04

Joint ci ratio: 1.807857e-01	ci left: 3.053681e-04	ci right 3.667300e-04	k: 469	n:1400000
Cons ci ratio: 7.421127e-03	ci left: 1.655623e-01	ci right 1.667962e-01	k: 232650	n:1400000
KS ci ratio: 2.338240e-01	ci left: 1.772596e-04	ci right 2.248484e-04	k: 280	n:1400000
ATAD2   1400000 perm   1236 sec   (1133 perm/sec)   p_kst 2.000000e-04   p_cons 1.661786e-01   p_joint 3.350000e-04

Joint ci ratio: 1.800212e-01	ci left: 3.059112e-04	ci right 3.670939e-04	k: 473	n:1410000
Cons ci ratio: 7.393757e-03	ci left: 1.656022e-01	ci right 1.668318e-01	k: 234365	n:1410000
KS ci ratio: 2.329963e-01	ci left: 1.773379e-04	ci right 2.247549e-04	k: 282	n:1410000
ATAD2   1410000 perm   1251 sec   (1127 perm/sec)   p_kst 2.000000e-04   p_cons 1.662163e-01   p_joint 3.354610e-04

Joint ci ratio: 1.788924e-01	ci left: 3.077924e-04	ci right 3.689236e-04	k: 479	n:1420000
Cons ci ratio: 7.367287e-03	ci left: 1.656190e-01	ci right 1.668443e-01	k: 236048	n:1420000
KS ci ratio: 2.305647e-01	ci left: 1.800691e-04	ci right 2.276424e-04	k: 288	n:1420000
ATAD2   1420000 perm   1266 sec   (1121 perm/sec)   p_kst 2.028169e-04   p_cons 1.662310e-01   p_joint 3.373239e-04

Joint ci ratio: 1.779678e-01	ci left: 3.089804e-04	ci right 3.699962e-04	k: 484	n:1430000
Cons ci ratio: 7.340932e-03	ci left: 1.656419e-01	ci right 1.668630e-01	k: 237740	n:1430000
KS ci ratio: 2.293771e-01	ci left: 1.807870e-04	ci right 2.282690e-04	k: 291	n:1430000
ATAD2   1430000 perm   1282 sec   (1116 perm/sec)   p_kst 2.034965e-04   p_cons 1.662517e-01   p_joint 3.384615e-04

Joint ci ratio: 1.774199e-01	ci left: 3.088254e-04	ci right 3.696027e-04	k: 487	n:1440000
Cons ci ratio: 7.315097e-03	ci left: 1.656554e-01	ci right 1.668723e-01	k: 239419	n:1440000
KS ci ratio: 2.282078e-01	ci left: 1.814954e-04	ci right 2.288863e-04	k: 294	n:1440000
ATAD2   1440000 perm   1297 sec   (1110 perm/sec)   p_kst 2.041667e-04   p_cons 1.662632e-01   p_joint 3.381944e-04

Joint ci ratio: 1.768771e-01	ci left: 3.086728e-04	ci right 3.692143e-04	k: 490	n:1450000
Cons ci ratio: 7.288045e-03	ci left: 1.657253e-01	ci right 1.669382e-01	k: 241180	n:1450000
KS ci ratio: 2.274381e-01	ci left: 1.815443e-04	ci right 2.287657e-04	k: 296	n:1450000
ATAD2   1450000 perm   1312 sec   (1105 perm/sec)   p_kst 2.041379e-04   p_cons 1.663310e-01   p_joint 3.379310e-04

Joint ci ratio: 1.766974e-01	ci left: 3.072132e-04	ci right 3.674007e-04	k: 491	n:1460000
Cons ci ratio: 7.262834e-03	ci left: 1.657353e-01	ci right 1.669441e-01	k: 242855	n:1460000
KS ci ratio: 2.270562e-01	ci left: 1.809468e-04	ci right 2.279227e-04	k: 297	n:1460000
ATAD2   1460000 perm   1329 sec   (1099 perm/sec)   p_kst 2.034247e-04   p_cons 1.663390e-01   p_joint 3.363014e-04

Joint ci ratio: 1.759834e-01	ci left: 3.077243e-04	ci right 3.677424e-04	k: 495	n:1470000
Cons ci ratio: 7.237705e-03	ci left: 1.657521e-01	ci right 1.669567e-01	k: 244540	n:1470000
KS ci ratio: 2.270564e-01	ci left: 1.797159e-04	ci right 2.263722e-04	k: 297	n:1470000
ATAD2   1470000 perm   1344 sec   (1093 perm/sec)   p_kst 2.020408e-04   p_cons 1.663537e-01   p_joint 3.367347e-04

Joint ci ratio: 1.754537e-01	ci left: 3.075829e-04	ci right 3.673738e-04	k: 498	n:1480000
Cons ci ratio: 7.214030e-03	ci left: 1.657227e-01	ci right 1.669232e-01	k: 246157	n:1480000
KS ci ratio: 2.266765e-01	ci left: 1.791389e-04	ci right 2.255567e-04	k: 298	n:1480000
ATAD2   1480000 perm   1361 sec   (1088 perm/sec)   p_kst 2.013514e-04   p_cons 1.663223e-01   p_joint 3.364865e-04

Joint ci ratio: 1.749286e-01	ci left: 3.074438e-04	ci right 3.670098e-04	k: 501	n:1490000
Cons ci ratio: 7.190028e-03	ci left: 1.657152e-01	ci right 1.669116e-01	k: 247806	n:1490000
KS ci ratio: 2.255477e-01	ci left: 1.798360e-04	ci right 2.261701e-04	k: 301	n:1490000
ATAD2   1490000 perm   1377 sec   (1082 perm/sec)   p_kst 2.020134e-04   p_cons 1.663128e-01   p_joint 3.362416e-04

Joint ci ratio: 1.742358e-01	ci left: 3.079443e-04	ci right 3.673461e-04	k: 505	n:1500000
Cons ci ratio: 7.164818e-03	ci left: 1.657637e-01	ci right 1.669563e-01	k: 249539	n:1500000
KS ci ratio: 2.244357e-01	ci left: 1.805244e-04	ci right 2.267749e-04	k: 304	n:1500000
ATAD2   1500000 perm   1393 sec   (1077 perm/sec)   p_kst 2.026667e-04   p_cons 1.663593e-01   p_joint 3.366667e-04

Joint ci ratio: 1.738926e-01	ci left: 3.071717e-04	ci right 3.662956e-04	k: 507	n:1510000
Cons ci ratio: 7.142105e-03	ci left: 1.657249e-01	ci right 1.669134e-01	k: 251141	n:1510000
KS ci ratio: 2.240687e-01	ci left: 1.799539e-04	ci right 2.259724e-04	k: 305	n:1510000
ATAD2   1510000 perm   1410 sec   (1071 perm/sec)   p_kst 2.019868e-04   p_cons 1.663185e-01   p_joint 3.357616e-04

Joint ci ratio: 1.733814e-01	ci left: 3.070388e-04	ci right 3.659451e-04	k: 510	n:1520000
Cons ci ratio: 7.118390e-03	ci left: 1.657340e-01	ci right 1.669186e-01	k: 252815	n:1520000
KS ci ratio: 2.237035e-01	ci left: 1.793910e-04	ci right 2.251805e-04	k: 306	n:1520000
ATAD2   1520000 perm   1427 sec   (1065 perm/sec)   p_kst 2.013158e-04   p_cons 1.663257e-01   p_joint 3.355263e-04

Joint ci ratio: 1.728747e-01	ci left: 3.069078e-04	ci right 3.655990e-04	k: 513	n:1530000
Cons ci ratio: 7.095177e-03	ci left: 1.657325e-01	ci right 1.669132e-01	k: 254473	n:1530000
KS ci ratio: 2.233402e-01	ci left: 1.788355e-04	ci right 2.243989e-04	k: 307	n:1530000
ATAD2   1530000 perm   1443 sec   (1060 perm/sec)   p_kst 2.006536e-04   p_cons 1.663222e-01   p_joint 3.352941e-04

Joint ci ratio: 1.798341e-01	ci left: 2.807073e-04	ci right 3.367844e-04	k: 474	n:1540000
Cons ci ratio: 7.071577e-03	ci left: 1.657550e-01	ci right 1.669320e-01	k: 256168	n:1540000
KS ci ratio: 2.229786e-01	ci left: 1.782873e-04	ci right 2.236273e-04	k: 308	n:1540000
ATAD2   1540000 perm   1459 sec   (1055 perm/sec)   p_kst 2.000000e-04   p_cons 1.663429e-01   p_joint 3.077922e-04

Joint ci ratio: 1.813686e-01	ci left: 2.739682e-04	ci right 3.292174e-04	k: 466	n:1550000
Cons ci ratio: 7.049309e-03	ci left: 1.657341e-01	ci right 1.669072e-01	k: 257796	n:1550000
KS ci ratio: 2.222604e-01	ci left: 1.783554e-04	ci right 2.235467e-04	k: 310	n:1550000
ATAD2   1550000 perm   1476 sec   (1050 perm/sec)   p_kst 2.000000e-04   p_cons 1.663200e-01   p_joint 3.006452e-04

Joint ci ratio: 1.804053e-01	ci left: 2.752720e-04	ci right 3.304571e-04	k: 471	n:1560000
Cons ci ratio: 7.026618e-03	ci left: 1.657384e-01	ci right 1.669077e-01	k: 259463	n:1560000
KS ci ratio: 2.219040e-01	ci left: 1.778175e-04	ci right 2.227904e-04	k: 311	n:1560000
ATAD2   1560000 perm   1492 sec   (1046 perm/sec)   p_kst 1.993590e-04   p_cons 1.663224e-01   p_joint 3.019231e-04

Joint ci ratio: 1.807890e-01	ci left: 2.723023e-04	ci right 3.270209e-04	k: 469	n:1570000
Cons ci ratio: 7.003870e-03	ci left: 1.657535e-01	ci right 1.669191e-01	k: 261147	n:1570000
KS ci ratio: 2.208448e-01	ci left: 1.784898e-04	ci right 2.233879e-04	k: 314	n:1570000
ATAD2   1570000 perm   1508 sec   (1041 perm/sec)   p_kst 2.000000e-04   p_cons 1.663357e-01   p_joint 2.987261e-04

Joint ci ratio: 1.800245e-01	ci left: 2.729962e-04	ci right 3.275970e-04	k: 473	n:1580000
Cons ci ratio: 6.980896e-03	ci left: 1.657861e-01	ci right 1.669481e-01	k: 262859	n:1580000
KS ci ratio: 2.198005e-01	ci left: 1.791540e-04	ci right 2.239774e-04	k: 317	n:1580000
ATAD2   1580000 perm   1525 sec   (1036 perm/sec)   p_kst 2.006329e-04   p_cons 1.663665e-01   p_joint 2.993671e-04

Joint ci ratio: 1.950024e-01	ci left: 2.293169e-04	ci right 2.794512e-04	k: 403	n:1590000
Cons ci ratio: 6.958856e-03	ci left: 1.657900e-01	ci right 1.669483e-01	k: 264526	n:1590000
KS ci ratio: 2.191125e-01	ci left: 1.792160e-04	ci right 2.238957e-04	k: 319	n:1590000
ATAD2   1590000 perm   1542 sec   (1031 perm/sec)   p_kst 2.006289e-04   p_cons 1.663686e-01   p_joint 2.534591e-04

Joint ci ratio: 1.947617e-01	ci left: 2.284781e-04	ci right 2.783601e-04	k: 404	n:1600000
Cons ci ratio: 6.937102e-03	ci left: 1.657907e-01	ci right 1.669455e-01	k: 266188	n:1600000
KS ci ratio: 2.187710e-01	ci left: 1.786866e-04	ci right 2.231555e-04	k: 320	n:1600000
ATAD2   1600000 perm   1559 sec   (1027 perm/sec)   p_kst 2.000000e-04   p_cons 1.663675e-01   p_joint 2.525000e-04

Joint ci ratio: 1.940443e-01	ci left: 2.288317e-04	ci right 2.785851e-04	k: 407	n:1610000
Cons ci ratio: 6.916356e-03	ci left: 1.657592e-01	ci right 1.669103e-01	k: 267798	n:1610000
KS ci ratio: 2.187712e-01	ci left: 1.775768e-04	ci right 2.217695e-04	k: 320	n:1610000
ATAD2   1610000 perm   1576 sec   (1022 perm/sec)   p_kst 1.987578e-04   p_cons 1.663342e-01   p_joint 2.527950e-04

Joint ci ratio: 1.933348e-01	ci left: 2.291812e-04	ci right 2.788070e-04	k: 410	n:1620000
Cons ci ratio: 6.894859e-03	ci left: 1.657657e-01	ci right 1.669132e-01	k: 269469	n:1620000
KS ci ratio: 2.180928e-01	ci left: 1.776476e-04	ci right 2.217025e-04	k: 322	n:1620000
ATAD2   1620000 perm   1593 sec   (1017 perm/sec)   p_kst 1.987654e-04   p_cons 1.663389e-01   p_joint 2.530864e-04

Joint ci ratio: 1.924007e-01	ci left: 2.301107e-04	ci right 2.796688e-04	k: 414	n:1630000
Cons ci ratio: 6.873166e-03	ci left: 1.657881e-01	ci right 1.669321e-01	k: 271166	n:1630000
KS ci ratio: 2.177561e-01	ci left: 1.771378e-04	ci right 2.209893e-04	k: 323	n:1630000
ATAD2   1630000 perm   1610 sec   (1013 perm/sec)   p_kst 1.981595e-04   p_cons 1.663595e-01   p_joint 2.539877e-04

Joint ci ratio: 1.914800e-01	ci left: 2.310294e-04	ci right 2.805196e-04	k: 418	n:1640000
Cons ci ratio: 6.852399e-03	ci left: 1.657810e-01	ci right 1.669214e-01	k: 272815	n:1640000
KS ci ratio: 2.164241e-01	ci left: 1.783641e-04	ci right 2.222133e-04	k: 327	n:1640000
ATAD2   1640000 perm   1627 sec   (1008 perm/sec)   p_kst 1.993902e-04   p_cons 1.663506e-01   p_joint 2.548780e-04

Joint ci ratio: 1.912520e-01	ci left: 2.302063e-04	ci right 2.794546e-04	k: 419	n:1650000
Cons ci ratio: 6.830953e-03	ci left: 1.658090e-01	ci right 1.669461e-01	k: 274522	n:1650000
KS ci ratio: 2.160950e-01	ci left: 1.778563e-04	ci right 2.215054e-04	k: 328	n:1650000
ATAD2   1650000 perm   1645 sec   (1003 perm/sec)   p_kst 1.987879e-04   p_cons 1.663770e-01   p_joint 2.539394e-04

Joint ci ratio: 1.901235e-01	ci left: 2.316877e-04	ci right 2.809267e-04	k: 424	n:1660000
Cons ci ratio: 6.810107e-03	ci left: 1.658205e-01	ci right 1.669542e-01	k: 276202	n:1660000
KS ci ratio: 2.151164e-01	ci left: 1.784946e-04	ci right 2.220756e-04	k: 331	n:1660000
ATAD2   1660000 perm   1662 sec   (999 perm/sec)   p_kst 1.993976e-04   p_cons 1.663867e-01   p_joint 2.554217e-04

Joint ci ratio: 1.912523e-01	ci left: 2.274493e-04	ci right 2.761078e-04	k: 419	n:1670000
Cons ci ratio: 6.789890e-03	ci left: 1.658139e-01	ci right 1.669442e-01	k: 277852	n:1670000
KS ci ratio: 2.141509e-01	ci left: 1.791256e-04	ci right 2.226387e-04	k: 334	n:1670000
ATAD2   1670000 perm   1680 sec   (994 perm/sec)   p_kst 2.000000e-04   p_cons 1.663784e-01   p_joint 2.508982e-04

Joint ci ratio: 1.919393e-01	ci left: 2.243953e-04	ci right 2.725931e-04	k: 416	n:1680000
Cons ci ratio: 6.769751e-03	ci left: 1.658115e-01	ci right 1.669384e-01	k: 279509	n:1680000
KS ci ratio: 2.131984e-01	ci left: 1.797495e-04	ci right 2.231946e-04	k: 337	n:1680000
ATAD2   1680000 perm   1697 sec   (990 perm/sec)   p_kst 2.005952e-04   p_cons 1.663744e-01   p_joint 2.476190e-04

Joint ci ratio: 1.917097e-01	ci left: 2.236308e-04	ci right 2.716003e-04	k: 417	n:1690000
Cons ci ratio: 6.749833e-03	ci left: 1.658074e-01	ci right 1.669310e-01	k: 281163	n:1690000
KS ci ratio: 2.125704e-01	ci left: 1.798063e-04	ci right 2.231203e-04	k: 339	n:1690000
ATAD2   1690000 perm   1715 sec   (985 perm/sec)   p_kst 2.005917e-04   p_cons 1.663686e-01   p_joint 2.467456e-04

Joint ci ratio: 1.945230e-01	ci left: 2.155977e-04	ci right 2.626031e-04	k: 405	n:1700000
Cons ci ratio: 6.730218e-03	ci left: 1.657981e-01	ci right 1.669183e-01	k: 282808	n:1700000
KS ci ratio: 2.122585e-01	ci left: 1.793055e-04	ci right 2.224273e-04	k: 340	n:1700000
ATAD2   1700000 perm   1733 sec   (981 perm/sec)   p_kst 2.000000e-04   p_cons 1.663576e-01   p_joint 2.382353e-04

Joint ci ratio: 1.935717e-01	ci left: 2.165624e-04	ci right 2.635200e-04	k: 409	n:1710000
Cons ci ratio: 6.710603e-03	ci left: 1.657959e-01	ci right 1.669128e-01	k: 284465	n:1710000
KS ci ratio: 2.110244e-01	ci left: 1.804722e-04	ci right 2.235896e-04	k: 344	n:1710000
ATAD2   1710000 perm   1751 sec   (977 perm/sec)   p_kst 2.011696e-04   p_cons 1.663538e-01   p_joint 2.391813e-04

Joint ci ratio: 1.931014e-01	ci left: 2.164098e-04	ci right 2.632069e-04	k: 411	n:1720000
Cons ci ratio: 6.691327e-03	ci left: 1.657868e-01	ci right 1.669004e-01	k: 286110	n:1720000
KS ci ratio: 2.107192e-01	ci left: 1.799736e-04	ci right 2.229017e-04	k: 345	n:1720000
ATAD2   1720000 perm   1769 sec   (972 perm/sec)   p_kst 2.005814e-04   p_cons 1.663430e-01   p_joint 2.389535e-04

Joint ci ratio: 1.928675e-01	ci left: 2.157090e-04	ci right 2.622915e-04	k: 412	n:1730000
Cons ci ratio: 6.671827e-03	ci left: 1.657939e-01	ci right 1.669043e-01	k: 287783	n:1730000
KS ci ratio: 2.104155e-01	ci left: 1.794808e-04	ci right 2.222217e-04	k: 346	n:1730000
ATAD2   1730000 perm   1787 sec   (968 perm/sec)   p_kst 2.000000e-04   p_cons 1.663486e-01   p_joint 2.381503e-04

Joint ci ratio: 1.928676e-01	ci left: 2.144693e-04	ci right 2.607841e-04	k: 412	n:1740000
Cons ci ratio: 6.652882e-03	ci left: 1.657849e-01	ci right 1.668921e-01	k: 289428	n:1740000
KS ci ratio: 2.098117e-01	ci left: 1.795383e-04	ci right 2.221544e-04	k: 348	n:1740000
ATAD2   1740000 perm   1806 sec   (964 perm/sec)   p_kst 2.000000e-04   p_cons 1.663379e-01   p_joint 2.367816e-04

Joint ci ratio: 1.921709e-01	ci left: 2.148754e-04	ci right 2.610907e-04	k: 415	n:1750000
Cons ci ratio: 6.632335e-03	ci left: 1.658496e-01	ci right 1.669538e-01	k: 291202	n:1750000
KS ci ratio: 2.098118e-01	ci left: 1.785123e-04	ci right 2.208849e-04	k: 348	n:1750000
ATAD2   1750000 perm   1824 sec   (960 perm/sec)   p_kst 1.988571e-04   p_cons 1.664011e-01   p_joint 2.371429e-04

Joint ci ratio: 1.914817e-01	ci left: 2.152772e-04	ci right 2.613935e-04	k: 418	n:1760000
Cons ci ratio: 6.613088e-03	ci left: 1.658671e-01	ci right 1.669681e-01	k: 292894	n:1760000
KS ci ratio: 2.095119e-01	ci left: 1.780364e-04	ci right 2.202279e-04	k: 349	n:1760000
ATAD2   1760000 perm   1842 sec   (956 perm/sec)   p_kst 1.982955e-04   p_cons 1.664170e-01   p_joint 2.375000e-04

Joint ci ratio: 1.905741e-01	ci left: 2.162128e-04	ci right 2.622845e-04	k: 422	n:1770000
Cons ci ratio: 6.594463e-03	ci left: 1.658651e-01	ci right 1.669631e-01	k: 294552	n:1770000
KS ci ratio: 2.092133e-01	ci left: 1.775659e-04	ci right 2.195782e-04	k: 350	n:1770000
ATAD2   1770000 perm   1860 sec   (952 perm/sec)   p_kst 1.977401e-04   p_cons 1.664136e-01   p_joint 2.384181e-04

Joint ci ratio: 1.924027e-01	ci left: 2.107191e-04	ci right 2.561015e-04	k: 414	n:1780000
Cons ci ratio: 6.575143e-03	ci left: 1.658991e-01	ci right 1.669941e-01	k: 296274	n:1780000
KS ci ratio: 2.080312e-01	ci left: 1.786982e-04	ci right 2.207090e-04	k: 354	n:1780000
ATAD2   1780000 perm   1878 sec   (948 perm/sec)   p_kst 1.988764e-04   p_cons 1.664461e-01   p_joint 2.325843e-04

Joint ci ratio: 1.492030e-01	ci left: 3.567127e-04	ci right 4.147561e-04	k: 689	n:1790000
Cons ci ratio: 6.556401e-03	ci left: 1.659155e-01	ci right 1.670074e-01	k: 297965	n:1790000
KS ci ratio: 2.071577e-01	ci left: 1.792887e-04	ci right 2.212390e-04	k: 357	n:1790000
ATAD2   1790000 perm   1897 sec   (944 perm/sec)   p_kst 1.994413e-04   p_cons 1.664609e-01   p_joint 3.849162e-04

Joint ci ratio: 1.489874e-01	ci left: 3.558006e-04	ci right 4.136045e-04	k: 691	n:1800000
Cons ci ratio: 6.537504e-03	ci left: 1.659449e-01	ci right 1.670339e-01	k: 299680	n:1800000
KS ci ratio: 2.068690e-01	ci left: 1.788194e-04	ci right 2.205942e-04	k: 358	n:1800000
ATAD2   1800000 perm   1916 sec   (939 perm/sec)   p_kst 1.988889e-04   p_cons 1.664889e-01   p_joint 3.838889e-04

Joint ci ratio: 1.488799e-01	ci left: 3.543667e-04	ci right 4.118925e-04	k: 692	n:1810000
Cons ci ratio: 6.519444e-03	ci left: 1.659454e-01	ci right 1.670314e-01	k: 301343	n:1810000
KS ci ratio: 2.065815e-01	ci left: 1.783553e-04	ci right 2.199565e-04	k: 359	n:1810000
ATAD2   1810000 perm   1935 sec   (935 perm/sec)   p_kst 1.983425e-04   p_cons 1.664878e-01   p_joint 3.823204e-04

Joint ci ratio: 1.484521e-01	ci left: 3.545357e-04	ci right 4.119088e-04	k: 696	n:1820000
Cons ci ratio: 6.501147e-03	ci left: 1.659623e-01	ci right 1.670453e-01	k: 303036	n:1820000
KS ci ratio: 2.062953e-01	ci left: 1.778964e-04	ci right 2.193258e-04	k: 360	n:1820000
ATAD2   1820000 perm   1953 sec   (932 perm/sec)   p_kst 1.978022e-04   p_cons 1.665033e-01   p_joint 3.824176e-04

Joint ci ratio: 1.483458e-01	ci left: 3.531245e-04	ci right 4.102247e-04	k: 697	n:1830000
Cons ci ratio: 6.483615e-03	ci left: 1.659529e-01	ci right 1.670329e-01	k: 304681	n:1830000
KS ci ratio: 2.062954e-01	ci left: 1.769243e-04	ci right 2.181273e-04	k: 360	n:1830000
ATAD2   1830000 perm   1972 sec   (928 perm/sec)   p_kst 1.967213e-04   p_cons 1.664923e-01   p_joint 3.808743e-04

Joint ci ratio: 1.538463e-01	ci left: 3.255810e-04	ci right 3.803595e-04	k: 648	n:1840000
Cons ci ratio: 6.466276e-03	ci left: 1.659414e-01	ci right 1.670184e-01	k: 306322	n:1840000
KS ci ratio: 2.060103e-01	ci left: 1.764782e-04	ci right 2.175133e-04	k: 361	n:1840000
ATAD2   1840000 perm   1992 sec   (924 perm/sec)   p_kst 1.961957e-04   p_cons 1.664793e-01   p_joint 3.521739e-04

Joint ci ratio: 1.534920e-01	ci left: 3.253804e-04	ci right 3.799874e-04	k: 651	n:1850000
Cons ci ratio: 6.449037e-03	ci left: 1.659316e-01	ci right 1.670057e-01	k: 307966	n:1850000
KS ci ratio: 2.051619e-01	ci left: 1.770624e-04	ci right 2.180426e-04	k: 364	n:1850000
ATAD2   1850000 perm   2011 sec   (920 perm/sec)   p_kst 1.967568e-04   p_cons 1.664681e-01   p_joint 3.518919e-04

Joint ci ratio: 1.531401e-01	ci left: 3.251821e-04	ci right 3.796192e-04	k: 654	n:1860000
Cons ci ratio: 6.431412e-03	ci left: 1.659445e-01	ci right 1.670157e-01	k: 309652	n:1860000
KS ci ratio: 2.048815e-01	ci left: 1.766204e-04	ci right 2.174355e-04	k: 365	n:1860000
ATAD2   1860000 perm   2030 sec   (916 perm/sec)   p_kst 1.962366e-04   p_cons 1.664796e-01   p_joint 3.516129e-04

Joint ci ratio: 1.567738e-01	ci left: 3.080221e-04	ci right 3.609252e-04	k: 624	n:1870000
Cons ci ratio: 6.413993e-03	ci left: 1.659546e-01	ci right 1.670229e-01	k: 311333	n:1870000
KS ci ratio: 2.043240e-01	ci left: 1.766907e-04	ci right 2.173970e-04	k: 367	n:1870000
ATAD2   1870000 perm   2049 sec   (913 perm/sec)   p_kst 1.962567e-04   p_cons 1.664882e-01   p_joint 3.336898e-04

Joint ci ratio: 1.562744e-01	ci left: 3.084280e-04	ci right 3.612163e-04	k: 628	n:1880000
Cons ci ratio: 6.397131e-03	ci left: 1.659465e-01	ci right 1.670120e-01	k: 312980	n:1880000
KS ci ratio: 2.037710e-01	ci left: 1.767603e-04	ci right 2.173587e-04	k: 369	n:1880000
ATAD2   1880000 perm   2069 sec   (909 perm/sec)   p_kst 1.962766e-04   p_cons 1.664787e-01   p_joint 3.340426e-04

Joint ci ratio: 1.561505e-01	ci left: 3.073045e-04	ci right 3.598549e-04	k: 629	n:1890000
Cons ci ratio: 6.379902e-03	ci left: 1.659602e-01	ci right 1.670229e-01	k: 314668	n:1890000
KS ci ratio: 2.037711e-01	ci left: 1.758251e-04	ci right 2.162087e-04	k: 369	n:1890000
ATAD2   1890000 perm   2088 sec   (905 perm/sec)   p_kst 1.952381e-04   p_cons 1.664910e-01   p_joint 3.328042e-04

Joint ci ratio: 1.559033e-01	ci left: 3.066986e-04	ci right 3.590546e-04	k: 631	n:1900000
Cons ci ratio: 6.363223e-03	ci left: 1.659558e-01	ci right 1.670157e-01	k: 316322	n:1900000
KS ci ratio: 2.037712e-01	ci left: 1.748997e-04	ci right 2.150708e-04	k: 369	n:1900000
ATAD2   1900000 perm   2108 sec   (902 perm/sec)   p_kst 1.942105e-04   p_cons 1.664853e-01   p_joint 3.321053e-04

Joint ci ratio: 1.570258e-01	ci left: 3.005653e-04	ci right 3.522784e-04	k: 622	n:1910000
Cons ci ratio: 6.346158e-03	ci left: 1.659740e-01	ci right 1.670312e-01	k: 318019	n:1910000
KS ci ratio: 2.034964e-01	ci left: 1.744808e-04	ci right 2.144950e-04	k: 370	n:1910000
ATAD2   1910000 perm   2127 sec   (898 perm/sec)   p_kst 1.937173e-04   p_cons 1.665021e-01   p_joint 3.256545e-04

Joint ci ratio: 1.567744e-01	ci left: 3.000006e-04	ci right 3.515262e-04	k: 624	n:1920000
Cons ci ratio: 6.329385e-03	ci left: 1.659853e-01	ci right 1.670397e-01	k: 319703	n:1920000
KS ci ratio: 2.032228e-01	ci left: 1.740664e-04	ci right 2.139251e-04	k: 371	n:1920000
ATAD2   1920000 perm   2146 sec   (894 perm/sec)   p_kst 1.932292e-04   p_cons 1.665120e-01   p_joint 3.250000e-04

Joint ci ratio: 1.565242e-01	ci left: 2.994418e-04	ci right 3.507817e-04	k: 626	n:1930000
Cons ci ratio: 6.312638e-03	ci left: 1.660011e-01	ci right 1.670528e-01	k: 321396	n:1930000
KS ci ratio: 2.029502e-01	ci left: 1.736563e-04	ci right 2.133611e-04	k: 372	n:1930000
ATAD2   1930000 perm   2166 sec   (891 perm/sec)   p_kst 1.927461e-04   p_cons 1.665264e-01   p_joint 3.243523e-04

Joint ci ratio: 1.561511e-01	ci left: 2.993842e-04	ci right 3.505804e-04	k: 629	n:1940000
Cons ci ratio: 6.296818e-03	ci left: 1.659817e-01	ci right 1.670306e-01	k: 323021	n:1940000
KS ci ratio: 2.021389e-01	ci left: 1.742291e-04	ci right 2.138861e-04	k: 375	n:1940000
ATAD2   1940000 perm   2186 sec   (888 perm/sec)   p_kst 1.932990e-04   p_cons 1.665057e-01   p_joint 3.242268e-04

Joint ci ratio: 1.551689e-01	ci left: 3.017917e-04	ci right 3.530447e-04	k: 637	n:1950000
Cons ci ratio: 6.280385e-03	ci left: 1.659948e-01	ci right 1.670411e-01	k: 324709	n:1950000
KS ci ratio: 2.010721e-01	ci left: 1.752834e-04	ci right 2.149439e-04	k: 379	n:1950000
ATAD2   1950000 perm   2205 sec   (884 perm/sec)   p_kst 1.943590e-04   p_cons 1.665174e-01   p_joint 3.266667e-04

Joint ci ratio: 1.546847e-01	ci left: 3.022136e-04	ci right 3.533633e-04	k: 641	n:1960000
Cons ci ratio: 6.264875e-03	ci left: 1.659726e-01	ci right 1.670161e-01	k: 326328	n:1960000
KS ci ratio: 2.000220e-01	ci left: 1.763274e-04	ci right 2.159904e-04	k: 383	n:1960000
ATAD2   1960000 perm   2225 sec   (881 perm/sec)   p_kst 1.954082e-04   p_cons 1.664939e-01   p_joint 3.270408e-04

Joint ci ratio: 1.540858e-01	ci left: 3.031196e-04	ci right 3.542057e-04	k: 646	n:1970000
Cons ci ratio: 6.248234e-03	ci left: 1.660059e-01	ci right 1.670469e-01	k: 328056	n:1970000
KS ci ratio: 1.987322e-01	ci left: 1.778437e-04	ci right 2.175586e-04	k: 388	n:1970000
ATAD2   1970000 perm   2244 sec   (878 perm/sec)   p_kst 1.969543e-04   p_cons 1.665259e-01   p_joint 3.279188e-04

Joint ci ratio: 1.551692e-01	ci left: 2.972190e-04	ci right 3.476956e-04	k: 637	n:1980000
Cons ci ratio: 6.232450e-03	ci left: 1.660066e-01	ci right 1.670449e-01	k: 329720	n:1980000
KS ci ratio: 1.987323e-01	ci left: 1.769455e-04	ci right 2.164598e-04	k: 388	n:1980000
ATAD2   1980000 perm   2265 sec   (874 perm/sec)   p_kst 1.959596e-04   p_cons 1.665253e-01   p_joint 3.217172e-04

Joint ci ratio: 1.600092e-01	ci left: 2.773826e-04	ci right 3.261010e-04	k: 599	n:1990000
Cons ci ratio: 6.216447e-03	ci left: 1.660223e-01	ci right 1.670581e-01	k: 331414	n:1990000
KS ci ratio: 1.974671e-01	ci left: 1.784443e-04	ci right 2.180091e-04	k: 393	n:1990000
ATAD2   1990000 perm   2286 sec   (871 perm/sec)   p_kst 1.974874e-04   p_cons 1.665397e-01   p_joint 3.010050e-04

Joint ci ratio: 1.596106e-01	ci left: 2.774357e-04	ci right 3.260304e-04	k: 602	n:2000000
Cons ci ratio: 6.200980e-03	ci left: 1.660194e-01	ci right 1.670526e-01	k: 333071	n:2000000
KS ci ratio: 1.972171e-01	ci left: 1.780274e-04	ci right 2.174437e-04	k: 394	n:2000000
ATAD2   2000000 perm   2306 sec   (867 perm/sec)   p_kst 1.970000e-04   p_cons 1.665355e-01   p_joint 3.010000e-04

Joint ci ratio: 1.593466e-01	ci left: 2.770107e-04	ci right 3.254431e-04	k: 604	n:2010000
Cons ci ratio: 6.185218e-03	ci left: 1.660349e-01	ci right 1.670655e-01	k: 334765	n:2010000
KS ci ratio: 1.969680e-01	ci left: 1.776146e-04	ci right 2.168839e-04	k: 395	n:2010000
ATAD2   2010000 perm   2327 sec   (864 perm/sec)   p_kst 1.965174e-04   p_cons 1.665498e-01   p_joint 3.004975e-04

Joint ci ratio: 1.606806e-01	ci left: 2.708870e-04	ci right 3.186835e-04	k: 594	n:2020000
Cons ci ratio: 6.170038e-03	ci left: 1.660295e-01	ci right 1.670576e-01	k: 336417	n:2020000
KS ci ratio: 1.969681e-01	ci left: 1.767353e-04	ci right 2.158103e-04	k: 395	n:2020000
ATAD2   2020000 perm   2348 sec   (860 perm/sec)   p_kst 1.955446e-04   p_cons 1.665431e-01   p_joint 2.940594e-04

Joint ci ratio: 1.621874e-01	ci left: 2.643527e-04	ci right 3.114763e-04	k: 583	n:2030000
Cons ci ratio: 6.155067e-03	ci left: 1.660197e-01	ci right 1.670452e-01	k: 338060	n:2030000
KS ci ratio: 1.962261e-01	ci left: 1.772698e-04	ci right 2.162976e-04	k: 398	n:2030000
ATAD2   2030000 perm   2368 sec   (857 perm/sec)   p_kst 1.960591e-04   p_cons 1.665320e-01   p_joint 2.871921e-04

Joint ci ratio: 1.620488e-01	ci left: 2.635272e-04	ci right 3.104595e-04	k: 584	n:2040000
Cons ci ratio: 6.140519e-03	ci left: 1.659959e-01	ci right 1.670188e-01	k: 339674	n:2040000
KS ci ratio: 1.957362e-01	ci left: 1.773331e-04	ci right 2.162658e-04	k: 400	n:2040000
ATAD2   2040000 perm   2389 sec   (854 perm/sec)   p_kst 1.960784e-04   p_cons 1.665069e-01   p_joint 2.862745e-04

Joint ci ratio: 1.616349e-01	ci left: 2.636458e-04	ci right 3.104677e-04	k: 587	n:2050000
Cons ci ratio: 6.125762e-03	ci left: 1.659864e-01	ci right 1.670068e-01	k: 341317	n:2050000
KS ci ratio: 1.954926e-01	ci left: 1.769320e-04	ci right 2.157225e-04	k: 401	n:2050000
ATAD2   2050000 perm   2410 sec   (851 perm/sec)   p_kst 1.956098e-04   p_cons 1.664961e-01   p_joint 2.863415e-04

Joint ci ratio: 1.616350e-01	ci left: 2.623660e-04	ci right 3.089606e-04	k: 587	n:2060000
Cons ci ratio: 6.111217e-03	ci left: 1.659721e-01	ci right 1.669900e-01	k: 342950	n:2060000
KS ci ratio: 1.954927e-01	ci left: 1.760731e-04	ci right 2.146753e-04	k: 401	n:2060000
ATAD2   2060000 perm   2430 sec   (848 perm/sec)   p_kst 1.946602e-04   p_cons 1.664806e-01   p_joint 2.849515e-04

Joint ci ratio: 1.610879e-01	ci left: 2.629529e-04	ci right 3.094784e-04	k: 591	n:2070000
Cons ci ratio: 6.097412e-03	ci left: 1.659291e-01	ci right 1.669443e-01	k: 344523	n:2070000
KS ci ratio: 1.952501e-01	ci left: 1.756820e-04	ci right 2.141449e-04	k: 402	n:2070000
ATAD2   2070000 perm   2451 sec   (845 perm/sec)   p_kst 1.942029e-04   p_cons 1.664362e-01   p_joint 2.855072e-04

Joint ci ratio: 1.606813e-01	ci left: 2.630729e-04	ci right 3.094908e-04	k: 594	n:2080000
Cons ci ratio: 6.083289e-03	ci left: 1.659051e-01	ci right 1.669179e-01	k: 346135	n:2080000
KS ci ratio: 1.947674e-01	ci left: 1.757519e-04	ci right 2.141238e-04	k: 404	n:2080000
ATAD2   2080000 perm   2471 sec   (842 perm/sec)   p_kst 1.942308e-04   p_cons 1.664111e-01   p_joint 2.855769e-04

Joint ci ratio: 1.630279e-01	ci left: 2.540096e-04	ci right 2.995470e-04	k: 577	n:2090000
Cons ci ratio: 6.068688e-03	ci left: 1.659077e-01	ci right 1.669181e-01	k: 347802	n:2090000
KS ci ratio: 1.940499e-01	ci left: 1.762766e-04	ci right 2.146045e-04	k: 407	n:2090000
ATAD2   2090000 perm   2492 sec   (839 perm/sec)   p_kst 1.947368e-04   p_cons 1.664124e-01   p_joint 2.760766e-04

Joint ci ratio: 1.626065e-01	ci left: 2.541704e-04	ci right 2.996073e-04	k: 580	n:2100000
Cons ci ratio: 6.054857e-03	ci left: 1.658799e-01	ci right 1.668877e-01	k: 349405	n:2100000
KS ci ratio: 1.933404e-01	ci left: 1.767965e-04	ci right 2.150803e-04	k: 410	n:2100000
ATAD2   2100000 perm   2513 sec   (836 perm/sec)   p_kst 1.952381e-04   p_cons 1.663833e-01   p_joint 2.761905e-04

Joint ci ratio: 1.297761e-01	ci left: 4.041740e-04	ci right 4.607189e-04	k: 911	n:2110000
Cons ci ratio: 6.040614e-03	ci left: 1.658754e-01	ci right 1.668809e-01	k: 351057	n:2110000
KS ci ratio: 1.924063e-01	ci left: 1.777628e-04	ci right 2.160481e-04	k: 414	n:2110000
ATAD2   2110000 perm   2534 sec   (833 perm/sec)   p_kst 1.962085e-04   p_cons 1.663777e-01   p_joint 4.317536e-04

Joint ci ratio: 1.293512e-01	ci left: 4.050060e-04	ci right 4.614676e-04	k: 917	n:2120000
Cons ci ratio: 6.026277e-03	ci left: 1.658800e-01	ci right 1.668831e-01	k: 352728	n:2120000
KS ci ratio: 1.914856e-01	ci left: 1.787204e-04	ci right 2.170064e-04	k: 418	n:2120000
ATAD2   2120000 perm   2555 sec   (830 perm/sec)   p_kst 1.971698e-04   p_cons 1.663811e-01   p_joint 4.325472e-04

Joint ci ratio: 1.289305e-01	ci left: 4.058305e-04	ci right 4.622089e-04	k: 923	n:2130000
Cons ci ratio: 6.011827e-03	ci left: 1.658944e-01	ci right 1.668952e-01	k: 354420	n:2130000
KS ci ratio: 1.908037e-01	ci left: 1.792224e-04	ci right 2.174633e-04	k: 421	n:2130000
ATAD2   2130000 perm   2576 sec   (827 perm/sec)   p_kst 1.976526e-04   p_cons 1.663944e-01   p_joint 4.333333e-04

Joint ci ratio: 1.288609e-01	ci left: 4.043863e-04	ci right 4.605314e-04	k: 924	n:2140000
Cons ci ratio: 5.997441e-03	ci left: 1.659106e-01	ci right 1.669090e-01	k: 356116	n:2140000
KS ci ratio: 1.905780e-01	ci left: 1.788299e-04	ci right 2.169367e-04	k: 422	n:2140000
ATAD2   2140000 perm   2597 sec   (824 perm/sec)   p_kst 1.971963e-04   p_cons 1.664093e-01   p_joint 4.317757e-04

Joint ci ratio: 1.287914e-01	ci left: 4.029555e-04	ci right 4.588695e-04	k: 925	n:2150000
Cons ci ratio: 5.983869e-03	ci left: 1.658936e-01	ci right 1.668897e-01	k: 357741	n:2150000
KS ci ratio: 1.905781e-01	ci left: 1.779981e-04	ci right 2.159277e-04	k: 422	n:2150000
ATAD2   2150000 perm   2619 sec   (821 perm/sec)   p_kst 1.962791e-04   p_cons 1.663912e-01   p_joint 4.302326e-04

Joint ci ratio: 1.287220e-01	ci left: 4.015380e-04	ci right 4.572230e-04	k: 926	n:2160000
Cons ci ratio: 5.970040e-03	ci left: 1.658929e-01	ci right 1.668867e-01	k: 359401	n:2160000
KS ci ratio: 1.903533e-01	ci left: 1.776149e-04	ci right 2.154131e-04	k: 423	n:2160000
ATAD2   2160000 perm   2641 sec   (818 perm/sec)   p_kst 1.958333e-04   p_cons 1.663894e-01   p_joint 4.287037e-04

Joint ci ratio: 1.285143e-01	ci left: 4.010256e-04	ci right 4.565430e-04	k: 929	n:2170000
Cons ci ratio: 5.956723e-03	ci left: 1.658729e-01	ci right 1.668644e-01	k: 361019	n:2170000
KS ci ratio: 1.901293e-01	ci left: 1.772353e-04	ci right 2.149031e-04	k: 424	n:2170000
ATAD2   2170000 perm   2663 sec   (815 perm/sec)   p_kst 1.953917e-04   p_cons 1.663682e-01   p_joint 4.281106e-04

Joint ci ratio: 1.283764e-01	ci left: 4.000740e-04	ci right 4.553956e-04	k: 931	n:2180000
Cons ci ratio: 5.942747e-03	ci left: 1.658879e-01	ci right 1.668772e-01	k: 362713	n:2180000
KS ci ratio: 1.899060e-01	ci left: 1.768592e-04	ci right 2.143979e-04	k: 425	n:2180000
ATAD2   2180000 perm   2684 sec   (812 perm/sec)   p_kst 1.949541e-04   p_cons 1.663821e-01   p_joint 4.270642e-04

Joint ci ratio: 1.287224e-01	ci left: 3.960374e-04	ci right 4.509598e-04	k: 926	n:2190000
Cons ci ratio: 5.929416e-03	ci left: 1.658773e-01	ci right 1.668642e-01	k: 364351	n:2190000
KS ci ratio: 1.892408e-01	ci left: 1.773565e-04	ci right 2.148537e-04	k: 428	n:2190000
ATAD2   2190000 perm   2707 sec   (809 perm/sec)   p_kst 1.954338e-04   p_cons 1.663703e-01   p_joint 4.228311e-04

Joint ci ratio: 1.124752e-01	ci left: 5.207761e-04	ci right 5.832781e-04	k: 1213	n:2200000
Cons ci ratio: 5.916232e-03	ci left: 1.658640e-01	ci right 1.668487e-01	k: 365983	n:2200000
KS ci ratio: 1.888012e-01	ci left: 1.774164e-04	ci right 2.148291e-04	k: 430	n:2200000
ATAD2   2200000 perm   2729 sec   (806 perm/sec)   p_kst 1.954545e-04   p_cons 1.663559e-01   p_joint 5.513636e-04

Joint ci ratio: 1.121983e-01	ci left: 5.210583e-04	ci right 5.834300e-04	k: 1219	n:2210000
Cons ci ratio: 5.903473e-03	ci left: 1.658351e-01	ci right 1.668174e-01	k: 367580	n:2210000
KS ci ratio: 1.888013e-01	ci left: 1.766136e-04	ci right 2.138570e-04	k: 430	n:2210000
ATAD2   2210000 perm   2751 sec   (803 perm/sec)   p_kst 1.945701e-04   p_cons 1.663258e-01   p_joint 5.515837e-04

Joint ci ratio: 1.120148e-01	ci left: 5.204624e-04	ci right 5.826542e-04	k: 1223	n:2220000
Cons ci ratio: 5.889762e-03	ci left: 1.658549e-01	ci right 1.668351e-01	k: 369285	n:2220000
KS ci ratio: 1.888014e-01	ci left: 1.758180e-04	ci right 2.128937e-04	k: 430	n:2220000
ATAD2   2220000 perm   2773 sec   (801 perm/sec)   p_kst 1.936937e-04   p_cons 1.663446e-01   p_joint 5.509009e-04

Joint ci ratio: 1.117867e-01	ci left: 5.203079e-04	ci right 5.823463e-04	k: 1228	n:2230000
Cons ci ratio: 5.876631e-03	ci left: 1.658518e-01	ci right 1.668298e-01	k: 370939	n:2230000
KS ci ratio: 1.885828e-01	ci left: 1.754568e-04	ci right 2.124086e-04	k: 431	n:2230000
ATAD2   2230000 perm   2795 sec   (798 perm/sec)   p_kst 1.932735e-04   p_cons 1.663404e-01   p_joint 5.506726e-04

Joint ci ratio: 1.114697e-01	ci left: 5.210229e-04	ci right 5.829587e-04	k: 1235	n:2240000
Cons ci ratio: 5.862993e-03	ci left: 1.658768e-01	ci right 1.668526e-01	k: 372656	n:2240000
KS ci ratio: 1.875007e-01	ci left: 1.768006e-04	ci right 2.137975e-04	k: 436	n:2240000
ATAD2   2240000 perm   2818 sec   (795 perm/sec)   p_kst 1.946429e-04   p_cons 1.663643e-01   p_joint 5.513393e-04

Joint ci ratio: 1.115150e-01	ci left: 5.182751e-04	ci right 5.799110e-04	k: 1234	n:2250000
Cons ci ratio: 5.849759e-03	ci left: 1.658869e-01	ci right 1.668606e-01	k: 374340	n:2250000
KS ci ratio: 1.868604e-01	ci left: 1.772857e-04	ci right 2.142430e-04	k: 439	n:2250000
ATAD2   2250000 perm   2840 sec   (792 perm/sec)   p_kst 1.951111e-04   p_cons 1.663733e-01   p_joint 5.484444e-04

Joint ci ratio: 1.117417e-01	ci left: 5.138312e-04	ci right 5.750710e-04	k: 1229	n:2260000
Cons ci ratio: 5.835963e-03	ci left: 1.659279e-01	ci right 1.668995e-01	k: 376094	n:2260000
KS ci ratio: 1.864371e-01	ci left: 1.773449e-04	ci right 2.142213e-04	k: 441	n:2260000
ATAD2   2260000 perm   2863 sec   (789 perm/sec)   p_kst 1.951327e-04   p_cons 1.664133e-01   p_joint 5.438053e-04

Joint ci ratio: 1.115605e-01	ci left: 5.132805e-04	ci right 5.743490e-04	k: 1233	n:2270000
Cons ci ratio: 5.823234e-03	ci left: 1.659223e-01	ci right 1.668918e-01	k: 377743	n:2270000
KS ci ratio: 1.864372e-01	ci left: 1.765636e-04	ci right 2.132776e-04	k: 441	n:2270000
ATAD2   2270000 perm   2885 sec   (787 perm/sec)   p_kst 1.942731e-04   p_cons 1.664066e-01   p_joint 5.431718e-04

Joint ci ratio: 1.113801e-01	ci left: 5.127348e-04	ci right 5.736332e-04	k: 1237	n:2280000
Cons ci ratio: 5.810331e-03	ci left: 1.659290e-01	ci right 1.668964e-01	k: 379420	n:2280000
KS ci ratio: 1.860168e-01	ci left: 1.766255e-04	ci right 2.132602e-04	k: 443	n:2280000
ATAD2   2280000 perm   2908 sec   (784 perm/sec)   p_kst 1.942982e-04   p_cons 1.664123e-01   p_joint 5.425439e-04

Joint ci ratio: 1.121534e-01	ci left: 5.032795e-04	ci right 5.634974e-04	k: 1220	n:2290000
Cons ci ratio: 5.797486e-03	ci left: 1.659370e-01	ci right 1.669023e-01	k: 381100	n:2290000
KS ci ratio: 1.855993e-01	ci left: 1.766870e-04	ci right 2.132429e-04	k: 445	n:2290000
ATAD2   2290000 perm   2930 sec   (781 perm/sec)   p_kst 1.943231e-04   p_cons 1.664192e-01   p_joint 5.327511e-04

Joint ci ratio: 1.119244e-01	ci left: 5.032044e-04	ci right 5.632822e-04	k: 1225	n:2300000
Cons ci ratio: 5.784744e-03	ci left: 1.659441e-01	ci right 1.669072e-01	k: 382778	n:2300000
KS ci ratio: 1.849781e-01	ci left: 1.771626e-04	ci right 2.136805e-04	k: 448	n:2300000
ATAD2   2300000 perm   2953 sec   (779 perm/sec)   p_kst 1.947826e-04   p_cons 1.664252e-01   p_joint 5.326087e-04

Joint ci ratio: 1.117878e-01	ci left: 5.022883e-04	ci right 5.621788e-04	k: 1228	n:2310000
Cons ci ratio: 5.771851e-03	ci left: 1.659623e-01	ci right 1.669234e-01	k: 384482	n:2310000
KS ci ratio: 1.847725e-01	ci left: 1.768085e-04	ci right 2.132084e-04	k: 449	n:2310000
ATAD2   2310000 perm   2976 sec   (776 perm/sec)   p_kst 1.943723e-04   p_cons 1.664424e-01   p_joint 5.316017e-04

Joint ci ratio: 1.141834e-01	ci left: 4.787614e-04	ci right 5.371523e-04	k: 1177	n:2320000
Cons ci ratio: 5.760243e-03	ci left: 1.659227e-01	ci right 1.668816e-01	k: 386052	n:2320000
KS ci ratio: 1.841596e-01	ci left: 1.772798e-04	ci right 2.136421e-04	k: 452	n:2320000
ATAD2   2320000 perm   2998 sec   (774 perm/sec)   p_kst 1.948276e-04   p_cons 1.664017e-01   p_joint 5.073276e-04

Joint ci ratio: 1.307869e-01	ci left: 3.601984e-04	ci right 4.110139e-04	k: 897	n:2330000
Cons ci ratio: 5.747816e-03	ci left: 1.659263e-01	ci right 1.668831e-01	k: 387722	n:2330000
KS ci ratio: 1.837545e-01	ci left: 1.773378e-04	ci right 2.136231e-04	k: 454	n:2330000
ATAD2   2330000 perm   3021 sec   (771 perm/sec)   p_kst 1.948498e-04   p_cons 1.664043e-01   p_joint 3.849785e-04

Joint ci ratio: 1.305690e-01	ci left: 3.598992e-04	ci right 4.105814e-04	k: 900	n:2340000
Cons ci ratio: 5.735283e-03	ci left: 1.659388e-01	ci right 1.668937e-01	k: 389413	n:2340000
KS ci ratio: 1.833519e-01	ci left: 1.773954e-04	ci right 2.136041e-04	k: 456	n:2340000
ATAD2   2340000 perm   3045 sec   (769 perm/sec)   p_kst 1.948718e-04   p_cons 1.664158e-01   p_joint 3.846154e-04

Joint ci ratio: 1.304966e-01	ci left: 3.587793e-04	ci right 4.092737e-04	k: 901	n:2350000
Cons ci ratio: 5.723745e-03	ci left: 1.659070e-01	ci right 1.668598e-01	k: 391000	n:2350000
KS ci ratio: 1.833520e-01	ci left: 1.766405e-04	ci right 2.126951e-04	k: 456	n:2350000
ATAD2   2350000 perm   3069 sec   (766 perm/sec)   p_kst 1.940426e-04   p_cons 1.663830e-01   p_joint 3.834043e-04

Joint ci ratio: 1.303523e-01	ci left: 3.580789e-04	ci right 4.084146e-04	k: 903	n:2360000
Cons ci ratio: 5.710897e-03	ci left: 1.659424e-01	ci right 1.668932e-01	k: 392745	n:2360000
KS ci ratio: 1.831518e-01	ci left: 1.762963e-04	ci right 2.122370e-04	k: 457	n:2360000
ATAD2   2360000 perm   3092 sec   (763 perm/sec)   p_kst 1.936441e-04   p_cons 1.664174e-01   p_joint 3.826271e-04

Joint ci ratio: 1.302084e-01	ci left: 3.573844e-04	ci right 4.075627e-04	k: 905	n:2370000
Cons ci ratio: 5.698829e-03	ci left: 1.659437e-01	ci right 1.668925e-01	k: 394410	n:2370000
KS ci ratio: 1.827532e-01	ci left: 1.763577e-04	ci right 2.122240e-04	k: 459	n:2370000
ATAD2   2370000 perm   3116 sec   (761 perm/sec)   p_kst 1.936709e-04   p_cons 1.664177e-01   p_joint 3.818565e-04

Joint ci ratio: 1.300649e-01	ci left: 3.566957e-04	ci right 4.067179e-04	k: 907	n:2380000
Cons ci ratio: 5.687362e-03	ci left: 1.659195e-01	ci right 1.668662e-01	k: 396014	n:2380000
KS ci ratio: 1.825549e-01	ci left: 1.760176e-04	ci right 2.117717e-04	k: 460	n:2380000
ATAD2   2380000 perm   3139 sec   (758 perm/sec)   p_kst 1.932773e-04   p_cons 1.663924e-01   p_joint 3.810924e-04

Joint ci ratio: 1.297794e-01	ci left: 3.568225e-04	ci right 4.067442e-04	k: 911	n:2390000
Cons ci ratio: 5.675006e-03	ci left: 1.659422e-01	ci right 1.668870e-01	k: 397730	n:2390000
KS ci ratio: 1.819637e-01	ci left: 1.764791e-04	ci right 2.121980e-04	k: 463	n:2390000
ATAD2   2390000 perm   3163 sec   (756 perm/sec)   p_kst 1.937238e-04   p_cons 1.664142e-01   p_joint 3.811715e-04

Joint ci ratio: 1.296374e-01	ci left: 3.561420e-04	ci right 4.059098e-04	k: 913	n:2400000
Cons ci ratio: 5.662951e-03	ci left: 1.659540e-01	ci right 1.668968e-01	k: 399420	n:2400000
KS ci ratio: 1.815728e-01	ci left: 1.765392e-04	ci right 2.121851e-04	k: 465	n:2400000
ATAD2   2400000 perm   3187 sec   (753 perm/sec)   p_kst 1.937500e-04   p_cons 1.664250e-01   p_joint 3.804167e-04

Joint ci ratio: 1.300652e-01	ci left: 3.522555e-04	ci right 4.016551e-04	k: 907	n:2410000
Cons ci ratio: 5.650871e-03	ci left: 1.659706e-01	ci right 1.669115e-01	k: 401122	n:2410000
KS ci ratio: 1.811844e-01	ci left: 1.765989e-04	ci right 2.121721e-04	k: 467	n:2410000
ATAD2   2410000 perm   3211 sec   (751 perm/sec)   p_kst 1.937759e-04   p_cons 1.664407e-01   p_joint 3.763485e-04

Joint ci ratio: 1.297086e-01	ci left: 3.527989e-04	ci right 4.021286e-04	k: 912	n:2420000
Cons ci ratio: 5.639128e-03	ci left: 1.659743e-01	ci right 1.669133e-01	k: 402793	n:2420000
KS ci ratio: 1.806065e-01	ci left: 1.770527e-04	ci right 2.125911e-04	k: 470	n:2420000
ATAD2   2420000 perm   3235 sec   (748 perm/sec)   p_kst 1.942149e-04   p_cons 1.664434e-01   p_joint 3.768595e-04

Joint ci ratio: 1.295668e-01	ci left: 3.521434e-04	ci right 4.013235e-04	k: 914	n:2430000
Cons ci ratio: 5.627225e-03	ci left: 1.659895e-01	ci right 1.669266e-01	k: 404492	n:2430000
KS ci ratio: 1.806065e-01	ci left: 1.763241e-04	ci right 2.117163e-04	k: 470	n:2430000
ATAD2   2430000 perm   3258 sec   (746 perm/sec)   p_kst 1.934156e-04   p_cons 1.664576e-01   p_joint 3.761317e-04

Joint ci ratio: 1.299939e-01	ci left: 3.483209e-04	ci right 3.971399e-04	k: 908	n:2440000
Cons ci ratio: 5.615421e-03	ci left: 1.660033e-01	ci right 1.669385e-01	k: 406188	n:2440000
KS ci ratio: 1.802243e-01	ci left: 1.763841e-04	ci right 2.117052e-04	k: 472	n:2440000
ATAD2   2440000 perm   3282 sec   (743 perm/sec)   p_kst 1.934426e-04   p_cons 1.664705e-01   p_joint 3.721311e-04

Joint ci ratio: 1.298512e-01	ci left: 3.476890e-04	ci right 3.963618e-04	k: 910	n:2450000
Cons ci ratio: 5.603716e-03	ci left: 1.660158e-01	ci right 1.669491e-01	k: 407881	n:2450000
KS ci ratio: 1.800341e-01	ci left: 1.760539e-04	ci right 2.112677e-04	k: 473	n:2450000
ATAD2   2450000 perm   3306 sec   (741 perm/sec)   p_kst 1.930612e-04   p_cons 1.664820e-01   p_joint 3.714286e-04

Joint ci ratio: 1.294256e-01	ci left: 3.486356e-04	ci right 3.972686e-04	k: 916	n:2460000
Cons ci ratio: 5.592682e-03	ci left: 1.659985e-01	ci right 1.669299e-01	k: 409501	n:2460000
KS ci ratio: 1.794670e-01	ci left: 1.765029e-04	ci right 2.116832e-04	k: 476	n:2460000
ATAD2   2460000 perm   3331 sec   (739 perm/sec)   p_kst 1.934959e-04   p_cons 1.664638e-01   p_joint 3.723577e-04

Joint ci ratio: 1.313012e-01	ci left: 3.370409e-04	ci right 3.847910e-04	k: 890	n:2470000
Cons ci ratio: 5.581322e-03	ci left: 1.660008e-01	ci right 1.669303e-01	k: 411169	n:2470000
KS ci ratio: 1.792792e-01	ci left: 1.761750e-04	ci right 2.112492e-04	k: 477	n:2470000
ATAD2   2470000 perm   3355 sec   (736 perm/sec)   p_kst 1.931174e-04   p_cons 1.664652e-01   p_joint 3.603239e-04

Joint ci ratio: 1.310075e-01	ci left: 3.372418e-04	ci right 3.849053e-04	k: 894	n:2480000
Cons ci ratio: 5.570290e-03	ci left: 1.659902e-01	ci right 1.669178e-01	k: 412805	n:2480000
KS ci ratio: 1.790920e-01	ci left: 1.758497e-04	ci right 2.108187e-04	k: 478	n:2480000
ATAD2   2480000 perm   3379 sec   (734 perm/sec)   p_kst 1.927419e-04   p_cons 1.664536e-01   p_joint 3.604839e-04

Joint ci ratio: 1.308614e-01	ci left: 3.366644e-04	ci right 3.841890e-04	k: 896	n:2490000
Cons ci ratio: 5.559250e-03	ci left: 1.659833e-01	ci right 1.669090e-01	k: 414450	n:2490000
KS ci ratio: 1.787193e-01	ci left: 1.759108e-04	ci right 2.108112e-04	k: 480	n:2490000
ATAD2   2490000 perm   3404 sec   (731 perm/sec)   p_kst 1.927711e-04   p_cons 1.664458e-01   p_joint 3.598394e-04

Joint ci ratio: 1.307886e-01	ci left: 3.357046e-04	ci right 3.830653e-04	k: 897	n:2500000
Cons ci ratio: 5.547813e-03	ci left: 1.659996e-01	ci right 1.669235e-01	k: 416153	n:2500000
KS ci ratio: 1.787194e-01	ci left: 1.752071e-04	ci right 2.099679e-04	k: 480	n:2500000
ATAD2   2500000 perm   3429 sec   (729 perm/sec)   p_kst 1.920000e-04   p_cons 1.664612e-01   p_joint 3.588000e-04

Joint ci ratio: 1.306432e-01	ci left: 3.351379e-04	ci right 3.823620e-04	k: 899	n:2510000
Cons ci ratio: 5.537383e-03	ci left: 1.659689e-01	ci right 1.668909e-01	k: 417738	n:2510000
KS ci ratio: 1.785339e-01	ci left: 1.748897e-04	ci right 2.095476e-04	k: 481	n:2510000
ATAD2   2510000 perm   3453 sec   (727 perm/sec)   p_kst 1.916335e-04   p_cons 1.664295e-01   p_joint 3.581673e-04

Joint ci ratio: 1.304983e-01	ci left: 3.345757e-04	ci right 3.816643e-04	k: 901	n:2520000
Cons ci ratio: 5.526103e-03	ci left: 1.659840e-01	ci right 1.669041e-01	k: 419438	n:2520000
KS ci ratio: 1.781647e-01	ci left: 1.749539e-04	ci right 2.095451e-04	k: 483	n:2520000
ATAD2   2520000 perm   3478 sec   (725 perm/sec)   p_kst 1.916667e-04   p_cons 1.664437e-01   p_joint 3.575397e-04

Joint ci ratio: 1.301381e-01	ci left: 3.351651e-04	ci right 3.821964e-04	k: 906	n:2530000
Cons ci ratio: 5.515693e-03	ci left: 1.659586e-01	ci right 1.668769e-01	k: 421036	n:2530000
KS ci ratio: 1.779809e-01	ci left: 1.746400e-04	ci right 2.091297e-04	k: 484	n:2530000
ATAD2   2530000 perm   3503 sec   (722 perm/sec)   p_kst 1.913043e-04   p_cons 1.664174e-01   p_joint 3.581028e-04

Joint ci ratio: 1.299949e-01	ci left: 3.346073e-04	ci right 3.815047e-04	k: 908	n:2540000
Cons ci ratio: 5.504912e-03	ci left: 1.659551e-01	ci right 1.668716e-01	k: 422689	n:2540000
KS ci ratio: 1.777978e-01	ci left: 1.743286e-04	ci right 2.087176e-04	k: 485	n:2540000
ATAD2   2540000 perm   3529 sec   (720 perm/sec)   p_kst 1.909449e-04   p_cons 1.664130e-01   p_joint 3.574803e-04

Joint ci ratio: 1.297809e-01	ci left: 3.344334e-04	ci right 3.812233e-04	k: 911	n:2550000
Cons ci ratio: 5.494186e-03	ci left: 1.659521e-01	ci right 1.668667e-01	k: 424343	n:2550000
KS ci ratio: 1.776152e-01	ci left: 1.740197e-04	ci right 2.083087e-04	k: 486	n:2550000
ATAD2   2550000 perm   3554 sec   (718 perm/sec)   p_kst 1.905882e-04   p_cons 1.664090e-01   p_joint 3.572549e-04

Joint ci ratio: 1.297810e-01	ci left: 3.331270e-04	ci right 3.797341e-04	k: 911	n:2560000
Cons ci ratio: 5.482697e-03	ci left: 1.659908e-01	ci right 1.669037e-01	k: 426104	n:2560000
KS ci ratio: 1.776152e-01	ci left: 1.733399e-04	ci right 2.074950e-04	k: 486	n:2560000
ATAD2   2560000 perm   3579 sec   (715 perm/sec)   p_kst 1.898437e-04   p_cons 1.664469e-01   p_joint 3.558594e-04

Joint ci ratio: 1.294267e-01	ci left: 3.337133e-04	ci right 3.802651e-04	k: 916	n:2570000
Cons ci ratio: 5.472415e-03	ci left: 1.659717e-01	ci right 1.668828e-01	k: 427717	n:2570000
KS ci ratio: 1.770706e-01	ci left: 1.737809e-04	ci right 2.079067e-04	k: 489	n:2570000
ATAD2   2570000 perm   3605 sec   (713 perm/sec)   p_kst 1.902724e-04   p_cons 1.664268e-01   p_joint 3.564202e-04

Joint ci ratio: 1.292155e-01	ci left: 3.335450e-04	ci right 3.799916e-04	k: 919	n:2580000
Cons ci ratio: 5.462251e-03	ci left: 1.659496e-01	ci right 1.668589e-01	k: 429322	n:2580000
KS ci ratio: 1.767104e-01	ci left: 1.738482e-04	ci right 2.079103e-04	k: 491	n:2580000
ATAD2   2580000 perm   3631 sec   (711 perm/sec)   p_kst 1.903101e-04   p_cons 1.664039e-01   p_joint 3.562016e-04

Joint ci ratio: 1.286572e-01	ci left: 3.352463e-04	ci right 3.817128e-04	k: 927	n:2590000
Cons ci ratio: 5.451826e-03	ci left: 1.659439e-01	ci right 1.668514e-01	k: 430969	n:2590000
KS ci ratio: 1.754664e-01	ci left: 1.757606e-04	ci right 2.099293e-04	k: 498	n:2590000
ATAD2   2590000 perm   3657 sec   (708 perm/sec)   p_kst 1.922780e-04   p_cons 1.663973e-01   p_joint 3.579151e-04

Joint ci ratio: 1.283120e-01	ci left: 3.358182e-04	ci right 3.822296e-04	k: 932	n:2600000
Cons ci ratio: 5.441474e-03	ci left: 1.659375e-01	ci right 1.668433e-01	k: 432614	n:2600000
KS ci ratio: 1.747672e-01	ci left: 1.765557e-04	ci right 2.107277e-04	k: 502	n:2600000
ATAD2   2600000 perm   3683 sec   (706 perm/sec)   p_kst 1.930769e-04   p_cons 1.663900e-01   p_joint 3.584615e-04

Joint ci ratio: 1.354733e-01	ci left: 2.989622e-04	ci right 3.427719e-04	k: 836	n:2610000
Cons ci ratio: 5.431024e-03	ci left: 1.659392e-01	ci right 1.668432e-01	k: 434280	n:2610000
KS ci ratio: 1.744208e-01	ci left: 1.766120e-04	ci right 2.107200e-04	k: 504	n:2610000
ATAD2   2610000 perm   3708 sec   (704 perm/sec)   p_kst 1.931034e-04   p_cons 1.663908e-01   p_joint 3.203065e-04

Joint ci ratio: 1.353117e-01	ci left: 2.985587e-04	ci right 3.422528e-04	k: 838	n:2620000
Cons ci ratio: 5.420821e-03	ci left: 1.659313e-01	ci right 1.668336e-01	k: 435921	n:2620000
KS ci ratio: 1.742484e-01	ci left: 1.763029e-04	ci right 2.103141e-04	k: 505	n:2620000
ATAD2   2620000 perm   3734 sec   (702 perm/sec)   p_kst 1.927481e-04   p_cons 1.663821e-01   p_joint 3.198473e-04

Joint ci ratio: 1.350705e-01	ci left: 2.985256e-04	ci right 3.421307e-04	k: 841	n:2630000
Cons ci ratio: 5.410764e-03	ci left: 1.659189e-01	ci right 1.668195e-01	k: 437550	n:2630000
KS ci ratio: 1.742485e-01	ci left: 1.756326e-04	ci right 2.095144e-04	k: 505	n:2630000
ATAD2   2630000 perm   3760 sec   (700 perm/sec)   p_kst 1.920152e-04   p_cons 1.663688e-01   p_joint 3.197719e-04

Joint ci ratio: 1.349904e-01	ci left: 2.977608e-04	ci right 3.412264e-04	k: 842	n:2640000
Cons ci ratio: 5.400555e-03	ci left: 1.659172e-01	ci right 1.668161e-01	k: 439207	n:2640000
KS ci ratio: 1.742485e-01	ci left: 1.749673e-04	ci right 2.087208e-04	k: 505	n:2640000
ATAD2   2640000 perm   3785 sec   (697 perm/sec)   p_kst 1.912879e-04   p_cons 1.663663e-01   p_joint 3.189394e-04

Joint ci ratio: 1.346712e-01	ci left: 2.980957e-04	ci right 3.414990e-04	k: 846	n:2650000
Cons ci ratio: 5.390720e-03	ci left: 1.658994e-01	ci right 1.667965e-01	k: 440821	n:2650000
KS ci ratio: 1.740766e-01	ci left: 1.746679e-04	ci right 2.083270e-04	k: 506	n:2650000
ATAD2   2650000 perm   3811 sec   (695 perm/sec)   p_kst 1.909434e-04   p_cons 1.663475e-01   p_joint 3.192453e-04

Joint ci ratio: 1.343543e-01	ci left: 2.984282e-04	ci right 3.417695e-04	k: 850	n:2660000
Cons ci ratio: 5.381311e-03	ci left: 1.658625e-01	ci right 1.667578e-01	k: 442384	n:2660000
KS ci ratio: 1.735638e-01	ci left: 1.750901e-04	ci right 2.087206e-04	k: 509	n:2660000
ATAD2   2660000 perm   3838 sec   (693 perm/sec)   p_kst 1.913534e-04   p_cons 1.663098e-01   p_joint 3.195489e-04

Joint ci ratio: 1.338051e-01	ci left: 2.998443e-04	ci right 3.431991e-04	k: 857	n:2670000
Cons ci ratio: 5.371450e-03	ci left: 1.658517e-01	ci right 1.667453e-01	k: 444016	n:2670000
KS ci ratio: 1.728871e-01	ci left: 1.758675e-04	ci right 2.095019e-04	k: 513	n:2670000
ATAD2   2670000 perm   3865 sec   (691 perm/sec)   p_kst 1.921348e-04   p_cons 1.662981e-01   p_joint 3.209738e-04

Joint ci ratio: 1.362083e-01	ci left: 2.879093e-04	ci right 3.303468e-04	k: 827	n:2680000
Cons ci ratio: 5.361628e-03	ci left: 1.658417e-01	ci right 1.667336e-01	k: 445650	n:2680000
KS ci ratio: 1.728872e-01	ci left: 1.752112e-04	ci right 2.087202e-04	k: 513	n:2680000
ATAD2   2680000 perm   3892 sec   (689 perm/sec)   p_kst 1.914179e-04   p_cons 1.662873e-01   p_joint 3.085821e-04

Joint ci ratio: 1.358805e-01	ci left: 2.882754e-04	ci right 3.306563e-04	k: 831	n:2690000
Cons ci ratio: 5.351408e-03	ci left: 1.658552e-01	ci right 1.667455e-01	k: 447347	n:2690000
KS ci ratio: 1.723848e-01	ci left: 1.756270e-04	ci right 2.091076e-04	k: 516	n:2690000
ATAD2   2690000 perm   3918 sec   (687 perm/sec)   p_kst 1.918216e-04   p_cons 1.663000e-01   p_joint 3.089219e-04

Joint ci ratio: 1.357175e-01	ci left: 2.879233e-04	ci right 3.301975e-04	k: 833	n:2700000
Cons ci ratio: 5.341653e-03	ci left: 1.658475e-01	ci right 1.667362e-01	k: 448987	n:2700000
KS ci ratio: 1.720523e-01	ci left: 1.756853e-04	ci right 2.091058e-04	k: 518	n:2700000
ATAD2   2700000 perm   3945 sec   (684 perm/sec)   p_kst 1.918519e-04   p_cons 1.662915e-01   p_joint 3.085185e-04

Joint ci ratio: 1.353125e-01	ci left: 2.886433e-04	ci right 3.308866e-04	k: 838	n:2710000
Cons ci ratio: 5.332065e-03	ci left: 1.658340e-01	ci right 1.667210e-01	k: 450611	n:2710000
KS ci ratio: 1.712294e-01	ci left: 1.768028e-04	ci right 2.102584e-04	k: 523	n:2710000
ATAD2   2710000 perm   3972 sec   (682 perm/sec)   p_kst 1.929889e-04   p_cons 1.662771e-01   p_joint 3.092251e-04

Joint ci ratio: 1.351515e-01	ci left: 2.882926e-04	ci right 3.304303e-04	k: 840	n:2720000
Cons ci ratio: 5.322189e-03	ci left: 1.658382e-01	ci right 1.667235e-01	k: 452283	n:2720000
KS ci ratio: 1.709036e-01	ci left: 1.768566e-04	ci right 2.102521e-04	k: 525	n:2720000
ATAD2   2720000 perm   3999 sec   (680 perm/sec)   p_kst 1.930147e-04   p_cons 1.662805e-01   p_joint 3.088235e-04

Joint ci ratio: 1.346719e-01	ci left: 2.893602e-04	ci right 3.314918e-04	k: 846	n:2730000
Cons ci ratio: 5.312277e-03	ci left: 1.658471e-01	ci right 1.667309e-01	k: 453968	n:2730000
KS ci ratio: 1.705796e-01	ci left: 1.769101e-04	ci right 2.102458e-04	k: 527	n:2730000
ATAD2   2730000 perm   4026 sec   (678 perm/sec)   p_kst 1.930403e-04   p_cons 1.662886e-01   p_joint 3.098901e-04

Joint ci ratio: 1.344340e-01	ci left: 2.893622e-04	ci right 3.314137e-04	k: 849	n:2740000
Cons ci ratio: 5.302427e-03	ci left: 1.658556e-01	ci right 1.667378e-01	k: 455652	n:2740000
KS ci ratio: 1.699370e-01	ci left: 1.776620e-04	ci right 2.110005e-04	k: 531	n:2740000
ATAD2   2740000 perm   4052 sec   (676 perm/sec)   p_kst 1.937956e-04   p_cons 1.662964e-01   p_joint 3.098540e-04

Joint ci ratio: 1.341188e-01	ci left: 2.897156e-04	ci right 3.317120e-04	k: 853	n:2750000
Cons ci ratio: 5.292742e-03	ci left: 1.658583e-01	ci right 1.667388e-01	k: 457320	n:2750000
KS ci ratio: 1.694599e-01	ci left: 1.780606e-04	ci right 2.113704e-04	k: 534	n:2750000
ATAD2   2750000 perm   4080 sec   (674 perm/sec)   p_kst 1.941818e-04   p_cons 1.662982e-01   p_joint 3.101818e-04

Joint ci ratio: 1.338838e-01	ci left: 2.897164e-04	ci right 3.316335e-04	k: 856	n:2760000
Cons ci ratio: 5.283366e-03	ci left: 1.658475e-01	ci right 1.667264e-01	k: 458951	n:2760000
KS ci ratio: 1.691440e-01	ci left: 1.781094e-04	ci right 2.113599e-04	k: 536	n:2760000
ATAD2   2760000 perm   4106 sec   (672 perm/sec)   p_kst 1.942029e-04   p_cons 1.662866e-01   p_joint 3.101449e-04

Joint ci ratio: 1.345134e-01	ci left: 2.858794e-04	ci right 3.274513e-04	k: 848	n:2770000
Cons ci ratio: 5.273744e-03	ci left: 1.658523e-01	ci right 1.667296e-01	k: 460625	n:2770000
KS ci ratio: 1.685175e-01	ci left: 1.788494e-04	ci right 2.121019e-04	k: 540	n:2770000
ATAD2   2770000 perm   4133 sec   (670 perm/sec)   p_kst 1.949458e-04   p_cons 1.662906e-01   p_joint 3.061372e-04

Joint ci ratio: 1.342764e-01	ci left: 2.858939e-04	ci right 3.273888e-04	k: 851	n:2780000
Cons ci ratio: 5.264461e-03	ci left: 1.658420e-01	ci right 1.667177e-01	k: 462257	n:2780000
KS ci ratio: 1.683620e-01	ci left: 1.785506e-04	ci right 2.117138e-04	k: 541	n:2780000
ATAD2   2780000 perm   4160 sec   (668 perm/sec)   p_kst 1.946043e-04   p_cons 1.662795e-01   p_joint 3.061151e-04

Joint ci ratio: 1.339623e-01	ci left: 2.862548e-04	ci right 3.276972e-04	k: 855	n:2790000
Cons ci ratio: 5.254956e-03	ci left: 1.658461e-01	ci right 1.667202e-01	k: 463929	n:2790000
KS ci ratio: 1.682069e-01	ci left: 1.782540e-04	ci right 2.113285e-04	k: 542	n:2790000
ATAD2   2790000 perm   4186 sec   (666 perm/sec)   p_kst 1.942652e-04   p_cons 1.662828e-01   p_joint 3.064516e-04

Joint ci ratio: 1.336503e-01	ci left: 2.866132e-04	ci right 3.280032e-04	k: 859	n:2800000
Cons ci ratio: 5.245968e-03	ci left: 1.658255e-01	ci right 1.666980e-01	k: 465532	n:2800000
KS ci ratio: 1.678980e-01	ci left: 1.783016e-04	ci right 2.113180e-04	k: 544	n:2800000
ATAD2   2800000 perm   4214 sec   (664 perm/sec)   p_kst 1.942857e-04   p_cons 1.662614e-01   p_joint 3.067857e-04

Joint ci ratio: 1.331865e-01	ci left: 2.876572e-04	ci right 3.290424e-04	k: 865	n:2810000
Cons ci ratio: 5.236542e-03	ci left: 1.658307e-01	ci right 1.667017e-01	k: 467207	n:2810000
KS ci ratio: 1.675908e-01	ci left: 1.783489e-04	ci right 2.113076e-04	k: 546	n:2810000
ATAD2   2810000 perm   4242 sec   (662 perm/sec)   p_kst 1.943060e-04   p_cons 1.662658e-01   p_joint 3.078292e-04

Joint ci ratio: 1.330330e-01	ci left: 2.873227e-04	ci right 3.286084e-04	k: 867	n:2820000
Cons ci ratio: 5.227153e-03	ci left: 1.658365e-01	ci right 1.667060e-01	k: 468884	n:2820000
KS ci ratio: 1.672852e-01	ci left: 1.783960e-04	ci right 2.112972e-04	k: 548	n:2820000
ATAD2   2820000 perm   4269 sec   (661 perm/sec)   p_kst 1.943262e-04   p_cons 1.662709e-01   p_joint 3.074468e-04

Joint ci ratio: 1.328800e-01	ci left: 2.869906e-04	ci right 3.281774e-04	k: 869	n:2830000
Cons ci ratio: 5.218087e-03	ci left: 1.658279e-01	ci right 1.666958e-01	k: 470520	n:2830000
KS ci ratio: 1.671331e-01	ci left: 1.781042e-04	ci right 2.109187e-04	k: 549	n:2830000
ATAD2   2830000 perm   4296 sec   (659 perm/sec)   p_kst 1.939929e-04   p_cons 1.662615e-01   p_joint 3.070671e-04

Joint ci ratio: 1.325756e-01	ci left: 2.873418e-04	ci right 3.284770e-04	k: 873	n:2840000
Cons ci ratio: 5.208877e-03	ci left: 1.658295e-01	ci right 1.666959e-01	k: 472185	n:2840000
KS ci ratio: 1.666791e-01	ci left: 1.784893e-04	ci right 2.112764e-04	k: 552	n:2840000
ATAD2   2840000 perm   4325 sec   (657 perm/sec)   p_kst 1.943662e-04   p_cons 1.662623e-01   p_joint 3.073944e-04

Joint ci ratio: 1.324241e-01	ci left: 2.870121e-04	ci right 3.280495e-04	k: 875	n:2850000
Cons ci ratio: 5.199649e-03	ci left: 1.658346e-01	ci right 1.666994e-01	k: 473860	n:2850000
KS ci ratio: 1.665286e-01	ci left: 1.781992e-04	ci right 2.109006e-04	k: 553	n:2850000
ATAD2   2850000 perm   4352 sec   (655 perm/sec)   p_kst 1.940351e-04   p_cons 1.662667e-01   p_joint 3.070175e-04

Joint ci ratio: 1.321228e-01	ci left: 2.873609e-04	ci right 3.283473e-04	k: 879	n:2860000
Cons ci ratio: 5.190365e-03	ci left: 1.658452e-01	ci right 1.667086e-01	k: 475551	n:2860000
KS ci ratio: 1.662288e-01	ci left: 1.782464e-04	ci right 2.108916e-04	k: 555	n:2860000
ATAD2   2860000 perm   4380 sec   (653 perm/sec)   p_kst 1.940559e-04   p_cons 1.662766e-01   p_joint 3.073427e-04

Joint ci ratio: 1.320479e-01	ci left: 2.866965e-04	ci right 3.275632e-04	k: 880	n:2870000
Cons ci ratio: 5.181515e-03	ci left: 1.658353e-01	ci right 1.666971e-01	k: 477183	n:2870000
KS ci ratio: 1.660796e-01	ci left: 1.779592e-04	ci right 2.105197e-04	k: 556	n:2870000
ATAD2   2870000 perm   4408 sec   (651 perm/sec)   p_kst 1.937282e-04   p_cons 1.662659e-01   p_joint 3.066202e-04

Joint ci ratio: 1.318236e-01	ci left: 2.867083e-04	ci right 3.275019e-04	k: 883	n:2880000
Cons ci ratio: 5.172685e-03	ci left: 1.658268e-01	ci right 1.666871e-01	k: 478819	n:2880000
KS ci ratio: 1.659307e-01	ci left: 1.776741e-04	ci right 2.101503e-04	k: 557	n:2880000
ATAD2   2880000 perm   4435 sec   (649 perm/sec)   p_kst 1.934028e-04   p_cons 1.662566e-01   p_joint 3.065972e-04

Joint ci ratio: 1.316005e-01	ci left: 2.867201e-04	ci right 3.274409e-04	k: 886	n:2890000
Cons ci ratio: 5.163093e-03	ci left: 1.658615e-01	ci right 1.667204e-01	k: 480580	n:2890000
KS ci ratio: 1.656342e-01	ci left: 1.777227e-04	ci right 2.101439e-04	k: 559	n:2890000
ATAD2   2890000 perm   4464 sec   (647 perm/sec)   p_kst 1.934256e-04   p_cons 1.662907e-01   p_joint 3.065744e-04

Joint ci ratio: 1.314524e-01	ci left: 2.863984e-04	ci right 3.270241e-04	k: 888	n:2900000
Cons ci ratio: 5.154536e-03	ci left: 1.658434e-01	ci right 1.667007e-01	k: 482188	n:2900000
KS ci ratio: 1.656342e-01	ci left: 1.771098e-04	ci right 2.094193e-04	k: 559	n:2900000
ATAD2   2900000 perm   4492 sec   (646 perm/sec)   p_kst 1.927586e-04   p_cons 1.662717e-01   p_joint 3.062069e-04

Joint ci ratio: 1.312312e-01	ci left: 2.864113e-04	ci right 3.269651e-04	k: 891	n:2910000
Cons ci ratio: 5.145906e-03	ci left: 1.658315e-01	ci right 1.666874e-01	k: 483814	n:2910000
KS ci ratio: 1.653392e-01	ci left: 1.771600e-04	ci right 2.094154e-04	k: 561	n:2910000
ATAD2   2910000 perm   4521 sec   (644 perm/sec)   p_kst 1.927835e-04   p_cons 1.662591e-01   p_joint 3.061856e-04

Joint ci ratio: 1.311577e-01	ci left: 2.857616e-04	ci right 3.261991e-04	k: 892	n:2920000
Cons ci ratio: 5.136811e-03	ci left: 1.658471e-01	ci right 1.667015e-01	k: 485520	n:2920000
KS ci ratio: 1.651923e-01	ci left: 1.768816e-04	ci right 2.090548e-04	k: 562	n:2920000
ATAD2   2920000 perm   4550 sec   (642 perm/sec)   p_kst 1.924658e-04   p_cons 1.662740e-01   p_joint 3.054795e-04

Joint ci ratio: 1.310111e-01	ci left: 2.854465e-04	ci right 3.257907e-04	k: 894	n:2930000
Cons ci ratio: 5.127796e-03	ci left: 1.658609e-01	ci right 1.667139e-01	k: 487221	n:2930000
KS ci ratio: 1.647539e-01	ci left: 1.772595e-04	ci right 2.094074e-04	k: 565	n:2930000
ATAD2   2930000 perm   4579 sec   (640 perm/sec)   p_kst 1.928328e-04   p_cons 1.662870e-01   p_joint 3.051195e-04

Joint ci ratio: 1.308650e-01	ci left: 2.851336e-04	ci right 3.253851e-04	k: 896	n:2940000
Cons ci ratio: 5.119306e-03	ci left: 1.658487e-01	ci right 1.667002e-01	k: 488846	n:2940000
KS ci ratio: 1.644636e-01	ci left: 1.773089e-04	ci right 2.094034e-04	k: 567	n:2940000
ATAD2   2940000 perm   4608 sec   (638 perm/sec)   p_kst 1.928571e-04   p_cons 1.662741e-01   p_joint 3.047619e-04

Joint ci ratio: 1.306467e-01	ci left: 2.851507e-04	ci right 3.253323e-04	k: 899	n:2950000
Cons ci ratio: 5.110745e-03	ci left: 1.658427e-01	ci right 1.666928e-01	k: 490489	n:2950000
KS ci ratio: 1.640310e-01	ci left: 1.776830e-04	ci right 2.097523e-04	k: 570	n:2950000
ATAD2   2950000 perm   4637 sec   (636 perm/sec)   p_kst 1.932203e-04   p_cons 1.662675e-01   p_joint 3.047458e-04

Joint ci ratio: 1.304295e-01	ci left: 2.851678e-04	ci right 3.252798e-04	k: 902	n:2960000
Cons ci ratio: 5.102215e-03	ci left: 1.658375e-01	ci right 1.666861e-01	k: 492134	n:2960000
KS ci ratio: 1.638876e-01	ci left: 1.774066e-04	ci right 2.093954e-04	k: 571	n:2960000
ATAD2   2960000 perm   4665 sec   (634 perm/sec)   p_kst 1.929054e-04   p_cons 1.662615e-01   p_joint 3.047297e-04

Joint ci ratio: 1.302853e-01	ci left: 2.848591e-04	ci right 3.248800e-04	k: 904	n:2970000
Cons ci ratio: 5.093789e-03	ci left: 1.658289e-01	ci right 1.666761e-01	k: 493769	n:2970000
KS ci ratio: 1.636018e-01	ci left: 1.774551e-04	ci right 2.093913e-04	k: 573	n:2970000
ATAD2   2970000 perm   4694 sec   (633 perm/sec)   p_kst 1.929293e-04   p_cons 1.662522e-01   p_joint 3.043771e-04

Joint ci ratio: 1.321236e-01	ci left: 2.757892e-04	ci right 3.151254e-04	k: 879	n:2980000
Cons ci ratio: 5.085226e-03	ci left: 1.658301e-01	ci right 1.666759e-01	k: 495433	n:2980000
KS ci ratio: 1.631759e-01	ci left: 1.778252e-04	ci right 2.097365e-04	k: 576	n:2980000
ATAD2   2980000 perm   4722 sec   (631 perm/sec)   p_kst 1.932886e-04   p_cons 1.662527e-01   p_joint 2.949664e-04

Joint ci ratio: 1.318244e-01	ci left: 2.761604e-04	ci right 3.154534e-04	k: 883	n:2990000
Cons ci ratio: 5.076749e-03	ci left: 1.658290e-01	ci right 1.666733e-01	k: 497090	n:2990000
KS ci ratio: 1.628938e-01	ci left: 1.778721e-04	ci right 2.097312e-04	k: 578	n:2990000
ATAD2   2990000 perm   4750 sec   (629 perm/sec)   p_kst 1.933110e-04   p_cons 1.662508e-01   p_joint 2.953177e-04

Joint ci ratio: 1.313792e-01	ci left: 2.771741e-04	ci right 3.164677e-04	k: 889	n:3000000
Cons ci ratio: 5.067790e-03	ci left: 1.658565e-01	ci right 1.666995e-01	k: 498833	n:3000000
KS ci ratio: 1.626132e-01	ci left: 1.779187e-04	ci right 2.097259e-04	k: 580	n:3000000
ATAD2   3000000 perm   4780 sec   (628 perm/sec)   p_kst 1.933333e-04   p_cons 1.662777e-01   p_joint 2.963333e-04

Joint ci ratio: 1.311583e-01	ci left: 2.772172e-04	ci right 3.164457e-04	k: 892	n:3010000
Cons ci ratio: 5.059097e-03	ci left: 1.658719e-01	ci right 1.667135e-01	k: 500540	n:3010000
KS ci ratio: 1.623341e-01	ci left: 1.779650e-04	ci right 2.097205e-04	k: 582	n:3010000
ATAD2   3010000 perm   4809 sec   (626 perm/sec)   p_kst 1.933555e-04   p_cons 1.662924e-01   p_joint 2.963455e-04

Joint ci ratio: 1.311584e-01	ci left: 2.762992e-04	ci right 3.153979e-04	k: 892	n:3020000
Cons ci ratio: 5.050641e-03	ci left: 1.658766e-01	ci right 1.667168e-01	k: 502215	n:3020000
KS ci ratio: 1.623341e-01	ci left: 1.773757e-04	ci right 2.090261e-04	k: 582	n:3020000
ATAD2   3020000 perm   4839 sec   (624 perm/sec)   p_kst 1.927152e-04   p_cons 1.662964e-01   p_joint 2.953642e-04

Joint ci ratio: 1.307199e-01	ci left: 2.773027e-04	ci right 3.164020e-04	k: 898	n:3030000
Cons ci ratio: 5.042606e-03	ci left: 1.658605e-01	ci right 1.666993e-01	k: 503827	n:3030000
KS ci ratio: 1.617800e-01	ci left: 1.780569e-04	ci right 2.097099e-04	k: 586	n:3030000
ATAD2   3030000 perm   4869 sec   (622 perm/sec)   p_kst 1.933993e-04   p_cons 1.662795e-01   p_joint 2.963696e-04

Joint ci ratio: 1.305023e-01	ci left: 2.773451e-04	ci right 3.163802e-04	k: 901	n:3040000
Cons ci ratio: 5.034137e-03	ci left: 1.658704e-01	ci right 1.667079e-01	k: 505518	n:3040000
KS ci ratio: 1.613682e-01	ci left: 1.784182e-04	ci right 2.100467e-04	k: 589	n:3040000
ATAD2   3040000 perm   4898 sec   (621 perm/sec)   p_kst 1.937500e-04   p_cons 1.662888e-01   p_joint 2.963816e-04

Joint ci ratio: 1.301421e-01	ci left: 2.780217e-04	ci right 3.170357e-04	k: 906	n:3050000
Cons ci ratio: 5.025877e-03	ci left: 1.658711e-01	ci right 1.667072e-01	k: 507181	n:3050000
KS ci ratio: 1.608239e-01	ci left: 1.790918e-04	ci right 2.107224e-04	k: 593	n:3050000
ATAD2   3050000 perm   4928 sec   (619 perm/sec)   p_kst 1.944262e-04   p_cons 1.662889e-01   p_joint 2.970492e-04

Joint ci ratio: 1.299989e-01	ci left: 2.777454e-04	ci right 3.166745e-04	k: 908	n:3060000
Cons ci ratio: 5.017503e-03	ci left: 1.658803e-01	ci right 1.667151e-01	k: 508870	n:3060000
KS ci ratio: 1.606887e-01	ci left: 1.788202e-04	ci right 2.103737e-04	k: 594	n:3060000
ATAD2   3060000 perm   4958 sec   (617 perm/sec)   p_kst 1.941176e-04   p_cons 1.662974e-01   p_joint 2.967320e-04

Joint ci ratio: 1.309389e-01	ci left: 2.727444e-04	ci right 3.112704e-04	k: 895	n:3070000
Cons ci ratio: 5.009660e-03	ci left: 1.658625e-01	ci right 1.666958e-01	k: 510476	n:3070000
KS ci ratio: 1.601512e-01	ci left: 1.794883e-04	ci right 2.110436e-04	k: 598	n:3070000
ATAD2   3070000 perm   4989 sec   (615 perm/sec)   p_kst 1.947883e-04   p_cons 1.662788e-01   p_joint 2.915309e-04

Joint ci ratio: 1.321243e-01	ci left: 2.668349e-04	ci right 3.048942e-04	k: 879	n:3080000
Cons ci ratio: 5.001531e-03	ci left: 1.658626e-01	ci right 1.666945e-01	k: 512137	n:3080000
KS ci ratio: 1.600177e-01	ci left: 1.792172e-04	ci right 2.106961e-04	k: 599	n:3080000
ATAD2   3080000 perm   5019 sec   (614 perm/sec)   p_kst 1.944805e-04   p_cons 1.662782e-01   p_joint 2.853896e-04

Joint ci ratio: 1.318996e-01	ci left: 2.669102e-04	ci right 3.049104e-04	k: 882	n:3090000
Cons ci ratio: 4.993570e-03	ci left: 1.658556e-01	ci right 1.666862e-01	k: 513776	n:3090000
KS ci ratio: 1.597517e-01	ci left: 1.792586e-04	ci right 2.106873e-04	k: 601	n:3090000
ATAD2   3090000 perm   5049 sec   (612 perm/sec)   p_kst 1.944984e-04   p_cons 1.662706e-01   p_joint 2.854369e-04

Joint ci ratio: 1.316019e-01	ci left: 2.672970e-04	ci right 3.052596e-04	k: 886	n:3100000
Cons ci ratio: 4.985212e-03	ci left: 1.658728e-01	ci right 1.667021e-01	k: 515490	n:3100000
KS ci ratio: 1.596192e-01	ci left: 1.789900e-04	ci right 2.103431e-04	k: 602	n:3100000
ATAD2   3100000 perm   5080 sec   (610 perm/sec)   p_kst 1.941935e-04   p_cons 1.662871e-01   p_joint 2.858065e-04

Joint ci ratio: 1.316019e-01	ci left: 2.664375e-04	ci right 3.042781e-04	k: 886	n:3110000
Cons ci ratio: 4.977260e-03	ci left: 1.658696e-01	ci right 1.666976e-01	k: 517141	n:3110000
KS ci ratio: 1.594870e-01	ci left: 1.787232e-04	ci right 2.100012e-04	k: 603	n:3110000
ATAD2   3110000 perm   5111 sec   (609 perm/sec)   p_kst 1.938907e-04   p_cons 1.662833e-01   p_joint 2.848875e-04

Joint ci ratio: 1.314538e-01	ci left: 2.662034e-04	ci right 3.039649e-04	k: 888	n:3120000
Cons ci ratio: 4.969069e-03	ci left: 1.658819e-01	ci right 1.667085e-01	k: 518840	n:3120000
KS ci ratio: 1.590924e-01	ci left: 1.790736e-04	ci right 2.103279e-04	k: 606	n:3120000
ATAD2   3120000 perm   5141 sec   (607 perm/sec)   p_kst 1.942308e-04   p_cons 1.662949e-01   p_joint 2.846154e-04

Joint ci ratio: 1.311591e-01	ci left: 2.665889e-04	ci right 3.043137e-04	k: 892	n:3130000
Cons ci ratio: 4.961107e-03	ci left: 1.658835e-01	ci right 1.667088e-01	k: 520506	n:3130000
KS ci ratio: 1.587007e-01	ci left: 1.794218e-04	ci right 2.106525e-04	k: 609	n:3130000
ATAD2   3130000 perm   5171 sec   (605 perm/sec)   p_kst 1.945687e-04   p_cons 1.662958e-01   p_joint 2.849840e-04

Joint ci ratio: 1.308663e-01	ci left: 2.669721e-04	ci right 3.046602e-04	k: 896	n:3140000
Cons ci ratio: 4.953332e-03	ci left: 1.658768e-01	ci right 1.667008e-01	k: 522146	n:3140000
KS ci ratio: 1.581828e-01	ci left: 1.800738e-04	ci right 2.113060e-04	k: 613	n:3140000
ATAD2   3140000 perm   5202 sec   (604 perm/sec)   p_kst 1.952229e-04   p_cons 1.662885e-01   p_joint 2.853503e-04

Joint ci ratio: 1.306480e-01	ci left: 2.670458e-04	ci right 3.046765e-04	k: 899	n:3150000
Cons ci ratio: 4.945655e-03	ci left: 1.658668e-01	ci right 1.666894e-01	k: 523775	n:3150000
KS ci ratio: 1.577978e-01	ci left: 1.804169e-04	ci right 2.116252e-04	k: 616	n:3150000
ATAD2   3150000 perm   5233 sec   (602 perm/sec)   p_kst 1.955556e-04   p_cons 1.662778e-01   p_joint 2.853968e-04

Joint ci ratio: 1.303586e-01	ci left: 2.674252e-04	ci right 3.050195e-04	k: 903	n:3160000
Cons ci ratio: 4.937529e-03	ci left: 1.658839e-01	ci right 1.667053e-01	k: 525490	n:3160000
KS ci ratio: 1.574155e-01	ci left: 1.807579e-04	ci right 2.119422e-04	k: 619	n:3160000
ATAD2   3160000 perm   5263 sec   (600 perm/sec)   p_kst 1.958861e-04   p_cons 1.662943e-01   p_joint 2.857595e-04

Joint ci ratio: 1.303586e-01	ci left: 2.665816e-04	ci right 3.040573e-04	k: 903	n:3170000
Cons ci ratio: 4.929954e-03	ci left: 1.658723e-01	ci right 1.666924e-01	k: 527114	n:3170000
KS ci ratio: 1.574156e-01	ci left: 1.801876e-04	ci right 2.112737e-04	k: 619	n:3170000
ATAD2   3170000 perm   5293 sec   (599 perm/sec)   p_kst 1.952681e-04   p_cons 1.662820e-01   p_joint 2.848580e-04

Joint ci ratio: 1.302147e-01	ci left: 2.663517e-04	ci right 3.037505e-04	k: 905	n:3180000
Cons ci ratio: 4.922078e-03	ci left: 1.658796e-01	ci right 1.666984e-01	k: 528798	n:3180000
KS ci ratio: 1.571623e-01	ci left: 1.802252e-04	ci right 2.112629e-04	k: 621	n:3180000
ATAD2   3180000 perm   5324 sec   (597 perm/sec)   p_kst 1.952830e-04   p_cons 1.662887e-01   p_joint 2.845912e-04

Joint ci ratio: 1.301429e-01	ci left: 2.658200e-04	ci right 3.031220e-04	k: 906	n:3190000
Cons ci ratio: 4.914645e-03	ci left: 1.658640e-01	ci right 1.666815e-01	k: 530409	n:3190000
KS ci ratio: 1.570361e-01	ci left: 1.799614e-04	ci right 2.109265e-04	k: 622	n:3190000
ATAD2   3190000 perm   5354 sec   (596 perm/sec)   p_kst 1.949843e-04   p_cons 1.662724e-01   p_joint 2.840125e-04

Joint ci ratio: 1.299997e-01	ci left: 2.655940e-04	ci right 3.028201e-04	k: 908	n:3200000
Cons ci ratio: 4.906854e-03	ci left: 1.658706e-01	ci right 1.666868e-01	k: 532091	n:3200000
KS ci ratio: 1.569103e-01	ci left: 1.796992e-04	ci right 2.105921e-04	k: 623	n:3200000
ATAD2   3200000 perm   5385 sec   (594 perm/sec)   p_kst 1.946875e-04   p_cons 1.662784e-01   p_joint 2.837500e-04

Joint ci ratio: 1.298569e-01	ci left: 2.653694e-04	ci right 3.025200e-04	k: 910	n:3210000
Cons ci ratio: 4.899181e-03	ci left: 1.658726e-01	ci right 1.666875e-01	k: 533758	n:3210000
KS ci ratio: 1.569103e-01	ci left: 1.791394e-04	ci right 2.099360e-04	k: 623	n:3210000
ATAD2   3210000 perm   5416 sec   (593 perm/sec)   p_kst 1.940810e-04   p_cons 1.662798e-01   p_joint 2.834891e-04

Joint ci ratio: 1.297858e-01	ci left: 2.648457e-04	ci right 3.019012e-04	k: 911	n:3220000
Cons ci ratio: 4.891649e-03	ci left: 1.658686e-01	ci right 1.666823e-01	k: 535406	n:3220000
KS ci ratio: 1.569104e-01	ci left: 1.785831e-04	ci right 2.092841e-04	k: 623	n:3220000
ATAD2   3220000 perm   5447 sec   (591 perm/sec)   p_kst 1.934783e-04   p_cons 1.662752e-01   p_joint 2.829193e-04

Joint ci ratio: 1.297858e-01	ci left: 2.640257e-04	ci right 3.009665e-04	k: 911	n:3230000
Cons ci ratio: 4.884211e-03	ci left: 1.658613e-01	ci right 1.666737e-01	k: 537043	n:3230000
KS ci ratio: 1.569104e-01	ci left: 1.780302e-04	ci right 2.086361e-04	k: 623	n:3230000
ATAD2   3230000 perm   5478 sec   (590 perm/sec)   p_kst 1.928793e-04   p_cons 1.662672e-01   p_joint 2.820433e-04

Joint ci ratio: 1.299285e-01	ci left: 2.626136e-04	ci right 2.994003e-04	k: 909	n:3240000
Cons ci ratio: 4.876346e-03	ci left: 1.658802e-01	ci right 1.666914e-01	k: 538765	n:3240000
KS ci ratio: 1.564098e-01	ci left: 1.786669e-04	ci right 2.092751e-04	k: 627	n:3240000
ATAD2   3240000 perm   5509 sec   (588 perm/sec)   p_kst 1.935185e-04   p_cons 1.662855e-01   p_joint 2.805556e-04

Joint ci ratio: 1.295729e-01	ci left: 2.632941e-04	ci right 3.000674e-04	k: 914	n:3250000
Cons ci ratio: 4.868632e-03	ci left: 1.658926e-01	ci right 1.667025e-01	k: 540466	n:3250000
KS ci ratio: 1.557908e-01	ci left: 1.795955e-04	ci right 2.102297e-04	k: 632	n:3250000
ATAD2   3250000 perm   5540 sec   (587 perm/sec)   p_kst 1.944615e-04   p_cons 1.662972e-01   p_joint 2.812308e-04

Joint ci ratio: 1.291501e-01	ci left: 2.642674e-04	ci right 3.010470e-04	k: 920	n:3260000
Cons ci ratio: 4.861025e-03	ci left: 1.659009e-01	ci right 1.667096e-01	k: 542154	n:3260000
KS ci ratio: 1.555453e-01	ci left: 1.796342e-04	ci right 2.102222e-04	k: 634	n:3260000
ATAD2   3260000 perm   5572 sec   (585 perm/sec)   p_kst 1.944785e-04   p_cons 1.663049e-01   p_joint 2.822086e-04

Joint ci ratio: 1.290801e-01	ci left: 2.637552e-04	ci right 3.004420e-04	k: 921	n:3270000
Cons ci ratio: 4.853185e-03	ci left: 1.659244e-01	ci right 1.667319e-01	k: 543892	n:3270000
KS ci ratio: 1.554230e-01	ci left: 1.793788e-04	ci right 2.098970e-04	k: 635	n:3270000
ATAD2   3270000 perm   5603 sec   (584 perm/sec)   p_kst 1.941896e-04   p_cons 1.663278e-01   p_joint 2.816514e-04

Joint ci ratio: 1.290102e-01	ci left: 2.632461e-04	ci right 2.998408e-04	k: 922	n:3280000
Cons ci ratio: 4.845415e-03	ci left: 1.659459e-01	ci right 1.667522e-01	k: 545624	n:3280000
KS ci ratio: 1.553009e-01	ci left: 1.791249e-04	ci right 2.095738e-04	k: 636	n:3280000
ATAD2   3280000 perm   5635 sec   (582 perm/sec)   p_kst 1.939024e-04   p_cons 1.663488e-01   p_joint 2.810976e-04

Joint ci ratio: 1.288707e-01	ci left: 2.630342e-04	ci right 2.995569e-04	k: 924	n:3290000
Cons ci ratio: 4.838049e-03	ci left: 1.659464e-01	ci right 1.667515e-01	k: 547287	n:3290000
KS ci ratio: 1.550577e-01	ci left: 1.791648e-04	ci right 2.095683e-04	k: 638	n:3290000
ATAD2   3290000 perm   5667 sec   (581 perm/sec)   p_kst 1.939210e-04   p_cons 1.663486e-01   p_joint 2.808511e-04

Joint ci ratio: 1.287316e-01	ci left: 2.628237e-04	ci right 2.992747e-04	k: 926	n:3300000
Cons ci ratio: 4.830826e-03	ci left: 1.659405e-01	ci right 1.667443e-01	k: 548929	n:3300000
KS ci ratio: 1.549366e-01	ci left: 1.789131e-04	ci right 2.092480e-04	k: 639	n:3300000
ATAD2   3300000 perm   5699 sec   (579 perm/sec)   p_kst 1.936364e-04   p_cons 1.663421e-01   p_joint 2.806061e-04

Joint ci ratio: 1.284547e-01	ci left: 2.631992e-04	ci right 2.996179e-04	k: 930	n:3310000
Cons ci ratio: 4.823205e-03	ci left: 1.659594e-01	ci right 1.667621e-01	k: 550653	n:3310000
KS ci ratio: 1.544546e-01	ci left: 1.795343e-04	ci right 2.098710e-04	k: 643	n:3310000
ATAD2   3310000 perm   5731 sec   (578 perm/sec)   p_kst 1.942598e-04   p_cons 1.663604e-01   p_joint 2.809668e-04

Joint ci ratio: 1.281796e-01	ci left: 2.635726e-04	ci right 2.999589e-04	k: 934	n:3320000
Cons ci ratio: 4.815750e-03	ci left: 1.659706e-01	ci right 1.667721e-01	k: 552352	n:3320000
KS ci ratio: 1.543348e-01	ci left: 1.792831e-04	ci right 2.095517e-04	k: 644	n:3320000
ATAD2   3320000 perm   5764 sec   (576 perm/sec)   p_kst 1.939759e-04   p_cons 1.663711e-01   p_joint 2.813253e-04

Joint ci ratio: 1.281112e-01	ci left: 2.630718e-04	ci right 2.993680e-04	k: 935	n:3330000
Cons ci ratio: 4.808586e-03	ci left: 1.659671e-01	ci right 1.667674e-01	k: 554002	n:3330000
KS ci ratio: 1.542154e-01	ci left: 1.790334e-04	ci right 2.092343e-04	k: 645	n:3330000
ATAD2   3330000 perm   5796 sec   (575 perm/sec)   p_kst 1.936937e-04   p_cons 1.663670e-01   p_joint 2.807808e-04

Joint ci ratio: 1.158267e-01	ci left: 3.229553e-04	ci right 3.629493e-04	k: 1144	n:3340000
Cons ci ratio: 4.801282e-03	ci left: 1.659735e-01	ci right 1.667726e-01	k: 555685	n:3340000
KS ci ratio: 1.537401e-01	ci left: 1.796488e-04	ci right 2.098516e-04	k: 649	n:3340000
ATAD2   3340000 perm   5827 sec   (573 perm/sec)   p_kst 1.943114e-04   p_cons 1.663728e-01   p_joint 3.425150e-04

Joint ci ratio: 1.157762e-01	ci left: 3.222811e-04	ci right 3.621730e-04	k: 1145	n:3350000
Cons ci ratio: 4.793980e-03	ci left: 1.659816e-01	ci right 1.667795e-01	k: 557374	n:3350000
KS ci ratio: 1.536220e-01	ci left: 1.793996e-04	ci right 2.095352e-04	k: 650	n:3350000
ATAD2   3350000 perm   5859 sec   (572 perm/sec)   p_kst 1.940299e-04   p_cons 1.663803e-01   p_joint 3.417910e-04

Joint ci ratio: 1.155747e-01	ci left: 3.224779e-04	ci right 3.623200e-04	k: 1149	n:3360000
Cons ci ratio: 4.786927e-03	ci left: 1.659772e-01	ci right 1.667739e-01	k: 559021	n:3360000
KS ci ratio: 1.531521e-01	ci left: 1.800105e-04	ci right 2.101477e-04	k: 654	n:3360000
ATAD2   3360000 perm   5892 sec   (570 perm/sec)   p_kst 1.946429e-04   p_cons 1.663753e-01   p_joint 3.419643e-04

Joint ci ratio: 1.164903e-01	ci left: 3.163347e-04	ci right 3.557488e-04	k: 1131	n:3370000
Cons ci ratio: 4.779721e-03	ci left: 1.659835e-01	ci right 1.667791e-01	k: 560704	n:3370000
KS ci ratio: 1.530354e-01	ci left: 1.797617e-04	ci right 2.098322e-04	k: 655	n:3370000
ATAD2   3370000 perm   5924 sec   (569 perm/sec)   p_kst 1.943620e-04   p_cons 1.663810e-01   p_joint 3.356083e-04

Joint ci ratio: 1.164389e-01	ci left: 3.156861e-04	ci right 3.550007e-04	k: 1132	n:3380000
Cons ci ratio: 4.772573e-03	ci left: 1.659883e-01	ci right 1.667827e-01	k: 562382	n:3380000
KS ci ratio: 1.529189e-01	ci left: 1.795144e-04	ci right 2.095185e-04	k: 656	n:3380000
ATAD2   3380000 perm   5957 sec   (567 perm/sec)   p_kst 1.940828e-04   p_cons 1.663852e-01   p_joint 3.349112e-04

Joint ci ratio: 1.162851e-01	ci left: 3.156140e-04	ci right 3.548642e-04	k: 1135	n:3390000
Cons ci ratio: 4.765492e-03	ci left: 1.659910e-01	ci right 1.667842e-01	k: 564053	n:3390000
KS ci ratio: 1.528027e-01	ci left: 1.792685e-04	ci right 2.092068e-04	k: 657	n:3390000
ATAD2   3390000 perm   5989 sec   (566 perm/sec)   p_kst 1.938053e-04   p_cons 1.663873e-01   p_joint 3.348083e-04

Joint ci ratio: 1.161319e-01	ci left: 3.155425e-04	ci right 3.547285e-04	k: 1138	n:3400000
Cons ci ratio: 4.758605e-03	ci left: 1.659843e-01	ci right 1.667763e-01	k: 565692	n:3400000
KS ci ratio: 1.525710e-01	ci left: 1.793070e-04	ci right 2.092021e-04	k: 659	n:3400000
ATAD2   3400000 perm   6021 sec   (565 perm/sec)   p_kst 1.938235e-04   p_cons 1.663800e-01   p_joint 3.347059e-04

Joint ci ratio: 1.158778e-01	ci left: 3.160409e-04	ci right 3.551970e-04	k: 1143	n:3410000
Cons ci ratio: 4.751475e-03	ci left: 1.659934e-01	ci right 1.667843e-01	k: 567385	n:3410000
KS ci ratio: 1.522254e-01	ci left: 1.796274e-04	ci right 2.095019e-04	k: 662	n:3410000
ATAD2   3410000 perm   6054 sec   (563 perm/sec)   p_kst 1.941349e-04   p_cons 1.663886e-01   p_joint 3.351906e-04

Joint ci ratio: 1.157261e-01	ci left: 3.159685e-04	ci right 3.550610e-04	k: 1146	n:3420000
Cons ci ratio: 4.744423e-03	ci left: 1.659999e-01	ci right 1.667896e-01	k: 569069	n:3420000
KS ci ratio: 1.522254e-01	ci left: 1.791022e-04	ci right 2.088894e-04	k: 662	n:3420000
ATAD2   3420000 perm   6086 sec   (562 perm/sec)   p_kst 1.935673e-04   p_cons 1.663944e-01   p_joint 3.350877e-04

Joint ci ratio: 1.155249e-01	ci left: 3.161798e-04	ci right 3.552258e-04	k: 1150	n:3430000
Cons ci ratio: 4.737422e-03	ci left: 1.660051e-01	ci right 1.667937e-01	k: 570749	n:3430000
KS ci ratio: 1.521108e-01	ci left: 1.788605e-04	ci right 2.085830e-04	k: 663	n:3430000
ATAD2   3430000 perm   6119 sec   (561 perm/sec)   p_kst 1.932945e-04   p_cons 1.663991e-01   p_joint 3.352770e-04

Joint ci ratio: 1.151254e-01	ci left: 3.175192e-04	ci right 3.565858e-04	k: 1158	n:3440000
Cons ci ratio: 4.730581e-03	ci left: 1.660028e-01	ci right 1.667902e-01	k: 572403	n:3440000
KS ci ratio: 1.518822e-01	ci left: 1.788998e-04	ci right 2.085801e-04	k: 665	n:3440000
ATAD2   3440000 perm   6152 sec   (559 perm/sec)   p_kst 1.933140e-04   p_cons 1.663962e-01   p_joint 3.366279e-04

Joint ci ratio: 1.149272e-01	ci left: 3.177249e-04	ci right 3.567449e-04	k: 1162	n:3450000
Cons ci ratio: 4.723947e-03	ci left: 1.659900e-01	ci right 1.667763e-01	k: 574021	n:3450000
KS ci ratio: 1.516546e-01	ci left: 1.789389e-04	ci right 2.085773e-04	k: 667	n:3450000
ATAD2   3450000 perm   6185 sec   (558 perm/sec)   p_kst 1.933333e-04   p_cons 1.663829e-01   p_joint 3.368116e-04

Joint ci ratio: 1.148779e-01	ci left: 3.170873e-04	ci right 3.560112e-04	k: 1163	n:3460000
Cons ci ratio: 4.717409e-03	ci left: 1.659733e-01	ci right 1.667584e-01	k: 575625	n:3460000
KS ci ratio: 1.515413e-01	ci left: 1.786998e-04	ci right 2.082744e-04	k: 668	n:3460000
ATAD2   3460000 perm   6219 sec   (556 perm/sec)   p_kst 1.930636e-04   p_cons 1.663656e-01   p_joint 3.361272e-04

Joint ci ratio: 1.144851e-01	ci left: 3.184129e-04	ci right 3.573568e-04	k: 1171	n:3470000
Cons ci ratio: 4.710591e-03	ci left: 1.659749e-01	ci right 1.667588e-01	k: 577292	n:3470000
KS ci ratio: 1.512026e-01	ci left: 1.790167e-04	ci right 2.085715e-04	k: 671	n:3470000
ATAD2   3470000 perm   6252 sec   (555 perm/sec)   p_kst 1.933718e-04   p_cons 1.663666e-01   p_joint 3.374640e-04

Joint ci ratio: 1.144363e-01	ci left: 3.177770e-04	ci right 3.566255e-04	k: 1172	n:3480000
Cons ci ratio: 4.703572e-03	ci left: 1.659899e-01	ci right 1.667727e-01	k: 579006	n:3480000
KS ci ratio: 1.512027e-01	ci left: 1.785022e-04	ci right 2.079721e-04	k: 671	n:3480000
ATAD2   3480000 perm   6286 sec   (554 perm/sec)   p_kst 1.928161e-04   p_cons 1.663810e-01   p_joint 3.367816e-04

Joint ci ratio: 1.143389e-01	ci left: 3.174232e-04	ci right 3.561931e-04	k: 1174	n:3490000
Cons ci ratio: 4.696833e-03	ci left: 1.659902e-01	ci right 1.667719e-01	k: 580669	n:3490000
KS ci ratio: 1.509782e-01	ci left: 1.785422e-04	ci right 2.079709e-04	k: 673	n:3490000
ATAD2   3490000 perm   6321 sec   (552 perm/sec)   p_kst 1.928367e-04   p_cons 1.663808e-01   p_joint 3.363897e-04

Joint ci ratio: 1.142903e-01	ci left: 3.167938e-04	ci right 3.554693e-04	k: 1175	n:3500000
Cons ci ratio: 4.689871e-03	ci left: 1.660054e-01	ci right 1.667860e-01	k: 582384	n:3500000
KS ci ratio: 1.508663e-01	ci left: 1.783070e-04	ci right 2.076732e-04	k: 674	n:3500000
ATAD2   3500000 perm   6355 sec   (551 perm/sec)   p_kst 1.925714e-04   p_cons 1.663954e-01   p_joint 3.357143e-04

Joint ci ratio: 1.140964e-01	ci left: 3.169983e-04	ci right 3.556287e-04	k: 1179	n:3510000
Cons ci ratio: 4.683084e-03	ci left: 1.660119e-01	ci right 1.667915e-01	k: 584069	n:3510000
KS ci ratio: 1.506433e-01	ci left: 1.783473e-04	ci right 2.076728e-04	k: 676	n:3510000
ATAD2   3510000 perm   6388 sec   (549 perm/sec)   p_kst 1.925926e-04   p_cons 1.664014e-01   p_joint 3.358974e-04

Joint ci ratio: 1.139999e-01	ci left: 3.166497e-04	ci right 3.552028e-04	k: 1181	n:3520000
Cons ci ratio: 4.676461e-03	ci left: 1.660105e-01	ci right 1.667889e-01	k: 585726	n:3520000
KS ci ratio: 1.506433e-01	ci left: 1.778406e-04	ci right 2.070829e-04	k: 676	n:3520000
ATAD2   3520000 perm   6422 sec   (548 perm/sec)   p_kst 1.920455e-04   p_cons 1.663994e-01   p_joint 3.355114e-04

Joint ci ratio: 1.138555e-01	ci left: 3.165783e-04	ci right 3.550706e-04	k: 1184	n:3530000
Cons ci ratio: 4.669971e-03	ci left: 1.660028e-01	ci right 1.667801e-01	k: 587361	n:3530000
KS ci ratio: 1.505322e-01	ci left: 1.776094e-04	ci right 2.067902e-04	k: 677	n:3530000
ATAD2   3530000 perm   6456 sec   (547 perm/sec)   p_kst 1.917847e-04   p_cons 1.663912e-01   p_joint 3.354108e-04

Joint ci ratio: 1.137595e-01	ci left: 3.162329e-04	ci right 3.546486e-04	k: 1186	n:3540000
Cons ci ratio: 4.663707e-03	ci left: 1.659834e-01	ci right 1.667595e-01	k: 588954	n:3540000
KS ci ratio: 1.504213e-01	ci left: 1.773796e-04	ci right 2.064992e-04	k: 678	n:3540000
ATAD2   3540000 perm   6491 sec   (545 perm/sec)   p_kst 1.915254e-04   p_cons 1.663712e-01   p_joint 3.350282e-04

Joint ci ratio: 1.136161e-01	ci left: 3.161632e-04	ci right 3.545187e-04	k: 1189	n:3550000
Cons ci ratio: 4.657407e-03	ci left: 1.659677e-01	ci right 1.667427e-01	k: 590560	n:3550000
KS ci ratio: 1.500901e-01	ci left: 1.776932e-04	ci right 2.067943e-04	k: 681	n:3550000
ATAD2   3550000 perm   6524 sec   (544 perm/sec)   p_kst 1.918310e-04   p_cons 1.663549e-01   p_joint 3.349296e-04

Joint ci ratio: 1.135207e-01	ci left: 3.158209e-04	ci right 3.541006e-04	k: 1191	n:3560000
Cons ci ratio: 4.650868e-03	ci left: 1.659678e-01	ci right 1.667417e-01	k: 592222	n:3560000
KS ci ratio: 1.498705e-01	ci left: 1.777348e-04	ci right 2.067963e-04	k: 683	n:3560000
ATAD2   3560000 perm   6559 sec   (543 perm/sec)   p_kst 1.918539e-04   p_cons 1.663545e-01   p_joint 3.345506e-04

Joint ci ratio: 1.126264e-01	ci left: 3.201079e-04	ci right 3.585813e-04	k: 1210	n:3570000
Cons ci ratio: 4.644653e-03	ci left: 1.659503e-01	ci right 1.667231e-01	k: 593821	n:3570000
KS ci ratio: 1.492174e-01	ci left: 1.788547e-04	ci right 2.079605e-04	k: 689	n:3570000
ATAD2   3570000 perm   6595 sec   (541 perm/sec)   p_kst 1.929972e-04   p_cons 1.663364e-01   p_joint 3.389356e-04

Joint ci ratio: 1.125335e-01	ci left: 3.197567e-04	ci right 3.581541e-04	k: 1212	n:3580000
Cons ci ratio: 4.638326e-03	ci left: 1.659409e-01	ci right 1.667127e-01	k: 595449	n:3580000
KS ci ratio: 1.491094e-01	ci left: 1.786240e-04	ci right 2.076694e-04	k: 690	n:3580000
ATAD2   3580000 perm   6629 sec   (540 perm/sec)   p_kst 1.927374e-04   p_cons 1.663265e-01   p_joint 3.385475e-04

Joint ci ratio: 1.123023e-01	ci left: 3.202196e-04	ci right 3.585883e-04	k: 1217	n:3590000
Cons ci ratio: 4.631882e-03	ci left: 1.659403e-01	ci right 1.667109e-01	k: 597108	n:3590000
KS ci ratio: 1.486797e-01	ci left: 1.791992e-04	ci right 2.082466e-04	k: 694	n:3590000
ATAD2   3590000 perm   6664 sec   (539 perm/sec)   p_kst 1.933148e-04   p_cons 1.663253e-01   p_joint 3.389972e-04

Joint ci ratio: 1.121643e-01	ci left: 3.201400e-04	ci right 3.584489e-04	k: 1220	n:3600000
Cons ci ratio: 4.624959e-03	ci left: 1.659699e-01	ci right 1.667395e-01	k: 598876	n:3600000
KS ci ratio: 1.485728e-01	ci left: 1.789688e-04	ci right 2.079562e-04	k: 695	n:3600000
ATAD2   3600000 perm   6698 sec   (537 perm/sec)   p_kst 1.930556e-04   p_cons 1.663544e-01   p_joint 3.388889e-04

Joint ci ratio: 1.119353e-01	ci left: 3.205994e-04	ci right 3.588798e-04	k: 1225	n:3610000
Cons ci ratio: 4.618334e-03	ci left: 1.659833e-01	ci right 1.667519e-01	k: 600586	n:3610000
KS ci ratio: 1.482536e-01	ci left: 1.792732e-04	ci right 2.082420e-04	k: 698	n:3610000
ATAD2   3610000 perm   6732 sec   (536 perm/sec)   p_kst 1.933518e-04   p_cons 1.663673e-01   p_joint 3.393352e-04

Joint ci ratio: 1.118441e-01	ci left: 3.202508e-04	ci right 3.584564e-04	k: 1227	n:3620000
Cons ci ratio: 4.611720e-03	ci left: 1.659977e-01	ci right 1.667653e-01	k: 602300	n:3620000
KS ci ratio: 1.481477e-01	ci left: 1.790440e-04	ci right 2.079532e-04	k: 699	n:3620000
ATAD2   3620000 perm   6767 sec   (535 perm/sec)   p_kst 1.930939e-04   p_cons 1.663812e-01   p_joint 3.389503e-04

Joint ci ratio: 1.116624e-01	ci left: 3.204397e-04	ci right 3.586016e-04	k: 1231	n:3630000
Cons ci ratio: 4.605422e-03	ci left: 1.659947e-01	ci right 1.667612e-01	k: 603951	n:3630000
KS ci ratio: 1.479365e-01	ci left: 1.790813e-04	ci right 2.079517e-04	k: 701	n:3630000
ATAD2   3630000 perm   6801 sec   (534 perm/sec)   p_kst 1.931129e-04   p_cons 1.663777e-01   p_joint 3.391185e-04

Joint ci ratio: 1.115267e-01	ci left: 3.203606e-04	ci right 3.584636e-04	k: 1234	n:3640000
Cons ci ratio: 4.598822e-03	ci left: 1.660115e-01	ci right 1.667770e-01	k: 605674	n:3640000
KS ci ratio: 1.476214e-01	ci left: 1.793831e-04	ci right 2.082351e-04	k: 704	n:3640000
ATAD2   3640000 perm   6837 sec   (532 perm/sec)   p_kst 1.934066e-04   p_cons 1.663940e-01   p_joint 3.390110e-04

Joint ci ratio: 1.113016e-01	ci left: 3.208146e-04	ci right 3.588896e-04	k: 1239	n:3650000
Cons ci ratio: 4.592449e-03	ci left: 1.660161e-01	ci right 1.667806e-01	k: 607353	n:3650000
KS ci ratio: 1.475169e-01	ci left: 1.791554e-04	ci right 2.079486e-04	k: 705	n:3650000
ATAD2   3650000 perm   6871 sec   (531 perm/sec)   p_kst 1.931507e-04   p_cons 1.663981e-01   p_joint 3.394521e-04

Joint ci ratio: 1.112120e-01	ci left: 3.204692e-04	ci right 3.584707e-04	k: 1241	n:3660000
Cons ci ratio: 4.586207e-03	ci left: 1.660145e-01	ci right 1.667779e-01	k: 609009	n:3660000
KS ci ratio: 1.474125e-01	ci left: 1.789291e-04	ci right 2.076638e-04	k: 706	n:3660000
ATAD2   3660000 perm   6905 sec   (530 perm/sec)   p_kst 1.928962e-04   p_cons 1.663959e-01   p_joint 3.390710e-04

Joint ci ratio: 1.111673e-01	ci left: 3.198609e-04	ci right 3.577740e-04	k: 1242	n:3670000
Cons ci ratio: 4.580053e-03	ci left: 1.660090e-01	ci right 1.667713e-01	k: 610651	n:3670000
KS ci ratio: 1.474126e-01	ci left: 1.784415e-04	ci right 2.070979e-04	k: 706	n:3670000
ATAD2   3670000 perm   6940 sec   (529 perm/sec)   p_kst 1.923706e-04   p_cons 1.663899e-01   p_joint 3.384196e-04

Joint ci ratio: 1.109443e-01	ci left: 3.203127e-04	ci right 3.581982e-04	k: 1247	n:3680000
Cons ci ratio: 4.573651e-03	ci left: 1.660201e-01	ci right 1.667815e-01	k: 612354	n:3680000
KS ci ratio: 1.471008e-01	ci left: 1.787418e-04	ci right 2.073804e-04	k: 709	n:3680000
ATAD2   3680000 perm   6975 sec   (528 perm/sec)   p_kst 1.926630e-04   p_cons 1.664005e-01   p_joint 3.388587e-04

Joint ci ratio: 1.108112e-01	ci left: 3.202351e-04	ci right 3.580630e-04	k: 1250	n:3690000
Cons ci ratio: 4.567409e-03	ci left: 1.660231e-01	ci right 1.667834e-01	k: 614027	n:3690000
KS ci ratio: 1.469973e-01	ci left: 1.785185e-04	ci right 2.070994e-04	k: 710	n:3690000
ATAD2   3690000 perm   7011 sec   (526 perm/sec)   p_kst 1.924119e-04   p_cons 1.664030e-01   p_joint 3.387534e-04

Joint ci ratio: 1.106786e-01	ci left: 3.201580e-04	ci right 3.579285e-04	k: 1253	n:3700000
Cons ci ratio: 4.561109e-03	ci left: 1.660312e-01	ci right 1.667904e-01	k: 615719	n:3700000
KS ci ratio: 1.467910e-01	ci left: 1.785567e-04	ci right 2.071000e-04	k: 712	n:3700000
ATAD2   3700000 perm   7046 sec   (525 perm/sec)   p_kst 1.924324e-04   p_cons 1.664105e-01   p_joint 3.386486e-04

Joint ci ratio: 1.105905e-01	ci left: 3.198192e-04	ci right 3.575177e-04	k: 1255	n:3710000
Cons ci ratio: 4.554883e-03	ci left: 1.660362e-01	ci right 1.667945e-01	k: 617400	n:3710000
KS ci ratio: 1.466882e-01	ci left: 1.783350e-04	ci right 2.068212e-04	k: 713	n:3710000
ATAD2   3710000 perm   7082 sec   (524 perm/sec)   p_kst 1.921833e-04   p_cons 1.664151e-01   p_joint 3.382749e-04

Joint ci ratio: 1.105465e-01	ci left: 3.192208e-04	ci right 3.568329e-04	k: 1256	n:3720000
Cons ci ratio: 4.548704e-03	ci left: 1.660399e-01	ci right 1.667972e-01	k: 619076	n:3720000
KS ci ratio: 1.466882e-01	ci left: 1.778556e-04	ci right 2.062653e-04	k: 713	n:3720000
ATAD2   3720000 perm   7117 sec   (523 perm/sec)   p_kst 1.916667e-04   p_cons 1.664183e-01   p_joint 3.376344e-04

Joint ci ratio: 1.105465e-01	ci left: 3.183650e-04	ci right 3.558763e-04	k: 1256	n:3730000
Cons ci ratio: 4.542542e-03	ci left: 1.660441e-01	ci right 1.668004e-01	k: 620754	n:3730000
KS ci ratio: 1.466883e-01	ci left: 1.773788e-04	ci right 2.057123e-04	k: 713	n:3730000
ATAD2   3730000 perm   7153 sec   (521 perm/sec)   p_kst 1.911528e-04   p_cons 1.664220e-01   p_joint 3.367292e-04

Joint ci ratio: 1.104587e-01	ci left: 3.180337e-04	ci right 3.554743e-04	k: 1258	n:3740000
Cons ci ratio: 4.536479e-03	ci left: 1.660438e-01	ci right 1.667990e-01	k: 622415	n:3740000
KS ci ratio: 1.465857e-01	ci left: 1.771621e-04	ci right 2.054394e-04	k: 714	n:3740000
ATAD2   3740000 perm   7189 sec   (520 perm/sec)   p_kst 1.909091e-04   p_cons 1.664211e-01   p_joint 3.363636e-04

Joint ci ratio: 1.104149e-01	ci left: 3.174449e-04	ci right 3.548004e-04	k: 1259	n:3750000
Cons ci ratio: 4.530127e-03	ci left: 1.660626e-01	ci right 1.668168e-01	k: 624148	n:3750000
KS ci ratio: 1.464833e-01	ci left: 1.769465e-04	ci right 2.051680e-04	k: 715	n:3750000
ATAD2   3750000 perm   7225 sec   (519 perm/sec)   p_kst 1.906667e-04   p_cons 1.664395e-01   p_joint 3.357333e-04

Joint ci ratio: 1.101094e-01	ci left: 3.184110e-04	ci right 3.557698e-04	k: 1266	n:3760000
Cons ci ratio: 4.523906e-03	ci left: 1.660750e-01	ci right 1.668282e-01	k: 625857	n:3760000
KS ci ratio: 1.460758e-01	ci left: 1.775008e-04	ci right 2.057251e-04	k: 719	n:3760000
ATAD2   3760000 perm   7261 sec   (518 perm/sec)   p_kst 1.912234e-04   p_cons 1.664513e-01   p_joint 3.367021e-04

Joint ci ratio: 1.098928e-01	ci left: 3.188562e-04	ci right 3.561888e-04	k: 1271	n:3770000
Cons ci ratio: 4.517766e-03	ci left: 1.660838e-01	ci right 1.668361e-01	k: 627553	n:3770000
KS ci ratio: 1.456716e-01	ci left: 1.780523e-04	ci right 2.062791e-04	k: 723	n:3770000
ATAD2   3770000 perm   7297 sec   (517 perm/sec)   p_kst 1.917772e-04   p_cons 1.664597e-01   p_joint 3.371353e-04

Joint ci ratio: 1.098928e-01	ci left: 3.180127e-04	ci right 3.552465e-04	k: 1271	n:3780000
Cons ci ratio: 4.511707e-03	ci left: 1.660892e-01	ci right 1.668405e-01	k: 629236	n:3780000
KS ci ratio: 1.456717e-01	ci left: 1.775813e-04	ci right 2.057334e-04	k: 723	n:3780000
ATAD2   3780000 perm   7334 sec   (515 perm/sec)   p_kst 1.912698e-04   p_cons 1.664646e-01   p_joint 3.362434e-04

Joint ci ratio: 1.098066e-01	ci left: 3.176868e-04	ci right 3.548514e-04	k: 1273	n:3790000
Cons ci ratio: 4.505818e-03	ci left: 1.660855e-01	ci right 1.668358e-01	k: 630885	n:3790000
KS ci ratio: 1.454709e-01	ci left: 1.776212e-04	ci right 2.057375e-04	k: 725	n:3790000
ATAD2   3790000 perm   7369 sec   (514 perm/sec)   p_kst 1.912929e-04   p_cons 1.664604e-01   p_joint 3.358839e-04

Joint ci ratio: 1.095917e-01	ci left: 3.181305e-04	ci right 3.552694e-04	k: 1278	n:3800000
Cons ci ratio: 4.499674e-03	ci left: 1.660990e-01	ci right 1.668483e-01	k: 632599	n:3800000
KS ci ratio: 1.451712e-01	ci left: 1.779145e-04	ci right 2.060142e-04	k: 728	n:3800000
ATAD2   3800000 perm   7406 sec   (513 perm/sec)   p_kst 1.915789e-04   p_cons 1.664734e-01   p_joint 3.363158e-04

Joint ci ratio: 1.092930e-01	ci left: 3.190825e-04	ci right 3.562245e-04	k: 1285	n:3810000
Cons ci ratio: 4.493934e-03	ci left: 1.660891e-01	ci right 1.668374e-01	k: 634224	n:3810000
KS ci ratio: 1.444791e-01	ci left: 1.792183e-04	ci right 2.073773e-04	k: 735	n:3810000
ATAD2   3810000 perm   7442 sec   (512 perm/sec)   p_kst 1.929134e-04   p_cons 1.664630e-01   p_joint 3.372703e-04

Joint ci ratio: 1.091234e-01	ci left: 3.192657e-04	ci right 3.563677e-04	k: 1289	n:3820000
Cons ci ratio: 4.488106e-03	ci left: 1.660860e-01	ci right 1.668333e-01	k: 635875	n:3820000
KS ci ratio: 1.440881e-01	ci left: 1.797584e-04	ci right 2.079193e-04	k: 739	n:3820000
ATAD2   3820000 perm   7480 sec   (511 perm/sec)   p_kst 1.934555e-04   p_cons 1.664594e-01   p_joint 3.374346e-04

Joint ci ratio: 1.089546e-01	ci left: 3.194480e-04	ci right 3.565101e-04	k: 1293	n:3830000
Cons ci ratio: 4.482014e-03	ci left: 1.661007e-01	ci right 1.668471e-01	k: 637594	n:3830000
KS ci ratio: 1.437002e-01	ci left: 1.802959e-04	ci right 2.084584e-04	k: 743	n:3830000
ATAD2   3830000 perm   7517 sec   (510 perm/sec)   p_kst 1.939948e-04   p_cons 1.664736e-01   p_joint 3.375979e-04

Joint ci ratio: 1.087866e-01	ci left: 3.196294e-04	ci right 3.566517e-04	k: 1297	n:3840000
Cons ci ratio: 4.476328e-03	ci left: 1.660916e-01	ci right 1.668370e-01	k: 639222	n:3840000
KS ci ratio: 1.434113e-01	ci left: 1.805796e-04	ci right 2.087248e-04	k: 746	n:3840000
ATAD2   3840000 perm   7554 sec   (508 perm/sec)   p_kst 1.942708e-04   p_cons 1.664641e-01   p_joint 3.377604e-04

Joint ci ratio: 1.087866e-01	ci left: 3.187992e-04	ci right 3.557253e-04	k: 1297	n:3850000
Cons ci ratio: 4.470330e-03	ci left: 1.661034e-01	ci right 1.668478e-01	k: 640930	n:3850000
KS ci ratio: 1.434114e-01	ci left: 1.801105e-04	ci right 2.081827e-04	k: 746	n:3850000
ATAD2   3850000 perm   7591 sec   (507 perm/sec)   p_kst 1.937662e-04   p_cons 1.664753e-01   p_joint 3.368831e-04

Joint ci ratio: 1.086611e-01	ci left: 3.187294e-04	ci right 3.556021e-04	k: 1300	n:3860000
Cons ci ratio: 4.464514e-03	ci left: 1.661052e-01	ci right 1.668487e-01	k: 642600	n:3860000
KS ci ratio: 1.433155e-01	ci left: 1.798937e-04	ci right 2.079117e-04	k: 747	n:3860000
ATAD2   3860000 perm   7628 sec   (506 perm/sec)   p_kst 1.935233e-04   p_cons 1.664767e-01   p_joint 3.367876e-04

Joint ci ratio: 1.086194e-01	ci left: 3.181571e-04	ci right 3.549487e-04	k: 1301	n:3870000
Cons ci ratio: 4.458512e-03	ci left: 1.661199e-01	ci right 1.668625e-01	k: 644320	n:3870000
KS ci ratio: 1.433155e-01	ci left: 1.794288e-04	ci right 2.073745e-04	k: 747	n:3870000
ATAD2   3870000 perm   7665 sec   (505 perm/sec)   p_kst 1.930233e-04   p_cons 1.664910e-01   p_joint 3.361757e-04

Joint ci ratio: 1.083285e-01	ci left: 3.190923e-04	ci right 3.558869e-04	k: 1308	n:3880000
Cons ci ratio: 4.452821e-03	ci left: 1.661168e-01	ci right 1.668584e-01	k: 645971	n:3880000
KS ci ratio: 1.428389e-01	ci left: 1.802089e-04	ci right 2.081748e-04	k: 752	n:3880000
ATAD2   3880000 perm   7703 sec   (504 perm/sec)   p_kst 1.938144e-04   p_cons 1.664874e-01   p_joint 3.371134e-04

Joint ci ratio: 1.081634e-01	ci left: 3.192725e-04	ci right 3.560281e-04	k: 1312	n:3890000
Cons ci ratio: 4.447143e-03	ci left: 1.661143e-01	ci right 1.668549e-01	k: 647624	n:3890000
KS ci ratio: 1.427441e-01	ci left: 1.799936e-04	ci right 2.079059e-04	k: 753	n:3890000
ATAD2   3890000 perm   7740 sec   (503 perm/sec)   p_kst 1.935733e-04   p_cons 1.664843e-01   p_joint 3.372751e-04

Joint ci ratio: 1.142923e-01	ci left: 2.843018e-04	ci right 3.190112e-04	k: 1175	n:3900000
Cons ci ratio: 4.441617e-03	ci left: 1.661035e-01	ci right 1.668432e-01	k: 649245	n:3900000
KS ci ratio: 1.425552e-01	ci left: 1.800265e-04	ci right 2.079039e-04	k: 755	n:3900000
ATAD2   3900000 perm   7776 sec   (502 perm/sec)   p_kst 1.935897e-04   p_cons 1.664731e-01   p_joint 3.012821e-04

Joint ci ratio: 1.140984e-01	ci left: 2.845685e-04	ci right 3.192476e-04	k: 1179	n:3910000
Cons ci ratio: 4.436010e-03	ci left: 1.660992e-01	ci right 1.668379e-01	k: 650891	n:3910000
KS ci ratio: 1.422732e-01	ci left: 1.803061e-04	ci right 2.081667e-04	k: 758	n:3910000
ATAD2   3910000 perm   7814 sec   (500 perm/sec)   p_kst 1.938619e-04   p_cons 1.664683e-01   p_joint 3.015345e-04

Joint ci ratio: 1.140984e-01	ci left: 2.838426e-04	ci right 3.184332e-04	k: 1179	n:3920000
Cons ci ratio: 4.430258e-03	ci left: 1.661053e-01	ci right 1.668431e-01	k: 652578	n:3920000
KS ci ratio: 1.421795e-01	ci left: 1.800921e-04	ci right 2.078999e-04	k: 759	n:3920000
ATAD2   3920000 perm   7852 sec   (499 perm/sec)   p_kst 1.936224e-04   p_cons 1.664740e-01   p_joint 3.007653e-04

Joint ci ratio: 1.140501e-01	ci left: 2.833675e-04	ci right 3.178846e-04	k: 1180	n:3930000
Cons ci ratio: 4.424548e-03	ci left: 1.661102e-01	ci right 1.668470e-01	k: 654260	n:3930000
KS ci ratio: 1.420861e-01	ci left: 1.798793e-04	ci right 2.076344e-04	k: 760	n:3930000
ATAD2   3930000 perm   7889 sec   (498 perm/sec)   p_kst 1.933842e-04   p_cons 1.664784e-01   p_joint 3.002545e-04

Joint ci ratio: 1.140019e-01	ci left: 2.828949e-04	ci right 3.173389e-04	k: 1181	n:3940000
Cons ci ratio: 4.418860e-03	ci left: 1.661150e-01	ci right 1.668509e-01	k: 655942	n:3940000
KS ci ratio: 1.418998e-01	ci left: 1.799123e-04	ci right 2.076330e-04	k: 762	n:3940000
ATAD2   3940000 perm   7926 sec   (497 perm/sec)   p_kst 1.934010e-04   p_cons 1.664827e-01   p_joint 2.997462e-04

Joint ci ratio: 1.138575e-01	ci left: 2.829165e-04	ci right 3.173166e-04	k: 1184	n:3950000
Cons ci ratio: 4.413383e-03	ci left: 1.661080e-01	ci right 1.668429e-01	k: 657577	n:3950000
KS ci ratio: 1.416216e-01	ci left: 1.801894e-04	ci right 2.078938e-04	k: 765	n:3950000
ATAD2   3950000 perm   7964 sec   (496 perm/sec)   p_kst 1.936709e-04   p_cons 1.664752e-01   p_joint 2.997468e-04

Joint ci ratio: 1.136658e-01	ci left: 2.831835e-04	ci right 3.175541e-04	k: 1188	n:3960000
Cons ci ratio: 4.407778e-03	ci left: 1.661102e-01	ci right 1.668443e-01	k: 659249	n:3960000
KS ci ratio: 1.414371e-01	ci left: 1.802215e-04	ci right 2.078917e-04	k: 767	n:3960000
ATAD2   3960000 perm   8003 sec   (495 perm/sec)   p_kst 1.936869e-04   p_cons 1.664770e-01   p_joint 3.000000e-04

Joint ci ratio: 1.135227e-01	ci left: 2.832044e-04	ci right 3.175314e-04	k: 1191	n:3970000
Cons ci ratio: 4.402338e-03	ci left: 1.661035e-01	ci right 1.668366e-01	k: 660885	n:3970000
KS ci ratio: 1.410702e-01	ci left: 1.807395e-04	ci right 2.084112e-04	k: 771	n:3970000
ATAD2   3970000 perm   8041 sec   (494 perm/sec)   p_kst 1.942065e-04   p_cons 1.664698e-01   p_joint 3.000000e-04

Joint ci ratio: 1.134276e-01	ci left: 2.829810e-04	ci right 3.172503e-04	k: 1193	n:3980000
Cons ci ratio: 4.396826e-03	ci left: 1.661025e-01	ci right 1.668347e-01	k: 662544	n:3980000
KS ci ratio: 1.409789e-01	ci left: 1.805278e-04	ci right 2.081476e-04	k: 772	n:3980000
ATAD2   3980000 perm   8080 sec   (493 perm/sec)   p_kst 1.939698e-04   p_cons 1.664683e-01   p_joint 2.997487e-04

Joint ci ratio: 1.133327e-01	ci left: 2.827589e-04	ci right 3.169707e-04	k: 1195	n:3990000
Cons ci ratio: 4.391245e-03	ci left: 1.661073e-01	ci right 1.668386e-01	k: 664226	n:3990000
KS ci ratio: 1.408878e-01	ci left: 1.803171e-04	ci right 2.078854e-04	k: 773	n:3990000
ATAD2   3990000 perm   8119 sec   (491 perm/sec)   p_kst 1.937343e-04   p_cons 1.664727e-01   p_joint 2.994987e-04

Joint ci ratio: 1.130025e-01	ci left: 2.837524e-04	ci right 3.179777e-04	k: 1202	n:4000000
Cons ci ratio: 4.385810e-03	ci left: 1.661041e-01	ci right 1.668344e-01	k: 665876	n:4000000
KS ci ratio: 1.405251e-01	ci left: 1.808311e-04	ci right 2.084009e-04	k: 777	n:4000000
ATAD2   4000000 perm   8157 sec   (490 perm/sec)   p_kst 1.942500e-04   p_cons 1.664690e-01   p_joint 3.005000e-04

Joint ci ratio: 1.127217e-01	ci left: 2.844988e-04	ci right 3.187233e-04	k: 1208	n:4010000
Cons ci ratio: 4.380408e-03	ci left: 1.661001e-01	ci right 1.668295e-01	k: 667523	n:4010000
KS ci ratio: 1.401652e-01	ci left: 1.813427e-04	ci right 2.089137e-04	k: 781	n:4010000
ATAD2   4010000 perm   8196 sec   (489 perm/sec)   p_kst 1.947631e-04   p_cons 1.664646e-01   p_joint 3.012469e-04

Joint ci ratio: 1.126751e-01	ci left: 2.840329e-04	ci right 3.181862e-04	k: 1209	n:4020000
Cons ci ratio: 4.374994e-03	ci left: 1.660982e-01	ci right 1.668267e-01	k: 669178	n:4020000
KS ci ratio: 1.401653e-01	ci left: 1.808916e-04	ci right 2.083940e-04	k: 781	n:4020000
ATAD2   4020000 perm   8235 sec   (488 perm/sec)   p_kst 1.942786e-04   p_cons 1.664622e-01   p_joint 3.007463e-04

Joint ci ratio: 1.125821e-01	ci left: 2.838104e-04	ci right 3.179069e-04	k: 1211	n:4030000
Cons ci ratio: 4.369475e-03	ci left: 1.661042e-01	ci right 1.668318e-01	k: 670865	n:4030000
KS ci ratio: 1.400757e-01	ci left: 1.806821e-04	ci right 2.081337e-04	k: 782	n:4030000
ATAD2   4030000 perm   8274 sec   (487 perm/sec)   p_kst 1.940447e-04   p_cons 1.664677e-01   p_joint 3.004963e-04

Joint ci ratio: 1.124894e-01	ci left: 2.835890e-04	ci right 3.176290e-04	k: 1213	n:4040000
Cons ci ratio: 4.363962e-03	ci left: 1.661111e-01	ci right 1.668379e-01	k: 672556	n:4040000
KS ci ratio: 1.399864e-01	ci left: 1.804738e-04	ci right 2.078748e-04	k: 783	n:4040000
ATAD2   4040000 perm   8313 sec   (486 perm/sec)   p_kst 1.938119e-04   p_cons 1.664743e-01   p_joint 3.002475e-04

Joint ci ratio: 1.124894e-01	ci left: 2.828888e-04	ci right 3.168447e-04	k: 1213	n:4050000
Cons ci ratio: 4.358469e-03	ci left: 1.661181e-01	ci right 1.668439e-01	k: 674247	n:4050000
KS ci ratio: 1.399864e-01	ci left: 1.800281e-04	ci right 2.073615e-04	k: 783	n:4050000
ATAD2   4050000 perm   8351 sec   (485 perm/sec)   p_kst 1.933333e-04   p_cons 1.664807e-01   p_joint 2.995062e-04

Joint ci ratio: 1.121664e-01	ci left: 2.838677e-04	ci right 3.178369e-04	k: 1220	n:4060000
Cons ci ratio: 4.353101e-03	ci left: 1.661183e-01	ci right 1.668432e-01	k: 675911	n:4060000
KS ci ratio: 1.396306e-01	ci left: 1.805355e-04	ci right 2.078704e-04	k: 787	n:4060000
ATAD2   4060000 perm   8391 sec   (484 perm/sec)   p_kst 1.938424e-04   p_cons 1.664805e-01   p_joint 3.004926e-04

Joint ci ratio: 1.120747e-01	ci left: 2.836479e-04	ci right 3.175611e-04	k: 1222	n:4070000
Cons ci ratio: 4.347688e-03	ci left: 1.661227e-01	ci right 1.668468e-01	k: 677592	n:4070000
KS ci ratio: 1.394538e-01	ci left: 1.805662e-04	ci right 2.078682e-04	k: 789	n:4070000
ATAD2   4070000 perm   8429 sec   (483 perm/sec)   p_kst 1.938575e-04   p_cons 1.664845e-01   p_joint 3.002457e-04

Joint ci ratio: 1.126288e-01	ci left: 2.800941e-04	ci right 3.137590e-04	k: 1210	n:4080000
Cons ci ratio: 4.342268e-03	ci left: 1.661288e-01	ci right 1.668520e-01	k: 679280	n:4080000
KS ci ratio: 1.393656e-01	ci left: 1.803601e-04	ci right 2.076124e-04	k: 790	n:4080000
ATAD2   4080000 perm   8468 sec   (482 perm/sec)   p_kst 1.936275e-04   p_cons 1.664902e-01   p_joint 2.965686e-04

Joint ci ratio: 1.124896e-01	ci left: 2.801221e-04	ci right 3.137460e-04	k: 1213	n:4090000
Cons ci ratio: 4.336788e-03	ci left: 1.661401e-01	ci right 1.668624e-01	k: 680989	n:4090000
KS ci ratio: 1.391021e-01	ci left: 1.806271e-04	ci right 2.078638e-04	k: 793	n:4090000
ATAD2   4090000 perm   8507 sec   (481 perm/sec)   p_kst 1.938875e-04   p_cons 1.665010e-01   p_joint 2.965770e-04

Joint ci ratio: 1.123047e-01	ci left: 2.803871e-04	ci right 3.139838e-04	k: 1217	n:4100000
Cons ci ratio: 4.331469e-03	ci left: 1.661422e-01	ci right 1.668636e-01	k: 682661	n:4100000
KS ci ratio: 1.387530e-01	ci left: 1.811283e-04	ci right 2.083663e-04	k: 797	n:4100000
ATAD2   4100000 perm   8546 sec   (480 perm/sec)   p_kst 1.943902e-04   p_cons 1.665027e-01   p_joint 2.968293e-04

Joint ci ratio: 1.122586e-01	ci left: 2.799413e-04	ci right 3.134700e-04	k: 1218	n:4110000
Cons ci ratio: 4.326045e-03	ci left: 1.661524e-01	ci right 1.668729e-01	k: 684366	n:4110000
KS ci ratio: 1.385794e-01	ci left: 1.811573e-04	ci right 2.083628e-04	k: 799	n:4110000
ATAD2   4110000 perm   8584 sec   (479 perm/sec)   p_kst 1.944039e-04   p_cons 1.665124e-01   p_joint 2.963504e-04

Joint ci ratio: 1.121208e-01	ci left: 2.799696e-04	ci right 3.134577e-04	k: 1221	n:4120000
Cons ci ratio: 4.320958e-03	ci left: 1.661421e-01	ci right 1.668618e-01	k: 685987	n:4120000
KS ci ratio: 1.384065e-01	ci left: 1.811862e-04	ci right 2.083593e-04	k: 801	n:4120000
ATAD2   4120000 perm   8622 sec   (478 perm/sec)   p_kst 1.944175e-04   p_cons 1.665017e-01   p_joint 2.963592e-04

Joint ci ratio: 1.118920e-01	ci left: 2.804684e-04	ci right 3.139433e-04	k: 1226	n:4130000
Cons ci ratio: 4.315818e-03	ci left: 1.661365e-01	ci right 1.668553e-01	k: 687627	n:4130000
KS ci ratio: 1.383203e-01	ci left: 1.809813e-04	ci right 2.081053e-04	k: 802	n:4130000
ATAD2   4130000 perm   8661 sec   (477 perm/sec)   p_kst 1.941889e-04   p_cons 1.664956e-01   p_joint 2.968523e-04

Joint ci ratio: 1.117555e-01	ci left: 2.804953e-04	ci right 3.139299e-04	k: 1229	n:4140000
Cons ci ratio: 4.310400e-03	ci left: 1.661500e-01	ci right 1.668679e-01	k: 689346	n:4140000
KS ci ratio: 1.381484e-01	ci left: 1.810105e-04	ci right 2.081024e-04	k: 804	n:4140000
ATAD2   4140000 perm   8700 sec   (476 perm/sec)   p_kst 1.942029e-04   p_cons 1.665087e-01   p_joint 2.968599e-04

Joint ci ratio: 1.116648e-01	ci left: 2.802879e-04	ci right 3.136688e-04	k: 1231	n:4150000
Cons ci ratio: 4.305346e-03	ci left: 1.661412e-01	ci right 1.668583e-01	k: 690973	n:4150000
KS ci ratio: 1.379771e-01	ci left: 1.810396e-04	ci right 2.080996e-04	k: 806	n:4150000
ATAD2   4150000 perm   8738 sec   (475 perm/sec)   p_kst 1.942169e-04   p_cons 1.664995e-01   p_joint 2.966265e-04

Joint ci ratio: 1.116195e-01	ci left: 2.798478e-04	ci right 3.131619e-04	k: 1232	n:4160000
Cons ci ratio: 4.300351e-03	ci left: 1.661299e-01	ci right 1.668461e-01	k: 692589	n:4160000
KS ci ratio: 1.378917e-01	ci left: 1.808365e-04	ci right 2.078480e-04	k: 807	n:4160000
ATAD2   4160000 perm   8777 sec   (474 perm/sec)   p_kst 1.939904e-04   p_cons 1.664877e-01   p_joint 2.961538e-04

Joint ci ratio: 1.115291e-01	ci left: 2.796429e-04	ci right 3.129039e-04	k: 1234	n:4170000
Cons ci ratio: 4.295068e-03	ci left: 1.661382e-01	ci right 1.668536e-01	k: 694287	n:4170000
KS ci ratio: 1.377214e-01	ci left: 1.808659e-04	ci right 2.078457e-04	k: 809	n:4170000
ATAD2   4170000 perm   8816 sec   (473 perm/sec)   p_kst 1.940048e-04   p_cons 1.664957e-01   p_joint 2.959233e-04

Joint ci ratio: 1.113939e-01	ci left: 2.796716e-04	ci right 3.128930e-04	k: 1237	n:4180000
Cons ci ratio: 4.290024e-03	ci left: 1.661325e-01	ci right 1.668469e-01	k: 695926	n:4180000
KS ci ratio: 1.376364e-01	ci left: 1.806642e-04	ci right 2.075959e-04	k: 810	n:4180000
ATAD2   4180000 perm   8855 sec   (472 perm/sec)   p_kst 1.937799e-04   p_cons 1.664895e-01   p_joint 2.959330e-04

Joint ci ratio: 1.113040e-01	ci left: 2.794682e-04	ci right 3.126369e-04	k: 1239	n:4190000
Cons ci ratio: 4.284860e-03	ci left: 1.661355e-01	ci right 1.668492e-01	k: 697602	n:4190000
KS ci ratio: 1.375517e-01	ci left: 1.804635e-04	ci right 2.073474e-04	k: 811	n:4190000
ATAD2   4190000 perm   8894 sec   (471 perm/sec)   p_kst 1.935561e-04   p_cons 1.664921e-01   p_joint 2.957041e-04

Joint ci ratio: 1.112144e-01	ci left: 2.792657e-04	ci right 3.123820e-04	k: 1241	n:4200000
Cons ci ratio: 4.279789e-03	ci left: 1.661338e-01	ci right 1.668466e-01	k: 699258	n:4200000
KS ci ratio: 1.375517e-01	ci left: 1.800338e-04	ci right 2.068537e-04	k: 811	n:4200000
ATAD2   4200000 perm   8934 sec   (470 perm/sec)   p_kst 1.930952e-04   p_cons 1.664900e-01   p_joint 2.954762e-04

Joint ci ratio: 1.109912e-01	ci left: 2.797570e-04	ci right 3.128606e-04	k: 1246	n:4210000
Cons ci ratio: 4.274834e-03	ci left: 1.661257e-01	ci right 1.668377e-01	k: 700887	n:4210000
KS ci ratio: 1.372983e-01	ci left: 1.802943e-04	ci right 2.070994e-04	k: 814	n:4210000
ATAD2   4210000 perm   8974 sec   (469 perm/sec)   p_kst 1.933492e-04   p_cons 1.664815e-01   p_joint 2.959620e-04

Joint ci ratio: 1.108579e-01	ci left: 2.797853e-04	ci right 3.128498e-04	k: 1249	n:4220000
Cons ci ratio: 4.269711e-03	ci left: 1.661298e-01	ci right 1.668408e-01	k: 702567	n:4220000
KS ci ratio: 1.371301e-01	ci left: 1.803247e-04	ci right 2.070988e-04	k: 816	n:4220000
ATAD2   4220000 perm   9013 sec   (468 perm/sec)   p_kst 1.933649e-04   p_cons 1.664851e-01   p_joint 2.959716e-04

Joint ci ratio: 1.271673e-01	ci left: 2.103027e-04	ci right 2.390885e-04	k: 949	n:4230000
Cons ci ratio: 4.264570e-03	ci left: 1.661361e-01	ci right 1.668464e-01	k: 704257	n:4230000
KS ci ratio: 1.393661e-01	ci left: 1.739644e-04	ci right 2.002503e-04	k: 790	n:4230000
ATAD2   4230000 perm   9054 sec   (467 perm/sec)   p_kst 1.867612e-04   p_cons 1.664910e-01   p_joint 2.243499e-04

Joint ci ratio: 1.271004e-01	ci left: 2.100351e-04	ci right 2.387679e-04	k: 950	n:4240000
Cons ci ratio: 4.259469e-03	ci left: 1.661410e-01	ci right 1.668504e-01	k: 705941	n:4240000
KS ci ratio: 1.392781e-01	ci left: 1.737817e-04	ci right 2.000221e-04	k: 791	n:4240000
ATAD2   4240000 perm   9094 sec   (466 perm/sec)   p_kst 1.865566e-04   p_cons 1.664955e-01   p_joint 2.240566e-04

Joint ci ratio: 1.271005e-01	ci left: 2.095409e-04	ci right 2.382061e-04	k: 950	n:4250000
Cons ci ratio: 4.254602e-03	ci left: 1.661318e-01	ci right 1.668404e-01	k: 707565	n:4250000
KS ci ratio: 1.392781e-01	ci left: 1.733728e-04	ci right 1.995514e-04	k: 791	n:4250000
ATAD2   4250000 perm   9134 sec   (465 perm/sec)   p_kst 1.861176e-04   p_cons 1.664859e-01   p_joint 2.235294e-04

Joint ci ratio: 1.269670e-01	ci left: 2.095035e-04	ci right 2.381313e-04	k: 952	n:4260000
Cons ci ratio: 4.249454e-03	ci left: 1.661421e-01	ci right 1.668499e-01	k: 709272	n:4260000
KS ci ratio: 1.390151e-01	ci left: 1.736455e-04	ci right 1.998117e-04	k: 794	n:4260000
ATAD2   4260000 perm   9174 sec   (464 perm/sec)   p_kst 1.863850e-04   p_cons 1.664958e-01   p_joint 2.234742e-04

Joint ci ratio: 1.267677e-01	ci left: 2.096932e-04	ci right 2.382985e-04	k: 955	n:4270000
Cons ci ratio: 4.244536e-03	ci left: 1.661386e-01	ci right 1.668455e-01	k: 710920	n:4270000
KS ci ratio: 1.388405e-01	ci left: 1.736910e-04	ci right 1.998284e-04	k: 796	n:4270000
ATAD2   4270000 perm   9215 sec   (463 perm/sec)   p_kst 1.864169e-04   p_cons 1.664918e-01   p_joint 2.236534e-04

Joint ci ratio: 1.267677e-01	ci left: 2.092032e-04	ci right 2.377418e-04	k: 955	n:4280000
Cons ci ratio: 4.239592e-03	ci left: 1.661378e-01	ci right 1.668439e-01	k: 712580	n:4280000
KS ci ratio: 1.387535e-01	ci left: 1.735107e-04	ci right 1.996033e-04	k: 797	n:4280000
ATAD2   4280000 perm   9255 sec   (462 perm/sec)   p_kst 1.862150e-04   p_cons 1.664907e-01   p_joint 2.231308e-04

Joint ci ratio: 1.265692e-01	ci left: 2.093927e-04	ci right 2.379090e-04	k: 958	n:4290000
Cons ci ratio: 4.234538e-03	ci left: 1.661455e-01	ci right 1.668508e-01	k: 714276	n:4290000
KS ci ratio: 1.385800e-01	ci left: 1.735562e-04	ci right 1.996204e-04	k: 799	n:4290000
ATAD2   4290000 perm   9295 sec   (462 perm/sec)   p_kst 1.862471e-04   p_cons 1.664979e-01   p_joint 2.233100e-04

Joint ci ratio: 1.265033e-01	ci left: 2.091310e-04	ci right 2.375957e-04	k: 959	n:4300000
Cons ci ratio: 4.229880e-03	ci left: 1.661283e-01	ci right 1.668327e-01	k: 715865	n:4300000
KS ci ratio: 1.385800e-01	ci left: 1.731526e-04	ci right 1.991561e-04	k: 799	n:4300000
ATAD2   4300000 perm   9337 sec   (461 perm/sec)   p_kst 1.858140e-04   p_cons 1.664802e-01   p_joint 2.230233e-04

Joint ci ratio: 1.264375e-01	ci left: 2.088704e-04	ci right 2.372838e-04	k: 960	n:4310000
Cons ci ratio: 4.225051e-03	ci left: 1.661234e-01	ci right 1.668270e-01	k: 717507	n:4310000
KS ci ratio: 1.385800e-01	ci left: 1.727509e-04	ci right 1.986941e-04	k: 799	n:4310000
ATAD2   4310000 perm   9377 sec   (460 perm/sec)   p_kst 1.853828e-04   p_cons 1.664749e-01   p_joint 2.227378e-04

Joint ci ratio: 1.263061e-01	ci left: 2.088353e-04	ci right 2.372121e-04	k: 962	n:4320000
Cons ci ratio: 4.220139e-03	ci left: 1.661250e-01	ci right 1.668278e-01	k: 719177	n:4320000
KS ci ratio: 1.384071e-01	ci left: 1.727979e-04	ci right 1.987131e-04	k: 801	n:4320000
ATAD2   4320000 perm   9418 sec   (459 perm/sec)   p_kst 1.854167e-04   p_cons 1.664762e-01   p_joint 2.226852e-04

Joint ci ratio: 1.260446e-01	ci left: 2.092476e-04	ci right 2.376172e-04	k: 966	n:4330000
Cons ci ratio: 4.215220e-03	ci left: 1.661282e-01	ci right 1.668302e-01	k: 720854	n:4330000
KS ci ratio: 1.380632e-01	ci left: 1.732907e-04	ci right 1.992099e-04	k: 805	n:4330000
ATAD2   4330000 perm   9460 sec   (458 perm/sec)   p_kst 1.859122e-04   p_cons 1.664790e-01   p_joint 2.230947e-04

Joint ci ratio: 1.257847e-01	ci left: 2.096581e-04	ci right 2.380203e-04	k: 970	n:4340000
Cons ci ratio: 4.210522e-03	ci left: 1.661181e-01	ci right 1.668192e-01	k: 722473	n:4340000
KS ci ratio: 1.378923e-01	ci left: 1.733363e-04	ci right 1.992276e-04	k: 807	n:4340000
ATAD2   4340000 perm   9500 sec   (457 perm/sec)   p_kst 1.859447e-04   p_cons 1.664684e-01   p_joint 2.235023e-04

Joint ci ratio: 1.255264e-01	ci left: 2.100667e-04	ci right 2.384216e-04	k: 974	n:4350000
Cons ci ratio: 4.205375e-03	ci left: 1.661385e-01	ci right 1.668389e-01	k: 724225	n:4350000
KS ci ratio: 1.377219e-01	ci left: 1.733818e-04	ci right 1.992452e-04	k: 809	n:4350000
ATAD2   4350000 perm   9541 sec   (456 perm/sec)   p_kst 1.859770e-04   p_cons 1.664885e-01   p_joint 2.239080e-04

Joint ci ratio: 1.253978e-01	ci left: 2.100293e-04	ci right 2.383479e-04	k: 976	n:4360000
Cons ci ratio: 4.200466e-03	ci left: 1.661445e-01	ci right 1.668440e-01	k: 725914	n:4360000
KS ci ratio: 1.377219e-01	ci left: 1.729841e-04	ci right 1.987883e-04	k: 809	n:4360000
ATAD2   4360000 perm   9582 sec   (455 perm/sec)   p_kst 1.855505e-04   p_cons 1.664940e-01   p_joint 2.238532e-04

Joint ci ratio: 1.252058e-01	ci left: 2.102136e-04	ci right 2.385104e-04	k: 979	n:4370000
Cons ci ratio: 4.195660e-03	ci left: 1.661447e-01	ci right 1.668434e-01	k: 727578	n:4370000
KS ci ratio: 1.374676e-01	ci left: 1.732511e-04	ci right 1.990435e-04	k: 812	n:4370000
ATAD2   4370000 perm   9623 sec   (454 perm/sec)   p_kst 1.858124e-04   p_cons 1.664938e-01   p_joint 2.240275e-04

Joint ci ratio: 1.250782e-01	ci left: 2.101760e-04	ci right 2.384368e-04	k: 981	n:4380000
Cons ci ratio: 4.190888e-03	ci left: 1.661437e-01	ci right 1.668417e-01	k: 729237	n:4380000
KS ci ratio: 1.373831e-01	ci left: 1.730760e-04	ci right 1.988252e-04	k: 813	n:4380000
ATAD2   4380000 perm   9665 sec   (453 perm/sec)   p_kst 1.856164e-04   p_cons 1.664925e-01   p_joint 2.239726e-04

Joint ci ratio: 1.249510e-01	ci left: 2.101386e-04	ci right 2.383635e-04	k: 983	n:4390000
Cons ci ratio: 4.185992e-03	ci left: 1.661521e-01	ci right 1.668493e-01	k: 730937	n:4390000
KS ci ratio: 1.372988e-01	ci left: 1.729017e-04	ci right 1.986079e-04	k: 814	n:4390000
ATAD2   4390000 perm   9706 sec   (452 perm/sec)   p_kst 1.854214e-04   p_cons 1.665005e-01   p_joint 2.239180e-04

Joint ci ratio: 1.246978e-01	ci left: 2.105417e-04	ci right 2.387592e-04	k: 987	n:4400000
Cons ci ratio: 4.181096e-03	ci left: 1.661616e-01	ci right 1.668580e-01	k: 732642	n:4400000
KS ci ratio: 1.371307e-01	ci left: 1.729477e-04	ci right 1.986267e-04	k: 816	n:4400000
ATAD2   4400000 perm   9748 sec   (451 perm/sec)   p_kst 1.854545e-04   p_cons 1.665095e-01   p_joint 2.243182e-04

Joint ci ratio: 1.246978e-01	ci left: 2.100643e-04	ci right 2.382178e-04	k: 987	n:4410000
Cons ci ratio: 4.176110e-03	ci left: 1.661780e-01	ci right 1.668737e-01	k: 734378	n:4410000
KS ci ratio: 1.371307e-01	ci left: 1.725556e-04	ci right 1.981763e-04	k: 816	n:4410000
ATAD2   4410000 perm   9789 sec   (451 perm/sec)   p_kst 1.850340e-04   p_cons 1.665256e-01   p_joint 2.238095e-04

Joint ci ratio: 1.244461e-01	ci left: 2.104658e-04	ci right 2.386120e-04	k: 991	n:4420000
Cons ci ratio: 4.171310e-03	ci left: 1.661833e-01	ci right 1.668782e-01	k: 736065	n:4420000
KS ci ratio: 1.369632e-01	ci left: 1.726021e-04	ci right 1.981959e-04	k: 818	n:4420000
ATAD2   4420000 perm   9830 sec   (450 perm/sec)   p_kst 1.850679e-04   p_cons 1.665305e-01   p_joint 2.242081e-04

Joint ci ratio: 1.242584e-01	ci left: 2.106469e-04	ci right 2.387716e-04	k: 994	n:4430000
Cons ci ratio: 4.166665e-03	ci left: 1.661794e-01	ci right 1.668734e-01	k: 737711	n:4430000
KS ci ratio: 1.367130e-01	ci left: 1.728665e-04	ci right 1.984489e-04	k: 821	n:4430000
ATAD2   4430000 perm   9872 sec   (449 perm/sec)   p_kst 1.853273e-04   p_cons 1.665262e-01   p_joint 2.243792e-04

Joint ci ratio: 1.241960e-01	ci left: 2.103906e-04	ci right 2.384661e-04	k: 995	n:4440000
Cons ci ratio: 4.161765e-03	ci left: 1.661934e-01	ci right 1.668867e-01	k: 739437	n:4440000
KS ci ratio: 1.366299e-01	ci left: 1.726947e-04	ci right 1.982348e-04	k: 822	n:4440000
ATAD2   4440000 perm   9914 sec   (448 perm/sec)   p_kst 1.851351e-04   p_cons 1.665399e-01   p_joint 2.240991e-04

Joint ci ratio: 1.240094e-01	ci left: 2.105711e-04	ci right 2.386253e-04	k: 998	n:4450000
Cons ci ratio: 4.156828e-03	ci left: 1.662110e-01	ci right 1.669036e-01	k: 741179	n:4450000
KS ci ratio: 1.365470e-01	ci left: 1.725237e-04	ci right 1.980218e-04	k: 823	n:4450000
ATAD2   4450000 perm   9956 sec   (447 perm/sec)   p_kst 1.849438e-04   p_cons 1.665571e-01   p_joint 2.242697e-04

Joint ci ratio: 1.239474e-01	ci left: 2.103162e-04	ci right 2.383214e-04	k: 999	n:4460000
Cons ci ratio: 4.152191e-03	ci left: 1.662097e-01	ci right 1.669015e-01	k: 742837	n:4460000
KS ci ratio: 1.364642e-01	ci left: 1.723534e-04	ci right 1.978096e-04	k: 824	n:4460000
ATAD2   4460000 perm   9997 sec   (446 perm/sec)   p_kst 1.847534e-04   p_cons 1.665554e-01   p_joint 2.239910e-04

Joint ci ratio: 1.238236e-01	ci left: 2.102793e-04	ci right 2.382495e-04	k: 1001	n:4470000
Cons ci ratio: 4.147225e-03	ci left: 1.662314e-01	ci right 1.669225e-01	k: 744598	n:4470000
KS ci ratio: 1.362168e-01	ci left: 1.726161e-04	ci right 1.980611e-04	k: 827	n:4470000
ATAD2   4470000 perm   10039 sec   (445 perm/sec)   p_kst 1.850112e-04   p_cons 1.665767e-01   p_joint 2.239374e-04

Joint ci ratio: 1.242585e-01	ci left: 2.082959e-04	ci right 2.361068e-04	k: 994	n:4480000
Cons ci ratio: 4.142526e-03	ci left: 1.662363e-01	ci right 1.669266e-01	k: 746284	n:4480000
KS ci ratio: 1.361346e-01	ci left: 1.724464e-04	ci right 1.978498e-04	k: 828	n:4480000
ATAD2   4480000 perm   10081 sec   (444 perm/sec)   p_kst 1.848214e-04   p_cons 1.665812e-01   p_joint 2.218750e-04

Joint ci ratio: 1.239475e-01	ci left: 2.089110e-04	ci right 2.367291e-04	k: 999	n:4490000
Cons ci ratio: 4.137777e-03	ci left: 1.662457e-01	ci right 1.669352e-01	k: 747990	n:4490000
KS ci ratio: 1.358073e-01	ci left: 1.729229e-04	ci right 1.983304e-04	k: 832	n:4490000
ATAD2   4490000 perm   10124 sec   (444 perm/sec)   p_kst 1.853007e-04   p_cons 1.665902e-01   p_joint 2.224944e-04

Joint ci ratio: 1.238237e-01	ci left: 2.088774e-04	ci right 2.366612e-04	k: 1001	n:4500000
Cons ci ratio: 4.133183e-03	ci left: 1.662456e-01	ci right 1.669344e-01	k: 749654	n:4500000
KS ci ratio: 1.358074e-01	ci left: 1.725386e-04	ci right 1.978896e-04	k: 832	n:4500000
ATAD2   4500000 perm   10166 sec   (443 perm/sec)   p_kst 1.848889e-04   p_cons 1.665898e-01   p_joint 2.224444e-04

Joint ci ratio: 1.237620e-01	ci left: 2.086291e-04	ci right 2.363651e-04	k: 1002	n:4510000
Cons ci ratio: 4.128602e-03	ci left: 1.662458e-01	ci right 1.669338e-01	k: 751319	n:4510000
KS ci ratio: 1.355635e-01	ci left: 1.727986e-04	ci right 1.981386e-04	k: 835	n:4510000
ATAD2   4510000 perm   10209 sec   (442 perm/sec)   p_kst 1.851441e-04   p_cons 1.665896e-01   p_joint 2.221729e-04

Joint ci ratio: 1.237003e-01	ci left: 2.083819e-04	ci right 2.360702e-04	k: 1003	n:4520000
Cons ci ratio: 4.123864e-03	ci left: 1.662575e-01	ci right 1.669447e-01	k: 753036	n:4520000
KS ci ratio: 1.354825e-01	ci left: 1.726301e-04	ci right 1.979290e-04	k: 836	n:4520000
ATAD2   4520000 perm   10252 sec   (441 perm/sec)   p_kst 1.849558e-04   p_cons 1.666009e-01   p_joint 2.219027e-04

Joint ci ratio: 1.235773e-01	ci left: 2.083498e-04	ci right 2.360043e-04	k: 1005	n:4530000
Cons ci ratio: 4.119267e-03	ci left: 1.662607e-01	ci right 1.669472e-01	k: 754715	n:4530000
KS ci ratio: 1.353209e-01	ci left: 1.726756e-04	ci right 1.979485e-04	k: 838	n:4530000
ATAD2   4530000 perm   10295 sec   (440 perm/sec)   p_kst 1.849890e-04   p_cons 1.666038e-01   p_joint 2.218543e-04

Joint ci ratio: 1.338139e-01	ci left: 1.763394e-04	ci right 2.018383e-04	k: 857	n:4540000
Cons ci ratio: 4.114963e-03	ci left: 1.662452e-01	ci right 1.669310e-01	k: 756309	n:4540000
KS ci ratio: 1.461797e-01	ci left: 1.467927e-04	ci right 1.701522e-04	k: 718	n:4540000
ATAD2   4540000 perm   10338 sec   (439 perm/sec)   p_kst 1.581498e-04   p_cons 1.665879e-01   p_joint 1.887665e-04

Joint ci ratio: 1.336582e-01	ci left: 1.763767e-04	ci right 2.018489e-04	k: 859	n:4550000
Cons ci ratio: 4.110286e-03	ci left: 1.662560e-01	ci right 1.669409e-01	k: 758022	n:4550000
KS ci ratio: 1.461798e-01	ci left: 1.464701e-04	ci right 1.697782e-04	k: 718	n:4550000
ATAD2   4550000 perm   10381 sec   (438 perm/sec)   p_kst 1.578022e-04   p_cons 1.665982e-01   p_joint 1.887912e-04

Joint ci ratio: 1.335806e-01	ci left: 1.762018e-04	ci right 2.016329e-04	k: 860	n:4560000
Cons ci ratio: 4.105954e-03	ci left: 1.662443e-01	ci right 1.669285e-01	k: 759633	n:4560000
KS ci ratio: 1.460782e-01	ci left: 1.463602e-04	ci right 1.696332e-04	k: 719	n:4560000
ATAD2   4560000 perm   10423 sec   (437 perm/sec)   p_kst 1.576754e-04   p_cons 1.665862e-01   p_joint 1.885965e-04

Joint ci ratio: 1.334257e-01	ci left: 1.762393e-04	ci right 2.016439e-04	k: 862	n:4570000
Cons ci ratio: 4.101430e-03	ci left: 1.662467e-01	ci right 1.669301e-01	k: 761308	n:4570000
KS ci ratio: 1.459769e-01	ci left: 1.462507e-04	ci right 1.694888e-04	k: 720	n:4570000
ATAD2   4570000 perm   10467 sec   (437 perm/sec)   p_kst 1.575492e-04   p_cons 1.665882e-01   p_joint 1.886214e-04

Joint ci ratio: 1.332714e-01	ci left: 1.762766e-04	ci right 2.016549e-04	k: 864	n:4580000
Cons ci ratio: 4.096969e-03	ci left: 1.662458e-01	ci right 1.669285e-01	k: 762968	n:4580000
KS ci ratio: 1.456741e-01	ci left: 1.465625e-04	ci right 1.697977e-04	k: 723	n:4580000
ATAD2   4580000 perm   10510 sec   (436 perm/sec)   p_kst 1.578603e-04   p_cons 1.665869e-01   p_joint 1.886463e-04

Joint ci ratio: 1.331944e-01	ci left: 1.761032e-04	ci right 2.014407e-04	k: 865	n:4590000
Cons ci ratio: 4.092577e-03	ci left: 1.662411e-01	ci right 1.669231e-01	k: 764611	n:4590000
KS ci ratio: 1.456741e-01	ci left: 1.462432e-04	ci right 1.694277e-04	k: 723	n:4590000
ATAD2   4590000 perm   10554 sec   (435 perm/sec)   p_kst 1.575163e-04   p_cons 1.665819e-01   p_joint 1.884532e-04

Joint ci ratio: 1.329643e-01	ci left: 1.763508e-04	ci right 2.016767e-04	k: 868	n:4600000
Cons ci ratio: 4.088286e-03	ci left: 1.662307e-01	ci right 1.669119e-01	k: 766227	n:4600000
KS ci ratio: 1.452734e-01	ci left: 1.467632e-04	ci right 1.699606e-04	k: 727	n:4600000
ATAD2   4600000 perm   10597 sec   (434 perm/sec)   p_kst 1.580435e-04   p_cons 1.665711e-01   p_joint 1.886957e-04

Joint ci ratio: 1.326593e-01	ci left: 1.768071e-04	ci right 2.021357e-04	k: 872	n:4610000
Cons ci ratio: 4.083801e-03	ci left: 1.662344e-01	ci right 1.669148e-01	k: 767908	n:4610000
KS ci ratio: 1.446783e-01	ci left: 1.476992e-04	ci right 1.709406e-04	k: 733	n:4610000
ATAD2   4610000 perm   10641 sec   (433 perm/sec)   p_kst 1.590022e-04   p_cons 1.665744e-01   p_joint 1.891540e-04

Joint ci ratio: 1.326593e-01	ci left: 1.764244e-04	ci right 2.016981e-04	k: 872	n:4620000
Cons ci ratio: 4.079533e-03	ci left: 1.662242e-01	ci right 1.669039e-01	k: 769525	n:4620000
KS ci ratio: 1.446783e-01	ci left: 1.473795e-04	ci right 1.705706e-04	k: 733	n:4620000
ATAD2   4620000 perm   10685 sec   (432 perm/sec)   p_kst 1.586580e-04   p_cons 1.665639e-01   p_joint 1.887446e-04

Joint ci ratio: 1.326594e-01	ci left: 1.760434e-04	ci right 2.012625e-04	k: 872	n:4630000
Cons ci ratio: 4.075143e-03	ci left: 1.662234e-01	ci right 1.669023e-01	k: 771185	n:4630000
KS ci ratio: 1.446784e-01	ci left: 1.470612e-04	ci right 1.702022e-04	k: 733	n:4630000
ATAD2   4630000 perm   10729 sec   (432 perm/sec)   p_kst 1.583153e-04   p_cons 1.665626e-01   p_joint 1.883369e-04

Joint ci ratio: 1.324320e-01	ci left: 1.762891e-04	ci right 2.014967e-04	k: 875	n:4640000
Cons ci ratio: 4.070821e-03	ci left: 1.662189e-01	ci right 1.668971e-01	k: 772828	n:4640000
KS ci ratio: 1.443836e-01	ci left: 1.473674e-04	ci right 1.705053e-04	k: 736	n:4640000
ATAD2   4640000 perm   10773 sec   (431 perm/sec)   p_kst 1.586207e-04   p_cons 1.665578e-01   p_joint 1.885776e-04

Joint ci ratio: 1.322058e-01	ci left: 1.765338e-04	ci right 2.017299e-04	k: 878	n:4650000
Cons ci ratio: 4.066440e-03	ci left: 1.662193e-01	ci right 1.668968e-01	k: 774494	n:4650000
KS ci ratio: 1.442857e-01	ci left: 1.472578e-04	ci right 1.703614e-04	k: 737	n:4650000
ATAD2   4650000 perm   10816 sec   (430 perm/sec)   p_kst 1.584946e-04   p_cons 1.665578e-01   p_joint 1.888172e-04

Joint ci ratio: 1.321307e-01	ci left: 1.763624e-04	ci right 2.015187e-04	k: 879	n:4660000
Cons ci ratio: 4.062139e-03	ci left: 1.662153e-01	ci right 1.668920e-01	k: 776139	n:4660000
KS ci ratio: 1.441881e-01	ci left: 1.471486e-04	ci right 1.702182e-04	k: 738	n:4660000
ATAD2   4660000 perm   10859 sec   (429 perm/sec)   p_kst 1.583691e-04   p_cons 1.665534e-01   p_joint 1.886266e-04

Joint ci ratio: 1.319060e-01	ci left: 1.766060e-04	ci right 2.017508e-04	k: 882	n:4670000
Cons ci ratio: 4.057821e-03	ci left: 1.662134e-01	ci right 1.668894e-01	k: 777794	n:4670000
KS ci ratio: 1.438963e-01	ci left: 1.474528e-04	ci right 1.705192e-04	k: 741	n:4670000
ATAD2   4670000 perm   10903 sec   (428 perm/sec)   p_kst 1.586724e-04   p_cons 1.665512e-01   p_joint 1.888651e-04

Joint ci ratio: 1.318314e-01	ci left: 1.764352e-04	ci right 2.015404e-04	k: 883	n:4680000
Cons ci ratio: 4.053472e-03	ci left: 1.662145e-01	ci right 1.668898e-01	k: 779463	n:4680000
KS ci ratio: 1.438963e-01	ci left: 1.471377e-04	ci right 1.701549e-04	k: 741	n:4680000
ATAD2   4680000 perm   10945 sec   (428 perm/sec)   p_kst 1.583333e-04   p_cons 1.665519e-01   p_joint 1.886752e-04

Joint ci ratio: 1.238861e-01	ci left: 2.002087e-04	ci right 2.268539e-04	k: 1000	n:4690000
Cons ci ratio: 4.049306e-03	ci left: 1.662041e-01	ci right 1.668786e-01	k: 781078	n:4690000
KS ci ratio: 1.437994e-01	ci left: 1.470295e-04	ci right 1.700130e-04	k: 742	n:4690000
ATAD2   4690000 perm   10989 sec   (427 perm/sec)   p_kst 1.582090e-04   p_cons 1.665412e-01   p_joint 2.132196e-04

Joint ci ratio: 1.237009e-01	ci left: 2.004013e-04	ci right 2.270293e-04	k: 1003	n:4700000
Cons ci ratio: 4.044889e-03	ci left: 1.662118e-01	ci right 1.668857e-01	k: 782778	n:4700000
KS ci ratio: 1.433180e-01	ci left: 1.477423e-04	ci right 1.707532e-04	k: 747	n:4700000
ATAD2   4700000 perm   11034 sec   (426 perm/sec)   p_kst 1.589362e-04   p_cons 1.665485e-01   p_joint 2.134043e-04

Joint ci ratio: 1.234552e-01	ci left: 2.007988e-04	ci right 2.274228e-04	k: 1007	n:4710000
Cons ci ratio: 4.040535e-03	ci left: 1.662161e-01	ci right 1.668892e-01	k: 784462	n:4710000
KS ci ratio: 1.430314e-01	ci left: 1.480427e-04	ci right 1.710505e-04	k: 750	n:4710000
ATAD2   4710000 perm   11077 sec   (425 perm/sec)   p_kst 1.592357e-04   p_cons 1.665524e-01   p_joint 2.138004e-04

Joint ci ratio: 1.232719e-01	ci left: 2.009894e-04	ci right 2.275961e-04	k: 1010	n:4720000
Cons ci ratio: 4.036227e-03	ci left: 1.662182e-01	ci right 1.668907e-01	k: 786136	n:4720000
KS ci ratio: 1.427466e-01	ci left: 1.483420e-04	ci right 1.713464e-04	k: 753	n:4720000
ATAD2   4720000 perm   11122 sec   (424 perm/sec)   p_kst 1.595339e-04   p_cons 1.665542e-01   p_joint 2.139831e-04

Joint ci ratio: 1.230894e-01	ci left: 2.011792e-04	ci right 2.277688e-04	k: 1013	n:4730000
Cons ci ratio: 4.032039e-03	ci left: 1.662130e-01	ci right 1.668847e-01	k: 787775	n:4730000
KS ci ratio: 1.426520e-01	ci left: 1.482322e-04	ci right 1.712031e-04	k: 754	n:4730000
ATAD2   4730000 perm   11167 sec   (424 perm/sec)   p_kst 1.594080e-04   p_cons 1.665486e-01   p_joint 2.141649e-04

Joint ci ratio: 1.228473e-01	ci left: 2.015727e-04	ci right 2.281581e-04	k: 1017	n:4740000
Cons ci ratio: 4.027721e-03	ci left: 1.662176e-01	ci right 1.668887e-01	k: 789461	n:4740000
KS ci ratio: 1.422756e-01	ci left: 1.487333e-04	ci right 1.717158e-04	k: 758	n:4740000
ATAD2   4740000 perm   11212 sec   (423 perm/sec)   p_kst 1.599156e-04   p_cons 1.665530e-01   p_joint 2.145570e-04

Joint ci ratio: 1.224868e-01	ci left: 2.023727e-04	ci right 2.289796e-04	k: 1023	n:4750000
Cons ci ratio: 4.023337e-03	ci left: 1.662278e-01	ci right 1.668981e-01	k: 791173	n:4750000
KS ci ratio: 1.418092e-01	ci left: 1.494354e-04	ci right 1.724443e-04	k: 763	n:4750000
ATAD2   4750000 perm   11257 sec   (422 perm/sec)   p_kst 1.606316e-04   p_cons 1.665627e-01   p_joint 2.153684e-04

Joint ci ratio: 1.223673e-01	ci left: 2.023549e-04	ci right 2.289316e-04	k: 1025	n:4760000
Cons ci ratio: 4.019162e-03	ci left: 1.662244e-01	ci right 1.668940e-01	k: 792821	n:4760000
KS ci ratio: 1.415316e-01	ci left: 1.497294e-04	ci right 1.727346e-04	k: 766	n:4760000
ATAD2   4760000 perm   11303 sec   (421 perm/sec)   p_kst 1.609244e-04   p_cons 1.665590e-01   p_joint 2.153361e-04

Joint ci ratio: 1.221888e-01	ci left: 2.025403e-04	ci right 2.290998e-04	k: 1028	n:4770000
Cons ci ratio: 4.014919e-03	ci left: 1.662267e-01	ci right 1.668957e-01	k: 794496	n:4770000
KS ci ratio: 1.413474e-01	ci left: 1.498199e-04	ci right 1.728066e-04	k: 768	n:4770000
ATAD2   4770000 perm   11349 sec   (420 perm/sec)   p_kst 1.610063e-04   p_cons 1.665610e-01   p_joint 2.155136e-04

Joint ci ratio: 1.264389e-01	ci left: 1.883328e-04	ci right 2.139527e-04	k: 960	n:4780000
Cons ci ratio: 4.010761e-03	ci left: 1.662240e-01	ci right 1.668923e-01	k: 796147	n:4780000
KS ci ratio: 1.411640e-01	ci left: 1.499101e-04	ci right 1.728783e-04	k: 770	n:4780000
ATAD2   4780000 perm   11395 sec   (419 perm/sec)   p_kst 1.610879e-04   p_cons 1.665579e-01   p_joint 2.008368e-04

Joint ci ratio: 1.262420e-01	ci left: 1.885462e-04	ci right 2.141521e-04	k: 963	n:4790000
Cons ci ratio: 4.006704e-03	ci left: 1.662153e-01	ci right 1.668828e-01	k: 797769	n:4790000
KS ci ratio: 1.409812e-01	ci left: 1.500000e-04	ci right 1.729496e-04	k: 772	n:4790000
ATAD2   4790000 perm   11442 sec   (419 perm/sec)   p_kst 1.611691e-04   p_cons 1.665489e-01   p_joint 2.010438e-04

Joint ci ratio: 1.267692e-01	ci left: 1.865394e-04	ci right 2.119866e-04	k: 955	n:4800000
Cons ci ratio: 4.002469e-03	ci left: 1.662197e-01	ci right 1.668865e-01	k: 799454	n:4800000
KS ci ratio: 1.409812e-01	ci left: 1.496875e-04	ci right 1.725893e-04	k: 772	n:4800000
ATAD2   4800000 perm   11486 sec   (418 perm/sec)   p_kst 1.608333e-04   p_cons 1.665529e-01   p_joint 1.989583e-04

Joint ci ratio: 1.267692e-01	ci left: 1.861516e-04	ci right 2.115458e-04	k: 955	n:4810000
Cons ci ratio: 3.998365e-03	ci left: 1.662160e-01	ci right 1.668821e-01	k: 801100	n:4810000
KS ci ratio: 1.407992e-01	ci left: 1.497774e-04	ci right 1.726609e-04	k: 774	n:4810000
ATAD2   4810000 perm   11533 sec   (417 perm/sec)   p_kst 1.609148e-04   p_cons 1.665489e-01   p_joint 1.985447e-04

Joint ci ratio: 1.265708e-01	ci left: 1.863681e-04	ci right 2.117491e-04	k: 958	n:4820000
Cons ci ratio: 3.994300e-03	ci left: 1.662104e-01	ci right 1.668759e-01	k: 802737	n:4820000
KS ci ratio: 1.406179e-01	ci left: 1.498670e-04	ci right 1.727323e-04	k: 776	n:4820000
ATAD2   4820000 perm   11579 sec   (416 perm/sec)   p_kst 1.609959e-04   p_cons 1.665429e-01   p_joint 1.987552e-04

Joint ci ratio: 1.263733e-01	ci left: 1.865837e-04	ci right 2.119514e-04	k: 961	n:4830000
Cons ci ratio: 3.990355e-03	ci left: 1.661975e-01	ci right 1.668622e-01	k: 804338	n:4830000
KS ci ratio: 1.404372e-01	ci left: 1.499562e-04	ci right 1.728033e-04	k: 778	n:4830000
ATAD2   4830000 perm   11625 sec   (415 perm/sec)   p_kst 1.610766e-04   p_cons 1.665296e-01   p_joint 1.989648e-04

Joint ci ratio: 1.261113e-01	ci left: 1.869985e-04	ci right 2.123660e-04	k: 965	n:4840000
Cons ci ratio: 3.986246e-03	ci left: 1.661967e-01	ci right 1.668607e-01	k: 805998	n:4840000
KS ci ratio: 1.401676e-01	ci left: 1.502445e-04	ci right 1.730878e-04	k: 781	n:4840000
ATAD2   4840000 perm   11671 sec   (415 perm/sec)   p_kst 1.613636e-04   p_cons 1.665285e-01   p_joint 1.993802e-04

Joint ci ratio: 1.261114e-01	ci left: 1.866130e-04	ci right 2.119282e-04	k: 965	n:4850000
Cons ci ratio: 3.982245e-03	ci left: 1.661894e-01	ci right 1.668527e-01	k: 807626	n:4850000
KS ci ratio: 1.400780e-01	ci left: 1.501337e-04	ci right 1.729443e-04	k: 782	n:4850000
ATAD2   4850000 perm   11716 sec   (414 perm/sec)   p_kst 1.612371e-04   p_cons 1.665208e-01   p_joint 1.989691e-04

Joint ci ratio: 1.259160e-01	ci left: 1.868268e-04	ci right 2.121288e-04	k: 968	n:4860000
Cons ci ratio: 3.978264e-03	ci left: 1.661814e-01	ci right 1.668441e-01	k: 809251	n:4860000
KS ci ratio: 1.399887e-01	ci left: 1.500233e-04	ci right 1.728014e-04	k: 783	n:4860000
ATAD2   4860000 perm   11762 sec   (413 perm/sec)   p_kst 1.611111e-04   p_cons 1.665126e-01   p_joint 1.991770e-04

Joint ci ratio: 1.256569e-01	ci left: 1.872387e-04	ci right 2.125404e-04	k: 972	n:4870000
Cons ci ratio: 3.974025e-03	ci left: 1.661924e-01	ci right 1.668544e-01	k: 810968	n:4870000
KS ci ratio: 1.395444e-01	ci left: 1.507060e-04	ci right 1.735092e-04	k: 788	n:4870000
ATAD2   4870000 perm   11810 sec   (412 perm/sec)   p_kst 1.618070e-04   p_cons 1.665232e-01   p_joint 1.995893e-04

Joint ci ratio: 1.255279e-01	ci left: 1.872520e-04	ci right 2.125276e-04	k: 974	n:4880000
Cons ci ratio: 3.970084e-03	ci left: 1.661835e-01	ci right 1.668448e-01	k: 812588	n:4880000
KS ci ratio: 1.393678e-01	ci left: 1.507927e-04	ci right 1.735778e-04	k: 790	n:4880000
ATAD2   4880000 perm   11856 sec   (412 perm/sec)   p_kst 1.618852e-04   p_cons 1.665139e-01   p_joint 1.995902e-04

Joint ci ratio: 1.255279e-01	ci left: 1.868691e-04	ci right 2.120930e-04	k: 974	n:4890000
Cons ci ratio: 3.965953e-03	ci left: 1.661887e-01	ci right 1.668493e-01	k: 814277	n:4890000
KS ci ratio: 1.393679e-01	ci left: 1.504844e-04	ci right 1.732228e-04	k: 790	n:4890000
ATAD2   4890000 perm   11903 sec   (411 perm/sec)   p_kst 1.615542e-04   p_cons 1.665188e-01   p_joint 1.991820e-04

Joint ci ratio: 1.253353e-01	ci left: 1.870807e-04	ci right 2.122916e-04	k: 977	n:4900000
Cons ci ratio: 3.961968e-03	ci left: 1.661845e-01	ci right 1.668444e-01	k: 815920	n:4900000
KS ci ratio: 1.390168e-01	ci left: 1.509652e-04	ci right 1.737140e-04	k: 794	n:4900000
ATAD2   4900000 perm   11949 sec   (410 perm/sec)   p_kst 1.620408e-04   p_cons 1.665143e-01   p_joint 1.993878e-04

Joint ci ratio: 1.252073e-01	ci left: 1.870943e-04	ci right 2.122793e-04	k: 979	n:4910000
Cons ci ratio: 3.957886e-03	ci left: 1.661881e-01	ci right 1.668473e-01	k: 817601	n:4910000
KS ci ratio: 1.388422e-01	ci left: 1.510509e-04	ci right 1.737817e-04	k: 796	n:4910000
ATAD2   4910000 perm   11996 sec   (409 perm/sec)   p_kst 1.621181e-04   p_cons 1.665175e-01   p_joint 1.993890e-04

Joint ci ratio: 1.250797e-01	ci left: 1.871078e-04	ci right 2.122671e-04	k: 981	n:4920000
Cons ci ratio: 3.953891e-03	ci left: 1.661864e-01	ci right 1.668449e-01	k: 819256	n:4920000
KS ci ratio: 1.386684e-01	ci left: 1.511363e-04	ci right 1.738491e-04	k: 798	n:4920000
ATAD2   4920000 perm   12043 sec   (409 perm/sec)   p_kst 1.621951e-04   p_cons 1.665154e-01   p_joint 1.993902e-04

Joint ci ratio: 1.255925e-01	ci left: 1.851564e-04	ci right 2.101630e-04	k: 973	n:4930000
Cons ci ratio: 3.949793e-03	ci left: 1.661927e-01	ci right 1.668507e-01	k: 820951	n:4930000
KS ci ratio: 1.386684e-01	ci left: 1.508297e-04	ci right 1.734965e-04	k: 798	n:4930000
ATAD2   4930000 perm   12091 sec   (408 perm/sec)   p_kst 1.618661e-04   p_cons 1.665215e-01   p_joint 1.973631e-04

Joint ci ratio: 1.255925e-01	ci left: 1.847816e-04	ci right 2.097375e-04	k: 973	n:4940000
Cons ci ratio: 3.945920e-03	ci left: 1.661841e-01	ci right 1.668414e-01	k: 822572	n:4940000
KS ci ratio: 1.384088e-01	ci left: 1.511106e-04	ci right 1.737736e-04	k: 801	n:4940000
ATAD2   4940000 perm   12138 sec   (407 perm/sec)   p_kst 1.621457e-04   p_cons 1.665126e-01   p_joint 1.969636e-04

Joint ci ratio: 1.254638e-01	ci left: 1.847996e-04	ci right 2.097305e-04	k: 975	n:4950000
Cons ci ratio: 3.941812e-03	ci left: 1.661929e-01	ci right 1.668495e-01	k: 824279	n:4950000
KS ci ratio: 1.379793e-01	ci left: 1.517805e-04	ci right 1.744675e-04	k: 806	n:4950000
ATAD2   4950000 perm   12186 sec   (406 perm/sec)   p_kst 1.628283e-04   p_cons 1.665210e-01   p_joint 1.969697e-04

Joint ci ratio: 1.253354e-01	ci left: 1.848176e-04	ci right 2.097236e-04	k: 977	n:4960000
Cons ci ratio: 3.938029e-03	ci left: 1.661797e-01	ci right 1.668356e-01	k: 825877	n:4960000
KS ci ratio: 1.379793e-01	ci left: 1.514745e-04	ci right 1.741158e-04	k: 806	n:4960000
ATAD2   4960000 perm   12232 sec   (405 perm/sec)   p_kst 1.625000e-04   p_cons 1.665075e-01   p_joint 1.969758e-04

Joint ci ratio: 1.250162e-01	ci left: 1.854203e-04	ci right 2.103391e-04	k: 982	n:4970000
Cons ci ratio: 3.933977e-03	ci left: 1.661863e-01	ci right 1.668415e-01	k: 827573	n:4970000
KS ci ratio: 1.376386e-01	ci left: 1.519468e-04	ci right 1.745980e-04	k: 810	n:4970000
ATAD2   4970000 perm   12279 sec   (405 perm/sec)   p_kst 1.629779e-04   p_cons 1.665137e-01   p_joint 1.975855e-04

Joint ci ratio: 1.247626e-01	ci left: 1.858261e-04	ci right 2.107450e-04	k: 986	n:4980000
Cons ci ratio: 3.930011e-03	ci left: 1.661876e-01	ci right 1.668421e-01	k: 829243	n:4980000
KS ci ratio: 1.372162e-01	ci left: 1.526112e-04	ci right 1.752859e-04	k: 815	n:4980000
ATAD2   4980000 perm   12326 sec   (404 perm/sec)   p_kst 1.636546e-04   p_cons 1.665147e-01   p_joint 1.979920e-04

Joint ci ratio: 1.245734e-01	ci left: 1.860362e-04	ci right 2.109426e-04	k: 989	n:4990000
Cons ci ratio: 3.925933e-03	ci left: 1.661977e-01	ci right 1.668516e-01	k: 830957	n:4990000
KS ci ratio: 1.368811e-01	ci left: 1.530795e-04	ci right 1.757637e-04	k: 819	n:4990000
ATAD2   4990000 perm   12374 sec   (403 perm/sec)   p_kst 1.641283e-04   p_cons 1.665244e-01   p_joint 1.981964e-04

Joint ci ratio: 1.245734e-01	ci left: 1.856641e-04	ci right 2.105208e-04	k: 989	n:5000000
Cons ci ratio: 3.922189e-03	ci left: 1.661850e-01	ci right 1.668382e-01	k: 832557	n:5000000
KS ci ratio: 1.367977e-01	ci left: 1.529665e-04	ci right 1.756190e-04	k: 820	n:5000000
ATAD2   5000000 perm   12420 sec   (403 perm/sec)   p_kst 1.640000e-04   p_cons 1.665114e-01   p_joint 1.978000e-04

Outputting figure to mutsig2_images.part000000000012/ATAD2.4_4285_5000000_0.000164_0.16651_0.0001978.png
                gene_name: ATAD2
               theta_stop: 0.14 
                    nperm: 5000000 
                     p_ks: 0.00016 
        ci_ks_bounds_left: 0.00015 
       ci_ks_bounds_right: 0.00018 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.17 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.00020 
     ci_joint_bounds_left: 0.00019 
    ci_joint_bounds_right: 0.00021 

Current progress: 50 percent done.
ATG2A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.255332e-02	ci left: 7.427054e-01	ci right 7.597480e-01	k: 7513	n:10000
Cons ci ratio: 1.163479e-02	ci left: 9.135826e-01	ci right 9.243718e-01	k: 9191	n:10000
KS ci ratio: 5.875724e-02	ci left: 2.988593e-01	ci right 3.170527e-01	k: 3079	n:10000
ATG2A   10000 perm   2 sec   (4181 perm/sec)   p_kst 3.079000e-01   p_cons 9.191000e-01   p_joint 7.513000e-01

Outputting figure to mutsig2_images.part000000000012/ATG2A.2_5981_10000_0.3079_0.9191_0.7513.png
                gene_name: ATG2A
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.92 
                  p_joint: 0.75 
     ci_joint_bounds_left: 0.74 
    ci_joint_bounds_right: 0.76 

Current progress: 75 percent done.
ATG2B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.901722e-02	ci left: 8.016636e-01	ci right 8.171557e-01	k: 8095	n:10000
KS ci ratio: 6.015053e-02	ci left: 2.890454e-01	ci right 3.070724e-01	k: 2980	n:10000
ATG2B   10000 perm   2 sec   (4051 perm/sec)   p_kst 2.980000e-01   p_cons 8.095000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000012/ATG2B.2_6405_10000_0.298_0.8095_1.png
                gene_name: ATG2B
               theta_stop: 0.060 
                    nperm: 10000 
                     p_ks: 0.30 
        ci_ks_bounds_left: 0.29 
       ci_ks_bounds_right: 0.31 
                   p_cons: 0.81 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.82 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000012
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 12 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1712>
Subject: Job 8704111: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1712>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000013> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:35:17 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000013.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000013.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 13  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000013.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    193.46 sec.
    Max Memory :      5707 MB
    Max Swap   :      8483 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
13
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 13
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 13: processing genes 1087 - 1176
Calculating significance of each gene.
Using projection method.
1087	ATG4B	1
1088	ATG4C	1
1089	ATG4D	1
1090	ATG5	1
1091	ATG7	1
1092	ATG9A	2.752303e-01
1093	ATG9B	1.423222e-01
1094	ATHL1	1
1095	ATIC	1
1096	ATL1	7.797995e-02
1097	ATL2	1
1098	ATL3	1
In gene ATM the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 5730    n = 1	mu =   1.36e-07
1099	ATM	1.298961e-02
1100	ATMIN	1.962303e-01
1101	ATN1	1.374346e-01
1102	ATOH1	1
1103	ATOH7	1
1104	ATOH8	1
1105	ATOX1	1
1106	ATP10A	1
1107	ATP10B	2.181691e-01
1108	ATP10D	1
1109	ATP11A	1
1110	ATP11B	1
1111	ATP11C	1
1112	ATP12A	4.038721e-01
1113	ATP13A1	1
1114	ATP13A2	1
1115	ATP13A3	1
1116	ATP13A4	3.164337e-01
1117	ATP13A5	1
1118	ATP1A1	2.900278e-01
1119	ATP1A2	2.227686e-01
1120	ATP1A3	1
1121	ATP1A4	3.306887e-01
1122	ATP1B1	1
1123	ATP1B2	1
1124	ATP1B3	1
1125	ATP1B4	4.910169e-02
1126	ATP2A1	1
1127	ATP2A2	2.454327e-01
1128	ATP2A3	1
1129	ATP2B1	1
1130	ATP2B2	1
1131	ATP2B3	1
1132	ATP2B4	3.499507e-01
1133	ATP2C1	1
1134	ATP2C2	2.852889e-02
1135	ATP4A	1
1136	ATP4B	1
1137	ATP5A1	1
1138	ATP5B	1
1139	ATP5C1	1
1140	ATP5D	1
1141	ATP5E	1
1142	ATP5F1	1
1143	ATP5G1	1
1144	ATP5G2	1
1145	ATP5G3	1
1146	ATP5H	1
1147	ATP5I	1
1148	ATP5J	1
1149	ATP5J2	1
1150	ATP5L	1
1151	ATP5L2	1
1152	ATP5O	1
1153	ATP5S	1
1154	ATP5SL	7.381711e-02
1155	ATP6AP1	1
1156	ATP6AP1L	1
1157	ATP6AP2	1
1158	ATP6V0A1	1
1159	ATP6V0A2	1
1160	ATP6V0A4	1
1161	ATP6V0B	1
1162	ATP6V0C	1
1163	ATP6V0D1	1
1164	ATP6V0D2	1
1165	ATP6V0E1	3.354144e-02
1166	ATP6V0E2	1
1167	ATP6V1A	1
1168	ATP6V1B1	1
In gene ATP6V1B2 the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 1459    n = 1	mu =   6.96e-08
1169	ATP6V1B2	5.192800e-02
1170	ATP6V1C1	8.821667e-02
1171	ATP6V1C2	1
1172	ATP6V1D	1
1173	ATP6V1E1	1
1174	ATP6V1E2	1
1175	ATP6V1F	1
1176	ATP6V1G1	1
Done

Running MutSig 2:
Scatter job 13: processing genes 1087 - 1176
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ATM
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.149320e-01	ci left: 9.818038e-02	ci right 1.102513e-01	k: 1041	n:10000
Cons ci ratio: 2.473410e-01	ci left: 2.146516e-02	ci right 2.761609e-02	k: 244	n:10000
KS ci ratio: 2.372437e-02	ci left: 7.231012e-01	ci right 7.405635e-01	k: 7319	n:10000
ATM   10000 perm   5 sec   (1834 perm/sec)   p_kst 7.319000e-01   p_cons 2.440000e-02   p_joint 1.041000e-01

Joint ci ratio: 7.401342e-02	ci left: 1.184290e-01	ci right 1.275809e-01	k: 2459	n:20000
Cons ci ratio: 1.994351e-01	ci left: 1.705797e-02	ci right 2.088369e-02	k: 378	n:20000
KS ci ratio: 1.682937e-02	ci left: 7.244436e-01	ci right 7.367893e-01	k: 14613	n:20000
ATM   20000 perm   12 sec   (1634 perm/sec)   p_kst 7.306500e-01   p_cons 1.890000e-02   p_joint 1.229500e-01

Joint ci ratio: 6.954290e-02	ci left: 9.242652e-02	ci right 9.911867e-02	k: 2872	n:30000
Cons ci ratio: 1.637964e-01	ci left: 1.719719e-02	ci right 2.029700e-02	k: 561	n:30000
KS ci ratio: 1.411692e-02	ci left: 7.147808e-01	ci right 7.249765e-01	k: 21597	n:30000
ATM   30000 perm   15 sec   (1944 perm/sec)   p_kst 7.199000e-01   p_cons 1.870000e-02   p_joint 9.573333e-02

Joint ci ratio: 5.922812e-02	ci left: 9.576915e-02	ci right 1.016393e-01	k: 3947	n:40000
Cons ci ratio: 1.357340e-01	ci left: 1.903706e-02	ci right 2.183317e-02	k: 816	n:40000
KS ci ratio: 1.223702e-02	ci left: 7.150943e-01	ci right 7.239238e-01	k: 28781	n:40000
ATM   40000 perm   19 sec   (2142 perm/sec)   p_kst 7.195250e-01   p_cons 2.040000e-02   p_joint 9.867500e-02

Joint ci ratio: 6.509629e-02	ci left: 6.541457e-02	ci right 6.983579e-02	k: 3380	n:50000
Cons ci ratio: 1.202231e-01	ci left: 1.956696e-02	ci right 2.208911e-02	k: 1040	n:50000
KS ci ratio: 1.097837e-02	ci left: 7.143346e-01	ci right 7.222401e-01	k: 35915	n:50000
ATM   50000 perm   22 sec   (2275 perm/sec)   p_kst 7.183000e-01   p_cons 2.080000e-02   p_joint 6.760000e-02

Joint ci ratio: 6.095500e-02	ci left: 6.251440e-02	ci right 6.646119e-02	k: 3868	n:60000
Cons ci ratio: 1.101180e-01	ci left: 1.954322e-02	ci right 2.183680e-02	k: 1240	n:60000
KS ci ratio: 1.001937e-02	ci left: 7.147822e-01	ci right 7.219966e-01	k: 43104	n:60000
ATM   60000 perm   25 sec   (2365 perm/sec)   p_kst 7.184000e-01   p_cons 2.066667e-02   p_joint 6.446667e-02

Joint ci ratio: 5.656638e-02	ci left: 6.238109e-02	ci right 6.602656e-02	k: 4493	n:70000
Cons ci ratio: 1.024869e-01	ci left: 1.942126e-02	ci right 2.153304e-02	k: 1432	n:70000
KS ci ratio: 9.255516e-03	ci left: 7.159551e-01	ci right 7.226267e-01	k: 50351	n:70000
ATM   70000 perm   29 sec   (2427 perm/sec)   p_kst 7.193000e-01   p_cons 2.045714e-02   p_joint 6.418571e-02

Joint ci ratio: 5.320701e-02	ci left: 6.184446e-02	ci right 6.523728e-02	k: 5082	n:80000
Cons ci ratio: 9.612927e-02	ci left: 1.938276e-02	ci right 2.135224e-02	k: 1628	n:80000
KS ci ratio: 8.652926e-03	ci left: 7.163979e-01	ci right 7.226362e-01	k: 57562	n:80000
ATM   80000 perm   32 sec   (2468 perm/sec)   p_kst 7.195250e-01   p_cons 2.035000e-02   p_joint 6.352500e-02

Outputting figure to mutsig2_images.part000000000013/ATM.5_9419_80000_0.71952_0.02035_0.063525.png
                gene_name: ATM
               theta_stop: 0.096 
                    nperm: 80000 
                     p_ks: 0.72 
        ci_ks_bounds_left: 0.72 
       ci_ks_bounds_right: 0.72 
                   p_cons: 0.020 
      ci_cons_bounds_left: 0.019 
     ci_cons_bounds_right: 0.021 
                  p_joint: 0.064 
     ci_joint_bounds_left: 0.062 
    ci_joint_bounds_right: 0.065 

Current progress: 50 percent done.
ATP2C2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.627716e-02	ci left: 5.287694e-01	ci right 5.484081e-01	k: 5386	n:10000
KS ci ratio: 1.517575e-02	ci left: 8.629443e-01	ci right 8.762395e-01	k: 8697	n:10000
ATP2C2   10000 perm   2 sec   (5838 perm/sec)   p_kst 8.697000e-01   p_cons 5.386000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000013/ATP2C2.2_2949_10000_0.8697_0.5386_1.png
                gene_name: ATP2C2
               theta_stop: 0.036 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.86 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.54 
      ci_cons_bounds_left: 0.53 
     ci_cons_bounds_right: 0.55 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000013
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 13 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1651>
Subject: Job 8704113: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1651>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000014> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:34:47 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000014.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000014.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 14  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000014.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    140.40 sec.
    Max Memory :      5497 MB
    Max Swap   :      8290 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
14
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 14
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 14: processing genes 1177 - 1267
Calculating significance of each gene.
Using projection method.
1177	ATP6V1G2	1
1178	ATP6V1G3	1
1179	ATP6V1H	1
In gene ATP7A the following bins exceed PROBCAP:
    THCA-EL-A3GR-TP	categ 6	N = 4591    n = 1	mu =   9.98e-08
1180	ATP7A	2.537729e-01
1181	ATP7B	4.346785e-01
1182	ATP8A1	1
1183	ATP8A2	1
1184	ATP8B1	1
1185	ATP8B2	1
1186	ATP8B3	1
1187	ATP8B4	1
1188	ATP9A	1
1189	ATP9B	1
1190	ATPAF1	4.516385e-02
1191	ATPAF2	1
1192	ATPBD4	1
1193	ATPIF1	1
1194	ATR	5.890945e-01
1195	ATRIP	1
1196	ATRN	1
1197	ATRNL1	2.694544e-01
1198	ATRX	3.200868e-01
1199	ATXN1	2.158564e-01
1200	ATXN10	1
1201	ATXN2	3.900335e-01
1202	ATXN2L	1
1203	ATXN3	1
1204	ATXN3L	1
1205	ATXN7	1
1206	ATXN7L2	2.882197e-01
1207	ATXN7L3	1
1208	AUH	1
In gene AUP1 the following bins exceed PROBCAP:
    THCA-DJ-A1QN-TP	categ 6	N = 1088    n = 1	mu =   6.87e-08
1209	AUP1	3.284441e-02
1210	AURKA	1
1211	AURKAIP1	1
1212	AURKB	1
1213	AURKC	1
1214	AUTS2	1
1215	AVEN	1
1216	AVIL	1
1217	AVL9	1
1218	AVP	1.943965e-02
1219	AVPI1	1
1220	AVPR1A	1
1221	AVPR1B	1
1222	AVPR2	1
1223	AWAT1	1
1224	AWAT2	1
1225	AXIN1	1
1226	AXIN2	1
1227	AXL	1
1228	AZGP1	5.016870e-02
1229	AZI1	1
1230	AZI2	1
1231	AZIN1	1
1232	AZU1	1
1233	B2M	1
1234	B3GALNT1	1
1235	B3GALNT2	1
1236	B3GALT1	1
1237	B3GALT2	1
1238	B3GALT4	1
1239	B3GALT5	1
1240	B3GALTL	1.653125e-01
1241	B3GAT1	1.150669e-01
1242	B3GAT2	1
1243	B3GAT3	1
1244	B3GNT1	1
1245	B3GNT2	1
1246	B3GNT3	1
1247	B3GNT4	1
1248	B3GNT5	1.847284e-02
1249	B3GNT6	3.048699e-02
1250	B3GNT7	1
1251	B3GNT8	1
1252	B3GNT9	1
1253	B3GNTL1	8.515354e-02
1254	B4GALNT1	1
1255	B4GALNT2	8.111209e-02
1256	B4GALNT3	1
1257	B4GALNT4	1
1258	B4GALT1	1
1259	B4GALT2	1
1260	B4GALT3	1
1261	B4GALT4	1
1262	B4GALT5	1
1263	B4GALT6	1
1264	B4GALT7	1
1265	B9D1	1
1266	B9D2	1
1267	BAALC	1
Done

Running MutSig 2:
Scatter job 14: processing genes 1177 - 1267
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ATRX
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.966580e-02	ci left: 6.262801e-01	ci right 6.452408e-01	k: 6358	n:10000
Cons ci ratio: 6.473460e-02	ci left: 2.595354e-01	ci right 2.769998e-01	k: 2682	n:10000
KS ci ratio: 9.122527e-03	ci left: 9.441937e-01	ci right 9.529427e-01	k: 9487	n:10000
ATRX   10000 perm   3 sec   (3669 perm/sec)   p_kst 9.487000e-01   p_cons 2.682000e-01   p_joint 6.358000e-01

Outputting figure to mutsig2_images.part000000000014/ATRX.2_7619_10000_0.9487_0.2682_0.6358.png
                gene_name: ATRX
               theta_stop: 0.065 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.94 
       ci_ks_bounds_right: 0.95 
                   p_cons: 0.27 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.28 
                  p_joint: 0.64 
     ci_joint_bounds_left: 0.63 
    ci_joint_bounds_right: 0.65 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000014
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 14 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1424>
Subject: Job 8704115: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1424>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000015> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:35:16 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000015.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000015.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 15  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000015.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    264.00 sec.
    Max Memory :      5826 MB
    Max Swap   :      8495 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
15
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 15
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 15: processing genes 1268 - 1357
Calculating significance of each gene.
Using projection method.
1268	BAAT	1
1269	BACE1	1
1270	BACE2	1
1271	BACH1	1.310859e-01
1272	BACH2	1
1273	BAD	1
1274	BAG1	1
1275	BAG2	4.374081e-02
1276	BAG3	1
1277	BAG4	1
1278	BAG5	1
1279	BAGE	1
1280	BAGE2	1
1281	BAGE3	1
1282	BAGE4	1
1283	BAGE5	1
1284	BAHCC1	2.332775e-01
1285	BAHD1	1
1286	BAI1	1
1287	BAI2	3.852468e-01
1288	BAI3	1.374992e-01
1289	BAIAP2	1
1290	BAIAP2L1	1
1291	BAIAP2L2	1
1292	BAIAP3	1
1293	BAK1	1
1294	BAMBI	4.953988e-02
1295	BANF1	1
1296	BANF2	1
1297	BANK1	1
1298	BANP	1
1299	BAP1	2.235879e-01
1300	BARD1	1
1301	BARHL1	1
1302	BARHL2	3.891724e-02
1303	BARX1	1
1304	BARX2	1
1305	BASP1	1
1306	BAT1	1
In gene BAT2 the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 6590    n = 1	mu =   1.33e-07
1307	BAT2	4.461068e-02
1308	BAT2L1	1
1309	BAT2L2	6.239381e-01
1310	BAT3	1
1311	BAT4	1
1312	BAT5	1
1313	BATF	1
1314	BATF2	1
1315	BATF3	1
1316	BAX	1
1317	BAZ1A	1
1318	BAZ1B	1
1319	BAZ2A	1
1320	BAZ2B	1
1321	BBC3	1
1322	BBOX1	1
1323	BBS1	1
1324	BBS10	1
1325	BBS12	1
1326	BBS2	2.638825e-01
1327	BBS4	1
1328	BBS5	1
1329	BBS7	1
1330	BBS9	1
1331	BBX	5.424291e-02
1332	BCAM	1
1333	BCAN	1
1334	BCAP29	1
1335	BCAP31	6.466823e-02
1336	BCAR1	1
1337	BCAR3	3.489160e-01
1338	BCAS1	1
1339	BCAS2	1
1340	BCAS3	2.082471e-01
1341	BCAS4	1
1342	BCAT1	7.220322e-02
1343	BCAT2	1
1344	BCCIP	1
1345	BCDIN3D	1
1346	BCHE	1
1347	BCKDHA	1
1348	BCKDHB	1
1349	BCKDK	1
1350	BCL10	1
1351	BCL11A	3.850700e-02
1352	BCL11B	1
1353	BCL2	1
1354	BCL2A1	1
1355	BCL2L1	1
1356	BCL2L10	1
1357	BCL2L11	1
Done

Running MutSig 2:
Scatter job 15: processing genes 1268 - 1357
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
BAT2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.888152e-02	ci left: 8.038971e-01	ci right 8.193209e-01	k: 8117	n:10000
KS ci ratio: 3.523883e-02	ci left: 5.431911e-01	ci right 5.627780e-01	k: 5530	n:10000
BAT2   10000 perm   3 sec   (3724 perm/sec)   p_kst 5.530000e-01   p_cons 8.117000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000015/BAT2.3_6594_10000_0.553_0.8117_1.png
                gene_name: BAT2
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.55 
        ci_ks_bounds_left: 0.54 
       ci_ks_bounds_right: 0.56 
                   p_cons: 0.81 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.82 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
BAI3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.837348e-02	ci left: 8.122256e-01	ci right 8.273876e-01	k: 8199	n:10000
KS ci ratio: 6.133555e-02	ci left: 2.810196e-01	ci right 2.989030e-01	k: 2899	n:10000
BAI3   10000 perm   2 sec   (4518 perm/sec)   p_kst 2.899000e-01   p_cons 8.199000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000015/BAI3.2_4689_10000_0.2899_0.8199_1.png
                gene_name: BAI3
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.83 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
BBX
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.099457e-02	ci left: 7.688127e-01	ci right 7.852256e-01	k: 7771	n:10000
Cons ci ratio: 1.084215e-01	ci left: 1.092981e-01	ci right 1.219268e-01	k: 1155	n:10000
KS ci ratio: 2.494822e-02	ci left: 7.027112e-01	ci right 7.205654e-01	k: 7117	n:10000
BBX   10000 perm   2 sec   (5347 perm/sec)   p_kst 7.117000e-01   p_cons 1.155000e-01   p_joint 7.771000e-01

Joint ci ratio: 6.778990e-03	ci left: 9.403128e-01	ci right 9.467575e-01	k: 18872	n:20000
Cons ci ratio: 7.659211e-02	ci left: 1.113472e-01	ci right 1.202648e-01	k: 2315	n:20000
KS ci ratio: 1.737955e-02	ci left: 7.115061e-01	ci right 7.240305e-01	k: 14356	n:20000
BBX   20000 perm   4 sec   (4746 perm/sec)   p_kst 7.178000e-01   p_cons 1.157500e-01   p_joint 9.436000e-01

Outputting figure to mutsig2_images.part000000000015/BBX.2_2886_20000_0.7178_0.11575_0.9436.png
                gene_name: BBX
               theta_stop: 0.077 
                    nperm: 20000 
                     p_ks: 0.72 
        ci_ks_bounds_left: 0.71 
       ci_ks_bounds_right: 0.72 
                   p_cons: 0.12 
      ci_cons_bounds_left: 0.11 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.94 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.95 

Current progress: 75 percent done.
BCL11A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.472561e-02	ci left: 3.297201e-01	ci right 3.483737e-01	k: 3390	n:10000
KS ci ratio: 3.830297e-02	ci left: 5.016506e-01	ci right 5.213427e-01	k: 5115	n:10000
BCL11A   10000 perm   2 sec   (5574 perm/sec)   p_kst 5.115000e-01   p_cons 3.390000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000015/BCL11A.2_2630_10000_0.5115_0.339_1.png
                gene_name: BCL11A
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.51 
        ci_ks_bounds_left: 0.50 
       ci_ks_bounds_right: 0.52 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.35 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000015
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 15 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1654>
Subject: Job 8704116: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1654>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000016> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:34:13 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000016.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000016.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 16  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000016.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    159.48 sec.
    Max Memory :      5516 MB
    Max Swap   :      8414 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
16
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 16
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 16: processing genes 1358 - 1447
Calculating significance of each gene.
Using projection method.
1358	BCL2L12	3.702288e-02
1359	BCL2L13	1
1360	BCL2L14	1.576495e-01
1361	BCL2L15	1
1362	BCL2L2	1
1363	BCL3	1
1364	BCL6	1
1365	BCL6B	1
1366	BCL7A	1
1367	BCL7B	1
1368	BCL7C	1
1369	BCL9	1.093848e-01
1370	BCL9L	3.650727e-01
1371	BCLAF1	1
1372	BCMO1	1
1373	BCO2	1
1374	BCOR	2.537357e-01
1375	BCORL1	1
1376	BCR	1
1377	BCS1L	1
1378	BDH1	8.718075e-02
1379	BDH2	1
1380	BDKRB1	1
1381	BDKRB2	1
1382	BDNF	1
1383	BDP1	2.603486e-02
1384	BECN1	1
1385	BEGAIN	1
1386	BEND2	1
1387	BEND3	1
1388	BEND4	1
1389	BEND5	1
1390	BEND6	9.593273e-02
1391	BEND7	1
1392	BEST1	1
1393	BEST2	1
1394	BEST3	1
1395	BEST4	7.202515e-02
1396	BET1	1
1397	BET1L	1
1398	BEX1	4.605647e-02
1399	BEX2	1
1400	BEX4	1
1401	BEX5	1
1402	BFAR	2.434119e-02
1403	BFSP1	1
1404	BFSP2	5.218075e-02
1405	BGLAP	1
1406	BGN	1.068886e-02
1407	BHLHB9	1
1408	BHLHE22	3.812928e-03
1409	BHLHE23	1
1410	BHLHE40	1
1411	BHLHE41	1
1412	BHMT	1
1413	BHMT2	1
1414	BICC1	3.849341e-01
1415	BICD1	1
1416	BICD2	1
1417	BID	1
1418	BIK	1
1419	BIN1	1
1420	BIN2	1.108658e-02
1421	BIN3	1
1422	BIRC2	1
1423	BIRC3	1
1424	BIRC5	1
1425	BIRC6	1
1426	BIRC7	1
1427	BIRC8	1
1428	BIVM	1
1429	BLCAP	1
1430	BLID	1
1431	BLK	1
1432	BLM	1
1433	BLMH	1.596928e-01
1434	BLNK	1
1435	BLOC1S1	1
1436	BLOC1S2	1
1437	BLOC1S3	1
1438	BLVRA	1
1439	BLVRB	1
1440	BLZF1	1
1441	BMF	1
1442	BMI1	1
1443	BMP1	1
1444	BMP10	1
1445	BMP15	1
1446	BMP2	1
1447	BMP2K	1
Done

Running MutSig 2:
Scatter job 16: processing genes 1358 - 1447
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
BDP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.044806e-03	ci left: 9.923959e-01	ci right 9.955057e-01	k: 9941	n:10000
KS ci ratio: 2.299980e-02	ci left: 7.352249e-01	ci right 7.524328e-01	k: 7439	n:10000
BDP1   10000 perm   3 sec   (3067 perm/sec)   p_kst 7.439000e-01   p_cons 9.941000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000016/BDP1.4_8031_10000_0.7439_0.9941_1.png
                gene_name: BDP1
               theta_stop: 0.023 
                    nperm: 10000 
                     p_ks: 0.74 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.75 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
BCL9
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.370375e-02	ci left: 3.381626e-01	ci right 3.569262e-01	k: 3475	n:10000
Cons ci ratio: 6.396856e-02	ci left: 2.641865e-01	ci right 2.817460e-01	k: 2729	n:10000
KS ci ratio: 3.266055e-02	ci left: 5.804858e-01	ci right 5.998616e-01	k: 5902	n:10000
BCL9   10000 perm   2 sec   (5515 perm/sec)   p_kst 5.902000e-01   p_cons 2.729000e-01   p_joint 3.475000e-01

Outputting figure to mutsig2_images.part000000000016/BCL9.2_4309_10000_0.5902_0.2729_0.3475.png
                gene_name: BCL9
               theta_stop: 0.064 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.27 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.28 
                  p_joint: 0.35 
     ci_joint_bounds_left: 0.34 
    ci_joint_bounds_right: 0.36 

Current progress: 50 percent done.
BGN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.736385e-02	ci left: 8.285951e-01	ci right 8.432086e-01	k: 8360	n:10000
Cons ci ratio: 6.746352e-02	ci left: 2.438103e-01	ci right 2.609341e-01	k: 2523	n:10000
KS ci ratio: 4.198116e-02	ci left: 4.558845e-01	ci right 4.755355e-01	k: 4657	n:10000
BGN   10000 perm   2 sec   (6634 perm/sec)   p_kst 4.657000e-01   p_cons 2.523000e-01   p_joint 8.360000e-01

Outputting figure to mutsig2_images.part000000000016/BGN.2_1135_10000_0.4657_0.2523_0.836.png
                gene_name: BGN
               theta_stop: 0.067 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.25 
      ci_cons_bounds_left: 0.24 
     ci_cons_bounds_right: 0.26 
                  p_joint: 0.84 
     ci_joint_bounds_left: 0.83 
    ci_joint_bounds_right: 0.84 

Current progress: 75 percent done.
BIN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.243716e-02	ci left: 9.027822e-01	ci right 9.141786e-01	k: 9086	n:10000
Cons ci ratio: 1.392492e-02	ci left: 8.816556e-01	ci right 8.941174e-01	k: 8880	n:10000
KS ci ratio: 1.345887e-02	ci left: 8.884162e-01	ci right 9.005529e-01	k: 8946	n:10000
BIN2   10000 perm   2 sec   (5622 perm/sec)   p_kst 8.946000e-01   p_cons 8.880000e-01   p_joint 9.086000e-01

Outputting figure to mutsig2_images.part000000000016/BIN2.2_1750_10000_0.8946_0.888_0.9086.png
                gene_name: BIN2
               theta_stop: 0.014 
                    nperm: 10000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.89 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.91 
     ci_joint_bounds_left: 0.90 
    ci_joint_bounds_right: 0.91 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000016
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 16 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1552>
Subject: Job 8704118: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1552>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000017> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Fri Nov 16 00:36:55 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000017.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000017.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 17  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000017.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  19319.76 sec.
    Max Memory :      6158 MB
    Max Swap   :      8525 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
17
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 17
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 17: processing genes 1448 - 1538
Calculating significance of each gene.
Using projection method.
1448	BMP3	5.893945e-02
1449	BMP4	1
1450	BMP5	1
1451	BMP6	1.123271e-01
1452	BMP7	1
1453	BMP8A	1
1454	BMP8B	1
1455	BMPER	2.008598e-01
1456	BMPR1A	1
1457	BMPR1B	1
1458	BMPR2	1
1459	BMS1	9.901225e-02
1460	BMX	1
1461	BNC1	7.356033e-02
1462	BNC2	4.044841e-01
1463	BNIP1	1.295365e-01
1464	BNIP2	1
1465	BNIP3	1
1466	BNIP3L	1
1467	BNIPL	1
1468	BOC	7.525263e-02
1469	BOD1	1
1470	BOD1L	1.945204e-01
1471	BOK	1
1472	BOLA1	1
1473	BOLA3	1
1474	BOLL	1.271852e-01
1475	BPGM	1
1476	BPHL	1
1477	BPI	1
1478	BPIL1	1
1479	BPIL2	1
1480	BPIL3	1
1481	BPNT1	1
1482	BPTF	2.946985e-01
In gene BRAF the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 2231    n = 1	mu =   6.69e-08
    THCA-DJ-A13U-TP	categ 5	N = 2231    n = 1	mu =   2.35e-07
    THCA-DJ-A13V-TP	categ 5	N = 2231    n = 1	mu =   9.97e-08
    THCA-DJ-A2PN-TP	categ 5	N = 2231    n = 1	mu =   1.05e-07
    THCA-DJ-A2Q6-TP	categ 5	N = 2230    n = 1	mu =   1.70e-07
    THCA-EM-A2OX-TP	categ 5	N = 2231    n = 1	mu =   6.90e-08
    THCA-EM-A2P0-TP	categ 5	N = 2231    n = 1	mu =   1.66e-07
    THCA-EM-A3FJ-TP	categ 5	N = 2030    n = 1	mu =   3.54e-08
    THCA-ET-A2MZ-TP	categ 5	N = 2231    n = 1	mu =   1.04e-07
    THCA-ET-A2N4-TP	categ 5	N = 2231    n = 1	mu =   2.14e-07
    THCA-ET-A3BO-TP	categ 5	N = 2231    n = 1	mu =   3.49e-08
    THCA-ET-A3BP-TP	categ 5	N = 2231    n = 1	mu =   7.02e-08
    THCA-ET-A3BW-TP	categ 5	N = 2231    n = 1	mu =   6.84e-08
    THCA-ET-A3DT-TP	categ 5	N = 2231    n = 1	mu =   6.89e-08
    THCA-FE-A230-TP	categ 5	N = 2231    n = 1	mu =   3.42e-08
    THCA-FE-A233-TP	categ 5	N = 2231    n = 1	mu =   1.41e-07
    THCA-FE-A234-TP	categ 5	N = 2231    n = 1	mu =   2.44e-07
    THCA-FY-A3BL-TP	categ 5	N = 2231    n = 1	mu =   3.56e-08
    THCA-FY-A3I4-TP	categ 5	N = 2203    n = 1	mu =   1.36e-07
    THCA-GE-A2C6-TP	categ 5	N = 2080    n = 1	mu =   7.09e-08
1483	BRAF	2.109424e-15
1484	BRAP	1
1485	BRCA1	2.326953e-01
1486	BRCA2	3.757239e-01
1487	BRCC3	1
1488	BRD1	1
1489	BRD2	1
1490	BRD3	1
1491	BRD4	1
1492	BRD7	1
1493	BRD8	1
1494	BRD9	1
1495	BRDT	3.143841e-01
1496	BRE	9.372429e-02
1497	BRF1	1
1498	BRF2	1
1499	BRI3	1
1500	BRI3BP	1
1501	BRIP1	3.090237e-01
1502	BRIX1	3.136186e-03
1503	BRMS1	1
1504	BRMS1L	1
1505	BRP44	1
1506	BRP44L	1
1507	BRPF1	1
1508	BRPF3	1
1509	BRS3	1
1510	BRSK1	1.904641e-01
1511	BRSK2	1
1512	BRWD1	4.421460e-01
1513	BRWD3	1
1514	BSCL2	1
1515	BSDC1	1
1516	BSG	1
1517	BSN	7.062759e-01
1518	BSND	1
1519	BSPRY	6.174702e-02
1520	BST1	1
1521	BST2	1
1522	BSX	1
1523	BTAF1	1
1524	BTBD1	1
1525	BTBD10	1.696101e-01
1526	BTBD11	1
In gene BTBD12 the following bins exceed PROBCAP:
    THCA-ET-A2MZ-TP	categ 5	N = 5253    n = 1	mu =   1.04e-07
1527	BTBD12	3.503419e-01
1528	BTBD16	1
1529	BTBD17	1
1530	BTBD2	1
1531	BTBD3	2.128226e-01
1532	BTBD6	1
1533	BTBD7	1.013251e-01
1534	BTBD8	1
1535	BTBD9	1
1536	BTC	1
1537	BTD	1
1538	BTF3	1
Done

Running MutSig 2:
Scatter job 17: processing genes 1448 - 1538
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
BRAF
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
BRAF   10000 perm   14 sec   (693 perm/sec)   p_kst 1.000000e-04   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
BRAF   20000 perm   34 sec   (594 perm/sec)   p_kst 5.000000e-05   p_cons 5.000000e-05   p_joint 0

Joint ci ratio: 3.919869e+00	ci left: 0	ci right 1.229551e-04	k: 0	n:30000
Cons ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
BRAF   30000 perm   48 sec   (621 perm/sec)   p_kst 3.333333e-05   p_cons 3.333333e-05   p_joint 0

Joint ci ratio: 3.919902e+00	ci left: 0	ci right 9.221773e-05	k: 0	n:40000
Cons ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
BRAF   40000 perm   63 sec   (635 perm/sec)   p_kst 2.500000e-05   p_cons 2.500000e-05   p_joint 0

Joint ci ratio: 3.919922e+00	ci left: 0	ci right 7.377487e-05	k: 0	n:50000
Cons ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
BRAF   50000 perm   78 sec   (641 perm/sec)   p_kst 2.000000e-05   p_cons 2.000000e-05   p_joint 0

Joint ci ratio: 3.919935e+00	ci left: 0	ci right 6.147943e-05	k: 0	n:60000
Cons ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
BRAF   60000 perm   93 sec   (647 perm/sec)   p_kst 1.666667e-05   p_cons 1.666667e-05   p_joint 0

Joint ci ratio: 3.919944e+00	ci left: 0	ci right 5.269689e-05	k: 0	n:70000
Cons ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
BRAF   70000 perm   108 sec   (650 perm/sec)   p_kst 1.428571e-05   p_cons 1.428571e-05   p_joint 0

Joint ci ratio: 3.919951e+00	ci left: 0	ci right 4.610993e-05	k: 0	n:80000
Cons ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
BRAF   80000 perm   123 sec   (653 perm/sec)   p_kst 1.250000e-05   p_cons 1.250000e-05   p_joint 0

Joint ci ratio: 3.919956e+00	ci left: 0	ci right 4.098671e-05	k: 0	n:90000
Cons ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
BRAF   90000 perm   137 sec   (655 perm/sec)   p_kst 1.111111e-05   p_cons 1.111111e-05   p_joint 0

Joint ci ratio: 3.919961e+00	ci left: 0	ci right 3.688811e-05	k: 0	n:100000
Cons ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
BRAF   100000 perm   152 sec   (656 perm/sec)   p_kst 1.000000e-05   p_cons 1.000000e-05   p_joint 0

Joint ci ratio: 3.919964e+00	ci left: 0	ci right 3.353471e-05	k: 0	n:110000
Cons ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
BRAF   110000 perm   168 sec   (656 perm/sec)   p_kst 9.090909e-06   p_cons 9.090909e-06   p_joint 0

Joint ci ratio: 3.919967e+00	ci left: 0	ci right 3.074019e-05	k: 0	n:120000
Cons ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
BRAF   120000 perm   183 sec   (656 perm/sec)   p_kst 8.333333e-06   p_cons 8.333333e-06   p_joint 0

Joint ci ratio: 3.919970e+00	ci left: 0	ci right 2.837559e-05	k: 0	n:130000
Cons ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
BRAF   130000 perm   198 sec   (656 perm/sec)   p_kst 7.692308e-06   p_cons 7.692308e-06   p_joint 0

Joint ci ratio: 3.919972e+00	ci left: 0	ci right 2.634879e-05	k: 0	n:140000
Cons ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
BRAF   140000 perm   214 sec   (655 perm/sec)   p_kst 7.142857e-06   p_cons 7.142857e-06   p_joint 0

Joint ci ratio: 3.919974e+00	ci left: 0	ci right 2.459223e-05	k: 0	n:150000
Cons ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
BRAF   150000 perm   229 sec   (655 perm/sec)   p_kst 6.666667e-06   p_cons 6.666667e-06   p_joint 0

Joint ci ratio: 3.919976e+00	ci left: 0	ci right 2.305523e-05	k: 0	n:160000
Cons ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
BRAF   160000 perm   245 sec   (654 perm/sec)   p_kst 6.250000e-06   p_cons 6.250000e-06   p_joint 0

Joint ci ratio: 3.919977e+00	ci left: 0	ci right 2.169906e-05	k: 0	n:170000
Cons ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
BRAF   170000 perm   260 sec   (653 perm/sec)   p_kst 5.882353e-06   p_cons 5.882353e-06   p_joint 0

Joint ci ratio: 3.919978e+00	ci left: 0	ci right 2.049356e-05	k: 0	n:180000
Cons ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
BRAF   180000 perm   276 sec   (652 perm/sec)   p_kst 5.555556e-06   p_cons 5.555556e-06   p_joint 0

Joint ci ratio: 3.919979e+00	ci left: 0	ci right 1.941497e-05	k: 0	n:190000
Cons ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
BRAF   190000 perm   292 sec   (651 perm/sec)   p_kst 5.263158e-06   p_cons 5.263158e-06   p_joint 0

Joint ci ratio: 3.919980e+00	ci left: 0	ci right 1.844423e-05	k: 0	n:200000
Cons ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
BRAF   200000 perm   308 sec   (650 perm/sec)   p_kst 5.000000e-06   p_cons 5.000000e-06   p_joint 0

Joint ci ratio: 3.919981e+00	ci left: 0	ci right 1.756594e-05	k: 0	n:210000
Cons ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
BRAF   210000 perm   323 sec   (649 perm/sec)   p_kst 4.761905e-06   p_cons 4.761905e-06   p_joint 0

Joint ci ratio: 3.919982e+00	ci left: 0	ci right 1.676749e-05	k: 0	n:220000
Cons ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
BRAF   220000 perm   340 sec   (648 perm/sec)   p_kst 4.545455e-06   p_cons 4.545455e-06   p_joint 0

Joint ci ratio: 3.919983e+00	ci left: 0	ci right 1.603848e-05	k: 0	n:230000
Cons ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
BRAF   230000 perm   356 sec   (647 perm/sec)   p_kst 4.347826e-06   p_cons 4.347826e-06   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.537021e-05	k: 0	n:240000
Cons ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
BRAF   240000 perm   372 sec   (645 perm/sec)   p_kst 4.166667e-06   p_cons 4.166667e-06   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.475541e-05	k: 0	n:250000
Cons ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
BRAF   250000 perm   388 sec   (644 perm/sec)   p_kst 4.000000e-06   p_cons 4.000000e-06   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.418790e-05	k: 0	n:260000
Cons ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
BRAF   260000 perm   404 sec   (643 perm/sec)   p_kst 3.846154e-06   p_cons 3.846154e-06   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.366242e-05	k: 0	n:270000
Cons ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
BRAF   270000 perm   421 sec   (641 perm/sec)   p_kst 3.703704e-06   p_cons 3.703704e-06   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.317448e-05	k: 0	n:280000
Cons ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
BRAF   280000 perm   438 sec   (639 perm/sec)   p_kst 3.571429e-06   p_cons 3.571429e-06   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.272019e-05	k: 0	n:290000
Cons ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
BRAF   290000 perm   455 sec   (638 perm/sec)   p_kst 3.448276e-06   p_cons 3.448276e-06   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.229619e-05	k: 0	n:300000
Cons ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
BRAF   300000 perm   472 sec   (636 perm/sec)   p_kst 3.333333e-06   p_cons 3.333333e-06   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.189954e-05	k: 0	n:310000
Cons ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
BRAF   310000 perm   488 sec   (635 perm/sec)   p_kst 3.225806e-06   p_cons 3.225806e-06   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.152768e-05	k: 0	n:320000
Cons ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
BRAF   320000 perm   505 sec   (633 perm/sec)   p_kst 3.125000e-06   p_cons 3.125000e-06   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.117836e-05	k: 0	n:330000
Cons ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
BRAF   330000 perm   522 sec   (632 perm/sec)   p_kst 3.030303e-06   p_cons 3.030303e-06   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.084959e-05	k: 0	n:340000
Cons ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
BRAF   340000 perm   539 sec   (630 perm/sec)   p_kst 2.941176e-06   p_cons 2.941176e-06   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.053960e-05	k: 0	n:350000
Cons ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
BRAF   350000 perm   557 sec   (628 perm/sec)   p_kst 2.857143e-06   p_cons 2.857143e-06   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.024683e-05	k: 0	n:360000
Cons ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
BRAF   360000 perm   575 sec   (627 perm/sec)   p_kst 2.777778e-06   p_cons 2.777778e-06   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 9.969895e-06	k: 0	n:370000
Cons ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
BRAF   370000 perm   592 sec   (625 perm/sec)   p_kst 2.702703e-06   p_cons 2.702703e-06   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.707530e-06	k: 0	n:380000
Cons ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
BRAF   380000 perm   609 sec   (624 perm/sec)   p_kst 2.631579e-06   p_cons 2.631579e-06   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.458621e-06	k: 0	n:390000
Cons ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
BRAF   390000 perm   627 sec   (622 perm/sec)   p_kst 2.564103e-06   p_cons 2.564103e-06   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.222156e-06	k: 0	n:400000
Cons ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
BRAF   400000 perm   644 sec   (621 perm/sec)   p_kst 2.500000e-06   p_cons 2.500000e-06   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 8.997226e-06	k: 0	n:410000
Cons ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
BRAF   410000 perm   662 sec   (619 perm/sec)   p_kst 2.439024e-06   p_cons 2.439024e-06   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.783008e-06	k: 0	n:420000
Cons ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
BRAF   420000 perm   680 sec   (618 perm/sec)   p_kst 2.380952e-06   p_cons 2.380952e-06   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.578753e-06	k: 0	n:430000
Cons ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
BRAF   430000 perm   698 sec   (616 perm/sec)   p_kst 2.325581e-06   p_cons 2.325581e-06   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.383782e-06	k: 0	n:440000
Cons ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
BRAF   440000 perm   716 sec   (615 perm/sec)   p_kst 2.272727e-06   p_cons 2.272727e-06   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.197476e-06	k: 0	n:450000
Cons ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
BRAF   450000 perm   734 sec   (613 perm/sec)   p_kst 2.222222e-06   p_cons 2.222222e-06   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.019271e-06	k: 0	n:460000
Cons ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
BRAF   460000 perm   751 sec   (612 perm/sec)   p_kst 2.173913e-06   p_cons 2.173913e-06   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.848649e-06	k: 0	n:470000
Cons ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
BRAF   470000 perm   770 sec   (610 perm/sec)   p_kst 2.127660e-06   p_cons 2.127660e-06   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.685136e-06	k: 0	n:480000
Cons ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
BRAF   480000 perm   788 sec   (609 perm/sec)   p_kst 2.083333e-06   p_cons 2.083333e-06   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.528297e-06	k: 0	n:490000
Cons ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
BRAF   490000 perm   806 sec   (608 perm/sec)   p_kst 2.040816e-06   p_cons 2.040816e-06   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.377732e-06	k: 0	n:500000
Cons ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
BRAF   500000 perm   825 sec   (606 perm/sec)   p_kst 2.000000e-06   p_cons 2.000000e-06   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.233071e-06	k: 0	n:510000
Cons ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
BRAF   510000 perm   844 sec   (605 perm/sec)   p_kst 1.960784e-06   p_cons 1.960784e-06   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.093974e-06	k: 0	n:520000
Cons ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
BRAF   520000 perm   863 sec   (603 perm/sec)   p_kst 1.923077e-06   p_cons 1.923077e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.960126e-06	k: 0	n:530000
Cons ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
BRAF   530000 perm   882 sec   (601 perm/sec)   p_kst 1.886792e-06   p_cons 1.886792e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.831235e-06	k: 0	n:540000
Cons ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
BRAF   540000 perm   901 sec   (599 perm/sec)   p_kst 1.851852e-06   p_cons 1.851852e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.707031e-06	k: 0	n:550000
Cons ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
BRAF   550000 perm   920 sec   (598 perm/sec)   p_kst 1.818182e-06   p_cons 1.818182e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.587263e-06	k: 0	n:560000
Cons ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
BRAF   560000 perm   939 sec   (596 perm/sec)   p_kst 1.785714e-06   p_cons 1.785714e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.471697e-06	k: 0	n:570000
Cons ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
BRAF   570000 perm   958 sec   (595 perm/sec)   p_kst 1.754386e-06   p_cons 1.754386e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.360117e-06	k: 0	n:580000
Cons ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
BRAF   580000 perm   978 sec   (593 perm/sec)   p_kst 1.724138e-06   p_cons 1.724138e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.252319e-06	k: 0	n:590000
Cons ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
BRAF   590000 perm   997 sec   (592 perm/sec)   p_kst 1.694915e-06   p_cons 1.694915e-06   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.148114e-06	k: 0	n:600000
Cons ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
BRAF   600000 perm   1016 sec   (591 perm/sec)   p_kst 1.666667e-06   p_cons 1.666667e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 6.047325e-06	k: 0	n:610000
Cons ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
BRAF   610000 perm   1036 sec   (589 perm/sec)   p_kst 1.639344e-06   p_cons 1.639344e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.949788e-06	k: 0	n:620000
Cons ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
BRAF   620000 perm   1055 sec   (588 perm/sec)   p_kst 1.612903e-06   p_cons 1.612903e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.855347e-06	k: 0	n:630000
Cons ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
BRAF   630000 perm   1075 sec   (586 perm/sec)   p_kst 1.587302e-06   p_cons 1.587302e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.763858e-06	k: 0	n:640000
Cons ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
BRAF   640000 perm   1094 sec   (585 perm/sec)   p_kst 1.562500e-06   p_cons 1.562500e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.675183e-06	k: 0	n:650000
Cons ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
BRAF   650000 perm   1113 sec   (584 perm/sec)   p_kst 1.538462e-06   p_cons 1.538462e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.589196e-06	k: 0	n:660000
Cons ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
BRAF   660000 perm   1133 sec   (583 perm/sec)   p_kst 1.515152e-06   p_cons 1.515152e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.505775e-06	k: 0	n:670000
Cons ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
BRAF   670000 perm   1153 sec   (581 perm/sec)   p_kst 1.492537e-06   p_cons 1.492537e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.424808e-06	k: 0	n:680000
Cons ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
BRAF   680000 perm   1172 sec   (580 perm/sec)   p_kst 1.470588e-06   p_cons 1.470588e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.346188e-06	k: 0	n:690000
Cons ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
BRAF   690000 perm   1192 sec   (579 perm/sec)   p_kst 1.449275e-06   p_cons 1.449275e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.269814e-06	k: 0	n:700000
Cons ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
BRAF   700000 perm   1212 sec   (577 perm/sec)   p_kst 1.428571e-06   p_cons 1.428571e-06   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.195591e-06	k: 0	n:710000
Cons ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
BRAF   710000 perm   1232 sec   (576 perm/sec)   p_kst 1.408451e-06   p_cons 1.408451e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.123431e-06	k: 0	n:720000
Cons ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
BRAF   720000 perm   1252 sec   (575 perm/sec)   p_kst 1.388889e-06   p_cons 1.388889e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.053247e-06	k: 0	n:730000
Cons ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
BRAF   730000 perm   1272 sec   (574 perm/sec)   p_kst 1.369863e-06   p_cons 1.369863e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.984960e-06	k: 0	n:740000
Cons ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
BRAF   740000 perm   1293 sec   (572 perm/sec)   p_kst 1.351351e-06   p_cons 1.351351e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.918494e-06	k: 0	n:750000
Cons ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
BRAF   750000 perm   1313 sec   (571 perm/sec)   p_kst 1.333333e-06   p_cons 1.333333e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.853777e-06	k: 0	n:760000
Cons ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
BRAF   760000 perm   1335 sec   (569 perm/sec)   p_kst 1.315789e-06   p_cons 1.315789e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.790741e-06	k: 0	n:770000
Cons ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
KS ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
BRAF   770000 perm   1357 sec   (567 perm/sec)   p_kst 1.298701e-06   p_cons 1.298701e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.729321e-06	k: 0	n:780000
Cons ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
KS ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
BRAF   780000 perm   1378 sec   (566 perm/sec)   p_kst 1.282051e-06   p_cons 1.282051e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.669457e-06	k: 0	n:790000
Cons ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
KS ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
BRAF   790000 perm   1399 sec   (565 perm/sec)   p_kst 1.265823e-06   p_cons 1.265823e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.611089e-06	k: 0	n:800000
Cons ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
KS ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
BRAF   800000 perm   1421 sec   (563 perm/sec)   p_kst 1.250000e-06   p_cons 1.250000e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.554162e-06	k: 0	n:810000
Cons ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
KS ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
BRAF   810000 perm   1442 sec   (562 perm/sec)   p_kst 1.234568e-06   p_cons 1.234568e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.498623e-06	k: 0	n:820000
Cons ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
KS ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
BRAF   820000 perm   1463 sec   (561 perm/sec)   p_kst 1.219512e-06   p_cons 1.219512e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.444423e-06	k: 0	n:830000
Cons ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
KS ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
BRAF   830000 perm   1484 sec   (559 perm/sec)   p_kst 1.204819e-06   p_cons 1.204819e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.391514e-06	k: 0	n:840000
Cons ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
KS ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
BRAF   840000 perm   1505 sec   (558 perm/sec)   p_kst 1.190476e-06   p_cons 1.190476e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.339849e-06	k: 0	n:850000
Cons ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
KS ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
BRAF   850000 perm   1527 sec   (557 perm/sec)   p_kst 1.176471e-06   p_cons 1.176471e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.289386e-06	k: 0	n:860000
Cons ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
KS ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
BRAF   860000 perm   1549 sec   (555 perm/sec)   p_kst 1.162791e-06   p_cons 1.162791e-06   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.240082e-06	k: 0	n:870000
Cons ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
KS ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
BRAF   870000 perm   1570 sec   (554 perm/sec)   p_kst 1.149425e-06   p_cons 1.149425e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.191900e-06	k: 0	n:880000
Cons ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
KS ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
BRAF   880000 perm   1593 sec   (553 perm/sec)   p_kst 1.136364e-06   p_cons 1.136364e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.144800e-06	k: 0	n:890000
Cons ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
KS ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
BRAF   890000 perm   1614 sec   (551 perm/sec)   p_kst 1.123596e-06   p_cons 1.123596e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.098747e-06	k: 0	n:900000
Cons ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
KS ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
BRAF   900000 perm   1636 sec   (550 perm/sec)   p_kst 1.111111e-06   p_cons 1.111111e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.053705e-06	k: 0	n:910000
Cons ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
KS ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
BRAF   910000 perm   1657 sec   (549 perm/sec)   p_kst 1.098901e-06   p_cons 1.098901e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.009644e-06	k: 0	n:920000
Cons ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
KS ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
BRAF   920000 perm   1679 sec   (548 perm/sec)   p_kst 1.086957e-06   p_cons 1.086957e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.966529e-06	k: 0	n:930000
Cons ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
KS ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
BRAF   930000 perm   1701 sec   (547 perm/sec)   p_kst 1.075269e-06   p_cons 1.075269e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.924332e-06	k: 0	n:940000
Cons ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
KS ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
BRAF   940000 perm   1723 sec   (546 perm/sec)   p_kst 1.063830e-06   p_cons 1.063830e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.883023e-06	k: 0	n:950000
Cons ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
KS ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
BRAF   950000 perm   1745 sec   (544 perm/sec)   p_kst 1.052632e-06   p_cons 1.052632e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.842575e-06	k: 0	n:960000
Cons ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
KS ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
BRAF   960000 perm   1767 sec   (543 perm/sec)   p_kst 1.041667e-06   p_cons 1.041667e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.802961e-06	k: 0	n:970000
Cons ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
KS ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
BRAF   970000 perm   1791 sec   (542 perm/sec)   p_kst 1.030928e-06   p_cons 1.030928e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.764156e-06	k: 0	n:980000
Cons ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
KS ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
BRAF   980000 perm   1814 sec   (540 perm/sec)   p_kst 1.020408e-06   p_cons 1.020408e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.726134e-06	k: 0	n:990000
Cons ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
KS ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
BRAF   990000 perm   1836 sec   (539 perm/sec)   p_kst 1.010101e-06   p_cons 1.010101e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.688873e-06	k: 0	n:1000000
Cons ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
BRAF   1000000 perm   1860 sec   (538 perm/sec)   p_kst 1.000000e-06   p_cons 1.000000e-06   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.652349e-06	k: 0	n:1010000
Cons ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
BRAF   1010000 perm   1883 sec   (536 perm/sec)   p_kst 9.900990e-07   p_cons 9.900990e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.616542e-06	k: 0	n:1020000
Cons ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
BRAF   1020000 perm   1906 sec   (535 perm/sec)   p_kst 9.803922e-07   p_cons 9.803922e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.581430e-06	k: 0	n:1030000
Cons ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
BRAF   1030000 perm   1929 sec   (534 perm/sec)   p_kst 9.708738e-07   p_cons 9.708738e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.546993e-06	k: 0	n:1040000
Cons ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
BRAF   1040000 perm   1952 sec   (533 perm/sec)   p_kst 9.615385e-07   p_cons 9.615385e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.513212e-06	k: 0	n:1050000
Cons ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
BRAF   1050000 perm   1975 sec   (532 perm/sec)   p_kst 9.523810e-07   p_cons 9.523810e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.480069e-06	k: 0	n:1060000
Cons ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
BRAF   1060000 perm   1999 sec   (530 perm/sec)   p_kst 9.433962e-07   p_cons 9.433962e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.447545e-06	k: 0	n:1070000
Cons ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
BRAF   1070000 perm   2022 sec   (529 perm/sec)   p_kst 9.345794e-07   p_cons 9.345794e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.415623e-06	k: 0	n:1080000
Cons ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
BRAF   1080000 perm   2046 sec   (528 perm/sec)   p_kst 9.259259e-07   p_cons 9.259259e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.384287e-06	k: 0	n:1090000
Cons ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
BRAF   1090000 perm   2070 sec   (527 perm/sec)   p_kst 9.174312e-07   p_cons 9.174312e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.353521e-06	k: 0	n:1100000
Cons ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
BRAF   1100000 perm   2094 sec   (525 perm/sec)   p_kst 9.090909e-07   p_cons 9.090909e-07   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.323309e-06	k: 0	n:1110000
Cons ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
BRAF   1110000 perm   2119 sec   (524 perm/sec)   p_kst 9.009009e-07   p_cons 9.009009e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.293637e-06	k: 0	n:1120000
Cons ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
BRAF   1120000 perm   2143 sec   (523 perm/sec)   p_kst 8.928571e-07   p_cons 8.928571e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.264490e-06	k: 0	n:1130000
Cons ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
BRAF   1130000 perm   2167 sec   (521 perm/sec)   p_kst 8.849558e-07   p_cons 8.849558e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.235854e-06	k: 0	n:1140000
Cons ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
BRAF   1140000 perm   2191 sec   (520 perm/sec)   p_kst 8.771930e-07   p_cons 8.771930e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.207716e-06	k: 0	n:1150000
Cons ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
BRAF   1150000 perm   2217 sec   (519 perm/sec)   p_kst 8.695652e-07   p_cons 8.695652e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.180063e-06	k: 0	n:1160000
Cons ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
BRAF   1160000 perm   2242 sec   (517 perm/sec)   p_kst 8.620690e-07   p_cons 8.620690e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.152883e-06	k: 0	n:1170000
Cons ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
BRAF   1170000 perm   2267 sec   (516 perm/sec)   p_kst 8.547009e-07   p_cons 8.547009e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.126164e-06	k: 0	n:1180000
Cons ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
BRAF   1180000 perm   2291 sec   (515 perm/sec)   p_kst 8.474576e-07   p_cons 8.474576e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.099894e-06	k: 0	n:1190000
Cons ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
BRAF   1190000 perm   2316 sec   (514 perm/sec)   p_kst 8.403361e-07   p_cons 8.403361e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.074061e-06	k: 0	n:1200000
Cons ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
BRAF   1200000 perm   2340 sec   (513 perm/sec)   p_kst 8.333333e-07   p_cons 8.333333e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.048656e-06	k: 0	n:1210000
Cons ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
BRAF   1210000 perm   2365 sec   (512 perm/sec)   p_kst 8.264463e-07   p_cons 8.264463e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.023667e-06	k: 0	n:1220000
Cons ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
BRAF   1220000 perm   2389 sec   (511 perm/sec)   p_kst 8.196721e-07   p_cons 8.196721e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.999084e-06	k: 0	n:1230000
Cons ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
BRAF   1230000 perm   2415 sec   (509 perm/sec)   p_kst 8.130081e-07   p_cons 8.130081e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.974898e-06	k: 0	n:1240000
Cons ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
BRAF   1240000 perm   2439 sec   (508 perm/sec)   p_kst 8.064516e-07   p_cons 8.064516e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.951099e-06	k: 0	n:1250000
Cons ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
BRAF   1250000 perm   2464 sec   (507 perm/sec)   p_kst 8.000000e-07   p_cons 8.000000e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.927678e-06	k: 0	n:1260000
Cons ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
BRAF   1260000 perm   2489 sec   (506 perm/sec)   p_kst 7.936508e-07   p_cons 7.936508e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.904625e-06	k: 0	n:1270000
Cons ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
BRAF   1270000 perm   2514 sec   (505 perm/sec)   p_kst 7.874016e-07   p_cons 7.874016e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.881933e-06	k: 0	n:1280000
Cons ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
BRAF   1280000 perm   2539 sec   (504 perm/sec)   p_kst 7.812500e-07   p_cons 7.812500e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.859592e-06	k: 0	n:1290000
Cons ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
BRAF   1290000 perm   2564 sec   (503 perm/sec)   p_kst 7.751938e-07   p_cons 7.751938e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.837596e-06	k: 0	n:1300000
Cons ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
BRAF   1300000 perm   2589 sec   (502 perm/sec)   p_kst 7.692308e-07   p_cons 7.692308e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.815935e-06	k: 0	n:1310000
Cons ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
BRAF   1310000 perm   2615 sec   (501 perm/sec)   p_kst 7.633588e-07   p_cons 7.633588e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.794602e-06	k: 0	n:1320000
Cons ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
BRAF   1320000 perm   2647 sec   (499 perm/sec)   p_kst 7.575758e-07   p_cons 7.575758e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.773590e-06	k: 0	n:1330000
Cons ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
BRAF   1330000 perm   2673 sec   (497 perm/sec)   p_kst 7.518797e-07   p_cons 7.518797e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.752891e-06	k: 0	n:1340000
Cons ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
BRAF   1340000 perm   2699 sec   (496 perm/sec)   p_kst 7.462687e-07   p_cons 7.462687e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.732500e-06	k: 0	n:1350000
Cons ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
BRAF   1350000 perm   2725 sec   (495 perm/sec)   p_kst 7.407407e-07   p_cons 7.407407e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.712408e-06	k: 0	n:1360000
Cons ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
BRAF   1360000 perm   2751 sec   (494 perm/sec)   p_kst 7.352941e-07   p_cons 7.352941e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.692609e-06	k: 0	n:1370000
Cons ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
BRAF   1370000 perm   2778 sec   (493 perm/sec)   p_kst 7.299270e-07   p_cons 7.299270e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.673097e-06	k: 0	n:1380000
Cons ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
BRAF   1380000 perm   2803 sec   (492 perm/sec)   p_kst 7.246377e-07   p_cons 7.246377e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.653867e-06	k: 0	n:1390000
Cons ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
BRAF   1390000 perm   2829 sec   (491 perm/sec)   p_kst 7.194245e-07   p_cons 7.194245e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.634910e-06	k: 0	n:1400000
Cons ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
BRAF   1400000 perm   2856 sec   (490 perm/sec)   p_kst 7.142857e-07   p_cons 7.142857e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.616223e-06	k: 0	n:1410000
Cons ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
BRAF   1410000 perm   2883 sec   (489 perm/sec)   p_kst 7.092199e-07   p_cons 7.092199e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.597799e-06	k: 0	n:1420000
Cons ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
BRAF   1420000 perm   2909 sec   (488 perm/sec)   p_kst 7.042254e-07   p_cons 7.042254e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.579633e-06	k: 0	n:1430000
Cons ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
BRAF   1430000 perm   2938 sec   (487 perm/sec)   p_kst 6.993007e-07   p_cons 6.993007e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.561719e-06	k: 0	n:1440000
Cons ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
BRAF   1440000 perm   2964 sec   (486 perm/sec)   p_kst 6.944444e-07   p_cons 6.944444e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.544052e-06	k: 0	n:1450000
Cons ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
BRAF   1450000 perm   2991 sec   (485 perm/sec)   p_kst 6.896552e-07   p_cons 6.896552e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.526627e-06	k: 0	n:1460000
Cons ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
BRAF   1460000 perm   3018 sec   (484 perm/sec)   p_kst 6.849315e-07   p_cons 6.849315e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.509439e-06	k: 0	n:1470000
Cons ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
BRAF   1470000 perm   3044 sec   (483 perm/sec)   p_kst 6.802721e-07   p_cons 6.802721e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.492483e-06	k: 0	n:1480000
Cons ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
BRAF   1480000 perm   3071 sec   (482 perm/sec)   p_kst 6.756757e-07   p_cons 6.756757e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.475755e-06	k: 0	n:1490000
Cons ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
BRAF   1490000 perm   3098 sec   (481 perm/sec)   p_kst 6.711409e-07   p_cons 6.711409e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.459250e-06	k: 0	n:1500000
Cons ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
BRAF   1500000 perm   3127 sec   (480 perm/sec)   p_kst 6.666667e-07   p_cons 6.666667e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.442964e-06	k: 0	n:1510000
Cons ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
BRAF   1510000 perm   3154 sec   (479 perm/sec)   p_kst 6.622517e-07   p_cons 6.622517e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.426891e-06	k: 0	n:1520000
Cons ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
BRAF   1520000 perm   3185 sec   (477 perm/sec)   p_kst 6.578947e-07   p_cons 6.578947e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.411029e-06	k: 0	n:1530000
Cons ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
BRAF   1530000 perm   3212 sec   (476 perm/sec)   p_kst 6.535948e-07   p_cons 6.535948e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.395373e-06	k: 0	n:1540000
Cons ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
BRAF   1540000 perm   3240 sec   (475 perm/sec)   p_kst 6.493506e-07   p_cons 6.493506e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.379919e-06	k: 0	n:1550000
Cons ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
BRAF   1550000 perm   3268 sec   (474 perm/sec)   p_kst 6.451613e-07   p_cons 6.451613e-07   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.364664e-06	k: 0	n:1560000
Cons ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
BRAF   1560000 perm   3299 sec   (473 perm/sec)   p_kst 6.410256e-07   p_cons 6.410256e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.349602e-06	k: 0	n:1570000
Cons ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
BRAF   1570000 perm   3327 sec   (472 perm/sec)   p_kst 6.369427e-07   p_cons 6.369427e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.334731e-06	k: 0	n:1580000
Cons ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
BRAF   1580000 perm   3355 sec   (471 perm/sec)   p_kst 6.329114e-07   p_cons 6.329114e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.320047e-06	k: 0	n:1590000
Cons ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
BRAF   1590000 perm   3383 sec   (470 perm/sec)   p_kst 6.289308e-07   p_cons 6.289308e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.305547e-06	k: 0	n:1600000
Cons ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
BRAF   1600000 perm   3411 sec   (469 perm/sec)   p_kst 6.250000e-07   p_cons 6.250000e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.291227e-06	k: 0	n:1610000
Cons ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
BRAF   1610000 perm   3439 sec   (468 perm/sec)   p_kst 6.211180e-07   p_cons 6.211180e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.277083e-06	k: 0	n:1620000
Cons ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
BRAF   1620000 perm   3467 sec   (467 perm/sec)   p_kst 6.172840e-07   p_cons 6.172840e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.263114e-06	k: 0	n:1630000
Cons ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
BRAF   1630000 perm   3495 sec   (466 perm/sec)   p_kst 6.134969e-07   p_cons 6.134969e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.249314e-06	k: 0	n:1640000
Cons ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
BRAF   1640000 perm   3523 sec   (465 perm/sec)   p_kst 6.097561e-07   p_cons 6.097561e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.235682e-06	k: 0	n:1650000
Cons ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
BRAF   1650000 perm   3552 sec   (465 perm/sec)   p_kst 6.060606e-07   p_cons 6.060606e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.222214e-06	k: 0	n:1660000
Cons ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
BRAF   1660000 perm   3581 sec   (464 perm/sec)   p_kst 6.024096e-07   p_cons 6.024096e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.208907e-06	k: 0	n:1670000
Cons ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
BRAF   1670000 perm   3609 sec   (463 perm/sec)   p_kst 5.988024e-07   p_cons 5.988024e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.195759e-06	k: 0	n:1680000
Cons ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
BRAF   1680000 perm   3638 sec   (462 perm/sec)   p_kst 5.952381e-07   p_cons 5.952381e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.182767e-06	k: 0	n:1690000
Cons ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
BRAF   1690000 perm   3667 sec   (461 perm/sec)   p_kst 5.917160e-07   p_cons 5.917160e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.169927e-06	k: 0	n:1700000
Cons ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
BRAF   1700000 perm   3695 sec   (460 perm/sec)   p_kst 5.882353e-07   p_cons 5.882353e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.157237e-06	k: 0	n:1710000
Cons ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
BRAF   1710000 perm   3725 sec   (459 perm/sec)   p_kst 5.847953e-07   p_cons 5.847953e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.144695e-06	k: 0	n:1720000
Cons ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
BRAF   1720000 perm   3754 sec   (458 perm/sec)   p_kst 5.813953e-07   p_cons 5.813953e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.132298e-06	k: 0	n:1730000
Cons ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
BRAF   1730000 perm   3783 sec   (457 perm/sec)   p_kst 5.780347e-07   p_cons 5.780347e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.120043e-06	k: 0	n:1740000
Cons ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
BRAF   1740000 perm   3812 sec   (456 perm/sec)   p_kst 5.747126e-07   p_cons 5.747126e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.107929e-06	k: 0	n:1750000
Cons ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
BRAF   1750000 perm   3841 sec   (456 perm/sec)   p_kst 5.714286e-07   p_cons 5.714286e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.095952e-06	k: 0	n:1760000
Cons ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
BRAF   1760000 perm   3871 sec   (455 perm/sec)   p_kst 5.681818e-07   p_cons 5.681818e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.084111e-06	k: 0	n:1770000
Cons ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
BRAF   1770000 perm   3900 sec   (454 perm/sec)   p_kst 5.649718e-07   p_cons 5.649718e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.072402e-06	k: 0	n:1780000
Cons ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
BRAF   1780000 perm   3930 sec   (453 perm/sec)   p_kst 5.617978e-07   p_cons 5.617978e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.060824e-06	k: 0	n:1790000
Cons ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
BRAF   1790000 perm   3960 sec   (452 perm/sec)   p_kst 5.586592e-07   p_cons 5.586592e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.049375e-06	k: 0	n:1800000
Cons ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
BRAF   1800000 perm   3989 sec   (451 perm/sec)   p_kst 5.555556e-07   p_cons 5.555556e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.038053e-06	k: 0	n:1810000
Cons ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
BRAF   1810000 perm   4020 sec   (450 perm/sec)   p_kst 5.524862e-07   p_cons 5.524862e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.026855e-06	k: 0	n:1820000
Cons ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
BRAF   1820000 perm   4050 sec   (449 perm/sec)   p_kst 5.494505e-07   p_cons 5.494505e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.015779e-06	k: 0	n:1830000
Cons ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
BRAF   1830000 perm   4080 sec   (449 perm/sec)   p_kst 5.464481e-07   p_cons 5.464481e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.004824e-06	k: 0	n:1840000
Cons ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
BRAF   1840000 perm   4110 sec   (448 perm/sec)   p_kst 5.434783e-07   p_cons 5.434783e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.993987e-06	k: 0	n:1850000
Cons ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
BRAF   1850000 perm   4139 sec   (447 perm/sec)   p_kst 5.405405e-07   p_cons 5.405405e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.983267e-06	k: 0	n:1860000
Cons ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
BRAF   1860000 perm   4169 sec   (446 perm/sec)   p_kst 5.376344e-07   p_cons 5.376344e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.972661e-06	k: 0	n:1870000
Cons ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
BRAF   1870000 perm   4199 sec   (445 perm/sec)   p_kst 5.347594e-07   p_cons 5.347594e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.962168e-06	k: 0	n:1880000
Cons ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
BRAF   1880000 perm   4230 sec   (444 perm/sec)   p_kst 5.319149e-07   p_cons 5.319149e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.951786e-06	k: 0	n:1890000
Cons ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
BRAF   1890000 perm   4260 sec   (444 perm/sec)   p_kst 5.291005e-07   p_cons 5.291005e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.941514e-06	k: 0	n:1900000
Cons ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
BRAF   1900000 perm   4290 sec   (443 perm/sec)   p_kst 5.263158e-07   p_cons 5.263158e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.931349e-06	k: 0	n:1910000
Cons ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
BRAF   1910000 perm   4320 sec   (442 perm/sec)   p_kst 5.235602e-07   p_cons 5.235602e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.921290e-06	k: 0	n:1920000
Cons ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
BRAF   1920000 perm   4350 sec   (441 perm/sec)   p_kst 5.208333e-07   p_cons 5.208333e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.911335e-06	k: 0	n:1930000
Cons ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
BRAF   1930000 perm   4381 sec   (441 perm/sec)   p_kst 5.181347e-07   p_cons 5.181347e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.901482e-06	k: 0	n:1940000
Cons ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
BRAF   1940000 perm   4411 sec   (440 perm/sec)   p_kst 5.154639e-07   p_cons 5.154639e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.891731e-06	k: 0	n:1950000
Cons ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
BRAF   1950000 perm   4442 sec   (439 perm/sec)   p_kst 5.128205e-07   p_cons 5.128205e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.882080e-06	k: 0	n:1960000
Cons ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
BRAF   1960000 perm   4473 sec   (438 perm/sec)   p_kst 5.102041e-07   p_cons 5.102041e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.872526e-06	k: 0	n:1970000
Cons ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
BRAF   1970000 perm   4504 sec   (437 perm/sec)   p_kst 5.076142e-07   p_cons 5.076142e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.863069e-06	k: 0	n:1980000
Cons ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
BRAF   1980000 perm   4535 sec   (437 perm/sec)   p_kst 5.050505e-07   p_cons 5.050505e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.853707e-06	k: 0	n:1990000
Cons ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
BRAF   1990000 perm   4567 sec   (436 perm/sec)   p_kst 5.025126e-07   p_cons 5.025126e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.844438e-06	k: 0	n:2000000
Cons ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
BRAF   2000000 perm   4598 sec   (435 perm/sec)   p_kst 5.000000e-07   p_cons 5.000000e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.835262e-06	k: 0	n:2010000
Cons ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
BRAF   2010000 perm   4630 sec   (434 perm/sec)   p_kst 4.975124e-07   p_cons 4.975124e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.826176e-06	k: 0	n:2020000
Cons ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
BRAF   2020000 perm   4663 sec   (433 perm/sec)   p_kst 4.950495e-07   p_cons 4.950495e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.817180e-06	k: 0	n:2030000
Cons ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
BRAF   2030000 perm   4696 sec   (432 perm/sec)   p_kst 4.926108e-07   p_cons 4.926108e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.808273e-06	k: 0	n:2040000
Cons ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
BRAF   2040000 perm   4727 sec   (432 perm/sec)   p_kst 4.901961e-07   p_cons 4.901961e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.799452e-06	k: 0	n:2050000
Cons ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
BRAF   2050000 perm   4758 sec   (431 perm/sec)   p_kst 4.878049e-07   p_cons 4.878049e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.790717e-06	k: 0	n:2060000
Cons ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
BRAF   2060000 perm   4790 sec   (430 perm/sec)   p_kst 4.854369e-07   p_cons 4.854369e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.782066e-06	k: 0	n:2070000
Cons ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
BRAF   2070000 perm   4822 sec   (429 perm/sec)   p_kst 4.830918e-07   p_cons 4.830918e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.773498e-06	k: 0	n:2080000
Cons ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
BRAF   2080000 perm   4853 sec   (429 perm/sec)   p_kst 4.807692e-07   p_cons 4.807692e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.765013e-06	k: 0	n:2090000
Cons ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
BRAF   2090000 perm   4886 sec   (428 perm/sec)   p_kst 4.784689e-07   p_cons 4.784689e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.756608e-06	k: 0	n:2100000
Cons ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
BRAF   2100000 perm   4918 sec   (427 perm/sec)   p_kst 4.761905e-07   p_cons 4.761905e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.748283e-06	k: 0	n:2110000
Cons ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
BRAF   2110000 perm   4951 sec   (426 perm/sec)   p_kst 4.739336e-07   p_cons 4.739336e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.740036e-06	k: 0	n:2120000
Cons ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
BRAF   2120000 perm   4983 sec   (425 perm/sec)   p_kst 4.716981e-07   p_cons 4.716981e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.731867e-06	k: 0	n:2130000
Cons ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
BRAF   2130000 perm   5016 sec   (425 perm/sec)   p_kst 4.694836e-07   p_cons 4.694836e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.723774e-06	k: 0	n:2140000
Cons ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
BRAF   2140000 perm   5048 sec   (424 perm/sec)   p_kst 4.672897e-07   p_cons 4.672897e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.715756e-06	k: 0	n:2150000
Cons ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
BRAF   2150000 perm   5081 sec   (423 perm/sec)   p_kst 4.651163e-07   p_cons 4.651163e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.707813e-06	k: 0	n:2160000
Cons ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
BRAF   2160000 perm   5113 sec   (422 perm/sec)   p_kst 4.629630e-07   p_cons 4.629630e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.699943e-06	k: 0	n:2170000
Cons ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
BRAF   2170000 perm   5146 sec   (422 perm/sec)   p_kst 4.608295e-07   p_cons 4.608295e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.692145e-06	k: 0	n:2180000
Cons ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
BRAF   2180000 perm   5179 sec   (421 perm/sec)   p_kst 4.587156e-07   p_cons 4.587156e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.684418e-06	k: 0	n:2190000
Cons ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
BRAF   2190000 perm   5211 sec   (420 perm/sec)   p_kst 4.566210e-07   p_cons 4.566210e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.676762e-06	k: 0	n:2200000
Cons ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
BRAF   2200000 perm   5244 sec   (420 perm/sec)   p_kst 4.545455e-07   p_cons 4.545455e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.669175e-06	k: 0	n:2210000
Cons ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
BRAF   2210000 perm   5277 sec   (419 perm/sec)   p_kst 4.524887e-07   p_cons 4.524887e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.661656e-06	k: 0	n:2220000
Cons ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
BRAF   2220000 perm   5310 sec   (418 perm/sec)   p_kst 4.504505e-07   p_cons 4.504505e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.654205e-06	k: 0	n:2230000
Cons ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
BRAF   2230000 perm   5343 sec   (417 perm/sec)   p_kst 4.484305e-07   p_cons 4.484305e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.646820e-06	k: 0	n:2240000
Cons ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
BRAF   2240000 perm   5377 sec   (417 perm/sec)   p_kst 4.464286e-07   p_cons 4.464286e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.639501e-06	k: 0	n:2250000
Cons ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
BRAF   2250000 perm   5411 sec   (416 perm/sec)   p_kst 4.444444e-07   p_cons 4.444444e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.632246e-06	k: 0	n:2260000
Cons ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
BRAF   2260000 perm   5445 sec   (415 perm/sec)   p_kst 4.424779e-07   p_cons 4.424779e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.625056e-06	k: 0	n:2270000
Cons ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
BRAF   2270000 perm   5479 sec   (414 perm/sec)   p_kst 4.405286e-07   p_cons 4.405286e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.617928e-06	k: 0	n:2280000
Cons ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
BRAF   2280000 perm   5513 sec   (414 perm/sec)   p_kst 4.385965e-07   p_cons 4.385965e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.610863e-06	k: 0	n:2290000
Cons ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
BRAF   2290000 perm   5546 sec   (413 perm/sec)   p_kst 4.366812e-07   p_cons 4.366812e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.603859e-06	k: 0	n:2300000
Cons ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
BRAF   2300000 perm   5580 sec   (412 perm/sec)   p_kst 4.347826e-07   p_cons 4.347826e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.596916e-06	k: 0	n:2310000
Cons ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
BRAF   2310000 perm   5614 sec   (411 perm/sec)   p_kst 4.329004e-07   p_cons 4.329004e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.590033e-06	k: 0	n:2320000
Cons ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
BRAF   2320000 perm   5648 sec   (411 perm/sec)   p_kst 4.310345e-07   p_cons 4.310345e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.583209e-06	k: 0	n:2330000
Cons ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
BRAF   2330000 perm   5682 sec   (410 perm/sec)   p_kst 4.291845e-07   p_cons 4.291845e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.576443e-06	k: 0	n:2340000
Cons ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
BRAF   2340000 perm   5716 sec   (409 perm/sec)   p_kst 4.273504e-07   p_cons 4.273504e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.569735e-06	k: 0	n:2350000
Cons ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
BRAF   2350000 perm   5750 sec   (409 perm/sec)   p_kst 4.255319e-07   p_cons 4.255319e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.563083e-06	k: 0	n:2360000
Cons ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
BRAF   2360000 perm   5784 sec   (408 perm/sec)   p_kst 4.237288e-07   p_cons 4.237288e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.556488e-06	k: 0	n:2370000
Cons ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
BRAF   2370000 perm   5818 sec   (407 perm/sec)   p_kst 4.219409e-07   p_cons 4.219409e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.549948e-06	k: 0	n:2380000
Cons ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
BRAF   2380000 perm   5853 sec   (407 perm/sec)   p_kst 4.201681e-07   p_cons 4.201681e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.543463e-06	k: 0	n:2390000
Cons ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
BRAF   2390000 perm   5887 sec   (406 perm/sec)   p_kst 4.184100e-07   p_cons 4.184100e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.537032e-06	k: 0	n:2400000
Cons ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
BRAF   2400000 perm   5922 sec   (405 perm/sec)   p_kst 4.166667e-07   p_cons 4.166667e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.530654e-06	k: 0	n:2410000
Cons ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
BRAF   2410000 perm   5957 sec   (405 perm/sec)   p_kst 4.149378e-07   p_cons 4.149378e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.524329e-06	k: 0	n:2420000
Cons ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
BRAF   2420000 perm   5992 sec   (404 perm/sec)   p_kst 4.132231e-07   p_cons 4.132231e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.518056e-06	k: 0	n:2430000
Cons ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
BRAF   2430000 perm   6026 sec   (403 perm/sec)   p_kst 4.115226e-07   p_cons 4.115226e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.511835e-06	k: 0	n:2440000
Cons ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
BRAF   2440000 perm   6061 sec   (403 perm/sec)   p_kst 4.098361e-07   p_cons 4.098361e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.505664e-06	k: 0	n:2450000
Cons ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
BRAF   2450000 perm   6096 sec   (402 perm/sec)   p_kst 4.081633e-07   p_cons 4.081633e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.499543e-06	k: 0	n:2460000
Cons ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
BRAF   2460000 perm   6131 sec   (401 perm/sec)   p_kst 4.065041e-07   p_cons 4.065041e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.493472e-06	k: 0	n:2470000
Cons ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
BRAF   2470000 perm   6166 sec   (401 perm/sec)   p_kst 4.048583e-07   p_cons 4.048583e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.487450e-06	k: 0	n:2480000
Cons ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
BRAF   2480000 perm   6202 sec   (400 perm/sec)   p_kst 4.032258e-07   p_cons 4.032258e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.481477e-06	k: 0	n:2490000
Cons ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
BRAF   2490000 perm   6238 sec   (399 perm/sec)   p_kst 4.016064e-07   p_cons 4.016064e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.475551e-06	k: 0	n:2500000
Cons ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
BRAF   2500000 perm   6273 sec   (399 perm/sec)   p_kst 4.000000e-07   p_cons 4.000000e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.469672e-06	k: 0	n:2510000
Cons ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
BRAF   2510000 perm   6308 sec   (398 perm/sec)   p_kst 3.984064e-07   p_cons 3.984064e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.463840e-06	k: 0	n:2520000
Cons ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
BRAF   2520000 perm   6344 sec   (397 perm/sec)   p_kst 3.968254e-07   p_cons 3.968254e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.458054e-06	k: 0	n:2530000
Cons ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
BRAF   2530000 perm   6380 sec   (397 perm/sec)   p_kst 3.952569e-07   p_cons 3.952569e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.452314e-06	k: 0	n:2540000
Cons ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
BRAF   2540000 perm   6416 sec   (396 perm/sec)   p_kst 3.937008e-07   p_cons 3.937008e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.446618e-06	k: 0	n:2550000
Cons ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
BRAF   2550000 perm   6452 sec   (395 perm/sec)   p_kst 3.921569e-07   p_cons 3.921569e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.440968e-06	k: 0	n:2560000
Cons ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
BRAF   2560000 perm   6488 sec   (395 perm/sec)   p_kst 3.906250e-07   p_cons 3.906250e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.435361e-06	k: 0	n:2570000
Cons ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
BRAF   2570000 perm   6524 sec   (394 perm/sec)   p_kst 3.891051e-07   p_cons 3.891051e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.429797e-06	k: 0	n:2580000
Cons ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
BRAF   2580000 perm   6560 sec   (393 perm/sec)   p_kst 3.875969e-07   p_cons 3.875969e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.424277e-06	k: 0	n:2590000
Cons ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
BRAF   2590000 perm   6595 sec   (393 perm/sec)   p_kst 3.861004e-07   p_cons 3.861004e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.418799e-06	k: 0	n:2600000
Cons ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
BRAF   2600000 perm   6631 sec   (392 perm/sec)   p_kst 3.846154e-07   p_cons 3.846154e-07   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.413363e-06	k: 0	n:2610000
Cons ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
BRAF   2610000 perm   6667 sec   (391 perm/sec)   p_kst 3.831418e-07   p_cons 3.831418e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.407968e-06	k: 0	n:2620000
Cons ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
BRAF   2620000 perm   6703 sec   (391 perm/sec)   p_kst 3.816794e-07   p_cons 3.816794e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.402615e-06	k: 0	n:2630000
Cons ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
BRAF   2630000 perm   6739 sec   (390 perm/sec)   p_kst 3.802281e-07   p_cons 3.802281e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.397302e-06	k: 0	n:2640000
Cons ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
BRAF   2640000 perm   6776 sec   (390 perm/sec)   p_kst 3.787879e-07   p_cons 3.787879e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.392029e-06	k: 0	n:2650000
Cons ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
BRAF   2650000 perm   6812 sec   (389 perm/sec)   p_kst 3.773585e-07   p_cons 3.773585e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.386796e-06	k: 0	n:2660000
Cons ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
BRAF   2660000 perm   6848 sec   (388 perm/sec)   p_kst 3.759398e-07   p_cons 3.759398e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.381602e-06	k: 0	n:2670000
Cons ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
BRAF   2670000 perm   6885 sec   (388 perm/sec)   p_kst 3.745318e-07   p_cons 3.745318e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.376447e-06	k: 0	n:2680000
Cons ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
BRAF   2680000 perm   6922 sec   (387 perm/sec)   p_kst 3.731343e-07   p_cons 3.731343e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.371330e-06	k: 0	n:2690000
Cons ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
BRAF   2690000 perm   6959 sec   (387 perm/sec)   p_kst 3.717472e-07   p_cons 3.717472e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.366251e-06	k: 0	n:2700000
Cons ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
BRAF   2700000 perm   6996 sec   (386 perm/sec)   p_kst 3.703704e-07   p_cons 3.703704e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.361209e-06	k: 0	n:2710000
Cons ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
BRAF   2710000 perm   7033 sec   (385 perm/sec)   p_kst 3.690037e-07   p_cons 3.690037e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.356205e-06	k: 0	n:2720000
Cons ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
BRAF   2720000 perm   7071 sec   (385 perm/sec)   p_kst 3.676471e-07   p_cons 3.676471e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.351237e-06	k: 0	n:2730000
Cons ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
BRAF   2730000 perm   7108 sec   (384 perm/sec)   p_kst 3.663004e-07   p_cons 3.663004e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.346305e-06	k: 0	n:2740000
Cons ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
BRAF   2740000 perm   7146 sec   (383 perm/sec)   p_kst 3.649635e-07   p_cons 3.649635e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.341410e-06	k: 0	n:2750000
Cons ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
BRAF   2750000 perm   7183 sec   (383 perm/sec)   p_kst 3.636364e-07   p_cons 3.636364e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.336550e-06	k: 0	n:2760000
Cons ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
BRAF   2760000 perm   7221 sec   (382 perm/sec)   p_kst 3.623188e-07   p_cons 3.623188e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.331725e-06	k: 0	n:2770000
Cons ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
BRAF   2770000 perm   7258 sec   (382 perm/sec)   p_kst 3.610108e-07   p_cons 3.610108e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.326934e-06	k: 0	n:2780000
Cons ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
BRAF   2780000 perm   7296 sec   (381 perm/sec)   p_kst 3.597122e-07   p_cons 3.597122e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.322178e-06	k: 0	n:2790000
Cons ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
BRAF   2790000 perm   7335 sec   (380 perm/sec)   p_kst 3.584229e-07   p_cons 3.584229e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.317456e-06	k: 0	n:2800000
Cons ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
BRAF   2800000 perm   7372 sec   (380 perm/sec)   p_kst 3.571429e-07   p_cons 3.571429e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.312768e-06	k: 0	n:2810000
Cons ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
BRAF   2810000 perm   7411 sec   (379 perm/sec)   p_kst 3.558719e-07   p_cons 3.558719e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.308112e-06	k: 0	n:2820000
Cons ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
BRAF   2820000 perm   7448 sec   (379 perm/sec)   p_kst 3.546099e-07   p_cons 3.546099e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.303490e-06	k: 0	n:2830000
Cons ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
BRAF   2830000 perm   7487 sec   (378 perm/sec)   p_kst 3.533569e-07   p_cons 3.533569e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.298900e-06	k: 0	n:2840000
Cons ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
BRAF   2840000 perm   7525 sec   (377 perm/sec)   p_kst 3.521127e-07   p_cons 3.521127e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.294343e-06	k: 0	n:2850000
Cons ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
BRAF   2850000 perm   7563 sec   (377 perm/sec)   p_kst 3.508772e-07   p_cons 3.508772e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.289817e-06	k: 0	n:2860000
Cons ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
BRAF   2860000 perm   7601 sec   (376 perm/sec)   p_kst 3.496503e-07   p_cons 3.496503e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.285323e-06	k: 0	n:2870000
Cons ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
BRAF   2870000 perm   7639 sec   (376 perm/sec)   p_kst 3.484321e-07   p_cons 3.484321e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.280860e-06	k: 0	n:2880000
Cons ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
BRAF   2880000 perm   7678 sec   (375 perm/sec)   p_kst 3.472222e-07   p_cons 3.472222e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.276428e-06	k: 0	n:2890000
Cons ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
BRAF   2890000 perm   7717 sec   (374 perm/sec)   p_kst 3.460208e-07   p_cons 3.460208e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.272027e-06	k: 0	n:2900000
Cons ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
BRAF   2900000 perm   7756 sec   (374 perm/sec)   p_kst 3.448276e-07   p_cons 3.448276e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.267655e-06	k: 0	n:2910000
Cons ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
BRAF   2910000 perm   7795 sec   (373 perm/sec)   p_kst 3.436426e-07   p_cons 3.436426e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.263314e-06	k: 0	n:2920000
Cons ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
BRAF   2920000 perm   7834 sec   (373 perm/sec)   p_kst 3.424658e-07   p_cons 3.424658e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.259002e-06	k: 0	n:2930000
Cons ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
BRAF   2930000 perm   7873 sec   (372 perm/sec)   p_kst 3.412969e-07   p_cons 3.412969e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.254720e-06	k: 0	n:2940000
Cons ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
BRAF   2940000 perm   7912 sec   (372 perm/sec)   p_kst 3.401361e-07   p_cons 3.401361e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.250467e-06	k: 0	n:2950000
Cons ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
BRAF   2950000 perm   7951 sec   (371 perm/sec)   p_kst 3.389831e-07   p_cons 3.389831e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.246242e-06	k: 0	n:2960000
Cons ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
BRAF   2960000 perm   7990 sec   (370 perm/sec)   p_kst 3.378378e-07   p_cons 3.378378e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.242046e-06	k: 0	n:2970000
Cons ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
BRAF   2970000 perm   8031 sec   (370 perm/sec)   p_kst 3.367003e-07   p_cons 3.367003e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.237878e-06	k: 0	n:2980000
Cons ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
BRAF   2980000 perm   8070 sec   (369 perm/sec)   p_kst 3.355705e-07   p_cons 3.355705e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.233738e-06	k: 0	n:2990000
Cons ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
BRAF   2990000 perm   8109 sec   (369 perm/sec)   p_kst 3.344482e-07   p_cons 3.344482e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.229626e-06	k: 0	n:3000000
Cons ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
BRAF   3000000 perm   8148 sec   (368 perm/sec)   p_kst 3.333333e-07   p_cons 3.333333e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.225541e-06	k: 0	n:3010000
Cons ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
BRAF   3010000 perm   8188 sec   (368 perm/sec)   p_kst 3.322259e-07   p_cons 3.322259e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.221483e-06	k: 0	n:3020000
Cons ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
BRAF   3020000 perm   8232 sec   (367 perm/sec)   p_kst 3.311258e-07   p_cons 3.311258e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.217451e-06	k: 0	n:3030000
Cons ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
BRAF   3030000 perm   8272 sec   (366 perm/sec)   p_kst 3.300330e-07   p_cons 3.300330e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.213446e-06	k: 0	n:3040000
Cons ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
BRAF   3040000 perm   8312 sec   (366 perm/sec)   p_kst 3.289474e-07   p_cons 3.289474e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.209468e-06	k: 0	n:3050000
Cons ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
BRAF   3050000 perm   8352 sec   (365 perm/sec)   p_kst 3.278689e-07   p_cons 3.278689e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.205515e-06	k: 0	n:3060000
Cons ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
BRAF   3060000 perm   8392 sec   (365 perm/sec)   p_kst 3.267974e-07   p_cons 3.267974e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.201589e-06	k: 0	n:3070000
Cons ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
BRAF   3070000 perm   8432 sec   (364 perm/sec)   p_kst 3.257329e-07   p_cons 3.257329e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.197687e-06	k: 0	n:3080000
Cons ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
BRAF   3080000 perm   8472 sec   (364 perm/sec)   p_kst 3.246753e-07   p_cons 3.246753e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.193811e-06	k: 0	n:3090000
Cons ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
BRAF   3090000 perm   8512 sec   (363 perm/sec)   p_kst 3.236246e-07   p_cons 3.236246e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.189960e-06	k: 0	n:3100000
Cons ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
BRAF   3100000 perm   8552 sec   (362 perm/sec)   p_kst 3.225806e-07   p_cons 3.225806e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.186134e-06	k: 0	n:3110000
Cons ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
BRAF   3110000 perm   8593 sec   (362 perm/sec)   p_kst 3.215434e-07   p_cons 3.215434e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.182332e-06	k: 0	n:3120000
Cons ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
BRAF   3120000 perm   8633 sec   (361 perm/sec)   p_kst 3.205128e-07   p_cons 3.205128e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.178555e-06	k: 0	n:3130000
Cons ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
BRAF   3130000 perm   8674 sec   (361 perm/sec)   p_kst 3.194888e-07   p_cons 3.194888e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.174802e-06	k: 0	n:3140000
Cons ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
BRAF   3140000 perm   8715 sec   (360 perm/sec)   p_kst 3.184713e-07   p_cons 3.184713e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.171072e-06	k: 0	n:3150000
Cons ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
BRAF   3150000 perm   8756 sec   (360 perm/sec)   p_kst 3.174603e-07   p_cons 3.174603e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.167366e-06	k: 0	n:3160000
Cons ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
BRAF   3160000 perm   8796 sec   (359 perm/sec)   p_kst 3.164557e-07   p_cons 3.164557e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.163684e-06	k: 0	n:3170000
Cons ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
BRAF   3170000 perm   8838 sec   (359 perm/sec)   p_kst 3.154574e-07   p_cons 3.154574e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.160024e-06	k: 0	n:3180000
Cons ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
BRAF   3180000 perm   8879 sec   (358 perm/sec)   p_kst 3.144654e-07   p_cons 3.144654e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.156388e-06	k: 0	n:3190000
Cons ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
BRAF   3190000 perm   8921 sec   (358 perm/sec)   p_kst 3.134796e-07   p_cons 3.134796e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.152774e-06	k: 0	n:3200000
Cons ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
BRAF   3200000 perm   8962 sec   (357 perm/sec)   p_kst 3.125000e-07   p_cons 3.125000e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.149183e-06	k: 0	n:3210000
Cons ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
BRAF   3210000 perm   9003 sec   (357 perm/sec)   p_kst 3.115265e-07   p_cons 3.115265e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.145614e-06	k: 0	n:3220000
Cons ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
BRAF   3220000 perm   9044 sec   (356 perm/sec)   p_kst 3.105590e-07   p_cons 3.105590e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.142067e-06	k: 0	n:3230000
Cons ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
BRAF   3230000 perm   9086 sec   (356 perm/sec)   p_kst 3.095975e-07   p_cons 3.095975e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.138542e-06	k: 0	n:3240000
Cons ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
BRAF   3240000 perm   9127 sec   (355 perm/sec)   p_kst 3.086420e-07   p_cons 3.086420e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.135039e-06	k: 0	n:3250000
Cons ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
BRAF   3250000 perm   9168 sec   (354 perm/sec)   p_kst 3.076923e-07   p_cons 3.076923e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.131557e-06	k: 0	n:3260000
Cons ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
BRAF   3260000 perm   9210 sec   (354 perm/sec)   p_kst 3.067485e-07   p_cons 3.067485e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.128097e-06	k: 0	n:3270000
Cons ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
BRAF   3270000 perm   9253 sec   (353 perm/sec)   p_kst 3.058104e-07   p_cons 3.058104e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.124658e-06	k: 0	n:3280000
Cons ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
BRAF   3280000 perm   9295 sec   (353 perm/sec)   p_kst 3.048780e-07   p_cons 3.048780e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.121239e-06	k: 0	n:3290000
Cons ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
BRAF   3290000 perm   9337 sec   (352 perm/sec)   p_kst 3.039514e-07   p_cons 3.039514e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.117842e-06	k: 0	n:3300000
Cons ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
BRAF   3300000 perm   9379 sec   (352 perm/sec)   p_kst 3.030303e-07   p_cons 3.030303e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.114464e-06	k: 0	n:3310000
Cons ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
BRAF   3310000 perm   9421 sec   (351 perm/sec)   p_kst 3.021148e-07   p_cons 3.021148e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.111108e-06	k: 0	n:3320000
Cons ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
BRAF   3320000 perm   9464 sec   (351 perm/sec)   p_kst 3.012048e-07   p_cons 3.012048e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.107771e-06	k: 0	n:3330000
Cons ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
BRAF   3330000 perm   9506 sec   (350 perm/sec)   p_kst 3.003003e-07   p_cons 3.003003e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.104454e-06	k: 0	n:3340000
Cons ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
BRAF   3340000 perm   9548 sec   (350 perm/sec)   p_kst 2.994012e-07   p_cons 2.994012e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.101157e-06	k: 0	n:3350000
Cons ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
BRAF   3350000 perm   9591 sec   (349 perm/sec)   p_kst 2.985075e-07   p_cons 2.985075e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.097880e-06	k: 0	n:3360000
Cons ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
BRAF   3360000 perm   9633 sec   (349 perm/sec)   p_kst 2.976190e-07   p_cons 2.976190e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.094622e-06	k: 0	n:3370000
Cons ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
BRAF   3370000 perm   9676 sec   (348 perm/sec)   p_kst 2.967359e-07   p_cons 2.967359e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.091384e-06	k: 0	n:3380000
Cons ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
BRAF   3380000 perm   9719 sec   (348 perm/sec)   p_kst 2.958580e-07   p_cons 2.958580e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.088164e-06	k: 0	n:3390000
Cons ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
BRAF   3390000 perm   9762 sec   (347 perm/sec)   p_kst 2.949853e-07   p_cons 2.949853e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.084964e-06	k: 0	n:3400000
Cons ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
BRAF   3400000 perm   9812 sec   (347 perm/sec)   p_kst 2.941176e-07   p_cons 2.941176e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.081782e-06	k: 0	n:3410000
Cons ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
BRAF   3410000 perm   9861 sec   (346 perm/sec)   p_kst 2.932551e-07   p_cons 2.932551e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.078619e-06	k: 0	n:3420000
Cons ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
BRAF   3420000 perm   9904 sec   (345 perm/sec)   p_kst 2.923977e-07   p_cons 2.923977e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.075474e-06	k: 0	n:3430000
Cons ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
BRAF   3430000 perm   9947 sec   (345 perm/sec)   p_kst 2.915452e-07   p_cons 2.915452e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.072348e-06	k: 0	n:3440000
Cons ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
BRAF   3440000 perm   9991 sec   (344 perm/sec)   p_kst 2.906977e-07   p_cons 2.906977e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.069240e-06	k: 0	n:3450000
Cons ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
BRAF   3450000 perm   10034 sec   (344 perm/sec)   p_kst 2.898551e-07   p_cons 2.898551e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.066150e-06	k: 0	n:3460000
Cons ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
BRAF   3460000 perm   10078 sec   (343 perm/sec)   p_kst 2.890173e-07   p_cons 2.890173e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.063077e-06	k: 0	n:3470000
Cons ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
BRAF   3470000 perm   10122 sec   (343 perm/sec)   p_kst 2.881844e-07   p_cons 2.881844e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.060022e-06	k: 0	n:3480000
Cons ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
BRAF   3480000 perm   10165 sec   (342 perm/sec)   p_kst 2.873563e-07   p_cons 2.873563e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.056985e-06	k: 0	n:3490000
Cons ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
BRAF   3490000 perm   10213 sec   (342 perm/sec)   p_kst 2.865330e-07   p_cons 2.865330e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.053965e-06	k: 0	n:3500000
Cons ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
BRAF   3500000 perm   10257 sec   (341 perm/sec)   p_kst 2.857143e-07   p_cons 2.857143e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.050962e-06	k: 0	n:3510000
Cons ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
BRAF   3510000 perm   10304 sec   (341 perm/sec)   p_kst 2.849003e-07   p_cons 2.849003e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.047977e-06	k: 0	n:3520000
Cons ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
BRAF   3520000 perm   10348 sec   (340 perm/sec)   p_kst 2.840909e-07   p_cons 2.840909e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.045008e-06	k: 0	n:3530000
Cons ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
BRAF   3530000 perm   10392 sec   (340 perm/sec)   p_kst 2.832861e-07   p_cons 2.832861e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.042056e-06	k: 0	n:3540000
Cons ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
BRAF   3540000 perm   10436 sec   (339 perm/sec)   p_kst 2.824859e-07   p_cons 2.824859e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.039120e-06	k: 0	n:3550000
Cons ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
BRAF   3550000 perm   10480 sec   (339 perm/sec)   p_kst 2.816901e-07   p_cons 2.816901e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.036202e-06	k: 0	n:3560000
Cons ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
BRAF   3560000 perm   10529 sec   (338 perm/sec)   p_kst 2.808989e-07   p_cons 2.808989e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.033299e-06	k: 0	n:3570000
Cons ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
BRAF   3570000 perm   10573 sec   (338 perm/sec)   p_kst 2.801120e-07   p_cons 2.801120e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.030413e-06	k: 0	n:3580000
Cons ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
BRAF   3580000 perm   10618 sec   (337 perm/sec)   p_kst 2.793296e-07   p_cons 2.793296e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.027542e-06	k: 0	n:3590000
Cons ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
BRAF   3590000 perm   10662 sec   (337 perm/sec)   p_kst 2.785515e-07   p_cons 2.785515e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.024688e-06	k: 0	n:3600000
Cons ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
BRAF   3600000 perm   10709 sec   (336 perm/sec)   p_kst 2.777778e-07   p_cons 2.777778e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.021850e-06	k: 0	n:3610000
Cons ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
BRAF   3610000 perm   10754 sec   (336 perm/sec)   p_kst 2.770083e-07   p_cons 2.770083e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.019027e-06	k: 0	n:3620000
Cons ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
BRAF   3620000 perm   10798 sec   (335 perm/sec)   p_kst 2.762431e-07   p_cons 2.762431e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.016220e-06	k: 0	n:3630000
Cons ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
BRAF   3630000 perm   10842 sec   (335 perm/sec)   p_kst 2.754821e-07   p_cons 2.754821e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.013428e-06	k: 0	n:3640000
Cons ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
BRAF   3640000 perm   10887 sec   (334 perm/sec)   p_kst 2.747253e-07   p_cons 2.747253e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.010651e-06	k: 0	n:3650000
Cons ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
BRAF   3650000 perm   10931 sec   (334 perm/sec)   p_kst 2.739726e-07   p_cons 2.739726e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.007890e-06	k: 0	n:3660000
Cons ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
BRAF   3660000 perm   10976 sec   (333 perm/sec)   p_kst 2.732240e-07   p_cons 2.732240e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.005144e-06	k: 0	n:3670000
Cons ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
BRAF   3670000 perm   11021 sec   (333 perm/sec)   p_kst 2.724796e-07   p_cons 2.724796e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.002412e-06	k: 0	n:3680000
Cons ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
BRAF   3680000 perm   11066 sec   (333 perm/sec)   p_kst 2.717391e-07   p_cons 2.717391e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.996958e-07	k: 0	n:3690000
Cons ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
BRAF   3690000 perm   11110 sec   (332 perm/sec)   p_kst 2.710027e-07   p_cons 2.710027e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.969940e-07	k: 0	n:3700000
Cons ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
BRAF   3700000 perm   11156 sec   (332 perm/sec)   p_kst 2.702703e-07   p_cons 2.702703e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.943066e-07	k: 0	n:3710000
Cons ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
BRAF   3710000 perm   11202 sec   (331 perm/sec)   p_kst 2.695418e-07   p_cons 2.695418e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.916338e-07	k: 0	n:3720000
Cons ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
BRAF   3720000 perm   11247 sec   (331 perm/sec)   p_kst 2.688172e-07   p_cons 2.688172e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.889752e-07	k: 0	n:3730000
Cons ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
BRAF   3730000 perm   11293 sec   (330 perm/sec)   p_kst 2.680965e-07   p_cons 2.680965e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.863309e-07	k: 0	n:3740000
Cons ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
BRAF   3740000 perm   11338 sec   (330 perm/sec)   p_kst 2.673797e-07   p_cons 2.673797e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.837007e-07	k: 0	n:3750000
Cons ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
BRAF   3750000 perm   11384 sec   (329 perm/sec)   p_kst 2.666667e-07   p_cons 2.666667e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.810845e-07	k: 0	n:3760000
Cons ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
BRAF   3760000 perm   11434 sec   (329 perm/sec)   p_kst 2.659574e-07   p_cons 2.659574e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.784821e-07	k: 0	n:3770000
Cons ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
BRAF   3770000 perm   11481 sec   (328 perm/sec)   p_kst 2.652520e-07   p_cons 2.652520e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.758936e-07	k: 0	n:3780000
Cons ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
BRAF   3780000 perm   11527 sec   (328 perm/sec)   p_kst 2.645503e-07   p_cons 2.645503e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.733186e-07	k: 0	n:3790000
Cons ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
BRAF   3790000 perm   11575 sec   (327 perm/sec)   p_kst 2.638522e-07   p_cons 2.638522e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.707573e-07	k: 0	n:3800000
Cons ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
BRAF   3800000 perm   11628 sec   (327 perm/sec)   p_kst 2.631579e-07   p_cons 2.631579e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.682094e-07	k: 0	n:3810000
Cons ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
BRAF   3810000 perm   11681 sec   (326 perm/sec)   p_kst 2.624672e-07   p_cons 2.624672e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.656748e-07	k: 0	n:3820000
Cons ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
BRAF   3820000 perm   11728 sec   (326 perm/sec)   p_kst 2.617801e-07   p_cons 2.617801e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.631534e-07	k: 0	n:3830000
Cons ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
BRAF   3830000 perm   11778 sec   (325 perm/sec)   p_kst 2.610966e-07   p_cons 2.610966e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.606452e-07	k: 0	n:3840000
Cons ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
BRAF   3840000 perm   11830 sec   (325 perm/sec)   p_kst 2.604167e-07   p_cons 2.604167e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.581500e-07	k: 0	n:3850000
Cons ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
BRAF   3850000 perm   11877 sec   (324 perm/sec)   p_kst 2.597403e-07   p_cons 2.597403e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.556678e-07	k: 0	n:3860000
Cons ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
BRAF   3860000 perm   11924 sec   (324 perm/sec)   p_kst 2.590674e-07   p_cons 2.590674e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.531984e-07	k: 0	n:3870000
Cons ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
BRAF   3870000 perm   11971 sec   (323 perm/sec)   p_kst 2.583979e-07   p_cons 2.583979e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.507417e-07	k: 0	n:3880000
Cons ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
BRAF   3880000 perm   12019 sec   (323 perm/sec)   p_kst 2.577320e-07   p_cons 2.577320e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.482976e-07	k: 0	n:3890000
Cons ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
BRAF   3890000 perm   12071 sec   (322 perm/sec)   p_kst 2.570694e-07   p_cons 2.570694e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.458661e-07	k: 0	n:3900000
Cons ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
BRAF   3900000 perm   12121 sec   (322 perm/sec)   p_kst 2.564103e-07   p_cons 2.564103e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.434470e-07	k: 0	n:3910000
Cons ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
BRAF   3910000 perm   12170 sec   (321 perm/sec)   p_kst 2.557545e-07   p_cons 2.557545e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.410402e-07	k: 0	n:3920000
Cons ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
BRAF   3920000 perm   12221 sec   (321 perm/sec)   p_kst 2.551020e-07   p_cons 2.551020e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.386457e-07	k: 0	n:3930000
Cons ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
BRAF   3930000 perm   12269 sec   (320 perm/sec)   p_kst 2.544529e-07   p_cons 2.544529e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.362634e-07	k: 0	n:3940000
Cons ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
BRAF   3940000 perm   12317 sec   (320 perm/sec)   p_kst 2.538071e-07   p_cons 2.538071e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.338931e-07	k: 0	n:3950000
Cons ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
BRAF   3950000 perm   12368 sec   (319 perm/sec)   p_kst 2.531646e-07   p_cons 2.531646e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.315348e-07	k: 0	n:3960000
Cons ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
BRAF   3960000 perm   12418 sec   (319 perm/sec)   p_kst 2.525253e-07   p_cons 2.525253e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.291883e-07	k: 0	n:3970000
Cons ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
BRAF   3970000 perm   12474 sec   (318 perm/sec)   p_kst 2.518892e-07   p_cons 2.518892e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.268537e-07	k: 0	n:3980000
Cons ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
BRAF   3980000 perm   12524 sec   (318 perm/sec)   p_kst 2.512563e-07   p_cons 2.512563e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.245308e-07	k: 0	n:3990000
Cons ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
BRAF   3990000 perm   12574 sec   (317 perm/sec)   p_kst 2.506266e-07   p_cons 2.506266e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.222194e-07	k: 0	n:4000000
Cons ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
BRAF   4000000 perm   12625 sec   (317 perm/sec)   p_kst 2.500000e-07   p_cons 2.500000e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.199196e-07	k: 0	n:4010000
Cons ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
BRAF   4010000 perm   12685 sec   (316 perm/sec)   p_kst 2.493766e-07   p_cons 2.493766e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.176313e-07	k: 0	n:4020000
Cons ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
BRAF   4020000 perm   12733 sec   (316 perm/sec)   p_kst 2.487562e-07   p_cons 2.487562e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.153543e-07	k: 0	n:4030000
Cons ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
BRAF   4030000 perm   12781 sec   (315 perm/sec)   p_kst 2.481390e-07   p_cons 2.481390e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.130886e-07	k: 0	n:4040000
Cons ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
BRAF   4040000 perm   12831 sec   (315 perm/sec)   p_kst 2.475248e-07   p_cons 2.475248e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.108340e-07	k: 0	n:4050000
Cons ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
BRAF   4050000 perm   12879 sec   (314 perm/sec)   p_kst 2.469136e-07   p_cons 2.469136e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.085906e-07	k: 0	n:4060000
Cons ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
BRAF   4060000 perm   12928 sec   (314 perm/sec)   p_kst 2.463054e-07   p_cons 2.463054e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.063582e-07	k: 0	n:4070000
Cons ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
BRAF   4070000 perm   12976 sec   (314 perm/sec)   p_kst 2.457002e-07   p_cons 2.457002e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.041367e-07	k: 0	n:4080000
Cons ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
BRAF   4080000 perm   13033 sec   (313 perm/sec)   p_kst 2.450980e-07   p_cons 2.450980e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.019261e-07	k: 0	n:4090000
Cons ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
BRAF   4090000 perm   13084 sec   (313 perm/sec)   p_kst 2.444988e-07   p_cons 2.444988e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.997263e-07	k: 0	n:4100000
Cons ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
BRAF   4100000 perm   13132 sec   (312 perm/sec)   p_kst 2.439024e-07   p_cons 2.439024e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.975372e-07	k: 0	n:4110000
Cons ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
BRAF   4110000 perm   13181 sec   (312 perm/sec)   p_kst 2.433090e-07   p_cons 2.433090e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.953587e-07	k: 0	n:4120000
Cons ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
BRAF   4120000 perm   13230 sec   (311 perm/sec)   p_kst 2.427184e-07   p_cons 2.427184e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.931908e-07	k: 0	n:4130000
Cons ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
BRAF   4130000 perm   13279 sec   (311 perm/sec)   p_kst 2.421308e-07   p_cons 2.421308e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.910333e-07	k: 0	n:4140000
Cons ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
BRAF   4140000 perm   13334 sec   (310 perm/sec)   p_kst 2.415459e-07   p_cons 2.415459e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.888862e-07	k: 0	n:4150000
Cons ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
BRAF   4150000 perm   13388 sec   (310 perm/sec)   p_kst 2.409639e-07   p_cons 2.409639e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.867495e-07	k: 0	n:4160000
Cons ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
BRAF   4160000 perm   13437 sec   (310 perm/sec)   p_kst 2.403846e-07   p_cons 2.403846e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.846230e-07	k: 0	n:4170000
Cons ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
BRAF   4170000 perm   13487 sec   (309 perm/sec)   p_kst 2.398082e-07   p_cons 2.398082e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.825067e-07	k: 0	n:4180000
Cons ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
BRAF   4180000 perm   13537 sec   (309 perm/sec)   p_kst 2.392344e-07   p_cons 2.392344e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.804004e-07	k: 0	n:4190000
Cons ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
BRAF   4190000 perm   13589 sec   (308 perm/sec)   p_kst 2.386635e-07   p_cons 2.386635e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.783042e-07	k: 0	n:4200000
Cons ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
BRAF   4200000 perm   13641 sec   (308 perm/sec)   p_kst 2.380952e-07   p_cons 2.380952e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.762180e-07	k: 0	n:4210000
Cons ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
BRAF   4210000 perm   13692 sec   (307 perm/sec)   p_kst 2.375297e-07   p_cons 2.375297e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.741417e-07	k: 0	n:4220000
Cons ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
BRAF   4220000 perm   13746 sec   (307 perm/sec)   p_kst 2.369668e-07   p_cons 2.369668e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.720751e-07	k: 0	n:4230000
Cons ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
BRAF   4230000 perm   13804 sec   (306 perm/sec)   p_kst 2.364066e-07   p_cons 2.364066e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.700184e-07	k: 0	n:4240000
Cons ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
BRAF   4240000 perm   13855 sec   (306 perm/sec)   p_kst 2.358491e-07   p_cons 2.358491e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.679713e-07	k: 0	n:4250000
Cons ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
BRAF   4250000 perm   13906 sec   (306 perm/sec)   p_kst 2.352941e-07   p_cons 2.352941e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.659338e-07	k: 0	n:4260000
Cons ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
BRAF   4260000 perm   13957 sec   (305 perm/sec)   p_kst 2.347418e-07   p_cons 2.347418e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.639058e-07	k: 0	n:4270000
Cons ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
BRAF   4270000 perm   14013 sec   (305 perm/sec)   p_kst 2.341920e-07   p_cons 2.341920e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.618874e-07	k: 0	n:4280000
Cons ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
BRAF   4280000 perm   14077 sec   (304 perm/sec)   p_kst 2.336449e-07   p_cons 2.336449e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.598783e-07	k: 0	n:4290000
Cons ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
BRAF   4290000 perm   14128 sec   (304 perm/sec)   p_kst 2.331002e-07   p_cons 2.331002e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.578786e-07	k: 0	n:4300000
Cons ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
BRAF   4300000 perm   14179 sec   (303 perm/sec)   p_kst 2.325581e-07   p_cons 2.325581e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.558881e-07	k: 0	n:4310000
Cons ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
BRAF   4310000 perm   14236 sec   (303 perm/sec)   p_kst 2.320186e-07   p_cons 2.320186e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.539069e-07	k: 0	n:4320000
Cons ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
BRAF   4320000 perm   14298 sec   (302 perm/sec)   p_kst 2.314815e-07   p_cons 2.314815e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.519348e-07	k: 0	n:4330000
Cons ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
BRAF   4330000 perm   14361 sec   (302 perm/sec)   p_kst 2.309469e-07   p_cons 2.309469e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.499719e-07	k: 0	n:4340000
Cons ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
BRAF   4340000 perm   14420 sec   (301 perm/sec)   p_kst 2.304147e-07   p_cons 2.304147e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.480179e-07	k: 0	n:4350000
Cons ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
BRAF   4350000 perm   14474 sec   (301 perm/sec)   p_kst 2.298851e-07   p_cons 2.298851e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.460729e-07	k: 0	n:4360000
Cons ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
BRAF   4360000 perm   14527 sec   (300 perm/sec)   p_kst 2.293578e-07   p_cons 2.293578e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.441368e-07	k: 0	n:4370000
Cons ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
BRAF   4370000 perm   14588 sec   (300 perm/sec)   p_kst 2.288330e-07   p_cons 2.288330e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.422096e-07	k: 0	n:4380000
Cons ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
BRAF   4380000 perm   14651 sec   (299 perm/sec)   p_kst 2.283105e-07   p_cons 2.283105e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.402911e-07	k: 0	n:4390000
Cons ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
BRAF   4390000 perm   14708 sec   (298 perm/sec)   p_kst 2.277904e-07   p_cons 2.277904e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.383813e-07	k: 0	n:4400000
Cons ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
BRAF   4400000 perm   14760 sec   (298 perm/sec)   p_kst 2.272727e-07   p_cons 2.272727e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.364803e-07	k: 0	n:4410000
Cons ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
BRAF   4410000 perm   14811 sec   (298 perm/sec)   p_kst 2.267574e-07   p_cons 2.267574e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.345878e-07	k: 0	n:4420000
Cons ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
BRAF   4420000 perm   14862 sec   (297 perm/sec)   p_kst 2.262443e-07   p_cons 2.262443e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.327038e-07	k: 0	n:4430000
Cons ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
BRAF   4430000 perm   14914 sec   (297 perm/sec)   p_kst 2.257336e-07   p_cons 2.257336e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.308284e-07	k: 0	n:4440000
Cons ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
BRAF   4440000 perm   14965 sec   (297 perm/sec)   p_kst 2.252252e-07   p_cons 2.252252e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.289613e-07	k: 0	n:4450000
Cons ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
BRAF   4450000 perm   15017 sec   (296 perm/sec)   p_kst 2.247191e-07   p_cons 2.247191e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.271027e-07	k: 0	n:4460000
Cons ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
BRAF   4460000 perm   15068 sec   (296 perm/sec)   p_kst 2.242152e-07   p_cons 2.242152e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.252523e-07	k: 0	n:4470000
Cons ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
BRAF   4470000 perm   15120 sec   (296 perm/sec)   p_kst 2.237136e-07   p_cons 2.237136e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.234103e-07	k: 0	n:4480000
Cons ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
BRAF   4480000 perm   15171 sec   (295 perm/sec)   p_kst 2.232143e-07   p_cons 2.232143e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.215764e-07	k: 0	n:4490000
Cons ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
BRAF   4490000 perm   15223 sec   (295 perm/sec)   p_kst 2.227171e-07   p_cons 2.227171e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.197507e-07	k: 0	n:4500000
Cons ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
BRAF   4500000 perm   15275 sec   (295 perm/sec)   p_kst 2.222222e-07   p_cons 2.222222e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.179330e-07	k: 0	n:4510000
Cons ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
BRAF   4510000 perm   15326 sec   (294 perm/sec)   p_kst 2.217295e-07   p_cons 2.217295e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.161234e-07	k: 0	n:4520000
Cons ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
BRAF   4520000 perm   15379 sec   (294 perm/sec)   p_kst 2.212389e-07   p_cons 2.212389e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.143218e-07	k: 0	n:4530000
Cons ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
BRAF   4530000 perm   15431 sec   (294 perm/sec)   p_kst 2.207506e-07   p_cons 2.207506e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.125282e-07	k: 0	n:4540000
Cons ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
BRAF   4540000 perm   15484 sec   (293 perm/sec)   p_kst 2.202643e-07   p_cons 2.202643e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.107424e-07	k: 0	n:4550000
Cons ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
BRAF   4550000 perm   15536 sec   (293 perm/sec)   p_kst 2.197802e-07   p_cons 2.197802e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.089645e-07	k: 0	n:4560000
Cons ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
BRAF   4560000 perm   15589 sec   (293 perm/sec)   p_kst 2.192982e-07   p_cons 2.192982e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.071943e-07	k: 0	n:4570000
Cons ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
BRAF   4570000 perm   15641 sec   (292 perm/sec)   p_kst 2.188184e-07   p_cons 2.188184e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.054319e-07	k: 0	n:4580000
Cons ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
BRAF   4580000 perm   15694 sec   (292 perm/sec)   p_kst 2.183406e-07   p_cons 2.183406e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.036771e-07	k: 0	n:4590000
Cons ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
BRAF   4590000 perm   15746 sec   (291 perm/sec)   p_kst 2.178649e-07   p_cons 2.178649e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.019300e-07	k: 0	n:4600000
Cons ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
BRAF   4600000 perm   15800 sec   (291 perm/sec)   p_kst 2.173913e-07   p_cons 2.173913e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.001904e-07	k: 0	n:4610000
Cons ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
BRAF   4610000 perm   15854 sec   (291 perm/sec)   p_kst 2.169197e-07   p_cons 2.169197e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.984584e-07	k: 0	n:4620000
Cons ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
BRAF   4620000 perm   15906 sec   (290 perm/sec)   p_kst 2.164502e-07   p_cons 2.164502e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.967339e-07	k: 0	n:4630000
Cons ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
BRAF   4630000 perm   15959 sec   (290 perm/sec)   p_kst 2.159827e-07   p_cons 2.159827e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.950168e-07	k: 0	n:4640000
Cons ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
BRAF   4640000 perm   16012 sec   (290 perm/sec)   p_kst 2.155172e-07   p_cons 2.155172e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.933071e-07	k: 0	n:4650000
Cons ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
BRAF   4650000 perm   16066 sec   (289 perm/sec)   p_kst 2.150538e-07   p_cons 2.150538e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.916047e-07	k: 0	n:4660000
Cons ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
BRAF   4660000 perm   16119 sec   (289 perm/sec)   p_kst 2.145923e-07   p_cons 2.145923e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.899096e-07	k: 0	n:4670000
Cons ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
BRAF   4670000 perm   16174 sec   (289 perm/sec)   p_kst 2.141328e-07   p_cons 2.141328e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.882218e-07	k: 0	n:4680000
Cons ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
BRAF   4680000 perm   16228 sec   (288 perm/sec)   p_kst 2.136752e-07   p_cons 2.136752e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.865412e-07	k: 0	n:4690000
Cons ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
BRAF   4690000 perm   16283 sec   (288 perm/sec)   p_kst 2.132196e-07   p_cons 2.132196e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.848677e-07	k: 0	n:4700000
Cons ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
BRAF   4700000 perm   16338 sec   (288 perm/sec)   p_kst 2.127660e-07   p_cons 2.127660e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.832013e-07	k: 0	n:4710000
Cons ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
BRAF   4710000 perm   16392 sec   (287 perm/sec)   p_kst 2.123142e-07   p_cons 2.123142e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.815419e-07	k: 0	n:4720000
Cons ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
BRAF   4720000 perm   16446 sec   (287 perm/sec)   p_kst 2.118644e-07   p_cons 2.118644e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.798896e-07	k: 0	n:4730000
Cons ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
BRAF   4730000 perm   16501 sec   (287 perm/sec)   p_kst 2.114165e-07   p_cons 2.114165e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.782443e-07	k: 0	n:4740000
Cons ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
BRAF   4740000 perm   16555 sec   (286 perm/sec)   p_kst 2.109705e-07   p_cons 2.109705e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.766059e-07	k: 0	n:4750000
Cons ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
BRAF   4750000 perm   16609 sec   (286 perm/sec)   p_kst 2.105263e-07   p_cons 2.105263e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.749744e-07	k: 0	n:4760000
Cons ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
BRAF   4760000 perm   16664 sec   (286 perm/sec)   p_kst 2.100840e-07   p_cons 2.100840e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.733497e-07	k: 0	n:4770000
Cons ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
BRAF   4770000 perm   16719 sec   (285 perm/sec)   p_kst 2.096436e-07   p_cons 2.096436e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.717318e-07	k: 0	n:4780000
Cons ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
BRAF   4780000 perm   16773 sec   (285 perm/sec)   p_kst 2.092050e-07   p_cons 2.092050e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.701207e-07	k: 0	n:4790000
Cons ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
BRAF   4790000 perm   16827 sec   (285 perm/sec)   p_kst 2.087683e-07   p_cons 2.087683e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.685163e-07	k: 0	n:4800000
Cons ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
BRAF   4800000 perm   16883 sec   (284 perm/sec)   p_kst 2.083333e-07   p_cons 2.083333e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.669185e-07	k: 0	n:4810000
Cons ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
BRAF   4810000 perm   16937 sec   (284 perm/sec)   p_kst 2.079002e-07   p_cons 2.079002e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.653274e-07	k: 0	n:4820000
Cons ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
BRAF   4820000 perm   16991 sec   (284 perm/sec)   p_kst 2.074689e-07   p_cons 2.074689e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.637429e-07	k: 0	n:4830000
Cons ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
BRAF   4830000 perm   17047 sec   (283 perm/sec)   p_kst 2.070393e-07   p_cons 2.070393e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.621649e-07	k: 0	n:4840000
Cons ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
BRAF   4840000 perm   17101 sec   (283 perm/sec)   p_kst 2.066116e-07   p_cons 2.066116e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.605934e-07	k: 0	n:4850000
Cons ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
BRAF   4850000 perm   17156 sec   (283 perm/sec)   p_kst 2.061856e-07   p_cons 2.061856e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.590284e-07	k: 0	n:4860000
Cons ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
BRAF   4860000 perm   17212 sec   (282 perm/sec)   p_kst 2.057613e-07   p_cons 2.057613e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.574698e-07	k: 0	n:4870000
Cons ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
BRAF   4870000 perm   17267 sec   (282 perm/sec)   p_kst 2.053388e-07   p_cons 2.053388e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.559176e-07	k: 0	n:4880000
Cons ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
BRAF   4880000 perm   17323 sec   (282 perm/sec)   p_kst 2.049180e-07   p_cons 2.049180e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.543718e-07	k: 0	n:4890000
Cons ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
BRAF   4890000 perm   17379 sec   (281 perm/sec)   p_kst 2.044990e-07   p_cons 2.044990e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.528323e-07	k: 0	n:4900000
Cons ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
BRAF   4900000 perm   17435 sec   (281 perm/sec)   p_kst 2.040816e-07   p_cons 2.040816e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.512990e-07	k: 0	n:4910000
Cons ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
BRAF   4910000 perm   17491 sec   (281 perm/sec)   p_kst 2.036660e-07   p_cons 2.036660e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.497720e-07	k: 0	n:4920000
Cons ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
BRAF   4920000 perm   17549 sec   (280 perm/sec)   p_kst 2.032520e-07   p_cons 2.032520e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.482511e-07	k: 0	n:4930000
Cons ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
BRAF   4930000 perm   17607 sec   (280 perm/sec)   p_kst 2.028398e-07   p_cons 2.028398e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.467365e-07	k: 0	n:4940000
Cons ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
BRAF   4940000 perm   17663 sec   (280 perm/sec)   p_kst 2.024291e-07   p_cons 2.024291e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.452279e-07	k: 0	n:4950000
Cons ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
BRAF   4950000 perm   17720 sec   (279 perm/sec)   p_kst 2.020202e-07   p_cons 2.020202e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.437254e-07	k: 0	n:4960000
Cons ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
BRAF   4960000 perm   17776 sec   (279 perm/sec)   p_kst 2.016129e-07   p_cons 2.016129e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.422290e-07	k: 0	n:4970000
Cons ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
BRAF   4970000 perm   17832 sec   (279 perm/sec)   p_kst 2.012072e-07   p_cons 2.012072e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.407386e-07	k: 0	n:4980000
Cons ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
BRAF   4980000 perm   17891 sec   (278 perm/sec)   p_kst 2.008032e-07   p_cons 2.008032e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.392541e-07	k: 0	n:4990000
Cons ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
BRAF   4990000 perm   17949 sec   (278 perm/sec)   p_kst 2.004008e-07   p_cons 2.004008e-07   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.377756e-07	k: 0	n:5000000
Cons ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
BRAF   5000000 perm   18006 sec   (278 perm/sec)   p_kst 2.000000e-07   p_cons 2.000000e-07   p_joint 0

Outputting figure to mutsig2_images.part000000000017/BRAF.183_2373_5000000_2e-07_2e-07_0.png
                gene_name: BRAF
               theta_stop: 3.9 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 2.00e-07 
      ci_cons_bounds_left: 5.06e-09 
     ci_cons_bounds_right: 1.11e-06 
                  p_joint: 0 
     ci_joint_bounds_left: 0 
    ci_joint_bounds_right: 7.38e-07 

Current progress: 11 percent done.
BMS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.861344e-01	ci left: 8.233934e-03	ci right 1.225906e-02	k: 101	n:10000
Cons ci ratio: 1.269826e-01	ci left: 8.144990e-02	ci right 9.259206e-02	k: 869	n:10000
KS ci ratio: 3.716778e-01	ci left: 8.958341e-03	ci right 1.313383e-02	k: 109	n:10000
BMS1   10000 perm   2 sec   (5004 perm/sec)   p_kst 1.090000e-02   p_cons 8.690000e-02   p_joint 1.010000e-02

Joint ci ratio: 5.836868e-01	ci left: 1.598964e-03	ci right 2.952284e-03	k: 44	n:20000
Cons ci ratio: 1.075810e-01	ci left: 5.889161e-02	ci right 6.563634e-02	k: 1244	n:20000
KS ci ratio: 2.610287e-01	ci left: 9.694399e-03	ci right 1.265029e-02	k: 222	n:20000
BMS1   20000 perm   5 sec   (4364 perm/sec)   p_kst 1.110000e-02   p_cons 6.220000e-02   p_joint 2.200000e-03

Joint ci ratio: 5.839110e-01	ci left: 1.065878e-03	ci right 1.968437e-03	k: 44	n:30000
Cons ci ratio: 8.667064e-02	ci left: 6.106012e-02	ci right 6.662471e-02	k: 1914	n:30000
KS ci ratio: 2.132920e-01	ci left: 9.945298e-03	ci right 1.235078e-02	k: 333	n:30000
BMS1   30000 perm   7 sec   (4185 perm/sec)   p_kst 1.110000e-02   p_cons 6.380000e-02   p_joint 1.466667e-03

Joint ci ratio: 4.583767e-01	ci left: 1.408647e-03	ci right 2.266273e-03	k: 72	n:40000
Cons ci ratio: 7.528522e-02	ci left: 6.108035e-02	ci right 6.588326e-02	k: 2538	n:40000
KS ci ratio: 1.843685e-01	ci left: 1.014409e-02	ci right 1.222778e-02	k: 446	n:40000
BMS1   40000 perm   10 sec   (4034 perm/sec)   p_kst 1.115000e-02   p_cons 6.345000e-02   p_joint 1.800000e-03

Joint ci ratio: 1.773156e-01	ci left: 8.821240e-03	ci right 1.055640e-02	k: 483	n:50000
Cons ci ratio: 6.723274e-02	ci left: 6.151569e-02	ci right 6.581513e-02	k: 3182	n:50000
KS ci ratio: 1.631059e-01	ci left: 1.048793e-02	ci right 1.236944e-02	k: 570	n:50000
BMS1   50000 perm   13 sec   (3889 perm/sec)   p_kst 1.140000e-02   p_cons 6.364000e-02   p_joint 9.660000e-03

Joint ci ratio: 1.612787e-01	ci left: 8.963225e-03	ci right 1.055140e-02	k: 584	n:60000
Cons ci ratio: 6.110709e-02	ci left: 6.221868e-02	ci right 6.615694e-02	k: 3850	n:60000
KS ci ratio: 1.486974e-01	ci left: 1.059802e-02	ci right 1.231639e-02	k: 686	n:60000
BMS1   60000 perm   16 sec   (3843 perm/sec)   p_kst 1.143333e-02   p_cons 6.416667e-02   p_joint 9.733333e-03

Joint ci ratio: 1.503757e-01	ci left: 8.890904e-03	ci right 1.035018e-02	k: 672	n:70000
Cons ci ratio: 5.646575e-02	ci left: 6.259255e-02	ci right 6.624366e-02	k: 4508	n:70000
KS ci ratio: 1.383234e-01	ci left: 1.055774e-02	ci right 1.214030e-02	k: 793	n:70000
BMS1   70000 perm   18 sec   (3794 perm/sec)   p_kst 1.132857e-02   p_cons 6.440000e-02   p_joint 9.600000e-03

Joint ci ratio: 1.374641e-01	ci left: 9.370380e-03	ci right 1.076549e-02	k: 804	n:80000
Cons ci ratio: 5.280326e-02	ci left: 6.274566e-02	ci right 6.616101e-02	k: 5155	n:80000
KS ci ratio: 1.284219e-01	ci left: 1.077268e-02	ci right 1.226306e-02	k: 920	n:80000
BMS1   80000 perm   21 sec   (3731 perm/sec)   p_kst 1.150000e-02   p_cons 6.443750e-02   p_joint 1.005000e-02

Joint ci ratio: 1.291441e-01	ci left: 9.478527e-03	ci right 1.079778e-02	k: 911	n:90000
Cons ci ratio: 4.991001e-02	ci left: 6.254127e-02	ci right 6.575356e-02	k: 5772	n:90000
KS ci ratio: 1.219813e-01	ci left: 1.065200e-02	ci right 1.204643e-02	k: 1020	n:90000
BMS1   90000 perm   24 sec   (3681 perm/sec)   p_kst 1.133333e-02   p_cons 6.413333e-02   p_joint 1.012222e-02

Joint ci ratio: 1.215711e-01	ci left: 9.664062e-03	ci right 1.092459e-02	k: 1028	n:100000
Cons ci ratio: 4.733085e-02	ci left: 6.266870e-02	ci right 6.571663e-02	k: 6418	n:100000
KS ci ratio: 1.157446e-01	ci left: 1.068323e-02	ci right 1.200535e-02	k: 1133	n:100000
BMS1   100000 perm   28 sec   (3626 perm/sec)   p_kst 1.133000e-02   p_cons 6.418000e-02   p_joint 1.028000e-02

Joint ci ratio: 1.161678e-01	ci left: 9.649932e-03	ci right 1.084883e-02	k: 1126	n:110000
Cons ci ratio: 4.517233e-02	ci left: 6.262356e-02	ci right 6.552675e-02	k: 7047	n:110000
KS ci ratio: 1.105556e-01	ci left: 1.067489e-02	ci right 1.193289e-02	k: 1242	n:110000
BMS1   110000 perm   31 sec   (3572 perm/sec)   p_kst 1.129091e-02   p_cons 6.406364e-02   p_joint 1.023636e-02

Joint ci ratio: 1.110151e-01	ci left: 9.712126e-03	ci right 1.086172e-02	k: 1233	n:120000
Cons ci ratio: 4.321539e-02	ci left: 6.277832e-02	ci right 6.555945e-02	k: 7699	n:120000
KS ci ratio: 1.063659e-01	ci left: 1.059602e-02	ci right 1.179444e-02	k: 1342	n:120000
BMS1   120000 perm   34 sec   (3518 perm/sec)   p_kst 1.118333e-02   p_cons 6.415833e-02   p_joint 1.027500e-02

Joint ci ratio: 1.068553e-01	ci left: 9.698345e-03	ci right 1.080059e-02	k: 1331	n:130000
Cons ci ratio: 4.145809e-02	ci left: 6.301060e-02	ci right 6.568579e-02	k: 8364	n:130000
KS ci ratio: 1.020483e-01	ci left: 1.065002e-02	ci right 1.180271e-02	k: 1458	n:130000
BMS1   130000 perm   37 sec   (3471 perm/sec)   p_kst 1.121538e-02   p_cons 6.433846e-02   p_joint 1.023846e-02

Joint ci ratio: 1.026601e-01	ci left: 9.777713e-03	ci right 1.084272e-02	k: 1442	n:140000
Cons ci ratio: 4.001287e-02	ci left: 6.287200e-02	ci right 6.544609e-02	k: 8981	n:140000
KS ci ratio: 9.862969e-02	ci left: 1.060654e-02	ci right 1.171385e-02	k: 1561	n:140000
BMS1   140000 perm   41 sec   (3408 perm/sec)   p_kst 1.115000e-02   p_cons 6.415000e-02   p_joint 1.030000e-02

Joint ci ratio: 9.927877e-02	ci left: 9.775697e-03	ci right 1.080336e-02	k: 1542	n:150000
Cons ci ratio: 3.870248e-02	ci left: 6.277311e-02	ci right 6.525711e-02	k: 9601	n:150000
KS ci ratio: 9.535947e-02	ci left: 1.060848e-02	ci right 1.167721e-02	k: 1670	n:150000
BMS1   150000 perm   45 sec   (3359 perm/sec)   p_kst 1.113333e-02   p_cons 6.400667e-02   p_joint 1.028000e-02

Outputting figure to mutsig2_images.part000000000017/BMS1.2_3937_150000_0.011133_0.064007_0.01028.png
                gene_name: BMS1
               theta_stop: 0.099 
                    nperm: 150000 
                     p_ks: 0.011 
        ci_ks_bounds_left: 0.011 
       ci_ks_bounds_right: 0.012 
                   p_cons: 0.064 
      ci_cons_bounds_left: 0.063 
     ci_cons_bounds_right: 0.065 
                  p_joint: 0.010 
     ci_joint_bounds_left: 0.0098 
    ci_joint_bounds_right: 0.011 

Current progress: 22 percent done.
BNC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.659946e-02	ci left: 5.243644e-01	ci right 5.440157e-01	k: 5342	n:10000
KS ci ratio: 2.016252e-02	ci left: 7.826940e-01	ci right 7.987363e-01	k: 7908	n:10000
BNC1   10000 perm   2 sec   (5167 perm/sec)   p_kst 7.908000e-01   p_cons 5.342000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000017/BNC1.2_3005_10000_0.7908_0.5342_1.png
                gene_name: BNC1
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.53 
      ci_cons_bounds_left: 0.52 
     ci_cons_bounds_right: 0.54 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
BOC
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.119136e-02	ci left: 9.193534e-01	ci right 9.297976e-01	k: 9247	n:10000
Cons ci ratio: 1.004086e-02	ci left: 9.336122e-01	ci right 9.431305e-01	k: 9385	n:10000
KS ci ratio: 1.889386e-02	ci left: 8.036941e-01	ci right 8.191241e-01	k: 8115	n:10000
BOC   10000 perm   2 sec   (5070 perm/sec)   p_kst 8.115000e-01   p_cons 9.385000e-01   p_joint 9.247000e-01

Outputting figure to mutsig2_images.part000000000017/BOC.2_3417_10000_0.8115_0.9385_0.9247.png
                gene_name: BOC
               theta_stop: 0.019 
                    nperm: 10000 
                     p_ks: 0.81 
        ci_ks_bounds_left: 0.80 
       ci_ks_bounds_right: 0.82 
                   p_cons: 0.94 
      ci_cons_bounds_left: 0.93 
     ci_cons_bounds_right: 0.94 
                  p_joint: 0.92 
     ci_joint_bounds_left: 0.92 
    ci_joint_bounds_right: 0.93 

Current progress: 44 percent done.
BOD1L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.065500e-02	ci left: 7.744852e-01	ci right 7.907498e-01	k: 7827	n:10000
Cons ci ratio: 5.144913e-02	ci left: 3.577420e-01	ci right 3.767354e-01	k: 3672	n:10000
KS ci ratio: 8.757768e-02	ci left: 1.595411e-01	ci right 1.742535e-01	k: 1668	n:10000
BOD1L   10000 perm   3 sec   (3083 perm/sec)   p_kst 1.668000e-01   p_cons 3.672000e-01   p_joint 7.827000e-01

Outputting figure to mutsig2_images.part000000000017/BOD1L.2_9260_10000_0.1668_0.3672_0.7827.png
                gene_name: BOD1L
               theta_stop: 0.088 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.17 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.78 
     ci_joint_bounds_left: 0.77 
    ci_joint_bounds_right: 0.79 

Current progress: 56 percent done.
BPTF
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.080061e-02	ci left: 7.720539e-01	ci right 7.883826e-01	k: 7803	n:10000
KS ci ratio: 1.693796e-02	ci left: 8.354145e-01	ci right 8.497853e-01	k: 8427	n:10000
BPTF   10000 perm   4 sec   (2836 perm/sec)   p_kst 8.427000e-01   p_cons 7.803000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000017/BPTF.2_9261_10000_0.8427_0.7803_1.png
                gene_name: BPTF
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.84 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.79 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
BRCA2
Processing conservation and coverage...
96% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.033792e-01	ci left: 1.191644e-01	ci right 1.322545e-01	k: 1256	n:10000
Cons ci ratio: 6.985136e-02	ci left: 2.310633e-01	ci right 2.478887e-01	k: 2394	n:10000
KS ci ratio: 1.108764e-01	ci left: 1.049071e-01	ci right 1.173205e-01	k: 1110	n:10000
BRCA2   10000 perm   4 sec   (2842 perm/sec)   p_kst 1.110000e-01   p_cons 2.394000e-01   p_joint 1.256000e-01

Joint ci ratio: 7.164200e-02	ci left: 1.255159e-01	ci right 1.348919e-01	k: 2603	n:20000
Cons ci ratio: 4.887638e-02	ci left: 2.373661e-01	ci right 2.493086e-01	k: 4866	n:20000
KS ci ratio: 7.814601e-02	ci left: 1.073661e-01	ci right 1.161471e-01	k: 2234	n:20000
BRCA2   20000 perm   7 sec   (2711 perm/sec)   p_kst 1.117000e-01   p_cons 2.433000e-01   p_joint 1.301500e-01

Outputting figure to mutsig2_images.part000000000017/BRCA2.2_10361_20000_0.1117_0.2433_0.13015.png
                gene_name: BRCA2
               theta_stop: 0.078 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.24 
      ci_cons_bounds_left: 0.24 
     ci_cons_bounds_right: 0.25 
                  p_joint: 0.13 
     ci_joint_bounds_left: 0.13 
    ci_joint_bounds_right: 0.13 

Current progress: 78 percent done.
BRIX1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.669611e-02	ci left: 4.036251e-01	ci right 4.230255e-01	k: 4133	n:10000
Cons ci ratio: 2.880677e-02	ci left: 6.398548e-01	ci right 6.586581e-01	k: 6493	n:10000
KS ci ratio: 1.723172e-01	ci left: 4.494682e-02	ci right 5.351821e-02	k: 491	n:10000
BRIX1   10000 perm   2 sec   (6389 perm/sec)   p_kst 4.910000e-02   p_cons 6.493000e-01   p_joint 4.133000e-01

Joint ci ratio: 4.469214e-02	ci left: 2.715503e-01	ci right 2.840143e-01	k: 5555	n:20000
Cons ci ratio: 2.048002e-02	ci left: 6.401801e-01	ci right 6.534772e-01	k: 12937	n:20000
KS ci ratio: 1.213959e-01	ci left: 4.653451e-02	ci right 5.259730e-02	k: 990	n:20000
BRIX1   20000 perm   4 sec   (5543 perm/sec)   p_kst 4.950000e-02   p_cons 6.468500e-01   p_joint 2.777500e-01

Joint ci ratio: 3.616939e-02	ci left: 2.762499e-01	ci right 2.864592e-01	k: 8440	n:30000
Cons ci ratio: 1.665810e-02	ci left: 6.431669e-01	ci right 6.540043e-01	k: 19458	n:30000
KS ci ratio: 9.970367e-02	ci left: 4.655183e-02	ci right 5.146931e-02	k: 1469	n:30000
BRIX1   30000 perm   6 sec   (5032 perm/sec)   p_kst 4.896667e-02   p_cons 6.486000e-01   p_joint 2.813333e-01

Outputting figure to mutsig2_images.part000000000017/BRIX1.2_1102_30000_0.048967_0.6486_0.28133.png
                gene_name: BRIX1
               theta_stop: 0.100 
                    nperm: 30000 
                     p_ks: 0.049 
        ci_ks_bounds_left: 0.047 
       ci_ks_bounds_right: 0.051 
                   p_cons: 0.65 
      ci_cons_bounds_left: 0.64 
     ci_cons_bounds_right: 0.65 
                  p_joint: 0.28 
     ci_joint_bounds_left: 0.28 
    ci_joint_bounds_right: 0.29 

Current progress: 89 percent done.
BTBD7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.166602e-02	ci left: 9.131707e-01	ci right 9.239840e-01	k: 9187	n:10000
KS ci ratio: 8.285235e-02	ci left: 1.752679e-01	ci right 1.905173e-01	k: 1828	n:10000
BTBD7   10000 perm   2 sec   (4916 perm/sec)   p_kst 1.828000e-01   p_cons 9.187000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000017/BTBD7.2_3514_10000_0.1828_0.9187_1.png
                gene_name: BTBD7
               theta_stop: 0.083 
                    nperm: 10000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.18 
       ci_ks_bounds_right: 0.19 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.92 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000017
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 17 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1538>
Subject: Job 8704119: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1538>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000018> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:38:14 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000018.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000018.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 18  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000018.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    441.10 sec.
    Max Memory :      5799 MB
    Max Swap   :      8546 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
18
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 18
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 18: processing genes 1539 - 1628
Calculating significance of each gene.
Using projection method.
1539	BTF3L4	1
1540	BTG1	1
1541	BTG2	1
1542	BTG3	1
1543	BTG4	1
1544	BTK	1
1545	BTLA	1
1546	BTN1A1	1
1547	BTN2A1	2.212561e-01
1548	BTN2A2	1
1549	BTN3A1	1
1550	BTN3A2	1
1551	BTN3A3	1
1552	BTNL2	1
1553	BTNL3	1
1554	BTNL8	1
1555	BTNL9	1
1556	BTRC	1
1557	BUB1	1
1558	BUB1B	1
1559	BUB3	1
1560	BUD13	1
1561	BUD31	1
1562	BVES	1
1563	BYSL	1
1564	BZRAP1	1
1565	BZW1	1
1566	BZW2	1
1567	C10orf10	1
1568	C10orf107	1
1569	C10orf11	1
1570	C10orf111	1
1571	C10orf113	1
1572	C10orf114	1
1573	C10orf116	1
1574	C10orf118	1
In gene C10orf119 the following bins exceed PROBCAP:
    THCA-CE-A27D-TP	categ 6	N = 1931    n = 1	mu =   1.03e-07
1575	C10orf119	1.110270e-01
1576	C10orf12	6.130438e-02
1577	C10orf120	6.850416e-02
1578	C10orf125	1
1579	C10orf128	1
1580	C10orf129	1
1581	C10orf137	3.530227e-01
1582	C10orf140	9.171641e-02
1583	C10orf18	6.180942e-01
1584	C10orf2	1
1585	C10orf25	1
1586	C10orf26	1
1587	C10orf27	1
1588	C10orf28	2.644753e-01
1589	C10orf32	1
1590	C10orf35	1
1591	C10orf46	1
1592	C10orf47	9.055012e-02
1593	C10orf53	1
1594	C10orf54	1
1595	C10orf55	1
1596	C10orf57	1
1597	C10orf58	1
1598	C10orf62	1
1599	C10orf67	1
1600	C10orf68	1
In gene C10orf71 the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 2128    n = 1	mu =   2.03e-07
1601	C10orf71	1.573798e-04
1602	C10orf72	1
1603	C10orf76	1.159595e-01
1604	C10orf78	1
1605	C10orf79	1
1606	C10orf81	1
1607	C10orf82	1
1608	C10orf84	1
1609	C10orf88	1
1610	C10orf90	3.677640e-03
1611	C10orf91	1
1612	C10orf93	1
1613	C10orf95	1
1614	C10orf96	1
1615	C10orf99	1
1616	C11orf1	1
1617	C11orf10	1
1618	C11orf16	1
1619	C11orf17	1
1620	C11orf2	1.650173e-01
1621	C11orf24	1
1622	C11orf30	1
1623	C11orf31	1
1624	C11orf35	1
1625	C11orf40	1
1626	C11orf41	1
1627	C11orf42	1
1628	C11orf45	1
Done

Running MutSig 2:
Scatter job 18: processing genes 1539 - 1628
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C10orf71
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.716778e-01	ci left: 8.958341e-03	ci right 1.313383e-02	k: 109	n:10000
Cons ci ratio: 5.369981e-01	ci left: 3.885975e-03	ci right 6.813584e-03	k: 52	n:10000
KS ci ratio: 1.342088e-01	ci left: 7.330186e-02	ci right 8.394515e-02	k: 785	n:10000
C10orf71   10000 perm   2 sec   (4563 perm/sec)   p_kst 7.850000e-02   p_cons 5.200000e-03   p_joint 1.090000e-02

Joint ci ratio: 3.552752e-01	ci left: 4.977027e-03	ci right 7.170311e-03	k: 120	n:20000
Cons ci ratio: 3.815379e-01	ci left: 4.250695e-03	ci right 6.297200e-03	k: 104	n:20000
KS ci ratio: 9.425271e-02	ci left: 7.583612e-02	ci right 8.338663e-02	k: 1591	n:20000
C10orf71   20000 perm   8 sec   (2540 perm/sec)   p_kst 7.955000e-02   p_cons 5.200000e-03   p_joint 6.000000e-03

Joint ci ratio: 3.782780e-01	ci left: 2.893683e-03	ci right 4.271882e-03	k: 106	n:30000
Cons ci ratio: 3.034031e-01	ci left: 4.694616e-03	ci right 6.403287e-03	k: 165	n:30000
KS ci ratio: 7.761271e-02	ci left: 7.531708e-02	ci right 8.143153e-02	k: 2350	n:30000
C10orf71   30000 perm   10 sec   (2870 perm/sec)   p_kst 7.833333e-02   p_cons 5.500000e-03   p_joint 3.533333e-03

Joint ci ratio: 4.405932e-01	ci left: 1.541690e-03	ci right 2.433099e-03	k: 78	n:40000
Cons ci ratio: 2.653809e-01	ci left: 4.705407e-03	ci right 6.167803e-03	k: 216	n:40000
KS ci ratio: 6.599652e-02	ci left: 7.836887e-02	ci right 8.374213e-02	k: 3241	n:40000
C10orf71   40000 perm   13 sec   (3040 perm/sec)   p_kst 8.102500e-02   p_cons 5.400000e-03   p_joint 1.950000e-03

Joint ci ratio: 3.896565e-01	ci left: 1.627567e-03	ci right 2.432010e-03	k: 100	n:50000
Cons ci ratio: 2.379163e-01	ci left: 4.757670e-03	ci right 6.060767e-03	k: 269	n:50000
KS ci ratio: 5.875746e-02	ci left: 7.933321e-02	ci right 8.415548e-02	k: 4086	n:50000
C10orf71   50000 perm   16 sec   (3127 perm/sec)   p_kst 8.172000e-02   p_cons 5.380000e-03   p_joint 2.000000e-03

Joint ci ratio: 3.717225e-01	ci left: 1.507011e-03	ci right 2.209247e-03	k: 110	n:60000
Cons ci ratio: 2.195849e-01	ci left: 4.703216e-03	ci right 5.878751e-03	k: 316	n:60000
KS ci ratio: 5.382592e-02	ci left: 7.902641e-02	ci right 8.341420e-02	k: 4872	n:60000
C10orf71   60000 perm   19 sec   (3149 perm/sec)   p_kst 8.120000e-02   p_cons 5.266667e-03   p_joint 1.833333e-03

Joint ci ratio: 3.684622e-01	ci left: 1.317612e-03	ci right 1.924903e-03	k: 112	n:70000
Cons ci ratio: 2.024270e-01	ci left: 4.789134e-03	ci right 5.881058e-03	k: 372	n:70000
KS ci ratio: 4.989608e-02	ci left: 7.900322e-02	ci right 8.306016e-02	k: 5671	n:70000
C10orf71   70000 perm   22 sec   (3188 perm/sec)   p_kst 8.101429e-02   p_cons 5.314286e-03   p_joint 1.600000e-03

Joint ci ratio: 3.822993e-01	ci left: 1.062314e-03	ci right 1.574951e-03	k: 104	n:80000
Cons ci ratio: 1.907725e-01	ci left: 4.749083e-03	ci right 5.762305e-03	k: 419	n:80000
KS ci ratio: 4.665900e-02	ci left: 7.918018e-02	ci right 8.297526e-02	k: 6485	n:80000
C10orf71   80000 perm   25 sec   (3196 perm/sec)   p_kst 8.106250e-02   p_cons 5.237500e-03   p_joint 1.300000e-03

Joint ci ratio: 2.118762e-01	ci left: 3.387492e-03	ci right 4.200562e-03	k: 340	n:90000
Cons ci ratio: 1.801498e-01	ci left: 4.761784e-03	ci right 5.714978e-03	k: 470	n:90000
KS ci ratio: 4.413800e-02	ci left: 7.879651e-02	ci right 8.236391e-02	k: 7251	n:90000
C10orf71   90000 perm   28 sec   (3200 perm/sec)   p_kst 8.056667e-02   p_cons 5.222222e-03   p_joint 3.777778e-03

Joint ci ratio: 2.241149e-01	ci left: 2.708273e-03	ci right 3.401048e-03	k: 304	n:100000
Cons ci ratio: 1.703065e-01	ci left: 4.821071e-03	ci right 5.727988e-03	k: 526	n:100000
KS ci ratio: 4.197729e-02	ci left: 7.852381e-02	ci right 8.190058e-02	k: 8020	n:100000
C10orf71   100000 perm   31 sec   (3195 perm/sec)   p_kst 8.020000e-02   p_cons 5.260000e-03   p_joint 3.040000e-03

Joint ci ratio: 2.582056e-01	ci left: 1.821126e-03	ci right 2.369294e-03	k: 229	n:110000
Cons ci ratio: 1.705102e-01	ci left: 4.374001e-03	ci right 5.197897e-03	k: 525	n:110000
KS ci ratio: 4.001171e-02	ci left: 7.864654e-02	ci right 8.186654e-02	k: 8827	n:110000
C10orf71   110000 perm   35 sec   (3181 perm/sec)   p_kst 8.024545e-02   p_cons 4.772727e-03   p_joint 2.081818e-03

Joint ci ratio: 1.388301e-01	ci left: 6.141611e-03	ci right 7.065810e-03	k: 791	n:120000
Cons ci ratio: 1.630825e-01	ci left: 4.400800e-03	ci right 5.190092e-03	k: 574	n:120000
KS ci ratio: 3.834413e-02	ci left: 7.857842e-02	ci right 8.165857e-02	k: 9613	n:120000
C10orf71   120000 perm   38 sec   (3169 perm/sec)   p_kst 8.010833e-02   p_cons 4.783333e-03   p_joint 6.591667e-03

Joint ci ratio: 1.584733e-01	ci left: 4.313277e-03	ci right 5.062926e-03	k: 608	n:130000
Cons ci ratio: 1.571819e-01	ci left: 4.387175e-03	ci right 5.142869e-03	k: 618	n:130000
KS ci ratio: 3.681137e-02	ci left: 7.875199e-02	ci right 8.171292e-02	k: 10429	n:130000
C10orf71   130000 perm   41 sec   (3149 perm/sec)   p_kst 8.022308e-02   p_cons 4.753846e-03   p_joint 4.676923e-03

Joint ci ratio: 1.579797e-01	ci left: 4.032579e-03	ci right 4.731050e-03	k: 612	n:140000
Cons ci ratio: 1.509663e-01	ci left: 4.430925e-03	ci right 5.161246e-03	k: 670	n:140000
KS ci ratio: 3.540778e-02	ci left: 7.907290e-02	ci right 8.193022e-02	k: 11269	n:140000
C10orf71   140000 perm   45 sec   (3118 perm/sec)   p_kst 8.049286e-02   p_cons 4.785714e-03   p_joint 4.371429e-03

Joint ci ratio: 1.581325e-01	ci left: 3.757295e-03	ci right 4.408771e-03	k: 611	n:150000
Cons ci ratio: 1.460443e-01	ci left: 4.430803e-03	ci right 5.135216e-03	k: 716	n:150000
KS ci ratio: 3.418716e-02	ci left: 7.920734e-02	ci right 8.196890e-02	k: 12087	n:150000
C10orf71   150000 perm   49 sec   (3092 perm/sec)   p_kst 8.058000e-02   p_cons 4.773333e-03   p_joint 4.073333e-03

Joint ci ratio: 1.536795e-01	ci left: 3.738684e-03	ci right 4.366997e-03	k: 647	n:160000
Cons ci ratio: 1.402869e-01	ci left: 4.515462e-03	ci right 5.202669e-03	k: 776	n:160000
KS ci ratio: 3.309023e-02	ci left: 7.930164e-02	ci right 8.197608e-02	k: 12901	n:160000
C10orf71   160000 perm   52 sec   (3066 perm/sec)   p_kst 8.063125e-02   p_cons 4.850000e-03   p_joint 4.043750e-03

Joint ci ratio: 2.105253e-01	ci left: 1.821076e-03	ci right 2.255011e-03	k: 345	n:170000
Cons ci ratio: 1.363943e-01	ci left: 4.505390e-03	ci right 5.170493e-03	k: 821	n:170000
KS ci ratio: 3.243328e-02	ci left: 7.784462e-02	ci right 8.041681e-02	k: 13451	n:170000
C10orf71   170000 perm   56 sec   (3039 perm/sec)   p_kst 7.912353e-02   p_cons 4.829412e-03   p_joint 2.029412e-03

Joint ci ratio: 2.058228e-01	ci left: 1.804159e-03	ci right 2.223251e-03	k: 361	n:180000
Cons ci ratio: 1.325785e-01	ci left: 4.512787e-03	ci right 5.158875e-03	k: 869	n:180000
KS ci ratio: 3.151984e-02	ci left: 7.787924e-02	ci right 8.037878e-02	k: 14242	n:180000
C10orf71   180000 perm   60 sec   (3012 perm/sec)   p_kst 7.912222e-02   p_cons 4.827778e-03   p_joint 2.005556e-03

Joint ci ratio: 2.162583e-01	ci left: 1.539684e-03	ci right 1.917884e-03	k: 327	n:190000
Cons ci ratio: 1.295633e-01	ci left: 4.483981e-03	ci right 5.110222e-03	k: 910	n:190000
KS ci ratio: 3.062200e-02	ci left: 7.818289e-02	ci right 8.061943e-02	k: 15085	n:190000
C10orf71   190000 perm   64 sec   (2985 perm/sec)   p_kst 7.939474e-02   p_cons 4.789474e-03   p_joint 1.721053e-03

Joint ci ratio: 2.036020e-01	ci left: 1.661680e-03	ci right 2.042991e-03	k: 369	n:200000
Cons ci ratio: 1.264782e-01	ci left: 4.477576e-03	ci right 5.086914e-03	k: 955	n:200000
KS ci ratio: 2.984562e-02	ci left: 7.821871e-02	ci right 8.059350e-02	k: 15880	n:200000
C10orf71   200000 perm   68 sec   (2956 perm/sec)   p_kst 7.940000e-02   p_cons 4.775000e-03   p_joint 1.845000e-03

Joint ci ratio: 2.169396e-01	ci left: 1.384028e-03	ci right 1.725206e-03	k: 325	n:210000
Cons ci ratio: 1.229266e-01	ci left: 4.522713e-03	ci right 5.119653e-03	k: 1011	n:210000
KS ci ratio: 2.913303e-02	ci left: 7.821398e-02	ci right 8.053098e-02	k: 16667	n:210000
C10orf71   210000 perm   72 sec   (2928 perm/sec)   p_kst 7.936667e-02   p_cons 4.814286e-03   p_joint 1.547619e-03

Joint ci ratio: 2.182926e-01	ci left: 1.303921e-03	ci right 1.627625e-03	k: 321	n:220000
Cons ci ratio: 1.198841e-01	ci left: 4.546324e-03	ci right 5.130476e-03	k: 1063	n:220000
KS ci ratio: 2.844439e-02	ci left: 7.833675e-02	ci right 8.060162e-02	k: 17482	n:220000
C10orf71   220000 perm   76 sec   (2900 perm/sec)   p_kst 7.946364e-02   p_cons 4.831818e-03   p_joint 1.459091e-03

Joint ci ratio: 2.143366e-01	ci left: 1.296575e-03	ci right 1.611855e-03	k: 333	n:230000
Cons ci ratio: 1.175340e-01	ci left: 4.530061e-03	ci right 5.099920e-03	k: 1106	n:230000
KS ci ratio: 2.785617e-02	ci left: 7.816861e-02	ci right 8.038114e-02	k: 18232	n:230000
C10orf71   230000 perm   80 sec   (2871 perm/sec)   p_kst 7.926957e-02   p_cons 4.808696e-03   p_joint 1.447826e-03

Joint ci ratio: 1.442711e-01	ci left: 2.845375e-03	ci right 3.291760e-03	k: 735	n:240000
Cons ci ratio: 1.150659e-01	ci left: 4.535491e-03	ci right 5.093238e-03	k: 1154	n:240000
KS ci ratio: 2.728504e-02	ci left: 7.811017e-02	ci right 8.027500e-02	k: 19005	n:240000
C10orf71   240000 perm   84 sec   (2842 perm/sec)   p_kst 7.918750e-02   p_cons 4.808333e-03   p_joint 3.062500e-03

Joint ci ratio: 1.462871e-01	ci left: 2.654448e-03	ci right 3.077208e-03	k: 715	n:250000
Cons ci ratio: 1.128413e-01	ci left: 4.532826e-03	ci right 5.078752e-03	k: 1200	n:250000
KS ci ratio: 2.672272e-02	ci left: 7.819201e-02	ci right 8.031376e-02	k: 19812	n:250000
C10orf71   250000 perm   89 sec   (2813 perm/sec)   p_kst 7.924800e-02   p_cons 4.800000e-03   p_joint 2.860000e-03

Joint ci ratio: 1.439942e-01	ci left: 2.637602e-03	ci right 3.050528e-03	k: 738	n:260000
Cons ci ratio: 1.107855e-01	ci left: 4.526722e-03	ci right 5.061332e-03	k: 1245	n:260000
KS ci ratio: 2.621451e-02	ci left: 7.815328e-02	ci right 8.023304e-02	k: 20589	n:260000
C10orf71   260000 perm   93 sec   (2784 perm/sec)   p_kst 7.918846e-02   p_cons 4.788462e-03   p_joint 2.838462e-03

Joint ci ratio: 1.538070e-01	ci left: 2.215381e-03	ci right 2.588021e-03	k: 647	n:270000
Cons ci ratio: 1.087959e-01	ci left: 4.524757e-03	ci right 5.048922e-03	k: 1291	n:270000
KS ci ratio: 2.574731e-02	ci left: 7.804414e-02	ci right 8.008343e-02	k: 21346	n:270000
C10orf71   270000 perm   98 sec   (2756 perm/sec)   p_kst 7.905926e-02   p_cons 4.781481e-03   p_joint 2.396296e-03

Joint ci ratio: 1.517159e-01	ci left: 2.198087e-03	ci right 2.562335e-03	k: 665	n:280000
Cons ci ratio: 1.065900e-01	ci left: 4.550825e-03	ci right 5.066650e-03	k: 1345	n:280000
KS ci ratio: 2.526579e-02	ci left: 7.816325e-02	ci right 8.016690e-02	k: 22165	n:280000
C10orf71   280000 perm   103 sec   (2726 perm/sec)   p_kst 7.916071e-02   p_cons 4.803571e-03   p_joint 2.375000e-03

Joint ci ratio: 1.528768e-01	ci left: 2.089113e-03	ci right 2.438194e-03	k: 655	n:290000
Cons ci ratio: 1.047766e-01	ci left: 4.551685e-03	ci right 5.058289e-03	k: 1392	n:290000
KS ci ratio: 2.481089e-02	ci left: 7.827105e-02	ci right 8.024082e-02	k: 22983	n:290000
C10orf71   290000 perm   107 sec   (2698 perm/sec)   p_kst 7.925172e-02   p_cons 4.800000e-03   p_joint 2.258621e-03

Joint ci ratio: 1.526496e-01	ci left: 2.025883e-03	ci right 2.363849e-03	k: 657	n:300000
Cons ci ratio: 1.026950e-01	ci left: 4.585036e-03	ci right 5.084603e-03	k: 1449	n:300000
KS ci ratio: 2.437970e-02	ci left: 7.837196e-02	ci right 8.030951e-02	k: 23801	n:300000
C10orf71   300000 perm   112 sec   (2671 perm/sec)   p_kst 7.933667e-02   p_cons 4.830000e-03   p_joint 2.190000e-03

Joint ci ratio: 1.499391e-01	ci left: 2.035021e-03	ci right 2.367943e-03	k: 681	n:310000
Cons ci ratio: 1.006321e-01	ci left: 4.625764e-03	ci right 5.119046e-03	k: 1509	n:310000
KS ci ratio: 2.396760e-02	ci left: 7.848267e-02	ci right 8.038971e-02	k: 24624	n:310000
C10orf71   310000 perm   117 sec   (2644 perm/sec)   p_kst 7.943226e-02   p_cons 4.867742e-03   p_joint 2.196774e-03

Joint ci ratio: 1.502759e-01	ci left: 1.962398e-03	ci right 2.284225e-03	k: 678	n:320000
Cons ci ratio: 9.945555e-02	ci left: 4.590890e-03	ci right 5.074395e-03	k: 1545	n:320000
KS ci ratio: 2.357570e-02	ci left: 7.858673e-02	ci right 8.046465e-02	k: 25447	n:320000
C10orf71   320000 perm   122 sec   (2618 perm/sec)   p_kst 7.952188e-02   p_cons 4.828125e-03   p_joint 2.118750e-03

Joint ci ratio: 1.500594e-01	ci left: 1.908761e-03	ci right 2.221299e-03	k: 680	n:330000
Cons ci ratio: 9.773130e-02	ci left: 4.614332e-03	ci right 5.091397e-03	k: 1600	n:330000
KS ci ratio: 2.319955e-02	ci left: 7.870279e-02	ci right 8.055308e-02	k: 26276	n:330000
C10orf71   330000 perm   127 sec   (2591 perm/sec)   p_kst 7.962424e-02   p_cons 4.848485e-03   p_joint 2.060606e-03

Joint ci ratio: 1.500640e-01	ci left: 1.852616e-03	ci right 2.155972e-03	k: 680	n:340000
Cons ci ratio: 9.644551e-02	ci left: 4.602014e-03	ci right 5.071192e-03	k: 1643	n:340000
KS ci ratio: 2.285504e-02	ci left: 7.872156e-02	ci right 8.054444e-02	k: 27074	n:340000
C10orf71   340000 perm   133 sec   (2566 perm/sec)   p_kst 7.962941e-02   p_cons 4.832353e-03   p_joint 2.000000e-03

Joint ci ratio: 1.485462e-01	ci left: 1.838189e-03	ci right 2.135867e-03	k: 694	n:350000
Cons ci ratio: 9.523753e-02	ci left: 4.587650e-03	ci right 5.049179e-03	k: 1685	n:350000
KS ci ratio: 2.252236e-02	ci left: 7.875934e-02	ci right 8.055620e-02	k: 27879	n:350000
C10orf71   350000 perm   138 sec   (2540 perm/sec)   p_kst 7.965429e-02   p_cons 4.814286e-03   p_joint 1.982857e-03

Joint ci ratio: 1.213197e-01	ci left: 2.716191e-03	ci right 3.069664e-03	k: 1040	n:360000
Cons ci ratio: 9.778185e-02	ci left: 4.227053e-03	ci right 4.664316e-03	k: 1599	n:360000
KS ci ratio: 2.219708e-02	ci left: 7.883942e-02	ci right 8.061180e-02	k: 28700	n:360000
C10orf71   360000 perm   143 sec   (2516 perm/sec)   p_kst 7.972222e-02   p_cons 4.441667e-03   p_joint 2.888889e-03

Joint ci ratio: 1.203430e-01	ci left: 2.687335e-03	ci right 3.034037e-03	k: 1057	n:370000
Cons ci ratio: 9.634685e-02	ci left: 4.239390e-03	ci right 4.671130e-03	k: 1647	n:370000
KS ci ratio: 2.190566e-02	ci left: 7.878089e-02	ci right 8.052841e-02	k: 29471	n:370000
C10orf71   370000 perm   149 sec   (2491 perm/sec)   p_kst 7.965135e-02   p_cons 4.451351e-03   p_joint 2.856757e-03

Joint ci ratio: 1.225750e-01	ci left: 2.519640e-03	ci right 2.851173e-03	k: 1019	n:380000
Cons ci ratio: 9.494513e-02	ci left: 4.253691e-03	ci right 4.680235e-03	k: 1696	n:380000
KS ci ratio: 2.160912e-02	ci left: 7.883556e-02	ci right 8.056033e-02	k: 30284	n:380000
C10orf71   380000 perm   154 sec   (2467 perm/sec)   p_kst 7.969474e-02   p_cons 4.463158e-03   p_joint 2.681579e-03

Joint ci ratio: 1.236163e-01	ci left: 2.412778e-03	ci right 2.733145e-03	k: 1002	n:390000
Cons ci ratio: 9.376482e-02	ci left: 4.252277e-03	ci right 4.673087e-03	k: 1739	n:390000
KS ci ratio: 2.132990e-02	ci left: 7.884931e-02	ci right 8.055181e-02	k: 31082	n:390000
C10orf71   390000 perm   160 sec   (2443 perm/sec)   p_kst 7.969744e-02   p_cons 4.458974e-03   p_joint 2.569231e-03

Joint ci ratio: 1.043214e-01	ci left: 3.333947e-03	ci right 3.703302e-03	k: 1406	n:400000
Cons ci ratio: 9.244536e-02	ci left: 4.268061e-03	ci right 4.684167e-03	k: 1789	n:400000
KS ci ratio: 2.106770e-02	ci left: 7.881772e-02	ci right 8.049837e-02	k: 31862	n:400000
C10orf71   400000 perm   165 sec   (2421 perm/sec)   p_kst 7.965500e-02   p_cons 4.472500e-03   p_joint 3.515000e-03

Joint ci ratio: 1.040664e-01	ci left: 3.269254e-03	ci right 3.630502e-03	k: 1413	n:410000
Cons ci ratio: 9.122989e-02	ci left: 4.278347e-03	ci right 4.689680e-03	k: 1837	n:410000
KS ci ratio: 2.048302e-02	ci left: 8.116435e-02	ci right 8.284644e-02	k: 33621	n:410000
C10orf71   410000 perm   171 sec   (2398 perm/sec)   p_kst 8.200244e-02   p_cons 4.480488e-03   p_joint 3.446341e-03

Joint ci ratio: 1.027307e-01	ci left: 3.277232e-03	ci right 3.634434e-03	k: 1450	n:420000
Cons ci ratio: 9.008513e-02	ci left: 4.285850e-03	ci right 4.692461e-03	k: 1884	n:420000
KS ci ratio: 2.023868e-02	ci left: 8.116720e-02	ci right 8.282905e-02	k: 34438	n:420000
C10orf71   420000 perm   177 sec   (2375 perm/sec)   p_kst 8.199524e-02   p_cons 4.485714e-03   p_joint 3.452381e-03

Joint ci ratio: 1.019622e-01	ci left: 3.250869e-03	ci right 3.602387e-03	k: 1472	n:430000
Cons ci ratio: 8.866030e-02	ci left: 4.324873e-03	ci right 4.728360e-03	k: 1945	n:430000
KS ci ratio: 2.000907e-02	ci left: 8.112373e-02	ci right 8.276563e-02	k: 35235	n:430000
C10orf71   430000 perm   183 sec   (2352 perm/sec)   p_kst 8.194186e-02   p_cons 4.523256e-03   p_joint 3.423256e-03

Joint ci ratio: 1.004051e-01	ci left: 3.278887e-03	ci right 3.627702e-03	k: 1518	n:440000
Cons ci ratio: 8.787462e-02	ci left: 4.304368e-03	ci right 4.702201e-03	k: 1980	n:440000
KS ci ratio: 1.977604e-02	ci left: 8.116605e-02	ci right 8.278946e-02	k: 36069	n:440000
C10orf71   440000 perm   189 sec   (2330 perm/sec)   p_kst 8.197500e-02   p_cons 4.500000e-03   p_joint 3.450000e-03

Joint ci ratio: 9.920388e-02	ci left: 3.286194e-03	ci right 3.631360e-03	k: 1555	n:450000
Cons ci ratio: 8.689324e-02	ci left: 4.306530e-03	ci right 4.699892e-03	k: 2025	n:450000
KS ci ratio: 1.955818e-02	ci left: 8.115129e-02	ci right 8.275632e-02	k: 36878	n:450000
C10orf71   450000 perm   195 sec   (2309 perm/sec)   p_kst 8.195111e-02   p_cons 4.500000e-03   p_joint 3.455556e-03

Outputting figure to mutsig2_images.part000000000018/C10orf71.4_4402_450000_0.081951_0.0045_0.0034556.png
                gene_name: C10orf71
               theta_stop: 0.099 
                    nperm: 450000 
                     p_ks: 0.082 
        ci_ks_bounds_left: 0.081 
       ci_ks_bounds_right: 0.083 
                   p_cons: 0.0045 
      ci_cons_bounds_left: 0.0043 
     ci_cons_bounds_right: 0.0047 
                  p_joint: 0.0035 
     ci_joint_bounds_left: 0.0033 
    ci_joint_bounds_right: 0.0036 

Current progress: 33 percent done.
C10orf90
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.428590e-02	ci left: 2.096447e-01	ci right 2.259200e-01	k: 2177	n:10000
Cons ci ratio: 1.635946e-02	ci left: 8.445820e-01	ci right 8.586125e-01	k: 8517	n:10000
KS ci ratio: 1.177918e-01	ci left: 9.379779e-02	ci right 1.056366e-01	k: 996	n:10000
C10orf90   10000 perm   2 sec   (6249 perm/sec)   p_kst 9.960000e-02   p_cons 8.517000e-01   p_joint 2.177000e-01

Joint ci ratio: 4.829939e-02	ci left: 2.417294e-01	ci right 2.537440e-01	k: 4954	n:20000
Cons ci ratio: 1.137422e-02	ci left: 8.509561e-01	ci right 8.607402e-01	k: 17118	n:20000
KS ci ratio: 8.249123e-02	ci left: 9.724970e-02	ci right 1.056666e-01	k: 2028	n:20000
C10orf90   20000 perm   4 sec   (5480 perm/sec)   p_kst 1.014000e-01   p_cons 8.559000e-01   p_joint 2.477000e-01

Outputting figure to mutsig2_images.part000000000018/C10orf90.3_2136_20000_0.1014_0.8559_0.2477.png
                gene_name: C10orf90
               theta_stop: 0.082 
                    nperm: 20000 
                     p_ks: 0.10 
        ci_ks_bounds_left: 0.097 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.85 
     ci_cons_bounds_right: 0.86 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.25 

Current progress: 67 percent done.
C10orf12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.902015e-02	ci left: 2.969755e-01	ci right 3.151376e-01	k: 3060	n:10000
Cons ci ratio: 9.600000e-02	ci left: 1.359974e-01	ci right 1.498113e-01	k: 1428	n:10000
KS ci ratio: 3.610965e-02	ci left: 5.310723e-01	ci right 5.507039e-01	k: 5409	n:10000
C10orf12   10000 perm   2 sec   (5136 perm/sec)   p_kst 5.409000e-01   p_cons 1.428000e-01   p_joint 3.060000e-01

Outputting figure to mutsig2_images.part000000000018/C10orf12.2_3748_10000_0.5409_0.1428_0.306.png
                gene_name: C10orf12
               theta_stop: 0.096 
                    nperm: 10000 
                     p_ks: 0.54 
        ci_ks_bounds_left: 0.53 
       ci_ks_bounds_right: 0.55 
                   p_cons: 0.14 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.15 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.32 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000018
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 18 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1528>
Subject: Job 8704120: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1528>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000019> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:35:04 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000019.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000019.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 19  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000019.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    241.22 sec.
    Max Memory :      5875 MB
    Max Swap   :      8528 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
19
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 19
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 19: processing genes 1629 - 1719
Calculating significance of each gene.
Using projection method.
1629	C11orf46	1
1630	C11orf48	1
1631	C11orf49	1
1632	C11orf51	1
1633	C11orf52	1
1634	C11orf53	1.196355e-01
1635	C11orf54	1
1636	C11orf57	1
1637	C11orf58	1
1638	C11orf59	1
1639	C11orf61	1
1640	C11orf63	3.867677e-02
1641	C11orf65	3.520441e-02
1642	C11orf66	1
1643	C11orf67	1
1644	C11orf68	1
1645	C11orf70	9.477115e-02
1646	C11orf71	1
1647	C11orf73	1
1648	C11orf74	8.336694e-02
1649	C11orf75	1
1650	C11orf80	1
1651	C11orf82	1
1652	C11orf83	1
1653	C11orf84	1
1654	C11orf85	1
1655	C11orf87	2.025020e-04
1656	C11orf88	1
1657	C11orf9	3.411399e-01
1658	C11orf92	1
1659	C11orf94	1
1660	C12orf10	1
1661	C12orf11	2.042752e-01
1662	C12orf12	1
1663	C12orf23	1
1664	C12orf24	1
1665	C12orf26	1
1666	C12orf29	1
1667	C12orf34	1.385631e-01
1668	C12orf35	1
1669	C12orf36	1
1670	C12orf39	1
1671	C12orf4	1
1672	C12orf40	1
1673	C12orf41	1
1674	C12orf42	1
1675	C12orf43	1
1676	C12orf44	7.312839e-02
1677	C12orf45	1
1678	C12orf48	2.734614e-02
1679	C12orf49	1
1680	C12orf5	1
1681	C12orf50	1
1682	C12orf51	4.071852e-01
1683	C12orf52	1
1684	C12orf53	1
1685	C12orf54	1
1686	C12orf56	1
1687	C12orf57	1
1688	C12orf59	1
1689	C12orf60	1
1690	C12orf61	1
1691	C12orf62	1
1692	C12orf63	1
1693	C12orf64	1
1694	C12orf65	1
1695	C12orf66	5.543832e-02
1696	C12orf68	1
1697	C12orf69	1
1698	C12orf71	3.415634e-02
1699	C12orf72	1
1700	C12orf74	1
1701	C12orf76	1
1702	C12orf77	1
1703	C13orf1	1
1704	C13orf15	1
1705	C13orf16	1
1706	C13orf18	1
1707	C13orf23	1.210354e-01
1708	C13orf26	1
1709	C13orf27	1
1710	C13orf28	1
1711	C13orf30	1
1712	C13orf31	1
1713	C13orf33	1
1714	C13orf34	1
1715	C13orf35	1
1716	C13orf36	1
1717	C13orf37	1
1718	C13orf39	1
1719	C14orf1	1
Done

Running MutSig 2:
Scatter job 19: processing genes 1629 - 1719
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C11orf87
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.278265e-02	ci left: 4.465016e-01	ci right 4.661239e-01	k: 4563	n:10000
KS ci ratio: 2.103697e-02	ci left: 7.681038e-01	ci right 7.845349e-01	k: 7764	n:10000
C11orf87   10000 perm   2 sec   (6216 perm/sec)   p_kst 7.764000e-01   p_cons 4.563000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000019/C11orf87.3_598_10000_0.7764_0.4563_1.png
                gene_name: C11orf87
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
C11orf63
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.555493e-02	ci left: 8.571254e-01	ci right 8.706618e-01	k: 8640	n:10000
Cons ci ratio: 6.249646e-03	ci left: 9.720660e-01	ci right 9.782530e-01	k: 9753	n:10000
KS ci ratio: 4.004989e-02	ci left: 4.793568e-01	ci right 4.990495e-01	k: 4892	n:10000
C11orf63   10000 perm   2 sec   (5803 perm/sec)   p_kst 4.892000e-01   p_cons 9.753000e-01   p_joint 8.640000e-01

Outputting figure to mutsig2_images.part000000000019/C11orf63.2_2433_10000_0.4892_0.9753_0.864.png
                gene_name: C11orf63
               theta_stop: 0.040 
                    nperm: 10000 
                     p_ks: 0.49 
        ci_ks_bounds_left: 0.48 
       ci_ks_bounds_right: 0.50 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.86 
     ci_joint_bounds_left: 0.86 
    ci_joint_bounds_right: 0.87 

Current progress: 67 percent done.
C12orf51
Processing conservation and coverage...
76% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.452473e-02	ci left: 5.533113e-01	ci right 5.728519e-01	k: 5631	n:10000
KS ci ratio: 1.540909e-02	ci left: 8.593708e-01	ci right 8.728151e-01	k: 8662	n:10000
C12orf51   10000 perm   4 sec   (2577 perm/sec)   p_kst 8.662000e-01   p_cons 5.631000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000019/C12orf51.2_13037_10000_0.8662_0.5631_1.png
                gene_name: C12orf51
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.86 
       ci_ks_bounds_right: 0.87 
                   p_cons: 0.56 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.57 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000019
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 19 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1429>
Subject: Job 8704122: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1429>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000020> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:35:23 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000020.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000020.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 20  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000020.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    279.23 sec.
    Max Memory :      6056 MB
    Max Swap   :      8480 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
20
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 20
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 20: processing genes 1720 - 1809
Calculating significance of each gene.
Using projection method.
1720	C14orf101	1
1721	C14orf102	1
1722	C14orf104	1
1723	C14orf105	1
1724	C14orf106	5.771565e-02
1725	C14orf109	5.897652e-02
1726	C14orf115	1
1727	C14orf118	1
1728	C14orf119	1
1729	C14orf126	1
1730	C14orf129	1
1731	C14orf135	3.717532e-02
1732	C14orf138	1
1733	C14orf142	1
1734	C14orf143	1
1735	C14orf145	2.190612e-01
1736	C14orf147	1.723830e-02
1737	C14orf148	1
1738	C14orf149	1
1739	C14orf153	1
1740	C14orf156	1
1741	C14orf159	1
In gene C14orf166 the following bins exceed PROBCAP:
    THCA-EL-A3CP-TP	categ 6	N = 702     n = 1	mu =   3.50e-08
1742	C14orf166	1.025193e-02
1743	C14orf166B	1
1744	C14orf169	1
1745	C14orf174	1.634855e-02
1746	C14orf177	1
1747	C14orf178	1
1748	C14orf179	1
1749	C14orf180	1
1750	C14orf181	1
1751	C14orf182	1
1752	C14orf183	1
1753	C14orf184	1
1754	C14orf2	1
1755	C14orf21	1
1756	C14orf28	1
1757	C14orf37	1
1758	C14orf39	1
1759	C14orf4	1
1760	C14orf43	1
1761	C14orf45	1
1762	C14orf49	2.847549e-01
1763	C14orf50	1
1764	C14orf68	1
1765	C14orf73	9.222765e-02
1766	C14orf79	1
1767	C14orf80	1
1768	C14orf93	1
1769	C15orf17	1
1770	C15orf2	1
1771	C15orf23	1
1772	C15orf24	1
1773	C15orf26	1
1774	C15orf27	1
1775	C15orf29	1
1776	C15orf32	1
1777	C15orf33	1
1778	C15orf38	1
1779	C15orf39	1.089934e-01
1780	C15orf40	1
1781	C15orf41	1
1782	C15orf42	3.570666e-01
1783	C15orf43	2.643751e-02
1784	C15orf44	1.737676e-01
1785	C15orf48	1
1786	C15orf52	2.271589e-02
1787	C15orf53	1
1788	C15orf54	7.572909e-03
1789	C15orf55	1.590700e-01
1790	C15orf56	1
1791	C15orf57	1
1792	C15orf58	1
1793	C15orf59	1
1794	C15orf60	1
1795	C15orf63	2.391629e-03
1796	C16orf11	1.222164e-01
1797	C16orf13	1
1798	C16orf3	1
1799	C16orf42	1
1800	C16orf45	1
1801	C16orf46	1
1802	C16orf48	5.206730e-02
1803	C16orf5	1
1804	C16orf53	1
1805	C16orf54	1
1806	C16orf55	1
1807	C16orf57	1
1808	C16orf58	1.337879e-01
1809	C16orf59	1
Done

Running MutSig 2:
Scatter job 20: processing genes 1720 - 1809
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C14orf106
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.173722e-02	ci left: 5.943354e-01	ci right 6.136040e-01	k: 6040	n:10000
KS ci ratio: 2.937825e-02	ci left: 6.308041e-01	ci right 6.497141e-01	k: 6403	n:10000
C14orf106   10000 perm   2 sec   (5043 perm/sec)   p_kst 6.403000e-01   p_cons 6.040000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000020/C14orf106.2_3463_10000_0.6403_0.604_1.png
                gene_name: C14orf106
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.64 
        ci_ks_bounds_left: 0.63 
       ci_ks_bounds_right: 0.65 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 20 percent done.
C14orf135
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.803364e-03	ci left: 9.827447e-01	ci right 9.875666e-01	k: 9853	n:10000
Cons ci ratio: 1.936165e-02	ci left: 7.959800e-01	ci right 8.116426e-01	k: 8039	n:10000
KS ci ratio: 1.475129e-02	ci left: 8.693806e-01	ci right 8.823995e-01	k: 8760	n:10000
C14orf135   10000 perm   2 sec   (5554 perm/sec)   p_kst 8.760000e-01   p_cons 8.039000e-01   p_joint 9.853000e-01

Outputting figure to mutsig2_images.part000000000020/C14orf135.2_2853_10000_0.876_0.8039_0.9853.png
                gene_name: C14orf135
               theta_stop: 0.019 
                    nperm: 10000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.80 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.81 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 40 percent done.
C14orf174
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.484613e-02	ci left: 8.679499e-01	ci right 8.810311e-01	k: 8746	n:10000
KS ci ratio: 2.878148e-02	ci left: 6.402572e-01	ci right 6.590556e-01	k: 6497	n:10000
C14orf174   10000 perm   2 sec   (5985 perm/sec)   p_kst 6.497000e-01   p_cons 8.746000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000020/C14orf174.2_2037_10000_0.6497_0.8746_1.png
                gene_name: C14orf174
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.65 
        ci_ks_bounds_left: 0.64 
       ci_ks_bounds_right: 0.66 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.88 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 60 percent done.
C15orf52
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.548400e-02	ci left: 6.938352e-01	ci right 7.118465e-01	k: 7029	n:10000
Cons ci ratio: 8.723287e-02	ci left: 1.606216e-01	ci right 1.753724e-01	k: 1679	n:10000
KS ci ratio: 2.066714e-02	ci left: 7.742826e-01	ci right 7.905526e-01	k: 7825	n:10000
C15orf52   10000 perm   2 sec   (5769 perm/sec)   p_kst 7.825000e-01   p_cons 1.679000e-01   p_joint 7.029000e-01

Outputting figure to mutsig2_images.part000000000020/C15orf52.2_1649_10000_0.7825_0.1679_0.7029.png
                gene_name: C15orf52
               theta_stop: 0.087 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.70 
     ci_joint_bounds_left: 0.69 
    ci_joint_bounds_right: 0.71 

Current progress: 80 percent done.
C15orf63
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.134966e-02	ci left: 3.586369e-01	ci right 3.776400e-01	k: 3681	n:10000
Cons ci ratio: 1.994172e-01	ci left: 3.348089e-02	ci right 4.099178e-02	k: 371	n:10000
KS ci ratio: 4.025877e-02	ci left: 4.767588e-01	ci right 4.964490e-01	k: 4866	n:10000
C15orf63   10000 perm   1 sec   (7128 perm/sec)   p_kst 4.866000e-01   p_cons 3.710000e-02   p_joint 3.681000e-01

Joint ci ratio: 4.111800e-02	ci left: 3.059794e-01	ci right 3.188752e-01	k: 6248	n:20000
Cons ci ratio: 1.433295e-01	ci left: 3.346084e-02	ci right 3.867516e-02	k: 720	n:20000
KS ci ratio: 2.849796e-02	ci left: 4.791506e-01	ci right 4.930534e-01	k: 9722	n:20000
C15orf63   20000 perm   3 sec   (6182 perm/sec)   p_kst 4.861000e-01   p_cons 3.600000e-02   p_joint 3.124000e-01

Joint ci ratio: 3.405138e-02	ci left: 3.011525e-01	ci right 3.116183e-01	k: 9191	n:30000
Cons ci ratio: 1.170009e-01	ci left: 3.395273e-02	ci right 3.820439e-02	k: 1081	n:30000
KS ci ratio: 2.327530e-02	ci left: 4.802959e-01	ci right 4.916402e-01	k: 14579	n:30000
C15orf63   30000 perm   5 sec   (5818 perm/sec)   p_kst 4.859667e-01   p_cons 3.603333e-02   p_joint 3.063667e-01

Joint ci ratio: 4.169932e-02	ci left: 1.771633e-01	ci right 1.847331e-01	k: 7237	n:40000
Cons ci ratio: 1.021244e-01	ci left: 3.370793e-02	ci right 3.735990e-02	k: 1420	n:40000
KS ci ratio: 2.005132e-02	ci left: 4.836898e-01	ci right 4.935118e-01	k: 19544	n:40000
C15orf63   40000 perm   7 sec   (5576 perm/sec)   p_kst 4.886000e-01   p_cons 3.550000e-02   p_joint 1.809250e-01

Joint ci ratio: 3.709572e-02	ci left: 1.791626e-01	ci right 1.859543e-01	k: 9127	n:50000
Cons ci ratio: 9.071609e-02	ci left: 3.436455e-02	ci right 3.764961e-02	k: 1799	n:50000
KS ci ratio: 1.797266e-02	ci left: 4.831496e-01	ci right 4.919319e-01	k: 24377	n:50000
C15orf63   50000 perm   9 sec   (5359 perm/sec)   p_kst 4.875400e-01   p_cons 3.598000e-02   p_joint 1.825400e-01

Outputting figure to mutsig2_images.part000000000020/C15orf63.2_406_50000_0.48754_0.03598_0.18254.png
                gene_name: C15orf63
               theta_stop: 0.091 
                    nperm: 50000 
                     p_ks: 0.49 
        ci_ks_bounds_left: 0.48 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.036 
      ci_cons_bounds_left: 0.034 
     ci_cons_bounds_right: 0.038 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.19 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000020
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 20 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1704>
Subject: Job 8704124: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1704>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000021> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:35:15 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000021.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000021.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 21  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000021.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    153.84 sec.
    Max Memory :      5671 MB
    Max Swap   :      8437 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
21
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 21
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 21: processing genes 1810 - 1900
Calculating significance of each gene.
Using projection method.
1810	C16orf61	1
In gene C16orf62 the following bins exceed PROBCAP:
    THCA-EL-A3TA-TP	categ 6	N = 3015    n = 1	mu =   1.04e-07
1811	C16orf62	1.912751e-01
1812	C16orf63	1
1813	C16orf68	1
1814	C16orf7	1
1815	C16orf70	7.022493e-02
1816	C16orf71	1
1817	C16orf72	3.744114e-02
1818	C16orf73	1
1819	C16orf74	1
1820	C16orf75	1
1821	C16orf78	1
1822	C16orf79	1
1823	C16orf80	5.633220e-02
1824	C16orf82	1
1825	C16orf86	1.114543e-01
1826	C16orf87	1
1827	C16orf88	1
1828	C16orf89	1
1829	C16orf90	1
1830	C16orf91	4.296306e-02
1831	C16orf92	1
1832	C16orf93	1
1833	C17orf100	1
1834	C17orf101	1
1835	C17orf102	1
1836	C17orf103	1
1837	C17orf104	1
1838	C17orf108	1
1839	C17orf28	4.103360e-02
1840	C17orf37	1
1841	C17orf39	1
1842	C17orf42	1
1843	C17orf46	1.109796e-01
1844	C17orf47	1
1845	C17orf48	1
1846	C17orf49	1
1847	C17orf53	1
1848	C17orf55	1
1849	C17orf56	1
1850	C17orf57	1
1851	C17orf58	1
1852	C17orf59	1
1853	C17orf60	1
1854	C17orf61	1
1855	C17orf62	1
1856	C17orf63	1
1857	C17orf64	1
1858	C17orf65	1
1859	C17orf66	8.296526e-02
1860	C17orf67	1
1861	C17orf68	1
1862	C17orf70	1
1863	C17orf71	1
1864	C17orf74	1
1865	C17orf75	1
1866	C17orf76	1
1867	C17orf77	1
1868	C17orf78	1
1869	C17orf79	1
1870	C17orf80	1
1871	C17orf81	1
1872	C17orf82	5.115210e-02
1873	C17orf85	3.211281e-02
1874	C17orf87	4.608809e-02
1875	C17orf90	1
1876	C17orf95	1
1877	C17orf98	1
1878	C18orf1	1
1879	C18orf10	1
1880	C18orf19	1
1881	C18orf21	1
1882	C18orf22	1
1883	C18orf25	1
1884	C18orf26	1
1885	C18orf32	1
1886	C18orf34	1
1887	C18orf45	1
1888	C18orf54	1
1889	C18orf55	1
1890	C18orf62	4.141281e-02
1891	C18orf8	1
1892	C19orf10	1
1893	C19orf12	1
1894	C19orf18	1
1895	C19orf2	1
1896	C19orf21	1
1897	C19orf22	1
1898	C19orf25	1
1899	C19orf26	1
1900	C19orf28	1
Done

Running MutSig 2:
Scatter job 21: processing genes 1810 - 1900
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C17orf28
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.017574e-03	ci left: 9.875220e-01	ci right 9.915852e-01	k: 9897	n:10000
Cons ci ratio: 5.173814e-02	ci left: 3.551569e-01	ci right 3.741220e-01	k: 3646	n:10000
KS ci ratio: 2.600354e-02	ci left: 6.852655e-01	ci right 7.034211e-01	k: 6944	n:10000
C17orf28   10000 perm   2 sec   (4386 perm/sec)   p_kst 6.944000e-01   p_cons 3.646000e-01   p_joint 9.897000e-01

Outputting figure to mutsig2_images.part000000000021/C17orf28.2_2443_10000_0.6944_0.3646_0.9897.png
                gene_name: C17orf28
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.69 
        ci_ks_bounds_left: 0.69 
       ci_ks_bounds_right: 0.70 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000021
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 21 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1431>
Subject: Job 8704125: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1431>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000022> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:35:09 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000022.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000022.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 22  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000022.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    234.25 sec.
    Max Memory :      5662 MB
    Max Swap   :      8300 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
22
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 22
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 22: processing genes 1901 - 1990
Calculating significance of each gene.
Using projection method.
1901	C19orf29	1.900020e-01
1902	C19orf33	1
1903	C19orf35	1.400606e-03
1904	C19orf36	1
1905	C19orf39	1
1906	C19orf40	1
1907	C19orf41	1
1908	C19orf42	1
1909	C19orf43	1
1910	C19orf44	1
1911	C19orf45	1
1912	C19orf46	1
1913	C19orf47	1
1914	C19orf48	1
1915	C19orf50	1
1916	C19orf51	1
1917	C19orf52	1
1918	C19orf53	1
1919	C19orf54	1
1920	C19orf55	1
1921	C19orf56	1
1922	C19orf57	1.526983e-01
1923	C19orf59	1
1924	C19orf6	1
1925	C19orf61	1
1926	C19orf62	1
1927	C19orf63	1
1928	C19orf66	1
1929	C19orf70	1
1930	C19orf73	1
1931	C19orf75	1
1932	C1D	1
1933	C1GALT1	1.118405e-01
1934	C1GALT1C1	1
1935	C1QA	5.868793e-02
1936	C1QB	1
1937	C1QBP	1
1938	C1QC	1
1939	C1QL1	1
1940	C1QL2	1
1941	C1QL3	1
1942	C1QL4	1
1943	C1QTNF1	1
1944	C1QTNF2	1
1945	C1QTNF3	1
1946	C1QTNF4	1
1947	C1QTNF5	1
1948	C1QTNF6	1
1949	C1QTNF7	1
1950	C1QTNF8	1
1951	C1QTNF9	1
1952	C1QTNF9B	1
1953	C1R	1
1954	C1RL	1
1955	C1S	1
1956	C1orf100	1
1957	C1orf101	1.952927e-01
1958	C1orf103	1
1959	C1orf104	1
1960	C1orf105	1
1961	C1orf106	1
1962	C1orf107	1
1963	C1orf109	1
1964	C1orf110	1.292990e-01
1965	C1orf111	1
1966	C1orf112	7.753276e-02
1967	C1orf113	3.853652e-02
1968	C1orf114	1
1969	C1orf115	1
1970	C1orf116	1
1971	C1orf122	1
1972	C1orf123	1
1973	C1orf124	1
1974	C1orf125	1
1975	C1orf127	1
1976	C1orf128	1
1977	C1orf129	1
1978	C1orf130	1
In gene C1orf131 the following bins exceed PROBCAP:
    THCA-BJ-A18Z-TP	categ 6	N = 910     n = 1	mu =   6.95e-08
1979	C1orf131	2.882254e-02
1980	C1orf135	1
1981	C1orf14	1
1982	C1orf141	4.923791e-02
1983	C1orf144	1
1984	C1orf146	1
1985	C1orf150	1
1986	C1orf151	1
1987	C1orf156	1
1988	C1orf158	1
1989	C1orf159	1
1990	C1orf161	1
Done

Running MutSig 2:
Scatter job 22: processing genes 1901 - 1990
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C19orf35
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.240477e-01	ci left: 2.636581e-02	ci right 3.311184e-02	k: 296	n:10000
Cons ci ratio: 2.601440e-01	ci left: 1.930852e-02	ci right 2.517438e-02	k: 221	n:10000
KS ci ratio: 1.134190e-01	ci left: 1.006167e-01	ci right 1.128135e-01	k: 1066	n:10000
C19orf35   10000 perm   2 sec   (5863 perm/sec)   p_kst 1.066000e-01   p_cons 2.210000e-02   p_joint 2.960000e-02

Joint ci ratio: 1.852381e-01	ci left: 1.986864e-02	ci right 2.397200e-02	k: 437	n:20000
Cons ci ratio: 1.810558e-01	ci left: 2.082370e-02	ci right 2.501659e-02	k: 457	n:20000
KS ci ratio: 8.007495e-02	ci left: 1.026992e-01	ci right 1.113154e-01	k: 2139	n:20000
C19orf35   20000 perm   7 sec   (2749 perm/sec)   p_kst 1.069500e-01   p_cons 2.285000e-02   p_joint 2.185000e-02

Joint ci ratio: 1.535327e-01	ci left: 1.963185e-02	ci right 2.292844e-02	k: 637	n:30000
Cons ci ratio: 1.521975e-01	ci left: 1.998476e-02	ci right 2.330878e-02	k: 648	n:30000
KS ci ratio: 6.542699e-02	ci left: 1.033594e-01	ci right 1.103836e-01	k: 3205	n:30000
C19orf35   30000 perm   9 sec   (3194 perm/sec)   p_kst 1.068333e-01   p_cons 2.160000e-02   p_joint 2.123333e-02

Joint ci ratio: 2.285590e-01	ci left: 6.465611e-03	ci right 8.157099e-03	k: 291	n:40000
Cons ci ratio: 1.332575e-01	ci left: 1.976230e-02	ci right 2.260780e-02	k: 846	n:40000
KS ci ratio: 5.662208e-02	ci left: 1.039622e-01	ci right 1.100450e-01	k: 4279	n:40000
C19orf35   40000 perm   12 sec   (3456 perm/sec)   p_kst 1.069750e-01   p_cons 2.115000e-02   p_joint 7.275000e-03

Joint ci ratio: 1.578745e-01	ci left: 1.121774e-02	ci right 1.315952e-02	k: 608	n:50000
Cons ci ratio: 1.189458e-01	ci left: 1.999405e-02	ci right 2.254195e-02	k: 1062	n:50000
KS ci ratio: 5.052289e-02	ci left: 1.047385e-01	ci right 1.101872e-01	k: 5372	n:50000
C19orf35   50000 perm   14 sec   (3613 perm/sec)   p_kst 1.074400e-01   p_cons 2.124000e-02   p_joint 1.216000e-02

Joint ci ratio: 1.217519e-01	ci left: 1.594838e-02	ci right 1.803205e-02	k: 1018	n:60000
Cons ci ratio: 9.922986e-02	ci left: 2.409068e-02	ci right 2.662218e-02	k: 1520	n:60000
KS ci ratio: 4.623591e-02	ci left: 1.045043e-01	ci right 1.094671e-01	k: 6418	n:60000
C19orf35   60000 perm   16 sec   (3707 perm/sec)   p_kst 1.069667e-01   p_cons 2.533333e-02   p_joint 1.696667e-02

Joint ci ratio: 1.126643e-01	ci left: 1.604139e-02	ci right 1.797037e-02	k: 1189	n:70000
Cons ci ratio: 9.236429e-02	ci left: 2.392583e-02	ci right 2.625662e-02	k: 1755	n:70000
KS ci ratio: 4.270673e-02	ci left: 1.051297e-01	ci right 1.097315e-01	k: 7519	n:70000
C19orf35   70000 perm   19 sec   (3758 perm/sec)   p_kst 1.074143e-01   p_cons 2.507143e-02   p_joint 1.698571e-02

Joint ci ratio: 1.090334e-01	ci left: 1.503237e-02	ci right 1.677799e-02	k: 1271	n:80000
Cons ci ratio: 8.632964e-02	ci left: 2.403926e-02	ci right 2.622037e-02	k: 2009	n:80000
KS ci ratio: 4.000404e-02	ci left: 1.050147e-01	ci right 1.093138e-01	k: 8572	n:80000
C19orf35   80000 perm   21 sec   (3777 perm/sec)   p_kst 1.071500e-01   p_cons 2.511250e-02   p_joint 1.588750e-02

Joint ci ratio: 1.049421e-01	ci left: 1.446489e-02	ci right 1.607768e-02	k: 1373	n:90000
Cons ci ratio: 8.173137e-02	ci left: 2.390266e-02	ci right 2.595034e-02	k: 2242	n:90000
KS ci ratio: 3.777461e-02	ci left: 1.048444e-01	ci right 1.088921e-01	k: 9617	n:90000
C19orf35   90000 perm   24 sec   (3783 perm/sec)   p_kst 1.068556e-01   p_cons 2.491111e-02   p_joint 1.525556e-02

Joint ci ratio: 9.866372e-02	ci left: 1.477271e-02	ci right 1.631557e-02	k: 1553	n:100000
Cons ci ratio: 7.774900e-02	ci left: 2.382531e-02	ci right 2.576239e-02	k: 2478	n:100000
KS ci ratio: 3.582615e-02	ci left: 1.050013e-01	ci right 1.088416e-01	k: 10691	n:100000
C19orf35   100000 perm   26 sec   (3776 perm/sec)   p_kst 1.069100e-01   p_cons 2.478000e-02   p_joint 1.553000e-02

Outputting figure to mutsig2_images.part000000000022/C19orf35.2_1434_100000_0.10691_0.02478_0.01553.png
                gene_name: C19orf35
               theta_stop: 0.099 
                    nperm: 100000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.025 
      ci_cons_bounds_left: 0.024 
     ci_cons_bounds_right: 0.026 
                  p_joint: 0.016 
     ci_joint_bounds_left: 0.015 
    ci_joint_bounds_right: 0.016 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000022
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 22 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1645>
Subject: Job 8704126: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1645>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000023> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:33:52 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000023.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000023.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 23  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000023.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    144.61 sec.
    Max Memory :      3403 MB
    Max Swap   :      6217 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
23
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 23
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 23: processing genes 1991 - 2081
Calculating significance of each gene.
Using projection method.
1991	C1orf162	1
1992	C1orf163	1
1993	C1orf168	1
1994	C1orf172	1
1995	C1orf173	1
1996	C1orf174	1
1997	C1orf175	1
1998	C1orf177	1
1999	C1orf182	1
2000/18093 2000	C1orf183	1
2001	C1orf186	1
2002	C1orf187	1
2003	C1orf189	1
2004	C1orf190	1
2005	C1orf192	1
2006	C1orf194	1
2007	C1orf198	1
2008	C1orf201	1
2009	C1orf21	1
2010	C1orf210	3.983507e-02
2011	C1orf213	2.733194e-02
2012	C1orf216	1
2013	C1orf226	1
2014	C1orf227	1
2015	C1orf25	1
2016	C1orf26	1
2017	C1orf27	1
2018	C1orf31	1
2019	C1orf35	1
2020	C1orf38	1
2021	C1orf43	1
2022	C1orf49	1
2023	C1orf50	1
2024	C1orf51	1
2025	C1orf52	1
2026	C1orf53	1
2027	C1orf54	1
2028	C1orf55	1
2029	C1orf56	1
2030	C1orf57	1
2031	C1orf58	1
2032	C1orf59	1
2033	C1orf61	1
2034	C1orf63	1
2035	C1orf64	1
2036	C1orf65	1
2037	C1orf66	1
2038	C1orf69	1
2039	C1orf74	1
2040	C1orf77	1
2041	C1orf83	1
2042	C1orf84	1
2043	C1orf85	1
2044	C1orf86	1
2045	C1orf87	1
2046	C1orf88	1
2047	C1orf89	1
2048	C1orf9	1
2049	C1orf91	1
2050	C1orf92	1
2051	C1orf93	1
2052	C1orf94	1
2053	C1orf95	1
2054	C1orf96	1
2055	C2	1
2056	C20orf103	1.082843e-01
2057	C20orf106	1
2058	C20orf107	1
2059	C20orf108	1
2060	C20orf11	1
2061	C20orf111	1
2062	C20orf112	1
2063	C20orf114	1
2064	C20orf117	1
2065	C20orf118	1
2066	C20orf12	1
2067	C20orf132	1
2068	C20orf134	1
2069	C20orf135	1
2070	C20orf141	1
In gene C20orf144 the following bins exceed PROBCAP:
    THCA-FK-A3SE-TP	categ 6	N = 131     n = 1	mu =   1.00e-07
2071	C20orf144	5.056115e-03
2072	C20orf151	7.458087e-02
2073	C20orf152	1
2074	C20orf160	1
2075	C20orf165	5.693723e-02
2076	C20orf166	1
2077	C20orf177	1
2078	C20orf185	1
2079	C20orf186	1
2080	C20orf194	1
2081	C20orf195	1
Done

Running MutSig 2:
Scatter job 23: processing genes 1991 - 2081
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000023
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 23 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1652>
Subject: Job 8704128: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1652>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000024> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:34:04 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000024.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000024.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 24  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000024.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    158.23 sec.
    Max Memory :      4666 MB
    Max Swap   :      7485 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
24
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 24
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 24: processing genes 2082 - 2171
Calculating significance of each gene.
Using projection method.
2082	C20orf196	1
2083	C20orf197	4.893555e-02
2084	C20orf20	1
2085	C20orf24	1
2086	C20orf26	1
2087	C20orf27	1
2088	C20orf29	1
2089	C20orf3	1
2090	C20orf30	1
2091	C20orf4	1
2092	C20orf43	1
2093	C20orf46	1
2094	C20orf54	1
2095	C20orf7	1
2096	C20orf70	1
2097	C20orf71	1
2098	C20orf72	1
2099	C20orf79	1
2100	C20orf85	3.009700e-02
2101	C20orf94	1
2102	C20orf96	1
2103	C21orf2	1
2104	C21orf29	1
2105	C21orf33	1
2106	C21orf45	1
2107	C21orf56	1
2108	C21orf57	1
2109	C21orf58	1
2110	C21orf59	1
2111	C21orf63	1
2112	C21orf7	1
2113	C21orf70	1
2114	C21orf91	1
2115	C22orf13	1
2116	C22orf15	1
2117	C22orf23	1
2118	C22orf24	1
2119	C22orf25	1
2120	C22orf28	1
2121	C22orf29	1
2122	C22orf31	7.979138e-02
2123	C22orf32	1
2124	C22orf33	1
2125	C22orf36	1
2126	C22orf39	1
2127	C22orf40	1
2128	C22orf42	1
2129	C22orf43	1
2130	C22orf9	1
2131	C2CD2	1
2132	C2CD2L	1
2133	C2CD3	5.448064e-01
2134	C2CD4A	1
2135	C2orf15	1
2136	C2orf16	1
2137	C2orf18	1
2138	C2orf24	1
2139	C2orf28	1
2140	C2orf29	1
2141	C2orf3	1
2142	C2orf34	1
2143	C2orf39	1
2144	C2orf40	1
2145	C2orf42	1
2146	C2orf43	1
2147	C2orf44	1
2148	C2orf47	1
2149	C2orf48	1
2150	C2orf49	1
2151	C2orf50	1
2152	C2orf51	1
2153	C2orf53	1
2154	C2orf54	1
2155	C2orf55	1
2156	C2orf56	1
2157	C2orf57	1
2158	C2orf60	1
2159	C2orf61	1
2160	C2orf62	1
2161	C2orf63	1
2162	C2orf64	1
2163	C2orf65	1
2164	C2orf66	1
2165	C2orf67	1
2166	C2orf68	1
2167	C2orf69	1
2168	C2orf7	1
2169	C2orf70	1
2170	C2orf71	1
2171	C2orf73	1
Done

Running MutSig 2:
Scatter job 24: processing genes 2082 - 2171
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000024
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 24 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1711>
Subject: Job 8704129: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1711>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000025> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:34:13 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000025.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000025.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 25  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000025.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    159.91 sec.
    Max Memory :      4689 MB
    Max Swap   :      7472 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
25
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 25
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 25: processing genes 2172 - 2262
Calculating significance of each gene.
Using projection method.
2172	C2orf76	1
2173	C2orf77	1
2174	C2orf78	9.011213e-02
2175	C2orf79	1
2176	C2orf80	1
2177	C2orf83	1.324092e-02
2178	C2orf84	1
2179	C2orf85	1
2180	C2orf86	1
2181	C2orf88	1
2182	C2orf89	1
2183	C3	4.594861e-01
2184	C3AR1	1
2185	C3orf1	1
2186	C3orf10	1
2187	C3orf14	1
2188	C3orf15	7.213769e-03
2189	C3orf17	1
2190	C3orf18	1
2191	C3orf19	3.688348e-02
2192	C3orf20	1
2193	C3orf21	1
2194	C3orf22	1
2195	C3orf23	1
2196	C3orf24	1
2197	C3orf26	1
2198	C3orf27	1
2199	C3orf30	1
2200	C3orf31	1
2201	C3orf32	1
2202	C3orf33	1
2203	C3orf34	1
2204	C3orf35	1
2205	C3orf36	1
2206	C3orf37	1
2207	C3orf38	1
2208	C3orf39	1
2209	C3orf43	1
2210	C3orf45	1
2211	C3orf52	1
2212	C3orf54	1
2213	C3orf55	1
2214	C3orf57	1
2215	C3orf58	1.622847e-01
2216	C3orf59	1
2217	C3orf62	1
2218	C3orf63	1
2219	C3orf64	1
2220	C3orf67	1
2221	C3orf70	1
2222	C3orf71	6.680489e-02
2223	C3orf72	1
2224	C3orf75	1
2225	C3orf79	1
2226	C4BPA	8.779377e-02
2227	C4BPB	1
2228	C4orf14	1
2229	C4orf17	1
2230	C4orf19	1
2231	C4orf21	1
2232	C4orf22	4.226946e-02
2233	C4orf23	1
2234	C4orf26	1
2235	C4orf27	1
2236	C4orf29	1
2237	C4orf3	1
2238	C4orf31	1
2239	C4orf32	1
2240	C4orf33	1
2241	C4orf34	1
2242	C4orf35	1
2243	C4orf36	1
2244	C4orf37	1
2245	C4orf39	1
2246	C4orf40	6.458109e-02
2247	C4orf41	1
2248	C4orf43	1
2249	C4orf44	1
2250	C4orf45	1
2251	C4orf46	1
2252	C4orf49	1
2253	C4orf50	1
2254	C4orf51	1
2255	C4orf6	1
2256	C4orf7	1
2257	C5	1.891097e-01
2258	C5AR1	1
2259	C5orf13	1
2260	C5orf15	1
2261	C5orf20	1
2262	C5orf22	1
Done

Running MutSig 2:
Scatter job 25: processing genes 2172 - 2262
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C3orf15
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.753408e-02	ci left: 3.950588e-01	ci right 4.143968e-01	k: 4047	n:10000
KS ci ratio: 1.038389e-02	ci left: 9.294731e-01	ci right 9.392720e-01	k: 9345	n:10000
C3orf15   10000 perm   2 sec   (5688 perm/sec)   p_kst 9.345000e-01   p_cons 4.047000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000025/C3orf15.2_2372_10000_0.9345_0.4047_1.png
                gene_name: C3orf15
               theta_stop: 0.048 
                    nperm: 10000 
                     p_ks: 0.93 
        ci_ks_bounds_left: 0.93 
       ci_ks_bounds_right: 0.94 
                   p_cons: 0.40 
      ci_cons_bounds_left: 0.40 
     ci_cons_bounds_right: 0.41 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000025
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 25 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1643>
Subject: Job 8704131: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1643>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000026> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:34:37 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000026.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000026.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 26  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000026.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    179.33 sec.
    Max Memory :      5725 MB
    Max Swap   :      8510 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
26
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 26
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 26: processing genes 2263 - 2352
Calculating significance of each gene.
Using projection method.
2263	C5orf23	1
2264	C5orf24	1
2265	C5orf25	1
2266	C5orf28	1
2267	C5orf30	1
2268	C5orf32	1
2269	C5orf33	1
2270	C5orf34	1
2271	C5orf35	1
2272	C5orf38	1
2273	C5orf39	1
2274	C5orf4	1
2275	C5orf40	1
2276	C5orf41	1
2277	C5orf42	1.205857e-01
2278	C5orf43	1
2279	C5orf44	1
2280	C5orf45	1
2281	C5orf46	1
2282	C5orf48	1
2283	C5orf49	1
2284	C5orf51	1
2285	C5orf53	1
2286	C5orf54	1
2287	C5orf55	1
2288	C5orf56	1
2289	C5orf58	1
2290	C5orf62	1
2291	C6	1
2292	C6orf1	1
2293	C6orf10	1
2294	C6orf105	1
2295	C6orf106	1
2296	C6orf108	1
2297	C6orf114	1
2298	C6orf115	1
2299	C6orf118	1
2300	C6orf120	1
2301	C6orf125	2.487899e-02
2302	C6orf126	1
2303	C6orf127	1
2304	C6orf129	1
2305	C6orf130	1
2306	C6orf134	1
2307	C6orf136	6.064895e-02
2308	C6orf138	5.322840e-02
2309	C6orf142	1.705493e-01
2310	C6orf145	1
2311	C6orf146	1.427880e-01
2312	C6orf15	1
2313	C6orf150	1
2314	C6orf153	1
2315	C6orf154	1
2316	C6orf162	1
2317	C6orf165	1
2318	C6orf167	1
2319	C6orf168	1
2320	C6orf170	1
2321	C6orf174	2.102489e-01
2322	C6orf182	1
2323	C6orf186	1
2324	C6orf191	1
2325	C6orf192	1
2326	C6orf195	1
2327	C6orf201	1
2328	C6orf203	1
2329	C6orf204	1
2330	C6orf211	1.503164e-01
2331	C6orf221	1.067309e-01
2332	C6orf222	1
2333	C6orf223	1
2334	C6orf225	1
2335	C6orf226	1
2336	C6orf25	1
2337	C6orf26	1
2338	C6orf27	1
2339	C6orf35	1
2340	C6orf47	6.366370e-02
2341	C6orf48	1
2342	C6orf57	1
2343	C6orf58	1
2344	C6orf62	1
2345	C6orf64	1
2346	C6orf70	1
2347	C6orf72	1
2348	C6orf81	1
In gene C6orf89 the following bins exceed PROBCAP:
    THCA-ET-A3BW-TP	categ 5	N = 1091    n = 1	mu =   6.84e-08
2349	C6orf89	3.452903e-02
2350	C6orf97	5.435519e-03
2351	C7	2.682774e-02
2352	C7orf10	1
Done

Running MutSig 2:
Scatter job 26: processing genes 2263 - 2352
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C5orf42
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.384107e-02	ci left: 4.344288e-01	ci right 4.540037e-01	k: 4442	n:10000
Cons ci ratio: 6.832654e-03	ci left: 9.670990e-01	ci right 9.738232e-01	k: 9706	n:10000
KS ci ratio: 1.125355e-01	ci left: 1.020789e-01	ci right 1.143503e-01	k: 1081	n:10000
C5orf42   10000 perm   3 sec   (3788 perm/sec)   p_kst 1.081000e-01   p_cons 9.706000e-01   p_joint 4.442000e-01

Joint ci ratio: 3.547754e-02	ci left: 3.722694e-01	ci right 3.857657e-01	k: 7580	n:20000
Cons ci ratio: 4.686631e-03	ci left: 9.698788e-01	ci right 9.744826e-01	k: 19445	n:20000
KS ci ratio: 7.990779e-02	ci left: 1.030921e-01	ci right 1.117224e-01	k: 2147	n:20000
C5orf42   20000 perm   9 sec   (2126 perm/sec)   p_kst 1.073500e-01   p_cons 9.722500e-01   p_joint 3.790000e-01

Outputting figure to mutsig2_images.part000000000026/C5orf42.2_9798_20000_0.10735_0.97225_0.379.png
                gene_name: C5orf42
               theta_stop: 0.080 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.10 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.97 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.97 
                  p_joint: 0.38 
     ci_joint_bounds_left: 0.37 
    ci_joint_bounds_right: 0.39 

Current progress: 25 percent done.
C6orf138
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.145934e-02	ci left: 5.985520e-01	ci right 6.177849e-01	k: 6082	n:10000
KS ci ratio: 3.725154e-02	ci left: 5.155566e-01	ci right 5.352286e-01	k: 5254	n:10000
C6orf138   10000 perm   2 sec   (5978 perm/sec)   p_kst 5.254000e-01   p_cons 6.082000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000026/C6orf138.2_2553_10000_0.5254_0.6082_1.png
                gene_name: C6orf138
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.53 
        ci_ks_bounds_left: 0.52 
       ci_ks_bounds_right: 0.54 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
C6orf97
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.546088e-02	ci left: 2.044183e-01	ci right 2.205496e-01	k: 2124	n:10000
Cons ci ratio: 8.658327e-02	ci left: 1.626846e-01	ci right 1.775081e-01	k: 1700	n:10000
KS ci ratio: 3.998584e-02	ci left: 4.801563e-01	ci right 4.998496e-01	k: 4900	n:10000
C6orf97   10000 perm   2 sec   (6073 perm/sec)   p_kst 4.900000e-01   p_cons 1.700000e-01   p_joint 2.124000e-01

Outputting figure to mutsig2_images.part000000000026/C6orf97.2_2192_10000_0.49_0.17_0.2124.png
                gene_name: C6orf97
               theta_stop: 0.087 
                    nperm: 10000 
                     p_ks: 0.49 
        ci_ks_bounds_left: 0.48 
       ci_ks_bounds_right: 0.50 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.21 
     ci_joint_bounds_left: 0.20 
    ci_joint_bounds_right: 0.22 

Current progress: 75 percent done.
C7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.223756e-03	ci left: 9.722779e-01	ci right 9.784409e-01	k: 9755	n:10000
Cons ci ratio: 5.655754e-02	ci left: 3.152266e-01	ci right 3.336757e-01	k: 3244	n:10000
KS ci ratio: 1.243716e-02	ci left: 9.027822e-01	ci right 9.141786e-01	k: 9086	n:10000
C7   10000 perm   2 sec   (5547 perm/sec)   p_kst 9.086000e-01   p_cons 3.244000e-01   p_joint 9.755000e-01

Outputting figure to mutsig2_images.part000000000026/C7.2_2604_10000_0.9086_0.3244_0.9755.png
                gene_name: C7
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.90 
       ci_ks_bounds_right: 0.91 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.32 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.98 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000026
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 26 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1430>
Subject: Job 8704132: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1430>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000027> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:45:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000027.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000027.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 27  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000027.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    991.81 sec.
    Max Memory :      5714 MB
    Max Swap   :      8404 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
27
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 27
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 27: processing genes 2353 - 2443
Calculating significance of each gene.
Using projection method.
2353	C7orf11	1
2354	C7orf16	1
2355	C7orf23	1
2356	C7orf25	1.750126e-01
2357	C7orf26	1
2358	C7orf27	1
2359	C7orf28A	1
2360	C7orf28B	1
2361	C7orf29	1
2362	C7orf30	1
2363	C7orf31	1
2364	C7orf33	6.151568e-02
2365	C7orf34	1
2366	C7orf36	1
2367	C7orf41	1
2368	C7orf42	1
2369	C7orf43	1
2370	C7orf44	1
2371	C7orf45	1
2372	C7orf46	1
2373	C7orf47	1
2374	C7orf49	1
2375	C7orf50	1
2376	C7orf51	2.507753e-01
2377	C7orf52	1
2378	C7orf53	1
2379	C7orf55	1
2380	C7orf57	1.629886e-02
2381	C7orf58	1
2382	C7orf59	1
2383	C7orf60	1
2384	C7orf61	1
2385	C7orf63	1
2386	C7orf64	1
2387	C7orf65	1
2388	C7orf66	1
2389	C7orf68	1
2390	C7orf69	1
2391	C7orf70	1
2392	C8A	1
2393	C8B	1
2394	C8G	1
2395	C8orf22	1
2396	C8orf31	1
2397	C8orf33	1
2398	C8orf34	2.165446e-02
2399	C8orf37	1
2400	C8orf38	1
2401	C8orf4	1
2402	C8orf40	1
2403	C8orf41	1
2404	C8orf42	1
2405	C8orf44	1
2406	C8orf45	1
2407	C8orf46	1
2408	C8orf47	1
2409	C8orf58	1
2410	C8orf59	1
2411	C8orf73	1
2412	C8orf74	1
2413	C8orf76	1
2414	C8orf79	1
2415	C8orf80	1
2416	C8orf84	1
2417	C8orf85	1
2418	C8orf86	1
2419	C9	1
2420	C9orf100	1
2421	C9orf102	1
2422	C9orf103	1
2423	C9orf106	1.179545e-02
2424	C9orf11	1
In gene C9orf114 the following bins exceed PROBCAP:
    THCA-BJ-A18Y-TP	categ 6	N = 1015    n = 1	mu =   1.74e-07
2425	C9orf114	9.592028e-02
2426	C9orf116	6.139101e-02
2427	C9orf117	1
2428	C9orf119	1
2429	C9orf123	1
2430	C9orf125	1
2431	C9orf128	1
2432	C9orf129	1
2433	C9orf131	1
2434	C9orf135	1
2435	C9orf139	1
2436	C9orf142	1
In gene C9orf150 the following bins exceed PROBCAP:
    THCA-BJ-A190-TP	categ 6	N = 522     n = 1	mu =   1.71e-07
2437	C9orf150	1.573647e-03
2438	C9orf152	1
2439	C9orf153	1
2440	C9orf156	1
2441	C9orf16	1
2442	C9orf163	1
2443	C9orf170	1
Done

Running MutSig 2:
Scatter job 27: processing genes 2353 - 2443
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
C9orf150
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.428867e-01	ci left: 1.068957e-02	ci right 1.520079e-02	k: 128	n:10000
Cons ci ratio: 5.395232e-03	ci left: 9.786643e-01	ci right 9.840501e-01	k: 9815	n:10000
KS ci ratio: 8.756181e-01	ci left: 1.144300e-03	ci right 2.965502e-03	k: 19	n:10000
C9orf150   10000 perm   1 sec   (6900 perm/sec)   p_kst 1.900000e-03   p_cons 9.815000e-01   p_joint 1.280000e-02

Joint ci ratio: 3.039027e-01	ci left: 6.997074e-03	ci right 9.548992e-03	k: 164	n:20000
Cons ci ratio: 3.752294e-03	ci left: 9.801133e-01	ci right 9.838447e-01	k: 19641	n:20000
KS ci ratio: 6.716860e-01	ci left: 1.136048e-03	ci right 2.316440e-03	k: 33	n:20000
C9orf150   20000 perm   6 sec   (3168 perm/sec)   p_kst 1.650000e-03   p_cons 9.820500e-01   p_joint 8.200000e-03

Joint ci ratio: 4.646599e-01	ci left: 1.819386e-03	ci right 2.947120e-03	k: 70	n:30000
Cons ci ratio: 3.138142e-03	ci left: 9.795643e-01	ci right 9.826748e-01	k: 29435	n:30000
KS ci ratio: 5.539003e-01	ci left: 1.208586e-03	ci right 2.158785e-03	k: 49	n:30000
C9orf150   30000 perm   8 sec   (3620 perm/sec)   p_kst 1.633333e-03   p_cons 9.811667e-01   p_joint 2.333333e-03

Joint ci ratio: 1.988155e-01	ci left: 8.667670e-03	ci right 1.060452e-02	k: 384	n:40000
Cons ci ratio: 2.687019e-03	ci left: 9.802091e-01	ci right 9.828704e-01	k: 39263	n:40000
KS ci ratio: 5.015155e-01	ci left: 1.144847e-03	ci right 1.930381e-03	k: 60	n:40000
C9orf150   40000 perm   10 sec   (3890 perm/sec)   p_kst 1.500000e-03   p_cons 9.815750e-01   p_joint 9.600000e-03

Joint ci ratio: 1.809366e-01	ci left: 8.458135e-03	ci right 1.015957e-02	k: 464	n:50000
Cons ci ratio: 2.415950e-03	ci left: 9.801568e-01	ci right 9.825469e-01	k: 49069	n:50000
KS ci ratio: 4.493085e-01	ci left: 1.180022e-03	ci right 1.879905e-03	k: 75	n:50000
C9orf150   50000 perm   12 sec   (4040 perm/sec)   p_kst 1.500000e-03   p_cons 9.813800e-01   p_joint 9.280000e-03

Joint ci ratio: 1.791471e-01	ci left: 7.207175e-03	ci right 8.641037e-03	k: 474	n:60000
Cons ci ratio: 2.204062e-03	ci left: 9.802870e-01	ci right 9.824661e-01	k: 58884	n:60000
KS ci ratio: 4.199598e-01	ci left: 1.146637e-03	ci right 1.769857e-03	k: 86	n:60000
C9orf150   60000 perm   15 sec   (4125 perm/sec)   p_kst 1.433333e-03   p_cons 9.814000e-01   p_joint 7.900000e-03

Joint ci ratio: 1.652829e-01	ci left: 7.312283e-03	ci right 8.643274e-03	k: 557	n:70000
Cons ci ratio: 2.015571e-03	ci left: 9.808264e-01	ci right 9.828191e-01	k: 68729	n:70000
KS ci ratio: 3.859621e-01	ci left: 1.188277e-03	ci right 1.768596e-03	k: 102	n:70000
C9orf150   70000 perm   17 sec   (4159 perm/sec)   p_kst 1.457143e-03   p_cons 9.818429e-01   p_joint 7.957143e-03

Joint ci ratio: 1.670321e-01	ci left: 6.266177e-03	ci right 7.420022e-03	k: 546	n:80000
Cons ci ratio: 1.886912e-03	ci left: 9.808626e-01	ci right 9.827272e-01	k: 78545	n:80000
KS ci ratio: 3.701435e-01	ci left: 1.141550e-03	ci right 1.670671e-03	k: 111	n:80000
C9orf150   80000 perm   19 sec   (4172 perm/sec)   p_kst 1.387500e-03   p_cons 9.818125e-01   p_joint 6.825000e-03

Joint ci ratio: 1.599010e-01	ci left: 6.102728e-03	ci right 7.173888e-03	k: 596	n:90000
Cons ci ratio: 1.776790e-03	ci left: 9.809623e-01	ci right 9.827176e-01	k: 88367	n:90000
KS ci ratio: 3.517819e-01	ci left: 1.135958e-03	ci right 1.630412e-03	k: 123	n:90000
C9orf150   90000 perm   22 sec   (4163 perm/sec)   p_kst 1.366667e-03   p_cons 9.818556e-01   p_joint 6.622222e-03

Joint ci ratio: 1.588871e-01	ci left: 5.569140e-03	ci right 6.539845e-03	k: 604	n:100000
Cons ci ratio: 1.684880e-03	ci left: 9.810239e-01	ci right 9.826879e-01	k: 98187	n:100000
KS ci ratio: 3.310668e-01	ci left: 1.168660e-03	ci right 1.641021e-03	k: 139	n:100000
C9orf150   100000 perm   24 sec   (4143 perm/sec)   p_kst 1.390000e-03   p_cons 9.818700e-01   p_joint 6.040000e-03

Joint ci ratio: 1.417946e-01	ci left: 6.410536e-03	ci right 7.397550e-03	k: 758	n:110000
Cons ci ratio: 1.605900e-03	ci left: 9.810762e-01	ci right 9.826618e-01	k: 108007	n:110000
KS ci ratio: 3.166913e-01	ci left: 1.170996e-03	ci right 1.619591e-03	k: 152	n:110000
C9orf150   110000 perm   27 sec   (4113 perm/sec)   p_kst 1.381818e-03   p_cons 9.818818e-01   p_joint 6.890909e-03

Joint ci ratio: 1.362561e-01	ci left: 6.383061e-03	ci right 7.324342e-03	k: 821	n:120000
Cons ci ratio: 1.535636e-03	ci left: 9.811553e-01	ci right 9.826713e-01	k: 117831	n:120000
KS ci ratio: 3.040392e-01	ci left: 1.173313e-03	ci right 1.601367e-03	k: 165	n:120000
C9orf150   120000 perm   29 sec   (4077 perm/sec)   p_kst 1.375000e-03   p_cons 9.819250e-01   p_joint 6.841667e-03

Joint ci ratio: 1.217170e-01	ci left: 7.433369e-03	ci right 8.404158e-03	k: 1028	n:130000
Cons ci ratio: 1.478320e-03	ci left: 9.811136e-01	ci right 9.825725e-01	k: 127641	n:130000
KS ci ratio: 2.936141e-01	ci left: 1.168447e-03	ci right 1.577392e-03	k: 177	n:130000
C9orf150   130000 perm   32 sec   (4036 perm/sec)   p_kst 1.361538e-03   p_cons 9.818538e-01   p_joint 7.907692e-03

Joint ci ratio: 1.170848e-01	ci left: 7.477577e-03	ci right 8.414403e-03	k: 1111	n:140000
Cons ci ratio: 1.427815e-03	ci left: 9.810570e-01	ci right 9.824658e-01	k: 137448	n:140000
KS ci ratio: 2.812435e-01	ci left: 1.191039e-03	ci right 1.587217e-03	k: 193	n:140000
C9orf150   140000 perm   35 sec   (3977 perm/sec)   p_kst 1.378571e-03   p_cons 9.817714e-01   p_joint 7.935714e-03

Joint ci ratio: 1.134235e-01	ci left: 7.451704e-03	ci right 8.354140e-03	k: 1184	n:150000
Cons ci ratio: 1.384439e-03	ci left: 9.809479e-01	ci right 9.823134e-01	k: 147246	n:150000
KS ci ratio: 2.763092e-01	ci left: 1.155038e-03	ci right 1.531328e-03	k: 200	n:150000
C9orf150   150000 perm   38 sec   (3928 perm/sec)   p_kst 1.333333e-03   p_cons 9.816400e-01   p_joint 7.893333e-03

Joint ci ratio: 1.159420e-01	ci left: 6.682281e-03	ci right 7.510731e-03	k: 1134	n:160000
Cons ci ratio: 1.249383e-03	ci left: 9.833859e-01	ci right 9.846214e-01	k: 157442	n:160000
KS ci ratio: 2.677856e-01	ci left: 1.158558e-03	ci right 1.522397e-03	k: 213	n:160000
C9orf150   160000 perm   41 sec   (3887 perm/sec)   p_kst 1.331250e-03   p_cons 9.840125e-01   p_joint 7.087500e-03

Joint ci ratio: 1.120106e-01	ci left: 6.752108e-03	ci right 7.558955e-03	k: 1215	n:170000
Cons ci ratio: 1.211868e-03	ci left: 9.834102e-01	ci right 9.846085e-01	k: 167283	n:170000
KS ci ratio: 2.555351e-01	ci left: 1.205843e-03	ci right 1.564449e-03	k: 234	n:170000
C9orf150   170000 perm   44 sec   (3843 perm/sec)   p_kst 1.376471e-03   p_cons 9.840176e-01   p_joint 7.147059e-03

Joint ci ratio: 1.090481e-01	ci left: 6.738920e-03	ci right 7.521524e-03	k: 1282	n:180000
Cons ci ratio: 1.179204e-03	ci left: 9.833871e-01	ci right 9.845528e-01	k: 177116	n:180000
KS ci ratio: 2.492517e-01	ci left: 1.201302e-03	ci right 1.548410e-03	k: 246	n:180000
C9orf150   180000 perm   47 sec   (3799 perm/sec)   p_kst 1.366667e-03   p_cons 9.839778e-01   p_joint 7.122222e-03

Joint ci ratio: 1.058753e-01	ci left: 6.783741e-03	ci right 7.547201e-03	k: 1360	n:190000
Cons ci ratio: 1.148658e-03	ci left: 9.833775e-01	ci right 9.845129e-01	k: 186951	n:190000
KS ci ratio: 2.434102e-01	ci left: 1.197335e-03	ci right 1.533964e-03	k: 258	n:190000
C9orf150   190000 perm   51 sec   (3754 perm/sec)   p_kst 1.357895e-03   p_cons 9.839526e-01   p_joint 7.157895e-03

Joint ci ratio: 1.737004e-01	ci left: 2.319359e-03	ci right 2.765255e-03	k: 507	n:200000
Cons ci ratio: 1.121075e-03	ci left: 9.833490e-01	ci right 9.844569e-01	k: 196782	n:200000
KS ci ratio: 2.362217e-01	ci left: 1.212663e-03	ci right 1.542062e-03	k: 274	n:200000
C9orf150   200000 perm   54 sec   (3705 perm/sec)   p_kst 1.370000e-03   p_cons 9.839100e-01   p_joint 2.535000e-03

Joint ci ratio: 2.064245e-01	ci left: 1.537367e-03	ci right 1.895660e-03	k: 359	n:210000
Cons ci ratio: 1.090606e-03	ci left: 9.834639e-01	ci right 9.845417e-01	k: 206642	n:210000
KS ci ratio: 2.308292e-01	ci left: 1.213201e-03	ci right 1.534150e-03	k: 287	n:210000
C9orf150   210000 perm   58 sec   (3652 perm/sec)   p_kst 1.366667e-03   p_cons 9.840095e-01   p_joint 1.709524e-03

Joint ci ratio: 1.045074e-01	ci left: 6.022319e-03	ci right 6.690787e-03	k: 1397	n:220000
Cons ci ratio: 1.064616e-03	ci left: 9.835039e-01	ci right 9.845560e-01	k: 216488	n:220000
KS ci ratio: 2.239351e-01	ci left: 1.235215e-03	ci right 1.550884e-03	k: 305	n:220000
C9orf150   220000 perm   61 sec   (3604 perm/sec)   p_kst 1.386364e-03   p_cons 9.840364e-01   p_joint 6.350000e-03

Joint ci ratio: 9.680894e-02	ci left: 6.735453e-03	ci right 7.424883e-03	k: 1627	n:230000
Cons ci ratio: 1.042701e-03	ci left: 9.834701e-01	ci right 9.845003e-01	k: 226318	n:230000
KS ci ratio: 2.176239e-01	ci left: 1.255446e-03	ci right 1.566033e-03	k: 323	n:230000
C9orf150   230000 perm   65 sec   (3556 perm/sec)   p_kst 1.404348e-03   p_cons 9.839913e-01   p_joint 7.073913e-03

Joint ci ratio: 9.352511e-02	ci left: 6.926672e-03	ci right 7.610309e-03	k: 1743	n:240000
Cons ci ratio: 1.020730e-03	ci left: 9.834816e-01	ci right 9.844900e-01	k: 236158	n:240000
KS ci ratio: 2.096797e-01	ci left: 1.301734e-03	ci right 1.610508e-03	k: 348	n:240000
C9orf150   240000 perm   68 sec   (3506 perm/sec)   p_kst 1.450000e-03   p_cons 9.839917e-01   p_joint 7.262500e-03

Joint ci ratio: 9.080013e-02	ci left: 7.063856e-03	ci right 7.739640e-03	k: 1849	n:250000
Cons ci ratio: 9.995832e-04	ci left: 9.835086e-01	ci right 9.844961e-01	k: 246002	n:250000
KS ci ratio: 2.033648e-01	ci left: 1.333116e-03	ci right 1.638628e-03	k: 370	n:250000
C9orf150   250000 perm   72 sec   (3455 perm/sec)   p_kst 1.480000e-03   p_cons 9.840080e-01   p_joint 7.396000e-03

Joint ci ratio: 8.889732e-02	ci left: 7.092952e-03	ci right 7.756561e-03	k: 1929	n:260000
Cons ci ratio: 9.794584e-04	ci left: 9.835416e-01	ci right 9.845091e-01	k: 255848	n:260000
KS ci ratio: 1.986028e-01	ci left: 1.347591e-03	ci right 1.648313e-03	k: 388	n:260000
C9orf150   260000 perm   76 sec   (3412 perm/sec)   p_kst 1.492308e-03   p_cons 9.840308e-01   p_joint 7.419231e-03

Joint ci ratio: 8.750495e-02	ci left: 7.054809e-03	ci right 7.703981e-03	k: 1991	n:270000
Cons ci ratio: 9.605003e-04	ci left: 9.835722e-01	ci right 9.845210e-01	k: 265694	n:270000
KS ci ratio: 1.963466e-01	ci left: 1.329364e-03	ci right 1.622245e-03	k: 397	n:270000
C9orf150   270000 perm   80 sec   (3358 perm/sec)   p_kst 1.470370e-03   p_cons 9.840519e-01   p_joint 7.374074e-03

Joint ci ratio: 9.301218e-02	ci left: 6.010266e-03	ci right 6.600022e-03	k: 1764	n:280000
Cons ci ratio: 9.433519e-04	ci left: 9.835755e-01	ci right 9.845073e-01	k: 275533	n:280000
KS ci ratio: 1.936896e-01	ci left: 1.319254e-03	ci right 1.605510e-03	k: 408	n:280000
C9orf150   280000 perm   85 sec   (3313 perm/sec)   p_kst 1.457143e-03   p_cons 9.840464e-01   p_joint 6.300000e-03

Joint ci ratio: 9.144571e-02	ci left: 6.008509e-03	ci right 6.587631e-03	k: 1825	n:290000
Cons ci ratio: 9.246448e-04	ci left: 9.836626e-01	ci right 9.845759e-01	k: 285396	n:290000
KS ci ratio: 1.911375e-01	ci left: 1.309865e-03	ci right 1.589905e-03	k: 419	n:290000
C9orf150   290000 perm   89 sec   (3271 perm/sec)   p_kst 1.444828e-03   p_cons 9.841241e-01   p_joint 6.293103e-03

Joint ci ratio: 9.014832e-02	ci left: 5.980876e-03	ci right 6.548725e-03	k: 1878	n:300000
Cons ci ratio: 9.089298e-04	ci left: 9.836764e-01	ci right 9.845742e-01	k: 295239	n:300000
KS ci ratio: 1.891237e-01	ci left: 1.294774e-03	ci right 1.568336e-03	k: 428	n:300000
C9orf150   300000 perm   93 sec   (3231 perm/sec)   p_kst 1.426667e-03   p_cons 9.841300e-01   p_joint 6.260000e-03

Joint ci ratio: 8.890461e-02	ci left: 5.955081e-03	ci right 6.512275e-03	k: 1931	n:310000
Cons ci ratio: 8.931583e-04	ci left: 9.837189e-01	ci right 9.846011e-01	k: 305091	n:310000
KS ci ratio: 1.865335e-01	ci left: 1.289896e-03	ci right 1.558272e-03	k: 440	n:310000
C9orf150   310000 perm   97 sec   (3189 perm/sec)   p_kst 1.419355e-03   p_cons 9.841645e-01   p_joint 6.229032e-03

Joint ci ratio: 8.722591e-02	ci left: 5.998204e-03	ci right 6.548295e-03	k: 2006	n:320000
Cons ci ratio: 8.792343e-04	ci left: 9.837208e-01	ci right 9.845892e-01	k: 314931	n:320000
KS ci ratio: 1.840470e-01	ci left: 1.285348e-03	ci right 1.548814e-03	k: 452	n:320000
C9orf150   320000 perm   102 sec   (3148 perm/sec)   p_kst 1.412500e-03   p_cons 9.841594e-01   p_joint 6.268750e-03

Joint ci ratio: 8.595097e-02	ci left: 5.994320e-03	ci right 6.535617e-03	k: 2066	n:330000
Cons ci ratio: 8.647633e-04	ci left: 9.837657e-01	ci right 9.846197e-01	k: 324785	n:330000
KS ci ratio: 1.803033e-01	ci left: 1.301349e-03	ci right 1.562078e-03	k: 471	n:330000
C9orf150   330000 perm   106 sec   (3108 perm/sec)   p_kst 1.427273e-03   p_cons 9.841970e-01   p_joint 6.260606e-03

Joint ci ratio: 8.495168e-02	ci left: 5.959050e-03	ci right 6.490595e-03	k: 2115	n:340000
Cons ci ratio: 8.526712e-04	ci left: 9.837454e-01	ci right 9.845875e-01	k: 334618	n:340000
KS ci ratio: 1.780547e-01	ci left: 1.296785e-03	ci right 1.553010e-03	k: 483	n:340000
C9orf150   340000 perm   111 sec   (3069 perm/sec)   p_kst 1.420588e-03   p_cons 9.841706e-01   p_joint 6.220588e-03

Joint ci ratio: 8.357952e-02	ci left: 5.984580e-03	ci right 6.509360e-03	k: 2185	n:350000
Cons ci ratio: 8.422245e-04	ci left: 9.836830e-01	ci right 9.845146e-01	k: 344436	n:350000
KS ci ratio: 1.758882e-01	ci left: 1.292501e-03	ci right 1.544442e-03	k: 495	n:350000
C9orf150   350000 perm   115 sec   (3031 perm/sec)   p_kst 1.414286e-03   p_cons 9.841029e-01   p_joint 6.242857e-03

Joint ci ratio: 8.251134e-02	ci left: 5.973385e-03	ci right 6.490167e-03	k: 2242	n:360000
Cons ci ratio: 8.319177e-04	ci left: 9.836326e-01	ci right 9.844540e-01	k: 354257	n:360000
KS ci ratio: 1.737989e-01	ci left: 1.288472e-03	ci right 1.536331e-03	k: 507	n:360000
C9orf150   360000 perm   120 sec   (2992 perm/sec)   p_kst 1.408333e-03   p_cons 9.840472e-01   p_joint 6.227778e-03

Joint ci ratio: 8.144747e-02	ci left: 5.968132e-03	ci right 6.477485e-03	k: 2301	n:370000
Cons ci ratio: 8.203476e-04	ci left: 9.836480e-01	ci right 9.844579e-01	k: 364101	n:370000
KS ci ratio: 1.712882e-01	ci left: 1.292439e-03	ci right 1.537098e-03	k: 522	n:370000
C9orf150   370000 perm   125 sec   (2955 perm/sec)   p_kst 1.410811e-03   p_cons 9.840568e-01   p_joint 6.218919e-03

Joint ci ratio: 8.038946e-02	ci left: 5.968354e-03	ci right 6.470799e-03	k: 2362	n:380000
Cons ci ratio: 8.088394e-04	ci left: 9.836786e-01	ci right 9.844771e-01	k: 373951	n:380000
KS ci ratio: 1.685698e-01	ci left: 1.301262e-03	ci right 1.543285e-03	k: 539	n:380000
C9orf150   380000 perm   130 sec   (2921 perm/sec)   p_kst 1.418421e-03   p_cons 9.840816e-01   p_joint 6.215789e-03

Joint ci ratio: 7.932226e-02	ci left: 5.976146e-03	ci right 6.472259e-03	k: 2426	n:390000
Cons ci ratio: 7.976044e-04	ci left: 9.837155e-01	ci right 9.845029e-01	k: 383804	n:390000
KS ci ratio: 1.665769e-01	ci left: 1.299832e-03	ci right 1.538444e-03	k: 552	n:390000
C9orf150   390000 perm   135 sec   (2884 perm/sec)   p_kst 1.415385e-03   p_cons 9.841128e-01   p_joint 6.220513e-03

Joint ci ratio: 7.941081e-02	ci left: 5.814471e-03	ci right 6.297727e-03	k: 2421	n:400000
Cons ci ratio: 7.870110e-04	ci left: 9.837430e-01	ci right 9.845200e-01	k: 393654	n:400000
KS ci ratio: 1.642178e-01	ci left: 1.305680e-03	ci right 1.541637e-03	k: 568	n:400000
C9orf150   400000 perm   140 sec   (2851 perm/sec)   p_kst 1.420000e-03   p_cons 9.841350e-01   p_joint 6.052500e-03

Joint ci ratio: 7.743154e-02	ci left: 5.971573e-03	ci right 6.454958e-03	k: 2546	n:410000
Cons ci ratio: 7.791931e-04	ci left: 9.836730e-01	ci right 9.844421e-01	k: 403465	n:410000
KS ci ratio: 1.618177e-01	ci left: 1.313607e-03	ci right 1.547189e-03	k: 585	n:410000
C9orf150   410000 perm   145 sec   (2818 perm/sec)   p_kst 1.426829e-03   p_cons 9.840610e-01   p_joint 6.209756e-03

Joint ci ratio: 7.652074e-02	ci left: 5.971835e-03	ci right 6.449302e-03	k: 2607	n:420000
Cons ci ratio: 7.701875e-04	ci left: 9.836642e-01	ci right 9.844244e-01	k: 413300	n:420000
KS ci ratio: 1.600524e-01	ci left: 1.312036e-03	ci right 1.542549e-03	k: 598	n:420000
C9orf150   420000 perm   151 sec   (2787 perm/sec)   p_kst 1.423810e-03   p_cons 9.840476e-01   p_joint 6.207143e-03

Joint ci ratio: 7.554173e-02	ci left: 5.988089e-03	ci right 6.460462e-03	k: 2675	n:430000
Cons ci ratio: 7.615992e-04	ci left: 9.836511e-01	ci right 9.844028e-01	k: 423133	n:430000
KS ci ratio: 1.584733e-01	ci left: 1.308318e-03	ci right 1.535694e-03	k: 610	n:430000
C9orf150   430000 perm   156 sec   (2756 perm/sec)   p_kst 1.418605e-03   p_cons 9.840302e-01   p_joint 6.220930e-03

Joint ci ratio: 7.465413e-02	ci left: 5.994720e-03	ci right 6.461818e-03	k: 2739	n:440000
Cons ci ratio: 7.523113e-04	ci left: 9.836801e-01	ci right 9.844226e-01	k: 432984	n:440000
KS ci ratio: 1.564380e-01	ci left: 1.313515e-03	ci right 1.538587e-03	k: 626	n:440000
C9orf150   440000 perm   161 sec   (2727 perm/sec)   p_kst 1.422727e-03   p_cons 9.840545e-01   p_joint 6.225000e-03

Joint ci ratio: 7.375740e-02	ci left: 6.007632e-03	ci right 6.469872e-03	k: 2806	n:450000
Cons ci ratio: 7.436168e-04	ci left: 9.836966e-01	ci right 9.844305e-01	k: 442830	n:450000
KS ci ratio: 1.550841e-01	ci left: 1.307817e-03	ci right 1.529793e-03	k: 637	n:450000
C9orf150   450000 perm   167 sec   (2697 perm/sec)   p_kst 1.415556e-03   p_cons 9.840667e-01   p_joint 6.235556e-03

Joint ci ratio: 7.294333e-02	ci left: 6.011476e-03	ci right 6.468690e-03	k: 2869	n:460000
Cons ci ratio: 7.339918e-04	ci left: 9.837651e-01	ci right 9.844896e-01	k: 452700	n:460000
KS ci ratio: 1.535280e-01	ci left: 1.306556e-03	ci right 1.525888e-03	k: 650	n:460000
C9orf150   460000 perm   172 sec   (2668 perm/sec)   p_kst 1.413043e-03   p_cons 9.841304e-01   p_joint 6.236957e-03

Joint ci ratio: 7.213089e-02	ci left: 6.019362e-03	ci right 6.471863e-03	k: 2934	n:470000
Cons ci ratio: 7.255122e-04	ci left: 9.837964e-01	ci right 9.845125e-01	k: 462554	n:470000
KS ci ratio: 1.516751e-01	ci left: 1.311500e-03	ci right 1.528764e-03	k: 666	n:470000
C9orf150   470000 perm   178 sec   (2639 perm/sec)   p_kst 1.417021e-03   p_cons 9.841574e-01   p_joint 6.242553e-03

Joint ci ratio: 7.139291e-02	ci left: 6.018762e-03	ci right 6.466397e-03	k: 2995	n:480000
Cons ci ratio: 7.178937e-04	ci left: 9.838011e-01	ci right 9.845097e-01	k: 472396	n:480000
KS ci ratio: 1.508866e-01	ci left: 1.298207e-03	ci right 1.512050e-03	k: 673	n:480000
C9orf150   480000 perm   184 sec   (2610 perm/sec)   p_kst 1.402083e-03   p_cons 9.841583e-01   p_joint 6.239583e-03

Joint ci ratio: 7.070041e-02	ci left: 6.014198e-03	ci right 6.456977e-03	k: 3054	n:490000
Cons ci ratio: 7.100916e-04	ci left: 9.838243e-01	ci right 9.845251e-01	k: 482247	n:490000
KS ci ratio: 1.495613e-01	ci left: 1.295282e-03	ci right 1.506602e-03	k: 685	n:490000
C9orf150   490000 perm   190 sec   (2582 perm/sec)   p_kst 1.397959e-03   p_cons 9.841776e-01   p_joint 6.232653e-03

Joint ci ratio: 6.984734e-02	ci left: 6.041281e-03	ci right 6.480470e-03	k: 3129	n:500000
Cons ci ratio: 7.034402e-04	ci left: 9.838061e-01	ci right 9.845003e-01	k: 492078	n:500000
KS ci ratio: 1.480582e-01	ci left: 1.296334e-03	ci right 1.505512e-03	k: 699	n:500000
C9orf150   500000 perm   196 sec   (2556 perm/sec)   p_kst 1.398000e-03   p_cons 9.841560e-01   p_joint 6.258000e-03

Joint ci ratio: 6.906780e-02	ci left: 6.059624e-03	ci right 6.495033e-03	k: 3200	n:510000
Cons ci ratio: 6.968397e-04	ci left: 9.837946e-01	ci right 9.844823e-01	k: 501912	n:510000
KS ci ratio: 1.463943e-01	ci left: 1.301133e-03	ci right 1.508519e-03	k: 715	n:510000
C9orf150   510000 perm   202 sec   (2529 perm/sec)   p_kst 1.401961e-03   p_cons 9.841412e-01   p_joint 6.274510e-03

Joint ci ratio: 6.846133e-02	ci left: 6.050823e-03	ci right 6.481629e-03	k: 3257	n:520000
Cons ci ratio: 6.899960e-04	ci left: 9.838030e-01	ci right 9.844839e-01	k: 511756	n:520000
KS ci ratio: 1.449837e-01	ci left: 1.302053e-03	ci right 1.507413e-03	k: 729	n:520000
C9orf150   520000 perm   208 sec   (2501 perm/sec)   p_kst 1.401923e-03   p_cons 9.841462e-01   p_joint 6.263462e-03

Joint ci ratio: 6.797381e-02	ci left: 6.023820e-03	ci right 6.449529e-03	k: 3304	n:530000
Cons ci ratio: 6.835566e-04	ci left: 9.838016e-01	ci right 9.844761e-01	k: 521595	n:530000
KS ci ratio: 1.441966e-01	ci left: 1.292034e-03	ci right 1.494612e-03	k: 737	n:530000
C9orf150   530000 perm   214 sec   (2473 perm/sec)   p_kst 1.390566e-03   p_cons 9.841415e-01   p_joint 6.233962e-03

Joint ci ratio: 6.731492e-02	ci left: 6.030603e-03	ci right 6.452499e-03	k: 3369	n:540000
Cons ci ratio: 6.764099e-04	ci left: 9.838414e-01	ci right 9.845089e-01	k: 531456	n:540000
KS ci ratio: 1.430386e-01	ci left: 1.289531e-03	ci right 1.489954e-03	k: 749	n:540000
C9orf150   540000 perm   221 sec   (2446 perm/sec)   p_kst 1.387037e-03   p_cons 9.841778e-01   p_joint 6.238889e-03

Joint ci ratio: 6.674329e-02	ci left: 6.024642e-03	ci right 6.442403e-03	k: 3427	n:550000
Cons ci ratio: 6.711615e-04	ci left: 9.838008e-01	ci right 9.844631e-01	k: 541274	n:550000
KS ci ratio: 1.416292e-01	ci left: 1.292386e-03	ci right 1.491107e-03	k: 764	n:550000
C9orf150   550000 perm   227 sec   (2422 perm/sec)   p_kst 1.389091e-03   p_cons 9.841345e-01   p_joint 6.230909e-03

Joint ci ratio: 6.613827e-02	ci left: 6.027690e-03	ci right 6.441729e-03	k: 3490	n:560000
Cons ci ratio: 6.651925e-04	ci left: 9.838014e-01	ci right 9.844578e-01	k: 551114	n:560000
KS ci ratio: 1.399913e-01	ci left: 1.300319e-03	ci right 1.497754e-03	k: 782	n:560000
C9orf150   560000 perm   234 sec   (2398 perm/sec)   p_kst 1.396429e-03   p_cons 9.841321e-01   p_joint 6.232143e-03

Joint ci ratio: 6.554941e-02	ci left: 6.030648e-03	ci right 6.441062e-03	k: 3553	n:570000
Cons ci ratio: 6.593430e-04	ci left: 9.838038e-01	ci right 9.844544e-01	k: 560955	n:570000
KS ci ratio: 1.388435e-01	ci left: 1.299518e-03	ci right 1.495080e-03	k: 795	n:570000
C9orf150   570000 perm   240 sec   (2372 perm/sec)   p_kst 1.394737e-03   p_cons 9.841316e-01   p_joint 6.233333e-03

Joint ci ratio: 6.486782e-02	ci left: 6.053875e-03	ci right 6.461425e-03	k: 3628	n:580000
Cons ci ratio: 6.540418e-04	ci left: 9.837870e-01	ci right 9.844323e-01	k: 570785	n:580000
KS ci ratio: 1.378089e-01	ci left: 1.297086e-03	ci right 1.490708e-03	k: 807	n:580000
C9orf150   580000 perm   247 sec   (2349 perm/sec)   p_kst 1.391379e-03   p_cons 9.841121e-01   p_joint 6.255172e-03

Joint ci ratio: 6.432950e-02	ci left: 6.052987e-03	ci right 6.456969e-03	k: 3689	n:590000
Cons ci ratio: 6.491465e-04	ci left: 9.837570e-01	ci right 9.843975e-01	k: 580607	n:590000
KS ci ratio: 1.367971e-01	ci left: 1.294742e-03	ci right 1.486479e-03	k: 819	n:590000
C9orf150   590000 perm   254 sec   (2327 perm/sec)   p_kst 1.388136e-03   p_cons 9.840797e-01   p_joint 6.252542e-03

Joint ci ratio: 6.387294e-02	ci left: 6.039020e-03	ci right 6.439104e-03	k: 3742	n:600000
Cons ci ratio: 6.437067e-04	ci left: 9.837601e-01	ci right 9.843952e-01	k: 590448	n:600000
KS ci ratio: 1.354814e-01	ci left: 1.298921e-03	ci right 1.489279e-03	k: 835	n:600000
C9orf150   600000 perm   260 sec   (2303 perm/sec)   p_kst 1.391667e-03   p_cons 9.840800e-01   p_joint 6.236667e-03

Joint ci ratio: 6.328353e-02	ci left: 6.052951e-03	ci right 6.450121e-03	k: 3812	n:610000
Cons ci ratio: 6.383680e-04	ci left: 9.837648e-01	ci right 9.843946e-01	k: 600290	n:610000
KS ci ratio: 1.341243e-01	ci left: 1.304557e-03	ci right 1.493672e-03	k: 852	n:610000
C9orf150   610000 perm   267 sec   (2281 perm/sec)   p_kst 1.396721e-03   p_cons 9.840820e-01   p_joint 6.249180e-03

Joint ci ratio: 6.346282e-02	ci left: 5.921976e-03	ci right 6.311693e-03	k: 3791	n:620000
Cons ci ratio: 6.338768e-04	ci left: 9.837334e-01	ci right 9.843588e-01	k: 610110	n:620000
KS ci ratio: 1.327307e-01	ci left: 1.311579e-03	ci right 1.499581e-03	k: 870	n:620000
C9orf150   620000 perm   274 sec   (2260 perm/sec)   p_kst 1.403226e-03   p_cons 9.840484e-01   p_joint 6.114516e-03

Joint ci ratio: 6.208887e-02	ci left: 6.092036e-03	ci right 6.483954e-03	k: 3960	n:630000
Cons ci ratio: 6.285228e-04	ci left: 9.837512e-01	ci right 9.843713e-01	k: 619960	n:630000
KS ci ratio: 1.317512e-01	ci left: 1.310712e-03	ci right 1.497095e-03	k: 883	n:630000
C9orf150   630000 perm   281 sec   (2238 perm/sec)   p_kst 1.401587e-03   p_cons 9.840635e-01   p_joint 6.285714e-03

Joint ci ratio: 6.240981e-02	ci left: 5.935306e-03	ci right 6.319185e-03	k: 3920	n:640000
Cons ci ratio: 6.238298e-04	ci left: 9.837417e-01	ci right 9.843571e-01	k: 629793	n:640000
KS ci ratio: 1.308662e-01	ci left: 1.308366e-03	ci right 1.493069e-03	k: 895	n:640000
C9orf150   640000 perm   289 sec   (2218 perm/sec)   p_kst 1.398437e-03   p_cons 9.840516e-01   p_joint 6.125000e-03

Joint ci ratio: 6.184406e-02	ci left: 5.953043e-03	ci right 6.334455e-03	k: 3992	n:650000
Cons ci ratio: 6.189064e-04	ci left: 9.837495e-01	ci right 9.843600e-01	k: 639637	n:650000
KS ci ratio: 1.296418e-01	ci left: 1.313540e-03	ci right 1.497104e-03	k: 912	n:650000
C9orf150   650000 perm   296 sec   (2198 perm/sec)   p_kst 1.403077e-03   p_cons 9.840569e-01   p_joint 6.141538e-03

Joint ci ratio: 6.136181e-02	ci left: 5.956830e-03	ci right 6.335403e-03	k: 4055	n:660000
Cons ci ratio: 6.145424e-04	ci left: 9.837342e-01	ci right 9.843404e-01	k: 649466	n:660000
KS ci ratio: 1.284512e-01	ci left: 1.318564e-03	ci right 1.501009e-03	k: 929	n:660000
C9orf150   660000 perm   303 sec   (2178 perm/sec)   p_kst 1.407576e-03   p_cons 9.840394e-01   p_joint 6.143939e-03

Joint ci ratio: 6.011004e-02	ci left: 6.117816e-03	ci right 6.498412e-03	k: 4225	n:670000
Cons ci ratio: 6.101818e-04	ci left: 9.837238e-01	ci right 9.843257e-01	k: 659298	n:670000
KS ci ratio: 1.272255e-01	ci left: 1.324891e-03	ci right 1.506330e-03	k: 947	n:670000
C9orf150   670000 perm   311 sec   (2156 perm/sec)   p_kst 1.413433e-03   p_cons 9.840269e-01   p_joint 6.305970e-03

Joint ci ratio: 5.963197e-02	ci left: 6.126351e-03	ci right 6.504343e-03	k: 4293	n:680000
Cons ci ratio: 6.054307e-04	ci left: 9.837390e-01	ci right 9.843362e-01	k: 669147	n:680000
KS ci ratio: 1.260996e-01	ci left: 1.329615e-03	ci right 1.509970e-03	k: 964	n:680000
C9orf150   680000 perm   318 sec   (2138 perm/sec)   p_kst 1.417647e-03   p_cons 9.840397e-01   p_joint 6.313235e-03

Joint ci ratio: 5.922665e-02	ci left: 6.121800e-03	ci right 6.496856e-03	k: 4352	n:690000
Cons ci ratio: 6.013708e-04	ci left: 9.837231e-01	ci right 9.843163e-01	k: 678975	n:690000
KS ci ratio: 1.251947e-01	ci left: 1.329997e-03	ci right 1.509013e-03	k: 978	n:690000
C9orf150   690000 perm   326 sec   (2118 perm/sec)   p_kst 1.417391e-03   p_cons 9.840217e-01   p_joint 6.307246e-03

Joint ci ratio: 5.880937e-02	ci left: 6.121610e-03	ci right 6.493922e-03	k: 4414	n:700000
Cons ci ratio: 5.974721e-04	ci left: 9.837033e-01	ci right 9.842926e-01	k: 688800	n:700000
KS ci ratio: 1.243718e-01	ci left: 1.328989e-03	ci right 1.506607e-03	k: 991	n:700000
C9orf150   700000 perm   333 sec   (2099 perm/sec)   p_kst 1.415714e-03   p_cons 9.840000e-01   p_joint 6.305714e-03

Joint ci ratio: 5.845994e-02	ci left: 6.108942e-03	ci right 6.478202e-03	k: 4467	n:710000
Cons ci ratio: 5.934350e-04	ci left: 9.836955e-01	ci right 9.842808e-01	k: 698633	n:710000
KS ci ratio: 1.239981e-01	ci left: 1.318459e-03	ci right 1.494101e-03	k: 997	n:710000
C9orf150   710000 perm   341 sec   (2080 perm/sec)   p_kst 1.404225e-03   p_cons 9.839901e-01   p_joint 6.291549e-03

Joint ci ratio: 5.803277e-02	ci left: 6.114428e-03	ci right 6.481228e-03	k: 4533	n:720000
Cons ci ratio: 5.894265e-04	ci left: 9.836907e-01	ci right 9.842721e-01	k: 708468	n:720000
KS ci ratio: 1.228339e-01	ci left: 1.325721e-03	ci right 1.500552e-03	k: 1016	n:720000
C9orf150   720000 perm   349 sec   (2062 perm/sec)   p_kst 1.411111e-03   p_cons 9.839833e-01   p_joint 6.295833e-03

Joint ci ratio: 5.763373e-02	ci left: 6.115722e-03	ci right 6.479993e-03	k: 4596	n:730000
Cons ci ratio: 5.858285e-04	ci left: 9.836681e-01	ci right 9.842459e-01	k: 718290	n:730000
KS ci ratio: 1.223542e-01	ci left: 1.318183e-03	ci right 1.491292e-03	k: 1024	n:730000
C9orf150   730000 perm   357 sec   (2045 perm/sec)   p_kst 1.402740e-03   p_cons 9.839589e-01   p_joint 6.295890e-03

Joint ci ratio: 5.729233e-02	ci left: 6.106333e-03	ci right 6.467819e-03	k: 4651	n:740000
Cons ci ratio: 5.821699e-04	ci left: 9.836529e-01	ci right 9.842271e-01	k: 728117	n:740000
KS ci ratio: 1.215856e-01	ci left: 1.317401e-03	ci right 1.489242e-03	k: 1037	n:740000
C9orf150   740000 perm   365 sec   (2027 perm/sec)   p_kst 1.401351e-03   p_cons 9.839419e-01   p_joint 6.285135e-03

Joint ci ratio: 5.686582e-02	ci left: 6.116917e-03	ci right 6.476245e-03	k: 4721	n:750000
Cons ci ratio: 5.784808e-04	ci left: 9.836435e-01	ci right 9.842140e-01	k: 737948	n:750000
KS ci ratio: 1.206591e-01	ci left: 1.320523e-03	ci right 1.491365e-03	k: 1053	n:750000
C9orf150   750000 perm   373 sec   (2009 perm/sec)   p_kst 1.404000e-03   p_cons 9.839307e-01   p_joint 6.294667e-03

Joint ci ratio: 5.712439e-02	ci left: 5.981944e-03	ci right 6.334994e-03	k: 4679	n:760000
Cons ci ratio: 5.745499e-04	ci left: 9.836517e-01	ci right 9.842183e-01	k: 747792	n:760000
KS ci ratio: 1.196974e-01	ci left: 1.324844e-03	ci right 1.494782e-03	k: 1070	n:760000
C9orf150   760000 perm   382 sec   (1992 perm/sec)   p_kst 1.407895e-03   p_cons 9.839368e-01   p_joint 6.156579e-03

Joint ci ratio: 5.669559e-02	ci left: 5.995153e-03	ci right 6.346240e-03	k: 4750	n:770000
Cons ci ratio: 5.710966e-04	ci left: 9.836374e-01	ci right 9.842005e-01	k: 757619	n:770000
KS ci ratio: 1.186492e-01	ci left: 1.331578e-03	ci right 1.500780e-03	k: 1089	n:770000
C9orf150   770000 perm   390 sec   (1975 perm/sec)   p_kst 1.414286e-03   p_cons 9.839208e-01   p_joint 6.168831e-03

Joint ci ratio: 5.639411e-02	ci left: 5.982752e-03	ci right 6.331188e-03	k: 4801	n:780000
Cons ci ratio: 5.680258e-04	ci left: 9.836053e-01	ci right 9.841654e-01	k: 767432	n:780000
KS ci ratio: 1.181090e-01	ci left: 1.326947e-03	ci right 1.494739e-03	k: 1099	n:780000
C9orf150   780000 perm   398 sec   (1958 perm/sec)   p_kst 1.408974e-03   p_cons 9.838872e-01   p_joint 6.155128e-03

Joint ci ratio: 5.613231e-02	ci left: 5.963180e-03	ci right 6.308811e-03	k: 4846	n:790000
Cons ci ratio: 5.643260e-04	ci left: 9.836124e-01	ci right 9.841689e-01	k: 777275	n:790000
KS ci ratio: 1.176292e-01	ci left: 1.321207e-03	ci right 1.487547e-03	k: 1108	n:790000
C9orf150   790000 perm   407 sec   (1943 perm/sec)   p_kst 1.402532e-03   p_cons 9.838924e-01   p_joint 6.134177e-03

Joint ci ratio: 5.584541e-02	ci left: 5.950264e-03	ci right 6.293327e-03	k: 4896	n:800000
Cons ci ratio: 5.613606e-04	ci left: 9.835815e-01	ci right 9.841350e-01	k: 787088	n:800000
KS ci ratio: 1.167376e-01	ci left: 1.325319e-03	ci right 1.490825e-03	k: 1125	n:800000
C9orf150   800000 perm   415 sec   (1927 perm/sec)   p_kst 1.406250e-03   p_cons 9.838600e-01   p_joint 6.120000e-03

Joint ci ratio: 5.555156e-02	ci left: 5.940106e-03	ci right 6.280724e-03	k: 4948	n:810000
Cons ci ratio: 5.577890e-04	ci left: 9.835887e-01	ci right 9.841387e-01	k: 796931	n:810000
KS ci ratio: 1.161718e-01	ci left: 1.322142e-03	ci right 1.486395e-03	k: 1136	n:810000
C9orf150   810000 perm   424 sec   (1911 perm/sec)   p_kst 1.402469e-03   p_cons 9.838654e-01   p_joint 6.108642e-03

Joint ci ratio: 5.522343e-02	ci left: 5.938621e-03	ci right 6.277078e-03	k: 5007	n:820000
Cons ci ratio: 5.543485e-04	ci left: 9.835921e-01	ci right 9.841387e-01	k: 806771	n:820000
KS ci ratio: 1.154129e-01	ci left: 1.323781e-03	ci right 1.487091e-03	k: 1151	n:820000
C9orf150   820000 perm   433 sec   (1896 perm/sec)   p_kst 1.403659e-03   p_cons 9.838671e-01   p_joint 6.106098e-03

Joint ci ratio: 5.494471e-02	ci left: 5.927669e-03	ci right 6.263743e-03	k: 5058	n:830000
Cons ci ratio: 5.510127e-04	ci left: 9.835929e-01	ci right 9.841362e-01	k: 816609	n:830000
KS ci ratio: 1.148166e-01	ci left: 1.321873e-03	ci right 1.484048e-03	k: 1163	n:830000
C9orf150   830000 perm   441 sec   (1881 perm/sec)   p_kst 1.401205e-03   p_cons 9.838663e-01   p_joint 6.093976e-03

Joint ci ratio: 5.458961e-02	ci left: 5.934598e-03	ci right 6.268822e-03	k: 5124	n:840000
Cons ci ratio: 5.475926e-04	ci left: 9.836022e-01	ci right 9.841421e-01	k: 826454	n:840000
KS ci ratio: 1.138423e-01	ci left: 1.329266e-03	ci right 1.490871e-03	k: 1183	n:840000
C9orf150   840000 perm   450 sec   (1866 perm/sec)   p_kst 1.408333e-03   p_cons 9.838738e-01   p_joint 6.100000e-03

Joint ci ratio: 5.423079e-02	ci left: 5.943692e-03	ci right 6.276158e-03	k: 5192	n:850000
Cons ci ratio: 5.443968e-04	ci left: 9.836017e-01	ci right 9.841385e-01	k: 836291	n:850000
KS ci ratio: 1.129394e-01	ci left: 1.335346e-03	ci right 1.496317e-03	k: 1202	n:850000
C9orf150   850000 perm   459 sec   (1851 perm/sec)   p_kst 1.414118e-03   p_cons 9.838718e-01   p_joint 6.108235e-03

Joint ci ratio: 5.391506e-02	ci left: 5.944550e-03	ci right 6.275069e-03	k: 5253	n:860000
Cons ci ratio: 5.407406e-04	ci left: 9.836318e-01	ci right 9.841650e-01	k: 846154	n:860000
KS ci ratio: 1.121956e-01	ci left: 1.337900e-03	ci right 1.498046e-03	k: 1218	n:860000
C9orf150   860000 perm   468 sec   (1837 perm/sec)   p_kst 1.416279e-03   p_cons 9.839000e-01   p_joint 6.108140e-03

Joint ci ratio: 5.356424e-02	ci left: 5.954467e-03	ci right 6.283317e-03	k: 5322	n:870000
Cons ci ratio: 5.376237e-04	ci left: 9.836333e-01	ci right 9.841634e-01	k: 855993	n:870000
KS ci ratio: 1.113761e-01	ci left: 1.342633e-03	ci right 1.502095e-03	k: 1236	n:870000
C9orf150   870000 perm   478 sec   (1821 perm/sec)   p_kst 1.420690e-03   p_cons 9.839000e-01   p_joint 6.117241e-03

Joint ci ratio: 5.324004e-02	ci left: 5.959681e-03	ci right 6.286765e-03	k: 5387	n:880000
Cons ci ratio: 5.345601e-04	ci left: 9.836349e-01	ci right 9.841619e-01	k: 865832	n:880000
KS ci ratio: 1.103982e-01	ci left: 1.351683e-03	ci right 1.510719e-03	k: 1258	n:880000
C9orf150   880000 perm   487 sec   (1807 perm/sec)   p_kst 1.429545e-03   p_cons 9.839000e-01   p_joint 6.121591e-03

Joint ci ratio: 5.299015e-02	ci left: 5.949260e-03	ci right 6.274192e-03	k: 5438	n:890000
Cons ci ratio: 5.314351e-04	ci left: 9.836432e-01	ci right 9.841672e-01	k: 875677	n:890000
KS ci ratio: 1.099626e-01	ci left: 1.347422e-03	ci right 1.505290e-03	k: 1268	n:890000
C9orf150   890000 perm   496 sec   (1793 perm/sec)   p_kst 1.424719e-03   p_cons 9.839067e-01   p_joint 6.110112e-03

Joint ci ratio: 5.271960e-02	ci left: 5.944556e-03	ci right 6.267524e-03	k: 5494	n:900000
Cons ci ratio: 5.282159e-04	ci left: 9.836603e-01	ci right 9.841811e-01	k: 885530	n:900000
KS ci ratio: 1.092758e-01	ci left: 1.349741e-03	ci right 1.506829e-03	k: 1284	n:900000
C9orf150   900000 perm   506 sec   (1779 perm/sec)   p_kst 1.426667e-03   p_cons 9.839222e-01   p_joint 6.104444e-03

Joint ci ratio: 5.243889e-02	ci left: 5.943214e-03	ci right 6.264338e-03	k: 5553	n:910000
Cons ci ratio: 5.254736e-04	ci left: 9.836515e-01	ci right 9.841696e-01	k: 895360	n:910000
KS ci ratio: 1.086435e-01	ci left: 1.350943e-03	ci right 1.507203e-03	k: 1299	n:910000
C9orf150   910000 perm   515 sec   (1766 perm/sec)   p_kst 1.427473e-03   p_cons 9.839121e-01   p_joint 6.102198e-03

Joint ci ratio: 5.214393e-02	ci left: 5.946197e-03	ci right 6.265620e-03	k: 5616	n:920000
Cons ci ratio: 5.228093e-04	ci left: 9.836407e-01	ci right 9.841562e-01	k: 905188	n:920000
KS ci ratio: 1.081456e-01	ci left: 1.348948e-03	ci right 1.504218e-03	k: 1311	n:920000
C9orf150   920000 perm   525 sec   (1753 perm/sec)   p_kst 1.425000e-03   p_cons 9.839000e-01   p_joint 6.104348e-03

Joint ci ratio: 5.188147e-02	ci left: 5.942752e-03	ci right 6.260336e-03	k: 5673	n:930000
Cons ci ratio: 5.197436e-04	ci left: 9.836573e-01	ci right 9.841698e-01	k: 915041	n:930000
KS ci ratio: 1.074111e-01	ci left: 1.353277e-03	ci right 1.507920e-03	k: 1329	n:930000
C9orf150   930000 perm   535 sec   (1740 perm/sec)   p_kst 1.429032e-03   p_cons 9.839151e-01   p_joint 6.100000e-03

Joint ci ratio: 5.157316e-02	ci left: 5.950937e-03	ci right 6.267012e-03	k: 5741	n:940000
Cons ci ratio: 5.169046e-04	ci left: 9.836628e-01	ci right 9.841725e-01	k: 924884	n:940000
KS ci ratio: 1.066122e-01	ci left: 1.359588e-03	ci right 1.513724e-03	k: 1349	n:940000
C9orf150   940000 perm   544 sec   (1727 perm/sec)   p_kst 1.435106e-03   p_cons 9.839191e-01   p_joint 6.107447e-03

Joint ci ratio: 5.130138e-02	ci left: 5.951680e-03	ci right 6.266079e-03	k: 5802	n:950000
Cons ci ratio: 5.144364e-04	ci left: 9.836481e-01	ci right 9.841553e-01	k: 934708	n:950000
KS ci ratio: 1.060248e-01	ci left: 1.360646e-03	ci right 1.513999e-03	k: 1364	n:950000
C9orf150   950000 perm   554 sec   (1714 perm/sec)   p_kst 1.435789e-03   p_cons 9.839032e-01   p_joint 6.107368e-03

Joint ci ratio: 5.102510e-02	ci left: 5.954469e-03	ci right 6.267272e-03	k: 5865	n:960000
Cons ci ratio: 5.115316e-04	ci left: 9.836630e-01	ci right 9.841674e-01	k: 944560	n:960000
KS ci ratio: 1.055235e-01	ci left: 1.359656e-03	ci right 1.512128e-03	k: 1377	n:960000
C9orf150   960000 perm   564 sec   (1701 perm/sec)   p_kst 1.434375e-03   p_cons 9.839167e-01   p_joint 6.109375e-03

Joint ci ratio: 5.076616e-02	ci left: 5.954152e-03	ci right 6.265304e-03	k: 5925	n:970000
Cons ci ratio: 5.088409e-04	ci left: 9.836673e-01	ci right 9.841690e-01	k: 954402	n:970000
KS ci ratio: 1.050672e-01	ci left: 1.357684e-03	ci right 1.509236e-03	k: 1389	n:970000
C9orf150   970000 perm   575 sec   (1687 perm/sec)   p_kst 1.431959e-03   p_cons 9.839196e-01   p_joint 6.108247e-03

Joint ci ratio: 5.048144e-02	ci left: 5.960897e-03	ci right 6.270604e-03	k: 5992	n:980000
Cons ci ratio: 5.061922e-04	ci left: 9.836715e-01	ci right 9.841705e-01	k: 964244	n:980000
KS ci ratio: 1.046541e-01	ci left: 1.354760e-03	ci right 1.505354e-03	k: 1400	n:980000
C9orf150   980000 perm   585 sec   (1674 perm/sec)   p_kst 1.428571e-03   p_cons 9.839224e-01   p_joint 6.114286e-03

Joint ci ratio: 5.027245e-02	ci left: 5.950554e-03	ci right 6.258407e-03	k: 6042	n:990000
Cons ci ratio: 5.036165e-04	ci left: 9.836736e-01	ci right 9.841701e-01	k: 974084	n:990000
KS ci ratio: 1.042458e-01	ci left: 1.351896e-03	ci right 1.501550e-03	k: 1411	n:990000
C9orf150   990000 perm   596 sec   (1662 perm/sec)   p_kst 1.425253e-03   p_cons 9.839232e-01   p_joint 6.103030e-03

Joint ci ratio: 4.997944e-02	ci left: 5.961160e-03	ci right 6.267711e-03	k: 6113	n:1000000
Cons ci ratio: 5.009690e-04	ci left: 9.836826e-01	ci right 9.841765e-01	k: 983931	n:1000000
KS ci ratio: 1.034427e-01	ci left: 1.359806e-03	ci right 1.509105e-03	k: 1433	n:1000000
C9orf150   1000000 perm   606 sec   (1650 perm/sec)   p_kst 1.433000e-03   p_cons 9.839310e-01   p_joint 6.113000e-03

Joint ci ratio: 4.968746e-02	ci left: 5.972538e-03	ci right 6.277829e-03	k: 6185	n:1010000
Cons ci ratio: 4.983938e-04	ci left: 9.836896e-01	ci right 9.841809e-01	k: 993776	n:1010000
KS ci ratio: 1.029414e-01	ci left: 1.359847e-03	ci right 1.508383e-03	k: 1447	n:1010000
C9orf150   1010000 perm   617 sec   (1638 perm/sec)   p_kst 1.432673e-03   p_cons 9.839366e-01   p_joint 6.123762e-03

Joint ci ratio: 4.470586e-02	ci left: 7.314085e-03	ci right 7.649505e-03	k: 7630	n:1020000
Cons ci ratio: 4.956271e-04	ci left: 9.837112e-01	ci right 9.841998e-01	k: 1003636	n:1020000
KS ci ratio: 1.021330e-01	ci left: 1.368486e-03	ci right 1.516721e-03	k: 1470	n:1020000
C9orf150   1020000 perm   627 sec   (1626 perm/sec)   p_kst 1.441176e-03   p_cons 9.839569e-01   p_joint 7.480392e-03

Joint ci ratio: 4.850926e-02	ci left: 6.147144e-03	ci right 6.453701e-03	k: 6488	n:1030000
Cons ci ratio: 4.932692e-04	ci left: 9.837089e-01	ci right 9.841952e-01	k: 1013472	n:1030000
KS ci ratio: 1.016162e-01	ci left: 1.369392e-03	ci right 1.516930e-03	k: 1485	n:1030000
C9orf150   1030000 perm   638 sec   (1614 perm/sec)   p_kst 1.441748e-03   p_cons 9.839534e-01   p_joint 6.299029e-03

Joint ci ratio: 4.827177e-02	ci left: 6.148830e-03	ci right 6.453929e-03	k: 6552	n:1040000
Cons ci ratio: 4.907055e-04	ci left: 9.837221e-01	ci right 9.842059e-01	k: 1023324	n:1040000
KS ci ratio: 1.011409e-01	ci left: 1.369345e-03	ci right 1.516147e-03	k: 1499	n:1040000
C9orf150   1040000 perm   649 sec   (1603 perm/sec)   p_kst 1.441346e-03   p_cons 9.839654e-01   p_joint 6.300000e-03

Joint ci ratio: 4.801583e-02	ci left: 6.156135e-03	ci right 6.459932e-03	k: 6622	n:1050000
Cons ci ratio: 4.885348e-04	ci left: 9.837121e-01	ci right 9.841938e-01	k: 1033152	n:1050000
KS ci ratio: 1.004730e-01	ci left: 1.374871e-03	ci right 1.521235e-03	k: 1519	n:1050000
C9orf150   1050000 perm   660 sec   (1591 perm/sec)   p_kst 1.446667e-03   p_cons 9.839543e-01   p_joint 6.306667e-03

Joint ci ratio: 4.840864e-02	ci left: 5.999252e-03	ci right 6.297796e-03	k: 6516	n:1060000
Cons ci ratio: 4.861891e-04	ci left: 9.837156e-01	ci right 9.841949e-01	k: 1042994	n:1060000
KS ci ratio: 9.991572e-02	ci left: 1.377536e-03	ci right 1.523323e-03	k: 1536	n:1060000
C9orf150   1060000 perm   671 sec   (1580 perm/sec)   p_kst 1.449057e-03   p_cons 9.839566e-01   p_joint 6.147170e-03

Outputting figure to mutsig2_images.part000000000027/C9orf150.2_695_1060000_0.0014491_0.98396_0.0061472.png
                gene_name: C9orf150
               theta_stop: 0.100 
                    nperm: 1060000 
                     p_ks: 0.0014 
        ci_ks_bounds_left: 0.0014 
       ci_ks_bounds_right: 0.0015 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.0061 
     ci_joint_bounds_left: 0.0060 
    ci_joint_bounds_right: 0.0063 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000027
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 27 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1726>
Subject: Job 8704134: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1726>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000028> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:36:18 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000028.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000028.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 28  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000028.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    261.90 sec.
    Max Memory :      6023 MB
    Max Swap   :      8464 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
28
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 28
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 28: processing genes 2444 - 2533
Calculating significance of each gene.
Using projection method.
2444	C9orf171	1
2445	C9orf172	1
2446	C9orf173	1
2447	C9orf21	1
2448	C9orf23	1
2449	C9orf24	1
2450	C9orf25	1
2451	C9orf3	1
2452	C9orf30	1
2453	C9orf37	1
2454	C9orf4	1
2455	C9orf40	1
2456	C9orf41	1
2457	C9orf43	1
2458	C9orf46	1
2459	C9orf47	1
2460	C9orf5	1
2461	C9orf50	9.141210e-02
2462	C9orf6	1
2463	C9orf64	1
2464	C9orf66	1
2465	C9orf68	1
2466	C9orf69	5.645332e-02
2467	C9orf7	6.035043e-03
2468	C9orf71	1
2469	C9orf72	6.898166e-02
2470	C9orf78	1
2471	C9orf79	1
2472	C9orf80	1
2473	C9orf82	1
2474	C9orf84	1
2475	C9orf85	1
2476	C9orf86	1
2477	C9orf89	1
2478	C9orf9	1
2479	C9orf91	1
2480	C9orf93	1
2481	C9orf95	1.119689e-02
2482	C9orf96	1
2483	C9orf98	1
2484	CA1	1
2485	CA10	1
2486	CA11	1
2487	CA12	1
2488	CA13	6.525377e-03
2489	CA14	1
2490	CA2	1
2491	CA3	1
2492	CA4	1
2493	CA5A	1
2494	CA5B	1
2495	CA6	1
2496	CA7	1
2497	CA8	1
2498	CA9	1
2499	CAB39	1
2500	CAB39L	1
2501	CABC1	1
2502	CABIN1	3.563330e-01
2503	CABLES1	1
2504	CABLES2	1
2505	CABP1	1
2506	CABP2	1
2507	CABP4	1
2508	CABP5	5.267059e-02
2509	CABP7	1
2510	CABYR	1
2511	CACHD1	7.337643e-02
2512	CACNA1A	1.075149e-01
2513	CACNA1B	4.917128e-01
2514	CACNA1C	4.522240e-01
2515	CACNA1D	1
2516	CACNA1E	7.290755e-02
2517	CACNA1F	1
2518	CACNA1G	1.340749e-01
2519	CACNA1H	3.650363e-01
2520	CACNA1I	1
2521	CACNA1S	6.155100e-01
In gene CACNA2D1 the following bins exceed PROBCAP:
    THCA-ET-A25O-TP	categ 6	N = 2662    n = 1	mu =   6.82e-08
2522	CACNA2D1	4.709290e-02
2523	CACNA2D2	1
2524	CACNA2D3	1.900548e-01
2525	CACNA2D4	3.138668e-01
2526	CACNB1	1
2527	CACNB2	1
In gene CACNB3 the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 5	N = 1458    n = 1	mu =   1.70e-07
2528	CACNB3	1.314180e-01
2529	CACNB4	1
2530	CACNG1	1
2531	CACNG2	1
2532	CACNG3	1
2533	CACNG4	1
Done

Running MutSig 2:
Scatter job 28: processing genes 2444 - 2533
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CACNA1E
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.773313e-02	ci left: 6.570614e-01	ci right 6.756416e-01	k: 6664	n:10000
Cons ci ratio: 5.589344e-02	ci left: 3.203876e-01	ci right 3.389118e-01	k: 3296	n:10000
KS ci ratio: 3.501845e-02	ci left: 5.462969e-01	ci right 5.658704e-01	k: 5561	n:10000
CACNA1E   10000 perm   2 sec   (4922 perm/sec)   p_kst 5.561000e-01   p_cons 3.296000e-01   p_joint 6.664000e-01

Outputting figure to mutsig2_images.part000000000028/CACNA1E.3_7001_10000_0.5561_0.3296_0.6664.png
                gene_name: CACNA1E
               theta_stop: 0.056 
                    nperm: 10000 
                     p_ks: 0.56 
        ci_ks_bounds_left: 0.55 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.33 
      ci_cons_bounds_left: 0.32 
     ci_cons_bounds_right: 0.34 
                  p_joint: 0.67 
     ci_joint_bounds_left: 0.66 
    ci_joint_bounds_right: 0.68 

Current progress: 17 percent done.
CA13
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.424278e-02	ci left: 4.299405e-01	ci right 4.494947e-01	k: 4397	n:10000
Cons ci ratio: 5.204093e-02	ci left: 3.524727e-01	ci right 3.714078e-01	k: 3619	n:10000
KS ci ratio: 3.437765e-02	ci left: 5.554160e-01	ci right 5.749460e-01	k: 5652	n:10000
CA13   10000 perm   1 sec   (7471 perm/sec)   p_kst 5.652000e-01   p_cons 3.619000e-01   p_joint 4.397000e-01

Outputting figure to mutsig2_images.part000000000028/CA13.2_817_10000_0.5652_0.3619_0.4397.png
                gene_name: CA13
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.57 
        ci_ks_bounds_left: 0.56 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.44 
     ci_joint_bounds_left: 0.43 
    ci_joint_bounds_right: 0.45 

Current progress: 33 percent done.
CACHD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.641767e-02	ci left: 8.436649e-01	ci right 8.577302e-01	k: 8508	n:10000
KS ci ratio: 1.025412e-01	ci left: 1.209243e-01	ci right 1.340936e-01	k: 1274	n:10000
CACHD1   10000 perm   2 sec   (5696 perm/sec)   p_kst 1.274000e-01   p_cons 8.508000e-01   p_joint 1

Joint ci ratio: 6.243353e-02	ci left: 1.594848e-01	ci right 1.698129e-01	k: 3292	n:20000
Cons ci ratio: 1.150299e-02	ci left: 8.481175e-01	ci right 8.579796e-01	k: 17062	n:20000
KS ci ratio: 7.301841e-02	ci left: 1.213321e-01	ci right 1.305770e-01	k: 2518	n:20000
CACHD1   20000 perm   4 sec   (5295 perm/sec)   p_kst 1.259000e-01   p_cons 8.531000e-01   p_joint 1.646000e-01

Outputting figure to mutsig2_images.part000000000028/CACHD1.2_3780_20000_0.1259_0.8531_0.1646.png
                gene_name: CACHD1
               theta_stop: 0.073 
                    nperm: 20000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.85 
      ci_cons_bounds_left: 0.85 
     ci_cons_bounds_right: 0.86 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.17 

Current progress: 50 percent done.
CACNA1A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.544729e-01	ci left: 1.222067e-03	ci right 3.087156e-03	k: 20	n:10000
Cons ci ratio: 8.347854e-01	ci left: 1.300388e-03	ci right 3.208291e-03	k: 21	n:10000
KS ci ratio: 1.095497e-01	ci left: 1.072486e-01	ci right 1.197776e-01	k: 1134	n:10000
CACNA1A   10000 perm   2 sec   (4654 perm/sec)   p_kst 1.134000e-01   p_cons 2.100000e-03   p_joint 2.000000e-03

Joint ci ratio: 7.538762e-01	ci left: 8.493734e-04	ci right 1.904225e-03	k: 26	n:20000
Cons ci ratio: 6.438316e-01	ci left: 1.261006e-03	ci right 2.491096e-03	k: 36	n:20000
KS ci ratio: 7.769665e-02	ci left: 1.084964e-01	ci right 1.173165e-01	k: 2257	n:20000
CACNA1A   20000 perm   5 sec   (4291 perm/sec)   p_kst 1.128500e-01   p_cons 1.800000e-03   p_joint 1.300000e-03

Joint ci ratio: 4.713617e-01	ci left: 1.760572e-03	ci right 2.872668e-03	k: 68	n:30000
Cons ci ratio: 5.280792e-01	ci left: 1.352496e-03	ci right 2.347965e-03	k: 54	n:30000
KS ci ratio: 6.327110e-02	ci left: 1.098328e-01	ci right 1.170422e-01	k: 3402	n:30000
CACNA1A   30000 perm   7 sec   (4132 perm/sec)   p_kst 1.134000e-01   p_cons 1.800000e-03   p_joint 2.266667e-03

Joint ci ratio: 3.857467e-01	ci left: 2.079684e-03	ci right 3.094681e-03	k: 102	n:40000
Cons ci ratio: 4.647996e-01	ci left: 1.364457e-03	ci right 2.210510e-03	k: 70	n:40000
KS ci ratio: 5.476959e-02	ci left: 1.104071e-01	ci right 1.166491e-01	k: 4540	n:40000
CACNA1A   40000 perm   10 sec   (4031 perm/sec)   p_kst 1.135000e-01   p_cons 1.750000e-03   p_joint 2.550000e-03

Joint ci ratio: 3.206569e-01	ci left: 2.502884e-03	ci right 3.476241e-03	k: 148	n:50000
Cons ci ratio: 3.821471e-01	ci left: 1.699817e-03	ci right 2.519713e-03	k: 104	n:50000
KS ci ratio: 4.883840e-02	ci left: 1.113455e-01	ci right 1.169394e-01	k: 5706	n:50000
CACNA1A   50000 perm   13 sec   (3950 perm/sec)   p_kst 1.141200e-01   p_cons 2.080000e-03   p_joint 2.960000e-03

Joint ci ratio: 2.098255e-01	ci left: 5.176470e-03	ci right 6.405408e-03	k: 346	n:60000
Cons ci ratio: 3.382553e-01	ci left: 1.856288e-03	ci right 2.626461e-03	k: 133	n:60000
KS ci ratio: 4.465833e-02	ci left: 1.112529e-01	ci right 1.163512e-01	k: 6827	n:60000
CACNA1A   60000 perm   15 sec   (3898 perm/sec)   p_kst 1.137833e-01   p_cons 2.216667e-03   p_joint 5.766667e-03

Joint ci ratio: 1.930258e-01	ci left: 5.291679e-03	ci right 6.435580e-03	k: 409	n:70000
Cons ci ratio: 3.134990e-01	ci left: 1.879718e-03	ci right 2.591124e-03	k: 155	n:70000
KS ci ratio: 4.136027e-02	ci left: 1.113714e-01	ci right 1.160892e-01	k: 7960	n:70000
CACNA1A   70000 perm   18 sec   (3849 perm/sec)   p_kst 1.137143e-01   p_cons 2.214286e-03   p_joint 5.842857e-03

Joint ci ratio: 2.870922e-01	ci left: 1.991570e-03	ci right 2.670328e-03	k: 185	n:80000
Cons ci ratio: 2.951541e-01	ci left: 1.875679e-03	ci right 2.536253e-03	k: 175	n:80000
KS ci ratio: 3.864418e-02	ci left: 1.117559e-01	ci right 1.161721e-01	k: 9116	n:80000
CACNA1A   80000 perm   21 sec   (3793 perm/sec)   p_kst 1.139500e-01   p_cons 2.187500e-03   p_joint 2.312500e-03

Joint ci ratio: 2.610050e-01	ci left: 2.173934e-03	ci right 2.836560e-03	k: 224	n:90000
Cons ci ratio: 2.670208e-01	ci left: 2.070160e-03	ci right 2.718135e-03	k: 214	n:90000
KS ci ratio: 3.643937e-02	ci left: 1.118534e-01	ci right 1.160159e-01	k: 10253	n:90000
CACNA1A   90000 perm   24 sec   (3743 perm/sec)   p_kst 1.139222e-01   p_cons 2.377778e-03   p_joint 2.488889e-03

Joint ci ratio: 2.461351e-01	ci left: 2.218766e-03	ci right 2.850640e-03	k: 252	n:100000
Cons ci ratio: 2.516808e-01	ci left: 2.115612e-03	ci right 2.733814e-03	k: 241	n:100000
KS ci ratio: 3.464555e-02	ci left: 1.115204e-01	ci right 1.154621e-01	k: 11348	n:100000
CACNA1A   100000 perm   27 sec   (3693 perm/sec)   p_kst 1.134800e-01   p_cons 2.410000e-03   p_joint 2.520000e-03

Joint ci ratio: 2.369535e-01	ci left: 2.187873e-03	ci right 2.784296e-03	k: 272	n:110000
Cons ci ratio: 2.423528e-01	ci left: 2.085318e-03	ci right 2.668687e-03	k: 260	n:110000
KS ci ratio: 3.301520e-02	ci left: 1.117214e-01	ci right 1.154808e-01	k: 12495	n:110000
CACNA1A   110000 perm   30 sec   (3644 perm/sec)   p_kst 1.135909e-01   p_cons 2.363636e-03   p_joint 2.472727e-03

Joint ci ratio: 2.319239e-01	ci left: 2.099665e-03	ci right 2.658151e-03	k: 284	n:120000
Cons ci ratio: 2.378530e-01	ci left: 1.989850e-03	ci right 2.534651e-03	k: 270	n:120000
KS ci ratio: 3.160443e-02	ci left: 1.118346e-01	ci right 1.154341e-01	k: 13635	n:120000
CACNA1A   120000 perm   34 sec   (3579 perm/sec)   p_kst 1.136250e-01   p_cons 2.250000e-03   p_joint 2.366667e-03

Joint ci ratio: 2.264377e-01	ci left: 2.039655e-03	ci right 2.567553e-03	k: 298	n:130000
Cons ci ratio: 2.327652e-01	ci left: 1.923643e-03	ci right 2.437429e-03	k: 282	n:130000
KS ci ratio: 3.039048e-02	ci left: 1.117346e-01	ci right 1.151903e-01	k: 14749	n:130000
CACNA1A   130000 perm   37 sec   (3534 perm/sec)   p_kst 1.134538e-01   p_cons 2.169231e-03   p_joint 2.292308e-03

Joint ci ratio: 2.195721e-01	ci left: 2.022098e-03	ci right 2.527442e-03	k: 317	n:140000
Cons ci ratio: 2.257012e-01	ci left: 1.907427e-03	ci right 2.399271e-03	k: 300	n:140000
KS ci ratio: 2.928045e-02	ci left: 1.118287e-01	ci right 1.151588e-01	k: 15888	n:140000
CACNA1A   140000 perm   40 sec   (3487 perm/sec)   p_kst 1.134857e-01   p_cons 2.142857e-03   p_joint 2.264286e-03

Joint ci ratio: 2.132953e-01	ci left: 2.007091e-03	ci right 2.492470e-03	k: 336	n:150000
Cons ci ratio: 2.195888e-01	ci left: 1.887277e-03	ci right 2.358966e-03	k: 317	n:150000
KS ci ratio: 2.825479e-02	ci left: 1.121175e-01	ci right 1.153374e-01	k: 17058	n:150000
CACNA1A   150000 perm   44 sec   (3448 perm/sec)   p_kst 1.137200e-01   p_cons 2.113333e-03   p_joint 2.240000e-03

Joint ci ratio: 2.078204e-01	ci left: 1.988215e-03	ci right 2.455117e-03	k: 354	n:160000
Cons ci ratio: 2.139475e-01	ci left: 1.869802e-03	ci right 2.323543e-03	k: 334	n:160000
KS ci ratio: 2.735781e-02	ci left: 1.121671e-01	ci right 1.152844e-01	k: 18195	n:160000
CACNA1A   160000 perm   47 sec   (3410 perm/sec)   p_kst 1.137187e-01   p_cons 2.087500e-03   p_joint 2.212500e-03

Joint ci ratio: 2.013982e-01	ci left: 1.999625e-03	ci right 2.452912e-03	k: 377	n:170000
Cons ci ratio: 2.072498e-01	ci left: 1.882403e-03	ci right 2.323088e-03	k: 356	n:170000
KS ci ratio: 2.654117e-02	ci left: 1.122122e-01	ci right 1.152363e-01	k: 19332	n:170000
CACNA1A   170000 perm   50 sec   (3372 perm/sec)   p_kst 1.137176e-01   p_cons 2.094118e-03   p_joint 2.217647e-03

Joint ci ratio: 1.972699e-01	ci left: 1.972985e-03	ci right 2.409963e-03	k: 393	n:180000
Cons ci ratio: 2.027589e-01	ci left: 1.862149e-03	ci right 2.287476e-03	k: 372	n:180000
KS ci ratio: 2.582702e-02	ci left: 1.119939e-01	ci right 1.149297e-01	k: 20422	n:180000
CACNA1A   180000 perm   54 sec   (3337 perm/sec)   p_kst 1.134556e-01   p_cons 2.066667e-03   p_joint 2.183333e-03

Joint ci ratio: 1.922145e-01	ci left: 1.974282e-03	ci right 2.399031e-03	k: 414	n:190000
Cons ci ratio: 1.977850e-01	ci left: 1.859127e-03	ci right 2.272091e-03	k: 391	n:190000
KS ci ratio: 2.512281e-02	ci left: 1.121555e-01	ci right 1.150142e-01	k: 21580	n:190000
CACNA1A   190000 perm   58 sec   (3302 perm/sec)   p_kst 1.135789e-01   p_cons 2.057895e-03   p_joint 2.178947e-03

Joint ci ratio: 1.870992e-01	ci left: 1.985109e-03	ci right 2.399531e-03	k: 437	n:200000
Cons ci ratio: 1.924575e-01	ci left: 1.870799e-03	ci right 2.273852e-03	k: 413	n:200000
KS ci ratio: 2.448355e-02	ci left: 1.122174e-01	ci right 1.150038e-01	k: 22721	n:200000
CACNA1A   200000 perm   61 sec   (3266 perm/sec)   p_kst 1.136050e-01   p_cons 2.065000e-03   p_joint 2.185000e-03

Joint ci ratio: 1.827694e-01	ci left: 1.985951e-03	ci right 2.389892e-03	k: 458	n:210000
Cons ci ratio: 1.877544e-01	ci left: 1.876955e-03	ci right 2.270326e-03	k: 434	n:210000
KS ci ratio: 2.390034e-02	ci left: 1.121937e-01	ci right 1.149123e-01	k: 23845	n:210000
CACNA1A   210000 perm   65 sec   (3231 perm/sec)   p_kst 1.135476e-01   p_cons 2.066667e-03   p_joint 2.180952e-03

Joint ci ratio: 1.796673e-01	ci left: 1.965107e-03	ci right 2.357286e-03	k: 474	n:220000
Cons ci ratio: 1.846011e-01	ci left: 1.856641e-03	ci right 2.238488e-03	k: 449	n:220000
KS ci ratio: 2.334742e-02	ci left: 1.122542e-01	ci right 1.149105e-01	k: 24987	n:220000
CACNA1A   220000 perm   69 sec   (3196 perm/sec)   p_kst 1.135773e-01   p_cons 2.040909e-03   p_joint 2.154545e-03

Joint ci ratio: 1.756456e-01	ci left: 1.971067e-03	ci right 2.354696e-03	k: 496	n:230000
Cons ci ratio: 1.806309e-01	ci left: 1.858899e-03	ci right 2.232089e-03	k: 469	n:230000
KS ci ratio: 2.281887e-02	ci left: 1.124183e-01	ci right 1.150175e-01	k: 26154	n:230000
CACNA1A   230000 perm   73 sec   (3163 perm/sec)   p_kst 1.137130e-01   p_cons 2.039130e-03   p_joint 2.156522e-03

Joint ci ratio: 1.708952e-01	ci left: 2.000549e-03	ci right 2.378301e-03	k: 524	n:240000
Cons ci ratio: 1.761872e-01	ci left: 1.876981e-03	ci right 2.243544e-03	k: 493	n:240000
KS ci ratio: 2.236023e-02	ci left: 1.122501e-01	ci right 1.147926e-01	k: 27244	n:240000
CACNA1A   240000 perm   77 sec   (3129 perm/sec)   p_kst 1.135167e-01   p_cons 2.054167e-03   p_joint 2.183333e-03

Joint ci ratio: 1.669651e-01	ci left: 2.016301e-03	ci right 2.387391e-03	k: 549	n:250000
Cons ci ratio: 1.722227e-01	ci left: 1.889892e-03	ci right 2.249808e-03	k: 516	n:250000
KS ci ratio: 2.190202e-02	ci left: 1.123347e-01	ci right 1.148263e-01	k: 28394	n:250000
CACNA1A   250000 perm   81 sec   (3095 perm/sec)   p_kst 1.135760e-01   p_cons 2.064000e-03   p_joint 2.196000e-03

Joint ci ratio: 1.645901e-01	ci left: 1.997735e-03	ci right 2.359660e-03	k: 565	n:260000
Cons ci ratio: 1.696196e-01	ci left: 1.876109e-03	ci right 2.227447e-03	k: 532	n:260000
KS ci ratio: 2.146596e-02	ci left: 1.124592e-01	ci right 1.149032e-01	k: 29556	n:260000
CACNA1A   260000 perm   85 sec   (3063 perm/sec)   p_kst 1.136769e-01   p_cons 2.046154e-03   p_joint 2.173077e-03

Joint ci ratio: 1.617576e-01	ci left: 1.994794e-03	ci right 2.349361e-03	k: 585	n:270000
Cons ci ratio: 1.668268e-01	ci left: 1.870483e-03	ci right 2.214421e-03	k: 550	n:270000
KS ci ratio: 2.105611e-02	ci left: 1.125639e-01	ci right 1.149629e-01	k: 30715	n:270000
CACNA1A   270000 perm   89 sec   (3031 perm/sec)   p_kst 1.137593e-01   p_cons 2.037037e-03   p_joint 2.166667e-03

Joint ci ratio: 1.588040e-01	ci left: 1.998971e-03	ci right 2.347176e-03	k: 607	n:280000
Cons ci ratio: 1.641676e-01	ci left: 1.865302e-03	ci right 2.202281e-03	k: 568	n:280000
KS ci ratio: 2.068168e-02	ci left: 1.125371e-01	ci right 1.148924e-01	k: 31839	n:280000
CACNA1A   280000 perm   93 sec   (2997 perm/sec)   p_kst 1.137107e-01   p_cons 2.028571e-03   p_joint 2.167857e-03

Joint ci ratio: 1.567564e-01	ci left: 1.983034e-03	ci right 2.323589e-03	k: 623	n:290000
Cons ci ratio: 1.619082e-01	ci left: 1.853902e-03	ci right 2.183763e-03	k: 584	n:290000
KS ci ratio: 2.032620e-02	ci left: 1.125159e-01	ci right 1.148298e-01	k: 32964	n:290000
CACNA1A   290000 perm   98 sec   (2966 perm/sec)   p_kst 1.136690e-01   p_cons 2.013793e-03   p_joint 2.148276e-03

Joint ci ratio: 1.540639e-01	ci left: 1.987415e-03	ci right 2.322319e-03	k: 645	n:300000
Cons ci ratio: 1.590779e-01	ci left: 1.859294e-03	ci right 2.183779e-03	k: 605	n:300000
KS ci ratio: 1.998281e-02	ci left: 1.125528e-01	ci right 1.148280e-01	k: 34106	n:300000
CACNA1A   300000 perm   102 sec   (2936 perm/sec)   p_kst 1.136867e-01   p_cons 2.016667e-03   p_joint 2.150000e-03

Joint ci ratio: 1.512788e-01	ci left: 1.997767e-03	ci right 2.327779e-03	k: 669	n:310000
Cons ci ratio: 1.562663e-01	ci left: 1.867485e-03	ci right 2.187100e-03	k: 627	n:310000
KS ci ratio: 1.965060e-02	ci left: 1.126456e-01	ci right 1.148843e-01	k: 35266	n:310000
CACNA1A   310000 perm   107 sec   (2903 perm/sec)   p_kst 1.137613e-01   p_cons 2.022581e-03   p_joint 2.158065e-03

Joint ci ratio: 1.500546e-01	ci left: 1.968414e-03	ci right 2.290709e-03	k: 680	n:320000
Cons ci ratio: 1.550393e-01	ci left: 1.839157e-03	ci right 2.151222e-03	k: 637	n:320000
KS ci ratio: 1.935272e-02	ci left: 1.125429e-01	ci right 1.147453e-01	k: 36365	n:320000
CACNA1A   320000 perm   111 sec   (2870 perm/sec)   p_kst 1.136406e-01   p_cons 1.990625e-03   p_joint 2.125000e-03

Joint ci ratio: 1.477932e-01	ci left: 1.970030e-03	ci right 2.287299e-03	k: 701	n:330000
Cons ci ratio: 1.525487e-01	ci left: 1.844613e-03	ci right 2.152116e-03	k: 658	n:330000
KS ci ratio: 1.905278e-02	ci left: 1.126067e-01	ci right 1.147758e-01	k: 37517	n:330000
CACNA1A   330000 perm   116 sec   (2839 perm/sec)   p_kst 1.136879e-01   p_cons 1.993939e-03   p_joint 2.124242e-03

Joint ci ratio: 1.455302e-01	ci left: 1.974420e-03	ci right 2.287104e-03	k: 723	n:340000
Cons ci ratio: 1.501745e-01	ci left: 1.849786e-03	ci right 2.152920e-03	k: 679	n:340000
KS ci ratio: 1.876089e-02	ci left: 1.127256e-01	ci right 1.148633e-01	k: 38689	n:340000
CACNA1A   340000 perm   121 sec   (2809 perm/sec)   p_kst 1.137912e-01   p_cons 1.997059e-03   p_joint 2.126471e-03

Joint ci ratio: 1.580593e-01	ci left: 1.615615e-03	ci right 1.895595e-03	k: 613	n:350000
Cons ci ratio: 1.475917e-01	ci left: 1.862953e-03	ci right 2.162531e-03	k: 703	n:350000
KS ci ratio: 1.848988e-02	ci left: 1.127525e-01	ci right 1.148596e-01	k: 39831	n:350000
CACNA1A   350000 perm   126 sec   (2779 perm/sec)   p_kst 1.138029e-01   p_cons 2.008571e-03   p_joint 1.751429e-03

Joint ci ratio: 1.412997e-01	ci left: 1.982568e-03	ci right 2.286646e-03	k: 767	n:360000
Cons ci ratio: 1.456397e-01	ci left: 1.862045e-03	ci right 2.157174e-03	k: 722	n:360000
KS ci ratio: 1.823454e-02	ci left: 1.127312e-01	ci right 1.148084e-01	k: 40956	n:360000
CACNA1A   360000 perm   131 sec   (2749 perm/sec)   p_kst 1.137667e-01   p_cons 2.005556e-03   p_joint 2.130556e-03

Joint ci ratio: 1.393182e-01	ci left: 1.986357e-03	ci right 2.286390e-03	k: 789	n:370000
Cons ci ratio: 1.437632e-01	ci left: 1.861212e-03	ci right 2.152081e-03	k: 741	n:370000
KS ci ratio: 1.799023e-02	ci left: 1.127030e-01	ci right 1.147517e-01	k: 42078	n:370000
CACNA1A   370000 perm   136 sec   (2716 perm/sec)   p_kst 1.137243e-01   p_cons 2.002703e-03   p_joint 2.132432e-03

Joint ci ratio: 6.163791e-02	ci left: 1.020684e-02	ci right 1.085855e-02	k: 4001	n:380000
Cons ci ratio: 8.465842e-02	ci left: 5.372925e-03	ci right 5.850450e-03	k: 2131	n:380000
KS ci ratio: 1.775061e-02	ci left: 1.127316e-01	ci right 1.147532e-01	k: 43221	n:380000
CACNA1A   380000 perm   141 sec   (2689 perm/sec)   p_kst 1.137395e-01   p_cons 5.607895e-03   p_joint 1.052895e-02

Outputting figure to mutsig2_images.part000000000028/CACNA1A.2_7823_380000_0.11374_0.0056079_0.010529.png
                gene_name: CACNA1A
               theta_stop: 0.085 
                    nperm: 380000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.0056 
      ci_cons_bounds_left: 0.0054 
     ci_cons_bounds_right: 0.0059 
                  p_joint: 0.011 
     ci_joint_bounds_left: 0.010 
    ci_joint_bounds_right: 0.011 

Current progress: 67 percent done.
CACNA1G
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.537586e-02	ci left: 8.598813e-01	ci right 8.733044e-01	k: 8667	n:10000
Cons ci ratio: 1.455385e-02	ci left: 8.723452e-01	ci right 8.852332e-01	k: 8789	n:10000
KS ci ratio: 3.719929e-02	ci left: 5.162571e-01	ci right 5.359277e-01	k: 5261	n:10000
CACNA1G   10000 perm   2 sec   (5014 perm/sec)   p_kst 5.261000e-01   p_cons 8.789000e-01   p_joint 8.667000e-01

Outputting figure to mutsig2_images.part000000000028/CACNA1G.2_7553_10000_0.5261_0.8789_0.8667.png
                gene_name: CACNA1G
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.53 
        ci_ks_bounds_left: 0.52 
       ci_ks_bounds_right: 0.54 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.86 
    ci_joint_bounds_right: 0.87 

Current progress: 83 percent done.
CACNA2D1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.550165e-02	ci left: 2.549845e-01	ci right 2.723533e-01	k: 2636	n:10000
Cons ci ratio: 1.008704e-01	ci left: 1.245431e-01	ci right 1.378726e-01	k: 1311	n:10000
KS ci ratio: 1.753445e-02	ci left: 8.258483e-01	ci right 8.405571e-01	k: 8333	n:10000
CACNA2D1   10000 perm   2 sec   (6314 perm/sec)   p_kst 8.333000e-01   p_cons 1.311000e-01   p_joint 2.636000e-01

Joint ci ratio: 3.435139e-02	ci left: 3.875179e-01	ci right 4.011129e-01	k: 7886	n:20000
Cons ci ratio: 7.270505e-02	ci left: 1.222671e-01	ci right 1.315416e-01	k: 2537	n:20000
KS ci ratio: 1.247617e-02	ci left: 8.262899e-01	ci right 8.367135e-01	k: 16631	n:20000
CACNA2D1   20000 perm   4 sec   (5310 perm/sec)   p_kst 8.315500e-01   p_cons 1.268500e-01   p_joint 3.943000e-01

Outputting figure to mutsig2_images.part000000000028/CACNA2D1.2_3432_20000_0.83155_0.12685_0.3943.png
                gene_name: CACNA2D1
               theta_stop: 0.073 
                    nperm: 20000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.83 
       ci_ks_bounds_right: 0.84 
                   p_cons: 0.13 
      ci_cons_bounds_left: 0.12 
     ci_cons_bounds_right: 0.13 
                  p_joint: 0.39 
     ci_joint_bounds_left: 0.39 
    ci_joint_bounds_right: 0.40 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000028
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 28 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1723>
Subject: Job 8704135: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1723>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000029> was used as the working directory.
Started at Thu Nov 15 19:31:40 2012
Results reported at Thu Nov 15 19:33:29 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000029.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000029.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 29  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000029.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :     97.64 sec.
    Max Memory :      5479 MB
    Max Swap   :      8255 MB

    Max Processes  :         7
    Max Threads    :        67

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
29
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 29
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 29: processing genes 2534 - 2623
Calculating significance of each gene.
Using projection method.
2534	CACNG5	1
2535	CACNG6	1
2536	CACNG7	1
2537	CACNG8	1
2538	CACYBP	1
2539	CAD	1
2540	CADM1	1.532925e-01
2541	CADM2	1
2542	CADM3	1
2543	CADM4	1
2544	CADPS	1
2545	CADPS2	1
2546	CAGE1	1
2547	CALB1	1
2548	CALB2	1
2549	CALCA	1
2550	CALCB	2.069618e-02
2551	CALCOCO1	1
2552	CALCOCO2	1
2553	CALCR	9.444389e-02
2554	CALCRL	1
2555	CALD1	1.836652e-02
2556	CALHM1	1
2557	CALHM2	5.088256e-02
2558	CALM1	1
2559	CALM2	1
2560	CALM3	1
2561	CALML3	1
2562	CALML4	1
2563	CALML5	1
2564	CALML6	1
2565	CALN1	1
2566	CALR	1
2567	CALR3	1
2568	CALU	1
2569	CALY	1
2570	CAMK1	1
2571	CAMK1D	1
2572	CAMK1G	1
2573	CAMK2A	1.784495e-01
2574	CAMK2B	1.457678e-01
2575	CAMK2D	1
2576	CAMK2G	1
2577	CAMK2N1	1
2578	CAMK2N2	1
2579	CAMK4	1
2580	CAMKK1	1
2581	CAMKK2	1.978647e-01
2582	CAMKV	2.094749e-01
2583	CAMLG	1
2584	CAMP	1
2585	CAMSAP1	1.571587e-01
2586	CAMSAP1L1	4.813082e-01
2587	CAMTA1	1
2588	CAMTA2	1
2589	CAND1	2.058738e-02
2590	CAND2	1
2591	CANT1	1
2592	CANX	2.036624e-01
2593	CAP1	1
2594	CAP2	1
2595	CAPG	1
2596	CAPN1	1
2597	CAPN10	1
2598	CAPN11	1
2599	CAPN12	1
2600	CAPN13	1.045219e-01
2601	CAPN2	1
2602	CAPN3	1
2603	CAPN5	1
2604	CAPN6	1.287734e-01
2605	CAPN7	1
2606	CAPN9	1
2607	CAPNS1	1
2608	CAPNS2	1
2609	CAPRIN1	1
2610	CAPRIN2	1
2611	CAPS	1
2612	CAPS2	1
2613	CAPSL	1
2614	CAPZA1	1
2615	CAPZA2	1
2616	CAPZA3	9.315417e-02
2617	CAPZB	1
2618	CARD10	2.055155e-01
2619	CARD11	1
2620	CARD14	1
2621	CARD16	1
2622	CARD17	1
2623	CARD18	1
Done

Running MutSig 2:
Scatter job 29: processing genes 2534 - 2623
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CAND1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.887637e-02	ci left: 6.387484e-01	ci right 6.575652e-01	k: 6482	n:10000
KS ci ratio: 2.774561e-02	ci left: 6.568600e-01	ci right 6.754431e-01	k: 6662	n:10000
CAND1   10000 perm   2 sec   (5913 perm/sec)   p_kst 6.662000e-01   p_cons 6.482000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000029/CAND1.3_3753_10000_0.6662_0.6482_1.png
                gene_name: CAND1
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.67 
        ci_ks_bounds_left: 0.66 
       ci_ks_bounds_right: 0.68 
                   p_cons: 0.65 
      ci_cons_bounds_left: 0.64 
     ci_cons_bounds_right: 0.66 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
CALD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.046673e-02	ci left: 7.776263e-01	ci right 7.938069e-01	k: 7858	n:10000
Cons ci ratio: 2.797044e-02	ci left: 6.532365e-01	ci right 6.718687e-01	k: 6626	n:10000
KS ci ratio: 1.108203e-01	ci left: 1.050046e-01	ci right 1.174229e-01	k: 1111	n:10000
CALD1   10000 perm   1 sec   (6879 perm/sec)   p_kst 1.111000e-01   p_cons 6.626000e-01   p_joint 7.858000e-01

Joint ci ratio: 4.069126e-02	ci left: 3.104538e-01	ci right 3.233994e-01	k: 6338	n:20000
Cons ci ratio: 1.975232e-02	ci left: 6.566016e-01	ci right 6.697509e-01	k: 13264	n:20000
KS ci ratio: 7.738791e-02	ci left: 1.092827e-01	ci right 1.181299e-01	k: 2273	n:20000
CALD1   20000 perm   3 sec   (6155 perm/sec)   p_kst 1.136500e-01   p_cons 6.632000e-01   p_joint 3.169000e-01

Outputting figure to mutsig2_images.part000000000029/CALD1.2_2491_20000_0.11365_0.6632_0.3169.png
                gene_name: CALD1
               theta_stop: 0.077 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.66 
     ci_cons_bounds_right: 0.67 
                  p_joint: 0.32 
     ci_joint_bounds_left: 0.31 
    ci_joint_bounds_right: 0.32 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000029
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 29 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1701>
Subject: Job 8704137: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1701>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000030> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000030.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000030.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 30  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000030.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    170.85 sec.
    Max Memory :      5825 MB
    Max Swap   :      8481 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
30
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 30
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 30: processing genes 2624 - 2714
Calculating significance of each gene.
Using projection method.
2624	CARD6	1
2625	CARD8	1
2626	CARD9	1
2627	CARHSP1	1
2628	CARKD	1
2629	CARM1	1
2630	CARNS1	1
2631	CARS	1
2632	CARS2	1
2633	CARTPT	1
2634	CASC1	1
2635	CASC3	1
2636	CASC4	4.632452e-02
In gene CASC5 the following bins exceed PROBCAP:
    THCA-BJ-A0ZJ-TP	categ 4	N = 4378    n = 1	mu =   6.81e-08
2637	CASC5	3.126531e-01
2638	CASD1	1.318655e-01
2639	CASK	1
2640	CASKIN1	1
2641	CASKIN2	1
2642	CASP1	1
2643	CASP10	1
In gene CASP14 the following bins exceed PROBCAP:
    THCA-IM-A3EB-TP	categ 6	N = 734     n = 1	mu =   6.71e-08
2644	CASP14	2.162620e-02
2645	CASP2	1
2646	CASP3	1
2647	CASP4	1
2648	CASP5	9.333407e-02
2649	CASP6	1.273857e-01
2650	CASP7	1
2651	CASP8	1
2652	CASP8AP2	1
2653	CASP9	1
2654	CASQ1	1
2655	CASQ2	1
2656	CASR	1
2657	CASS4	1
2658	CAST	1
2659	CASZ1	1.771770e-01
2660	CAT	1
2661	CATSPER1	1
2662	CATSPER2	1
2663	CATSPER3	1
2664	CATSPER4	1
2665	CATSPERB	6.474139e-02
2666	CATSPERG	1
2667	CAV1	1
2668	CAV2	1
2669	CAV3	1
2670	CBARA1	1
2671	CBFA2T2	1.367401e-01
2672	CBFA2T3	1
2673	CBFB	1
2674	CBL	1
2675	CBLB	1
2676	CBLC	1
2677	CBLL1	1
2678	CBLN1	1
2679	CBLN2	1
2680	CBLN3	6.777953e-02
2681	CBLN4	1
2682	CBR1	1
2683	CBR3	1
2684	CBR4	1
2685	CBS	1
2686	CBWD1	1
2687	CBWD2	1
2688	CBWD6	1
2689	CBX1	8.910951e-02
2690	CBX2	1
2691	CBX3	1
2692	CBX4	1
2693	CBX5	1
2694	CBX6	1.042341e-01
2695	CBX7	1
2696	CBX8	1
2697	CBY1	1
2698	CC2D1A	1
2699	CC2D1B	1.682374e-01
2700	CC2D2A	1
2701	CC2D2B	1
2702	CCAR1	1
2703	CCBE1	1
2704	CCBL1	1
2705	CCBL2	1
2706	CCBP2	1
2707	CCDC101	1
2708	CCDC102A	1
2709	CCDC102B	1
2710	CCDC103	1
2711	CCDC104	1
2712	CCDC105	1
2713	CCDC106	1.352355e-01
2714	CCDC107	1
Done

Running MutSig 2:
Scatter job 30: processing genes 2624 - 2714
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CASZ1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.226904e-02	ci left: 4.524903e-01	ci right 4.721317e-01	k: 4623	n:10000
Cons ci ratio: 6.411390e-02	ci left: 2.632958e-01	ci right 2.808372e-01	k: 2720	n:10000
KS ci ratio: 4.821140e-02	ci left: 3.882876e-01	ci right 4.075719e-01	k: 3979	n:10000
CASZ1   10000 perm   2 sec   (4774 perm/sec)   p_kst 3.979000e-01   p_cons 2.720000e-01   p_joint 4.623000e-01

Outputting figure to mutsig2_images.part000000000030/CASZ1.2_5356_10000_0.3979_0.272_0.4623.png
                gene_name: CASZ1
               theta_stop: 0.064 
                    nperm: 10000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.27 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.28 
                  p_joint: 0.46 
     ci_joint_bounds_left: 0.45 
    ci_joint_bounds_right: 0.47 

Current progress: 50 percent done.
CATSPERB
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.247176e-02	ci left: 3.486956e-01	ci right 3.675871e-01	k: 3581	n:10000
Cons ci ratio: 5.969375e-02	ci left: 2.922170e-01	ci right 3.102989e-01	k: 3012	n:10000
KS ci ratio: 5.143806e-02	ci left: 3.578414e-01	ci right 3.768359e-01	k: 3673	n:10000
CATSPERB   10000 perm   3 sec   (2938 perm/sec)   p_kst 3.673000e-01   p_cons 3.012000e-01   p_joint 3.581000e-01

Outputting figure to mutsig2_images.part000000000030/CATSPERB.2_3455_10000_0.3673_0.3012_0.3581.png
                gene_name: CATSPERB
               theta_stop: 0.060 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.30 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.31 
                  p_joint: 0.36 
     ci_joint_bounds_left: 0.35 
    ci_joint_bounds_right: 0.37 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000030
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 30 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1708>
Subject: Job 8704139: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1708>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000031> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 22:36:20 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000031.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000031.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 31  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000031.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  11231.19 sec.
    Max Memory :      6040 MB
    Max Swap   :      8541 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
31
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 31
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 31: processing genes 2715 - 2804
Calculating significance of each gene.
Using projection method.
2715	CCDC108	2.788916e-01
2716	CCDC109A	1
2717	CCDC109B	1
2718	CCDC11	1
2719	CCDC110	1
2720	CCDC111	1
2721	CCDC112	1
2722	CCDC113	1
2723	CCDC114	1
2724	CCDC115	1
2725	CCDC116	1
2726	CCDC117	1
2727	CCDC12	1
2728	CCDC120	1
2729	CCDC121	1
2730	CCDC122	1
2731	CCDC123	1
2732	CCDC124	1
2733	CCDC125	1
2734	CCDC126	1
2735	CCDC127	1
2736	CCDC129	5.460848e-02
2737	CCDC13	1
2738	CCDC130	1
2739	CCDC132	9.706674e-02
2740	CCDC134	1
2741	CCDC135	1
2742	CCDC136	1
2743	CCDC137	2.926831e-02
2744	CCDC138	1
2745	CCDC14	1
2746	CCDC140	1
2747	CCDC141	1
2748	CCDC142	2.484977e-01
2749	CCDC144A	1
2750	CCDC144B	1
2751	CCDC144NL	1
2752	CCDC146	1
2753	CCDC147	1
2754	CCDC148	1
2755	CCDC149	1
2756	CCDC15	2.045013e-05
2757	CCDC150	1
2758	CCDC151	1
2759	CCDC153	1
2760	CCDC155	7.935278e-02
2761	CCDC157	1.312628e-02
2762	CCDC158	1
In gene CCDC159 the following bins exceed PROBCAP:
    THCA-DE-A3KN-TP	categ 6	N = 652     n = 1	mu =   1.00e-07
2763	CCDC159	3.233624e-02
2764	CCDC160	1
2765	CCDC17	1
2766	CCDC18	1
2767	CCDC19	3.365891e-02
2768	CCDC21	1
2769	CCDC22	1
2770	CCDC23	1
2771	CCDC24	3.278383e-02
2772	CCDC25	1
2773	CCDC27	7.355687e-02
2774	CCDC28A	1
2775	CCDC28B	1
2776	CCDC3	1
2777	CCDC30	1.001377e-01
2778	CCDC33	1
2779	CCDC34	1
2780	CCDC36	1
2781	CCDC37	1
2782	CCDC38	2.218392e-01
In gene CCDC39 the following bins exceed PROBCAP:
    THCA-FK-A3SE-TP	categ 6	N = 1918    n = 1	mu =   1.00e-07
2783	CCDC39	2.173622e-03
2784	CCDC40	3.470090e-01
2785	CCDC41	5.815695e-02
2786	CCDC42	3.491908e-02
2787	CCDC43	1
2788	CCDC45	2.098131e-01
2789	CCDC46	1
2790	CCDC47	1
2791	CCDC48	1
2792	CCDC50	1
2793	CCDC51	1
2794	CCDC52	3.005117e-01
2795	CCDC53	1
2796	CCDC54	1
2797	CCDC55	1
2798	CCDC56	1
2799	CCDC57	1
2800	CCDC58	1
2801	CCDC59	1
2802	CCDC6	2.011289e-01
2803	CCDC60	1
2804	CCDC61	1
Done

Running MutSig 2:
Scatter job 31: processing genes 2715 - 2804
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CCDC15
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.971815e-01	ci left: 1.455775e-02	ci right 1.972903e-02	k: 170	n:10000
Cons ci ratio: 1.568863e-03	ci left: 9.975272e-01	ci right 9.991602e-01	k: 9985	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
CCDC15   10000 perm   2 sec   (4664 perm/sec)   p_kst 1.000000e-04   p_cons 9.985000e-01   p_joint 1.700000e-02

Joint ci ratio: 3.243481e-01	ci left: 6.075351e-03	ci right 8.471257e-03	k: 144	n:20000
Cons ci ratio: 1.056126e-03	ci left: 9.979772e-01	ci right 9.990695e-01	k: 19972	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
CCDC15   20000 perm   9 sec   (2108 perm/sec)   p_kst 5.000000e-05   p_cons 9.986000e-01   p_joint 7.200000e-03

Joint ci ratio: 2.971666e-01	ci left: 4.910451e-03	ci right 6.654022e-03	k: 172	n:30000
Cons ci ratio: 8.473395e-04	ci left: 9.981464e-01	ci right 9.990191e-01	k: 29959	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
CCDC15   30000 perm   12 sec   (2564 perm/sec)   p_kst 3.333333e-05   p_cons 9.986333e-01   p_joint 5.733333e-03

Joint ci ratio: 2.939890e-01	ci left: 3.775082e-03	ci right 5.098450e-03	k: 176	n:40000
Cons ci ratio: 7.532609e-04	ci left: 9.981259e-01	ci right 9.988988e-01	k: 39942	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
CCDC15   40000 perm   14 sec   (2849 perm/sec)   p_kst 2.500000e-05   p_cons 9.985500e-01   p_joint 4.400000e-03

Joint ci ratio: 3.635368e-01	ci left: 1.899248e-03	ci right 2.760165e-03	k: 115	n:50000
Cons ci ratio: 6.884531e-04	ci left: 9.980979e-01	ci right 9.988022e-01	k: 49924	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
CCDC15   50000 perm   18 sec   (2750 perm/sec)   p_kst 2.000000e-05   p_cons 9.984800e-01   p_joint 2.300000e-03

Joint ci ratio: 3.488516e-01	ci left: 1.734437e-03	ci right 2.481702e-03	k: 125	n:60000
Cons ci ratio: 6.372687e-04	ci left: 9.980831e-01	ci right 9.987338e-01	k: 59906	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
CCDC15   60000 perm   21 sec   (2814 perm/sec)   p_kst 1.666667e-05   p_cons 9.984333e-01   p_joint 2.083333e-03

Joint ci ratio: 3.218789e-01	ci left: 1.774527e-03	ci right 2.467782e-03	k: 147	n:70000
Cons ci ratio: 5.877740e-04	ci left: 9.981219e-01	ci right 9.987213e-01	k: 69891	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
CCDC15   70000 perm   24 sec   (2944 perm/sec)   p_kst 1.428571e-05   p_cons 9.984429e-01   p_joint 2.100000e-03

Joint ci ratio: 3.321990e-01	ci left: 1.449402e-03	ci right 2.037678e-03	k: 138	n:80000
Cons ci ratio: 5.393912e-04	ci left: 9.982066e-01	ci right 9.987562e-01	k: 79880	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
CCDC15   80000 perm   26 sec   (3041 perm/sec)   p_kst 1.250000e-05   p_cons 9.985000e-01   p_joint 1.725000e-03

Joint ci ratio: 3.669070e-01	ci left: 1.034864e-03	ci right 1.509332e-03	k: 113	n:90000
Cons ci ratio: 4.988655e-04	ci left: 9.982851e-01	ci right 9.987930e-01	k: 89870	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
CCDC15   90000 perm   29 sec   (3110 perm/sec)   p_kst 1.111111e-05   p_cons 9.985556e-01   p_joint 1.255556e-03

Joint ci ratio: 4.200832e-01	ci left: 6.879448e-04	ci right 1.061986e-03	k: 86	n:100000
Cons ci ratio: 4.739897e-04	ci left: 9.982941e-01	ci right 9.987763e-01	k: 99855	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
CCDC15   100000 perm   32 sec   (3164 perm/sec)   p_kst 1.000000e-05   p_cons 9.985500e-01   p_joint 8.600000e-04

Joint ci ratio: 3.978384e-01	ci left: 7.069673e-04	ci right 1.065647e-03	k: 96	n:110000
Cons ci ratio: 4.539009e-04	ci left: 9.982922e-01	ci right 9.987536e-01	k: 109839	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
CCDC15   110000 perm   34 sec   (3202 perm/sec)   p_kst 9.090909e-06   p_cons 9.985364e-01   p_joint 8.727273e-04

Joint ci ratio: 3.384459e-01	ci left: 9.280642e-04	ci right 1.313366e-03	k: 133	n:120000
Cons ci ratio: 4.611930e-04	ci left: 9.981037e-01	ci right 9.985717e-01	k: 119802	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
CCDC15   120000 perm   37 sec   (3222 perm/sec)   p_kst 8.333333e-06   p_cons 9.983500e-01   p_joint 1.108333e-03

Joint ci ratio: 3.637990e-01	ci left: 7.303943e-04	ci right 1.061753e-03	k: 115	n:130000
Cons ci ratio: 4.486420e-04	ci left: 9.980689e-01	ci right 9.985238e-01	k: 129780	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
CCDC15   130000 perm   40 sec   (3235 perm/sec)   p_kst 7.692308e-06   p_cons 9.983077e-01   p_joint 8.846154e-04

Joint ci ratio: 3.622514e-01	ci left: 6.847114e-04	ci right 9.937104e-04	k: 116	n:140000
Cons ci ratio: 4.332317e-04	ci left: 9.980700e-01	ci right 9.985090e-01	k: 139762	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
CCDC15   140000 perm   43 sec   (3238 perm/sec)   p_kst 7.142857e-06   p_cons 9.983000e-01   p_joint 8.285714e-04

Joint ci ratio: 3.504682e-01	ci left: 6.876241e-04	ci right 9.855504e-04	k: 124	n:150000
Cons ci ratio: 4.193016e-04	ci left: 9.980712e-01	ci right 9.984959e-01	k: 149744	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
CCDC15   150000 perm   46 sec   (3243 perm/sec)   p_kst 6.666667e-06   p_cons 9.982933e-01   p_joint 8.266667e-04

Joint ci ratio: 3.533175e-01	ci left: 6.332491e-04	ci right 9.103587e-04	k: 122	n:160000
Cons ci ratio: 4.044019e-04	ci left: 9.980923e-01	ci right 9.985018e-01	k: 159729	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
CCDC15   160000 perm   49 sec   (3241 perm/sec)   p_kst 6.250000e-06   p_cons 9.983062e-01   p_joint 7.625000e-04

Joint ci ratio: 3.410587e-01	ci left: 6.443260e-04	ci right 9.143458e-04	k: 131	n:170000
Cons ci ratio: 3.868505e-04	ci left: 9.981485e-01	ci right 9.985401e-01	k: 169720	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
CCDC15   170000 perm   53 sec   (3233 perm/sec)   p_kst 5.882353e-06   p_cons 9.983529e-01   p_joint 7.705882e-04

Joint ci ratio: 3.436816e-01	ci left: 5.983717e-04	ci right 8.514903e-04	k: 129	n:180000
Cons ci ratio: 3.762491e-04	ci left: 9.981515e-01	ci right 9.985322e-01	k: 179703	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
CCDC15   180000 perm   56 sec   (3222 perm/sec)   p_kst 5.555556e-06   p_cons 9.983500e-01   p_joint 7.166667e-04

Joint ci ratio: 3.372591e-01	ci left: 5.909441e-04	ci right 8.352330e-04	k: 134	n:190000
Cons ci ratio: 3.658902e-04	ci left: 9.981598e-01	ci right 9.985300e-01	k: 189687	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
CCDC15   190000 perm   59 sec   (3207 perm/sec)   p_kst 5.263158e-06   p_cons 9.983526e-01   p_joint 7.052632e-04

Joint ci ratio: 3.335766e-01	ci left: 5.751328e-04	ci right 8.097315e-04	k: 137	n:200000
Cons ci ratio: 3.519885e-04	ci left: 9.982096e-01	ci right 9.985657e-01	k: 199679	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
CCDC15   200000 perm   63 sec   (3189 perm/sec)   p_kst 5.000000e-06   p_cons 9.983950e-01   p_joint 6.850000e-04

Joint ci ratio: 4.937983e-01	ci left: 2.263646e-04	ci right 3.784662e-04	k: 62	n:210000
Cons ci ratio: 3.439634e-04	ci left: 9.982096e-01	ci right 9.985574e-01	k: 209662	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
CCDC15   210000 perm   66 sec   (3170 perm/sec)   p_kst 4.761905e-06   p_cons 9.983905e-01   p_joint 2.952381e-04

Joint ci ratio: 4.861432e-01	ci left: 2.240424e-04	ci right 3.714694e-04	k: 64	n:220000
Cons ci ratio: 3.411619e-04	ci left: 9.981618e-01	ci right 9.985066e-01	k: 219635	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
CCDC15   220000 perm   70 sec   (3149 perm/sec)   p_kst 4.545455e-06   p_cons 9.983409e-01   p_joint 2.909091e-04

Joint ci ratio: 4.752985e-01	ci left: 2.257638e-04	ci right 3.699317e-04	k: 67	n:230000
Cons ci ratio: 3.298699e-04	ci left: 9.982052e-01	ci right 9.985386e-01	k: 229627	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
CCDC15   230000 perm   74 sec   (3127 perm/sec)   p_kst 4.347826e-06   p_cons 9.983783e-01   p_joint 2.913043e-04

Joint ci ratio: 5.018397e-01	ci left: 1.907816e-04	ci right 3.217880e-04	k: 60	n:240000
Cons ci ratio: 3.207372e-04	ci left: 9.982318e-01	ci right 9.985559e-01	k: 239616	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
CCDC15   240000 perm   77 sec   (3104 perm/sec)   p_kst 4.166667e-06   p_cons 9.984000e-01   p_joint 2.500000e-04

Joint ci ratio: 4.938104e-01	ci left: 1.901453e-04	ci right 3.179137e-04	k: 62	n:250000
Cons ci ratio: 3.142407e-04	ci left: 9.982354e-01	ci right 9.985529e-01	k: 249600	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
CCDC15   250000 perm   81 sec   (3081 perm/sec)   p_kst 4.000000e-06   p_cons 9.984000e-01   p_joint 2.480000e-04

Joint ci ratio: 4.684656e-01	ci left: 2.064908e-04	ci right 3.358494e-04	k: 69	n:260000
Cons ci ratio: 3.099685e-04	ci left: 9.982186e-01	ci right 9.985317e-01	k: 259579	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
CCDC15   260000 perm   85 sec   (3056 perm/sec)   p_kst 3.846154e-06   p_cons 9.983808e-01   p_joint 2.653846e-04

Joint ci ratio: 4.525789e-01	ci left: 2.152130e-04	ci right 3.440629e-04	k: 74	n:270000
Cons ci ratio: 3.040940e-04	ci left: 9.982225e-01	ci right 9.985296e-01	k: 269563	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
CCDC15   270000 perm   89 sec   (3033 perm/sec)   p_kst 3.703704e-06   p_cons 9.983815e-01   p_joint 2.740741e-04

Joint ci ratio: 4.328274e-01	ci left: 2.297410e-04	ci right 3.595431e-04	k: 81	n:280000
Cons ci ratio: 2.995277e-04	ci left: 9.982150e-01	ci right 9.985174e-01	k: 279544	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
CCDC15   280000 perm   93 sec   (3008 perm/sec)   p_kst 3.571429e-06   p_cons 9.983714e-01   p_joint 2.892857e-04

Joint ci ratio: 4.226411e-01	ci left: 2.341271e-04	ci right 3.624144e-04	k: 85	n:290000
Cons ci ratio: 2.970086e-04	ci left: 9.981865e-01	ci right 9.984862e-01	k: 289519	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
CCDC15   290000 perm   97 sec   (2980 perm/sec)   p_kst 3.448276e-06   p_cons 9.983414e-01   p_joint 2.931034e-04

Joint ci ratio: 4.202065e-01	ci left: 2.293025e-04	ci right 3.540191e-04	k: 86	n:300000
Cons ci ratio: 2.894771e-04	ci left: 9.982191e-01	ci right 9.985112e-01	k: 299511	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
CCDC15   300000 perm   102 sec   (2953 perm/sec)   p_kst 3.333333e-06   p_cons 9.983700e-01   p_joint 2.866667e-04

Joint ci ratio: 4.154588e-01	ci left: 2.276788e-04	ci right 3.497255e-04	k: 88	n:310000
Cons ci ratio: 2.843941e-04	ci left: 9.982260e-01	ci right 9.985130e-01	k: 309496	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
CCDC15   310000 perm   106 sec   (2921 perm/sec)   p_kst 3.225806e-06   p_cons 9.983742e-01   p_joint 2.838710e-04

Joint ci ratio: 4.086289e-01	ci left: 2.289670e-04	ci right 3.491382e-04	k: 91	n:320000
Cons ci ratio: 2.790290e-04	ci left: 9.982390e-01	ci right 9.985206e-01	k: 319483	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
CCDC15   320000 perm   111 sec   (2875 perm/sec)   p_kst 3.125000e-06   p_cons 9.983844e-01   p_joint 2.843750e-04

Joint ci ratio: 4.064272e-01	ci left: 2.247481e-04	ci right 3.418978e-04	k: 92	n:330000
Cons ci ratio: 2.760058e-04	ci left: 9.982261e-01	ci right 9.985045e-01	k: 329462	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
CCDC15   330000 perm   116 sec   (2848 perm/sec)   p_kst 3.030303e-06   p_cons 9.983697e-01   p_joint 2.787879e-04

Joint ci ratio: 3.979583e-01	ci left: 2.287126e-04	ci right 3.447905e-04	k: 96	n:340000
Cons ci ratio: 2.710980e-04	ci left: 9.982384e-01	ci right 9.985118e-01	k: 339449	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
CCDC15   340000 perm   120 sec   (2823 perm/sec)   p_kst 2.941176e-06   p_cons 9.983794e-01   p_joint 2.823529e-04

Joint ci ratio: 3.919434e-01	ci left: 2.298981e-04	ci right 3.443578e-04	k: 99	n:350000
Cons ci ratio: 2.676124e-04	ci left: 9.982352e-01	ci right 9.985050e-01	k: 349431	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
CCDC15   350000 perm   125 sec   (2798 perm/sec)   p_kst 2.857143e-06   p_cons 9.983743e-01   p_joint 2.828571e-04

Joint ci ratio: 3.861933e-01	ci left: 2.310302e-04	ci right 3.439369e-04	k: 102	n:360000
Cons ci ratio: 2.640304e-04	ci left: 9.982350e-01	ci right 9.985013e-01	k: 359414	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
CCDC15   360000 perm   130 sec   (2774 perm/sec)   p_kst 2.777778e-06   p_cons 9.983722e-01   p_joint 2.833333e-04

Joint ci ratio: 3.771466e-01	ci left: 2.370034e-04	ci right 3.494450e-04	k: 107	n:370000
Cons ci ratio: 2.601556e-04	ci left: 9.982406e-01	ci right 9.985029e-01	k: 369399	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
CCDC15   370000 perm   135 sec   (2749 perm/sec)   p_kst 2.702703e-06   p_cons 9.983757e-01   p_joint 2.891892e-04

Joint ci ratio: 3.754136e-01	ci left: 2.331491e-04	ci right 3.431286e-04	k: 108	n:380000
Cons ci ratio: 2.583121e-04	ci left: 9.982212e-01	ci right 9.984816e-01	k: 379375	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
CCDC15   380000 perm   139 sec   (2726 perm/sec)   p_kst 2.631579e-06   p_cons 9.983553e-01   p_joint 2.842105e-04

Joint ci ratio: 3.806918e-01	ci left: 2.202092e-04	ci right 3.259110e-04	k: 105	n:390000
Cons ci ratio: 2.542876e-04	ci left: 9.982322e-01	ci right 9.984885e-01	k: 389362	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
CCDC15   390000 perm   144 sec   (2701 perm/sec)   p_kst 2.564103e-06   p_cons 9.983641e-01   p_joint 2.692308e-04

Joint ci ratio: 3.703529e-01	ci left: 2.282887e-04	ci right 3.341721e-04	k: 111	n:400000
Cons ci ratio: 2.504387e-04	ci left: 9.982426e-01	ci right 9.984950e-01	k: 399349	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
CCDC15   400000 perm   149 sec   (2678 perm/sec)   p_kst 2.500000e-06   p_cons 9.983725e-01   p_joint 2.775000e-04

Joint ci ratio: 3.687113e-01	ci left: 2.249331e-04	ci right 3.286862e-04	k: 112	n:410000
Cons ci ratio: 2.473101e-04	ci left: 9.982450e-01	ci right 9.984942e-01	k: 409333	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
CCDC15   410000 perm   154 sec   (2655 perm/sec)   p_kst 2.439024e-06   p_cons 9.983732e-01   p_joint 2.731707e-04

Joint ci ratio: 3.592945e-01	ci left: 2.325571e-04	ci right 3.364467e-04	k: 118	n:420000
Cons ci ratio: 2.444747e-04	ci left: 9.982448e-01	ci right 9.984911e-01	k: 419316	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
CCDC15   420000 perm   160 sec   (2632 perm/sec)   p_kst 2.380952e-06   p_cons 9.983714e-01   p_joint 2.809524e-04

Joint ci ratio: 3.519752e-01	ci left: 2.377381e-04	ci right 3.412846e-04	k: 123	n:430000
Cons ci ratio: 2.424232e-04	ci left: 9.982350e-01	ci right 9.984792e-01	k: 429295	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
CCDC15   430000 perm   165 sec   (2609 perm/sec)   p_kst 2.325581e-06   p_cons 9.983605e-01   p_joint 2.860465e-04

Joint ci ratio: 3.437556e-01	ci left: 2.447803e-04	ci right 3.483508e-04	k: 129	n:440000
Cons ci ratio: 2.390840e-04	ci left: 9.982444e-01	ci right 9.984853e-01	k: 439282	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
CCDC15   440000 perm   170 sec   (2586 perm/sec)   p_kst 2.272727e-06   p_cons 9.983682e-01   p_joint 2.931818e-04

Joint ci ratio: 3.608175e-01	ci left: 2.150317e-04	ci right 3.115951e-04	k: 117	n:450000
Cons ci ratio: 2.366796e-04	ci left: 9.982420e-01	ci right 9.984804e-01	k: 449264	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
CCDC15   450000 perm   176 sec   (2562 perm/sec)   p_kst 2.222222e-06   p_cons 9.983644e-01   p_joint 2.600000e-04

Joint ci ratio: 3.577983e-01	ci left: 2.143124e-04	ci right 3.095600e-04	k: 119	n:460000
Cons ci ratio: 2.348111e-04	ci left: 9.982329e-01	ci right 9.984694e-01	k: 459243	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
CCDC15   460000 perm   181 sec   (2541 perm/sec)   p_kst 2.173913e-06   p_cons 9.983543e-01   p_joint 2.586957e-04

Joint ci ratio: 3.737132e-01	ci left: 1.904300e-04	ci right 2.797517e-04	k: 109	n:470000
Cons ci ratio: 2.325282e-04	ci left: 9.982309e-01	ci right 9.984650e-01	k: 469225	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
CCDC15   470000 perm   186 sec   (2521 perm/sec)   p_kst 2.127660e-06   p_cons 9.983511e-01   p_joint 2.319149e-04

Joint ci ratio: 3.687188e-01	ci left: 1.921297e-04	ci right 2.807540e-04	k: 112	n:480000
Cons ci ratio: 2.308901e-04	ci left: 9.982203e-01	ci right 9.984528e-01	k: 479203	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
CCDC15   480000 perm   192 sec   (2498 perm/sec)   p_kst 2.083333e-06   p_cons 9.983396e-01   p_joint 2.333333e-04

Joint ci ratio: 3.670986e-01	ci left: 1.900608e-04	ci right 2.772531e-04	k: 113	n:490000
Cons ci ratio: 2.288554e-04	ci left: 9.982165e-01	ci right 9.984469e-01	k: 489184	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
CCDC15   490000 perm   198 sec   (2470 perm/sec)   p_kst 2.040816e-06   p_cons 9.983347e-01   p_joint 2.306122e-04

Joint ci ratio: 3.670994e-01	ci left: 1.862595e-04	ci right 2.717081e-04	k: 113	n:500000
Cons ci ratio: 2.263274e-04	ci left: 9.982212e-01	ci right 9.984490e-01	k: 499169	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
CCDC15   500000 perm   204 sec   (2449 perm/sec)   p_kst 2.000000e-06   p_cons 9.983380e-01   p_joint 2.260000e-04

Joint ci ratio: 3.639211e-01	ci left: 1.861688e-04	ci right 2.706607e-04	k: 115	n:510000
Cons ci ratio: 2.248053e-04	ci left: 9.982114e-01	ci right 9.984377e-01	k: 509147	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
CCDC15   510000 perm   210 sec   (2429 perm/sec)   p_kst 1.960784e-06   p_cons 9.983275e-01   p_joint 2.254902e-04

Joint ci ratio: 3.578038e-01	ci left: 1.895836e-04	ci right 2.738424e-04	k: 119	n:520000
Cons ci ratio: 2.230497e-04	ci left: 9.982061e-01	ci right 9.984306e-01	k: 519127	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
CCDC15   520000 perm   216 sec   (2410 perm/sec)   p_kst 1.923077e-06   p_cons 9.983212e-01   p_joint 2.288462e-04

Joint ci ratio: 2.821161e-01	ci left: 3.128398e-04	ci right 4.172774e-04	k: 192	n:530000
Cons ci ratio: 2.377170e-04	ci left: 9.979343e-01	ci right 9.981734e-01	k: 528970	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
CCDC15   530000 perm   222 sec   (2387 perm/sec)   p_kst 1.886792e-06   p_cons 9.980566e-01   p_joint 3.622642e-04

Joint ci ratio: 2.962759e-01	ci left: 2.761285e-04	ci right 3.738083e-04	k: 174	n:540000
Cons ci ratio: 2.347798e-04	ci left: 9.979478e-01	ci right 9.981839e-01	k: 538957	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
CCDC15   540000 perm   228 sec   (2364 perm/sec)   p_kst 1.851852e-06   p_cons 9.980685e-01   p_joint 3.222222e-04

Joint ci ratio: 2.929466e-01	ci left: 2.778433e-04	ci right 3.748203e-04	k: 178	n:550000
Cons ci ratio: 2.320504e-04	ci left: 9.979589e-01	ci right 9.981922e-01	k: 548943	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
CCDC15   550000 perm   234 sec   (2346 perm/sec)   p_kst 1.818182e-06   p_cons 9.980782e-01   p_joint 3.236364e-04

Joint ci ratio: 2.913240e-01	ci left: 2.761915e-04	ci right 3.719596e-04	k: 180	n:560000
Cons ci ratio: 2.297299e-04	ci left: 9.979640e-01	ci right 9.981950e-01	k: 558926	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
CCDC15   560000 perm   241 sec   (2328 perm/sec)   p_kst 1.785714e-06   p_cons 9.980821e-01   p_joint 3.214286e-04

Joint ci ratio: 2.905231e-01	ci left: 2.729724e-04	ci right 3.673161e-04	k: 181	n:570000
Cons ci ratio: 2.270590e-04	ci left: 9.979763e-01	ci right 9.982046e-01	k: 568913	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
CCDC15   570000 perm   247 sec   (2305 perm/sec)   p_kst 1.754386e-06   p_cons 9.980930e-01   p_joint 3.175439e-04

Joint ci ratio: 2.979874e-01	ci left: 2.538934e-04	ci right 3.443245e-04	k: 172	n:580000
Cons ci ratio: 2.249822e-04	ci left: 9.979792e-01	ci right 9.982054e-01	k: 578895	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
CCDC15   580000 perm   254 sec   (2286 perm/sec)   p_kst 1.724138e-06   p_cons 9.980948e-01   p_joint 2.965517e-04

Joint ci ratio: 2.937718e-01	ci left: 2.574359e-04	ci right 3.475902e-04	k: 177	n:590000
Cons ci ratio: 2.236558e-04	ci left: 9.979699e-01	ci right 9.981947e-01	k: 588870	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
CCDC15   590000 perm   261 sec   (2264 perm/sec)   p_kst 1.694915e-06   p_cons 9.980847e-01   p_joint 3.000000e-04

Joint ci ratio: 2.997269e-01	ci left: 2.423466e-04	ci right 3.292649e-04	k: 170	n:600000
Cons ci ratio: 2.221539e-04	ci left: 9.979642e-01	ci right 9.981876e-01	k: 598847	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
CCDC15   600000 perm   267 sec   (2245 perm/sec)   p_kst 1.666667e-06   p_cons 9.980783e-01   p_joint 2.833333e-04

Joint ci ratio: 3.491850e-01	ci left: 1.705748e-04	ci right 2.441458e-04	k: 125	n:610000
Cons ci ratio: 2.207735e-04	ci left: 9.979571e-01	ci right 9.981791e-01	k: 608823	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
CCDC15   610000 perm   274 sec   (2228 perm/sec)   p_kst 1.639344e-06   p_cons 9.980705e-01   p_joint 2.049180e-04

Joint ci ratio: 3.437704e-01	ci left: 1.737139e-04	ci right 2.472187e-04	k: 129	n:620000
Cons ci ratio: 2.190489e-04	ci left: 9.979569e-01	ci right 9.981771e-01	k: 618803	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
CCDC15   620000 perm   281 sec   (2207 perm/sec)   p_kst 1.612903e-06   p_cons 9.980694e-01   p_joint 2.080645e-04

Joint ci ratio: 3.437710e-01	ci left: 1.709565e-04	ci right 2.432947e-04	k: 129	n:630000
Cons ci ratio: 2.173640e-04	ci left: 9.979567e-01	ci right 9.981752e-01	k: 628783	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
CCDC15   630000 perm   288 sec   (2189 perm/sec)   p_kst 1.587302e-06   p_cons 9.980683e-01   p_joint 2.047619e-04

Joint ci ratio: 3.478090e-01	ci left: 1.640047e-04	ci right 2.344004e-04	k: 126	n:640000
Cons ci ratio: 2.154554e-04	ci left: 9.979613e-01	ci right 9.981779e-01	k: 638766	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
CCDC15   640000 perm   295 sec   (2173 perm/sec)   p_kst 1.562500e-06   p_cons 9.980719e-01   p_joint 1.968750e-04

Joint ci ratio: 3.464479e-01	ci left: 1.628859e-04	ci right 2.324663e-04	k: 127	n:650000
Cons ci ratio: 2.142780e-04	ci left: 9.979532e-01	ci right 9.981685e-01	k: 648741	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
CCDC15   650000 perm   301 sec   (2157 perm/sec)   p_kst 1.538462e-06   p_cons 9.980631e-01   p_joint 1.953846e-04

Joint ci ratio: 3.534213e-01	ci left: 1.535078e-04	ci right 2.207054e-04	k: 122	n:660000
Cons ci ratio: 2.127830e-04	ci left: 9.979515e-01	ci right 9.981653e-01	k: 658720	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
CCDC15   660000 perm   308 sec   (2142 perm/sec)   p_kst 1.515152e-06   p_cons 9.980606e-01   p_joint 1.848485e-04

Joint ci ratio: 3.519936e-01	ci left: 1.525769e-04	ci right 2.190355e-04	k: 123	n:670000
Cons ci ratio: 2.113185e-04	ci left: 9.979499e-01	ci right 9.981622e-01	k: 668699	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
CCDC15   670000 perm   315 sec   (2127 perm/sec)   p_kst 1.492537e-06   p_cons 9.980582e-01   p_joint 1.835821e-04

Joint ci ratio: 4.042889e-01	ci left: 1.103881e-04	ci right 1.675434e-04	k: 93	n:680000
Cons ci ratio: 2.103599e-04	ci left: 9.979392e-01	ci right 9.981506e-01	k: 678672	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
CCDC15   680000 perm   322 sec   (2112 perm/sec)   p_kst 1.470588e-06   p_cons 9.980471e-01   p_joint 1.367647e-04

Joint ci ratio: 4.109003e-01	ci left: 1.048862e-04	ci right 1.603241e-04	k: 90	n:690000
Cons ci ratio: 2.090204e-04	ci left: 9.979364e-01	ci right 9.981464e-01	k: 688650	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
CCDC15   690000 perm   329 sec   (2096 perm/sec)   p_kst 1.449275e-06   p_cons 9.980435e-01   p_joint 1.304348e-04

Joint ci ratio: 4.276811e-01	ci left: 9.444255e-05	ci right 1.469850e-04	k: 83	n:700000
Cons ci ratio: 2.073263e-04	ci left: 9.979409e-01	ci right 9.981492e-01	k: 698633	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
CCDC15   700000 perm   336 sec   (2081 perm/sec)   p_kst 1.428571e-06   p_cons 9.980471e-01   p_joint 1.185714e-04

Joint ci ratio: 4.276815e-01	ci left: 9.311236e-05	ci right 1.449149e-04	k: 83	n:710000
Cons ci ratio: 2.067109e-04	ci left: 9.979251e-01	ci right 9.981328e-01	k: 708602	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
CCDC15   710000 perm   344 sec   (2064 perm/sec)   p_kst 1.408451e-06   p_cons 9.980310e-01   p_joint 1.169014e-04

Joint ci ratio: 4.276818e-01	ci left: 9.181912e-05	ci right 1.429022e-04	k: 83	n:720000
Cons ci ratio: 2.048565e-04	ci left: 9.979340e-01	ci right 9.981398e-01	k: 718588	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
CCDC15   720000 perm   352 sec   (2047 perm/sec)   p_kst 1.388889e-06   p_cons 9.980389e-01   p_joint 1.152778e-04

Joint ci ratio: 4.251587e-01	ci left: 9.178414e-05	ci right 1.424607e-04	k: 84	n:730000
Cons ci ratio: 2.029053e-04	ci left: 9.979454e-01	ci right 9.981492e-01	k: 728576	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
CCDC15   730000 perm   359 sec   (2032 perm/sec)   p_kst 1.369863e-06   p_cons 9.980493e-01   p_joint 1.150685e-04

Joint ci ratio: 4.251590e-01	ci left: 9.054380e-05	ci right 1.405356e-04	k: 84	n:740000
Cons ci ratio: 2.013534e-04	ci left: 9.979496e-01	ci right 9.981519e-01	k: 738559	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
CCDC15   740000 perm   367 sec   (2014 perm/sec)   p_kst 1.351351e-06   p_cons 9.980527e-01   p_joint 1.135135e-04

Joint ci ratio: 4.226800e-01	ci left: 9.052761e-05	ci right 1.401365e-04	k: 85	n:750000
Cons ci ratio: 1.999732e-04	ci left: 9.979510e-01	ci right 9.981518e-01	k: 748540	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
CCDC15   750000 perm   375 sec   (1999 perm/sec)   p_kst 1.333333e-06   p_cons 9.980533e-01   p_joint 1.133333e-04

Joint ci ratio: 4.382460e-01	ci left: 8.229695e-05	ci right 1.295478e-04	k: 79	n:760000
Cons ci ratio: 1.982846e-04	ci left: 9.979590e-01	ci right 9.981582e-01	k: 758526	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
CCDC15   760000 perm   383 sec   (1985 perm/sec)   p_kst 1.315789e-06   p_cons 9.980605e-01   p_joint 1.039474e-04

Joint ci ratio: 4.328683e-01	ci left: 8.354071e-05	ci right 1.307459e-04	k: 81	n:770000
Cons ci ratio: 1.968998e-04	ci left: 9.979616e-01	ci right 9.981593e-01	k: 768508	n:770000
KS ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
CCDC15   770000 perm   391 sec   (1970 perm/sec)   p_kst 1.298701e-06   p_cons 9.980623e-01   p_joint 1.051948e-04

Joint ci ratio: 4.302527e-01	ci left: 8.361243e-05	ci right 1.304902e-04	k: 82	n:780000
Cons ci ratio: 1.956731e-04	ci left: 9.979614e-01	ci right 9.981579e-01	k: 778488	n:780000
KS ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
CCDC15   780000 perm   399 sec   (1956 perm/sec)   p_kst 1.282051e-06   p_cons 9.980615e-01   p_joint 1.051282e-04

Joint ci ratio: 4.302530e-01	ci left: 8.255403e-05	ci right 1.288384e-04	k: 82	n:790000
Cons ci ratio: 1.939600e-04	ci left: 9.979716e-01	ci right 9.981664e-01	k: 788476	n:790000
KS ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
CCDC15   790000 perm   407 sec   (1941 perm/sec)   p_kst 1.265823e-06   p_cons 9.980709e-01   p_joint 1.037975e-04

Joint ci ratio: 4.276843e-01	ci left: 8.263712e-05	ci right 1.286121e-04	k: 83	n:800000
Cons ci ratio: 1.927874e-04	ci left: 9.979714e-01	ci right 9.981650e-01	k: 798456	n:800000
KS ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
CCDC15   800000 perm   415 sec   (1927 perm/sec)   p_kst 1.250000e-06   p_cons 9.980700e-01   p_joint 1.037500e-04

Joint ci ratio: 4.251611e-01	ci left: 8.271895e-05	ci right 1.283907e-04	k: 84	n:810000
Cons ci ratio: 1.916972e-04	ci left: 9.979698e-01	ci right 9.981624e-01	k: 808435	n:810000
KS ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
CCDC15   810000 perm   423 sec   (1914 perm/sec)   p_kst 1.234568e-06   p_cons 9.980679e-01   p_joint 1.037037e-04

Joint ci ratio: 4.251614e-01	ci left: 8.171017e-05	ci right 1.268249e-04	k: 84	n:820000
Cons ci ratio: 1.905047e-04	ci left: 9.979709e-01	ci right 9.981622e-01	k: 818416	n:820000
KS ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
CCDC15   820000 perm   431 sec   (1901 perm/sec)   p_kst 1.219512e-06   p_cons 9.980683e-01   p_joint 1.024390e-04

Joint ci ratio: 4.251617e-01	ci left: 8.072571e-05	ci right 1.252969e-04	k: 84	n:830000
Cons ci ratio: 1.893341e-04	ci left: 9.979719e-01	ci right 9.981620e-01	k: 828397	n:830000
KS ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
CCDC15   830000 perm   440 sec   (1888 perm/sec)   p_kst 1.204819e-06   p_cons 9.980687e-01   p_joint 1.012048e-04

Joint ci ratio: 4.226826e-01	ci left: 8.082813e-05	ci right 1.251221e-04	k: 85	n:840000
Cons ci ratio: 1.881849e-04	ci left: 9.979728e-01	ci right 9.981618e-01	k: 838378	n:840000
KS ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
CCDC15   840000 perm   448 sec   (1874 perm/sec)   p_kst 1.190476e-06   p_cons 9.980690e-01   p_joint 1.011905e-04

Joint ci ratio: 4.355345e-01	ci left: 7.463012e-05	ci right 1.171362e-04	k: 80	n:850000
Cons ci ratio: 1.869992e-04	ci left: 9.979750e-01	ci right 9.981628e-01	k: 848360	n:850000
KS ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
CCDC15   850000 perm   457 sec   (1861 perm/sec)   p_kst 1.176471e-06   p_cons 9.980706e-01   p_joint 9.411765e-05

Joint ci ratio: 4.276859e-01	ci left: 7.687168e-05	ci right 1.196393e-04	k: 83	n:860000
Cons ci ratio: 1.860599e-04	ci left: 9.979723e-01	ci right 9.981592e-01	k: 858338	n:860000
KS ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
CCDC15   860000 perm   465 sec   (1848 perm/sec)   p_kst 1.162791e-06   p_cons 9.980674e-01   p_joint 9.651163e-05

Joint ci ratio: 4.226833e-01	ci left: 7.804093e-05	ci right 1.208076e-04	k: 85	n:870000
Cons ci ratio: 1.847484e-04	ci left: 9.979780e-01	ci right 9.981635e-01	k: 868323	n:870000
KS ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
CCDC15   870000 perm   474 sec   (1836 perm/sec)   p_kst 1.149425e-06   p_cons 9.980724e-01   p_joint 9.770115e-05

Joint ci ratio: 4.226836e-01	ci left: 7.715409e-05	ci right 1.194348e-04	k: 85	n:880000
Cons ci ratio: 1.838428e-04	ci left: 9.979754e-01	ci right 9.981600e-01	k: 878301	n:880000
KS ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
CCDC15   880000 perm   483 sec   (1823 perm/sec)   p_kst 1.136364e-06   p_cons 9.980693e-01   p_joint 9.659091e-05

Joint ci ratio: 4.178525e-01	ci left: 7.829671e-05	ci right 1.205764e-04	k: 87	n:890000
Cons ci ratio: 1.827901e-04	ci left: 9.979763e-01	ci right 9.981598e-01	k: 888282	n:890000
KS ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
CCDC15   890000 perm   491 sec   (1811 perm/sec)   p_kst 1.123596e-06   p_cons 9.980697e-01   p_joint 9.775281e-05

Joint ci ratio: 4.131834e-01	ci left: 7.941663e-05	ci right 1.216899e-04	k: 89	n:900000
Cons ci ratio: 1.814406e-04	ci left: 9.979840e-01	ci right 9.981661e-01	k: 898269	n:900000
KS ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
CCDC15   900000 perm   500 sec   (1800 perm/sec)   p_kst 1.111111e-06   p_cons 9.980767e-01   p_joint 9.888889e-05

Joint ci ratio: 3.138241e-01	ci left: 1.445723e-04	ci right 1.993520e-04	k: 155	n:910000
Cons ci ratio: 1.805316e-04	ci left: 9.979825e-01	ci right 9.981638e-01	k: 908248	n:910000
KS ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
CCDC15   910000 perm   509 sec   (1788 perm/sec)   p_kst 1.098901e-06   p_cons 9.980747e-01   p_joint 1.703297e-04

Joint ci ratio: 3.138244e-01	ci left: 1.430008e-04	ci right 1.971851e-04	k: 155	n:920000
Cons ci ratio: 1.799906e-04	ci left: 9.979733e-01	ci right 9.981540e-01	k: 918220	n:920000
KS ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
CCDC15   920000 perm   518 sec   (1776 perm/sec)   p_kst 1.086957e-06   p_cons 9.980652e-01   p_joint 1.684783e-04

Joint ci ratio: 3.108495e-01	ci left: 1.444362e-04	ci right 1.985426e-04	k: 158	n:930000
Cons ci ratio: 1.789526e-04	ci left: 9.979753e-01	ci right 9.981549e-01	k: 928202	n:930000
KS ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
CCDC15   930000 perm   527 sec   (1765 perm/sec)   p_kst 1.075269e-06   p_cons 9.980667e-01   p_joint 1.698925e-04

Joint ci ratio: 3.919789e-01	ci left: 8.559901e-05	ci right 1.282208e-04	k: 99	n:940000
Cons ci ratio: 1.430367e-04	ci left: 9.986776e-01	ci right 9.988215e-01	k: 938826	n:940000
KS ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
CCDC15   940000 perm   536 sec   (1754 perm/sec)   p_kst 1.063830e-06   p_cons 9.987511e-01   p_joint 1.053191e-04

Joint ci ratio: 3.881168e-01	ci left: 8.659676e-05	ci right 1.291818e-04	k: 101	n:950000
Cons ci ratio: 1.423119e-04	ci left: 9.986774e-01	ci right 9.988206e-01	k: 948813	n:950000
KS ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
CCDC15   950000 perm   545 sec   (1743 perm/sec)   p_kst 1.052632e-06   p_cons 9.987505e-01   p_joint 1.063158e-04

Joint ci ratio: 3.881170e-01	ci left: 8.569471e-05	ci right 1.278362e-04	k: 101	n:960000
Cons ci ratio: 1.414799e-04	ci left: 9.986794e-01	ci right 9.988217e-01	k: 958802	n:960000
KS ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
CCDC15   960000 perm   555 sec   (1731 perm/sec)   p_kst 1.041667e-06   p_cons 9.987521e-01   p_joint 1.052083e-04

Joint ci ratio: 4.086687e-01	ci left: 7.553418e-05	ci right 1.151821e-04	k: 91	n:970000
Cons ci ratio: 1.404873e-04	ci left: 9.986845e-01	ci right 9.988258e-01	k: 968794	n:970000
KS ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
CCDC15   970000 perm   564 sec   (1720 perm/sec)   p_kst 1.030928e-06   p_cons 9.987567e-01   p_joint 9.381443e-05

Joint ci ratio: 4.064656e-01	ci left: 7.567921e-05	ci right 1.151313e-04	k: 92	n:980000
Cons ci ratio: 1.395136e-04	ci left: 9.986896e-01	ci right 9.988299e-01	k: 978786	n:980000
KS ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
CCDC15   980000 perm   573 sec   (1709 perm/sec)   p_kst 1.020408e-06   p_cons 9.987612e-01   p_joint 9.387755e-05

Joint ci ratio: 4.021640e-01	ci left: 7.672952e-05	ci right 1.161929e-04	k: 94	n:990000
Cons ci ratio: 1.384445e-04	ci left: 9.986966e-01	ci right 9.988358e-01	k: 988780	n:990000
KS ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
CCDC15   990000 perm   583 sec   (1698 perm/sec)   p_kst 1.010101e-06   p_cons 9.987677e-01   p_joint 9.494949e-05

Joint ci ratio: 3.979962e-01	ci left: 7.776098e-05	ci right 1.172312e-04	k: 96	n:1000000
Cons ci ratio: 1.377878e-04	ci left: 9.986963e-01	ci right 9.988348e-01	k: 998767	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
CCDC15   1000000 perm   593 sec   (1688 perm/sec)   p_kst 1.000000e-06   p_cons 9.987670e-01   p_joint 9.600000e-05

Joint ci ratio: 3.939553e-01	ci left: 7.877408e-05	ci right 1.182469e-04	k: 98	n:1010000
Cons ci ratio: 1.373054e-04	ci left: 9.986929e-01	ci right 9.988310e-01	k: 1008751	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
CCDC15   1010000 perm   602 sec   (1677 perm/sec)   p_kst 9.900990e-07   p_cons 9.987634e-01   p_joint 9.702970e-05

Joint ci ratio: 3.900351e-01	ci left: 7.976931e-05	ci right 1.192407e-04	k: 100	n:1020000
Cons ci ratio: 1.365018e-04	ci left: 9.986956e-01	ci right 9.988329e-01	k: 1018741	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
CCDC15   1020000 perm   612 sec   (1667 perm/sec)   p_kst 9.803922e-07   p_cons 9.987657e-01   p_joint 9.803922e-05

Joint ci ratio: 3.862296e-01	ci left: 8.074712e-05	ci right 1.202133e-04	k: 102	n:1030000
Cons ci ratio: 1.357118e-04	ci left: 9.986983e-01	ci right 9.988348e-01	k: 1028731	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
CCDC15   1030000 perm   622 sec   (1657 perm/sec)   p_kst 9.708738e-07   p_cons 9.987680e-01   p_joint 9.902913e-05

Joint ci ratio: 3.843682e-01	ci left: 8.083910e-05	ci right 1.201117e-04	k: 103	n:1040000
Cons ci ratio: 1.355667e-04	ci left: 9.986891e-01	ci right 9.988254e-01	k: 1038709	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
CCDC15   1040000 perm   631 sec   (1647 perm/sec)   p_kst 9.615385e-07   p_cons 9.987587e-01   p_joint 9.903846e-05

Joint ci ratio: 3.843684e-01	ci left: 8.006920e-05	ci right 1.189678e-04	k: 103	n:1050000
Cons ci ratio: 1.346903e-04	ci left: 9.986938e-01	ci right 9.988292e-01	k: 1048701	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
CCDC15   1050000 perm   642 sec   (1637 perm/sec)   p_kst 9.523810e-07   p_cons 9.987629e-01   p_joint 9.809524e-05

Joint ci ratio: 3.825337e-01	ci left: 8.016628e-05	ci right 1.188793e-04	k: 104	n:1060000
Cons ci ratio: 1.343405e-04	ci left: 9.986886e-01	ci right 9.988237e-01	k: 1058683	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
CCDC15   1060000 perm   652 sec   (1626 perm/sec)   p_kst 9.433962e-07   p_cons 9.987575e-01   p_joint 9.811321e-05

Joint ci ratio: 3.843688e-01	ci left: 7.857256e-05	ci right 1.167441e-04	k: 103	n:1070000
Cons ci ratio: 1.337901e-04	ci left: 9.986875e-01	ci right 9.988220e-01	k: 1068669	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
CCDC15   1070000 perm   663 sec   (1615 perm/sec)   p_kst 9.345794e-07   p_cons 9.987561e-01   p_joint 9.626168e-05

Joint ci ratio: 3.843689e-01	ci left: 7.784503e-05	ci right 1.156631e-04	k: 103	n:1080000
Cons ci ratio: 1.331966e-04	ci left: 9.986872e-01	ci right 9.988212e-01	k: 1078656	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
CCDC15   1080000 perm   673 sec   (1605 perm/sec)   p_kst 9.259259e-07   p_cons 9.987556e-01   p_joint 9.537037e-05

Joint ci ratio: 3.843691e-01	ci left: 7.713085e-05	ci right 1.146020e-04	k: 103	n:1090000
Cons ci ratio: 1.325131e-04	ci left: 9.986889e-01	ci right 9.988222e-01	k: 1088645	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
CCDC15   1090000 perm   683 sec   (1595 perm/sec)   p_kst 9.174312e-07   p_cons 9.987569e-01   p_joint 9.449541e-05

Joint ci ratio: 3.862308e-01	ci left: 7.560862e-05	ci right 1.125635e-04	k: 102	n:1100000
Cons ci ratio: 1.318881e-04	ci left: 9.986896e-01	ci right 9.988222e-01	k: 1098633	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
CCDC15   1100000 perm   694 sec   (1586 perm/sec)   p_kst 9.090909e-07   p_cons 9.987573e-01   p_joint 9.272727e-05

Joint ci ratio: 3.862310e-01	ci left: 7.492746e-05	ci right 1.115494e-04	k: 102	n:1110000
Cons ci ratio: 1.312243e-04	ci left: 9.986913e-01	ci right 9.988232e-01	k: 1108622	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
CCDC15   1110000 perm   704 sec   (1577 perm/sec)   p_kst 9.009009e-07   p_cons 9.987586e-01   p_joint 9.189189e-05

Joint ci ratio: 3.843696e-01	ci left: 7.506483e-05	ci right 1.115324e-04	k: 103	n:1120000
Cons ci ratio: 1.308051e-04	ci left: 9.986883e-01	ci right 9.988198e-01	k: 1118606	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
CCDC15   1120000 perm   715 sec   (1567 perm/sec)   p_kst 8.928571e-07   p_cons 9.987554e-01   p_joint 9.196429e-05

Joint ci ratio: 3.843698e-01	ci left: 7.440054e-05	ci right 1.105453e-04	k: 103	n:1130000
Cons ci ratio: 1.302503e-04	ci left: 9.986881e-01	ci right 9.988190e-01	k: 1128593	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
CCDC15   1130000 perm   725 sec   (1558 perm/sec)   p_kst 8.849558e-07   p_cons 9.987549e-01   p_joint 9.115044e-05

Joint ci ratio: 3.825350e-01	ci left: 7.454053e-05	ci right 1.105370e-04	k: 104	n:1140000
Cons ci ratio: 1.296567e-04	ci left: 9.986888e-01	ci right 9.988192e-01	k: 1138581	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
CCDC15   1140000 perm   736 sec   (1549 perm/sec)   p_kst 8.771930e-07   p_cons 9.987553e-01   p_joint 9.122807e-05

Joint ci ratio: 3.789429e-01	ci left: 7.546505e-05	ci right 1.114806e-04	k: 106	n:1150000
Cons ci ratio: 1.290261e-04	ci left: 9.986904e-01	ci right 9.988201e-01	k: 1148570	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
CCDC15   1150000 perm   746 sec   (1541 perm/sec)   p_kst 8.695652e-07   p_cons 9.987565e-01   p_joint 9.217391e-05

Joint ci ratio: 3.754501e-01	ci left: 7.637517e-05	ci right 1.124064e-04	k: 108	n:1160000
Cons ci ratio: 1.284490e-04	ci left: 9.986911e-01	ci right 9.988202e-01	k: 1158558	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
CCDC15   1160000 perm   757 sec   (1532 perm/sec)   p_kst 8.620690e-07   p_cons 9.987569e-01   p_joint 9.310345e-05

Joint ci ratio: 3.737396e-01	ci left: 7.649662e-05	ci right 1.123805e-04	k: 109	n:1170000
Cons ci ratio: 1.279235e-04	ci left: 9.986909e-01	ci right 9.988195e-01	k: 1168545	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
CCDC15   1170000 perm   768 sec   (1524 perm/sec)   p_kst 8.547009e-07   p_cons 9.987564e-01   p_joint 9.316239e-05

Joint ci ratio: 3.720523e-01	ci left: 7.661639e-05	ci right 1.123546e-04	k: 110	n:1180000
Cons ci ratio: 1.273610e-04	ci left: 9.986915e-01	ci right 9.988196e-01	k: 1178533	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
CCDC15   1180000 perm   779 sec   (1516 perm/sec)   p_kst 8.474576e-07   p_cons 9.987568e-01   p_joint 9.322034e-05

Joint ci ratio: 3.720524e-01	ci left: 7.597254e-05	ci right 1.114105e-04	k: 110	n:1190000
Cons ci ratio: 1.268487e-04	ci left: 9.986913e-01	ci right 9.988188e-01	k: 1188520	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
CCDC15   1190000 perm   790 sec   (1507 perm/sec)   p_kst 8.403361e-07   p_cons 9.987563e-01   p_joint 9.243697e-05

Joint ci ratio: 3.687451e-01	ci left: 7.685098e-05	ci right 1.123032e-04	k: 112	n:1200000
Cons ci ratio: 1.261731e-04	ci left: 9.986945e-01	ci right 9.988214e-01	k: 1198511	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
CCDC15   1200000 perm   801 sec   (1499 perm/sec)   p_kst 8.333333e-07   p_cons 9.987592e-01   p_joint 9.333333e-05

Joint ci ratio: 3.639453e-01	ci left: 7.846698e-05	ci right 1.140816e-04	k: 115	n:1210000
Cons ci ratio: 1.256751e-04	ci left: 9.986943e-01	ci right 9.988206e-01	k: 1208498	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
CCDC15   1210000 perm   812 sec   (1491 perm/sec)   p_kst 8.264463e-07   p_cons 9.987587e-01   p_joint 9.504132e-05

Joint ci ratio: 3.623866e-01	ci left: 7.856869e-05	ci right 1.140407e-04	k: 116	n:1220000
Cons ci ratio: 1.251829e-04	ci left: 9.986941e-01	ci right 9.988199e-01	k: 1218485	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
CCDC15   1220000 perm   823 sec   (1483 perm/sec)   p_kst 8.196721e-07   p_cons 9.987582e-01   p_joint 9.508197e-05

Joint ci ratio: 3.593283e-01	ci left: 7.940853e-05	ci right 1.148863e-04	k: 118	n:1230000
Cons ci ratio: 1.246556e-04	ci left: 9.986947e-01	ci right 9.988200e-01	k: 1228473	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
CCDC15   1230000 perm   835 sec   (1474 perm/sec)   p_kst 8.130081e-07   p_cons 9.987585e-01   p_joint 9.593496e-05

Joint ci ratio: 3.593284e-01	ci left: 7.876813e-05	ci right 1.139598e-04	k: 118	n:1240000
Cons ci ratio: 1.245377e-04	ci left: 9.986871e-01	ci right 9.988122e-01	k: 1238451	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
CCDC15   1240000 perm   846 sec   (1466 perm/sec)   p_kst 8.064516e-07   p_cons 9.987508e-01   p_joint 9.516129e-05

Joint ci ratio: 3.534370e-01	ci left: 8.105154e-05	ci right 1.165334e-04	k: 122	n:1250000
Cons ci ratio: 1.240982e-04	ci left: 9.986861e-01	ci right 9.988108e-01	k: 1248437	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
CCDC15   1250000 perm   857 sec   (1458 perm/sec)   p_kst 8.000000e-07   p_cons 9.987496e-01   p_joint 9.760000e-05

Joint ci ratio: 3.492038e-01	ci left: 8.257915e-05	ci right 1.181988e-04	k: 125	n:1260000
Cons ci ratio: 1.239375e-04	ci left: 9.986794e-01	ci right 9.988040e-01	k: 1258416	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
CCDC15   1260000 perm   869 sec   (1451 perm/sec)   p_kst 7.936508e-07   p_cons 9.987429e-01   p_joint 9.920635e-05

Joint ci ratio: 3.478262e-01	ci left: 8.264740e-05	ci right 1.181241e-04	k: 126	n:1270000
Cons ci ratio: 1.233100e-04	ci left: 9.986826e-01	ci right 9.988065e-01	k: 1268407	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
CCDC15   1270000 perm   880 sec   (1443 perm/sec)   p_kst 7.874016e-07   p_cons 9.987457e-01   p_joint 9.921260e-05

Joint ci ratio: 3.451192e-01	ci left: 8.342826e-05	ci right 1.188992e-04	k: 128	n:1280000
Cons ci ratio: 1.227680e-04	ci left: 9.986841e-01	ci right 9.988074e-01	k: 1278396	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
CCDC15   1280000 perm   892 sec   (1436 perm/sec)   p_kst 7.812500e-07   p_cons 9.987469e-01   p_joint 1.000000e-04

Joint ci ratio: 3.437893e-01	ci left: 8.348967e-05	ci right 1.188195e-04	k: 129	n:1290000
Cons ci ratio: 1.221951e-04	ci left: 9.986863e-01	ci right 9.988091e-01	k: 1288386	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
CCDC15   1290000 perm   903 sec   (1428 perm/sec)   p_kst 7.751938e-07   p_cons 9.987488e-01   p_joint 1.000000e-04

Joint ci ratio: 3.437894e-01	ci left: 8.284744e-05	ci right 1.179055e-04	k: 129	n:1300000
Cons ci ratio: 1.218171e-04	ci left: 9.986846e-01	ci right 9.988070e-01	k: 1298371	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
CCDC15   1300000 perm   915 sec   (1421 perm/sec)   p_kst 7.692308e-07   p_cons 9.987469e-01   p_joint 9.923077e-05

Joint ci ratio: 3.424747e-01	ci left: 8.291260e-05	ci right 1.178344e-04	k: 130	n:1310000
Cons ci ratio: 1.214422e-04	ci left: 9.986829e-01	ci right 9.988049e-01	k: 1308356	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
CCDC15   1310000 perm   926 sec   (1414 perm/sec)   p_kst 7.633588e-07   p_cons 9.987450e-01   p_joint 9.923664e-05

Joint ci ratio: 3.520097e-01	ci left: 7.744378e-05	ci right 1.111781e-04	k: 123	n:1320000
Cons ci ratio: 1.209610e-04	ci left: 9.986836e-01	ci right 9.988051e-01	k: 1318344	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
CCDC15   1320000 perm   938 sec   (1407 perm/sec)   p_kst 7.575758e-07   p_cons 9.987455e-01   p_joint 9.318182e-05

Joint ci ratio: 3.505989e-01	ci left: 7.754703e-05	ci right 1.111601e-04	k: 124	n:1330000
Cons ci ratio: 1.204131e-04	ci left: 9.986858e-01	ci right 9.988068e-01	k: 1328334	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
CCDC15   1330000 perm   950 sec   (1400 perm/sec)   p_kst 7.518797e-07   p_cons 9.987474e-01   p_joint 9.323308e-05

Joint ci ratio: 3.478271e-01	ci left: 7.832996e-05	ci right 1.119535e-04	k: 126	n:1340000
Cons ci ratio: 1.201940e-04	ci left: 9.986811e-01	ci right 9.988018e-01	k: 1338315	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
CCDC15   1340000 perm   962 sec   (1393 perm/sec)   p_kst 7.462687e-07   p_cons 9.987425e-01   p_joint 9.402985e-05

Joint ci ratio: 3.451201e-01	ci left: 7.910232e-05	ci right 1.127341e-04	k: 128	n:1350000
Cons ci ratio: 1.198685e-04	ci left: 9.986787e-01	ci right 9.987991e-01	k: 1348299	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
CCDC15   1350000 perm   974 sec   (1387 perm/sec)   p_kst 7.407407e-07   p_cons 9.987400e-01   p_joint 9.481481e-05

Joint ci ratio: 3.437902e-01	ci left: 7.919238e-05	ci right 1.127038e-04	k: 129	n:1360000
Cons ci ratio: 1.194407e-04	ci left: 9.986786e-01	ci right 9.987986e-01	k: 1358286	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
CCDC15   1360000 perm   986 sec   (1380 perm/sec)   p_kst 7.352941e-07   p_cons 9.987397e-01   p_joint 9.485294e-05

Joint ci ratio: 3.424755e-01	ci left: 7.928136e-05	ci right 1.126738e-04	k: 130	n:1370000
Cons ci ratio: 1.188449e-04	ci left: 9.986823e-01	ci right 9.988017e-01	k: 1368278	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
CCDC15   1370000 perm   998 sec   (1373 perm/sec)   p_kst 7.299270e-07   p_cons 9.987431e-01   p_joint 9.489051e-05

Joint ci ratio: 3.411758e-01	ci left: 7.936930e-05	ci right 1.126439e-04	k: 131	n:1380000
Cons ci ratio: 1.182571e-04	ci left: 9.986859e-01	ci right 9.988047e-01	k: 1378270	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
CCDC15   1380000 perm   1010 sec   (1366 perm/sec)   p_kst 7.246377e-07   p_cons 9.987464e-01   p_joint 9.492754e-05

Joint ci ratio: 3.411759e-01	ci left: 7.879829e-05	ci right 1.118335e-04	k: 131	n:1390000
Cons ci ratio: 1.178802e-04	ci left: 9.986851e-01	ci right 9.988035e-01	k: 1388256	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
CCDC15   1390000 perm   1022 sec   (1360 perm/sec)   p_kst 7.194245e-07   p_cons 9.987453e-01   p_joint 9.424460e-05

Joint ci ratio: 3.424758e-01	ci left: 7.758246e-05	ci right 1.102594e-04	k: 130	n:1400000
Cons ci ratio: 1.175068e-04	ci left: 9.986842e-01	ci right 9.988023e-01	k: 1398242	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
CCDC15   1400000 perm   1034 sec   (1353 perm/sec)   p_kst 7.142857e-07   p_cons 9.987443e-01   p_joint 9.285714e-05

Joint ci ratio: 3.411761e-01	ci left: 7.768058e-05	ci right 1.102472e-04	k: 131	n:1410000
Cons ci ratio: 1.171369e-04	ci left: 9.986834e-01	ci right 9.988011e-01	k: 1408228	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
CCDC15   1410000 perm   1047 sec   (1347 perm/sec)   p_kst 7.092199e-07   p_cons 9.987433e-01   p_joint 9.290780e-05

Joint ci ratio: 3.398911e-01	ci left: 7.777754e-05	ci right 1.102351e-04	k: 132	n:1420000
Cons ci ratio: 1.166722e-04	ci left: 9.986847e-01	ci right 9.988019e-01	k: 1418217	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
CCDC15   1420000 perm   1060 sec   (1340 perm/sec)   p_kst 7.042254e-07   p_cons 9.987444e-01   p_joint 9.295775e-05

Joint ci ratio: 3.411763e-01	ci left: 7.659413e-05	ci right 1.087053e-04	k: 131	n:1430000
Cons ci ratio: 1.163101e-04	ci left: 9.986839e-01	ci right 9.988008e-01	k: 1428203	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
CCDC15   1430000 perm   1072 sec   (1333 perm/sec)   p_kst 6.993007e-07   p_cons 9.987434e-01   p_joint 9.160839e-05

Joint ci ratio: 3.411764e-01	ci left: 7.606222e-05	ci right 1.079504e-04	k: 131	n:1440000
Cons ci ratio: 1.160793e-04	ci left: 9.986803e-01	ci right 9.987969e-01	k: 1438185	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
CCDC15   1440000 perm   1086 sec   (1326 perm/sec)   p_kst 6.944444e-07   p_cons 9.987396e-01   p_joint 9.097222e-05

Joint ci ratio: 3.411766e-01	ci left: 7.553765e-05	ci right 1.072060e-04	k: 131	n:1450000
Cons ci ratio: 1.156590e-04	ci left: 9.986809e-01	ci right 9.987971e-01	k: 1448173	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
CCDC15   1450000 perm   1099 sec   (1320 perm/sec)   p_kst 6.896552e-07   p_cons 9.987400e-01   p_joint 9.034483e-05

Joint ci ratio: 3.411767e-01	ci left: 7.502027e-05	ci right 1.064717e-04	k: 131	n:1460000
Cons ci ratio: 1.150863e-04	ci left: 9.986850e-01	ci right 9.988006e-01	k: 1458166	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
CCDC15   1460000 perm   1112 sec   (1313 perm/sec)   p_kst 6.849315e-07   p_cons 9.987438e-01   p_joint 8.972603e-05

Joint ci ratio: 3.411768e-01	ci left: 7.450992e-05	ci right 1.057474e-04	k: 131	n:1470000
Cons ci ratio: 1.146765e-04	ci left: 9.986856e-01	ci right 9.988008e-01	k: 1468154	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
CCDC15   1470000 perm   1125 sec   (1307 perm/sec)   p_kst 6.802721e-07   p_cons 9.987442e-01   p_joint 8.911565e-05

Joint ci ratio: 3.386210e-01	ci left: 7.524250e-05	ci right 1.064991e-04	k: 133	n:1480000
Cons ci ratio: 1.142403e-04	ci left: 9.986869e-01	ci right 9.988017e-01	k: 1478143	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
CCDC15   1480000 perm   1139 sec   (1300 perm/sec)   p_kst 6.756757e-07   p_cons 9.987453e-01   p_joint 8.986486e-05

Joint ci ratio: 3.373645e-01	ci left: 7.535170e-05	ci right 1.065123e-04	k: 134	n:1490000
Cons ci ratio: 1.139612e-04	ci left: 9.986847e-01	ci right 9.987992e-01	k: 1488127	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
CCDC15   1490000 perm   1152 sec   (1294 perm/sec)   p_kst 6.711409e-07   p_cons 9.987430e-01   p_joint 8.993289e-05

Joint ci ratio: 3.361219e-01	ci left: 7.545966e-05	ci right 1.065250e-04	k: 135	n:1500000
Cons ci ratio: 1.134125e-04	ci left: 9.986887e-01	ci right 9.988027e-01	k: 1498120	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
CCDC15   1500000 perm   1165 sec   (1288 perm/sec)   p_kst 6.666667e-07   p_cons 9.987467e-01   p_joint 9.000000e-05

Joint ci ratio: 3.608510e-01	ci left: 6.408133e-05	ci right 9.286116e-05	k: 117	n:1510000
Cons ci ratio: 1.129604e-04	ci left: 9.986907e-01	ci right 9.988041e-01	k: 1508110	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
CCDC15   1510000 perm   1177 sec   (1282 perm/sec)   p_kst 6.622517e-07   p_cons 9.987483e-01   p_joint 7.748344e-05

Joint ci ratio: 3.593316e-01	ci left: 6.425812e-05	ci right 9.296740e-05	k: 118	n:1520000
Cons ci ratio: 1.124838e-04	ci left: 9.986932e-01	ci right 9.988062e-01	k: 1518101	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
CCDC15   1520000 perm   1191 sec   (1277 perm/sec)   p_kst 6.578947e-07   p_cons 9.987507e-01   p_joint 7.763158e-05

Joint ci ratio: 3.593317e-01	ci left: 6.383813e-05	ci right 9.235977e-05	k: 118	n:1530000
Cons ci ratio: 1.121010e-04	ci left: 9.986937e-01	ci right 9.988063e-01	k: 1528089	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
CCDC15   1530000 perm   1204 sec   (1271 perm/sec)   p_kst 6.535948e-07   p_cons 9.987510e-01   p_joint 7.712418e-05

Joint ci ratio: 3.578313e-01	ci left: 6.401445e-05	ci right 9.246764e-05	k: 119	n:1540000
Cons ci ratio: 1.116638e-04	ci left: 9.986956e-01	ci right 9.988077e-01	k: 1538079	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
CCDC15   1540000 perm   1217 sec   (1265 perm/sec)   p_kst 6.493506e-07   p_cons 9.987526e-01   p_joint 7.727273e-05

Joint ci ratio: 3.563496e-01	ci left: 6.418874e-05	ci right 9.257387e-05	k: 120	n:1550000
Cons ci ratio: 1.113468e-04	ci left: 9.986948e-01	ci right 9.988066e-01	k: 1548065	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
CCDC15   1550000 perm   1230 sec   (1260 perm/sec)   p_kst 6.451613e-07   p_cons 9.987516e-01   p_joint 7.741935e-05

Joint ci ratio: 3.534404e-01	ci left: 6.494504e-05	ci right 9.337632e-05	k: 122	n:1560000
Cons ci ratio: 1.110324e-04	ci left: 9.986940e-01	ci right 9.988055e-01	k: 1558051	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
CCDC15   1560000 perm   1244 sec   (1254 perm/sec)   p_kst 6.410256e-07   p_cons 9.987506e-01   p_joint 7.820513e-05

Joint ci ratio: 3.534405e-01	ci left: 6.453138e-05	ci right 9.278157e-05	k: 122	n:1570000
Cons ci ratio: 1.108898e-04	ci left: 9.986893e-01	ci right 9.988006e-01	k: 1568031	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
CCDC15   1570000 perm   1257 sec   (1249 perm/sec)   p_kst 6.369427e-07   p_cons 9.987459e-01   p_joint 7.770701e-05

Joint ci ratio: 3.563499e-01	ci left: 6.296996e-05	ci right 9.081615e-05	k: 120	n:1580000
Cons ci ratio: 1.106067e-04	ci left: 9.986878e-01	ci right 9.987989e-01	k: 1578016	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
CCDC15   1580000 perm   1271 sec   (1243 perm/sec)   p_kst 6.329114e-07   p_cons 9.987443e-01   p_joint 7.594937e-05

Joint ci ratio: 3.563500e-01	ci left: 6.257392e-05	ci right 9.024498e-05	k: 120	n:1590000
Cons ci ratio: 1.103257e-04	ci left: 9.986865e-01	ci right 9.987973e-01	k: 1588001	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
CCDC15   1590000 perm   1285 sec   (1238 perm/sec)   p_kst 6.289308e-07   p_cons 9.987428e-01   p_joint 7.547170e-05

Joint ci ratio: 3.563500e-01	ci left: 6.218283e-05	ci right 8.968096e-05	k: 120	n:1600000
Cons ci ratio: 1.100466e-04	ci left: 9.986851e-01	ci right 9.987956e-01	k: 1597986	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
CCDC15   1600000 perm   1298 sec   (1232 perm/sec)   p_kst 6.250000e-07   p_cons 9.987413e-01   p_joint 7.500000e-05

Joint ci ratio: 3.520127e-01	ci left: 6.349419e-05	ci right 9.115238e-05	k: 123	n:1610000
Cons ci ratio: 1.097695e-04	ci left: 9.986837e-01	ci right 9.987940e-01	k: 1607971	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
CCDC15   1610000 perm   1312 sec   (1227 perm/sec)   p_kst 6.211180e-07   p_cons 9.987398e-01   p_joint 7.639752e-05

Joint ci ratio: 3.520128e-01	ci left: 6.310225e-05	ci right 9.058972e-05	k: 123	n:1620000
Cons ci ratio: 1.095211e-04	ci left: 9.986818e-01	ci right 9.987917e-01	k: 1617955	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
CCDC15   1620000 perm   1326 sec   (1222 perm/sec)   p_kst 6.172840e-07   p_cons 9.987377e-01   p_joint 7.592593e-05

Joint ci ratio: 3.671287e-01	ci left: 5.713407e-05	ci right 8.334737e-05	k: 113	n:1630000
Cons ci ratio: 1.093801e-04	ci left: 9.986773e-01	ci right 9.987872e-01	k: 1627935	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
CCDC15   1630000 perm   1340 sec   (1216 perm/sec)   p_kst 6.134969e-07   p_cons 9.987331e-01   p_joint 6.932515e-05

Joint ci ratio: 3.655290e-01	ci left: 5.733932e-05	ci right 8.350480e-05	k: 114	n:1640000
Cons ci ratio: 1.089233e-04	ci left: 9.986804e-01	ci right 9.987898e-01	k: 1637927	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
CCDC15   1640000 perm   1354 sec   (1211 perm/sec)   p_kst 6.097561e-07   p_cons 9.987360e-01   p_joint 6.951220e-05

Joint ci ratio: 3.655290e-01	ci left: 5.699181e-05	ci right 8.299871e-05	k: 114	n:1650000
Cons ci ratio: 1.085759e-04	ci left: 9.986810e-01	ci right 9.987900e-01	k: 1647915	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
CCDC15   1650000 perm   1368 sec   (1206 perm/sec)   p_kst 6.060606e-07   p_cons 9.987364e-01   p_joint 6.909091e-05

Joint ci ratio: 3.639500e-01	ci left: 5.719569e-05	ci right 8.315610e-05	k: 115	n:1660000
Cons ci ratio: 1.082576e-04	ci left: 9.986809e-01	ci right 9.987896e-01	k: 1657902	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
CCDC15   1660000 perm   1382 sec   (1201 perm/sec)   p_kst 6.024096e-07   p_cons 9.987361e-01   p_joint 6.927711e-05

Joint ci ratio: 3.623913e-01	ci left: 5.739736e-05	ci right 8.331137e-05	k: 116	n:1670000
Cons ci ratio: 1.079165e-04	ci left: 9.986815e-01	ci right 9.987898e-01	k: 1667890	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
CCDC15   1670000 perm   1397 sec   (1195 perm/sec)   p_kst 5.988024e-07   p_cons 9.987365e-01   p_joint 6.946108e-05

Joint ci ratio: 3.623914e-01	ci left: 5.705571e-05	ci right 8.281547e-05	k: 116	n:1680000
Cons ci ratio: 1.074770e-04	ci left: 9.986845e-01	ci right 9.987924e-01	k: 1677882	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
CCDC15   1680000 perm   1413 sec   (1189 perm/sec)   p_kst 5.952381e-07   p_cons 9.987393e-01   p_joint 6.904762e-05

Joint ci ratio: 3.623915e-01	ci left: 5.671810e-05	ci right 8.232544e-05	k: 116	n:1690000
Cons ci ratio: 1.072689e-04	ci left: 9.986820e-01	ci right 9.987897e-01	k: 1687865	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
CCDC15   1690000 perm   1428 sec   (1184 perm/sec)   p_kst 5.917160e-07   p_cons 9.987367e-01   p_joint 6.863905e-05

Joint ci ratio: 3.980042e-01	ci left: 4.574159e-05	ci right 6.895982e-05	k: 96	n:1700000
Cons ci ratio: 1.069370e-04	ci left: 9.986825e-01	ci right 9.987899e-01	k: 1697853	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
CCDC15   1700000 perm   1442 sec   (1179 perm/sec)   p_kst 5.882353e-07   p_cons 9.987371e-01   p_joint 5.647059e-05

Joint ci ratio: 3.980043e-01	ci left: 4.547409e-05	ci right 6.855655e-05	k: 96	n:1710000
Cons ci ratio: 1.067317e-04	ci left: 9.986801e-01	ci right 9.987872e-01	k: 1707836	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
CCDC15   1710000 perm   1457 sec   (1174 perm/sec)   p_kst 5.847953e-07   p_cons 9.987345e-01   p_joint 5.614035e-05

Joint ci ratio: 3.959684e-01	ci left: 4.573306e-05	ci right 6.879712e-05	k: 97	n:1720000
Cons ci ratio: 1.064048e-04	ci left: 9.986806e-01	ci right 9.987875e-01	k: 1717824	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
CCDC15   1720000 perm   1472 sec   (1169 perm/sec)   p_kst 5.813953e-07   p_cons 9.987349e-01   p_joint 5.639535e-05

Joint ci ratio: 3.900431e-01	ci left: 4.703145e-05	ci right 7.030407e-05	k: 100	n:1730000
Cons ci ratio: 1.059838e-04	ci left: 9.986835e-01	ci right 9.987899e-01	k: 1727816	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
CCDC15   1730000 perm   1486 sec   (1164 perm/sec)   p_kst 5.780347e-07   p_cons 9.987376e-01   p_joint 5.780347e-05

Joint ci ratio: 3.881263e-01	ci left: 4.727964e-05	ci right 7.053068e-05	k: 101	n:1740000
Cons ci ratio: 1.056396e-04	ci left: 9.986846e-01	ci right 9.987907e-01	k: 1737805	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
CCDC15   1740000 perm   1501 sec   (1159 perm/sec)   p_kst 5.747126e-07   p_cons 9.987385e-01   p_joint 5.804598e-05

Joint ci ratio: 3.843761e-01	ci left: 4.804135e-05	ci right 7.138096e-05	k: 103	n:1750000
Cons ci ratio: 1.053702e-04	ci left: 9.986840e-01	ci right 9.987898e-01	k: 1747791	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
CCDC15   1750000 perm   1516 sec   (1155 perm/sec)   p_kst 5.714286e-07   p_cons 9.987377e-01   p_joint 5.885714e-05

Joint ci ratio: 3.843762e-01	ci left: 4.776839e-05	ci right 7.097539e-05	k: 103	n:1760000
Cons ci ratio: 1.050792e-04	ci left: 9.986839e-01	ci right 9.987894e-01	k: 1757778	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
CCDC15   1760000 perm   1531 sec   (1150 perm/sec)   p_kst 5.681818e-07   p_cons 9.987375e-01   p_joint 5.852273e-05

Joint ci ratio: 3.807325e-01	ci left: 4.851979e-05	ci right 7.181249e-05	k: 105	n:1770000
Cons ci ratio: 1.048610e-04	ci left: 9.986821e-01	ci right 9.987874e-01	k: 1767762	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
CCDC15   1770000 perm   1546 sec   (1145 perm/sec)   p_kst 5.649718e-07   p_cons 9.987356e-01   p_joint 5.932203e-05

Joint ci ratio: 3.789492e-01	ci left: 4.875537e-05	ci right 7.202424e-05	k: 106	n:1780000
Cons ci ratio: 1.045742e-04	ci left: 9.986821e-01	ci right 9.987871e-01	k: 1777749	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
CCDC15   1780000 perm   1561 sec   (1140 perm/sec)   p_kst 5.617978e-07   p_cons 9.987354e-01   p_joint 5.955056e-05

Joint ci ratio: 3.754564e-01	ci left: 4.949438e-05	ci right 7.284463e-05	k: 108	n:1790000
Cons ci ratio: 1.042667e-04	ci left: 9.986826e-01	ci right 9.987873e-01	k: 1787737	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
CCDC15   1790000 perm   1576 sec   (1136 perm/sec)   p_kst 5.586592e-07   p_cons 9.987358e-01   p_joint 6.033520e-05

Joint ci ratio: 3.737458e-01	ci left: 4.972267e-05	ci right 7.304757e-05	k: 109	n:1800000
Cons ci ratio: 1.038016e-04	ci left: 9.986871e-01	ci right 9.987913e-01	k: 1797732	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
CCDC15   1800000 perm   1591 sec   (1131 perm/sec)   p_kst 5.555556e-07   p_cons 9.987400e-01   p_joint 6.055556e-05

Joint ci ratio: 3.737459e-01	ci left: 4.944796e-05	ci right 7.264399e-05	k: 109	n:1810000
Cons ci ratio: 1.035688e-04	ci left: 9.986859e-01	ci right 9.987899e-01	k: 1807717	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
CCDC15   1810000 perm   1607 sec   (1127 perm/sec)   p_kst 5.524862e-07   p_cons 9.987387e-01   p_joint 6.022099e-05

Joint ci ratio: 3.737459e-01	ci left: 4.917626e-05	ci right 7.224485e-05	k: 109	n:1820000
Cons ci ratio: 1.032475e-04	ci left: 9.986869e-01	ci right 9.987906e-01	k: 1817706	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
CCDC15   1820000 perm   1622 sec   (1122 perm/sec)   p_kst 5.494505e-07   p_cons 9.987396e-01   p_joint 5.989011e-05

Joint ci ratio: 3.737460e-01	ci left: 4.890754e-05	ci right 7.185007e-05	k: 109	n:1830000
Cons ci ratio: 1.029067e-04	ci left: 9.986885e-01	ci right 9.987918e-01	k: 1827696	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
CCDC15   1830000 perm   1638 sec   (1118 perm/sec)   p_kst 5.464481e-07   p_cons 9.987410e-01   p_joint 5.956284e-05

Joint ci ratio: 3.720586e-01	ci left: 4.913428e-05	ci right 7.205377e-05	k: 110	n:1840000
Cons ci ratio: 1.026356e-04	ci left: 9.986885e-01	ci right 9.987915e-01	k: 1837683	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
CCDC15   1840000 perm   1653 sec   (1113 perm/sec)   p_kst 5.434783e-07   p_cons 9.987408e-01   p_joint 5.978261e-05

Joint ci ratio: 3.771911e-01	ci left: 4.739974e-05	ci right 6.989069e-05	k: 107	n:1850000
Cons ci ratio: 1.023887e-04	ci left: 9.986878e-01	ci right 9.987906e-01	k: 1847669	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
CCDC15   1850000 perm   1669 sec   (1108 perm/sec)   p_kst 5.405405e-07   p_cons 9.987400e-01   p_joint 5.783784e-05

Joint ci ratio: 3.737462e-01	ci left: 4.811870e-05	ci right 7.069121e-05	k: 109	n:1860000
Cons ci ratio: 1.021871e-04	ci left: 9.986861e-01	ci right 9.987887e-01	k: 1857653	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
CCDC15   1860000 perm   1685 sec   (1104 perm/sec)   p_kst 5.376344e-07   p_cons 9.987382e-01   p_joint 5.860215e-05

Joint ci ratio: 3.737462e-01	ci left: 4.786138e-05	ci right 7.031318e-05	k: 109	n:1870000
Cons ci ratio: 1.019864e-04	ci left: 9.986844e-01	ci right 9.987868e-01	k: 1867637	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
CCDC15   1870000 perm   1701 sec   (1099 perm/sec)   p_kst 5.347594e-07   p_cons 9.987364e-01   p_joint 5.828877e-05

Joint ci ratio: 3.720589e-01	ci left: 4.808887e-05	ci right 7.052072e-05	k: 110	n:1880000
Cons ci ratio: 1.017653e-04	ci left: 9.986833e-01	ci right 9.987854e-01	k: 1877622	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
CCDC15   1880000 perm   1717 sec   (1095 perm/sec)   p_kst 5.319149e-07   p_cons 9.987351e-01   p_joint 5.851064e-05

Joint ci ratio: 3.703941e-01	ci left: 4.831417e-05	ci right 7.072584e-05	k: 111	n:1890000
Cons ci ratio: 1.015456e-04	ci left: 9.986821e-01	ci right 9.987841e-01	k: 1887607	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
CCDC15   1890000 perm   1733 sec   (1091 perm/sec)   p_kst 5.291005e-07   p_cons 9.987339e-01   p_joint 5.873016e-05

Joint ci ratio: 3.687515e-01	ci left: 4.853732e-05	ci right 7.092858e-05	k: 112	n:1900000
Cons ci ratio: 1.012218e-04	ci left: 9.986837e-01	ci right 9.987853e-01	k: 1897597	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
CCDC15   1900000 perm   1749 sec   (1086 perm/sec)   p_kst 5.263158e-07   p_cons 9.987353e-01   p_joint 5.894737e-05

Joint ci ratio: 3.807334e-01	ci left: 4.496335e-05	ci right 6.654878e-05	k: 105	n:1910000
Cons ci ratio: 1.175341e-04	ci left: 9.982267e-01	ci right 9.983445e-01	k: 1906727	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
CCDC15   1910000 perm   1765 sec   (1082 perm/sec)   p_kst 5.235602e-07   p_cons 9.982864e-01   p_joint 5.497382e-05

Joint ci ratio: 3.807334e-01	ci left: 4.472917e-05	ci right 6.620217e-05	k: 105	n:1920000
Cons ci ratio: 1.171894e-04	ci left: 9.982280e-01	ci right 9.983455e-01	k: 1916712	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
CCDC15   1920000 perm   1782 sec   (1078 perm/sec)   p_kst 5.208333e-07   p_cons 9.982875e-01   p_joint 5.468750e-05

Joint ci ratio: 3.807335e-01	ci left: 4.449741e-05	ci right 6.585916e-05	k: 105	n:1930000
Cons ci ratio: 1.169893e-04	ci left: 9.982251e-01	ci right 9.983424e-01	k: 1926689	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
CCDC15   1930000 perm   1798 sec   (1073 perm/sec)   p_kst 5.181347e-07   p_cons 9.982845e-01   p_joint 5.440415e-05

Joint ci ratio: 3.789502e-01	ci left: 4.473429e-05	ci right 6.608413e-05	k: 106	n:1940000
Cons ci ratio: 1.166846e-04	ci left: 9.982253e-01	ci right 9.983423e-01	k: 1936672	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
CCDC15   1940000 perm   1815 sec   (1069 perm/sec)   p_kst 5.154639e-07   p_cons 9.982845e-01   p_joint 5.463918e-05

Joint ci ratio: 3.789502e-01	ci left: 4.450488e-05	ci right 6.574524e-05	k: 106	n:1950000
Cons ci ratio: 1.163997e-04	ci left: 9.982250e-01	ci right 9.983417e-01	k: 1946654	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
CCDC15   1950000 perm   1831 sec   (1065 perm/sec)   p_kst 5.128205e-07   p_cons 9.982841e-01   p_joint 5.435897e-05

Joint ci ratio: 3.771917e-01	ci left: 4.473954e-05	ci right 6.596827e-05	k: 107	n:1960000
Cons ci ratio: 1.160477e-04	ci left: 9.982268e-01	ci right 9.983431e-01	k: 1956640	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
CCDC15   1960000 perm   1848 sec   (1061 perm/sec)   p_kst 5.102041e-07   p_cons 9.982857e-01   p_joint 5.459184e-05

Joint ci ratio: 3.754574e-01	ci left: 4.497203e-05	ci right 6.618882e-05	k: 108	n:1970000
Cons ci ratio: 1.157502e-04	ci left: 9.982270e-01	ci right 9.983431e-01	k: 1966623	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
CCDC15   1970000 perm   1864 sec   (1057 perm/sec)   p_kst 5.076142e-07   p_cons 9.982858e-01   p_joint 5.482234e-05

Joint ci ratio: 3.754575e-01	ci left: 4.474490e-05	ci right 6.585453e-05	k: 108	n:1980000
Cons ci ratio: 1.153698e-04	ci left: 9.982298e-01	ci right 9.983455e-01	k: 1976611	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
CCDC15   1980000 perm   1881 sec   (1053 perm/sec)   p_kst 5.050505e-07   p_cons 9.982884e-01   p_joint 5.454545e-05

Joint ci ratio: 3.754575e-01	ci left: 4.452005e-05	ci right 6.552361e-05	k: 108	n:1990000
Cons ci ratio: 1.151283e-04	ci left: 9.982285e-01	ci right 9.983439e-01	k: 1986591	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
CCDC15   1990000 perm   1897 sec   (1049 perm/sec)   p_kst 5.025126e-07   p_cons 9.982869e-01   p_joint 5.427136e-05

Joint ci ratio: 3.754576e-01	ci left: 4.429745e-05	ci right 6.519599e-05	k: 108	n:2000000
Cons ci ratio: 1.148714e-04	ci left: 9.982277e-01	ci right 9.983429e-01	k: 1996572	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
CCDC15   2000000 perm   1914 sec   (1045 perm/sec)   p_kst 5.000000e-07   p_cons 9.982860e-01   p_joint 5.400000e-05

Joint ci ratio: 3.754576e-01	ci left: 4.407706e-05	ci right 6.487163e-05	k: 108	n:2010000
Cons ci ratio: 1.146162e-04	ci left: 9.982269e-01	ci right 9.983418e-01	k: 2006553	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
CCDC15   2010000 perm   1931 sec   (1041 perm/sec)   p_kst 4.975124e-07   p_cons 9.982851e-01   p_joint 5.373134e-05

Joint ci ratio: 3.789506e-01	ci left: 4.296263e-05	ci right 6.346695e-05	k: 106	n:2020000
Cons ci ratio: 1.143296e-04	ci left: 9.982271e-01	ci right 9.983417e-01	k: 2016536	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
CCDC15   2020000 perm   1948 sec   (1037 perm/sec)   p_kst 4.950495e-07   p_cons 9.982851e-01   p_joint 5.247525e-05

Joint ci ratio: 3.789506e-01	ci left: 4.275099e-05	ci right 6.315431e-05	k: 106	n:2030000
Cons ci ratio: 1.140451e-04	ci left: 9.982273e-01	ci right 9.983417e-01	k: 2026519	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
CCDC15   2030000 perm   1965 sec   (1033 perm/sec)   p_kst 4.926108e-07   p_cons 9.982852e-01   p_joint 5.221675e-05

Joint ci ratio: 3.789507e-01	ci left: 4.254142e-05	ci right 6.284473e-05	k: 106	n:2040000
Cons ci ratio: 1.137465e-04	ci left: 9.982281e-01	ci right 9.983421e-01	k: 2036503	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
CCDC15   2040000 perm   1983 sec   (1029 perm/sec)   p_kst 4.901961e-07   p_cons 9.982858e-01   p_joint 5.196078e-05

Joint ci ratio: 3.754578e-01	ci left: 4.321702e-05	ci right 6.360585e-05	k: 108	n:2050000
Cons ci ratio: 1.135310e-04	ci left: 9.982263e-01	ci right 9.983401e-01	k: 2046482	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
CCDC15   2050000 perm   2000 sec   (1025 perm/sec)   p_kst 4.878049e-07   p_cons 9.982839e-01   p_joint 5.268293e-05

Joint ci ratio: 3.754579e-01	ci left: 4.300723e-05	ci right 6.329709e-05	k: 108	n:2060000
Cons ci ratio: 1.131722e-04	ci left: 9.982290e-01	ci right 9.983424e-01	k: 2056470	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
CCDC15   2060000 perm   2017 sec   (1021 perm/sec)   p_kst 4.854369e-07   p_cons 9.982864e-01   p_joint 5.242718e-05

Joint ci ratio: 3.754579e-01	ci left: 4.279946e-05	ci right 6.299131e-05	k: 108	n:2070000
Cons ci ratio: 1.129918e-04	ci left: 9.982262e-01	ci right 9.983395e-01	k: 2066447	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
CCDC15   2070000 perm   2035 sec   (1017 perm/sec)   p_kst 4.830918e-07   p_cons 9.982836e-01   p_joint 5.217391e-05

Joint ci ratio: 3.754580e-01	ci left: 4.259369e-05	ci right 6.268847e-05	k: 108	n:2080000
Cons ci ratio: 1.127804e-04	ci left: 9.982245e-01	ci right 9.983376e-01	k: 2076426	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
CCDC15   2080000 perm   2052 sec   (1014 perm/sec)   p_kst 4.807692e-07   p_cons 9.982817e-01   p_joint 5.192308e-05

Joint ci ratio: 3.737474e-01	ci left: 4.282332e-05	ci right 6.291183e-05	k: 109	n:2090000
Cons ci ratio: 1.126015e-04	ci left: 9.982218e-01	ci right 9.983347e-01	k: 2086403	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
CCDC15   2090000 perm   2070 sec   (1010 perm/sec)   p_kst 4.784689e-07   p_cons 9.982789e-01   p_joint 5.215311e-05

Joint ci ratio: 3.720600e-01	ci left: 4.305096e-05	ci right 6.313287e-05	k: 110	n:2100000
Cons ci ratio: 1.124541e-04	ci left: 9.982182e-01	ci right 9.983309e-01	k: 2096378	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
CCDC15   2100000 perm   2087 sec   (1006 perm/sec)   p_kst 4.761905e-07   p_cons 9.982752e-01   p_joint 5.238095e-05

Joint ci ratio: 4.043080e-01	ci left: 3.557503e-05	ci right 5.399560e-05	k: 93	n:2110000
Cons ci ratio: 1.121526e-04	ci left: 9.982194e-01	ci right 9.983318e-01	k: 2106363	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
CCDC15   2110000 perm   2105 sec   (1002 perm/sec)   p_kst 4.739336e-07   p_cons 9.982763e-01   p_joint 4.407583e-05

Joint ci ratio: 4.021744e-01	ci left: 3.583107e-05	ci right 5.426020e-05	k: 94	n:2120000
Cons ci ratio: 1.118687e-04	ci left: 9.982201e-01	ci right 9.983323e-01	k: 2116347	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
CCDC15   2120000 perm   2124 sec   (998 perm/sec)   p_kst 4.716981e-07   p_cons 9.982769e-01   p_joint 4.433962e-05

Joint ci ratio: 4.021745e-01	ci left: 3.566285e-05	ci right 5.400546e-05	k: 94	n:2130000
Cons ci ratio: 1.115717e-04	ci left: 9.982213e-01	ci right 9.983332e-01	k: 2126332	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
CCDC15   2130000 perm   2142 sec   (994 perm/sec)   p_kst 4.694836e-07   p_cons 9.982779e-01   p_joint 4.413146e-05

Joint ci ratio: 4.000743e-01	ci left: 3.591635e-05	ci right 5.426729e-05	k: 95	n:2140000
Cons ci ratio: 1.112014e-04	ci left: 9.982249e-01	ci right 9.983364e-01	k: 2136322	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
CCDC15   2140000 perm   2160 sec   (991 perm/sec)   p_kst 4.672897e-07   p_cons 9.982813e-01   p_joint 4.439252e-05

Joint ci ratio: 4.000743e-01	ci left: 3.574929e-05	ci right 5.401489e-05	k: 95	n:2150000
Cons ci ratio: 1.109847e-04	ci left: 9.982237e-01	ci right 9.983349e-01	k: 2146302	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
CCDC15   2150000 perm   2178 sec   (987 perm/sec)   p_kst 4.651163e-07   p_cons 9.982800e-01   p_joint 4.418605e-05

Joint ci ratio: 4.000743e-01	ci left: 3.558379e-05	ci right 5.376482e-05	k: 95	n:2160000
Cons ci ratio: 1.107543e-04	ci left: 9.982230e-01	ci right 9.983340e-01	k: 2156283	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
CCDC15   2160000 perm   2196 sec   (984 perm/sec)   p_kst 4.629630e-07   p_cons 9.982792e-01   p_joint 4.398148e-05

Joint ci ratio: 4.000744e-01	ci left: 3.541980e-05	ci right 5.351705e-05	k: 95	n:2170000
Cons ci ratio: 1.105549e-04	ci left: 9.982213e-01	ci right 9.983322e-01	k: 2166262	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
CCDC15   2170000 perm   2214 sec   (980 perm/sec)   p_kst 4.608295e-07   p_cons 9.982774e-01   p_joint 4.377880e-05

Joint ci ratio: 4.000744e-01	ci left: 3.525733e-05	ci right 5.327156e-05	k: 95	n:2180000
Cons ci ratio: 1.103124e-04	ci left: 9.982211e-01	ci right 9.983317e-01	k: 2176244	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
CCDC15   2180000 perm   2232 sec   (977 perm/sec)   p_kst 4.587156e-07   p_cons 9.982771e-01   p_joint 4.357798e-05

Joint ci ratio: 4.000745e-01	ci left: 3.509634e-05	ci right 5.302832e-05	k: 95	n:2190000
Cons ci ratio: 1.101736e-04	ci left: 9.982176e-01	ci right 9.983281e-01	k: 2186219	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
CCDC15   2190000 perm   2250 sec   (973 perm/sec)   p_kst 4.566210e-07   p_cons 9.982735e-01   p_joint 4.337900e-05

Joint ci ratio: 3.980068e-01	ci left: 3.534573e-05	ci right 5.328721e-05	k: 96	n:2200000
Cons ci ratio: 1.099045e-04	ci left: 9.982184e-01	ci right 9.983285e-01	k: 2196203	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
CCDC15   2200000 perm   2268 sec   (970 perm/sec)   p_kst 4.545455e-07   p_cons 9.982741e-01   p_joint 4.363636e-05

Joint ci ratio: 3.959709e-01	ci left: 3.559311e-05	ci right 5.354353e-05	k: 97	n:2210000
Cons ci ratio: 1.096230e-04	ci left: 9.982195e-01	ci right 9.983294e-01	k: 2206188	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
CCDC15   2210000 perm   2287 sec   (966 perm/sec)   p_kst 4.524887e-07   p_cons 9.982751e-01   p_joint 4.389140e-05

Joint ci ratio: 4.825114e-01	ci left: 2.259720e-05	ci right 3.731869e-05	k: 65	n:2220000
Cons ci ratio: 1.094151e-04	ci left: 9.982184e-01	ci right 9.983281e-01	k: 2216168	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
CCDC15   2220000 perm   2305 sec   (963 perm/sec)   p_kst 4.504505e-07   p_cons 9.982739e-01   p_joint 2.927928e-05

Joint ci ratio: 4.825114e-01	ci left: 2.249587e-05	ci right 3.715135e-05	k: 65	n:2230000
Cons ci ratio: 1.090947e-04	ci left: 9.982209e-01	ci right 9.983303e-01	k: 2226156	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
CCDC15   2230000 perm   2324 sec   (960 perm/sec)   p_kst 4.484305e-07   p_cons 9.982762e-01   p_joint 2.914798e-05

Joint ci ratio: 4.825114e-01	ci left: 2.239544e-05	ci right 3.698549e-05	k: 65	n:2240000
Cons ci ratio: 1.088616e-04	ci left: 9.982207e-01	ci right 9.983298e-01	k: 2236138	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
CCDC15   2240000 perm   2343 sec   (956 perm/sec)   p_kst 4.464286e-07   p_cons 9.982759e-01   p_joint 2.901786e-05

Joint ci ratio: 4.825115e-01	ci left: 2.229590e-05	ci right 3.682111e-05	k: 65	n:2250000
Cons ci ratio: 1.085178e-04	ci left: 9.982241e-01	ci right 9.983328e-01	k: 2246128	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
CCDC15   2250000 perm   2361 sec   (953 perm/sec)   p_kst 4.444444e-07   p_cons 9.982791e-01   p_joint 2.888889e-05

Joint ci ratio: 4.825115e-01	ci left: 2.219725e-05	ci right 3.665819e-05	k: 65	n:2260000
Cons ci ratio: 1.083302e-04	ci left: 9.982225e-01	ci right 9.983311e-01	k: 2256107	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
CCDC15   2260000 perm   2380 sec   (949 perm/sec)   p_kst 4.424779e-07   p_cons 9.982774e-01   p_joint 2.876106e-05

Joint ci ratio: 4.825115e-01	ci left: 2.209946e-05	ci right 3.649670e-05	k: 65	n:2270000
Cons ci ratio: 1.081020e-04	ci left: 9.982223e-01	ci right 9.983306e-01	k: 2266089	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
CCDC15   2270000 perm   2399 sec   (946 perm/sec)   p_kst 4.405286e-07   p_cons 9.982771e-01   p_joint 2.863436e-05

Joint ci ratio: 4.825116e-01	ci left: 2.200254e-05	ci right 3.633663e-05	k: 65	n:2280000
Cons ci ratio: 1.079027e-04	ci left: 9.982212e-01	ci right 9.983293e-01	k: 2276069	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
CCDC15   2280000 perm   2418 sec   (943 perm/sec)   p_kst 4.385965e-07   p_cons 9.982759e-01   p_joint 2.850877e-05

Joint ci ratio: 4.788971e-01	ci left: 2.229020e-05	ci right 3.666718e-05	k: 66	n:2290000
Cons ci ratio: 1.076498e-04	ci left: 9.982218e-01	ci right 9.983297e-01	k: 2286053	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
CCDC15   2290000 perm   2437 sec   (940 perm/sec)   p_kst 4.366812e-07   p_cons 9.982764e-01   p_joint 2.882096e-05

Joint ci ratio: 4.788971e-01	ci left: 2.219328e-05	ci right 3.650776e-05	k: 66	n:2300000
Cons ci ratio: 1.074530e-04	ci left: 9.982207e-01	ci right 9.983284e-01	k: 2296033	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
CCDC15   2300000 perm   2456 sec   (936 perm/sec)   p_kst 4.347826e-07   p_cons 9.982752e-01   p_joint 2.869565e-05

Joint ci ratio: 4.753627e-01	ci left: 2.247803e-05	ci right 3.683433e-05	k: 67	n:2310000
Cons ci ratio: 1.072707e-04	ci left: 9.982192e-01	ci right 9.983267e-01	k: 2306012	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
CCDC15   2310000 perm   2476 sec   (933 perm/sec)   p_kst 4.329004e-07   p_cons 9.982736e-01   p_joint 2.900433e-05

Joint ci ratio: 4.753628e-01	ci left: 2.238114e-05	ci right 3.667556e-05	k: 67	n:2320000
Cons ci ratio: 1.070222e-04	ci left: 9.982199e-01	ci right 9.983271e-01	k: 2315996	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
CCDC15   2320000 perm   2495 sec   (930 perm/sec)   p_kst 4.310345e-07   p_cons 9.982741e-01   p_joint 2.887931e-05

Joint ci ratio: 4.753628e-01	ci left: 2.228508e-05	ci right 3.651816e-05	k: 67	n:2330000
Cons ci ratio: 1.068420e-04	ci left: 9.982184e-01	ci right 9.983254e-01	k: 2325975	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
CCDC15   2330000 perm   2515 sec   (927 perm/sec)   p_kst 4.291845e-07   p_cons 9.982725e-01   p_joint 2.875536e-05

Joint ci ratio: 4.719055e-01	ci left: 2.256616e-05	ci right 3.684011e-05	k: 68	n:2340000
Cons ci ratio: 1.066098e-04	ci left: 9.982186e-01	ci right 9.983255e-01	k: 2335958	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
CCDC15   2340000 perm   2534 sec   (923 perm/sec)   p_kst 4.273504e-07   p_cons 9.982726e-01   p_joint 2.905983e-05

Joint ci ratio: 4.719055e-01	ci left: 2.247014e-05	ci right 3.668335e-05	k: 68	n:2350000
Cons ci ratio: 1.063660e-04	ci left: 9.982193e-01	ci right 9.983259e-01	k: 2345942	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
CCDC15   2350000 perm   2553 sec   (920 perm/sec)   p_kst 4.255319e-07   p_cons 9.982732e-01   p_joint 2.893617e-05

Joint ci ratio: 4.719055e-01	ci left: 2.237492e-05	ci right 3.652791e-05	k: 68	n:2360000
Cons ci ratio: 1.060977e-04	ci left: 9.982208e-01	ci right 9.983271e-01	k: 2355928	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
CCDC15   2360000 perm   2573 sec   (917 perm/sec)   p_kst 4.237288e-07   p_cons 9.982746e-01   p_joint 2.881356e-05

Joint ci ratio: 4.788974e-01	ci left: 2.153778e-05	ci right 3.542948e-05	k: 66	n:2370000
Cons ci ratio: 1.060128e-04	ci left: 9.982163e-01	ci right 9.983226e-01	k: 2365900	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
CCDC15   2370000 perm   2593 sec   (914 perm/sec)   p_kst 4.219409e-07   p_cons 9.982700e-01   p_joint 2.784810e-05

Joint ci ratio: 4.753629e-01	ci left: 2.181690e-05	ci right 3.575097e-05	k: 67	n:2380000
Cons ci ratio: 1.057602e-04	ci left: 9.982174e-01	ci right 9.983234e-01	k: 2375885	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
CCDC15   2380000 perm   2612 sec   (911 perm/sec)   p_kst 4.201681e-07   p_cons 9.982710e-01   p_joint 2.815126e-05

Joint ci ratio: 4.719056e-01	ci left: 2.209407e-05	ci right 3.606940e-05	k: 68	n:2390000
Cons ci ratio: 1.055349e-04	ci left: 9.982176e-01	ci right 9.983234e-01	k: 2385868	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
CCDC15   2390000 perm   2632 sec   (908 perm/sec)   p_kst 4.184100e-07   p_cons 9.982711e-01   p_joint 2.845188e-05

Joint ci ratio: 4.719057e-01	ci left: 2.200201e-05	ci right 3.591912e-05	k: 68	n:2400000
Cons ci ratio: 1.052857e-04	ci left: 9.982187e-01	ci right 9.983242e-01	k: 2395853	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
CCDC15   2400000 perm   2652 sec   (905 perm/sec)   p_kst 4.166667e-07   p_cons 9.982721e-01   p_joint 2.833333e-05

Joint ci ratio: 4.719057e-01	ci left: 2.191071e-05	ci right 3.577007e-05	k: 68	n:2410000
Cons ci ratio: 1.051140e-04	ci left: 9.982173e-01	ci right 9.983226e-01	k: 2405832	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
CCDC15   2410000 perm   2671 sec   (902 perm/sec)   p_kst 4.149378e-07   p_cons 9.982705e-01   p_joint 2.821577e-05

Joint ci ratio: 4.719057e-01	ci left: 2.182017e-05	ci right 3.562226e-05	k: 68	n:2420000
Cons ci ratio: 1.049305e-04	ci left: 9.982162e-01	ci right 9.983214e-01	k: 2415812	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
CCDC15   2420000 perm   2691 sec   (899 perm/sec)   p_kst 4.132231e-07   p_cons 9.982694e-01   p_joint 2.809917e-05

Joint ci ratio: 4.685228e-01	ci left: 2.209312e-05	ci right 3.593563e-05	k: 69	n:2430000
Cons ci ratio: 1.046481e-04	ci left: 9.982186e-01	ci right 9.983234e-01	k: 2425800	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
CCDC15   2430000 perm   2711 sec   (896 perm/sec)   p_kst 4.115226e-07   p_cons 9.982716e-01   p_joint 2.839506e-05

Joint ci ratio: 4.685228e-01	ci left: 2.200257e-05	ci right 3.578836e-05	k: 69	n:2440000
Cons ci ratio: 1.043679e-04	ci left: 9.982209e-01	ci right 9.983255e-01	k: 2435788	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
CCDC15   2440000 perm   2731 sec   (894 perm/sec)   p_kst 4.098361e-07   p_cons 9.982738e-01   p_joint 2.827869e-05

Joint ci ratio: 4.685228e-01	ci left: 2.191277e-05	ci right 3.564228e-05	k: 69	n:2450000
Cons ci ratio: 1.040897e-04	ci left: 9.982232e-01	ci right 9.983275e-01	k: 2445776	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
CCDC15   2450000 perm   2751 sec   (891 perm/sec)   p_kst 4.081633e-07   p_cons 9.982759e-01   p_joint 2.816327e-05

Joint ci ratio: 5.192106e-01	ci left: 1.719590e-05	ci right 2.956114e-05	k: 56	n:2460000
Cons ci ratio: 9.680433e-05	ci left: 9.984533e-01	ci right 9.985504e-01	k: 2456316	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
CCDC15   2460000 perm   2771 sec   (888 perm/sec)   p_kst 4.065041e-07   p_cons 9.985024e-01   p_joint 2.276423e-05

Joint ci ratio: 5.192106e-01	ci left: 1.712628e-05	ci right 2.944146e-05	k: 56	n:2470000
Cons ci ratio: 9.666072e-05	ci left: 9.984518e-01	ci right 9.985487e-01	k: 2466297	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
CCDC15   2470000 perm   2791 sec   (885 perm/sec)   p_kst 4.048583e-07   p_cons 9.985008e-01   p_joint 2.267206e-05

Joint ci ratio: 5.192106e-01	ci left: 1.705722e-05	ci right 2.932275e-05	k: 56	n:2480000
Cons ci ratio: 9.647869e-05	ci left: 9.984515e-01	ci right 9.985482e-01	k: 2476281	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
CCDC15   2480000 perm   2811 sec   (882 perm/sec)   p_kst 4.032258e-07   p_cons 9.985004e-01   p_joint 2.258065e-05

Joint ci ratio: 5.192106e-01	ci left: 1.698872e-05	ci right 2.920499e-05	k: 56	n:2490000
Cons ci ratio: 9.632348e-05	ci left: 9.984503e-01	ci right 9.985469e-01	k: 2486263	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
CCDC15   2490000 perm   2832 sec   (879 perm/sec)   p_kst 4.016064e-07   p_cons 9.984992e-01   p_joint 2.248996e-05

Joint ci ratio: 5.192107e-01	ci left: 1.692076e-05	ci right 2.908817e-05	k: 56	n:2500000
Cons ci ratio: 9.611766e-05	ci left: 9.984508e-01	ci right 9.985472e-01	k: 2496249	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
CCDC15   2500000 perm   2852 sec   (876 perm/sec)   p_kst 4.000000e-07   p_cons 9.984996e-01   p_joint 2.240000e-05

Joint ci ratio: 5.192107e-01	ci left: 1.685335e-05	ci right 2.897228e-05	k: 56	n:2510000
Cons ci ratio: 9.590039e-05	ci left: 9.984517e-01	ci right 9.985479e-01	k: 2506236	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
CCDC15   2510000 perm   2873 sec   (874 perm/sec)   p_kst 3.984064e-07   p_cons 9.985004e-01   p_joint 2.231076e-05

Joint ci ratio: 5.147152e-01	ci left: 1.713149e-05	ci right 2.930550e-05	k: 57	n:2520000
Cons ci ratio: 9.569724e-05	ci left: 9.984522e-01	ci right 9.985482e-01	k: 2516222	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
CCDC15   2520000 perm   2893 sec   (871 perm/sec)   p_kst 3.968254e-07   p_cons 9.985008e-01   p_joint 2.261905e-05

Joint ci ratio: 5.147152e-01	ci left: 1.706378e-05	ci right 2.918967e-05	k: 57	n:2530000
Cons ci ratio: 9.553319e-05	ci left: 9.984515e-01	ci right 9.985473e-01	k: 2526205	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
CCDC15   2530000 perm   2914 sec   (868 perm/sec)   p_kst 3.952569e-07   p_cons 9.985000e-01   p_joint 2.252964e-05

Joint ci ratio: 5.147152e-01	ci left: 1.699660e-05	ci right 2.907475e-05	k: 57	n:2540000
Cons ci ratio: 9.533237e-05	ci left: 9.984520e-01	ci right 9.985476e-01	k: 2536191	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
CCDC15   2540000 perm   2935 sec   (866 perm/sec)   p_kst 3.937008e-07   p_cons 9.985004e-01   p_joint 2.244094e-05

Joint ci ratio: 5.103345e-01	ci left: 1.727135e-05	ci right 2.940322e-05	k: 58	n:2550000
Cons ci ratio: 9.515771e-05	ci left: 9.984517e-01	ci right 9.985471e-01	k: 2546175	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
CCDC15   2550000 perm   2955 sec   (863 perm/sec)   p_kst 3.921569e-07   p_cons 9.985000e-01   p_joint 2.274510e-05

Joint ci ratio: 5.103346e-01	ci left: 1.720388e-05	ci right 2.928836e-05	k: 58	n:2560000
Cons ci ratio: 9.487252e-05	ci left: 9.984550e-01	ci right 9.985501e-01	k: 2556168	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
CCDC15   2560000 perm   2977 sec   (860 perm/sec)   p_kst 3.906250e-07   p_cons 9.985031e-01   p_joint 2.265625e-05

Joint ci ratio: 5.103346e-01	ci left: 1.713694e-05	ci right 2.917440e-05	k: 58	n:2570000
Cons ci ratio: 9.468811e-05	ci left: 9.984551e-01	ci right 9.985500e-01	k: 2566153	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
CCDC15   2570000 perm   2998 sec   (857 perm/sec)   p_kst 3.891051e-07   p_cons 9.985031e-01   p_joint 2.256809e-05

Joint ci ratio: 5.103346e-01	ci left: 1.707052e-05	ci right 2.906132e-05	k: 58	n:2580000
Cons ci ratio: 9.452925e-05	ci left: 9.984544e-01	ci right 9.985491e-01	k: 2576136	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
CCDC15   2580000 perm   3020 sec   (854 perm/sec)   p_kst 3.875969e-07   p_cons 9.985023e-01   p_joint 2.248062e-05

Joint ci ratio: 5.103346e-01	ci left: 1.700461e-05	ci right 2.894911e-05	k: 58	n:2590000
Cons ci ratio: 9.438335e-05	ci left: 9.984533e-01	ci right 9.985479e-01	k: 2586118	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
CCDC15   2590000 perm   3041 sec   (852 perm/sec)   p_kst 3.861004e-07   p_cons 9.985012e-01   p_joint 2.239382e-05

Joint ci ratio: 5.103346e-01	ci left: 1.693921e-05	ci right 2.883777e-05	k: 58	n:2600000
Cons ci ratio: 9.418966e-05	ci left: 9.984538e-01	ci right 9.985482e-01	k: 2596104	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
CCDC15   2600000 perm   3062 sec   (849 perm/sec)   p_kst 3.846154e-07   p_cons 9.985015e-01   p_joint 2.230769e-05

Joint ci ratio: 5.103347e-01	ci left: 1.687431e-05	ci right 2.872728e-05	k: 58	n:2610000
Cons ci ratio: 9.399715e-05	ci left: 9.984542e-01	ci right 9.985485e-01	k: 2606090	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
CCDC15   2610000 perm   3084 sec   (846 perm/sec)   p_kst 3.831418e-07   p_cons 9.985019e-01   p_joint 2.222222e-05

Joint ci ratio: 5.103347e-01	ci left: 1.680990e-05	ci right 2.861764e-05	k: 58	n:2620000
Cons ci ratio: 9.384171e-05	ci left: 9.984536e-01	ci right 9.985476e-01	k: 2616073	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
CCDC15   2620000 perm   3105 sec   (844 perm/sec)   p_kst 3.816794e-07   p_cons 9.985011e-01   p_joint 2.213740e-05

Joint ci ratio: 5.103347e-01	ci left: 1.674598e-05	ci right 2.850882e-05	k: 58	n:2630000
Cons ci ratio: 9.365133e-05	ci left: 9.984540e-01	ci right 9.985479e-01	k: 2626059	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
CCDC15   2630000 perm   3126 sec   (841 perm/sec)   p_kst 3.802281e-07   p_cons 9.985015e-01   p_joint 2.205323e-05

Joint ci ratio: 5.103347e-01	ci left: 1.668255e-05	ci right 2.840084e-05	k: 58	n:2640000
Cons ci ratio: 9.336740e-05	ci left: 9.984576e-01	ci right 9.985512e-01	k: 2636053	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
CCDC15   2640000 perm   3148 sec   (839 perm/sec)   p_kst 3.787879e-07   p_cons 9.985049e-01   p_joint 2.196970e-05

Joint ci ratio: 5.103348e-01	ci left: 1.661960e-05	ci right 2.829366e-05	k: 58	n:2650000
Cons ci ratio: 9.316805e-05	ci left: 9.984584e-01	ci right 9.985518e-01	k: 2646040	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
CCDC15   2650000 perm   3170 sec   (836 perm/sec)   p_kst 3.773585e-07   p_cons 9.985057e-01   p_joint 2.188679e-05

Joint ci ratio: 5.103348e-01	ci left: 1.655712e-05	ci right 2.818730e-05	k: 58	n:2660000
Cons ci ratio: 9.296995e-05	ci left: 9.984592e-01	ci right 9.985524e-01	k: 2656027	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
CCDC15   2660000 perm   3193 sec   (833 perm/sec)   p_kst 3.759398e-07   p_cons 9.985064e-01   p_joint 2.180451e-05

Joint ci ratio: 5.103348e-01	ci left: 1.649511e-05	ci right 2.808173e-05	k: 58	n:2670000
Cons ci ratio: 9.290117e-05	ci left: 9.984559e-01	ci right 9.985490e-01	k: 2666003	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
CCDC15   2670000 perm   3215 sec   (831 perm/sec)   p_kst 3.745318e-07   p_cons 9.985030e-01   p_joint 2.172285e-05

Joint ci ratio: 5.103348e-01	ci left: 1.643356e-05	ci right 2.797694e-05	k: 58	n:2680000
Cons ci ratio: 9.269327e-05	ci left: 9.984571e-01	ci right 9.985500e-01	k: 2675991	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
CCDC15   2680000 perm   3237 sec   (828 perm/sec)   p_kst 3.731343e-07   p_cons 9.985041e-01   p_joint 2.164179e-05

Joint ci ratio: 5.103348e-01	ci left: 1.637247e-05	ci right 2.787294e-05	k: 58	n:2690000
Cons ci ratio: 9.244064e-05	ci left: 9.984598e-01	ci right 9.985525e-01	k: 2685983	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
CCDC15   2690000 perm   3259 sec   (825 perm/sec)   p_kst 3.717472e-07   p_cons 9.985067e-01   p_joint 2.156134e-05

Joint ci ratio: 5.103349e-01	ci left: 1.631183e-05	ci right 2.776971e-05	k: 58	n:2700000
Cons ci ratio: 9.224710e-05	ci left: 9.984606e-01	ci right 9.985531e-01	k: 2695970	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
CCDC15   2700000 perm   3281 sec   (823 perm/sec)   p_kst 3.703704e-07   p_cons 9.985074e-01   p_joint 2.148148e-05

Joint ci ratio: 5.060641e-01	ci left: 1.657330e-05	ci right 2.808320e-05	k: 59	n:2710000
Cons ci ratio: 9.208895e-05	ci left: 9.984603e-01	ci right 9.985526e-01	k: 2705954	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
CCDC15   2710000 perm   3304 sec   (820 perm/sec)   p_kst 3.690037e-07   p_cons 9.985070e-01   p_joint 2.177122e-05

Joint ci ratio: 4.978347e-01	ci left: 1.715452e-05	ci right 2.880765e-05	k: 61	n:2720000
Cons ci ratio: 9.192026e-05	ci left: 9.984604e-01	ci right 9.985525e-01	k: 2715939	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
CCDC15   2720000 perm   3326 sec   (818 perm/sec)   p_kst 3.676471e-07   p_cons 9.985070e-01   p_joint 2.242647e-05

Joint ci ratio: 4.978348e-01	ci left: 1.709168e-05	ci right 2.870213e-05	k: 61	n:2730000
Cons ci ratio: 9.174123e-05	ci left: 9.984608e-01	ci right 9.985528e-01	k: 2725925	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
CCDC15   2730000 perm   3349 sec   (815 perm/sec)   p_kst 3.663004e-07   p_cons 9.985073e-01   p_joint 2.234432e-05

Joint ci ratio: 4.978348e-01	ci left: 1.702930e-05	ci right 2.859737e-05	k: 61	n:2740000
Cons ci ratio: 9.151839e-05	ci left: 9.984627e-01	ci right 9.985545e-01	k: 2735915	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
CCDC15   2740000 perm   3371 sec   (813 perm/sec)   p_kst 3.649635e-07   p_cons 9.985091e-01   p_joint 2.226277e-05

Joint ci ratio: 4.978348e-01	ci left: 1.696737e-05	ci right 2.849338e-05	k: 61	n:2750000
Cons ci ratio: 9.133050e-05	ci left: 9.984635e-01	ci right 9.985551e-01	k: 2745902	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
CCDC15   2750000 perm   3393 sec   (810 perm/sec)   p_kst 3.636364e-07   p_cons 9.985098e-01   p_joint 2.218182e-05

Joint ci ratio: 4.978348e-01	ci left: 1.690590e-05	ci right 2.839015e-05	k: 61	n:2760000
Cons ci ratio: 9.112155e-05	ci left: 9.984650e-01	ci right 9.985564e-01	k: 2755891	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
CCDC15   2760000 perm   3416 sec   (808 perm/sec)   p_kst 3.623188e-07   p_cons 9.985112e-01   p_joint 2.210145e-05

Joint ci ratio: 4.978348e-01	ci left: 1.684487e-05	ci right 2.828766e-05	k: 61	n:2770000
Cons ci ratio: 9.095812e-05	ci left: 9.984651e-01	ci right 9.985563e-01	k: 2765876	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
CCDC15   2770000 perm   3438 sec   (806 perm/sec)   p_kst 3.610108e-07   p_cons 9.985112e-01   p_joint 2.202166e-05

Joint ci ratio: 4.202615e-01	ci left: 2.474428e-05	ci right 3.820465e-05	k: 86	n:2780000
Cons ci ratio: 9.076262e-05	ci left: 9.984662e-01	ci right 9.985572e-01	k: 2775864	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
CCDC15   2780000 perm   3462 sec   (803 perm/sec)   p_kst 3.597122e-07   p_cons 9.985122e-01   p_joint 3.093525e-05

Joint ci ratio: 4.202615e-01	ci left: 2.465559e-05	ci right 3.806771e-05	k: 86	n:2790000
Cons ci ratio: 9.059019e-05	ci left: 9.984666e-01	ci right 9.985574e-01	k: 2785850	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
CCDC15   2790000 perm   3485 sec   (801 perm/sec)   p_kst 3.584229e-07   p_cons 9.985125e-01   p_joint 3.082437e-05

Joint ci ratio: 4.155125e-01	ci left: 2.520671e-05	ci right 3.872074e-05	k: 88	n:2800000
Cons ci ratio: 9.044047e-05	ci left: 9.984663e-01	ci right 9.985570e-01	k: 2795834	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
CCDC15   2800000 perm   3507 sec   (798 perm/sec)   p_kst 3.571429e-07   p_cons 9.985121e-01   p_joint 3.142857e-05

Joint ci ratio: 4.155125e-01	ci left: 2.511700e-05	ci right 3.858294e-05	k: 88	n:2810000
Cons ci ratio: 9.028067e-05	ci left: 9.984663e-01	ci right 9.985568e-01	k: 2805819	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
CCDC15   2810000 perm   3531 sec   (796 perm/sec)   p_kst 3.558719e-07   p_cons 9.985121e-01   p_joint 3.131673e-05

Joint ci ratio: 4.155125e-01	ci left: 2.502794e-05	ci right 3.844612e-05	k: 88	n:2820000
Cons ci ratio: 9.015397e-05	ci left: 9.984653e-01	ci right 9.985557e-01	k: 2815801	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
CCDC15   2820000 perm   3554 sec   (794 perm/sec)   p_kst 3.546099e-07   p_cons 9.985110e-01   p_joint 3.120567e-05

Joint ci ratio: 4.155126e-01	ci left: 2.493950e-05	ci right 3.831027e-05	k: 88	n:2830000
Cons ci ratio: 9.000638e-05	ci left: 9.984650e-01	ci right 9.985552e-01	k: 2825785	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
CCDC15   2830000 perm   3577 sec   (791 perm/sec)   p_kst 3.533569e-07   p_cons 9.985106e-01   p_joint 3.109541e-05

Joint ci ratio: 4.155126e-01	ci left: 2.485168e-05	ci right 3.817538e-05	k: 88	n:2840000
Cons ci ratio: 8.981696e-05	ci left: 9.984661e-01	ci right 9.985561e-01	k: 2835773	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
CCDC15   2840000 perm   3600 sec   (789 perm/sec)   p_kst 3.521127e-07   p_cons 9.985116e-01   p_joint 3.098592e-05

Joint ci ratio: 4.155126e-01	ci left: 2.476448e-05	ci right 3.804143e-05	k: 88	n:2850000
Cons ci ratio: 8.960752e-05	ci left: 9.984679e-01	ci right 9.985577e-01	k: 2845763	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
CCDC15   2850000 perm   3624 sec   (787 perm/sec)   p_kst 3.508772e-07   p_cons 9.985133e-01   p_joint 3.087719e-05

Joint ci ratio: 4.155126e-01	ci left: 2.467789e-05	ci right 3.790842e-05	k: 88	n:2860000
Cons ci ratio: 8.940995e-05	ci left: 9.984694e-01	ci right 9.985590e-01	k: 2855752	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
CCDC15   2860000 perm   3647 sec   (784 perm/sec)   p_kst 3.496503e-07   p_cons 9.985147e-01   p_joint 3.076923e-05

Joint ci ratio: 4.155127e-01	ci left: 2.459191e-05	ci right 3.777633e-05	k: 88	n:2870000
Cons ci ratio: 8.921362e-05	ci left: 9.984708e-01	ci right 9.985602e-01	k: 2865741	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
CCDC15   2870000 perm   3671 sec   (782 perm/sec)   p_kst 3.484321e-07   p_cons 9.985160e-01   p_joint 3.066202e-05

Joint ci ratio: 4.202617e-01	ci left: 2.388510e-05	ci right 3.687810e-05	k: 86	n:2880000
Cons ci ratio: 8.903937e-05	ci left: 9.984715e-01	ci right 9.985608e-01	k: 2875728	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
CCDC15   2880000 perm   3695 sec   (779 perm/sec)   p_kst 3.472222e-07   p_cons 9.985167e-01   p_joint 2.986111e-05

Joint ci ratio: 4.202617e-01	ci left: 2.380245e-05	ci right 3.675049e-05	k: 86	n:2890000
Cons ci ratio: 8.886612e-05	ci left: 9.984723e-01	ci right 9.985613e-01	k: 2885715	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
CCDC15   2890000 perm   3719 sec   (777 perm/sec)   p_kst 3.460208e-07   p_cons 9.985173e-01   p_joint 2.975779e-05

Joint ci ratio: 4.202617e-01	ci left: 2.372038e-05	ci right 3.662377e-05	k: 86	n:2900000
Cons ci ratio: 8.876615e-05	ci left: 9.984705e-01	ci right 9.985595e-01	k: 2895695	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
CCDC15   2900000 perm   3742 sec   (775 perm/sec)   p_kst 3.448276e-07   p_cons 9.985155e-01   p_joint 2.965517e-05

Joint ci ratio: 4.202618e-01	ci left: 2.363886e-05	ci right 3.649791e-05	k: 86	n:2910000
Cons ci ratio: 8.866639e-05	ci left: 9.984688e-01	ci right 9.985577e-01	k: 2905675	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
CCDC15   2910000 perm   3767 sec   (772 perm/sec)   p_kst 3.436426e-07   p_cons 9.985137e-01   p_joint 2.955326e-05

Joint ci ratio: 4.178670e-01	ci left: 2.386426e-05	ci right 3.675130e-05	k: 87	n:2920000
Cons ci ratio: 8.852601e-05	ci left: 9.984685e-01	ci right 9.985572e-01	k: 2915659	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
CCDC15   2920000 perm   3792 sec   (770 perm/sec)   p_kst 3.424658e-07   p_cons 9.985134e-01   p_joint 2.979452e-05

Joint ci ratio: 4.178671e-01	ci left: 2.378281e-05	ci right 3.662587e-05	k: 87	n:2930000
Cons ci ratio: 8.838629e-05	ci left: 9.984682e-01	ci right 9.985568e-01	k: 2925643	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
CCDC15   2930000 perm   3815 sec   (768 perm/sec)   p_kst 3.412969e-07   p_cons 9.985130e-01   p_joint 2.969283e-05

Joint ci ratio: 4.178671e-01	ci left: 2.370191e-05	ci right 3.650130e-05	k: 87	n:2940000
Cons ci ratio: 8.823712e-05	ci left: 9.984682e-01	ci right 9.985567e-01	k: 2935628	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
CCDC15   2940000 perm   3839 sec   (766 perm/sec)   p_kst 3.401361e-07   p_cons 9.985129e-01   p_joint 2.959184e-05

Joint ci ratio: 4.178671e-01	ci left: 2.362157e-05	ci right 3.637756e-05	k: 87	n:2950000
Cons ci ratio: 8.808871e-05	ci left: 9.984682e-01	ci right 9.985565e-01	k: 2945613	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
CCDC15   2950000 perm   3863 sec   (764 perm/sec)   p_kst 3.389831e-07   p_cons 9.985129e-01   p_joint 2.949153e-05

Joint ci ratio: 4.155129e-01	ci left: 2.384418e-05	ci right 3.662773e-05	k: 88	n:2960000
Cons ci ratio: 8.796104e-05	ci left: 9.984676e-01	ci right 9.985558e-01	k: 2955596	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
CCDC15   2960000 perm   3888 sec   (761 perm/sec)   p_kst 3.378378e-07   p_cons 9.985122e-01   p_joint 2.972973e-05

Joint ci ratio: 4.131980e-01	ci left: 2.406549e-05	ci right 3.687602e-05	k: 89	n:2970000
Cons ci ratio: 8.781401e-05	ci left: 9.984676e-01	ci right 9.985556e-01	k: 2965581	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
CCDC15   2970000 perm   3911 sec   (759 perm/sec)   p_kst 3.367003e-07   p_cons 9.985121e-01   p_joint 2.996633e-05

Joint ci ratio: 4.131980e-01	ci left: 2.398473e-05	ci right 3.675228e-05	k: 89	n:2980000
Cons ci ratio: 8.765781e-05	ci left: 9.984680e-01	ci right 9.985559e-01	k: 2975567	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
CCDC15   2980000 perm   3936 sec   (757 perm/sec)   p_kst 3.355705e-07   p_cons 9.985124e-01   p_joint 2.986577e-05

Joint ci ratio: 4.131980e-01	ci left: 2.390452e-05	ci right 3.662936e-05	k: 89	n:2990000
Cons ci ratio: 8.743346e-05	ci left: 9.984708e-01	ci right 9.985584e-01	k: 2985560	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
CCDC15   2990000 perm   3960 sec   (755 perm/sec)   p_kst 3.344482e-07   p_cons 9.985151e-01   p_joint 2.976589e-05

Joint ci ratio: 4.131980e-01	ci left: 2.382484e-05	ci right 3.650726e-05	k: 89	n:3000000
Cons ci ratio: 8.725963e-05	ci left: 9.984718e-01	ci right 9.985592e-01	k: 2995548	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
CCDC15   3000000 perm   3985 sec   (753 perm/sec)   p_kst 3.333333e-07   p_cons 9.985160e-01   p_joint 2.966667e-05

Joint ci ratio: 4.131980e-01	ci left: 2.374568e-05	ci right 3.638598e-05	k: 89	n:3010000
Cons ci ratio: 8.713561e-05	ci left: 9.984711e-01	ci right 9.985585e-01	k: 3005531	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
CCDC15   3010000 perm   4010 sec   (751 perm/sec)   p_kst 3.322259e-07   p_cons 9.985153e-01   p_joint 2.956811e-05

Joint ci ratio: 4.131981e-01	ci left: 2.366705e-05	ci right 3.626549e-05	k: 89	n:3020000
Cons ci ratio: 8.700239e-05	ci left: 9.984708e-01	ci right 9.985580e-01	k: 3015515	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
CCDC15   3020000 perm   4035 sec   (748 perm/sec)   p_kst 3.311258e-07   p_cons 9.985149e-01   p_joint 2.947020e-05

Joint ci ratio: 4.109214e-01	ci left: 2.388476e-05	ci right 3.650987e-05	k: 90	n:3030000
Cons ci ratio: 8.694704e-05	ci left: 9.984678e-01	ci right 9.985550e-01	k: 3025491	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
CCDC15   3030000 perm   4060 sec   (746 perm/sec)   p_kst 3.300330e-07   p_cons 9.985119e-01   p_joint 2.970297e-05

Joint ci ratio: 4.109214e-01	ci left: 2.380619e-05	ci right 3.638977e-05	k: 90	n:3040000
Cons ci ratio: 8.677620e-05	ci left: 9.984689e-01	ci right 9.985558e-01	k: 3035479	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
CCDC15   3040000 perm   4085 sec   (744 perm/sec)   p_kst 3.289474e-07   p_cons 9.985128e-01   p_joint 2.960526e-05

Joint ci ratio: 4.109215e-01	ci left: 2.372814e-05	ci right 3.627046e-05	k: 90	n:3050000
Cons ci ratio: 8.663503e-05	ci left: 9.984689e-01	ci right 9.985557e-01	k: 3045464	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
CCDC15   3050000 perm   4110 sec   (742 perm/sec)   p_kst 3.278689e-07   p_cons 9.985128e-01   p_joint 2.950820e-05

Joint ci ratio: 4.064788e-01	ci left: 2.423699e-05	ci right 3.687237e-05	k: 92	n:3060000
Cons ci ratio: 8.644695e-05	ci left: 9.984706e-01	ci right 9.985572e-01	k: 3055454	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
CCDC15   3060000 perm   4135 sec   (740 perm/sec)   p_kst 3.267974e-07   p_cons 9.985144e-01   p_joint 3.006536e-05

Joint ci ratio: 4.043109e-01	ci left: 2.445056e-05	ci right 3.711104e-05	k: 93	n:3070000
Cons ci ratio: 8.627895e-05	ci left: 9.984716e-01	ci right 9.985581e-01	k: 3065442	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
CCDC15   3070000 perm   4160 sec   (738 perm/sec)   p_kst 3.257329e-07   p_cons 9.985153e-01   p_joint 3.029316e-05

Joint ci ratio: 4.043109e-01	ci left: 2.437117e-05	ci right 3.699055e-05	k: 93	n:3080000
Cons ci ratio: 8.614961e-05	ci left: 9.984713e-01	ci right 9.985576e-01	k: 3075426	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
CCDC15   3080000 perm   4185 sec   (736 perm/sec)   p_kst 3.246753e-07   p_cons 9.985149e-01   p_joint 3.019481e-05

Joint ci ratio: 4.043109e-01	ci left: 2.429230e-05	ci right 3.687084e-05	k: 93	n:3090000
Cons ci ratio: 8.597393e-05	ci left: 9.984726e-01	ci right 9.985588e-01	k: 3085415	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
CCDC15   3090000 perm   4210 sec   (734 perm/sec)   p_kst 3.236246e-07   p_cons 9.985162e-01   p_joint 3.009709e-05

Joint ci ratio: 4.043109e-01	ci left: 2.421394e-05	ci right 3.675190e-05	k: 93	n:3100000
Cons ci ratio: 8.578056e-05	ci left: 9.984746e-01	ci right 9.985606e-01	k: 3095406	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
CCDC15   3100000 perm   4236 sec   (732 perm/sec)   p_kst 3.225806e-07   p_cons 9.985181e-01   p_joint 3.000000e-05

Joint ci ratio: 4.000771e-01	ci left: 2.471411e-05	ci right 3.734154e-05	k: 95	n:3110000
Cons ci ratio: 8.564419e-05	ci left: 9.984746e-01	ci right 9.985605e-01	k: 3105391	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
CCDC15   3110000 perm   4261 sec   (730 perm/sec)   p_kst 3.215434e-07   p_cons 9.985180e-01   p_joint 3.054662e-05

Joint ci ratio: 4.000771e-01	ci left: 2.463490e-05	ci right 3.722185e-05	k: 95	n:3120000
Cons ci ratio: 8.548995e-05	ci left: 9.984753e-01	ci right 9.985610e-01	k: 3115378	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
CCDC15   3120000 perm   4286 sec   (728 perm/sec)   p_kst 3.205128e-07   p_cons 9.985186e-01   p_joint 3.044872e-05

Joint ci ratio: 4.000771e-01	ci left: 2.455619e-05	ci right 3.710293e-05	k: 95	n:3130000
Cons ci ratio: 8.533653e-05	ci left: 9.984759e-01	ci right 9.985615e-01	k: 3125365	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
CCDC15   3130000 perm   4311 sec   (726 perm/sec)   p_kst 3.194888e-07   p_cons 9.985192e-01   p_joint 3.035144e-05

Joint ci ratio: 4.000771e-01	ci left: 2.447799e-05	ci right 3.698477e-05	k: 95	n:3140000
Cons ci ratio: 8.522978e-05	ci left: 9.984750e-01	ci right 9.985604e-01	k: 3135347	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
CCDC15   3140000 perm   4337 sec   (724 perm/sec)   p_kst 3.184713e-07   p_cons 9.985182e-01   p_joint 3.025478e-05

Joint ci ratio: 3.980095e-01	ci left: 2.468588e-05	ci right 3.721652e-05	k: 96	n:3150000
Cons ci ratio: 8.511426e-05	ci left: 9.984744e-01	ci right 9.985596e-01	k: 3145330	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
CCDC15   3150000 perm   4361 sec   (722 perm/sec)   p_kst 3.174603e-07   p_cons 9.985175e-01   p_joint 3.047619e-05

Joint ci ratio: 3.980095e-01	ci left: 2.460776e-05	ci right 3.709875e-05	k: 96	n:3160000
Cons ci ratio: 8.497196e-05	ci left: 9.984747e-01	ci right 9.985598e-01	k: 3155316	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
CCDC15   3160000 perm   4387 sec   (720 perm/sec)   p_kst 3.164557e-07   p_cons 9.985177e-01   p_joint 3.037975e-05

Joint ci ratio: 3.939686e-01	ci left: 2.509822e-05	ci right 3.767514e-05	k: 98	n:3170000
Cons ci ratio: 8.489361e-05	ci left: 9.984728e-01	ci right 9.985579e-01	k: 3165295	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
CCDC15   3170000 perm   4414 sec   (718 perm/sec)   p_kst 3.154574e-07   p_cons 9.985158e-01   p_joint 3.091483e-05

Joint ci ratio: 3.939686e-01	ci left: 2.501929e-05	ci right 3.755667e-05	k: 98	n:3180000
Cons ci ratio: 8.472545e-05	ci left: 9.984741e-01	ci right 9.985590e-01	k: 3175284	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
CCDC15   3180000 perm   4440 sec   (716 perm/sec)   p_kst 3.144654e-07   p_cons 9.985170e-01   p_joint 3.081761e-05

Joint ci ratio: 4.000772e-01	ci left: 2.409432e-05	ci right 3.640507e-05	k: 95	n:3190000
Cons ci ratio: 8.461194e-05	ci left: 9.984735e-01	ci right 9.985582e-01	k: 3185267	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
CCDC15   3190000 perm   4465 sec   (714 perm/sec)   p_kst 3.134796e-07   p_cons 9.985163e-01   p_joint 2.978056e-05

Joint ci ratio: 3.980096e-01	ci left: 2.430016e-05	ci right 3.663501e-05	k: 96	n:3200000
Cons ci ratio: 8.445433e-05	ci left: 9.984744e-01	ci right 9.985591e-01	k: 3195255	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
CCDC15   3200000 perm   4491 sec   (713 perm/sec)   p_kst 3.125000e-07   p_cons 9.985172e-01   p_joint 3.000000e-05

Joint ci ratio: 3.980096e-01	ci left: 2.422446e-05	ci right 3.652089e-05	k: 96	n:3210000
Cons ci ratio: 8.433304e-05	ci left: 9.984741e-01	ci right 9.985586e-01	k: 3205239	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
CCDC15   3210000 perm   4517 sec   (711 perm/sec)   p_kst 3.115265e-07   p_cons 9.985168e-01   p_joint 2.990654e-05

Joint ci ratio: 3.980096e-01	ci left: 2.414923e-05	ci right 3.640747e-05	k: 96	n:3220000
Cons ci ratio: 8.422992e-05	ci left: 9.984732e-01	ci right 9.985576e-01	k: 3215221	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
CCDC15   3220000 perm   4543 sec   (709 perm/sec)   p_kst 3.105590e-07   p_cons 9.985158e-01   p_joint 2.981366e-05

Joint ci ratio: 3.980097e-01	ci left: 2.407446e-05	ci right 3.629475e-05	k: 96	n:3230000
Cons ci ratio: 8.407445e-05	ci left: 9.984741e-01	ci right 9.985584e-01	k: 3225209	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
CCDC15   3230000 perm   4569 sec   (707 perm/sec)   p_kst 3.095975e-07   p_cons 9.985167e-01   p_joint 2.972136e-05

Joint ci ratio: 3.980097e-01	ci left: 2.400016e-05	ci right 3.618273e-05	k: 96	n:3240000
Cons ci ratio: 8.397227e-05	ci left: 9.984732e-01	ci right 9.985574e-01	k: 3235191	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
CCDC15   3240000 perm   4595 sec   (705 perm/sec)   p_kst 3.086420e-07   p_cons 9.985157e-01   p_joint 2.962963e-05

Joint ci ratio: 3.980097e-01	ci left: 2.392631e-05	ci right 3.607140e-05	k: 96	n:3250000
Cons ci ratio: 8.387042e-05	ci left: 9.984723e-01	ci right 9.985563e-01	k: 3245173	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
CCDC15   3250000 perm   4621 sec   (703 perm/sec)   p_kst 3.076923e-07   p_cons 9.985148e-01   p_joint 2.953846e-05

Joint ci ratio: 3.980097e-01	ci left: 2.385292e-05	ci right 3.596075e-05	k: 96	n:3260000
Cons ci ratio: 8.370830e-05	ci left: 9.984736e-01	ci right 9.985574e-01	k: 3255162	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
CCDC15   3260000 perm   4647 sec   (701 perm/sec)   p_kst 3.067485e-07   p_cons 9.985160e-01   p_joint 2.944785e-05

Joint ci ratio: 3.980097e-01	ci left: 2.377997e-05	ci right 3.585078e-05	k: 96	n:3270000
Cons ci ratio: 8.356431e-05	ci left: 9.984742e-01	ci right 9.985579e-01	k: 3265149	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
CCDC15   3270000 perm   4673 sec   (700 perm/sec)   p_kst 3.058104e-07   p_cons 9.985165e-01   p_joint 2.935780e-05

Joint ci ratio: 3.980098e-01	ci left: 2.370747e-05	ci right 3.574148e-05	k: 96	n:3280000
Cons ci ratio: 8.340387e-05	ci left: 9.984755e-01	ci right 9.985590e-01	k: 3275138	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
CCDC15   3280000 perm   4700 sec   (698 perm/sec)   p_kst 3.048780e-07   p_cons 9.985177e-01   p_joint 2.926829e-05

Joint ci ratio: 3.980098e-01	ci left: 2.363541e-05	ci right 3.563284e-05	k: 96	n:3290000
Cons ci ratio: 8.327851e-05	ci left: 9.984755e-01	ci right 9.985589e-01	k: 3285123	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
CCDC15   3290000 perm   4726 sec   (696 perm/sec)   p_kst 3.039514e-07   p_cons 9.985176e-01   p_joint 2.917933e-05

Joint ci ratio: 3.959739e-01	ci left: 2.383657e-05	ci right 3.585800e-05	k: 97	n:3300000
Cons ci ratio: 8.311966e-05	ci left: 9.984767e-01	ci right 9.985600e-01	k: 3295112	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
CCDC15   3300000 perm   4752 sec   (694 perm/sec)   p_kst 3.030303e-07   p_cons 9.985188e-01   p_joint 2.939394e-05

Joint ci ratio: 3.939689e-01	ci left: 2.403666e-05	ci right 3.608164e-05	k: 98	n:3310000
Cons ci ratio: 8.295319e-05	ci left: 9.984782e-01	ci right 9.985614e-01	k: 3305102	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
CCDC15   3310000 perm   4780 sec   (693 perm/sec)   p_kst 3.021148e-07   p_cons 9.985202e-01   p_joint 2.960725e-05

Joint ci ratio: 3.919940e-01	ci left: 2.423570e-05	ci right 3.630378e-05	k: 99	n:3320000
Cons ci ratio: 8.279608e-05	ci left: 9.984795e-01	ci right 9.985624e-01	k: 3315091	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
CCDC15   3320000 perm   4807 sec   (691 perm/sec)   p_kst 3.012048e-07   p_cons 9.985214e-01   p_joint 2.981928e-05

Joint ci ratio: 3.919941e-01	ci left: 2.416292e-05	ci right 3.619476e-05	k: 99	n:3330000
Cons ci ratio: 8.259776e-05	ci left: 9.984822e-01	ci right 9.985650e-01	k: 3325085	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
CCDC15   3330000 perm   4834 sec   (689 perm/sec)   p_kst 3.003003e-07   p_cons 9.985240e-01   p_joint 2.972973e-05

Joint ci ratio: 3.919941e-01	ci left: 2.409058e-05	ci right 3.608639e-05	k: 99	n:3340000
Cons ci ratio: 8.244249e-05	ci left: 9.984834e-01	ci right 9.985660e-01	k: 3335074	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
CCDC15   3340000 perm   4861 sec   (687 perm/sec)   p_kst 2.994012e-07   p_cons 9.985251e-01   p_joint 2.964072e-05

Joint ci ratio: 3.919941e-01	ci left: 2.401866e-05	ci right 3.597867e-05	k: 99	n:3350000
Cons ci ratio: 8.237979e-05	ci left: 9.984813e-01	ci right 9.985638e-01	k: 3345052	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
CCDC15   3350000 perm   4888 sec   (685 perm/sec)   p_kst 2.985075e-07   p_cons 9.985230e-01   p_joint 2.955224e-05

Joint ci ratio: 3.919941e-01	ci left: 2.394718e-05	ci right 3.587160e-05	k: 99	n:3360000
Cons ci ratio: 8.229218e-05	ci left: 9.984801e-01	ci right 9.985625e-01	k: 3355033	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
CCDC15   3360000 perm   4916 sec   (683 perm/sec)   p_kst 2.976190e-07   p_cons 9.985217e-01   p_joint 2.946429e-05

Joint ci ratio: 3.919941e-01	ci left: 2.387612e-05	ci right 3.576515e-05	k: 99	n:3370000
Cons ci ratio: 8.216351e-05	ci left: 9.984804e-01	ci right 9.985627e-01	k: 3365019	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
CCDC15   3370000 perm   4944 sec   (682 perm/sec)   p_kst 2.967359e-07   p_cons 9.985220e-01   p_joint 2.937685e-05

Joint ci ratio: 3.919941e-01	ci left: 2.380548e-05	ci right 3.565934e-05	k: 99	n:3380000
Cons ci ratio: 8.204365e-05	ci left: 9.984804e-01	ci right 9.985626e-01	k: 3375004	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
CCDC15   3380000 perm   4971 sec   (680 perm/sec)   p_kst 2.958580e-07   p_cons 9.985219e-01   p_joint 2.928994e-05

Joint ci ratio: 3.900487e-01	ci left: 2.400124e-05	ci right 3.587800e-05	k: 100	n:3390000
Cons ci ratio: 8.194887e-05	ci left: 9.984795e-01	ci right 9.985616e-01	k: 3384986	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
CCDC15   3390000 perm   4998 sec   (678 perm/sec)   p_kst 2.949853e-07   p_cons 9.985209e-01   p_joint 2.949853e-05

Joint ci ratio: 3.881320e-01	ci left: 2.419599e-05	ci right 3.609522e-05	k: 101	n:3400000
Cons ci ratio: 8.183810e-05	ci left: 9.984792e-01	ci right 9.985612e-01	k: 3394970	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
CCDC15   3400000 perm   5025 sec   (677 perm/sec)   p_kst 2.941176e-07   p_cons 9.985206e-01   p_joint 2.970588e-05

Joint ci ratio: 3.862432e-01	ci left: 2.438974e-05	ci right 3.631104e-05	k: 102	n:3410000
Cons ci ratio: 8.171966e-05	ci left: 9.984792e-01	ci right 9.985610e-01	k: 3404955	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
CCDC15   3410000 perm   5053 sec   (675 perm/sec)   p_kst 2.932551e-07   p_cons 9.985205e-01   p_joint 2.991202e-05

Joint ci ratio: 3.862432e-01	ci left: 2.431843e-05	ci right 3.620487e-05	k: 102	n:3420000
Cons ci ratio: 8.160173e-05	ci left: 9.984792e-01	ci right 9.985609e-01	k: 3414940	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
CCDC15   3420000 perm   5080 sec   (673 perm/sec)   p_kst 2.923977e-07   p_cons 9.985205e-01   p_joint 2.982456e-05

Joint ci ratio: 3.862432e-01	ci left: 2.424753e-05	ci right 3.609931e-05	k: 102	n:3430000
Cons ci ratio: 8.146020e-05	ci left: 9.984800e-01	ci right 9.985617e-01	k: 3424928	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
CCDC15   3430000 perm   5108 sec   (672 perm/sec)   p_kst 2.915452e-07   p_cons 9.985213e-01   p_joint 2.973761e-05

Joint ci ratio: 3.862432e-01	ci left: 2.417704e-05	ci right 3.599437e-05	k: 102	n:3440000
Cons ci ratio: 8.131937e-05	ci left: 9.984809e-01	ci right 9.985624e-01	k: 3434916	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
CCDC15   3440000 perm   5135 sec   (670 perm/sec)   p_kst 2.906977e-07   p_cons 9.985221e-01   p_joint 2.965116e-05

Joint ci ratio: 3.862433e-01	ci left: 2.410696e-05	ci right 3.589004e-05	k: 102	n:3450000
Cons ci ratio: 8.117925e-05	ci left: 9.984818e-01	ci right 9.985631e-01	k: 3444904	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
CCDC15   3450000 perm   5163 sec   (668 perm/sec)   p_kst 2.898551e-07   p_cons 9.985229e-01   p_joint 2.956522e-05

Joint ci ratio: 3.843818e-01	ci left: 2.429831e-05	ci right 3.610320e-05	k: 103	n:3460000
Cons ci ratio: 8.107953e-05	ci left: 9.984812e-01	ci right 9.985625e-01	k: 3454887	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
CCDC15   3460000 perm   5190 sec   (667 perm/sec)   p_kst 2.890173e-07   p_cons 9.985223e-01   p_joint 2.976879e-05

Joint ci ratio: 3.881321e-01	ci left: 2.370789e-05	ci right 3.536708e-05	k: 101	n:3470000
Cons ci ratio: 8.091691e-05	ci left: 9.984830e-01	ci right 9.985640e-01	k: 3464878	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
CCDC15   3470000 perm   5218 sec   (665 perm/sec)   p_kst 2.881844e-07   p_cons 9.985239e-01   p_joint 2.910663e-05

Joint ci ratio: 3.881321e-01	ci left: 2.363976e-05	ci right 3.526545e-05	k: 101	n:3480000
Cons ci ratio: 8.077092e-05	ci left: 9.984841e-01	ci right 9.985650e-01	k: 3474867	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
CCDC15   3480000 perm   5246 sec   (663 perm/sec)   p_kst 2.873563e-07   p_cons 9.985250e-01   p_joint 2.902299e-05

Joint ci ratio: 3.862433e-01	ci left: 2.383067e-05	ci right 3.547870e-05	k: 102	n:3490000
Cons ci ratio: 8.067275e-05	ci left: 9.984835e-01	ci right 9.985644e-01	k: 3484850	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
CCDC15   3490000 perm   5275 sec   (662 perm/sec)   p_kst 2.865330e-07   p_cons 9.985244e-01   p_joint 2.922636e-05

Joint ci ratio: 3.862433e-01	ci left: 2.376258e-05	ci right 3.537733e-05	k: 102	n:3500000
Cons ci ratio: 8.054368e-05	ci left: 9.984841e-01	ci right 9.985648e-01	k: 3494837	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
CCDC15   3500000 perm   5303 sec   (660 perm/sec)   p_kst 2.857143e-07   p_cons 9.985249e-01   p_joint 2.914286e-05

Joint ci ratio: 3.862434e-01	ci left: 2.369488e-05	ci right 3.527654e-05	k: 102	n:3510000
Cons ci ratio: 8.043077e-05	ci left: 9.984841e-01	ci right 9.985647e-01	k: 3504822	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
CCDC15   3510000 perm   5331 sec   (658 perm/sec)   p_kst 2.849003e-07   p_cons 9.985248e-01   p_joint 2.905983e-05

Joint ci ratio: 3.862434e-01	ci left: 2.362756e-05	ci right 3.517632e-05	k: 102	n:3520000
Cons ci ratio: 8.027961e-05	ci left: 9.984855e-01	ci right 9.985659e-01	k: 3514812	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
CCDC15   3520000 perm   5359 sec   (657 perm/sec)   p_kst 2.840909e-07   p_cons 9.985261e-01   p_joint 2.897727e-05

Joint ci ratio: 3.825471e-01	ci left: 2.407245e-05	ci right 3.569774e-05	k: 104	n:3530000
Cons ci ratio: 8.015239e-05	ci left: 9.984861e-01	ci right 9.985664e-01	k: 3524799	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
CCDC15   3530000 perm   5387 sec   (655 perm/sec)   p_kst 2.832861e-07   p_cons 9.985266e-01   p_joint 2.946176e-05

Joint ci ratio: 3.825471e-01	ci left: 2.400445e-05	ci right 3.559690e-05	k: 104	n:3540000
Cons ci ratio: 8.004112e-05	ci left: 9.984860e-01	ci right 9.985662e-01	k: 3534784	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
CCDC15   3540000 perm   5417 sec   (654 perm/sec)   p_kst 2.824859e-07   p_cons 9.985266e-01   p_joint 2.937853e-05

Joint ci ratio: 4.202629e-01	ci left: 1.937720e-05	ci right 2.991803e-05	k: 86	n:3550000
Cons ci ratio: 7.992267e-05	ci left: 9.984863e-01	ci right 9.985664e-01	k: 3544770	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
CCDC15   3550000 perm   5445 sec   (652 perm/sec)   p_kst 2.816901e-07   p_cons 9.985268e-01   p_joint 2.422535e-05

Joint ci ratio: 4.202629e-01	ci left: 1.932277e-05	ci right 2.983399e-05	k: 86	n:3560000
Cons ci ratio: 7.985805e-05	ci left: 9.984846e-01	ci right 9.985646e-01	k: 3554749	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
CCDC15   3560000 perm   5473 sec   (650 perm/sec)   p_kst 2.808989e-07   p_cons 9.985250e-01   p_joint 2.415730e-05

Joint ci ratio: 4.202629e-01	ci left: 1.926864e-05	ci right 2.975042e-05	k: 86	n:3570000
Cons ci ratio: 7.975558e-05	ci left: 9.984843e-01	ci right 9.985642e-01	k: 3564733	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
CCDC15   3570000 perm   5502 sec   (649 perm/sec)   p_kst 2.801120e-07   p_cons 9.985246e-01   p_joint 2.408964e-05

Joint ci ratio: 4.178682e-01	ci left: 1.946469e-05	ci right 2.997594e-05	k: 87	n:3580000
Cons ci ratio: 7.960820e-05	ci left: 9.984857e-01	ci right 9.985655e-01	k: 3574723	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
CCDC15   3580000 perm   5531 sec   (647 perm/sec)   p_kst 2.793296e-07   p_cons 9.985260e-01   p_joint 2.430168e-05

Joint ci ratio: 4.178682e-01	ci left: 1.941047e-05	ci right 2.989244e-05	k: 87	n:3590000
Cons ci ratio: 7.954429e-05	ci left: 9.984840e-01	ci right 9.985637e-01	k: 3584702	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
CCDC15   3590000 perm   5559 sec   (646 perm/sec)   p_kst 2.785515e-07   p_cons 9.985242e-01   p_joint 2.423398e-05

Joint ci ratio: 4.178682e-01	ci left: 1.935655e-05	ci right 2.980941e-05	k: 87	n:3600000
Cons ci ratio: 7.939061e-05	ci left: 9.984857e-01	ci right 9.985652e-01	k: 3594693	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
CCDC15   3600000 perm   5588 sec   (644 perm/sec)   p_kst 2.777778e-07   p_cons 9.985258e-01   p_joint 2.416667e-05

Joint ci ratio: 4.178683e-01	ci left: 1.930293e-05	ci right 2.972684e-05	k: 87	n:3610000
Cons ci ratio: 7.931976e-05	ci left: 9.984842e-01	ci right 9.985637e-01	k: 3604673	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
CCDC15   3610000 perm   5616 sec   (643 perm/sec)   p_kst 2.770083e-07   p_cons 9.985244e-01   p_joint 2.409972e-05

Joint ci ratio: 4.178683e-01	ci left: 1.924961e-05	ci right 2.964472e-05	k: 87	n:3620000
Cons ci ratio: 7.920449e-05	ci left: 9.984845e-01	ci right 9.985639e-01	k: 3614659	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
CCDC15   3620000 perm   5645 sec   (641 perm/sec)   p_kst 2.762431e-07   p_cons 9.985246e-01   p_joint 2.403315e-05

Joint ci ratio: 4.178683e-01	ci left: 1.919658e-05	ci right 2.956305e-05	k: 87	n:3630000
Cons ci ratio: 7.906754e-05	ci left: 9.984856e-01	ci right 9.985648e-01	k: 3624648	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
CCDC15   3630000 perm   5674 sec   (640 perm/sec)   p_kst 2.754821e-07   p_cons 9.985256e-01   p_joint 2.396694e-05

Joint ci ratio: 4.178683e-01	ci left: 1.914384e-05	ci right 2.948183e-05	k: 87	n:3640000
Cons ci ratio: 7.892388e-05	ci left: 9.984870e-01	ci right 9.985661e-01	k: 3634638	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
CCDC15   3640000 perm   5704 sec   (638 perm/sec)   p_kst 2.747253e-07   p_cons 9.985269e-01   p_joint 2.390110e-05

Joint ci ratio: 4.178683e-01	ci left: 1.909139e-05	ci right 2.940106e-05	k: 87	n:3650000
Cons ci ratio: 7.880297e-05	ci left: 9.984875e-01	ci right 9.985665e-01	k: 3644625	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
CCDC15   3650000 perm   5733 sec   (637 perm/sec)   p_kst 2.739726e-07   p_cons 9.985274e-01   p_joint 2.383562e-05

Joint ci ratio: 4.178683e-01	ci left: 1.903923e-05	ci right 2.932073e-05	k: 87	n:3660000
Cons ci ratio: 7.872646e-05	ci left: 9.984864e-01	ci right 9.985653e-01	k: 3654606	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
CCDC15   3660000 perm   5762 sec   (635 perm/sec)   p_kst 2.732240e-07   p_cons 9.985262e-01   p_joint 2.377049e-05

Joint ci ratio: 4.178683e-01	ci left: 1.898735e-05	ci right 2.924084e-05	k: 87	n:3670000
Cons ci ratio: 7.862102e-05	ci left: 9.984864e-01	ci right 9.985651e-01	k: 3664591	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
CCDC15   3670000 perm   5792 sec   (634 perm/sec)   p_kst 2.724796e-07   p_cons 9.985262e-01   p_joint 2.370572e-05

Joint ci ratio: 4.178684e-01	ci left: 1.893576e-05	ci right 2.916138e-05	k: 87	n:3680000
Cons ci ratio: 7.850151e-05	ci left: 9.984869e-01	ci right 9.985656e-01	k: 3674578	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
CCDC15   3680000 perm   5821 sec   (632 perm/sec)   p_kst 2.717391e-07   p_cons 9.985266e-01   p_joint 2.364130e-05

Joint ci ratio: 4.178684e-01	ci left: 1.888444e-05	ci right 2.908235e-05	k: 87	n:3690000
Cons ci ratio: 7.837531e-05	ci left: 9.984877e-01	ci right 9.985662e-01	k: 3684566	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
CCDC15   3690000 perm   5852 sec   (631 perm/sec)   p_kst 2.710027e-07   p_cons 9.985274e-01   p_joint 2.357724e-05

Joint ci ratio: 4.178684e-01	ci left: 1.883340e-05	ci right 2.900375e-05	k: 87	n:3700000
Cons ci ratio: 7.828565e-05	ci left: 9.984871e-01	ci right 9.985656e-01	k: 3694549	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
CCDC15   3700000 perm   5882 sec   (629 perm/sec)   p_kst 2.702703e-07   p_cons 9.985268e-01   p_joint 2.351351e-05

Joint ci ratio: 4.178684e-01	ci left: 1.878264e-05	ci right 2.892558e-05	k: 87	n:3710000
Cons ci ratio: 7.818197e-05	ci left: 9.984871e-01	ci right 9.985655e-01	k: 3704534	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
CCDC15   3710000 perm   5911 sec   (628 perm/sec)   p_kst 2.695418e-07   p_cons 9.985267e-01   p_joint 2.345013e-05

Joint ci ratio: 4.178684e-01	ci left: 1.873215e-05	ci right 2.884782e-05	k: 87	n:3720000
Cons ci ratio: 7.806444e-05	ci left: 9.984877e-01	ci right 9.985659e-01	k: 3714521	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
CCDC15   3720000 perm   5942 sec   (626 perm/sec)   p_kst 2.688172e-07   p_cons 9.985272e-01   p_joint 2.338710e-05

Joint ci ratio: 4.178684e-01	ci left: 1.868193e-05	ci right 2.877048e-05	k: 87	n:3730000
Cons ci ratio: 7.798294e-05	ci left: 9.984868e-01	ci right 9.985649e-01	k: 3724503	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
CCDC15   3730000 perm   5973 sec   (624 perm/sec)   p_kst 2.680965e-07   p_cons 9.985263e-01   p_joint 2.332440e-05

Joint ci ratio: 4.178684e-01	ci left: 1.863197e-05	ci right 2.869355e-05	k: 87	n:3740000
Cons ci ratio: 7.787338e-05	ci left: 9.984871e-01	ci right 9.985651e-01	k: 3734489	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
CCDC15   3740000 perm   6003 sec   (623 perm/sec)   p_kst 2.673797e-07   p_cons 9.985265e-01   p_joint 2.326203e-05

Joint ci ratio: 4.178684e-01	ci left: 1.858229e-05	ci right 2.861704e-05	k: 87	n:3750000
Cons ci ratio: 7.774314e-05	ci left: 9.984881e-01	ci right 9.985660e-01	k: 3744478	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
CCDC15   3750000 perm   6032 sec   (622 perm/sec)   p_kst 2.666667e-07   p_cons 9.985275e-01   p_joint 2.320000e-05

Joint ci ratio: 4.178685e-01	ci left: 1.853287e-05	ci right 2.854093e-05	k: 87	n:3760000
Cons ci ratio: 7.765564e-05	ci left: 9.984876e-01	ci right 9.985654e-01	k: 3754461	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
CCDC15   3760000 perm   6061 sec   (620 perm/sec)   p_kst 2.659574e-07   p_cons 9.985269e-01   p_joint 2.313830e-05

Joint ci ratio: 4.155142e-01	ci left: 1.872115e-05	ci right 2.875813e-05	k: 88	n:3770000
Cons ci ratio: 7.754745e-05	ci left: 9.984878e-01	ci right 9.985655e-01	k: 3764447	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
CCDC15   3770000 perm   6091 sec   (619 perm/sec)   p_kst 2.652520e-07   p_cons 9.985271e-01   p_joint 2.334218e-05

Joint ci ratio: 4.155142e-01	ci left: 1.867162e-05	ci right 2.868206e-05	k: 88	n:3780000
Cons ci ratio: 7.747452e-05	ci left: 9.984867e-01	ci right 9.985644e-01	k: 3774428	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
CCDC15   3780000 perm   6121 sec   (618 perm/sec)   p_kst 2.645503e-07   p_cons 9.985259e-01   p_joint 2.328042e-05

Joint ci ratio: 4.155142e-01	ci left: 1.862236e-05	ci right 2.860638e-05	k: 88	n:3790000
Cons ci ratio: 7.736015e-05	ci left: 9.984873e-01	ci right 9.985648e-01	k: 3784415	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
CCDC15   3790000 perm   6151 sec   (616 perm/sec)   p_kst 2.638522e-07   p_cons 9.985264e-01   p_joint 2.321900e-05

Joint ci ratio: 4.131993e-01	ci left: 1.880907e-05	ci right 2.882154e-05	k: 89	n:3800000
Cons ci ratio: 7.724629e-05	ci left: 9.984878e-01	ci right 9.985652e-01	k: 3794402	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
CCDC15   3800000 perm   6181 sec   (615 perm/sec)   p_kst 2.631579e-07   p_cons 9.985268e-01   p_joint 2.342105e-05

Joint ci ratio: 4.131993e-01	ci left: 1.875970e-05	ci right 2.874590e-05	k: 89	n:3810000
Cons ci ratio: 7.714667e-05	ci left: 9.984877e-01	ci right 9.985650e-01	k: 3804387	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
CCDC15   3810000 perm   6211 sec   (613 perm/sec)   p_kst 2.624672e-07   p_cons 9.985268e-01   p_joint 2.335958e-05

Joint ci ratio: 4.109227e-01	ci left: 1.894523e-05	ci right 2.895942e-05	k: 90	n:3820000
Cons ci ratio: 7.706115e-05	ci left: 9.984872e-01	ci right 9.985644e-01	k: 3814370	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
CCDC15   3820000 perm   6241 sec   (612 perm/sec)   p_kst 2.617801e-07   p_cons 9.985262e-01   p_joint 2.356021e-05

Joint ci ratio: 4.109227e-01	ci left: 1.889577e-05	ci right 2.888381e-05	k: 90	n:3830000
Cons ci ratio: 7.696908e-05	ci left: 9.984869e-01	ci right 9.985640e-01	k: 3824354	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
CCDC15   3830000 perm   6271 sec   (611 perm/sec)   p_kst 2.610966e-07   p_cons 9.985258e-01   p_joint 2.349869e-05

Joint ci ratio: 4.109227e-01	ci left: 1.884656e-05	ci right 2.880859e-05	k: 90	n:3840000
Cons ci ratio: 7.688413e-05	ci left: 9.984864e-01	ci right 9.985634e-01	k: 3834337	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
CCDC15   3840000 perm   6302 sec   (609 perm/sec)   p_kst 2.604167e-07   p_cons 9.985253e-01   p_joint 2.343750e-05

Joint ci ratio: 4.086833e-01	ci left: 1.903057e-05	ci right 2.902014e-05	k: 91	n:3850000
Cons ci ratio: 7.682652e-05	ci left: 9.984848e-01	ci right 9.985617e-01	k: 3844316	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
CCDC15   3850000 perm   6333 sec   (608 perm/sec)   p_kst 2.597403e-07   p_cons 9.985236e-01   p_joint 2.363636e-05

Joint ci ratio: 4.086833e-01	ci left: 1.898126e-05	ci right 2.894496e-05	k: 91	n:3860000
Cons ci ratio: 7.671503e-05	ci left: 9.984853e-01	ci right 9.985621e-01	k: 3854303	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
CCDC15   3860000 perm   6364 sec   (607 perm/sec)   p_kst 2.590674e-07   p_cons 9.985241e-01   p_joint 2.357513e-05

Joint ci ratio: 4.086833e-01	ci left: 1.893222e-05	ci right 2.887016e-05	k: 91	n:3870000
Cons ci ratio: 7.664431e-05	ci left: 9.984842e-01	ci right 9.985610e-01	k: 3864284	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
CCDC15   3870000 perm   6394 sec   (605 perm/sec)   p_kst 2.583979e-07   p_cons 9.985230e-01   p_joint 2.351421e-05

Joint ci ratio: 4.086834e-01	ci left: 1.888342e-05	ci right 2.879576e-05	k: 91	n:3880000
Cons ci ratio: 7.655369e-05	ci left: 9.984840e-01	ci right 9.985607e-01	k: 3874268	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
CCDC15   3880000 perm   6425 sec   (604 perm/sec)   p_kst 2.577320e-07   p_cons 9.985227e-01   p_joint 2.345361e-05

Joint ci ratio: 4.086834e-01	ci left: 1.883488e-05	ci right 2.872173e-05	k: 91	n:3890000
Cons ci ratio: 7.643674e-05	ci left: 9.984847e-01	ci right 9.985613e-01	k: 3884256	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
CCDC15   3890000 perm   6455 sec   (603 perm/sec)   p_kst 2.570694e-07   p_cons 9.985234e-01   p_joint 2.339332e-05

Joint ci ratio: 4.086834e-01	ci left: 1.878658e-05	ci right 2.864809e-05	k: 91	n:3900000
Cons ci ratio: 7.637339e-05	ci left: 9.984834e-01	ci right 9.985599e-01	k: 3894236	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
CCDC15   3900000 perm   6487 sec   (601 perm/sec)   p_kst 2.564103e-07   p_cons 9.985221e-01   p_joint 2.333333e-05

Joint ci ratio: 4.178686e-01	ci left: 1.782189e-05	ci right 2.744601e-05	k: 87	n:3910000
Cons ci ratio: 7.623083e-05	ci left: 9.984852e-01	ci right 9.985616e-01	k: 3904228	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
CCDC15   3910000 perm   6518 sec   (600 perm/sec)   p_kst 2.557545e-07   p_cons 9.985238e-01   p_joint 2.225064e-05

Joint ci ratio: 4.178687e-01	ci left: 1.777642e-05	ci right 2.737600e-05	k: 87	n:3920000
Cons ci ratio: 7.616143e-05	ci left: 9.984842e-01	ci right 9.985605e-01	k: 3914209	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
CCDC15   3920000 perm   6549 sec   (599 perm/sec)   p_kst 2.551020e-07   p_cons 9.985227e-01   p_joint 2.219388e-05

Joint ci ratio: 4.178687e-01	ci left: 1.773119e-05	ci right 2.730634e-05	k: 87	n:3930000
Cons ci ratio: 7.602001e-05	ci left: 9.984860e-01	ci right 9.985621e-01	k: 3924201	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
CCDC15   3930000 perm   6581 sec   (597 perm/sec)   p_kst 2.544529e-07   p_cons 9.985244e-01   p_joint 2.213740e-05

Joint ci ratio: 4.178687e-01	ci left: 1.768619e-05	ci right 2.723703e-05	k: 87	n:3940000
Cons ci ratio: 7.593814e-05	ci left: 9.984855e-01	ci right 9.985615e-01	k: 3934184	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
CCDC15   3940000 perm   6612 sec   (596 perm/sec)   p_kst 2.538071e-07   p_cons 9.985239e-01   p_joint 2.208122e-05

Joint ci ratio: 4.438482e-01	ci left: 1.538413e-05	ci right 2.436368e-05	k: 77	n:3950000
Cons ci ratio: 7.587604e-05	ci left: 9.984842e-01	ci right 9.985602e-01	k: 3944164	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
CCDC15   3950000 perm   6643 sec   (595 perm/sec)   p_kst 2.531646e-07   p_cons 9.985225e-01   p_joint 1.949367e-05

Joint ci ratio: 4.438482e-01	ci left: 1.534528e-05	ci right 2.430216e-05	k: 77	n:3960000
Cons ci ratio: 7.578162e-05	ci left: 9.984842e-01	ci right 9.985601e-01	k: 3954149	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
CCDC15   3960000 perm   6675 sec   (593 perm/sec)   p_kst 2.525253e-07   p_cons 9.985225e-01   p_joint 1.944444e-05

Joint ci ratio: 4.410300e-01	ci left: 1.553045e-05	ci right 2.452073e-05	k: 78	n:3970000
Cons ci ratio: 7.569401e-05	ci left: 9.984839e-01	ci right 9.985597e-01	k: 3964133	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
CCDC15   3970000 perm   6708 sec   (592 perm/sec)   p_kst 2.518892e-07   p_cons 9.985222e-01   p_joint 1.964736e-05

Joint ci ratio: 4.410300e-01	ci left: 1.549143e-05	ci right 2.445912e-05	k: 78	n:3980000
Cons ci ratio: 7.556165e-05	ci left: 9.984854e-01	ci right 9.985611e-01	k: 3974124	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
CCDC15   3980000 perm   6740 sec   (591 perm/sec)   p_kst 2.512563e-07   p_cons 9.985236e-01   p_joint 1.959799e-05

Joint ci ratio: 4.410300e-01	ci left: 1.545260e-05	ci right 2.439782e-05	k: 78	n:3990000
Cons ci ratio: 7.551329e-05	ci left: 9.984836e-01	ci right 9.985593e-01	k: 3984102	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
CCDC15   3990000 perm   6772 sec   (589 perm/sec)   p_kst 2.506266e-07   p_cons 9.985218e-01   p_joint 1.954887e-05

Joint ci ratio: 4.410300e-01	ci left: 1.541397e-05	ci right 2.433682e-05	k: 78	n:4000000
Cons ci ratio: 7.547128e-05	ci left: 9.984816e-01	ci right 9.985572e-01	k: 3994079	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
CCDC15   4000000 perm   6803 sec   (588 perm/sec)   p_kst 2.500000e-07   p_cons 9.985198e-01   p_joint 1.950000e-05

Joint ci ratio: 4.382649e-01	ci left: 1.559730e-05	ci right 2.455295e-05	k: 79	n:4010000
Cons ci ratio: 7.537200e-05	ci left: 9.984818e-01	ci right 9.985573e-01	k: 4004065	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
CCDC15   4010000 perm   6835 sec   (587 perm/sec)   p_kst 2.493766e-07   p_cons 9.985200e-01   p_joint 1.970075e-05

Joint ci ratio: 4.382649e-01	ci left: 1.555850e-05	ci right 2.449187e-05	k: 79	n:4020000
Cons ci ratio: 7.527311e-05	ci left: 9.984821e-01	ci right 9.985575e-01	k: 4014051	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
CCDC15   4020000 perm   6867 sec   (585 perm/sec)   p_kst 2.487562e-07   p_cons 9.985201e-01   p_joint 1.965174e-05

Joint ci ratio: 4.382649e-01	ci left: 1.551989e-05	ci right 2.443110e-05	k: 79	n:4030000
Cons ci ratio: 7.517461e-05	ci left: 9.984823e-01	ci right 9.985576e-01	k: 4024037	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
CCDC15   4030000 perm   6899 sec   (584 perm/sec)   p_kst 2.481390e-07   p_cons 9.985203e-01   p_joint 1.960298e-05

Joint ci ratio: 4.382649e-01	ci left: 1.548148e-05	ci right 2.437063e-05	k: 79	n:4040000
Cons ci ratio: 7.510792e-05	ci left: 9.984813e-01	ci right 9.985566e-01	k: 4034018	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
CCDC15   4040000 perm   6930 sec   (583 perm/sec)   p_kst 2.475248e-07   p_cons 9.985193e-01   p_joint 1.955446e-05

Joint ci ratio: 4.382649e-01	ci left: 1.544325e-05	ci right 2.431045e-05	k: 79	n:4050000
Cons ci ratio: 7.497875e-05	ci left: 9.984828e-01	ci right 9.985579e-01	k: 4044009	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
CCDC15   4050000 perm   6962 sec   (582 perm/sec)   p_kst 2.469136e-07   p_cons 9.985207e-01   p_joint 1.950617e-05

Joint ci ratio: 4.382650e-01	ci left: 1.540521e-05	ci right 2.425058e-05	k: 79	n:4060000
Cons ci ratio: 7.490012e-05	ci left: 9.984823e-01	ci right 9.985574e-01	k: 4053992	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
CCDC15   4060000 perm   6995 sec   (580 perm/sec)   p_kst 2.463054e-07   p_cons 9.985202e-01   p_joint 1.945813e-05

Joint ci ratio: 4.382650e-01	ci left: 1.536736e-05	ci right 2.419099e-05	k: 79	n:4070000
Cons ci ratio: 7.482172e-05	ci left: 9.984818e-01	ci right 9.985568e-01	k: 4063975	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
CCDC15   4070000 perm   7028 sec   (579 perm/sec)   p_kst 2.457002e-07   p_cons 9.985197e-01   p_joint 1.941032e-05

Joint ci ratio: 4.382650e-01	ci left: 1.532970e-05	ci right 2.413170e-05	k: 79	n:4080000
Cons ci ratio: 7.471878e-05	ci left: 9.984823e-01	ci right 9.985572e-01	k: 4073962	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
CCDC15   4080000 perm   7060 sec   (578 perm/sec)   p_kst 2.450980e-07   p_cons 9.985201e-01   p_joint 1.936275e-05

Joint ci ratio: 4.382650e-01	ci left: 1.529222e-05	ci right 2.407270e-05	k: 79	n:4090000
Cons ci ratio: 7.457921e-05	ci left: 9.984843e-01	ci right 9.985590e-01	k: 4083955	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
CCDC15   4090000 perm   7093 sec   (577 perm/sec)   p_kst 2.444988e-07   p_cons 9.985220e-01   p_joint 1.931540e-05

Joint ci ratio: 4.382650e-01	ci left: 1.525492e-05	ci right 2.401398e-05	k: 79	n:4100000
Cons ci ratio: 7.448955e-05	ci left: 9.984843e-01	ci right 9.985589e-01	k: 4093940	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
CCDC15   4100000 perm   7125 sec   (575 perm/sec)   p_kst 2.439024e-07   p_cons 9.985220e-01   p_joint 1.926829e-05

Joint ci ratio: 4.382650e-01	ci left: 1.521780e-05	ci right 2.395556e-05	k: 79	n:4110000
Cons ci ratio: 7.445537e-05	ci left: 9.984821e-01	ci right 9.985566e-01	k: 4103916	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
CCDC15   4110000 perm   7158 sec   (574 perm/sec)   p_kst 2.433090e-07   p_cons 9.985197e-01   p_joint 1.922141e-05

Joint ci ratio: 4.382650e-01	ci left: 1.518086e-05	ci right 2.389741e-05	k: 79	n:4120000
Cons ci ratio: 7.434783e-05	ci left: 9.984828e-01	ci right 9.985573e-01	k: 4113904	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
CCDC15   4120000 perm   7191 sec   (573 perm/sec)   p_kst 2.427184e-07   p_cons 9.985204e-01   p_joint 1.917476e-05

Joint ci ratio: 4.382650e-01	ci left: 1.514411e-05	ci right 2.383955e-05	k: 79	n:4130000
Cons ci ratio: 7.426507e-05	ci left: 9.984826e-01	ci right 9.985569e-01	k: 4123888	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
CCDC15   4130000 perm   7224 sec   (572 perm/sec)   p_kst 2.421308e-07   p_cons 9.985201e-01   p_joint 1.912833e-05

Joint ci ratio: 4.355512e-01	ci left: 1.532250e-05	ci right 2.404993e-05	k: 80	n:4140000
Cons ci ratio: 7.415834e-05	ci left: 9.984833e-01	ci right 9.985576e-01	k: 4133876	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
CCDC15   4140000 perm   7258 sec   (570 perm/sec)   p_kst 2.415459e-07   p_cons 9.985208e-01   p_joint 1.932367e-05

Joint ci ratio: 4.302715e-01	ci left: 1.571498e-05	ci right 2.452612e-05	k: 82	n:4150000
Cons ci ratio: 7.406414e-05	ci left: 9.984835e-01	ci right 9.985577e-01	k: 4143862	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
CCDC15   4150000 perm   7291 sec   (569 perm/sec)   p_kst 2.409639e-07   p_cons 9.985210e-01   p_joint 1.975904e-05

Joint ci ratio: 4.302716e-01	ci left: 1.567720e-05	ci right 2.446716e-05	k: 82	n:4160000
Cons ci ratio: 7.395223e-05	ci left: 9.984845e-01	ci right 9.985586e-01	k: 4153851	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
CCDC15   4160000 perm   7324 sec   (568 perm/sec)   p_kst 2.403846e-07   p_cons 9.985219e-01   p_joint 1.971154e-05

Joint ci ratio: 4.277027e-01	ci left: 1.585352e-05	ci right 2.467404e-05	k: 83	n:4170000
Cons ci ratio: 7.387680e-05	ci left: 9.984840e-01	ci right 9.985580e-01	k: 4163834	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
CCDC15   4170000 perm   7358 sec   (567 perm/sec)   p_kst 2.398082e-07   p_cons 9.985213e-01   p_joint 1.990408e-05

Joint ci ratio: 4.251793e-01	ci left: 1.602914e-05	ci right 2.487978e-05	k: 84	n:4180000
Cons ci ratio: 7.377171e-05	ci left: 9.984847e-01	ci right 9.985586e-01	k: 4173822	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
CCDC15   4180000 perm   7392 sec   (565 perm/sec)   p_kst 2.392344e-07   p_cons 9.985220e-01   p_joint 2.009569e-05

Joint ci ratio: 4.302716e-01	ci left: 1.556495e-05	ci right 2.429198e-05	k: 82	n:4190000
Cons ci ratio: 7.364321e-05	ci left: 9.984864e-01	ci right 9.985602e-01	k: 4183814	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
CCDC15   4190000 perm   7426 sec   (564 perm/sec)   p_kst 2.386635e-07   p_cons 9.985236e-01   p_joint 1.957041e-05

Joint ci ratio: 4.302716e-01	ci left: 1.552789e-05	ci right 2.423414e-05	k: 82	n:4200000
Cons ci ratio: 7.352124e-05	ci left: 9.984878e-01	ci right 9.985615e-01	k: 4193805	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
CCDC15   4200000 perm   7460 sec   (563 perm/sec)   p_kst 2.380952e-07   p_cons 9.985250e-01   p_joint 1.952381e-05

Joint ci ratio: 4.251794e-01	ci left: 1.591492e-05	ci right 2.470249e-05	k: 84	n:4210000
Cons ci ratio: 7.341165e-05	ci left: 9.984888e-01	ci right 9.985623e-01	k: 4203794	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
CCDC15   4210000 perm   7492 sec   (562 perm/sec)   p_kst 2.375297e-07   p_cons 9.985259e-01   p_joint 1.995249e-05

Joint ci ratio: 4.251794e-01	ci left: 1.587721e-05	ci right 2.464395e-05	k: 84	n:4220000
Cons ci ratio: 7.329662e-05	ci left: 9.984900e-01	ci right 9.985634e-01	k: 4213784	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
CCDC15   4220000 perm   7526 sec   (561 perm/sec)   p_kst 2.369668e-07   p_cons 9.985270e-01   p_joint 1.990521e-05

Joint ci ratio: 4.227001e-01	ci left: 1.605085e-05	ci right 2.484718e-05	k: 85	n:4230000
Cons ci ratio: 7.317031e-05	ci left: 9.984916e-01	ci right 9.985649e-01	k: 4223776	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
CCDC15   4230000 perm   7559 sec   (560 perm/sec)   p_kst 2.364066e-07   p_cons 9.985286e-01   p_joint 2.009456e-05

Joint ci ratio: 4.227001e-01	ci left: 1.601300e-05	ci right 2.478858e-05	k: 85	n:4240000
Cons ci ratio: 7.304458e-05	ci left: 9.984933e-01	ci right 9.985664e-01	k: 4233768	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
CCDC15   4240000 perm   7593 sec   (558 perm/sec)   p_kst 2.358491e-07   p_cons 9.985302e-01   p_joint 2.004717e-05

Joint ci ratio: 4.227001e-01	ci left: 1.597532e-05	ci right 2.473025e-05	k: 85	n:4250000
Cons ci ratio: 7.298957e-05	ci left: 9.984920e-01	ci right 9.985652e-01	k: 4243748	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
CCDC15   4250000 perm   7626 sec   (557 perm/sec)   p_kst 2.352941e-07   p_cons 9.985289e-01   p_joint 2.000000e-05

Joint ci ratio: 4.227002e-01	ci left: 1.593782e-05	ci right 2.467220e-05	k: 85	n:4260000
Cons ci ratio: 7.285892e-05	ci left: 9.984939e-01	ci right 9.985669e-01	k: 4253741	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
CCDC15   4260000 perm   7660 sec   (556 perm/sec)   p_kst 2.347418e-07   p_cons 9.985308e-01   p_joint 1.995305e-05

Joint ci ratio: 4.227002e-01	ci left: 1.590049e-05	ci right 2.461442e-05	k: 85	n:4270000
Cons ci ratio: 7.275209e-05	ci left: 9.984948e-01	ci right 9.985677e-01	k: 4263730	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
CCDC15   4270000 perm   7693 sec   (555 perm/sec)   p_kst 2.341920e-07   p_cons 9.985316e-01   p_joint 1.990632e-05

Joint ci ratio: 4.227002e-01	ci left: 1.586334e-05	ci right 2.455691e-05	k: 85	n:4280000
Cons ci ratio: 7.268044e-05	ci left: 9.984943e-01	ci right 9.985671e-01	k: 4273713	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
CCDC15   4280000 perm   7728 sec   (554 perm/sec)   p_kst 2.336449e-07   p_cons 9.985311e-01   p_joint 1.985981e-05

Joint ci ratio: 4.227002e-01	ci left: 1.582637e-05	ci right 2.449967e-05	k: 85	n:4290000
Cons ci ratio: 7.259170e-05	ci left: 9.984945e-01	ci right 9.985673e-01	k: 4283699	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
CCDC15   4290000 perm   7762 sec   (553 perm/sec)   p_kst 2.331002e-07   p_cons 9.985312e-01   p_joint 1.981352e-05

Joint ci ratio: 4.227002e-01	ci left: 1.578956e-05	ci right 2.444269e-05	k: 85	n:4300000
Cons ci ratio: 7.250902e-05	ci left: 9.984945e-01	ci right 9.985671e-01	k: 4293684	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
CCDC15   4300000 perm   7796 sec   (552 perm/sec)   p_kst 2.325581e-07   p_cons 9.985312e-01   p_joint 1.976744e-05

Joint ci ratio: 4.227002e-01	ci left: 1.575293e-05	ci right 2.438598e-05	k: 85	n:4310000
Cons ci ratio: 7.244381e-05	ci left: 9.984938e-01	ci right 9.985663e-01	k: 4303666	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
CCDC15   4310000 perm   7830 sec   (550 perm/sec)   p_kst 2.320186e-07   p_cons 9.985304e-01   p_joint 1.972158e-05

Joint ci ratio: 4.227002e-01	ci left: 1.571646e-05	ci right 2.432953e-05	k: 85	n:4320000
Cons ci ratio: 7.241297e-05	ci left: 9.984916e-01	ci right 9.985642e-01	k: 4313642	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
CCDC15   4320000 perm   7864 sec   (549 perm/sec)   p_kst 2.314815e-07   p_cons 9.985282e-01   p_joint 1.967593e-05

Joint ci ratio: 4.227002e-01	ci left: 1.568016e-05	ci right 2.427334e-05	k: 85	n:4330000
Cons ci ratio: 7.235362e-05	ci left: 9.984907e-01	ci right 9.985632e-01	k: 4323623	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
CCDC15   4330000 perm   7899 sec   (548 perm/sec)   p_kst 2.309469e-07   p_cons 9.985273e-01   p_joint 1.963048e-05

Joint ci ratio: 4.227002e-01	ci left: 1.564403e-05	ci right 2.421741e-05	k: 85	n:4340000
Cons ci ratio: 7.224910e-05	ci left: 9.984916e-01	ci right 9.985640e-01	k: 4333612	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
CCDC15   4340000 perm   7933 sec   (547 perm/sec)   p_kst 2.304147e-07   p_cons 9.985281e-01   p_joint 1.958525e-05

Joint ci ratio: 4.227002e-01	ci left: 1.560807e-05	ci right 2.416174e-05	k: 85	n:4350000
Cons ci ratio: 7.215065e-05	ci left: 9.984923e-01	ci right 9.985645e-01	k: 4343600	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
CCDC15   4350000 perm   7967 sec   (546 perm/sec)   p_kst 2.298851e-07   p_cons 9.985287e-01   p_joint 1.954023e-05

Joint ci ratio: 4.227003e-01	ci left: 1.557227e-05	ci right 2.410632e-05	k: 85	n:4360000
Cons ci ratio: 7.206946e-05	ci left: 9.984922e-01	ci right 9.985644e-01	k: 4353585	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
CCDC15   4360000 perm   8002 sec   (545 perm/sec)   p_kst 2.293578e-07   p_cons 9.985287e-01   p_joint 1.949541e-05

Joint ci ratio: 4.227003e-01	ci left: 1.553664e-05	ci right 2.405116e-05	k: 85	n:4370000
Cons ci ratio: 7.194369e-05	ci left: 9.984941e-01	ci right 9.985661e-01	k: 4363578	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
CCDC15   4370000 perm   8036 sec   (544 perm/sec)   p_kst 2.288330e-07   p_cons 9.985304e-01   p_joint 1.945080e-05

Joint ci ratio: 4.227003e-01	ci left: 1.550117e-05	ci right 2.399625e-05	k: 85	n:4380000
Cons ci ratio: 7.187439e-05	ci left: 9.984936e-01	ci right 9.985656e-01	k: 4373561	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
CCDC15   4380000 perm   8070 sec   (543 perm/sec)   p_kst 2.283105e-07   p_cons 9.985299e-01   p_joint 1.940639e-05

Joint ci ratio: 4.227003e-01	ci left: 1.546586e-05	ci right 2.394159e-05	k: 85	n:4390000
Cons ci ratio: 7.183311e-05	ci left: 9.984919e-01	ci right 9.985639e-01	k: 4383539	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
CCDC15   4390000 perm   8105 sec   (542 perm/sec)   p_kst 2.277904e-07   p_cons 9.985282e-01   p_joint 1.936219e-05

Joint ci ratio: 4.202639e-01	ci left: 1.563387e-05	ci right 2.413842e-05	k: 86	n:4400000
Cons ci ratio: 7.174744e-05	ci left: 9.984921e-01	ci right 9.985640e-01	k: 4393525	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
CCDC15   4400000 perm   8140 sec   (541 perm/sec)   p_kst 2.272727e-07   p_cons 9.985284e-01   p_joint 1.954545e-05

Joint ci ratio: 4.178692e-01	ci left: 1.580126e-05	ci right 2.433422e-05	k: 87	n:4410000
Cons ci ratio: 7.164549e-05	ci left: 9.984930e-01	ci right 9.985648e-01	k: 4403514	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
CCDC15   4410000 perm   8175 sec   (539 perm/sec)   p_kst 2.267574e-07   p_cons 9.985293e-01   p_joint 1.972789e-05

Joint ci ratio: 4.178692e-01	ci left: 1.576551e-05	ci right 2.427917e-05	k: 87	n:4420000
Cons ci ratio: 7.158804e-05	ci left: 9.984921e-01	ci right 9.985638e-01	k: 4413495	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
CCDC15   4420000 perm   8210 sec   (538 perm/sec)   p_kst 2.262443e-07   p_cons 9.985283e-01   p_joint 1.968326e-05

Joint ci ratio: 4.178692e-01	ci left: 1.572992e-05	ci right 2.422436e-05	k: 87	n:4430000
Cons ci ratio: 7.149226e-05	ci left: 9.984928e-01	ci right 9.985644e-01	k: 4423483	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
CCDC15   4430000 perm   8244 sec   (537 perm/sec)   p_kst 2.257336e-07   p_cons 9.985289e-01   p_joint 1.963883e-05

Joint ci ratio: 4.155150e-01	ci left: 1.589610e-05	ci right 2.441852e-05	k: 88	n:4440000
Cons ci ratio: 7.140780e-05	ci left: 9.984930e-01	ci right 9.985645e-01	k: 4433469	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
CCDC15   4440000 perm   8280 sec   (536 perm/sec)   p_kst 2.252252e-07   p_cons 9.985291e-01   p_joint 1.981982e-05

Joint ci ratio: 4.155150e-01	ci left: 1.586038e-05	ci right 2.436364e-05	k: 88	n:4450000
Cons ci ratio: 7.133455e-05	ci left: 9.984927e-01	ci right 9.985642e-01	k: 4443453	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
CCDC15   4450000 perm   8316 sec   (535 perm/sec)   p_kst 2.247191e-07   p_cons 9.985288e-01   p_joint 1.977528e-05

Joint ci ratio: 4.132001e-01	ci left: 1.602566e-05	ci right 2.455648e-05	k: 89	n:4460000
Cons ci ratio: 7.126695e-05	ci left: 9.984922e-01	ci right 9.985636e-01	k: 4453436	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
CCDC15   4460000 perm   8350 sec   (534 perm/sec)   p_kst 2.242152e-07   p_cons 9.985283e-01   p_joint 1.995516e-05

Joint ci ratio: 4.132001e-01	ci left: 1.598981e-05	ci right 2.450155e-05	k: 89	n:4470000
Cons ci ratio: 7.121038e-05	ci left: 9.984913e-01	ci right 9.985626e-01	k: 4463417	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
CCDC15   4470000 perm   8385 sec   (533 perm/sec)   p_kst 2.237136e-07   p_cons 9.985273e-01   p_joint 1.991051e-05

Joint ci ratio: 4.132001e-01	ci left: 1.595412e-05	ci right 2.444685e-05	k: 89	n:4480000
Cons ci ratio: 7.109993e-05	ci left: 9.984926e-01	ci right 9.985639e-01	k: 4473408	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
CCDC15   4480000 perm   8421 sec   (532 perm/sec)   p_kst 2.232143e-07   p_cons 9.985286e-01   p_joint 1.986607e-05

Joint ci ratio: 4.132001e-01	ci left: 1.591858e-05	ci right 2.439241e-05	k: 89	n:4490000
Cons ci ratio: 7.100070e-05	ci left: 9.984935e-01	ci right 9.985646e-01	k: 4483397	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
CCDC15   4490000 perm   8457 sec   (531 perm/sec)   p_kst 2.227171e-07   p_cons 9.985294e-01   p_joint 1.982183e-05

Joint ci ratio: 4.132001e-01	ci left: 1.588321e-05	ci right 2.433820e-05	k: 89	n:4500000
Cons ci ratio: 7.091797e-05	ci left: 9.984937e-01	ci right 9.985647e-01	k: 4493383	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
CCDC15   4500000 perm   8493 sec   (530 perm/sec)   p_kst 2.222222e-07   p_cons 9.985296e-01   p_joint 1.977778e-05

Joint ci ratio: 4.132001e-01	ci left: 1.584799e-05	ci right 2.428424e-05	k: 89	n:4510000
Cons ci ratio: 7.085156e-05	ci left: 9.984932e-01	ci right 9.985642e-01	k: 4503366	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
CCDC15   4510000 perm   8528 sec   (529 perm/sec)   p_kst 2.217295e-07   p_cons 9.985290e-01   p_joint 1.973392e-05

Joint ci ratio: 4.109235e-01	ci left: 1.601123e-05	ci right 2.447456e-05	k: 90	n:4520000
Cons ci ratio: 7.076935e-05	ci left: 9.984934e-01	ci right 9.985643e-01	k: 4513352	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
CCDC15   4520000 perm   8563 sec   (528 perm/sec)   p_kst 2.212389e-07   p_cons 9.985292e-01   p_joint 1.991150e-05

Joint ci ratio: 4.086841e-01	ci left: 1.617388e-05	ci right 2.466392e-05	k: 91	n:4530000
Cons ci ratio: 7.071398e-05	ci left: 9.984925e-01	ci right 9.985633e-01	k: 4523333	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
CCDC15   4530000 perm   8599 sec   (527 perm/sec)   p_kst 2.207506e-07   p_cons 9.985283e-01   p_joint 2.008830e-05

Joint ci ratio: 4.086841e-01	ci left: 1.613825e-05	ci right 2.460960e-05	k: 91	n:4540000
Cons ci ratio: 7.065871e-05	ci left: 9.984916e-01	ci right 9.985624e-01	k: 4533314	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
CCDC15   4540000 perm   8635 sec   (526 perm/sec)   p_kst 2.202643e-07   p_cons 9.985273e-01   p_joint 2.004405e-05

Joint ci ratio: 4.064809e-01	ci left: 1.630003e-05	ci right 2.479771e-05	k: 92	n:4550000
Cons ci ratio: 7.059300e-05	ci left: 9.984911e-01	ci right 9.985618e-01	k: 4543297	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
CCDC15   4550000 perm   8671 sec   (525 perm/sec)   p_kst 2.197802e-07   p_cons 9.985268e-01   p_joint 2.021978e-05

Joint ci ratio: 4.064809e-01	ci left: 1.626428e-05	ci right 2.474333e-05	k: 92	n:4560000
Cons ci ratio: 7.054322e-05	ci left: 9.984900e-01	ci right 9.985607e-01	k: 4553277	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
CCDC15   4560000 perm   8707 sec   (524 perm/sec)   p_kst 2.192982e-07   p_cons 9.985257e-01   p_joint 2.017544e-05

Joint ci ratio: 4.064809e-01	ci left: 1.622869e-05	ci right 2.468919e-05	k: 92	n:4570000
Cons ci ratio: 7.048303e-05	ci left: 9.984893e-01	ci right 9.985599e-01	k: 4563259	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
CCDC15   4570000 perm   8744 sec   (523 perm/sec)   p_kst 2.188184e-07   p_cons 9.985249e-01   p_joint 2.013129e-05

Joint ci ratio: 4.064809e-01	ci left: 1.619326e-05	ci right 2.463528e-05	k: 92	n:4580000
Cons ci ratio: 7.040212e-05	ci left: 9.984895e-01	ci right 9.985600e-01	k: 4573245	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
CCDC15   4580000 perm   8779 sec   (522 perm/sec)   p_kst 2.183406e-07   p_cons 9.985251e-01   p_joint 2.008734e-05

Joint ci ratio: 4.109235e-01	ci left: 1.576705e-05	ci right 2.410131e-05	k: 90	n:4590000
Cons ci ratio: 7.030587e-05	ci left: 9.984904e-01	ci right 9.985608e-01	k: 4583234	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
CCDC15   4590000 perm   8815 sec   (521 perm/sec)   p_kst 2.178649e-07   p_cons 9.985259e-01   p_joint 1.960784e-05

Joint ci ratio: 4.109235e-01	ci left: 1.573277e-05	ci right 2.404892e-05	k: 90	n:4600000
Cons ci ratio: 7.023593e-05	ci left: 9.984902e-01	ci right 9.985605e-01	k: 4593218	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
CCDC15   4600000 perm   8851 sec   (520 perm/sec)   p_kst 2.173913e-07   p_cons 9.985257e-01   p_joint 1.956522e-05

Joint ci ratio: 4.109236e-01	ci left: 1.569865e-05	ci right 2.399675e-05	k: 90	n:4610000
Cons ci ratio: 7.018170e-05	ci left: 9.984893e-01	ci right 9.985596e-01	k: 4603199	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
CCDC15   4610000 perm   8887 sec   (519 perm/sec)   p_kst 2.169197e-07   p_cons 9.985247e-01   p_joint 1.952278e-05

Joint ci ratio: 4.109236e-01	ci left: 1.566467e-05	ci right 2.394481e-05	k: 90	n:4620000
Cons ci ratio: 7.011211e-05	ci left: 9.984890e-01	ci right 9.985593e-01	k: 4613183	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
CCDC15   4620000 perm   8924 sec   (518 perm/sec)   p_kst 2.164502e-07   p_cons 9.985245e-01   p_joint 1.948052e-05

Joint ci ratio: 4.109236e-01	ci left: 1.563083e-05	ci right 2.389310e-05	k: 90	n:4630000
Cons ci ratio: 7.004273e-05	ci left: 9.984888e-01	ci right 9.985590e-01	k: 4623167	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
CCDC15   4630000 perm   8961 sec   (517 perm/sec)   p_kst 2.159827e-07   p_cons 9.985242e-01   p_joint 1.943844e-05

Joint ci ratio: 4.109236e-01	ci left: 1.559715e-05	ci right 2.384160e-05	k: 90	n:4640000
Cons ci ratio: 6.995309e-05	ci left: 9.984894e-01	ci right 9.985595e-01	k: 4633155	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
CCDC15   4640000 perm   8998 sec   (516 perm/sec)   p_kst 2.155172e-07   p_cons 9.985248e-01   p_joint 1.939655e-05

Joint ci ratio: 4.227005e-01	ci left: 1.460110e-05	ci right 2.260292e-05	k: 85	n:4650000
Cons ci ratio: 6.989948e-05	ci left: 9.984886e-01	ci right 9.985586e-01	k: 4643136	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
CCDC15   4650000 perm   9034 sec   (515 perm/sec)   p_kst 2.150538e-07   p_cons 9.985239e-01   p_joint 1.827957e-05

Joint ci ratio: 4.227005e-01	ci left: 1.456976e-05	ci right 2.255442e-05	k: 85	n:4660000
Cons ci ratio: 6.982565e-05	ci left: 9.984885e-01	ci right 9.985585e-01	k: 4653121	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
CCDC15   4660000 perm   9070 sec   (514 perm/sec)   p_kst 2.145923e-07   p_cons 9.985238e-01   p_joint 1.824034e-05

Joint ci ratio: 4.227005e-01	ci left: 1.453856e-05	ci right 2.250612e-05	k: 85	n:4670000
Cons ci ratio: 6.973178e-05	ci left: 9.984894e-01	ci right 9.985592e-01	k: 4663110	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
CCDC15   4670000 perm   9107 sec   (513 perm/sec)   p_kst 2.141328e-07   p_cons 9.985246e-01   p_joint 1.820128e-05

Joint ci ratio: 4.227005e-01	ci left: 1.450750e-05	ci right 2.245803e-05	k: 85	n:4680000
Cons ci ratio: 6.964332e-05	ci left: 9.984900e-01	ci right 9.985598e-01	k: 4673098	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
CCDC15   4680000 perm   9143 sec   (512 perm/sec)   p_kst 2.136752e-07   p_cons 9.985252e-01   p_joint 1.816239e-05

Joint ci ratio: 4.302720e-01	ci left: 1.390557e-05	ci right 2.170222e-05	k: 82	n:4690000
Cons ci ratio: 6.960050e-05	ci left: 9.984887e-01	ci right 9.985584e-01	k: 4683077	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
CCDC15   4690000 perm   9180 sec   (511 perm/sec)   p_kst 2.132196e-07   p_cons 9.985239e-01   p_joint 1.748401e-05

Joint ci ratio: 4.302721e-01	ci left: 1.387599e-05	ci right 2.165604e-05	k: 82	n:4700000
Cons ci ratio: 6.952760e-05	ci left: 9.984887e-01	ci right 9.985583e-01	k: 4693062	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
CCDC15   4700000 perm   9217 sec   (510 perm/sec)   p_kst 2.127660e-07   p_cons 9.985238e-01   p_joint 1.744681e-05

Joint ci ratio: 4.302721e-01	ci left: 1.384653e-05	ci right 2.161007e-05	k: 82	n:4710000
Cons ci ratio: 6.943993e-05	ci left: 9.984893e-01	ci right 9.985589e-01	k: 4703050	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
CCDC15   4710000 perm   9255 sec   (509 perm/sec)   p_kst 2.123142e-07   p_cons 9.985244e-01   p_joint 1.740977e-05

Joint ci ratio: 4.302721e-01	ci left: 1.381719e-05	ci right 2.156428e-05	k: 82	n:4720000
Cons ci ratio: 6.934260e-05	ci left: 9.984904e-01	ci right 9.985598e-01	k: 4713040	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
CCDC15   4720000 perm   9292 sec   (508 perm/sec)   p_kst 2.118644e-07   p_cons 9.985254e-01   p_joint 1.737288e-05

Joint ci ratio: 4.302721e-01	ci left: 1.378798e-05	ci right 2.151869e-05	k: 82	n:4730000
Cons ci ratio: 6.929040e-05	ci left: 9.984895e-01	ci right 9.985589e-01	k: 4723021	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
CCDC15   4730000 perm   9329 sec   (507 perm/sec)   p_kst 2.114165e-07   p_cons 9.985245e-01   p_joint 1.733615e-05

Joint ci ratio: 4.302721e-01	ci left: 1.375889e-05	ci right 2.147329e-05	k: 82	n:4740000
Cons ci ratio: 6.923334e-05	ci left: 9.984889e-01	ci right 9.985582e-01	k: 4733003	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
CCDC15   4740000 perm   9366 sec   (506 perm/sec)   p_kst 2.109705e-07   p_cons 9.985238e-01   p_joint 1.729958e-05

Joint ci ratio: 4.302721e-01	ci left: 1.372992e-05	ci right 2.142809e-05	k: 82	n:4750000
Cons ci ratio: 6.913196e-05	ci left: 9.984901e-01	ci right 9.985594e-01	k: 4742994	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
CCDC15   4750000 perm   9404 sec   (505 perm/sec)   p_kst 2.105263e-07   p_cons 9.985251e-01   p_joint 1.726316e-05

Joint ci ratio: 4.302721e-01	ci left: 1.370108e-05	ci right 2.138307e-05	k: 82	n:4760000
Cons ci ratio: 6.903590e-05	ci left: 9.984912e-01	ci right 9.985603e-01	k: 4752984	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
CCDC15   4760000 perm   9441 sec   (504 perm/sec)   p_kst 2.100840e-07   p_cons 9.985261e-01   p_joint 1.722689e-05

Joint ci ratio: 4.302721e-01	ci left: 1.367236e-05	ci right 2.133824e-05	k: 82	n:4770000
Cons ci ratio: 6.898440e-05	ci left: 9.984903e-01	ci right 9.985594e-01	k: 4762965	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
CCDC15   4770000 perm   9479 sec   (503 perm/sec)   p_kst 2.096436e-07   p_cons 9.985252e-01   p_joint 1.719078e-05

Joint ci ratio: 4.302721e-01	ci left: 1.364375e-05	ci right 2.129360e-05	k: 82	n:4780000
Cons ci ratio: 6.890364e-05	ci left: 9.984907e-01	ci right 9.985597e-01	k: 4772952	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
CCDC15   4780000 perm   9516 sec   (502 perm/sec)   p_kst 2.092050e-07   p_cons 9.985255e-01   p_joint 1.715481e-05

Joint ci ratio: 4.277033e-01	ci left: 1.380149e-05	ci right 2.148033e-05	k: 83	n:4790000
Cons ci ratio: 6.882315e-05	ci left: 9.984911e-01	ci right 9.985600e-01	k: 4782939	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
CCDC15   4790000 perm   9554 sec   (501 perm/sec)   p_kst 2.087683e-07   p_cons 9.985259e-01   p_joint 1.732777e-05

Joint ci ratio: 4.277033e-01	ci left: 1.377274e-05	ci right 2.143558e-05	k: 83	n:4800000
Cons ci ratio: 6.874781e-05	ci left: 9.984913e-01	ci right 9.985602e-01	k: 4792925	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
CCDC15   4800000 perm   9592 sec   (500 perm/sec)   p_kst 2.083333e-07   p_cons 9.985260e-01   p_joint 1.729167e-05

Joint ci ratio: 4.277033e-01	ci left: 1.374411e-05	ci right 2.139101e-05	k: 83	n:4810000
Cons ci ratio: 6.864361e-05	ci left: 9.984928e-01	ci right 9.985615e-01	k: 4802917	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
CCDC15   4810000 perm   9630 sec   (499 perm/sec)   p_kst 2.079002e-07   p_cons 9.985274e-01   p_joint 1.725572e-05

Joint ci ratio: 4.277033e-01	ci left: 1.371559e-05	ci right 2.134663e-05	k: 83	n:4820000
Cons ci ratio: 6.859302e-05	ci left: 9.984919e-01	ci right 9.985606e-01	k: 4812898	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
CCDC15   4820000 perm   9668 sec   (499 perm/sec)   p_kst 2.074689e-07   p_cons 9.985266e-01   p_joint 1.721992e-05

Joint ci ratio: 4.277033e-01	ci left: 1.368719e-05	ci right 2.130244e-05	k: 83	n:4830000
Cons ci ratio: 6.850396e-05	ci left: 9.984927e-01	ci right 9.985613e-01	k: 4822887	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
CCDC15   4830000 perm   9705 sec   (498 perm/sec)   p_kst 2.070393e-07   p_cons 9.985273e-01   p_joint 1.718427e-05

Joint ci ratio: 4.277033e-01	ci left: 1.365891e-05	ci right 2.125842e-05	k: 83	n:4840000
Cons ci ratio: 6.842966e-05	ci left: 9.984929e-01	ci right 9.985614e-01	k: 4832873	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
CCDC15   4840000 perm   9744 sec   (497 perm/sec)   p_kst 2.066116e-07   p_cons 9.985275e-01   p_joint 1.714876e-05

Joint ci ratio: 4.277033e-01	ci left: 1.363075e-05	ci right 2.121459e-05	k: 83	n:4850000
Cons ci ratio: 6.835559e-05	ci left: 9.984931e-01	ci right 9.985616e-01	k: 4842859	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
CCDC15   4850000 perm   9782 sec   (496 perm/sec)   p_kst 2.061856e-07   p_cons 9.985276e-01   p_joint 1.711340e-05

Joint ci ratio: 4.277033e-01	ci left: 1.360270e-05	ci right 2.117094e-05	k: 83	n:4860000
Cons ci ratio: 6.830565e-05	ci left: 9.984922e-01	ci right 9.985607e-01	k: 4852840	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
CCDC15   4860000 perm   9821 sec   (495 perm/sec)   p_kst 2.057613e-07   p_cons 9.985267e-01   p_joint 1.707819e-05

Joint ci ratio: 4.277033e-01	ci left: 1.357477e-05	ci right 2.112747e-05	k: 83	n:4870000
Cons ci ratio: 6.824627e-05	ci left: 9.984918e-01	ci right 9.985602e-01	k: 4862823	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
CCDC15   4870000 perm   9860 sec   (494 perm/sec)   p_kst 2.053388e-07   p_cons 9.985263e-01   p_joint 1.704312e-05

Joint ci ratio: 4.277033e-01	ci left: 1.354696e-05	ci right 2.108418e-05	k: 83	n:4880000
Cons ci ratio: 6.815856e-05	ci left: 9.984926e-01	ci right 9.985609e-01	k: 4872812	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
CCDC15   4880000 perm   9900 sec   (493 perm/sec)   p_kst 2.049180e-07   p_cons 9.985270e-01   p_joint 1.700820e-05

Joint ci ratio: 4.277033e-01	ci left: 1.351925e-05	ci right 2.104106e-05	k: 83	n:4890000
Cons ci ratio: 6.809483e-05	ci left: 9.984924e-01	ci right 9.985606e-01	k: 4882796	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
CCDC15   4890000 perm   9939 sec   (492 perm/sec)   p_kst 2.044990e-07   p_cons 9.985268e-01   p_joint 1.697342e-05

Joint ci ratio: 4.277034e-01	ci left: 1.349166e-05	ci right 2.099812e-05	k: 83	n:4900000
Cons ci ratio: 6.801241e-05	ci left: 9.984930e-01	ci right 9.985611e-01	k: 4892784	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
CCDC15   4900000 perm   9978 sec   (491 perm/sec)   p_kst 2.040816e-07   p_cons 9.985273e-01   p_joint 1.693878e-05

Joint ci ratio: 4.277034e-01	ci left: 1.346418e-05	ci right 2.095535e-05	k: 83	n:4910000
Cons ci ratio: 6.794910e-05	ci left: 9.984928e-01	ci right 9.985608e-01	k: 4902768	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
CCDC15   4910000 perm   10017 sec   (490 perm/sec)   p_kst 2.036660e-07   p_cons 9.985271e-01   p_joint 1.690428e-05

Joint ci ratio: 4.277034e-01	ci left: 1.343682e-05	ci right 2.091276e-05	k: 83	n:4920000
Cons ci ratio: 6.785782e-05	ci left: 9.984938e-01	ci right 9.985617e-01	k: 4912758	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
CCDC15   4920000 perm   10056 sec   (489 perm/sec)   p_kst 2.032520e-07   p_cons 9.985280e-01   p_joint 1.686992e-05

Joint ci ratio: 4.277034e-01	ci left: 1.340956e-05	ci right 2.087034e-05	k: 83	n:4930000
Cons ci ratio: 6.776220e-05	ci left: 9.984950e-01	ci right 9.985628e-01	k: 4922749	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
CCDC15   4930000 perm   10095 sec   (488 perm/sec)   p_kst 2.028398e-07   p_cons 9.985292e-01   p_joint 1.683570e-05

Joint ci ratio: 4.277034e-01	ci left: 1.338242e-05	ci right 2.082809e-05	k: 83	n:4940000
Cons ci ratio: 6.770892e-05	ci left: 9.984943e-01	ci right 9.985622e-01	k: 4932731	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
CCDC15   4940000 perm   10133 sec   (488 perm/sec)   p_kst 2.024291e-07   p_cons 9.985285e-01   p_joint 1.680162e-05

Joint ci ratio: 4.277034e-01	ci left: 1.335538e-05	ci right 2.078602e-05	k: 83	n:4950000
Cons ci ratio: 6.766970e-05	ci left: 9.984931e-01	ci right 9.985609e-01	k: 4942710	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
CCDC15   4950000 perm   10172 sec   (487 perm/sec)   p_kst 2.020202e-07   p_cons 9.985273e-01   p_joint 1.676768e-05

Joint ci ratio: 4.277034e-01	ci left: 1.332846e-05	ci right 2.074411e-05	k: 83	n:4960000
Cons ci ratio: 6.757954e-05	ci left: 9.984941e-01	ci right 9.985618e-01	k: 4952700	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
CCDC15   4960000 perm   10210 sec   (486 perm/sec)   p_kst 2.016129e-07   p_cons 9.985282e-01   p_joint 1.673387e-05

Joint ci ratio: 4.277034e-01	ci left: 1.330164e-05	ci right 2.070237e-05	k: 83	n:4970000
Cons ci ratio: 6.749433e-05	ci left: 9.984949e-01	ci right 9.985625e-01	k: 4962689	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
CCDC15   4970000 perm   10249 sec   (485 perm/sec)   p_kst 2.012072e-07   p_cons 9.985290e-01   p_joint 1.670020e-05

Joint ci ratio: 4.251800e-01	ci left: 1.345418e-05	ci right 2.088303e-05	k: 84	n:4980000
Cons ci ratio: 6.742785e-05	ci left: 9.984949e-01	ci right 9.985624e-01	k: 4972674	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
CCDC15   4980000 perm   10288 sec   (484 perm/sec)   p_kst 2.008032e-07   p_cons 9.985289e-01   p_joint 1.686747e-05

Joint ci ratio: 4.251800e-01	ci left: 1.342721e-05	ci right 2.084118e-05	k: 84	n:4990000
Cons ci ratio: 6.733860e-05	ci left: 9.984959e-01	ci right 9.985633e-01	k: 4982664	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
CCDC15   4990000 perm   10326 sec   (483 perm/sec)   p_kst 2.004008e-07   p_cons 9.985299e-01   p_joint 1.683367e-05

Joint ci ratio: 4.251800e-01	ci left: 1.340036e-05	ci right 2.079950e-05	k: 84	n:5000000
Cons ci ratio: 6.724509e-05	ci left: 9.984970e-01	ci right 9.985644e-01	k: 4992655	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
CCDC15   5000000 perm   10365 sec   (482 perm/sec)   p_kst 2.000000e-07   p_cons 9.985310e-01   p_joint 1.680000e-05

Outputting figure to mutsig2_images.part000000000031/CCDC15.5_2916_5000000_2e-07_0.99853_1.68e-05.png
                gene_name: CCDC15
               theta_stop: 2.8 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1.68e-05 
     ci_joint_bounds_left: 1.34e-05 
    ci_joint_bounds_right: 2.08e-05 

Current progress: 20 percent done.
CCDC39
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.903404e-02	ci left: 2.968763e-01	ci right 3.150368e-01	k: 3059	n:10000
Cons ci ratio: 4.145358e-02	ci left: 4.621749e-01	ci right 4.818414e-01	k: 4720	n:10000
KS ci ratio: 7.461446e-02	ci left: 2.081653e-01	ci right 2.244003e-01	k: 2162	n:10000
CCDC39   10000 perm   2 sec   (5557 perm/sec)   p_kst 2.162000e-01   p_cons 4.720000e-01   p_joint 3.059000e-01

Outputting figure to mutsig2_images.part000000000031/CCDC39.3_2906_10000_0.2162_0.472_0.3059.png
                gene_name: CCDC39
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.22 
                   p_cons: 0.47 
      ci_cons_bounds_left: 0.46 
     ci_cons_bounds_right: 0.48 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.32 

Current progress: 40 percent done.
CCDC129
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.122226e-02	ci left: 6.021669e-01	ci right 6.213680e-01	k: 6118	n:10000
Cons ci ratio: 3.070545e-02	ci left: 6.101014e-01	ci right 6.292288e-01	k: 6197	n:10000
KS ci ratio: 5.610910e-02	ci left: 3.187002e-01	ci right 3.372001e-01	k: 3279	n:10000
CCDC129   10000 perm   2 sec   (5801 perm/sec)   p_kst 3.279000e-01   p_cons 6.197000e-01   p_joint 6.118000e-01

Outputting figure to mutsig2_images.part000000000031/CCDC129.2_3187_10000_0.3279_0.6197_0.6118.png
                gene_name: CCDC129
               theta_stop: 0.056 
                    nperm: 10000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.62 
      ci_cons_bounds_left: 0.61 
     ci_cons_bounds_right: 0.63 
                  p_joint: 0.61 
     ci_joint_bounds_left: 0.60 
    ci_joint_bounds_right: 0.62 

Current progress: 60 percent done.
CCDC157
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.029257e-01	ci left: 2.024975e-03	ci right 4.279939e-03	k: 30	n:10000
Cons ci ratio: 5.169162e-03	ci left: 9.802710e-01	ci right 9.854422e-01	k: 9830	n:10000
KS ci ratio: 1.181215e+00	ci left: 4.796397e-04	ci right 1.838264e-03	k: 10	n:10000
CCDC157   10000 perm   2 sec   (6503 perm/sec)   p_kst 1.000000e-03   p_cons 9.830000e-01   p_joint 3.000000e-03

Joint ci ratio: 5.711043e-01	ci left: 1.684366e-03	ci right 3.066699e-03	k: 46	n:20000
Cons ci ratio: 4.044313e-03	ci left: 9.771260e-01	ci right 9.811330e-01	k: 19584	n:20000
KS ci ratio: 8.168860e-01	ci left: 6.894885e-04	ci right 1.664942e-03	k: 22	n:20000
CCDC157   20000 perm   3 sec   (5780 perm/sec)   p_kst 1.100000e-03   p_cons 9.792000e-01   p_joint 2.300000e-03

Joint ci ratio: 4.296732e-01	ci left: 2.174473e-03	ci right 3.391668e-03	k: 82	n:30000
Cons ci ratio: 3.254814e-03	ci left: 9.781095e-01	ci right 9.813300e-01	k: 29393	n:30000
KS ci ratio: 5.973559e-01	ci left: 1.009177e-03	ci right 1.891927e-03	k: 42	n:30000
CCDC157   30000 perm   5 sec   (5480 perm/sec)   p_kst 1.400000e-03   p_cons 9.797667e-01   p_joint 2.733333e-03

Joint ci ratio: 3.529063e-01	ci left: 2.533465e-03	ci right 3.640626e-03	k: 122	n:40000
Cons ci ratio: 2.828260e-03	ci left: 9.781927e-01	ci right 9.809871e-01	k: 39185	n:40000
KS ci ratio: 4.974483e-01	ci left: 1.166699e-03	ci right 1.958501e-03	k: 61	n:40000
CCDC157   40000 perm   8 sec   (5291 perm/sec)   p_kst 1.525000e-03   p_cons 9.796250e-01   p_joint 3.050000e-03

Joint ci ratio: 3.273345e-01	ci left: 2.392621e-03	ci right 3.346552e-03	k: 142	n:50000
Cons ci ratio: 2.562424e-03	ci left: 9.778080e-01	ci right 9.803360e-01	k: 48955	n:50000
KS ci ratio: 4.616391e-01	ci left: 1.109193e-03	ci right 1.790804e-03	k: 71	n:50000
CCDC157   50000 perm   10 sec   (5140 perm/sec)   p_kst 1.420000e-03   p_cons 9.791000e-01   p_joint 2.840000e-03

Joint ci ratio: 2.893301e-01	ci left: 2.609169e-03	ci right 3.506634e-03	k: 182	n:60000
Cons ci ratio: 2.342796e-03	ci left: 9.778552e-01	ci right 9.801649e-01	k: 58742	n:60000
KS ci ratio: 4.128908e-01	ci left: 1.191403e-03	ci right 1.825057e-03	k: 89	n:60000
CCDC157   60000 perm   12 sec   (5018 perm/sec)   p_kst 1.483333e-03   p_cons 9.790333e-01   p_joint 3.033333e-03

Joint ci ratio: 2.700977e-01	ci left: 2.595116e-03	ci right 3.418367e-03	k: 209	n:70000
Cons ci ratio: 2.171407e-03	ci left: 9.778960e-01	ci right 9.800355e-01	k: 68529	n:70000
KS ci ratio: 3.840992e-01	ci left: 1.201182e-03	ci right 1.784256e-03	k: 103	n:70000
CCDC157   70000 perm   14 sec   (4907 perm/sec)   p_kst 1.471429e-03   p_cons 9.789857e-01   p_joint 2.985714e-03

Joint ci ratio: 2.297713e-01	ci left: 3.208600e-03	ci right 4.053027e-03	k: 289	n:80000
Cons ci ratio: 2.018009e-03	ci left: 9.782384e-01	ci right 9.802266e-01	k: 78340	n:80000
KS ci ratio: 3.575747e-01	ci left: 1.232420e-03	ci right 1.779755e-03	k: 119	n:80000
CCDC157   80000 perm   17 sec   (4803 perm/sec)   p_kst 1.487500e-03   p_cons 9.792500e-01   p_joint 3.612500e-03

Joint ci ratio: 2.177217e-01	ci left: 3.198215e-03	ci right 3.989867e-03	k: 322	n:90000
Cons ci ratio: 1.899157e-03	ci left: 9.783714e-01	ci right 9.802420e-01	k: 88139	n:90000
KS ci ratio: 3.322314e-01	ci left: 1.288339e-03	ci right 1.811301e-03	k: 138	n:90000
CCDC157   90000 perm   19 sec   (4704 perm/sec)   p_kst 1.533333e-03   p_cons 9.793222e-01   p_joint 3.577778e-03

Joint ci ratio: 2.056564e-01	ci left: 3.247740e-03	ci right 4.001502e-03	k: 361	n:100000
Cons ci ratio: 1.801308e-03	ci left: 9.784291e-01	ci right 9.802029e-01	k: 97933	n:100000
KS ci ratio: 3.187625e-01	ci left: 1.269702e-03	ci right 1.759943e-03	k: 150	n:100000
CCDC157   100000 perm   22 sec   (4614 perm/sec)   p_kst 1.500000e-03   p_cons 9.793300e-01   p_joint 3.610000e-03

Joint ci ratio: 2.167858e-01	ci left: 2.642426e-03	ci right 3.293309e-03	k: 325	n:110000
Cons ci ratio: 1.715247e-03	ci left: 9.785248e-01	ci right 9.802135e-01	k: 107732	n:110000
KS ci ratio: 3.040200e-01	ci left: 1.279989e-03	ci right 1.746928e-03	k: 165	n:110000
CCDC157   110000 perm   24 sec   (4529 perm/sec)   p_kst 1.500000e-03   p_cons 9.793818e-01   p_joint 2.954545e-03

Joint ci ratio: 2.040297e-01	ci left: 2.753812e-03	ci right 3.387247e-03	k: 367	n:120000
Cons ci ratio: 1.642135e-03	ci left: 9.785635e-01	ci right 9.801799e-01	k: 117526	n:120000
KS ci ratio: 2.841603e-01	ci left: 1.358593e-03	ci right 1.816036e-03	k: 189	n:120000
CCDC157   120000 perm   27 sec   (4448 perm/sec)   p_kst 1.575000e-03   p_cons 9.793833e-01   p_joint 3.058333e-03

Joint ci ratio: 1.969360e-01	ci left: 2.739247e-03	ci right 3.344795e-03	k: 394	n:130000
Cons ci ratio: 1.577039e-03	ci left: 9.786132e-01	ci right 9.801653e-01	k: 127322	n:130000
KS ci ratio: 2.729018e-01	ci left: 1.368571e-03	ci right 1.807988e-03	k: 205	n:130000
CCDC157   130000 perm   30 sec   (4367 perm/sec)   p_kst 1.576923e-03   p_cons 9.794000e-01   p_joint 3.030769e-03

Joint ci ratio: 1.880910e-01	ci left: 2.801947e-03	ci right 3.390360e-03	k: 432	n:140000
Cons ci ratio: 1.518847e-03	ci left: 9.786642e-01	ci right 9.801587e-01	k: 137119	n:140000
KS ci ratio: 2.617055e-01	ci left: 1.390777e-03	ci right 1.816007e-03	k: 223	n:140000
CCDC157   140000 perm   33 sec   (4289 perm/sec)   p_kst 1.592857e-03   p_cons 9.794214e-01   p_joint 3.085714e-03

Joint ci ratio: 1.815031e-01	ci left: 2.818619e-03	ci right 3.387523e-03	k: 464	n:150000
Cons ci ratio: 1.469321e-03	ci left: 9.786346e-01	ci right 9.800801e-01	k: 146905	n:150000
KS ci ratio: 2.533608e-01	ci left: 1.391606e-03	ci right 1.801380e-03	k: 238	n:150000
CCDC157   150000 perm   36 sec   (4215 perm/sec)   p_kst 1.586667e-03   p_cons 9.793667e-01   p_joint 3.093333e-03

Joint ci ratio: 1.746829e-01	ci left: 2.863405e-03	ci right 3.417341e-03	k: 501	n:160000
Cons ci ratio: 1.423238e-03	ci left: 9.786413e-01	ci right 9.800412e-01	k: 156696	n:160000
KS ci ratio: 2.424432e-01	ci left: 1.433596e-03	ci right 1.834810e-03	k: 260	n:160000
CCDC157   160000 perm   39 sec   (4146 perm/sec)   p_kst 1.625000e-03   p_cons 9.793500e-01   p_joint 3.131250e-03

Joint ci ratio: 1.692090e-01	ci left: 2.880737e-03	ci right 3.418781e-03	k: 534	n:170000
Cons ci ratio: 1.376611e-03	ci left: 9.787853e-01	ci right 9.801394e-01	k: 166510	n:170000
KS ci ratio: 2.370579e-01	ci left: 1.415613e-03	ci right 1.801703e-03	k: 272	n:170000
CCDC157   170000 perm   42 sec   (4079 perm/sec)   p_kst 1.600000e-03   p_cons 9.794706e-01   p_joint 3.141176e-03

Joint ci ratio: 1.653919e-01	ci left: 2.853766e-03	ci right 3.373552e-03	k: 559	n:180000
Cons ci ratio: 1.338869e-03	ci left: 9.787728e-01	ci right 9.800895e-01	k: 176299	n:180000
KS ci ratio: 2.312051e-01	ci left: 1.410184e-03	ci right 1.783941e-03	k: 286	n:180000
CCDC157   180000 perm   45 sec   (4019 perm/sec)   p_kst 1.588889e-03   p_cons 9.794389e-01   p_joint 3.105556e-03

Joint ci ratio: 1.603170e-01	ci left: 2.885324e-03	ci right 3.393180e-03	k: 595	n:190000
Cons ci ratio: 1.303047e-03	ci left: 9.787941e-01	ci right 9.800755e-01	k: 186094	n:190000
KS ci ratio: 2.265204e-01	ci left: 1.395500e-03	ci right 1.756823e-03	k: 298	n:190000
CCDC157   190000 perm   48 sec   (3959 perm/sec)   p_kst 1.568421e-03   p_cons 9.794421e-01   p_joint 3.131579e-03

Joint ci ratio: 1.561789e-01	ci left: 2.894724e-03	ci right 3.389851e-03	k: 627	n:200000
Cons ci ratio: 1.273104e-03	ci left: 9.787122e-01	ci right 9.799639e-01	k: 195869	n:200000
KS ci ratio: 2.213975e-01	ci left: 1.391798e-03	ci right 1.742903e-03	k: 312	n:200000
CCDC157   200000 perm   51 sec   (3902 perm/sec)   p_kst 1.560000e-03   p_cons 9.793450e-01   p_joint 3.135000e-03

Joint ci ratio: 1.514276e-01	ci left: 2.940031e-03	ci right 3.426223e-03	k: 667	n:210000
Cons ci ratio: 1.246715e-03	ci left: 9.785854e-01	ci right 9.798108e-01	k: 205633	n:210000
KS ci ratio: 2.146438e-01	ci left: 1.415562e-03	ci right 1.760335e-03	k: 332	n:210000
CCDC157   210000 perm   55 sec   (3845 perm/sec)   p_kst 1.580952e-03   p_cons 9.792048e-01   p_joint 3.176190e-03

Joint ci ratio: 1.469809e-01	ci left: 2.985806e-03	ci right 3.463795e-03	k: 708	n:220000
Cons ci ratio: 1.223342e-03	ci left: 9.784199e-01	ci right 9.796220e-01	k: 215386	n:220000
KS ci ratio: 2.084726e-01	ci left: 1.437313e-03	ci right 1.776035e-03	k: 352	n:220000
CCDC157   220000 perm   58 sec   (3791 perm/sec)   p_kst 1.600000e-03   p_cons 9.790273e-01   p_joint 3.218182e-03

Joint ci ratio: 1.443598e-01	ci left: 2.964909e-03	ci right 3.430359e-03	k: 734	n:230000
Cons ci ratio: 1.193946e-03	ci left: 9.785204e-01	ci right 9.796936e-01	k: 225196	n:230000
KS ci ratio: 2.061534e-01	ci left: 1.407796e-03	ci right 1.735405e-03	k: 360	n:230000
CCDC157   230000 perm   62 sec   (3739 perm/sec)   p_kst 1.565217e-03   p_cons 9.791130e-01   p_joint 3.191304e-03

Joint ci ratio: 1.415944e-01	ci left: 2.957881e-03	ci right 3.412581e-03	k: 763	n:240000
Cons ci ratio: 1.170246e-03	ci left: 9.784818e-01	ci right 9.796316e-01	k: 234975	n:240000
KS ci ratio: 2.019997e-01	ci left: 1.408444e-03	ci right 1.728786e-03	k: 375	n:240000
CCDC157   240000 perm   65 sec   (3688 perm/sec)   p_kst 1.562500e-03   p_cons 9.790625e-01   p_joint 3.179167e-03

Joint ci ratio: 1.411410e-01	ci left: 2.858848e-03	ci right 3.296798e-03	k: 768	n:250000
Cons ci ratio: 1.144317e-03	ci left: 9.785762e-01	ci right 9.797006e-01	k: 244786	n:250000
KS ci ratio: 1.991101e-01	ci left: 1.393896e-03	ci right 1.705843e-03	k: 386	n:250000
CCDC157   250000 perm   69 sec   (3625 perm/sec)   p_kst 1.544000e-03   p_cons 9.791440e-01   p_joint 3.072000e-03

Joint ci ratio: 1.385531e-01	ci left: 2.856528e-03	ci right 3.285437e-03	k: 797	n:260000
Cons ci ratio: 1.123511e-03	ci left: 9.785351e-01	ci right 9.796388e-01	k: 254564	n:260000
KS ci ratio: 1.951173e-01	ci left: 1.398787e-03	ci right 1.704805e-03	k: 402	n:260000
CCDC157   260000 perm   73 sec   (3562 perm/sec)   p_kst 1.546154e-03   p_cons 9.790923e-01   p_joint 3.065385e-03

Joint ci ratio: 1.363509e-01	ci left: 2.843714e-03	ci right 3.263361e-03	k: 823	n:270000
Cons ci ratio: 1.102099e-03	ci left: 9.785609e-01	ci right 9.796436e-01	k: 264359	n:270000
KS ci ratio: 1.918146e-01	ci left: 1.396320e-03	ci right 1.696024e-03	k: 416	n:270000
CCDC157   270000 perm   77 sec   (3502 perm/sec)   p_kst 1.540741e-03   p_cons 9.791074e-01   p_joint 3.048148e-03

Joint ci ratio: 1.339347e-01	ci left: 2.845674e-03	ci right 3.257576e-03	k: 853	n:280000
Cons ci ratio: 1.080920e-03	ci left: 9.786212e-01	ci right 9.796831e-01	k: 274164	n:280000
KS ci ratio: 1.882371e-01	ci left: 1.400876e-03	ci right 1.695310e-03	k: 432	n:280000
CCDC157   280000 perm   81 sec   (3458 perm/sec)   p_kst 1.542857e-03   p_cons 9.791571e-01   p_joint 3.046429e-03

Joint ci ratio: 1.313448e-01	ci left: 2.860900e-03	ci right 3.266373e-03	k: 887	n:290000
Cons ci ratio: 1.062079e-03	ci left: 9.786322e-01	ci right 9.796755e-01	k: 283956	n:290000
KS ci ratio: 1.846468e-01	ci left: 1.408456e-03	ci right 1.698204e-03	k: 449	n:290000
CCDC157   290000 perm   85 sec   (3415 perm/sec)   p_kst 1.548276e-03   p_cons 9.791586e-01   p_joint 3.058621e-03

Joint ci ratio: 1.286897e-01	ci left: 2.884861e-03	ci right 3.284834e-03	k: 924	n:300000
Cons ci ratio: 9.639150e-04	ci left: 9.817070e-01	ci right 9.826570e-01	k: 294656	n:300000
KS ci ratio: 1.814491e-01	ci left: 1.412397e-03	ci right 1.697371e-03	k: 465	n:300000
CCDC157   300000 perm   89 sec   (3374 perm/sec)   p_kst 1.550000e-03   p_cons 9.821867e-01   p_joint 3.080000e-03

Joint ci ratio: 1.244496e-01	ci left: 2.991727e-03	ci right 3.391843e-03	k: 988	n:310000
Cons ci ratio: 9.477891e-04	ci left: 9.817317e-01	ci right 9.826657e-01	k: 304483	n:310000
KS ci ratio: 1.782269e-01	ci left: 1.419206e-03	ci right 1.699921e-03	k: 482	n:310000
CCDC157   310000 perm   93 sec   (3333 perm/sec)   p_kst 1.554839e-03   p_cons 9.822032e-01   p_joint 3.187097e-03

Joint ci ratio: 1.225440e-01	ci left: 2.992118e-03	ci right 3.385714e-03	k: 1019	n:320000
Cons ci ratio: 9.331961e-04	ci left: 9.817264e-01	ci right 9.826461e-01	k: 314301	n:320000
KS ci ratio: 1.749953e-01	ci left: 1.428620e-03	ci right 1.705532e-03	k: 500	n:320000
CCDC157   320000 perm   97 sec   (3294 perm/sec)   p_kst 1.562500e-03   p_cons 9.821906e-01   p_joint 3.184375e-03

Joint ci ratio: 1.204936e-01	ci left: 3.004285e-03	ci right 3.392399e-03	k: 1054	n:330000
Cons ci ratio: 9.186198e-04	ci left: 9.817462e-01	ci right 9.826514e-01	k: 324127	n:330000
KS ci ratio: 1.714377e-01	ci left: 1.446208e-03	ci right 1.720240e-03	k: 521	n:330000
CCDC157   330000 perm   101 sec   (3255 perm/sec)   p_kst 1.578788e-03   p_cons 9.822030e-01   p_joint 3.193939e-03

Joint ci ratio: 1.182168e-01	ci left: 3.032915e-03	ci right 3.416806e-03	k: 1095	n:340000
Cons ci ratio: 9.053146e-04	ci left: 9.817410e-01	ci right 9.826331e-01	k: 333945	n:340000
KS ci ratio: 1.680887e-01	ci left: 1.462814e-03	ci right 1.734030e-03	k: 542	n:340000
CCDC157   340000 perm   106 sec   (3217 perm/sec)   p_kst 1.594118e-03   p_cons 9.821912e-01   p_joint 3.220588e-03

Joint ci ratio: 1.169971e-01	ci left: 3.010039e-03	ci right 3.386832e-03	k: 1118	n:350000
Cons ci ratio: 8.922065e-04	ci left: 9.817507e-01	ci right 9.826298e-01	k: 343768	n:350000
KS ci ratio: 1.670177e-01	ci left: 1.440179e-03	ci right 1.705326e-03	k: 549	n:350000
CCDC157   350000 perm   110 sec   (3174 perm/sec)   p_kst 1.568571e-03   p_cons 9.821943e-01   p_joint 3.194286e-03

Joint ci ratio: 1.152087e-01	ci left: 3.020827e-03	ci right 3.392797e-03	k: 1153	n:360000
Cons ci ratio: 8.793723e-04	ci left: 9.817712e-01	ci right 9.826377e-01	k: 353595	n:360000
KS ci ratio: 1.643495e-01	ci left: 1.448101e-03	ci right 1.710026e-03	k: 567	n:360000
CCDC157   360000 perm   115 sec   (3138 perm/sec)   p_kst 1.575000e-03   p_cons 9.822083e-01   p_joint 3.202778e-03

Joint ci ratio: 1.135479e-01	ci left: 3.028446e-03	ci right 3.395618e-03	k: 1187	n:370000
Cons ci ratio: 8.670760e-04	ci left: 9.817907e-01	ci right 9.826450e-01	k: 363422	n:370000
KS ci ratio: 1.627819e-01	ci left: 1.437475e-03	ci right 1.694756e-03	k: 578	n:370000
CCDC157   370000 perm   119 sec   (3102 perm/sec)   p_kst 1.562162e-03   p_cons 9.822216e-01   p_joint 3.208108e-03

Joint ci ratio: 1.120028e-01	ci left: 3.033143e-03	ci right 3.395550e-03	k: 1220	n:380000
Cons ci ratio: 8.561834e-04	ci left: 9.817719e-01	ci right 9.826154e-01	k: 373235	n:380000
KS ci ratio: 1.603086e-01	ci left: 1.445101e-03	ci right 1.699438e-03	k: 596	n:380000
CCDC157   380000 perm   124 sec   (3066 perm/sec)   p_kst 1.568421e-03   p_cons 9.821974e-01   p_joint 3.210526e-03

Joint ci ratio: 1.108299e-01	ci left: 3.020178e-03	ci right 3.377010e-03	k: 1246	n:390000
Cons ci ratio: 8.458754e-04	ci left: 9.817464e-01	ci right 9.825797e-01	k: 383045	n:390000
KS ci ratio: 1.593788e-01	ci left: 1.425277e-03	ci right 1.674531e-03	k: 603	n:390000
CCDC157   390000 perm   129 sec   (3033 perm/sec)   p_kst 1.546154e-03   p_cons 9.821667e-01   p_joint 3.194872e-03

Joint ci ratio: 1.092634e-01	ci left: 3.032197e-03	ci right 3.385060e-03	k: 1282	n:400000
Cons ci ratio: 8.368811e-04	ci left: 9.816818e-01	ci right 9.825062e-01	k: 392839	n:400000
KS ci ratio: 1.576913e-01	ci left: 1.420855e-03	ci right 1.666456e-03	k: 616	n:400000
CCDC157   400000 perm   133 sec   (2998 perm/sec)   p_kst 1.540000e-03   p_cons 9.820975e-01   p_joint 3.205000e-03

Joint ci ratio: 1.076796e-01	ci left: 3.048411e-03	ci right 3.397693e-03	k: 1320	n:410000
Cons ci ratio: 8.276408e-04	ci left: 9.816427e-01	ci right 9.824578e-01	k: 402642	n:410000
KS ci ratio: 1.549517e-01	ci left: 1.437761e-03	ci right 1.681565e-03	k: 638	n:410000
CCDC157   410000 perm   139 sec   (2955 perm/sec)   p_kst 1.556098e-03   p_cons 9.820537e-01   p_joint 3.219512e-03

Joint ci ratio: 1.067156e-01	ci left: 3.031439e-03	ci right 3.375471e-03	k: 1344	n:420000
Cons ci ratio: 8.191365e-04	ci left: 9.815862e-01	ci right 9.823929e-01	k: 412437	n:420000
KS ci ratio: 1.537543e-01	ci left: 1.426418e-03	ci right 1.666257e-03	k: 648	n:420000
CCDC157   420000 perm   144 sec   (2921 perm/sec)   p_kst 1.542857e-03   p_cons 9.819929e-01   p_joint 3.200000e-03

Joint ci ratio: 1.055068e-01	ci left: 3.031120e-03	ci right 3.370978e-03	k: 1375	n:430000
Cons ci ratio: 8.092845e-04	ci left: 9.816029e-01	ci right 9.823999e-01	k: 422262	n:430000
KS ci ratio: 1.517791e-01	ci left: 1.431269e-03	ci right 1.668552e-03	k: 665	n:430000
CCDC157   430000 perm   149 sec   (2890 perm/sec)   p_kst 1.546512e-03   p_cons 9.820047e-01   p_joint 3.197674e-03

Joint ci ratio: 1.039681e-01	ci left: 3.052974e-03	ci right 3.389984e-03	k: 1416	n:440000
Cons ci ratio: 7.999851e-04	ci left: 9.816097e-01	ci right 9.823975e-01	k: 432083	n:440000
KS ci ratio: 1.498780e-01	ci left: 1.435919e-03	ci right 1.670723e-03	k: 682	n:440000
CCDC157   440000 perm   154 sec   (2859 perm/sec)   p_kst 1.550000e-03   p_cons 9.820068e-01   p_joint 3.218182e-03

Joint ci ratio: 1.027781e-01	ci left: 3.056567e-03	ci right 3.389880e-03	k: 1449	n:450000
Cons ci ratio: 7.903024e-04	ci left: 9.816477e-01	ci right 9.824260e-01	k: 441918	n:450000
KS ci ratio: 1.484721e-01	ci left: 1.431820e-03	ci right 1.663563e-03	k: 695	n:450000
CCDC157   450000 perm   159 sec   (2829 perm/sec)   p_kst 1.544444e-03   p_cons 9.820400e-01   p_joint 3.220000e-03

Joint ci ratio: 1.017659e-01	ci left: 3.051551e-03	ci right 3.380843e-03	k: 1478	n:460000
Cons ci ratio: 7.816351e-04	ci left: 9.816534e-01	ci right 9.824231e-01	k: 451739	n:460000
KS ci ratio: 1.473133e-01	ci left: 1.423721e-03	ci right 1.652196e-03	k: 706	n:460000
CCDC157   460000 perm   164 sec   (2800 perm/sec)   p_kst 1.534783e-03   p_cons 9.820413e-01   p_joint 3.213043e-03

Joint ci ratio: 1.005158e-01	ci left: 3.063357e-03	ci right 3.389623e-03	k: 1515	n:470000
Cons ci ratio: 7.744120e-04	ci left: 9.816051e-01	ci right 9.823677e-01	k: 461535	n:470000
KS ci ratio: 1.459777e-01	ci left: 1.420074e-03	ci right 1.645717e-03	k: 719	n:470000
CCDC157   470000 perm   170 sec   (2772 perm/sec)   p_kst 1.529787e-03   p_cons 9.819894e-01   p_joint 3.223404e-03

Joint ci ratio: 9.950376e-02	ci left: 3.062505e-03	ci right 3.385204e-03	k: 1546	n:480000
Cons ci ratio: 7.665678e-04	ci left: 9.815968e-01	ci right 9.823516e-01	k: 471349	n:480000
KS ci ratio: 1.447767e-01	ci left: 1.414579e-03	ci right 1.637341e-03	k: 731	n:480000
CCDC157   480000 perm   175 sec   (2745 perm/sec)   p_kst 1.522917e-03   p_cons 9.819771e-01   p_joint 3.220833e-03

Joint ci ratio: 9.799351e-02	ci left: 3.095547e-03	ci right 3.416493e-03	k: 1594	n:490000
Cons ci ratio: 7.589132e-04	ci left: 9.815909e-01	ci right 9.823381e-01	k: 481164	n:490000
KS ci ratio: 1.423646e-01	ci left: 1.434899e-03	ci right 1.656776e-03	k: 756	n:490000
CCDC157   490000 perm   180 sec   (2718 perm/sec)   p_kst 1.542857e-03   p_cons 9.819673e-01   p_joint 3.253061e-03

Joint ci ratio: 9.711497e-02	ci left: 3.090221e-03	ci right 3.407578e-03	k: 1623	n:500000
Cons ci ratio: 7.511438e-04	ci left: 9.816014e-01	ci right 9.823410e-01	k: 490987	n:500000
KS ci ratio: 1.416193e-01	ci left: 1.421632e-03	ci right 1.640209e-03	k: 764	n:500000
CCDC157   500000 perm   186 sec   (2691 perm/sec)   p_kst 1.528000e-03   p_cons 9.819740e-01   p_joint 3.246000e-03

Joint ci ratio: 8.997736e-02	ci left: 3.540963e-03	ci right 3.876479e-03	k: 1890	n:510000
Cons ci ratio: 7.436906e-04	ci left: 9.816076e-01	ci right 9.823398e-01	k: 500808	n:510000
KS ci ratio: 1.401610e-01	ci left: 1.424024e-03	ci right 1.640526e-03	k: 780	n:510000
CCDC157   510000 perm   191 sec   (2664 perm/sec)   p_kst 1.529412e-03   p_cons 9.819765e-01   p_joint 3.705882e-03

Joint ci ratio: 8.936606e-02	ci left: 3.521744e-03	ci right 3.853054e-03	k: 1916	n:520000
Cons ci ratio: 7.370548e-04	ci left: 9.815845e-01	ci right 9.823101e-01	k: 510614	n:520000
KS ci ratio: 1.390092e-01	ci left: 1.420765e-03	ci right 1.634850e-03	k: 793	n:520000
CCDC157   520000 perm   197 sec   (2637 perm/sec)   p_kst 1.525000e-03   p_cons 9.819500e-01   p_joint 3.684615e-03

Joint ci ratio: 8.837982e-02	ci left: 3.534626e-03	ci right 3.863289e-03	k: 1959	n:530000
Cons ci ratio: 7.293485e-04	ci left: 9.816232e-01	ci right 9.823413e-01	k: 520452	n:530000
KS ci ratio: 1.372902e-01	ci left: 1.430390e-03	ci right 1.643043e-03	k: 813	n:530000
CCDC157   530000 perm   203 sec   (2611 perm/sec)   p_kst 1.533962e-03   p_cons 9.819849e-01   p_joint 3.696226e-03

Joint ci ratio: 8.564137e-02	ci left: 3.699252e-03	ci right 4.032032e-03	k: 2086	n:540000
Cons ci ratio: 7.221034e-04	ci left: 9.816494e-01	ci right 9.823603e-01	k: 530284	n:540000
KS ci ratio: 1.358785e-01	ci left: 1.434308e-03	ci right 1.645172e-03	k: 830	n:540000
CCDC157   540000 perm   209 sec   (2586 perm/sec)   p_kst 1.537037e-03   p_cons 9.820074e-01   p_joint 3.862963e-03

Joint ci ratio: 8.499277e-02	ci left: 3.688932e-03	ci right 4.018146e-03	k: 2118	n:550000
Cons ci ratio: 7.157317e-04	ci left: 9.816415e-01	ci right 9.823461e-01	k: 540098	n:550000
KS ci ratio: 1.349886e-01	ci left: 1.427551e-03	ci right 1.635938e-03	k: 841	n:550000
CCDC157   550000 perm   215 sec   (2562 perm/sec)   p_kst 1.529091e-03   p_cons 9.819964e-01   p_joint 3.850909e-03

Joint ci ratio: 8.756305e-02	ci left: 3.409879e-03	ci right 3.723862e-03	k: 1996	n:560000
Cons ci ratio: 7.092747e-04	ci left: 9.816466e-01	ci right 9.823448e-01	k: 549919	n:560000
KS ci ratio: 1.341159e-01	ci left: 1.421041e-03	ci right 1.627029e-03	k: 852	n:560000
CCDC157   560000 perm   221 sec   (2539 perm/sec)   p_kst 1.521429e-03   p_cons 9.819982e-01   p_joint 3.564286e-03

Joint ci ratio: 8.343221e-02	ci left: 3.696892e-03	ci right 4.020463e-03	k: 2198	n:570000
Cons ci ratio: 7.028150e-04	ci left: 9.816604e-01	ci right 9.823523e-01	k: 559745	n:570000
KS ci ratio: 1.324942e-01	ci left: 1.431724e-03	ci right 1.636554e-03	k: 873	n:570000
CCDC157   570000 perm   227 sec   (2516 perm/sec)   p_kst 1.531579e-03   p_cons 9.820088e-01   p_joint 3.856140e-03

Joint ci ratio: 8.456182e-02	ci left: 3.535241e-03	ci right 3.849059e-03	k: 2140	n:580000
Cons ci ratio: 6.967663e-04	ci left: 9.816615e-01	ci right 9.823474e-01	k: 569564	n:580000
KS ci ratio: 1.317432e-01	ci left: 1.423710e-03	ci right 1.626149e-03	k: 883	n:580000
CCDC157   580000 perm   233 sec   (2493 perm/sec)   p_kst 1.522414e-03   p_cons 9.820069e-01   p_joint 3.689655e-03

Joint ci ratio: 8.540938e-02	ci left: 3.405638e-03	ci right 3.711133e-03	k: 2098	n:590000
Cons ci ratio: 6.899430e-04	ci left: 9.817106e-01	ci right 9.823898e-01	k: 579411	n:590000
KS ci ratio: 1.308584e-01	ci left: 1.419250e-03	ci right 1.619594e-03	k: 895	n:590000
CCDC157   590000 perm   239 sec   (2471 perm/sec)   p_kst 1.516949e-03   p_cons 9.820525e-01   p_joint 3.555932e-03

Joint ci ratio: 8.464643e-02	ci left: 3.410865e-03	ci right 3.713960e-03	k: 2136	n:600000
Cons ci ratio: 6.845092e-04	ci left: 9.816957e-01	ci right 9.823696e-01	k: 589221	n:600000
KS ci ratio: 1.294922e-01	ci left: 1.426232e-03	ci right 1.625298e-03	k: 914	n:600000
CCDC157   600000 perm   245 sec   (2449 perm/sec)   p_kst 1.523333e-03   p_cons 9.820350e-01   p_joint 3.560000e-03

Joint ci ratio: 8.398111e-02	ci left: 3.409511e-03	ci right 3.709988e-03	k: 2170	n:610000
Cons ci ratio: 6.789173e-04	ci left: 9.816963e-01	ci right 9.823647e-01	k: 599040	n:610000
KS ci ratio: 1.282368e-01	ci left: 1.431408e-03	ci right 1.629112e-03	k: 932	n:610000
CCDC157   610000 perm   252 sec   (2425 perm/sec)   p_kst 1.527869e-03   p_cons 9.820328e-01   p_joint 3.557377e-03

Joint ci ratio: 8.346429e-02	ci left: 3.397155e-03	ci right 3.694611e-03	k: 2197	n:620000
Cons ci ratio: 6.731525e-04	ci left: 9.817132e-01	ci right 9.823758e-01	k: 608869	n:620000
KS ci ratio: 1.272855e-01	ci left: 1.430180e-03	ci right 1.626138e-03	k: 946	n:620000
CCDC157   620000 perm   258 sec   (2401 perm/sec)   p_kst 1.525806e-03   p_cons 9.820468e-01   p_joint 3.543548e-03

Joint ci ratio: 8.273329e-02	ci left: 3.403850e-03	ci right 3.699156e-03	k: 2236	n:630000
Cons ci ratio: 6.683131e-04	ci left: 9.816879e-01	ci right 9.823458e-01	k: 618672	n:630000
KS ci ratio: 1.261580e-01	ci left: 1.433608e-03	ci right 1.628165e-03	k: 963	n:630000
CCDC157   630000 perm   265 sec   (2380 perm/sec)   p_kst 1.528571e-03   p_cons 9.820190e-01   p_joint 3.549206e-03

Joint ci ratio: 8.211174e-02	ci left: 3.402695e-03	ci right 3.695577e-03	k: 2270	n:640000
Cons ci ratio: 6.624602e-04	ci left: 9.817233e-01	ci right 9.823754e-01	k: 628513	n:640000
KS ci ratio: 1.251878e-01	ci left: 1.433908e-03	ci right 1.626899e-03	k: 978	n:640000
CCDC157   640000 perm   271 sec   (2358 perm/sec)   p_kst 1.528125e-03   p_cons 9.820516e-01   p_joint 3.546875e-03

Joint ci ratio: 8.136241e-02	ci left: 3.413641e-03	ci right 3.704657e-03	k: 2312	n:650000
Cons ci ratio: 6.577891e-04	ci left: 9.817018e-01	ci right 9.823493e-01	k: 638318	n:650000
KS ci ratio: 1.241147e-01	ci left: 1.437186e-03	ci right 1.628839e-03	k: 995	n:650000
CCDC157   650000 perm   278 sec   (2338 perm/sec)   p_kst 1.530769e-03   p_cons 9.820277e-01   p_joint 3.556923e-03

Joint ci ratio: 8.065042e-02	ci left: 3.422783e-03	ci right 3.711904e-03	k: 2353	n:660000
Cons ci ratio: 6.528783e-04	ci left: 9.816993e-01	ci right 9.823419e-01	k: 648135	n:660000
KS ci ratio: 1.228866e-01	ci left: 1.444778e-03	ci right 1.635398e-03	k: 1015	n:660000
CCDC157   660000 perm   285 sec   (2318 perm/sec)   p_kst 1.537879e-03   p_cons 9.820227e-01   p_joint 3.565152e-03

Joint ci ratio: 8.007432e-02	ci left: 3.421423e-03	ci right 3.708269e-03	k: 2387	n:670000
Cons ci ratio: 6.484317e-04	ci left: 9.816773e-01	ci right 9.823155e-01	k: 657939	n:670000
KS ci ratio: 1.218710e-01	ci left: 1.447811e-03	ci right 1.637138e-03	k: 1032	n:670000
CCDC157   670000 perm   292 sec   (2298 perm/sec)   p_kst 1.540299e-03   p_cons 9.819985e-01   p_joint 3.562687e-03

Joint ci ratio: 7.955985e-02	ci left: 3.415786e-03	ci right 3.700234e-03	k: 2418	n:680000
Cons ci ratio: 6.438862e-04	ci left: 9.816664e-01	ci right 9.823001e-01	k: 667750	n:680000
KS ci ratio: 1.211116e-01	ci left: 1.445056e-03	ci right 1.632761e-03	k: 1045	n:680000
CCDC157   680000 perm   298 sec   (2279 perm/sec)   p_kst 1.536765e-03   p_cons 9.819853e-01   p_joint 3.555882e-03

Joint ci ratio: 8.280184e-02	ci left: 3.103586e-03	ci right 3.373075e-03	k: 2233	n:690000
Cons ci ratio: 6.392515e-04	ci left: 9.816660e-01	ci right 9.822952e-01	k: 677568	n:690000
KS ci ratio: 1.202524e-01	ci left: 1.445196e-03	ci right 1.631493e-03	k: 1060	n:690000
CCDC157   690000 perm   306 sec   (2258 perm/sec)   p_kst 1.536232e-03   p_cons 9.819826e-01   p_joint 3.236232e-03

Joint ci ratio: 8.201565e-02	ci left: 3.119413e-03	ci right 3.387582e-03	k: 2276	n:700000
Cons ci ratio: 6.349204e-04	ci left: 9.816541e-01	ci right 9.822790e-01	k: 687378	n:700000
KS ci ratio: 1.187500e-01	ci left: 1.461970e-03	ci right 1.647909e-03	k: 1087	n:700000
CCDC157   700000 perm   313 sec   (2237 perm/sec)   p_kst 1.552857e-03   p_cons 9.819686e-01   p_joint 3.251429e-03

Joint ci ratio: 8.156952e-02	ci left: 3.109968e-03	ci right 3.375801e-03	k: 2301	n:710000
Cons ci ratio: 6.307008e-04	ci left: 9.816412e-01	ci right 9.822619e-01	k: 697187	n:710000
KS ci ratio: 1.182084e-01	ci left: 1.455045e-03	ci right 1.639201e-03	k: 1097	n:710000
CCDC157   710000 perm   320 sec   (2216 perm/sec)   p_kst 1.545070e-03   p_cons 9.819535e-01   p_joint 3.240845e-03

Joint ci ratio: 7.720182e-02	ci left: 3.430272e-03	ci right 3.707079e-03	k: 2568	n:720000
Cons ci ratio: 6.267600e-04	ci left: 9.816174e-01	ci right 9.822342e-01	k: 706988	n:720000
KS ci ratio: 1.174621e-01	ci left: 1.453708e-03	ci right 1.636452e-03	k: 1111	n:720000
CCDC157   720000 perm   328 sec   (2197 perm/sec)   p_kst 1.543056e-03   p_cons 9.819278e-01   p_joint 3.566667e-03

Joint ci ratio: 7.647523e-02	ci left: 3.449117e-03	ci right 3.724709e-03	k: 2617	n:730000
Cons ci ratio: 6.223867e-04	ci left: 9.816233e-01	ci right 9.822358e-01	k: 716810	n:730000
KS ci ratio: 1.163166e-01	ci left: 1.463050e-03	ci right 1.645052e-03	k: 1133	n:730000
CCDC157   730000 perm   335 sec   (2176 perm/sec)   p_kst 1.552055e-03   p_cons 9.819315e-01   p_joint 3.584932e-03

Joint ci ratio: 7.594042e-02	ci left: 3.451554e-03	ci right 3.725327e-03	k: 2654	n:740000
Cons ci ratio: 6.177739e-04	ci left: 9.816482e-01	ci right 9.822561e-01	k: 726646	n:740000
KS ci ratio: 1.155549e-01	ci left: 1.462962e-03	ci right 1.643679e-03	k: 1148	n:740000
CCDC157   740000 perm   343 sec   (2158 perm/sec)   p_kst 1.551351e-03   p_cons 9.819541e-01   p_joint 3.586486e-03

Joint ci ratio: 7.529048e-02	ci left: 3.465708e-03	ci right 3.738148e-03	k: 2700	n:750000
Cons ci ratio: 6.137461e-04	ci left: 9.816441e-01	ci right 9.822481e-01	k: 736461	n:750000
KS ci ratio: 1.142198e-01	ci left: 1.478422e-03	ci right 1.658797e-03	k: 1175	n:750000
CCDC157   750000 perm   350 sec   (2142 perm/sec)   p_kst 1.566667e-03   p_cons 9.819480e-01   p_joint 3.600000e-03

Joint ci ratio: 7.467058e-02	ci left: 3.478208e-03	ci right 3.749282e-03	k: 2745	n:760000
Cons ci ratio: 6.097960e-04	ci left: 9.816402e-01	ci right 9.822403e-01	k: 746276	n:760000
KS ci ratio: 1.130712e-01	ci left: 1.489650e-03	ci right 1.669446e-03	k: 1199	n:760000
CCDC157   760000 perm   358 sec   (2125 perm/sec)   p_kst 1.577632e-03   p_cons 9.819421e-01   p_joint 3.611842e-03

Joint ci ratio: 7.414577e-02	ci left: 3.482743e-03	ci right 3.752181e-03	k: 2784	n:770000
Cons ci ratio: 6.057880e-04	ci left: 9.816443e-01	ci right 9.822404e-01	k: 756097	n:770000
KS ci ratio: 1.124639e-01	ci left: 1.486711e-03	ci right 1.665124e-03	k: 1212	n:770000
CCDC157   770000 perm   365 sec   (2108 perm/sec)   p_kst 1.574026e-03   p_cons 9.819442e-01   p_joint 3.615584e-03

Joint ci ratio: 7.367115e-02	ci left: 3.483394e-03	ci right 3.751083e-03	k: 2820	n:780000
Cons ci ratio: 6.017710e-04	ci left: 9.816534e-01	ci right 9.822456e-01	k: 765922	n:780000
KS ci ratio: 1.120494e-01	ci left: 1.478865e-03	ci right 1.655639e-03	k: 1221	n:780000
CCDC157   780000 perm   373 sec   (2092 perm/sec)   p_kst 1.565385e-03   p_cons 9.819513e-01   p_joint 3.615385e-03

Joint ci ratio: 7.681017e-02	ci left: 3.159826e-03	ci right 3.413458e-03	k: 2595	n:790000
Cons ci ratio: 5.979609e-04	ci left: 9.816547e-01	ci right 9.822431e-01	k: 775741	n:790000
KS ci ratio: 1.112780e-01	ci left: 1.481063e-03	ci right 1.656801e-03	k: 1238	n:790000
CCDC157   790000 perm   381 sec   (2076 perm/sec)   p_kst 1.567089e-03   p_cons 9.819506e-01   p_joint 3.284810e-03

Joint ci ratio: 7.269822e-02	ci left: 3.489571e-03	ci right 3.754043e-03	k: 2896	n:800000
Cons ci ratio: 5.945156e-04	ci left: 9.816383e-01	ci right 9.822233e-01	k: 785546	n:800000
KS ci ratio: 1.105223e-01	ci left: 1.483210e-03	ci right 1.657930e-03	k: 1255	n:800000
CCDC157   800000 perm   388 sec   (2060 perm/sec)   p_kst 1.568750e-03   p_cons 9.819325e-01   p_joint 3.620000e-03

Joint ci ratio: 7.225070e-02	ci left: 3.490129e-03	ci right 3.752947e-03	k: 2932	n:810000
Cons ci ratio: 5.911285e-04	ci left: 9.816223e-01	ci right 9.822039e-01	k: 795351	n:810000
KS ci ratio: 1.098682e-01	ci left: 1.482907e-03	ci right 1.656491e-03	k: 1270	n:810000
CCDC157   810000 perm   396 sec   (2045 perm/sec)   p_kst 1.567901e-03   p_cons 9.819148e-01   p_joint 3.619753e-03

Joint ci ratio: 7.062738e-02	ci left: 3.610465e-03	ci right 3.875986e-03	k: 3068	n:820000
Cons ci ratio: 5.873543e-04	ci left: 9.816337e-01	ci right 9.822117e-01	k: 805178	n:820000
KS ci ratio: 1.092256e-01	ci left: 1.482615e-03	ci right 1.655083e-03	k: 1285	n:820000
CCDC157   820000 perm   404 sec   (2030 perm/sec)   p_kst 1.567073e-03   p_cons 9.819244e-01   p_joint 3.741463e-03

Joint ci ratio: 7.017146e-02	ci left: 3.614310e-03	ci right 3.878328e-03	k: 3108	n:830000
Cons ci ratio: 5.834334e-04	ci left: 9.816583e-01	ci right 9.822323e-01	k: 815016	n:830000
KS ci ratio: 1.083442e-01	ci left: 1.489365e-03	ci right 1.661132e-03	k: 1306	n:830000
CCDC157   830000 perm   412 sec   (2016 perm/sec)   p_kst 1.573494e-03   p_cons 9.819470e-01   p_joint 3.744578e-03

Joint ci ratio: 6.830191e-02	ci left: 3.772510e-03	ci right 4.040452e-03	k: 3280	n:840000
Cons ci ratio: 5.804652e-04	ci left: 9.816282e-01	ci right 9.821994e-01	k: 824809	n:840000
KS ci ratio: 1.076057e-01	ci left: 1.492484e-03	ci right 1.663363e-03	k: 1324	n:840000
CCDC157   840000 perm   420 sec   (2001 perm/sec)   p_kst 1.576190e-03   p_cons 9.819155e-01   p_joint 3.904762e-03

Joint ci ratio: 6.800245e-02	ci left: 3.761663e-03	ci right 4.027617e-03	k: 3309	n:850000
Cons ci ratio: 5.775019e-04	ci left: 9.816013e-01	ci right 9.821695e-01	k: 834604	n:850000
KS ci ratio: 1.070417e-01	ci left: 1.490954e-03	ci right 1.660707e-03	k: 1338	n:850000
CCDC157   850000 perm   428 sec   (1987 perm/sec)   p_kst 1.574118e-03   p_cons 9.818871e-01   p_joint 3.892941e-03

Joint ci ratio: 6.902679e-02	ci left: 3.607055e-03	ci right 3.866073e-03	k: 3212	n:860000
Cons ci ratio: 5.742820e-04	ci left: 9.815938e-01	ci right 9.821588e-01	k: 844415	n:860000
KS ci ratio: 1.066051e-01	ci left: 1.486066e-03	ci right 1.654529e-03	k: 1349	n:860000
CCDC157   860000 perm   436 sec   (1972 perm/sec)   p_kst 1.568605e-03   p_cons 9.818779e-01   p_joint 3.734884e-03

Joint ci ratio: 6.863276e-02	ci left: 3.607391e-03	ci right 3.864896e-03	k: 3249	n:870000
Cons ci ratio: 5.708571e-04	ci left: 9.816026e-01	ci right 9.821643e-01	k: 854240	n:870000
KS ci ratio: 1.062519e-01	ci left: 1.479054e-03	ci right 1.646132e-03	k: 1358	n:870000
CCDC157   870000 perm   444 sec   (1958 perm/sec)   p_kst 1.560920e-03   p_cons 9.818851e-01   p_joint 3.734483e-03

Joint ci ratio: 6.827668e-02	ci left: 3.604373e-03	ci right 3.860274e-03	k: 3283	n:880000
Cons ci ratio: 5.675289e-04	ci left: 9.816090e-01	ci right 9.821674e-01	k: 864063	n:880000
KS ci ratio: 1.057861e-01	ci left: 1.475521e-03	ci right 1.641424e-03	k: 1370	n:880000
CCDC157   880000 perm   453 sec   (1945 perm/sec)   p_kst 1.556818e-03   p_cons 9.818898e-01   p_joint 3.730682e-03

Joint ci ratio: 6.782357e-02	ci left: 3.612472e-03	ci right 3.867179e-03	k: 3327	n:890000
Cons ci ratio: 5.641690e-04	ci left: 9.816209e-01	ci right 9.821760e-01	k: 873891	n:890000
KS ci ratio: 1.049848e-01	ci left: 1.481916e-03	ci right 1.647198e-03	k: 1391	n:890000
CCDC157   890000 perm   461 sec   (1931 perm/sec)   p_kst 1.562921e-03   p_cons 9.819000e-01   p_joint 3.738202e-03

Joint ci ratio: 6.740947e-02	ci left: 3.617119e-03	ci right 3.870536e-03	k: 3368	n:900000
Cons ci ratio: 5.609381e-04	ci left: 9.816281e-01	ci right 9.821799e-01	k: 883715	n:900000
KS ci ratio: 1.044237e-01	ci left: 1.481681e-03	ci right 1.645998e-03	k: 1406	n:900000
CCDC157   900000 perm   469 sec   (1917 perm/sec)   p_kst 1.562222e-03   p_cons 9.819056e-01   p_joint 3.742222e-03

Joint ci ratio: 6.706212e-02	ci left: 3.615185e-03	ci right 3.867111e-03	k: 3403	n:910000
Cons ci ratio: 5.580380e-04	ci left: 9.816174e-01	ci right 9.821664e-01	k: 893523	n:910000
KS ci ratio: 1.038349e-01	ci left: 1.482523e-03	ci right 1.645951e-03	k: 1422	n:910000
CCDC157   910000 perm   478 sec   (1904 perm/sec)   p_kst 1.562637e-03   p_cons 9.818934e-01   p_joint 3.739560e-03

Joint ci ratio: 6.682744e-02	ci left: 3.601539e-03	ci right 3.851602e-03	k: 3427	n:920000
Cons ci ratio: 5.546053e-04	ci left: 9.816441e-01	ci right 9.821898e-01	k: 903365	n:920000
KS ci ratio: 1.034362e-01	ci left: 1.478055e-03	ci right 1.640326e-03	k: 1433	n:920000
CCDC157   920000 perm   487 sec   (1891 perm/sec)   p_kst 1.557609e-03   p_cons 9.819185e-01   p_joint 3.725000e-03

Joint ci ratio: 6.650823e-02	ci left: 3.597705e-03	ci right 3.846262e-03	k: 3460	n:930000
Cons ci ratio: 5.516685e-04	ci left: 9.816422e-01	ci right 9.821849e-01	k: 913181	n:930000
KS ci ratio: 1.029706e-01	ci left: 1.475780e-03	ci right 1.637028e-03	k: 1446	n:930000
CCDC157   930000 perm   496 sec   (1877 perm/sec)   p_kst 1.554839e-03   p_cons 9.819151e-01   p_joint 3.720430e-03

Joint ci ratio: 6.611763e-02	ci left: 3.602326e-03	ci right 3.849684e-03	k: 3501	n:940000
Cons ci ratio: 5.485478e-04	ci left: 9.816553e-01	ci right 9.821949e-01	k: 923011	n:940000
KS ci ratio: 1.022312e-01	ci left: 1.481847e-03	ci right 1.642526e-03	k: 1467	n:940000
CCDC157   940000 perm   504 sec   (1864 perm/sec)   p_kst 1.560638e-03   p_cons 9.819266e-01   p_joint 3.724468e-03

Joint ci ratio: 6.561311e-02	ci left: 3.620313e-03	ci right 3.866938e-03	k: 3555	n:950000
Cons ci ratio: 5.455277e-04	ci left: 9.816649e-01	ci right 9.822016e-01	k: 932838	n:950000
KS ci ratio: 1.015074e-01	ci left: 1.487791e-03	ci right 1.647904e-03	k: 1488	n:950000
CCDC157   950000 perm   513 sec   (1852 perm/sec)   p_kst 1.566316e-03   p_cons 9.819347e-01   p_joint 3.742105e-03

Joint ci ratio: 6.519251e-02	ci left: 3.629735e-03	ci right 3.875357e-03	k: 3601	n:960000
Cons ci ratio: 5.430029e-04	ci left: 9.816450e-01	ci right 9.821792e-01	k: 942637	n:960000
KS ci ratio: 1.008323e-01	ci left: 1.492600e-03	ci right 1.652099e-03	k: 1508	n:960000
CCDC157   960000 perm   522 sec   (1839 perm/sec)   p_kst 1.570833e-03   p_cons 9.819135e-01   p_joint 3.751042e-03

Joint ci ratio: 6.484237e-02	ci left: 3.631868e-03	ci right 3.876265e-03	k: 3640	n:970000
Cons ci ratio: 5.401987e-04	ci left: 9.816462e-01	ci right 9.821777e-01	k: 952456	n:970000
KS ci ratio: 1.003679e-01	ci left: 1.491282e-03	ci right 1.649863e-03	k: 1522	n:970000
CCDC157   970000 perm   531 sec   (1827 perm/sec)   p_kst 1.569072e-03   p_cons 9.819134e-01   p_joint 3.752577e-03

Joint ci ratio: 6.457713e-02	ci left: 3.624925e-03	ci right 3.867819e-03	k: 3670	n:980000
Cons ci ratio: 5.375455e-04	ci left: 9.816403e-01	ci right 9.821691e-01	k: 962268	n:980000
KS ci ratio: 9.990980e-02	ci left: 1.489993e-03	ci right 1.647671e-03	k: 1536	n:980000
CCDC157   980000 perm   540 sec   (1815 perm/sec)   p_kst 1.567347e-03   p_cons 9.819061e-01   p_joint 3.744898e-03

Outputting figure to mutsig2_images.part000000000031/CCDC157.2_2299_980000_0.0015673_0.98191_0.0037449.png
                gene_name: CCDC157
               theta_stop: 0.100 
                    nperm: 980000 
                     p_ks: 0.0016 
        ci_ks_bounds_left: 0.0015 
       ci_ks_bounds_right: 0.0016 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.0037 
     ci_joint_bounds_left: 0.0036 
    ci_joint_bounds_right: 0.0039 

Current progress: 80 percent done.
CCDC19
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.703560e-03	ci left: 9.833923e-01	ci right 9.881185e-01	k: 9859	n:10000
Cons ci ratio: 1.262330e-02	ci left: 9.002141e-01	ci right 9.117481e-01	k: 9061	n:10000
KS ci ratio: 7.724826e-03	ci left: 9.587987e-01	ci right 9.663288e-01	k: 9627	n:10000
CCDC19   10000 perm   1 sec   (6848 perm/sec)   p_kst 9.627000e-01   p_cons 9.061000e-01   p_joint 9.859000e-01

Outputting figure to mutsig2_images.part000000000031/CCDC19.2_1704_10000_0.9627_0.9061_0.9859.png
                gene_name: CCDC19
               theta_stop: 0.013 
                    nperm: 10000 
                     p_ks: 0.96 
        ci_ks_bounds_left: 0.96 
       ci_ks_bounds_right: 0.97 
                   p_cons: 0.91 
      ci_cons_bounds_left: 0.90 
     ci_cons_bounds_right: 0.91 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000031
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 31 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1642>
Subject: Job 8704140: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1642>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000032> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:22 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000032.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000032.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 32  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000032.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    153.74 sec.
    Max Memory :      6055 MB
    Max Swap   :      9037 MB

    Max Processes  :         7
    Max Threads    :        91

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
32
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 32
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 32: processing genes 2805 - 2895
Calculating significance of each gene.
Using projection method.
2805	CCDC62	1.264182e-01
2806	CCDC63	1
2807	CCDC64	1
2808	CCDC64B	1
2809	CCDC65	1
2810	CCDC66	1.644323e-01
2811	CCDC67	1.520030e-01
2812	CCDC68	1
2813	CCDC69	1
2814	CCDC7	1
2815	CCDC70	1
2816	CCDC71	1
2817	CCDC72	1
2818	CCDC73	1
2819	CCDC74A	1
2820	CCDC74B	1
2821	CCDC75	1
2822	CCDC76	1
2823	CCDC77	1
2824	CCDC78	1
2825	CCDC8	1
2826	CCDC80	3.390670e-01
2827	CCDC81	1
2828	CCDC82	1
2829	CCDC83	1
2830	CCDC84	1
2831	CCDC85A	1
2832	CCDC86	1
2833	CCDC87	1
2834	CCDC88A	2.038412e-01
2835	CCDC88B	1
2836	CCDC88C	1
2837	CCDC89	3.117874e-02
2838	CCDC9	1
2839	CCDC90A	1
2840	CCDC90B	1
2841	CCDC91	1
2842	CCDC92	1
2843	CCDC93	1
2844	CCDC94	1
2845	CCDC96	1.389438e-01
2846	CCDC97	1
2847	CCDC99	1
2848	CCHCR1	1
2849	CCIN	1
2850	CCK	1
2851	CCKAR	1
2852	CCKBR	1
2853	CCL1	1
2854	CCL11	1
2855	CCL13	1
2856	CCL14	1
2857	CCL15	1
2858	CCL16	1
2859	CCL17	1
2860	CCL18	1
2861	CCL19	1
2862	CCL2	1
2863	CCL20	1
2864	CCL21	1
2865	CCL22	1
2866	CCL23	4.874861e-02
2867	CCL24	4.119818e-02
2868	CCL25	1
2869	CCL26	1
2870	CCL27	1
2871	CCL28	1
2872	CCL3	1
2873	CCL4	1
2874	CCL5	1
2875	CCL7	1
2876	CCL8	1
2877	CCM2	1
2878	CCNA1	1
2879	CCNA2	1
2880	CCNB1	1
2881	CCNB1IP1	1
2882	CCNB2	1
2883	CCNB3	1
2884	CCNC	1
2885	CCND1	1
2886	CCND2	1
2887	CCND3	1
2888	CCNDBP1	1
2889	CCNE1	1
2890	CCNE2	1
2891	CCNF	1
2892	CCNG1	1
2893	CCNG2	1
2894	CCNH	1
2895	CCNI	1
Done

Running MutSig 2:
Scatter job 32: processing genes 2805 - 2895
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000032
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 32 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1706>
Subject: Job 8704142: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1706>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000033> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:30 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000033.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000033.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 33  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000033.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    157.08 sec.
    Max Memory :      5711 MB
    Max Swap   :      8390 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
33
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 33
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 33: processing genes 2896 - 2985
Calculating significance of each gene.
Using projection method.
2896	CCNI2	1
2897	CCNJ	1.597782e-01
2898	CCNJL	1
2899	CCNK	1
2900	CCNL1	1
2901	CCNL2	1
2902	CCNO	1
2903	CCNT1	3.904767e-03
2904	CCNT2	1
2905	CCNY	1
2906	CCNYL1	1
2907	CCPG1	2.988438e-01
2908	CCR1	1
2909	CCR10	1
2910	CCR2	1
2911	CCR3	1
2912	CCR4	1
2913	CCR5	1
2914	CCR6	1
2915	CCR7	1
2916	CCR8	1
2917	CCR9	1
2918	CCRL1	1.128742e-01
2919	CCRL2	1
2920	CCRN4L	1
2921	CCS	1
2922	CCT2	2.295405e-01
2923	CCT3	1
2924	CCT4	1
2925	CCT5	1
2926	CCT6A	1
2927	CCT6B	1
2928	CCT7	1
2929	CCT8	1
2930	CCT8L2	1
2931	CD101	1
2932	CD109	1.775134e-01
2933	CD14	1
2934	CD151	1
2935	CD160	1
2936	CD163	2.757028e-02
2937	CD163L1	4.844184e-01
2938	CD164	1
2939	CD164L2	1
2940	CD177	1
2941	CD180	1
2942	CD19	1
2943	CD1A	1
2944	CD1B	1
2945	CD1C	1
2946	CD1D	1
2947	CD1E	1
2948	CD2	1
2949	CD200	1
2950	CD200R1	6.062953e-02
2951	CD200R1L	1
2952	CD207	1.423750e-01
2953	CD209	9.301393e-04
2954	CD22	1
2955	CD226	1
2956	CD244	1
2957	CD247	1
2958	CD248	2.152823e-01
2959	CD27	1
2960	CD274	1
2961	CD276	1
2962	CD28	5.463339e-02
2963	CD2AP	1
2964	CD2BP2	1
2965	CD300A	1
2966	CD300C	1
2967	CD300E	1
2968	CD300LB	1
2969	CD300LD	1
2970	CD300LF	7.361378e-02
2971	CD300LG	1
2972	CD302	1
2973	CD320	1
2974	CD33	1
2975	CD34	1
2976	CD36	1
2977	CD37	1
2978	CD38	1.398118e-01
2979	CD3D	8.908277e-03
2980	CD3E	1
2981	CD3EAP	1
2982	CD3G	1
2983	CD4	1.528446e-01
2984	CD40	1
2985	CD40LG	4.626951e-02
Done

Running MutSig 2:
Scatter job 33: processing genes 2896 - 2985
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CD209
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.964445e-02	ci left: 1.871758e-01	ci right 2.028023e-01	k: 1949	n:10000
Cons ci ratio: 4.356693e-02	ci left: 4.375213e-01	ci right 4.571094e-01	k: 4473	n:10000
KS ci ratio: 1.597330e-01	ci left: 5.224686e-02	ci right 6.141345e-02	k: 567	n:10000
CD209   10000 perm   2 sec   (5598 perm/sec)   p_kst 5.670000e-02   p_cons 4.473000e-01   p_joint 1.949000e-01

Joint ci ratio: 5.053805e-02	ci left: 2.253714e-01	ci right 2.371068e-01	k: 4624	n:20000
Cons ci ratio: 3.087774e-02	ci left: 4.392940e-01	ci right 4.531217e-01	k: 8924	n:20000
KS ci ratio: 1.110964e-01	ci left: 5.533552e-02	ci right 6.189353e-02	k: 1171	n:20000
CD209   20000 perm   6 sec   (3267 perm/sec)   p_kst 5.855000e-02   p_cons 4.462000e-01   p_joint 2.312000e-01

Joint ci ratio: 4.962121e-02	ci left: 1.679099e-01	ci right 1.764870e-01	k: 5165	n:30000
Cons ci ratio: 2.523951e-02	ci left: 4.400311e-01	ci right 4.513128e-01	k: 13370	n:30000
KS ci ratio: 9.013996e-02	ci left: 5.662084e-02	ci right 6.199823e-02	k: 1778	n:30000
CD209   30000 perm   8 sec   (3587 perm/sec)   p_kst 5.926667e-02   p_cons 4.456667e-01   p_joint 1.721667e-01

Outputting figure to mutsig2_images.part000000000033/CD209.4_1243_30000_0.059267_0.44567_0.17217.png
                gene_name: CD209
               theta_stop: 0.090 
                    nperm: 30000 
                     p_ks: 0.059 
        ci_ks_bounds_left: 0.057 
       ci_ks_bounds_right: 0.062 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.17 
     ci_joint_bounds_left: 0.17 
    ci_joint_bounds_right: 0.18 

Current progress: 33 percent done.
CCNT1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.983582e-02	ci left: 2.912258e-01	ci right 3.092906e-01	k: 3002	n:10000
Cons ci ratio: 3.219686e-02	ci left: 5.874096e-01	ci right 6.067338e-01	k: 5971	n:10000
KS ci ratio: 1.061000e-01	ci left: 1.136922e-01	ci right 1.265300e-01	k: 1200	n:10000
CCNT1   10000 perm   2 sec   (6058 perm/sec)   p_kst 1.200000e-01   p_cons 5.971000e-01   p_joint 3.002000e-01

Joint ci ratio: 5.219941e-02	ci left: 2.141759e-01	ci right 2.257056e-01	k: 4398	n:20000
Cons ci ratio: 2.380219e-02	ci left: 5.686645e-01	ci right 5.824136e-01	k: 11511	n:20000
KS ci ratio: 7.234636e-02	ci left: 1.233499e-01	ci right 1.326585e-01	k: 2559	n:20000
CCNT1   20000 perm   4 sec   (5386 perm/sec)   p_kst 1.279500e-01   p_cons 5.755500e-01   p_joint 2.199000e-01

Outputting figure to mutsig2_images.part000000000033/CCNT1.3_2217_20000_0.12795_0.57555_0.2199.png
                gene_name: CCNT1
               theta_stop: 0.072 
                    nperm: 20000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.23 

Current progress: 67 percent done.
CD163
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.174386e-02	ci left: 5.942350e-01	ci right 6.135045e-01	k: 6039	n:10000
Cons ci ratio: 5.364460e-02	ci left: 3.386594e-01	ci right 3.574292e-01	k: 3480	n:10000
KS ci ratio: 4.255064e-02	ci left: 4.491963e-01	ci right 4.688276e-01	k: 4590	n:10000
CD163   10000 perm   2 sec   (5498 perm/sec)   p_kst 4.590000e-01   p_cons 3.480000e-01   p_joint 6.039000e-01

Outputting figure to mutsig2_images.part000000000033/CD163.2_3535_10000_0.459_0.348_0.6039.png
                gene_name: CD163
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.60 
     ci_joint_bounds_left: 0.59 
    ci_joint_bounds_right: 0.61 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000033
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 33 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1650>
Subject: Job 8704144: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1650>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000034> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:42 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000034.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000034.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 34  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000034.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    169.49 sec.
    Max Memory :      5492 MB
    Max Swap   :      8310 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
34
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 34
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 34: processing genes 2986 - 3076
Calculating significance of each gene.
Using projection method.
2986	CD44	1.579665e-01
2987	CD46	1.400418e-01
2988	CD47	1
2989	CD48	1
2990	CD5	1.769893e-01
2991	CD52	1
2992	CD53	1
2993	CD55	1
2994	CD58	1
2995	CD59	1
2996	CD5L	1
2997	CD6	1
2998	CD63	1
2999	CD68	1
3000/18093 3000	CD69	1
3001	CD7	1
3002	CD70	1
3003	CD72	1
3004	CD74	1.228852e-01
3005	CD79A	1
3006	CD79B	1
3007	CD80	1
3008	CD81	1
3009	CD82	1
3010	CD83	1
3011	CD84	1
3012	CD86	1
3013	CD8A	1
3014	CD8B	1
3015	CD9	1
3016	CD93	1
3017	CD96	1
3018	CD97	1
3019	CD99	1
3020	CD99L2	8.029076e-03
3021	CDA	1
3022	CDADC1	1
3023	CDAN1	1
3024	CDC123	1
3025	CDC14A	1
3026	CDC14B	1
3027	CDC16	1
3028	CDC20	1
3029	CDC20B	1
3030	CDC23	1
3031	CDC25A	1
3032	CDC25B	1
3033	CDC25C	1
3034	CDC26	1
3035	CDC27	2.434796e-01
3036	CDC34	1
3037	CDC37	1
3038	CDC37L1	1
3039	CDC40	1.292880e-01
3040	CDC42	1.015832e-01
3041	CDC42BPA	1
3042	CDC42BPB	1
3043	CDC42BPG	1
3044	CDC42EP1	1
3045	CDC42EP2	1
3046	CDC42EP3	1
3047	CDC42EP4	1.372898e-02
3048	CDC42SE1	1
3049	CDC42SE2	1
3050	CDC45	1
3051	CDC5L	1.609505e-01
3052	CDC6	4.405610e-02
In gene CDC7 the following bins exceed PROBCAP:
    THCA-DJ-A3UV-TP	categ 6	N = 1768    n = 1	mu =   1.01e-07
3053	CDC7	9.013625e-02
3054	CDC73	1
3055	CDCA2	1.329294e-01
3056	CDCA3	2.945376e-02
3057	CDCA4	1
3058	CDCA5	1
3059	CDCA7	1
3060	CDCA7L	1
3061	CDCA8	1
3062	CDCP1	1
3063	CDCP2	1
3064	CDH1	1
3065	CDH10	1
3066	CDH11	2.753599e-01
3067	CDH12	1.962801e-03
3068	CDH13	1.909217e-01
3069	CDH15	1
3070	CDH16	1
3071	CDH17	1
3072	CDH18	1
3073	CDH19	2.110881e-01
3074	CDH2	1
3075	CDH20	1
3076	CDH22	1.383477e-01
Done

Running MutSig 2:
Scatter job 34: processing genes 2986 - 3076
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CDH12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.486977e-02	ci left: 5.484010e-01	ci right 5.679651e-01	k: 5582	n:10000
Cons ci ratio: 2.446268e-02	ci left: 7.107838e-01	ci right 7.284881e-01	k: 7197	n:10000
KS ci ratio: 5.095471e-02	ci left: 3.622168e-01	ci right 3.812580e-01	k: 3717	n:10000
CDH12   10000 perm   2 sec   (5542 perm/sec)   p_kst 3.717000e-01   p_cons 7.197000e-01   p_joint 5.582000e-01

Outputting figure to mutsig2_images.part000000000034/CDH12.3_2429_10000_0.3717_0.7197_0.5582.png
                gene_name: CDH12
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.56 
     ci_joint_bounds_left: 0.55 
    ci_joint_bounds_right: 0.57 

Current progress: 33 percent done.
CD99L2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.320349e-02	ci left: 5.724607e-01	ci right 5.918914e-01	k: 5822	n:10000
KS ci ratio: 8.654491e-03	ci left: 9.492931e-01	ci right 9.576401e-01	k: 9536	n:10000
CD99L2   10000 perm   1 sec   (7200 perm/sec)   p_kst 9.536000e-01   p_cons 5.822000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000034/CD99L2.2_833_10000_0.9536_0.5822_1.png
                gene_name: CD99L2
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.96 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.59 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
CDC42EP4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.143695e-02	ci left: 4.623746e-01	ci right 4.820416e-01	k: 4722	n:10000
Cons ci ratio: 4.605704e-02	ci left: 4.103009e-01	ci right 4.297457e-01	k: 4200	n:10000
KS ci ratio: 8.499247e-02	ci left: 1.678931e-01	ci right 1.828965e-01	k: 1753	n:10000
CDC42EP4   10000 perm   1 sec   (6791 perm/sec)   p_kst 1.753000e-01   p_cons 4.200000e-01   p_joint 4.722000e-01

Outputting figure to mutsig2_images.part000000000034/CDC42EP4.2_1075_10000_0.1753_0.42_0.4722.png
                gene_name: CDC42EP4
               theta_stop: 0.085 
                    nperm: 10000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.47 
     ci_joint_bounds_left: 0.46 
    ci_joint_bounds_right: 0.48 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000034
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 34 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1707>
Subject: Job 8704146: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1707>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000035> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:57 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000035.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000035.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 35  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000035.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    170.85 sec.
    Max Memory :      5717 MB
    Max Swap   :      8437 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
35
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 35
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 35: processing genes 3077 - 3166
Calculating significance of each gene.
Using projection method.
3077	CDH23	7.537907e-01
3078	CDH24	6.383142e-02
3079	CDH26	1
3080	CDH3	1
3081	CDH4	1
3082	CDH5	1
3083	CDH6	1
3084	CDH7	8.220599e-02
In gene CDH8 the following bins exceed PROBCAP:
    THCA-DJ-A13V-TP	categ 5	N = 2444    n = 1	mu =   9.97e-08
3085	CDH8	4.740068e-02
3086	CDH9	1
3087	CDHR1	1.435360e-01
3088	CDHR2	1
3089	CDHR3	1
3090	CDHR5	1
3091	CDIPT	1
3092	CDK1	1
3093	CDK10	1
3094	CDK11A	9.924799e-02
3095	CDK11B	1
In gene CDK12 the following bins exceed PROBCAP:
    THCA-FE-A3PB-TP	categ 6	N = 4475    n = 1	mu =   1.02e-07
3096	CDK12	1.018198e-01
3097	CDK13	1.725339e-01
3098	CDK14	1
3099	CDK15	1
3100	CDK16	1
3101	CDK17	1
3102	CDK18	1
3103	CDK19	1
3104	CDK2	1
3105	CDK20	1
3106	CDK2AP1	1
3107	CDK2AP2	1
3108	CDK3	1
3109	CDK4	1
3110	CDK5	4.624521e-02
3111	CDK5R1	1
3112	CDK5R2	1
3113	CDK5RAP1	4.916728e-02
3114	CDK5RAP2	1
In gene CDK5RAP3 the following bins exceed PROBCAP:
    THCA-DJ-A2PR-TP	categ 6	N = 1567    n = 1	mu =   1.72e-07
3115	CDK5RAP3	1.489599e-01
3116	CDK6	1
3117	CDK7	1
3118	CDK8	1
3119	CDK9	1
3120	CDKAL1	1
3121	CDKL1	1
3122	CDKL2	1.731461e-01
3123	CDKL3	1
3124	CDKL4	1
3125	CDKL5	1.557419e-01
3126	CDKN1A	1
3127	CDKN1B	1
3128	CDKN2A	1
3129	CDKN2AIP	1
3130	CDKN2AIPNL	1
3131	CDKN2B	1
3132	CDKN2C	1.752341e-02
3133	CDKN2D	1
3134	CDKN3	1
3135	CDNF	1.168067e-02
3136	CDO1	1
3137	CDON	1
3138	CDR1	1
3139	CDR2	5.496125e-02
3140	CDR2L	1
3141	CDRT1	1
3142	CDRT15	1
3143	CDRT4	1
3144	CDS1	1
3145	CDS2	6.055988e-02
3146	CDSN	1
3147	CDT1	1
3148	CDV3	1
3149	CDX1	1
3150	CDX2	1
3151	CDX4	1
3152	CDYL	1
3153	CDYL2	1
3154	CEACAM1	1
3155	CEACAM16	1
3156	CEACAM18	1
3157	CEACAM19	1
3158	CEACAM20	7.330357e-02
3159	CEACAM21	1
3160	CEACAM3	1
3161	CEACAM4	1
3162	CEACAM5	1.204755e-01
3163	CEACAM6	1
3164	CEACAM7	1
3165	CEACAM8	1.421025e-01
3166	CEBPB	1
Done

Running MutSig 2:
Scatter job 35: processing genes 3077 - 3166
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CDH8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.601820e-01	ci left: 5.195823e-02	ci right 6.110226e-02	k: 564	n:10000
Cons ci ratio: 2.098973e-01	ci left: 3.015459e-02	ci right 3.732038e-02	k: 336	n:10000
KS ci ratio: 7.262343e-03	ci left: 9.632049e-01	ci right 9.703198e-01	k: 9669	n:10000
CDH8   10000 perm   2 sec   (4219 perm/sec)   p_kst 9.669000e-01   p_cons 3.360000e-02   p_joint 5.640000e-02

Joint ci ratio: 1.134813e-01	ci left: 5.309651e-02	ci right 5.953324e-02	k: 1125	n:20000
Cons ci ratio: 1.481959e-01	ci left: 3.129024e-02	ci right 3.634648e-02	k: 675	n:20000
KS ci ratio: 5.055350e-03	ci left: 9.653113e-01	ci right 9.702515e-01	k: 19357	n:20000
CDH8   20000 perm   7 sec   (2925 perm/sec)   p_kst 9.678500e-01   p_cons 3.375000e-02   p_joint 5.625000e-02

Joint ci ratio: 9.294970e-02	ci left: 5.335946e-02	ci right 5.859361e-02	k: 1678	n:30000
Cons ci ratio: 1.234817e-01	ci left: 3.048980e-02	ci right 3.453473e-02	k: 974	n:30000
KS ci ratio: 4.076798e-03	ci left: 9.665640e-01	ci right 9.705446e-01	k: 29058	n:30000
CDH8   30000 perm   9 sec   (3294 perm/sec)   p_kst 9.686000e-01   p_cons 3.246667e-02   p_joint 5.593333e-02

Joint ci ratio: 7.985051e-02	ci left: 5.455147e-02	ci right 5.911313e-02	k: 2272	n:40000
Cons ci ratio: 1.059735e-01	ci left: 3.131958e-02	ci right 3.484863e-02	k: 1322	n:40000
KS ci ratio: 3.549006e-03	ci left: 9.665106e-01	ci right 9.699710e-01	k: 38731	n:40000
CDH8   40000 perm   11 sec   (3531 perm/sec)   p_kst 9.682750e-01   p_cons 3.305000e-02   p_joint 5.680000e-02

Joint ci ratio: 7.227753e-02	ci left: 5.354834e-02	ci right 5.758346e-02	k: 2777	n:50000
Cons ci ratio: 9.489718e-02	ci left: 3.143183e-02	ci right 3.458269e-02	k: 1649	n:50000
KS ci ratio: 3.152098e-03	ci left: 9.671363e-01	ci right 9.702090e-01	k: 48435	n:50000
CDH8   50000 perm   14 sec   (3677 perm/sec)   p_kst 9.687000e-01   p_cons 3.298000e-02   p_joint 5.554000e-02

Outputting figure to mutsig2_images.part000000000035/CDH8.2_2444_50000_0.9687_0.03298_0.05554.png
                gene_name: CDH8
               theta_stop: 0.095 
                    nperm: 50000 
                     p_ks: 0.97 
        ci_ks_bounds_left: 0.97 
       ci_ks_bounds_right: 0.97 
                   p_cons: 0.033 
      ci_cons_bounds_left: 0.031 
     ci_cons_bounds_right: 0.035 
                  p_joint: 0.056 
     ci_joint_bounds_left: 0.054 
    ci_joint_bounds_right: 0.058 

Current progress: 50 percent done.
CDK12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.193970e-02	ci left: 3.533674e-01	ci right 3.723125e-01	k: 3628	n:10000
Cons ci ratio: 5.744651e-02	ci left: 3.084797e-01	ci right 3.268266e-01	k: 3176	n:10000
KS ci ratio: 9.707249e-02	ci left: 1.333527e-01	ci right 1.470577e-01	k: 1401	n:10000
CDK12   10000 perm   2 sec   (5145 perm/sec)   p_kst 1.401000e-01   p_cons 3.176000e-01   p_joint 3.628000e-01

Outputting figure to mutsig2_images.part000000000035/CDK12.2_4529_10000_0.1401_0.3176_0.3628.png
                gene_name: CDK12
               theta_stop: 0.097 
                    nperm: 10000 
                     p_ks: 0.14 
        ci_ks_bounds_left: 0.13 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.36 
     ci_joint_bounds_left: 0.35 
    ci_joint_bounds_right: 0.37 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000035
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 35 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1705>
Subject: Job 8704147: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1705>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000036> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:38 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000036.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000036.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 36  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000036.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    159.25 sec.
    Max Memory :      5522 MB
    Max Swap   :      8363 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
36
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 36
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 36: processing genes 3167 - 3257
Calculating significance of each gene.
Using projection method.
3167	CEBPD	1
3168	CEBPE	1
3169	CEBPG	1
3170	CEBPZ	1
3171	CECR1	1
3172	CECR2	1
3173	CECR5	1
3174	CECR6	1
3175	CEL	1
3176	CELA1	1
3177	CELA2A	1
3178	CELA2B	1
3179	CELA3A	1
3180	CELA3B	1
3181	CELF1	1
3182	CELF2	1.835983e-01
3183	CELF3	1
3184	CELF4	1
3185	CELF5	1
3186	CELF6	1
3187	CELSR1	1
3188	CELSR2	1
3189	CELSR3	1
3190	CEMP1	1
3191	CEND1	1
3192	CENPA	1
3193	CENPB	1
3194	CENPBD1	1
3195	CENPC1	1
3196	CENPE	6.612089e-01
3197	CENPF	4.940507e-01
3198	CENPH	1
3199	CENPI	2.328592e-01
3200	CENPJ	1
3201	CENPK	1
3202	CENPL	1
3203	CENPM	1
3204	CENPN	1
3205	CENPO	1
3206	CENPP	1
3207	CENPQ	1
3208	CENPT	1
3209	CENPV	1
3210	CENPW	1.030404e-02
3211	CEP110	1.702941e-01
3212	CEP120	1
3213	CEP135	1
3214	CEP152	2.569003e-01
3215	CEP164	1
3216	CEP170	1
3217	CEP192	5.495371e-02
3218	CEP250	4.899612e-01
3219	CEP290	3.394391e-01
3220	CEP350	3.974516e-01
3221	CEP55	1
3222	CEP57	1
3223	CEP63	1
In gene CEP68 the following bins exceed PROBCAP:
    THCA-H2-A26U-TP	categ 6	N = 2294    n = 1	mu =   9.95e-08
3224	CEP68	1.198884e-01
3225	CEP70	1
3226	CEP72	1
3227	CEP76	1
3228	CEP78	1
3229	CEP97	1
3230	CEPT1	3.734760e-02
3231	CER1	1
3232	CERCAM	1
3233	CERK	1
3234	CERKL	1
3235	CES1	1
3236	CES2	1
3237	CES3	1
3238	CES7	2.221571e-01
3239	CES8	8.460938e-02
3240	CETN1	1
3241	CETN2	1
3242	CETN3	1
3243	CETP	1
3244	CFB	2.141709e-01
3245	CFD	1
3246	CFDP1	1
3247	CFH	1
3248	CFHR1	1
3249	CFHR2	1
3250	CFHR3	1
3251	CFHR4	1
3252	CFHR5	6.092315e-02
3253	CFI	1
3254	CFL1	1
3255	CFL2	1
3256	CFLAR	1
3257	CFP	1
Done

Running MutSig 2:
Scatter job 36: processing genes 3167 - 3257
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CEP192
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.328950e-02	ci left: 7.303745e-01	ci right 7.476861e-01	k: 7391	n:10000
Cons ci ratio: 4.232859e-02	ci left: 4.517915e-01	ci right 4.714309e-01	k: 4616	n:10000
KS ci ratio: 2.252919e-02	ci left: 7.431099e-01	ci right 7.601433e-01	k: 7517	n:10000
CEP192   10000 perm   3 sec   (3990 perm/sec)   p_kst 7.517000e-01   p_cons 4.616000e-01   p_joint 7.391000e-01

Outputting figure to mutsig2_images.part000000000036/CEP192.3_7790_10000_0.7517_0.4616_0.7391.png
                gene_name: CEP192
               theta_stop: 0.042 
                    nperm: 10000 
                     p_ks: 0.75 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.76 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 0.74 
     ci_joint_bounds_left: 0.73 
    ci_joint_bounds_right: 0.75 

Current progress: 50 percent done.
CEP110
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.480849e-02	ci left: 7.050317e-01	ci right 7.228435e-01	k: 7140	n:10000
KS ci ratio: 5.651887e-02	ci left: 3.155244e-01	ci right 3.339778e-01	k: 3247	n:10000
CEP110   10000 perm   2 sec   (4504 perm/sec)   p_kst 3.247000e-01   p_cons 7.140000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000036/CEP110.2_7146_10000_0.3247_0.714_1.png
                gene_name: CEP110
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.71 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.72 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000036
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 36 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1710>
Subject: Job 8704150: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1710>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000037> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 22:24:55 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000037.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000037.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 37  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000037.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10510.59 sec.
    Max Memory :      6025 MB
    Max Swap   :      8602 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
37
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 37
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 37: processing genes 3258 - 3347
Calculating significance of each gene.
Using projection method.
3258	CFTR	4.318480e-01
3259	CGA	1
3260	CGB	1
3261	CGB1	5.789732e-02
3262	CGB2	1
3263	CGB5	1
3264	CGB7	1
3265	CGB8	1
3266	CGGBP1	1
3267	CGN	1.955632e-02
3268	CGNL1	2.486594e-01
3269	CGREF1	1
3270	CGRRF1	1
3271	CH25H	1
3272	CHAC1	1
3273	CHAC2	1
3274	CHAD	1
3275	CHAF1A	2.110567e-01
3276	CHAF1B	1
3277	CHAT	1
3278	CHCHD1	1
3279	CHCHD10	1
3280	CHCHD2	1
3281	CHCHD3	1
3282	CHCHD4	1
3283	CHCHD5	1
3284	CHCHD6	1
3285	CHCHD7	1
3286	CHCHD8	1
3287	CHD1	1
3288	CHD1L	1
In gene CHD2 the following bins exceed PROBCAP:
    THCA-E3-A3E3-TP	categ 6	N = 5620    n = 1	mu =   1.76e-07
    THCA-EM-A2CP-TP	categ 6	N = 5526    n = 1	mu =   6.74e-08
3289	CHD2	6.671780e-03
3290	CHD3	8.319410e-02
3291	CHD4	6.035135e-01
3292	CHD5	1
3293	CHD6	1
3294	CHD7	3.511017e-01
3295	CHD8	4.871580e-01
3296	CHD9	2.146742e-01
3297	CHDH	1
3298	CHEK1	1.634803e-01
3299	CHEK2	5.474000e-05
3300	CHERP	1
3301	CHFR	1
3302	CHGA	1
3303	CHGB	1.329970e-01
3304	CHI3L1	1.736147e-01
3305	CHI3L2	1
3306	CHIA	1
3307	CHIC2	1
3308	CHID1	4.069357e-02
3309	CHIT1	1
3310	CHKA	1
3311	CHKB	1
3312	CHL1	1
3313	CHM	1
3314	CHML	1
3315	CHMP1A	1
3316	CHMP1B	1
3317	CHMP2A	1
3318	CHMP2B	1
3319	CHMP4A	1
3320	CHMP4B	1
3321	CHMP4C	1
3322	CHMP5	1
3323	CHMP6	1
3324	CHMP7	1
3325	CHN1	4.909958e-02
3326	CHN2	1
3327	CHODL	1
3328	CHORDC1	1
3329	CHP	1
3330	CHP2	1
3331	CHPF	1
3332	CHPF2	1
3333	CHPT1	1
3334	CHRAC1	1
3335	CHRD	1
3336	CHRDL1	1
3337	CHRDL2	1
3338	CHRFAM7A	1
3339	CHRM1	1
3340	CHRM2	1
3341	CHRM3	1.795609e-01
3342	CHRM4	1.545580e-01
3343	CHRM5	1.620332e-01
3344	CHRNA1	1
3345	CHRNA10	1
3346	CHRNA2	1
3347	CHRNA3	1
Done

Running MutSig 2:
Scatter job 37: processing genes 3258 - 3347
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CHD2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.769032e-01	ci left: 4.264711e-02	ci right 5.101943e-02	k: 467	n:10000
Cons ci ratio: 5.022109e-02	ci left: 3.689804e-01	ci right 3.880904e-01	k: 3785	n:10000
KS ci ratio: 3.289572e-01	ci left: 1.169777e-02	ci right 1.639161e-02	k: 139	n:10000
CHD2   10000 perm   2 sec   (4681 perm/sec)   p_kst 1.390000e-02   p_cons 3.785000e-01   p_joint 4.670000e-02

Joint ci ratio: 1.267345e-01	ci left: 4.275002e-02	ci right 4.858299e-02	k: 912	n:20000
Cons ci ratio: 3.711110e-02	ci left: 3.514016e-01	ci right 3.647397e-01	k: 7161	n:20000
KS ci ratio: 2.281111e-01	ci left: 1.288916e-02	ci right 1.625414e-02	k: 290	n:20000
CHD2   20000 perm   7 sec   (2945 perm/sec)   p_kst 1.450000e-02   p_cons 3.580500e-01   p_joint 4.560000e-02

Joint ci ratio: 1.585573e-01	ci left: 1.838165e-02	ci right 2.157893e-02	k: 598	n:30000
Cons ci ratio: 3.027033e-02	ci left: 3.531038e-01	ci right 3.639902e-01	k: 10756	n:30000
KS ci ratio: 1.927416e-01	ci left: 1.228821e-02	ci right 1.494055e-02	k: 407	n:30000
CHD2   30000 perm   9 sec   (3217 perm/sec)   p_kst 1.356667e-02   p_cons 3.585333e-01   p_joint 1.993333e-02

Joint ci ratio: 1.553160e-01	ci left: 1.445643e-02	ci right 1.691461e-02	k: 626	n:40000
Cons ci ratio: 2.626146e-02	ci left: 3.530256e-01	ci right 3.624450e-01	k: 14309	n:40000
KS ci ratio: 1.659942e-01	ci left: 1.260773e-02	ci right 1.491366e-02	k: 549	n:40000
CHD2   40000 perm   12 sec   (3318 perm/sec)   p_kst 1.372500e-02   p_cons 3.577250e-01   p_joint 1.565000e-02

Joint ci ratio: 1.024630e-01	ci left: 2.698092e-02	ci right 2.991417e-02	k: 1421	n:50000
Cons ci ratio: 2.349152e-02	ci left: 3.534770e-01	ci right 3.618995e-01	k: 17884	n:50000
KS ci ratio: 1.485249e-01	ci left: 1.271868e-02	ci right 1.477834e-02	k: 686	n:50000
CHD2   50000 perm   15 sec   (3358 perm/sec)   p_kst 1.372000e-02   p_cons 3.576800e-01   p_joint 2.842000e-02

Joint ci ratio: 9.235573e-02	ci left: 2.780212e-02	ci right 3.051035e-02	k: 1748	n:60000
Cons ci ratio: 2.142063e-02	ci left: 3.543621e-01	ci right 3.620516e-01	k: 21492	n:60000
KS ci ratio: 1.374907e-01	ci left: 1.244694e-02	ci right 1.430057e-02	k: 801	n:60000
CHD2   60000 perm   19 sec   (3191 perm/sec)   p_kst 1.335000e-02   p_cons 3.582000e-01   p_joint 2.913333e-02

Joint ci ratio: 9.951451e-02	ci left: 2.060549e-02	ci right 2.277727e-02	k: 1517	n:70000
Cons ci ratio: 1.896836e-02	ci left: 3.753185e-01	ci right 3.825201e-01	k: 26524	n:70000
KS ci ratio: 1.276842e-01	ci left: 1.243678e-02	ci right 1.414678e-02	k: 929	n:70000
CHD2   70000 perm   23 sec   (3079 perm/sec)   p_kst 1.327143e-02   p_cons 3.789143e-01   p_joint 2.167143e-02

Joint ci ratio: 7.493505e-02	ci left: 3.183421e-02	ci right 3.432480e-02	k: 2645	n:80000
Cons ci ratio: 1.773728e-02	ci left: 3.757113e-01	ci right 3.824475e-01	k: 30326	n:80000
KS ci ratio: 1.192025e-01	ci left: 1.254188e-02	ci right 1.414370e-02	k: 1066	n:80000
CHD2   80000 perm   26 sec   (3031 perm/sec)   p_kst 1.332500e-02   p_cons 3.790750e-01   p_joint 3.306250e-02

Joint ci ratio: 7.148258e-02	ci left: 3.117633e-02	ci right 3.349838e-02	k: 2909	n:90000
Cons ci ratio: 1.678020e-02	ci left: 3.742981e-01	ci right 3.806431e-01	k: 33972	n:90000
KS ci ratio: 1.123083e-01	ci left: 1.260495e-02	ci right 1.411554e-02	k: 1201	n:90000
CHD2   90000 perm   29 sec   (3067 perm/sec)   p_kst 1.334444e-02   p_cons 3.774667e-01   p_joint 3.232222e-02

Joint ci ratio: 7.414697e-02	ci left: 2.618090e-02	ci right 2.820665e-02	k: 2718	n:100000
Cons ci ratio: 1.593495e-02	ci left: 3.739949e-01	ci right 3.800123e-01	k: 37700	n:100000
KS ci ratio: 1.067704e-01	ci left: 1.258939e-02	ci right 1.401904e-02	k: 1329	n:100000
CHD2   100000 perm   32 sec   (3087 perm/sec)   p_kst 1.329000e-02   p_cons 3.770000e-01   p_joint 2.718000e-02

Joint ci ratio: 7.456514e-02	ci left: 2.359442e-02	ci right 2.543076e-02	k: 2695	n:110000
Cons ci ratio: 1.516903e-02	ci left: 3.748882e-01	ci right 3.806274e-01	k: 41553	n:110000
KS ci ratio: 1.007939e-01	ci left: 1.287952e-02	ci right 1.425540e-02	k: 1491	n:110000
CHD2   110000 perm   36 sec   (3075 perm/sec)   p_kst 1.355455e-02   p_cons 3.777545e-01   p_joint 2.450000e-02

Joint ci ratio: 6.839895e-02	ci left: 2.572964e-02	ci right 2.756000e-02	k: 3196	n:120000
Cons ci ratio: 1.484612e-02	ci left: 3.647463e-01	ci right 3.702101e-01	k: 44097	n:120000
KS ci ratio: 9.697617e-02	ci left: 1.278146e-02	ci right 1.409221e-02	k: 1611	n:120000
CHD2   120000 perm   39 sec   (3079 perm/sec)   p_kst 1.342500e-02   p_cons 3.674750e-01   p_joint 2.663333e-02

Outputting figure to mutsig2_images.part000000000037/CHD2.4_5643_120000_0.013425_0.36747_0.026633.png
                gene_name: CHD2
               theta_stop: 0.097 
                    nperm: 120000 
                     p_ks: 0.013 
        ci_ks_bounds_left: 0.013 
       ci_ks_bounds_right: 0.014 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.027 
     ci_joint_bounds_left: 0.026 
    ci_joint_bounds_right: 0.028 

Current progress: 17 percent done.
CHEK2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.289572e-01	ci left: 1.169777e-02	ci right 1.639161e-02	k: 139	n:10000
Cons ci ratio: 3.417529e-02	ci left: 5.583228e-01	ci right 5.778375e-01	k: 5681	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
CHEK2   10000 perm   2 sec   (5249 perm/sec)   p_kst 1.000000e-04   p_cons 5.681000e-01   p_joint 1.390000e-02

Joint ci ratio: 3.313245e-01	ci left: 5.799905e-03	ci right 8.146877e-03	k: 138	n:20000
Cons ci ratio: 2.397556e-02	ci left: 5.651076e-01	ci right 5.788714e-01	k: 11440	n:20000
KS ci ratio: 2.262987e+00	ci left: 1.211069e-05	ci right 3.611872e-04	k: 2	n:20000
CHEK2   20000 perm   4 sec   (4930 perm/sec)   p_kst 1.000000e-04   p_cons 5.720000e-01   p_joint 6.900000e-03

Joint ci ratio: 3.818765e-01	ci left: 2.833370e-03	ci right 4.198905e-03	k: 104	n:30000
Cons ci ratio: 1.899997e-02	ci left: 5.809694e-01	ci right 5.921472e-01	k: 17597	n:30000
KS ci ratio: 1.959837e+00	ci left: 2.062288e-05	ci right 2.922143e-04	k: 3	n:30000
CHEK2   30000 perm   6 sec   (4775 perm/sec)   p_kst 1.000000e-04   p_cons 5.865667e-01   p_joint 3.466667e-03

Joint ci ratio: 5.099577e-01	ci left: 1.101224e-03	ci right 1.874063e-03	k: 58	n:40000
Cons ci ratio: 1.641450e-02	ci left: 5.829074e-01	ci right 5.925798e-01	k: 23510	n:40000
KS ci ratio: 1.600193e+00	ci left: 4.058837e-05	ci right 2.916840e-04	k: 5	n:40000
CHEK2   40000 perm   9 sec   (4601 perm/sec)   p_kst 1.250000e-04   p_cons 5.877500e-01   p_joint 1.450000e-03

Joint ci ratio: 4.750417e-01	ci left: 1.038628e-03	ci right 1.701445e-03	k: 67	n:50000
Cons ci ratio: 1.471956e-02	ci left: 5.821686e-01	ci right 5.908214e-01	k: 29325	n:50000
KS ci ratio: 1.481502e+00	ci left: 4.403912e-05	ci right 2.611710e-04	k: 6	n:50000
CHEK2   50000 perm   11 sec   (4522 perm/sec)   p_kst 1.200000e-04   p_cons 5.865000e-01   p_joint 1.340000e-03

Joint ci ratio: 4.649392e-01	ci left: 9.095833e-04	ci right 1.473787e-03	k: 70	n:60000
Cons ci ratio: 1.344912e-02	ci left: 5.821132e-01	ci right 5.900118e-01	k: 35164	n:60000
KS ci ratio: 1.385825e+00	ci left: 4.690730e-05	ci right 2.403631e-04	k: 7	n:60000
CHEK2   60000 perm   14 sec   (4378 perm/sec)   p_kst 1.166667e-04   p_cons 5.860667e-01   p_joint 1.166667e-03

Joint ci ratio: 4.822877e-01	ci left: 7.167227e-04	ci right 1.183390e-03	k: 65	n:70000
Cons ci ratio: 1.243049e-02	ci left: 5.832274e-01	ci right 5.905368e-01	k: 41082	n:70000
KS ci ratio: 1.306573e+00	ci left: 4.934171e-05	ci right 2.251759e-04	k: 8	n:70000
CHEK2   70000 perm   17 sec   (4140 perm/sec)   p_kst 1.142857e-04   p_cons 5.868857e-01   p_joint 9.285714e-04

Joint ci ratio: 4.683217e-01	ci left: 6.711365e-04	ci right 1.091424e-03	k: 69	n:80000
Cons ci ratio: 1.163604e-02	ci left: 5.831157e-01	ci right 5.899530e-01	k: 46923	n:80000
KS ci ratio: 1.239528e+00	ci left: 5.144341e-05	ci right 2.135493e-04	k: 9	n:80000
CHEK2   80000 perm   21 sec   (3749 perm/sec)   p_kst 1.125000e-04   p_cons 5.865375e-01   p_joint 8.625000e-04

Joint ci ratio: 4.683448e-01	ci left: 5.965599e-04	ci right 9.701670e-04	k: 69	n:90000
Cons ci ratio: 1.096665e-02	ci left: 5.834857e-01	ci right 5.899309e-01	k: 52804	n:90000
KS ci ratio: 1.181846e+00	ci left: 5.328334e-05	ci right 2.043278e-04	k: 10	n:90000
CHEK2   90000 perm   24 sec   (3749 perm/sec)   p_kst 1.111111e-04   p_cons 5.867111e-01   p_joint 7.666667e-04

Joint ci ratio: 4.618078e-01	ci left: 5.545562e-04	ci right 8.954853e-04	k: 71	n:100000
Cons ci ratio: 1.039105e-02	ci left: 5.842511e-01	ci right 5.903638e-01	k: 58731	n:100000
KS ci ratio: 1.181854e+00	ci left: 4.795490e-05	ci right 1.838958e-04	k: 10	n:100000
CHEK2   100000 perm   27 sec   (3746 perm/sec)   p_kst 1.000000e-04   p_cons 5.873100e-01   p_joint 7.100000e-04

Joint ci ratio: 1.623387e-01	ci left: 4.844567e-03	ci right 5.709106e-03	k: 579	n:110000
Cons ci ratio: 9.910293e-03	ci left: 5.842564e-01	ci right 5.900844e-01	k: 64589	n:110000
KS ci ratio: 1.047593e+00	ci left: 6.292829e-05	ci right 2.020860e-04	k: 13	n:110000
CHEK2   110000 perm   29 sec   (3732 perm/sec)   p_kst 1.181818e-04   p_cons 5.871727e-01   p_joint 5.263636e-03

Joint ci ratio: 1.599001e-01	ci left: 4.584755e-03	ci right 5.389454e-03	k: 597	n:120000
Cons ci ratio: 9.486389e-03	ci left: 5.844832e-01	ci right 5.900626e-01	k: 70473	n:120000
KS ci ratio: 9.506683e-01	ci left: 7.621338e-05	ci right 2.165160e-04	k: 16	n:120000
CHEK2   120000 perm   32 sec   (3719 perm/sec)   p_kst 1.333333e-04   p_cons 5.872750e-01   p_joint 4.975000e-03

Joint ci ratio: 1.660385e-01	ci left: 3.914683e-03	ci right 4.630784e-03	k: 554	n:130000
Cons ci ratio: 9.117815e-03	ci left: 5.844024e-01	ci right 5.897629e-01	k: 76321	n:130000
KS ci ratio: 9.238853e-01	ci left: 7.617968e-05	ci right 2.093660e-04	k: 17	n:130000
CHEK2   130000 perm   35 sec   (3700 perm/sec)   p_kst 1.307692e-04   p_cons 5.870846e-01   p_joint 4.261538e-03

Joint ci ratio: 1.668201e-01	ci left: 3.600787e-03	ci right 4.262877e-03	k: 549	n:140000
Cons ci ratio: 8.780955e-03	ci left: 5.847873e-01	ci right 5.899520e-01	k: 82232	n:140000
KS ci ratio: 9.238902e-01	ci left: 7.073816e-05	ci right 1.944118e-04	k: 17	n:140000
CHEK2   140000 perm   38 sec   (3676 perm/sec)   p_kst 1.214286e-04   p_cons 5.873714e-01   p_joint 3.921429e-03

Joint ci ratio: 1.686993e-01	ci left: 3.284047e-03	ci right 3.895388e-03	k: 537	n:150000
Cons ci ratio: 8.477348e-03	ci left: 5.852106e-01	ci right 5.901994e-01	k: 88156	n:150000
KS ci ratio: 8.992497e-01	ci left: 7.112111e-05	ci right 1.896451e-04	k: 18	n:150000
CHEK2   150000 perm   41 sec   (3646 perm/sec)   p_kst 1.200000e-04   p_cons 5.877067e-01   p_joint 3.580000e-03

Joint ci ratio: 1.859862e-01	ci left: 2.511241e-03	ci right 3.032036e-03	k: 442	n:160000
Cons ci ratio: 8.202664e-03	ci left: 5.856149e-01	ci right 5.904444e-01	k: 94085	n:160000
KS ci ratio: 8.553553e-01	ci left: 7.635487e-05	ci right 1.930458e-04	k: 20	n:160000
CHEK2   160000 perm   44 sec   (3612 perm/sec)   p_kst 1.250000e-04   p_cons 5.880313e-01   p_joint 2.762500e-03

Joint ci ratio: 1.879251e-01	ci left: 2.313035e-03	ci right 2.798295e-03	k: 433	n:170000
Cons ci ratio: 7.955082e-03	ci left: 5.858502e-01	ci right 5.905351e-01	k: 99993	n:170000
KS ci ratio: 8.553588e-01	ci left: 7.186331e-05	ci right 1.816905e-04	k: 20	n:170000
CHEK2   170000 perm   48 sec   (3571 perm/sec)   p_kst 1.176471e-04   p_cons 5.881941e-01   p_joint 2.547059e-03

Joint ci ratio: 2.102331e-01	ci left: 1.725159e-03	ci right 2.135593e-03	k: 346	n:180000
Cons ci ratio: 7.735292e-03	ci left: 5.856442e-01	ci right 5.901974e-01	k: 105826	n:180000
KS ci ratio: 8.356934e-01	ci left: 7.221991e-05	ci right 1.783319e-04	k: 21	n:180000
CHEK2   180000 perm   51 sec   (3533 perm/sec)   p_kst 1.166667e-04   p_cons 5.879222e-01   p_joint 1.922222e-03

Joint ci ratio: 2.055495e-01	ci left: 1.714187e-03	ci right 2.111783e-03	k: 362	n:190000
Cons ci ratio: 7.533827e-03	ci left: 5.853931e-01	ci right 5.898253e-01	k: 111646	n:190000
KS ci ratio: 8.173249e-01	ci left: 7.256602e-05	ci right 1.753014e-04	k: 22	n:190000
CHEK2   190000 perm   54 sec   (3494 perm/sec)   p_kst 1.157895e-04   p_cons 5.876105e-01   p_joint 1.905263e-03

Joint ci ratio: 1.910750e-01	ci left: 1.899361e-03	ci right 2.305287e-03	k: 419	n:200000
Cons ci ratio: 7.342168e-03	ci left: 5.855089e-01	ci right 5.898286e-01	k: 117534	n:200000
KS ci ratio: 6.276396e-01	ci left: 1.344587e-04	ci right 2.607806e-04	k: 38	n:200000
CHEK2   200000 perm   58 sec   (3455 perm/sec)   p_kst 1.900000e-04   p_cons 5.876700e-01   p_joint 2.095000e-03

Joint ci ratio: 1.875385e-01	ci left: 1.881493e-03	ci right 2.275311e-03	k: 435	n:210000
Cons ci ratio: 7.171682e-03	ci left: 5.851241e-01	ci right 5.893402e-01	k: 123319	n:210000
KS ci ratio: 6.048072e-01	ci left: 1.401098e-04	ci right 2.648533e-04	k: 41	n:210000
CHEK2   210000 perm   62 sec   (3412 perm/sec)   p_kst 1.952381e-04   p_cons 5.872333e-01   p_joint 2.071429e-03

Joint ci ratio: 1.915508e-01	ci left: 1.718021e-03	ci right 2.086210e-03	k: 417	n:220000
Cons ci ratio: 7.005438e-03	ci left: 5.852666e-01	ci right 5.893856e-01	k: 129212	n:220000
KS ci ratio: 5.909018e-01	ci left: 1.414549e-04	ci right 2.632671e-04	k: 43	n:220000
CHEK2   220000 perm   65 sec   (3372 perm/sec)   p_kst 1.954545e-04   p_cons 5.873273e-01   p_joint 1.895455e-03

Joint ci ratio: 2.105815e-01	ci left: 1.345977e-03	ci right 1.666796e-03	k: 345	n:230000
Cons ci ratio: 7.055402e-03	ci left: 5.710146e-01	ci right 5.750619e-01	k: 131799	n:230000
KS ci ratio: 5.657430e-01	ci left: 1.501508e-04	ci right 2.717301e-04	k: 47	n:230000
CHEK2   230000 perm   69 sec   (3327 perm/sec)   p_kst 2.043478e-04   p_cons 5.730391e-01   p_joint 1.500000e-03

Joint ci ratio: 2.087830e-01	ci left: 1.313579e-03	ci right 1.623661e-03	k: 351	n:240000
Cons ci ratio: 6.906287e-03	ci left: 5.710973e-01	ci right 5.750593e-01	k: 137539	n:240000
KS ci ratio: 5.599417e-01	ci left: 1.474678e-04	ci right 2.651623e-04	k: 48	n:240000
CHEK2   240000 perm   73 sec   (3292 perm/sec)   p_kst 2.000000e-04   p_cons 5.730792e-01   p_joint 1.462500e-03

Joint ci ratio: 2.093857e-01	ci left: 1.253451e-03	ci right 1.550302e-03	k: 349	n:250000
Cons ci ratio: 6.763534e-03	ci left: 5.713704e-01	ci right 5.752519e-01	k: 143328	n:250000
KS ci ratio: 5.435486e-01	ci left: 1.518951e-04	ci right 2.682137e-04	k: 51	n:250000
CHEK2   250000 perm   77 sec   (3251 perm/sec)   p_kst 2.040000e-04   p_cons 5.733120e-01   p_joint 1.396000e-03

Joint ci ratio: 2.058868e-01	ci left: 1.248995e-03	ci right 1.539225e-03	k: 361	n:260000
Cons ci ratio: 6.633345e-03	ci left: 5.713230e-01	ci right 5.751292e-01	k: 149039	n:260000
KS ci ratio: 5.333880e-01	ci left: 1.526984e-04	ci right 2.666274e-04	k: 53	n:260000
CHEK2   260000 perm   81 sec   (3212 perm/sec)   p_kst 2.038462e-04   p_cons 5.732269e-01   p_joint 1.388462e-03

Joint ci ratio: 2.093966e-01	ci left: 1.160597e-03	ci right 1.435473e-03	k: 349	n:270000
Cons ci ratio: 6.511480e-03	ci left: 5.711983e-01	ci right 5.749335e-01	k: 154728	n:270000
KS ci ratio: 5.285179e-01	ci left: 1.502496e-04	ci right 2.609487e-04	k: 54	n:270000
CHEK2   270000 perm   86 sec   (3155 perm/sec)   p_kst 2.000000e-04   p_cons 5.730667e-01   p_joint 1.292593e-03

Joint ci ratio: 2.236031e-01	ci left: 9.738826e-04	ci right 1.222344e-03	k: 306	n:280000
Cons ci ratio: 6.394459e-03	ci left: 5.712082e-01	ci right 5.748760e-01	k: 160452	n:280000
KS ci ratio: 5.191629e-01	ci left: 1.510813e-04	ci right 2.597089e-04	k: 56	n:280000
CHEK2   280000 perm   91 sec   (3083 perm/sec)   p_kst 2.000000e-04   p_cons 5.730429e-01   p_joint 1.092857e-03

Joint ci ratio: 2.448914e-01	ci left: 7.747272e-04	ci right 9.940656e-04	k: 255	n:290000
Cons ci ratio: 6.284812e-03	ci left: 5.711179e-01	ci right 5.747220e-01	k: 166147	n:290000
KS ci ratio: 5.060166e-01	ci left: 1.548777e-04	ci right 2.624257e-04	k: 59	n:290000
CHEK2   290000 perm   95 sec   (3043 perm/sec)   p_kst 2.034483e-04   p_cons 5.729207e-01   p_joint 8.793103e-04

Joint ci ratio: 2.393447e-01	ci left: 7.864772e-04	ci right 1.003351e-03	k: 267	n:300000
Cons ci ratio: 6.180534e-03	ci left: 5.710408e-01	ci right 5.745844e-01	k: 171844	n:300000
KS ci ratio: 4.938209e-01	ci left: 1.584537e-04	ci right 2.649296e-04	k: 62	n:300000
CHEK2   300000 perm   101 sec   (2969 perm/sec)   p_kst 2.066667e-04   p_cons 5.728133e-01   p_joint 8.900000e-04

Joint ci ratio: 2.380186e-01	ci left: 7.702049e-04	ci right 9.812412e-04	k: 270	n:310000
Cons ci ratio: 6.080277e-03	ci left: 5.710499e-01	ci right 5.745358e-01	k: 177566	n:310000
KS ci ratio: 4.861644e-01	ci left: 1.589964e-04	ci right 2.636266e-04	k: 64	n:310000
CHEK2   310000 perm   105 sec   (2943 perm/sec)   p_kst 2.064516e-04   p_cons 5.727935e-01   p_joint 8.709677e-04

Joint ci ratio: 2.345816e-01	ci left: 7.696560e-04	ci right 9.770548e-04	k: 278	n:320000
Cons ci ratio: 5.985128e-03	ci left: 5.710276e-01	ci right 5.744586e-01	k: 183278	n:320000
KS ci ratio: 4.861660e-01	ci left: 1.540277e-04	ci right 2.553885e-04	k: 64	n:320000
CHEK2   320000 perm   110 sec   (2918 perm/sec)   p_kst 2.000000e-04   p_cons 5.727437e-01   p_joint 8.687500e-04

Joint ci ratio: 2.304869e-01	ci left: 7.748712e-04	ci right 9.795119e-04	k: 288	n:330000
Cons ci ratio: 5.894968e-03	ci left: 5.709524e-01	ci right 5.743311e-01	k: 188972	n:330000
KS ci ratio: 4.753201e-01	ci left: 1.573491e-04	ci right 2.578342e-04	k: 67	n:330000
CHEK2   330000 perm   114 sec   (2892 perm/sec)   p_kst 2.030303e-04   p_cons 5.726424e-01   p_joint 8.727273e-04

Joint ci ratio: 2.304899e-01	ci left: 7.520798e-04	ci right 9.507042e-04	k: 288	n:340000
Cons ci ratio: 5.805971e-03	ci left: 5.711175e-01	ci right 5.744460e-01	k: 194746	n:340000
KS ci ratio: 4.718640e-01	ci left: 1.553111e-04	ci right 2.535409e-04	k: 68	n:340000
CHEK2   340000 perm   119 sec   (2868 perm/sec)   p_kst 2.000000e-04   p_cons 5.727824e-01   p_joint 8.470588e-04

Joint ci ratio: 2.273646e-01	ci left: 7.521382e-04	ci right 9.477069e-04	k: 296	n:350000
Cons ci ratio: 5.722021e-03	ci left: 5.711763e-01	ci right 5.744568e-01	k: 200486	n:350000
KS ci ratio: 4.651706e-01	ci left: 1.559130e-04	ci right 2.526813e-04	k: 70	n:350000
CHEK2   350000 perm   123 sec   (2842 perm/sec)   p_kst 2.000000e-04   p_cons 5.728171e-01   p_joint 8.457143e-04

Joint ci ratio: 2.225449e-01	ci left: 7.653226e-04	ci right 9.595234e-04	k: 309	n:360000
Cons ci ratio: 5.640426e-03	ci left: 5.713350e-01	ci right 5.745694e-01	k: 206263	n:360000
KS ci ratio: 4.556433e-01	ci left: 1.589487e-04	ci right 2.549560e-04	k: 73	n:360000
CHEK2   360000 perm   128 sec   (2816 perm/sec)   p_kst 2.027778e-04   p_cons 5.729528e-01   p_joint 8.583333e-04

Joint ci ratio: 2.193829e-01	ci left: 7.676164e-04	ci right 9.592586e-04	k: 318	n:370000
Cons ci ratio: 5.562316e-03	ci left: 5.714773e-01	ci right 5.746675e-01	k: 212037	n:370000
KS ci ratio: 4.556446e-01	ci left: 1.546527e-04	ci right 2.480654e-04	k: 73	n:370000
CHEK2   370000 perm   133 sec   (2792 perm/sec)   p_kst 1.972973e-04   p_cons 5.730730e-01   p_joint 8.594595e-04

Joint ci ratio: 2.163521e-01	ci left: 7.698080e-04	ci right 9.589894e-04	k: 327	n:380000
Cons ci ratio: 5.489341e-03	ci left: 5.714360e-01	ci right 5.745840e-01	k: 217744	n:380000
KS ci ratio: 4.525973e-01	ci left: 1.529133e-04	ci right 2.444682e-04	k: 74	n:380000
CHEK2   380000 perm   137 sec   (2768 perm/sec)   p_kst 1.947368e-04   p_cons 5.730105e-01   p_joint 8.605263e-04

Joint ci ratio: 1.920910e-01	ci left: 9.642211e-04	ci right 1.171512e-03	k: 415	n:390000
Cons ci ratio: 5.418795e-03	ci left: 5.714304e-01	ci right 5.745378e-01	k: 223464	n:390000
KS ci ratio: 4.496104e-01	ci left: 1.512651e-04	ci right 2.410535e-04	k: 75	n:390000
CHEK2   390000 perm   142 sec   (2744 perm/sec)   p_kst 1.923077e-04   p_cons 5.729846e-01   p_joint 1.064103e-03

Joint ci ratio: 1.904959e-01	ci left: 9.567771e-04	ci right 1.160562e-03	k: 422	n:400000
Cons ci ratio: 5.350053e-03	ci left: 5.715029e-01	ci right 5.745711e-01	k: 229215	n:400000
KS ci ratio: 4.496116e-01	ci left: 1.474834e-04	ci right 2.350273e-04	k: 75	n:400000
CHEK2   400000 perm   147 sec   (2714 perm/sec)   p_kst 1.875000e-04   p_cons 5.730375e-01   p_joint 1.055000e-03

Joint ci ratio: 1.880662e-01	ci left: 9.589992e-04	ci right 1.160354e-03	k: 433	n:410000
Cons ci ratio: 5.285470e-03	ci left: 5.714232e-01	ci right 5.744538e-01	k: 234905	n:410000
KS ci ratio: 4.355120e-01	ci left: 1.547225e-04	ci right 2.428404e-04	k: 80	n:410000
CHEK2   410000 perm   152 sec   (2690 perm/sec)   p_kst 1.951220e-04   p_cons 5.729390e-01   p_joint 1.056098e-03

Joint ci ratio: 1.867805e-01	ci left: 9.497809e-04	ci right 1.147682e-03	k: 439	n:420000
Cons ci ratio: 5.222128e-03	ci left: 5.714452e-01	ci right 5.744395e-01	k: 240636	n:420000
KS ci ratio: 4.355130e-01	ci left: 1.510386e-04	ci right 2.370586e-04	k: 80	n:420000
CHEK2   420000 perm   158 sec   (2662 perm/sec)   p_kst 1.904762e-04   p_cons 5.729429e-01   p_joint 1.045238e-03

Joint ci ratio: 1.840804e-01	ci left: 9.565225e-04	ci right 1.152626e-03	k: 452	n:430000
Cons ci ratio: 5.159833e-03	ci left: 5.715781e-01	ci right 5.745372e-01	k: 246415	n:430000
KS ci ratio: 4.302339e-01	ci left: 1.516703e-04	ci right 2.367007e-04	k: 82	n:430000
CHEK2   430000 perm   163 sec   (2634 perm/sec)   p_kst 1.906977e-04   p_cons 5.730581e-01   p_joint 1.051163e-03

Joint ci ratio: 1.822789e-01	ci left: 9.542999e-04	ci right 1.147822e-03	k: 461	n:440000
Cons ci ratio: 5.101515e-03	ci left: 5.715323e-01	ci right 5.744577e-01	k: 252118	n:440000
KS ci ratio: 4.226627e-01	ci left: 1.543096e-04	ci right 2.388669e-04	k: 85	n:440000
CHEK2   440000 perm   168 sec   (2612 perm/sec)   p_kst 1.931818e-04   p_cons 5.729955e-01   p_joint 1.047727e-03

Joint ci ratio: 1.909595e-01	ci left: 8.462316e-04	ci right 1.026960e-03	k: 420	n:450000
Cons ci ratio: 5.045933e-03	ci left: 5.714109e-01	ci right 5.743037e-01	k: 257786	n:450000
KS ci ratio: 4.226636e-01	ci left: 1.508804e-04	ci right 2.335588e-04	k: 85	n:450000
CHEK2   450000 perm   174 sec   (2590 perm/sec)   p_kst 1.888889e-04   p_cons 5.728578e-01   p_joint 9.333333e-04

Joint ci ratio: 2.073877e-01	ci left: 6.956255e-04	ci right 8.585947e-04	k: 356	n:460000
Cons ci ratio: 4.990931e-03	ci left: 5.714124e-01	ci right 5.742736e-01	k: 263508	n:460000
KS ci ratio: 4.178330e-01	ci left: 1.514884e-04	ci right 2.332865e-04	k: 87	n:460000
CHEK2   460000 perm   179 sec   (2567 perm/sec)   p_kst 1.891304e-04   p_cons 5.728435e-01   p_joint 7.739130e-04

Joint ci ratio: 2.088582e-01	ci left: 6.707402e-04	ci right 8.291360e-04	k: 351	n:470000
Cons ci ratio: 4.938376e-03	ci left: 5.713460e-01	ci right 5.741765e-01	k: 269198	n:470000
KS ci ratio: 4.154794e-01	ci left: 1.501698e-04	ci right 2.306726e-04	k: 88	n:470000
CHEK2   470000 perm   185 sec   (2545 perm/sec)   p_kst 1.872340e-04   p_cons 5.727617e-01   p_joint 7.468085e-04

Joint ci ratio: 2.173686e-01	ci left: 6.035150e-04	ci right 7.526190e-04	k: 324	n:480000
Cons ci ratio: 4.743799e-03	ci left: 5.858223e-01	ci right 5.886100e-01	k: 281864	n:480000
KS ci ratio: 4.154802e-01	ci left: 1.470412e-04	ci right 2.258670e-04	k: 88	n:480000
CHEK2   480000 perm   190 sec   (2523 perm/sec)   p_kst 1.833333e-04   p_cons 5.872167e-01   p_joint 6.750000e-04

Joint ci ratio: 1.584872e-01	ci left: 1.148108e-03	ci right 1.347660e-03	k: 610	n:490000
Cons ci ratio: 4.696056e-03	ci left: 5.857424e-01	ci right 5.885015e-01	k: 287690	n:490000
KS ci ratio: 4.108891e-01	ci left: 1.476977e-04	ci right 2.257611e-04	k: 90	n:490000
CHEK2   490000 perm   196 sec   (2500 perm/sec)   p_kst 1.836735e-04   p_cons 5.871224e-01   p_joint 1.244898e-03

Joint ci ratio: 1.577157e-01	ci left: 1.136671e-03	ci right 1.333182e-03	k: 616	n:500000
Cons ci ratio: 4.647847e-03	ci left: 5.858618e-01	ci right 5.885931e-01	k: 293614	n:500000
KS ci ratio: 4.108898e-01	ci left: 1.447437e-04	ci right 2.212460e-04	k: 90	n:500000
CHEK2   500000 perm   202 sec   (2477 perm/sec)   p_kst 1.800000e-04   p_cons 5.872280e-01   p_joint 1.232000e-03

Joint ci ratio: 1.569554e-01	ci left: 1.125684e-03	ci right 1.319269e-03	k: 622	n:510000
Cons ci ratio: 4.602041e-03	ci left: 5.858767e-01	ci right 5.885811e-01	k: 299487	n:510000
KS ci ratio: 4.086510e-01	ci left: 1.436642e-04	ci right 2.190697e-04	k: 91	n:510000
CHEK2   510000 perm   210 sec   (2434 perm/sec)   p_kst 1.784314e-04   p_cons 5.872294e-01   p_joint 1.219608e-03

Joint ci ratio: 1.558343e-01	ci left: 1.120667e-03	ci right 1.311883e-03	k: 631	n:520000
Cons ci ratio: 4.557455e-03	ci left: 5.859027e-01	ci right 5.885809e-01	k: 305366	n:520000
KS ci ratio: 4.086517e-01	ci left: 1.409014e-04	ci right 2.148569e-04	k: 91	n:520000
CHEK2   520000 perm   218 sec   (2386 perm/sec)   p_kst 1.750000e-04   p_cons 5.872423e-01   p_joint 1.213462e-03

Joint ci ratio: 1.557128e-01	ci left: 1.101334e-03	ci right 1.289092e-03	k: 632	n:530000
Cons ci ratio: 4.513156e-03	ci left: 5.860336e-01	ci right 5.886862e-01	k: 311301	n:530000
KS ci ratio: 4.021471e-01	ci left: 1.433260e-04	ci right 2.170376e-04	k: 94	n:530000
CHEK2   530000 perm   224 sec   (2367 perm/sec)   p_kst 1.773585e-04   p_cons 5.873604e-01   p_joint 1.192453e-03

Joint ci ratio: 1.540186e-01	ci left: 1.105861e-03	ci right 1.292150e-03	k: 646	n:540000
Cons ci ratio: 4.471541e-03	ci left: 5.860059e-01	ci right 5.886339e-01	k: 317153	n:540000
KS ci ratio: 4.000474e-01	ci left: 1.423368e-04	ci right 2.150561e-04	k: 95	n:540000
CHEK2   540000 perm   230 sec   (2348 perm/sec)   p_kst 1.759259e-04   p_cons 5.873204e-01   p_joint 1.196296e-03

Joint ci ratio: 1.549826e-01	ci left: 1.071770e-03	ci right 1.253551e-03	k: 638	n:550000
Cons ci ratio: 4.430691e-03	ci left: 5.860194e-01	ci right 5.886234e-01	k: 323027	n:550000
KS ci ratio: 3.959442e-01	ci left: 1.430213e-04	ci right 2.151445e-04	k: 97	n:550000
CHEK2   550000 perm   236 sec   (2328 perm/sec)   p_kst 1.763636e-04   p_cons 5.873218e-01   p_joint 1.160000e-03

Joint ci ratio: 1.535474e-01	ci left: 1.073232e-03	ci right 1.253421e-03	k: 650	n:560000
Cons ci ratio: 4.390310e-03	ci left: 5.861021e-01	ci right 5.886827e-01	k: 328940	n:560000
KS ci ratio: 3.939396e-01	ci left: 1.420757e-04	ci right 2.132649e-04	k: 98	n:560000
CHEK2   560000 perm   243 sec   (2306 perm/sec)   p_kst 1.750000e-04   p_cons 5.873929e-01   p_joint 1.160714e-03

Joint ci ratio: 1.622666e-01	ci left: 9.398105e-04	ci right 1.107433e-03	k: 582	n:570000
Cons ci ratio: 4.351265e-03	ci left: 5.861540e-01	ci right 5.887118e-01	k: 334837	n:570000
KS ci ratio: 3.939403e-01	ci left: 1.395831e-04	ci right 2.095234e-04	k: 98	n:570000
CHEK2   570000 perm   250 sec   (2282 perm/sec)   p_kst 1.719298e-04   p_cons 5.874333e-01   p_joint 1.021053e-03

Joint ci ratio: 1.747082e-01	ci left: 7.914786e-04	ci right 9.446122e-04	k: 502	n:580000
Cons ci ratio: 4.312921e-03	ci left: 5.862404e-01	ci right 5.887760e-01	k: 340755	n:580000
KS ci ratio: 3.919659e-01	ci left: 1.387302e-04	ci right 2.078047e-04	k: 99	n:580000
CHEK2   580000 perm   256 sec   (2263 perm/sec)   p_kst 1.706897e-04   p_cons 5.875086e-01   p_joint 8.655172e-04

Joint ci ratio: 1.728283e-01	ci left: 7.958971e-04	ci right 9.480558e-04	k: 513	n:590000
Cons ci ratio: 4.277652e-03	ci left: 5.860883e-01	ci right 5.886024e-01	k: 346534	n:590000
KS ci ratio: 3.919664e-01	ci left: 1.363788e-04	ci right 2.042826e-04	k: 99	n:590000
CHEK2   590000 perm   263 sec   (2245 perm/sec)   p_kst 1.677966e-04   p_cons 5.873458e-01   p_joint 8.694915e-04

Joint ci ratio: 1.766546e-01	ci left: 7.475673e-04	ci right 8.939884e-04	k: 491	n:600000
Cons ci ratio: 4.241818e-03	ci left: 5.861031e-01	ci right 5.885961e-01	k: 352410	n:600000
KS ci ratio: 3.843540e-01	ci left: 1.401220e-04	ci right 2.081920e-04	k: 103	n:600000
CHEK2   600000 perm   269 sec   (2230 perm/sec)   p_kst 1.716667e-04   p_cons 5.873500e-01   p_joint 8.183333e-04

Joint ci ratio: 1.745384e-01	ci left: 7.541199e-04	ci right 8.998685e-04	k: 503	n:610000
Cons ci ratio: 4.207667e-03	ci left: 5.860256e-01	ci right 5.884982e-01	k: 358230	n:610000
KS ci ratio: 3.754340e-01	ci left: 1.452391e-04	ci right 2.137546e-04	k: 108	n:610000
CHEK2   610000 perm   276 sec   (2214 perm/sec)   p_kst 1.770492e-04   p_cons 5.872623e-01   p_joint 8.245902e-04

Joint ci ratio: 1.759426e-01	ci left: 7.296185e-04	ci right 8.718869e-04	k: 495	n:620000
Cons ci ratio: 4.173105e-03	ci left: 5.860927e-01	ci right 5.885452e-01	k: 364138	n:620000
KS ci ratio: 3.754346e-01	ci left: 1.428965e-04	ci right 2.103070e-04	k: 108	n:620000
CHEK2   620000 perm   282 sec   (2198 perm/sec)   p_kst 1.741935e-04   p_cons 5.873194e-01   p_joint 7.983871e-04

Joint ci ratio: 1.762998e-01	ci left: 7.150022e-04	ci right 8.547337e-04	k: 493	n:630000
Cons ci ratio: 4.140574e-03	ci left: 5.860180e-01	ci right 5.884510e-01	k: 369958	n:630000
KS ci ratio: 3.754351e-01	ci left: 1.406282e-04	ci right 2.069689e-04	k: 108	n:630000
CHEK2   630000 perm   289 sec   (2183 perm/sec)   p_kst 1.714286e-04   p_cons 5.872349e-01   p_joint 7.825397e-04

Joint ci ratio: 1.747153e-01	ci left: 7.172751e-04	ci right 8.560580e-04	k: 502	n:640000
Cons ci ratio: 4.109136e-03	ci left: 5.859051e-01	ci right 5.883191e-01	k: 375752	n:640000
KS ci ratio: 3.737249e-01	ci left: 1.398463e-04	ci right 2.054440e-04	k: 109	n:640000
CHEK2   640000 perm   295 sec   (2168 perm/sec)   p_kst 1.703125e-04   p_cons 5.871125e-01   p_joint 7.843750e-04

Joint ci ratio: 1.731728e-01	ci left: 7.194835e-04	ci right 8.573362e-04	k: 511	n:650000
Cons ci ratio: 4.076152e-03	ci left: 5.860635e-01	ci right 5.884588e-01	k: 381720	n:650000
KS ci ratio: 3.720379e-01	ci left: 1.390891e-04	ci right 2.039653e-04	k: 110	n:650000
CHEK2   650000 perm   302 sec   (2151 perm/sec)   p_kst 1.692308e-04   p_cons 5.872615e-01   p_joint 7.861538e-04

Joint ci ratio: 1.740263e-01	ci left: 7.013351e-04	ci right 8.364424e-04	k: 506	n:660000
Cons ci ratio: 4.044770e-03	ci left: 5.861187e-01	ci right 5.884957e-01	k: 387623	n:660000
KS ci ratio: 3.703735e-01	ci left: 1.383555e-04	ci right 2.025308e-04	k: 111	n:660000
CHEK2   660000 perm   309 sec   (2136 perm/sec)   p_kst 1.681818e-04   p_cons 5.873076e-01   p_joint 7.666667e-04

Joint ci ratio: 1.747184e-01	ci left: 6.851573e-04	ci right 8.177283e-04	k: 502	n:670000
Cons ci ratio: 4.014027e-03	ci left: 5.861812e-01	ci right 5.885404e-01	k: 393532	n:670000
KS ci ratio: 3.655102e-01	ci left: 1.403541e-04	ci right 2.043977e-04	k: 114	n:670000
CHEK2   670000 perm   316 sec   (2121 perm/sec)   p_kst 1.701493e-04   p_cons 5.873612e-01   p_joint 7.492537e-04

Joint ci ratio: 1.770236e-01	ci left: 6.568044e-04	ci right 7.857457e-04	k: 489	n:680000
Cons ci ratio: 3.984278e-03	ci left: 5.862052e-01	ci right 5.885469e-01	k: 399416	n:680000
KS ci ratio: 3.655107e-01	ci left: 1.382901e-04	ci right 2.013919e-04	k: 114	n:680000
CHEK2   680000 perm   323 sec   (2107 perm/sec)   p_kst 1.676471e-04   p_cons 5.873765e-01   p_joint 7.191176e-04

Joint ci ratio: 1.757726e-01	ci left: 6.569826e-04	ci right 7.849505e-04	k: 496	n:690000
Cons ci ratio: 3.955334e-03	ci left: 5.862098e-01	ci right 5.885344e-01	k: 405287	n:690000
KS ci ratio: 3.639320e-01	ci left: 1.376023e-04	ci right 2.000548e-04	k: 115	n:690000
CHEK2   690000 perm   330 sec   (2092 perm/sec)   p_kst 1.666667e-04   p_cons 5.873725e-01   p_joint 7.188406e-04

Joint ci ratio: 1.738586e-01	ci left: 6.626240e-04	ci right 7.901379e-04	k: 507	n:700000
Cons ci ratio: 3.926525e-03	ci left: 5.862742e-01	ci right 5.885822e-01	k: 411200	n:700000
KS ci ratio: 3.608346e-01	ci left: 1.382336e-04	ci right 2.003130e-04	k: 117	n:700000
CHEK2   700000 perm   337 sec   (2078 perm/sec)   p_kst 1.671429e-04   p_cons 5.874286e-01   p_joint 7.242857e-04

Joint ci ratio: 1.723385e-01	ci left: 6.654182e-04	ci right 7.922338e-04	k: 516	n:710000
Cons ci ratio: 3.898564e-03	ci left: 5.863088e-01	ci right 5.886004e-01	k: 417093	n:710000
KS ci ratio: 3.578149e-01	ci left: 1.388493e-04	ci right 2.005618e-04	k: 119	n:710000
CHEK2   710000 perm   344 sec   (2064 perm/sec)   p_kst 1.676056e-04   p_cons 5.874549e-01   p_joint 7.267606e-04

Joint ci ratio: 1.708576e-01	ci left: 6.681395e-04	ci right 7.942668e-04	k: 525	n:720000
Cons ci ratio: 3.871457e-03	ci left: 5.863091e-01	ci right 5.885847e-01	k: 422962	n:720000
KS ci ratio: 3.505848e-01	ci left: 1.432475e-04	ci right 2.053359e-04	k: 124	n:720000
CHEK2   720000 perm   351 sec   (2050 perm/sec)   p_kst 1.722222e-04   p_cons 5.874472e-01   p_joint 7.291667e-04

Joint ci ratio: 1.736902e-01	ci left: 6.367024e-04	ci right 7.590968e-04	k: 508	n:730000
Cons ci ratio: 3.845680e-03	ci left: 5.862121e-01	ci right 5.884721e-01	k: 428760	n:730000
KS ci ratio: 3.491910e-01	ci left: 1.425347e-04	ci right 2.040129e-04	k: 125	n:730000
CHEK2   730000 perm   358 sec   (2037 perm/sec)   p_kst 1.712329e-04   p_cons 5.873425e-01   p_joint 6.958904e-04

Joint ci ratio: 1.984445e-01	ci left: 4.747404e-04	ci right 5.805847e-04	k: 389	n:740000
Cons ci ratio: 3.819697e-03	ci left: 5.862084e-01	ci right 5.884531e-01	k: 434625	n:740000
KS ci ratio: 3.491914e-01	ci left: 1.406085e-04	ci right 2.012560e-04	k: 125	n:740000
CHEK2   740000 perm   366 sec   (2024 perm/sec)   p_kst 1.689189e-04   p_cons 5.873311e-01   p_joint 5.256757e-04

Joint ci ratio: 1.969353e-01	ci left: 4.760146e-04	ci right 5.812390e-04	k: 395	n:750000
Cons ci ratio: 3.794109e-03	ci left: 5.862208e-01	ci right 5.884505e-01	k: 440502	n:750000
KS ci ratio: 3.491918e-01	ci left: 1.387337e-04	ci right 1.985726e-04	k: 125	n:750000
CHEK2   750000 perm   373 sec   (2011 perm/sec)   p_kst 1.666667e-04   p_cons 5.873360e-01   p_joint 5.266667e-04

Joint ci ratio: 1.974354e-01	ci left: 4.672493e-04	ci right 5.708300e-04	k: 393	n:760000
Cons ci ratio: 3.768782e-03	ci left: 5.862646e-01	ci right 5.884795e-01	k: 446403	n:760000
KS ci ratio: 3.491922e-01	ci left: 1.369082e-04	ci right 1.959599e-04	k: 125	n:760000
CHEK2   760000 perm   380 sec   (1998 perm/sec)   p_kst 1.644737e-04   p_cons 5.873724e-01   p_joint 5.171053e-04

Joint ci ratio: 1.961945e-01	ci left: 4.673547e-04	ci right 5.702298e-04	k: 398	n:770000
Cons ci ratio: 3.744839e-03	ci left: 5.861929e-01	ci right 5.883935e-01	k: 452216	n:770000
KS ci ratio: 3.478148e-01	ci left: 1.363152e-04	ci right 1.948269e-04	k: 126	n:770000
CHEK2   770000 perm   388 sec   (1985 perm/sec)   p_kst 1.636364e-04   p_cons 5.872935e-01   p_joint 5.168831e-04

Joint ci ratio: 1.949767e-01	ci left: 4.674593e-04	ci right 5.696429e-04	k: 403	n:780000
Cons ci ratio: 3.721080e-03	ci left: 5.861577e-01	ci right 5.883442e-01	k: 458056	n:780000
KS ci ratio: 3.451080e-01	ci left: 1.369086e-04	ci right 1.951155e-04	k: 128	n:780000
CHEK2   780000 perm   395 sec   (1972 perm/sec)   p_kst 1.641026e-04   p_cons 5.872513e-01   p_joint 5.166667e-04

Joint ci ratio: 1.930741e-01	ci left: 4.711769e-04	ci right 5.730500e-04	k: 411	n:790000
Cons ci ratio: 3.696272e-03	ci left: 5.863198e-01	ci right 5.884922e-01	k: 464051	n:790000
KS ci ratio: 3.424634e-01	ci left: 1.374887e-04	ci right 1.953950e-04	k: 130	n:790000
CHEK2   790000 perm   403 sec   (1960 perm/sec)   p_kst 1.645570e-04   p_cons 5.874063e-01   p_joint 5.202532e-04

Joint ci ratio: 1.921437e-01	ci left: 4.700461e-04	ci right 5.711277e-04	k: 415	n:800000
Cons ci ratio: 3.673827e-03	ci left: 5.862302e-01	ci right 5.883891e-01	k: 469848	n:800000
KS ci ratio: 3.398786e-01	ci left: 1.380559e-04	ci right 1.956659e-04	k: 132	n:800000
CHEK2   800000 perm   411 sec   (1948 perm/sec)   p_kst 1.650000e-04   p_cons 5.873100e-01   p_joint 5.187500e-04

Joint ci ratio: 1.907728e-01	ci left: 4.712954e-04	ci right 5.718388e-04	k: 421	n:810000
Cons ci ratio: 3.650727e-03	ci left: 5.862837e-01	ci right 5.884292e-01	k: 475759	n:810000
KS ci ratio: 3.386082e-01	ci left: 1.374809e-04	ci right 1.945897e-04	k: 133	n:810000
CHEK2   810000 perm   418 sec   (1936 perm/sec)   p_kst 1.641975e-04   p_cons 5.873568e-01   p_joint 5.197531e-04

Joint ci ratio: 1.903227e-01	ci left: 4.678705e-04	ci right 5.674205e-04	k: 423	n:820000
Cons ci ratio: 3.628147e-03	ci left: 5.863238e-01	ci right 5.884561e-01	k: 481660	n:820000
KS ci ratio: 3.386085e-01	ci left: 1.358043e-04	ci right 1.922167e-04	k: 133	n:820000
CHEK2   820000 perm   426 sec   (1924 perm/sec)   p_kst 1.621951e-04   p_cons 5.873902e-01   p_joint 5.158537e-04

Joint ci ratio: 1.914561e-01	ci left: 4.564970e-04	ci right 5.542728e-04	k: 418	n:830000
Cons ci ratio: 3.605991e-03	ci left: 5.863617e-01	ci right 5.884811e-01	k: 487560	n:830000
KS ci ratio: 3.386089e-01	ci left: 1.341681e-04	ci right 1.899008e-04	k: 133	n:830000
CHEK2   830000 perm   434 sec   (1912 perm/sec)   p_kst 1.602410e-04   p_cons 5.874217e-01   p_joint 5.036145e-04

Joint ci ratio: 1.905488e-01	ci left: 4.555967e-04	ci right 5.526637e-04	k: 422	n:840000
Cons ci ratio: 3.583936e-03	ci left: 5.864392e-01	ci right 5.885459e-01	k: 493494	n:840000
KS ci ratio: 3.373526e-01	ci left: 1.336603e-04	ci right 1.889313e-04	k: 134	n:840000
CHEK2   840000 perm   442 sec   (1901 perm/sec)   p_kst 1.595238e-04   p_cons 5.874929e-01   p_joint 5.023810e-04

Joint ci ratio: 1.892115e-01	ci left: 4.569601e-04	ci right 5.535557e-04	k: 428	n:850000
Cons ci ratio: 3.563250e-03	ci left: 5.863831e-01	ci right 5.884774e-01	k: 499316	n:850000
KS ci ratio: 3.348810e-01	ci left: 1.342422e-04	ci right 1.892593e-04	k: 136	n:850000
CHEK2   850000 perm   450 sec   (1890 perm/sec)   p_kst 1.600000e-04   p_cons 5.874306e-01   p_joint 5.035294e-04

Joint ci ratio: 1.901008e-01	ci left: 4.472160e-04	ci right 5.422475e-04	k: 424	n:860000
Cons ci ratio: 3.542305e-03	ci left: 5.864122e-01	ci right 5.884942e-01	k: 505210	n:860000
KS ci ratio: 3.348813e-01	ci left: 1.326812e-04	ci right 1.870587e-04	k: 136	n:860000
CHEK2   860000 perm   458 sec   (1878 perm/sec)   p_kst 1.581395e-04   p_cons 5.874535e-01   p_joint 4.930233e-04

Joint ci ratio: 1.883362e-01	ci left: 4.508355e-04	ci right 5.456452e-04	k: 432	n:870000
Cons ci ratio: 3.521099e-03	ci left: 5.865268e-01	ci right 5.885968e-01	k: 511179	n:870000
KS ci ratio: 3.300966e-01	ci left: 1.353701e-04	ci right 1.898886e-04	k: 140	n:870000
CHEK2   870000 perm   466 sec   (1867 perm/sec)   p_kst 1.609195e-04   p_cons 5.875621e-01   p_joint 4.965517e-04

Joint ci ratio: 1.874724e-01	ci left: 4.500440e-04	ci right 5.442037e-04	k: 436	n:880000
Cons ci ratio: 3.501156e-03	ci left: 5.865161e-01	ci right 5.885743e-01	k: 517040	n:880000
KS ci ratio: 3.300969e-01	ci left: 1.338318e-04	ci right 1.877308e-04	k: 140	n:880000
CHEK2   880000 perm   474 sec   (1856 perm/sec)   p_kst 1.590909e-04   p_cons 5.875455e-01   p_joint 4.954545e-04

Joint ci ratio: 1.864090e-01	ci left: 4.503424e-04	ci right 5.439696e-04	k: 441	n:890000
Cons ci ratio: 3.481612e-03	ci left: 5.864966e-01	ci right 5.885432e-01	k: 522893	n:890000
KS ci ratio: 3.266401e-01	ci left: 1.354210e-04	ci right 1.892691e-04	k: 143	n:890000
CHEK2   890000 perm   482 sec   (1845 perm/sec)   p_kst 1.606742e-04   p_cons 5.875202e-01   p_joint 4.955056e-04

Joint ci ratio: 1.855713e-01	ci left: 4.495761e-04	ci right 5.425767e-04	k: 445	n:900000
Cons ci ratio: 3.462194e-03	ci left: 5.865055e-01	ci right 5.885406e-01	k: 528771	n:900000
KS ci ratio: 3.255119e-01	ci left: 1.349365e-04	ci right 1.883679e-04	k: 144	n:900000
CHEK2   900000 perm   491 sec   (1834 perm/sec)   p_kst 1.600000e-04   p_cons 5.875233e-01   p_joint 4.944444e-04

Joint ci ratio: 1.853640e-01	ci left: 4.456835e-04	ci right 5.377643e-04	k: 446	n:910000
Cons ci ratio: 3.443081e-03	ci left: 5.865163e-01	ci right 5.885403e-01	k: 534651	n:910000
KS ci ratio: 3.243953e-01	ci left: 1.344630e-04	ci right 1.874862e-04	k: 145	n:910000
CHEK2   910000 perm   499 sec   (1823 perm/sec)   p_kst 1.593407e-04   p_cons 5.875286e-01   p_joint 4.901099e-04

Joint ci ratio: 1.843359e-01	ci left: 4.460225e-04	ci right 5.376050e-04	k: 451	n:920000
Cons ci ratio: 3.424635e-03	ci left: 5.864769e-01	ci right 5.884899e-01	k: 540485	n:920000
KS ci ratio: 3.211127e-01	ci left: 1.359982e-04	ci right 1.889724e-04	k: 148	n:920000
CHEK2   920000 perm   508 sec   (1811 perm/sec)   p_kst 1.608696e-04   p_cons 5.874837e-01   p_joint 4.902174e-04

Joint ci ratio: 1.829247e-01	ci left: 4.484075e-04	ci right 5.396967e-04	k: 458	n:930000
Cons ci ratio: 3.406467e-03	ci left: 5.864406e-01	ci right 5.884427e-01	k: 546321	n:930000
KS ci ratio: 3.200407e-01	ci left: 1.355246e-04	ci right 1.881019e-04	k: 149	n:930000
CHEK2   930000 perm   517 sec   (1797 perm/sec)   p_kst 1.602151e-04   p_cons 5.874419e-01   p_joint 4.924731e-04

Joint ci ratio: 1.823300e-01	ci left: 4.466827e-04	ci right 5.372926e-04	k: 461	n:940000
Cons ci ratio: 3.388711e-03	ci left: 5.863870e-01	ci right 5.883785e-01	k: 552140	n:940000
KS ci ratio: 3.200410e-01	ci left: 1.340828e-04	ci right 1.861009e-04	k: 149	n:940000
CHEK2   940000 perm   526 sec   (1787 perm/sec)   p_kst 1.585106e-04   p_cons 5.873830e-01   p_joint 4.904255e-04

Joint ci ratio: 1.813513e-01	ci left: 4.470044e-04	ci right 5.371393e-04	k: 466	n:950000
Cons ci ratio: 3.371259e-03	ci left: 5.863303e-01	ci right 5.883113e-01	k: 557955	n:950000
KS ci ratio: 3.179284e-01	ci left: 1.346081e-04	ci right 1.864152e-04	k: 151	n:950000
CHEK2   950000 perm   535 sec   (1776 perm/sec)   p_kst 1.589474e-04   p_cons 5.873211e-01   p_joint 4.905263e-04

Joint ci ratio: 1.801973e-01	ci left: 4.483153e-04	ci right 5.380766e-04	k: 472	n:960000
Cons ci ratio: 3.353519e-03	ci left: 5.863550e-01	ci right 5.883257e-01	k: 563847	n:960000
KS ci ratio: 3.158571e-01	ci left: 1.351236e-04	ci right 1.867218e-04	k: 153	n:960000
CHEK2   960000 perm   544 sec   (1765 perm/sec)   p_kst 1.593750e-04   p_cons 5.873406e-01   p_joint 4.916667e-04

Joint ci ratio: 1.788783e-01	ci left: 4.505858e-04	ci right 5.400698e-04	k: 479	n:970000
Cons ci ratio: 3.335666e-03	ci left: 5.864360e-01	ci right 5.883964e-01	k: 569794	n:970000
KS ci ratio: 3.118329e-01	ci left: 1.375296e-04	ci right 1.892442e-04	k: 157	n:970000
CHEK2   970000 perm   553 sec   (1753 perm/sec)   p_kst 1.618557e-04   p_cons 5.874165e-01   p_joint 4.938144e-04

Joint ci ratio: 1.775879e-01	ci left: 4.528122e-04	ci right 5.420200e-04	k: 486	n:980000
Cons ci ratio: 3.318696e-03	ci left: 5.864276e-01	ci right 5.883780e-01	k: 575655	n:980000
KS ci ratio: 3.108508e-01	ci left: 1.370669e-04	ci right 1.884131e-04	k: 158	n:980000
CHEK2   980000 perm   562 sec   (1743 perm/sec)   p_kst 1.612245e-04   p_cons 5.874031e-01   p_joint 4.959184e-04

Joint ci ratio: 1.768632e-01	ci left: 4.520995e-04	ci right 5.407645e-04	k: 490	n:990000
Cons ci ratio: 3.302161e-03	ci left: 5.863931e-01	ci right 5.883337e-01	k: 581490	n:990000
KS ci ratio: 3.108511e-01	ci left: 1.356824e-04	ci right 1.865099e-04	k: 158	n:990000
CHEK2   990000 perm   571 sec   (1733 perm/sec)   p_kst 1.595960e-04   p_cons 5.873636e-01   p_joint 4.949495e-04

Joint ci ratio: 1.817433e-01	ci left: 4.227446e-04	ci right 5.081922e-04	k: 464	n:1000000
Cons ci ratio: 3.285877e-03	ci left: 5.863583e-01	ci right 5.882892e-01	k: 587324	n:1000000
KS ci ratio: 3.098783e-01	ci left: 1.352477e-04	ci right 1.857225e-04	k: 159	n:1000000
CHEK2   1000000 perm   580 sec   (1723 perm/sec)   p_kst 1.590000e-04   p_cons 5.873240e-01   p_joint 4.640000e-04

Joint ci ratio: 1.807740e-01	ci left: 4.232849e-04	ci right 5.083354e-04	k: 469	n:1010000
Cons ci ratio: 3.269799e-03	ci left: 5.863292e-01	ci right 5.882505e-01	k: 593163	n:1010000
KS ci ratio: 3.070132e-01	ci left: 1.366490e-04	ci right 1.870831e-04	k: 162	n:1010000
CHEK2   1010000 perm   590 sec   (1713 perm/sec)   p_kst 1.603960e-04   p_cons 5.872901e-01   p_joint 4.643564e-04

Joint ci ratio: 1.796309e-01	ci left: 4.247521e-04	ci right 5.094991e-04	k: 475	n:1020000
Cons ci ratio: 3.253848e-03	ci left: 5.863164e-01	ci right 5.882282e-01	k: 599018	n:1020000
KS ci ratio: 3.051468e-01	ci left: 1.371196e-04	ci right 1.873598e-04	k: 164	n:1020000
CHEK2   1020000 perm   599 sec   (1703 perm/sec)   p_kst 1.607843e-04   p_cons 5.872725e-01   p_joint 4.656863e-04

Joint ci ratio: 1.785092e-01	ci left: 4.261925e-04	ci right 5.106386e-04	k: 481	n:1030000
Cons ci ratio: 3.237663e-03	ci left: 5.863737e-01	ci right 5.882762e-01	k: 604945	n:1030000
KS ci ratio: 3.042263e-01	ci left: 1.366850e-04	ci right 1.865857e-04	k: 165	n:1030000
CHEK2   1030000 perm   608 sec   (1693 perm/sec)   p_kst 1.601942e-04   p_cons 5.873252e-01   p_joint 4.669903e-04

Joint ci ratio: 1.775905e-01	ci left: 4.266879e-04	ci right 5.107503e-04	k: 486	n:1040000
Cons ci ratio: 3.222726e-03	ci left: 5.862781e-01	ci right 5.881715e-01	k: 610714	n:1040000
KS ci ratio: 3.015138e-01	ci left: 1.380361e-04	ci right 1.878947e-04	k: 168	n:1040000
CHEK2   1040000 perm   618 sec   (1684 perm/sec)   p_kst 1.615385e-04   p_cons 5.872250e-01   p_joint 4.673077e-04

Joint ci ratio: 1.829298e-01	ci left: 3.971599e-04	ci right 4.780184e-04	k: 458	n:1050000
Cons ci ratio: 3.207180e-03	ci left: 5.863071e-01	ci right 5.881914e-01	k: 616612	n:1050000
KS ci ratio: 3.006258e-01	ci left: 1.376020e-04	ci right 1.871293e-04	k: 169	n:1050000
CHEK2   1050000 perm   627 sec   (1674 perm/sec)   p_kst 1.609524e-04   p_cons 5.872495e-01   p_joint 4.361905e-04

Joint ci ratio: 1.813559e-01	ci left: 4.006163e-04	ci right 4.813996e-04	k: 466	n:1060000
Cons ci ratio: 3.192100e-03	ci left: 5.862988e-01	ci right 5.881743e-01	k: 622471	n:1060000
KS ci ratio: 2.997456e-01	ci left: 1.371762e-04	ci right 1.863782e-04	k: 170	n:1060000
CHEK2   1060000 perm   637 sec   (1665 perm/sec)   p_kst 1.603774e-04   p_cons 5.872368e-01   p_joint 4.396226e-04

Joint ci ratio: 1.803927e-01	ci left: 4.013335e-04	ci right 4.817848e-04	k: 471	n:1070000
Cons ci ratio: 3.176949e-03	ci left: 5.863337e-01	ci right 5.882004e-01	k: 628376	n:1070000
KS ci ratio: 2.988730e-01	ci left: 1.367586e-04	ci right 1.856409e-04	k: 171	n:1070000
CHEK2   1070000 perm   646 sec   (1656 perm/sec)   p_kst 1.598131e-04   p_cons 5.872673e-01   p_joint 4.401869e-04

Joint ci ratio: 1.794447e-01	ci left: 4.020386e-04	ci right 4.821617e-04	k: 476	n:1080000
Cons ci ratio: 3.162398e-03	ci left: 5.863087e-01	ci right 5.881667e-01	k: 634217	n:1080000
KS ci ratio: 2.980081e-01	ci left: 1.363489e-04	ci right 1.849171e-04	k: 172	n:1080000
CHEK2   1080000 perm   656 sec   (1646 perm/sec)   p_kst 1.592593e-04   p_cons 5.872380e-01   p_joint 4.407407e-04

Joint ci ratio: 1.785115e-01	ci left: 4.027319e-04	ci right 4.825306e-04	k: 481	n:1090000
Cons ci ratio: 3.148117e-03	ci left: 5.862732e-01	ci right 5.881227e-01	k: 640046	n:1090000
KS ci ratio: 2.963002e-01	ci left: 1.367961e-04	ci right 1.851918e-04	k: 174	n:1090000
CHEK2   1090000 perm   666 sec   (1638 perm/sec)   p_kst 1.596330e-04   p_cons 5.871982e-01   p_joint 4.412844e-04

Joint ci ratio: 1.779587e-01	ci left: 4.016763e-04	ci right 4.809928e-04	k: 484	n:1100000
Cons ci ratio: 3.133904e-03	ci left: 5.862574e-01	ci right 5.880985e-01	k: 645896	n:1100000
KS ci ratio: 2.946214e-01	ci left: 1.372359e-04	ci right 1.854608e-04	k: 176	n:1100000
CHEK2   1100000 perm   676 sec   (1628 perm/sec)   p_kst 1.600000e-04   p_cons 5.871782e-01   p_joint 4.400000e-04

Joint ci ratio: 1.774110e-01	ci left: 4.006400e-04	ci right 4.794823e-04	k: 487	n:1110000
Cons ci ratio: 3.119678e-03	ci left: 5.862735e-01	ci right 5.881062e-01	k: 651781	n:1110000
KS ci ratio: 2.937927e-01	ci left: 1.368340e-04	ci right 1.847572e-04	k: 177	n:1110000
CHEK2   1110000 perm   685 sec   (1620 perm/sec)   p_kst 1.594595e-04   p_cons 5.871901e-01   p_joint 4.387387e-04

Joint ci ratio: 1.761519e-01	ci left: 4.030364e-04	ci right 4.817275e-04	k: 494	n:1120000
Cons ci ratio: 3.105885e-03	ci left: 5.862518e-01	ci right 5.880763e-01	k: 657624	n:1120000
KS ci ratio: 2.921559e-01	ci left: 1.372667e-04	ci right 1.850241e-04	k: 179	n:1120000
CHEK2   1120000 perm   695 sec   (1611 perm/sec)   p_kst 1.598214e-04   p_cons 5.871643e-01   p_joint 4.410714e-04

Joint ci ratio: 1.788846e-01	ci left: 3.867848e-04	ci right 4.636013e-04	k: 479	n:1130000
Cons ci ratio: 3.092161e-03	ci left: 5.862482e-01	ci right 5.880646e-01	k: 663487	n:1130000
KS ci ratio: 2.905462e-01	ci left: 1.376926e-04	ci right 1.852856e-04	k: 181	n:1130000
CHEK2   1130000 perm   705 sec   (1602 perm/sec)   p_kst 1.601770e-04   p_cons 5.871566e-01   p_joint 4.238938e-04

Joint ci ratio: 1.779601e-01	ci left: 3.875821e-04	ci right 4.641162e-04	k: 484	n:1140000
Cons ci ratio: 3.078199e-03	ci left: 5.863105e-01	ci right 5.881189e-01	k: 669425	n:1140000
KS ci ratio: 2.889628e-01	ci left: 1.381116e-04	ci right 1.855419e-04	k: 183	n:1140000
CHEK2   1140000 perm   716 sec   (1593 perm/sec)   p_kst 1.605263e-04   p_cons 5.872149e-01   p_joint 4.245614e-04

Joint ci ratio: 1.770497e-01	ci left: 3.883665e-04	ci right 4.646212e-04	k: 489	n:1150000
Cons ci ratio: 3.064908e-03	ci left: 5.862952e-01	ci right 5.880957e-01	k: 675275	n:1150000
KS ci ratio: 2.866354e-01	ci left: 1.393311e-04	ci right 1.867249e-04	k: 186	n:1150000
CHEK2   1150000 perm   726 sec   (1583 perm/sec)   p_kst 1.617391e-04   p_cons 5.871957e-01   p_joint 4.252174e-04

Joint ci ratio: 1.763315e-01	ci left: 3.883143e-04	ci right 4.642165e-04	k: 493	n:1160000
Cons ci ratio: 3.051842e-03	ci left: 5.862715e-01	ci right 5.880643e-01	k: 681115	n:1160000
KS ci ratio: 2.858721e-01	ci left: 1.389301e-04	ci right 1.860390e-04	k: 187	n:1160000
CHEK2   1160000 perm   737 sec   (1574 perm/sec)   p_kst 1.612069e-04   p_cons 5.871681e-01   p_joint 4.250000e-04

Joint ci ratio: 1.547882e-01	ci left: 5.054549e-04	ci right 5.910661e-04	k: 640	n:1170000
Cons ci ratio: 3.038813e-03	ci left: 5.862688e-01	ci right 5.880539e-01	k: 686979	n:1170000
KS ci ratio: 2.997479e-01	ci left: 1.242791e-04	ci right 1.688557e-04	k: 170	n:1170000
CHEK2   1170000 perm   748 sec   (1565 perm/sec)   p_kst 1.452991e-04   p_cons 5.871615e-01   p_joint 5.470085e-04

Joint ci ratio: 1.584154e-01	ci left: 4.775575e-04	ci right 5.605193e-04	k: 611	n:1180000
Cons ci ratio: 3.026399e-03	ci left: 5.861941e-01	ci right 5.879716e-01	k: 692758	n:1180000
KS ci ratio: 2.980101e-01	ci left: 1.247938e-04	ci right 1.692463e-04	k: 172	n:1180000
CHEK2   1180000 perm   758 sec   (1557 perm/sec)   p_kst 1.457627e-04   p_cons 5.870831e-01   p_joint 5.177966e-04

Joint ci ratio: 1.584158e-01	ci left: 4.735444e-04	ci right 5.558092e-04	k: 611	n:1190000
Cons ci ratio: 3.013671e-03	ci left: 5.861954e-01	ci right 5.879655e-01	k: 698626	n:1190000
KS ci ratio: 2.963022e-01	ci left: 1.253005e-04	ci right 1.696297e-04	k: 174	n:1190000
CHEK2   1190000 perm   769 sec   (1548 perm/sec)   p_kst 1.462185e-04   p_cons 5.870807e-01   p_joint 5.134454e-04

Joint ci ratio: 1.580291e-01	ci left: 4.719992e-04	ci right 5.537764e-04	k: 614	n:1200000
Cons ci ratio: 3.000793e-03	ci left: 5.862468e-01	ci right 5.880094e-01	k: 704554	n:1200000
KS ci ratio: 2.946234e-01	ci left: 1.257995e-04	ci right 1.700059e-04	k: 176	n:1200000
CHEK2   1200000 perm   779 sec   (1540 perm/sec)   p_kst 1.466667e-04   p_cons 5.871283e-01   p_joint 5.116667e-04

Joint ci ratio: 1.575177e-01	ci left: 4.712736e-04	ci right 5.526359e-04	k: 618	n:1210000
Cons ci ratio: 2.988481e-03	ci left: 5.862320e-01	ci right 5.879874e-01	k: 710403	n:1210000
KS ci ratio: 2.929728e-01	ci left: 1.262909e-04	ci right 1.703753e-04	k: 178	n:1210000
CHEK2   1210000 perm   790 sec   (1531 perm/sec)   p_kst 1.471074e-04   p_cons 5.871099e-01   p_joint 5.107438e-04

Joint ci ratio: 1.568854e-01	ci left: 4.713478e-04	ci right 5.523656e-04	k: 623	n:1220000
Cons ci ratio: 2.976178e-03	ci left: 5.862405e-01	ci right 5.879886e-01	k: 716280	n:1220000
KS ci ratio: 2.905479e-01	ci left: 1.275348e-04	ci right 1.716172e-04	k: 181	n:1220000
CHEK2   1220000 perm   801 sec   (1523 perm/sec)   p_kst 1.483607e-04   p_cons 5.871148e-01   p_joint 5.106557e-04

Joint ci ratio: 1.562606e-01	ci left: 4.714215e-04	ci right 5.520990e-04	k: 628	n:1230000
Cons ci ratio: 2.964071e-03	ci left: 5.862415e-01	ci right 5.879825e-01	k: 722148	n:1230000
KS ci ratio: 2.897531e-01	ci left: 1.272518e-04	ci right 1.710939e-04	k: 182	n:1230000
CHEK2   1230000 perm   812 sec   (1515 perm/sec)   p_kst 1.479675e-04   p_cons 5.871122e-01   p_joint 5.105691e-04

Joint ci ratio: 1.557662e-01	ci left: 4.707196e-04	ci right 5.509982e-04	k: 632	n:1240000
Cons ci ratio: 2.952041e-03	ci left: 5.862538e-01	ci right 5.879878e-01	k: 728030	n:1240000
KS ci ratio: 2.897532e-01	ci left: 1.262256e-04	ci right 1.697142e-04	k: 182	n:1240000
CHEK2   1240000 perm   823 sec   (1507 perm/sec)   p_kst 1.467742e-04   p_cons 5.871210e-01   p_joint 5.096774e-04

Joint ci ratio: 1.555209e-01	ci left: 4.684915e-04	ci right 5.482526e-04	k: 634	n:1250000
Cons ci ratio: 2.939895e-03	ci left: 5.863091e-01	ci right 5.880361e-01	k: 733966	n:1250000
KS ci ratio: 2.897534e-01	ci left: 1.252157e-04	ci right 1.683565e-04	k: 182	n:1250000
CHEK2   1250000 perm   834 sec   (1499 perm/sec)   p_kst 1.456000e-04   p_cons 5.871728e-01   p_joint 5.072000e-04

Joint ci ratio: 1.553988e-01	ci left: 4.655360e-04	ci right 5.447259e-04	k: 635	n:1260000
Cons ci ratio: 2.927768e-03	ci left: 5.863850e-01	ci right 5.881051e-01	k: 739929	n:1260000
KS ci ratio: 2.897536e-01	ci left: 1.242220e-04	ci right 1.670203e-04	k: 182	n:1260000
CHEK2   1260000 perm   845 sec   (1491 perm/sec)   p_kst 1.444444e-04   p_cons 5.872452e-01   p_joint 5.039683e-04

Joint ci ratio: 1.546709e-01	ci left: 4.664115e-04	ci right 5.453443e-04	k: 641	n:1270000
Cons ci ratio: 2.916221e-03	ci left: 5.863880e-01	ci right 5.881013e-01	k: 745801	n:1270000
KS ci ratio: 2.889652e-01	ci left: 1.239741e-04	ci right 1.665496e-04	k: 183	n:1270000
CHEK2   1270000 perm   856 sec   (1484 perm/sec)   p_kst 1.440945e-04   p_cons 5.872449e-01   p_joint 5.047244e-04

Joint ci ratio: 1.541914e-01	ci left: 4.657719e-04	ci right 5.443294e-04	k: 645	n:1280000
Cons ci ratio: 2.905085e-03	ci left: 5.863449e-01	ci right 5.880515e-01	k: 751614	n:1280000
KS ci ratio: 2.866377e-01	ci left: 1.251801e-04	ci right 1.677609e-04	k: 186	n:1280000
CHEK2   1280000 perm   867 sec   (1476 perm/sec)   p_kst 1.453125e-04   p_cons 5.871984e-01   p_joint 5.039063e-04

Joint ci ratio: 1.231758e-01	ci left: 7.361669e-04	ci right 8.335389e-04	k: 1011	n:1290000
Cons ci ratio: 2.893679e-03	ci left: 5.863692e-01	ci right 5.880692e-01	k: 757513	n:1290000
KS ci ratio: 2.858744e-01	ci left: 1.249293e-04	ci right 1.672911e-04	k: 187	n:1290000
CHEK2   1290000 perm   878 sec   (1469 perm/sec)   p_kst 1.449612e-04   p_cons 5.872194e-01   p_joint 7.837209e-04

Joint ci ratio: 1.260770e-01	ci left: 6.962215e-04	ci right 7.906411e-04	k: 965	n:1300000
Cons ci ratio: 2.882332e-03	ci left: 5.864054e-01	ci right 5.880988e-01	k: 763428	n:1300000
KS ci ratio: 2.858746e-01	ci left: 1.239683e-04	ci right 1.660043e-04	k: 187	n:1300000
CHEK2   1300000 perm   890 sec   (1460 perm/sec)   p_kst 1.438462e-04   p_cons 5.872523e-01   p_joint 7.423077e-04

Joint ci ratio: 1.254937e-01	ci left: 6.975609e-04	ci right 7.916919e-04	k: 974	n:1310000
Cons ci ratio: 2.870842e-03	ci left: 5.864877e-01	ci right 5.881745e-01	k: 769404	n:1310000
KS ci ratio: 2.851174e-01	ci left: 1.237307e-04	ci right 1.655549e-04	k: 188	n:1310000
CHEK2   1310000 perm   902 sec   (1452 perm/sec)   p_kst 1.435115e-04   p_cons 5.873313e-01   p_joint 7.435115e-04

Joint ci ratio: 1.250456e-01	ci left: 6.974132e-04	ci right 7.911634e-04	k: 981	n:1320000
Cons ci ratio: 2.860176e-03	ci left: 5.864520e-01	ci right 5.881325e-01	k: 775226	n:1320000
KS ci ratio: 2.836206e-01	ci left: 1.242004e-04	ci right 1.659236e-04	k: 190	n:1320000
CHEK2   1320000 perm   914 sec   (1445 perm/sec)   p_kst 1.439394e-04   p_cons 5.872924e-01   p_joint 7.431818e-04

Joint ci ratio: 1.247919e-01	ci left: 6.950830e-04	ci right 7.883163e-04	k: 985	n:1330000
Cons ci ratio: 2.849438e-03	ci left: 5.864492e-01	ci right 5.881234e-01	k: 781091	n:1330000
KS ci ratio: 2.821472e-01	ci left: 1.246637e-04	ci right 1.662862e-04	k: 192	n:1330000
CHEK2   1330000 perm   926 sec   (1436 perm/sec)   p_kst 1.443609e-04   p_cons 5.872865e-01   p_joint 7.406015e-04

Joint ci ratio: 1.249191e-01	ci left: 6.884497e-04	ci right 7.808944e-04	k: 983	n:1340000
Cons ci ratio: 2.838558e-03	ci left: 5.864912e-01	ci right 5.881591e-01	k: 787016	n:1340000
KS ci ratio: 2.799794e-01	ci left: 1.258144e-04	ci right 1.674415e-04	k: 195	n:1340000
CHEK2   1340000 perm   938 sec   (1428 perm/sec)   p_kst 1.455224e-04   p_cons 5.873254e-01   p_joint 7.335821e-04

Joint ci ratio: 1.242890e-01	ci left: 6.905267e-04	ci right 7.827481e-04	k: 993	n:1350000
Cons ci ratio: 2.828454e-03	ci left: 5.864208e-01	ci right 5.880825e-01	k: 792790	n:1350000
KS ci ratio: 2.778608e-01	ci left: 1.269493e-04	ci right 1.685784e-04	k: 198	n:1350000
CHEK2   1350000 perm   950 sec   (1421 perm/sec)   p_kst 1.466667e-04   p_cons 5.872519e-01   p_joint 7.355556e-04

Joint ci ratio: 1.237918e-01	ci left: 6.911491e-04	ci right 7.830574e-04	k: 1001	n:1360000
Cons ci ratio: 2.818355e-03	ci left: 5.863691e-01	ci right 5.880247e-01	k: 798588	n:1360000
KS ci ratio: 2.778610e-01	ci left: 1.260158e-04	ci right 1.673389e-04	k: 198	n:1360000
CHEK2   1360000 perm   962 sec   (1414 perm/sec)   p_kst 1.455882e-04   p_cons 5.871971e-01   p_joint 7.360294e-04

Joint ci ratio: 1.234842e-01	ci left: 6.896410e-04	ci right 7.811041e-04	k: 1006	n:1370000
Cons ci ratio: 2.807957e-03	ci left: 5.863882e-01	ci right 5.880377e-01	k: 804482	n:1370000
KS ci ratio: 2.778611e-01	ci left: 1.250960e-04	ci right 1.661174e-04	k: 198	n:1370000
CHEK2   1370000 perm   974 sec   (1407 perm/sec)   p_kst 1.445255e-04   p_cons 5.872131e-01   p_joint 7.343066e-04

Joint ci ratio: 1.230573e-01	ci left: 6.895596e-04	ci right 7.806728e-04	k: 1013	n:1380000
Cons ci ratio: 2.797644e-03	ci left: 5.864121e-01	ci right 5.880557e-01	k: 810383	n:1380000
KS ci ratio: 2.771657e-01	ci left: 1.248637e-04	ci right 1.656886e-04	k: 199	n:1380000
CHEK2   1380000 perm   986 sec   (1400 perm/sec)   p_kst 1.442029e-04   p_cons 5.872341e-01   p_joint 7.340580e-04

Joint ci ratio: 1.227551e-01	ci left: 6.880852e-04	ci right 7.787641e-04	k: 1018	n:1390000
Cons ci ratio: 2.787494e-03	ci left: 5.864270e-01	ci right 5.880647e-01	k: 816272	n:1390000
KS ci ratio: 2.764754e-01	ci left: 1.246349e-04	ci right 1.652658e-04	k: 200	n:1390000
CHEK2   1390000 perm   998 sec   (1393 perm/sec)   p_kst 1.438849e-04   p_cons 5.872460e-01   p_joint 7.323741e-04

Joint ci ratio: 1.222760e-01	ci left: 6.887095e-04	ci right 7.790908e-04	k: 1026	n:1400000
Cons ci ratio: 2.777645e-03	ci left: 5.864082e-01	ci right 5.880400e-01	k: 822114	n:1400000
KS ci ratio: 2.751100e-01	ci left: 1.250744e-04	ci right 1.656125e-04	k: 202	n:1400000
CHEK2   1400000 perm   1010 sec   (1386 perm/sec)   p_kst 1.442857e-04   p_cons 5.872243e-01   p_joint 7.328571e-04

Joint ci ratio: 1.219205e-01	ci left: 6.879504e-04	ci right 7.779506e-04	k: 1032	n:1410000
Cons ci ratio: 2.767674e-03	ci left: 5.864294e-01	ci right 5.880554e-01	k: 828012	n:1410000
KS ci ratio: 2.751102e-01	ci left: 1.241874e-04	ci right 1.644379e-04	k: 202	n:1410000
CHEK2   1410000 perm   1023 sec   (1379 perm/sec)   p_kst 1.432624e-04   p_cons 5.872426e-01   p_joint 7.319149e-04

Joint ci ratio: 1.216266e-01	ci left: 6.865195e-04	ci right 7.761004e-04	k: 1037	n:1420000
Cons ci ratio: 2.757861e-03	ci left: 5.864411e-01	ci right 5.880613e-01	k: 833897	n:1420000
KS ci ratio: 2.744351e-01	ci left: 1.239685e-04	ci right 1.640325e-04	k: 203	n:1420000
CHEK2   1420000 perm   1035 sec   (1372 perm/sec)   p_kst 1.429577e-04   p_cons 5.872514e-01   p_joint 7.302817e-04

Joint ci ratio: 1.254976e-01	ci left: 6.390231e-04	ci right 7.252577e-04	k: 974	n:1430000
Cons ci ratio: 2.747977e-03	ci left: 5.864835e-01	ci right 5.880980e-01	k: 839826	n:1430000
KS ci ratio: 2.744352e-01	ci left: 1.231016e-04	ci right 1.628855e-04	k: 203	n:1430000
CHEK2   1430000 perm   1047 sec   (1365 perm/sec)   p_kst 1.419580e-04   p_cons 5.872909e-01   p_joint 6.811189e-04

Joint ci ratio: 1.258861e-01	ci left: 6.305496e-04	ci right 7.159238e-04	k: 968	n:1440000
Cons ci ratio: 2.738469e-03	ci left: 5.864773e-01	ci right 5.880862e-01	k: 845686	n:1440000
KS ci ratio: 2.730997e-01	ci left: 1.235403e-04	ci right 1.632383e-04	k: 205	n:1440000
CHEK2   1440000 perm   1060 sec   (1359 perm/sec)   p_kst 1.423611e-04   p_cons 5.872819e-01   p_joint 6.722222e-04

Joint ci ratio: 1.254339e-01	ci left: 6.308768e-04	ci right 7.159657e-04	k: 975	n:1450000
Cons ci ratio: 2.728877e-03	ci left: 5.865037e-01	ci right 5.881070e-01	k: 851593	n:1450000
KS ci ratio: 2.711324e-01	ci left: 1.246161e-04	ci right 1.643223e-04	k: 208	n:1450000
CHEK2   1450000 perm   1072 sec   (1352 perm/sec)   p_kst 1.434483e-04   p_cons 5.873055e-01   p_joint 6.724138e-04

Joint ci ratio: 1.251139e-01	ci left: 6.298731e-04	ci right 7.145937e-04	k: 980	n:1460000
Cons ci ratio: 2.719720e-03	ci left: 5.864701e-01	ci right 5.880679e-01	k: 857413	n:1460000
KS ci ratio: 2.692071e-01	ci left: 1.256782e-04	ci right 1.653904e-04	k: 211	n:1460000
CHEK2   1460000 perm   1085 sec   (1345 perm/sec)   p_kst 1.445205e-04   p_cons 5.872692e-01   p_joint 6.712329e-04

Joint ci ratio: 1.248597e-01	ci left: 6.282242e-04	ci right 7.125387e-04	k: 984	n:1470000
Cons ci ratio: 2.710741e-03	ci left: 5.864213e-01	ci right 5.880137e-01	k: 863210	n:1470000
KS ci ratio: 2.692072e-01	ci left: 1.248233e-04	ci right 1.642653e-04	k: 211	n:1470000
CHEK2   1470000 perm   1098 sec   (1339 perm/sec)   p_kst 1.435374e-04   p_cons 5.872177e-01   p_joint 6.693878e-04

Joint ci ratio: 1.251144e-01	ci left: 6.213611e-04	ci right 7.049373e-04	k: 980	n:1480000
Cons ci ratio: 2.701583e-03	ci left: 5.864212e-01	ci right 5.880082e-01	k: 869078	n:1480000
KS ci ratio: 2.667027e-01	ci left: 1.265010e-04	ci right 1.660392e-04	k: 215	n:1480000
CHEK2   1480000 perm   1110 sec   (1333 perm/sec)   p_kst 1.452703e-04   p_cons 5.872149e-01   p_joint 6.621622e-04

Joint ci ratio: 1.248603e-01	ci left: 6.197915e-04	ci right 7.029746e-04	k: 984	n:1490000
Cons ci ratio: 2.692499e-03	ci left: 5.864244e-01	ci right 5.880061e-01	k: 874951	n:1490000
KS ci ratio: 2.654764e-01	ci left: 1.269048e-04	ci right 1.663565e-04	k: 217	n:1490000
CHEK2   1490000 perm   1123 sec   (1327 perm/sec)   p_kst 1.456376e-04   p_cons 5.872154e-01   p_joint 6.604027e-04

Joint ci ratio: 1.257580e-01	ci left: 6.066185e-04	ci right 6.886627e-04	k: 970	n:1500000
Cons ci ratio: 2.683525e-03	ci left: 5.864243e-01	ci right 5.880007e-01	k: 880819	n:1500000
KS ci ratio: 2.648696e-01	ci left: 1.266811e-04	ci right 1.659583e-04	k: 218	n:1500000
CHEK2   1500000 perm   1136 sec   (1320 perm/sec)   p_kst 1.453333e-04   p_cons 5.872127e-01   p_joint 6.466667e-04

Joint ci ratio: 1.255643e-01	ci left: 6.045255e-04	ci right 6.861512e-04	k: 973	n:1510000
Cons ci ratio: 2.674310e-03	ci left: 5.864838e-01	ci right 5.880550e-01	k: 886777	n:1510000
KS ci ratio: 2.648698e-01	ci left: 1.258422e-04	ci right 1.648593e-04	k: 218	n:1510000
CHEK2   1510000 perm   1149 sec   (1314 perm/sec)   p_kst 1.443709e-04   p_cons 5.872695e-01   p_joint 6.443709e-04

Joint ci ratio: 1.253074e-01	ci left: 6.030973e-04	ci right 6.843512e-04	k: 977	n:1520000
Cons ci ratio: 2.665606e-03	ci left: 5.864668e-01	ci right 5.880328e-01	k: 892620	n:1520000
KS ci ratio: 2.642671e-01	ci left: 1.256285e-04	ci right 1.644761e-04	k: 219	n:1520000
CHEK2   1520000 perm   1162 sec   (1308 perm/sec)   p_kst 1.440789e-04   p_cons 5.872500e-01   p_joint 6.427632e-04

Joint ci ratio: 1.251158e-01	ci left: 6.010548e-04	ci right 6.819006e-04	k: 980	n:1530000
Cons ci ratio: 2.656818e-03	ci left: 5.864808e-01	ci right 5.880417e-01	k: 898510	n:1530000
KS ci ratio: 2.642673e-01	ci left: 1.248074e-04	ci right 1.634011e-04	k: 219	n:1530000
CHEK2   1530000 perm   1175 sec   (1302 perm/sec)   p_kst 1.431373e-04   p_cons 5.872614e-01   p_joint 6.405229e-04

Joint ci ratio: 1.244828e-01	ci left: 6.034427e-04	ci right 6.841687e-04	k: 990	n:1540000
Cons ci ratio: 2.648159e-03	ci left: 5.864869e-01	ci right 5.880427e-01	k: 904388	n:1540000
KS ci ratio: 2.630741e-01	ci left: 1.252098e-04	ci right 1.637244e-04	k: 221	n:1540000
CHEK2   1540000 perm   1188 sec   (1296 perm/sec)   p_kst 1.435065e-04   p_cons 5.872649e-01   p_joint 6.428571e-04

Joint ci ratio: 1.241077e-01	ci left: 6.033001e-04	ci right 6.837460e-04	k: 996	n:1550000
Cons ci ratio: 2.639517e-03	ci left: 5.865051e-01	ci right 5.880559e-01	k: 910285	n:1550000
KS ci ratio: 2.618970e-01	ci left: 1.256075e-04	ci right 1.640431e-04	k: 223	n:1550000
CHEK2   1550000 perm   1201 sec   (1291 perm/sec)   p_kst 1.438710e-04   p_cons 5.872806e-01   p_joint 6.425806e-04

Joint ci ratio: 1.237359e-01	ci left: 6.031597e-04	ci right 6.833283e-04	k: 1002	n:1560000
Cons ci ratio: 2.631053e-03	ci left: 5.865058e-01	ci right 5.880516e-01	k: 916155	n:1560000
KS ci ratio: 2.607355e-01	ci left: 1.260004e-04	ci right 1.643574e-04	k: 225	n:1560000
CHEK2   1560000 perm   1214 sec   (1285 perm/sec)   p_kst 1.442308e-04   p_cons 5.872788e-01   p_joint 6.423077e-04

Joint ci ratio: 1.232453e-01	ci left: 6.042561e-04	ci right 6.842288e-04	k: 1010	n:1570000
Cons ci ratio: 2.622567e-03	ci left: 5.865256e-01	ci right 5.880664e-01	k: 922055	n:1570000
KS ci ratio: 2.607357e-01	ci left: 1.251978e-04	ci right 1.633106e-04	k: 225	n:1570000
CHEK2   1570000 perm   1227 sec   (1279 perm/sec)   p_kst 1.433121e-04   p_cons 5.872962e-01   p_joint 6.433121e-04

Joint ci ratio: 1.491992e-01	ci left: 4.041246e-04	ci right 4.698810e-04	k: 689	n:1580000
Cons ci ratio: 2.614510e-03	ci left: 5.864806e-01	ci right 5.880166e-01	k: 927853	n:1580000
KS ci ratio: 2.607358e-01	ci left: 1.244054e-04	ci right 1.622770e-04	k: 225	n:1580000
CHEK2   1580000 perm   1241 sec   (1274 perm/sec)   p_kst 1.424051e-04   p_cons 5.872487e-01   p_joint 4.360759e-04

Joint ci ratio: 1.483416e-01	ci left: 4.064271e-04	ci right 4.721443e-04	k: 697	n:1590000
Cons ci ratio: 2.606244e-03	ci left: 5.864890e-01	ci right 5.880201e-01	k: 933735	n:1590000
KS ci ratio: 2.595896e-01	ci left: 1.247988e-04	ci right 1.625960e-04	k: 227	n:1590000
CHEK2   1590000 perm   1254 sec   (1268 perm/sec)   p_kst 1.427673e-04   p_cons 5.872547e-01   p_joint 4.383648e-04

Joint ci ratio: 1.476032e-01	ci left: 4.081000e-04	ci right 4.737303e-04	k: 704	n:1600000
Cons ci ratio: 2.598282e-03	ci left: 5.864548e-01	ci right 5.879811e-01	k: 939549	n:1600000
KS ci ratio: 2.584585e-01	ci left: 1.251877e-04	ci right 1.629108e-04	k: 229	n:1600000
CHEK2   1600000 perm   1267 sec   (1263 perm/sec)   p_kst 1.431250e-04   p_cons 5.872181e-01   p_joint 4.400000e-04

Joint ci ratio: 1.468757e-01	ci left: 4.097529e-04	ci right 4.752957e-04	k: 711	n:1610000
Cons ci ratio: 2.590321e-03	ci left: 5.864347e-01	ci right 5.879563e-01	k: 945385	n:1610000
KS ci ratio: 2.562397e-01	ci left: 1.267344e-04	ci right 1.645433e-04	k: 233	n:1610000
CHEK2   1610000 perm   1281 sec   (1257 perm/sec)   p_kst 1.447205e-04   p_cons 5.871957e-01   p_joint 4.416149e-04

Joint ci ratio: 1.465673e-01	ci left: 4.090074e-04	ci right 4.742816e-04	k: 714	n:1620000
Cons ci ratio: 2.582369e-03	ci left: 5.864266e-01	ci right 5.879435e-01	k: 951240	n:1620000
KS ci ratio: 2.562398e-01	ci left: 1.259521e-04	ci right 1.635276e-04	k: 233	n:1620000
CHEK2   1620000 perm   1294 sec   (1252 perm/sec)   p_kst 1.438272e-04   p_cons 5.871852e-01   p_joint 4.407407e-04

Joint ci ratio: 1.464651e-01	ci left: 4.070892e-04	ci right 4.720079e-04	k: 715	n:1630000
Cons ci ratio: 2.574660e-03	ci left: 5.863867e-01	ci right 5.878989e-01	k: 957043	n:1630000
KS ci ratio: 2.562399e-01	ci left: 1.251793e-04	ci right 1.625244e-04	k: 233	n:1630000
CHEK2   1630000 perm   1308 sec   (1246 perm/sec)   p_kst 1.429448e-04   p_cons 5.871429e-01   p_joint 4.386503e-04

Joint ci ratio: 1.459563e-01	ci left: 4.075442e-04	ci right 4.722900e-04	k: 720	n:1640000
Cons ci ratio: 2.566496e-03	ci left: 5.864460e-01	ci right 5.879537e-01	k: 963008	n:1640000
KS ci ratio: 2.551518e-01	ci left: 1.255574e-04	ci right 1.628309e-04	k: 235	n:1640000
CHEK2   1640000 perm   1322 sec   (1241 perm/sec)   p_kst 1.432927e-04   p_cons 5.872000e-01   p_joint 4.390244e-04

Joint ci ratio: 1.457544e-01	ci left: 4.062421e-04	ci right 4.706840e-04	k: 722	n:1650000
Cons ci ratio: 2.558730e-03	ci left: 5.864441e-01	ci right 5.879471e-01	k: 968873	n:1650000
KS ci ratio: 2.546130e-01	ci left: 1.253638e-04	ci right 1.624887e-04	k: 236	n:1650000
CHEK2   1650000 perm   1335 sec   (1236 perm/sec)   p_kst 1.430303e-04   p_cons 5.871958e-01   p_joint 4.375758e-04

Joint ci ratio: 1.453529e-01	ci left: 4.061167e-04	ci right 4.703459e-04	k: 726	n:1660000
Cons ci ratio: 2.550444e-03	ci left: 5.865542e-01	ci right 5.880527e-01	k: 974924	n:1660000
KS ci ratio: 2.535454e-01	ci left: 1.257367e-04	ci right 1.627912e-04	k: 238	n:1660000
CHEK2   1660000 perm   1349 sec   (1231 perm/sec)   p_kst 1.433735e-04   p_cons 5.873036e-01   p_joint 4.373494e-04

Joint ci ratio: 1.445595e-01	ci left: 4.083016e-04	ci right 4.724934e-04	k: 734	n:1670000
Cons ci ratio: 2.542856e-03	ci left: 5.865451e-01	ci right 5.880390e-01	k: 980778	n:1670000
KS ci ratio: 2.524911e-01	ci left: 1.261055e-04	ci right 1.630898e-04	k: 240	n:1670000
CHEK2   1670000 perm   1363 sec   (1225 perm/sec)   p_kst 1.437126e-04   p_cons 5.872922e-01   p_joint 4.395210e-04

Joint ci ratio: 1.440703e-01	ci left: 4.087400e-04	ci right 4.727646e-04	k: 739	n:1680000
Cons ci ratio: 2.535435e-03	ci left: 5.865170e-01	ci right 5.880065e-01	k: 986600	n:1680000
KS ci ratio: 2.514499e-01	ci left: 1.264701e-04	ci right 1.633845e-04	k: 242	n:1680000
CHEK2   1680000 perm   1377 sec   (1220 perm/sec)   p_kst 1.440476e-04   p_cons 5.872619e-01   p_joint 4.398810e-04

Joint ci ratio: 1.435860e-01	ci left: 4.091735e-04	ci right 4.730321e-04	k: 744	n:1690000
Cons ci ratio: 2.528100e-03	ci left: 5.864851e-01	ci right 5.879702e-01	k: 992415	n:1690000
KS ci ratio: 2.499118e-01	ci left: 1.273854e-04	ci right 1.643042e-04	k: 245	n:1690000
CHEK2   1690000 perm   1391 sec   (1215 perm/sec)   p_kst 1.449704e-04   p_cons 5.872278e-01   p_joint 4.402367e-04

Joint ci ratio: 1.431065e-01	ci left: 4.096023e-04	ci right 4.732961e-04	k: 749	n:1700000
Cons ci ratio: 2.520695e-03	ci left: 5.864795e-01	ci right 5.879602e-01	k: 998274	n:1700000
KS ci ratio: 2.499119e-01	ci left: 1.266361e-04	ci right 1.633377e-04	k: 245	n:1700000
CHEK2   1700000 perm   1405 sec   (1210 perm/sec)   p_kst 1.441176e-04   p_cons 5.872200e-01   p_joint 4.405882e-04

Joint ci ratio: 1.423492e-01	ci left: 4.117183e-04	ci right 4.753736e-04	k: 757	n:1710000
Cons ci ratio: 2.513496e-03	ci left: 5.864464e-01	ci right 5.879229e-01	k: 1004086	n:1710000
KS ci ratio: 2.489021e-01	ci left: 1.269920e-04	ci right 1.636250e-04	k: 247	n:1710000
CHEK2   1710000 perm   1419 sec   (1205 perm/sec)   p_kst 1.444444e-04   p_cons 5.871848e-01   p_joint 4.426901e-04

Joint ci ratio: 1.481319e-01	ci left: 3.768280e-04	ci right 4.376654e-04	k: 699	n:1720000
Cons ci ratio: 2.506443e-03	ci left: 5.863975e-01	ci right 5.878697e-01	k: 1009870	n:1720000
KS ci ratio: 2.489022e-01	ci left: 1.262537e-04	ci right 1.626737e-04	k: 247	n:1720000
CHEK2   1720000 perm   1433 sec   (1200 perm/sec)   p_kst 1.436047e-04   p_cons 5.871337e-01   p_joint 4.063953e-04

Joint ci ratio: 1.477105e-01	ci left: 3.768764e-04	ci right 4.375332e-04	k: 703	n:1730000
Cons ci ratio: 2.499007e-03	ci left: 5.864347e-01	ci right 5.879026e-01	k: 1015802	n:1730000
KS ci ratio: 2.489023e-01	ci left: 1.255239e-04	ci right 1.617334e-04	k: 247	n:1730000
CHEK2   1730000 perm   1447 sec   (1195 perm/sec)   p_kst 1.427746e-04   p_cons 5.871688e-01   p_joint 4.063584e-04

Joint ci ratio: 1.472926e-01	ci left: 3.769245e-04	ci right 4.374023e-04	k: 707	n:1740000
Cons ci ratio: 2.491794e-03	ci left: 5.864410e-01	ci right 5.879047e-01	k: 1021681	n:1740000
KS ci ratio: 2.484021e-01	ci left: 1.253414e-04	ci right 1.614144e-04	k: 248	n:1740000
CHEK2   1740000 perm   1462 sec   (1190 perm/sec)   p_kst 1.425287e-04   p_cons 5.871730e-01   p_joint 4.063218e-04

Joint ci ratio: 1.466723e-01	ci left: 3.780731e-04	ci right 4.384574e-04	k: 713	n:1750000
Cons ci ratio: 2.484848e-03	ci left: 5.864073e-01	ci right 5.878667e-01	k: 1027490	n:1750000
KS ci ratio: 2.469189e-01	ci left: 1.262331e-04	ci right 1.623125e-04	k: 251	n:1750000
CHEK2   1750000 perm   1476 sec   (1186 perm/sec)   p_kst 1.434286e-04   p_cons 5.871371e-01   p_joint 4.074286e-04

Joint ci ratio: 1.513010e-01	ci left: 3.524033e-04	ci right 4.106249e-04	k: 670	n:1760000
Cons ci ratio: 2.478027e-03	ci left: 5.863608e-01	ci right 5.878162e-01	k: 1033276	n:1760000
KS ci ratio: 2.469190e-01	ci left: 1.255158e-04	ci right 1.613903e-04	k: 251	n:1760000
CHEK2   1760000 perm   1490 sec   (1181 perm/sec)   p_kst 1.426136e-04   p_cons 5.870886e-01   p_joint 3.806818e-04

Joint ci ratio: 1.509640e-01	ci left: 3.520432e-04	ci right 4.100640e-04	k: 673	n:1770000
Cons ci ratio: 2.470847e-03	ci left: 5.863963e-01	ci right 5.878475e-01	k: 1039206	n:1770000
KS ci ratio: 2.459450e-01	ci left: 1.258669e-04	ci right 1.616780e-04	k: 253	n:1770000
CHEK2   1770000 perm   1505 sec   (1176 perm/sec)   p_kst 1.429379e-04   p_cons 5.871220e-01   p_joint 3.802260e-04

Joint ci ratio: 1.506291e-01	ci left: 3.516872e-04	ci right 4.095092e-04	k: 676	n:1780000
Cons ci ratio: 2.463837e-03	ci left: 5.864100e-01	ci right 5.878571e-01	k: 1045098	n:1780000
KS ci ratio: 2.449823e-01	ci left: 1.262143e-04	ci right 1.619623e-04	k: 255	n:1780000
CHEK2   1780000 perm   1520 sec   (1171 perm/sec)   p_kst 1.432584e-04   p_cons 5.871337e-01   p_joint 3.797753e-04

Joint ci ratio: 1.504072e-01	ci left: 3.507977e-04	ci right 4.083808e-04	k: 678	n:1790000
Cons ci ratio: 2.456674e-03	ci left: 5.864655e-01	ci right 5.879085e-01	k: 1051065	n:1790000
KS ci ratio: 2.449824e-01	ci left: 1.255091e-04	ci right 1.610575e-04	k: 255	n:1790000
CHEK2   1790000 perm   1535 sec   (1166 perm/sec)   p_kst 1.424581e-04   p_cons 5.871872e-01   p_joint 3.787709e-04

Joint ci ratio: 1.497470e-01	ci left: 3.520570e-04	ci right 4.095704e-04	k: 684	n:1800000
Cons ci ratio: 2.449818e-03	ci left: 5.864720e-01	ci right 5.879110e-01	k: 1056945	n:1800000
KS ci ratio: 2.435594e-01	ci left: 1.263765e-04	ci right 1.619312e-04	k: 258	n:1800000
CHEK2   1800000 perm   1549 sec   (1162 perm/sec)   p_kst 1.433333e-04   p_cons 5.871917e-01   p_joint 3.800000e-04

Joint ci ratio: 1.495289e-01	ci left: 3.511755e-04	ci right 4.084539e-04	k: 686	n:1810000
Cons ci ratio: 2.442921e-03	ci left: 5.864978e-01	ci right 5.879329e-01	k: 1062860	n:1810000
KS ci ratio: 2.430906e-01	ci left: 1.261971e-04	ci right 1.616226e-04	k: 259	n:1810000
CHEK2   1810000 perm   1564 sec   (1157 perm/sec)   p_kst 1.430939e-04   p_cons 5.872155e-01   p_joint 3.790055e-04

Joint ci ratio: 1.493118e-01	ci left: 3.503038e-04	ci right 4.073496e-04	k: 688	n:1820000
Cons ci ratio: 2.436132e-03	ci left: 5.865134e-01	ci right 5.879445e-01	k: 1068757	n:1820000
KS ci ratio: 2.426244e-01	ci left: 1.260198e-04	ci right 1.613174e-04	k: 260	n:1820000
CHEK2   1820000 perm   1579 sec   (1152 perm/sec)   p_kst 1.428571e-04   p_cons 5.872291e-01   p_joint 3.780220e-04

Joint ci ratio: 1.487729e-01	ci left: 3.510199e-04	ci right 4.079577e-04	k: 693	n:1830000
Cons ci ratio: 2.429610e-03	ci left: 5.864868e-01	ci right 5.879140e-01	k: 1074577	n:1830000
KS ci ratio: 2.421610e-01	ci left: 1.258444e-04	ci right 1.610155e-04	k: 261	n:1830000
CHEK2   1830000 perm   1595 sec   (1148 perm/sec)   p_kst 1.426230e-04   p_cons 5.872005e-01   p_joint 3.786885e-04

Joint ci ratio: 1.481338e-01	ci left: 3.522520e-04	ci right 4.091225e-04	k: 699	n:1840000
Cons ci ratio: 2.423287e-03	ci left: 5.864311e-01	ci right 5.878545e-01	k: 1080343	n:1840000
KS ci ratio: 2.407863e-01	ci left: 1.266922e-04	ci right 1.618693e-04	k: 264	n:1840000
CHEK2   1840000 perm   1610 sec   (1143 perm/sec)   p_kst 1.434783e-04   p_cons 5.871429e-01   p_joint 3.798913e-04

Joint ci ratio: 1.477124e-01	ci left: 3.524300e-04	ci right 4.091531e-04	k: 703	n:1850000
Cons ci ratio: 2.416603e-03	ci left: 5.864582e-01	ci right 5.878777e-01	k: 1086261	n:1850000
KS ci ratio: 2.407864e-01	ci left: 1.260074e-04	ci right 1.609943e-04	k: 264	n:1850000
CHEK2   1850000 perm   1625 sec   (1138 perm/sec)   p_kst 1.427027e-04   p_cons 5.871681e-01   p_joint 3.800000e-04

Joint ci ratio: 1.470869e-01	ci left: 3.536421e-04	ci right 4.102980e-04	k: 709	n:1860000
Cons ci ratio: 2.410044e-03	ci left: 5.864711e-01	ci right 5.878867e-01	k: 1092153	n:1860000
KS ci ratio: 2.403334e-01	ci left: 1.258352e-04	ci right 1.606988e-04	k: 265	n:1860000
CHEK2   1860000 perm   1641 sec   (1134 perm/sec)   p_kst 1.424731e-04   p_cons 5.871790e-01   p_joint 3.811828e-04

Joint ci ratio: 1.469835e-01	ci left: 3.522660e-04	ci right 4.086584e-04	k: 710	n:1870000
Cons ci ratio: 2.403567e-03	ci left: 5.864779e-01	ci right 5.878897e-01	k: 1098034	n:1870000
KS ci ratio: 2.403335e-01	ci left: 1.251623e-04	ci right 1.598394e-04	k: 265	n:1870000
CHEK2   1870000 perm   1656 sec   (1129 perm/sec)   p_kst 1.417112e-04   p_cons 5.871840e-01   p_joint 3.796791e-04

Joint ci ratio: 1.468804e-01	ci left: 3.509046e-04	ci right 4.070361e-04	k: 711	n:1880000
Cons ci ratio: 2.397289e-03	ci left: 5.864549e-01	ci right 5.878630e-01	k: 1103859	n:1880000
KS ci ratio: 2.398830e-01	ci left: 1.249964e-04	ci right 1.595531e-04	k: 266	n:1880000
CHEK2   1880000 perm   1672 sec   (1124 perm/sec)   p_kst 1.414894e-04   p_cons 5.871590e-01   p_joint 3.781915e-04

Joint ci ratio: 1.464695e-01	ci left: 3.510867e-04	ci right 4.070765e-04	k: 715	n:1890000
Cons ci ratio: 2.390990e-03	ci left: 5.864464e-01	ci right 5.878507e-01	k: 1109711	n:1890000
KS ci ratio: 2.389895e-01	ci left: 1.253298e-04	ci right 1.598304e-04	k: 268	n:1890000
CHEK2   1890000 perm   1689 sec   (1119 perm/sec)   p_kst 1.417989e-04   p_cons 5.871487e-01   p_joint 3.783069e-04

Joint ci ratio: 1.454570e-01	ci left: 3.543099e-04	ci right 4.103892e-04	k: 725	n:1900000
Cons ci ratio: 2.384639e-03	ci left: 5.864585e-01	ci right 5.878591e-01	k: 1115602	n:1900000
KS ci ratio: 2.376678e-01	ci left: 1.261548e-04	ci right 1.606623e-04	k: 271	n:1900000
CHEK2   1900000 perm   1704 sec   (1115 perm/sec)   p_kst 1.426316e-04   p_cons 5.871589e-01   p_joint 3.815789e-04

Joint ci ratio: 1.452571e-01	ci left: 3.534639e-04	ci right 4.093258e-04	k: 727	n:1910000
Cons ci ratio: 2.378184e-03	ci left: 5.865019e-01	ci right 5.878989e-01	k: 1121553	n:1910000
KS ci ratio: 2.372322e-01	ci left: 1.259867e-04	ci right 1.603757e-04	k: 272	n:1910000
CHEK2   1910000 perm   1720 sec   (1111 perm/sec)   p_kst 1.424084e-04   p_cons 5.872005e-01   p_joint 3.806283e-04

Joint ci ratio: 1.450581e-01	ci left: 3.526268e-04	ci right 4.082733e-04	k: 729	n:1920000
Cons ci ratio: 2.372016e-03	ci left: 5.864970e-01	ci right 5.878903e-01	k: 1127412	n:1920000
KS ci ratio: 2.372323e-01	ci left: 1.253306e-04	ci right 1.595405e-04	k: 272	n:1920000
CHEK2   1920000 perm   1736 sec   (1106 perm/sec)   p_kst 1.416667e-04   p_cons 5.871937e-01   p_joint 3.796875e-04

Joint ci ratio: 1.444655e-01	ci left: 3.537959e-04	ci right 4.093792e-04	k: 735	n:1930000
Cons ci ratio: 2.365736e-03	ci left: 5.865247e-01	ci right 5.879144e-01	k: 1133334	n:1930000
KS ci ratio: 2.363680e-01	ci left: 1.256560e-04	ci right 1.598115e-04	k: 274	n:1930000
CHEK2   1930000 perm   1752 sec   (1102 perm/sec)   p_kst 1.419689e-04   p_cons 5.872197e-01   p_joint 3.808290e-04

Joint ci ratio: 1.441720e-01	ci left: 3.534628e-04	ci right 4.088712e-04	k: 738	n:1940000
Cons ci ratio: 2.359534e-03	ci left: 5.865465e-01	ci right 5.879326e-01	k: 1139245	n:1940000
KS ci ratio: 2.355131e-01	ci left: 1.259783e-04	ci right 1.600794e-04	k: 276	n:1940000
CHEK2   1940000 perm   1768 sec   (1097 perm/sec)   p_kst 1.422680e-04   p_cons 5.872397e-01   p_joint 3.804124e-04

Joint ci ratio: 1.205399e-01	ci left: 5.093727e-04	ci right 5.752022e-04	k: 1056	n:1950000
Cons ci ratio: 2.353422e-03	ci left: 5.865594e-01	ci right 5.879419e-01	k: 1145139	n:1950000
KS ci ratio: 2.342479e-01	ci left: 1.267802e-04	ci right 1.608873e-04	k: 279	n:1950000
CHEK2   1950000 perm   1784 sec   (1093 perm/sec)   p_kst 1.430769e-04   p_cons 5.872508e-01   p_joint 5.415385e-04

Joint ci ratio: 1.204830e-01	ci left: 5.072687e-04	ci right 5.727931e-04	k: 1057	n:1960000
Cons ci ratio: 2.347205e-03	ci left: 5.866037e-01	ci right 5.879827e-01	k: 1151095	n:1960000
KS ci ratio: 2.342480e-01	ci left: 1.261333e-04	ci right 1.600665e-04	k: 279	n:1960000
CHEK2   1960000 perm   1800 sec   (1089 perm/sec)   p_kst 1.423469e-04   p_cons 5.872934e-01   p_joint 5.392857e-04

Joint ci ratio: 1.203126e-01	ci left: 5.061707e-04	ci right 5.714543e-04	k: 1060	n:1970000
Cons ci ratio: 2.341367e-03	ci left: 5.865791e-01	ci right 5.879546e-01	k: 1156916	n:1970000
KS ci ratio: 2.338309e-01	ci left: 1.259709e-04	ci right 1.597913e-04	k: 280	n:1970000
CHEK2   1970000 perm   1816 sec   (1085 perm/sec)   p_kst 1.421320e-04   p_cons 5.872670e-01   p_joint 5.380711e-04

Joint ci ratio: 1.201430e-01	ci left: 5.050838e-04	ci right 5.701289e-04	k: 1063	n:1980000
Cons ci ratio: 2.335578e-03	ci left: 5.865538e-01	ci right 5.879258e-01	k: 1162735	n:1980000
KS ci ratio: 2.334159e-01	ci left: 1.258102e-04	ci right 1.595188e-04	k: 281	n:1980000
CHEK2   1980000 perm   1833 sec   (1080 perm/sec)   p_kst 1.419192e-04   p_cons 5.872399e-01   p_joint 5.368687e-04

Joint ci ratio: 1.198617e-01	ci left: 5.049829e-04	ci right 5.698518e-04	k: 1068	n:1990000
Cons ci ratio: 2.329705e-03	ci left: 5.865548e-01	ci right 5.879234e-01	k: 1168606	n:1990000
KS ci ratio: 2.325925e-01	ci left: 1.261243e-04	ci right 1.597808e-04	k: 283	n:1990000
CHEK2   1990000 perm   1849 sec   (1076 perm/sec)   p_kst 1.422111e-04   p_cons 5.872392e-01   p_joint 5.366834e-04

Joint ci ratio: 1.195267e-01	ci left: 5.053681e-04	ci right 5.700923e-04	k: 1074	n:2000000
Cons ci ratio: 2.323930e-03	ci left: 5.865448e-01	ci right 5.879099e-01	k: 1174455	n:2000000
KS ci ratio: 2.321842e-01	ci left: 1.259646e-04	ci right 1.595110e-04	k: 284	n:2000000
CHEK2   2000000 perm   1865 sec   (1072 perm/sec)   p_kst 1.420000e-04   p_cons 5.872275e-01   p_joint 5.370000e-04

Joint ci ratio: 1.194713e-01	ci left: 5.033365e-04	ci right 5.677685e-04	k: 1075	n:2010000
Cons ci ratio: 2.318169e-03	ci left: 5.865409e-01	ci right 5.879026e-01	k: 1180316	n:2010000
KS ci ratio: 2.321842e-01	ci left: 1.253379e-04	ci right 1.587174e-04	k: 284	n:2010000
CHEK2   2010000 perm   1882 sec   (1068 perm/sec)   p_kst 1.412935e-04   p_cons 5.872219e-01   p_joint 5.348259e-04

Joint ci ratio: 1.191947e-01	ci left: 5.032461e-04	ci right 5.675068e-04	k: 1080	n:2020000
Cons ci ratio: 2.312504e-03	ci left: 5.865256e-01	ci right 5.878840e-01	k: 1186154	n:2020000
KS ci ratio: 2.317780e-01	ci left: 1.251837e-04	ci right 1.584554e-04	k: 285	n:2020000
CHEK2   2020000 perm   1899 sec   (1064 perm/sec)   p_kst 1.410891e-04   p_cons 5.872050e-01   p_joint 5.346535e-04

Joint ci ratio: 1.189748e-01	ci left: 5.026788e-04	ci right 5.667404e-04	k: 1084	n:2030000
Cons ci ratio: 2.306708e-03	ci left: 5.865470e-01	ci right 5.879020e-01	k: 1192066	n:2030000
KS ci ratio: 2.317781e-01	ci left: 1.245670e-04	ci right 1.576749e-04	k: 285	n:2030000
CHEK2   2030000 perm   1916 sec   (1060 perm/sec)   p_kst 1.403941e-04   p_cons 5.872246e-01   p_joint 5.339901e-04

Joint ci ratio: 1.187561e-01	ci left: 5.021171e-04	ci right 5.659813e-04	k: 1088	n:2040000
Cons ci ratio: 2.301038e-03	ci left: 5.865505e-01	ci right 5.879022e-01	k: 1197942	n:2040000
KS ci ratio: 2.313739e-01	ci left: 1.244181e-04	ci right 1.574205e-04	k: 286	n:2040000
CHEK2   2040000 perm   1933 sec   (1055 perm/sec)   p_kst 1.401961e-04   p_cons 5.872265e-01   p_joint 5.333333e-04

Joint ci ratio: 1.184303e-01	ci left: 5.025078e-04	ci right 5.662340e-04	k: 1094	n:2050000
Cons ci ratio: 2.295491e-03	ci left: 5.865369e-01	ci right 5.878853e-01	k: 1203783	n:2050000
KS ci ratio: 2.301740e-01	ci left: 1.251900e-04	ci right 1.582005e-04	k: 289	n:2050000
CHEK2   2050000 perm   1950 sec   (1051 perm/sec)   p_kst 1.409756e-04   p_cons 5.872112e-01   p_joint 5.336585e-04

Joint ci ratio: 1.182146e-01	ci left: 5.019527e-04	ci right 5.654845e-04	k: 1098	n:2060000
Cons ci ratio: 2.289948e-03	ci left: 5.865312e-01	ci right 5.878763e-01	k: 1209640	n:2060000
KS ci ratio: 2.293843e-01	ci left: 1.254973e-04	ci right 1.584592e-04	k: 291	n:2060000
CHEK2   2060000 perm   1967 sec   (1047 perm/sec)   p_kst 1.412621e-04   p_cons 5.872039e-01   p_joint 5.330097e-04

Joint ci ratio: 1.210585e-01	ci left: 4.756269e-04	ci right 5.373786e-04	k: 1047	n:2070000
Cons ci ratio: 2.284458e-03	ci left: 5.865227e-01	ci right 5.878645e-01	k: 1215491	n:2070000
KS ci ratio: 2.282149e-01	ci left: 1.262573e-04	ci right 1.592259e-04	k: 294	n:2070000
CHEK2   2070000 perm   1985 sec   (1043 perm/sec)   p_kst 1.420290e-04   p_cons 5.871937e-01   p_joint 5.057971e-04

Joint ci ratio: 1.214652e-01	ci left: 4.700769e-04	ci right 5.313278e-04	k: 1040	n:2080000
Cons ci ratio: 2.279095e-03	ci left: 5.864955e-01	ci right 5.878341e-01	k: 1221303	n:2080000
KS ci ratio: 2.270632e-01	ci left: 1.270103e-04	ci right 1.599848e-04	k: 297	n:2080000
CHEK2   2080000 perm   2002 sec   (1039 perm/sec)   p_kst 1.427885e-04   p_cons 5.871649e-01   p_joint 5.000000e-04

Joint ci ratio: 1.226498e-01	ci left: 4.585503e-04	ci right 5.189243e-04	k: 1020	n:2090000
Cons ci ratio: 2.273546e-03	ci left: 5.865164e-01	ci right 5.878518e-01	k: 1227215	n:2090000
KS ci ratio: 2.270633e-01	ci left: 1.264026e-04	ci right 1.592193e-04	k: 297	n:2090000
CHEK2   2090000 perm   2020 sec   (1035 perm/sec)   p_kst 1.421053e-04   p_cons 5.871842e-01   p_joint 4.880383e-04

Joint ci ratio: 1.221720e-01	ci left: 4.600596e-04	ci right 5.203794e-04	k: 1028	n:2100000
Cons ci ratio: 2.268246e-03	ci left: 5.864923e-01	ci right 5.878246e-01	k: 1233033	n:2100000
KS ci ratio: 2.266833e-01	ci left: 1.262498e-04	ci right 1.589643e-04	k: 298	n:2100000
CHEK2   2100000 perm   2038 sec   (1030 perm/sec)   p_kst 1.419048e-04   p_cons 5.871586e-01   p_joint 4.895238e-04

Joint ci ratio: 1.224702e-01	ci left: 4.555820e-04	ci right 5.154710e-04	k: 1023	n:2110000
Cons ci ratio: 2.262786e-03	ci left: 5.865107e-01	ci right 5.878398e-01	k: 1238940	n:2110000
KS ci ratio: 2.255545e-01	ci left: 1.269928e-04	ci right 1.597131e-04	k: 301	n:2110000
CHEK2   2110000 perm   2056 sec   (1026 perm/sec)   p_kst 1.426540e-04   p_cons 5.871754e-01   p_joint 4.848341e-04

Joint ci ratio: 1.246196e-01	ci left: 4.374335e-04	ci right 4.960205e-04	k: 988	n:2120000
Cons ci ratio: 2.257267e-03	ci left: 5.865501e-01	ci right 5.878761e-01	k: 1244892	n:2120000
KS ci ratio: 2.251820e-01	ci left: 1.268388e-04	ci right 1.594581e-04	k: 302	n:2120000
CHEK2   2120000 perm   2074 sec   (1022 perm/sec)   p_kst 1.424528e-04   p_cons 5.872132e-01   p_joint 4.660377e-04

Joint ci ratio: 1.243058e-01	ci left: 4.376542e-04	ci right 4.961123e-04	k: 993	n:2130000
Cons ci ratio: 2.251988e-03	ci left: 5.865460e-01	ci right 5.878688e-01	k: 1250752	n:2130000
KS ci ratio: 2.244424e-01	ci left: 1.271294e-04	ci right 1.597012e-04	k: 304	n:2130000
CHEK2   2130000 perm   2093 sec   (1018 perm/sec)   p_kst 1.427230e-04   p_cons 5.872075e-01   p_joint 4.661972e-04

Joint ci ratio: 1.238085e-01	ci left: 4.392314e-04	ci right 4.976482e-04	k: 1001	n:2140000
Cons ci ratio: 2.246690e-03	ci left: 5.865540e-01	ci right 5.878738e-01	k: 1256638	n:2140000
KS ci ratio: 2.240754e-01	ci left: 1.269764e-04	ci right 1.594484e-04	k: 305	n:2140000
CHEK2   2140000 perm   2111 sec   (1014 perm/sec)   p_kst 1.425234e-04   p_cons 5.872140e-01   p_joint 4.677570e-04

Joint ci ratio: 1.236852e-01	ci left: 4.380899e-04	ci right 4.962926e-04	k: 1003	n:2150000
Cons ci ratio: 2.241320e-03	ci left: 5.865857e-01	ci right 5.879024e-01	k: 1262575	n:2150000
KS ci ratio: 2.233467e-01	ci left: 1.272639e-04	ci right 1.596891e-04	k: 307	n:2150000
CHEK2   2150000 perm   2128 sec   (1010 perm/sec)   p_kst 1.427907e-04   p_cons 5.872442e-01   p_joint 4.665116e-04

Joint ci ratio: 1.234396e-01	ci left: 4.378563e-04	ci right 4.959040e-04	k: 1007	n:2160000
Cons ci ratio: 2.236058e-03	ci left: 5.866019e-01	ci right 5.879155e-01	k: 1268479	n:2160000
KS ci ratio: 2.229850e-01	ci left: 1.271118e-04	ci right 1.594386e-04	k: 308	n:2160000
CHEK2   2160000 perm   2146 sec   (1007 perm/sec)   p_kst 1.425926e-04   p_cons 5.872588e-01   p_joint 4.662037e-04

Joint ci ratio: 1.231954e-01	ci left: 4.376250e-04	ci right 4.955189e-04	k: 1011	n:2170000
Cons ci ratio: 2.230836e-03	ci left: 5.866174e-01	ci right 5.879280e-01	k: 1274382	n:2170000
KS ci ratio: 2.229851e-01	ci left: 1.265261e-04	ci right 1.587038e-04	k: 308	n:2170000
CHEK2   2170000 perm   2163 sec   (1003 perm/sec)   p_kst 1.419355e-04   p_cons 5.872728e-01   p_joint 4.658986e-04

Joint ci ratio: 1.241815e-01	ci left: 4.285050e-04	ci right 4.856796e-04	k: 995	n:2180000
Cons ci ratio: 2.225948e-03	ci left: 5.865677e-01	ci right 5.878752e-01	k: 1280143	n:2180000
KS ci ratio: 2.229852e-01	ci left: 1.259457e-04	ci right 1.579758e-04	k: 308	n:2180000
CHEK2   2180000 perm   2181 sec   (999 perm/sec)   p_kst 1.412844e-04   p_cons 5.872216e-01   p_joint 4.564220e-04

Joint ci ratio: 1.263581e-01	ci left: 4.115095e-04	ci right 4.674509e-04	k: 961	n:2190000
Cons ci ratio: 2.221039e-03	ci left: 5.865302e-01	ci right 5.878348e-01	k: 1285930	n:2190000
KS ci ratio: 2.219104e-01	ci left: 1.266641e-04	ci right 1.587005e-04	k: 311	n:2190000
CHEK2   2190000 perm   2199 sec   (996 perm/sec)   p_kst 1.420091e-04   p_cons 5.871826e-01   p_joint 4.388128e-04

Joint ci ratio: 1.260310e-01	ci left: 4.118400e-04	ci right 4.676705e-04	k: 966	n:2200000
Cons ci ratio: 2.216012e-03	ci left: 5.865259e-01	ci right 5.878275e-01	k: 1291789	n:2200000
KS ci ratio: 2.219105e-01	ci left: 1.260884e-04	ci right 1.579792e-04	k: 311	n:2200000
CHEK2   2200000 perm   2216 sec   (993 perm/sec)   p_kst 1.413636e-04   p_cons 5.871768e-01   p_joint 4.390909e-04

Joint ci ratio: 1.255127e-01	ci left: 4.134825e-04	ci right 4.692881e-04	k: 974	n:2210000
Cons ci ratio: 2.210928e-03	ci left: 5.865415e-01	ci right 5.878402e-01	k: 1297692	n:2210000
KS ci ratio: 2.215558e-01	ci left: 1.259452e-04	ci right 1.577419e-04	k: 312	n:2210000
CHEK2   2210000 perm   2234 sec   (989 perm/sec)   p_kst 1.411765e-04   p_cons 5.871910e-01   p_joint 4.407240e-04

Joint ci ratio: 1.178420e-01	ci left: 4.688355e-04	ci right 5.279756e-04	k: 1105	n:2220000
Cons ci ratio: 2.205824e-03	ci left: 5.865691e-01	ci right 5.878649e-01	k: 1303622	n:2220000
KS ci ratio: 2.208513e-01	ci left: 1.262289e-04	ci right 1.579821e-04	k: 314	n:2220000
CHEK2   2220000 perm   2252 sec   (986 perm/sec)   p_kst 1.414414e-04   p_cons 5.872171e-01   p_joint 4.977477e-04

Joint ci ratio: 1.177889e-01	ci left: 4.671683e-04	ci right 5.260697e-04	k: 1106	n:2230000
Cons ci ratio: 2.200867e-03	ci left: 5.865719e-01	ci right 5.878647e-01	k: 1309497	n:2230000
KS ci ratio: 2.208513e-01	ci left: 1.256628e-04	ci right 1.572737e-04	k: 314	n:2230000
CHEK2   2230000 perm   2270 sec   (982 perm/sec)   p_kst 1.408072e-04   p_cons 5.872184e-01   p_joint 4.959641e-04

Joint ci ratio: 1.174709e-01	ci left: 4.676825e-04	ci right 5.264785e-04	k: 1112	n:2240000
Cons ci ratio: 2.195905e-03	ci left: 5.865831e-01	ci right 5.878730e-01	k: 1315391	n:2240000
KS ci ratio: 2.201535e-01	ci left: 1.259454e-04	ci right 1.575136e-04	k: 316	n:2240000
CHEK2   2240000 perm   2289 sec   (979 perm/sec)   p_kst 1.410714e-04   p_cons 5.872281e-01   p_joint 4.964286e-04

Joint ci ratio: 1.178424e-01	ci left: 4.625843e-04	ci right 5.209361e-04	k: 1105	n:2250000
Cons ci ratio: 2.191142e-03	ci left: 5.865572e-01	ci right 5.878443e-01	k: 1321202	n:2250000
KS ci ratio: 2.198071e-01	ci left: 1.258056e-04	ci right 1.572825e-04	k: 317	n:2250000
CHEK2   2250000 perm   2307 sec   (975 perm/sec)   p_kst 1.408889e-04   p_cons 5.872009e-01   p_joint 4.911111e-04

Joint ci ratio: 1.188138e-01	ci left: 4.528085e-04	ci right 5.104310e-04	k: 1087	n:2260000
Cons ci ratio: 2.186230e-03	ci left: 5.865719e-01	ci right 5.878561e-01	k: 1327104	n:2260000
KS ci ratio: 2.194623e-01	ci left: 1.256670e-04	ci right 1.570533e-04	k: 318	n:2260000
CHEK2   2260000 perm   2325 sec   (972 perm/sec)   p_kst 1.407080e-04   p_cons 5.872142e-01   p_joint 4.809735e-04

Joint ci ratio: 1.185417e-01	ci left: 4.529510e-04	ci right 5.104504e-04	k: 1092	n:2270000
Cons ci ratio: 2.181373e-03	ci left: 5.865812e-01	ci right 5.878626e-01	k: 1332994	n:2270000
KS ci ratio: 2.184375e-01	ci left: 1.263625e-04	ci right 1.577554e-04	k: 321	n:2270000
CHEK2   2270000 perm   2343 sec   (969 perm/sec)   p_kst 1.414097e-04   p_cons 5.872220e-01   p_joint 4.810573e-04

Joint ci ratio: 1.183794e-01	ci left: 4.522411e-04	ci right 5.095663e-04	k: 1095	n:2280000
Cons ci ratio: 2.176587e-03	ci left: 5.865821e-01	ci right 5.878607e-01	k: 1338865	n:2280000
KS ci ratio: 2.184376e-01	ci left: 1.258083e-04	ci right 1.570635e-04	k: 321	n:2280000
CHEK2   2280000 perm   2361 sec   (966 perm/sec)   p_kst 1.407895e-04   p_cons 5.872215e-01   p_joint 4.802632e-04

Joint ci ratio: 1.180031e-01	ci left: 4.532327e-04	ci right 5.104882e-04	k: 1102	n:2290000
Cons ci ratio: 2.171753e-03	ci left: 5.866004e-01	ci right 5.878762e-01	k: 1344776	n:2290000
KS ci ratio: 2.177623e-01	ci left: 1.260846e-04	ci right 1.572986e-04	k: 323	n:2290000
CHEK2   2290000 perm   2380 sec   (962 perm/sec)   p_kst 1.410480e-04   p_cons 5.872384e-01   p_joint 4.812227e-04

Joint ci ratio: 1.176835e-01	ci left: 4.537939e-04	ci right 5.109543e-04	k: 1108	n:2300000
Cons ci ratio: 2.167020e-03	ci left: 5.866034e-01	ci right 5.878764e-01	k: 1350652	n:2300000
KS ci ratio: 2.170933e-01	ci left: 1.263586e-04	ci right 1.575315e-04	k: 325	n:2300000
CHEK2   2300000 perm   2398 sec   (959 perm/sec)   p_kst 1.413043e-04   p_cons 5.872400e-01   p_joint 4.817391e-04

Joint ci ratio: 1.174718e-01	ci left: 4.535101e-04	ci right 5.105248e-04	k: 1112	n:2310000
Cons ci ratio: 2.162379e-03	ci left: 5.865925e-01	ci right 5.878627e-01	k: 1356496	n:2310000
KS ci ratio: 2.164304e-01	ci left: 1.266304e-04	ci right 1.577623e-04	k: 327	n:2310000
CHEK2   2310000 perm   2417 sec   (956 perm/sec)   p_kst 1.415584e-04   p_cons 5.872277e-01   p_joint 4.813853e-04

Joint ci ratio: 1.180571e-01	ci left: 4.469535e-04	ci right 5.034434e-04	k: 1101	n:2320000
Cons ci ratio: 2.157737e-03	ci left: 5.865886e-01	ci right 5.878560e-01	k: 1362356	n:2320000
KS ci ratio: 2.161012e-01	ci left: 1.264923e-04	ci right 1.575367e-04	k: 328	n:2320000
CHEK2   2320000 perm   2435 sec   (953 perm/sec)   p_kst 1.413793e-04   p_cons 5.872224e-01   p_joint 4.745690e-04

Joint ci ratio: 1.177370e-01	ci left: 4.475344e-04	ci right 5.039337e-04	k: 1107	n:2330000
Cons ci ratio: 2.153135e-03	ci left: 5.865825e-01	ci right 5.878473e-01	k: 1368211	n:2330000
KS ci ratio: 2.157736e-01	ci left: 1.263554e-04	ci right 1.573129e-04	k: 329	n:2330000
CHEK2   2330000 perm   2454 sec   (950 perm/sec)   p_kst 1.412017e-04   p_cons 5.872150e-01   p_joint 4.751073e-04

Joint ci ratio: 1.176840e-01	ci left: 4.460367e-04	ci right 5.022201e-04	k: 1108	n:2340000
Cons ci ratio: 2.148467e-03	ci left: 5.865979e-01	ci right 5.878600e-01	k: 1374116	n:2340000
KS ci ratio: 2.157736e-01	ci left: 1.258154e-04	ci right 1.566406e-04	k: 329	n:2340000
CHEK2   2340000 perm   2473 sec   (946 perm/sec)   p_kst 1.405983e-04   p_cons 5.872291e-01   p_joint 4.735043e-04

Joint ci ratio: 1.173142e-01	ci left: 4.470298e-04	ci right 5.031492e-04	k: 1115	n:2350000
Cons ci ratio: 2.143933e-03	ci left: 5.865898e-01	ci right 5.878491e-01	k: 1379966	n:2350000
KS ci ratio: 2.154475e-01	ci left: 1.256826e-04	ci right 1.564225e-04	k: 330	n:2350000
CHEK2   2350000 perm   2491 sec   (943 perm/sec)   p_kst 1.404255e-04   p_cons 5.872196e-01   p_joint 4.744681e-04

Joint ci ratio: 1.110228e-01	ci left: 4.986493e-04	ci right 5.576723e-04	k: 1245	n:2360000
Cons ci ratio: 2.139368e-03	ci left: 5.865953e-01	ci right 5.878520e-01	k: 1385848	n:2360000
KS ci ratio: 2.147995e-01	ci left: 1.259518e-04	ci right 1.566528e-04	k: 332	n:2360000
CHEK2   2360000 perm   2510 sec   (940 perm/sec)   p_kst 1.406780e-04   p_cons 5.872237e-01   p_joint 5.275424e-04

Joint ci ratio: 1.107565e-01	ci left: 4.990067e-04	ci right 5.579211e-04	k: 1251	n:2370000
Cons ci ratio: 2.134835e-03	ci left: 5.865999e-01	ci right 5.878539e-01	k: 1391728	n:2370000
KS ci ratio: 2.144777e-01	ci left: 1.258196e-04	ci right 1.564364e-04	k: 333	n:2370000
CHEK2   2370000 perm   2529 sec   (937 perm/sec)   p_kst 1.405063e-04   p_cons 5.872270e-01   p_joint 5.278481e-04

Joint ci ratio: 1.106241e-01	ci left: 4.981356e-04	ci right 5.568723e-04	k: 1254	n:2380000
Cons ci ratio: 2.130333e-03	ci left: 5.866040e-01	ci right 5.878554e-01	k: 1397607	n:2380000
KS ci ratio: 2.141574e-01	ci left: 1.256886e-04	ci right 1.562218e-04	k: 334	n:2380000
CHEK2   2380000 perm   2548 sec   (934 perm/sec)   p_kst 1.403361e-04   p_cons 5.872298e-01   p_joint 5.268908e-04

Joint ci ratio: 1.113365e-01	ci left: 4.895425e-04	ci right 5.476621e-04	k: 1238	n:2390000
Cons ci ratio: 2.125795e-03	ci left: 5.866228e-01	ci right 5.878716e-01	k: 1403521	n:2390000
KS ci ratio: 2.141574e-01	ci left: 1.251627e-04	ci right 1.555681e-04	k: 334	n:2390000
CHEK2   2390000 perm   2567 sec   (931 perm/sec)   p_kst 1.397490e-04   p_cons 5.872473e-01   p_joint 5.179916e-04

Joint ci ratio: 1.110679e-01	ci left: 4.899332e-04	ci right 5.479497e-04	k: 1244	n:2400000
Cons ci ratio: 2.121470e-03	ci left: 5.865993e-01	ci right 5.878455e-01	k: 1409334	n:2400000
KS ci ratio: 2.135210e-01	ci left: 1.254299e-04	ci right 1.557978e-04	k: 336	n:2400000
CHEK2   2400000 perm   2586 sec   (928 perm/sec)   p_kst 1.400000e-04   p_cons 5.872225e-01   p_joint 5.183333e-04

Joint ci ratio: 1.108456e-01	ci left: 4.899174e-04	ci right 5.478083e-04	k: 1249	n:2410000
Cons ci ratio: 2.117081e-03	ci left: 5.865968e-01	ci right 5.878404e-01	k: 1415197	n:2410000
KS ci ratio: 2.132049e-01	ci left: 1.253022e-04	ci right 1.555884e-04	k: 337	n:2410000
CHEK2   2410000 perm   2606 sec   (925 perm/sec)   p_kst 1.398340e-04   p_cons 5.872187e-01   p_joint 5.182573e-04

Joint ci ratio: 1.104925e-01	ci left: 4.911073e-04	ci right 5.489418e-04	k: 1257	n:2420000
Cons ci ratio: 2.112708e-03	ci left: 5.865967e-01	ci right 5.878378e-01	k: 1421066	n:2420000
KS ci ratio: 2.122649e-01	ci left: 1.259580e-04	ci right 1.562511e-04	k: 340	n:2420000
CHEK2   2420000 perm   2625 sec   (922 perm/sec)   p_kst 1.404959e-04   p_cons 5.872174e-01   p_joint 5.194215e-04

Joint ci ratio: 1.102736e-01	ci left: 4.910871e-04	ci right 5.487972e-04	k: 1262	n:2430000
Cons ci ratio: 2.108335e-03	ci left: 5.866029e-01	ci right 5.878413e-01	k: 1426950	n:2430000
KS ci ratio: 2.122650e-01	ci left: 1.254397e-04	ci right 1.556081e-04	k: 340	n:2430000
CHEK2   2430000 perm   2644 sec   (919 perm/sec)   p_kst 1.399177e-04   p_cons 5.872222e-01   p_joint 5.193416e-04

Joint ci ratio: 1.105367e-01	ci left: 4.866832e-04	ci right 5.440212e-04	k: 1256	n:2440000
Cons ci ratio: 2.104062e-03	ci left: 5.865922e-01	ci right 5.878281e-01	k: 1432793	n:2440000
KS ci ratio: 2.122650e-01	ci left: 1.249256e-04	ci right 1.549704e-04	k: 340	n:2440000
CHEK2   2440000 perm   2664 sec   (916 perm/sec)   p_kst 1.393443e-04   p_cons 5.872102e-01   p_joint 5.147541e-04

Joint ci ratio: 1.112923e-01	ci left: 4.779504e-04	ci right 5.346697e-04	k: 1239	n:2450000
Cons ci ratio: 2.099686e-03	ci left: 5.866114e-01	ci right 5.878448e-01	k: 1438709	n:2450000
KS ci ratio: 2.116452e-01	ci left: 1.251887e-04	ci right 1.551974e-04	k: 342	n:2450000
CHEK2   2450000 perm   2683 sec   (913 perm/sec)   p_kst 1.395918e-04   p_cons 5.872282e-01   p_joint 5.057143e-04

Joint ci ratio: 1.112027e-01	ci left: 4.767978e-04	ci right 5.333319e-04	k: 1241	n:2460000
Cons ci ratio: 2.095413e-03	ci left: 5.866129e-01	ci right 5.878438e-01	k: 1444582	n:2460000
KS ci ratio: 2.116453e-01	ci left: 1.246798e-04	ci right 1.545666e-04	k: 342	n:2460000
CHEK2   2460000 perm   2703 sec   (910 perm/sec)   p_kst 1.390244e-04   p_cons 5.872285e-01   p_joint 5.044715e-04

Joint ci ratio: 1.110241e-01	ci left: 4.764419e-04	ci right 5.328370e-04	k: 1245	n:2470000
Cons ci ratio: 2.091133e-03	ci left: 5.866221e-01	ci right 5.878505e-01	k: 1450474	n:2470000
KS ci ratio: 2.116454e-01	ci left: 1.241750e-04	ci right 1.539408e-04	k: 342	n:2470000
CHEK2   2470000 perm   2723 sec   (907 perm/sec)   p_kst 1.384615e-04   p_cons 5.872364e-01   p_joint 5.040486e-04

Joint ci ratio: 1.104932e-01	ci left: 4.792255e-04	ci right 5.356612e-04	k: 1257	n:2480000
Cons ci ratio: 2.086908e-03	ci left: 5.866245e-01	ci right 5.878503e-01	k: 1456349	n:2480000
KS ci ratio: 2.101193e-01	ci left: 1.255840e-04	ci right 1.554425e-04	k: 347	n:2480000
CHEK2   2480000 perm   2742 sec   (904 perm/sec)   p_kst 1.399194e-04   p_cons 5.872375e-01   p_joint 5.068548e-04

Joint ci ratio: 1.103180e-01	ci left: 4.788629e-04	ci right 5.351607e-04	k: 1261	n:2490000
Cons ci ratio: 2.082796e-03	ci left: 5.866063e-01	ci right 5.878297e-01	k: 1462173	n:2490000
KS ci ratio: 2.101193e-01	ci left: 1.250796e-04	ci right 1.548182e-04	k: 347	n:2490000
CHEK2   2490000 perm   2762 sec   (901 perm/sec)   p_kst 1.393574e-04   p_cons 5.872181e-01   p_joint 5.064257e-04

Joint ci ratio: 1.101001e-01	ci left: 4.788924e-04	ci right 5.350752e-04	k: 1266	n:2500000
Cons ci ratio: 2.078493e-03	ci left: 5.866386e-01	ci right 5.878596e-01	k: 1468123	n:2500000
KS ci ratio: 2.098181e-01	ci left: 1.249583e-04	ci right 1.546200e-04	k: 348	n:2500000
CHEK2   2500000 perm   2782 sec   (899 perm/sec)   p_kst 1.392000e-04   p_cons 5.872492e-01   p_joint 5.064000e-04

Joint ci ratio: 1.106256e-01	ci left: 4.723354e-04	ci right 5.280307e-04	k: 1254	n:2510000
Cons ci ratio: 2.074358e-03	ci left: 5.866376e-01	ci right 5.878562e-01	k: 1473990	n:2510000
KS ci ratio: 2.095182e-01	ci left: 1.248379e-04	ci right 1.544233e-04	k: 349	n:2510000
CHEK2   2510000 perm   2802 sec   (896 perm/sec)   p_kst 1.390438e-04   p_cons 5.872470e-01   p_joint 4.996016e-04

Joint ci ratio: 1.103183e-01	ci left: 4.731621e-04	ci right 5.287898e-04	k: 1261	n:2520000
Cons ci ratio: 2.070183e-03	ci left: 5.866518e-01	ci right 5.878679e-01	k: 1479895	n:2520000
KS ci ratio: 2.089221e-01	ci left: 1.250946e-04	ci right 1.546456e-04	k: 351	n:2520000
CHEK2   2520000 perm   2822 sec   (893 perm/sec)   p_kst 1.392857e-04   p_cons 5.872599e-01   p_joint 5.003968e-04

Joint ci ratio: 1.102747e-01	ci left: 4.716762e-04	ci right 5.271059e-04	k: 1262	n:2530000
Cons ci ratio: 2.066047e-03	ci left: 5.866626e-01	ci right 5.878763e-01	k: 1485792	n:2530000
KS ci ratio: 2.089221e-01	ci left: 1.246002e-04	ci right 1.540344e-04	k: 351	n:2530000
CHEK2   2530000 perm   2843 sec   (890 perm/sec)   p_kst 1.387352e-04   p_cons 5.872696e-01   p_joint 4.988142e-04

Joint ci ratio: 1.101005e-01	ci left: 4.713506e-04	ci right 5.266489e-04	k: 1266	n:2540000
Cons ci ratio: 2.061930e-03	ci left: 5.866746e-01	ci right 5.878859e-01	k: 1491692	n:2540000
KS ci ratio: 2.089222e-01	ci left: 1.241096e-04	ci right 1.534280e-04	k: 351	n:2540000
CHEK2   2540000 perm   2863 sec   (887 perm/sec)   p_kst 1.381890e-04   p_cons 5.872803e-01   p_joint 4.984252e-04

Joint ci ratio: 1.099704e-01	ci left: 4.706463e-04	ci right 5.257925e-04	k: 1269	n:2550000
Cons ci ratio: 2.057904e-03	ci left: 5.866707e-01	ci right 5.878797e-01	k: 1497552	n:2550000
KS ci ratio: 2.086261e-01	ci left: 1.239945e-04	ci right 1.532389e-04	k: 352	n:2550000
CHEK2   2550000 perm   2884 sec   (884 perm/sec)   p_kst 1.380392e-04   p_cons 5.872753e-01   p_joint 4.976471e-04

Joint ci ratio: 1.097977e-01	ci left: 4.703274e-04	ci right 5.253440e-04	k: 1273	n:2560000
Cons ci ratio: 2.053876e-03	ci left: 5.866732e-01	ci right 5.878797e-01	k: 1503428	n:2560000
KS ci ratio: 2.080375e-01	ci left: 1.242507e-04	ci right 1.534623e-04	k: 354	n:2560000
CHEK2   2560000 perm   2904 sec   (881 perm/sec)   p_kst 1.382813e-04   p_cons 5.872766e-01   p_joint 4.972656e-04

Joint ci ratio: 1.101443e-01	ci left: 4.654700e-04	ci right 5.201015e-04	k: 1265	n:2570000
Cons ci ratio: 2.049885e-03	ci left: 5.866721e-01	ci right 5.878763e-01	k: 1509295	n:2570000
KS ci ratio: 2.071640e-01	ci left: 1.248739e-04	ci right 1.540930e-04	k: 357	n:2570000
CHEK2   2570000 perm   2925 sec   (879 perm/sec)   p_kst 1.389105e-04   p_cons 5.872743e-01   p_joint 4.922179e-04

Joint ci ratio: 1.099275e-01	ci left: 4.655505e-04	ci right 5.200769e-04	k: 1270	n:2580000
Cons ci ratio: 2.045905e-03	ci left: 5.866742e-01	ci right 5.878760e-01	k: 1515170	n:2580000
KS ci ratio: 2.071640e-01	ci left: 1.243898e-04	ci right 1.534958e-04	k: 357	n:2580000
CHEK2   2580000 perm   2946 sec   (876 perm/sec)   p_kst 1.383721e-04   p_cons 5.872752e-01   p_joint 4.922481e-04

Joint ci ratio: 1.103628e-01	ci left: 4.599983e-04	ci right 5.141017e-04	k: 1260	n:2590000
Cons ci ratio: 2.041943e-03	ci left: 5.866773e-01	ci right 5.878769e-01	k: 1521048	n:2590000
KS ci ratio: 2.063014e-01	ci left: 1.250079e-04	ci right 1.541213e-04	k: 360	n:2590000
CHEK2   2590000 perm   2966 sec   (873 perm/sec)   p_kst 1.389961e-04   p_cons 5.872772e-01   p_joint 4.864865e-04

Joint ci ratio: 1.226557e-01	ci left: 3.686029e-04	ci right 4.171366e-04	k: 1020	n:2600000
Cons ci ratio: 2.038226e-03	ci left: 5.866278e-01	ci right 5.878251e-01	k: 1526789	n:2600000
KS ci ratio: 2.063014e-01	ci left: 1.245271e-04	ci right 1.535285e-04	k: 360	n:2600000
CHEK2   2600000 perm   2986 sec   (871 perm/sec)   p_kst 1.384615e-04   p_cons 5.872265e-01   p_joint 3.923077e-04

Joint ci ratio: 1.222969e-01	ci left: 3.694190e-04	ci right 4.179076e-04	k: 1026	n:2610000
Cons ci ratio: 2.034231e-03	ci left: 5.866496e-01	ci right 5.878445e-01	k: 1532715	n:2610000
KS ci ratio: 2.060163e-01	ci left: 1.244134e-04	ci right 1.533432e-04	k: 361	n:2610000
CHEK2   2610000 perm   3007 sec   (868 perm/sec)   p_kst 1.383142e-04   p_cons 5.872471e-01   p_joint 3.931034e-04

Joint ci ratio: 1.221780e-01	ci left: 3.687490e-04	ci right 4.170992e-04	k: 1028	n:2620000
Cons ci ratio: 2.030373e-03	ci left: 5.866440e-01	ci right 5.878367e-01	k: 1538570	n:2620000
KS ci ratio: 2.057323e-01	ci left: 1.243005e-04	ci right 1.531593e-04	k: 362	n:2620000
CHEK2   2620000 perm   3028 sec   (865 perm/sec)   p_kst 1.381679e-04   p_cons 5.872405e-01   p_joint 3.923664e-04

Joint ci ratio: 1.226560e-01	ci left: 3.643982e-04	ci right 4.123784e-04	k: 1020	n:2630000
Cons ci ratio: 2.026457e-03	ci left: 5.866576e-01	ci right 5.878480e-01	k: 1544475	n:2630000
KS ci ratio: 2.051679e-01	ci left: 1.245492e-04	ci right 1.533764e-04	k: 364	n:2630000
CHEK2   2630000 perm   3049 sec   (863 perm/sec)   p_kst 1.384030e-04   p_cons 5.872529e-01   p_joint 3.878327e-04

Joint ci ratio: 9.432430e-02	ci left: 6.229442e-04	ci right 6.849778e-04	k: 1725	n:2640000
Cons ci ratio: 2.022631e-03	ci left: 5.866551e-01	ci right 5.878432e-01	k: 1550338	n:2640000
KS ci ratio: 2.048874e-01	ci left: 1.244368e-04	ci right 1.531937e-04	k: 365	n:2640000
CHEK2   2640000 perm   3070 sec   (860 perm/sec)   p_kst 1.382576e-04   p_cons 5.872492e-01   p_joint 6.534091e-04

Joint ci ratio: 9.899723e-02	ci left: 5.620421e-04	ci right 6.209449e-04	k: 1566	n:2650000
Cons ci ratio: 2.018942e-03	ci left: 5.866247e-01	ci right 5.878106e-01	k: 1556127	n:2650000
KS ci ratio: 2.043299e-01	ci left: 1.246833e-04	ci right 1.534089e-04	k: 367	n:2650000
CHEK2   2650000 perm   3091 sec   (857 perm/sec)   p_kst 1.384906e-04   p_cons 5.872177e-01   p_joint 5.909434e-04

Joint ci ratio: 9.890266e-02	ci left: 5.610291e-04	ci right 6.197662e-04	k: 1569	n:2660000
Cons ci ratio: 2.015106e-03	ci left: 5.866348e-01	ci right 5.878184e-01	k: 1562023	n:2660000
KS ci ratio: 2.043300e-01	ci left: 1.242145e-04	ci right 1.528322e-04	k: 367	n:2660000
CHEK2   2660000 perm   3113 sec   (855 perm/sec)   p_kst 1.379699e-04   p_cons 5.872267e-01   p_joint 5.898496e-04

Joint ci ratio: 9.476518e-02	ci left: 6.100938e-04	ci right 6.711475e-04	k: 1709	n:2670000
Cons ci ratio: 2.011305e-03	ci left: 5.866418e-01	ci right 5.878232e-01	k: 1567911	n:2670000
KS ci ratio: 2.035021e-01	ci left: 1.248155e-04	ci right 1.534407e-04	k: 370	n:2670000
CHEK2   2670000 perm   3134 sec   (852 perm/sec)   p_kst 1.385768e-04   p_cons 5.872326e-01   p_joint 6.400749e-04

Joint ci ratio: 9.446177e-02	ci left: 6.118247e-04	ci right 6.728448e-04	k: 1720	n:2680000
Cons ci ratio: 2.007702e-03	ci left: 5.866058e-01	ci right 5.877851e-01	k: 1573684	n:2680000
KS ci ratio: 2.024137e-01	ci left: 1.257665e-04	ci right 1.544364e-04	k: 374	n:2680000
CHEK2   2680000 perm   3155 sec   (849 perm/sec)   p_kst 1.395522e-04   p_cons 5.871955e-01   p_joint 6.417910e-04

Joint ci ratio: 9.421569e-02	ci left: 6.128171e-04	ci right 6.737681e-04	k: 1729	n:2690000
Cons ci ratio: 2.003918e-03	ci left: 5.866188e-01	ci right 5.877959e-01	k: 1579588	n:2690000
KS ci ratio: 2.016088e-01	ci left: 1.263578e-04	ci right 1.550339e-04	k: 377	n:2690000
CHEK2   2690000 perm   3177 sec   (847 perm/sec)   p_kst 1.401487e-04   p_cons 5.872074e-01   p_joint 6.427509e-04

Joint ci ratio: 9.435234e-02	ci left: 6.087391e-04	ci right 6.693772e-04	k: 1724	n:2700000
Cons ci ratio: 2.000173e-03	ci left: 5.866273e-01	ci right 5.878022e-01	k: 1585480	n:2700000
KS ci ratio: 2.013427e-01	ci left: 1.262415e-04	ci right 1.548487e-04	k: 378	n:2700000
CHEK2   2700000 perm   3199 sec   (844 perm/sec)   p_kst 1.400000e-04   p_cons 5.872148e-01   p_joint 6.385185e-04

Joint ci ratio: 9.515621e-02	ci left: 5.960451e-04	ci right 6.559528e-04	k: 1695	n:2710000
Cons ci ratio: 1.996473e-03	ci left: 5.866298e-01	ci right 5.878025e-01	k: 1591356	n:2710000
KS ci ratio: 2.010776e-01	ci left: 1.261261e-04	ci right 1.546649e-04	k: 379	n:2710000
CHEK2   2710000 perm   3221 sec   (841 perm/sec)   p_kst 1.398524e-04   p_cons 5.872162e-01   p_joint 6.254613e-04

Joint ci ratio: 9.512826e-02	ci left: 5.942127e-04	ci right 6.539176e-04	k: 1696	n:2720000
Cons ci ratio: 1.992803e-03	ci left: 5.866301e-01	ci right 5.878006e-01	k: 1597226	n:2720000
KS ci ratio: 2.008136e-01	ci left: 1.260115e-04	ci right 1.544824e-04	k: 380	n:2720000
CHEK2   2720000 perm   3243 sec   (839 perm/sec)   p_kst 1.397059e-04   p_cons 5.872154e-01   p_joint 6.235294e-04

Joint ci ratio: 9.501638e-02	ci left: 5.934664e-04	ci right 6.530224e-04	k: 1700	n:2730000
Cons ci ratio: 1.989131e-03	ci left: 5.866359e-01	ci right 5.878043e-01	k: 1603111	n:2730000
KS ci ratio: 2.005506e-01	ci left: 1.258978e-04	ci right 1.543012e-04	k: 381	n:2730000
CHEK2   2730000 perm   3266 sec   (836 perm/sec)   p_kst 1.395604e-04   p_cons 5.872201e-01   p_joint 6.227106e-04

Joint ci ratio: 9.482146e-02	ci left: 5.937946e-04	ci right 6.532544e-04	k: 1707	n:2740000
Cons ci ratio: 1.985471e-03	ci left: 5.866434e-01	ci right 5.878097e-01	k: 1609001	n:2740000
KS ci ratio: 2.002886e-01	ci left: 1.257850e-04	ci right 1.541213e-04	k: 382	n:2740000
CHEK2   2740000 perm   3288 sec   (833 perm/sec)   p_kst 1.394161e-04   p_cons 5.872266e-01   p_joint 6.229927e-04

Joint ci ratio: 9.476607e-02	ci left: 5.923453e-04	ci right 6.516235e-04	k: 1709	n:2750000
Cons ci ratio: 1.981886e-03	ci left: 5.866375e-01	ci right 5.878016e-01	k: 1614854	n:2750000
KS ci ratio: 2.002887e-01	ci left: 1.253276e-04	ci right 1.535609e-04	k: 382	n:2750000
CHEK2   2750000 perm   3310 sec   (831 perm/sec)   p_kst 1.389091e-04   p_cons 5.872196e-01   p_joint 6.214545e-04

Joint ci ratio: 9.465546e-02	ci left: 5.916141e-04	ci right 6.507462e-04	k: 1713	n:2760000
Cons ci ratio: 1.978296e-03	ci left: 5.866377e-01	ci right 5.877998e-01	k: 1620724	n:2760000
KS ci ratio: 1.997677e-01	ci left: 1.255619e-04	ci right 1.537654e-04	k: 384	n:2760000
CHEK2   2760000 perm   3331 sec   (828 perm/sec)   p_kst 1.391304e-04   p_cons 5.872188e-01   p_joint 6.206522e-04

Joint ci ratio: 9.457279e-02	ci left: 5.905357e-04	ci right 6.495056e-04	k: 1716	n:2770000
Cons ci ratio: 1.974775e-03	ci left: 5.866257e-01	ci right 5.877857e-01	k: 1626560	n:2770000
KS ci ratio: 1.995088e-01	ci left: 1.254515e-04	ci right 1.535893e-04	k: 385	n:2770000
CHEK2   2770000 perm   3354 sec   (826 perm/sec)   p_kst 1.389892e-04   p_cons 5.872058e-01   p_joint 6.194946e-04

Joint ci ratio: 9.440798e-02	ci left: 5.905187e-04	ci right 6.493785e-04	k: 1722	n:2780000
Cons ci ratio: 1.971217e-03	ci left: 5.866275e-01	ci right 5.877853e-01	k: 1632434	n:2780000
KS ci ratio: 1.984830e-01	ci left: 1.263674e-04	ci right 1.545472e-04	k: 389	n:2780000
CHEK2   2780000 perm   3376 sec   (824 perm/sec)   p_kst 1.399281e-04   p_cons 5.872065e-01   p_joint 6.194245e-04

Joint ci ratio: 9.424404e-02	ci left: 5.905020e-04	ci right 6.492522e-04	k: 1728	n:2790000
Cons ci ratio: 1.967590e-03	ci left: 5.866511e-01	ci right 5.878068e-01	k: 1638369	n:2790000
KS ci ratio: 1.982290e-01	ci left: 1.262551e-04	ci right 1.543695e-04	k: 390	n:2790000
CHEK2   2790000 perm   3398 sec   (821 perm/sec)   p_kst 1.397849e-04   p_cons 5.872290e-01   p_joint 6.193548e-04

Joint ci ratio: 9.416244e-02	ci left: 5.894392e-04	ci right 6.480301e-04	k: 1731	n:2800000
Cons ci ratio: 1.963985e-03	ci left: 5.866738e-01	ci right 5.878275e-01	k: 1644302	n:2800000
KS ci ratio: 1.982290e-01	ci left: 1.258042e-04	ci right 1.538182e-04	k: 390	n:2800000
CHEK2   2800000 perm   3420 sec   (819 perm/sec)   p_kst 1.392857e-04   p_cons 5.872507e-01   p_joint 6.182143e-04

Joint ci ratio: 9.504518e-02	ci left: 5.762229e-04	ci right 6.340669e-04	k: 1699	n:2810000
Cons ci ratio: 1.960445e-03	ci left: 5.866853e-01	ci right 5.878369e-01	k: 1650204	n:2810000
KS ci ratio: 1.982291e-01	ci left: 1.253565e-04	ci right 1.532708e-04	k: 390	n:2810000
CHEK2   2810000 perm   3442 sec   (816 perm/sec)   p_kst 1.387900e-04   p_cons 5.872612e-01   p_joint 6.046263e-04

Joint ci ratio: 9.476680e-02	ci left: 5.776415e-04	ci right 6.354487e-04	k: 1709	n:2820000
Cons ci ratio: 1.957054e-03	ci left: 5.866645e-01	ci right 5.878141e-01	k: 1656015	n:2820000
KS ci ratio: 1.974729e-01	ci left: 1.259231e-04	ci right 1.538437e-04	k: 393	n:2820000
CHEK2   2820000 perm   3464 sec   (814 perm/sec)   p_kst 1.393617e-04   p_cons 5.872394e-01   p_joint 6.060284e-04

Joint ci ratio: 9.446338e-02	ci left: 5.793954e-04	ci right 6.371821e-04	k: 1720	n:2830000
Cons ci ratio: 1.953675e-03	ci left: 5.866452e-01	ci right 5.877928e-01	k: 1661830	n:2830000
KS ci ratio: 1.972228e-01	ci left: 1.258141e-04	ci right 1.536709e-04	k: 394	n:2830000
CHEK2   2830000 perm   3486 sec   (812 perm/sec)   p_kst 1.392226e-04   p_cons 5.872191e-01   p_joint 6.077739e-04

Joint ci ratio: 9.432647e-02	ci left: 5.790742e-04	ci right 6.367406e-04	k: 1725	n:2840000
Cons ci ratio: 1.950232e-03	ci left: 5.866465e-01	ci right 5.877920e-01	k: 1667703	n:2840000
KS ci ratio: 1.972229e-01	ci left: 1.253710e-04	ci right 1.531298e-04	k: 394	n:2840000
CHEK2   2840000 perm   3509 sec   (809 perm/sec)   p_kst 1.387324e-04   p_cons 5.872194e-01   p_joint 6.073944e-04

Joint ci ratio: 9.400017e-02	ci left: 5.811538e-04	ci right 6.388161e-04	k: 1737	n:2850000
Cons ci ratio: 1.946936e-03	ci left: 5.866155e-01	ci right 5.877591e-01	k: 1673484	n:2850000
KS ci ratio: 1.959862e-01	ci left: 1.265992e-04	ci right 1.544332e-04	k: 399	n:2850000
CHEK2   2850000 perm   3531 sec   (807 perm/sec)   p_kst 1.400000e-04   p_cons 5.871874e-01   p_joint 6.094737e-04

Joint ci ratio: 9.373084e-02	ci left: 5.825362e-04	ci right 6.401610e-04	k: 1747	n:2860000
Cons ci ratio: 1.943485e-03	ci left: 5.866274e-01	ci right 5.877689e-01	k: 1679387	n:2860000
KS ci ratio: 1.952553e-01	ci left: 1.271541e-04	ci right 1.549934e-04	k: 402	n:2860000
CHEK2   2860000 perm   3554 sec   (805 perm/sec)   p_kst 1.405594e-04   p_cons 5.871983e-01   p_joint 6.108392e-04

Joint ci ratio: 9.349042e-02	ci left: 5.835690e-04	ci right 6.411397e-04	k: 1756	n:2870000
Cons ci ratio: 1.940067e-03	ci left: 5.866357e-01	ci right 5.877753e-01	k: 1685280	n:2870000
KS ci ratio: 1.950135e-01	ci left: 1.270425e-04	ci right 1.548188e-04	k: 403	n:2870000
CHEK2   2870000 perm   3576 sec   (802 perm/sec)   p_kst 1.404181e-04   p_cons 5.872056e-01   p_joint 6.118467e-04

Joint ci ratio: 9.322544e-02	ci left: 5.849339e-04	ci right 6.424668e-04	k: 1766	n:2880000
Cons ci ratio: 1.936784e-03	ci left: 5.866148e-01	ci right 5.877524e-01	k: 1691089	n:2880000
KS ci ratio: 1.945326e-01	ci left: 1.272619e-04	ci right 1.550095e-04	k: 405	n:2880000
CHEK2   2880000 perm   3599 sec   (800 perm/sec)   p_kst 1.406250e-04   p_cons 5.871837e-01   p_joint 6.131944e-04

Joint ci ratio: 9.309384e-02	ci left: 5.845997e-04	ci right 6.420141e-04	k: 1771	n:2890000
Cons ci ratio: 1.933343e-03	ci left: 5.866377e-01	ci right 5.877732e-01	k: 1697024	n:2890000
KS ci ratio: 1.940552e-01	ci left: 1.274800e-04	ci right 1.551988e-04	k: 407	n:2890000
CHEK2   2890000 perm   3622 sec   (798 perm/sec)   p_kst 1.408304e-04   p_cons 5.872055e-01   p_joint 6.128028e-04

Joint ci ratio: 9.306767e-02	ci left: 5.829206e-04	ci right 6.401532e-04	k: 1772	n:2900000
Cons ci ratio: 1.930001e-03	ci left: 5.866400e-01	ci right 5.877736e-01	k: 1702900	n:2900000
KS ci ratio: 1.940552e-01	ci left: 1.270404e-04	ci right 1.546637e-04	k: 407	n:2900000
CHEK2   2900000 perm   3646 sec   (795 perm/sec)   p_kst 1.403448e-04   p_cons 5.872069e-01   p_joint 6.110345e-04

Joint ci ratio: 9.291059e-02	ci left: 5.829313e-04	ci right 6.400631e-04	k: 1778	n:2910000
Cons ci ratio: 1.926737e-03	ci left: 5.866272e-01	ci right 5.877589e-01	k: 1708732	n:2910000
KS ci ratio: 1.938179e-01	ci left: 1.269308e-04	ci right 1.544925e-04	k: 408	n:2910000
CHEK2   2910000 perm   3669 sec   (793 perm/sec)   p_kst 1.402062e-04   p_cons 5.871931e-01   p_joint 6.109966e-04

Joint ci ratio: 9.278032e-02	ci left: 5.826076e-04	ci right 6.396232e-04	k: 1783	n:2920000
Cons ci ratio: 1.923512e-03	ci left: 5.866087e-01	ci right 5.877384e-01	k: 1714547	n:2920000
KS ci ratio: 1.935814e-01	ci left: 1.268219e-04	ci right 1.543224e-04	k: 409	n:2920000
CHEK2   2920000 perm   3693 sec   (791 perm/sec)   p_kst 1.400685e-04   p_cons 5.871736e-01   p_joint 6.106164e-04

Joint ci ratio: 9.270246e-02	ci left: 5.816193e-04	ci right 6.384878e-04	k: 1786	n:2930000
Cons ci ratio: 1.920276e-03	ci left: 5.865971e-01	ci right 5.877249e-01	k: 1720382	n:2930000
KS ci ratio: 1.935814e-01	ci left: 1.263891e-04	ci right 1.537957e-04	k: 409	n:2930000
CHEK2   2930000 perm   3717 sec   (788 perm/sec)   p_kst 1.395904e-04   p_cons 5.871611e-01   p_joint 6.095563e-04

Joint ci ratio: 9.249562e-02	ci left: 5.822991e-04	ci right 6.391002e-04	k: 1794	n:2940000
Cons ci ratio: 1.917010e-03	ci left: 5.865975e-01	ci right 5.877234e-01	k: 1726252	n:2940000
KS ci ratio: 1.933458e-01	ci left: 1.262829e-04	ci right 1.536292e-04	k: 410	n:2940000
CHEK2   2940000 perm   3741 sec   (786 perm/sec)   p_kst 1.394558e-04   p_cons 5.871605e-01   p_joint 6.102041e-04

Joint ci ratio: 9.378542e-02	ci left: 5.641016e-04	ci right 6.199371e-04	k: 1745	n:2950000
Cons ci ratio: 1.913697e-03	ci left: 5.866138e-01	ci right 5.877378e-01	k: 1732169	n:2950000
KS ci ratio: 1.933458e-01	ci left: 1.258548e-04	ci right 1.531085e-04	k: 410	n:2950000
CHEK2   2950000 perm   3765 sec   (784 perm/sec)   p_kst 1.389831e-04   p_cons 5.871759e-01   p_joint 5.915254e-04

Joint ci ratio: 9.359796e-02	ci left: 5.645053e-04	ci right 6.202630e-04	k: 1752	n:2960000
Cons ci ratio: 1.910399e-03	ci left: 5.866308e-01	ci right 5.877529e-01	k: 1738088	n:2960000
KS ci ratio: 1.928771e-01	ci left: 1.260726e-04	ci right 1.532995e-04	k: 412	n:2960000
CHEK2   2960000 perm   3788 sec   (781 perm/sec)   p_kst 1.391892e-04   p_cons 5.871919e-01   p_joint 5.918919e-04

Joint ci ratio: 9.341163e-02	ci left: 5.649064e-04	ci right 6.205865e-04	k: 1759	n:2970000
Cons ci ratio: 1.907260e-03	ci left: 5.866115e-01	ci right 5.877317e-01	k: 1743900	n:2970000
KS ci ratio: 1.919497e-01	ci left: 1.269301e-04	ci right 1.541949e-04	k: 416	n:2970000
CHEK2   2970000 perm   3811 sec   (779 perm/sec)   p_kst 1.400673e-04   p_cons 5.871717e-01   p_joint 5.922559e-04

Joint ci ratio: 9.325281e-02	ci left: 5.649772e-04	ci right 6.205644e-04	k: 1765	n:2980000
Cons ci ratio: 1.904074e-03	ci left: 5.866082e-01	ci right 5.877265e-01	k: 1749759	n:2980000
KS ci ratio: 1.914910e-01	ci left: 1.271430e-04	ci right 1.543808e-04	k: 418	n:2980000
CHEK2   2980000 perm   3835 sec   (777 perm/sec)   p_kst 1.402685e-04   p_cons 5.871674e-01   p_joint 5.922819e-04

Joint ci ratio: 9.304227e-02	ci left: 5.657009e-04	ci right 6.212268e-04	k: 1773	n:2990000
Cons ci ratio: 1.900868e-03	ci left: 5.866139e-01	ci right 5.877304e-01	k: 1755645	n:2990000
KS ci ratio: 1.908091e-01	ci left: 1.276731e-04	ci right 1.549158e-04	k: 421	n:2990000
CHEK2   2990000 perm   3858 sec   (775 perm/sec)   p_kst 1.408027e-04   p_cons 5.871722e-01   p_joint 5.929766e-04

Joint ci ratio: 9.293758e-02	ci left: 5.651176e-04	ci right 6.205204e-04	k: 1777	n:3000000
Cons ci ratio: 1.897745e-03	ci left: 5.866026e-01	ci right 5.877172e-01	k: 1761480	n:3000000
KS ci ratio: 1.901344e-01	ci left: 1.281999e-04	ci right 1.554470e-04	k: 424	n:3000000
CHEK2   3000000 perm   3882 sec   (773 perm/sec)   p_kst 1.413333e-04   p_cons 5.871600e-01   p_joint 5.923333e-04

Joint ci ratio: 9.283325e-02	ci left: 5.645381e-04	ci right 6.198187e-04	k: 1781	n:3010000
Cons ci ratio: 1.894600e-03	ci left: 5.866010e-01	ci right 5.877138e-01	k: 1767344	n:3010000
KS ci ratio: 1.901345e-01	ci left: 1.277740e-04	ci right 1.549306e-04	k: 424	n:3010000
CHEK2   3010000 perm   3906 sec   (771 perm/sec)   p_kst 1.408638e-04   p_cons 5.871575e-01   p_joint 5.916944e-04

Joint ci ratio: 9.265144e-02	ci left: 5.649329e-04	ci right 6.201379e-04	k: 1788	n:3020000
Cons ci ratio: 1.891509e-03	ci left: 5.865895e-01	ci right 5.877004e-01	k: 1773178	n:3020000
KS ci ratio: 1.894669e-01	ci left: 1.282971e-04	ci right 1.554581e-04	k: 427	n:3020000
CHEK2   3020000 perm   3930 sec   (768 perm/sec)   p_kst 1.413907e-04   p_cons 5.871450e-01   p_joint 5.920530e-04

Joint ci ratio: 9.249646e-02	ci left: 5.650028e-04	ci right 6.201173e-04	k: 1794	n:3030000
Cons ci ratio: 1.888380e-03	ci left: 5.865919e-01	ci right 5.877010e-01	k: 1779054	n:3030000
KS ci ratio: 1.888063e-01	ci left: 1.288169e-04	ci right 1.559819e-04	k: 430	n:3030000
CHEK2   3030000 perm   3955 sec   (766 perm/sec)   p_kst 1.419142e-04   p_cons 5.871465e-01   p_joint 5.920792e-04

Joint ci ratio: 9.234225e-02	ci left: 5.650723e-04	ci right 6.200967e-04	k: 1800	n:3040000
Cons ci ratio: 1.885221e-03	ci left: 5.866058e-01	ci right 5.877131e-01	k: 1784965	n:3040000
KS ci ratio: 1.888063e-01	ci left: 1.283931e-04	ci right 1.554689e-04	k: 430	n:3040000
CHEK2   3040000 perm   3979 sec   (764 perm/sec)   p_kst 1.414474e-04   p_cons 5.871595e-01   p_joint 5.921053e-04

Joint ci ratio: 9.226548e-02	ci left: 5.641805e-04	ci right 6.190699e-04	k: 1803	n:3050000
Cons ci ratio: 1.882112e-03	ci left: 5.866108e-01	ci right 5.877162e-01	k: 1790849	n:3050000
KS ci ratio: 1.888064e-01	ci left: 1.279722e-04	ci right 1.549591e-04	k: 430	n:3050000
CHEK2   3050000 perm   4003 sec   (762 perm/sec)   p_kst 1.409836e-04   p_cons 5.871636e-01   p_joint 5.911475e-04

Joint ci ratio: 9.211243e-02	ci left: 5.642524e-04	ci right 6.190528e-04	k: 1809	n:3060000
Cons ci ratio: 1.878994e-03	ci left: 5.866220e-01	ci right 5.877256e-01	k: 1796752	n:3060000
KS ci ratio: 1.883698e-01	ci left: 1.281767e-04	ci right 1.551371e-04	k: 432	n:3060000
CHEK2   3060000 perm   4027 sec   (760 perm/sec)   p_kst 1.411765e-04   p_cons 5.871739e-01   p_joint 5.911765e-04

Joint ci ratio: 9.201084e-02	ci left: 5.636873e-04	ci right 6.183693e-04	k: 1813	n:3070000
Cons ci ratio: 1.875992e-03	ci left: 5.866073e-01	ci right 5.877091e-01	k: 1802576	n:3070000
KS ci ratio: 1.883699e-01	ci left: 1.277592e-04	ci right 1.546318e-04	k: 432	n:3070000
CHEK2   3070000 perm   4051 sec   (758 perm/sec)   p_kst 1.407166e-04   p_cons 5.871583e-01   p_joint 5.905537e-04

Joint ci ratio: 1.076269e-01	ci left: 4.073449e-04	ci right 4.539923e-04	k: 1325	n:3080000
Cons ci ratio: 1.928869e-03	ci left: 5.722720e-01	ci right 5.733772e-01	k: 1764300	n:3080000
KS ci ratio: 1.883699e-01	ci left: 1.273444e-04	ci right 1.541298e-04	k: 432	n:3080000
CHEK2   3080000 perm   4076 sec   (756 perm/sec)   p_kst 1.402597e-04   p_cons 5.728247e-01   p_joint 4.301948e-04

Joint ci ratio: 1.074245e-01	ci left: 4.076012e-04	ci right 4.541847e-04	k: 1330	n:3090000
Cons ci ratio: 1.925849e-03	ci left: 5.722466e-01	ci right 5.733500e-01	k: 1769947	n:3090000
KS ci ratio: 1.877207e-01	ci left: 1.278574e-04	ci right 1.546475e-04	k: 435	n:3090000
CHEK2   3090000 perm   4100 sec   (754 perm/sec)   p_kst 1.407767e-04   p_cons 5.727984e-01   p_joint 4.304207e-04

Joint ci ratio: 1.072233e-01	ci left: 4.078560e-04	ci right 4.543758e-04	k: 1335	n:3100000
Cons ci ratio: 1.922736e-03	ci left: 5.722485e-01	ci right 5.733501e-01	k: 1775678	n:3100000
KS ci ratio: 1.875058e-01	ci left: 1.277524e-04	ci right 1.544863e-04	k: 436	n:3100000
CHEK2   3100000 perm   4125 sec   (752 perm/sec)   p_kst 1.406452e-04   p_cons 5.727994e-01   p_joint 4.306452e-04

Joint ci ratio: 1.070631e-01	ci left: 4.077963e-04	ci right 4.542354e-04	k: 1339	n:3110000
Cons ci ratio: 1.919596e-03	ci left: 5.722613e-01	ci right 5.733611e-01	k: 1781443	n:3110000
KS ci ratio: 1.875058e-01	ci left: 1.273416e-04	ci right 1.539896e-04	k: 436	n:3110000
CHEK2   3110000 perm   4150 sec   (749 perm/sec)   p_kst 1.401929e-04   p_cons 5.728113e-01   p_joint 4.305466e-04

Joint ci ratio: 1.068242e-01	ci left: 4.083609e-04	ci right 4.547540e-04	k: 1345	n:3120000
Cons ci ratio: 1.916544e-03	ci left: 5.722554e-01	ci right 5.733535e-01	k: 1787150	n:3120000
KS ci ratio: 1.870782e-01	ci left: 1.275445e-04	ci right 1.541671e-04	k: 438	n:3120000
CHEK2   3120000 perm   4174 sec   (747 perm/sec)   p_kst 1.403846e-04   p_cons 5.728045e-01   p_joint 4.310897e-04

Joint ci ratio: 1.067054e-01	ci left: 4.079891e-04	ci right 4.542852e-04	k: 1348	n:3130000
Cons ci ratio: 1.913500e-03	ci left: 5.722511e-01	ci right 5.733475e-01	k: 1792862	n:3130000
KS ci ratio: 1.866535e-01	ci left: 1.277461e-04	ci right 1.543434e-04	k: 440	n:3130000
CHEK2   3130000 perm   4199 sec   (745 perm/sec)   p_kst 1.405751e-04   p_cons 5.727994e-01   p_joint 4.306709e-04

Joint ci ratio: 1.064689e-01	ci left: 4.085496e-04	ci right 4.548002e-04	k: 1354	n:3140000
Cons ci ratio: 1.910394e-03	ci left: 5.722663e-01	ci right 5.733609e-01	k: 1798635	n:3140000
KS ci ratio: 1.862317e-01	ci left: 1.279464e-04	ci right 1.545185e-04	k: 442	n:3140000
CHEK2   3140000 perm   4224 sec   (743 perm/sec)   p_kst 1.407643e-04   p_cons 5.728137e-01   p_joint 4.312102e-04

Joint ci ratio: 1.063512e-01	ci left: 4.081797e-04	ci right 4.543341e-04	k: 1357	n:3150000
Cons ci ratio: 1.907411e-03	ci left: 5.722541e-01	ci right 5.733470e-01	k: 1804322	n:3150000
KS ci ratio: 1.858127e-01	ci left: 1.281456e-04	ci right 1.546924e-04	k: 444	n:3150000
CHEK2   3150000 perm   4249 sec   (741 perm/sec)   p_kst 1.409524e-04   p_cons 5.728006e-01   p_joint 4.307937e-04

Joint ci ratio: 1.062340e-01	ci left: 4.078121e-04	ci right 4.538709e-04	k: 1360	n:3160000
Cons ci ratio: 1.904267e-03	ci left: 5.722867e-01	ci right 5.733778e-01	k: 1810150	n:3160000
KS ci ratio: 1.858127e-01	ci left: 1.277401e-04	ci right 1.542028e-04	k: 444	n:3160000
CHEK2   3160000 perm   4273 sec   (739 perm/sec)   p_kst 1.405063e-04   p_cons 5.728323e-01   p_joint 4.303797e-04

Joint ci ratio: 1.061950e-01	ci left: 4.068327e-04	ci right 4.527630e-04	k: 1361	n:3170000
Cons ci ratio: 1.901222e-03	ci left: 5.722975e-01	ci right 5.733869e-01	k: 1815910	n:3170000
KS ci ratio: 1.858127e-01	ci left: 1.273371e-04	ci right 1.537164e-04	k: 444	n:3170000
CHEK2   3170000 perm   4297 sec   (738 perm/sec)   p_kst 1.400631e-04   p_cons 5.728423e-01   p_joint 4.293375e-04

Joint ci ratio: 1.061172e-01	ci left: 4.061656e-04	ci right 4.519848e-04	k: 1363	n:3180000
Cons ci ratio: 1.898257e-03	ci left: 5.722916e-01	ci right 5.733793e-01	k: 1821617	n:3180000
KS ci ratio: 1.858128e-01	ci left: 1.269367e-04	ci right 1.532330e-04	k: 444	n:3180000
CHEK2   3180000 perm   4322 sec   (736 perm/sec)   p_kst 1.396226e-04   p_cons 5.728355e-01   p_joint 4.286164e-04

Joint ci ratio: 1.059232e-01	ci left: 4.064182e-04	ci right 4.521769e-04	k: 1368	n:3190000
Cons ci ratio: 1.895208e-03	ci left: 5.723109e-01	ci right 5.733968e-01	k: 1827404	n:3190000
KS ci ratio: 1.853966e-01	ci left: 1.271366e-04	ci right 1.534087e-04	k: 446	n:3190000
CHEK2   3190000 perm   4347 sec   (734 perm/sec)   p_kst 1.398119e-04   p_cons 5.728539e-01   p_joint 4.288401e-04

Joint ci ratio: 1.058073e-01	ci left: 4.060608e-04	ci right 4.517262e-04	k: 1371	n:3200000
Cons ci ratio: 1.892200e-03	ci left: 5.723231e-01	ci right 5.734074e-01	k: 1833169	n:3200000
KS ci ratio: 1.851896e-01	ci left: 1.270373e-04	ci right 1.532563e-04	k: 447	n:3200000
CHEK2   3200000 perm   4372 sec   (732 perm/sec)   p_kst 1.396875e-04   p_cons 5.728653e-01   p_joint 4.284375e-04

Joint ci ratio: 1.026029e-01	ci left: 4.311927e-04	ci right 4.781273e-04	k: 1458	n:3210000
Cons ci ratio: 1.889249e-03	ci left: 5.723244e-01	ci right 5.734070e-01	k: 1838899	n:3210000
KS ci ratio: 1.849833e-01	ci left: 1.269386e-04	ci right 1.531048e-04	k: 448	n:3210000
CHEK2   3210000 perm   4397 sec   (730 perm/sec)   p_kst 1.395639e-04   p_cons 5.728657e-01   p_joint 4.542056e-04

Joint ci ratio: 1.024625e-01	ci left: 4.310640e-04	ci right 4.779165e-04	k: 1462	n:3220000
Cons ci ratio: 1.886277e-03	ci left: 5.723346e-01	ci right 5.734155e-01	k: 1844658	n:3220000
KS ci ratio: 1.849833e-01	ci left: 1.265444e-04	ci right 1.526293e-04	k: 448	n:3220000
CHEK2   3220000 perm   4422 sec   (728 perm/sec)   p_kst 1.391304e-04   p_cons 5.728752e-01   p_joint 4.540373e-04

Joint ci ratio: 1.022879e-01	ci left: 4.312377e-04	ci right 4.780245e-04	k: 1467	n:3230000
Cons ci ratio: 1.883421e-03	ci left: 5.723182e-01	ci right 5.733974e-01	k: 1850331	n:3230000
KS ci ratio: 1.849834e-01	ci left: 1.261526e-04	ci right 1.521568e-04	k: 448	n:3230000
CHEK2   3230000 perm   4448 sec   (726 perm/sec)   p_kst 1.386997e-04   p_cons 5.728579e-01   p_joint 4.541796e-04

Joint ci ratio: 1.020795e-01	ci left: 4.317113e-04	ci right 4.784483e-04	k: 1473	n:3240000
Cons ci ratio: 1.880470e-03	ci left: 5.723300e-01	ci right 5.734075e-01	k: 1856095	n:3240000
KS ci ratio: 1.849834e-01	ci left: 1.257633e-04	ci right 1.516872e-04	k: 448	n:3240000
CHEK2   3240000 perm   4473 sec   (724 perm/sec)   p_kst 1.382716e-04   p_cons 5.728688e-01   p_joint 4.546296e-04

Joint ci ratio: 1.019758e-01	ci left: 4.312825e-04	ci right 4.779228e-04	k: 1476	n:3250000
Cons ci ratio: 1.877484e-03	ci left: 5.723546e-01	ci right 5.734305e-01	k: 1861901	n:3250000
KS ci ratio: 1.849834e-01	ci left: 1.253763e-04	ci right 1.512205e-04	k: 448	n:3250000
CHEK2   3250000 perm   4498 sec   (722 perm/sec)   p_kst 1.378462e-04   p_cons 5.728926e-01   p_joint 4.541538e-04

Joint ci ratio: 1.018724e-01	ci left: 4.308563e-04	ci right 4.774005e-04	k: 1479	n:3260000
Cons ci ratio: 1.874696e-03	ci left: 5.723309e-01	ci right 5.734052e-01	k: 1867550	n:3260000
KS ci ratio: 1.847778e-01	ci left: 1.252843e-04	ci right 1.510775e-04	k: 449	n:3260000
CHEK2   3260000 perm   4524 sec   (721 perm/sec)   p_kst 1.377301e-04   p_cons 5.728681e-01   p_joint 4.536810e-04

Joint ci ratio: 1.016665e-01	ci left: 4.313269e-04	ci right 4.778221e-04	k: 1485	n:3270000
Cons ci ratio: 1.871824e-03	ci left: 5.723324e-01	ci right 5.734050e-01	k: 1873281	n:3270000
KS ci ratio: 1.845728e-01	ci left: 1.251928e-04	ci right 1.509354e-04	k: 450	n:3270000
CHEK2   3270000 perm   4549 sec   (719 perm/sec)   p_kst 1.376147e-04   p_cons 5.728688e-01   p_joint 4.541284e-04

Joint ci ratio: 1.015641e-01	ci left: 4.309032e-04	ci right 4.773032e-04	k: 1488	n:3280000
Cons ci ratio: 1.868986e-03	ci left: 5.723288e-01	ci right 5.733997e-01	k: 1878995	n:3280000
KS ci ratio: 1.845729e-01	ci left: 1.248111e-04	ci right 1.504753e-04	k: 450	n:3280000
CHEK2   3280000 perm   4575 sec   (717 perm/sec)   p_kst 1.371951e-04   p_cons 5.728643e-01   p_joint 4.536585e-04

Joint ci ratio: 1.014279e-01	ci left: 4.307784e-04	ci right 4.770991e-04	k: 1492	n:3290000
Cons ci ratio: 1.866211e-03	ci left: 5.723118e-01	ci right 5.733811e-01	k: 1884665	n:3290000
KS ci ratio: 1.843686e-01	ci left: 1.247217e-04	ci right 1.503359e-04	k: 451	n:3290000
CHEK2   3290000 perm   4600 sec   (715 perm/sec)   p_kst 1.370821e-04   p_cons 5.728465e-01   p_joint 4.534954e-04

Joint ci ratio: 1.013262e-01	ci left: 4.303591e-04	ci right 4.765854e-04	k: 1495	n:3300000
Cons ci ratio: 1.863369e-03	ci left: 5.723158e-01	ci right 5.733835e-01	k: 1890404	n:3300000
KS ci ratio: 1.839620e-01	ci left: 1.249218e-04	ci right 1.505143e-04	k: 453	n:3300000
CHEK2   3300000 perm   4626 sec   (713 perm/sec)   p_kst 1.372727e-04   p_cons 5.728497e-01   p_joint 4.530303e-04

Joint ci ratio: 1.011910e-01	ci left: 4.302368e-04	ci right 4.763847e-04	k: 1499	n:3310000
Cons ci ratio: 1.860638e-03	ci left: 5.722941e-01	ci right 5.733602e-01	k: 1896058	n:3310000
KS ci ratio: 1.837598e-01	ci left: 1.248326e-04	ci right 1.503756e-04	k: 454	n:3310000
CHEK2   3310000 perm   4652 sec   (712 perm/sec)   p_kst 1.371601e-04   p_cons 5.728272e-01   p_joint 4.528701e-04

Joint ci ratio: 1.035669e-01	ci left: 4.089831e-04	ci right 4.539439e-04	k: 1431	n:3320000
Cons ci ratio: 1.857858e-03	ci left: 5.722885e-01	ci right 5.733530e-01	k: 1901765	n:3320000
KS ci ratio: 1.835582e-01	ci left: 1.247440e-04	ci right 1.502377e-04	k: 455	n:3320000
CHEK2   3320000 perm   4678 sec   (710 perm/sec)   p_kst 1.370482e-04   p_cons 5.728208e-01   p_joint 4.310241e-04

Joint ci ratio: 1.033865e-01	ci left: 4.092175e-04	ci right 4.541211e-04	k: 1436	n:3330000
Cons ci ratio: 1.855151e-03	ci left: 5.722670e-01	ci right 5.733299e-01	k: 1907419	n:3330000
KS ci ratio: 1.835582e-01	ci left: 1.243694e-04	ci right 1.497865e-04	k: 455	n:3330000
CHEK2   3330000 perm   4704 sec   (708 perm/sec)   p_kst 1.366366e-04   p_cons 5.727985e-01   p_joint 4.312312e-04

Joint ci ratio: 1.033147e-01	ci left: 4.085757e-04	ci right 4.533757e-04	k: 1438	n:3340000
Cons ci ratio: 1.852343e-03	ci left: 5.722753e-01	ci right 5.733366e-01	k: 1913172	n:3340000
KS ci ratio: 1.835583e-01	ci left: 1.239970e-04	ci right 1.493380e-04	k: 455	n:3340000
CHEK2   3340000 perm   4730 sec   (706 perm/sec)   p_kst 1.362275e-04   p_cons 5.728060e-01   p_joint 4.305389e-04

Joint ci ratio: 1.031356e-01	ci left: 4.088100e-04	ci right 4.535534e-04	k: 1443	n:3350000
Cons ci ratio: 1.849544e-03	ci left: 5.722847e-01	ci right 5.733444e-01	k: 1918929	n:3350000
KS ci ratio: 1.831570e-01	ci left: 1.241965e-04	ci right 1.495166e-04	k: 457	n:3350000
CHEK2   3350000 perm   4757 sec   (704 perm/sec)   p_kst 1.364179e-04   p_cons 5.728146e-01   p_joint 4.307463e-04

Joint ci ratio: 1.029931e-01	ci left: 4.087531e-04	ci right 4.534247e-04	k: 1447	n:3360000
Cons ci ratio: 1.846854e-03	ci left: 5.722685e-01	ci right 5.733266e-01	k: 1924600	n:3360000
KS ci ratio: 1.831571e-01	ci left: 1.238269e-04	ci right 1.490717e-04	k: 457	n:3360000
CHEK2   3360000 perm   4784 sec   (702 perm/sec)   p_kst 1.360119e-04   p_cons 5.727976e-01   p_joint 4.306548e-04

Joint ci ratio: 1.028511e-01	ci left: 4.086966e-04	ci right 4.532967e-04	k: 1451	n:3370000
Cons ci ratio: 1.844096e-03	ci left: 5.722734e-01	ci right 5.733300e-01	k: 1930342	n:3370000
KS ci ratio: 1.829574e-01	ci left: 1.237426e-04	ci right 1.489396e-04	k: 458	n:3370000
CHEK2   3370000 perm   4811 sec   (701 perm/sec)   p_kst 1.359050e-04   p_cons 5.728018e-01   p_joint 4.305638e-04

Joint ci ratio: 1.027451e-01	ci left: 4.083522e-04	ci right 4.528660e-04	k: 1454	n:3380000
Cons ci ratio: 1.841465e-03	ci left: 5.722479e-01	ci right 5.733029e-01	k: 1935981	n:3380000
KS ci ratio: 1.827585e-01	ci left: 1.236588e-04	ci right 1.488084e-04	k: 459	n:3380000
CHEK2   3380000 perm   4837 sec   (699 perm/sec)   p_kst 1.357988e-04   p_cons 5.727754e-01   p_joint 4.301775e-04

Joint ci ratio: 1.026746e-01	ci left: 4.077224e-04	ci right 4.521352e-04	k: 1456	n:3390000
Cons ci ratio: 1.838770e-03	ci left: 5.722425e-01	ci right 5.732960e-01	k: 1941688	n:3390000
KS ci ratio: 1.825602e-01	ci left: 1.235755e-04	ci right 1.486779e-04	k: 460	n:3390000
CHEK2   3390000 perm   4864 sec   (697 perm/sec)   p_kst 1.356932e-04   p_cons 5.727693e-01   p_joint 4.294985e-04

Joint ci ratio: 1.026042e-01	ci left: 4.070964e-04	ci right 4.514087e-04	k: 1458	n:3400000
Cons ci ratio: 1.836122e-03	ci left: 5.722278e-01	ci right 5.732797e-01	k: 1947363	n:3400000
KS ci ratio: 1.825602e-01	ci left: 1.232120e-04	ci right 1.482406e-04	k: 460	n:3400000
CHEK2   3400000 perm   4890 sec   (695 perm/sec)   p_kst 1.352941e-04   p_cons 5.727538e-01   p_joint 4.288235e-04

Joint ci ratio: 1.024989e-01	ci left: 4.067597e-04	ci right 4.509873e-04	k: 1461	n:3410000
Cons ci ratio: 1.833448e-03	ci left: 5.722231e-01	ci right 5.732735e-01	k: 1953072	n:3410000
KS ci ratio: 1.821655e-01	ci left: 1.234105e-04	ci right 1.484191e-04	k: 462	n:3410000
CHEK2   3410000 perm   4917 sec   (693 perm/sec)   p_kst 1.354839e-04   p_cons 5.727484e-01   p_joint 4.284457e-04

Joint ci ratio: 1.022892e-01	ci left: 4.072798e-04	ci right 4.514679e-04	k: 1467	n:3420000
Cons ci ratio: 1.830704e-03	ci left: 5.722404e-01	ci right 5.732893e-01	k: 1958856	n:3420000
KS ci ratio: 1.817733e-01	ci left: 1.236078e-04	ci right 1.485965e-04	k: 464	n:3420000
CHEK2   3420000 perm   4944 sec   (692 perm/sec)   p_kst 1.356725e-04   p_cons 5.727649e-01   p_joint 4.289474e-04

Joint ci ratio: 1.021501e-01	ci left: 4.072288e-04	ci right 4.513477e-04	k: 1471	n:3430000
Cons ci ratio: 1.828037e-03	ci left: 5.722401e-01	ci right 5.732874e-01	k: 1964580	n:3430000
KS ci ratio: 1.815781e-01	ci left: 1.235257e-04	ci right 1.484681e-04	k: 465	n:3430000
CHEK2   3430000 perm   4971 sec   (690 perm/sec)   p_kst 1.355685e-04   p_cons 5.727638e-01   p_joint 4.288630e-04

Joint ci ratio: 1.020808e-01	ci left: 4.066115e-04	ci right 4.506318e-04	k: 1473	n:3440000
Cons ci ratio: 1.825306e-03	ci left: 5.722602e-01	ci right 5.733060e-01	k: 1970374	n:3440000
KS ci ratio: 1.815782e-01	ci left: 1.231666e-04	ci right 1.480365e-04	k: 465	n:3440000
CHEK2   3440000 perm   4998 sec   (688 perm/sec)   p_kst 1.351744e-04   p_cons 5.727831e-01   p_joint 4.281977e-04

Joint ci ratio: 1.019771e-01	ci left: 4.062803e-04	ci right 4.502174e-04	k: 1476	n:3450000
Cons ci ratio: 1.822684e-03	ci left: 5.722543e-01	ci right 5.732986e-01	k: 1976079	n:3450000
KS ci ratio: 1.813837e-01	ci left: 1.230863e-04	ci right 1.479104e-04	k: 466	n:3450000
CHEK2   3450000 perm   5024 sec   (687 perm/sec)   p_kst 1.350725e-04   p_cons 5.727765e-01   p_joint 4.278261e-04

Joint ci ratio: 1.018049e-01	ci left: 4.065144e-04	ci right 4.503981e-04	k: 1481	n:3460000
Cons ci ratio: 1.820124e-03	ci left: 5.722346e-01	ci right 5.732774e-01	k: 1981736	n:3460000
KS ci ratio: 1.813837e-01	ci left: 1.227305e-04	ci right 1.474829e-04	k: 466	n:3460000
CHEK2   3460000 perm   5051 sec   (685 perm/sec)   p_kst 1.346821e-04   p_cons 5.727561e-01   p_joint 4.280347e-04

Joint ci ratio: 1.016336e-01	ci left: 4.067471e-04	ci right 4.505777e-04	k: 1486	n:3470000
Cons ci ratio: 1.817479e-03	ci left: 5.722410e-01	ci right 5.732822e-01	k: 1987483	n:3470000
KS ci ratio: 1.811898e-01	ci left: 1.226519e-04	ci right 1.473592e-04	k: 467	n:3470000
CHEK2   3470000 perm   5077 sec   (683 perm/sec)   p_kst 1.345821e-04   p_cons 5.727617e-01   p_joint 4.282421e-04

Joint ci ratio: 1.015654e-01	ci left: 4.061384e-04	ci right 4.498723e-04	k: 1488	n:3480000
Cons ci ratio: 1.814852e-03	ci left: 5.722453e-01	ci right 5.732850e-01	k: 1993223	n:3480000
KS ci ratio: 1.808039e-01	ci left: 1.228482e-04	ci right 1.475364e-04	k: 469	n:3480000
CHEK2   3480000 perm   5105 sec   (682 perm/sec)   p_kst 1.347701e-04   p_cons 5.727652e-01   p_joint 4.275862e-04

Joint ci ratio: 1.015313e-01	ci left: 4.052539e-04	ci right 4.488770e-04	k: 1489	n:3490000
Cons ci ratio: 1.812268e-03	ci left: 5.722413e-01	ci right 5.732795e-01	k: 1998934	n:3490000
KS ci ratio: 1.808039e-01	ci left: 1.224962e-04	ci right 1.471137e-04	k: 469	n:3490000
CHEK2   3490000 perm   5132 sec   (680 perm/sec)   p_kst 1.343840e-04   p_cons 5.727605e-01   p_joint 4.266476e-04

Joint ci ratio: 1.013275e-01	ci left: 4.057669e-04	ci right 4.493523e-04	k: 1495	n:3500000
Cons ci ratio: 1.809516e-03	ci left: 5.722856e-01	ci right 5.733223e-01	k: 2004814	n:3500000
KS ci ratio: 1.802296e-01	ci left: 1.229646e-04	ci right 1.475892e-04	k: 472	n:3500000
CHEK2   3500000 perm   5159 sec   (678 perm/sec)   p_kst 1.348571e-04   p_cons 5.728040e-01   p_joint 4.271429e-04

Joint ci ratio: 1.011586e-01	ci left: 4.059993e-04	ci right 4.495326e-04	k: 1500	n:3510000
Cons ci ratio: 1.806951e-03	ci left: 5.722823e-01	ci right 5.733176e-01	k: 2010528	n:3510000
KS ci ratio: 1.800394e-01	ci left: 1.228863e-04	ci right 1.474665e-04	k: 473	n:3510000
CHEK2   3510000 perm   5186 sec   (677 perm/sec)   p_kst 1.347578e-04   p_cons 5.728000e-01   p_joint 4.273504e-04

Joint ci ratio: 1.010913e-01	ci left: 4.053997e-04	ci right 4.488381e-04	k: 1502	n:3520000
Cons ci ratio: 1.804340e-03	ci left: 5.722947e-01	ci right 5.733285e-01	k: 2016297	n:3520000
KS ci ratio: 1.798498e-01	ci left: 1.228085e-04	ci right 1.473444e-04	k: 474	n:3520000
CHEK2   3520000 perm   5213 sec   (675 perm/sec)   p_kst 1.346591e-04   p_cons 5.728116e-01   p_joint 4.267045e-04

Joint ci ratio: 1.009571e-01	ci left: 4.053558e-04	ci right 4.487284e-04	k: 1506	n:3530000
Cons ci ratio: 1.801738e-03	ci left: 5.723076e-01	ci right 5.733399e-01	k: 2022068	n:3530000
KS ci ratio: 1.798498e-01	ci left: 1.224606e-04	ci right 1.469270e-04	k: 474	n:3530000
CHEK2   3530000 perm   5242 sec   (673 perm/sec)   p_kst 1.342776e-04   p_cons 5.728238e-01   p_joint 4.266289e-04

Joint ci ratio: 1.008567e-01	ci left: 4.050367e-04	ci right 4.483296e-04	k: 1509	n:3540000
Cons ci ratio: 1.799179e-03	ci left: 5.723116e-01	ci right 5.733425e-01	k: 2027808	n:3540000
KS ci ratio: 1.798498e-01	ci left: 1.221147e-04	ci right 1.465119e-04	k: 474	n:3540000
CHEK2   3540000 perm   5270 sec   (672 perm/sec)   p_kst 1.338983e-04   p_cons 5.728271e-01   p_joint 4.262712e-04

Joint ci ratio: 1.006902e-01	ci left: 4.052688e-04	ci right 4.485107e-04	k: 1514	n:3550000
Cons ci ratio: 1.796634e-03	ci left: 5.723148e-01	ci right 5.733442e-01	k: 2033545	n:3550000
KS ci ratio: 1.794724e-01	ci left: 1.223087e-04	ci right 1.466879e-04	k: 476	n:3550000
CHEK2   3550000 perm   5298 sec   (670 perm/sec)   p_kst 1.340845e-04   p_cons 5.728296e-01   p_joint 4.264789e-04

Joint ci ratio: 1.006238e-01	ci left: 4.046780e-04	ci right 4.478267e-04	k: 1516	n:3560000
Cons ci ratio: 1.794108e-03	ci left: 5.723157e-01	ci right 5.733437e-01	k: 2039274	n:3560000
KS ci ratio: 1.794724e-01	ci left: 1.219652e-04	ci right 1.462759e-04	k: 476	n:3560000
CHEK2   3560000 perm   5326 sec   (668 perm/sec)   p_kst 1.337079e-04   p_cons 5.728298e-01   p_joint 4.258427e-04

Joint ci ratio: 1.005245e-01	ci left: 4.043637e-04	ci right 4.474338e-04	k: 1519	n:3570000
Cons ci ratio: 1.791545e-03	ci left: 5.723298e-01	ci right 5.733563e-01	k: 2045050	n:3570000
KS ci ratio: 1.790973e-01	ci left: 1.221586e-04	ci right 1.464515e-04	k: 478	n:3570000
CHEK2   3570000 perm   5354 sec   (667 perm/sec)   p_kst 1.338936e-04   p_cons 5.728431e-01   p_joint 4.254902e-04

Joint ci ratio: 1.003925e-01	ci left: 4.043234e-04	ci right 4.473294e-04	k: 1523	n:3580000
Cons ci ratio: 1.789026e-03	ci left: 5.723346e-01	ci right 5.733597e-01	k: 2050793	n:3580000
KS ci ratio: 1.790974e-01	ci left: 1.218174e-04	ci right 1.460424e-04	k: 478	n:3580000
CHEK2   3580000 perm   5382 sec   (665 perm/sec)   p_kst 1.335196e-04   p_cons 5.728472e-01   p_joint 4.254190e-04

Joint ci ratio: 1.003267e-01	ci left: 4.037403e-04	ci right 4.466544e-04	k: 1525	n:3590000
Cons ci ratio: 1.786474e-03	ci left: 5.723513e-01	ci right 5.733750e-01	k: 2056579	n:3590000
KS ci ratio: 1.790974e-01	ci left: 1.214781e-04	ci right 1.456356e-04	k: 478	n:3590000
CHEK2   3590000 perm   5410 sec   (664 perm/sec)   p_kst 1.331476e-04   p_cons 5.728632e-01   p_joint 4.247911e-04

Joint ci ratio: 1.002282e-01	ci left: 4.034312e-04	ci right 4.462679e-04	k: 1528	n:3600000
Cons ci ratio: 1.784067e-03	ci left: 5.723313e-01	ci right 5.733536e-01	k: 2062233	n:3600000
KS ci ratio: 1.789107e-01	ci left: 1.214060e-04	ci right 1.455213e-04	k: 479	n:3600000
CHEK2   3600000 perm   5438 sec   (662 perm/sec)   p_kst 1.330556e-04   p_cons 5.728425e-01   p_joint 4.244444e-04

Joint ci ratio: 1.004916e-01	ci left: 4.001532e-04	ci right 4.427601e-04	k: 1520	n:3610000
Cons ci ratio: 1.781654e-03	ci left: 5.723156e-01	ci right 5.733364e-01	k: 2067902	n:3610000
KS ci ratio: 1.789108e-01	ci left: 1.210697e-04	ci right 1.451182e-04	k: 479	n:3610000
CHEK2   3610000 perm   5467 sec   (660 perm/sec)   p_kst 1.326870e-04   p_cons 5.728260e-01   p_joint 4.210526e-04

Joint ci ratio: 1.002940e-01	ci left: 4.006636e-04	ci right 4.432361e-04	k: 1526	n:3620000
Cons ci ratio: 1.779258e-03	ci left: 5.722980e-01	ci right 5.733174e-01	k: 2073564	n:3620000
KS ci ratio: 1.787247e-01	ci left: 1.209991e-04	ci right 1.450059e-04	k: 480	n:3620000
CHEK2   3620000 perm   5495 sec   (659 perm/sec)   p_kst 1.325967e-04   p_cons 5.728077e-01   p_joint 4.215470e-04

Joint ci ratio: 1.001629e-01	ci left: 4.006342e-04	ci right 4.431446e-04	k: 1530	n:3630000
Cons ci ratio: 1.776838e-03	ci left: 5.722896e-01	ci right 5.733076e-01	k: 2079259	n:3630000
KS ci ratio: 1.787247e-01	ci left: 1.206657e-04	ci right 1.446064e-04	k: 480	n:3630000
CHEK2   3630000 perm   5524 sec   (657 perm/sec)   p_kst 1.322314e-04   p_cons 5.727986e-01   p_joint 4.214876e-04

Joint ci ratio: 1.000649e-01	ci left: 4.003371e-04	ci right 4.427719e-04	k: 1533	n:3640000
Cons ci ratio: 1.774379e-03	ci left: 5.722949e-01	ci right 5.733116e-01	k: 2085004	n:3640000
KS ci ratio: 1.785393e-01	ci left: 1.205967e-04	ci right 1.444961e-04	k: 481	n:3640000
CHEK2   3640000 perm   5552 sec   (656 perm/sec)   p_kst 1.321429e-04   p_cons 5.728033e-01   p_joint 4.211538e-04

Joint ci ratio: 1.005249e-01	ci left: 3.955008e-04	ci right 4.376271e-04	k: 1519	n:3650000
Cons ci ratio: 1.771887e-03	ci left: 5.723121e-01	ci right 5.733273e-01	k: 2090792	n:3650000
KS ci ratio: 1.785393e-01	ci left: 1.202663e-04	ci right 1.441003e-04	k: 481	n:3650000
CHEK2   3650000 perm   5580 sec   (654 perm/sec)   p_kst 1.317808e-04   p_cons 5.728197e-01   p_joint 4.161644e-04

Joint ci ratio: 1.004259e-01	ci left: 3.952193e-04	ci right 4.372717e-04	k: 1522	n:3660000
Cons ci ratio: 1.769451e-03	ci left: 5.723165e-01	ci right 5.733304e-01	k: 2096534	n:3660000
KS ci ratio: 1.781700e-01	ci left: 1.204597e-04	ci right 1.442774e-04	k: 483	n:3660000
CHEK2   3660000 perm   5608 sec   (653 perm/sec)   p_kst 1.319672e-04   p_cons 5.728235e-01   p_joint 4.158470e-04

Joint ci ratio: 1.002943e-01	ci left: 3.952049e-04	ci right 4.371975e-04	k: 1526	n:3670000
Cons ci ratio: 1.766937e-03	ci left: 5.723455e-01	ci right 5.733579e-01	k: 2102366	n:3670000
KS ci ratio: 1.779862e-01	ci left: 1.203919e-04	ci right 1.441689e-04	k: 484	n:3670000
CHEK2   3670000 perm   5638 sec   (651 perm/sec)   p_kst 1.318801e-04   p_cons 5.728518e-01   p_joint 4.158038e-04

Joint ci ratio: 1.001632e-01	ci left: 3.951907e-04	ci right 4.371236e-04	k: 1530	n:3680000
Cons ci ratio: 1.764389e-03	ci left: 5.723865e-01	ci right 5.733976e-01	k: 2108243	n:3680000
KS ci ratio: 1.776204e-01	ci left: 1.205840e-04	ci right 1.443447e-04	k: 486	n:3680000
CHEK2   3680000 perm   5666 sec   (649 perm/sec)   p_kst 1.320652e-04   p_cons 5.728921e-01   p_joint 4.157609e-04

Joint ci ratio: 1.000000e-01	ci left: 3.954408e-04	ci right 4.373279e-04	k: 1535	n:3690000
Cons ci ratio: 1.761967e-03	ci left: 5.723954e-01	ci right 5.734051e-01	k: 2114002	n:3690000
KS ci ratio: 1.772568e-01	ci left: 1.207751e-04	ci right 1.445196e-04	k: 488	n:3690000
CHEK2   3690000 perm   5696 sec   (648 perm/sec)   p_kst 1.322493e-04   p_cons 5.729003e-01   p_joint 4.159892e-04

Joint ci ratio: 9.996750e-02	ci left: 3.946356e-04	ci right 4.364230e-04	k: 1536	n:3700000
Cons ci ratio: 1.759711e-03	ci left: 5.723609e-01	ci right 5.733692e-01	k: 2119601	n:3700000
KS ci ratio: 1.772568e-01	ci left: 1.204487e-04	ci right 1.441290e-04	k: 488	n:3700000
CHEK2   3700000 perm   5725 sec   (646 perm/sec)   p_kst 1.318919e-04   p_cons 5.728651e-01   p_joint 4.151351e-04

Joint ci ratio: 1.006579e-01	ci left: 3.880534e-04	ci right 4.294444e-04	k: 1515	n:3710000
Cons ci ratio: 1.757317e-03	ci left: 5.723673e-01	ci right 5.733743e-01	k: 2125351	n:3710000
KS ci ratio: 1.765362e-01	ci left: 1.211545e-04	ci right 1.448664e-04	k: 492	n:3710000
CHEK2   3710000 perm   5754 sec   (645 perm/sec)   p_kst 1.326146e-04   p_cons 5.728709e-01   p_joint 4.083558e-04

Joint ci ratio: 1.004592e-01	ci left: 3.885826e-04	ci right 4.299434e-04	k: 1521	n:3720000
Cons ci ratio: 1.754990e-03	ci left: 5.723579e-01	ci right 5.733635e-01	k: 2131042	n:3720000
KS ci ratio: 1.760014e-01	ci left: 1.215997e-04	ci right 1.453189e-04	k: 495	n:3720000
CHEK2   3720000 perm   5783 sec   (643 perm/sec)   p_kst 1.330645e-04   p_cons 5.728608e-01   p_joint 4.088710e-04

Joint ci ratio: 1.002618e-01	ci left: 3.891091e-04	ci right 4.304397e-04	k: 1527	n:3730000
Cons ci ratio: 1.752610e-03	ci left: 5.723659e-01	ci right 5.733702e-01	k: 2136798	n:3730000
KS ci ratio: 1.754715e-01	ci left: 1.220426e-04	ci right 1.457690e-04	k: 498	n:3730000
CHEK2   3730000 perm   5811 sec   (642 perm/sec)   p_kst 1.335121e-04   p_cons 5.728681e-01   p_joint 4.093834e-04

Joint ci ratio: 1.001962e-01	ci left: 3.885900e-04	ci right 4.298370e-04	k: 1529	n:3740000
Cons ci ratio: 1.750233e-03	ci left: 5.723755e-01	ci right 5.733784e-01	k: 2142560	n:3740000
KS ci ratio: 1.754716e-01	ci left: 1.217163e-04	ci right 1.453792e-04	k: 498	n:3740000
CHEK2   3740000 perm   5839 sec   (640 perm/sec)   p_kst 1.331551e-04   p_cons 5.728770e-01   p_joint 4.088235e-04

Joint ci ratio: 1.000655e-01	ci left: 3.885937e-04	ci right 4.297841e-04	k: 1533	n:3750000
Cons ci ratio: 1.747897e-03	ci left: 5.723765e-01	ci right 5.733781e-01	k: 2148290	n:3750000
KS ci ratio: 1.751210e-01	ci left: 1.219016e-04	ci right 1.455482e-04	k: 500	n:3750000
CHEK2   3750000 perm   5868 sec   (639 perm/sec)   p_kst 1.333333e-04   p_cons 5.728773e-01   p_joint 4.088000e-04

Joint ci ratio: 9.993532e-02	ci left: 3.885975e-04	ci right 4.297315e-04	k: 1537	n:3760000
Cons ci ratio: 1.745558e-03	ci left: 5.723807e-01	ci right 5.733809e-01	k: 2154032	n:3760000
KS ci ratio: 1.751210e-01	ci left: 1.215774e-04	ci right 1.451612e-04	k: 500	n:3760000
CHEK2   3760000 perm   5897 sec   (638 perm/sec)   p_kst 1.329787e-04   p_cons 5.728809e-01   p_joint 4.087766e-04

Joint ci ratio: 9.980562e-02	ci left: 3.886012e-04	ci right 4.296791e-04	k: 1541	n:3770000
Cons ci ratio: 1.743218e-03	ci left: 5.723880e-01	ci right 5.733869e-01	k: 2159786	n:3770000
KS ci ratio: 1.749465e-01	ci left: 1.215086e-04	ci right 1.450530e-04	k: 501	n:3770000
CHEK2   3770000 perm   5926 sec   (636 perm/sec)   p_kst 1.328912e-04   p_cons 5.728875e-01   p_joint 4.087533e-04

Joint ci ratio: 9.970869e-02	ci left: 3.883470e-04	ci right 4.293558e-04	k: 1544	n:3780000
Cons ci ratio: 1.740911e-03	ci left: 5.723884e-01	ci right 5.733860e-01	k: 2165514	n:3780000
KS ci ratio: 1.745990e-01	ci left: 1.216931e-04	ci right 1.452215e-04	k: 503	n:3780000
CHEK2   3780000 perm   5956 sec   (635 perm/sec)   p_kst 1.330688e-04   p_cons 5.728873e-01   p_joint 4.084656e-04

Joint ci ratio: 9.961204e-02	ci left: 3.880942e-04	ci right 4.290343e-04	k: 1547	n:3790000
Cons ci ratio: 1.738561e-03	ci left: 5.724039e-01	ci right 5.734002e-01	k: 2171299	n:3790000
KS ci ratio: 1.744261e-01	ci left: 1.216243e-04	ci right 1.451137e-04	k: 504	n:3790000
CHEK2   3790000 perm   5985 sec   (633 perm/sec)   p_kst 1.329815e-04   p_cons 5.729021e-01   p_joint 4.081794e-04

Joint ci ratio: 1.000332e-01	ci left: 3.837372e-04	ci right 4.243988e-04	k: 1534	n:3800000
Cons ci ratio: 1.736233e-03	ci left: 5.724154e-01	ci right 5.734103e-01	k: 2177069	n:3800000
KS ci ratio: 1.744261e-01	ci left: 1.213042e-04	ci right 1.447318e-04	k: 504	n:3800000
CHEK2   3800000 perm   6015 sec   (632 perm/sec)   p_kst 1.326316e-04   p_cons 5.729129e-01   p_joint 4.036842e-04

Joint ci ratio: 9.993559e-02	ci left: 3.834977e-04	ci right 4.240920e-04	k: 1537	n:3810000
Cons ci ratio: 1.734015e-03	ci left: 5.723987e-01	ci right 5.733923e-01	k: 2182732	n:3810000
KS ci ratio: 1.744261e-01	ci left: 1.209859e-04	ci right 1.443519e-04	k: 504	n:3810000
CHEK2   3810000 perm   6045 sec   (630 perm/sec)   p_kst 1.322835e-04   p_cons 5.728955e-01   p_joint 4.034121e-04

Joint ci ratio: 9.967663e-02	ci left: 3.845358e-04	ci right 4.251283e-04	k: 1545	n:3820000
Cons ci ratio: 1.731811e-03	ci left: 5.723802e-01	ci right 5.733726e-01	k: 2188388	n:3820000
KS ci ratio: 1.744262e-01	ci left: 1.206691e-04	ci right 1.439740e-04	k: 504	n:3820000
CHEK2   3820000 perm   6074 sec   (629 perm/sec)   p_kst 1.319372e-04   p_cons 5.728764e-01   p_joint 4.044503e-04

Joint ci ratio: 9.954794e-02	ci left: 3.845501e-04	ci right 4.250887e-04	k: 1549	n:3830000
Cons ci ratio: 1.729610e-03	ci left: 5.723637e-01	ci right 5.733547e-01	k: 2194051	n:3830000
KS ci ratio: 1.740818e-01	ci left: 1.208535e-04	ci right 1.441431e-04	k: 506	n:3830000
CHEK2   3830000 perm   6104 sec   (627 perm/sec)   p_kst 1.321149e-04   p_cons 5.728593e-01   p_joint 4.044386e-04

Joint ci ratio: 9.948380e-02	ci left: 3.840566e-04	ci right 4.245155e-04	k: 1551	n:3840000
Cons ci ratio: 1.727391e-03	ci left: 5.723545e-01	ci right 5.733443e-01	k: 2199742	n:3840000
KS ci ratio: 1.739103e-01	ci left: 1.207879e-04	ci right 1.440394e-04	k: 507	n:3840000
CHEK2   3840000 perm   6133 sec   (626 perm/sec)   p_kst 1.320312e-04   p_cons 5.728495e-01   p_joint 4.039063e-04

Joint ci ratio: 9.922834e-02	ci left: 3.850853e-04	ci right 4.255424e-04	k: 1559	n:3850000
Cons ci ratio: 1.725093e-03	ci left: 5.723701e-01	ci right 5.733586e-01	k: 2205528	n:3850000
KS ci ratio: 1.737394e-01	ci left: 1.207226e-04	ci right 1.439363e-04	k: 508	n:3850000
CHEK2   3850000 perm   6163 sec   (625 perm/sec)   p_kst 1.319481e-04   p_cons 5.728644e-01   p_joint 4.049351e-04

Joint ci ratio: 9.919659e-02	ci left: 3.843403e-04	ci right 4.247055e-04	k: 1560	n:3860000
Cons ci ratio: 1.722884e-03	ci left: 5.723631e-01	ci right 5.733503e-01	k: 2211227	n:3860000
KS ci ratio: 1.737395e-01	ci left: 1.204098e-04	ci right 1.435634e-04	k: 508	n:3860000
CHEK2   3860000 perm   6194 sec   (623 perm/sec)   p_kst 1.316062e-04   p_cons 5.728567e-01   p_joint 4.041451e-04

Joint ci ratio: 9.903809e-02	ci left: 3.846071e-04	ci right 4.249320e-04	k: 1565	n:3870000
Cons ci ratio: 1.720615e-03	ci left: 5.723755e-01	ci right 5.733614e-01	k: 2217001	n:3870000
KS ci ratio: 1.735691e-01	ci left: 1.203458e-04	ci right 1.434621e-04	k: 509	n:3870000
CHEK2   3870000 perm   6224 sec   (622 perm/sec)   p_kst 1.315245e-04   p_cons 5.728685e-01   p_joint 4.043928e-04

Joint ci ratio: 9.894337e-02	ci left: 3.843699e-04	ci right 4.246292e-04	k: 1568	n:3880000
Cons ci ratio: 1.718361e-03	ci left: 5.723862e-01	ci right 5.733709e-01	k: 2222769	n:3880000
KS ci ratio: 1.735691e-01	ci left: 1.200357e-04	ci right 1.430924e-04	k: 509	n:3880000
CHEK2   3880000 perm   6254 sec   (620 perm/sec)   p_kst 1.311856e-04   p_cons 5.728786e-01   p_joint 4.041237e-04

Joint ci ratio: 9.891190e-02	ci left: 3.836325e-04	ci right 4.238010e-04	k: 1569	n:3890000
Cons ci ratio: 1.716155e-03	ci left: 5.723856e-01	ci right 5.733690e-01	k: 2228493	n:3890000
KS ci ratio: 1.735691e-01	ci left: 1.197271e-04	ci right 1.427245e-04	k: 509	n:3890000
CHEK2   3890000 perm   6284 sec   (619 perm/sec)   p_kst 1.308483e-04   p_cons 5.728774e-01   p_joint 4.033419e-04

Joint ci ratio: 9.875476e-02	ci left: 3.838992e-04	ci right 4.240281e-04	k: 1574	n:3900000
Cons ci ratio: 1.713905e-03	ci left: 5.724002e-01	ci right 5.733823e-01	k: 2234276	n:3900000
KS ci ratio: 1.733992e-01	ci left: 1.196654e-04	ci right 1.426261e-04	k: 510	n:3900000
CHEK2   3900000 perm   6314 sec   (618 perm/sec)   p_kst 1.307692e-04   p_cons 5.728913e-01   p_joint 4.035897e-04

Joint ci ratio: 1.044124e-01	ci left: 3.415395e-04	ci right 3.794114e-04	k: 1408	n:3910000
Cons ci ratio: 1.711700e-03	ci left: 5.724041e-01	ci right 5.733850e-01	k: 2240018	n:3910000
KS ci ratio: 1.732298e-01	ci left: 1.196040e-04	ci right 1.425281e-04	k: 511	n:3910000
CHEK2   3910000 perm   6344 sec   (616 perm/sec)   p_kst 1.306905e-04   p_cons 5.728946e-01   p_joint 3.601023e-04

Joint ci ratio: 1.041908e-01	ci left: 3.421589e-04	ci right 3.800141e-04	k: 1414	n:3920000
Cons ci ratio: 1.709524e-03	ci left: 5.724022e-01	ci right 5.733818e-01	k: 2245737	n:3920000
KS ci ratio: 1.728924e-01	ci left: 1.197870e-04	ci right 1.426968e-04	k: 513	n:3920000
CHEK2   3920000 perm   6374 sec   (615 perm/sec)   p_kst 1.308673e-04   p_cons 5.728921e-01   p_joint 3.607143e-04

Joint ci ratio: 1.040805e-01	ci left: 3.420318e-04	ci right 3.798303e-04	k: 1417	n:3930000
Cons ci ratio: 1.707319e-03	ci left: 5.724113e-01	ci right 5.733896e-01	k: 2251499	n:3930000
KS ci ratio: 1.725570e-01	ci left: 1.199691e-04	ci right 1.428646e-04	k: 515	n:3930000
CHEK2   3930000 perm   6405 sec   (614 perm/sec)   p_kst 1.310433e-04   p_cons 5.729005e-01   p_joint 3.605598e-04

Joint ci ratio: 1.039340e-01	ci left: 3.421525e-04	ci right 3.799079e-04	k: 1421	n:3940000
Cons ci ratio: 1.705161e-03	ci left: 5.724088e-01	ci right 5.733860e-01	k: 2257216	n:3940000
KS ci ratio: 1.722236e-01	ci left: 1.201503e-04	ci right 1.430315e-04	k: 517	n:3940000
CHEK2   3940000 perm   6436 sec   (612 perm/sec)   p_kst 1.312183e-04   p_cons 5.728975e-01   p_joint 3.606599e-04

Joint ci ratio: 1.038976e-01	ci left: 3.415329e-04	ci right 3.792059e-04	k: 1422	n:3950000
Cons ci ratio: 1.703003e-03	ci left: 5.724090e-01	ci right 5.733848e-01	k: 2262943	n:3950000
KS ci ratio: 1.722236e-01	ci left: 1.198461e-04	ci right 1.426694e-04	k: 517	n:3950000
CHEK2   3950000 perm   6466 sec   (611 perm/sec)   p_kst 1.308861e-04   p_cons 5.728970e-01   p_joint 3.600000e-04

Joint ci ratio: 1.036429e-01	ci left: 3.423922e-04	ci right 3.800618e-04	k: 1429	n:3960000
Cons ci ratio: 1.700860e-03	ci left: 5.724071e-01	ci right 5.733817e-01	k: 2268662	n:3960000
KS ci ratio: 1.715624e-01	ci left: 1.205101e-04	ci right 1.433626e-04	k: 521	n:3960000
CHEK2   3960000 perm   6497 sec   (610 perm/sec)   p_kst 1.315657e-04   p_cons 5.728944e-01   p_joint 3.608586e-04

Joint ci ratio: 1.035344e-01	ci left: 3.422659e-04	ci right 3.798797e-04	k: 1432	n:3970000
Cons ci ratio: 1.698829e-03	ci left: 5.723754e-01	ci right 5.733489e-01	k: 2274263	n:3970000
KS ci ratio: 1.712347e-01	ci left: 1.206887e-04	ci right 1.435269e-04	k: 523	n:3970000
CHEK2   3970000 perm   6528 sec   (608 perm/sec)   p_kst 1.317380e-04   p_cons 5.728622e-01   p_joint 3.607053e-04

Joint ci ratio: 1.034262e-01	ci left: 3.421402e-04	ci right 3.796985e-04	k: 1435	n:3980000
Cons ci ratio: 1.696681e-03	ci left: 5.723794e-01	ci right 5.733516e-01	k: 2280005	n:3980000
KS ci ratio: 1.707466e-01	ci left: 1.211070e-04	ci right 1.439523e-04	k: 526	n:3980000
CHEK2   3980000 perm   6559 sec   (607 perm/sec)   p_kst 1.321608e-04   p_cons 5.728656e-01   p_joint 3.605528e-04

Joint ci ratio: 1.032466e-01	ci left: 3.425034e-04	ci right 3.800324e-04	k: 1440	n:3990000
Cons ci ratio: 1.694577e-03	ci left: 5.723734e-01	ci right 5.733443e-01	k: 2285707	n:3990000
KS ci ratio: 1.702626e-01	ci left: 1.215233e-04	ci right 1.443754e-04	k: 529	n:3990000
CHEK2   3990000 perm   6590 sec   (605 perm/sec)   p_kst 1.325815e-04   p_cons 5.728589e-01   p_joint 3.609023e-04

Joint ci ratio: 1.031393e-01	ci left: 3.423778e-04	ci right 3.798517e-04	k: 1443	n:4000000
Cons ci ratio: 1.692395e-03	ci left: 5.723921e-01	ci right 5.733618e-01	k: 2291508	n:4000000
KS ci ratio: 1.701022e-01	ci left: 1.214588e-04	ci right 1.442751e-04	k: 530	n:4000000
CHEK2   4000000 perm   6621 sec   (604 perm/sec)   p_kst 1.325000e-04   p_cons 5.728770e-01   p_joint 3.607500e-04

Joint ci ratio: 1.030679e-01	ci left: 3.420099e-04	ci right 3.794160e-04	k: 1445	n:4010000
Cons ci ratio: 1.690275e-03	ci left: 5.723952e-01	ci right 5.733638e-01	k: 2297247	n:4010000
KS ci ratio: 1.697827e-01	ci left: 1.216335e-04	ci right 1.444353e-04	k: 532	n:4010000
CHEK2   4010000 perm   6652 sec   (603 perm/sec)   p_kst 1.326683e-04   p_cons 5.728796e-01   p_joint 3.603491e-04

Joint ci ratio: 1.028902e-01	ci left: 3.423709e-04	ci right 3.797480e-04	k: 1450	n:4020000
Cons ci ratio: 1.688163e-03	ci left: 5.723981e-01	ci right 5.733655e-01	k: 2302985	n:4020000
KS ci ratio: 1.694651e-01	ci left: 1.218073e-04	ci right 1.445946e-04	k: 534	n:4020000
CHEK2   4020000 perm   6684 sec   (601 perm/sec)   p_kst 1.328358e-04   p_cons 5.728818e-01   p_joint 3.606965e-04

Joint ci ratio: 1.027133e-01	ci left: 3.427301e-04	ci right 3.800783e-04	k: 1455	n:4030000
Cons ci ratio: 1.686031e-03	ci left: 5.724092e-01	ci right 5.733753e-01	k: 2308756	n:4030000
KS ci ratio: 1.688350e-01	ci left: 1.224556e-04	ci right 1.452703e-04	k: 538	n:4030000
CHEK2   4030000 perm   6715 sec   (600 perm/sec)   p_kst 1.334988e-04   p_cons 5.728923e-01   p_joint 3.610422e-04

Joint ci ratio: 1.026781e-01	ci left: 3.421229e-04	ci right 3.793914e-04	k: 1456	n:4040000
Cons ci ratio: 1.683900e-03	ci left: 5.724224e-01	ci right 5.733874e-01	k: 2314536	n:4040000
KS ci ratio: 1.686786e-01	ci left: 1.223896e-04	ci right 1.451687e-04	k: 539	n:4040000
CHEK2   4040000 perm   6746 sec   (599 perm/sec)   p_kst 1.334158e-04   p_cons 5.729050e-01   p_joint 3.603960e-04

Joint ci ratio: 9.390063e-02	ci left: 4.099228e-04	ci right 4.505500e-04	k: 1741	n:4050000
Cons ci ratio: 1.681823e-03	ci left: 5.724220e-01	ci right 5.733858e-01	k: 2320261	n:4050000
KS ci ratio: 1.685227e-01	ci left: 1.223239e-04	ci right 1.450676e-04	k: 540	n:4050000
CHEK2   4050000 perm   6779 sec   (597 perm/sec)   p_kst 1.333333e-04   p_cons 5.729040e-01   p_joint 4.298765e-04

Joint ci ratio: 9.373932e-02	ci left: 4.103563e-04	ci right 4.509528e-04	k: 1747	n:4060000
Cons ci ratio: 1.679670e-03	ci left: 5.724460e-01	ci right 5.734086e-01	k: 2326085	n:4060000
KS ci ratio: 1.682120e-01	ci left: 1.224944e-04	ci right 1.452236e-04	k: 542	n:4060000
CHEK2   4060000 perm   6811 sec   (596 perm/sec)   p_kst 1.334975e-04   p_cons 5.729273e-01   p_joint 4.302956e-04

Joint ci ratio: 9.599072e-02	ci left: 3.899183e-04	ci right 4.294714e-04	k: 1666	n:4070000
Cons ci ratio: 1.677547e-03	ci left: 5.724637e-01	ci right 5.734251e-01	k: 2331884	n:4070000
KS ci ratio: 1.682121e-01	ci left: 1.221935e-04	ci right 1.448668e-04	k: 542	n:4070000
CHEK2   4070000 perm   6842 sec   (595 perm/sec)   p_kst 1.331695e-04   p_cons 5.729445e-01   p_joint 4.093366e-04

Joint ci ratio: 9.573259e-02	ci left: 3.911156e-04	ci right 4.306775e-04	k: 1675	n:4080000
Cons ci ratio: 1.675486e-03	ci left: 5.724654e-01	ci right 5.734256e-01	k: 2337618	n:4080000
KS ci ratio: 1.677493e-01	ci left: 1.225983e-04	ci right 1.452779e-04	k: 545	n:4080000
CHEK2   4080000 perm   6875 sec   (593 perm/sec)   p_kst 1.335784e-04   p_cons 5.729456e-01   p_joint 4.105392e-04

Joint ci ratio: 9.561855e-02	ci left: 3.911139e-04	ci right 4.306259e-04	k: 1679	n:4090000
Cons ci ratio: 1.673383e-03	ci left: 5.724816e-01	ci right 5.734406e-01	k: 2343411	n:4090000
KS ci ratio: 1.674429e-01	ci left: 1.227671e-04	ci right 1.454322e-04	k: 547	n:4090000
CHEK2   4090000 perm   6906 sec   (592 perm/sec)   p_kst 1.337408e-04   p_cons 5.729611e-01   p_joint 4.105134e-04

Joint ci ratio: 9.559014e-02	ci left: 3.903980e-04	ci right 4.298253e-04	k: 1680	n:4100000
Cons ci ratio: 1.671320e-03	ci left: 5.724883e-01	ci right 5.734462e-01	k: 2349166	n:4100000
KS ci ratio: 1.674429e-01	ci left: 1.224677e-04	ci right 1.450775e-04	k: 547	n:4100000
CHEK2   4100000 perm   6938 sec   (591 perm/sec)   p_kst 1.334146e-04   p_cons 5.729673e-01   p_joint 4.097561e-04

Joint ci ratio: 1.010608e-01	ci left: 3.474403e-04	ci right 3.846564e-04	k: 1503	n:4110000
Cons ci ratio: 1.669350e-03	ci left: 5.724700e-01	ci right 5.734267e-01	k: 2354818	n:4110000
KS ci ratio: 1.674429e-01	ci left: 1.221697e-04	ci right 1.447245e-04	k: 547	n:4110000
CHEK2   4110000 perm   6971 sec   (590 perm/sec)   p_kst 1.330900e-04   p_cons 5.729484e-01   p_joint 3.656934e-04

Joint ci ratio: 1.009266e-01	ci left: 3.475433e-04	ci right 3.847182e-04	k: 1507	n:4120000
Cons ci ratio: 1.667255e-03	ci left: 5.724906e-01	ci right 5.734462e-01	k: 2360630	n:4120000
KS ci ratio: 1.674429e-01	ci left: 1.218731e-04	ci right 1.443733e-04	k: 547	n:4120000
CHEK2   4120000 perm   7004 sec   (588 perm/sec)   p_kst 1.327670e-04   p_cons 5.729684e-01   p_joint 3.657767e-04

Joint ci ratio: 1.007264e-01	ci left: 3.481180e-04	ci right 3.852761e-04	k: 1513	n:4130000
Cons ci ratio: 1.665188e-03	ci left: 5.725051e-01	ci right 5.734594e-01	k: 2366417	n:4130000
KS ci ratio: 1.672904e-01	ci left: 1.218100e-04	ci right 1.442759e-04	k: 548	n:4130000
CHEK2   4130000 perm   7035 sec   (587 perm/sec)   p_kst 1.326877e-04   p_cons 5.729823e-01   p_joint 3.663438e-04

Joint ci ratio: 1.006268e-01	ci left: 3.479835e-04	ci right 3.850883e-04	k: 1516	n:4140000
Cons ci ratio: 1.663185e-03	ci left: 5.725028e-01	ci right 5.734560e-01	k: 2372135	n:4140000
KS ci ratio: 1.671382e-01	ci left: 1.217473e-04	ci right 1.441791e-04	k: 549	n:4140000
CHEK2   4140000 perm   7067 sec   (586 perm/sec)   p_kst 1.326087e-04   p_cons 5.729795e-01   p_joint 3.661836e-04

Joint ci ratio: 1.005605e-01	ci left: 3.476148e-04	ci right 3.846544e-04	k: 1518	n:4150000
Cons ci ratio: 1.661210e-03	ci left: 5.724945e-01	ci right 5.734466e-01	k: 2377828	n:4150000
KS ci ratio: 1.671383e-01	ci left: 1.214539e-04	ci right 1.438317e-04	k: 549	n:4150000
CHEK2   4150000 perm   7099 sec   (585 perm/sec)   p_kst 1.322892e-04   p_cons 5.729706e-01   p_joint 3.657831e-04

Joint ci ratio: 1.004284e-01	ci left: 3.477165e-04	ci right 3.847155e-04	k: 1522	n:4160000
Cons ci ratio: 1.659216e-03	ci left: 5.724940e-01	ci right 5.734449e-01	k: 2383553	n:4160000
KS ci ratio: 1.666843e-01	ci left: 1.218530e-04	ci right 1.442372e-04	k: 552	n:4160000
CHEK2   4160000 perm   7131 sec   (583 perm/sec)   p_kst 1.326923e-04   p_cons 5.729695e-01   p_joint 3.658654e-04

Joint ci ratio: 1.002311e-01	ci left: 3.482854e-04	ci right 3.852678e-04	k: 1528	n:4170000
Cons ci ratio: 1.657179e-03	ci left: 5.725083e-01	ci right 5.734580e-01	k: 2389340	n:4170000
KS ci ratio: 1.662339e-01	ci left: 1.222502e-04	ci right 1.446407e-04	k: 555	n:4170000
CHEK2   4170000 perm   7163 sec   (582 perm/sec)   p_kst 1.330935e-04   p_cons 5.729832e-01   p_joint 3.664269e-04

Joint ci ratio: 1.000676e-01	ci left: 3.486184e-04	ci right 3.855723e-04	k: 1533	n:4180000
Cons ci ratio: 1.655204e-03	ci left: 5.725065e-01	ci right 5.734551e-01	k: 2395060	n:4180000
KS ci ratio: 1.657872e-01	ci left: 1.226456e-04	ci right 1.450421e-04	k: 558	n:4180000
CHEK2   4180000 perm   7196 sec   (581 perm/sec)   p_kst 1.334928e-04   p_cons 5.729809e-01   p_joint 3.667464e-04

Joint ci ratio: 9.996994e-02	ci left: 3.484845e-04	ci right 3.853859e-04	k: 1536	n:4190000
Cons ci ratio: 1.653296e-03	ci left: 5.724866e-01	ci right 5.734341e-01	k: 2400704	n:4190000
KS ci ratio: 1.657873e-01	ci left: 1.223529e-04	ci right 1.446960e-04	k: 558	n:4190000
CHEK2   4190000 perm   7229 sec   (580 perm/sec)   p_kst 1.331742e-04   p_cons 5.729604e-01   p_joint 3.665871e-04

Joint ci ratio: 9.977535e-02	ci left: 3.490476e-04	ci right 3.859326e-04	k: 1542	n:4200000
Cons ci ratio: 1.651312e-03	ci left: 5.724915e-01	ci right 5.734379e-01	k: 2406452	n:4200000
KS ci ratio: 1.654915e-01	ci left: 1.225180e-04	ci right 1.448474e-04	k: 560	n:4200000
CHEK2   4200000 perm   7261 sec   (578 perm/sec)   p_kst 1.333333e-04   p_cons 5.729648e-01   p_joint 3.671429e-04

Joint ci ratio: 9.967850e-02	ci left: 3.489134e-04	ci right 3.857463e-04	k: 1545	n:4210000
Cons ci ratio: 1.649360e-03	ci left: 5.724891e-01	ci right 5.734343e-01	k: 2412169	n:4210000
KS ci ratio: 1.653442e-01	ci left: 1.224547e-04	ci right 1.447507e-04	k: 561	n:4210000
CHEK2   4210000 perm   7294 sec   (577 perm/sec)   p_kst 1.332542e-04   p_cons 5.729618e-01   p_joint 3.669834e-04

Joint ci ratio: 9.954980e-02	ci left: 3.490108e-04	ci right 3.858036e-04	k: 1549	n:4220000
Cons ci ratio: 1.647406e-03	ci left: 5.724893e-01	ci right 5.734334e-01	k: 2417897	n:4220000
KS ci ratio: 1.649046e-01	ci left: 1.228461e-04	ci right 1.451479e-04	k: 564	n:4220000
CHEK2   4220000 perm   7326 sec   (576 perm/sec)   p_kst 1.336493e-04   p_cons 5.729614e-01   p_joint 3.670616e-04

Joint ci ratio: 9.945361e-02	ci left: 3.488773e-04	ci right 3.856184e-04	k: 1552	n:4230000
Cons ci ratio: 1.645443e-03	ci left: 5.724942e-01	ci right 5.734372e-01	k: 2423645	n:4230000
KS ci ratio: 1.646135e-01	ci left: 1.230090e-04	ci right 1.452970e-04	k: 566	n:4230000
CHEK2   4230000 perm   7359 sec   (575 perm/sec)   p_kst 1.338061e-04   p_cons 5.729657e-01   p_joint 3.669031e-04

Joint ci ratio: 9.926202e-02	ci left: 3.494344e-04	ci right 3.861592e-04	k: 1558	n:4240000
Cons ci ratio: 1.643458e-03	ci left: 5.725075e-01	ci right 5.734494e-01	k: 2429429	n:4240000
KS ci ratio: 1.644685e-01	ci left: 1.229450e-04	ci right 1.451999e-04	k: 567	n:4240000
CHEK2   4240000 perm   7391 sec   (574 perm/sec)   p_kst 1.337264e-04   p_cons 5.729785e-01   p_joint 3.674528e-04

Joint ci ratio: 9.907153e-02	ci left: 3.499890e-04	ci right 3.866973e-04	k: 1564	n:4250000
Cons ci ratio: 1.641456e-03	ci left: 5.725282e-01	ci right 5.734689e-01	k: 2435244	n:4250000
KS ci ratio: 1.644685e-01	ci left: 1.226557e-04	ci right 1.448583e-04	k: 567	n:4250000
CHEK2   4250000 perm   7425 sec   (572 perm/sec)   p_kst 1.334118e-04   p_cons 5.729986e-01   p_joint 3.680000e-04

Joint ci ratio: 9.971098e-02	ci left: 3.445892e-04	ci right 3.809782e-04	k: 1544	n:4260000
Cons ci ratio: 1.639521e-03	ci left: 5.725311e-01	ci right 5.734707e-01	k: 2440984	n:4260000
KS ci ratio: 1.644686e-01	ci left: 1.223678e-04	ci right 1.445182e-04	k: 567	n:4260000
CHEK2   4260000 perm   7458 sec   (571 perm/sec)   p_kst 1.330986e-04   p_cons 5.730009e-01   p_joint 3.624413e-04

Joint ci ratio: 9.951791e-02	ci left: 3.451524e-04	ci right 3.815261e-04	k: 1550	n:4270000
Cons ci ratio: 1.637559e-03	ci left: 5.725438e-01	ci right 5.734823e-01	k: 2446766	n:4270000
KS ci ratio: 1.641798e-01	ci left: 1.225303e-04	ci right 1.446674e-04	k: 569	n:4270000
CHEK2   4270000 perm   7491 sec   (570 perm/sec)   p_kst 1.332553e-04   p_cons 5.730131e-01   p_joint 3.629977e-04

Joint ci ratio: 9.942181e-02	ci left: 3.450294e-04	ci right 3.813530e-04	k: 1553	n:4280000
Cons ci ratio: 1.635584e-03	ci left: 5.725625e-01	ci right 5.735000e-01	k: 2452574	n:4280000
KS ci ratio: 1.640359e-01	ci left: 1.224681e-04	ci right 1.445726e-04	k: 570	n:4280000
CHEK2   4280000 perm   7523 sec   (569 perm/sec)   p_kst 1.331776e-04   p_cons 5.730313e-01   p_joint 3.628505e-04

Joint ci ratio: 9.929409e-02	ci left: 3.451344e-04	ci right 3.814197e-04	k: 1557	n:4290000
Cons ci ratio: 1.633595e-03	ci left: 5.725875e-01	ci right 5.735238e-01	k: 2458409	n:4290000
KS ci ratio: 1.638925e-01	ci left: 1.224062e-04	ci right 1.444783e-04	k: 571	n:4290000
CHEK2   4290000 perm   7556 sec   (568 perm/sec)   p_kst 1.331002e-04   p_cons 5.730557e-01   p_joint 3.629371e-04

Joint ci ratio: 9.916687e-02	ci left: 3.452389e-04	ci right 3.814860e-04	k: 1561	n:4300000
Cons ci ratio: 1.631732e-03	ci left: 5.725770e-01	ci right 5.735122e-01	k: 2464092	n:4300000
KS ci ratio: 1.637494e-01	ci left: 1.223445e-04	ci right 1.443844e-04	k: 572	n:4300000
CHEK2   4300000 perm   7589 sec   (567 perm/sec)   p_kst 1.330233e-04   p_cons 5.730447e-01   p_joint 3.630233e-04

Joint ci ratio: 9.904014e-02	ci left: 3.453430e-04	ci right 3.815519e-04	k: 1565	n:4310000
Cons ci ratio: 1.629797e-03	ci left: 5.725897e-01	ci right 5.735239e-01	k: 2469875	n:4310000
KS ci ratio: 1.637494e-01	ci left: 1.220607e-04	ci right 1.440494e-04	k: 572	n:4310000
CHEK2   4310000 perm   7622 sec   (565 perm/sec)   p_kst 1.327146e-04   p_cons 5.730568e-01   p_joint 3.631090e-04

Joint ci ratio: 9.888239e-02	ci left: 3.456723e-04	ci right 3.818547e-04	k: 1570	n:4320000
Cons ci ratio: 1.627946e-03	ci left: 5.725792e-01	ci right 5.735123e-01	k: 2475558	n:4320000
KS ci ratio: 1.634644e-01	ci left: 1.222221e-04	ci right 1.441978e-04	k: 574	n:4320000
CHEK2   4320000 perm   7656 sec   (564 perm/sec)   p_kst 1.328704e-04   p_cons 5.730458e-01   p_joint 3.634259e-04

Joint ci ratio: 9.878812e-02	ci left: 3.455497e-04	ci right 3.816828e-04	k: 1573	n:4330000
Cons ci ratio: 1.626075e-03	ci left: 5.725767e-01	ci right 5.735087e-01	k: 2481275	n:4330000
KS ci ratio: 1.634644e-01	ci left: 1.219399e-04	ci right 1.438648e-04	k: 574	n:4330000
CHEK2   4330000 perm   7689 sec   (563 perm/sec)   p_kst 1.325635e-04   p_cons 5.730427e-01   p_joint 3.632794e-04

Joint ci ratio: 9.856914e-02	ci left: 3.463266e-04	ci right 3.824560e-04	k: 1580	n:4340000
Cons ci ratio: 1.624204e-03	ci left: 5.725762e-01	ci right 5.735071e-01	k: 2487001	n:4340000
KS ci ratio: 1.631809e-01	ci left: 1.221009e-04	ci right 1.440130e-04	k: 576	n:4340000
CHEK2   4340000 perm   7722 sec   (562 perm/sec)   p_kst 1.327189e-04   p_cons 5.730417e-01   p_joint 3.640553e-04

Joint ci ratio: 9.844468e-02	ci left: 3.464274e-04	ci right 3.825190e-04	k: 1584	n:4350000
Cons ci ratio: 1.622336e-03	ci left: 5.725769e-01	ci right 5.735067e-01	k: 2492732	n:4350000
KS ci ratio: 1.627583e-01	ci left: 1.224817e-04	ci right 1.443997e-04	k: 579	n:4350000
CHEK2   4350000 perm   7756 sec   (561 perm/sec)   p_kst 1.331034e-04   p_cons 5.730418e-01   p_joint 3.641379e-04

Joint ci ratio: 9.825885e-02	ci left: 3.469751e-04	ci right 3.830517e-04	k: 1590	n:4360000
Cons ci ratio: 1.620543e-03	ci left: 5.725566e-01	ci right 5.734855e-01	k: 2498372	n:4360000
KS ci ratio: 1.626181e-01	ci left: 1.224208e-04	ci right 1.443072e-04	k: 580	n:4360000
CHEK2   4360000 perm   7789 sec   (560 perm/sec)   p_kst 1.330275e-04   p_cons 5.730211e-01   p_joint 3.646789e-04

Joint ci ratio: 9.807407e-02	ci left: 3.475204e-04	ci right 3.835818e-04	k: 1596	n:4370000
Cons ci ratio: 1.618685e-03	ci left: 5.725580e-01	ci right 5.734858e-01	k: 2504106	n:4370000
KS ci ratio: 1.621999e-01	ci left: 1.227993e-04	ci right 1.446913e-04	k: 583	n:4370000
CHEK2   4370000 perm   7823 sec   (559 perm/sec)   p_kst 1.334096e-04   p_cons 5.730220e-01   p_joint 3.652174e-04

Joint ci ratio: 9.792088e-02	ci left: 3.478406e-04	ci right 3.838756e-04	k: 1601	n:4380000
Cons ci ratio: 1.616833e-03	ci left: 5.725594e-01	ci right 5.734861e-01	k: 2509840	n:4380000
KS ci ratio: 1.617849e-01	ci left: 1.231761e-04	ci right 1.450736e-04	k: 586	n:4380000
CHEK2   4380000 perm   7856 sec   (558 perm/sec)   p_kst 1.337900e-04   p_cons 5.730228e-01   p_joint 3.655251e-04

Joint ci ratio: 9.779886e-02	ci left: 3.479371e-04	ci right 3.839346e-04	k: 1605	n:4390000
Cons ci ratio: 1.615014e-03	ci left: 5.725528e-01	ci right 5.734785e-01	k: 2515539	n:4390000
KS ci ratio: 1.616472e-01	ci left: 1.231141e-04	ci right 1.449802e-04	k: 587	n:4390000
CHEK2   4390000 perm   7890 sec   (556 perm/sec)   p_kst 1.337130e-04   p_cons 5.730157e-01   p_joint 3.656036e-04

Joint ci ratio: 9.770765e-02	ci left: 3.478115e-04	ci right 3.837605e-04	k: 1608	n:4400000
Cons ci ratio: 1.613207e-03	ci left: 5.725447e-01	ci right 5.734693e-01	k: 2521231	n:4400000
KS ci ratio: 1.615100e-01	ci left: 1.230523e-04	ci right 1.448871e-04	k: 588	n:4400000
CHEK2   4400000 perm   7925 sec   (555 perm/sec)   p_kst 1.336364e-04   p_cons 5.730070e-01   p_joint 3.654545e-04

Joint ci ratio: 9.764700e-02	ci left: 3.474652e-04	ci right 3.833549e-04	k: 1610	n:4410000
Cons ci ratio: 1.611315e-03	ci left: 5.725640e-01	ci right 5.734876e-01	k: 2527044	n:4410000
KS ci ratio: 1.613730e-01	ci left: 1.229909e-04	ci right 1.447945e-04	k: 589	n:4410000
CHEK2   4410000 perm   7959 sec   (554 perm/sec)   p_kst 1.335601e-04   p_cons 5.730259e-01   p_joint 3.650794e-04

Joint ci ratio: 9.755622e-02	ci left: 3.473412e-04	ci right 3.831828e-04	k: 1613	n:4420000
Cons ci ratio: 1.609498e-03	ci left: 5.725622e-01	ci right 5.734847e-01	k: 2532764	n:4420000
KS ci ratio: 1.612365e-01	ci left: 1.229298e-04	ci right 1.447023e-04	k: 590	n:4420000
CHEK2   4420000 perm   7994 sec   (553 perm/sec)   p_kst 1.334842e-04   p_cons 5.730235e-01   p_joint 3.649321e-04

Joint ci ratio: 9.342076e-02	ci left: 3.787279e-04	ci right 4.160611e-04	k: 1759	n:4430000
Cons ci ratio: 1.607626e-03	ci left: 5.725794e-01	ci right 5.735009e-01	k: 2538568	n:4430000
KS ci ratio: 1.611002e-01	ci left: 1.228689e-04	ci right 1.446105e-04	k: 591	n:4430000
CHEK2   4430000 perm   8030 sec   (552 perm/sec)   p_kst 1.334086e-04   p_cons 5.730402e-01   p_joint 3.970655e-04

Joint ci ratio: 9.339426e-02	ci left: 3.780949e-04	ci right 4.153545e-04	k: 1760	n:4440000
Cons ci ratio: 1.605799e-03	ci left: 5.725848e-01	ci right 5.735052e-01	k: 2544320	n:4440000
KS ci ratio: 1.611002e-01	ci left: 1.225922e-04	ci right 1.442848e-04	k: 591	n:4440000
CHEK2   4440000 perm   8064 sec   (551 perm/sec)   p_kst 1.331081e-04   p_cons 5.730450e-01   p_joint 3.963964e-04

Joint ci ratio: 9.323554e-02	ci left: 3.785621e-04	ci right 4.158009e-04	k: 1766	n:4450000
Cons ci ratio: 1.603960e-03	ci left: 5.725956e-01	ci right 5.735149e-01	k: 2550096	n:4450000
KS ci ratio: 1.608288e-01	ci left: 1.227480e-04	ci right 1.444281e-04	k: 593	n:4450000
CHEK2   4450000 perm   8098 sec   (550 perm/sec)   p_kst 1.332584e-04   p_cons 5.730553e-01   p_joint 3.968539e-04

Joint ci ratio: 9.318284e-02	ci left: 3.781513e-04	ci right 4.153275e-04	k: 1768	n:4460000
Cons ci ratio: 1.602133e-03	ci left: 5.726045e-01	ci right 5.735228e-01	k: 2555864	n:4460000
KS ci ratio: 1.605587e-01	ci left: 1.229032e-04	ci right 1.445707e-04	k: 595	n:4460000
CHEK2   4460000 perm   8132 sec   (548 perm/sec)   p_kst 1.334081e-04   p_cons 5.730637e-01   p_joint 3.964126e-04

Joint ci ratio: 9.307767e-02	ci left: 3.781793e-04	ci right 4.153140e-04	k: 1772	n:4470000
Cons ci ratio: 1.600400e-03	ci left: 5.725867e-01	ci right 5.735040e-01	k: 2561513	n:4470000
KS ci ratio: 1.602900e-01	ci left: 1.230577e-04	ci right 1.447126e-04	k: 597	n:4470000
CHEK2   4470000 perm   8166 sec   (547 perm/sec)   p_kst 1.335570e-04   p_cons 5.730454e-01   p_joint 3.964206e-04

Joint ci ratio: 9.299903e-02	ci left: 3.779892e-04	ci right 4.150722e-04	k: 1775	n:4480000
Cons ci ratio: 1.598582e-03	ci left: 5.725965e-01	ci right 5.735128e-01	k: 2567285	n:4480000
KS ci ratio: 1.601561e-01	ci left: 1.229973e-04	ci right 1.446218e-04	k: 598	n:4480000
CHEK2   4480000 perm   8200 sec   (546 perm/sec)   p_kst 1.334821e-04   p_cons 5.730547e-01   p_joint 3.962054e-04

Joint ci ratio: 9.284232e-02	ci left: 3.784526e-04	ci right 4.155151e-04	k: 1781	n:4490000
Cons ci ratio: 1.596739e-03	ci left: 5.726160e-01	ci right 5.735313e-01	k: 2573101	n:4490000
KS ci ratio: 1.600226e-01	ci left: 1.229371e-04	ci right 1.445313e-04	k: 599	n:4490000
CHEK2   4490000 perm   8234 sec   (545 perm/sec)   p_kst 1.334076e-04   p_cons 5.730737e-01   p_joint 3.966592e-04

Joint ci ratio: 9.271233e-02	ci left: 3.786970e-04	ci right 4.157286e-04	k: 1786	n:4500000
Cons ci ratio: 1.594938e-03	ci left: 5.726246e-01	ci right 5.735388e-01	k: 2578868	n:4500000
KS ci ratio: 1.596240e-01	ci left: 1.233040e-04	ci right 1.449034e-04	k: 602	n:4500000
CHEK2   4500000 perm   8269 sec   (544 perm/sec)   p_kst 1.337778e-04   p_cons 5.730818e-01   p_joint 3.968889e-04

Joint ci ratio: 9.260874e-02	ci left: 3.787236e-04	ci right 4.157143e-04	k: 1790	n:4510000
Cons ci ratio: 1.593154e-03	ci left: 5.726296e-01	ci right 5.735428e-01	k: 2584619	n:4510000
KS ci ratio: 1.593600e-01	ci left: 1.234563e-04	ci right 1.450433e-04	k: 604	n:4510000
CHEK2   4510000 perm   8303 sec   (543 perm/sec)   p_kst 1.339246e-04   p_cons 5.730863e-01   p_joint 3.968958e-04

Joint ci ratio: 9.255710e-02	ci left: 3.783180e-04	ci right 4.152473e-04	k: 1792	n:4520000
Cons ci ratio: 1.591381e-03	ci left: 5.726332e-01	ci right 5.735454e-01	k: 2590364	n:4520000
KS ci ratio: 1.590972e-01	ci left: 1.236080e-04	ci right 1.451825e-04	k: 606	n:4520000
CHEK2   4520000 perm   8338 sec   (542 perm/sec)   p_kst 1.340708e-04   p_cons 5.730894e-01   p_joint 3.964602e-04

Joint ci ratio: 9.240260e-02	ci left: 3.787767e-04	ci right 4.156858e-04	k: 1798	n:4530000
Cons ci ratio: 1.589671e-03	ci left: 5.726190e-01	ci right 5.735302e-01	k: 2596028	n:4530000
KS ci ratio: 1.590972e-01	ci left: 1.233352e-04	ci right 1.448620e-04	k: 606	n:4530000
CHEK2   4530000 perm   8372 sec   (541 perm/sec)   p_kst 1.337748e-04   p_cons 5.730746e-01   p_joint 3.969095e-04

Joint ci ratio: 9.232566e-02	ci left: 3.785879e-04	ci right 4.154462e-04	k: 1801	n:4540000
Cons ci ratio: 1.587940e-03	ci left: 5.726131e-01	ci right 5.735233e-01	k: 2601730	n:4540000
KS ci ratio: 1.589663e-01	ci left: 1.232750e-04	ci right 1.447719e-04	k: 607	n:4540000
CHEK2   4540000 perm   8407 sec   (540 perm/sec)   p_kst 1.337004e-04   p_cons 5.730683e-01   p_joint 3.966960e-04

Joint ci ratio: 9.222336e-02	ci left: 3.786147e-04	ci right 4.154325e-04	k: 1805	n:4550000
Cons ci ratio: 1.586124e-03	ci left: 5.726352e-01	ci right 5.735444e-01	k: 2607559	n:4550000
KS ci ratio: 1.585756e-01	ci left: 1.236372e-04	ci right 1.451393e-04	k: 610	n:4550000
CHEK2   4550000 perm   8442 sec   (539 perm/sec)   p_kst 1.340659e-04   p_cons 5.730899e-01   p_joint 3.967033e-04

Joint ci ratio: 9.214687e-02	ci left: 3.784271e-04	ci right 4.151946e-04	k: 1808	n:4560000
Cons ci ratio: 1.584388e-03	ci left: 5.726345e-01	ci right 5.735426e-01	k: 2613284	n:4560000
KS ci ratio: 1.585756e-01	ci left: 1.233661e-04	ci right 1.448210e-04	k: 610	n:4560000
CHEK2   4560000 perm   8477 sec   (538 perm/sec)   p_kst 1.337719e-04   p_cons 5.730886e-01   p_joint 3.964912e-04

Joint ci ratio: 9.199441e-02	ci left: 3.788818e-04	ci right 4.156292e-04	k: 1814	n:4570000
Cons ci ratio: 1.582635e-03	ci left: 5.726407e-01	ci right 5.735479e-01	k: 2619041	n:4570000
KS ci ratio: 1.583167e-01	ci left: 1.235164e-04	ci right 1.449591e-04	k: 612	n:4570000
CHEK2   4570000 perm   8512 sec   (537 perm/sec)   p_kst 1.339168e-04   p_cons 5.730943e-01   p_joint 3.969365e-04

Joint ci ratio: 9.186795e-02	ci left: 3.791211e-04	ci right 4.158385e-04	k: 1819	n:4580000
Cons ci ratio: 1.580886e-03	ci left: 5.726475e-01	ci right 5.735537e-01	k: 2624801	n:4580000
KS ci ratio: 1.580590e-01	ci left: 1.236661e-04	ci right 1.450965e-04	k: 614	n:4580000
CHEK2   4580000 perm   8547 sec   (536 perm/sec)   p_kst 1.340611e-04   p_cons 5.731007e-01   p_joint 3.971616e-04

Joint ci ratio: 9.169176e-02	ci left: 3.797852e-04	ci right 4.164926e-04	k: 1826	n:4590000
Cons ci ratio: 1.579142e-03	ci left: 5.726543e-01	ci right 5.735595e-01	k: 2630561	n:4590000
KS ci ratio: 1.578026e-01	ci left: 1.238152e-04	ci right 1.452333e-04	k: 616	n:4590000
CHEK2   4590000 perm   8582 sec   (535 perm/sec)   p_kst 1.342048e-04   p_cons 5.731070e-01   p_joint 3.978214e-04

Joint ci ratio: 9.154155e-02	ci left: 3.802340e-04	ci right 4.169214e-04	k: 1832	n:4600000
Cons ci ratio: 1.577462e-03	ci left: 5.726433e-01	ci right 5.735475e-01	k: 2636239	n:4600000
KS ci ratio: 1.574204e-01	ci left: 1.241725e-04	ci right 1.455955e-04	k: 619	n:4600000
CHEK2   4600000 perm   8618 sec   (534 perm/sec)   p_kst 1.345652e-04   p_cons 5.730954e-01   p_joint 3.982609e-04

Joint ci ratio: 9.154159e-02	ci left: 3.794092e-04	ci right 4.160170e-04	k: 1832	n:4610000
Cons ci ratio: 1.575738e-03	ci left: 5.726477e-01	ci right 5.735509e-01	k: 2641988	n:4610000
KS ci ratio: 1.574204e-01	ci left: 1.239031e-04	ci right 1.452796e-04	k: 619	n:4610000
CHEK2   4610000 perm   8653 sec   (533 perm/sec)   p_kst 1.342733e-04   p_cons 5.730993e-01   p_joint 3.973970e-04

Joint ci ratio: 9.224919e-02	ci left: 3.726666e-04	ci right 4.089167e-04	k: 1804	n:4620000
Cons ci ratio: 1.574022e-03	ci left: 5.726510e-01	ci right 5.735533e-01	k: 2647732	n:4620000
KS ci ratio: 1.571671e-01	ci left: 1.240508e-04	ci right 1.454151e-04	k: 621	n:4620000
CHEK2   4620000 perm   8690 sec   (532 perm/sec)   p_kst 1.344156e-04   p_cons 5.731022e-01   p_joint 3.904762e-04

Joint ci ratio: 9.207080e-02	ci left: 3.733388e-04	ci right 4.095802e-04	k: 1811	n:4630000
Cons ci ratio: 1.572289e-03	ci left: 5.726616e-01	ci right 5.735629e-01	k: 2653510	n:4630000
KS ci ratio: 1.569150e-01	ci left: 1.241979e-04	ci right 1.455500e-04	k: 623	n:4630000
CHEK2   4630000 perm   8726 sec   (531 perm/sec)   p_kst 1.345572e-04   p_cons 5.731123e-01   p_joint 3.911447e-04

Joint ci ratio: 9.191872e-02	ci left: 3.737975e-04	ci right 4.100204e-04	k: 1817	n:4640000
Cons ci ratio: 1.570586e-03	ci left: 5.726644e-01	ci right 5.735648e-01	k: 2659252	n:4640000
KS ci ratio: 1.565391e-01	ci left: 1.245514e-04	ci right 1.459082e-04	k: 626	n:4640000
CHEK2   4640000 perm   8761 sec   (530 perm/sec)   p_kst 1.349138e-04   p_cons 5.731147e-01   p_joint 3.915948e-04

Joint ci ratio: 9.174224e-02	ci left: 3.744645e-04	ci right 4.106785e-04	k: 1824	n:4650000
Cons ci ratio: 1.568897e-03	ci left: 5.726647e-01	ci right 5.735640e-01	k: 2664982	n:4650000
KS ci ratio: 1.562900e-01	ci left: 1.246968e-04	ci right 1.460413e-04	k: 628	n:4650000
CHEK2   4650000 perm   8796 sec   (529 perm/sec)   p_kst 1.350538e-04   p_cons 5.731144e-01   p_joint 3.922581e-04

Joint ci ratio: 9.159178e-02	ci left: 3.749189e-04	ci right 4.111143e-04	k: 1830	n:4660000
Cons ci ratio: 1.567246e-03	ci left: 5.726548e-01	ci right 5.735532e-01	k: 2670665	n:4660000
KS ci ratio: 1.560422e-01	ci left: 1.248417e-04	ci right 1.461739e-04	k: 630	n:4660000
CHEK2   4660000 perm   8833 sec   (528 perm/sec)   p_kst 1.351931e-04   p_cons 5.731041e-01   p_joint 3.927039e-04

Joint ci ratio: 9.149190e-02	ci left: 3.749530e-04	ci right 4.111101e-04	k: 1834	n:4670000
Cons ci ratio: 1.565568e-03	ci left: 5.726551e-01	ci right 5.735525e-01	k: 2676395	n:4670000
KS ci ratio: 1.556725e-01	ci left: 1.251917e-04	ci right 1.465283e-04	k: 633	n:4670000
CHEK2   4670000 perm   8868 sec   (527 perm/sec)   p_kst 1.355460e-04   p_cons 5.731039e-01   p_joint 3.927195e-04

Joint ci ratio: 9.129307e-02	ci left: 3.758222e-04	ci right 4.119801e-04	k: 1842	n:4680000
Cons ci ratio: 1.563879e-03	ci left: 5.726605e-01	ci right 5.735570e-01	k: 2682149	n:4680000
KS ci ratio: 1.555499e-01	ci left: 1.251295e-04	ci right 1.464372e-04	k: 634	n:4680000
CHEK2   4680000 perm   8904 sec   (526 perm/sec)   p_kst 1.354701e-04   p_cons 5.731088e-01   p_joint 3.935897e-04

Joint ci ratio: 9.121887e-02	ci left: 3.756459e-04	ci right 4.117560e-04	k: 1845	n:4690000
Cons ci ratio: 1.562148e-03	ci left: 5.726806e-01	ci right 5.735761e-01	k: 2687972	n:4690000
KS ci ratio: 1.554276e-01	ci left: 1.250677e-04	ci right 1.463465e-04	k: 635	n:4690000
CHEK2   4690000 perm   8939 sec   (525 perm/sec)   p_kst 1.353945e-04   p_cons 5.731284e-01   p_joint 3.933902e-04

Joint ci ratio: 9.121891e-02	ci left: 3.748467e-04	ci right 4.108799e-04	k: 1845	n:4700000
Cons ci ratio: 1.560509e-03	ci left: 5.726737e-01	ci right 5.735683e-01	k: 2693669	n:4700000
KS ci ratio: 1.554276e-01	ci left: 1.248016e-04	ci right 1.460351e-04	k: 635	n:4700000
CHEK2   4700000 perm   8976 sec   (524 perm/sec)   p_kst 1.351064e-04   p_cons 5.731211e-01   p_joint 3.925532e-04

Joint ci ratio: 9.119424e-02	ci left: 3.742583e-04	ci right 4.102247e-04	k: 1846	n:4710000
Cons ci ratio: 1.558839e-03	ci left: 5.726780e-01	ci right 5.735716e-01	k: 2699418	n:4710000
KS ci ratio: 1.554276e-01	ci left: 1.245366e-04	ci right 1.457250e-04	k: 635	n:4710000
CHEK2   4710000 perm   9012 sec   (523 perm/sec)   p_kst 1.348195e-04   p_cons 5.731248e-01   p_joint 3.919321e-04

Joint ci ratio: 9.116959e-02	ci left: 3.736724e-04	ci right 4.095723e-04	k: 1847	n:4720000
Cons ci ratio: 1.557120e-03	ci left: 5.726996e-01	ci right 5.735923e-01	k: 2705249	n:4720000
KS ci ratio: 1.553056e-01	ci left: 1.244764e-04	ci right 1.456364e-04	k: 636	n:4720000
CHEK2   4720000 perm   9048 sec   (522 perm/sec)   p_kst 1.347458e-04   p_cons 5.731460e-01   p_joint 3.913136e-04

Joint ci ratio: 9.109569e-02	ci left: 3.735022e-04	ci right 4.093551e-04	k: 1850	n:4730000
Cons ci ratio: 1.555487e-03	ci left: 5.726957e-01	ci right 5.735875e-01	k: 2710960	n:4730000
KS ci ratio: 1.551838e-01	ci left: 1.244164e-04	ci right 1.455481e-04	k: 637	n:4730000
CHEK2   4730000 perm   9084 sec   (521 perm/sec)   p_kst 1.346723e-04   p_cons 5.731416e-01   p_joint 3.911205e-04

Joint ci ratio: 9.097289e-02	ci left: 3.737450e-04	ci right 4.095703e-04	k: 1855	n:4740000
Cons ci ratio: 1.553885e-03	ci left: 5.726837e-01	ci right 5.735745e-01	k: 2716632	n:4740000
KS ci ratio: 1.549411e-01	ci left: 1.245595e-04	ci right 1.456793e-04	k: 639	n:4740000
CHEK2   4740000 perm   9120 sec   (520 perm/sec)   p_kst 1.348101e-04   p_cons 5.731291e-01   p_joint 3.913502e-04

Joint ci ratio: 9.089946e-02	ci left: 3.735754e-04	ci right 4.093540e-04	k: 1858	n:4750000
Cons ci ratio: 1.552238e-03	ci left: 5.726875e-01	ci right 5.735773e-01	k: 2722379	n:4750000
KS ci ratio: 1.546996e-01	ci left: 1.247020e-04	ci right 1.458100e-04	k: 641	n:4750000
CHEK2   4750000 perm   9157 sec   (519 perm/sec)   p_kst 1.349474e-04   p_cons 5.731324e-01   p_joint 3.911579e-04

Joint ci ratio: 9.087505e-02	ci left: 3.729959e-04	ci right 4.087089e-04	k: 1859	n:4760000
Cons ci ratio: 1.550649e-03	ci left: 5.726746e-01	ci right 5.735635e-01	k: 2728047	n:4760000
KS ci ratio: 1.545793e-01	ci left: 1.246420e-04	ci right 1.457219e-04	k: 642	n:4760000
CHEK2   4760000 perm   9194 sec   (518 perm/sec)   p_kst 1.348739e-04   p_cons 5.731191e-01   p_joint 3.905462e-04

Joint ci ratio: 9.080186e-02	ci left: 3.728286e-04	ci right 4.084953e-04	k: 1862	n:4770000
Cons ci ratio: 1.549084e-03	ci left: 5.726555e-01	ci right 5.735435e-01	k: 2733685	n:4770000
KS ci ratio: 1.544592e-01	ci left: 1.245822e-04	ci right 1.456341e-04	k: 643	n:4770000
CHEK2   4770000 perm   9231 sec   (517 perm/sec)   p_kst 1.348008e-04   p_cons 5.730996e-01   p_joint 3.903564e-04

Joint ci ratio: 9.065598e-02	ci left: 3.732754e-04	ci right 4.089244e-04	k: 1868	n:4780000
Cons ci ratio: 1.547501e-03	ci left: 5.726439e-01	ci right 5.735309e-01	k: 2739358	n:4780000
KS ci ratio: 1.543394e-01	ci left: 1.245227e-04	ci right 1.455467e-04	k: 644	n:4780000
CHEK2   4780000 perm   9270 sec   (516 perm/sec)   p_kst 1.347280e-04   p_cons 5.730874e-01   p_joint 3.907950e-04

Joint ci ratio: 9.053495e-02	ci left: 3.735163e-04	ci right 4.091381e-04	k: 1873	n:4790000
Cons ci ratio: 1.545870e-03	ci left: 5.726492e-01	ci right 5.735353e-01	k: 2745112	n:4790000
KS ci ratio: 1.542199e-01	ci left: 1.244634e-04	ci right 1.454597e-04	k: 645	n:4790000
CHEK2   4790000 perm   9306 sec   (515 perm/sec)   p_kst 1.346555e-04   p_cons 5.730923e-01   p_joint 3.910230e-04

Joint ci ratio: 9.043848e-02	ci left: 3.735526e-04	ci right 4.091380e-04	k: 1877	n:4800000
Cons ci ratio: 1.544240e-03	ci left: 5.726557e-01	ci right 5.735409e-01	k: 2750872	n:4800000
KS ci ratio: 1.539817e-01	ci left: 1.246047e-04	ci right 1.455894e-04	k: 647	n:4800000
CHEK2   4800000 perm   9344 sec   (514 perm/sec)   p_kst 1.347917e-04   p_cons 5.730983e-01   p_joint 3.910417e-04

Joint ci ratio: 9.039038e-02	ci left: 3.731824e-04	ci right 4.087126e-04	k: 1879	n:4810000
Cons ci ratio: 1.542656e-03	ci left: 5.726489e-01	ci right 5.735332e-01	k: 2756568	n:4810000
KS ci ratio: 1.537446e-01	ci left: 1.247455e-04	ci right 1.457185e-04	k: 649	n:4810000
CHEK2   4810000 perm   9381 sec   (513 perm/sec)   p_kst 1.349272e-04   p_cons 5.730911e-01   p_joint 3.906445e-04

Joint ci ratio: 9.034236e-02	ci left: 3.728137e-04	ci right 4.082889e-04	k: 1881	n:4820000
Cons ci ratio: 1.541091e-03	ci left: 5.726382e-01	ci right 5.735215e-01	k: 2762245	n:4820000
KS ci ratio: 1.537447e-01	ci left: 1.244867e-04	ci right 1.454162e-04	k: 649	n:4820000
CHEK2   4820000 perm   9419 sec   (512 perm/sec)   p_kst 1.346473e-04   p_cons 5.730799e-01   p_joint 3.902490e-04

Joint ci ratio: 9.027044e-02	ci left: 3.726489e-04	ci right 4.080787e-04	k: 1884	n:4830000
Cons ci ratio: 1.539508e-03	ci left: 5.726343e-01	ci right 5.735167e-01	k: 2767955	n:4830000
KS ci ratio: 1.535087e-01	ci left: 1.246271e-04	ci right 1.455451e-04	k: 651	n:4830000
CHEK2   4830000 perm   9457 sec   (511 perm/sec)   p_kst 1.347826e-04   p_cons 5.730756e-01   p_joint 3.900621e-04

Joint ci ratio: 8.754820e-02	ci left: 3.959194e-04	ci right 4.323685e-04	k: 2003	n:4840000
Cons ci ratio: 1.537909e-03	ci left: 5.726373e-01	ci right 5.735188e-01	k: 2773698	n:4840000
KS ci ratio: 1.531567e-01	ci left: 1.249657e-04	ci right 1.458880e-04	k: 654	n:4840000
CHEK2   4840000 perm   9494 sec   (510 perm/sec)   p_kst 1.351240e-04   p_cons 5.730781e-01   p_joint 4.138430e-04

Joint ci ratio: 8.748276e-02	ci left: 3.957081e-04	ci right 4.321092e-04	k: 2006	n:4850000
Cons ci ratio: 1.536302e-03	ci left: 5.726442e-01	ci right 5.735248e-01	k: 2779460	n:4850000
KS ci ratio: 1.530399e-01	ci left: 1.249063e-04	ci right 1.458013e-04	k: 655	n:4850000
CHEK2   4850000 perm   9533 sec   (509 perm/sec)   p_kst 1.350515e-04   p_cons 5.730845e-01   p_joint 4.136082e-04

Joint ci ratio: 8.737398e-02	ci left: 3.959002e-04	ci right 4.322713e-04	k: 2011	n:4860000
Cons ci ratio: 1.534758e-03	ci left: 5.726329e-01	ci right 5.735127e-01	k: 2785134	n:4860000
KS ci ratio: 1.530399e-01	ci left: 1.246493e-04	ci right 1.455013e-04	k: 655	n:4860000
CHEK2   4860000 perm   9571 sec   (508 perm/sec)   p_kst 1.347737e-04   p_cons 5.730728e-01   p_joint 4.137860e-04

Joint ci ratio: 8.905019e-02	ci left: 3.800264e-04	ci right 4.156439e-04	k: 1936	n:4870000
Cons ci ratio: 1.533178e-03	ci left: 5.726343e-01	ci right 5.735131e-01	k: 2790869	n:4870000
KS ci ratio: 1.634656e-01	ci left: 1.084187e-04	ci right 1.279127e-04	k: 574	n:4870000
CHEK2   4870000 perm   9609 sec   (507 perm/sec)   p_kst 1.178645e-04   p_cons 5.730737e-01   p_joint 3.975359e-04

Joint ci ratio: 8.895838e-02	ci left: 3.800491e-04	ci right 4.156300e-04	k: 1940	n:4880000
Cons ci ratio: 1.531641e-03	ci left: 5.726239e-01	ci right 5.735018e-01	k: 2796547	n:4880000
KS ci ratio: 1.633237e-01	ci left: 1.083931e-04	ci right 1.278639e-04	k: 575	n:4880000
CHEK2   4880000 perm   9646 sec   (506 perm/sec)   p_kst 1.178279e-04   p_cons 5.730629e-01   p_joint 3.975410e-04

Joint ci ratio: 8.891260e-02	ci left: 3.796718e-04	ci right 4.151982e-04	k: 1942	n:4890000
Cons ci ratio: 1.530055e-03	ci left: 5.726302e-01	ci right 5.735072e-01	k: 2802306	n:4890000
KS ci ratio: 1.631821e-01	ci left: 1.083676e-04	ci right 1.278153e-04	k: 576	n:4890000
CHEK2   4890000 perm   9685 sec   (505 perm/sec)   p_kst 1.177914e-04   p_cons 5.730687e-01   p_joint 3.971370e-04

Joint ci ratio: 8.882122e-02	ci left: 3.796951e-04	ci right 4.151853e-04	k: 1946	n:4900000
Cons ci ratio: 1.528480e-03	ci left: 5.726348e-01	ci right 5.735109e-01	k: 2808057	n:4900000
KS ci ratio: 1.630409e-01	ci left: 1.083422e-04	ci right 1.277668e-04	k: 577	n:4900000
CHEK2   4900000 perm   9724 sec   (504 perm/sec)   p_kst 1.177551e-04   p_cons 5.730729e-01   p_joint 3.971429e-04

Joint ci ratio: 8.879845e-02	ci left: 3.791210e-04	ci right 4.145479e-04	k: 1947	n:4910000
Cons ci ratio: 1.526891e-03	ci left: 5.726456e-01	ci right 5.735209e-01	k: 2813839	n:4910000
KS ci ratio: 1.630409e-01	ci left: 1.081215e-04	ci right 1.275066e-04	k: 577	n:4910000
CHEK2   4910000 perm   9763 sec   (503 perm/sec)   p_kst 1.175153e-04   p_cons 5.730833e-01   p_joint 3.965377e-04

Joint ci ratio: 8.875292e-02	ci left: 3.787479e-04	ci right 4.141208e-04	k: 1949	n:4920000
Cons ci ratio: 1.525383e-03	ci left: 5.726317e-01	ci right 5.735060e-01	k: 2819499	n:4920000
KS ci ratio: 1.627595e-01	ci left: 1.082917e-04	ci right 1.276705e-04	k: 579	n:4920000
CHEK2   4920000 perm   9801 sec   (502 perm/sec)   p_kst 1.176829e-04   p_cons 5.730689e-01   p_joint 3.961382e-04

Joint ci ratio: 8.866203e-02	ci left: 3.787730e-04	ci right 4.141102e-04	k: 1953	n:4930000
Cons ci ratio: 1.523895e-03	ci left: 5.726129e-01	ci right 5.734864e-01	k: 2825135	n:4930000
KS ci ratio: 1.626194e-01	ci left: 1.082666e-04	ci right 1.276226e-04	k: 580	n:4930000
CHEK2   4930000 perm   9840 sec   (501 perm/sec)   p_kst 1.176471e-04   p_cons 5.730497e-01   p_joint 3.961460e-04

Joint ci ratio: 8.857142e-02	ci left: 3.787980e-04	ci right 4.140996e-04	k: 1957	n:4940000
Cons ci ratio: 1.522389e-03	ci left: 5.726013e-01	ci right 5.734739e-01	k: 2830806	n:4940000
KS ci ratio: 1.624796e-01	ci left: 1.082417e-04	ci right 1.275750e-04	k: 581	n:4940000
CHEK2   4940000 perm   9879 sec   (500 perm/sec)   p_kst 1.176113e-04   p_cons 5.730377e-01   p_joint 3.961538e-04

Joint ci ratio: 8.895863e-02	ci left: 3.746746e-04	ci right 4.097525e-04	k: 1940	n:4950000
Cons ci ratio: 1.520787e-03	ci left: 5.726223e-01	ci right 5.734940e-01	k: 2836638	n:4950000
KS ci ratio: 1.620625e-01	ci left: 1.086044e-04	ci right 1.279479e-04	k: 584	n:4950000
CHEK2   4950000 perm   9919 sec   (499 perm/sec)   p_kst 1.179798e-04   p_cons 5.730582e-01   p_joint 3.919192e-04

Joint ci ratio: 8.875306e-02	ci left: 3.756934e-04	ci right 4.107812e-04	k: 1949	n:4960000
Cons ci ratio: 1.519244e-03	ci left: 5.726256e-01	ci right 5.734964e-01	k: 2842383	n:4960000
KS ci ratio: 1.619241e-01	ci left: 1.085789e-04	ci right 1.278997e-04	k: 585	n:4960000
CHEK2   4960000 perm   9957 sec   (498 perm/sec)   p_kst 1.179435e-04   p_cons 5.730611e-01   p_joint 3.929435e-04

Joint ci ratio: 8.868487e-02	ci left: 3.755277e-04	ci right 4.105717e-04	k: 1952	n:4970000
Cons ci ratio: 1.517705e-03	ci left: 5.726292e-01	ci right 5.734991e-01	k: 2848129	n:4970000
KS ci ratio: 1.617861e-01	ci left: 1.085535e-04	ci right 1.278517e-04	k: 586	n:4970000
CHEK2   4970000 perm   9995 sec   (497 perm/sec)   p_kst 1.179074e-04   p_cons 5.730642e-01   p_joint 3.927565e-04

Joint ci ratio: 8.861685e-02	ci left: 3.753627e-04	ci right 4.103630e-04	k: 1955	n:4980000
Cons ci ratio: 1.516198e-03	ci left: 5.726239e-01	ci right 5.734929e-01	k: 2853831	n:4980000
KS ci ratio: 1.617862e-01	ci left: 1.083355e-04	ci right 1.275950e-04	k: 586	n:4980000
CHEK2   4980000 perm   10035 sec   (496 perm/sec)   p_kst 1.176707e-04   p_cons 5.730584e-01   p_joint 3.925703e-04

Joint ci ratio: 8.854898e-02	ci left: 3.751984e-04	ci right 4.101552e-04	k: 1958	n:4990000
Cons ci ratio: 1.514663e-03	ci left: 5.726294e-01	ci right 5.734976e-01	k: 2859587	n:4990000
KS ci ratio: 1.616485e-01	ci left: 1.083107e-04	ci right 1.275478e-04	k: 587	n:4990000
CHEK2   4990000 perm   10074 sec   (495 perm/sec)   p_kst 1.176353e-04   p_cons 5.730635e-01   p_joint 3.923848e-04

Joint ci ratio: 9.051154e-02	ci left: 3.580239e-04	ci right 3.921590e-04	k: 1874	n:5000000
Cons ci ratio: 1.513131e-03	ci left: 5.726351e-01	ci right 5.735024e-01	k: 2865344	n:5000000
KS ci ratio: 1.615113e-01	ci left: 1.082860e-04	ci right 1.275008e-04	k: 588	n:5000000
CHEK2   5000000 perm   10113 sec   (494 perm/sec)   p_kst 1.176000e-04   p_cons 5.730688e-01   p_joint 3.748000e-04

Outputting figure to mutsig2_images.part000000000037/CHEK2.4_1821_5000000_0.0001176_0.57307_0.0003748.png
                gene_name: CHEK2
               theta_stop: 0.16 
                    nperm: 5000000 
                     p_ks: 0.00012 
        ci_ks_bounds_left: 0.00011 
       ci_ks_bounds_right: 0.00013 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.57 
                  p_joint: 0.00037 
     ci_joint_bounds_left: 0.00036 
    ci_joint_bounds_right: 0.00039 

Current progress: 33 percent done.
CGN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.722167e-02	ci left: 5.159569e-01	ci right 5.356281e-01	k: 5258	n:10000
Cons ci ratio: 2.340422e-02	ci left: 7.284549e-01	ci right 7.458068e-01	k: 7372	n:10000
KS ci ratio: 5.419274e-02	ci left: 3.340900e-01	ci right 3.528013e-01	k: 3434	n:10000
CGN   10000 perm   2 sec   (5437 perm/sec)   p_kst 3.434000e-01   p_cons 7.372000e-01   p_joint 5.258000e-01

Outputting figure to mutsig2_images.part000000000037/CGN.3_3692_10000_0.3434_0.7372_0.5258.png
                gene_name: CGN
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.34 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.35 
                   p_cons: 0.74 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.75 
                  p_joint: 0.53 
     ci_joint_bounds_left: 0.52 
    ci_joint_bounds_right: 0.54 

Current progress: 50 percent done.
CHD3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.221968e-01	ci left: 8.757121e-02	ci right 9.906697e-02	k: 932	n:10000
Cons ci ratio: 4.966014e-02	ci left: 3.742535e-01	ci right 3.934142e-01	k: 3838	n:10000
KS ci ratio: 2.403906e-01	ci left: 2.278143e-02	ci right 2.909884e-02	k: 258	n:10000
CHD3   10000 perm   2 sec   (4601 perm/sec)   p_kst 2.580000e-02   p_cons 3.838000e-01   p_joint 9.320000e-02

Joint ci ratio: 8.413924e-02	ci left: 9.376599e-02	ci right 1.020513e-01	k: 1957	n:20000
Cons ci ratio: 3.519660e-02	ci left: 3.760062e-01	ci right 3.895279e-01	k: 7655	n:20000
KS ci ratio: 1.706635e-01	ci left: 2.350321e-02	ci right 2.793614e-02	k: 513	n:20000
CHD3   20000 perm   5 sec   (4045 perm/sec)   p_kst 2.565000e-02   p_cons 3.827500e-01   p_joint 9.785000e-02

Joint ci ratio: 7.764855e-02	ci left: 7.525161e-02	ci right 8.136369e-02	k: 2348	n:30000
Cons ci ratio: 2.894367e-02	ci left: 3.739043e-01	ci right 3.849190e-01	k: 11382	n:30000
KS ci ratio: 1.408546e-01	ci left: 2.339150e-02	ci right 2.696793e-02	k: 754	n:30000
CHD3   30000 perm   8 sec   (3942 perm/sec)   p_kst 2.513333e-02   p_cons 3.794000e-01   p_joint 7.826667e-02

Joint ci ratio: 8.394191e-02	ci left: 4.952572e-02	ci right 5.388965e-02	k: 2067	n:40000
Cons ci ratio: 2.508634e-02	ci left: 3.742671e-01	ci right 3.838005e-01	k: 15161	n:40000
KS ci ratio: 1.227155e-01	ci left: 2.334655e-02	ci right 2.642295e-02	k: 994	n:40000
CHD3   40000 perm   10 sec   (3867 perm/sec)   p_kst 2.485000e-02   p_cons 3.790250e-01   p_joint 5.167500e-02

Joint ci ratio: 9.215981e-02	ci left: 3.330840e-02	ci right 3.654589e-02	k: 1745	n:50000
Cons ci ratio: 2.238128e-02	ci left: 3.759621e-01	ci right 3.844919e-01	k: 19011	n:50000
KS ci ratio: 1.102958e-01	ci left: 2.327936e-02	ci right 2.601621e-02	k: 1231	n:50000
CHD3   50000 perm   13 sec   (3799 perm/sec)   p_kst 2.462000e-02   p_cons 3.802200e-01   p_joint 3.490000e-02

Joint ci ratio: 6.366299e-02	ci left: 5.753810e-02	ci right 6.133799e-02	k: 3565	n:60000
Cons ci ratio: 2.044668e-02	ci left: 3.759807e-01	ci right 3.837643e-01	k: 22792	n:60000
KS ci ratio: 1.008400e-01	ci left: 2.332648e-02	ci right 2.581980e-02	k: 1473	n:60000
CHD3   60000 perm   16 sec   (3750 perm/sec)   p_kst 2.455000e-02   p_cons 3.798667e-01   p_joint 5.941667e-02

Joint ci ratio: 6.216966e-02	ci left: 5.206960e-02	ci right 5.542466e-02	k: 3761	n:70000
Cons ci ratio: 1.892067e-02	ci left: 3.765020e-01	ci right 3.837080e-01	k: 26607	n:70000
KS ci ratio: 9.439662e-02	ci left: 2.290675e-02	ci right 2.519008e-02	k: 1682	n:70000
CHD3   70000 perm   19 sec   (3703 perm/sec)   p_kst 2.402857e-02   p_cons 3.801000e-01   p_joint 5.372857e-02

Outputting figure to mutsig2_images.part000000000037/CHD3.3_6444_70000_0.024029_0.3801_0.053729.png
                gene_name: CHD3
               theta_stop: 0.094 
                    nperm: 70000 
                     p_ks: 0.024 
        ci_ks_bounds_left: 0.023 
       ci_ks_bounds_right: 0.025 
                   p_cons: 0.38 
      ci_cons_bounds_left: 0.38 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.054 
     ci_joint_bounds_left: 0.052 
    ci_joint_bounds_right: 0.055 

Current progress: 67 percent done.
CHD7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.643344e-02	ci left: 1.349198e-01	ci right 1.486895e-01	k: 1417	n:10000
Cons ci ratio: 3.832596e-02	ci left: 5.013506e-01	ci right 5.210429e-01	k: 5112	n:10000
KS ci ratio: 2.682907e-01	ci left: 1.809309e-02	ci right 2.379077e-02	k: 208	n:10000
CHD7   10000 perm   2 sec   (4112 perm/sec)   p_kst 2.080000e-02   p_cons 5.112000e-01   p_joint 1.417000e-01

Joint ci ratio: 7.413374e-02	ci left: 1.180846e-01	ci right 1.272254e-01	k: 2452	n:20000
Cons ci ratio: 2.715680e-02	ci left: 5.032459e-01	ci right 5.171512e-01	k: 10204	n:20000
KS ci ratio: 1.970633e-01	ci left: 1.748601e-02	ci right 2.135550e-02	k: 387	n:20000
CHD7   20000 perm   5 sec   (3766 perm/sec)   p_kst 1.935000e-02   p_cons 5.102000e-01   p_joint 1.226000e-01

Joint ci ratio: 7.374954e-02	ci left: 8.288374e-02	ci right 8.926335e-02	k: 2581	n:30000
Cons ci ratio: 2.212227e-02	ci left: 5.056927e-01	ci right 5.170385e-01	k: 15341	n:30000
KS ci ratio: 1.614696e-01	ci left: 1.770919e-02	ci right 2.085155e-02	k: 577	n:30000
CHD7   30000 perm   8 sec   (3632 perm/sec)   p_kst 1.923333e-02   p_cons 5.113667e-01   p_joint 8.603333e-02

Joint ci ratio: 6.620787e-02	ci left: 7.790107e-02	ci right 8.326001e-02	k: 3222	n:40000
Cons ci ratio: 1.915549e-02	ci left: 5.065382e-01	ci right 5.163601e-01	k: 20458	n:40000
KS ci ratio: 1.385295e-01	ci left: 1.826400e-02	ci right 2.100637e-02	k: 784	n:40000
CHD7   40000 perm   11 sec   (3527 perm/sec)   p_kst 1.960000e-02   p_cons 5.114500e-01   p_joint 8.055000e-02

Joint ci ratio: 6.454518e-02	ci left: 6.647828e-02	ci right 7.093195e-02	k: 3434	n:50000
Cons ci ratio: 1.712543e-02	ci left: 5.072880e-01	ci right 5.160706e-01	k: 25584	n:50000
KS ci ratio: 1.236000e-01	ci left: 1.849986e-02	ci right 2.095634e-02	k: 985	n:50000
CHD7   50000 perm   15 sec   (3443 perm/sec)   p_kst 1.970000e-02   p_cons 5.116800e-01   p_joint 6.868000e-02

Joint ci ratio: 1.365295e-02	ci left: 5.747871e-01	ci right 5.827053e-01	k: 34725	n:60000
Cons ci ratio: 1.561817e-02	ci left: 5.081583e-01	ci right 5.161739e-01	k: 30730	n:60000
KS ci ratio: 1.132320e-01	ci left: 1.847336e-02	ci right 2.070678e-02	k: 1174	n:60000
CHD7   60000 perm   18 sec   (3375 perm/sec)   p_kst 1.956667e-02   p_cons 5.121667e-01   p_joint 5.787500e-01

Joint ci ratio: 4.978156e-02	ci left: 7.934217e-02	ci right 8.340690e-02	k: 5695	n:70000
Cons ci ratio: 1.447234e-02	ci left: 5.080180e-01	ci right 5.154381e-01	k: 35821	n:70000
KS ci ratio: 1.045928e-01	ci left: 1.864158e-02	ci right 2.071279e-02	k: 1376	n:70000
CHD7   70000 perm   21 sec   (3314 perm/sec)   p_kst 1.965714e-02   p_cons 5.117286e-01   p_joint 8.135714e-02

Joint ci ratio: 8.543994e-02	ci left: 2.454102e-02	ci right 2.674356e-02	k: 2050	n:80000
Cons ci ratio: 1.353472e-02	ci left: 5.083671e-01	ci right 5.153071e-01	k: 40947	n:80000
KS ci ratio: 9.798754e-02	ci left: 1.865062e-02	ci right 2.058444e-02	k: 1568	n:80000
CHD7   80000 perm   25 sec   (3264 perm/sec)   p_kst 1.960000e-02   p_cons 5.118375e-01   p_joint 2.562500e-02

Outputting figure to mutsig2_images.part000000000037/CHD7.2_9142_80000_0.0196_0.51184_0.025625.png
                gene_name: CHD7
               theta_stop: 0.098 
                    nperm: 80000 
                     p_ks: 0.020 
        ci_ks_bounds_left: 0.019 
       ci_ks_bounds_right: 0.021 
                   p_cons: 0.51 
      ci_cons_bounds_left: 0.51 
     ci_cons_bounds_right: 0.52 
                  p_joint: 0.026 
     ci_joint_bounds_left: 0.025 
    ci_joint_bounds_right: 0.027 

Current progress: 83 percent done.
CHD9
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.154075e-02	ci left: 9.148185e-01	ci right 9.255352e-01	k: 9203	n:10000
KS ci ratio: 2.135773e-02	ci left: 7.627374e-01	ci right 7.793044e-01	k: 7711	n:10000
CHD9   10000 perm   2 sec   (4133 perm/sec)   p_kst 7.711000e-01   p_cons 9.203000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000037/CHD9.2_8798_10000_0.7711_0.9203_1.png
                gene_name: CHD9
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.93 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000037
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 37 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1641>
Subject: Job 8704152: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1641>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000038> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:36:24 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000038.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000038.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 38  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000038.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    214.70 sec.
    Max Memory :      5988 MB
    Max Swap   :      8830 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
38
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 38
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 38: processing genes 3348 - 3438
Calculating significance of each gene.
Using projection method.
3348	CHRNA4	1
3349	CHRNA5	1.714569e-01
3350	CHRNA6	1
3351	CHRNA7	1
3352	CHRNA9	2.519024e-02
3353	CHRNB1	1
3354	CHRNB2	1
3355	CHRNB3	1
3356	CHRNB4	1
3357	CHRND	2.312432e-01
3358	CHRNE	1.689846e-01
3359	CHRNG	1
3360	CHST1	1
3361	CHST10	4.857305e-02
3362	CHST11	1
3363	CHST12	1
3364	CHST13	1
3365	CHST14	1
3366	CHST15	1
3367	CHST2	1.565403e-01
3368	CHST3	1
3369	CHST4	1
3370	CHST5	1.729063e-01
3371	CHST6	1
3372	CHST7	1
3373	CHST8	1.679953e-01
3374	CHST9	1
3375	CHSY1	1
In gene CHSY3 the following bins exceed PROBCAP:
    THCA-EM-A2CU-TP	categ 6	N = 2086    n = 1	mu =   1.08e-07
3376	CHSY3	1.282328e-01
3377	CHTF18	1
3378	CHTF8	1
3379	CHUK	1
3380	CHURC1	1
3381	CIAO1	1
3382	CIAPIN1	1
3383	CIB1	1
3384	CIB2	1
3385	CIB3	1
3386	CIB4	1
3387	CIC	1
3388	CIDEA	1.120620e-01
3389	CIDEB	1
3390	CIDEC	1
3391	CIITA	1
3392	CILP	1
3393	CILP2	1
3394	CINP	1
3395	CIR1	1
3396	CIRBP	1
3397	CIRH1A	3.558595e-03
3398	CISD1	1
3399	CISD2	1
3400	CISH	1
3401	CIT	2.535881e-01
3402	CITED1	1
3403	CITED2	1
3404	CIZ1	1
3405	CKAP2	1
3406	CKAP2L	2.063395e-01
3407	CKAP4	1
3408	CKAP5	1
3409	CKB	1
3410	CKLF	1
3411	CKM	1.725659e-01
3412	CKMT1A	1
3413	CKMT1B	1
3414	CKMT2	1
3415	CKS1B	1
3416	CKS2	1
3417	CLASP1	1
3418	CLASP2	1
3419	CLC	1
3420	CLCA1	1
3421	CLCA2	1
3422	CLCA4	1
3423	CLCC1	1
3424	CLCF1	1
3425	CLCN1	1
3426	CLCN2	1.040069e-01
3427	CLCN3	1.075053e-02
3428	CLCN4	1
3429	CLCN5	2.361573e-01
3430	CLCN6	2.348749e-01
3431	CLCN7	1
3432	CLCNKA	1
3433	CLCNKB	1
3434	CLDN1	1
3435	CLDN10	1
3436	CLDN11	1
3437	CLDN12	1
3438	CLDN14	1
Done

Running MutSig 2:
Scatter job 38: processing genes 3348 - 3438
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CIRH1A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.762719e-02	ci left: 6.587727e-01	ci right 6.773293e-01	k: 6681	n:10000
Cons ci ratio: 4.371700e-02	ci left: 4.358254e-01	ci right 4.554063e-01	k: 4456	n:10000
KS ci ratio: 4.247362e-02	ci left: 4.500946e-01	ci right 4.697287e-01	k: 4599	n:10000
CIRH1A   10000 perm   3 sec   (3178 perm/sec)   p_kst 4.599000e-01   p_cons 4.456000e-01   p_joint 6.681000e-01

Outputting figure to mutsig2_images.part000000000038/CIRH1A.3_2125_10000_0.4599_0.4456_0.6681.png
                gene_name: CIRH1A
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.67 
     ci_joint_bounds_left: 0.66 
    ci_joint_bounds_right: 0.68 

Current progress: 25 percent done.
CHRNA9
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.779532e-01	ci left: 1.678737e-02	ci right 2.229755e-02	k: 194	n:10000
Cons ci ratio: 1.509149e-01	ci left: 5.841227e-02	ci right 6.804410e-02	k: 631	n:10000
KS ci ratio: 8.064764e-02	ci left: 1.833364e-01	ci right 1.988440e-01	k: 1910	n:10000
CHRNA9   10000 perm   2 sec   (6269 perm/sec)   p_kst 1.910000e-01   p_cons 6.310000e-02   p_joint 1.940000e-02

Joint ci ratio: 1.487662e-01	ci left: 3.104924e-02	ci right 3.608756e-02	k: 670	n:20000
Cons ci ratio: 1.068055e-01	ci left: 5.972022e-02	ci right 6.650747e-02	k: 1261	n:20000
KS ci ratio: 5.766221e-02	ci left: 1.822597e-01	ci right 1.931313e-01	k: 3753	n:20000
CHRNA9   20000 perm   5 sec   (4444 perm/sec)   p_kst 1.876500e-01   p_cons 6.305000e-02   p_joint 3.350000e-02

Joint ci ratio: 1.355170e-01	ci left: 2.529183e-02	ci right 2.900051e-02	k: 813	n:30000
Cons ci ratio: 8.752818e-02	ci left: 5.991726e-02	ci right 6.543447e-02	k: 1879	n:30000
KS ci ratio: 4.717405e-02	ci left: 1.826677e-01	ci right 1.915263e-01	k: 5612	n:30000
CHRNA9   30000 perm   7 sec   (4583 perm/sec)   p_kst 1.870667e-01   p_cons 6.263333e-02   p_joint 2.710000e-02

Joint ci ratio: 1.165002e-01	ci left: 2.591926e-02	ci right 2.914982e-02	k: 1100	n:40000
Cons ci ratio: 7.679823e-02	ci left: 5.879678e-02	ci right 6.351717e-02	k: 2445	n:40000
KS ci ratio: 4.076359e-02	ci left: 1.839333e-01	ci right 1.916121e-01	k: 7510	n:40000
CHRNA9   40000 perm   9 sec   (4613 perm/sec)   p_kst 1.877500e-01   p_cons 6.112500e-02   p_joint 2.750000e-02

Joint ci ratio: 1.053179e-01	ci left: 2.553835e-02	ci right 2.839692e-02	k: 1347	n:50000
Cons ci ratio: 6.908249e-02	ci left: 5.840616e-02	ci right 6.260505e-02	k: 3024	n:50000
KS ci ratio: 3.644996e-02	ci left: 1.844246e-01	ci right 1.912916e-01	k: 9392	n:50000
CHRNA9   50000 perm   11 sec   (4606 perm/sec)   p_kst 1.878400e-01   p_cons 6.048000e-02   p_joint 2.694000e-02

Joint ci ratio: 8.761773e-02	ci left: 3.086706e-02	ci right 3.371174e-02	k: 1936	n:60000
Cons ci ratio: 6.308199e-02	ci left: 5.855605e-02	ci right 6.238660e-02	k: 3627	n:60000
KS ci ratio: 3.344891e-02	ci left: 1.831418e-01	ci right 1.893885e-01	k: 11175	n:60000
CHRNA9   60000 perm   13 sec   (4567 perm/sec)   p_kst 1.862500e-01   p_cons 6.045000e-02   p_joint 3.226667e-02

Outputting figure to mutsig2_images.part000000000038/CHRNA9.2_1460_60000_0.18625_0.06045_0.032267.png
                gene_name: CHRNA9
               theta_stop: 0.088 
                    nperm: 60000 
                     p_ks: 0.19 
        ci_ks_bounds_left: 0.18 
       ci_ks_bounds_right: 0.19 
                   p_cons: 0.060 
      ci_cons_bounds_left: 0.059 
     ci_cons_bounds_right: 0.062 
                  p_joint: 0.032 
     ci_joint_bounds_left: 0.031 
    ci_joint_bounds_right: 0.034 

Current progress: 50 percent done.
CIT
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.046551e-02	ci left: 1.840255e-01	ci right 1.995545e-01	k: 1917	n:10000
Cons ci ratio: 1.549534e-02	ci left: 8.580439e-01	ci right 8.715428e-01	k: 8649	n:10000
KS ci ratio: 1.035678e-01	ci left: 1.187734e-01	ci right 1.318457e-01	k: 1252	n:10000
CIT   10000 perm   2 sec   (4712 perm/sec)   p_kst 1.252000e-01   p_cons 8.649000e-01   p_joint 1.917000e-01

Joint ci ratio: 5.085277e-02	ci left: 2.231913e-01	ci right 2.348876e-01	k: 4580	n:20000
Cons ci ratio: 1.095129e-02	ci left: 8.601860e-01	ci right 8.697077e-01	k: 17300	n:20000
KS ci ratio: 7.338550e-02	ci left: 1.202495e-01	ci right 1.294599e-01	k: 2496	n:20000
CIT   20000 perm   5 sec   (4252 perm/sec)   p_kst 1.248000e-01   p_cons 8.650000e-01   p_joint 2.290000e-01

Outputting figure to mutsig2_images.part000000000038/CIT.2_6268_20000_0.1248_0.865_0.229.png
                gene_name: CIT
               theta_stop: 0.073 
                    nperm: 20000 
                     p_ks: 0.12 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.87 
                  p_joint: 0.23 
     ci_joint_bounds_left: 0.22 
    ci_joint_bounds_right: 0.23 

Current progress: 75 percent done.
CLCN3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.532580e-01	ci left: 5.667674e-02	ci right 6.618073e-02	k: 613	n:10000
Cons ci ratio: 1.013601e-01	ci left: 1.234670e-01	ci right 1.367493e-01	k: 1300	n:10000
KS ci ratio: 6.894319e-02	ci left: 2.358052e-01	ci right 2.527440e-01	k: 2442	n:10000
CLCN3   10000 perm   2 sec   (5885 perm/sec)   p_kst 2.442000e-01   p_cons 1.300000e-01   p_joint 6.130000e-02

Joint ci ratio: 1.082314e-01	ci left: 5.820936e-02	ci right 6.491880e-02	k: 1230	n:20000
Cons ci ratio: 7.123371e-02	ci left: 1.267960e-01	ci right 1.362115e-01	k: 2629	n:20000
KS ci ratio: 4.813153e-02	ci left: 2.430187e-01	ci right 2.550543e-01	k: 4980	n:20000
CLCN3   20000 perm   4 sec   (5235 perm/sec)   p_kst 2.490000e-01   p_cons 1.314500e-01   p_joint 6.150000e-02

Joint ci ratio: 8.823125e-02	ci left: 5.900317e-02	ci right 6.448208e-02	k: 1851	n:30000
Cons ci ratio: 5.846138e-02	ci left: 1.265100e-01	ci right 1.341618e-01	k: 3909	n:30000
KS ci ratio: 3.943463e-02	ci left: 2.428563e-01	ci right 2.526593e-01	k: 7432	n:30000
CLCN3   30000 perm   6 sec   (4987 perm/sec)   p_kst 2.477333e-01   p_cons 1.303000e-01   p_joint 6.170000e-02

Outputting figure to mutsig2_images.part000000000038/CLCN3.2_2653_30000_0.24773_0.1303_0.0617.png
                gene_name: CLCN3
               theta_stop: 0.088 
                    nperm: 30000 
                     p_ks: 0.25 
        ci_ks_bounds_left: 0.24 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.13 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.13 
                  p_joint: 0.062 
     ci_joint_bounds_left: 0.059 
    ci_joint_bounds_right: 0.064 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000038
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 38 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1647>
Subject: Job 8704154: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1647>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000039> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:25 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000039.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000039.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 39  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000039.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    141.37 sec.
    Max Memory :      5518 MB
    Max Swap   :      8412 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
39
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 39
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 39: processing genes 3439 - 3528
Calculating significance of each gene.
Using projection method.
3439	CLDN15	1
3440	CLDN16	1
3441	CLDN17	1
3442	CLDN18	1
3443	CLDN19	1
3444	CLDN2	1
3445	CLDN20	1
3446	CLDN22	1
3447	CLDN23	1
3448	CLDN25	1
3449	CLDN3	1
3450	CLDN4	1
3451	CLDN5	1
3452	CLDN6	1.117146e-01
3453	CLDN7	1
3454	CLDN8	1
3455	CLDN9	1
3456	CLDND1	1
3457	CLDND2	1
3458	CLEC10A	1
3459	CLEC11A	1
3460	CLEC12A	1
3461	CLEC12B	1
3462	CLEC14A	1.519399e-01
3463	CLEC16A	1
3464	CLEC17A	1
3465	CLEC18A	1
3466	CLEC18B	1
3467	CLEC18C	1
3468	CLEC1A	1
3469	CLEC1B	1
3470	CLEC2B	1
3471	CLEC2D	1
3472	CLEC2L	1
3473	CLEC3A	1
3474	CLEC3B	1
3475	CLEC4A	1
3476	CLEC4C	1
3477	CLEC4D	1
3478	CLEC4E	1
3479	CLEC4F	1
3480	CLEC4G	1
3481	CLEC4M	1
3482	CLEC5A	1
3483	CLEC6A	1
3484	CLEC7A	1
3485	CLEC9A	1
3486	CLECL1	1
3487	CLGN	1
3488	CLIC1	1
3489	CLIC2	1
3490	CLIC3	1
3491	CLIC4	1
3492	CLIC5	3.430404e-02
3493	CLIC6	4.418335e-02
3494	CLINT1	1
3495	CLIP1	4.916053e-01
3496	CLIP2	3.194604e-01
3497	CLIP3	6.298760e-02
3498	CLIP4	1
3499	CLK1	2.073726e-01
3500	CLK2	1
3501	CLK3	1
3502	CLK4	1
3503	CLLU1	1
3504	CLLU1OS	1
3505	CLMN	1
3506	CLN3	1
3507	CLN5	1
3508	CLN6	1
3509	CLN8	1
3510	CLNK	1
3511	CLNS1A	5.148041e-02
3512	CLOCK	1
3513	CLP1	1
3514	CLPB	1
3515	CLPP	1
3516	CLPS	1
3517	CLPTM1	1
3518	CLPTM1L	1
3519	CLPX	1
3520	CLRN1	1
3521	CLRN2	1
3522	CLRN3	7.543783e-02
3523	CLSPN	1
3524	CLSTN1	1
3525	CLSTN2	1
3526	CLSTN3	1
3527	CLTA	1
3528	CLTB	1
Done

Running MutSig 2:
Scatter job 39: processing genes 3439 - 3528
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000039
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 39 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1713>
Subject: Job 8704156: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1713>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000040> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:54 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000040.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000040.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 40  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000040.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    182.69 sec.
    Max Memory :      5922 MB
    Max Swap   :      8427 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
40
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 40
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 40: processing genes 3529 - 3619
Calculating significance of each gene.
Using projection method.
3529	CLTC	1
3530	CLTCL1	9.325751e-02
3531	CLU	1
3532	CLUAP1	1
3533	CLUL1	1
3534	CLVS1	1
3535	CLVS2	1
3536	CLYBL	1
3537	CMA1	9.849271e-02
3538	CMAS	1
3539	CMBL	1
3540	CMC1	1
3541	CMIP	1
3542	CMKLR1	1
3543	CMPK1	1
3544	CMPK2	1
3545	CMTM1	1
3546	CMTM2	1
3547	CMTM3	1
3548	CMTM4	1
3549	CMTM5	1
3550	CMTM6	1
3551	CMTM7	1
3552	CMTM8	1
3553	CMYA5	1
3554	CNBD1	1
3555	CNBP	1
3556	CNDP1	1
3557	CNDP2	1
3558	CNFN	1
3559	CNGA1	2.238296e-01
3560	CNGA2	1.141813e-01
3561	CNGA3	1
3562	CNGA4	1.638846e-01
3563	CNGB1	1.920258e-02
3564	CNGB3	3.099727e-01
3565	CNIH	1
3566	CNIH2	7.382721e-02
3567	CNIH3	1
3568	CNIH4	1
3569	CNKSR1	2.818892e-01
3570	CNKSR2	1
3571	CNKSR3	1
3572	CNN1	1
In gene CNN2 the following bins exceed PROBCAP:
    THCA-EL-A3CL-TP	categ 6	N = 888     n = 1	mu =   1.03e-07
3573	CNN2	4.559512e-02
3574	CNN3	1
3575	CNNM1	2.999855e-02
3576	CNNM2	1
3577	CNNM3	1
3578	CNNM4	2.108959e-01
3579	CNO	1
3580	CNOT1	4.229471e-01
3581	CNOT10	1
3582	CNOT2	1
3583	CNOT3	3.225550e-01
3584	CNOT4	1
3585	CNOT6	1.824188e-01
3586	CNOT6L	1
3587	CNOT7	1.233816e-01
3588	CNOT8	1
3589	CNP	1
3590	CNPY1	1
3591	CNPY2	1
3592	CNPY3	1
3593	CNPY4	2.761114e-03
3594	CNR1	5.132799e-02
3595	CNR2	1.398335e-02
3596	CNRIP1	5.174220e-02
3597	CNST	1
3598	CNTD1	1
3599	CNTD2	1
3600	CNTF	8.464489e-02
3601	CNTFR	1
3602	CNTLN	4.294792e-02
3603	CNTN1	1
3604	CNTN2	1
3605	CNTN3	1.172264e-01
3606	CNTN4	1
3607	CNTN5	1
3608	CNTN6	1
In gene CNTNAP1 the following bins exceed PROBCAP:
    THCA-DJ-A2Q2-TP	categ 6	N = 4178    n = 1	mu =   1.04e-07
3609	CNTNAP1	2.741437e-01
3610	CNTNAP2	1
3611	CNTNAP3	1.564997e-01
3612	CNTNAP4	1
3613	CNTNAP5	1
3614	CNTROB	1
3615	COASY	1
3616	COBL	1
3617	COBLL1	1
3618	COBRA1	1
3619	COCH	1
Done

Running MutSig 2:
Scatter job 40: processing genes 3529 - 3619
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CNGB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.575492e-02	ci left: 5.359792e-01	ci right 5.555941e-01	k: 5458	n:10000
Cons ci ratio: 6.981304e-02	ci left: 2.312609e-01	ci right 2.480910e-01	k: 2396	n:10000
KS ci ratio: 2.363978e-02	ci left: 7.245152e-01	ci right 7.419487e-01	k: 7333	n:10000
CNGB1   10000 perm   2 sec   (4819 perm/sec)   p_kst 7.333000e-01   p_cons 2.396000e-01   p_joint 5.458000e-01

Outputting figure to mutsig2_images.part000000000040/CNGB1.3_3914_10000_0.7333_0.2396_0.5458.png
                gene_name: CNGB1
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.73 
        ci_ks_bounds_left: 0.72 
       ci_ks_bounds_right: 0.74 
                   p_cons: 0.24 
      ci_cons_bounds_left: 0.23 
     ci_cons_bounds_right: 0.25 
                  p_joint: 0.55 
     ci_joint_bounds_left: 0.54 
    ci_joint_bounds_right: 0.56 

Current progress: 17 percent done.
CLTCL1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.540393e-02	ci left: 3.242591e-01	ci right 3.428380e-01	k: 3335	n:10000
Cons ci ratio: 1.840208e-03	ci left: 9.967917e-01	ci right 9.986996e-01	k: 9979	n:10000
KS ci ratio: 6.952695e-02	ci left: 2.327426e-01	ci right 2.496084e-01	k: 2411	n:10000
CLTCL1   10000 perm   2 sec   (4884 perm/sec)   p_kst 2.411000e-01   p_cons 9.979000e-01   p_joint 3.335000e-01

Outputting figure to mutsig2_images.part000000000040/CLTCL1.2_5051_10000_0.2411_0.9979_0.3335.png
                gene_name: CLTCL1
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.33 
     ci_joint_bounds_left: 0.32 
    ci_joint_bounds_right: 0.34 

Current progress: 33 percent done.
CNNM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.774561e-02	ci left: 6.568600e-01	ci right 6.754431e-01	k: 6662	n:10000
Cons ci ratio: 1.522255e-02	ci left: 8.622295e-01	ci right 8.755548e-01	k: 8690	n:10000
KS ci ratio: 4.332986e-02	ci left: 4.402151e-01	ci right 4.598141e-01	k: 4500	n:10000
CNNM1   10000 perm   2 sec   (5631 perm/sec)   p_kst 4.500000e-01   p_cons 8.690000e-01   p_joint 6.662000e-01

Outputting figure to mutsig2_images.part000000000040/CNNM1.2_2900_10000_0.45_0.869_0.6662.png
                gene_name: CNNM1
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.45 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.46 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.88 
                  p_joint: 0.67 
     ci_joint_bounds_left: 0.66 
    ci_joint_bounds_right: 0.68 

Current progress: 50 percent done.
CNPY4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.354916e-02	ci left: 7.260304e-01	ci right 7.434327e-01	k: 7348	n:10000
KS ci ratio: 1.728785e-02	ci left: 8.298162e-01	ci right 8.443869e-01	k: 8372	n:10000
CNPY4   10000 perm   1 sec   (6696 perm/sec)   p_kst 8.372000e-01   p_cons 7.348000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000040/CNPY4.2_771_10000_0.8372_0.7348_1.png
                gene_name: CNPY4
               theta_stop: 0.024 
                    nperm: 10000 
                     p_ks: 0.84 
        ci_ks_bounds_left: 0.83 
       ci_ks_bounds_right: 0.84 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.74 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
CNR2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.946732e-02	ci left: 1.878651e-01	ci right 2.035126e-01	k: 1956	n:10000
Cons ci ratio: 1.497797e-01	ci left: 5.928045e-02	ci right 6.897537e-02	k: 640	n:10000
KS ci ratio: 1.533594e-02	ci left: 8.604938e-01	ci right 8.738915e-01	k: 8673	n:10000
CNR2   10000 perm   1 sec   (6784 perm/sec)   p_kst 8.673000e-01   p_cons 6.400000e-02   p_joint 1.956000e-01

Joint ci ratio: 4.598536e-02	ci left: 2.603322e-01	ci right 2.726358e-01	k: 5329	n:20000
Cons ci ratio: 1.058684e-01	ci left: 6.074404e-02	ci right 6.758334e-02	k: 1282	n:20000
KS ci ratio: 1.068729e-02	ci left: 8.658694e-01	ci right 8.752226e-01	k: 17412	n:20000
CNR2   20000 perm   3 sec   (5979 perm/sec)   p_kst 8.706000e-01   p_cons 6.410000e-02   p_joint 2.664500e-01

Joint ci ratio: 4.313446e-02	ci left: 2.111890e-01	ci right 2.205327e-01	k: 6475	n:30000
Cons ci ratio: 8.659821e-02	ci left: 6.115809e-02	ci right 6.672672e-02	k: 1917	n:30000
KS ci ratio: 8.769707e-03	ci left: 8.656020e-01	ci right 8.732596e-01	k: 26084	n:30000
CNR2   30000 perm   5 sec   (5625 perm/sec)   p_kst 8.694667e-01   p_cons 6.390000e-02   p_joint 2.158333e-01

Outputting figure to mutsig2_images.part000000000040/CNR2.2_1087_30000_0.86947_0.0639_0.21583.png
                gene_name: CNR2
               theta_stop: 0.087 
                    nperm: 30000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.87 
                   p_cons: 0.064 
      ci_cons_bounds_left: 0.061 
     ci_cons_bounds_right: 0.067 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.22 

Current progress: 83 percent done.
CNTLN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.007874e-02	ci left: 2.895409e-01	ci right 3.075765e-01	k: 2985	n:10000
KS ci ratio: 2.608933e-02	ci left: 6.838544e-01	ci right 7.020331e-01	k: 6930	n:10000
CNTLN   10000 perm   2 sec   (4883 perm/sec)   p_kst 6.930000e-01   p_cons 2.985000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000040/CNTLN.2_4355_10000_0.693_0.2985_1.png
                gene_name: CNTLN
               theta_stop: 0.060 
                    nperm: 10000 
                     p_ks: 0.69 
        ci_ks_bounds_left: 0.68 
       ci_ks_bounds_right: 0.70 
                   p_cons: 0.30 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.31 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000040
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 40 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1649>
Subject: Job 8704157: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1649>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000041> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:35:40 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000041.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000041.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 41  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000041.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    224.44 sec.
    Max Memory :      6116 MB
    Max Swap   :      8543 MB

    Max Processes  :         7
    Max Threads    :        60

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
41
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 41
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 41: processing genes 3620 - 3709
Calculating significance of each gene.
Using projection method.
3620	COG1	1
3621	COG2	1
3622	COG3	1
3623	COG4	1
3624	COG5	1
3625	COG6	1
3626	COG7	1.489087e-01
3627	COG8	2.226073e-02
3628	COIL	1.035515e-01
3629	COL10A1	1
3630	COL11A1	2.029908e-01
3631	COL11A2	3.326785e-01
3632	COL12A1	6.821507e-01
3633	COL13A1	1
3634	COL14A1	4.325085e-01
3635	COL15A1	1
3636	COL16A1	1
3637	COL17A1	1
3638	COL18A1	1
3639	COL19A1	3.301452e-01
3640	COL1A1	3.539002e-01
3641	COL1A2	1
3642	COL20A1	9.254586e-03
3643	COL21A1	1
3644	COL22A1	1
3645	COL23A1	1
3646	COL24A1	3.234127e-01
3647	COL25A1	1.063024e-01
3648	COL27A1	4.185603e-01
3649	COL28A1	1
3650	COL2A1	3.709988e-01
3651	COL3A1	4.687515e-01
3652	COL4A1	5.135207e-02
3653	COL4A2	1.102169e-01
3654	COL4A3	3.042490e-01
3655	COL4A3BP	1
3656	COL4A4	4.033607e-02
3657	COL4A5	2.115905e-01
3658	COL4A6	4.227562e-01
3659	COL5A1	1.924323e-01
3660	COL5A2	1.959349e-01
In gene COL5A3 the following bins exceed PROBCAP:
    THCA-ET-A3BO-TP	categ 6	N = 4645    n = 1	mu =   1.40e-07
    THCA-FY-A3R6-TP	categ 6	N = 5075    n = 1	mu =   1.67e-07
3661	COL5A3	5.019263e-05
3662	COL6A1	1
3663	COL6A2	2.691249e-02
3664	COL6A3	4.800818e-01
3665	COL6A5	1
3666	COL6A6	3.072718e-01
3667	COL7A1	1
3668	COL8A1	1
3669	COL8A2	1
3670	COL9A1	3.013239e-01
3671	COL9A2	2.020991e-01
3672	COL9A3	1
3673	COLEC10	1
3674	COLEC11	1.496437e-01
3675	COLEC12	1
3676	COLQ	1
3677	COMMD1	1
3678	COMMD10	1
3679	COMMD2	1
3680	COMMD3	1
3681	COMMD4	1
3682	COMMD5	1
3683	COMMD6	1
3684	COMMD7	1
3685	COMMD8	1
3686	COMMD9	1
3687	COMP	1
3688	COMT	1
3689	COMTD1	7.244677e-03
3690	COPA	1
3691	COPB1	1
3692	COPB2	1
3693	COPE	1
3694	COPG	1
3695	COPG2	1
3696	COPS2	1
3697	COPS3	1
3698	COPS4	1
3699	COPS5	1
3700	COPS6	1
3701	COPS7A	1
3702	COPS7B	1
3703	COPS8	1
3704	COPZ1	1
3705	COPZ2	1
3706	COQ10A	8.350283e-02
3707	COQ10B	1
3708	COQ2	1
3709	COQ3	1
Done

Running MutSig 2:
Scatter job 41: processing genes 3620 - 3709
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
COL5A3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.881196e-02	ci left: 4.950504e-01	ci right 5.147467e-01	k: 5049	n:10000
Cons ci ratio: 5.972766e-03	ci left: 9.742942e-01	ci right 9.802233e-01	k: 9774	n:10000
KS ci ratio: 5.303562e-02	ci left: 3.438259e-01	ci right 3.626596e-01	k: 3532	n:10000
COL5A3   10000 perm   3 sec   (3872 perm/sec)   p_kst 3.532000e-01   p_cons 9.774000e-01   p_joint 5.049000e-01

Outputting figure to mutsig2_images.part000000000041/COL5A3.6_5506_10000_0.3532_0.9774_0.5049.png
                gene_name: COL5A3
               theta_stop: 0.053 
                    nperm: 10000 
                     p_ks: 0.35 
        ci_ks_bounds_left: 0.34 
       ci_ks_bounds_right: 0.36 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.51 

Current progress: 10 percent done.
COL20A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.194552e-02	ci left: 1.466828e-01	ci right 1.609195e-01	k: 1537	n:10000
Cons ci ratio: 4.538307e-02	ci left: 4.174770e-01	ci right 4.369654e-01	k: 4272	n:10000
KS ci ratio: 1.177263e-01	ci left: 9.389515e-02	ci right 1.057391e-01	k: 997	n:10000
COL20A1   10000 perm   3 sec   (3546 perm/sec)   p_kst 9.970000e-02   p_cons 4.272000e-01   p_joint 1.537000e-01

Joint ci ratio: 5.963629e-02	ci left: 1.723256e-01	ci right 1.829683e-01	k: 3552	n:20000
Cons ci ratio: 3.181968e-02	ci left: 4.245214e-01	ci right 4.382985e-01	k: 8628	n:20000
KS ci ratio: 8.442632e-02	ci left: 9.317735e-02	ci right 1.014401e-01	k: 1945	n:20000
COL20A1   20000 perm   6 sec   (3161 perm/sec)   p_kst 9.725000e-02   p_cons 4.314000e-01   p_joint 1.776000e-01

Outputting figure to mutsig2_images.part000000000041/COL20A1.3_3933_20000_0.09725_0.4314_0.1776.png
                gene_name: COL20A1
               theta_stop: 0.084 
                    nperm: 20000 
                     p_ks: 0.097 
        ci_ks_bounds_left: 0.093 
       ci_ks_bounds_right: 0.10 
                   p_cons: 0.43 
      ci_cons_bounds_left: 0.42 
     ci_cons_bounds_right: 0.44 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.17 
    ci_joint_bounds_right: 0.18 

Current progress: 20 percent done.
COL4A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.776877e-02	ci left: 2.421299e-01	ci right 2.592155e-01	k: 2506	n:10000
Cons ci ratio: 5.540393e-02	ci left: 3.242591e-01	ci right 3.428380e-01	k: 3335	n:10000
KS ci ratio: 7.323371e-02	ci left: 2.144784e-01	ci right 2.308835e-01	k: 2226	n:10000
COL4A1   10000 perm   2 sec   (4674 perm/sec)   p_kst 2.226000e-01   p_cons 3.335000e-01   p_joint 2.506000e-01

Outputting figure to mutsig2_images.part000000000041/COL4A1.3_5218_10000_0.2226_0.3335_0.2506.png
                gene_name: COL4A1
               theta_stop: 0.073 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.33 
      ci_cons_bounds_left: 0.32 
     ci_cons_bounds_right: 0.34 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.26 

Current progress: 30 percent done.
COL4A4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.823030e-02	ci left: 8.145627e-01	ci right 8.296492e-01	k: 8222	n:10000
Cons ci ratio: 1.910346e-02	ci left: 8.002425e-01	ci right 8.157777e-01	k: 8081	n:10000
KS ci ratio: 4.108949e-02	ci left: 4.665692e-01	ci right 4.862446e-01	k: 4764	n:10000
COL4A4   10000 perm   2 sec   (4803 perm/sec)   p_kst 4.764000e-01   p_cons 8.081000e-01   p_joint 8.222000e-01

Outputting figure to mutsig2_images.part000000000041/COL4A4.3_5261_10000_0.4764_0.8081_0.8222.png
                gene_name: COL4A4
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.47 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.81 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.82 
                  p_joint: 0.82 
     ci_joint_bounds_left: 0.81 
    ci_joint_bounds_right: 0.83 

Current progress: 40 percent done.
COL5A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.648225e-02	ci left: 8.426459e-01	ci right 8.567497e-01	k: 8498	n:10000
Cons ci ratio: 3.137362e-02	ci left: 5.998573e-01	ci right 6.190789e-01	k: 6095	n:10000
KS ci ratio: 2.999325e-02	ci left: 6.211539e-01	ci right 6.401699e-01	k: 6307	n:10000
COL5A1   10000 perm   3 sec   (3965 perm/sec)   p_kst 6.307000e-01   p_cons 6.095000e-01   p_joint 8.498000e-01

Outputting figure to mutsig2_images.part000000000041/COL5A1.3_5781_10000_0.6307_0.6095_0.8498.png
                gene_name: COL5A1
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.63 
        ci_ks_bounds_left: 0.62 
       ci_ks_bounds_right: 0.64 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 0.85 
     ci_joint_bounds_left: 0.84 
    ci_joint_bounds_right: 0.86 

Current progress: 50 percent done.
COL6A2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.722914e-02	ci left: 5.158568e-01	ci right 5.355282e-01	k: 5257	n:10000
Cons ci ratio: 7.029523e-02	ci left: 2.287917e-01	ci right 2.455617e-01	k: 2371	n:10000
KS ci ratio: 1.261589e-02	ci left: 9.003168e-01	ci right 9.118454e-01	k: 9062	n:10000
COL6A2   10000 perm   2 sec   (5366 perm/sec)   p_kst 9.062000e-01   p_cons 2.371000e-01   p_joint 5.257000e-01

Outputting figure to mutsig2_images.part000000000041/COL6A2.3_3498_10000_0.9062_0.2371_0.5257.png
                gene_name: COL6A2
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.90 
       ci_ks_bounds_right: 0.91 
                   p_cons: 0.24 
      ci_cons_bounds_left: 0.23 
     ci_cons_bounds_right: 0.25 
                  p_joint: 0.53 
     ci_joint_bounds_left: 0.52 
    ci_joint_bounds_right: 0.54 

Current progress: 60 percent done.
COG8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.798932e-02	ci left: 1.582644e-01	ci right 1.729310e-01	k: 1655	n:10000
Cons ci ratio: 8.582440e-02	ci left: 1.651411e-01	ci right 1.800501e-01	k: 1725	n:10000
KS ci ratio: 1.036624e-01	ci left: 1.185779e-01	ci right 1.316413e-01	k: 1250	n:10000
COG8   10000 perm   2 sec   (6047 perm/sec)   p_kst 1.250000e-01   p_cons 1.725000e-01   p_joint 1.655000e-01

Joint ci ratio: 2.576731e-02	ci left: 5.294590e-01	ci right 5.433304e-01	k: 10728	n:20000
Cons ci ratio: 5.792832e-02	ci left: 1.808755e-01	ci right 1.917159e-01	k: 3725	n:20000
KS ci ratio: 7.406493e-02	ci left: 1.182814e-01	ci right 1.274285e-01	k: 2456	n:20000
COG8   20000 perm   4 sec   (5090 perm/sec)   p_kst 1.228000e-01   p_cons 1.862500e-01   p_joint 5.364000e-01

Outputting figure to mutsig2_images.part000000000041/COG8.2_1859_20000_0.1228_0.18625_0.5364.png
                gene_name: COG8
               theta_stop: 0.074 
                    nperm: 20000 
                     p_ks: 0.12 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.54 
     ci_joint_bounds_left: 0.53 
    ci_joint_bounds_right: 0.54 

Current progress: 70 percent done.
COL11A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.386890e-02	ci left: 8.824747e-01	ci right 8.948979e-01	k: 8888	n:10000
KS ci ratio: 1.211278e-02	ci left: 9.072023e-01	ci right 9.183559e-01	k: 9129	n:10000
COL11A1   10000 perm   2 sec   (4570 perm/sec)   p_kst 9.129000e-01   p_cons 8.888000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000041/COL11A1.2_5846_10000_0.9129_0.8888_1.png
                gene_name: COL11A1
               theta_stop: 0.014 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 80 percent done.
COL4A2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.852375e-02	ci left: 3.005450e-01	ci right 3.187660e-01	k: 3096	n:10000
KS ci ratio: 1.139078e-02	ci left: 9.167762e-01	ci right 9.273764e-01	k: 9222	n:10000
COL4A2   10000 perm   2 sec   (4892 perm/sec)   p_kst 9.222000e-01   p_cons 3.096000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000041/COL4A2.2_5327_10000_0.9222_0.3096_1.png
                gene_name: COL4A2
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.92 
        ci_ks_bounds_left: 0.92 
       ci_ks_bounds_right: 0.93 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.30 
     ci_cons_bounds_right: 0.32 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 90 percent done.
COL6A3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.749929e-02	ci left: 2.436126e-01	ci right 2.607320e-01	k: 2521	n:10000
Cons ci ratio: 1.186767e-02	ci left: 9.104942e-01	ci right 9.214620e-01	k: 9161	n:10000
KS ci ratio: 2.232741e-01	ci left: 2.655489e-02	ci right 3.332262e-02	k: 298	n:10000
COL6A3   10000 perm   3 sec   (3655 perm/sec)   p_kst 2.980000e-02   p_cons 9.161000e-01   p_joint 2.521000e-01

Joint ci ratio: 4.250761e-02	ci left: 2.919640e-01	ci right 3.046947e-01	k: 5966	n:20000
Cons ci ratio: 8.425477e-03	ci left: 9.115086e-01	ci right 9.192701e-01	k: 18309	n:20000
KS ci ratio: 1.602456e-01	ci left: 2.671804e-02	ci right 3.142021e-02	k: 580	n:20000
COL6A3   20000 perm   6 sec   (3124 perm/sec)   p_kst 2.900000e-02   p_cons 9.154500e-01   p_joint 2.983000e-01

Joint ci ratio: 3.354540e-02	ci left: 3.075221e-01	ci right 3.180475e-01	k: 9383	n:30000
Cons ci ratio: 6.966663e-03	ci left: 9.102284e-01	ci right 9.166246e-01	k: 27404	n:30000
KS ci ratio: 1.289855e-01	ci left: 2.793717e-02	ci right 3.182125e-02	k: 895	n:30000
COL6A3   30000 perm   11 sec   (2756 perm/sec)   p_kst 2.983333e-02   p_cons 9.134667e-01   p_joint 3.127667e-01

Joint ci ratio: 3.099133e-02	ci left: 2.812513e-01	ci right 2.901299e-01	k: 11427	n:40000
Cons ci ratio: 6.003185e-03	ci left: 9.114634e-01	ci right 9.169763e-01	k: 36570	n:40000
KS ci ratio: 1.111628e-01	ci left: 2.847158e-02	ci right 3.184708e-02	k: 1205	n:40000
COL6A3   40000 perm   14 sec   (2825 perm/sec)   p_kst 3.012500e-02   p_cons 9.142500e-01   p_joint 2.856750e-01

Joint ci ratio: 2.869608e-02	ci left: 2.678640e-01	ci right 2.756825e-01	k: 13588	n:50000
Cons ci ratio: 5.357319e-03	ci left: 9.121162e-01	ci right 9.170356e-01	k: 45730	n:50000
KS ci ratio: 9.992388e-02	ci left: 2.836598e-02	ci right 3.136893e-02	k: 1492	n:50000
COL6A3   50000 perm   17 sec   (2869 perm/sec)   p_kst 2.984000e-02   p_cons 9.146000e-01   p_joint 2.717600e-01

Outputting figure to mutsig2_images.part000000000041/COL6A3.2_9753_50000_0.02984_0.9146_0.27176.png
                gene_name: COL6A3
               theta_stop: 0.100 
                    nperm: 50000 
                     p_ks: 0.030 
        ci_ks_bounds_left: 0.028 
       ci_ks_bounds_right: 0.031 
                   p_cons: 0.91 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.92 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.27 
    ci_joint_bounds_right: 0.28 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000041
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 41 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1646>
Subject: Job 8704158: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1646>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000042> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 20:19:18 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000042.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000042.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 42  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000042.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   2840.26 sec.
    Max Memory :      5746 MB
    Max Swap   :      8521 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
42
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 42
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 42: processing genes 3710 - 3800
Calculating significance of each gene.
Using projection method.
3710	COQ4	1
3711	COQ5	1
3712	COQ6	1
3713	COQ7	1
3714	COQ9	1
3715	CORIN	3.110086e-01
3716	CORO1A	1
3717	CORO1B	4.228934e-03
3718	CORO1C	1
3719	CORO2A	1
3720	CORO2B	1
3721	CORO6	1
3722	CORO7	2.865845e-01
3723	CORT	1
3724	COTL1	1
3725	COX10	1
3726	COX11	1
3727	COX15	1
3728	COX16	1
3729	COX17	1
3730	COX18	1
3731	COX19	1
3732	COX4I1	1
3733	COX4I2	1
3734	COX4NB	1
3735	COX5A	1
3736	COX5B	1
3737	COX6A1	1
3738	COX6A2	1
3739	COX6B1	1
3740	COX6B2	1
3741	COX6C	1
3742	COX7A1	1
3743	COX7A2	1
3744	COX7A2L	1
3745	COX7B	2.660584e-02
3746	COX7B2	1
3747	COX7C	1
3748	COX8A	1
3749	COX8C	1
3750	CP	1
3751	CP110	1
3752	CPA1	1
3753	CPA2	1
3754	CPA3	1
3755	CPA4	1
3756	CPA5	1
3757	CPA6	1
3758	CPAMD8	1
3759	CPB1	1
3760	CPB2	1
3761	CPD	1
3762	CPE	1.342906e-02
3763	CPEB1	1
3764	CPEB2	1
3765	CPEB3	5.211181e-02
3766	CPEB4	1
3767	CPLX1	1
3768	CPLX2	1
3769	CPLX3	1
3770	CPLX4	1
3771	CPM	1
3772	CPN1	1
3773	CPN2	1
3774	CPNE1	5.256271e-02
3775	CPNE2	1
3776	CPNE3	1
3777	CPNE4	1
3778	CPNE5	2.184675e-01
3779	CPNE6	1
3780	CPNE7	1
3781	CPNE8	1
3782	CPNE9	1
3783	CPO	1
3784	CPOX	1.624299e-01
3785	CPPED1	1
3786	CPS1	4.855214e-01
3787	CPSF1	1
3788	CPSF2	1
3789	CPSF3	1.009023e-01
3790	CPSF3L	1
3791	CPSF4	1
3792	CPSF6	1.253585e-01
3793	CPSF7	1
3794	CPT1A	1
3795	CPT1B	1
3796	CPT1C	3.500526e-01
3797	CPT2	1
3798	CPVL	1
3799	CPXCR1	1
3800	CPXM1	1
Done

Running MutSig 2:
Scatter job 42: processing genes 3710 - 3800
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CORO1B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
Cons ci ratio: 7.595156e-03	ci left: 9.600562e-01	ci right 9.674704e-01	k: 9639	n:10000
KS ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
CORO1B   10000 perm   2 sec   (4348 perm/sec)   p_kst 5.000000e-04   p_cons 9.639000e-01   p_joint 5.000000e-04

Joint ci ratio: 1.131239e+00	ci left: 2.745890e-04	ci right 9.838883e-04	k: 11	n:20000
Cons ci ratio: 5.515863e-03	ci left: 9.592055e-01	ci right 9.645591e-01	k: 19239	n:20000
KS ci ratio: 1.181570e+00	ci left: 2.397946e-04	ci right 9.193249e-04	k: 10	n:20000
CORO1B   20000 perm   9 sec   (2297 perm/sec)   p_kst 5.000000e-04   p_cons 9.619500e-01   p_joint 5.500000e-04

Joint ci ratio: 9.236603e-01	ci left: 3.301378e-04	ci right 9.071337e-04	k: 17	n:30000
Cons ci ratio: 4.548746e-03	ci left: 9.589529e-01	ci right 9.633572e-01	k: 28836	n:30000
KS ci ratio: 9.504544e-01	ci left: 3.048758e-04	ci right 8.659558e-04	k: 16	n:30000
CORO1B   30000 perm   11 sec   (2778 perm/sec)   p_kst 5.333333e-04   p_cons 9.612000e-01   p_joint 5.666667e-04

Joint ci ratio: 8.171313e-01	ci left: 3.447132e-04	ci right 8.325889e-04	k: 22	n:40000
Cons ci ratio: 3.965287e-03	ci left: 9.587496e-01	ci right 9.625832e-01	k: 38428	n:40000
KS ci ratio: 8.355065e-01	ci left: 3.250117e-04	ci right 8.024069e-04	k: 21	n:40000
CORO1B   40000 perm   13 sec   (3076 perm/sec)   p_kst 5.250000e-04   p_cons 9.607000e-01   p_joint 5.500000e-04

Joint ci ratio: 7.038275e-01	ci left: 4.048529e-04	ci right 8.564274e-04	k: 30	n:50000
Cons ci ratio: 3.554912e-03	ci left: 9.587762e-01	ci right 9.622101e-01	k: 48026	n:50000
KS ci ratio: 7.277073e-01	ci left: 3.721472e-04	ci right 8.092550e-04	k: 28	n:50000
CORO1B   50000 perm   16 sec   (3223 perm/sec)   p_kst 5.600000e-04   p_cons 9.605200e-01   p_joint 6.000000e-04

Joint ci ratio: 5.975752e-01	ci left: 5.045436e-04	ci right 9.460802e-04	k: 42	n:60000
Cons ci ratio: 3.249478e-03	ci left: 9.588258e-01	ci right 9.619628e-01	k: 57625	n:60000
KS ci ratio: 6.357013e-01	ci left: 4.342262e-04	ci right 8.498946e-04	k: 37	n:60000
CORO1B   60000 perm   20 sec   (3070 perm/sec)   p_kst 6.166667e-04   p_cons 9.604167e-01   p_joint 7.000000e-04

Joint ci ratio: 5.598000e-01	ci left: 5.056335e-04	ci right 9.090561e-04	k: 48	n:70000
Cons ci ratio: 3.015224e-03	ci left: 9.587691e-01	ci right 9.616783e-01	k: 67217	n:70000
KS ci ratio: 5.976065e-01	ci left: 4.324604e-04	ci right 8.109401e-04	k: 42	n:70000
CORO1B   70000 perm   23 sec   (3090 perm/sec)   p_kst 6.000000e-04   p_cons 9.602429e-01   p_joint 6.857143e-04

Joint ci ratio: 4.152854e-01	ci left: 8.823227e-04	ci right 1.355058e-03	k: 88	n:80000
Cons ci ratio: 2.825241e-03	ci left: 9.587334e-01	ci right 9.614581e-01	k: 76809	n:80000
KS ci ratio: 5.841911e-01	ci left: 3.996584e-04	ci right 7.382798e-04	k: 44	n:80000
CORO1B   80000 perm   26 sec   (3123 perm/sec)   p_kst 5.500000e-04   p_cons 9.601125e-01   p_joint 1.100000e-03

Joint ci ratio: 5.145525e-01	ci left: 4.797147e-04	ci right 8.204800e-04	k: 57	n:90000
Cons ci ratio: 2.662513e-03	ci left: 9.588459e-01	ci right 9.614132e-01	k: 86413	n:90000
KS ci ratio: 5.598444e-01	ci left: 3.932633e-04	ci right 7.070612e-04	k: 48	n:90000
CORO1B   90000 perm   28 sec   (3202 perm/sec)   p_kst 5.333333e-04   p_cons 9.601444e-01   p_joint 6.333333e-04

Joint ci ratio: 4.898407e-01	ci left: 4.841422e-04	ci right 8.059727e-04	k: 63	n:100000
Cons ci ratio: 2.533249e-03	ci left: 9.586859e-01	ci right 9.611274e-01	k: 95992	n:100000
KS ci ratio: 5.284247e-01	ci left: 4.056898e-04	ci right 7.045249e-04	k: 54	n:100000
CORO1B   100000 perm   31 sec   (3244 perm/sec)   p_kst 5.400000e-04   p_cons 9.599200e-01   p_joint 6.300000e-04

Joint ci ratio: 3.068091e-01	ci left: 1.254803e-03	ci right 1.717575e-03	k: 162	n:110000
Cons ci ratio: 2.416248e-03	ci left: 9.587146e-01	ci right 9.610429e-01	k: 105588	n:110000
KS ci ratio: 5.017631e-01	ci left: 4.162643e-04	ci right 7.020531e-04	k: 60	n:110000
CORO1B   110000 perm   34 sec   (3272 perm/sec)   p_kst 5.454545e-04   p_cons 9.598909e-01   p_joint 1.472727e-03

Joint ci ratio: 4.524993e-01	ci left: 4.842460e-04	ci right 7.741076e-04	k: 74	n:120000
Cons ci ratio: 2.312839e-03	ci left: 9.587831e-01	ci right 9.610113e-01	k: 115189	n:120000
KS ci ratio: 4.898673e-01	ci left: 4.034473e-04	ci right 6.716538e-04	k: 63	n:120000
CORO1B   120000 perm   37 sec   (3254 perm/sec)   p_kst 5.250000e-04   p_cons 9.599083e-01   p_joint 6.166667e-04

Joint ci ratio: 2.092498e-01	ci left: 2.410637e-03	ci right 2.981137e-03	k: 349	n:130000
Cons ci ratio: 2.221219e-03	ci left: 9.588583e-01	ci right 9.609980e-01	k: 124792	n:130000
KS ci ratio: 4.555593e-01	ci left: 4.401815e-04	ci right 7.059993e-04	k: 73	n:130000
CORO1B   130000 perm   40 sec   (3265 perm/sec)   p_kst 5.615385e-04   p_cons 9.599385e-01   p_joint 2.684615e-03

Joint ci ratio: 2.008179e-01	ci left: 2.441740e-03	ci right 2.993463e-03	k: 379	n:140000
Cons ci ratio: 2.146043e-03	ci left: 9.586929e-01	ci right 9.607595e-01	k: 134363	n:140000
KS ci ratio: 4.327632e-01	ci left: 4.594950e-04	ci right 7.190609e-04	k: 81	n:140000
CORO1B   140000 perm   43 sec   (3270 perm/sec)   p_kst 5.785714e-04   p_cons 9.597357e-01   p_joint 2.707143e-03

Joint ci ratio: 1.952490e-01	ci left: 2.418350e-03	ci right 2.947832e-03	k: 401	n:150000
Cons ci ratio: 2.076902e-03	ci left: 9.585913e-01	ci right 9.605909e-01	k: 143940	n:150000
KS ci ratio: 4.201448e-01	ci left: 4.586174e-04	ci right 7.080143e-04	k: 86	n:150000
CORO1B   150000 perm   46 sec   (3270 perm/sec)   p_kst 5.733333e-04   p_cons 9.596000e-01   p_joint 2.673333e-03

Joint ci ratio: 1.881275e-01	ci left: 2.451661e-03	ci right 2.966622e-03	k: 432	n:160000
Cons ci ratio: 2.008511e-03	ci left: 9.587186e-01	ci right 9.606522e-01	k: 153551	n:160000
KS ci ratio: 4.085695e-01	ci left: 4.579460e-04	ci right 6.982537e-04	k: 91	n:160000
CORO1B   160000 perm   49 sec   (3258 perm/sec)   p_kst 5.687500e-04   p_cons 9.596938e-01   p_joint 2.700000e-03

Joint ci ratio: 1.770129e-01	ci left: 2.621835e-03	ci right 3.136527e-03	k: 488	n:170000
Cons ci ratio: 1.950746e-03	ci left: 9.586592e-01	ci right 9.605369e-01	k: 163133	n:170000
KS ci ratio: 3.842689e-01	ci left: 4.945669e-04	ci right 7.347612e-04	k: 103	n:170000
CORO1B   170000 perm   52 sec   (3257 perm/sec)   p_kst 6.058824e-04   p_cons 9.596059e-01   p_joint 2.870588e-03

Joint ci ratio: 1.768459e-01	ci left: 2.481471e-03	ci right 2.968098e-03	k: 489	n:180000
Cons ci ratio: 1.902974e-03	ci left: 9.583882e-01	ci right 9.602192e-01	k: 172676	n:180000
KS ci ratio: 3.770880e-01	ci left: 4.871864e-04	ci right 7.182808e-04	k: 107	n:180000
CORO1B   180000 perm   56 sec   (3234 perm/sec)   p_kst 5.944444e-04   p_cons 9.593111e-01   p_joint 2.716667e-03

Joint ci ratio: 1.660012e-01	ci left: 2.683368e-03	ci right 3.174098e-03	k: 555	n:190000
Cons ci ratio: 1.853350e-03	ci left: 9.583646e-01	ci right 9.601476e-01	k: 182260	n:190000
KS ci ratio: 3.607522e-01	ci left: 5.093005e-04	ci right 7.379624e-04	k: 117	n:190000
CORO1B   190000 perm   59 sec   (3213 perm/sec)   p_kst 6.157895e-04   p_cons 9.592632e-01   p_joint 2.921053e-03

Joint ci ratio: 1.611452e-01	ci left: 2.712245e-03	ci right 3.192341e-03	k: 589	n:200000
Cons ci ratio: 1.809146e-03	ci left: 9.582683e-01	ci right 9.600084e-01	k: 191829	n:200000
KS ci ratio: 3.450246e-01	ci left: 5.339637e-04	ci right 7.609161e-04	k: 128	n:200000
CORO1B   200000 perm   63 sec   (3198 perm/sec)   p_kst 6.400000e-04   p_cons 9.591450e-01   p_joint 2.945000e-03

Joint ci ratio: 1.578377e-01	ci left: 2.697385e-03	ci right 3.164122e-03	k: 614	n:210000
Cons ci ratio: 1.766555e-03	ci left: 9.582442e-01	ci right 9.599431e-01	k: 201411	n:210000
KS ci ratio: 3.360276e-01	ci left: 5.390205e-04	ci right 7.608543e-04	k: 135	n:210000
CORO1B   210000 perm   66 sec   (3184 perm/sec)   p_kst 6.428571e-04   p_cons 9.591000e-01   p_joint 2.923810e-03

Joint ci ratio: 1.500923e-01	ci left: 2.858872e-03	ci right 3.327099e-03	k: 679	n:220000
Cons ci ratio: 1.725436e-03	ci left: 9.582870e-01	ci right 9.599463e-01	k: 211007	n:220000
KS ci ratio: 3.232074e-01	ci left: 5.603848e-04	ci right 7.803900e-04	k: 146	n:220000
CORO1B   220000 perm   70 sec   (3149 perm/sec)   p_kst 6.636364e-04   p_cons 9.591227e-01   p_joint 3.086364e-03

Joint ci ratio: 1.497714e-01	ci left: 2.747116e-03	ci right 3.195990e-03	k: 682	n:230000
Cons ci ratio: 1.689117e-03	ci left: 9.582299e-01	ci right 9.598541e-01	k: 220581	n:230000
KS ci ratio: 3.127426e-01	ci left: 5.760305e-04	ci right 7.933947e-04	k: 156	n:230000
CORO1B   230000 perm   74 sec   (3128 perm/sec)   p_kst 6.782609e-04   p_cons 9.590478e-01   p_joint 2.965217e-03

Joint ci ratio: 1.470008e-01	ci left: 2.736963e-03	ci right 3.175178e-03	k: 708	n:240000
Cons ci ratio: 1.651573e-03	ci left: 9.583420e-01	ci right 9.599302e-01	k: 230194	n:240000
KS ci ratio: 3.069332e-01	ci left: 5.750857e-04	ci right 7.872742e-04	k: 162	n:240000
CORO1B   240000 perm   77 sec   (3105 perm/sec)   p_kst 6.750000e-04   p_cons 9.591417e-01   p_joint 2.950000e-03

Joint ci ratio: 1.442800e-01	ci left: 2.731548e-03	ci right 3.160104e-03	k: 735	n:250000
Cons ci ratio: 1.618154e-03	ci left: 9.583607e-01	ci right 9.599166e-01	k: 239786	n:250000
KS ci ratio: 3.014359e-01	ci left: 5.742508e-04	ci right 7.816094e-04	k: 168	n:250000
CORO1B   250000 perm   81 sec   (3085 perm/sec)   p_kst 6.720000e-04   p_cons 9.591440e-01   p_joint 2.940000e-03

Joint ci ratio: 1.417049e-01	ci left: 2.726619e-03	ci right 3.146121e-03	k: 762	n:260000
Cons ci ratio: 1.586918e-03	ci left: 9.583666e-01	ci right 9.598924e-01	k: 249375	n:260000
KS ci ratio: 2.953805e-01	ci left: 5.770722e-04	ci right 7.804799e-04	k: 175	n:260000
CORO1B   260000 perm   85 sec   (3064 perm/sec)   p_kst 6.730769e-04   p_cons 9.591346e-01   p_joint 2.930769e-03

Joint ci ratio: 1.383872e-01	ci left: 2.757872e-03	ci right 3.171430e-03	k: 799	n:270000
Cons ci ratio: 1.557791e-03	ci left: 9.583536e-01	ci right 9.598513e-01	k: 258959	n:270000
KS ci ratio: 2.835404e-01	ci left: 6.072245e-04	ci right 8.111475e-04	k: 190	n:270000
CORO1B   270000 perm   89 sec   (3040 perm/sec)   p_kst 7.037037e-04   p_cons 9.591074e-01   p_joint 2.959259e-03

Joint ci ratio: 1.361927e-01	ci left: 2.749043e-03	ci right 3.154210e-03	k: 825	n:280000
Cons ci ratio: 1.528191e-03	ci left: 9.584463e-01	ci right 9.599156e-01	k: 268572	n:280000
KS ci ratio: 2.791897e-01	ci left: 6.054546e-04	ci right 8.051147e-04	k: 196	n:280000
CORO1B   280000 perm   93 sec   (3020 perm/sec)   p_kst 7.000000e-04   p_cons 9.591857e-01   p_joint 2.946429e-03

Joint ci ratio: 1.340993e-01	ci left: 2.740872e-03	ci right 3.138130e-03	k: 851	n:290000
Cons ci ratio: 1.501204e-03	ci left: 9.584806e-01	ci right 9.599240e-01	k: 278170	n:290000
KS ci ratio: 2.763992e-01	ci left: 5.974089e-04	ci right 7.921042e-04	k: 200	n:290000
CORO1B   290000 perm   97 sec   (2998 perm/sec)   p_kst 6.896552e-04   p_cons 9.592069e-01   p_joint 2.934483e-03

Joint ci ratio: 1.320243e-01	ci left: 2.736513e-03	ci right 3.126521e-03	k: 878	n:300000
Cons ci ratio: 1.476980e-03	ci left: 9.584389e-01	ci right 9.598588e-01	k: 287746	n:300000
KS ci ratio: 2.730251e-01	ci left: 5.930138e-04	ci right 7.835128e-04	k: 205	n:300000
CORO1B   300000 perm   101 sec   (2976 perm/sec)   p_kst 6.833333e-04   p_cons 9.591533e-01   p_joint 2.926667e-03

Joint ci ratio: 1.302591e-01	ci left: 2.723117e-03	ci right 3.105625e-03	k: 902	n:310000
Cons ci ratio: 1.453052e-03	ci left: 9.584457e-01	ci right 9.598425e-01	k: 297336	n:310000
KS ci ratio: 2.685013e-01	ci left: 5.949324e-04	ci right 7.823479e-04	k: 212	n:310000
CORO1B   310000 perm   105 sec   (2955 perm/sec)   p_kst 6.838710e-04   p_cons 9.591484e-01   p_joint 2.909677e-03

Joint ci ratio: 1.387676e-01	ci left: 2.314851e-03	ci right 2.663007e-03	k: 795	n:320000
Cons ci ratio: 1.429053e-03	ci left: 9.585183e-01	ci right 9.598921e-01	k: 306947	n:320000
KS ci ratio: 2.666318e-01	ci left: 5.850865e-04	ci right 7.679025e-04	k: 215	n:320000
CORO1B   320000 perm   109 sec   (2932 perm/sec)   p_kst 6.718750e-04   p_cons 9.592094e-01   p_joint 2.484375e-03

Joint ci ratio: 1.368894e-01	ci left: 2.309071e-03	ci right 2.651274e-03	k: 817	n:330000
Cons ci ratio: 1.405930e-03	ci left: 9.586020e-01	ci right 9.599536e-01	k: 316563	n:330000
KS ci ratio: 2.635990e-01	ci left: 5.815010e-04	ci right 7.607892e-04	k: 220	n:330000
CORO1B   330000 perm   113 sec   (2908 perm/sec)   p_kst 6.666667e-04   p_cons 9.592818e-01   p_joint 2.475758e-03

Joint ci ratio: 1.354091e-01	ci left: 2.292294e-03	ci right 2.628041e-03	k: 835	n:340000
Cons ci ratio: 1.386393e-03	ci left: 9.585385e-01	ci right 9.598713e-01	k: 326131	n:340000
KS ci ratio: 2.624161e-01	ci left: 5.698922e-04	ci right 7.446830e-04	k: 222	n:340000
CORO1B   340000 perm   118 sec   (2884 perm/sec)   p_kst 6.529412e-04   p_cons 9.592088e-01   p_joint 2.455882e-03

Joint ci ratio: 1.245355e-01	ci left: 2.647018e-03	ci right 3.001293e-03	k: 987	n:350000
Cons ci ratio: 1.364999e-03	ci left: 9.586315e-01	ci right 9.599437e-01	k: 335752	n:350000
KS ci ratio: 2.595234e-01	ci left: 5.669607e-04	ci right 7.386247e-04	k: 227	n:350000
CORO1B   350000 perm   122 sec   (2862 perm/sec)   p_kst 6.485714e-04   p_cons 9.592914e-01   p_joint 2.820000e-03

Joint ci ratio: 1.332781e-01	ci left: 2.237419e-03	ci right 2.559563e-03	k: 862	n:360000
Cons ci ratio: 1.345615e-03	ci left: 9.586578e-01	ci right 9.599514e-01	k: 345351	n:360000
KS ci ratio: 2.578339e-01	ci left: 5.590045e-04	ci right 7.269803e-04	k: 230	n:360000
CORO1B   360000 perm   127 sec   (2840 perm/sec)   p_kst 6.388889e-04   p_cons 9.593083e-01   p_joint 2.394444e-03

Joint ci ratio: 1.310192e-01	ci left: 2.255350e-03	ci right 2.574144e-03	k: 892	n:370000
Cons ci ratio: 1.327952e-03	ci left: 9.586284e-01	ci right 9.599049e-01	k: 354930	n:370000
KS ci ratio: 2.556310e-01	ci left: 5.540113e-04	ci right 7.188374e-04	k: 234	n:370000
CORO1B   370000 perm   131 sec   (2817 perm/sec)   p_kst 6.324324e-04   p_cons 9.592703e-01   p_joint 2.410811e-03

Joint ci ratio: 1.293641e-01	ci left: 2.254554e-03	ci right 2.568900e-03	k: 915	n:380000
Cons ci ratio: 1.311363e-03	ci left: 9.585768e-01	ci right 9.598372e-01	k: 364500	n:380000
KS ci ratio: 2.503585e-01	ci left: 5.640798e-04	ci right 7.279008e-04	k: 244	n:380000
CORO1B   380000 perm   136 sec   (2795 perm/sec)   p_kst 6.421053e-04   p_cons 9.592105e-01   p_joint 2.407895e-03

Joint ci ratio: 1.279752e-01	ci left: 2.246376e-03	ci right 2.555963e-03	k: 935	n:390000
Cons ci ratio: 1.294361e-03	ci left: 9.585899e-01	ci right 9.598340e-01	k: 374094	n:390000
KS ci ratio: 2.493443e-01	ci left: 5.544230e-04	ci right 7.146859e-04	k: 246	n:390000
CORO1B   390000 perm   141 sec   (2771 perm/sec)   p_kst 6.307692e-04   p_cons 9.592154e-01   p_joint 2.397436e-03

Joint ci ratio: 1.265638e-01	ci left: 2.241044e-03	ci right 2.546235e-03	k: 956	n:400000
Cons ci ratio: 1.278125e-03	ci left: 9.585949e-01	ci right 9.598234e-01	k: 383685	n:400000
KS ci ratio: 2.468587e-01	ci left: 5.522852e-04	ci right 7.100945e-04	k: 251	n:400000
CORO1B   400000 perm   146 sec   (2748 perm/sec)   p_kst 6.275000e-04   p_cons 9.592125e-01   p_joint 2.390000e-03

Joint ci ratio: 1.249422e-01	ci left: 2.245443e-03	ci right 2.547024e-03	k: 981	n:410000
Cons ci ratio: 1.263154e-03	ci left: 9.585581e-01	ci right 9.597720e-01	k: 393259	n:410000
KS ci ratio: 2.444459e-01	ci left: 5.502592e-04	ci right 7.057195e-04	k: 256	n:410000
CORO1B   410000 perm   151 sec   (2723 perm/sec)   p_kst 6.243902e-04   p_cons 9.591683e-01   p_joint 2.392683e-03

Joint ci ratio: 1.233200e-01	ci left: 2.251963e-03	ci right 2.550206e-03	k: 1007	n:420000
Cons ci ratio: 1.247710e-03	ci left: 9.585854e-01	ci right 9.597845e-01	k: 402859	n:420000
KS ci ratio: 2.393754e-01	ci left: 5.617614e-04	ci right 7.166910e-04	k: 267	n:420000
CORO1B   420000 perm   156 sec   (2700 perm/sec)   p_kst 6.357143e-04   p_cons 9.591881e-01   p_joint 2.397619e-03

Joint ci ratio: 1.217594e-01	ci left: 2.258204e-03	ci right 2.553217e-03	k: 1033	n:430000
Cons ci ratio: 1.234136e-03	ci left: 9.585272e-01	ci right 9.597131e-01	k: 412423	n:430000
KS ci ratio: 2.367401e-01	ci left: 5.618184e-04	ci right 7.148079e-04	k: 273	n:430000
CORO1B   430000 perm   161 sec   (2678 perm/sec)   p_kst 6.348837e-04   p_cons 9.591233e-01   p_joint 2.402326e-03

Joint ci ratio: 1.114341e-01	ci left: 2.648223e-03	ci right 2.962926e-03	k: 1233	n:440000
Cons ci ratio: 1.219791e-03	ci left: 9.585495e-01	ci right 9.597217e-01	k: 422021	n:440000
KS ci ratio: 2.329446e-01	ci left: 5.683012e-04	ci right 7.202178e-04	k: 282	n:440000
CORO1B   440000 perm   166 sec   (2655 perm/sec)   p_kst 6.409091e-04   p_cons 9.591386e-01   p_joint 2.802273e-03

Joint ci ratio: 1.182095e-01	ci left: 2.293640e-03	ci right 2.583936e-03	k: 1096	n:450000
Cons ci ratio: 1.205867e-03	ci left: 9.585754e-01	ci right 9.597342e-01	k: 431621	n:450000
KS ci ratio: 2.301159e-01	ci left: 5.703257e-04	ci right 7.206691e-04	k: 289	n:450000
CORO1B   450000 perm   171 sec   (2632 perm/sec)   p_kst 6.422222e-04   p_cons 9.591578e-01   p_joint 2.435556e-03

Joint ci ratio: 1.167287e-01	ci left: 2.302860e-03	ci right 2.590421e-03	k: 1124	n:460000
Cons ci ratio: 1.190520e-03	ci left: 9.587250e-01	ci right 9.598692e-01	k: 441278	n:460000
KS ci ratio: 2.293276e-01	ci left: 5.620247e-04	ci right 7.096004e-04	k: 291	n:460000
CORO1B   460000 perm   176 sec   (2609 perm/sec)   p_kst 6.326087e-04   p_cons 9.593000e-01   p_joint 2.443478e-03

Joint ci ratio: 1.074574e-01	ci left: 2.671647e-03	ci right 2.977087e-03	k: 1326	n:470000
Cons ci ratio: 1.178589e-03	ci left: 9.586777e-01	ci right 9.598103e-01	k: 450846	n:470000
KS ci ratio: 2.258724e-01	ci left: 5.681242e-04	ci right 7.147410e-04	k: 300	n:470000
CORO1B   470000 perm   182 sec   (2587 perm/sec)   p_kst 6.382979e-04   p_cons 9.592468e-01   p_joint 2.821277e-03

Joint ci ratio: 1.065386e-01	ci left: 2.662621e-03	ci right 2.964263e-03	k: 1349	n:480000
Cons ci ratio: 1.167100e-03	ci left: 9.586261e-01	ci right 9.597476e-01	k: 460411	n:480000
KS ci ratio: 2.240198e-01	ci left: 5.661179e-04	ci right 7.108533e-04	k: 305	n:480000
CORO1B   480000 perm   187 sec   (2562 perm/sec)   p_kst 6.354167e-04   p_cons 9.591896e-01   p_joint 2.810417e-03

Joint ci ratio: 1.058365e-01	ci left: 2.644040e-03	ci right 2.941480e-03	k: 1367	n:490000
Cons ci ratio: 1.155848e-03	ci left: 9.585828e-01	ci right 9.596934e-01	k: 469979	n:490000
KS ci ratio: 2.229305e-01	ci left: 5.603441e-04	ci right 7.028110e-04	k: 308	n:490000
CORO1B   490000 perm   193 sec   (2538 perm/sec)   p_kst 6.285714e-04   p_cons 9.591408e-01   p_joint 2.789796e-03

Joint ci ratio: 1.120002e-01	ci left: 2.307084e-03	ci right 2.582732e-03	k: 1221	n:500000
Cons ci ratio: 1.144067e-03	ci left: 9.585997e-01	ci right 9.596990e-01	k: 479576	n:500000
KS ci ratio: 2.194076e-01	ci left: 5.680296e-04	ci right 7.098606e-04	k: 318	n:500000
CORO1B   500000 perm   199 sec   (2516 perm/sec)   p_kst 6.360000e-04   p_cons 9.591520e-01   p_joint 2.442000e-03

Joint ci ratio: 1.106496e-01	ci left: 2.319034e-03	ci right 2.592550e-03	k: 1251	n:510000
Cons ci ratio: 1.132441e-03	ci left: 9.586298e-01	ci right 9.597179e-01	k: 489180	n:510000
KS ci ratio: 2.177084e-01	ci left: 5.661589e-04	ci right 7.062816e-04	k: 323	n:510000
CORO1B   510000 perm   204 sec   (2495 perm/sec)   p_kst 6.333333e-04   p_cons 9.591765e-01   p_joint 2.452941e-03

Joint ci ratio: 1.093040e-01	ci left: 2.332413e-03	ci right 2.603947e-03	k: 1282	n:520000
Cons ci ratio: 1.122153e-03	ci left: 9.585891e-01	ci right 9.596673e-01	k: 498748	n:520000
KS ci ratio: 2.137842e-01	ci left: 5.771017e-04	ci right 7.170206e-04	k: 335	n:520000
CORO1B   520000 perm   210 sec   (2473 perm/sec)   p_kst 6.442308e-04   p_cons 9.591308e-01   p_joint 2.465385e-03

Joint ci ratio: 1.085877e-01	ci left: 2.319606e-03	ci right 2.587766e-03	k: 1299	n:530000
Cons ci ratio: 1.112220e-03	ci left: 9.585443e-01	ci right 9.596129e-01	k: 508313	n:530000
KS ci ratio: 2.128369e-01	ci left: 5.715708e-04	ci right 7.094545e-04	k: 338	n:530000
CORO1B   530000 perm   216 sec   (2449 perm/sec)   p_kst 6.377358e-04   p_cons 9.590811e-01   p_joint 2.450943e-03

Joint ci ratio: 1.076398e-01	ci left: 2.318091e-03	ci right 2.583588e-03	k: 1322	n:540000
Cons ci ratio: 1.101972e-03	ci left: 9.585423e-01	ci right 9.596010e-01	k: 517900	n:540000
KS ci ratio: 2.106728e-01	ci left: 5.732618e-04	ci right 7.099658e-04	k: 345	n:540000
CORO1B   540000 perm   225 sec   (2402 perm/sec)   p_kst 6.388889e-04   p_cons 9.590741e-01   p_joint 2.448148e-03

Joint ci ratio: 1.066370e-01	ci left: 2.320181e-03	ci right 2.583286e-03	k: 1347	n:550000
Cons ci ratio: 1.092457e-03	ci left: 9.585074e-01	ci right 9.595569e-01	k: 527469	n:550000
KS ci ratio: 2.079847e-01	ci left: 5.783449e-04	ci right 7.142773e-04	k: 354	n:550000
CORO1B   550000 perm   235 sec   (2339 perm/sec)   p_kst 6.436364e-04   p_cons 9.590345e-01   p_joint 2.449091e-03

Joint ci ratio: 1.059327e-01	ci left: 2.310037e-03	ci right 2.570154e-03	k: 1365	n:560000
Cons ci ratio: 1.083233e-03	ci left: 9.584702e-01	ci right 9.595108e-01	k: 537036	n:560000
KS ci ratio: 2.071120e-01	ci left: 5.730959e-04	ci right 7.071577e-04	k: 357	n:560000
CORO1B   560000 perm   242 sec   (2313 perm/sec)   p_kst 6.375000e-04   p_cons 9.589929e-01   p_joint 2.437500e-03

Joint ci ratio: 1.049386e-01	ci left: 2.313921e-03	ci right 2.571879e-03	k: 1391	n:570000
Cons ci ratio: 1.073591e-03	ci left: 9.584820e-01	ci right 9.595133e-01	k: 546630	n:570000
KS ci ratio: 2.040008e-01	ci left: 5.813468e-04	ci right 7.150413e-04	k: 368	n:570000
CORO1B   570000 perm   249 sec   (2293 perm/sec)   p_kst 6.456140e-04   p_cons 9.590000e-01   p_joint 2.440351e-03

Joint ci ratio: 1.042301e-01	ci left: 2.305927e-03	ci right 2.561152e-03	k: 1410	n:580000
Cons ci ratio: 1.064692e-03	ci left: 9.584570e-01	ci right 9.594797e-01	k: 556203	n:580000
KS ci ratio: 2.026328e-01	ci left: 5.795053e-04	ci right 7.117721e-04	k: 373	n:580000
CORO1B   580000 perm   255 sec   (2276 perm/sec)   p_kst 6.431034e-04   p_cons 9.589707e-01   p_joint 2.431034e-03

Joint ci ratio: 1.033549e-01	ci left: 2.306466e-03	ci right 2.559477e-03	k: 1434	n:590000
Cons ci ratio: 1.056101e-03	ci left: 9.584261e-01	ci right 9.594405e-01	k: 565772	n:590000
KS ci ratio: 2.015583e-01	ci left: 5.761197e-04	ci right 7.068306e-04	k: 377	n:590000
CORO1B   590000 perm   261 sec   (2259 perm/sec)   p_kst 6.389831e-04   p_cons 9.589356e-01   p_joint 2.430508e-03

Joint ci ratio: 1.025013e-01	ci left: 2.306995e-03	ci right 2.557848e-03	k: 1458	n:600000
Cons ci ratio: 1.047249e-03	ci left: 9.584315e-01	ci right 9.594374e-01	k: 575362	n:600000
KS ci ratio: 2.010279e-01	ci left: 5.696828e-04	ci right 6.985514e-04	k: 379	n:600000
CORO1B   600000 perm   268 sec   (2243 perm/sec)   p_kst 6.316667e-04   p_cons 9.589367e-01   p_joint 2.430000e-03

Joint ci ratio: 1.510214e-01	ci left: 1.019952e-03	ci right 1.188123e-03	k: 672	n:610000
Cons ci ratio: 1.038810e-03	ci left: 9.584219e-01	ci right 9.594196e-01	k: 584943	n:610000
KS ci ratio: 1.997185e-01	ci left: 5.681292e-04	ci right 6.957073e-04	k: 384	n:610000
CORO1B   610000 perm   274 sec   (2227 perm/sec)   p_kst 6.295082e-04   p_cons 9.589230e-01   p_joint 1.101639e-03

Joint ci ratio: 1.502426e-01	ci left: 1.014365e-03	ci right 1.180675e-03	k: 679	n:620000
Cons ci ratio: 1.030530e-03	ci left: 9.584159e-01	ci right 9.594056e-01	k: 594526	n:620000
KS ci ratio: 1.984343e-01	ci left: 5.666283e-04	ci right 6.929522e-04	k: 389	n:620000
CORO1B   620000 perm   280 sec   (2211 perm/sec)   p_kst 6.274194e-04   p_cons 9.589129e-01   p_joint 1.095161e-03

Joint ci ratio: 1.487191e-01	ci left: 1.019656e-03	ci right 1.184987e-03	k: 693	n:630000
Cons ci ratio: 1.021991e-03	ci left: 9.584452e-01	ci right 9.594268e-01	k: 604131	n:630000
KS ci ratio: 1.969253e-01	ci left: 5.666867e-04	ci right 6.919476e-04	k: 395	n:630000
CORO1B   630000 perm   287 sec   (2194 perm/sec)   p_kst 6.269841e-04   p_cons 9.589381e-01   p_joint 1.100000e-03

Joint ci ratio: 1.471370e-01	ci left: 1.026294e-03	ci right 1.190776e-03	k: 708	n:640000
Cons ci ratio: 1.014546e-03	ci left: 9.584045e-01	ci right 9.593789e-01	k: 613692	n:640000
KS ci ratio: 1.949656e-01	ci left: 5.697191e-04	ci right 6.942482e-04	k: 403	n:640000
CORO1B   640000 perm   294 sec   (2178 perm/sec)   p_kst 6.296875e-04   p_cons 9.588937e-01   p_joint 1.106250e-03

Joint ci ratio: 9.480979e-02	ci left: 2.498682e-03	ci right 2.748860e-03	k: 1704	n:650000
Cons ci ratio: 1.007829e-03	ci left: 9.583202e-01	ci right 9.592880e-01	k: 623224	n:650000
KS ci ratio: 1.940079e-01	ci left: 5.668083e-04	ci right 6.900207e-04	k: 407	n:650000
CORO1B   650000 perm   301 sec   (2162 perm/sec)   p_kst 6.261538e-04   p_cons 9.588062e-01   p_joint 2.621538e-03

Joint ci ratio: 9.414963e-02	ci left: 2.496328e-03	ci right 2.744434e-03	k: 1728	n:660000
Cons ci ratio: 9.999740e-04	ci left: 9.583391e-01	ci right 9.592993e-01	k: 632822	n:660000
KS ci ratio: 1.930641e-01	ci left: 5.639871e-04	ci right 6.859199e-04	k: 411	n:660000
CORO1B   660000 perm   307 sec   (2147 perm/sec)   p_kst 6.227273e-04   p_cons 9.588212e-01   p_joint 2.618182e-03

Joint ci ratio: 1.442176e-01	ci left: 1.022046e-03	ci right 1.182318e-03	k: 737	n:670000
Cons ci ratio: 9.928436e-04	ci left: 9.583139e-01	ci right 9.592672e-01	k: 642391	n:670000
KS ci ratio: 1.923655e-01	ci left: 5.598309e-04	ci right 6.803758e-04	k: 414	n:670000
CORO1B   670000 perm   314 sec   (2131 perm/sec)   p_kst 6.179104e-04   p_cons 9.587925e-01   p_joint 1.100000e-03

Joint ci ratio: 1.432504e-01	ci left: 1.021193e-03	ci right 1.180165e-03	k: 747	n:680000
Cons ci ratio: 9.856247e-04	ci left: 9.583086e-01	ci right 9.592551e-01	k: 651973	n:680000
KS ci ratio: 1.909898e-01	ci left: 5.599982e-04	ci right 6.796167e-04	k: 420	n:680000
CORO1B   680000 perm   322 sec   (2114 perm/sec)   p_kst 6.176471e-04   p_cons 9.587838e-01   p_joint 1.098529e-03

Joint ci ratio: 1.420214e-01	ci left: 1.024562e-03	ci right 1.182574e-03	k: 760	n:690000
Cons ci ratio: 9.786865e-04	ci left: 9.582934e-01	ci right 9.592332e-01	k: 661548	n:690000
KS ci ratio: 1.889801e-01	ci left: 5.643055e-04	ci right 6.834302e-04	k: 429	n:690000
CORO1B   690000 perm   329 sec   (2099 perm/sec)   p_kst 6.217391e-04   p_cons 9.587652e-01   p_joint 1.101449e-03

Joint ci ratio: 1.414653e-01	ci left: 1.018192e-03	ci right 1.174555e-03	k: 766	n:700000
Cons ci ratio: 9.716995e-04	ci left: 9.582944e-01	ci right 9.592275e-01	k: 671134	n:700000
KS ci ratio: 1.885427e-01	ci left: 5.589660e-04	ci right 6.766591e-04	k: 431	n:700000
CORO1B   700000 perm   336 sec   (2083 perm/sec)   p_kst 6.157143e-04   p_cons 9.587629e-01   p_joint 1.094286e-03

Joint ci ratio: 1.409157e-01	ci left: 1.012003e-03	ci right 1.166761e-03	k: 772	n:710000
Cons ci ratio: 9.651007e-04	ci left: 9.582756e-01	ci right 9.592023e-01	k: 680706	n:710000
KS ci ratio: 1.874612e-01	ci left: 5.578040e-04	ci right 6.745021e-04	k: 436	n:710000
CORO1B   710000 perm   343 sec   (2068 perm/sec)   p_kst 6.140845e-04   p_cons 9.587408e-01   p_joint 1.087324e-03

Joint ci ratio: 1.395677e-01	ci left: 1.018050e-03	ci right 1.172120e-03	k: 787	n:720000
Cons ci ratio: 9.587687e-04	ci left: 9.582462e-01	ci right 9.591668e-01	k: 690270	n:720000
KS ci ratio: 1.863980e-01	ci left: 5.566762e-04	ci right 6.724031e-04	k: 441	n:720000
CORO1B   720000 perm   351 sec   (2054 perm/sec)   p_kst 6.125000e-04   p_cons 9.587083e-01   p_joint 1.093056e-03

Joint ci ratio: 1.392155e-01	ci left: 1.009393e-03	ci right 1.161734e-03	k: 791	n:730000
Cons ci ratio: 9.522957e-04	ci left: 9.582397e-01	ci right 9.591540e-01	k: 699850	n:730000
KS ci ratio: 1.859783e-01	ci left: 5.516624e-04	ci right 6.660595e-04	k: 443	n:730000
CORO1B   730000 perm   358 sec   (2038 perm/sec)   p_kst 6.068493e-04   p_cons 9.586986e-01   p_joint 1.083562e-03

Joint ci ratio: 9.238574e-02	ci left: 2.314874e-03	ci right 2.540401e-03	k: 1795	n:740000
Cons ci ratio: 9.460649e-04	ci left: 9.582238e-01	ci right 9.591321e-01	k: 709423	n:740000
KS ci ratio: 1.849400e-01	ci left: 5.506505e-04	ci right 6.641288e-04	k: 448	n:740000
CORO1B   740000 perm   366 sec   (2023 perm/sec)   p_kst 6.054054e-04   p_cons 9.586797e-01   p_joint 2.425676e-03

Joint ci ratio: 1.371527e-01	ci left: 1.013369e-03	ci right 1.163860e-03	k: 815	n:750000
Cons ci ratio: 9.401127e-04	ci left: 9.581950e-01	ci right 9.590975e-01	k: 718986	n:750000
KS ci ratio: 1.833139e-01	ci left: 5.534836e-04	ci right 6.664315e-04	k: 456	n:750000
CORO1B   750000 perm   373 sec   (2008 perm/sec)   p_kst 6.080000e-04   p_cons 9.586480e-01   p_joint 1.086667e-03

Joint ci ratio: 9.107646e-02	ci left: 2.320808e-03	ci right 2.543538e-03	k: 1847	n:760000
Cons ci ratio: 9.339301e-04	ci left: 9.581960e-01	ci right 9.590926e-01	k: 728571	n:760000
KS ci ratio: 1.817299e-01	ci left: 5.562464e-04	ci right 6.686693e-04	k: 464	n:760000
CORO1B   760000 perm   381 sec   (1995 perm/sec)   p_kst 6.105263e-04   p_cons 9.586461e-01   p_joint 2.430263e-03

Joint ci ratio: 1.355835e-01	ci left: 1.010881e-03	ci right 1.159147e-03	k: 834	n:770000
Cons ci ratio: 9.276246e-04	ci left: 9.582179e-01	ci right 9.591085e-01	k: 738172	n:770000
KS ci ratio: 1.815354e-01	ci left: 5.502619e-04	ci right 6.613431e-04	k: 465	n:770000
CORO1B   770000 perm   389 sec   (1981 perm/sec)   p_kst 6.038961e-04   p_cons 9.586649e-01   p_joint 1.083117e-03

Joint ci ratio: 1.350994e-01	ci left: 1.005353e-03	ci right 1.152239e-03	k: 840	n:780000
Cons ci ratio: 9.219370e-04	ci left: 9.581968e-01	ci right 9.590819e-01	k: 747740	n:780000
KS ci ratio: 1.813415e-01	ci left: 5.444310e-04	ci right 6.542048e-04	k: 466	n:780000
CORO1B   780000 perm   397 sec   (1963 perm/sec)   p_kst 5.974359e-04   p_cons 9.586410e-01   p_joint 1.076923e-03

Joint ci ratio: 1.346205e-01	ci left: 9.999656e-04	ci right 1.145505e-03	k: 846	n:790000
Cons ci ratio: 9.160307e-04	ci left: 9.582042e-01	ci right 9.590836e-01	k: 757330	n:790000
KS ci ratio: 1.811483e-01	ci left: 5.387477e-04	ci right 6.472471e-04	k: 467	n:790000
CORO1B   790000 perm   405 sec   (1949 perm/sec)   p_kst 5.911392e-04   p_cons 9.586456e-01   p_joint 1.070886e-03

Joint ci ratio: 1.333663e-01	ci left: 1.006796e-03	ci right 1.151856e-03	k: 862	n:800000
Cons ci ratio: 9.100356e-04	ci left: 9.582290e-01	ci right 9.591027e-01	k: 766934	n:800000
KS ci ratio: 1.788689e-01	ci left: 5.463377e-04	ci right 6.548314e-04	k: 479	n:800000
CORO1B   800000 perm   413 sec   (1935 perm/sec)   p_kst 5.987500e-04   p_cons 9.586675e-01   p_joint 1.077500e-03

Joint ci ratio: 1.322972e-01	ci left: 1.011076e-03	ci right 1.155493e-03	k: 876	n:810000
Cons ci ratio: 9.042128e-04	ci left: 9.582483e-01	ci right 9.591163e-01	k: 776534	n:810000
KS ci ratio: 1.773965e-01	ci left: 5.490290e-04	ci right 6.570634e-04	k: 487	n:810000
CORO1B   810000 perm   421 sec   (1922 perm/sec)   p_kst 6.012346e-04   p_cons 9.586840e-01   p_joint 1.081481e-03

Joint ci ratio: 1.312535e-01	ci left: 1.015256e-03	ci right 1.159037e-03	k: 890	n:820000
Cons ci ratio: 8.981818e-04	ci left: 9.582953e-01	ci right 9.591576e-01	k: 786157	n:820000
KS ci ratio: 1.759598e-01	ci left: 5.516583e-04	ci right 6.592375e-04	k: 495	n:820000
CORO1B   820000 perm   430 sec   (1909 perm/sec)   p_kst 6.036585e-04   p_cons 9.587280e-01   p_joint 1.085366e-03

Joint ci ratio: 1.301621e-01	ci left: 1.020506e-03	ci right 1.163736e-03	k: 905	n:830000
Cons ci ratio: 8.933427e-04	ci left: 9.582455e-01	ci right 9.591031e-01	k: 795701	n:830000
KS ci ratio: 1.750797e-01	ci left: 5.507712e-04	ci right 6.575834e-04	k: 500	n:830000
CORO1B   830000 perm   438 sec   (1895 perm/sec)   p_kst 6.024096e-04   p_cons 9.586759e-01   p_joint 1.090361e-03

Joint ci ratio: 1.292380e-01	ci left: 1.023331e-03	ci right 1.165859e-03	k: 918	n:840000
Cons ci ratio: 8.880059e-04	ci left: 9.582484e-01	ci right 9.591008e-01	k: 805288	n:840000
KS ci ratio: 1.738692e-01	ci left: 5.521839e-04	ci right 6.584518e-04	k: 507	n:840000
CORO1B   840000 perm   446 sec   (1882 perm/sec)   p_kst 6.035714e-04   p_cons 9.586762e-01   p_joint 1.092857e-03

Joint ci ratio: 1.281271e-01	ci left: 1.029510e-03	ci right 1.171572e-03	k: 934	n:850000
Cons ci ratio: 8.827898e-04	ci left: 9.582488e-01	ci right 9.590963e-01	k: 814873	n:850000
KS ci ratio: 1.723489e-01	ci left: 5.558172e-04	ci right 6.617518e-04	k: 516	n:850000
CORO1B   850000 perm   455 sec   (1869 perm/sec)   p_kst 6.070588e-04   p_cons 9.586741e-01   p_joint 1.098824e-03

Joint ci ratio: 8.568262e-02	ci left: 2.323854e-03	ci right 2.533008e-03	k: 2087	n:860000
Cons ci ratio: 8.779608e-04	ci left: 9.582224e-01	ci right 9.590652e-01	k: 824435	n:860000
KS ci ratio: 1.711937e-01	ci left: 5.571438e-04	ci right 6.625461e-04	k: 523	n:860000
CORO1B   860000 perm   463 sec   (1857 perm/sec)   p_kst 6.081395e-04   p_cons 9.586453e-01   p_joint 2.426744e-03

Joint ci ratio: 8.513382e-02	ci left: 2.327515e-03	ci right 2.535590e-03	k: 2114	n:870000
Cons ci ratio: 8.729440e-04	ci left: 9.582209e-01	ci right 9.590588e-01	k: 834018	n:870000
KS ci ratio: 1.695828e-01	ci left: 5.617441e-04	ci right 6.669144e-04	k: 533	n:870000
CORO1B   870000 perm   472 sec   (1844 perm/sec)   p_kst 6.126437e-04   p_cons 9.586414e-01   p_joint 2.429885e-03

Joint ci ratio: 8.457564e-02	ci left: 2.332209e-03	ci right 2.539270e-03	k: 2142	n:880000
Cons ci ratio: 8.678755e-04	ci left: 9.582319e-01	ci right 9.590650e-01	k: 843612	n:880000
KS ci ratio: 1.675549e-01	ci left: 5.695103e-04	ci right 6.747310e-04	k: 546	n:880000
CORO1B   880000 perm   480 sec   (1832 perm/sec)   p_kst 6.204545e-04   p_cons 9.586500e-01   p_joint 2.434091e-03

Joint ci ratio: 8.410601e-02	ci left: 2.332402e-03	ci right 2.538274e-03	k: 2166	n:890000
Cons ci ratio: 8.636889e-04	ci left: 9.581694e-01	ci right 9.589984e-01	k: 853141	n:890000
KS ci ratio: 1.661930e-01	ci left: 5.728015e-04	ci right 6.776839e-04	k: 555	n:890000
CORO1B   890000 perm   489 sec   (1818 perm/sec)   p_kst 6.235955e-04   p_cons 9.585854e-01   p_joint 2.433708e-03

Joint ci ratio: 8.373995e-02	ci left: 2.327154e-03	ci right 2.531625e-03	k: 2185	n:900000
Cons ci ratio: 8.591277e-04	ci left: 9.581484e-01	ci right 9.589731e-01	k: 862706	n:900000
KS ci ratio: 1.651565e-01	ci left: 5.738923e-04	ci right 6.782540e-04	k: 562	n:900000
CORO1B   900000 perm   498 sec   (1807 perm/sec)   p_kst 6.244444e-04   p_cons 9.585622e-01   p_joint 2.427778e-03

Joint ci ratio: 8.324627e-02	ci left: 2.329556e-03	ci right 2.532973e-03	k: 2211	n:910000
Cons ci ratio: 8.544724e-04	ci left: 9.581434e-01	ci right 9.589636e-01	k: 872285	n:910000
KS ci ratio: 1.644281e-01	ci left: 5.728537e-04	ci right 6.765216e-04	k: 567	n:910000
CORO1B   910000 perm   507 sec   (1795 perm/sec)   p_kst 6.230769e-04   p_cons 9.585549e-01   p_joint 2.429670e-03

Joint ci ratio: 8.265024e-02	ci left: 2.338296e-03	ci right 2.540944e-03	k: 2243	n:920000
Cons ci ratio: 8.500313e-04	ci left: 9.581254e-01	ci right 9.589413e-01	k: 881852	n:920000
KS ci ratio: 1.631405e-01	ci left: 5.760087e-04	ci right 6.793513e-04	k: 576	n:920000
CORO1B   920000 perm   516 sec   (1784 perm/sec)   p_kst 6.260870e-04   p_cons 9.585348e-01   p_joint 2.438043e-03

Joint ci ratio: 1.216618e-01	ci left: 1.047203e-03	ci right 1.183891e-03	k: 1036	n:930000
Cons ci ratio: 8.455900e-04	ci left: 9.581143e-01	ci right 9.589259e-01	k: 891425	n:930000
KS ci ratio: 1.618826e-01	ci left: 5.790990e-04	ci right 6.821170e-04	k: 585	n:930000
CORO1B   930000 perm   525 sec   (1773 perm/sec)   p_kst 6.290323e-04   p_cons 9.585215e-01   p_joint 1.113978e-03

Joint ci ratio: 1.205618e-01	ci left: 1.055664e-03	ci right 1.192121e-03	k: 1055	n:940000
Cons ci ratio: 8.410825e-04	ci left: 9.581162e-01	ci right 9.589235e-01	k: 901010	n:940000
KS ci ratio: 1.599822e-01	ci left: 5.872324e-04	ci right 6.903531e-04	k: 599	n:940000
CORO1B   940000 perm   533 sec   (1762 perm/sec)   p_kst 6.372340e-04   p_cons 9.585213e-01   p_joint 1.122340e-03

Joint ci ratio: 1.201079e-01	ci left: 1.052719e-03	ci right 1.188247e-03	k: 1063	n:950000
Cons ci ratio: 8.367017e-04	ci left: 9.581129e-01	ci right 9.589159e-01	k: 910590	n:950000
KS ci ratio: 1.593198e-01	ci left: 5.861039e-04	ci right 6.885595e-04	k: 604	n:950000
CORO1B   950000 perm   543 sec   (1751 perm/sec)   p_kst 6.357895e-04   p_cons 9.585158e-01   p_joint 1.118947e-03

Joint ci ratio: 1.194919e-01	ci left: 1.052868e-03	ci right 1.187671e-03	k: 1074	n:960000
Cons ci ratio: 8.320506e-04	ci left: 9.581420e-01	ci right 9.589406e-01	k: 920201	n:960000
KS ci ratio: 1.589266e-01	ci left: 5.829991e-04	ci right 6.846364e-04	k: 607	n:960000
CORO1B   960000 perm   552 sec   (1741 perm/sec)   p_kst 6.322917e-04   p_cons 9.585427e-01   p_joint 1.118750e-03

Joint ci ratio: 1.188852e-01	ci left: 1.053016e-03	ci right 1.187105e-03	k: 1085	n:970000
Cons ci ratio: 8.276477e-04	ci left: 9.581540e-01	ci right 9.589484e-01	k: 929796	n:970000
KS ci ratio: 1.578911e-01	ci left: 5.849094e-04	ci right 6.861524e-04	k: 615	n:970000
CORO1B   970000 perm   561 sec   (1730 perm/sec)   p_kst 6.340206e-04   p_cons 9.585526e-01   p_joint 1.118557e-03

Joint ci ratio: 1.179651e-01	ci left: 1.059104e-03	ci right 1.192852e-03	k: 1102	n:980000
Cons ci ratio: 8.234090e-04	ci left: 9.581566e-01	ci right 9.589468e-01	k: 939382	n:980000
KS ci ratio: 1.563748e-01	ci left: 5.907045e-04	ci right 6.918766e-04	k: 627	n:980000
CORO1B   980000 perm   570 sec   (1719 perm/sec)   p_kst 6.397959e-04   p_cons 9.585531e-01   p_joint 1.124490e-03

Joint ci ratio: 1.172759e-01	ci left: 1.061151e-03	ci right 1.194321e-03	k: 1115	n:990000
Cons ci ratio: 8.192349e-04	ci left: 9.581591e-01	ci right 9.589453e-01	k: 948968	n:990000
KS ci ratio: 1.555105e-01	ci left: 5.915326e-04	ci right 6.922343e-04	k: 634	n:990000
CORO1B   990000 perm   580 sec   (1708 perm/sec)   p_kst 6.404040e-04   p_cons 9.585535e-01   p_joint 1.126263e-03

Joint ci ratio: 1.168060e-01	ci left: 1.059276e-03	ci right 1.191641e-03	k: 1124	n:1000000
Cons ci ratio: 8.148568e-04	ci left: 9.581876e-01	ci right 9.589697e-01	k: 958580	n:1000000
KS ci ratio: 1.546603e-01	ci left: 5.923456e-04	ci right 6.925834e-04	k: 641	n:1000000
CORO1B   1000000 perm   589 sec   (1698 perm/sec)   p_kst 6.410000e-04   p_cons 9.585800e-01   p_joint 1.124000e-03

Joint ci ratio: 1.163417e-01	ci left: 1.057439e-03	ci right 1.189013e-03	k: 1133	n:1010000
Cons ci ratio: 8.106591e-04	ci left: 9.582047e-01	ci right 9.589828e-01	k: 968181	n:1010000
KS ci ratio: 1.540617e-01	ci left: 5.912401e-04	ci right 6.908677e-04	k: 646	n:1010000
CORO1B   1010000 perm   598 sec   (1688 perm/sec)   p_kst 6.396040e-04   p_cons 9.585950e-01   p_joint 1.121782e-03

Joint ci ratio: 1.157815e-01	ci left: 1.057543e-03	ci right 1.188453e-03	k: 1144	n:1020000
Cons ci ratio: 8.065155e-04	ci left: 9.582224e-01	ci right 9.589965e-01	k: 977783	n:1020000
KS ci ratio: 1.533523e-01	ci left: 5.910997e-04	ci right 6.902030e-04	k: 652	n:1020000
CORO1B   1020000 perm   608 sec   (1678 perm/sec)   p_kst 6.392157e-04   p_cons 9.586108e-01   p_joint 1.121569e-03

Joint ci ratio: 1.152793e-01	ci left: 1.056704e-03	ci right 1.186904e-03	k: 1154	n:1030000
Cons ci ratio: 8.025918e-04	ci left: 9.582242e-01	ci right 9.589946e-01	k: 987369	n:1030000
KS ci ratio: 1.524213e-01	ci left: 5.928308e-04	ci right 6.915658e-04	k: 660	n:1030000
CORO1B   1030000 perm   618 sec   (1668 perm/sec)   p_kst 6.407767e-04   p_cons 9.586107e-01   p_joint 1.120388e-03

Joint ci ratio: 1.147342e-01	ci left: 1.056816e-03	ci right 1.186373e-03	k: 1165	n:1040000
Cons ci ratio: 7.983473e-04	ci left: 9.582637e-01	ci right 9.590299e-01	k: 996994	n:1040000
KS ci ratio: 1.515071e-01	ci left: 5.945303e-04	ci right 6.929007e-04	k: 668	n:1040000
CORO1B   1040000 perm   627 sec   (1658 perm/sec)   p_kst 6.423077e-04   p_cons 9.586481e-01   p_joint 1.120192e-03

Joint ci ratio: 1.140031e-01	ci left: 1.060628e-03	ci right 1.189768e-03	k: 1180	n:1050000
Cons ci ratio: 7.947033e-04	ci left: 9.582488e-01	ci right 9.590115e-01	k: 1006563	n:1050000
KS ci ratio: 1.502764e-01	ci left: 5.989489e-04	ci right 6.971729e-04	k: 679	n:1050000
CORO1B   1050000 perm   637 sec   (1648 perm/sec)   p_kst 6.466667e-04   p_cons 9.586314e-01   p_joint 1.123810e-03

Joint ci ratio: 1.134282e-01	ci left: 1.061621e-03	ci right 1.190186e-03	k: 1192	n:1060000
Cons ci ratio: 7.908076e-04	ci left: 9.582645e-01	ci right 9.590235e-01	k: 1016164	n:1060000
KS ci ratio: 1.494000e-01	ci left: 6.005627e-04	ci right 6.984257e-04	k: 687	n:1060000
CORO1B   1060000 perm   647 sec   (1638 perm/sec)   p_kst 6.481132e-04   p_cons 9.586453e-01   p_joint 1.124528e-03

Joint ci ratio: 7.660702e-02	ci left: 2.347585e-03	ci right 2.535499e-03	k: 2611	n:1070000
Cons ci ratio: 7.870891e-04	ci left: 9.582678e-01	ci right 9.590232e-01	k: 1025752	n:1070000
KS ci ratio: 1.487528e-01	ci left: 6.003483e-04	ci right 6.977149e-04	k: 693	n:1070000
CORO1B   1070000 perm   657 sec   (1628 perm/sec)   p_kst 6.476636e-04   p_cons 9.586467e-01   p_joint 2.440187e-03

Joint ci ratio: 7.634464e-02	ci left: 2.342196e-03	ci right 2.529007e-03	k: 2629	n:1080000
Cons ci ratio: 7.837153e-04	ci left: 9.582412e-01	ci right 9.589934e-01	k: 1035308	n:1080000
KS ci ratio: 1.483262e-01	ci left: 5.983555e-04	ci right 6.950958e-04	k: 697	n:1080000
CORO1B   1080000 perm   667 sec   (1618 perm/sec)   p_kst 6.453704e-04   p_cons 9.586185e-01   p_joint 2.434259e-03

Joint ci ratio: 7.607054e-02	ci left: 2.337806e-03	ci right 2.523569e-03	k: 2648	n:1090000
Cons ci ratio: 7.798159e-04	ci left: 9.582732e-01	ci right 9.590216e-01	k: 1044927	n:1090000
KS ci ratio: 1.476928e-01	ci left: 5.981667e-04	ci right 6.944271e-04	k: 703	n:1090000
CORO1B   1090000 perm   678 sec   (1608 perm/sec)   p_kst 6.449541e-04   p_cons 9.586486e-01   p_joint 2.429358e-03

Joint ci ratio: 7.575669e-02	ci left: 2.336174e-03	ci right 2.521007e-03	k: 2670	n:1100000
Cons ci ratio: 7.764810e-04	ci left: 9.582525e-01	ci right 9.589978e-01	k: 1054489	n:1100000
KS ci ratio: 1.469639e-01	ci left: 5.988579e-04	ci right 6.947122e-04	k: 710	n:1100000
CORO1B   1100000 perm   688 sec   (1600 perm/sec)   p_kst 6.454545e-04   p_cons 9.586264e-01   p_joint 2.427273e-03

Joint ci ratio: 7.544670e-02	ci left: 2.334572e-03	ci right 2.518490e-03	k: 2692	n:1110000
Cons ci ratio: 7.729075e-04	ci left: 9.582612e-01	ci right 9.590030e-01	k: 1064083	n:1110000
KS ci ratio: 1.463477e-01	ci left: 5.986699e-04	ci right 6.940571e-04	k: 716	n:1110000
CORO1B   1110000 perm   698 sec   (1590 perm/sec)   p_kst 6.450450e-04   p_cons 9.586333e-01   p_joint 2.425225e-03

Joint ci ratio: 7.496079e-02	ci left: 2.344391e-03	ci right 2.527840e-03	k: 2727	n:1120000
Cons ci ratio: 7.693395e-04	ci left: 9.582743e-01	ci right 9.590127e-01	k: 1073682	n:1120000
KS ci ratio: 1.455380e-01	ci left: 6.002067e-04	ci right 6.952637e-04	k: 724	n:1120000
CORO1B   1120000 perm   708 sec   (1581 perm/sec)   p_kst 6.464286e-04   p_cons 9.586446e-01   p_joint 2.434821e-03

Joint ci ratio: 7.459247e-02	ci left: 2.347091e-03	ci right 2.529811e-03	k: 2754	n:1130000
Cons ci ratio: 7.658888e-04	ci left: 9.582800e-01	ci right 9.590150e-01	k: 1083273	n:1130000
KS ci ratio: 1.450388e-01	ci left: 5.991590e-04	ci right 6.936964e-04	k: 729	n:1130000
CORO1B   1130000 perm   719 sec   (1572 perm/sec)   p_kst 6.451327e-04   p_cons 9.586487e-01   p_joint 2.437168e-03

Joint ci ratio: 7.428309e-02	ci left: 2.346302e-03	ci right 2.528170e-03	k: 2777	n:1140000
Cons ci ratio: 7.623828e-04	ci left: 9.582961e-01	ci right 9.590279e-01	k: 1092876	n:1140000
KS ci ratio: 1.444464e-01	ci left: 5.989758e-04	ci right 6.930650e-04	k: 735	n:1140000
CORO1B   1140000 perm   730 sec   (1563 perm/sec)   p_kst 6.447368e-04   p_cons 9.586632e-01   p_joint 2.435965e-03

Joint ci ratio: 7.395106e-02	ci left: 2.347236e-03	ci right 2.528328e-03	k: 2802	n:1150000
Cons ci ratio: 7.590078e-04	ci left: 9.583033e-01	ci right 9.590318e-01	k: 1102469	n:1150000
KS ci ratio: 1.440556e-01	ci left: 5.971200e-04	ci right 6.906421e-04	k: 739	n:1150000
CORO1B   1150000 perm   740 sec   (1553 perm/sec)   p_kst 6.426087e-04   p_cons 9.586687e-01   p_joint 2.436522e-03

Joint ci ratio: 7.355829e-02	ci left: 2.352386e-03	ci right 2.532871e-03	k: 2832	n:1160000
Cons ci ratio: 7.257972e-04	ci left: 9.614046e-01	ci right 9.621035e-01	k: 1115636	n:1160000
KS ci ratio: 1.430918e-01	ci left: 6.002835e-04	ci right 6.936184e-04	k: 749	n:1160000
CORO1B   1160000 perm   751 sec   (1545 perm/sec)   p_kst 6.456897e-04   p_cons 9.617552e-01   p_joint 2.441379e-03

Joint ci ratio: 7.318452e-02	ci left: 2.356612e-03	ci right 2.536463e-03	k: 2861	n:1170000
Cons ci ratio: 7.226850e-04	ci left: 9.614065e-01	ci right 9.621024e-01	k: 1125254	n:1170000
KS ci ratio: 1.425229e-01	ci left: 6.000978e-04	ci right 6.930013e-04	k: 755	n:1170000
CORO1B   1170000 perm   762 sec   (1536 perm/sec)   p_kst 6.452991e-04   p_cons 9.617556e-01   p_joint 2.445299e-03

Joint ci ratio: 7.282902e-02	ci left: 2.359937e-03	ci right 2.539129e-03	k: 2889	n:1180000
Cons ci ratio: 7.196457e-04	ci left: 9.614049e-01	ci right 9.620979e-01	k: 1134868	n:1180000
KS ci ratio: 1.419607e-01	ci left: 5.999160e-04	ci right 6.923940e-04	k: 761	n:1180000
CORO1B   1180000 perm   773 sec   (1527 perm/sec)   p_kst 6.449153e-04   p_cons 9.617525e-01   p_joint 2.448305e-03

Joint ci ratio: 7.249111e-02	ci left: 2.362382e-03	ci right 2.540893e-03	k: 2916	n:1190000
Cons ci ratio: 7.164070e-04	ci left: 9.614279e-01	ci right 9.621177e-01	k: 1144511	n:1190000
KS ci ratio: 1.410381e-01	ci left: 6.029807e-04	ci right 6.952762e-04	k: 771	n:1190000
CORO1B   1190000 perm   783 sec   (1519 perm/sec)   p_kst 6.478992e-04   p_cons 9.617739e-01   p_joint 2.450420e-03

Joint ci ratio: 1.060796e-01	ci left: 1.076358e-03	ci right 1.197737e-03	k: 1363	n:1200000
Cons ci ratio: 7.131306e-04	ci left: 9.614589e-01	ci right 9.621456e-01	k: 1154164	n:1200000
KS ci ratio: 1.404932e-01	ci left: 6.027797e-04	ci right 6.946582e-04	k: 777	n:1200000
CORO1B   1200000 perm   794 sec   (1511 perm/sec)   p_kst 6.475000e-04   p_cons 9.618033e-01   p_joint 1.135833e-03

Joint ci ratio: 1.058086e-01	ci left: 1.073095e-03	ci right 1.193777e-03	k: 1370	n:1210000
Cons ci ratio: 7.101619e-04	ci left: 9.614619e-01	ci right 9.621458e-01	k: 1163784	n:1210000
KS ci ratio: 1.401336e-01	ci left: 6.009878e-04	ci right 6.923390e-04	k: 781	n:1210000
CORO1B   1210000 perm   805 sec   (1502 perm/sec)   p_kst 6.454545e-04   p_cons 9.618050e-01   p_joint 1.132231e-03

Joint ci ratio: 1.054249e-01	ci left: 1.072279e-03	ci right 1.192405e-03	k: 1380	n:1220000
Cons ci ratio: 7.072378e-04	ci left: 9.614641e-01	ci right 9.621452e-01	k: 1173403	n:1220000
KS ci ratio: 1.395105e-01	ci left: 6.015986e-04	ci right 6.926024e-04	k: 788	n:1220000
CORO1B   1220000 perm   817 sec   (1494 perm/sec)   p_kst 6.459016e-04   p_cons 9.618057e-01   p_joint 1.131148e-03

Joint ci ratio: 1.048944e-01	ci left: 1.074644e-03	ci right 1.194392e-03	k: 1394	n:1230000
Cons ci ratio: 7.045133e-04	ci left: 9.614491e-01	ci right 9.621275e-01	k: 1183001	n:1230000
KS ci ratio: 1.386345e-01	ci left: 6.045549e-04	ci right 6.953842e-04	k: 798	n:1230000
CORO1B   1230000 perm   828 sec   (1485 perm/sec)   p_kst 6.487805e-04   p_cons 9.617894e-01   p_joint 1.133333e-03

Joint ci ratio: 1.042608e-01	ci left: 1.079329e-03	ci right 1.198827e-03	k: 1411	n:1240000
Cons ci ratio: 7.017505e-04	ci left: 9.614417e-01	ci right 9.621174e-01	k: 1192608	n:1240000
KS ci ratio: 1.377748e-01	ci left: 6.074652e-04	ci right 6.981193e-04	k: 808	n:1240000
CORO1B   1240000 perm   840 sec   (1477 perm/sec)   p_kst 6.516129e-04   p_cons 9.617806e-01   p_joint 1.137903e-03

Joint ci ratio: 7.217369e-02	ci left: 2.269408e-03	ci right 2.440111e-03	k: 2942	n:1250000
Cons ci ratio: 6.990657e-04	ci left: 9.614296e-01	ci right 9.621027e-01	k: 1202209	n:1250000
KS ci ratio: 1.372668e-01	ci left: 6.072403e-04	ci right 6.974994e-04	k: 814	n:1250000
CORO1B   1250000 perm   851 sec   (1469 perm/sec)   p_kst 6.512000e-04   p_cons 9.617672e-01   p_joint 2.353600e-03

Joint ci ratio: 7.174799e-02	ci left: 2.278675e-03	ci right 2.449022e-03	k: 2977	n:1260000
Cons ci ratio: 6.962385e-04	ci left: 9.614360e-01	ci right 9.621064e-01	k: 1211833	n:1260000
KS ci ratio: 1.365150e-01	ci left: 6.093192e-04	ci right 6.993510e-04	k: 823	n:1260000
CORO1B   1260000 perm   863 sec   (1461 perm/sec)   p_kst 6.531746e-04   p_cons 9.617722e-01   p_joint 2.362698e-03

Joint ci ratio: 7.147253e-02	ci left: 2.278519e-03	ci right 2.448173e-03	k: 3000	n:1270000
Cons ci ratio: 6.934898e-04	ci left: 9.614375e-01	ci right 9.621053e-01	k: 1221451	n:1270000
KS ci ratio: 1.360207e-01	ci left: 6.090848e-04	ci right 6.987297e-04	k: 829	n:1270000
CORO1B   1270000 perm   874 sec   (1453 perm/sec)   p_kst 6.527559e-04   p_cons 9.617724e-01   p_joint 2.362205e-03

Joint ci ratio: 1.024974e-01	ci left: 1.082891e-03	ci right 1.200635e-03	k: 1460	n:1280000
Cons ci ratio: 6.906928e-04	ci left: 9.614477e-01	ci right 9.621127e-01	k: 1231080	n:1280000
KS ci ratio: 1.355317e-01	ci left: 6.088546e-04	ci right 6.981175e-04	k: 835	n:1280000
CORO1B   1280000 perm   886 sec   (1445 perm/sec)   p_kst 6.523438e-04   p_cons 9.617813e-01   p_joint 1.140625e-03

Joint ci ratio: 1.022529e-01	ci left: 1.079784e-03	ci right 1.196893e-03	k: 1467	n:1290000
Cons ci ratio: 6.877624e-04	ci left: 9.614756e-01	ci right 9.621378e-01	k: 1240732	n:1290000
KS ci ratio: 1.352894e-01	ci left: 6.063815e-04	ci right 6.951101e-04	k: 838	n:1290000
CORO1B   1290000 perm   897 sec   (1438 perm/sec)   p_kst 6.496124e-04   p_cons 9.618078e-01   p_joint 1.137209e-03

Joint ci ratio: 1.020448e-01	ci left: 1.075976e-03	ci right 1.192419e-03	k: 1473	n:1300000
Cons ci ratio: 6.852703e-04	ci left: 9.614598e-01	ci right 9.621197e-01	k: 1250328	n:1300000
KS ci ratio: 1.351286e-01	ci left: 6.032034e-04	ci right 6.913537e-04	k: 840	n:1300000
CORO1B   1300000 perm   909 sec   (1430 perm/sec)   p_kst 6.461538e-04   p_cons 9.617908e-01   p_joint 1.133077e-03

Joint ci ratio: 1.018035e-01	ci left: 1.072969e-03	ci right 1.188797e-03	k: 1480	n:1310000
Cons ci ratio: 6.825356e-04	ci left: 9.614734e-01	ci right 9.621306e-01	k: 1259962	n:1310000
KS ci ratio: 1.348085e-01	ci left: 6.015491e-04	ci right 6.892327e-04	k: 844	n:1310000
CORO1B   1310000 perm   921 sec   (1422 perm/sec)   p_kst 6.442748e-04   p_cons 9.618031e-01   p_joint 1.129771e-03

Joint ci ratio: 1.013596e-01	ci left: 1.074439e-03	ci right 1.189889e-03	k: 1493	n:1320000
Cons ci ratio: 6.799876e-04	ci left: 9.614701e-01	ci right 9.621248e-01	k: 1269574	n:1320000
KS ci ratio: 1.339393e-01	ci left: 6.050452e-04	ci right 6.926244e-04	k: 855	n:1320000
CORO1B   1320000 perm   933 sec   (1414 perm/sec)   p_kst 6.477273e-04   p_cons 9.617985e-01   p_joint 1.131061e-03

Joint ci ratio: 1.008544e-01	ci left: 1.077354e-03	ci right 1.192506e-03	k: 1508	n:1330000
Cons ci ratio: 6.779113e-04	ci left: 9.614185e-01	ci right 9.620712e-01	k: 1279122	n:1330000
KS ci ratio: 1.331636e-01	ci left: 6.077636e-04	ci right 6.951865e-04	k: 865	n:1330000
CORO1B   1330000 perm   945 sec   (1407 perm/sec)   p_kst 6.503759e-04   p_cons 9.617459e-01   p_joint 1.133835e-03

Joint ci ratio: 1.002908e-01	ci left: 1.081681e-03	ci right 1.196612e-03	k: 1525	n:1340000
Cons ci ratio: 6.752432e-04	ci left: 9.614344e-01	ci right 9.620845e-01	k: 1288759	n:1340000
KS ci ratio: 1.324012e-01	ci left: 6.104429e-04	ci right 6.977089e-04	k: 875	n:1340000
CORO1B   1340000 perm   958 sec   (1399 perm/sec)   p_kst 6.529851e-04   p_cons 9.617604e-01   p_joint 1.138060e-03

Joint ci ratio: 9.996388e-02	ci left: 1.080891e-03	ci right 1.195341e-03	k: 1535	n:1350000
Cons ci ratio: 6.726468e-04	ci left: 9.614456e-01	ci right 9.620932e-01	k: 1298390	n:1350000
KS ci ratio: 1.318006e-01	ci left: 6.116512e-04	ci right 6.986624e-04	k: 883	n:1350000
CORO1B   1350000 perm   970 sec   (1392 perm/sec)   p_kst 6.540741e-04   p_cons 9.617704e-01   p_joint 1.137037e-03

Joint ci ratio: 9.957564e-02	ci left: 1.081546e-03	ci right 1.195595e-03	k: 1547	n:1360000
Cons ci ratio: 6.703013e-04	ci left: 9.614322e-01	ci right 9.620776e-01	k: 1307988	n:1360000
KS ci ratio: 1.312819e-01	ci left: 6.121315e-04	ci right 6.988415e-04	k: 890	n:1360000
CORO1B   1360000 perm   982 sec   (1385 perm/sec)   p_kst 6.544118e-04   p_cons 9.617559e-01   p_joint 1.137500e-03

Joint ci ratio: 9.935143e-02	ci left: 1.078634e-03	ci right 1.192105e-03	k: 1554	n:1370000
Cons ci ratio: 6.678210e-04	ci left: 9.614366e-01	ci right 9.620796e-01	k: 1317610	n:1370000
KS ci ratio: 1.310616e-01	ci left: 6.097812e-04	ci right 6.960021e-04	k: 893	n:1370000
CORO1B   1370000 perm   994 sec   (1378 perm/sec)   p_kst 6.518248e-04   p_cons 9.617591e-01   p_joint 1.134307e-03

Joint ci ratio: 9.903355e-02	ci left: 1.077885e-03	ci right 1.190893e-03	k: 1564	n:1380000
Cons ci ratio: 6.652959e-04	ci left: 9.614490e-01	ci right 9.620896e-01	k: 1327243	n:1380000
KS ci ratio: 1.308424e-01	ci left: 6.074652e-04	ci right 6.932037e-04	k: 896	n:1380000
CORO1B   1380000 perm   1007 sec   (1371 perm/sec)   p_kst 6.492754e-04   p_cons 9.617703e-01   p_joint 1.133333e-03

Joint ci ratio: 6.705624e-02	ci left: 2.370262e-03	ci right 2.535419e-03	k: 3408	n:1390000
Cons ci ratio: 6.627862e-04	ci left: 9.614627e-01	ci right 9.621009e-01	k: 1336878	n:1390000
KS ci ratio: 1.301189e-01	ci left: 6.100544e-04	ci right 6.956455e-04	k: 906	n:1390000
CORO1B   1390000 perm   1019 sec   (1364 perm/sec)   p_kst 6.517986e-04   p_cons 9.617827e-01   p_joint 2.451799e-03

Joint ci ratio: 6.685074e-02	ci left: 2.368081e-03	ci right 2.532560e-03	k: 3429	n:1400000
Cons ci ratio: 6.603367e-04	ci left: 9.614726e-01	ci right 9.621084e-01	k: 1346508	n:1400000
KS ci ratio: 1.298331e-01	ci left: 6.084611e-04	ci right 6.936267e-04	k: 910	n:1400000
CORO1B   1400000 perm   1032 sec   (1357 perm/sec)   p_kst 6.500000e-04   p_cons 9.617914e-01   p_joint 2.449286e-03

Joint ci ratio: 9.797500e-02	ci left: 1.078470e-03	ci right 1.190262e-03	k: 1598	n:1410000
Cons ci ratio: 6.579713e-04	ci left: 9.614759e-01	ci right 9.621094e-01	k: 1356129	n:1410000
KS ci ratio: 1.295491e-01	ci left: 6.068906e-04	ci right 6.916362e-04	k: 914	n:1410000
CORO1B   1410000 perm   1044 sec   (1350 perm/sec)   p_kst 6.482270e-04   p_cons 9.617936e-01   p_joint 1.133333e-03

Joint ci ratio: 9.760940e-02	ci left: 1.079119e-03	ci right 1.190537e-03	k: 1610	n:1420000
Cons ci ratio: 6.555557e-04	ci left: 9.614877e-01	ci right 9.621189e-01	k: 1365762	n:1420000
KS ci ratio: 1.292670e-01	ci left: 6.053424e-04	ci right 6.896736e-04	k: 918	n:1420000
CORO1B   1420000 perm   1057 sec   (1343 perm/sec)   p_kst 6.464789e-04   p_cons 9.618042e-01   p_joint 1.133803e-03

Joint ci ratio: 6.726655e-02	ci left: 2.289519e-03	ci right 2.449570e-03	k: 3387	n:1430000
Cons ci ratio: 6.532349e-04	ci left: 9.614916e-01	ci right 9.621205e-01	k: 1375384	n:1430000
KS ci ratio: 1.288471e-01	ci left: 6.051695e-04	ci right 6.891820e-04	k: 924	n:1430000
CORO1B   1430000 perm   1070 sec   (1336 perm/sec)   p_kst 6.461538e-04   p_cons 9.618070e-01   p_joint 2.368531e-03

Joint ci ratio: 6.697055e-02	ci left: 2.294104e-03	ci right 2.453742e-03	k: 3417	n:1440000
Cons ci ratio: 6.510862e-04	ci left: 9.614787e-01	ci right 9.621056e-01	k: 1384982	n:1440000
KS ci ratio: 1.278826e-01	ci left: 6.103771e-04	ci right 6.944301e-04	k: 938	n:1440000
CORO1B   1440000 perm   1083 sec   (1330 perm/sec)   p_kst 6.513889e-04   p_cons 9.617931e-01   p_joint 2.372917e-03

Joint ci ratio: 6.678529e-02	ci left: 2.291167e-03	ci right 2.450142e-03	k: 3436	n:1450000
Cons ci ratio: 6.487819e-04	ci left: 9.614861e-01	ci right 9.621107e-01	k: 1394609	n:1450000
KS ci ratio: 1.274086e-01	ci left: 6.108410e-04	ci right 6.946226e-04	k: 945	n:1450000
CORO1B   1450000 perm   1096 sec   (1323 perm/sec)   p_kst 6.517241e-04   p_cons 9.617993e-01   p_joint 2.369655e-03

Joint ci ratio: 6.655332e-02	ci left: 2.291638e-03	ci right 2.450072e-03	k: 3460	n:1460000
Cons ci ratio: 6.465502e-04	ci left: 9.614878e-01	ci right 9.621103e-01	k: 1404228	n:1460000
KS ci ratio: 1.267403e-01	ci left: 6.132888e-04	ci right 6.969317e-04	k: 955	n:1460000
CORO1B   1460000 perm   1109 sec   (1316 perm/sec)   p_kst 6.541096e-04   p_cons 9.618000e-01   p_joint 2.369863e-03

Joint ci ratio: 6.625709e-02	ci left: 2.296787e-03	ci right 2.454844e-03	k: 3491	n:1470000
Cons ci ratio: 6.443771e-04	ci left: 9.614855e-01	ci right 9.621059e-01	k: 1413841	n:1470000
KS ci ratio: 1.262133e-01	ci left: 6.143868e-04	ci right 6.978050e-04	k: 963	n:1470000
CORO1B   1470000 perm   1122 sec   (1310 perm/sec)   p_kst 6.551020e-04   p_cons 9.617966e-01   p_joint 2.374830e-03

Joint ci ratio: 6.604940e-02	ci left: 2.295887e-03	ci right 2.453368e-03	k: 3513	n:1480000
Cons ci ratio: 6.421312e-04	ci left: 9.614940e-01	ci right 9.621123e-01	k: 1423470	n:1480000
KS ci ratio: 1.256927e-01	ci left: 6.154707e-04	ci right 6.986657e-04	k: 971	n:1480000
CORO1B   1480000 perm   1136 sec   (1303 perm/sec)   p_kst 6.560811e-04   p_cons 9.618041e-01   p_joint 2.373649e-03

Joint ci ratio: 6.586232e-02	ci left: 2.293680e-03	ci right 2.450546e-03	k: 3533	n:1490000
Cons ci ratio: 6.399847e-04	ci left: 9.614937e-01	ci right 9.621099e-01	k: 1433086	n:1490000
KS ci ratio: 1.253066e-01	ci left: 6.152404e-04	ci right 6.981298e-04	k: 977	n:1490000
CORO1B   1490000 perm   1149 sec   (1297 perm/sec)   p_kst 6.557047e-04   p_cons 9.618027e-01   p_joint 2.371141e-03

Joint ci ratio: 6.557517e-02	ci left: 2.298716e-03	ci right 2.455215e-03	k: 3564	n:1500000
Cons ci ratio: 6.379348e-04	ci left: 9.614847e-01	ci right 9.620989e-01	k: 1442689	n:1500000
KS ci ratio: 1.245446e-01	ci left: 6.188889e-04	ci right 7.017254e-04	k: 989	n:1500000
CORO1B   1500000 perm   1162 sec   (1291 perm/sec)   p_kst 6.593333e-04   p_cons 9.617927e-01   p_joint 2.376000e-03

Joint ci ratio: 6.532819e-02	ci left: 2.301081e-03	ci right 2.457129e-03	k: 3591	n:1510000
Cons ci ratio: 6.357669e-04	ci left: 9.614917e-01	ci right 9.621039e-01	k: 1452316	n:1510000
KS ci ratio: 1.242314e-01	ci left: 6.179985e-04	ci right 7.004925e-04	k: 994	n:1510000
CORO1B   1510000 perm   1176 sec   (1284 perm/sec)   p_kst 6.582781e-04   p_cons 9.617987e-01   p_joint 2.378146e-03

Joint ci ratio: 6.508397e-02	ci left: 2.303416e-03	ci right 2.459016e-03	k: 3618	n:1520000
Cons ci ratio: 6.337230e-04	ci left: 9.614868e-01	ci right 9.620970e-01	k: 1461925	n:1520000
KS ci ratio: 1.239825e-01	ci left: 6.164826e-04	ci right 6.985973e-04	k: 998	n:1520000
CORO1B   1520000 perm   1189 sec   (1279 perm/sec)   p_kst 6.565789e-04   p_cons 9.617928e-01   p_joint 2.380263e-03

Joint ci ratio: 6.476239e-02	ci left: 2.311509e-03	ci right 2.466855e-03	k: 3654	n:1530000
Cons ci ratio: 6.316145e-04	ci left: 9.614918e-01	ci right 9.620999e-01	k: 1471549	n:1530000
KS ci ratio: 1.236119e-01	ci left: 6.162534e-04	ci right 6.980742e-04	k: 1004	n:1530000
CORO1B   1530000 perm   1202 sec   (1273 perm/sec)   p_kst 6.562092e-04   p_cons 9.617967e-01   p_joint 2.388235e-03

Joint ci ratio: 6.463009e-02	ci left: 2.306081e-03	ci right 2.460735e-03	k: 3669	n:1540000
Cons ci ratio: 6.295491e-04	ci left: 9.614941e-01	ci right 9.621002e-01	k: 1481169	n:1540000
KS ci ratio: 1.233667e-01	ci left: 6.147689e-04	ci right 6.962189e-04	k: 1008	n:1540000
CORO1B   1540000 perm   1216 sec   (1267 perm/sec)   p_kst 6.545455e-04   p_cons 9.617981e-01   p_joint 2.382468e-03

Joint ci ratio: 6.443729e-02	ci left: 2.305168e-03	ci right 2.459282e-03	k: 3691	n:1550000
Cons ci ratio: 6.275810e-04	ci left: 9.614873e-01	ci right 9.620916e-01	k: 1490775	n:1550000
KS ci ratio: 1.230016e-01	ci left: 6.145543e-04	ci right 6.957174e-04	k: 1014	n:1550000
CORO1B   1550000 perm   1229 sec   (1261 perm/sec)   p_kst 6.541935e-04   p_cons 9.617903e-01   p_joint 2.381290e-03

Joint ci ratio: 6.428090e-02	ci left: 2.301744e-03	ci right 2.455241e-03	k: 3709	n:1560000
Cons ci ratio: 6.256367e-04	ci left: 9.614800e-01	ci right 9.620824e-01	k: 1500380	n:1560000
KS ci ratio: 1.226998e-01	ci left: 6.137215e-04	ci right 6.945612e-04	k: 1019	n:1560000
CORO1B   1560000 perm   1242 sec   (1256 perm/sec)   p_kst 6.532051e-04   p_cons 9.617821e-01   p_joint 2.377564e-03

Joint ci ratio: 6.403961e-02	ci left: 2.304631e-03	ci right 2.457723e-03	k: 3737	n:1570000
Cons ci ratio: 6.235968e-04	ci left: 9.614862e-01	ci right 9.620866e-01	k: 1510006	n:1570000
KS ci ratio: 1.223405e-01	ci left: 6.135170e-04	ci right 6.940760e-04	k: 1025	n:1570000
CORO1B   1570000 perm   1256 sec   (1250 perm/sec)   p_kst 6.528662e-04   p_cons 9.617873e-01   p_joint 2.380255e-03

Joint ci ratio: 6.376708e-02	ci left: 2.309975e-03	ci right 2.462744e-03	k: 3769	n:1580000
Cons ci ratio: 6.215446e-04	ci left: 9.614961e-01	ci right 9.620946e-01	k: 1519638	n:1580000
KS ci ratio: 1.221028e-01	ci left: 6.120882e-04	ci right 6.922922e-04	k: 1029	n:1580000
CORO1B   1580000 perm   1270 sec   (1244 perm/sec)   p_kst 6.512658e-04   p_cons 9.617962e-01   p_joint 2.385443e-03

Joint ci ratio: 6.360709e-02	ci left: 2.307206e-03	ci right 2.459395e-03	k: 3788	n:1590000
Cons ci ratio: 6.196186e-04	ci left: 9.614933e-01	ci right 9.620899e-01	k: 1529250	n:1590000
KS ci ratio: 1.217488e-01	ci left: 6.118971e-04	ci right 6.918267e-04	k: 1035	n:1590000
CORO1B   1590000 perm   1283 sec   (1239 perm/sec)   p_kst 6.509434e-04   p_cons 9.617925e-01   p_joint 2.382390e-03

Joint ci ratio: 6.339826e-02	ci left: 2.308163e-03	ci right 2.459897e-03	k: 3813	n:1600000
Cons ci ratio: 6.177261e-04	ci left: 9.614887e-01	ci right 9.620834e-01	k: 1538859	n:1600000
KS ci ratio: 1.212813e-01	ci left: 6.129207e-04	ci right 6.926547e-04	k: 1043	n:1600000
CORO1B   1600000 perm   1297 sec   (1233 perm/sec)   p_kst 6.518750e-04   p_cons 9.617869e-01   p_joint 2.383125e-03

Joint ci ratio: 9.168307e-02	ci left: 1.082153e-03	ci right 1.186736e-03	k: 1825	n:1610000
Cons ci ratio: 6.158248e-04	ci left: 9.614872e-01	ci right 9.620801e-01	k: 1548473	n:1610000
KS ci ratio: 1.210498e-01	ci left: 6.115229e-04	ci right 6.909123e-04	k: 1047	n:1610000
CORO1B   1610000 perm   1311 sec   (1228 perm/sec)   p_kst 6.503106e-04   p_cons 9.617845e-01   p_joint 1.133540e-03

Joint ci ratio: 6.306855e-02	ci left: 2.303968e-03	ci right 2.454610e-03	k: 3853	n:1620000
Cons ci ratio: 6.140698e-04	ci left: 9.614702e-01	ci right 9.620614e-01	k: 1558062	n:1620000
KS ci ratio: 1.207047e-01	ci left: 6.113398e-04	ci right 6.904630e-04	k: 1053	n:1620000
CORO1B   1620000 perm   1325 sec   (1223 perm/sec)   p_kst 6.500000e-04   p_cons 9.617667e-01   p_joint 2.378395e-03

Joint ci ratio: 6.293005e-02	ci left: 2.300098e-03	ci right 2.450145e-03	k: 3870	n:1630000
Cons ci ratio: 6.121815e-04	ci left: 9.614714e-01	ci right 9.620607e-01	k: 1567680	n:1630000
KS ci ratio: 1.205905e-01	ci left: 6.087792e-04	ci right 6.874911e-04	k: 1055	n:1630000
CORO1B   1630000 perm   1340 sec   (1217 perm/sec)   p_kst 6.472393e-04   p_cons 9.617669e-01   p_joint 2.374233e-03

Joint ci ratio: 6.174273e-02	ci left: 2.376114e-03	ci right 2.528091e-03	k: 4020	n:1640000
Cons ci ratio: 6.103004e-04	ci left: 9.614737e-01	ci right 9.620613e-01	k: 1577300	n:1640000
KS ci ratio: 1.203629e-01	ci left: 6.074326e-04	ci right 6.858116e-04	k: 1059	n:1640000
CORO1B   1640000 perm   1354 sec   (1211 perm/sec)   p_kst 6.457317e-04   p_cons 9.617683e-01   p_joint 2.451220e-03

Joint ci ratio: 9.071956e-02	ci left: 1.079016e-03	ci right 1.182142e-03	k: 1864	n:1650000
Cons ci ratio: 6.084516e-04	ci left: 9.614742e-01	ci right 9.620600e-01	k: 1586917	n:1650000
KS ci ratio: 1.199674e-01	ci left: 6.078661e-04	ci right 6.860251e-04	k: 1066	n:1650000
CORO1B   1650000 perm   1368 sec   (1206 perm/sec)   p_kst 6.460606e-04   p_cons 9.617679e-01   p_joint 1.129697e-03

Joint ci ratio: 9.038089e-02	ci left: 1.080759e-03	ci right 1.183645e-03	k: 1878	n:1660000
Cons ci ratio: 6.065897e-04	ci left: 9.614783e-01	ci right 9.620623e-01	k: 1596540	n:1660000
KS ci ratio: 1.195758e-01	ci left: 6.082948e-04	ci right 6.862355e-04	k: 1073	n:1660000
CORO1B   1660000 perm   1383 sec   (1200 perm/sec)   p_kst 6.463855e-04   p_cons 9.617711e-01   p_joint 1.131325e-03

Joint ci ratio: 6.218750e-02	ci left: 2.299823e-03	ci right 2.448018e-03	k: 3963	n:1670000
Cons ci ratio: 6.047005e-04	ci left: 9.614878e-01	ci right 9.620699e-01	k: 1606172	n:1670000
KS ci ratio: 1.191329e-01	ci left: 6.092997e-04	ci right 6.870597e-04	k: 1081	n:1670000
CORO1B   1670000 perm   1398 sec   (1195 perm/sec)   p_kst 6.473054e-04   p_cons 9.617796e-01   p_joint 2.373054e-03

Joint ci ratio: 6.201567e-02	ci left: 2.299026e-03	ci right 2.446746e-03	k: 3985	n:1680000
Cons ci ratio: 6.028971e-04	ci left: 9.614887e-01	ci right 9.620692e-01	k: 1615790	n:1680000
KS ci ratio: 1.188586e-01	ci left: 6.085605e-04	ci right 6.860348e-04	k: 1086	n:1680000
CORO1B   1680000 perm   1413 sec   (1189 perm/sec)   p_kst 6.464286e-04   p_cons 9.617798e-01   p_joint 2.372024e-03

Joint ci ratio: 6.190723e-02	ci left: 2.293578e-03	ci right 2.440680e-03	k: 3999	n:1690000
Cons ci ratio: 6.010903e-04	ci left: 9.614921e-01	ci right 9.620708e-01	k: 1625412	n:1690000
KS ci ratio: 1.187496e-01	ci left: 6.061078e-04	ci right 6.831940e-04	k: 1088	n:1690000
CORO1B   1690000 perm   1427 sec   (1184 perm/sec)   p_kst 6.437870e-04   p_cons 9.617822e-01   p_joint 2.366272e-03

Joint ci ratio: 6.173002e-02	ci left: 2.293406e-03	ci right 2.440062e-03	k: 4022	n:1700000
Cons ci ratio: 5.994100e-04	ci left: 9.614819e-01	ci right 9.620589e-01	k: 1635011	n:1700000
KS ci ratio: 1.184238e-01	ci left: 6.059672e-04	ci right 6.828093e-04	k: 1094	n:1700000
CORO1B   1700000 perm   1442 sec   (1179 perm/sec)   p_kst 6.435294e-04   p_cons 9.617712e-01   p_joint 2.365882e-03

Joint ci ratio: 6.052825e-02	ci left: 2.372711e-03	ci right 2.521380e-03	k: 4183	n:1710000
Cons ci ratio: 5.978293e-04	ci left: 9.614612e-01	ci right 9.620367e-01	k: 1644592	n:1710000
KS ci ratio: 1.178866e-01	ci left: 6.080987e-04	ci right 6.848369e-04	k: 1104	n:1710000
CORO1B   1710000 perm   1457 sec   (1174 perm/sec)   p_kst 6.456140e-04   p_cons 9.617497e-01   p_joint 2.446199e-03

Joint ci ratio: 6.029081e-02	ci left: 2.377812e-03	ci right 2.526197e-03	k: 4216	n:1720000
Cons ci ratio: 5.961618e-04	ci left: 9.614530e-01	ci right 9.620269e-01	k: 1654194	n:1720000
KS ci ratio: 1.174093e-01	ci left: 6.096418e-04	ci right 6.862418e-04	k: 1113	n:1720000
CORO1B   1720000 perm   1472 sec   (1168 perm/sec)   p_kst 6.470930e-04   p_cons 9.617407e-01   p_joint 2.451163e-03

Joint ci ratio: 6.012709e-02	ci left: 2.377162e-03	ci right 2.525089e-03	k: 4239	n:1730000
Cons ci ratio: 5.942981e-04	ci left: 9.614710e-01	ci right 9.620431e-01	k: 1663841	n:1730000
KS ci ratio: 1.169900e-01	ci left: 6.106066e-04	ci right 6.870348e-04	k: 1121	n:1730000
CORO1B   1730000 perm   1487 sec   (1163 perm/sec)   p_kst 6.479769e-04   p_cons 9.617578e-01   p_joint 2.450289e-03

Joint ci ratio: 5.992243e-02	ci left: 2.379917e-03	ci right 2.527494e-03	k: 4268	n:1740000
Cons ci ratio: 5.925998e-04	ci left: 9.614703e-01	ci right 9.620408e-01	k: 1673456	n:1740000
KS ci ratio: 1.167302e-01	ci left: 6.098869e-04	ci right 6.860439e-04	k: 1126	n:1740000
CORO1B   1740000 perm   1503 sec   (1158 perm/sec)   p_kst 6.471264e-04   p_cons 9.617563e-01   p_joint 2.452874e-03

Joint ci ratio: 5.976867e-02	ci left: 2.378701e-03	ci right 2.525811e-03	k: 4290	n:1750000
Cons ci ratio: 5.908655e-04	ci left: 9.614760e-01	ci right 9.620448e-01	k: 1683082	n:1750000
KS ci ratio: 1.163694e-01	ci left: 6.102853e-04	ci right 6.862402e-04	k: 1133	n:1750000
CORO1B   1750000 perm   1518 sec   (1153 perm/sec)   p_kst 6.474286e-04   p_cons 9.617611e-01   p_joint 2.451429e-03

Joint ci ratio: 6.065400e-02	ci left: 2.295789e-03	ci right 2.439948e-03	k: 4166	n:1760000
Cons ci ratio: 5.891144e-04	ci left: 9.614856e-01	ci right 9.620527e-01	k: 1692715	n:1760000
KS ci ratio: 1.159610e-01	ci left: 6.112311e-04	ci right 6.870185e-04	k: 1141	n:1760000
CORO1B   1760000 perm   1533 sec   (1148 perm/sec)   p_kst 6.482955e-04   p_cons 9.617699e-01   p_joint 2.367045e-03

Joint ci ratio: 5.947841e-02	ci left: 2.375198e-03	ci right 2.521353e-03	k: 4332	n:1770000
Cons ci ratio: 5.875323e-04	ci left: 9.614758e-01	ci right 9.620414e-01	k: 1702314	n:1770000
KS ci ratio: 1.156072e-01	ci left: 6.116181e-04	ci right 6.872063e-04	k: 1148	n:1770000
CORO1B   1770000 perm   1549 sec   (1143 perm/sec)   p_kst 6.485876e-04   p_cons 9.617593e-01   p_joint 2.447458e-03

Joint ci ratio: 8.742970e-02	ci left: 1.078759e-03	ci right 1.177931e-03	k: 2007	n:1780000
Cons ci ratio: 5.857703e-04	ci left: 9.614903e-01	ci right 9.620542e-01	k: 1711956	n:1780000
KS ci ratio: 1.152566e-01	ci left: 6.120011e-04	ci right 6.873917e-04	k: 1155	n:1780000
CORO1B   1780000 perm   1564 sec   (1138 perm/sec)   p_kst 6.488764e-04   p_cons 9.617730e-01   p_joint 1.127528e-03

Joint ci ratio: 8.723448e-02	ci left: 1.077651e-03	ci right 1.176488e-03	k: 2016	n:1790000
Cons ci ratio: 5.842238e-04	ci left: 9.614795e-01	ci right 9.620419e-01	k: 1721553	n:1790000
KS ci ratio: 1.149092e-01	ci left: 6.123802e-04	ci right 6.875747e-04	k: 1162	n:1790000
CORO1B   1790000 perm   1579 sec   (1133 perm/sec)   p_kst 6.491620e-04   p_cons 9.617615e-01   p_joint 1.126257e-03

Joint ci ratio: 8.701906e-02	ci left: 1.077098e-03	ci right 1.175629e-03	k: 2026	n:1800000
Cons ci ratio: 5.825002e-04	ci left: 9.614928e-01	ci right 9.620535e-01	k: 1731193	n:1800000
KS ci ratio: 1.145650e-01	ci left: 6.127554e-04	ci right 6.877552e-04	k: 1169	n:1800000
CORO1B   1800000 perm   1595 sec   (1129 perm/sec)   p_kst 6.494444e-04   p_cons 9.617739e-01   p_joint 1.125556e-03

Joint ci ratio: 8.676260e-02	ci left: 1.077633e-03	ci right 1.175908e-03	k: 2038	n:1810000
Cons ci ratio: 5.808309e-04	ci left: 9.615009e-01	ci right 9.620601e-01	k: 1740824	n:1810000
KS ci ratio: 1.142723e-01	ci left: 6.125900e-04	ci right 6.873652e-04	k: 1175	n:1810000
CORO1B   1810000 perm   1610 sec   (1124 perm/sec)   p_kst 6.491713e-04   p_cons 9.617812e-01   p_joint 1.125967e-03

Joint ci ratio: 5.866496e-02	ci left: 2.375447e-03	ci right 2.519550e-03	k: 4453	n:1820000
Cons ci ratio: 5.793837e-04	ci left: 9.614825e-01	ci right 9.620402e-01	k: 1750407	n:1820000
KS ci ratio: 1.139337e-01	ci left: 6.129605e-04	ci right 6.875444e-04	k: 1182	n:1820000
CORO1B   1820000 perm   1626 sec   (1120 perm/sec)   p_kst 6.494505e-04   p_cons 9.617621e-01   p_joint 2.446703e-03

Joint ci ratio: 8.627735e-02	ci left: 1.078152e-03	ci right 1.175896e-03	k: 2061	n:1830000
Cons ci ratio: 5.777368e-04	ci left: 9.614911e-01	ci right 9.620473e-01	k: 1760039	n:1830000
KS ci ratio: 1.136938e-01	ci left: 6.122655e-04	ci right 6.865973e-04	k: 1187	n:1830000
CORO1B   1830000 perm   1642 sec   (1115 perm/sec)   p_kst 6.486339e-04   p_cons 9.617699e-01   p_joint 1.126230e-03

Joint ci ratio: 8.604815e-02	ci left: 1.078142e-03	ci right 1.175613e-03	k: 2072	n:1840000
Cons ci ratio: 5.762358e-04	ci left: 9.614828e-01	ci right 9.620375e-01	k: 1769640	n:1840000
KS ci ratio: 1.133129e-01	ci left: 6.131623e-04	ci right 6.873370e-04	k: 1195	n:1840000
CORO1B   1840000 perm   1658 sec   (1110 perm/sec)   p_kst 6.494565e-04   p_cons 9.617609e-01   p_joint 1.126087e-03

Joint ci ratio: 8.577956e-02	ci left: 1.079191e-03	ci right 1.176436e-03	k: 2085	n:1850000
Cons ci ratio: 5.746704e-04	ci left: 9.614843e-01	ci right 9.620375e-01	k: 1779259	n:1850000
KS ci ratio: 1.130768e-01	ci left: 6.124741e-04	ci right 6.864009e-04	k: 1200	n:1850000
CORO1B   1850000 perm   1674 sec   (1105 perm/sec)   p_kst 6.486486e-04   p_cons 9.617616e-01   p_joint 1.127027e-03

Joint ci ratio: 8.547272e-02	ci left: 1.081280e-03	ci right 1.178348e-03	k: 2100	n:1860000
Cons ci ratio: 5.729752e-04	ci left: 9.615041e-01	ci right 9.620557e-01	k: 1788912	n:1860000
KS ci ratio: 1.125159e-01	ci left: 6.154509e-04	ci right 6.893440e-04	k: 1212	n:1860000
CORO1B   1860000 perm   1689 sec   (1101 perm/sec)   p_kst 6.516129e-04   p_cons 9.617806e-01   p_joint 1.129032e-03

Joint ci ratio: 8.508866e-02	ci left: 1.085442e-03	ci right 1.182424e-03	k: 2119	n:1870000
Cons ci ratio: 5.714237e-04	ci left: 9.615071e-01	ci right 9.620572e-01	k: 1798534	n:1870000
KS ci ratio: 1.121007e-01	ci left: 6.168374e-04	ci right 6.906056e-04	k: 1221	n:1870000
CORO1B   1870000 perm   1705 sec   (1097 perm/sec)   p_kst 6.529412e-04   p_cons 9.617829e-01   p_joint 1.133155e-03

Joint ci ratio: 8.494863e-02	ci left: 1.083313e-03	ci right 1.179937e-03	k: 2126	n:1880000
Cons ci ratio: 5.699094e-04	ci left: 9.615069e-01	ci right 9.620555e-01	k: 1808150	n:1880000
KS ci ratio: 1.119178e-01	ci left: 6.156244e-04	ci right 6.891195e-04	k: 1225	n:1880000
CORO1B   1880000 perm   1721 sec   (1092 perm/sec)   p_kst 6.515957e-04   p_cons 9.617819e-01   p_joint 1.130851e-03

Joint ci ratio: 8.469018e-02	ci left: 1.084313e-03	ci right 1.180718e-03	k: 2139	n:1890000
Cons ci ratio: 5.683704e-04	ci left: 9.615114e-01	ci right 9.620586e-01	k: 1817775	n:1890000
KS ci ratio: 1.115544e-01	ci left: 6.164816e-04	ci right 6.898244e-04	k: 1233	n:1890000
CORO1B   1890000 perm   1738 sec   (1088 perm/sec)   p_kst 6.523810e-04   p_cons 9.617857e-01   p_joint 1.131746e-03

Joint ci ratio: 8.441445e-02	ci left: 1.085819e-03	ci right 1.182028e-03	k: 2153	n:1900000
Cons ci ratio: 5.668234e-04	ci left: 9.615186e-01	ci right 9.620642e-01	k: 1827405	n:1900000
KS ci ratio: 1.112393e-01	ci left: 6.168185e-04	ci right 6.899805e-04	k: 1240	n:1900000
CORO1B   1900000 perm   1755 sec   (1083 perm/sec)   p_kst 6.526316e-04   p_cons 9.617921e-01   p_joint 1.133158e-03

Joint ci ratio: 8.431678e-02	ci left: 1.082697e-03	ci right 1.178512e-03	k: 2158	n:1910000
Cons ci ratio: 5.652648e-04	ci left: 9.615288e-01	ci right 9.620730e-01	k: 1837041	n:1910000
KS ci ratio: 1.110159e-01	ci left: 6.161341e-04	ci right 6.890586e-04	k: 1245	n:1910000
CORO1B   1910000 perm   1771 sec   (1078 perm/sec)   p_kst 6.518325e-04   p_cons 9.618016e-01   p_joint 1.129843e-03

Joint ci ratio: 8.408342e-02	ci left: 1.083176e-03	ci right 1.178756e-03	k: 2170	n:1920000
Cons ci ratio: 5.638268e-04	ci left: 9.615248e-01	ci right 9.620676e-01	k: 1846650	n:1920000
KS ci ratio: 1.107939e-01	ci left: 6.154570e-04	ci right 6.881462e-04	k: 1250	n:1920000
CORO1B   1920000 perm   1788 sec   (1074 perm/sec)   p_kst 6.510417e-04   p_cons 9.617969e-01   p_joint 1.130208e-03

Joint ci ratio: 8.383276e-02	ci left: 1.084158e-03	ci right 1.179525e-03	k: 2183	n:1930000
Cons ci ratio: 5.625623e-04	ci left: 9.614995e-01	ci right 9.620411e-01	k: 1856218	n:1930000
KS ci ratio: 1.105292e-01	ci left: 6.152909e-04	ci right 6.877755e-04	k: 1256	n:1930000
CORO1B   1930000 perm   1805 sec   (1069 perm/sec)   p_kst 6.507772e-04   p_cons 9.617710e-01   p_joint 1.131088e-03

Joint ci ratio: 8.371796e-02	ci left: 1.081597e-03	ci right 1.176603e-03	k: 2189	n:1940000
Cons ci ratio: 5.611015e-04	ci left: 9.615014e-01	ci right 9.620416e-01	k: 1865838	n:1940000
KS ci ratio: 1.103100e-01	ci left: 6.146254e-04	ci right 6.868787e-04	k: 1261	n:1940000
CORO1B   1940000 perm   1821 sec   (1065 perm/sec)   p_kst 6.500000e-04   p_cons 9.617722e-01   p_joint 1.128351e-03

Joint ci ratio: 8.347054e-02	ci left: 1.082578e-03	ci right 1.177375e-03	k: 2202	n:1950000
Cons ci ratio: 5.597418e-04	ci left: 9.614914e-01	ci right 9.620303e-01	k: 1875435	n:1950000
KS ci ratio: 1.100053e-01	ci left: 6.149643e-04	ci right 6.870449e-04	k: 1268	n:1950000
CORO1B   1950000 perm   1838 sec   (1061 perm/sec)   p_kst 6.502564e-04   p_cons 9.617615e-01   p_joint 1.129231e-03

Joint ci ratio: 8.326294e-02	ci left: 1.082550e-03	ci right 1.177097e-03	k: 2213	n:1960000
Cons ci ratio: 5.583299e-04	ci left: 9.614898e-01	ci right 9.620272e-01	k: 1885048	n:1960000
KS ci ratio: 1.097893e-01	ci left: 6.143077e-04	ci right 6.861606e-04	k: 1273	n:1960000
CORO1B   1960000 perm   1855 sec   (1056 perm/sec)   p_kst 6.494898e-04   p_cons 9.617592e-01   p_joint 1.129082e-03

Joint ci ratio: 8.309427e-02	ci left: 1.081528e-03	ci right 1.175786e-03	k: 2222	n:1970000
Cons ci ratio: 5.568748e-04	ci left: 9.614952e-01	ci right 9.620313e-01	k: 1894675	n:1970000
KS ci ratio: 1.097034e-01	ci left: 6.121767e-04	ci right 6.837207e-04	k: 1275	n:1970000
CORO1B   1970000 perm   1872 sec   (1052 perm/sec)   p_kst 6.472081e-04   p_cons 9.617640e-01   p_joint 1.127919e-03

Joint ci ratio: 8.298246e-02	ci left: 1.079033e-03	ci right 1.172941e-03	k: 2228	n:1980000
Cons ci ratio: 5.554349e-04	ci left: 9.615002e-01	ci right 9.620349e-01	k: 1904301	n:1980000
KS ci ratio: 1.094464e-01	ci left: 6.120321e-04	ci right 6.833809e-04	k: 1281	n:1980000
CORO1B   1980000 perm   1889 sec   (1048 perm/sec)   p_kst 6.469697e-04   p_cons 9.617682e-01   p_joint 1.125253e-03

Joint ci ratio: 8.288968e-02	ci left: 1.076071e-03	ci right 1.169611e-03	k: 2233	n:1990000
Cons ci ratio: 5.541613e-04	ci left: 9.614844e-01	ci right 9.620178e-01	k: 1913886	n:1990000
KS ci ratio: 1.092761e-01	ci left: 6.109116e-04	ci right 6.820119e-04	k: 1285	n:1990000
CORO1B   1990000 perm   1906 sec   (1044 perm/sec)   p_kst 6.457286e-04   p_cons 9.617518e-01   p_joint 1.122111e-03

Joint ci ratio: 8.263111e-02	ci left: 1.077546e-03	ci right 1.170908e-03	k: 2247	n:2000000
Cons ci ratio: 5.527798e-04	ci left: 9.614843e-01	ci right 9.620164e-01	k: 1923502	n:2000000
KS ci ratio: 1.088536e-01	ci left: 6.127207e-04	ci right 6.837381e-04	k: 1295	n:2000000
CORO1B   2000000 perm   1923 sec   (1040 perm/sec)   p_kst 6.475000e-04   p_cons 9.617510e-01   p_joint 1.123500e-03

Joint ci ratio: 8.252117e-02	ci left: 1.075109e-03	ci right 1.168129e-03	k: 2253	n:2010000
Cons ci ratio: 5.513415e-04	ci left: 9.614932e-01	ci right 9.620239e-01	k: 1933136	n:2010000
KS ci ratio: 1.086860e-01	ci left: 6.116082e-04	ci right 6.823806e-04	k: 1299	n:2010000
CORO1B   2010000 perm   1940 sec   (1036 perm/sec)   p_kst 6.462687e-04   p_cons 9.617592e-01   p_joint 1.120896e-03

Joint ci ratio: 8.230236e-02	ci left: 1.075605e-03	ci right 1.168409e-03	k: 2265	n:2020000
Cons ci ratio: 5.499440e-04	ci left: 9.614980e-01	ci right 9.620274e-01	k: 1942762	n:2020000
KS ci ratio: 1.084361e-01	ci left: 6.114701e-04	ci right 6.820534e-04	k: 1305	n:2020000
CORO1B   2020000 perm   1958 sec   (1032 perm/sec)   p_kst 6.460396e-04   p_cons 9.617634e-01   p_joint 1.121287e-03

Joint ci ratio: 1.082705e-01	ci left: 6.103750e-04	ci right 6.807174e-04	k: 1309	n:2030000
Cons ci ratio: 5.485387e-04	ci left: 9.615053e-01	ci right 9.620333e-01	k: 1952393	n:2030000
KS ci ratio: 1.082705e-01	ci left: 6.103750e-04	ci right 6.807174e-04	k: 1309	n:2030000
CORO1B   2030000 perm   1975 sec   (1028 perm/sec)   p_kst 6.448276e-04   p_cons 9.617700e-01   p_joint 6.448276e-04

Joint ci ratio: 1.080645e-01	ci left: 6.097676e-04	ci right 6.798978e-04	k: 1314	n:2040000
Cons ci ratio: 5.472060e-04	ci left: 9.615041e-01	ci right 9.620309e-01	k: 1962007	n:2040000
KS ci ratio: 1.080645e-01	ci left: 6.097676e-04	ci right 6.798978e-04	k: 1314	n:2040000
CORO1B   2040000 perm   1992 sec   (1024 perm/sec)   p_kst 6.441176e-04   p_cons 9.617681e-01   p_joint 6.441176e-04

Joint ci ratio: 1.079006e-01	ci left: 6.086916e-04	ci right 6.785852e-04	k: 1318	n:2050000
Cons ci ratio: 5.459627e-04	ci left: 9.614922e-01	ci right 9.620177e-01	k: 1971599	n:2050000
KS ci ratio: 1.079006e-01	ci left: 6.086916e-04	ci right 6.785852e-04	k: 1318	n:2050000
CORO1B   2050000 perm   2010 sec   (1020 perm/sec)   p_kst 6.429268e-04   p_cons 9.617556e-01   p_joint 6.429268e-04

Joint ci ratio: 1.075748e-01	ci left: 6.095157e-04	ci right 6.792792e-04	k: 1326	n:2060000
Cons ci ratio: 5.445948e-04	ci left: 9.614984e-01	ci right 9.620226e-01	k: 1981228	n:2060000
KS ci ratio: 1.075748e-01	ci left: 6.095157e-04	ci right 6.792792e-04	k: 1326	n:2060000
CORO1B   2060000 perm   2028 sec   (1016 perm/sec)   p_kst 6.436893e-04   p_cons 9.617612e-01   p_joint 6.436893e-04

Joint ci ratio: 1.072520e-01	ci left: 6.103321e-04	ci right 6.799661e-04	k: 1334	n:2070000
Cons ci ratio: 5.433620e-04	ci left: 9.614876e-01	ci right 9.620106e-01	k: 1990822	n:2070000
KS ci ratio: 1.072520e-01	ci left: 6.103321e-04	ci right 6.799661e-04	k: 1334	n:2070000
CORO1B   2070000 perm   2045 sec   (1012 perm/sec)   p_kst 6.444444e-04   p_cons 9.617498e-01   p_joint 6.444444e-04

Joint ci ratio: 1.071317e-01	ci left: 6.088014e-04	ci right 6.781780e-04	k: 1337	n:2080000
Cons ci ratio: 5.420525e-04	ci left: 9.614885e-01	ci right 9.620103e-01	k: 2000440	n:2080000
KS ci ratio: 1.071317e-01	ci left: 6.088014e-04	ci right 6.781780e-04	k: 1337	n:2080000
CORO1B   2080000 perm   2063 sec   (1008 perm/sec)   p_kst 6.427885e-04   p_cons 9.617500e-01   p_joint 6.427885e-04

Joint ci ratio: 1.068129e-01	ci left: 6.096138e-04	ci right 6.788633e-04	k: 1345	n:2090000
Cons ci ratio: 5.409493e-04	ci left: 9.614624e-01	ci right 9.619832e-01	k: 2010002	n:2090000
KS ci ratio: 1.068129e-01	ci left: 6.096138e-04	ci right 6.788633e-04	k: 1345	n:2090000
CORO1B   2090000 perm   2080 sec   (1005 perm/sec)   p_kst 6.435407e-04   p_cons 9.617234e-01   p_joint 6.435407e-04

Joint ci ratio: 1.066546e-01	ci left: 6.085648e-04	ci right 6.775862e-04	k: 1349	n:2100000
Cons ci ratio: 5.396885e-04	ci left: 9.614591e-01	ci right 9.619786e-01	k: 2019611	n:2100000
KS ci ratio: 1.066546e-01	ci left: 6.085648e-04	ci right 6.775862e-04	k: 1349	n:2100000
CORO1B   2100000 perm   2098 sec   (1001 perm/sec)   p_kst 6.423810e-04   p_cons 9.617195e-01   p_joint 6.423810e-04

Joint ci ratio: 1.063399e-01	ci left: 6.093711e-04	ci right 6.782673e-04	k: 1357	n:2110000
Cons ci ratio: 5.384399e-04	ci left: 9.614554e-01	ci right 9.619737e-01	k: 2029219	n:2110000
KS ci ratio: 1.063399e-01	ci left: 6.093711e-04	ci right 6.782673e-04	k: 1357	n:2110000
CORO1B   2110000 perm   2116 sec   (997 perm/sec)   p_kst 6.431280e-04   p_cons 9.617152e-01   p_joint 6.431280e-04

Joint ci ratio: 1.060669e-01	ci left: 6.097109e-04	ci right 6.784575e-04	k: 1364	n:2120000
Cons ci ratio: 5.371140e-04	ci left: 9.614635e-01	ci right 9.619805e-01	k: 2038852	n:2120000
KS ci ratio: 1.060669e-01	ci left: 6.097109e-04	ci right 6.784575e-04	k: 1364	n:2120000
CORO1B   2120000 perm   2134 sec   (993 perm/sec)   p_kst 6.433962e-04   p_cons 9.617226e-01   p_joint 6.433962e-04

Joint ci ratio: 1.056036e-01	ci left: 6.123331e-04	ci right 6.810551e-04	k: 1376	n:2130000
Cons ci ratio: 5.357978e-04	ci left: 9.614715e-01	ci right 9.619873e-01	k: 2048485	n:2130000
KS ci ratio: 1.056036e-01	ci left: 6.123331e-04	ci right 6.810551e-04	k: 1376	n:2130000
CORO1B   2130000 perm   2152 sec   (990 perm/sec)   p_kst 6.460094e-04   p_cons 9.617300e-01   p_joint 6.460094e-04

Joint ci ratio: 1.052981e-01	ci left: 6.131115e-04	ci right 6.817094e-04	k: 1384	n:2140000
Cons ci ratio: 5.347151e-04	ci left: 9.614486e-01	ci right 9.619633e-01	k: 2058052	n:2140000
KS ci ratio: 1.052981e-01	ci left: 6.131115e-04	ci right 6.817094e-04	k: 1384	n:2140000
CORO1B   2140000 perm   2171 sec   (986 perm/sec)   p_kst 6.467290e-04   p_cons 9.617065e-01   p_joint 6.467290e-04

Joint ci ratio: 1.050330e-01	ci left: 6.134300e-04	ci right 6.818801e-04	k: 1391	n:2150000
Cons ci ratio: 5.335377e-04	ci left: 9.614398e-01	ci right 9.619534e-01	k: 2067649	n:2150000
KS ci ratio: 1.050330e-01	ci left: 6.134300e-04	ci right 6.818801e-04	k: 1391	n:2150000
CORO1B   2150000 perm   2190 sec   (982 perm/sec)   p_kst 6.469767e-04   p_cons 9.616972e-01   p_joint 6.469767e-04

Joint ci ratio: 1.049577e-01	ci left: 6.114916e-04	ci right 6.796735e-04	k: 1393	n:2160000
Cons ci ratio: 5.322275e-04	ci left: 9.614506e-01	ci right 9.619629e-01	k: 2077288	n:2160000
KS ci ratio: 1.049577e-01	ci left: 6.114916e-04	ci right 6.796735e-04	k: 1393	n:2160000
CORO1B   2160000 perm   2208 sec   (978 perm/sec)   p_kst 6.449074e-04   p_cons 9.617074e-01   p_joint 6.449074e-04

Joint ci ratio: 1.046952e-01	ci left: 6.118149e-04	ci right 6.798517e-04	k: 1400	n:2170000
Cons ci ratio: 5.310033e-04	ci left: 9.614507e-01	ci right 9.619619e-01	k: 2086904	n:2170000
KS ci ratio: 1.046952e-01	ci left: 6.118149e-04	ci right 6.798517e-04	k: 1400	n:2170000
CORO1B   2170000 perm   2226 sec   (975 perm/sec)   p_kst 6.451613e-04   p_cons 9.617069e-01   p_joint 6.451613e-04

Joint ci ratio: 1.045089e-01	ci left: 6.112420e-04	ci right 6.790867e-04	k: 1405	n:2180000
Cons ci ratio: 5.297908e-04	ci left: 9.614504e-01	ci right 9.619603e-01	k: 2096519	n:2180000
KS ci ratio: 1.045089e-01	ci left: 6.112420e-04	ci right 6.790867e-04	k: 1405	n:2180000
CORO1B   2180000 perm   2244 sec   (972 perm/sec)   p_kst 6.444954e-04   p_cons 9.617060e-01   p_joint 6.444954e-04

Joint ci ratio: 1.041391e-01	ci left: 6.128980e-04	ci right 6.806711e-04	k: 1415	n:2190000
Cons ci ratio: 5.284162e-04	ci left: 9.614738e-01	ci right 9.619825e-01	k: 2106186	n:2190000
KS ci ratio: 1.041391e-01	ci left: 6.128980e-04	ci right 6.806711e-04	k: 1415	n:2190000
CORO1B   2190000 perm   2262 sec   (968 perm/sec)   p_kst 6.461187e-04   p_cons 9.617288e-01   p_joint 6.461187e-04

Joint ci ratio: 1.037005e-01	ci left: 6.154250e-04	ci right 6.831734e-04	k: 1427	n:2200000
Cons ci ratio: 5.272539e-04	ci left: 9.614688e-01	ci right 9.619763e-01	k: 2115791	n:2200000
KS ci ratio: 1.037005e-01	ci left: 6.154250e-04	ci right 6.831734e-04	k: 1427	n:2200000
CORO1B   2200000 perm   2280 sec   (965 perm/sec)   p_kst 6.486364e-04   p_cons 9.617232e-01   p_joint 6.486364e-04

Joint ci ratio: 1.033752e-01	ci left: 6.166072e-04	ci right 6.842599e-04	k: 1436	n:2210000
Cons ci ratio: 5.259601e-04	ci left: 9.614834e-01	ci right 9.619896e-01	k: 2125439	n:2210000
KS ci ratio: 1.033752e-01	ci left: 6.166072e-04	ci right 6.842599e-04	k: 1436	n:2210000
CORO1B   2210000 perm   2298 sec   (962 perm/sec)   p_kst 6.497738e-04   p_cons 9.617371e-01   p_joint 6.497738e-04

Joint ci ratio: 1.031959e-01	ci left: 6.160238e-04	ci right 6.834881e-04	k: 1441	n:2220000
Cons ci ratio: 5.248043e-04	ci left: 9.614797e-01	ci right 9.619849e-01	k: 2135047	n:2220000
KS ci ratio: 1.031959e-01	ci left: 6.160238e-04	ci right 6.834881e-04	k: 1441	n:2220000
CORO1B   2220000 perm   2317 sec   (958 perm/sec)   p_kst 6.490991e-04   p_cons 9.617329e-01   p_joint 6.490991e-04

Joint ci ratio: 1.030531e-01	ci left: 6.150088e-04	ci right 6.822631e-04	k: 1445	n:2230000
Cons ci ratio: 5.237549e-04	ci left: 9.614621e-01	ci right 9.619663e-01	k: 2144624	n:2230000
KS ci ratio: 1.030531e-01	ci left: 6.150088e-04	ci right 6.822631e-04	k: 1445	n:2230000
CORO1B   2230000 perm   2336 sec   (955 perm/sec)   p_kst 6.479821e-04   p_cons 9.617148e-01   p_joint 6.479821e-04

Joint ci ratio: 1.024874e-01	ci left: 6.192225e-04	ci right 6.865436e-04	k: 1461	n:2240000
Cons ci ratio: 5.226958e-04	ci left: 9.614470e-01	ci right 9.619501e-01	k: 2154206	n:2240000
KS ci ratio: 1.024874e-01	ci left: 6.192225e-04	ci right 6.865436e-04	k: 1461	n:2240000
CORO1B   2240000 perm   2355 sec   (951 perm/sec)   p_kst 6.522321e-04   p_cons 9.616991e-01   p_joint 6.522321e-04

Joint ci ratio: 1.022081e-01	ci left: 6.199350e-04	ci right 6.871388e-04	k: 1469	n:2250000
Cons ci ratio: 5.216022e-04	ci left: 9.614377e-01	ci right 9.619398e-01	k: 2163801	n:2250000
KS ci ratio: 1.022081e-01	ci left: 6.199350e-04	ci right 6.871388e-04	k: 1469	n:2250000
CORO1B   2250000 perm   2373 sec   (948 perm/sec)   p_kst 6.528889e-04   p_cons 9.616893e-01   p_joint 6.528889e-04

Joint ci ratio: 1.020694e-01	ci left: 6.189166e-04	ci right 6.859135e-04	k: 1473	n:2260000
Cons ci ratio: 5.204091e-04	ci left: 9.614436e-01	ci right 9.619446e-01	k: 2173430	n:2260000
KS ci ratio: 1.020694e-01	ci left: 6.189166e-04	ci right 6.859135e-04	k: 1473	n:2260000
CORO1B   2260000 perm   2392 sec   (945 perm/sec)   p_kst 6.517699e-04   p_cons 9.616947e-01   p_joint 6.517699e-04

Joint ci ratio: 1.018279e-01	ci left: 6.191952e-04	ci right 6.860541e-04	k: 1480	n:2270000
Cons ci ratio: 5.193079e-04	ci left: 9.614376e-01	ci right 9.619374e-01	k: 2183032	n:2270000
KS ci ratio: 1.018279e-01	ci left: 6.191952e-04	ci right 6.860541e-04	k: 1480	n:2270000
CORO1B   2270000 perm   2410 sec   (942 perm/sec)   p_kst 6.519824e-04   p_cons 9.616881e-01   p_joint 6.519824e-04

Joint ci ratio: 1.015198e-01	ci left: 6.203264e-04	ci right 6.870928e-04	k: 1489	n:2280000
Cons ci ratio: 5.181582e-04	ci left: 9.614395e-01	ci right 9.619383e-01	k: 2192652	n:2280000
KS ci ratio: 1.015198e-01	ci left: 6.203264e-04	ci right 6.870928e-04	k: 1489	n:2280000
CORO1B   2280000 perm   2429 sec   (939 perm/sec)   p_kst 6.530702e-04   p_cons 9.616895e-01   p_joint 6.530702e-04

Joint ci ratio: 1.014179e-01	ci left: 6.188943e-04	ci right 6.854357e-04	k: 1492	n:2290000
Cons ci ratio: 5.170038e-04	ci left: 9.614432e-01	ci right 9.619408e-01	k: 2202276	n:2290000
KS ci ratio: 1.014179e-01	ci left: 6.188943e-04	ci right 6.854357e-04	k: 1492	n:2290000
CORO1B   2290000 perm   2448 sec   (935 perm/sec)   p_kst 6.515284e-04   p_cons 9.616926e-01   p_joint 6.515284e-04

Joint ci ratio: 1.013840e-01	ci left: 6.166272e-04	ci right 6.829014e-04	k: 1493	n:2300000
Cons ci ratio: 5.159332e-04	ci left: 9.614359e-01	ci right 9.619325e-01	k: 2211875	n:2300000
KS ci ratio: 1.013840e-01	ci left: 6.166272e-04	ci right 6.829014e-04	k: 1493	n:2300000
CORO1B   2300000 perm   2467 sec   (932 perm/sec)   p_kst 6.491304e-04   p_cons 9.616848e-01   p_joint 6.491304e-04

Joint ci ratio: 1.012486e-01	ci left: 6.156455e-04	ci right 6.817206e-04	k: 1497	n:2310000
Cons ci ratio: 5.148027e-04	ci left: 9.614383e-01	ci right 9.619338e-01	k: 2221496	n:2310000
KS ci ratio: 1.012486e-01	ci left: 6.156455e-04	ci right 6.817206e-04	k: 1497	n:2310000
CORO1B   2310000 perm   2487 sec   (929 perm/sec)   p_kst 6.480519e-04   p_cons 9.616866e-01   p_joint 6.480519e-04

Joint ci ratio: 1.009793e-01	ci left: 6.163530e-04	ci right 6.823176e-04	k: 1505	n:2320000
Cons ci ratio: 5.138298e-04	ci left: 9.614190e-01	ci right 9.619135e-01	k: 2231067	n:2320000
KS ci ratio: 1.009793e-01	ci left: 6.163530e-04	ci right 6.823176e-04	k: 1505	n:2320000
CORO1B   2320000 perm   2507 sec   (926 perm/sec)   p_kst 6.487069e-04   p_cons 9.616668e-01   p_joint 6.487069e-04

Joint ci ratio: 1.007122e-01	ci left: 6.170546e-04	ci right 6.829092e-04	k: 1513	n:2330000
Cons ci ratio: 5.128086e-04	ci left: 9.614076e-01	ci right 9.619011e-01	k: 2240656	n:2330000
KS ci ratio: 1.007122e-01	ci left: 6.170546e-04	ci right 6.829092e-04	k: 1513	n:2330000
CORO1B   2330000 perm   2527 sec   (922 perm/sec)   p_kst 6.493562e-04   p_cons 9.616549e-01   p_joint 6.493562e-04

Joint ci ratio: 1.005794e-01	ci left: 6.160839e-04	ci right 6.817432e-04	k: 1517	n:2340000
Cons ci ratio: 5.115976e-04	ci left: 9.614246e-01	ci right 9.619170e-01	k: 2250311	n:2340000
KS ci ratio: 1.005794e-01	ci left: 6.160839e-04	ci right 6.817432e-04	k: 1517	n:2340000
CORO1B   2340000 perm   2547 sec   (919 perm/sec)   p_kst 6.482906e-04   p_cons 9.616714e-01   p_joint 6.482906e-04

Joint ci ratio: 1.004142e-01	ci left: 6.155365e-04	ci right 6.810233e-04	k: 1522	n:2350000
Cons ci ratio: 5.104629e-04	ci left: 9.614316e-01	ci right 9.619230e-01	k: 2259943	n:2350000
KS ci ratio: 1.004142e-01	ci left: 6.155365e-04	ci right 6.810233e-04	k: 1522	n:2350000
CORO1B   2350000 perm   2566 sec   (916 perm/sec)   p_kst 6.476596e-04   p_cons 9.616779e-01   p_joint 6.476596e-04

Joint ci ratio: 1.002170e-01	ci left: 6.154069e-04	ci right 6.807438e-04	k: 1528	n:2360000
Cons ci ratio: 5.095377e-04	ci left: 9.614093e-01	ci right 9.618997e-01	k: 2269506	n:2360000
KS ci ratio: 1.002170e-01	ci left: 6.154069e-04	ci right 6.807438e-04	k: 1528	n:2360000
CORO1B   2360000 perm   2587 sec   (912 perm/sec)   p_kst 6.474576e-04   p_cons 9.616551e-01   p_joint 6.474576e-04

Joint ci ratio: 9.985837e-02	ci left: 6.173355e-04	ci right 6.826288e-04	k: 1539	n:2370000
Cons ci ratio: 5.084661e-04	ci left: 9.614092e-01	ci right 9.618986e-01	k: 2279121	n:2370000
KS ci ratio: 9.985837e-02	ci left: 6.173355e-04	ci right 6.826288e-04	k: 1539	n:2370000
CORO1B   2370000 perm   2606 sec   (909 perm/sec)   p_kst 6.493671e-04   p_cons 9.616544e-01   p_joint 6.493671e-04

Outputting figure to mutsig2_images.part000000000042/CORO1B.2_1510_2370000_0.00064937_0.96165_0.00064937.png
                gene_name: CORO1B
               theta_stop: 0.100 
                    nperm: 2370000 
                     p_ks: 0.00065 
        ci_ks_bounds_left: 0.00062 
       ci_ks_bounds_right: 0.00068 
                   p_cons: 0.96 
      ci_cons_bounds_left: 0.96 
     ci_cons_bounds_right: 0.96 
                  p_joint: 0.00065 
     ci_joint_bounds_left: 0.00062 
    ci_joint_bounds_right: 0.00068 

Current progress: 50 percent done.
CPE
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.130118e-02	ci left: 6.009618e-01	ci right 6.201737e-01	k: 6106	n:10000
KS ci ratio: 3.155843e-02	ci left: 5.970460e-01	ci right 6.162918e-01	k: 6067	n:10000
CPE   10000 perm   2 sec   (6615 perm/sec)   p_kst 6.067000e-01   p_cons 6.106000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000042/CPE.2_1467_10000_0.6067_0.6106_1.png
                gene_name: CPE
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000042
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 42 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1699>
Subject: Job 8704160: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1699>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000043> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:34:41 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000043.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000043.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 43  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000043.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    168.91 sec.
    Max Memory :      6053 MB
    Max Swap   :      8863 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
43
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 43
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 43: processing genes 3801 - 3890
Calculating significance of each gene.
Using projection method.
3801	CPXM2	1
3802	CPZ	2.623972e-01
3803	CR1	1
3804	CR1L	1
3805	CR2	1
3806	CRABP1	1
3807	CRABP2	1
3808	CRADD	1
3809	CRAMP1L	1
3810	CRAT	1
3811	CRB1	1
3812	CRB2	1
3813	CRB3	1
3814	CRBN	1
3815	CRCP	1
3816	CRCT1	1
3817	CREB1	1
3818	CREB3	1
3819	CREB3L1	1
3820	CREB3L2	1
3821	CREB3L3	2.143210e-03
3822	CREB3L4	1
3823	CREB5	1
3824	CREBBP	4.958576e-01
3825	CREBL2	1
3826	CREBZF	1
3827	CREG1	1
3828	CREG2	1
In gene CRELD1 the following bins exceed PROBCAP:
    THCA-DJ-A2PR-TP	categ 6	N = 1468    n = 1	mu =   1.72e-07
3829	CRELD1	1.394166e-01
3830	CRELD2	1
3831	CREM	1
3832	CRH	1
3833	CRHBP	1
3834	CRHR1	1
3835	CRHR2	1
3836	CRIM1	1
3837	CRIP1	1
3838	CRIP2	1
3839	CRIP3	1
3840	CRIPAK	6.433755e-04
3841	CRIPT	1
3842	CRISP1	1
3843	CRISP2	3.706942e-02
3844	CRISP3	1
3845	CRISPLD1	1
3846	CRISPLD2	1
3847	CRK	1
3848	CRKL	1
3849	CRLF1	1
3850	CRLF2	1
3851	CRLF3	1
3852	CRLS1	1
3853	CRMP1	1
3854	CRNKL1	1
3855	CRNN	1.423990e-01
3856	CROCC	1
3857	CROT	1
3858	CRP	3.554235e-02
3859	CRTAC1	1
3860	CRTAM	1
3861	CRTAP	1
3862	CRTC1	2.764382e-01
3863	CRTC2	1
3864	CRTC3	1.672454e-01
3865	CRX	1
3866	CRY1	1.717171e-01
3867	CRY2	1
3868	CRYAA	1
3869	CRYAB	1
3870	CRYBA1	1
3871	CRYBA2	1
3872	CRYBA4	1
3873	CRYBB1	1
3874	CRYBB2	1
3875	CRYBB3	1
3876	CRYBG3	1
3877	CRYGA	1
3878	CRYGB	1
3879	CRYGC	1
3880	CRYGD	1
3881	CRYGN	1
3882	CRYGS	1
3883	CRYL1	1
3884	CRYM	1
3885	CRYZ	1
3886	CRYZL1	1
3887	CS	1
3888	CSAD	1
3889	CSAG1	1
3890	CSDA	1
Done

Running MutSig 2:
Scatter job 43: processing genes 3801 - 3890
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CREB3L3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.630636e-02	ci left: 5.283689e-01	ci right 5.480089e-01	k: 5382	n:10000
Cons ci ratio: 6.340926e-02	ci left: 2.676508e-01	ci right 2.852796e-01	k: 2764	n:10000
KS ci ratio: 2.723572e-02	ci left: 6.651158e-01	ci right 6.835825e-01	k: 6744	n:10000
CREB3L3   10000 perm   2 sec   (5935 perm/sec)   p_kst 6.744000e-01   p_cons 2.764000e-01   p_joint 5.382000e-01

Outputting figure to mutsig2_images.part000000000043/CREB3L3.3_1426_10000_0.6744_0.2764_0.5382.png
                gene_name: CREB3L3
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.67 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.68 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.54 
     ci_joint_bounds_left: 0.53 
    ci_joint_bounds_right: 0.55 

Current progress: 33 percent done.
CRIPAK
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.949951e-02	ci left: 6.288939e-01	ci right 6.478255e-01	k: 6384	n:10000
KS ci ratio: 9.187825e-03	ci left: 9.434661e-01	ci right 9.522706e-01	k: 9480	n:10000
CRIPAK   10000 perm   2 sec   (5975 perm/sec)   p_kst 9.480000e-01   p_cons 6.384000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000043/CRIPAK.3_1345_10000_0.948_0.6384_1.png
                gene_name: CRIPAK
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.94 
       ci_ks_bounds_right: 0.95 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
CRNN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.909237e-02	ci left: 4.914510e-01	ci right 5.111482e-01	k: 5013	n:10000
Cons ci ratio: 3.918818e-03	ci left: 9.880698e-01	ci right 9.920369e-01	k: 9902	n:10000
KS ci ratio: 1.246431e-01	ci left: 8.436377e-02	ci right 9.567638e-02	k: 899	n:10000
CRNN   10000 perm   2 sec   (4462 perm/sec)   p_kst 8.990000e-02   p_cons 9.902000e-01   p_joint 5.013000e-01

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 2.785473e-03	ci left: 9.885759e-01	ci right 9.913789e-01	k: 19801	n:20000
KS ci ratio: 8.718300e-02	ci left: 8.778382e-02	ci right 9.583530e-02	k: 1835	n:20000
CRNN   20000 perm   5 sec   (4311 perm/sec)   p_kst 9.175000e-02   p_cons 9.900500e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000043/CRNN.2_1496_20000_0.09175_0.99005_1.png
                gene_name: CRNN
               theta_stop: 0.087 
                    nperm: 20000 
                     p_ks: 0.092 
        ci_ks_bounds_left: 0.088 
       ci_ks_bounds_right: 0.096 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 0.99 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000043
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 43 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1725>
Subject: Job 8704162: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1725>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000044> was used as the working directory.
Started at Thu Nov 15 19:32:13 2012
Results reported at Thu Nov 15 19:35:08 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000044.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000044.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 44  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000044.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    173.27 sec.
    Max Memory :      6019 MB
    Max Swap   :      8585 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
44
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 44
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 44: processing genes 3891 - 3980
Calculating significance of each gene.
Using projection method.
3891	CSDC2	1
3892	CSDE1	1
3893	CSE1L	1
3894	CSF1	1
3895	CSF1R	1
3896	CSF2	1
3897	CSF2RA	2.034385e-01
3898	CSF2RB	1.273602e-01
3899	CSF3	1
3900	CSF3R	2.774240e-01
3901	CSGALNACT1	1
3902	CSGALNACT2	1
3903	CSH1	1
3904	CSH2	1
3905	CSHL1	1
3906	CSK	1
3907	CSMD1	3.325836e-01
3908	CSMD2	5.841840e-01
3909	CSMD3	3.306500e-01
3910	CSN1S1	1
3911	CSN2	1
3912	CSN3	1
3913	CSNK1A1	1
3914	CSNK1A1L	1
3915	CSNK1D	1
3916	CSNK1E	1
3917	CSNK1G1	1
3918	CSNK1G2	1
3919	CSNK1G3	1.800493e-01
3920	CSNK2A1	1.412356e-01
3921	CSNK2A2	1
3922	CSNK2B	1
3923	CSPG4	5.203082e-01
3924	CSPG5	1
3925	CSPP1	1
3926	CSRNP1	1
3927	CSRNP2	1.944612e-01
3928	CSRNP3	1
3929	CSRP1	1
3930	CSRP2	1
3931	CSRP2BP	1
3932	CSRP3	1
3933	CST1	1
3934	CST11	1
3935	CST2	1
3936	CST3	1
3937	CST4	1
3938	CST5	1
3939	CST6	2.879334e-02
3940	CST7	1
3941	CST8	1
3942	CST9	1
3943	CST9L	1
3944	CSTA	1
3945	CSTB	1
3946	CSTF1	1
3947	CSTF2	1
3948	CSTF2T	1
3949	CSTF3	1
3950	CSTL1	1
3951	CT45A5	3.784327e-02
3952	CT47B1	1.591334e-01
3953	CT62	1
3954	CTAG2	1
3955	CTAGE1	1
3956	CTAGE5	3.002173e-02
3957	CTAGE6P	1
3958	CTAGE9	1
3959	CTBP1	4.768025e-02
3960	CTBP2	1
3961	CTBS	1
3962	CTCF	3.126452e-01
3963	CTCFL	1
3964	CTDP1	8.775677e-03
3965	CTDSP1	1
3966	CTDSP2	1
3967	CTDSPL	1
3968	CTDSPL2	1
3969	CTGF	1
3970	CTH	1
3971	CTHRC1	1
3972	CTLA4	1
3973	CTNNA1	1
3974	CTNNA2	1
3975	CTNNA3	1
In gene CTNNAL1 the following bins exceed PROBCAP:
    THCA-EM-A1CV-TP	categ 6	N = 2045    n = 1	mu =   1.03e-07
3976	CTNNAL1	1.118937e-01
3977	CTNNB1	4.861114e-02
3978	CTNNBIP1	1
3979	CTNNBL1	1
3980	CTNND1	3.119517e-01
Done

Running MutSig 2:
Scatter job 44: processing genes 3891 - 3980
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CSMD2
Processing conservation and coverage...
93% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.125455e-02	ci left: 4.645717e-01	ci right 4.842432e-01	k: 4744	n:10000
Cons ci ratio: 7.623591e-02	ci left: 2.010665e-01	ci right 2.171033e-01	k: 2090	n:10000
KS ci ratio: 4.741593e-02	ci left: 3.962539e-01	ci right 4.156010e-01	k: 4059	n:10000
CSMD2   10000 perm   3 sec   (3447 perm/sec)   p_kst 4.059000e-01   p_cons 2.090000e-01   p_joint 4.744000e-01

Outputting figure to mutsig2_images.part000000000044/CSMD2.4_10740_10000_0.4059_0.209_0.4744.png
                gene_name: CSMD2
               theta_stop: 0.076 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.20 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.47 
     ci_joint_bounds_left: 0.46 
    ci_joint_bounds_right: 0.48 

Current progress: 14 percent done.
CSMD3
Processing conservation and coverage...
87% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.650599e-02	ci left: 3.156236e-01	ci right 3.340785e-01	k: 3248	n:10000
Cons ci ratio: 4.877944e-02	ci left: 3.827127e-01	ci right 4.019500e-01	k: 3923	n:10000
KS ci ratio: 5.731428e-02	ci left: 3.094718e-01	ci right 3.278340e-01	k: 3186	n:10000
CSMD3   10000 perm   3 sec   (3490 perm/sec)   p_kst 3.186000e-01   p_cons 3.923000e-01   p_joint 3.248000e-01

Outputting figure to mutsig2_images.part000000000044/CSMD3.4_11470_10000_0.3186_0.3923_0.3248.png
                gene_name: CSMD3
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.39 
      ci_cons_bounds_left: 0.38 
     ci_cons_bounds_right: 0.40 
                  p_joint: 0.32 
     ci_joint_bounds_left: 0.32 
    ci_joint_bounds_right: 0.33 

Current progress: 29 percent done.
CSMD1
Processing conservation and coverage...
92% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.874217e-02	ci left: 4.959503e-01	ci right 5.156463e-01	k: 5058	n:10000
KS ci ratio: 4.408155e-02	ci left: 4.317357e-01	ci right 4.512984e-01	k: 4415	n:10000
CSMD1   10000 perm   3 sec   (3822 perm/sec)   p_kst 4.415000e-01   p_cons 5.058000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000044/CSMD1.2_10788_10000_0.4415_0.5058_1.png
                gene_name: CSMD1
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.44 
        ci_ks_bounds_left: 0.43 
       ci_ks_bounds_right: 0.45 
                   p_cons: 0.51 
      ci_cons_bounds_left: 0.50 
     ci_cons_bounds_right: 0.52 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 43 percent done.
CT45A5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.750894e-01	ci left: 1.716007e-02	ci right 2.272454e-02	k: 198	n:10000
Cons ci ratio: 1.325683e-01	ci left: 7.504646e-02	ci right 8.579947e-02	k: 803	n:10000
KS ci ratio: 3.960612e-01	ci left: 7.782754e-03	ci right 1.171078e-02	k: 96	n:10000
CT45A5   10000 perm   1 sec   (7189 perm/sec)   p_kst 9.600000e-03   p_cons 8.030000e-02   p_joint 1.980000e-02

Joint ci ratio: 3.254805e-01	ci left: 6.029406e-03	ci right 8.417230e-03	k: 143	n:20000
Cons ci ratio: 9.286544e-02	ci left: 7.798885e-02	ci right 8.563325e-02	k: 1635	n:20000
KS ci ratio: 2.837806e-01	ci left: 8.109344e-03	ci right 1.083612e-02	k: 188	n:20000
CT45A5   20000 perm   3 sec   (6298 perm/sec)   p_kst 9.400000e-03   p_cons 8.175000e-02   p_joint 7.150000e-03

Joint ci ratio: 2.008844e-01	ci left: 1.127349e-02	ci right 1.382221e-02	k: 375	n:30000
Cons ci ratio: 7.601052e-02	ci left: 7.832967e-02	ci right 8.455167e-02	k: 2442	n:30000
KS ci ratio: 2.331652e-01	ci left: 8.244884e-03	ci right 1.045170e-02	k: 279	n:30000
CT45A5   30000 perm   5 sec   (5943 perm/sec)   p_kst 9.300000e-03   p_cons 8.140000e-02   p_joint 1.250000e-02

Joint ci ratio: 1.638920e-01	ci left: 1.294346e-02	ci right 1.527787e-02	k: 563	n:40000
Cons ci ratio: 6.575404e-02	ci left: 7.891057e-02	ci right 8.430035e-02	k: 3263	n:40000
KS ci ratio: 2.083115e-01	ci left: 7.860632e-03	ci right 9.711739e-03	k: 350	n:40000
CT45A5   40000 perm   7 sec   (5741 perm/sec)   p_kst 8.750000e-03   p_cons 8.157500e-02   p_joint 1.407500e-02

Joint ci ratio: 1.488548e-01	ci left: 1.266089e-02	ci right 1.471615e-02	k: 683	n:50000
Cons ci ratio: 5.893825e-02	ci left: 7.887940e-02	ci right 8.368934e-02	k: 4063	n:50000
KS ci ratio: 1.854161e-01	ci left: 8.038148e-03	ci right 9.699627e-03	k: 442	n:50000
CT45A5   50000 perm   9 sec   (5588 perm/sec)   p_kst 8.840000e-03   p_cons 8.126000e-02   p_joint 1.366000e-02

Joint ci ratio: 1.346271e-01	ci left: 1.299456e-02	ci right 1.488622e-02	k: 835	n:60000
Cons ci ratio: 5.334483e-02	ci left: 8.035987e-02	ci right 8.478061e-02	k: 4953	n:60000
KS ci ratio: 1.708244e-01	ci left: 7.956468e-03	ci right 9.458300e-03	k: 521	n:60000
CT45A5   60000 perm   11 sec   (5451 perm/sec)   p_kst 8.683333e-03   p_cons 8.255000e-02   p_joint 1.391667e-02

Joint ci ratio: 1.260460e-01	ci left: 1.276889e-02	ci right 1.450034e-02	k: 953	n:70000
Cons ci ratio: 4.960638e-02	ci left: 7.986474e-02	ci right 8.394143e-02	k: 5732	n:70000
KS ci ratio: 1.588118e-01	ci left: 7.942983e-03	ci right 9.326782e-03	k: 603	n:70000
CT45A5   70000 perm   13 sec   (5321 perm/sec)   p_kst 8.614286e-03   p_cons 8.188571e-02   p_joint 1.361429e-02

Joint ci ratio: 1.186962e-01	ci left: 1.265108e-02	ci right 1.425949e-02	k: 1075	n:80000
Cons ci ratio: 4.643344e-02	ci left: 7.989747e-02	ci right 8.370792e-02	k: 6543	n:80000
KS ci ratio: 1.494624e-01	ci left: 7.887511e-03	ci right 9.173512e-03	k: 681	n:80000
CT45A5   80000 perm   15 sec   (5207 perm/sec)   p_kst 8.512500e-03   p_cons 8.178750e-02   p_joint 1.343750e-02

Joint ci ratio: 1.130252e-01	ci left: 1.244293e-02	ci right 1.394425e-02	k: 1186	n:90000
Cons ci ratio: 4.373585e-02	ci left: 8.014945e-02	ci right 8.374421e-02	k: 7374	n:90000
KS ci ratio: 1.399293e-01	ci left: 8.039244e-03	ci right 9.259409e-03	k: 777	n:90000
CT45A5   90000 perm   18 sec   (5091 perm/sec)   p_kst 8.633333e-03   p_cons 8.193333e-02   p_joint 1.317778e-02

Joint ci ratio: 1.075516e-01	ci left: 1.240442e-02	ci right 1.382403e-02	k: 1310	n:100000
Cons ci ratio: 4.155351e-02	ci left: 8.001939e-02	ci right 8.342492e-02	k: 8171	n:100000
KS ci ratio: 1.324741e-01	ci left: 8.104685e-03	ci right 9.264083e-03	k: 867	n:100000
CT45A5   100000 perm   20 sec   (4974 perm/sec)   p_kst 8.670000e-03   p_cons 8.171000e-02   p_joint 1.310000e-02

Joint ci ratio: 9.527970e-02	ci left: 1.443198e-02	ci right 1.588466e-02	k: 1666	n:110000
Cons ci ratio: 3.963942e-02	ci left: 8.002478e-02	ci right 8.327005e-02	k: 8980	n:110000
KS ci ratio: 1.261626e-01	ci left: 8.150832e-03	ci right 9.257123e-03	k: 956	n:110000
CT45A5   110000 perm   23 sec   (4873 perm/sec)   p_kst 8.690909e-03   p_cons 8.163636e-02   p_joint 1.514545e-02

Joint ci ratio: 9.622265e-02	ci left: 1.298483e-02	ci right 1.430550e-02	k: 1636	n:120000
Cons ci ratio: 3.790019e-02	ci left: 8.029665e-02	ci right 8.340693e-02	k: 9821	n:120000
KS ci ratio: 1.214979e-01	ci left: 8.077220e-03	ci right 9.130068e-03	k: 1031	n:120000
CT45A5   120000 perm   25 sec   (4771 perm/sec)   p_kst 8.591667e-03   p_cons 8.184167e-02   p_joint 1.363333e-02

Joint ci ratio: 9.243235e-02	ci left: 1.301499e-02	ci right 1.428376e-02	k: 1773	n:130000
Cons ci ratio: 3.640123e-02	ci left: 8.040725e-02	ci right 8.339604e-02	k: 10646	n:130000
KS ci ratio: 1.158463e-01	ci left: 8.224727e-03	ci right 9.243522e-03	k: 1134	n:130000
CT45A5   130000 perm   28 sec   (4676 perm/sec)   p_kst 8.723077e-03   p_cons 8.189231e-02   p_joint 1.363846e-02

Joint ci ratio: 8.872841e-02	ci left: 1.313953e-02	ci right 1.436645e-02	k: 1924	n:140000
Cons ci ratio: 3.504549e-02	ci left: 8.059625e-02	ci right 8.347823e-02	k: 11484	n:140000
KS ci ratio: 1.116005e-01	ci left: 8.247946e-03	ci right 9.229706e-03	k: 1222	n:140000
CT45A5   140000 perm   31 sec   (4584 perm/sec)   p_kst 8.728571e-03   p_cons 8.202857e-02   p_joint 1.374286e-02

Joint ci ratio: 8.545762e-02	ci left: 1.324181e-02	ci right 1.443042e-02	k: 2074	n:150000
Cons ci ratio: 3.378895e-02	ci left: 8.094706e-02	ci right 8.373577e-02	k: 12350	n:150000
KS ci ratio: 1.072954e-01	ci left: 8.346525e-03	ci right 9.299273e-03	k: 1322	n:150000
CT45A5   150000 perm   33 sec   (4497 perm/sec)   p_kst 8.813333e-03   p_cons 8.233333e-02   p_joint 1.382667e-02

Joint ci ratio: 8.322832e-02	ci left: 1.310551e-02	ci right 1.424971e-02	k: 2187	n:160000
Cons ci ratio: 3.264640e-02	ci left: 8.131145e-02	ci right 8.401620e-02	k: 13225	n:160000
KS ci ratio: 1.034895e-01	ci left: 8.427327e-03	ci right 9.353101e-03	k: 1421	n:160000
CT45A5   160000 perm   36 sec   (4419 perm/sec)   p_kst 8.881250e-03   p_cons 8.265625e-02   p_joint 1.366875e-02

Joint ci ratio: 8.051104e-02	ci left: 1.319892e-02	ci right 1.431188e-02	k: 2337	n:170000
Cons ci ratio: 3.167980e-02	ci left: 8.131315e-02	ci right 8.393640e-02	k: 14045	n:170000
KS ci ratio: 9.996245e-02	ci left: 8.516357e-03	ci right 9.418155e-03	k: 1523	n:170000
CT45A5   170000 perm   39 sec   (4382 perm/sec)   p_kst 8.958824e-03   p_cons 8.261765e-02   p_joint 1.374706e-02

Outputting figure to mutsig2_images.part000000000044/CT45A5.2_586_170000_0.0089588_0.082618_0.013747.png
                gene_name: CT45A5
               theta_stop: 0.100 
                    nperm: 170000 
                     p_ks: 0.0090 
        ci_ks_bounds_left: 0.0085 
       ci_ks_bounds_right: 0.0094 
                   p_cons: 0.083 
      ci_cons_bounds_left: 0.081 
     ci_cons_bounds_right: 0.084 
                  p_joint: 0.014 
     ci_joint_bounds_left: 0.013 
    ci_joint_bounds_right: 0.014 

Current progress: 57 percent done.
CTAGE5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.060454e-03	ci left: 9.810225e-01	ci right 9.860902e-01	k: 9837	n:10000
Cons ci ratio: 6.095056e-02	ci left: 2.835954e-01	ci right 3.015256e-01	k: 2925	n:10000
KS ci ratio: 4.228605e-02	ci left: 4.522906e-01	ci right 4.719315e-01	k: 4621	n:10000
CTAGE5   10000 perm   2 sec   (6660 perm/sec)   p_kst 4.621000e-01   p_cons 2.925000e-01   p_joint 9.837000e-01

Outputting figure to mutsig2_images.part000000000044/CTAGE5.2_2542_10000_0.4621_0.2925_0.9837.png
                gene_name: CTAGE5
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.29 
      ci_cons_bounds_left: 0.28 
     ci_cons_bounds_right: 0.30 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 71 percent done.
CTDP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.323372e-02	ci left: 4.413126e-01	ci right 4.609159e-01	k: 4511	n:10000
Cons ci ratio: 4.193059e-02	ci left: 4.564835e-01	ci right 4.761362e-01	k: 4663	n:10000
KS ci ratio: 5.151560e-02	ci left: 3.571454e-01	ci right 3.761324e-01	k: 3666	n:10000
CTDP1   10000 perm   2 sec   (6574 perm/sec)   p_kst 3.666000e-01   p_cons 4.663000e-01   p_joint 4.511000e-01

Outputting figure to mutsig2_images.part000000000044/CTDP1.2_2938_10000_0.3666_0.4663_0.4511.png
                gene_name: CTDP1
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.47 
      ci_cons_bounds_left: 0.46 
     ci_cons_bounds_right: 0.48 
                  p_joint: 0.45 
     ci_joint_bounds_left: 0.44 
    ci_joint_bounds_right: 0.46 

Current progress: 86 percent done.
CTNNB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.726746e-02	ci left: 2.448978e-01	ci right 2.620461e-01	k: 2534	n:10000
Cons ci ratio: 2.024777e-02	ci left: 7.812748e-01	ci right 7.973563e-01	k: 7894	n:10000
KS ci ratio: 1.403068e-01	ci left: 6.729912e-02	ci right 7.755164e-02	k: 723	n:10000
CTNNB1   10000 perm   2 sec   (6641 perm/sec)   p_kst 7.230000e-02   p_cons 7.894000e-01   p_joint 2.534000e-01

Joint ci ratio: 5.505822e-02	ci left: 1.966028e-01	ci right 2.077840e-01	k: 4043	n:20000
Cons ci ratio: 1.431931e-02	ci left: 7.836318e-01	ci right 7.949839e-01	k: 15787	n:20000
KS ci ratio: 9.776585e-02	ci left: 7.075129e-02	ci right 7.807302e-02	k: 1487	n:20000
CTNNB1   20000 perm   3 sec   (6002 perm/sec)   p_kst 7.435000e-02   p_cons 7.893500e-01   p_joint 2.021500e-01

Outputting figure to mutsig2_images.part000000000044/CTNNB1.2_2402_20000_0.07435_0.78935_0.20215.png
                gene_name: CTNNB1
               theta_stop: 0.098 
                    nperm: 20000 
                     p_ks: 0.074 
        ci_ks_bounds_left: 0.071 
       ci_ks_bounds_right: 0.078 
                   p_cons: 0.79 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.79 
                  p_joint: 0.20 
     ci_joint_bounds_left: 0.20 
    ci_joint_bounds_right: 0.21 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000044
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 44 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1702>
Subject: Job 8704165: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1702>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000045> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:14 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000045.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000045.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 45  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000045.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    180.99 sec.
    Max Memory :      5834 MB
    Max Swap   :      8524 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
45
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 45
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 45: processing genes 3981 - 4071
Calculating significance of each gene.
Using projection method.
3981	CTNND2	1.211370e-01
3982	CTNS	1
3983	CTPS	1
3984	CTPS2	4.610911e-02
3985	CTR9	2.597273e-01
3986	CTRC	1
3987	CTRL	1
3988	CTSA	1
3989	CTSB	1
3990	CTSC	1
3991	CTSD	1
3992	CTSE	1
3993	CTSF	1.612615e-01
3994	CTSG	1
3995	CTSH	1
3996	CTSK	1
3997	CTSL1	1
3998	CTSL2	1
3999	CTSO	1
4000/18093 4000	CTSS	4.292267e-02
4001	CTSW	1
4002	CTSZ	1
4003	CTTN	1
4004	CTTNBP2	2.980752e-03
4005	CTTNBP2NL	1
4006	CTU2	1
4007	CTXN1	1
4008	CTXN3	1
4009	CUBN	1
4010	CUEDC1	3.257407e-02
4011	CUEDC2	1
4012	CUL1	1
4013	CUL2	1
4014	CUL3	1
4015	CUL4A	1
4016	CUL4B	1
4017	CUL5	1
4018	CUL7	1
In gene CUL9 the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 7666    n = 1	mu =   2.06e-07
4019	CUL9	6.285333e-01
4020	CUTA	1
4021	CUTC	1
4022	CUX1	3.139793e-01
4023	CUX2	1
4024	CUZD1	1
4025	CWC15	1
4026	CWC22	1
4027	CWC25	1.169321e-01
4028	CWC27	1
4029	CWF19L1	1
4030	CWF19L2	1
4031	CWH43	1
4032	CX3CL1	1
4033	CX3CR1	1
4034	CXADR	1
4035	CXCL1	1
4036	CXCL10	1
4037	CXCL11	1
4038	CXCL12	1
4039	CXCL13	2.281937e-02
4040	CXCL14	1
4041	CXCL16	1
4042	CXCL17	1
4043	CXCL2	1
4044	CXCL3	1
4045	CXCL5	1
4046	CXCL6	1
4047	CXCL9	1
4048	CXCR1	1.100046e-01
4049	CXCR2	1
4050	CXCR3	1
4051	CXCR4	1
4052	CXCR5	1
4053	CXCR6	1
4054	CXCR7	1
4055	CXXC1	1
4056	CXXC4	1
4057	CXXC5	1.513955e-01
4058	CXorf1	1
4059	CXorf21	1
In gene CXorf22 the following bins exceed PROBCAP:
    THCA-BJ-A28S-TP	categ 6	N = 1102    n = 1	mu =   2.86e-07
4060	CXorf22	1.757782e-01
4061	CXorf23	1
4062	CXorf26	1
4063	CXorf27	1
4064	CXorf36	1
4065	CXorf38	1
4066	CXorf40A	1
4067	CXorf40B	1
4068	CXorf41	1
4069	CXorf48	1
4070	CXorf56	1
4071	CXorf57	1
Done

Running MutSig 2:
Scatter job 45: processing genes 3981 - 4071
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CTTNBP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.008195e-02	ci left: 4.789571e-01	ci right 4.986494e-01	k: 4888	n:10000
Cons ci ratio: 5.128351e-02	ci left: 3.592335e-01	ci right 3.782430e-01	k: 3687	n:10000
KS ci ratio: 3.808897e-02	ci left: 5.044512e-01	ci right 5.241404e-01	k: 5143	n:10000
CTTNBP2   10000 perm   2 sec   (4669 perm/sec)   p_kst 5.143000e-01   p_cons 3.687000e-01   p_joint 4.888000e-01

Outputting figure to mutsig2_images.part000000000045/CTTNBP2.4_5084_10000_0.5143_0.3687_0.4888.png
                gene_name: CTTNBP2
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.51 
        ci_ks_bounds_left: 0.50 
       ci_ks_bounds_right: 0.52 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.49 
     ci_joint_bounds_left: 0.48 
    ci_joint_bounds_right: 0.50 

Current progress: 50 percent done.
CTNND2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.463123e-01	ci left: 2.165304e-02	ci right 2.782806e-02	k: 246	n:10000
Cons ci ratio: 3.176417e-01	ci left: 1.261754e-02	ci right 1.747097e-02	k: 149	n:10000
KS ci ratio: 4.748480e-02	ci left: 3.955567e-01	ci right 4.148985e-01	k: 4052	n:10000
CTNND2   10000 perm   2 sec   (5594 perm/sec)   p_kst 4.052000e-01   p_cons 1.490000e-02   p_joint 2.460000e-02

Joint ci ratio: 2.610287e-01	ci left: 9.694399e-03	ci right 1.265029e-02	k: 222	n:20000
Cons ci ratio: 2.338876e-01	ci left: 1.222918e-02	ci right 1.551439e-02	k: 276	n:20000
KS ci ratio: 3.331329e-02	ci left: 4.022247e-01	ci right 4.159017e-01	k: 8181	n:20000
CTNND2   20000 perm   4 sec   (4985 perm/sec)   p_kst 4.090500e-01   p_cons 1.380000e-02   p_joint 1.110000e-02

Joint ci ratio: 2.056447e-01	ci left: 1.073536e-02	ci right 1.322716e-02	k: 358	n:30000
Cons ci ratio: 1.903900e-01	ci left: 1.260575e-02	ci right 1.528959e-02	k: 417	n:30000
KS ci ratio: 2.719635e-02	ci left: 4.035620e-01	ci right 4.147223e-01	k: 12274	n:30000
CTNND2   30000 perm   6 sec   (4769 perm/sec)   p_kst 4.091333e-01   p_cons 1.390000e-02   p_joint 1.193333e-02

Joint ci ratio: 1.847870e-01	ci left: 1.009638e-02	ci right 1.217550e-02	k: 444	n:40000
Cons ci ratio: 1.643358e-01	ci left: 1.287150e-02	ci right 1.519984e-02	k: 560	n:40000
KS ci ratio: 2.365121e-02	ci left: 4.023047e-01	ci right 4.119587e-01	k: 16285	n:40000
CTNND2   40000 perm   9 sec   (4630 perm/sec)   p_kst 4.071250e-01   p_cons 1.400000e-02   p_joint 1.110000e-02

Joint ci ratio: 1.648673e-01	ci left: 1.025768e-02	ci right 1.211972e-02	k: 558	n:50000
Cons ci ratio: 1.480884e-01	ci left: 1.279575e-02	ci right 1.486126e-02	k: 690	n:50000
KS ci ratio: 2.110221e-02	ci left: 4.040071e-01	ci right 4.126435e-01	k: 20416	n:50000
CTNND2   50000 perm   11 sec   (4514 perm/sec)   p_kst 4.083200e-01   p_cons 1.380000e-02   p_joint 1.116000e-02

Joint ci ratio: 1.503669e-01	ci left: 1.035728e-02	ci right 1.205716e-02	k: 671	n:60000
Cons ci ratio: 1.355343e-01	ci left: 1.281735e-02	ci right 1.469679e-02	k: 824	n:60000
KS ci ratio: 1.924658e-02	ci left: 4.048126e-01	ci right 4.126962e-01	k: 24525	n:60000
CTNND2   60000 perm   14 sec   (4427 perm/sec)   p_kst 4.087500e-01   p_cons 1.373333e-02   p_joint 1.118333e-02

Joint ci ratio: 1.554711e-01	ci left: 8.299922e-03	ci right 9.712657e-03	k: 629	n:70000
Cons ci ratio: 1.248572e-01	ci left: 1.301806e-02	ci right 1.476543e-02	k: 971	n:70000
KS ci ratio: 1.782975e-02	ci left: 4.048125e-01	ci right 4.121094e-01	k: 28592	n:70000
CTNND2   70000 perm   16 sec   (4349 perm/sec)   p_kst 4.084571e-01   p_cons 1.387143e-02   p_joint 8.985714e-03

Joint ci ratio: 1.035818e-01	ci left: 1.667573e-02	ci right 1.850949e-02	k: 1406	n:80000
Cons ci ratio: 1.165201e-01	ci left: 1.313655e-02	ci right 1.477397e-02	k: 1115	n:80000
KS ci ratio: 1.664877e-02	ci left: 4.059023e-01	ci right 4.127293e-01	k: 32745	n:80000
CTNND2   80000 perm   19 sec   (4270 perm/sec)   p_kst 4.093125e-01   p_cons 1.393750e-02   p_joint 1.757500e-02

Joint ci ratio: 9.796943e-02	ci left: 1.662082e-02	ci right 1.834381e-02	k: 1572	n:90000
Cons ci ratio: 1.101011e-01	ci left: 1.312364e-02	ci right 1.466348e-02	k: 1249	n:90000
KS ci ratio: 1.567508e-02	ci left: 4.067619e-01	ci right 4.131994e-01	k: 36898	n:90000
CTNND2   90000 perm   21 sec   (4198 perm/sec)   p_kst 4.099778e-01   p_cons 1.387778e-02   p_joint 1.746667e-02

Joint ci ratio: 9.205551e-02	ci left: 1.698949e-02	ci right 1.863865e-02	k: 1780	n:100000
Cons ci ratio: 1.050235e-01	ci left: 1.301789e-02	ci right 1.447052e-02	k: 1373	n:100000
KS ci ratio: 1.484916e-02	ci left: 4.076285e-01	ci right 4.137367e-01	k: 41068	n:100000
CTNND2   100000 perm   24 sec   (4129 perm/sec)   p_kst 4.106800e-01   p_cons 1.373000e-02   p_joint 1.780000e-02

Joint ci ratio: 8.912665e-02	ci left: 1.651100e-02	ci right 1.806005e-02	k: 1900	n:110000
Cons ci ratio: 9.984834e-02	ci left: 1.312776e-02	ci right 1.451623e-02	k: 1519	n:110000
KS ci ratio: 1.415091e-02	ci left: 4.080176e-01	ci right 4.138416e-01	k: 45202	n:110000
CTNND2   110000 perm   27 sec   (4063 perm/sec)   p_kst 4.109273e-01   p_cons 1.380909e-02   p_joint 1.727273e-02

Outputting figure to mutsig2_images.part000000000045/CTNND2.2_3766_110000_0.41093_0.013809_0.017273.png
                gene_name: CTNND2
               theta_stop: 0.100 
                    nperm: 110000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.41 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.014 
      ci_cons_bounds_left: 0.013 
     ci_cons_bounds_right: 0.015 
                  p_joint: 0.017 
     ci_joint_bounds_left: 0.017 
    ci_joint_bounds_right: 0.018 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000045
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 45 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1552>
Subject: Job 8704166: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1552>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000046> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:45 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000046.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000046.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 46  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000046.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    215.92 sec.
    Max Memory :      5472 MB
    Max Swap   :      8348 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
46
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 46
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 46: processing genes 4072 - 4161
Calculating significance of each gene.
Using projection method.
4072	CXorf58	1
4073	CXorf59	1
4074	CXorf61	3.347597e-02
4075	CXorf65	1
4076	CXorf66	1
4077	CYB561	1
4078	CYB561D1	1
4079	CYB561D2	1
4080	CYB5A	1
4081	CYB5B	1
4082	CYB5D1	1
4083	CYB5D2	1
4084	CYB5R1	1
4085	CYB5R2	1.014562e-01
4086	CYB5R3	1
4087	CYB5R4	1.039058e-02
4088	CYB5RL	1
4089	CYBA	1
4090	CYBASC3	1
4091	CYBB	1
4092	CYBRD1	1
4093	CYC1	1.302457e-01
4094	CYCS	1
4095	CYFIP1	1
4096	CYFIP2	1
4097	CYGB	1
4098	CYHR1	1
4099	CYLC1	1
4100	CYLC2	7.608891e-02
4101	CYLD	1
4102	CYP11A1	1.806088e-02
4103	CYP11B1	1.104481e-01
4104	CYP11B2	1
4105	CYP17A1	1
4106	CYP19A1	1
4107	CYP1A1	1
4108	CYP1A2	8.760016e-02
4109	CYP1B1	1
4110	CYP20A1	1
4111	CYP21A2	1
4112	CYP24A1	1
4113	CYP26A1	1
4114	CYP26B1	1
4115	CYP26C1	1
4116	CYP27A1	1
4117	CYP27B1	1
4118	CYP27C1	1
4119	CYP2A13	1.626691e-02
4120	CYP2A6	1
4121	CYP2A7	1
4122	CYP2B6	1
4123	CYP2C18	1
4124	CYP2C19	1
4125	CYP2C8	1.377348e-01
4126	CYP2C9	9.000852e-02
4127	CYP2D6	1
4128	CYP2E1	2.197918e-01
4129	CYP2F1	1
4130	CYP2J2	1
4131	CYP2R1	1
4132	CYP2S1	1
4133	CYP2U1	7.502759e-02
4134	CYP2W1	1
4135	CYP39A1	1
4136	CYP3A4	1
4137	CYP3A43	1
4138	CYP3A5	1
4139	CYP3A7	1
4140	CYP46A1	1
4141	CYP4A11	1
4142	CYP4A22	1
4143	CYP4B1	1
4144	CYP4F11	2.137089e-01
4145	CYP4F12	1
4146	CYP4F2	1
4147	CYP4F22	1
4148	CYP4F3	1
4149	CYP4F8	1
4150	CYP4V2	1
4151	CYP4X1	1
4152	CYP4Z1	1
4153	CYP51A1	1.780654e-01
4154	CYP7A1	1
4155	CYP7B1	1
4156	CYP8B1	1
4157	CYR61	1
4158	CYSLTR1	1
4159	CYSLTR2	7.389526e-02
4160	CYTH1	1.341368e-01
4161	CYTH2	1
Done

Running MutSig 2:
Scatter job 46: processing genes 4072 - 4161
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
CYB5R4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.776107e-02	ci left: 8.221868e-01	ci right 8.370206e-01	k: 8297	n:10000
Cons ci ratio: 6.119212e-03	ci left: 9.731262e-01	ci right 9.791920e-01	k: 9763	n:10000
KS ci ratio: 4.134564e-02	ci left: 4.634731e-01	ci right 4.831424e-01	k: 4733	n:10000
CYB5R4   10000 perm   2 sec   (6318 perm/sec)   p_kst 4.733000e-01   p_cons 9.763000e-01   p_joint 8.297000e-01

Outputting figure to mutsig2_images.part000000000046/CYB5R4.2_1630_10000_0.4733_0.9763_0.8297.png
                gene_name: CYB5R4
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.83 
     ci_joint_bounds_left: 0.82 
    ci_joint_bounds_right: 0.84 

Current progress: 33 percent done.
CYP11A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.630385e-02	ci left: 2.503360e-01	ci right 2.676047e-01	k: 2589	n:10000
KS ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
CYP11A1   10000 perm   2 sec   (6252 perm/sec)   p_kst 1   p_cons 2.589000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000046/CYP11A1.2_1602_10000_1_0.2589_1.png
                gene_name: CYP11A1
               theta_stop: 0.066 
                    nperm: 10000 
                     p_ks: 1 
        ci_ks_bounds_left: 1.00 
       ci_ks_bounds_right: 1 
                   p_cons: 0.26 
      ci_cons_bounds_left: 0.25 
     ci_cons_bounds_right: 0.27 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
CYP2A13
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.312848e-02	ci left: 5.735640e-01	ci right 5.929874e-01	k: 5833	n:10000
KS ci ratio: 2.213698e-02	ci left: 7.496835e-01	ci right 7.665659e-01	k: 7582	n:10000
CYP2A13   10000 perm   2 sec   (6339 perm/sec)   p_kst 7.582000e-01   p_cons 5.833000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000046/CYP2A13.2_1521_10000_0.7582_0.5833_1.png
                gene_name: CYP2A13
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.76 
        ci_ks_bounds_left: 0.75 
       ci_ks_bounds_right: 0.77 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.59 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000046
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 46 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1554>
Subject: Job 8704168: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1554>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000047> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:36:12 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000047.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000047.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 47  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000047.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    297.80 sec.
    Max Memory :      6061 MB
    Max Swap   :      8449 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
47
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 47
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 47: processing genes 4162 - 4252
Calculating significance of each gene.
Using projection method.
4162	CYTH3	1
4163	CYTH4	1.318521e-01
4164	CYTIP	1
4165	CYTL1	1
4166	CYTSA	1
4167	CYTSB	1
4168	CYYR1	1
4169	D2HGDH	1
4170	D4S234E	1
4171	DAAM1	5.764933e-02
4172	DAAM2	1
4173	DAB1	1
4174	DAB2	1
4175	DAB2IP	3.366007e-01
4176	DACH1	1.385742e-01
4177	DACH2	1
4178	DACT1	1
4179	DAD1	1
4180	DAG1	1
4181	DAGLA	4.495511e-01
4182	DAGLB	1
4183	DAK	1
4184	DALRD3	1
4185	DAND5	1
4186	DAO	1
4187	DAOA	1
4188	DAP	1
4189	DAP3	1
4190	DAPK1	3.553051e-01
4191	DAPK2	1
4192	DAPK3	1
4193	DAPL1	1
4194	DAPP1	1
4195	DARC	1
4196	DARS	1
4197	DARS2	1
4198	DAXX	1
4199	DAZAP1	1
4200	DAZAP2	1
4201	DAZL	1
4202	DBC1	1
4203	DBF4	1
4204	DBF4B	1
4205	DBH	1
4206	DBI	1
4207	DBN1	4.159971e-02
4208	DBNDD1	1
4209	DBNDD2	1
4210	DBNL	1
4211	DBP	4.857907e-02
4212	DBR1	1.321140e-01
4213	DBT	6.149119e-02
4214	DBX1	1
4215	DBX2	1
4216	DCAF10	1.066249e-01
4217	DCAF11	1
4218	DCAF12	1.072624e-01
4219	DCAF12L1	1
4220	DCAF12L2	2.291954e-02
In gene DCAF13 the following bins exceed PROBCAP:
    THCA-ET-A2N4-TP	categ 5	N = 1758    n = 1	mu =   2.14e-07
4221	DCAF13	2.679461e-02
4222	DCAF15	1
4223	DCAF16	1
4224	DCAF17	1
4225	DCAF4	1
4226	DCAF4L1	1
4227	DCAF4L2	1
4228	DCAF5	1
4229	DCAF6	1
4230	DCAF7	1
4231	DCAF8	1
4232	DCAF8L1	1
4233	DCAF8L2	1
4234	DCAKD	1.031308e-01
4235	DCBLD1	1
4236	DCBLD2	1
4237	DCC	1.191687e-01
4238	DCD	1
4239	DCDC1	1
4240	DCDC2	4.258288e-02
4241	DCDC2B	1
4242	DCHS1	4.173018e-01
4243	DCHS2	1
4244	DCI	1
4245	DCK	1
4246	DCLK1	1
4247	DCLK2	1
4248	DCLK3	1
4249	DCLRE1A	9.639634e-02
4250	DCLRE1B	1
4251	DCLRE1C	7.218000e-02
4252	DCN	1
Done

Running MutSig 2:
Scatter job 47: processing genes 4162 - 4252
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DAAM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.095449e-03	ci left: 9.921711e-01	ci right 9.953309e-01	k: 9939	n:10000
KS ci ratio: 5.096562e-02	ci left: 3.621174e-01	ci right 3.811575e-01	k: 3716	n:10000
DAAM1   10000 perm   2 sec   (4913 perm/sec)   p_kst 3.716000e-01   p_cons 9.939000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000047/DAAM1.2_3337_10000_0.3716_0.9939_1.png
                gene_name: DAAM1
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 20 percent done.
DBN1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.871592e-02	ci left: 2.991568e-01	ci right 3.173550e-01	k: 3082	n:10000
Cons ci ratio: 5.993563e-02	ci left: 2.905320e-01	ci right 3.085849e-01	k: 2995	n:10000
KS ci ratio: 1.123029e-01	ci left: 1.024689e-01	ci right 1.147601e-01	k: 1085	n:10000
DBN1   10000 perm   2 sec   (5888 perm/sec)   p_kst 1.085000e-01   p_cons 2.995000e-01   p_joint 3.082000e-01

Joint ci ratio: 4.428360e-02	ci left: 2.752246e-01	ci right 2.877390e-01	k: 5629	n:20000
Cons ci ratio: 4.241136e-02	ci left: 2.929081e-01	ci right 3.056503e-01	k: 5985	n:20000
KS ci ratio: 8.009590e-02	ci left: 1.026501e-01	ci right 1.112645e-01	k: 2138	n:20000
DBN1   20000 perm   4 sec   (5181 perm/sec)   p_kst 1.069000e-01   p_cons 2.992500e-01   p_joint 2.814500e-01

Outputting figure to mutsig2_images.part000000000047/DBN1.2_2102_20000_0.1069_0.29925_0.28145.png
                gene_name: DBN1
               theta_stop: 0.080 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.10 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.30 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.31 
                  p_joint: 0.28 
     ci_joint_bounds_left: 0.28 
    ci_joint_bounds_right: 0.29 

Current progress: 40 percent done.
DCAF12L2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.924285e-02	ci left: 3.782339e-01	ci right 3.974315e-01	k: 3878	n:10000
Cons ci ratio: 1.079994e-01	ci left: 1.100791e-01	ci right 1.227454e-01	k: 1163	n:10000
KS ci ratio: 2.735981e-02	ci left: 6.631019e-01	ci right 6.815976e-01	k: 6724	n:10000
DCAF12L2   10000 perm   2 sec   (6429 perm/sec)   p_kst 6.724000e-01   p_cons 1.163000e-01   p_joint 3.878000e-01

Joint ci ratio: 3.809593e-02	ci left: 3.395047e-01	ci right 3.527401e-01	k: 6922	n:20000
Cons ci ratio: 8.045436e-02	ci left: 1.018153e-01	ci right 1.103996e-01	k: 2121	n:20000
KS ci ratio: 1.923513e-02	ci left: 6.684084e-01	ci right 6.814407e-01	k: 13499	n:20000
DCAF12L2   20000 perm   4 sec   (5469 perm/sec)   p_kst 6.749500e-01   p_cons 1.060500e-01   p_joint 3.461000e-01

Outputting figure to mutsig2_images.part000000000047/DCAF12L2.2_1396_20000_0.67495_0.10605_0.3461.png
                gene_name: DCAF12L2
               theta_stop: 0.080 
                    nperm: 20000 
                     p_ks: 0.67 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.68 
                   p_cons: 0.11 
      ci_cons_bounds_left: 0.10 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.35 
     ci_joint_bounds_left: 0.34 
    ci_joint_bounds_right: 0.35 

Current progress: 60 percent done.
DCAF13
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.795366e-03	ci left: 9.756767e-01	ci right 9.814398e-01	k: 9787	n:10000
KS ci ratio: 1.436189e-02	ci left: 8.752086e-01	ci right 8.879681e-01	k: 8817	n:10000
DCAF13   10000 perm   2 sec   (6217 perm/sec)   p_kst 8.817000e-01   p_cons 9.787000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000047/DCAF13.2_1838_10000_0.8817_0.9787_1.png
                gene_name: DCAF13
               theta_stop: 0.014 
                    nperm: 10000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.89 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 80 percent done.
DCC
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.877102e-02	ci left: 2.987602e-01	ci right 3.169519e-01	k: 3078	n:10000
Cons ci ratio: 6.320387e-02	ci left: 2.689378e-01	ci right 2.865919e-01	k: 2777	n:10000
KS ci ratio: 7.884176e-02	ci left: 1.903270e-01	ci right 2.060492e-01	k: 1981	n:10000
DCC   10000 perm   2 sec   (4829 perm/sec)   p_kst 1.981000e-01   p_cons 2.777000e-01   p_joint 3.078000e-01

Outputting figure to mutsig2_images.part000000000047/DCC.2_4460_10000_0.1981_0.2777_0.3078.png
                gene_name: DCC
               theta_stop: 0.079 
                    nperm: 10000 
                     p_ks: 0.20 
        ci_ks_bounds_left: 0.19 
       ci_ks_bounds_right: 0.21 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.32 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000047
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 47 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1651>
Subject: Job 8704172: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1651>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000048> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 22:30:06 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000048.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000048.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 48  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000048.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10760.00 sec.
    Max Memory :      5863 MB
    Max Swap   :      8548 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
48
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 48
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 48: processing genes 4253 - 4342
Calculating significance of each gene.
Using projection method.
4253	DCP1A	1
4254	DCP1B	1
4255	DCP2	1
4256	DCPS	9.804906e-02
4257	DCST1	1
4258	DCST2	2.552994e-01
4259	DCT	1.842614e-01
4260	DCTD	1
4261	DCTN1	1
4262	DCTN2	1
4263	DCTN3	1
4264	DCTN4	1
4265	DCTN5	1
4266	DCTN6	1
4267	DCTPP1	1
4268	DCUN1D1	1
4269	DCUN1D2	1
4270	DCUN1D3	1
4271	DCUN1D4	7.354979e-02
4272	DCUN1D5	1
4273	DCX	1.233022e-03
4274	DCXR	1
4275	DDA1	1
4276	DDAH1	1
4277	DDAH2	1
4278	DDB1	1
4279	DDB2	1
4280	DDC	1
4281	DDHD1	1
4282	DDHD2	1
4283	DDI1	1
4284	DDI2	1
4285	DDIT3	1
4286	DDIT4	1
4287	DDIT4L	1
4288	DDN	1
4289	DDO	1
4290	DDOST	1
4291	DDR1	1
4292	DDR2	1
4293	DDRGK1	1
4294	DDTL	1
4295	DDX1	1
4296	DDX10	1
4297	DDX11	2.474853e-01
4298	DDX17	1
4299	DDX18	1
4300	DDX19A	1
4301	DDX19B	1
4302	DDX20	1
4303	DDX21	1
4304	DDX23	1.780501e-01
In gene DDX24 the following bins exceed PROBCAP:
    THCA-ET-A25J-TP	categ 6	N = 2612    n = 1	mu =   1.02e-07
4305	DDX24	3.746644e-02
4306	DDX25	1
4307	DDX26B	1
4308	DDX27	1
4309	DDX28	1
4310	DDX31	1
4311	DDX39	1.147480e-01
4312	DDX3X	1
4313	DDX4	1.941372e-01
4314	DDX41	1
4315	DDX42	3.568640e-01
4316	DDX43	1
4317	DDX46	1
4318	DDX47	1
4319	DDX49	1
4320	DDX5	1
4321	DDX50	1
4322	DDX51	1.481659e-01
4323	DDX52	1
4324	DDX53	1
4325	DDX54	1
4326	DDX55	1
4327	DDX56	1
4328	DDX58	1
4329	DDX59	1
4330	DDX6	1
4331	DDX60	1
4332	DDX60L	3.508571e-01
4333	DEAF1	1
4334	DEC1	1
4335	DECR1	8.276357e-02
4336	DECR2	6.527759e-02
4337	DEDD	1
4338	DEDD2	1
4339	DEF6	1
4340	DEF8	2.374952e-01
4341	DEFA3	1
4342	DEFA4	1
Done

Running MutSig 2:
Scatter job 48: processing genes 4253 - 4342
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DCX
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.426490e-02	ci left: 3.334940e-01	ci right 3.521976e-01	k: 3428	n:10000
Cons ci ratio: 7.494614e-02	ci left: 2.066861e-01	ci right 2.228804e-01	k: 2147	n:10000
KS ci ratio: 9.457605e-02	ci left: 1.396231e-01	ci right 1.535834e-01	k: 1465	n:10000
DCX   10000 perm   2 sec   (5346 perm/sec)   p_kst 1.465000e-01   p_cons 2.147000e-01   p_joint 3.428000e-01

Outputting figure to mutsig2_images.part000000000048/DCX.3_1369_10000_0.1465_0.2147_0.3428.png
                gene_name: DCX
               theta_stop: 0.095 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.34 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.35 

Current progress: 50 percent done.
DDX24
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.347854e-01	ci left: 1.300388e-03	ci right 3.208291e-03	k: 21	n:10000
Cons ci ratio: 1.940461e-02	ci left: 7.952698e-01	ci right 8.109533e-01	k: 8032	n:10000
KS ci ratio: 1.385306e+00	ci left: 2.814811e-04	ci right 1.441732e-03	k: 7	n:10000
DDX24   10000 perm   2 sec   (6284 perm/sec)   p_kst 7.000000e-04   p_cons 8.032000e-01   p_joint 2.100000e-03

Joint ci ratio: 7.273797e-01	ci left: 9.304852e-04	ci right 2.022759e-03	k: 28	n:20000
Cons ci ratio: 1.375989e-02	ci left: 7.967117e-01	ci right 8.078003e-01	k: 16046	n:20000
KS ci ratio: 1.239272e+00	ci left: 2.057886e-04	ci right 8.540675e-04	k: 9	n:20000
DDX24   20000 perm   4 sec   (5575 perm/sec)   p_kst 4.500000e-04   p_cons 8.023000e-01   p_joint 1.400000e-03

Joint ci ratio: 7.836602e-01	ci left: 5.126402e-04	ci right 1.190104e-03	k: 24	n:30000
Cons ci ratio: 1.126904e-02	ci left: 7.967726e-01	ci right 8.058356e-01	k: 24040	n:30000
KS ci ratio: 1.047402e+00	ci left: 2.307513e-04	ci right 7.408992e-04	k: 13	n:30000
DDX24   30000 perm   6 sec   (5318 perm/sec)   p_kst 4.333333e-04   p_cons 8.013333e-01   p_joint 8.000000e-04

Joint ci ratio: 8.763085e-01	ci left: 2.860045e-04	ci right 7.416724e-04	k: 19	n:40000
Cons ci ratio: 9.829939e-03	ci left: 7.950638e-01	ci right 8.029428e-01	k: 31961	n:40000
KS ci ratio: 9.797917e-01	ci left: 2.098994e-04	ci right 6.184302e-04	k: 15	n:40000
DDX24   40000 perm   8 sec   (5152 perm/sec)   p_kst 3.750000e-04   p_cons 7.990250e-01   p_joint 4.750000e-04

Joint ci ratio: 1.181783e+00	ci left: 9.591181e-05	ci right 3.677763e-04	k: 10	n:50000
Cons ci ratio: 8.738602e-03	ci left: 7.974529e-01	ci right 8.044721e-01	k: 40049	n:50000
KS ci ratio: 9.505685e-01	ci left: 1.829184e-04	ci right 5.196081e-04	k: 16	n:50000
DDX24   50000 perm   10 sec   (5020 perm/sec)   p_kst 3.200000e-04   p_cons 8.009800e-01   p_joint 2.000000e-04

Joint ci ratio: 1.087086e+00	ci left: 1.033471e-04	ci right 3.493337e-04	k: 12	n:60000
Cons ci ratio: 7.970033e-03	ci left: 7.980508e-01	ci right 8.044534e-01	k: 48076	n:60000
KS ci ratio: 8.552573e-01	ci left: 2.036202e-04	ci right 5.147596e-04	k: 20	n:60000
DDX24   60000 perm   12 sec   (4912 perm/sec)   p_kst 3.333333e-04   p_cons 8.012667e-01   p_joint 2.000000e-04

Joint ci ratio: 1.047552e+00	ci left: 9.888862e-05	ci right 3.175561e-04	k: 13	n:70000
Cons ci ratio: 7.374065e-03	ci left: 7.984968e-01	ci right 8.044210e-01	k: 56103	n:70000
KS ci ratio: 8.356095e-01	ci left: 1.857140e-04	ci right 4.585455e-04	k: 21	n:70000
DDX24   70000 perm   15 sec   (4792 perm/sec)   p_kst 3.000000e-04   p_cons 8.014714e-01   p_joint 1.857143e-04

Joint ci ratio: 7.039120e-01	ci left: 2.530248e-04	ci right 5.352929e-04	k: 30	n:80000
Cons ci ratio: 6.911810e-03	ci left: 7.980404e-01	ci right 8.035878e-01	k: 64066	n:80000
KS ci ratio: 7.277892e-01	ci left: 2.325847e-04	ci right 5.058080e-04	k: 28	n:80000
DDX24   80000 perm   17 sec   (4676 perm/sec)   p_kst 3.500000e-04   p_cons 8.008250e-01   p_joint 3.750000e-04

Joint ci ratio: 6.443080e-01	ci left: 2.801703e-04	ci right 5.537260e-04	k: 36	n:90000
Cons ci ratio: 6.523151e-03	ci left: 7.978739e-01	ci right 8.031067e-01	k: 72045	n:90000
KS ci ratio: 6.721437e-01	ci left: 2.524095e-04	ci right 5.148981e-04	k: 33	n:90000
DDX24   90000 perm   20 sec   (4569 perm/sec)   p_kst 3.666667e-04   p_cons 8.005000e-01   p_joint 4.000000e-04

Joint ci ratio: 6.120726e-01	ci left: 2.857808e-04	ci right 5.446471e-04	k: 40	n:100000
Cons ci ratio: 6.197313e-03	ci left: 7.975473e-01	ci right 8.025153e-01	k: 80004	n:100000
KS ci ratio: 6.357840e-01	ci left: 2.605271e-04	ci right 5.099606e-04	k: 37	n:100000
DDX24   100000 perm   23 sec   (4370 perm/sec)   p_kst 3.700000e-04   p_cons 8.000400e-01   p_joint 4.000000e-04

Joint ci ratio: 6.357952e-01	ci left: 2.368418e-04	ci right 4.636035e-04	k: 37	n:110000
Cons ci ratio: 5.907628e-03	ci left: 7.977333e-01	ci right 8.024690e-01	k: 88012	n:110000
KS ci ratio: 6.357952e-01	ci left: 2.368418e-04	ci right 4.636035e-04	k: 37	n:110000
DDX24   110000 perm   26 sec   (4301 perm/sec)   p_kst 3.363636e-04   p_cons 8.001091e-01   p_joint 3.363636e-04

Joint ci ratio: 6.047608e-01	ci left: 2.451967e-04	ci right 4.634812e-04	k: 41	n:120000
Cons ci ratio: 5.661586e-03	ci left: 7.975246e-01	ci right 8.020609e-01	k: 95976	n:120000
KS ci ratio: 6.047608e-01	ci left: 2.451967e-04	ci right 4.634812e-04	k: 41	n:120000
DDX24   120000 perm   29 sec   (4186 perm/sec)   p_kst 3.416667e-04   p_cons 7.998000e-01   p_joint 3.416667e-04

Joint ci ratio: 5.778680e-01	ci left: 2.524978e-04	ci right 4.631540e-04	k: 45	n:130000
Cons ci ratio: 5.433072e-03	ci left: 7.979927e-01	ci right 8.023477e-01	k: 104023	n:130000
KS ci ratio: 5.778680e-01	ci left: 2.524978e-04	ci right 4.631540e-04	k: 45	n:130000
DDX24   130000 perm   32 sec   (4120 perm/sec)   p_kst 3.461538e-04   p_cons 8.001769e-01   p_joint 3.461538e-04

Joint ci ratio: 5.599000e-01	ci left: 2.528063e-04	ci right 4.545534e-04	k: 48	n:140000
Cons ci ratio: 5.231318e-03	ci left: 7.983252e-01	ci right 8.025195e-01	k: 112060	n:140000
KS ci ratio: 5.599000e-01	ci left: 2.528063e-04	ci right 4.545534e-04	k: 48	n:140000
DDX24   140000 perm   35 sec   (4058 perm/sec)   p_kst 3.428571e-04   p_cons 8.004286e-01   p_joint 3.428571e-04

Joint ci ratio: 5.488146e-01	ci left: 2.474162e-04	ci right 4.394351e-04	k: 50	n:150000
Cons ci ratio: 5.053646e-03	ci left: 7.984150e-01	ci right 8.024667e-01	k: 120067	n:150000
KS ci ratio: 5.488146e-01	ci left: 2.474162e-04	ci right 4.394351e-04	k: 50	n:150000
DDX24   150000 perm   38 sec   (3996 perm/sec)   p_kst 3.333333e-04   p_cons 8.004467e-01   p_joint 3.333333e-04

Joint ci ratio: 5.146263e-01	ci left: 2.698311e-04	ci right 4.615389e-04	k: 57	n:160000
Cons ci ratio: 4.896279e-03	ci left: 7.982761e-01	ci right 8.022005e-01	k: 128039	n:160000
KS ci ratio: 5.146263e-01	ci left: 2.698311e-04	ci right 4.615389e-04	k: 57	n:160000
DDX24   160000 perm   41 sec   (3936 perm/sec)   p_kst 3.562500e-04   p_cons 8.002438e-01   p_joint 3.562500e-04

Joint ci ratio: 4.977482e-01	ci left: 2.744823e-04	ci right 4.609003e-04	k: 61	n:170000
Cons ci ratio: 4.752311e-03	ci left: 7.981850e-01	ci right 8.019930e-01	k: 136016	n:170000
KS ci ratio: 4.977482e-01	ci left: 2.744823e-04	ci right 4.609003e-04	k: 61	n:170000
DDX24   170000 perm   44 sec   (3879 perm/sec)   p_kst 3.588235e-04   p_cons 8.000941e-01   p_joint 3.588235e-04

Joint ci ratio: 4.899115e-01	ci left: 2.689598e-04	ci right 4.477801e-04	k: 63	n:180000
Cons ci ratio: 4.619533e-03	ci left: 7.981612e-01	ci right 8.018624e-01	k: 144003	n:180000
KS ci ratio: 4.899115e-01	ci left: 2.689598e-04	ci right 4.477801e-04	k: 63	n:180000
DDX24   180000 perm   47 sec   (3825 perm/sec)   p_kst 3.500000e-04   p_cons 8.000167e-01   p_joint 3.500000e-04

Joint ci ratio: 4.752835e-01	ci left: 2.732948e-04	ci right 4.478083e-04	k: 67	n:190000
Cons ci ratio: 4.498480e-03	ci left: 7.980569e-01	ci right 8.016603e-01	k: 151974	n:190000
KS ci ratio: 4.752835e-01	ci left: 2.732948e-04	ci right 4.478083e-04	k: 67	n:190000
DDX24   190000 perm   50 sec   (3772 perm/sec)   p_kst 3.526316e-04   p_cons 7.998632e-01   p_joint 3.526316e-04

Joint ci ratio: 4.466383e-01	ci left: 2.994081e-04	ci right 4.756039e-04	k: 76	n:200000
Cons ci ratio: 4.385235e-03	ci left: 7.980545e-01	ci right 8.015668e-01	k: 159963	n:200000
KS ci ratio: 4.466383e-01	ci left: 2.994081e-04	ci right 4.756039e-04	k: 76	n:200000
DDX24   200000 perm   54 sec   (3721 perm/sec)   p_kst 3.800000e-04   p_cons 7.998150e-01   p_joint 3.800000e-04

Joint ci ratio: 4.437691e-01	ci left: 2.893781e-04	ci right 4.582494e-04	k: 77	n:210000
Cons ci ratio: 4.278733e-03	ci left: 7.981585e-01	ci right 8.015856e-01	k: 167974	n:210000
KS ci ratio: 4.437691e-01	ci left: 2.893781e-04	ci right 4.582494e-04	k: 77	n:210000
DDX24   210000 perm   57 sec   (3669 perm/sec)   p_kst 3.666667e-04   p_cons 7.998762e-01   p_joint 3.666667e-04

Joint ci ratio: 4.226209e-01	ci left: 3.086248e-04	ci right 4.777228e-04	k: 85	n:220000
Cons ci ratio: 4.182421e-03	ci left: 7.980396e-01	ci right 8.013888e-01	k: 175938	n:220000
KS ci ratio: 4.226209e-01	ci left: 3.086248e-04	ci right 4.777228e-04	k: 85	n:220000
DDX24   220000 perm   61 sec   (3618 perm/sec)   p_kst 3.863636e-04   p_cons 7.997182e-01   p_joint 3.863636e-04

Joint ci ratio: 4.108455e-01	ci left: 3.146663e-04	ci right 4.809579e-04	k: 90	n:230000
Cons ci ratio: 4.089443e-03	ci left: 7.981587e-01	ci right 8.014337e-01	k: 183954	n:230000
KS ci ratio: 4.108455e-01	ci left: 3.146663e-04	ci right 4.809579e-04	k: 90	n:230000
DDX24   230000 perm   64 sec   (3567 perm/sec)   p_kst 3.913043e-04   p_cons 7.998000e-01   p_joint 3.913043e-04

Joint ci ratio: 4.064055e-01	ci left: 3.090316e-04	ci right 4.701039e-04	k: 92	n:240000
Cons ci ratio: 4.006777e-03	ci left: 7.979176e-01	ci right 8.011252e-01	k: 191886	n:240000
KS ci ratio: 4.064055e-01	ci left: 3.090316e-04	ci right 4.701039e-04	k: 92	n:240000
DDX24   240000 perm   68 sec   (3519 perm/sec)   p_kst 3.833333e-04   p_cons 7.995250e-01   p_joint 3.833333e-04

Joint ci ratio: 3.979377e-01	ci left: 3.110520e-04	ci right 4.689098e-04	k: 96	n:250000
Cons ci ratio: 3.924709e-03	ci left: 7.980414e-01	ci right 8.011836e-01	k: 199904	n:250000
KS ci ratio: 3.979377e-01	ci left: 3.110520e-04	ci right 4.689098e-04	k: 96	n:250000
DDX24   250000 perm   72 sec   (3472 perm/sec)   p_kst 3.840000e-04   p_cons 7.996160e-01   p_joint 3.840000e-04

Joint ci ratio: 4.251134e-01	ci left: 2.577067e-04	ci right 3.999758e-04	k: 84	n:260000
Cons ci ratio: 3.849194e-03	ci left: 7.980136e-01	ci right 8.010951e-01	k: 207885	n:260000
KS ci ratio: 3.899781e-01	ci left: 3.129490e-04	ci right 4.677759e-04	k: 100	n:260000
DDX24   260000 perm   76 sec   (3424 perm/sec)   p_kst 3.846154e-04   p_cons 7.995577e-01   p_joint 3.230769e-04

Joint ci ratio: 3.806686e-01	ci left: 3.180833e-04	ci right 4.707544e-04	k: 105	n:270000
Cons ci ratio: 3.777832e-03	ci left: 7.979922e-01	ci right 8.010162e-01	k: 215867	n:270000
KS ci ratio: 3.806686e-01	ci left: 3.180833e-04	ci right 4.707544e-04	k: 105	n:270000
DDX24   270000 perm   80 sec   (3378 perm/sec)   p_kst 3.888889e-04   p_cons 7.995074e-01   p_joint 3.888889e-04

Joint ci ratio: 3.703304e-01	ci left: 3.261299e-04	ci right 4.773829e-04	k: 111	n:280000
Cons ci ratio: 3.711042e-03	ci left: 7.979083e-01	ci right 8.008784e-01	k: 223831	n:280000
KS ci ratio: 3.703304e-01	ci left: 3.261299e-04	ci right 4.773829e-04	k: 111	n:280000
DDX24   280000 perm   84 sec   (3332 perm/sec)   p_kst 3.964286e-04   p_cons 7.993964e-01   p_joint 3.964286e-04

Joint ci ratio: 3.654688e-01	ci left: 3.242725e-04	ci right 4.722186e-04	k: 114	n:290000
Cons ci ratio: 3.644378e-03	ci left: 7.981211e-01	ci right 8.010384e-01	k: 231879	n:290000
KS ci ratio: 3.654688e-01	ci left: 3.242725e-04	ci right 4.722186e-04	k: 114	n:290000
DDX24   290000 perm   88 sec   (3288 perm/sec)   p_kst 3.931034e-04   p_cons 7.995828e-01   p_joint 3.931034e-04

Joint ci ratio: 3.607937e-01	ci left: 3.225510e-04	ci right 4.673867e-04	k: 117	n:300000
Cons ci ratio: 3.581366e-03	ci left: 7.983034e-01	ci right 8.011708e-01	k: 239922	n:300000
KS ci ratio: 3.607937e-01	ci left: 3.225510e-04	ci right 4.673867e-04	k: 117	n:300000
DDX24   300000 perm   92 sec   (3247 perm/sec)   p_kst 3.900000e-04   p_cons 7.997400e-01   p_joint 3.900000e-04

Joint ci ratio: 3.562935e-01	ci left: 3.209518e-04	ci right 4.628553e-04	k: 120	n:310000
Cons ci ratio: 3.523071e-03	ci left: 7.983320e-01	ci right 8.011527e-01	k: 247921	n:310000
KS ci ratio: 3.562935e-01	ci left: 3.209518e-04	ci right 4.628553e-04	k: 120	n:310000
DDX24   310000 perm   97 sec   (3206 perm/sec)   p_kst 3.870968e-04   p_cons 7.997452e-01   p_joint 3.870968e-04

Joint ci ratio: 3.533860e-01	ci left: 3.166148e-04	ci right 4.551962e-04	k: 122	n:320000
Cons ci ratio: 3.465842e-03	ci left: 7.985158e-01	ci right 8.012912e-01	k: 255970	n:320000
KS ci ratio: 3.533860e-01	ci left: 3.166148e-04	ci right 4.551962e-04	k: 122	n:320000
DDX24   320000 perm   101 sec   (3164 perm/sec)   p_kst 3.812500e-04   p_cons 7.999063e-01   p_joint 3.812500e-04

Joint ci ratio: 3.477763e-01	ci left: 3.180744e-04	ci right 4.545866e-04	k: 126	n:330000
Cons ci ratio: 3.412798e-03	ci left: 7.985491e-01	ci right 8.012820e-01	k: 263973	n:330000
KS ci ratio: 3.477763e-01	ci left: 3.180744e-04	ci right 4.545866e-04	k: 126	n:330000
DDX24   330000 perm   106 sec   (3126 perm/sec)   p_kst 3.818182e-04   p_cons 7.999182e-01   p_joint 3.818182e-04

Joint ci ratio: 3.450708e-01	ci left: 3.140897e-04	ci right 4.476088e-04	k: 128	n:340000
Cons ci ratio: 3.361808e-03	ci left: 7.986102e-01	ci right 8.013024e-01	k: 271986	n:340000
KS ci ratio: 3.450708e-01	ci left: 3.140897e-04	ci right 4.476088e-04	k: 128	n:340000
DDX24   340000 perm   110 sec   (3084 perm/sec)   p_kst 3.764706e-04   p_cons 7.999588e-01   p_joint 3.764706e-04

Joint ci ratio: 3.411274e-01	ci left: 3.129486e-04	ci right 4.441272e-04	k: 131	n:350000
Cons ci ratio: 3.315374e-03	ci left: 7.984418e-01	ci right 8.010961e-01	k: 279920	n:350000
KS ci ratio: 3.411274e-01	ci left: 3.129486e-04	ci right 4.441272e-04	k: 131	n:350000
DDX24   350000 perm   115 sec   (3046 perm/sec)   p_kst 3.742857e-04   p_cons 7.997714e-01   p_joint 3.742857e-04

Joint ci ratio: 3.348440e-01	ci left: 3.169660e-04	ci right 4.468534e-04	k: 136	n:360000
Cons ci ratio: 3.270951e-03	ci left: 7.982691e-01	ci right 8.008872e-01	k: 287849	n:360000
KS ci ratio: 3.348440e-01	ci left: 3.169660e-04	ci right 4.468534e-04	k: 136	n:360000
DDX24   360000 perm   120 sec   (3009 perm/sec)   p_kst 3.777778e-04   p_cons 7.995806e-01   p_joint 3.777778e-04

Joint ci ratio: 3.288955e-01	ci left: 3.207872e-04	ci right 4.494115e-04	k: 141	n:370000
Cons ci ratio: 3.226768e-03	ci left: 7.982550e-01	ci right 8.008376e-01	k: 295833	n:370000
KS ci ratio: 3.288955e-01	ci left: 3.207872e-04	ci right 4.494115e-04	k: 141	n:370000
DDX24   370000 perm   124 sec   (2974 perm/sec)   p_kst 3.810811e-04   p_cons 7.995486e-01   p_joint 3.810811e-04

Joint ci ratio: 3.277448e-01	ci left: 3.147600e-04	ci right 4.404329e-04	k: 142	n:380000
Cons ci ratio: 3.182994e-03	ci left: 7.983764e-01	ci right 8.009243e-01	k: 303868	n:380000
KS ci ratio: 3.277448e-01	ci left: 3.147600e-04	ci right 4.404329e-04	k: 142	n:380000
DDX24   380000 perm   129 sec   (2939 perm/sec)   p_kst 3.736842e-04   p_cons 7.996526e-01   p_joint 3.736842e-04

Joint ci ratio: 3.670875e-01	ci left: 2.387955e-04	ci right 3.483415e-04	k: 113	n:390000
Cons ci ratio: 3.141733e-03	ci left: 7.984121e-01	ci right 8.009270e-01	k: 311872	n:390000
KS ci ratio: 3.243604e-01	ci left: 3.137519e-04	ci right 4.374595e-04	k: 145	n:390000
DDX24   390000 perm   134 sec   (2904 perm/sec)   p_kst 3.717949e-04   p_cons 7.996718e-01   p_joint 2.897436e-04

Joint ci ratio: 3.608116e-01	ci left: 2.419113e-04	ci right 3.505434e-04	k: 117	n:400000
Cons ci ratio: 3.103344e-03	ci left: 7.983110e-01	ci right 8.007947e-01	k: 319822	n:400000
KS ci ratio: 3.200062e-01	ci left: 3.150995e-04	ci right 4.373289e-04	k: 149	n:400000
DDX24   400000 perm   139 sec   (2871 perm/sec)   p_kst 3.725000e-04   p_cons 7.995550e-01   p_joint 2.925000e-04

Joint ci ratio: 3.519727e-01	ci left: 2.493353e-04	ci right 3.579321e-04	k: 123	n:410000
Cons ci ratio: 3.064531e-03	ci left: 7.984031e-01	ci right 8.008560e-01	k: 327849	n:410000
KS ci ratio: 3.127898e-01	ci left: 3.231321e-04	ci right 4.450863e-04	k: 156	n:410000
DDX24   410000 perm   145 sec   (2832 perm/sec)   p_kst 3.804878e-04   p_cons 7.996317e-01   p_joint 3.000000e-04

Joint ci ratio: 3.437531e-01	ci left: 2.564367e-04	ci right 3.649385e-04	k: 129	n:420000
Cons ci ratio: 3.028758e-03	ci left: 7.983193e-01	ci right 8.007432e-01	k: 335804	n:420000
KS ci ratio: 3.069781e-01	ci left: 3.286137e-04	ci right 4.498818e-04	k: 162	n:420000
DDX24   420000 perm   150 sec   (2801 perm/sec)   p_kst 3.857143e-04   p_cons 7.995333e-01   p_joint 3.071429e-04

Joint ci ratio: 3.424394e-01	ci left: 2.525982e-04	ci right 3.589769e-04	k: 130	n:430000
Cons ci ratio: 2.994274e-03	ci left: 7.982325e-01	ci right 8.006285e-01	k: 343756	n:430000
KS ci ratio: 3.060418e-01	ci left: 3.231181e-04	ci right 4.419236e-04	k: 163	n:430000
DDX24   430000 perm   155 sec   (2770 perm/sec)   p_kst 3.790698e-04   p_cons 7.994326e-01   p_joint 3.023256e-04

Joint ci ratio: 3.424406e-01	ci left: 2.468572e-04	ci right 3.508186e-04	k: 130	n:440000
Cons ci ratio: 2.960395e-03	ci left: 7.982091e-01	ci right 8.005779e-01	k: 351734	n:440000
KS ci ratio: 3.060432e-01	ci left: 3.157743e-04	ci right 4.318802e-04	k: 163	n:440000
DDX24   440000 perm   161 sec   (2741 perm/sec)   p_kst 3.704545e-04   p_cons 7.993955e-01   p_joint 2.954545e-04

Joint ci ratio: 2.988397e-01	ci left: 3.251864e-04	ci right 4.414050e-04	k: 171	n:450000
Cons ci ratio: 2.927681e-03	ci left: 7.981824e-01	ci right 8.005248e-01	k: 359710	n:450000
KS ci ratio: 2.988397e-01	ci left: 3.251864e-04	ci right 4.414050e-04	k: 171	n:450000
DDX24   450000 perm   166 sec   (2710 perm/sec)   p_kst 3.800000e-04   p_cons 7.993556e-01   p_joint 3.800000e-04

Joint ci ratio: 2.962675e-01	ci left: 3.241521e-04	ci right 4.388164e-04	k: 174	n:460000
Cons ci ratio: 2.895832e-03	ci left: 7.981788e-01	ci right 8.004957e-01	k: 367696	n:460000
KS ci ratio: 2.962675e-01	ci left: 3.241521e-04	ci right 4.388164e-04	k: 174	n:460000
DDX24   460000 perm   172 sec   (2681 perm/sec)   p_kst 3.782609e-04   p_cons 7.993391e-01   p_joint 3.782609e-04

Joint ci ratio: 2.929384e-01	ci left: 3.251370e-04	ci right 4.386176e-04	k: 178	n:470000
Cons ci ratio: 2.864487e-03	ci left: 7.982331e-01	ci right 8.005250e-01	k: 375709	n:470000
KS ci ratio: 2.929384e-01	ci left: 3.251370e-04	ci right 4.386176e-04	k: 178	n:470000
DDX24   470000 perm   177 sec   (2654 perm/sec)   p_kst 3.787234e-04   p_cons 7.993809e-01   p_joint 3.787234e-04

Joint ci ratio: 2.921245e-01	ci left: 3.202937e-04	ci right 4.317157e-04	k: 179	n:480000
Cons ci ratio: 2.833935e-03	ci left: 7.983081e-01	ci right 8.005757e-01	k: 383733	n:480000
KS ci ratio: 2.921245e-01	ci left: 3.202937e-04	ci right 4.317157e-04	k: 179	n:480000
DDX24   480000 perm   183 sec   (2618 perm/sec)   p_kst 3.729167e-04   p_cons 7.994438e-01   p_joint 3.729167e-04

Joint ci ratio: 2.889317e-01	ci left: 3.213256e-04	ci right 4.316616e-04	k: 183	n:490000
Cons ci ratio: 2.804858e-03	ci left: 7.983210e-01	ci right 8.005653e-01	k: 391728	n:490000
KS ci ratio: 2.889317e-01	ci left: 3.213256e-04	ci right 4.316616e-04	k: 183	n:490000
DDX24   490000 perm   190 sec   (2574 perm/sec)   p_kst 3.734694e-04   p_cons 7.994449e-01   p_joint 3.734694e-04

Joint ci ratio: 2.850839e-01	ci left: 3.241794e-04	ci right 4.337462e-04	k: 188	n:500000
Cons ci ratio: 2.777871e-03	ci left: 7.981931e-01	ci right 8.004154e-01	k: 399653	n:500000
KS ci ratio: 2.850839e-01	ci left: 3.241794e-04	ci right 4.337462e-04	k: 188	n:500000
DDX24   500000 perm   197 sec   (2543 perm/sec)   p_kst 3.760000e-04   p_cons 7.993060e-01   p_joint 3.760000e-04

Joint ci ratio: 3.148138e-01	ci left: 2.561586e-04	ci right 3.535875e-04	k: 154	n:510000
Cons ci ratio: 2.750419e-03	ci left: 7.982138e-01	ci right 8.004142e-01	k: 407651	n:510000
KS ci ratio: 2.828481e-01	ci left: 3.232864e-04	ci right 4.315415e-04	k: 191	n:510000
DDX24   510000 perm   202 sec   (2519 perm/sec)   p_kst 3.745098e-04   p_cons 7.993157e-01   p_joint 3.019608e-04

Joint ci ratio: 2.813868e-01	ci left: 3.206433e-04	ci right 4.273603e-04	k: 193	n:520000
Cons ci ratio: 2.723341e-03	ci left: 7.982839e-01	ci right 8.004628e-01	k: 415675	n:520000
KS ci ratio: 2.813868e-01	ci left: 3.206433e-04	ci right 4.273603e-04	k: 193	n:520000
DDX24   520000 perm   208 sec   (2495 perm/sec)   p_kst 3.711538e-04   p_cons 7.993750e-01   p_joint 3.711538e-04

Joint ci ratio: 3.079369e-01	ci left: 2.586681e-04	ci right 3.544806e-04	k: 161	n:530000
Cons ci ratio: 2.697935e-03	ci left: 7.982456e-01	ci right 8.004040e-01	k: 423643	n:530000
KS ci ratio: 2.771333e-01	ci left: 3.251216e-04	ci right 4.314082e-04	k: 199	n:530000
DDX24   530000 perm   215 sec   (2471 perm/sec)   p_kst 3.754717e-04   p_cons 7.993264e-01   p_joint 3.037736e-04

Joint ci ratio: 3.069915e-01	ci left: 2.555868e-04	ci right 3.499106e-04	k: 162	n:540000
Cons ci ratio: 2.672255e-03	ci left: 7.983257e-01	ci right 8.004637e-01	k: 431674	n:540000
KS ci ratio: 2.750781e-01	ci left: 3.242718e-04	ci right 4.293584e-04	k: 202	n:540000
DDX24   540000 perm   221 sec   (2447 perm/sec)   p_kst 3.740741e-04   p_cons 7.993963e-01   p_joint 3.000000e-04

Joint ci ratio: 3.042048e-01	ci left: 2.559762e-04	ci right 3.494201e-04	k: 165	n:550000
Cons ci ratio: 2.647760e-03	ci left: 7.983465e-01	ci right 8.004649e-01	k: 439674	n:550000
KS ci ratio: 2.730679e-01	ci left: 3.234557e-04	ci right 4.273804e-04	k: 205	n:550000
DDX24   550000 perm   227 sec   (2425 perm/sec)   p_kst 3.727273e-04   p_cons 7.994073e-01   p_joint 3.000000e-04

Joint ci ratio: 2.698128e-01	ci left: 3.260007e-04	ci right 4.292832e-04	k: 210	n:560000
Cons ci ratio: 2.623531e-03	ci left: 7.984149e-01	ci right 8.005141e-01	k: 447701	n:560000
KS ci ratio: 2.698128e-01	ci left: 3.260007e-04	ci right 4.292832e-04	k: 210	n:560000
DDX24   560000 perm   233 sec   (2402 perm/sec)   p_kst 3.750000e-04   p_cons 7.994661e-01   p_joint 3.750000e-04

Joint ci ratio: 2.988518e-01	ci left: 2.567247e-04	ci right 3.484799e-04	k: 171	n:570000
Cons ci ratio: 2.599785e-03	ci left: 7.985022e-01	ci right 8.005825e-01	k: 455740	n:570000
KS ci ratio: 2.679151e-01	ci left: 3.251898e-04	ci right 4.273690e-04	k: 213	n:570000
DDX24   570000 perm   240 sec   (2379 perm/sec)   p_kst 3.736842e-04   p_cons 7.995439e-01   p_joint 3.000000e-04

Joint ci ratio: 2.954360e-01	ci left: 2.586810e-04	ci right 3.498807e-04	k: 175	n:580000
Cons ci ratio: 2.575715e-03	ci left: 7.987056e-01	ci right 8.007672e-01	k: 463848	n:580000
KS ci ratio: 2.648388e-01	ci left: 3.276282e-04	ci right 4.291955e-04	k: 218	n:580000
DDX24   580000 perm   246 sec   (2358 perm/sec)   p_kst 3.758621e-04   p_cons 7.997379e-01   p_joint 3.017241e-04

Joint ci ratio: 2.937718e-01	ci left: 2.574359e-04	ci right 3.475902e-04	k: 177	n:590000
Cons ci ratio: 2.554461e-03	ci left: 7.986306e-01	ci right 8.006749e-01	k: 471796	n:590000
KS ci ratio: 2.636381e-01	ci left: 3.252405e-04	ci right 4.255350e-04	k: 220	n:590000
DDX24   590000 perm   252 sec   (2337 perm/sec)   p_kst 3.728814e-04   p_cons 7.996542e-01   p_joint 3.000000e-04

Joint ci ratio: 2.937726e-01	ci left: 2.531452e-04	ci right 3.417971e-04	k: 177	n:600000
Cons ci ratio: 2.533434e-03	ci left: 7.985949e-01	ci right 8.006222e-01	k: 479766	n:600000
KS ci ratio: 2.636389e-01	ci left: 3.198197e-04	ci right 4.184429e-04	k: 220	n:600000
DDX24   600000 perm   259 sec   (2317 perm/sec)   p_kst 3.666667e-04   p_cons 7.996100e-01   p_joint 2.950000e-04

Joint ci ratio: 2.889424e-01	ci left: 2.581127e-04	ci right 3.467466e-04	k: 183	n:610000
Cons ci ratio: 2.512867e-03	ci left: 7.985669e-01	ci right 8.005778e-01	k: 487740	n:610000
KS ci ratio: 2.595596e-01	ci left: 3.252998e-04	ci right 4.238092e-04	k: 227	n:610000
DDX24   610000 perm   266 sec   (2297 perm/sec)   p_kst 3.721311e-04   p_cons 7.995738e-01   p_joint 3.000000e-04

Joint ci ratio: 2.866153e-01	ci left: 2.584391e-04	ci right 3.463409e-04	k: 186	n:620000
Cons ci ratio: 2.493043e-03	ci left: 7.985077e-01	ci right 8.005024e-01	k: 495694	n:620000
KS ci ratio: 2.562098e-01	ci left: 3.291051e-04	ci right 4.272750e-04	k: 233	n:620000
DDX24   620000 perm   272 sec   (2278 perm/sec)   p_kst 3.758065e-04   p_cons 7.995065e-01   p_joint 3.000000e-04

Joint ci ratio: 2.850950e-01	ci left: 2.572839e-04	ci right 3.442450e-04	k: 188	n:630000
Cons ci ratio: 2.473301e-03	ci left: 7.984996e-01	ci right 8.004786e-01	k: 503679	n:630000
KS ci ratio: 2.551223e-01	ci left: 3.268524e-04	ci right 4.238705e-04	k: 235	n:630000
DDX24   630000 perm   279 sec   (2258 perm/sec)   p_kst 3.730159e-04   p_cons 7.994905e-01   p_joint 2.984127e-04

Joint ci ratio: 2.843443e-01	ci left: 2.547147e-04	ci right 3.405401e-04	k: 189	n:640000
Cons ci ratio: 2.454475e-03	ci left: 7.984324e-01	ci right 8.003961e-01	k: 511626	n:640000
KS ci ratio: 2.540484e-01	ci left: 3.246709e-04	ci right 4.205716e-04	k: 237	n:640000
DDX24   640000 perm   286 sec   (2240 perm/sec)   p_kst 3.703125e-04   p_cons 7.994156e-01   p_joint 2.953125e-04

Joint ci ratio: 2.813974e-01	ci left: 2.565134e-04	ci right 3.418902e-04	k: 193	n:650000
Cons ci ratio: 2.435686e-03	ci left: 7.984182e-01	ci right 8.003668e-01	k: 519606	n:650000
KS ci ratio: 2.519400e-01	ci left: 3.254396e-04	ci right 4.206444e-04	k: 241	n:650000
DDX24   650000 perm   293 sec   (2221 perm/sec)   p_kst 3.707692e-04   p_cons 7.993938e-01   p_joint 2.969231e-04

Joint ci ratio: 2.806753e-01	ci left: 2.540352e-04	ci right 3.383317e-04	k: 194	n:660000
Cons ci ratio: 2.417563e-03	ci left: 7.983726e-01	ci right 8.003066e-01	k: 527565	n:660000
KS ci ratio: 2.514216e-01	ci left: 3.219282e-04	ci right 4.158817e-04	k: 242	n:660000
DDX24   660000 perm   300 sec   (2203 perm/sec)   p_kst 3.666667e-04   p_cons 7.993409e-01   p_joint 2.939394e-04

Joint ci ratio: 2.792472e-01	ci left: 2.530191e-04	ci right 3.364761e-04	k: 196	n:670000
Cons ci ratio: 2.399101e-03	ci left: 7.984271e-01	ci right 8.003464e-01	k: 535590	n:670000
KS ci ratio: 2.498840e-01	ci left: 3.213197e-04	ci right 4.144328e-04	k: 245	n:670000
DDX24   670000 perm   307 sec   (2186 perm/sec)   p_kst 3.656716e-04   p_cons 7.993881e-01   p_joint 2.925373e-04

Joint ci ratio: 2.785415e-01	ci left: 2.506659e-04	ci right 3.331012e-04	k: 197	n:680000
Cons ci ratio: 2.380946e-03	ci left: 7.984948e-01	ci right 8.003997e-01	k: 543625	n:680000
KS ci ratio: 2.483742e-01	ci left: 3.207307e-04	ci right 4.130249e-04	k: 248	n:680000
DDX24   680000 perm   314 sec   (2169 perm/sec)   p_kst 3.647059e-04   p_cons 7.994485e-01   p_joint 2.897059e-04

Joint ci ratio: 2.771455e-01	ci left: 2.497297e-04	ci right 3.313737e-04	k: 199	n:690000
Cons ci ratio: 2.363891e-03	ci left: 7.984662e-01	ci right 8.003574e-01	k: 551595	n:690000
KS ci ratio: 2.468915e-01	ci left: 3.201605e-04	ci right 4.116561e-04	k: 251	n:690000
DDX24   690000 perm   321 sec   (2152 perm/sec)   p_kst 3.637681e-04   p_cons 7.994130e-01   p_joint 2.884058e-04

Joint ci ratio: 2.750900e-01	ci left: 2.501512e-04	ci right 3.312214e-04	k: 202	n:700000
Cons ci ratio: 2.347072e-03	ci left: 7.984557e-01	ci right 8.003333e-01	k: 559577	n:700000
KS ci ratio: 2.444778e-01	ci left: 3.222899e-04	ci right 4.133570e-04	k: 256	n:700000
DDX24   700000 perm   328 sec   (2136 perm/sec)   p_kst 3.657143e-04   p_cons 7.993957e-01   p_joint 2.885714e-04

Joint ci ratio: 2.737450e-01	ci left: 2.492510e-04	ci right 3.295666e-04	k: 204	n:710000
Cons ci ratio: 2.330403e-03	ci left: 7.984737e-01	ci right 8.003380e-01	k: 567579	n:710000
KS ci ratio: 2.425971e-01	ci left: 3.230407e-04	ci right 4.135120e-04	k: 260	n:710000
DDX24   710000 perm   335 sec   (2121 perm/sec)   p_kst 3.661972e-04   p_cons 7.994070e-01   p_joint 2.873239e-04

Joint ci ratio: 2.730801e-01	ci left: 2.470828e-04	ci right 3.264732e-04	k: 205	n:720000
Cons ci ratio: 2.314244e-03	ci left: 7.984690e-01	ci right 8.003203e-01	k: 575565	n:720000
KS ci ratio: 2.416732e-01	ci left: 3.211632e-04	ci right 4.107148e-04	k: 262	n:720000
DDX24   720000 perm   342 sec   (2105 perm/sec)   p_kst 3.638889e-04   p_cons 7.993958e-01   p_joint 2.847222e-04

Joint ci ratio: 2.717642e-01	ci left: 2.462507e-04	ci right 3.249274e-04	k: 207	n:730000
Cons ci ratio: 2.298161e-03	ci left: 7.985001e-01	ci right 8.003386e-01	k: 583577	n:730000
KS ci ratio: 2.403067e-01	ci left: 3.206251e-04	ci right 4.094458e-04	k: 265	n:730000
DDX24   730000 perm   349 sec   (2089 perm/sec)   p_kst 3.630137e-04   p_cons 7.994205e-01   p_joint 2.835616e-04

Joint ci ratio: 2.711136e-01	ci left: 2.441824e-04	ci right 3.219796e-04	k: 208	n:740000
Cons ci ratio: 2.282928e-03	ci left: 7.984573e-01	ci right 8.002836e-01	k: 591535	n:740000
KS ci ratio: 2.394086e-01	ci left: 3.188326e-04	ci right 4.067777e-04	k: 267	n:740000
DDX24   740000 perm   357 sec   (2072 perm/sec)   p_kst 3.608108e-04   p_cons 7.993716e-01   p_joint 2.810811e-04

Joint ci ratio: 2.704676e-01	ci left: 2.421694e-04	ci right 3.191103e-04	k: 209	n:750000
Cons ci ratio: 2.268409e-03	ci left: 7.983570e-01	ci right 8.001714e-01	k: 599449	n:750000
KS ci ratio: 2.385205e-01	ci left: 3.170885e-04	ci right 4.041800e-04	k: 269	n:750000
DDX24   750000 perm   365 sec   (2055 perm/sec)   p_kst 3.586667e-04   p_cons 7.992653e-01   p_joint 2.786667e-04

Joint ci ratio: 2.679278e-01	ci left: 2.438909e-04	ci right 3.205289e-04	k: 213	n:760000
Cons ci ratio: 2.253811e-03	ci left: 7.983094e-01	ci right 8.001120e-01	k: 607401	n:760000
KS ci ratio: 2.367730e-01	ci left: 3.178661e-04	ci right 4.044378e-04	k: 273	n:760000
DDX24   760000 perm   373 sec   (2040 perm/sec)   p_kst 3.592105e-04   p_cons 7.992118e-01   p_joint 2.802632e-04

Joint ci ratio: 2.648512e-01	ci left: 2.467835e-04	ci right 3.232923e-04	k: 218	n:770000
Cons ci ratio: 2.239320e-03	ci left: 7.982878e-01	ci right 8.000787e-01	k: 615372	n:770000
KS ci ratio: 2.342221e-01	ci left: 3.210705e-04	ci right 4.074364e-04	k: 279	n:770000
DDX24   770000 perm   380 sec   (2024 perm/sec)   p_kst 3.623377e-04   p_cons 7.991844e-01   p_joint 2.831169e-04

Joint ci ratio: 2.630556e-01	ci left: 2.472113e-04	ci right 3.232475e-04	k: 221	n:780000
Cons ci ratio: 2.225122e-03	ci left: 7.982643e-01	ci right 8.000437e-01	k: 623341	n:780000
KS ci ratio: 2.325667e-01	ci left: 3.217826e-04	ci right 4.076404e-04	k: 283	n:780000
DDX24   780000 perm   388 sec   (2009 perm/sec)   p_kst 3.628205e-04   p_cons 7.991551e-01   p_joint 2.833333e-04

Joint ci ratio: 2.630560e-01	ci left: 2.440820e-04	ci right 3.191559e-04	k: 221	n:790000
Cons ci ratio: 2.211234e-03	ci left: 7.982350e-01	ci right 8.000033e-01	k: 631305	n:790000
KS ci ratio: 2.325672e-01	ci left: 3.177093e-04	ci right 4.024805e-04	k: 283	n:790000
DDX24   790000 perm   396 sec   (1994 perm/sec)   p_kst 3.582278e-04   p_cons 7.991203e-01   p_joint 2.797468e-04

Joint ci ratio: 2.618792e-01	ci left: 2.433665e-04	ci right 3.178306e-04	k: 223	n:800000
Cons ci ratio: 2.197535e-03	ci left: 7.982165e-01	ci right 7.999738e-01	k: 639277	n:800000
KS ci ratio: 2.313486e-01	ci left: 3.172700e-04	ci right 4.014170e-04	k: 286	n:800000
DDX24   800000 perm   405 sec   (1978 perm/sec)   p_kst 3.575000e-04   p_cons 7.990962e-01   p_joint 2.787500e-04

Joint ci ratio: 2.595716e-01	ci left: 2.449775e-04	ci right 3.191670e-04	k: 227	n:810000
Cons ci ratio: 2.183885e-03	ci left: 7.982282e-01	ci right 7.999746e-01	k: 647273	n:810000
KS ci ratio: 2.297530e-01	ci left: 3.180062e-04	ci right 4.016842e-04	k: 290	n:810000
DDX24   810000 perm   413 sec   (1962 perm/sec)   p_kst 3.580247e-04   p_cons 7.991025e-01   p_joint 2.802469e-04

Joint ci ratio: 2.584407e-01	ci left: 2.442707e-04	ci right 3.178717e-04	k: 229	n:820000
Cons ci ratio: 2.170924e-03	ci left: 7.981749e-01	ci right 7.999108e-01	k: 655216	n:820000
KS ci ratio: 2.281900e-01	ci left: 3.187263e-04	ci right 4.019430e-04	k: 294	n:820000
DDX24   820000 perm   421 sec   (1946 perm/sec)   p_kst 3.585366e-04   p_cons 7.990439e-01   p_joint 2.792683e-04

Joint ci ratio: 2.562221e-01	ci left: 2.458361e-04	ci right 3.191713e-04	k: 233	n:830000
Cons ci ratio: 2.157907e-03	ci left: 7.981652e-01	ci right 7.998906e-01	k: 663194	n:830000
KS ci ratio: 2.262803e-01	ci left: 3.205675e-04	ci right 4.034667e-04	k: 299	n:830000
DDX24   830000 perm   430 sec   (1931 perm/sec)   p_kst 3.602410e-04   p_cons 7.990289e-01   p_joint 2.807229e-04

Joint ci ratio: 2.551343e-01	ci left: 2.451379e-04	ci right 3.179049e-04	k: 235	n:840000
Cons ci ratio: 2.144573e-03	ci left: 7.982380e-01	ci right 7.999528e-01	k: 671241	n:840000
KS ci ratio: 2.255300e-01	ci left: 3.189974e-04	ci right 4.011790e-04	k: 301	n:840000
DDX24   840000 perm   438 sec   (1917 perm/sec)   p_kst 3.583333e-04   p_cons 7.990964e-01   p_joint 2.797619e-04

Joint ci ratio: 2.540601e-01	ci left: 2.444567e-04	ci right 3.166676e-04	k: 237	n:850000
Cons ci ratio: 2.131850e-03	ci left: 7.982537e-01	ci right 7.999584e-01	k: 679241	n:850000
KS ci ratio: 2.247871e-01	ci left: 3.174647e-04	ci right 3.989447e-04	k: 303	n:850000
DDX24   850000 perm   446 sec   (1904 perm/sec)   p_kst 3.564706e-04   p_cons 7.991071e-01   p_joint 2.788235e-04

Joint ci ratio: 2.535283e-01	ci left: 2.427030e-04	ci right 3.142221e-04	k: 238	n:860000
Cons ci ratio: 2.119704e-03	ci left: 7.982155e-01	ci right 7.999104e-01	k: 687195	n:860000
KS ci ratio: 2.240515e-01	ci left: 3.159681e-04	ci right 3.967620e-04	k: 305	n:860000
DDX24   860000 perm   455 sec   (1891 perm/sec)   p_kst 3.546512e-04   p_cons 7.990640e-01   p_joint 2.767442e-04

Joint ci ratio: 2.514329e-01	ci left: 2.442201e-04	ci right 3.154983e-04	k: 242	n:870000
Cons ci ratio: 2.107544e-03	ci left: 7.982116e-01	ci right 7.998968e-01	k: 695178	n:870000
KS ci ratio: 2.218864e-01	ci left: 3.188477e-04	ci right 3.994825e-04	k: 311	n:870000
DDX24   870000 perm   463 sec   (1878 perm/sec)   p_kst 3.574713e-04   p_cons 7.990552e-01   p_joint 2.781609e-04

Joint ci ratio: 2.504046e-01	ci left: 2.435747e-04	ci right 3.143285e-04	k: 244	n:880000
Cons ci ratio: 2.095569e-03	ci left: 7.982112e-01	ci right 7.998868e-01	k: 703164	n:880000
KS ci ratio: 2.211788e-01	ci left: 3.173711e-04	ci right 3.973416e-04	k: 313	n:880000
DDX24   880000 perm   472 sec   (1864 perm/sec)   p_kst 3.556818e-04   p_cons 7.990500e-01   p_joint 2.772727e-04

Joint ci ratio: 2.504050e-01	ci left: 2.408379e-04	ci right 3.107968e-04	k: 244	n:890000
Cons ci ratio: 2.083774e-03	ci left: 7.982143e-01	ci right 7.998804e-01	k: 711153	n:890000
KS ci ratio: 2.208278e-01	ci left: 3.148665e-04	ci right 3.940628e-04	k: 314	n:890000
DDX24   890000 perm   481 sec   (1851 perm/sec)   p_kst 3.528090e-04   p_cons 7.990483e-01   p_joint 2.741573e-04

Joint ci ratio: 2.488858e-01	ci left: 2.412867e-04	ci right 3.108849e-04	k: 247	n:900000
Cons ci ratio: 2.072104e-03	ci left: 7.982284e-01	ci right 7.998852e-01	k: 719152	n:900000
KS ci ratio: 2.197837e-01	ci left: 3.145173e-04	ci right 3.932013e-04	k: 317	n:900000
DDX24   900000 perm   490 sec   (1836 perm/sec)   p_kst 3.522222e-04   p_cons 7.990578e-01   p_joint 2.744444e-04

Joint ci ratio: 2.459282e-01	ci left: 2.448199e-04	ci right 3.144699e-04	k: 253	n:910000
Cons ci ratio: 2.060388e-03	ci left: 7.982797e-01	ci right 7.999272e-01	k: 727185	n:910000
KS ci ratio: 2.177389e-01	ci left: 3.172933e-04	ci right 3.958345e-04	k: 323	n:910000
DDX24   910000 perm   499 sec   (1824 perm/sec)   p_kst 3.549451e-04   p_cons 7.991044e-01   p_joint 2.780220e-04

Joint ci ratio: 2.459286e-01	ci left: 2.421588e-04	ci right 3.110518e-04	k: 253	n:920000
Cons ci ratio: 2.049021e-03	ci left: 7.983059e-01	ci right 7.999444e-01	k: 735196	n:920000
KS ci ratio: 2.167378e-01	ci left: 3.169279e-04	ci right 3.949700e-04	k: 326	n:920000
DDX24   920000 perm   508 sec   (1811 perm/sec)   p_kst 3.543478e-04   p_cons 7.991261e-01   p_joint 2.750000e-04

Joint ci ratio: 2.440146e-01	ci left: 2.435920e-04	ci right 3.122717e-04	k: 257	n:930000
Cons ci ratio: 2.038496e-03	ci left: 7.982282e-01	ci right 7.998581e-01	k: 743111	n:930000
KS ci ratio: 2.150994e-01	ci left: 3.186057e-04	ci right 3.963896e-04	k: 331	n:930000
DDX24   930000 perm   517 sec   (1798 perm/sec)   p_kst 3.559140e-04   p_cons 7.990441e-01   p_joint 2.763441e-04

Joint ci ratio: 2.430743e-01	ci left: 2.429984e-04	ci right 3.112069e-04	k: 259	n:940000
Cons ci ratio: 2.027875e-03	ci left: 7.981927e-01	ci right 7.998140e-01	k: 751064	n:940000
KS ci ratio: 2.138152e-01	ci left: 3.192431e-04	ci right 3.966562e-04	k: 335	n:940000
DDX24   940000 perm   526 sec   (1786 perm/sec)   p_kst 3.563830e-04   p_cons 7.990043e-01   p_joint 2.755319e-04

Joint ci ratio: 2.426084e-01	ci left: 2.414291e-04	ci right 3.090476e-04	k: 260	n:950000
Cons ci ratio: 2.016579e-03	ci left: 7.982918e-01	ci right 7.999043e-01	k: 759144	n:950000
KS ci ratio: 2.134980e-01	ci left: 3.168789e-04	ci right 3.935898e-04	k: 336	n:950000
DDX24   950000 perm   535 sec   (1774 perm/sec)   p_kst 3.536842e-04   p_cons 7.990989e-01   p_joint 2.736842e-04

Joint ci ratio: 2.407703e-01	ci left: 2.428286e-04	ci right 3.102469e-04	k: 264	n:960000
Cons ci ratio: 2.005853e-03	ci left: 7.983273e-01	ci right 7.999313e-01	k: 767165	n:960000
KS ci ratio: 2.116222e-01	ci left: 3.194955e-04	ci right 3.960720e-04	k: 342	n:960000
DDX24   960000 perm   545 sec   (1763 perm/sec)   p_kst 3.562500e-04   p_cons 7.991302e-01   p_joint 2.750000e-04

Joint ci ratio: 2.389734e-01	ci left: 2.442011e-04	ci right 3.114195e-04	k: 268	n:970000
Cons ci ratio: 1.995425e-03	ci left: 7.983415e-01	ci right 7.999371e-01	k: 775166	n:970000
KS ci ratio: 2.103989e-01	ci left: 3.201075e-04	ci right 3.963301e-04	k: 346	n:970000
DDX24   970000 perm   553 sec   (1753 perm/sec)   p_kst 3.567010e-04   p_cons 7.991402e-01   p_joint 2.762887e-04

Joint ci ratio: 2.389737e-01	ci left: 2.417092e-04	ci right 3.082418e-04	k: 268	n:980000
Cons ci ratio: 1.985019e-03	ci left: 7.983779e-01	ci right 7.999652e-01	k: 783189	n:980000
KS ci ratio: 2.100966e-01	ci left: 3.178077e-04	ci right 3.933600e-04	k: 347	n:980000
DDX24   980000 perm   563 sec   (1742 perm/sec)   p_kst 3.540816e-04   p_cons 7.991724e-01   p_joint 2.734694e-04

Joint ci ratio: 2.372164e-01	ci left: 2.430671e-04	ci right 3.094092e-04	k: 272	n:990000
Cons ci ratio: 1.974662e-03	ci left: 7.984318e-01	ci right 8.000109e-01	k: 791230	n:990000
KS ci ratio: 2.086032e-01	ci left: 3.193833e-04	ci right 3.947016e-04	k: 352	n:990000
DDX24   990000 perm   572 sec   (1731 perm/sec)   p_kst 3.555556e-04   p_cons 7.992222e-01   p_joint 2.747475e-04

Joint ci ratio: 2.354972e-01	ci left: 2.443996e-04	ci right 3.105515e-04	k: 276	n:1000000
Cons ci ratio: 1.964722e-03	ci left: 7.984425e-01	ci right 8.000137e-01	k: 799229	n:1000000
KS ci ratio: 2.074313e-01	ci left: 3.199811e-04	ci right 3.949626e-04	k: 356	n:1000000
DDX24   1000000 perm   581 sec   (1721 perm/sec)   p_kst 3.560000e-04   p_cons 7.992290e-01   p_joint 2.760000e-04

Joint ci ratio: 2.350735e-01	ci left: 2.429115e-04	ci right 3.085251e-04	k: 277	n:1010000
Cons ci ratio: 1.955202e-03	ci left: 7.984085e-01	ci right 7.999720e-01	k: 807183	n:1010000
KS ci ratio: 2.071416e-01	ci left: 3.177517e-04	ci right 3.920936e-04	k: 357	n:1010000
DDX24   1010000 perm   590 sec   (1711 perm/sec)   p_kst 3.534653e-04   p_cons 7.991911e-01   p_joint 2.742574e-04

Joint ci ratio: 2.329874e-01	ci left: 2.451447e-04	ci right 3.106892e-04	k: 282	n:1020000
Cons ci ratio: 1.945374e-03	ci left: 7.984487e-01	ci right 8.000045e-01	k: 815212	n:1020000
KS ci ratio: 2.054271e-01	ci left: 3.202150e-04	ci right 3.944352e-04	k: 363	n:1020000
DDX24   1020000 perm   600 sec   (1700 perm/sec)   p_kst 3.558824e-04   p_cons 7.992275e-01   p_joint 2.764706e-04

Joint ci ratio: 2.305558e-01	ci left: 2.482517e-04	ci right 3.138356e-04	k: 288	n:1030000
Cons ci ratio: 1.935716e-03	ci left: 7.984843e-01	ci right 8.000324e-01	k: 823237	n:1030000
KS ci ratio: 2.037544e-01	ci left: 3.226330e-04	ci right 3.967290e-04	k: 369	n:1030000
DDX24   1030000 perm   609 sec   (1690 perm/sec)   p_kst 3.582524e-04   p_cons 7.992592e-01   p_joint 2.796117e-04

Joint ci ratio: 2.293683e-01	ci left: 2.485831e-04	ci right 3.138684e-04	k: 291	n:1040000
Cons ci ratio: 1.926766e-03	ci left: 7.984249e-01	ci right 7.999657e-01	k: 831164	n:1040000
KS ci ratio: 2.029334e-01	ci left: 3.222685e-04	ci right 3.959456e-04	k: 372	n:1040000
DDX24   1040000 perm   619 sec   (1680 perm/sec)   p_kst 3.576923e-04   p_cons 7.991962e-01   p_joint 2.798077e-04

Joint ci ratio: 2.281991e-01	ci left: 2.489090e-04	ci right 3.138998e-04	k: 294	n:1050000
Cons ci ratio: 1.917733e-03	ci left: 7.984010e-01	ci right 7.999345e-01	k: 839127	n:1050000
KS ci ratio: 2.021223e-01	ci left: 3.219115e-04	ci right 3.951765e-04	k: 375	n:1050000
DDX24   1050000 perm   629 sec   (1670 perm/sec)   p_kst 3.571429e-04   p_cons 7.991686e-01   p_joint 2.800000e-04

Joint ci ratio: 2.266674e-01	ci left: 2.501195e-04	ci right 3.149267e-04	k: 298	n:1060000
Cons ci ratio: 1.908703e-03	ci left: 7.983983e-01	ci right 7.999246e-01	k: 847112	n:1060000
KS ci ratio: 1.997453e-01	ci left: 3.269381e-04	ci right 4.003655e-04	k: 384	n:1060000
DDX24   1060000 perm   638 sec   (1660 perm/sec)   p_kst 3.622642e-04   p_cons 7.991623e-01   p_joint 2.811321e-04

Joint ci ratio: 2.262895e-01	ci left: 2.486634e-04	ci right 3.129710e-04	k: 299	n:1070000
Cons ci ratio: 1.899678e-03	ci left: 7.984163e-01	ci right 7.999354e-01	k: 855119	n:1070000
KS ci ratio: 1.989717e-01	ci left: 3.265464e-04	ci right 3.995673e-04	k: 387	n:1070000
DDX24   1070000 perm   648 sec   (1651 perm/sec)   p_kst 3.616822e-04   p_cons 7.991766e-01   p_joint 2.794393e-04

Joint ci ratio: 2.255390e-01	ci left: 2.481081e-04	ci right 3.120296e-04	k: 301	n:1080000
Cons ci ratio: 1.890458e-03	ci left: 7.984886e-01	ci right 8.000005e-01	k: 863185	n:1080000
KS ci ratio: 1.984610e-01	ci left: 3.252825e-04	ci right 3.978115e-04	k: 389	n:1080000
DDX24   1080000 perm   658 sec   (1641 perm/sec)   p_kst 3.601852e-04   p_cons 7.992454e-01   p_joint 2.787037e-04

Joint ci ratio: 2.240599e-01	ci left: 2.492949e-04	ci right 3.130429e-04	k: 305	n:1090000
Cons ci ratio: 1.881731e-03	ci left: 7.984981e-01	ci right 8.000030e-01	k: 871184	n:1090000
KS ci ratio: 1.972008e-01	ci left: 3.266583e-04	ci right 3.989759e-04	k: 394	n:1090000
DDX24   1090000 perm   668 sec   (1632 perm/sec)   p_kst 3.614679e-04   p_cons 7.992514e-01   p_joint 2.798165e-04

Joint ci ratio: 2.233314e-01	ci left: 2.487449e-04	ci right 3.121170e-04	k: 307	n:1100000
Cons ci ratio: 1.873246e-03	ci left: 7.984866e-01	ci right 7.999846e-01	k: 879160	n:1100000
KS ci ratio: 1.967036e-01	ci left: 3.254171e-04	ci right 3.972566e-04	k: 396	n:1100000
DDX24   1100000 perm   678 sec   (1623 perm/sec)   p_kst 3.600000e-04   p_cons 7.992364e-01   p_joint 2.790909e-04

Joint ci ratio: 2.226098e-01	ci left: 2.482052e-04	ci right 3.112074e-04	k: 309	n:1110000
Cons ci ratio: 1.864723e-03	ci left: 7.985013e-01	ci right 7.999926e-01	k: 887165	n:1110000
KS ci ratio: 1.959646e-01	ci left: 3.250553e-04	ci right 3.965131e-04	k: 399	n:1110000
DDX24   1110000 perm   688 sec   (1613 perm/sec)   p_kst 3.594595e-04   p_cons 7.992477e-01   p_joint 2.783784e-04

Joint ci ratio: 2.211873e-01	ci left: 2.493620e-04	ci right 3.121984e-04	k: 313	n:1120000
Cons ci ratio: 1.856216e-03	ci left: 7.985329e-01	ci right 8.000174e-01	k: 895189	n:1120000
KS ci ratio: 1.949920e-01	ci left: 3.255497e-04	ci right 3.967188e-04	k: 403	n:1120000
DDX24   1120000 perm   698 sec   (1604 perm/sec)   p_kst 3.598214e-04   p_cons 7.992759e-01   p_joint 2.794643e-04

Joint ci ratio: 2.201382e-01	ci left: 2.496634e-04	ci right 3.122369e-04	k: 316	n:1130000
Cons ci ratio: 1.847978e-03	ci left: 7.985373e-01	ci right 8.000152e-01	k: 903183	n:1130000
KS ci ratio: 1.933241e-01	ci left: 3.285623e-04	ci right 3.997034e-04	k: 410	n:1130000
DDX24   1130000 perm   708 sec   (1595 perm/sec)   p_kst 3.628319e-04   p_cons 7.992770e-01   p_joint 2.796460e-04

Joint ci ratio: 2.191038e-01	ci left: 2.499602e-04	ci right 3.122741e-04	k: 319	n:1140000
Cons ci ratio: 1.839895e-03	ci left: 7.985337e-01	ci right 8.000051e-01	k: 911168	n:1140000
KS ci ratio: 1.926224e-01	ci left: 3.281846e-04	ci right 3.989558e-04	k: 413	n:1140000
DDX24   1140000 perm   719 sec   (1586 perm/sec)   p_kst 3.622807e-04   p_cons 7.992702e-01   p_joint 2.798246e-04

Joint ci ratio: 2.180839e-01	ci left: 2.502525e-04	ci right 3.123099e-04	k: 322	n:1150000
Cons ci ratio: 1.832174e-03	ci left: 7.984849e-01	ci right 7.999501e-01	k: 919101	n:1150000
KS ci ratio: 1.914696e-01	ci left: 3.294697e-04	ci right 4.000432e-04	k: 418	n:1150000
DDX24   1150000 perm   729 sec   (1577 perm/sec)   p_kst 3.634783e-04   p_cons 7.992183e-01   p_joint 2.800000e-04

Joint ci ratio: 2.160859e-01	ci left: 2.529864e-04	ci right 3.150708e-04	k: 328	n:1160000
Cons ci ratio: 1.824412e-03	ci left: 7.984612e-01	ci right 7.999201e-01	k: 927062	n:1160000
KS ci ratio: 1.901130e-01	ci left: 3.315548e-04	ci right 4.020137e-04	k: 424	n:1160000
DDX24   1160000 perm   740 sec   (1568 perm/sec)   p_kst 3.655172e-04   p_cons 7.991914e-01   p_joint 2.827586e-04

Joint ci ratio: 2.154321e-01	ci left: 2.524411e-04	ci right 3.141795e-04	k: 330	n:1170000
Cons ci ratio: 1.816274e-03	ci left: 7.985217e-01	ci right 7.999742e-01	k: 935121	n:1170000
KS ci ratio: 1.894456e-01	ci left: 3.311633e-04	ci right 4.012634e-04	k: 427	n:1170000
DDX24   1170000 perm   751 sec   (1559 perm/sec)   p_kst 3.649573e-04   p_cons 7.992487e-01   p_joint 2.820513e-04

Joint ci ratio: 2.131893e-01	ci left: 2.559157e-04	ci right 3.177670e-04	k: 337	n:1180000
Cons ci ratio: 1.808545e-03	ci left: 7.985278e-01	ci right 7.999741e-01	k: 943117	n:1180000
KS ci ratio: 1.879149e-01	ci left: 3.340089e-04	ci right 4.040749e-04	k: 434	n:1180000
DDX24   1180000 perm   762 sec   (1549 perm/sec)   p_kst 3.677966e-04   p_cons 7.992517e-01   p_joint 2.855932e-04

Joint ci ratio: 2.128748e-01	ci left: 2.545606e-04	ci right 3.159818e-04	k: 338	n:1190000
Cons ci ratio: 1.800900e-03	ci left: 7.985363e-01	ci right 7.999765e-01	k: 951116	n:1190000
KS ci ratio: 1.874845e-01	ci left: 3.328038e-04	ci right 4.024389e-04	k: 436	n:1190000
DDX24   1190000 perm   772 sec   (1540 perm/sec)   p_kst 3.663866e-04   p_cons 7.992571e-01   p_joint 2.840336e-04

Joint ci ratio: 2.122496e-01	ci left: 2.540172e-04	ci right 3.151039e-04	k: 340	n:1200000
Cons ci ratio: 1.793262e-03	ci left: 7.985606e-01	ci right 7.999947e-01	k: 959134	n:1200000
KS ci ratio: 1.870571e-01	ci left: 3.316189e-04	ci right 4.008300e-04	k: 438	n:1200000
DDX24   1200000 perm   783 sec   (1532 perm/sec)   p_kst 3.650000e-04   p_cons 7.992783e-01   p_joint 2.833333e-04

Joint ci ratio: 2.116300e-01	ci left: 2.534831e-04	ci right 3.142403e-04	k: 342	n:1210000
Cons ci ratio: 1.785858e-03	ci left: 7.985596e-01	ci right 7.999878e-01	k: 967122	n:1210000
KS ci ratio: 1.864213e-01	ci left: 3.312417e-04	ci right 4.001125e-04	k: 441	n:1210000
DDX24   1210000 perm   794 sec   (1523 perm/sec)   p_kst 3.644628e-04   p_cons 7.992744e-01   p_joint 2.826446e-04

Joint ci ratio: 2.107105e-01	ci left: 2.537343e-04	ci right 3.142534e-04	k: 345	n:1220000
Cons ci ratio: 1.778673e-03	ci left: 7.985356e-01	ci right 7.999580e-01	k: 975082	n:1220000
KS ci ratio: 1.857919e-01	ci left: 3.308710e-04	ci right 3.994063e-04	k: 444	n:1220000
DDX24   1220000 perm   805 sec   (1515 perm/sec)   p_kst 3.639344e-04   p_cons 7.992475e-01   p_joint 2.827869e-04

Joint ci ratio: 2.092042e-01	ci left: 2.555228e-04	ci right 3.159769e-04	k: 350	n:1230000
Cons ci ratio: 1.771668e-03	ci left: 7.984950e-01	ci right 7.999117e-01	k: 983021	n:1230000
KS ci ratio: 1.843473e-01	ci left: 3.336085e-04	ci right 4.021135e-04	k: 451	n:1230000
DDX24   1230000 perm   816 sec   (1507 perm/sec)   p_kst 3.666667e-04   p_cons 7.992041e-01   p_joint 2.845528e-04

Joint ci ratio: 2.083158e-01	ci left: 2.557550e-04	ci right 3.159744e-04	k: 353	n:1240000
Cons ci ratio: 1.764541e-03	ci left: 7.984922e-01	ci right 7.999032e-01	k: 991006	n:1240000
KS ci ratio: 1.833360e-01	ci left: 3.347648e-04	ci right 4.030882e-04	k: 456	n:1240000
DDX24   1240000 perm   827 sec   (1499 perm/sec)   p_kst 3.677419e-04   p_cons 7.991984e-01   p_joint 2.846774e-04

Joint ci ratio: 2.080224e-01	ci left: 2.544672e-04	ci right 3.142882e-04	k: 354	n:1250000
Cons ci ratio: 1.757683e-03	ci left: 7.984558e-01	ci right 7.998612e-01	k: 998949	n:1250000
KS ci ratio: 1.831359e-01	ci left: 3.328500e-04	ci right 4.007002e-04	k: 457	n:1250000
DDX24   1250000 perm   839 sec   (1491 perm/sec)   p_kst 3.656000e-04   p_cons 7.991592e-01   p_joint 2.832000e-04

Joint ci ratio: 2.074389e-01	ci left: 2.539524e-04	ci right 3.134636e-04	k: 356	n:1260000
Cons ci ratio: 1.750826e-03	ci left: 7.984343e-01	ci right 7.998342e-01	k: 1006910	n:1260000
KS ci ratio: 1.825391e-01	ci left: 3.324803e-04	ci right 4.000098e-04	k: 460	n:1260000
DDX24   1260000 perm   850 sec   (1483 perm/sec)   p_kst 3.650794e-04   p_cons 7.991349e-01   p_joint 2.825397e-04

Joint ci ratio: 2.065728e-01	ci left: 2.541925e-04	ci right 3.134799e-04	k: 359	n:1270000
Cons ci ratio: 1.743900e-03	ci left: 7.984407e-01	ci right 7.998351e-01	k: 1014906	n:1270000
KS ci ratio: 1.819481e-01	ci left: 3.321168e-04	ci right 3.993300e-04	k: 463	n:1270000
DDX24   1270000 perm   861 sec   (1474 perm/sec)   p_kst 3.645669e-04   p_cons 7.991386e-01   p_joint 2.826772e-04

Joint ci ratio: 2.060014e-01	ci left: 2.536884e-04	ci right 3.126740e-04	k: 361	n:1280000
Cons ci ratio: 1.737042e-03	ci left: 7.984494e-01	ci right 7.998383e-01	k: 1022905	n:1280000
KS ci ratio: 1.815574e-01	ci left: 3.310135e-04	ci right 3.978438e-04	k: 465	n:1280000
DDX24   1280000 perm   873 sec   (1466 perm/sec)   p_kst 3.632812e-04   p_cons 7.991445e-01   p_joint 2.820313e-04

Joint ci ratio: 2.045931e-01	ci left: 2.553986e-04	ci right 3.143250e-04	k: 366	n:1290000
Cons ci ratio: 1.730378e-03	ci left: 7.984370e-01	ci right 7.998206e-01	k: 1030877	n:1290000
KS ci ratio: 1.803995e-01	ci left: 3.328880e-04	ci right 3.996213e-04	k: 471	n:1290000
DDX24   1290000 perm   885 sec   (1458 perm/sec)   p_kst 3.651163e-04   p_cons 7.991295e-01   p_joint 2.837209e-04

Joint ci ratio: 2.040380e-01	ci left: 2.548937e-04	ci right 3.135242e-04	k: 368	n:1300000
Cons ci ratio: 1.723591e-03	ci left: 7.984618e-01	ci right 7.998399e-01	k: 1038897	n:1300000
KS ci ratio: 1.800187e-01	ci left: 3.317964e-04	ci right 3.981551e-04	k: 473	n:1300000
DDX24   1300000 perm   896 sec   (1451 perm/sec)   p_kst 3.638462e-04   p_cons 7.991515e-01   p_joint 2.830769e-04

Joint ci ratio: 2.037622e-01	ci left: 2.536723e-04	ci right 3.119332e-04	k: 369	n:1310000
Cons ci ratio: 1.716745e-03	ci left: 7.985122e-01	ci right 7.998850e-01	k: 1046951	n:1310000
KS ci ratio: 1.794517e-01	ci left: 3.314506e-04	ci right 3.975088e-04	k: 476	n:1310000
DDX24   1310000 perm   908 sec   (1443 perm/sec)   p_kst 3.633588e-04   p_cons 7.991992e-01   p_joint 2.816794e-04

Joint ci ratio: 2.023991e-01	ci left: 2.553459e-04	ci right 3.135503e-04	k: 374	n:1320000
Cons ci ratio: 1.710258e-03	ci left: 7.985095e-01	ci right 7.998771e-01	k: 1054936	n:1320000
KS ci ratio: 1.781491e-01	ci left: 3.340053e-04	ci right 4.000374e-04	k: 483	n:1320000
DDX24   1320000 perm   920 sec   (1435 perm/sec)   p_kst 3.659091e-04   p_cons 7.991939e-01   p_joint 2.833333e-04

Joint ci ratio: 2.018616e-01	ci left: 2.548536e-04	ci right 3.127725e-04	k: 376	n:1330000
Cons ci ratio: 1.703872e-03	ci left: 7.985016e-01	ci right 7.998640e-01	k: 1062914	n:1330000
KS ci ratio: 1.777823e-01	ci left: 3.329308e-04	ci right 3.986003e-04	k: 485	n:1330000
DDX24   1330000 perm   932 sec   (1427 perm/sec)   p_kst 3.646617e-04   p_cons 7.991835e-01   p_joint 2.827068e-04

Joint ci ratio: 2.005360e-01	ci left: 2.564951e-04	ci right 3.143575e-04	k: 381	n:1340000
Cons ci ratio: 1.697679e-03	ci left: 7.984706e-01	ci right 7.998281e-01	k: 1070861	n:1340000
KS ci ratio: 1.766947e-01	ci left: 3.347252e-04	ci right 4.003017e-04	k: 491	n:1340000
DDX24   1340000 perm   944 sec   (1420 perm/sec)   p_kst 3.664179e-04   p_cons 7.991500e-01   p_joint 2.843284e-04

Joint ci ratio: 2.034882e-01	ci left: 2.468590e-04	ci right 3.034693e-04	k: 370	n:1350000
Cons ci ratio: 1.691557e-03	ci left: 7.984394e-01	ci right 7.997919e-01	k: 1078807	n:1350000
KS ci ratio: 1.754508e-01	ci left: 3.372025e-04	ci right 4.027499e-04	k: 498	n:1350000
DDX24   1350000 perm   955 sec   (1413 perm/sec)   p_kst 3.688889e-04   p_cons 7.991163e-01   p_joint 2.740741e-04

Joint ci ratio: 2.029420e-01	ci left: 2.464396e-04	ci right 3.027833e-04	k: 372	n:1360000
Cons ci ratio: 1.685262e-03	ci left: 7.984543e-01	ci right 7.998018e-01	k: 1086815	n:1360000
KS ci ratio: 1.749258e-01	ci left: 3.368322e-04	ci right 4.020910e-04	k: 501	n:1360000
DDX24   1360000 perm   968 sec   (1406 perm/sec)   p_kst 3.683824e-04   p_cons 7.991287e-01   p_joint 2.735294e-04

Joint ci ratio: 2.021307e-01	ci left: 2.467195e-04	ci right 3.028738e-04	k: 375	n:1370000
Cons ci ratio: 1.679215e-03	ci left: 7.984346e-01	ci right 7.997772e-01	k: 1094776	n:1370000
KS ci ratio: 1.744055e-01	ci left: 3.364676e-04	ci right 4.014415e-04	k: 504	n:1370000
DDX24   1370000 perm   980 sec   (1398 perm/sec)   p_kst 3.678832e-04   p_cons 7.991066e-01   p_joint 2.737226e-04

Joint ci ratio: 2.018626e-01	ci left: 2.456197e-04	ci right 3.014404e-04	k: 376	n:1380000
Cons ci ratio: 1.673449e-03	ci left: 7.983739e-01	ci right 7.997118e-01	k: 1102680	n:1380000
KS ci ratio: 1.735484e-01	ci left: 3.374949e-04	ci right 4.023133e-04	k: 509	n:1380000
DDX24   1380000 perm   992 sec   (1391 perm/sec)   p_kst 3.688406e-04   p_cons 7.990435e-01   p_joint 2.724638e-04

Joint ci ratio: 2.010642e-01	ci left: 2.459020e-04	ci right 3.015387e-04	k: 379	n:1390000
Cons ci ratio: 1.667543e-03	ci left: 7.983523e-01	ci right 7.996853e-01	k: 1110637	n:1390000
KS ci ratio: 1.728718e-01	ci left: 3.378198e-04	ci right 4.024213e-04	k: 513	n:1390000
DDX24   1390000 perm   1004 sec   (1384 perm/sec)   p_kst 3.690647e-04   p_cons 7.990194e-01   p_joint 2.726619e-04

Joint ci ratio: 2.005372e-01	ci left: 2.455023e-04	ci right 3.008852e-04	k: 381	n:1400000
Cons ci ratio: 1.661604e-03	ci left: 7.983495e-01	ci right 7.996778e-01	k: 1118620	n:1400000
KS ci ratio: 1.722030e-01	ci left: 3.381406e-04	ci right 4.025272e-04	k: 517	n:1400000
DDX24   1400000 perm   1017 sec   (1376 perm/sec)   p_kst 3.692857e-04   p_cons 7.990143e-01   p_joint 2.721429e-04

Joint ci ratio: 1.997544e-01	ci left: 2.457822e-04	ci right 3.009854e-04	k: 384	n:1410000
Cons ci ratio: 1.656067e-03	ci left: 7.982808e-01	ci right 7.996045e-01	k: 1126510	n:1410000
KS ci ratio: 1.715419e-01	ci left: 3.384573e-04	ci right 4.026312e-04	k: 521	n:1410000
DDX24   1410000 perm   1030 sec   (1369 perm/sec)   p_kst 3.695035e-04   p_cons 7.989433e-01   p_joint 2.723404e-04

Joint ci ratio: 1.974593e-01	ci left: 2.500743e-04	ci right 3.055185e-04	k: 393	n:1420000
Cons ci ratio: 1.650459e-03	ci left: 7.982377e-01	ci right 7.995569e-01	k: 1134435	n:1420000
KS ci ratio: 1.697621e-01	ci left: 3.434895e-04	ci right 4.078727e-04	k: 532	n:1420000
DDX24   1420000 perm   1042 sec   (1362 perm/sec)   p_kst 3.746479e-04   p_cons 7.988979e-01   p_joint 2.767606e-04

Joint ci ratio: 1.964644e-01	ci left: 2.509848e-04	ci right 3.063170e-04	k: 397	n:1430000
Cons ci ratio: 1.644857e-03	ci left: 7.982050e-01	ci right 7.995197e-01	k: 1142374	n:1430000
KS ci ratio: 1.689713e-01	ci left: 3.444358e-04	ci right 4.086650e-04	k: 537	n:1430000
DDX24   1430000 perm   1055 sec   (1355 perm/sec)   p_kst 3.755245e-04   p_cons 7.988629e-01   p_joint 2.776224e-04

Joint ci ratio: 1.962182e-01	ci left: 2.499021e-04	ci right 3.049183e-04	k: 398	n:1440000
Cons ci ratio: 1.638957e-03	ci left: 7.982423e-01	ci right 7.995523e-01	k: 1150413	n:1440000
KS ci ratio: 1.686583e-01	ci left: 3.433741e-04	ci right 4.072746e-04	k: 539	n:1440000
DDX24   1440000 perm   1068 sec   (1349 perm/sec)   p_kst 3.743056e-04   p_cons 7.988979e-01   p_joint 2.763889e-04

Joint ci ratio: 1.950001e-01	ci left: 2.514581e-04	ci right 3.064323e-04	k: 403	n:1450000
Cons ci ratio: 1.633064e-03	ci left: 7.982902e-01	ci right 7.995955e-01	k: 1158468	n:1450000
KS ci ratio: 1.674224e-01	ci left: 3.462912e-04	ci right 4.102148e-04	k: 547	n:1450000
DDX24   1450000 perm   1080 sec   (1342 perm/sec)   p_kst 3.772414e-04   p_cons 7.989434e-01   p_joint 2.779310e-04

Joint ci ratio: 1.933321e-01	ci left: 2.542973e-04	ci right 3.093607e-04	k: 410	n:1460000
Cons ci ratio: 1.627345e-03	ci left: 7.983154e-01	ci right 7.996163e-01	k: 1166491	n:1460000
KS ci ratio: 1.660640e-01	ci left: 3.498266e-04	ci right 4.138264e-04	k: 556	n:1460000
DDX24   1460000 perm   1093 sec   (1336 perm/sec)   p_kst 3.808219e-04   p_cons 7.989664e-01   p_joint 2.808219e-04

Joint ci ratio: 1.923980e-01	ci left: 2.551571e-04	ci right 3.101085e-04	k: 414	n:1470000
Cons ci ratio: 1.621834e-03	ci left: 7.983111e-01	ci right 7.996075e-01	k: 1174471	n:1470000
KS ci ratio: 1.654709e-01	ci left: 3.500550e-04	ci right 4.138452e-04	k: 560	n:1470000
DDX24   1470000 perm   1106 sec   (1329 perm/sec)   p_kst 3.809524e-04   p_cons 7.989599e-01   p_joint 2.816327e-04

Joint ci ratio: 1.917063e-01	ci left: 2.553626e-04	ci right 3.101376e-04	k: 417	n:1480000
Cons ci ratio: 1.616317e-03	ci left: 7.983189e-01	ci right 7.996110e-01	k: 1182469	n:1480000
KS ci ratio: 1.650303e-01	ci left: 3.496330e-04	ci right 4.131597e-04	k: 563	n:1480000
DDX24   1480000 perm   1119 sec   (1322 perm/sec)   p_kst 3.804054e-04   p_cons 7.989655e-01   p_joint 2.817568e-04

Joint ci ratio: 1.905698e-01	ci left: 2.568439e-04	ci right 3.115722e-04	k: 422	n:1490000
Cons ci ratio: 1.610822e-03	ci left: 7.983334e-01	ci right 7.996211e-01	k: 1190477	n:1490000
KS ci ratio: 1.643035e-01	ci left: 3.505039e-04	ci right 4.138807e-04	k: 568	n:1490000
DDX24   1490000 perm   1132 sec   (1316 perm/sec)   p_kst 3.812081e-04   p_cons 7.989779e-01   p_joint 2.832215e-04

Joint ci ratio: 1.896750e-01	ci left: 2.576714e-04	ci right 3.122885e-04	k: 426	n:1500000
Cons ci ratio: 1.605430e-03	ci left: 7.983384e-01	ci right 7.996218e-01	k: 1198471	n:1500000
KS ci ratio: 1.631603e-01	ci left: 3.532820e-04	ci right 4.166731e-04	k: 576	n:1500000
DDX24   1500000 perm   1145 sec   (1310 perm/sec)   p_kst 3.840000e-04   p_cons 7.989807e-01   p_joint 2.840000e-04

Joint ci ratio: 1.894534e-01	ci left: 2.565958e-04	ci right 3.109140e-04	k: 427	n:1510000
Cons ci ratio: 1.600028e-03	ci left: 7.983559e-01	ci right 7.996350e-01	k: 1206484	n:1510000
KS ci ratio: 1.624579e-01	ci left: 3.541188e-04	ci right 4.173597e-04	k: 581	n:1510000
DDX24   1510000 perm   1159 sec   (1303 perm/sec)   p_kst 3.847682e-04   p_cons 7.989960e-01   p_joint 2.827815e-04

Joint ci ratio: 1.881391e-01	ci left: 2.586685e-04	ci right 3.130022e-04	k: 433	n:1520000
Cons ci ratio: 1.594789e-03	ci left: 7.983515e-01	ci right 7.996263e-01	k: 1214464	n:1520000
KS ci ratio: 1.613525e-01	ci left: 3.568390e-04	ci right 4.200901e-04	k: 589	n:1520000
DDX24   1520000 perm   1172 sec   (1297 perm/sec)   p_kst 3.875000e-04   p_cons 7.989895e-01   p_joint 2.848684e-04

Joint ci ratio: 1.874922e-01	ci left: 2.588464e-04	ci right 3.130093e-04	k: 436	n:1530000
Cons ci ratio: 1.589682e-03	ci left: 7.983307e-01	ci right 7.996015e-01	k: 1222419	n:1530000
KS ci ratio: 1.608083e-01	ci left: 3.570157e-04	ci right 4.200641e-04	k: 593	n:1530000
DDX24   1530000 perm   1185 sec   (1291 perm/sec)   p_kst 3.875817e-04   p_cons 7.989667e-01   p_joint 2.849673e-04

Joint ci ratio: 1.862180e-01	ci left: 2.608795e-04	ci right 3.150549e-04	k: 442	n:1540000
Cons ci ratio: 1.584463e-03	ci left: 7.983428e-01	ci right 7.996093e-01	k: 1230424	n:1540000
KS ci ratio: 1.596034e-01	ci left: 3.603073e-04	ci right 4.234146e-04	k: 602	n:1540000
DDX24   1540000 perm   1199 sec   (1285 perm/sec)   p_kst 3.909091e-04   p_cons 7.989766e-01   p_joint 2.870130e-04

Joint ci ratio: 1.857991e-01	ci left: 2.604266e-04	ci right 3.143726e-04	k: 444	n:1550000
Cons ci ratio: 1.579397e-03	ci left: 7.983340e-01	ci right 7.995965e-01	k: 1238397	n:1550000
KS ci ratio: 1.592079e-01	ci left: 3.598410e-04	ci right 4.226955e-04	k: 605	n:1550000
DDX24   1550000 perm   1212 sec   (1279 perm/sec)   p_kst 3.903226e-04   p_cons 7.989658e-01   p_joint 2.864516e-04

Joint ci ratio: 1.851759e-01	ci left: 2.605910e-04	ci right 3.143697e-04	k: 447	n:1560000
Cons ci ratio: 1.574146e-03	ci left: 7.983728e-01	ci right 7.996312e-01	k: 1246444	n:1560000
KS ci ratio: 1.585551e-01	ci left: 3.606121e-04	ci right 4.233183e-04	k: 610	n:1560000
DDX24   1560000 perm   1226 sec   (1273 perm/sec)   p_kst 3.910256e-04   p_cons 7.990026e-01   p_joint 2.865385e-04

Joint ci ratio: 1.849697e-01	ci left: 2.595386e-04	ci right 3.130337e-04	k: 448	n:1570000
Cons ci ratio: 1.568973e-03	ci left: 7.984061e-01	ci right 7.996603e-01	k: 1254483	n:1570000
KS ci ratio: 1.584257e-01	ci left: 3.589268e-04	ci right 4.212843e-04	k: 611	n:1570000
DDX24   1570000 perm   1239 sec   (1267 perm/sec)   p_kst 3.891720e-04   p_cons 7.990338e-01   p_joint 2.853503e-04

Joint ci ratio: 1.845592e-01	ci left: 2.591032e-04	ci right 3.123768e-04	k: 450	n:1580000
Cons ci ratio: 1.563939e-03	ci left: 7.984205e-01	ci right 7.996708e-01	k: 1262493	n:1580000
KS ci ratio: 1.575272e-01	ci left: 3.609104e-04	ci right 4.232233e-04	k: 618	n:1580000
DDX24   1580000 perm   1253 sec   (1261 perm/sec)   p_kst 3.911392e-04   p_cons 7.990462e-01   p_joint 2.848101e-04

Joint ci ratio: 1.841514e-01	ci left: 2.586735e-04	ci right 3.117280e-04	k: 452	n:1590000
Cons ci ratio: 1.558996e-03	ci left: 7.984260e-01	ci right 7.996723e-01	k: 1270489	n:1590000
KS ci ratio: 1.572734e-01	ci left: 3.598488e-04	ci right 4.218689e-04	k: 620	n:1590000
DDX24   1590000 perm   1267 sec   (1255 perm/sec)   p_kst 3.899371e-04   p_cons 7.990497e-01   p_joint 2.842767e-04

Joint ci ratio: 1.837462e-01	ci left: 2.582492e-04	ci right 3.110873e-04	k: 454	n:1600000
Cons ci ratio: 1.554345e-03	ci left: 7.983807e-01	ci right 7.996232e-01	k: 1278404	n:1600000
KS ci ratio: 1.570209e-01	ci left: 3.588006e-04	ci right 4.205313e-04	k: 622	n:1600000
DDX24   1600000 perm   1281 sec   (1250 perm/sec)   p_kst 3.887500e-04   p_cons 7.990025e-01   p_joint 2.837500e-04

Joint ci ratio: 1.829438e-01	ci left: 2.590156e-04	ci right 3.117534e-04	k: 458	n:1610000
Cons ci ratio: 1.549313e-03	ci left: 7.984237e-01	ci right 7.996622e-01	k: 1286460	n:1610000
KS ci ratio: 1.563945e-01	ci left: 3.595559e-04	ci right 4.211466e-04	k: 627	n:1610000
DDX24   1610000 perm   1294 sec   (1244 perm/sec)   p_kst 3.894410e-04   p_cons 7.990435e-01   p_joint 2.844720e-04

Joint ci ratio: 1.823488e-01	ci left: 2.591840e-04	ci right 3.117654e-04	k: 461	n:1620000
Cons ci ratio: 1.544436e-03	ci left: 7.984438e-01	ci right 7.996785e-01	k: 1294480	n:1620000
KS ci ratio: 1.558988e-01	ci left: 3.597090e-04	ci right 4.211124e-04	k: 631	n:1620000
DDX24   1620000 perm   1309 sec   (1238 perm/sec)   p_kst 3.895062e-04   p_cons 7.990617e-01   p_joint 2.845679e-04

Joint ci ratio: 1.817597e-01	ci left: 2.593505e-04	ci right 3.117770e-04	k: 464	n:1630000
Cons ci ratio: 1.539599e-03	ci left: 7.984650e-01	ci right 7.996959e-01	k: 1302502	n:1630000
KS ci ratio: 1.555301e-01	ci left: 3.592710e-04	ci right 4.204411e-04	k: 634	n:1630000
DDX24   1630000 perm   1323 sec   (1232 perm/sec)   p_kst 3.889571e-04   p_cons 7.990810e-01   p_joint 2.846626e-04

Joint ci ratio: 1.809828e-01	ci left: 2.600974e-04	ci right 3.124256e-04	k: 468	n:1640000
Cons ci ratio: 1.534987e-03	ci left: 7.984481e-01	ci right 7.996752e-01	k: 1310462	n:1640000
KS ci ratio: 1.550425e-01	ci left: 3.594246e-04	ci right 4.204111e-04	k: 638	n:1640000
DDX24   1640000 perm   1337 sec   (1226 perm/sec)   p_kst 3.890244e-04   p_cons 7.990622e-01   p_joint 2.853659e-04

Joint ci ratio: 1.802159e-01	ci left: 2.608357e-04	ci right 3.130658e-04	k: 472	n:1650000
Cons ci ratio: 1.530382e-03	ci left: 7.984387e-01	ci right 7.996621e-01	k: 1318434	n:1650000
KS ci ratio: 1.544394e-01	ci left: 3.601592e-04	ci right 4.210107e-04	k: 643	n:1650000
DDX24   1650000 perm   1352 sec   (1221 perm/sec)   p_kst 3.896970e-04   p_cons 7.990509e-01   p_joint 2.860606e-04

Joint ci ratio: 1.796471e-01	ci left: 2.609902e-04	ci right 3.130684e-04	k: 475	n:1660000
Cons ci ratio: 1.525727e-03	ci left: 7.984487e-01	ci right 7.996684e-01	k: 1326438	n:1660000
KS ci ratio: 1.540810e-01	ci left: 3.597271e-04	ci right 4.203515e-04	k: 646	n:1660000
DDX24   1660000 perm   1366 sec   (1215 perm/sec)   p_kst 3.891566e-04   p_cons 7.990590e-01   p_joint 2.861446e-04

Joint ci ratio: 1.790836e-01	ci left: 2.611432e-04	ci right 3.130707e-04	k: 478	n:1670000
Cons ci ratio: 1.521231e-03	ci left: 7.984339e-01	ci right 7.996500e-01	k: 1334401	n:1670000
KS ci ratio: 1.533714e-01	ci left: 3.610276e-04	ci right 4.215653e-04	k: 652	n:1670000
DDX24   1670000 perm   1380 sec   (1210 perm/sec)   p_kst 3.904192e-04   p_cons 7.990425e-01   p_joint 2.862275e-04

Joint ci ratio: 1.787110e-01	ci left: 2.607259e-04	ci right 3.124509e-04	k: 480	n:1680000
Cons ci ratio: 1.516779e-03	ci left: 7.984182e-01	ci right 7.996307e-01	k: 1342362	n:1680000
KS ci ratio: 1.530204e-01	ci left: 3.605959e-04	ci right 4.209101e-04	k: 655	n:1680000
DDX24   1680000 perm   1395 sec   (1204 perm/sec)   p_kst 3.898810e-04   p_cons 7.990250e-01   p_joint 2.857143e-04

Joint ci ratio: 1.781562e-01	ci left: 2.608790e-04	ci right 3.124564e-04	k: 483	n:1690000
Cons ci ratio: 1.512275e-03	ci left: 7.984222e-01	ci right 7.996312e-01	k: 1350356	n:1690000
KS ci ratio: 1.523252e-01	ci left: 3.618769e-04	ci right 4.221053e-04	k: 661	n:1690000
DDX24   1690000 perm   1410 sec   (1199 perm/sec)   p_kst 3.911243e-04   p_cons 7.990272e-01   p_joint 2.857988e-04

Joint ci ratio: 1.779726e-01	ci left: 2.599065e-04	ci right 3.112329e-04	k: 484	n:1700000
Cons ci ratio: 1.507802e-03	ci left: 7.984280e-01	ci right 7.996333e-01	k: 1358353	n:1700000
KS ci ratio: 1.518671e-01	ci left: 3.620116e-04	ci right 4.220647e-04	k: 665	n:1700000
DDX24   1700000 perm   1424 sec   (1194 perm/sec)   p_kst 3.911765e-04   p_cons 7.990312e-01   p_joint 2.847059e-04

Joint ci ratio: 1.774247e-01	ci left: 2.600629e-04	ci right 3.112452e-04	k: 487	n:1710000
Cons ci ratio: 1.503420e-03	ci left: 7.984226e-01	ci right 7.996244e-01	k: 1366331	n:1710000
KS ci ratio: 1.514131e-01	ci left: 3.621450e-04	ci right 4.220244e-04	k: 669	n:1710000
DDX24   1710000 perm   1439 sec   (1188 perm/sec)   p_kst 3.912281e-04   p_cons 7.990240e-01   p_joint 2.847953e-04

Joint ci ratio: 1.768818e-01	ci left: 2.602177e-04	ci right 3.112570e-04	k: 490	n:1720000
Cons ci ratio: 1.499014e-03	ci left: 7.984306e-01	ci right 7.996289e-01	k: 1374332	n:1720000
KS ci ratio: 1.509631e-01	ci left: 3.622771e-04	ci right 4.219842e-04	k: 673	n:1720000
DDX24   1720000 perm   1454 sec   (1183 perm/sec)   p_kst 3.912791e-04   p_cons 7.990302e-01   p_joint 2.848837e-04

Joint ci ratio: 1.761656e-01	ci left: 2.609236e-04	ci right 3.118720e-04	k: 494	n:1730000
Cons ci ratio: 1.494601e-03	ci left: 7.984483e-01	ci right 7.996431e-01	k: 1382350	n:1730000
KS ci ratio: 1.505171e-01	ci left: 3.624080e-04	ci right 4.219443e-04	k: 677	n:1730000
DDX24   1730000 perm   1469 sec   (1178 perm/sec)   p_kst 3.913295e-04   p_cons 7.990462e-01   p_joint 2.855491e-04

Joint ci ratio: 1.754581e-01	ci left: 2.616217e-04	ci right 3.124796e-04	k: 498	n:1740000
Cons ci ratio: 1.490312e-03	ci left: 7.984475e-01	ci right 7.996389e-01	k: 1390336	n:1740000
KS ci ratio: 1.498554e-01	ci left: 3.636439e-04	ci right 4.230971e-04	k: 683	n:1740000
DDX24   1740000 perm   1484 sec   (1173 perm/sec)   p_kst 3.925287e-04   p_cons 7.990437e-01   p_joint 2.862069e-04

Joint ci ratio: 1.749330e-01	ci left: 2.617659e-04	ci right 3.124834e-04	k: 501	n:1750000
Cons ci ratio: 1.486006e-03	ci left: 7.984581e-01	ci right 7.996460e-01	k: 1398342	n:1750000
KS ci ratio: 1.495279e-01	ci left: 3.632160e-04	ci right 4.224578e-04	k: 686	n:1750000
DDX24   1750000 perm   1499 sec   (1168 perm/sec)   p_kst 3.920000e-04   p_cons 7.990526e-01   p_joint 2.862857e-04

Joint ci ratio: 1.744126e-01	ci left: 2.619086e-04	ci right 3.124869e-04	k: 504	n:1760000
Cons ci ratio: 1.481796e-03	ci left: 7.984561e-01	ci right 7.996407e-01	k: 1406326	n:1760000
KS ci ratio: 1.489867e-01	ci left: 3.638871e-04	ci right 4.230044e-04	k: 691	n:1760000
DDX24   1760000 perm   1514 sec   (1162 perm/sec)   p_kst 3.926136e-04   p_cons 7.990489e-01   p_joint 2.863636e-04

Joint ci ratio: 1.742403e-01	ci left: 2.609692e-04	ci right 3.113110e-04	k: 505	n:1770000
Cons ci ratio: 1.477426e-03	ci left: 7.984965e-01	ci right 7.996776e-01	k: 1414385	n:1770000
KS ci ratio: 1.488793e-01	ci left: 3.623751e-04	ci right 4.212006e-04	k: 692	n:1770000
DDX24   1770000 perm   1530 sec   (1157 perm/sec)   p_kst 3.909605e-04   p_cons 7.990876e-01   p_joint 2.853107e-04

Joint ci ratio: 1.737261e-01	ci left: 2.611151e-04	ci right 3.113208e-04	k: 508	n:1780000
Cons ci ratio: 1.473437e-03	ci left: 7.984617e-01	ci right 7.996396e-01	k: 1422311	n:1780000
KS ci ratio: 1.484515e-01	ci left: 3.625029e-04	ci right 4.211650e-04	k: 696	n:1780000
DDX24   1780000 perm   1546 sec   (1152 perm/sec)   p_kst 3.910112e-04   p_cons 7.990511e-01   p_joint 2.853933e-04

Joint ci ratio: 1.727109e-01	ci left: 2.628630e-04	ci right 3.130787e-04	k: 514	n:1790000
Cons ci ratio: 1.469274e-03	ci left: 7.984726e-01	ci right 7.996471e-01	k: 1430318	n:1790000
KS ci ratio: 1.476066e-01	ci left: 3.647815e-04	ci right 4.234468e-04	k: 704	n:1790000
DDX24   1790000 perm   1562 sec   (1146 perm/sec)   p_kst 3.932961e-04   p_cons 7.990603e-01   p_joint 2.871508e-04

Joint ci ratio: 1.723766e-01	ci left: 2.624658e-04	ci right 3.124984e-04	k: 516	n:1800000
Cons ci ratio: 1.465358e-03	ci left: 7.984366e-01	ci right 7.996080e-01	k: 1438241	n:1800000
KS ci ratio: 1.471897e-01	ci left: 3.648952e-04	ci right 4.233984e-04	k: 708	n:1800000
DDX24   1800000 perm   1577 sec   (1141 perm/sec)   p_kst 3.933333e-04   p_cons 7.990228e-01   p_joint 2.866667e-04

Joint ci ratio: 1.722102e-01	ci left: 2.615443e-04	ci right 3.113482e-04	k: 517	n:1810000
Cons ci ratio: 1.461448e-03	ci left: 7.984066e-01	ci right 7.995748e-01	k: 1446174	n:1810000
KS ci ratio: 1.469826e-01	ci left: 3.639435e-04	ci right 4.222049e-04	k: 710	n:1810000
DDX24   1810000 perm   1593 sec   (1136 perm/sec)   p_kst 3.922652e-04   p_cons 7.989912e-01   p_joint 2.856354e-04

Joint ci ratio: 1.713850e-01	ci left: 2.627364e-04	ci right 3.125027e-04	k: 522	n:1820000
Cons ci ratio: 1.457472e-03	ci left: 7.983983e-01	ci right 7.995634e-01	k: 1454146	n:1820000
KS ci ratio: 1.464684e-01	ci left: 3.645903e-04	ci right 4.227331e-04	k: 715	n:1820000
DDX24   1820000 perm   1609 sec   (1131 perm/sec)   p_kst 3.928571e-04   p_cons 7.989813e-01   p_joint 2.868132e-04

Joint ci ratio: 1.708955e-01	ci left: 2.628698e-04	ci right 3.125046e-04	k: 525	n:1830000
Cons ci ratio: 1.453588e-03	ci left: 7.983771e-01	ci right 7.995389e-01	k: 1462094	n:1830000
KS ci ratio: 1.461626e-01	ci left: 3.641773e-04	ci right 4.221224e-04	k: 718	n:1830000
DDX24   1830000 perm   1624 sec   (1127 perm/sec)   p_kst 3.923497e-04   p_cons 7.989585e-01   p_joint 2.868852e-04

Joint ci ratio: 1.705716e-01	ci left: 2.624817e-04	ci right 3.119395e-04	k: 527	n:1840000
Cons ci ratio: 1.449509e-03	ci left: 7.984061e-01	ci right 7.995647e-01	k: 1470134	n:1840000
KS ci ratio: 1.457577e-01	ci left: 3.642926e-04	ci right 4.220815e-04	k: 722	n:1840000
DDX24   1840000 perm   1640 sec   (1122 perm/sec)   p_kst 3.923913e-04   p_cons 7.989859e-01   p_joint 2.864130e-04

Joint ci ratio: 1.700890e-01	ci left: 2.626154e-04	ci right 3.119441e-04	k: 530	n:1850000
Cons ci ratio: 1.445540e-03	ci left: 7.984180e-01	ci right 7.995735e-01	k: 1478143	n:1850000
KS ci ratio: 1.453561e-01	ci left: 3.644069e-04	ci right 4.220408e-04	k: 726	n:1850000
DDX24   1850000 perm   1656 sec   (1117 perm/sec)   p_kst 3.924324e-04   p_cons 7.989962e-01   p_joint 2.864865e-04

Joint ci ratio: 1.697697e-01	ci left: 2.622330e-04	ci right 3.113879e-04	k: 532	n:1860000
Cons ci ratio: 1.441711e-03	ci left: 7.984056e-01	ci right 7.995580e-01	k: 1486107	n:1860000
KS ci ratio: 1.451567e-01	ci left: 3.634839e-04	ci right 4.208861e-04	k: 728	n:1860000
DDX24   1860000 perm   1673 sec   (1112 perm/sec)   p_kst 3.913978e-04   p_cons 7.989823e-01   p_joint 2.860215e-04

Joint ci ratio: 1.694521e-01	ci left: 2.618548e-04	ci right 3.108376e-04	k: 534	n:1870000
Cons ci ratio: 1.437966e-03	ci left: 7.983815e-01	ci right 7.995309e-01	k: 1494049	n:1870000
KS ci ratio: 1.448590e-01	ci left: 3.630862e-04	ci right 4.202978e-04	k: 731	n:1870000
DDX24   1870000 perm   1689 sec   (1107 perm/sec)   p_kst 3.909091e-04   p_cons 7.989567e-01   p_joint 2.855615e-04

Joint ci ratio: 1.691363e-01	ci left: 2.614807e-04	ci right 3.102931e-04	k: 536	n:1880000
Cons ci ratio: 1.434138e-03	ci left: 7.983828e-01	ci right 7.995291e-01	k: 1502038	n:1880000
KS ci ratio: 1.444648e-01	ci left: 3.632055e-04	ci right 4.202668e-04	k: 735	n:1880000
DDX24   1880000 perm   1705 sec   (1102 perm/sec)   p_kst 3.909574e-04   p_cons 7.989564e-01   p_joint 2.851064e-04

Joint ci ratio: 1.685098e-01	ci left: 2.621242e-04	ci right 3.108571e-04	k: 540	n:1890000
Cons ci ratio: 1.430488e-03	ci left: 7.983506e-01	ci right 7.994940e-01	k: 1509964	n:1890000
KS ci ratio: 1.439765e-01	ci left: 3.638338e-04	ci right 4.207841e-04	k: 740	n:1890000
DDX24   1890000 perm   1722 sec   (1098 perm/sec)   p_kst 3.915344e-04   p_cons 7.989228e-01   p_joint 2.857143e-04

Joint ci ratio: 1.678902e-01	ci left: 2.627612e-04	ci right 3.114148e-04	k: 544	n:1900000
Cons ci ratio: 1.426804e-03	ci left: 7.983330e-01	ci right 7.994734e-01	k: 1517917	n:1900000
KS ci ratio: 1.435895e-01	ci left: 3.639484e-04	ci right 4.207504e-04	k: 744	n:1900000
DDX24   1900000 perm   1738 sec   (1093 perm/sec)   p_kst 3.915789e-04   p_cons 7.989037e-01   p_joint 2.863158e-04

Joint ci ratio: 1.672774e-01	ci left: 2.633919e-04	ci right 3.119663e-04	k: 548	n:1910000
Cons ci ratio: 1.422978e-03	ci left: 7.983539e-01	ci right 7.994913e-01	k: 1525943	n:1910000
KS ci ratio: 1.432056e-01	ci left: 3.640621e-04	ci right 4.207168e-04	k: 748	n:1910000
DDX24   1910000 perm   1754 sec   (1089 perm/sec)   p_kst 3.916230e-04   p_cons 7.989230e-01   p_joint 2.869110e-04

Joint ci ratio: 1.666713e-01	ci left: 2.640164e-04	ci right 3.125118e-04	k: 552	n:1920000
Cons ci ratio: 1.419300e-03	ci left: 7.983480e-01	ci right 7.994824e-01	k: 1533918	n:1920000
KS ci ratio: 1.428247e-01	ci left: 3.641747e-04	ci right 4.206834e-04	k: 752	n:1920000
DDX24   1920000 perm   1771 sec   (1084 perm/sec)   p_kst 3.916667e-04   p_cons 7.989156e-01   p_joint 2.875000e-04

Joint ci ratio: 1.660717e-01	ci left: 2.646347e-04	ci right 3.130513e-04	k: 556	n:1930000
Cons ci ratio: 1.415607e-03	ci left: 7.983520e-01	ci right 7.994834e-01	k: 1541912	n:1930000
KS ci ratio: 1.423528e-01	ci left: 3.647860e-04	ci right 4.211867e-04	k: 757	n:1930000
DDX24   1930000 perm   1787 sec   (1080 perm/sec)   p_kst 3.922280e-04   p_cons 7.989181e-01   p_joint 2.880829e-04

Joint ci ratio: 1.654786e-01	ci left: 2.652469e-04	ci right 3.135849e-04	k: 560	n:1940000
Cons ci ratio: 1.412025e-03	ci left: 7.983373e-01	ci right 7.994659e-01	k: 1549870	n:1940000
KS ci ratio: 1.416999e-01	ci left: 3.663858e-04	ci right 4.227520e-04	k: 764	n:1940000
DDX24   1940000 perm   1803 sec   (1076 perm/sec)   p_kst 3.938144e-04   p_cons 7.989021e-01   p_joint 2.886598e-04

Joint ci ratio: 1.651844e-01	ci left: 2.648699e-04	ci right 3.130449e-04	k: 562	n:1950000
Cons ci ratio: 1.408220e-03	ci left: 7.983798e-01	ci right 7.995054e-01	k: 1557939	n:1950000
KS ci ratio: 1.413309e-01	ci left: 3.664855e-04	ci right 4.227079e-04	k: 768	n:1950000
DDX24   1950000 perm   1820 sec   (1071 perm/sec)   p_kst 3.938462e-04   p_cons 7.989431e-01   p_joint 2.882051e-04

Joint ci ratio: 1.648918e-01	ci left: 2.644967e-04	ci right 3.125102e-04	k: 564	n:1960000
Cons ci ratio: 1.404479e-03	ci left: 7.984143e-01	ci right 7.995369e-01	k: 1565993	n:1960000
KS ci ratio: 1.410561e-01	ci left: 3.660922e-04	ci right 4.221359e-04	k: 771	n:1960000
DDX24   1960000 perm   1837 sec   (1067 perm/sec)   p_kst 3.933673e-04   p_cons 7.989760e-01   p_joint 2.877551e-04

Joint ci ratio: 1.646008e-01	ci left: 2.641275e-04	ci right 3.119809e-04	k: 566	n:1970000
Cons ci ratio: 1.400940e-03	ci left: 7.984087e-01	ci right 7.995285e-01	k: 1573969	n:1970000
KS ci ratio: 1.407828e-01	ci left: 3.657030e-04	ci right 4.215696e-04	k: 774	n:1970000
DDX24   1970000 perm   1853 sec   (1063 perm/sec)   p_kst 3.928934e-04   p_cons 7.989690e-01   p_joint 2.873096e-04

Joint ci ratio: 1.640232e-01	ci left: 2.647306e-04	ci right 3.125085e-04	k: 570	n:1980000
Cons ci ratio: 1.397351e-03	ci left: 7.984209e-01	ci right 7.995378e-01	k: 1581980	n:1980000
KS ci ratio: 1.402409e-01	ci left: 3.667798e-04	ci right 4.225772e-04	k: 780	n:1980000
DDX24   1980000 perm   1870 sec   (1059 perm/sec)   p_kst 3.939394e-04   p_cons 7.989798e-01   p_joint 2.878788e-04

Joint ci ratio: 1.637367e-01	ci left: 2.643641e-04	ci right 3.119843e-04	k: 572	n:1990000
Cons ci ratio: 1.393667e-03	ci left: 7.984611e-01	ci right 7.995752e-01	k: 1590047	n:1990000
KS ci ratio: 1.400618e-01	ci left: 3.659065e-04	ci right 4.214939e-04	k: 782	n:1990000
DDX24   1990000 perm   1886 sec   (1055 perm/sec)   p_kst 3.929648e-04   p_cons 7.990186e-01   p_joint 2.874372e-04

Joint ci ratio: 1.634518e-01	ci left: 2.640014e-04	ci right 3.114653e-04	k: 574	n:2000000
Cons ci ratio: 1.390266e-03	ci left: 7.984424e-01	ci right 7.995537e-01	k: 1597997	n:2000000
KS ci ratio: 1.396167e-01	ci left: 3.664895e-04	ci right 4.219739e-04	k: 787	n:2000000
DDX24   2000000 perm   1903 sec   (1051 perm/sec)   p_kst 3.935000e-04   p_cons 7.989985e-01   p_joint 2.870000e-04

Joint ci ratio: 1.627456e-01	ci left: 2.650740e-04	ci right 3.125047e-04	k: 579	n:2010000
Cons ci ratio: 1.386837e-03	ci left: 7.984358e-01	ci right 7.995444e-01	k: 1605971	n:2010000
KS ci ratio: 1.390005e-01	ci left: 3.680274e-04	ci right 4.234784e-04	k: 794	n:2010000
DDX24   2010000 perm   1920 sec   (1047 perm/sec)   p_kst 3.950249e-04   p_cons 7.989905e-01   p_joint 2.880597e-04

Joint ci ratio: 1.627457e-01	ci left: 2.637617e-04	ci right 3.109576e-04	k: 579	n:2020000
Cons ci ratio: 1.383539e-03	ci left: 7.984051e-01	ci right 7.995109e-01	k: 1613896	n:2020000
KS ci ratio: 1.390007e-01	ci left: 3.662055e-04	ci right 4.213820e-04	k: 794	n:2020000
DDX24   2020000 perm   1937 sec   (1043 perm/sec)   p_kst 3.930693e-04   p_cons 7.989584e-01   p_joint 2.866337e-04

Joint ci ratio: 1.624659e-01	ci left: 2.634075e-04	ci right 3.104511e-04	k: 581	n:2030000
Cons ci ratio: 1.380084e-03	ci left: 7.984165e-01	ci right 7.995196e-01	k: 1621906	n:2030000
KS ci ratio: 1.388262e-01	ci left: 3.653525e-04	ci right 4.203256e-04	k: 796	n:2030000
DDX24   2030000 perm   1954 sec   (1039 perm/sec)   p_kst 3.921182e-04   p_cons 7.989685e-01   p_joint 2.862069e-04

Joint ci ratio: 1.621875e-01	ci left: 2.630569e-04	ci right 3.099495e-04	k: 583	n:2040000
Cons ci ratio: 1.376604e-03	ci left: 7.984396e-01	ci right 7.995400e-01	k: 1629940	n:2040000
KS ci ratio: 1.385657e-01	ci left: 3.649811e-04	ci right 4.197868e-04	k: 799	n:2040000
DDX24   2040000 perm   1971 sec   (1035 perm/sec)   p_kst 3.916667e-04   p_cons 7.989902e-01   p_joint 2.857843e-04

Joint ci ratio: 1.616349e-01	ci left: 2.636458e-04	ci right 3.104677e-04	k: 587	n:2050000
Cons ci ratio: 1.373363e-03	ci left: 7.984127e-01	ci right 7.995104e-01	k: 1637872	n:2050000
KS ci ratio: 1.381347e-01	ci left: 3.655553e-04	ci right 4.202625e-04	k: 804	n:2050000
DDX24   2050000 perm   1988 sec   (1031 perm/sec)   p_kst 3.921951e-04   p_cons 7.989620e-01   p_joint 2.863415e-04

Joint ci ratio: 1.616350e-01	ci left: 2.623660e-04	ci right 3.089606e-04	k: 587	n:2060000
Cons ci ratio: 1.370188e-03	ci left: 7.983758e-01	ci right 7.994709e-01	k: 1645783	n:2060000
KS ci ratio: 1.380491e-01	ci left: 3.642494e-04	ci right 4.187246e-04	k: 805	n:2060000
DDX24   2060000 perm   2006 sec   (1027 perm/sec)   p_kst 3.907767e-04   p_cons 7.989238e-01   p_joint 2.849515e-04

Joint ci ratio: 1.612242e-01	ci left: 2.624892e-04	ci right 3.089758e-04	k: 590	n:2070000
Cons ci ratio: 1.366750e-03	ci left: 7.984065e-01	ci right 7.994989e-01	k: 1653833	n:2070000
KS ci ratio: 1.377929e-01	ci left: 3.638890e-04	ci right 4.182010e-04	k: 808	n:2070000
DDX24   2070000 perm   2023 sec   (1023 perm/sec)   p_kst 3.903382e-04   p_cons 7.989531e-01   p_joint 2.850242e-04

Joint ci ratio: 1.608165e-01	ci left: 2.626115e-04	ci right 3.089908e-04	k: 593	n:2080000
Cons ci ratio: 1.363382e-03	ci left: 7.984263e-01	ci right 7.995161e-01	k: 1661861	n:2080000
KS ci ratio: 1.375381e-01	ci left: 3.635322e-04	ci right 4.176824e-04	k: 811	n:2080000
DDX24   2080000 perm   2040 sec   (1019 perm/sec)   p_kst 3.899038e-04   p_cons 7.989716e-01   p_joint 2.850962e-04

Joint ci ratio: 1.600103e-01	ci left: 2.641105e-04	ci right 3.104983e-04	k: 599	n:2090000
Cons ci ratio: 1.360146e-03	ci left: 7.984206e-01	ci right 7.995078e-01	k: 1669836	n:2090000
KS ci ratio: 1.370327e-01	ci left: 3.645650e-04	ci right 4.186532e-04	k: 817	n:2090000
DDX24   2090000 perm   2058 sec   (1016 perm/sec)   p_kst 3.909091e-04   p_cons 7.989646e-01   p_joint 2.866029e-04

Joint ci ratio: 1.594796e-01	ci left: 2.646815e-04	ci right 3.110005e-04	k: 603	n:2100000
Cons ci ratio: 1.356943e-03	ci left: 7.984125e-01	ci right 7.994971e-01	k: 1677806	n:2100000
KS ci ratio: 1.364500e-01	ci left: 3.660483e-04	ci right 4.201069e-04	k: 824	n:2100000
DDX24   2100000 perm   2076 sec   (1011 perm/sec)   p_kst 3.923810e-04   p_cons 7.989552e-01   p_joint 2.871429e-04

Joint ci ratio: 1.592162e-01	ci left: 2.643372e-04	ci right 3.105122e-04	k: 605	n:2110000
Cons ci ratio: 1.353851e-03	ci left: 7.983837e-01	ci right 7.994657e-01	k: 1685732	n:2110000
KS ci ratio: 1.361204e-01	ci left: 3.661446e-04	ci right 4.200762e-04	k: 828	n:2110000
DDX24   2110000 perm   2094 sec   (1008 perm/sec)   p_kst 3.924171e-04   p_cons 7.989251e-01   p_joint 2.867299e-04

Joint ci ratio: 1.586933e-01	ci left: 2.649020e-04	ci right 3.110093e-04	k: 609	n:2120000
Cons ci ratio: 1.350654e-03	ci left: 7.983848e-01	ci right 7.994644e-01	k: 1693721	n:2120000
KS ci ratio: 1.354682e-01	ci left: 3.680629e-04	ci right 4.219964e-04	k: 836	n:2120000
DDX24   2120000 perm   2112 sec   (1004 perm/sec)   p_kst 3.943396e-04   p_cons 7.989250e-01   p_joint 2.872642e-04

Joint ci ratio: 1.579184e-01	ci left: 2.663637e-04	ci right 3.124776e-04	k: 615	n:2130000
Cons ci ratio: 1.347567e-03	ci left: 7.983653e-01	ci right 7.994423e-01	k: 1701666	n:2130000
KS ci ratio: 1.348253e-01	ci left: 3.699638e-04	ci right 4.238980e-04	k: 844	n:2130000
DDX24   2130000 perm   2130 sec   (1000 perm/sec)   p_kst 3.962441e-04   p_cons 7.989042e-01   p_joint 2.887324e-04

Joint ci ratio: 1.575353e-01	ci left: 2.664655e-04	ci right 3.124746e-04	k: 618	n:2140000
Cons ci ratio: 1.344403e-03	ci left: 7.983694e-01	ci right 7.994439e-01	k: 1709661	n:2140000
KS ci ratio: 1.345866e-01	ci left: 3.695896e-04	ci right 4.233662e-04	k: 847	n:2140000
DDX24   2140000 perm   2148 sec   (996 perm/sec)   p_kst 3.957944e-04   p_cons 7.989070e-01   p_joint 2.887850e-04

Joint ci ratio: 1.571549e-01	ci left: 2.665666e-04	ci right 3.124714e-04	k: 621	n:2150000
Cons ci ratio: 1.341236e-03	ci left: 7.983794e-01	ci right 7.994514e-01	k: 1717669	n:2150000
KS ci ratio: 1.341916e-01	ci left: 3.701180e-04	ci right 4.238008e-04	k: 852	n:2150000
DDX24   2150000 perm   2166 sec   (993 perm/sec)   p_kst 3.962791e-04   p_cons 7.989158e-01   p_joint 2.888372e-04

Joint ci ratio: 1.566520e-01	ci left: 2.671116e-04	ci right 3.129493e-04	k: 625	n:2160000
Cons ci ratio: 1.338140e-03	ci left: 7.983778e-01	ci right 7.994473e-01	k: 1725652	n:2160000
KS ci ratio: 1.338781e-01	ci left: 3.701943e-04	ci right 4.237526e-04	k: 856	n:2160000
DDX24   2160000 perm   2184 sec   (989 perm/sec)   p_kst 3.962963e-04   p_cons 7.989130e-01   p_joint 2.893519e-04

Joint ci ratio: 1.564024e-01	ci left: 2.667662e-04	ci right 3.124649e-04	k: 627	n:2170000
Cons ci ratio: 1.335076e-03	ci left: 7.983735e-01	ci right 7.994405e-01	k: 1733629	n:2170000
KS ci ratio: 1.336444e-01	ci left: 3.698245e-04	ci right 4.232286e-04	k: 859	n:2170000
DDX24   2170000 perm   2202 sec   (986 perm/sec)   p_kst 3.958525e-04   p_cons 7.989074e-01   p_joint 2.889401e-04

Joint ci ratio: 1.560301e-01	ci left: 2.668649e-04	ci right 3.124614e-04	k: 630	n:2180000
Cons ci ratio: 1.332043e-03	ci left: 7.983668e-01	ci right 7.994314e-01	k: 1741601	n:2180000
KS ci ratio: 1.332575e-01	ci left: 3.703451e-04	ci right 4.236573e-04	k: 864	n:2180000
DDX24   2180000 perm   2220 sec   (982 perm/sec)   p_kst 3.963303e-04   p_cons 7.988995e-01   p_joint 2.889908e-04

Joint ci ratio: 1.556605e-01	ci left: 2.669628e-04	ci right 3.124579e-04	k: 633	n:2190000
Cons ci ratio: 1.328925e-03	ci left: 7.983859e-01	ci right 7.994480e-01	k: 1749629	n:2190000
KS ci ratio: 1.330271e-01	ci left: 3.699782e-04	ci right 4.231382e-04	k: 867	n:2190000
DDX24   2190000 perm   2238 sec   (978 perm/sec)   p_kst 3.958904e-04   p_cons 7.989174e-01   p_joint 2.890411e-04

Joint ci ratio: 1.551717e-01	ci left: 2.674968e-04	ci right 3.129265e-04	k: 637	n:2200000
Cons ci ratio: 1.325950e-03	ci left: 7.983752e-01	ci right 7.994349e-01	k: 1757592	n:2200000
KS ci ratio: 1.327216e-01	ci left: 3.700543e-04	ci right 4.230935e-04	k: 871	n:2200000
DDX24   2200000 perm   2257 sec   (975 perm/sec)   p_kst 3.959091e-04   p_cons 7.989055e-01   p_joint 2.895455e-04

Joint ci ratio: 1.551718e-01	ci left: 2.662864e-04	ci right 3.115105e-04	k: 637	n:2210000
Cons ci ratio: 1.322994e-03	ci left: 7.983650e-01	ci right 7.994224e-01	k: 1765556	n:2210000
KS ci ratio: 1.327217e-01	ci left: 3.683798e-04	ci right 4.211790e-04	k: 871	n:2210000
DDX24   2210000 perm   2276 sec   (971 perm/sec)   p_kst 3.941176e-04   p_cons 7.988941e-01   p_joint 2.882353e-04

Joint ci ratio: 1.548083e-01	ci left: 2.663858e-04	ci right 3.115111e-04	k: 640	n:2220000
Cons ci ratio: 1.320149e-03	ci left: 7.983324e-01	ci right 7.993875e-01	k: 1773470	n:2220000
KS ci ratio: 1.322674e-01	ci left: 3.693336e-04	ci right 4.220741e-04	k: 877	n:2220000
DDX24   2220000 perm   2294 sec   (968 perm/sec)   p_kst 3.950450e-04   p_cons 7.988604e-01   p_joint 2.882883e-04

Joint ci ratio: 1.545674e-01	ci left: 2.660534e-04	ci right 3.110457e-04	k: 642	n:2230000
Cons ci ratio: 1.317246e-03	ci left: 7.983190e-01	ci right 7.993717e-01	k: 1781426	n:2230000
KS ci ratio: 1.320420e-01	ci left: 3.689782e-04	ci right 4.215711e-04	k: 880	n:2230000
DDX24   2230000 perm   2314 sec   (964 perm/sec)   p_kst 3.946188e-04   p_cons 7.988457e-01   p_joint 2.878924e-04

Joint ci ratio: 1.542081e-01	ci left: 2.661532e-04	ci right 3.110481e-04	k: 645	n:2240000
Cons ci ratio: 1.314203e-03	ci left: 7.983446e-01	ci right 7.993949e-01	k: 1789469	n:2240000
KS ci ratio: 1.317433e-01	ci left: 3.690577e-04	ci right 4.215337e-04	k: 884	n:2240000
DDX24   2240000 perm   2333 sec   (960 perm/sec)   p_kst 3.946429e-04   p_cons 7.988701e-01   p_joint 2.879464e-04

Joint ci ratio: 1.542082e-01	ci left: 2.649703e-04	ci right 3.096657e-04	k: 645	n:2250000
Cons ci ratio: 1.311186e-03	ci left: 7.983685e-01	ci right 7.994165e-01	k: 1797509	n:2250000
KS ci ratio: 1.316690e-01	ci left: 3.678473e-04	ci right 4.201193e-04	k: 885	n:2250000
DDX24   2250000 perm   2352 sec   (957 perm/sec)   p_kst 3.933333e-04   p_cons 7.988929e-01   p_joint 2.866667e-04

Joint ci ratio: 1.539700e-01	ci left: 2.646487e-04	ci right 3.092145e-04	k: 647	n:2260000
Cons ci ratio: 1.308267e-03	ci left: 7.983733e-01	ci right 7.994189e-01	k: 1805506	n:2260000
KS ci ratio: 1.315207e-01	ci left: 3.670754e-04	ci right 4.191745e-04	k: 887	n:2260000
DDX24   2260000 perm   2371 sec   (953 perm/sec)   p_kst 3.924779e-04   p_cons 7.988965e-01   p_joint 2.862832e-04

Joint ci ratio: 1.497529e-01	ci left: 2.791633e-04	ci right 3.247705e-04	k: 684	n:2270000
Cons ci ratio: 1.305366e-03	ci left: 7.983784e-01	ci right 7.994217e-01	k: 1813504	n:2270000
KS ci ratio: 1.311520e-01	ci left: 3.675886e-04	ci right 4.196028e-04	k: 892	n:2270000
DDX24   2270000 perm   2390 sec   (950 perm/sec)   p_kst 3.929515e-04   p_cons 7.989004e-01   p_joint 3.013216e-04

Joint ci ratio: 1.493175e-01	ci left: 2.796277e-04	ci right 3.251660e-04	k: 688	n:2280000
Cons ci ratio: 1.302517e-03	ci left: 7.983756e-01	ci right 7.994166e-01	k: 1821484	n:2280000
KS ci ratio: 1.308592e-01	ci left: 3.676733e-04	ci right 4.195743e-04	k: 896	n:2280000
DDX24   2280000 perm   2409 sec   (946 perm/sec)   p_kst 3.929825e-04   p_cons 7.988965e-01   p_joint 3.017544e-04

Joint ci ratio: 1.493176e-01	ci left: 2.784066e-04	ci right 3.237461e-04	k: 688	n:2290000
Cons ci ratio: 1.299534e-03	ci left: 7.984104e-01	ci right 7.994491e-01	k: 1829550	n:2290000
KS ci ratio: 1.308593e-01	ci left: 3.660677e-04	ci right 4.177421e-04	k: 896	n:2290000
DDX24   2290000 perm   2428 sec   (943 perm/sec)   p_kst 3.912664e-04   p_cons 7.989301e-01   p_joint 3.004367e-04

Joint ci ratio: 1.489936e-01	ci left: 2.784518e-04	ci right 3.236915e-04	k: 691	n:2300000
Cons ci ratio: 1.296718e-03	ci left: 7.984084e-01	ci right 7.994448e-01	k: 1837532	n:2300000
KS ci ratio: 1.304238e-01	ci left: 3.669996e-04	ci right 4.186198e-04	k: 902	n:2300000
DDX24   2300000 perm   2447 sec   (940 perm/sec)   p_kst 3.921739e-04   p_cons 7.989270e-01   p_joint 3.004348e-04

Joint ci ratio: 1.488861e-01	ci left: 2.776631e-04	ci right 3.227393e-04	k: 692	n:2310000
Cons ci ratio: 1.293862e-03	ci left: 7.984211e-01	ci right 7.994552e-01	k: 1845548	n:2310000
KS ci ratio: 1.300642e-01	ci left: 3.675048e-04	ci right 4.190425e-04	k: 907	n:2310000
DDX24   2310000 perm   2467 sec   (936 perm/sec)   p_kst 3.926407e-04   p_cons 7.989385e-01   p_joint 2.995671e-04

Joint ci ratio: 1.487789e-01	ci left: 2.768813e-04	ci right 3.217952e-04	k: 693	n:2320000
Cons ci ratio: 1.290998e-03	ci left: 7.984402e-01	ci right 7.994720e-01	k: 1853579	n:2320000
KS ci ratio: 1.297786e-01	ci left: 3.675889e-04	ci right 4.190165e-04	k: 911	n:2320000
DDX24   2320000 perm   2486 sec   (933 perm/sec)   p_kst 3.926724e-04   p_cons 7.989565e-01   p_joint 2.987069e-04

Joint ci ratio: 1.485650e-01	ci left: 2.765194e-04	ci right 3.213044e-04	k: 695	n:2330000
Cons ci ratio: 1.288107e-03	ci left: 7.984707e-01	ci right 7.995003e-01	k: 1861637	n:2330000
KS ci ratio: 1.296366e-01	ci left: 3.668417e-04	ci right 4.181043e-04	k: 913	n:2330000
DDX24   2330000 perm   2506 sec   (930 perm/sec)   p_kst 3.918455e-04   p_cons 7.989858e-01   p_joint 2.982833e-04

Joint ci ratio: 1.482458e-01	ci left: 2.765721e-04	ci right 3.212610e-04	k: 698	n:2340000
Cons ci ratio: 1.285440e-03	ci left: 7.984496e-01	ci right 7.994770e-01	k: 1869575	n:2340000
KS ci ratio: 1.292131e-01	ci left: 3.677551e-04	ci right 4.189646e-04	k: 919	n:2340000
DDX24   2340000 perm   2526 sec   (926 perm/sec)   p_kst 3.927350e-04   p_cons 7.989637e-01   p_joint 2.982906e-04

Joint ci ratio: 1.518754e-01	ci left: 2.618797e-04	ci right 3.053247e-04	k: 665	n:2350000
Cons ci ratio: 1.282734e-03	ci left: 7.984427e-01	ci right 7.994680e-01	k: 1877546	n:2350000
KS ci ratio: 1.288634e-01	ci left: 3.682492e-04	ci right 4.193781e-04	k: 924	n:2350000
DDX24   2350000 perm   2547 sec   (923 perm/sec)   p_kst 3.931915e-04   p_cons 7.989557e-01   p_joint 2.829787e-04

Joint ci ratio: 1.516479e-01	ci left: 2.615853e-04	ci right 3.049106e-04	k: 667	n:2360000
Cons ci ratio: 1.280195e-03	ci left: 7.983982e-01	ci right 7.994214e-01	k: 1885428	n:2360000
KS ci ratio: 1.287244e-01	ci left: 3.675090e-04	ci right 4.184758e-04	k: 926	n:2360000
DDX24   2360000 perm   2567 sec   (919 perm/sec)   p_kst 3.923729e-04   p_cons 7.989102e-01   p_joint 2.826271e-04

Joint ci ratio: 1.511958e-01	ci left: 2.621054e-04	ci right 3.053757e-04	k: 671	n:2370000
Cons ci ratio: 1.277463e-03	ci left: 7.984064e-01	ci right 7.994274e-01	k: 1893434	n:2370000
KS ci ratio: 1.283786e-01	ci left: 3.680002e-04	ci right 4.188876e-04	k: 931	n:2370000
DDX24   2370000 perm   2587 sec   (916 perm/sec)   p_kst 3.928270e-04   p_cons 7.989173e-01   p_joint 2.831224e-04

Joint ci ratio: 1.468862e-01	ci left: 2.771844e-04	ci right 3.215253e-04	k: 711	n:2380000
Cons ci ratio: 1.274690e-03	ci left: 7.984293e-01	ci right 7.994481e-01	k: 1901475	n:2380000
KS ci ratio: 1.280356e-01	ci left: 3.684874e-04	ci right 4.192957e-04	k: 936	n:2380000
DDX24   2380000 perm   2607 sec   (913 perm/sec)   p_kst 3.932773e-04   p_cons 7.989391e-01   p_joint 2.987395e-04

Joint ci ratio: 1.464753e-01	ci left: 2.776368e-04	ci right 3.219150e-04	k: 715	n:2390000
Cons ci ratio: 1.272076e-03	ci left: 7.984164e-01	ci right 7.994331e-01	k: 1909431	n:2390000
KS ci ratio: 1.277632e-01	ci left: 3.685657e-04	ci right 4.192685e-04	k: 940	n:2390000
DDX24   2390000 perm   2627 sec   (910 perm/sec)   p_kst 3.933054e-04   p_cons 7.989251e-01   p_joint 2.991632e-04

Joint ci ratio: 1.463732e-01	ci left: 2.768814e-04	ci right 3.210057e-04	k: 716	n:2400000
Cons ci ratio: 1.269377e-03	ci left: 7.984290e-01	ci right 7.994436e-01	k: 1917448	n:2400000
KS ci ratio: 1.276954e-01	ci left: 3.674334e-04	ci right 4.179516e-04	k: 941	n:2400000
DDX24   2400000 perm   2647 sec   (907 perm/sec)   p_kst 3.920833e-04   p_cons 7.989367e-01   p_joint 2.983333e-04

Joint ci ratio: 1.460679e-01	ci left: 2.769318e-04	ci right 3.209640e-04	k: 719	n:2410000
Cons ci ratio: 1.266799e-03	ci left: 7.984154e-01	ci right 7.994279e-01	k: 1925402	n:2410000
KS ci ratio: 1.274926e-01	ci left: 3.671138e-04	ci right 4.175019e-04	k: 944	n:2410000
DDX24   2410000 perm   2667 sec   (904 perm/sec)   p_kst 3.917012e-04   p_cons 7.989220e-01   p_joint 2.983402e-04

Joint ci ratio: 1.457646e-01	ci left: 2.769819e-04	ci right 3.209226e-04	k: 722	n:2420000
Cons ci ratio: 1.322359e-03	ci left: 7.835575e-01	ci right 7.845947e-01	k: 1897465	n:2420000
KS ci ratio: 1.272236e-01	ci left: 3.671971e-04	ci right 4.174822e-04	k: 948	n:2420000
DDX24   2420000 perm   2687 sec   (901 perm/sec)   p_kst 3.917355e-04   p_cons 7.840764e-01   p_joint 2.983471e-04

Joint ci ratio: 1.454631e-01	ci left: 2.770316e-04	ci right 3.208814e-04	k: 725	n:2430000
Cons ci ratio: 1.319694e-03	ci left: 7.835434e-01	ci right 7.845785e-01	k: 1905269	n:2430000
KS ci ratio: 1.269563e-01	ci left: 3.672797e-04	ci right 4.174625e-04	k: 952	n:2430000
DDX24   2430000 perm   2708 sec   (897 perm/sec)   p_kst 3.917695e-04   p_cons 7.840613e-01   p_joint 2.983539e-04

Joint ci ratio: 1.453631e-01	ci left: 2.762912e-04	ci right 3.199911e-04	k: 726	n:2440000
Cons ci ratio: 1.316916e-03	ci left: 7.835627e-01	ci right 7.845956e-01	k: 1913154	n:2440000
KS ci ratio: 1.268898e-01	ci left: 3.661713e-04	ci right 4.161745e-04	k: 953	n:2440000
DDX24   2440000 perm   2728 sec   (894 perm/sec)   p_kst 3.905738e-04   p_cons 7.840795e-01   p_joint 2.975410e-04

Joint ci ratio: 1.489950e-01	ci left: 2.614036e-04	ci right 3.038739e-04	k: 691	n:2450000
Cons ci ratio: 1.314206e-03	ci left: 7.835687e-01	ci right 7.845996e-01	k: 1921007	n:2450000
KS ci ratio: 1.266247e-01	ci left: 3.662576e-04	ci right 4.161602e-04	k: 957	n:2450000
DDX24   2450000 perm   2748 sec   (892 perm/sec)   p_kst 3.906122e-04   p_cons 7.840845e-01   p_joint 2.820408e-04

Joint ci ratio: 1.449649e-01	ci left: 2.756118e-04	ci right 3.190746e-04	k: 730	n:2460000
Cons ci ratio: 1.311561e-03	ci left: 7.835625e-01	ci right 7.845913e-01	k: 1928830	n:2460000
KS ci ratio: 1.264269e-01	ci left: 3.659496e-04	ci right 4.157266e-04	k: 960	n:2460000
DDX24   2460000 perm   2769 sec   (888 perm/sec)   p_kst 3.902439e-04   p_cons 7.840772e-01   p_joint 2.967480e-04

Joint ci ratio: 1.447670e-01	ci left: 2.752764e-04	ci right 3.186218e-04	k: 732	n:2470000
Cons ci ratio: 1.308837e-03	ci left: 7.835807e-01	ci right 7.846073e-01	k: 1936713	n:2470000
KS ci ratio: 1.261646e-01	ci left: 3.660363e-04	ci right 4.157140e-04	k: 964	n:2470000
DDX24   2470000 perm   2789 sec   (886 perm/sec)   p_kst 3.902834e-04   p_cons 7.840943e-01   p_joint 2.963563e-04

Joint ci ratio: 1.444716e-01	ci left: 2.753323e-04	ci right 3.185905e-04	k: 735	n:2480000
Cons ci ratio: 1.306306e-03	ci left: 7.835531e-01	ci right 7.845777e-01	k: 1944483	n:2480000
KS ci ratio: 1.259690e-01	ci left: 3.657319e-04	ci right 4.152856e-04	k: 967	n:2480000
DDX24   2480000 perm   2810 sec   (883 perm/sec)   p_kst 3.899194e-04   p_cons 7.840657e-01   p_joint 2.963710e-04

Joint ci ratio: 1.443737e-01	ci left: 2.746136e-04	ci right 3.177271e-04	k: 736	n:2490000
Cons ci ratio: 1.303706e-03	ci left: 7.835474e-01	ci right 7.845700e-01	k: 1952307	n:2490000
KS ci ratio: 1.259040e-01	ci left: 3.646520e-04	ci right 4.140320e-04	k: 968	n:2490000
DDX24   2490000 perm   2831 sec   (880 perm/sec)   p_kst 3.887550e-04   p_cons 7.840590e-01   p_joint 2.955823e-04

Joint ci ratio: 1.481413e-01	ci left: 2.592565e-04	ci right 3.011153e-04	k: 699	n:2500000
Cons ci ratio: 1.301092e-03	ci left: 7.835494e-01	ci right 7.845699e-01	k: 1960150	n:2500000
KS ci ratio: 1.257743e-01	ci left: 3.639683e-04	ci right 4.132011e-04	k: 970	n:2500000
DDX24   2500000 perm   2851 sec   (877 perm/sec)   p_kst 3.880000e-04   p_cons 7.840600e-01   p_joint 2.796000e-04

Joint ci ratio: 1.479301e-01	ci left: 2.589909e-04	ci right 3.007419e-04	k: 701	n:2510000
Cons ci ratio: 1.298486e-03	ci left: 7.835534e-01	ci right 7.845719e-01	k: 1967998	n:2510000
KS ci ratio: 1.256450e-01	ci left: 3.632899e-04	ci right 4.123767e-04	k: 972	n:2510000
DDX24   2510000 perm   2872 sec   (874 perm/sec)   p_kst 3.872510e-04   p_cons 7.840629e-01   p_joint 2.792829e-04

Joint ci ratio: 1.474061e-01	ci left: 2.598740e-04	ci right 3.016059e-04	k: 706	n:2520000
Cons ci ratio: 1.295920e-03	ci left: 7.835510e-01	ci right 7.845674e-01	k: 1975830	n:2520000
KS ci ratio: 1.253234e-01	ci left: 3.637702e-04	ci right 4.127867e-04	k: 977	n:2520000
DDX24   2520000 perm   2894 sec   (871 perm/sec)   p_kst 3.876984e-04   p_cons 7.840595e-01   p_joint 2.801587e-04

Joint ci ratio: 1.470943e-01	ci left: 2.599889e-04	ci right 3.016432e-04	k: 709	n:2530000
Cons ci ratio: 1.293312e-03	ci left: 7.835636e-01	ci right 7.845780e-01	k: 1983700	n:2530000
KS ci ratio: 1.249407e-01	ci left: 3.646296e-04	ci right 4.136009e-04	k: 983	n:2530000
DDX24   2530000 perm   2915 sec   (868 perm/sec)   p_kst 3.885375e-04   p_cons 7.840711e-01   p_joint 2.802372e-04

Joint ci ratio: 1.468876e-01	ci left: 2.597238e-04	ci right 3.012720e-04	k: 711	n:2540000
Cons ci ratio: 1.290774e-03	ci left: 7.835620e-01	ci right 7.845744e-01	k: 1991534	n:2540000
KS ci ratio: 1.248140e-01	ci left: 3.639569e-04	ci right 4.127845e-04	k: 985	n:2540000
DDX24   2540000 perm   2936 sec   (865 perm/sec)   p_kst 3.877953e-04   p_cons 7.840685e-01   p_joint 2.799213e-04

Joint ci ratio: 1.465791e-01	ci left: 2.598385e-04	ci right 3.013101e-04	k: 714	n:2550000
Cons ci ratio: 1.288249e-03	ci left: 7.835607e-01	ci right 7.845712e-01	k: 1999369	n:2550000
KS ci ratio: 1.246245e-01	ci left: 3.636694e-04	ci right 4.123789e-04	k: 988	n:2550000
DDX24   2550000 perm   2957 sec   (862 perm/sec)   p_kst 3.874510e-04   p_cons 7.840663e-01   p_joint 2.800000e-04

Joint ci ratio: 1.457658e-01	ci left: 2.618343e-04	ci right 3.033723e-04	k: 722	n:2560000
Cons ci ratio: 1.285668e-03	ci left: 7.835783e-01	ci right 7.845867e-01	k: 2007252	n:2560000
KS ci ratio: 1.241234e-01	ci left: 3.652766e-04	ci right 4.139902e-04	k: 996	n:2560000
DDX24   2560000 perm   2979 sec   (859 perm/sec)   p_kst 3.890625e-04   p_cons 7.840828e-01   p_joint 2.820313e-04

Joint ci ratio: 1.454643e-01	ci left: 2.619403e-04	ci right 3.034017e-04	k: 725	n:2570000
Cons ci ratio: 1.283010e-03	ci left: 7.836198e-01	ci right 7.846262e-01	k: 2015197	n:2570000
KS ci ratio: 1.239371e-01	ci left: 3.649864e-04	ci right 4.135829e-04	k: 999	n:2570000
DDX24   2570000 perm   3000 sec   (857 perm/sec)   p_kst 3.887160e-04   p_cons 7.841233e-01   p_joint 2.821012e-04

Joint ci ratio: 1.453642e-01	ci left: 2.612985e-04	ci right 3.026274e-04	k: 726	n:2580000
Cons ci ratio: 1.280478e-03	ci left: 7.836323e-01	ci right 7.846368e-01	k: 2023068	n:2580000
KS ci ratio: 1.238134e-01	ci left: 3.643229e-04	ci right 4.127790e-04	k: 1001	n:2580000
DDX24   2580000 perm   3021 sec   (854 perm/sec)   p_kst 3.879845e-04   p_cons 7.841349e-01   p_joint 2.813953e-04

Joint ci ratio: 1.450652e-01	ci left: 2.614058e-04	ci right 3.026593e-04	k: 729	n:2590000
Cons ci ratio: 1.277969e-03	ci left: 7.836425e-01	ci right 7.846449e-01	k: 2030933	n:2590000
KS ci ratio: 1.235056e-01	ci left: 3.647870e-04	ci right 4.131755e-04	k: 1006	n:2590000
DDX24   2590000 perm   3043 sec   (851 perm/sec)   p_kst 3.884170e-04   p_cons 7.841440e-01   p_joint 2.814672e-04

Joint ci ratio: 1.448669e-01	ci left: 2.611417e-04	ci right 3.022924e-04	k: 731	n:2600000
Cons ci ratio: 1.275494e-03	ci left: 7.836475e-01	ci right 7.846480e-01	k: 2038785	n:2600000
KS ci ratio: 1.233221e-01	ci left: 3.645022e-04	ci right 4.127758e-04	k: 1009	n:2600000
DDX24   2600000 perm   3064 sec   (849 perm/sec)   p_kst 3.880769e-04   p_cons 7.841481e-01   p_joint 2.811538e-04

Joint ci ratio: 1.444727e-01	ci left: 2.616183e-04	ci right 3.027222e-04	k: 735	n:2610000
Cons ci ratio: 1.273007e-03	ci left: 7.836594e-01	ci right 7.846580e-01	k: 2046655	n:2610000
KS ci ratio: 1.230180e-01	ci left: 3.649623e-04	ci right 4.131690e-04	k: 1014	n:2610000
DDX24   2610000 perm   3086 sec   (846 perm/sec)   p_kst 3.885057e-04   p_cons 7.841590e-01   p_joint 2.816092e-04

Joint ci ratio: 1.444728e-01	ci left: 2.606197e-04	ci right 3.015668e-04	k: 735	n:2620000
Cons ci ratio: 1.270473e-03	ci left: 7.836876e-01	ci right 7.846843e-01	k: 2054568	n:2620000
KS ci ratio: 1.230180e-01	ci left: 3.635693e-04	ci right 4.115920e-04	k: 1014	n:2620000
DDX24   2620000 perm   3107 sec   (843 perm/sec)   p_kst 3.870229e-04   p_cons 7.841863e-01   p_joint 2.805344e-04

Joint ci ratio: 1.440818e-01	ci left: 2.610948e-04	ci right 3.019959e-04	k: 739	n:2630000
Cons ci ratio: 1.268002e-03	ci left: 7.837027e-01	ci right 7.846974e-01	k: 2062447	n:2630000
KS ci ratio: 1.227161e-01	ci left: 3.640296e-04	ci right 4.119866e-04	k: 1019	n:2630000
DDX24   2630000 perm   3129 sec   (840 perm/sec)   p_kst 3.874525e-04   p_cons 7.842004e-01   p_joint 2.809886e-04

Joint ci ratio: 1.440818e-01	ci left: 2.601058e-04	ci right 3.008520e-04	k: 739	n:2640000
Cons ci ratio: 1.265685e-03	ci left: 7.836805e-01	ci right 7.846734e-01	k: 2070228	n:2640000
KS ci ratio: 1.226561e-01	ci left: 3.630179e-04	ci right 4.108164e-04	k: 1020	n:2640000
DDX24   2640000 perm   3151 sec   (838 perm/sec)   p_kst 3.863636e-04   p_cons 7.841773e-01   p_joint 2.799242e-04

Joint ci ratio: 1.436940e-01	ci left: 2.605794e-04	ci right 3.012804e-04	k: 743	n:2650000
Cons ci ratio: 1.263289e-03	ci left: 7.836831e-01	ci right 7.846741e-01	k: 2078074	n:2650000
KS ci ratio: 1.223568e-01	ci left: 3.634770e-04	ci right 4.112107e-04	k: 1025	n:2650000
DDX24   2650000 perm   3172 sec   (835 perm/sec)   p_kst 3.867925e-04   p_cons 7.841789e-01   p_joint 2.803774e-04

Joint ci ratio: 1.435975e-01	ci left: 2.599622e-04	ci right 3.005372e-04	k: 744	n:2660000
Cons ci ratio: 1.261001e-03	ci left: 7.836600e-01	ci right 7.846492e-01	k: 2085852	n:2660000
KS ci ratio: 1.222973e-01	ci left: 3.624750e-04	ci right 4.100523e-04	k: 1026	n:2660000
DDX24   2660000 perm   3194 sec   (833 perm/sec)   p_kst 3.857143e-04   p_cons 7.841549e-01   p_joint 2.796992e-04

Joint ci ratio: 1.433093e-01	ci left: 2.600718e-04	ci right 3.005755e-04	k: 747	n:2670000
Cons ci ratio: 1.258658e-03	ci left: 7.836555e-01	ci right 7.846428e-01	k: 2093679	n:2670000
KS ci ratio: 1.221191e-01	ci left: 3.622066e-04	ci right 4.096744e-04	k: 1029	n:2670000
DDX24   2670000 perm   3215 sec   (830 perm/sec)   p_kst 3.853933e-04   p_cons 7.841494e-01   p_joint 2.797753e-04

Joint ci ratio: 1.430228e-01	ci left: 2.601807e-04	ci right 3.006134e-04	k: 750	n:2680000
Cons ci ratio: 1.256354e-03	ci left: 7.836439e-01	ci right 7.846294e-01	k: 2101487	n:2680000
KS ci ratio: 1.219417e-01	ci left: 3.619403e-04	ci right 4.092994e-04	k: 1032	n:2680000
DDX24   2680000 perm   3238 sec   (828 perm/sec)   p_kst 3.850746e-04   p_cons 7.841369e-01   p_joint 2.798507e-04

Joint ci ratio: 1.427379e-01	ci left: 2.602888e-04	ci right 3.006510e-04	k: 753	n:2690000
Cons ci ratio: 1.253966e-03	ci left: 7.836584e-01	ci right 7.846421e-01	k: 2109365	n:2690000
KS ci ratio: 1.217063e-01	ci left: 3.620365e-04	ci right 4.093101e-04	k: 1036	n:2690000
DDX24   2690000 perm   3260 sec   (825 perm/sec)   p_kst 3.851301e-04   p_cons 7.841506e-01   p_joint 2.799257e-04

Joint ci ratio: 1.424548e-01	ci left: 2.603963e-04	ci right 3.006882e-04	k: 756	n:2700000
Cons ci ratio: 1.251592e-03	ci left: 7.836729e-01	ci right 7.846547e-01	k: 2117243	n:2700000
KS ci ratio: 1.213556e-01	ci left: 3.628503e-04	ci right 4.100839e-04	k: 1042	n:2700000
DDX24   2700000 perm   3283 sec   (823 perm/sec)   p_kst 3.859259e-04   p_cons 7.841641e-01   p_joint 2.800000e-04

Joint ci ratio: 1.422670e-01	ci left: 2.601471e-04	ci right 3.003429e-04	k: 758	n:2710000
Cons ci ratio: 1.249168e-03	ci left: 7.837042e-01	ci right 7.846841e-01	k: 2125167	n:2710000
KS ci ratio: 1.211236e-01	ci left: 3.629426e-04	ci right 4.100914e-04	k: 1046	n:2710000
DDX24   2710000 perm   3304 sec   (820 perm/sec)   p_kst 3.859779e-04   p_cons 7.841945e-01   p_joint 2.797048e-04

Joint ci ratio: 1.419867e-01	ci left: 2.602544e-04	ci right 3.003809e-04	k: 761	n:2720000
Cons ci ratio: 1.246922e-03	ci left: 7.836908e-01	ci right 7.846689e-01	k: 2132970	n:2720000
KS ci ratio: 1.207780e-01	ci left: 3.637474e-04	ci right 4.108563e-04	k: 1052	n:2720000
DDX24   2720000 perm   3327 sec   (818 perm/sec)   p_kst 3.867647e-04   p_cons 7.841801e-01   p_joint 2.797794e-04

Joint ci ratio: 1.418937e-01	ci left: 2.596544e-04	ci right 2.996599e-04	k: 762	n:2730000
Cons ci ratio: 1.244665e-03	ci left: 7.836840e-01	ci right 7.846604e-01	k: 2140791	n:2730000
KS ci ratio: 1.206635e-01	ci left: 3.631255e-04	ci right 4.101060e-04	k: 1054	n:2730000
DDX24   2730000 perm   3350 sec   (815 perm/sec)   p_kst 3.860806e-04   p_cons 7.841725e-01   p_joint 2.791209e-04

Joint ci ratio: 1.416155e-01	ci left: 2.597628e-04	ci right 2.996999e-04	k: 765	n:2740000
Cons ci ratio: 1.242369e-03	ci left: 7.836909e-01	ci right 7.846655e-01	k: 2148649	n:2740000
KS ci ratio: 1.204354e-01	ci left: 3.632161e-04	ci right 4.101131e-04	k: 1058	n:2740000
DDX24   2740000 perm   3372 sec   (813 perm/sec)   p_kst 3.861314e-04   p_cons 7.841785e-01   p_joint 2.791971e-04

Joint ci ratio: 1.414310e-01	ci left: 2.595198e-04	ci right 2.993631e-04	k: 767	n:2750000
Cons ci ratio: 1.240040e-03	ci left: 7.837104e-01	ci right 7.846832e-01	k: 2156542	n:2750000
KS ci ratio: 1.200956e-01	ci left: 3.640115e-04	ci right 4.108692e-04	k: 1064	n:2750000
DDX24   2750000 perm   3394 sec   (810 perm/sec)   p_kst 3.869091e-04   p_cons 7.841971e-01   p_joint 2.789091e-04

Joint ci ratio: 1.414311e-01	ci left: 2.585795e-04	ci right 2.982785e-04	k: 767	n:2760000
Cons ci ratio: 1.237749e-03	ci left: 7.837229e-01	ci right 7.846939e-01	k: 2164416	n:2760000
KS ci ratio: 1.200957e-01	ci left: 3.626926e-04	ci right 4.093806e-04	k: 1064	n:2760000
DDX24   2760000 perm   3417 sec   (808 perm/sec)   p_kst 3.855072e-04   p_cons 7.842087e-01   p_joint 2.778986e-04

Joint ci ratio: 1.410642e-01	ci left: 2.590390e-04	ci right 2.986967e-04	k: 771	n:2770000
Cons ci ratio: 1.235518e-03	ci left: 7.837223e-01	ci right 7.846915e-01	k: 2172254	n:2770000
KS ci ratio: 1.198147e-01	ci left: 3.631341e-04	ci right 4.097619e-04	k: 1069	n:2770000
DDX24   2770000 perm   3440 sec   (805 perm/sec)   p_kst 3.859206e-04   p_cons 7.842072e-01   p_joint 2.783394e-04

Joint ci ratio: 1.409730e-01	ci left: 2.584542e-04	ci right 2.979946e-04	k: 772	n:2780000
Cons ci ratio: 1.233267e-03	ci left: 7.837307e-01	ci right 7.846982e-01	k: 2180117	n:2780000
KS ci ratio: 1.197029e-01	ci left: 3.625257e-04	ci right 4.090289e-04	k: 1071	n:2780000
DDX24   2780000 perm   3463 sec   (803 perm/sec)   p_kst 3.852518e-04   p_cons 7.842147e-01   p_joint 2.776978e-04

Joint ci ratio: 1.406096e-01	ci left: 2.589110e-04	ci right 2.984107e-04	k: 776	n:2790000
Cons ci ratio: 1.231104e-03	ci left: 7.837179e-01	ci right 7.846837e-01	k: 2187921	n:2790000
KS ci ratio: 1.194247e-01	ci left: 3.629649e-04	ci right 4.094085e-04	k: 1076	n:2790000
DDX24   2790000 perm   3487 sec   (800 perm/sec)   p_kst 3.856631e-04   p_cons 7.842011e-01   p_joint 2.781362e-04

Joint ci ratio: 1.404290e-01	ci left: 2.586755e-04	ci right 2.980843e-04	k: 778	n:2800000
Cons ci ratio: 1.228772e-03	ci left: 7.837552e-01	ci right 7.847192e-01	k: 2195865	n:2800000
KS ci ratio: 1.193140e-01	ci left: 3.623615e-04	ci right 4.086820e-04	k: 1078	n:2800000
DDX24   2800000 perm   3510 sec   (798 perm/sec)   p_kst 3.850000e-04   p_cons 7.842375e-01   p_joint 2.778571e-04

Joint ci ratio: 1.403390e-01	ci left: 2.580983e-04	ci right 2.973919e-04	k: 779	n:2810000
Cons ci ratio: 1.226566e-03	ci left: 7.837609e-01	ci right 7.847232e-01	k: 2203721	n:2810000
KS ci ratio: 1.192037e-01	ci left: 3.617625e-04	ci right 4.079605e-04	k: 1080	n:2810000
DDX24   2810000 perm   3533 sec   (795 perm/sec)   p_kst 3.843416e-04   p_cons 7.842423e-01   p_joint 2.772242e-04

Joint ci ratio: 1.403391e-01	ci left: 2.571831e-04	ci right 2.963373e-04	k: 779	n:2820000
Cons ci ratio: 1.224369e-03	ci left: 7.837673e-01	ci right 7.847279e-01	k: 2211579	n:2820000
KS ci ratio: 1.192037e-01	ci left: 3.604796e-04	ci right 4.065139e-04	k: 1080	n:2820000
DDX24   2820000 perm   3556 sec   (793 perm/sec)   p_kst 3.829787e-04   p_cons 7.842479e-01   p_joint 2.762411e-04

Joint ci ratio: 1.400700e-01	ci left: 2.572972e-04	ci right 2.963875e-04	k: 782	n:2830000
Cons ci ratio: 1.222290e-03	ci left: 7.837443e-01	ci right 7.847032e-01	k: 2219354	n:2830000
KS ci ratio: 1.189290e-01	ci left: 3.609200e-04	ci right 4.068968e-04	k: 1085	n:2830000
DDX24   2830000 perm   3579 sec   (791 perm/sec)   p_kst 3.833922e-04   p_cons 7.842240e-01   p_joint 2.763251e-04

Joint ci ratio: 1.398914e-01	ci left: 2.570708e-04	ci right 2.960727e-04	k: 784	n:2840000
Cons ci ratio: 1.220148e-03	ci left: 7.837419e-01	ci right 7.846991e-01	k: 2227187	n:2840000
KS ci ratio: 1.188197e-01	ci left: 3.603325e-04	ci right 4.061892e-04	k: 1087	n:2840000
DDX24   2840000 perm   3603 sec   (788 perm/sec)   p_kst 3.827465e-04   p_cons 7.842208e-01   p_joint 2.760563e-04

Joint ci ratio: 1.395364e-01	ci left: 2.575232e-04	ci right 2.964864e-04	k: 788	n:2850000
Cons ci ratio: 1.218056e-03	ci left: 7.837286e-01	ci right 7.846841e-01	k: 2234989	n:2850000
KS ci ratio: 1.186018e-01	ci left: 3.604300e-04	ci right 4.062092e-04	k: 1091	n:2850000
DDX24   2850000 perm   3627 sec   (786 perm/sec)   p_kst 3.828070e-04   p_cons 7.842067e-01   p_joint 2.764912e-04

Joint ci ratio: 1.392718e-01	ci left: 2.576352e-04	ci right 2.965352e-04	k: 791	n:2860000
Cons ci ratio: 1.215952e-03	ci left: 7.837221e-01	ci right 7.846760e-01	k: 2242810	n:2860000
KS ci ratio: 1.183852e-01	ci left: 3.605269e-04	ci right 4.062289e-04	k: 1095	n:2860000
DDX24   2860000 perm   3651 sec   (783 perm/sec)   p_kst 3.828671e-04   p_cons 7.841993e-01   p_joint 2.765734e-04

Joint ci ratio: 1.390963e-01	ci left: 2.574101e-04	ci right 2.962231e-04	k: 793	n:2870000
Cons ci ratio: 1.213968e-03	ci left: 7.836849e-01	ci right 7.846372e-01	k: 2250543	n:2870000
KS ci ratio: 1.182774e-01	ci left: 3.599469e-04	ci right 4.055310e-04	k: 1097	n:2870000
DDX24   2870000 perm   3675 sec   (781 perm/sec)   p_kst 3.822300e-04   p_cons 7.841613e-01   p_joint 2.763066e-04

Joint ci ratio: 1.386604e-01	ci left: 2.581921e-04	ci right 2.969910e-04	k: 798	n:2880000
Cons ci ratio: 1.211820e-03	ci left: 7.836963e-01	ci right 7.846469e-01	k: 2258415	n:2880000
KS ci ratio: 1.179021e-01	ci left: 3.610559e-04	ci right 4.066252e-04	k: 1104	n:2880000
DDX24   2880000 perm   3701 sec   (778 perm/sec)   p_kst 3.833333e-04   p_cons 7.841719e-01   p_joint 2.770833e-04

Joint ci ratio: 1.386604e-01	ci left: 2.572987e-04	ci right 2.959633e-04	k: 798	n:2890000
Cons ci ratio: 1.209734e-03	ci left: 7.836937e-01	ci right 7.846427e-01	k: 2266247	n:2890000
KS ci ratio: 1.177956e-01	ci left: 3.604782e-04	ci right 4.059306e-04	k: 1106	n:2890000
DDX24   2890000 perm   3724 sec   (776 perm/sec)   p_kst 3.826990e-04   p_cons 7.841685e-01   p_joint 2.761246e-04

Joint ci ratio: 1.385738e-01	ci left: 2.567443e-04	ci right 2.952995e-04	k: 799	n:2900000
Cons ci ratio: 1.207629e-03	ci left: 7.836995e-01	ci right 7.846468e-01	k: 2274103	n:2900000
KS ci ratio: 1.176893e-01	ci left: 3.599045e-04	ci right 4.052408e-04	k: 1108	n:2900000
DDX24   2900000 perm   3749 sec   (774 perm/sec)   p_kst 3.820690e-04   p_cons 7.841734e-01   p_joint 2.755172e-04

Joint ci ratio: 1.381427e-01	ci left: 2.575208e-04	ci right 2.960624e-04	k: 804	n:2910000
Cons ci ratio: 1.205552e-03	ci left: 7.837004e-01	ci right 7.846461e-01	k: 2281945	n:2910000
KS ci ratio: 1.172671e-01	ci left: 3.613361e-04	ci right 4.066781e-04	k: 1116	n:2910000
DDX24   2910000 perm   3774 sec   (771 perm/sec)   p_kst 3.835052e-04   p_cons 7.841735e-01   p_joint 2.762887e-04

Joint ci ratio: 1.378860e-01	ci left: 2.576308e-04	ci right 2.961113e-04	k: 807	n:2920000
Cons ci ratio: 1.203535e-03	ci left: 7.836873e-01	ci right 7.846314e-01	k: 2289746	n:2920000
KS ci ratio: 1.171099e-01	ci left: 3.610959e-04	ci right 4.063429e-04	k: 1119	n:2920000
DDX24   2920000 perm   3798 sec   (769 perm/sec)   p_kst 3.832192e-04   p_cons 7.841596e-01   p_joint 2.763699e-04

Joint ci ratio: 1.377157e-01	ci left: 2.574106e-04	ci right 2.958068e-04	k: 809	n:2930000
Cons ci ratio: 1.201472e-03	ci left: 7.836903e-01	ci right 7.846327e-01	k: 2297594	n:2930000
KS ci ratio: 1.170055e-01	ci left: 3.605261e-04	ci right 4.056586e-04	k: 1121	n:2930000
DDX24   2930000 perm   3822 sec   (767 perm/sec)   p_kst 3.825939e-04   p_cons 7.841618e-01   p_joint 2.761092e-04

Joint ci ratio: 1.375460e-01	ci left: 2.571919e-04	ci right 2.955044e-04	k: 811	n:2940000
Cons ci ratio: 1.199413e-03	ci left: 7.836949e-01	ci right 7.846358e-01	k: 2305447	n:2940000
KS ci ratio: 1.167457e-01	ci left: 3.609508e-04	ci right 4.060292e-04	k: 1126	n:2940000
DDX24   2940000 perm   3847 sec   (764 perm/sec)   p_kst 3.829932e-04   p_cons 7.841656e-01   p_joint 2.758503e-04

Joint ci ratio: 1.374614e-01	ci left: 2.566473e-04	ci right 2.948533e-04	k: 812	n:2950000
Cons ci ratio: 1.197396e-03	ci left: 7.836908e-01	ci right 7.846300e-01	k: 2313274	n:2950000
KS ci ratio: 1.166423e-01	ci left: 3.603854e-04	ci right 4.053506e-04	k: 1128	n:2950000
DDX24   2950000 perm   3871 sec   (762 perm/sec)   p_kst 3.823729e-04   p_cons 7.841607e-01   p_joint 2.752542e-04

Joint ci ratio: 1.372927e-01	ci left: 2.564327e-04	ci right 2.945561e-04	k: 814	n:2960000
Cons ci ratio: 1.195315e-03	ci left: 7.837076e-01	ci right 7.846452e-01	k: 2321163	n:2960000
KS ci ratio: 1.165391e-01	ci left: 3.598238e-04	ci right 4.046765e-04	k: 1130	n:2960000
DDX24   2960000 perm   3896 sec   (760 perm/sec)   p_kst 3.817568e-04   p_cons 7.841767e-01   p_joint 2.750000e-04

Joint ci ratio: 1.370407e-01	ci left: 2.565448e-04	ci right 2.946090e-04	k: 817	n:2970000
Cons ci ratio: 1.193339e-03	ci left: 7.836977e-01	ci right 7.846338e-01	k: 2328973	n:2970000
KS ci ratio: 1.163849e-01	ci left: 3.595930e-04	ci right 4.043535e-04	k: 1133	n:2970000
DDX24   2970000 perm   3920 sec   (758 perm/sec)   p_kst 3.814815e-04   p_cons 7.841660e-01   p_joint 2.750842e-04

Joint ci ratio: 1.369570e-01	ci left: 2.560079e-04	ci right 2.939675e-04	k: 818	n:2980000
Cons ci ratio: 1.191336e-03	ci left: 7.836982e-01	ci right 7.846328e-01	k: 2336814	n:2980000
KS ci ratio: 1.162824e-01	ci left: 3.590379e-04	ci right 4.036873e-04	k: 1135	n:2980000
DDX24   2980000 perm   3944 sec   (756 perm/sec)   p_kst 3.808725e-04   p_cons 7.841658e-01   p_joint 2.744966e-04

Joint ci ratio: 1.363754e-01	ci left: 2.574128e-04	ci right 2.954054e-04	k: 825	n:2990000
Cons ci ratio: 1.189303e-03	ci left: 7.837102e-01	ci right 7.846431e-01	k: 2344689	n:2990000
KS ci ratio: 1.159257e-01	ci left: 3.601103e-04	ci right 4.047462e-04	k: 1142	n:2990000
DDX24   2990000 perm   3969 sec   (753 perm/sec)   p_kst 3.819398e-04   p_cons 7.841769e-01   p_joint 2.759197e-04

Joint ci ratio: 1.361284e-01	ci left: 2.575207e-04	ci right 2.954548e-04	k: 828	n:3000000
Cons ci ratio: 1.187274e-03	ci left: 7.837237e-01	ci right 7.846551e-01	k: 2352569	n:3000000
KS ci ratio: 1.156730e-01	ci left: 3.605283e-04	ci right 4.051120e-04	k: 1147	n:3000000
DDX24   3000000 perm   3994 sec   (751 perm/sec)   p_kst 3.823333e-04   p_cons 7.841897e-01   p_joint 2.760000e-04

Joint ci ratio: 1.357197e-01	ci left: 2.582698e-04	ci right 2.961908e-04	k: 833	n:3010000
Cons ci ratio: 1.185270e-03	ci left: 7.837332e-01	ci right 7.846630e-01	k: 2360437	n:3010000
KS ci ratio: 1.153219e-01	ci left: 3.615889e-04	ci right 4.061588e-04	k: 1154	n:3010000
DDX24   3010000 perm   4019 sec   (749 perm/sec)   p_kst 3.833887e-04   p_cons 7.841983e-01   p_joint 2.767442e-04

Joint ci ratio: 1.353953e-01	ci left: 2.586942e-04	ci right 2.965794e-04	k: 837	n:3020000
Cons ci ratio: 1.183272e-03	ci left: 7.837436e-01	ci right 7.846718e-01	k: 2368308	n:3020000
KS ci ratio: 1.149739e-01	ci left: 3.626428e-04	ci right 4.071985e-04	k: 1161	n:3020000
DDX24   3020000 perm   4044 sec   (747 perm/sec)   p_kst 3.844371e-04   p_cons 7.842079e-01   p_joint 2.771523e-04

Joint ci ratio: 1.312320e-01	ci left: 2.750681e-04	ci right 3.140161e-04	k: 891	n:3030000
Cons ci ratio: 1.181303e-03	ci left: 7.837486e-01	ci right 7.846753e-01	k: 2376163	n:3030000
KS ci ratio: 1.146291e-01	ci left: 3.636898e-04	ci right 4.082312e-04	k: 1168	n:3030000
DDX24   3030000 perm   4069 sec   (745 perm/sec)   p_kst 3.854785e-04   p_cons 7.842122e-01   p_joint 2.940594e-04

Joint ci ratio: 1.311585e-01	ci left: 2.744814e-04	ci right 3.133229e-04	k: 892	n:3040000
Cons ci ratio: 1.179368e-03	ci left: 7.837467e-01	ci right 7.846719e-01	k: 2383997	n:3040000
KS ci ratio: 1.145802e-01	ci left: 3.628130e-04	ci right 4.072267e-04	k: 1169	n:3040000
DDX24   3040000 perm   4094 sec   (743 perm/sec)   p_kst 3.845395e-04   p_cons 7.842095e-01   p_joint 2.934211e-04

Joint ci ratio: 1.307200e-01	ci left: 2.754843e-04	ci right 3.143272e-04	k: 898	n:3050000
Cons ci ratio: 1.177431e-03	ci left: 7.837481e-01	ci right 7.846717e-01	k: 2391841	n:3050000
KS ci ratio: 1.142389e-01	ci left: 3.638529e-04	ci right 4.082522e-04	k: 1176	n:3050000
DDX24   3050000 perm   4119 sec   (741 perm/sec)   p_kst 3.855738e-04   p_cons 7.842102e-01   p_joint 2.944262e-04

Joint ci ratio: 1.303580e-01	ci left: 2.761646e-04	ci right 3.149873e-04	k: 903	n:3060000
Cons ci ratio: 1.175498e-03	ci left: 7.837511e-01	ci right 7.846732e-01	k: 2399690	n:3060000
KS ci ratio: 1.139488e-01	ci left: 3.645686e-04	ci right 4.089348e-04	k: 1182	n:3060000
DDX24   3060000 perm   4144 sec   (738 perm/sec)   p_kst 3.862745e-04   p_cons 7.842124e-01   p_joint 2.950980e-04

Joint ci ratio: 1.302860e-01	ci left: 2.755802e-04	ci right 3.142977e-04	k: 904	n:3070000
Cons ci ratio: 1.173599e-03	ci left: 7.837469e-01	ci right 7.846676e-01	k: 2407517	n:3070000
KS ci ratio: 1.138526e-01	ci left: 3.640140e-04	ci right 4.082728e-04	k: 1184	n:3070000
DDX24   3070000 perm   4168 sec   (737 perm/sec)   p_kst 3.856678e-04   p_cons 7.842075e-01   p_joint 2.944625e-04

Joint ci ratio: 1.298562e-01	ci left: 2.765701e-04	ci right 3.152886e-04	k: 910	n:3080000
Cons ci ratio: 1.171684e-03	ci left: 7.837499e-01	ci right 7.846690e-01	k: 2415366	n:3080000
KS ci ratio: 1.134702e-01	ci left: 3.653557e-04	ci right 4.096184e-04	k: 1192	n:3080000
DDX24   3080000 perm   4193 sec   (735 perm/sec)   p_kst 3.870130e-04   p_cons 7.842097e-01   p_joint 2.954545e-04

Joint ci ratio: 1.297139e-01	ci left: 2.763013e-04	ci right 3.149365e-04	k: 912	n:3090000
Cons ci ratio: 1.169760e-03	ci left: 7.837584e-01	ci right 7.846760e-01	k: 2423232	n:3090000
KS ci ratio: 1.133752e-01	ci left: 3.648022e-04	ci right 4.089584e-04	k: 1194	n:3090000
DDX24   3090000 perm   4217 sec   (733 perm/sec)   p_kst 3.864078e-04   p_cons 7.842175e-01   p_joint 2.951456e-04

Joint ci ratio: 1.295721e-01	ci left: 2.760343e-04	ci right 3.145867e-04	k: 914	n:3100000
Cons ci ratio: 1.167789e-03	ci left: 7.837830e-01	ci right 7.846991e-01	k: 2431148	n:3100000
KS ci ratio: 1.131859e-01	ci left: 3.648792e-04	ci right 4.089660e-04	k: 1198	n:3100000
DDX24   3100000 perm   4243 sec   (731 perm/sec)   p_kst 3.864516e-04   p_cons 7.842413e-01   p_joint 2.948387e-04

Joint ci ratio: 1.294307e-01	ci left: 2.757689e-04	ci right 3.142390e-04	k: 916	n:3110000
Cons ci ratio: 1.165985e-03	ci left: 7.837620e-01	ci right 7.846767e-01	k: 2438923	n:3110000
KS ci ratio: 1.130917e-01	ci left: 3.643308e-04	ci right 4.083123e-04	k: 1200	n:3110000
DDX24   3110000 perm   4268 sec   (729 perm/sec)   p_kst 3.858521e-04   p_cons 7.842196e-01   p_joint 2.945338e-04

Joint ci ratio: 1.293602e-01	ci left: 2.751952e-04	ci right 3.135628e-04	k: 917	n:3120000
Cons ci ratio: 1.164144e-03	ci left: 7.837543e-01	ci right 7.846676e-01	k: 2446739	n:3120000
KS ci ratio: 1.129977e-01	ci left: 3.637860e-04	ci right 4.076628e-04	k: 1202	n:3120000
DDX24   3120000 perm   4293 sec   (727 perm/sec)   p_kst 3.852564e-04   p_cons 7.842112e-01   p_joint 2.939103e-04

Joint ci ratio: 1.293603e-01	ci left: 2.743160e-04	ci right 3.125610e-04	k: 917	n:3130000
Cons ci ratio: 1.162338e-03	ci left: 7.837390e-01	ci right 7.846508e-01	k: 2454531	n:3130000
KS ci ratio: 1.129039e-01	ci left: 3.632447e-04	ci right 4.070174e-04	k: 1204	n:3130000
DDX24   3130000 perm   4319 sec   (725 perm/sec)   p_kst 3.846645e-04   p_cons 7.841952e-01   p_joint 2.929712e-04

Joint ci ratio: 1.291494e-01	ci left: 2.743669e-04	ci right 3.125518e-04	k: 920	n:3140000
Cons ci ratio: 1.160526e-03	ci left: 7.837280e-01	ci right 7.846384e-01	k: 2462336	n:3140000
KS ci ratio: 1.127169e-01	ci left: 3.633258e-04	ci right 4.070309e-04	k: 1208	n:3140000
DDX24   3140000 perm   4344 sec   (723 perm/sec)   p_kst 3.847134e-04   p_cons 7.841834e-01   p_joint 2.929936e-04

Joint ci ratio: 1.290794e-01	ci left: 2.738031e-04	ci right 3.118873e-04	k: 921	n:3150000
Cons ci ratio: 1.158663e-03	ci left: 7.837345e-01	ci right 7.846434e-01	k: 2470196	n:3150000
KS ci ratio: 1.126704e-01	ci left: 3.624809e-04	ci right 4.060652e-04	k: 1209	n:3150000
DDX24   3150000 perm   4370 sec   (721 perm/sec)   p_kst 3.838095e-04   p_cons 7.841892e-01   p_joint 2.923810e-04

Joint ci ratio: 1.288699e-01	ci left: 2.738553e-04	ci right 3.118803e-04	k: 924	n:3160000
Cons ci ratio: 1.156738e-03	ci left: 7.837615e-01	ci right 7.846690e-01	k: 2478121	n:3160000
KS ci ratio: 1.124383e-01	ci left: 3.628715e-04	ci right 4.064070e-04	k: 1214	n:3160000
DDX24   3160000 perm   4395 sec   (719 perm/sec)   p_kst 3.841772e-04   p_cons 7.842155e-01   p_joint 2.924051e-04

Joint ci ratio: 1.285922e-01	ci left: 2.742126e-04	ci right 3.121989e-04	k: 928	n:3170000
Cons ci ratio: 1.154906e-03	ci left: 7.837641e-01	ci right 7.846701e-01	k: 2485969	n:3170000
KS ci ratio: 1.122077e-01	ci left: 3.632598e-04	ci right 4.067465e-04	k: 1219	n:3170000
DDX24   3170000 perm   4420 sec   (717 perm/sec)   p_kst 3.845426e-04   p_cons 7.842174e-01   p_joint 2.927445e-04

Joint ci ratio: 1.283850e-01	ci left: 2.742634e-04	ci right 3.121909e-04	k: 931	n:3180000
Cons ci ratio: 1.153153e-03	ci left: 7.837459e-01	ci right 7.846505e-01	k: 2493751	n:3180000
KS ci ratio: 1.120700e-01	ci left: 3.630344e-04	ci right 4.064373e-04	k: 1222	n:3180000
DDX24   3180000 perm   4446 sec   (715 perm/sec)   p_kst 3.842767e-04   p_cons 7.841984e-01   p_joint 2.927673e-04

Joint ci ratio: 1.318256e-01	ci left: 2.588461e-04	ci right 2.956760e-04	k: 883	n:3190000
Cons ci ratio: 1.151331e-03	ci left: 7.837503e-01	ci right 7.846535e-01	k: 2501605	n:3190000
KS ci ratio: 1.118871e-01	ci left: 3.631152e-04	ci right 4.064522e-04	k: 1226	n:3190000
DDX24   3190000 perm   4472 sec   (713 perm/sec)   p_kst 3.843260e-04   p_cons 7.842022e-01   p_joint 2.768025e-04

Joint ci ratio: 1.318256e-01	ci left: 2.580372e-04	ci right 2.947520e-04	k: 883	n:3200000
Cons ci ratio: 1.149538e-03	ci left: 7.837489e-01	ci right 7.846506e-01	k: 2509440	n:3200000
KS ci ratio: 1.118416e-01	ci left: 3.622842e-04	ci right 4.055033e-04	k: 1227	n:3200000
DDX24   3200000 perm   4497 sec   (712 perm/sec)   p_kst 3.834375e-04   p_cons 7.842000e-01   p_joint 2.759375e-04

Joint ci ratio: 1.316768e-01	ci left: 2.578359e-04	ci right 2.944773e-04	k: 885	n:3210000
Cons ci ratio: 1.147779e-03	ci left: 7.837399e-01	ci right 7.846403e-01	k: 2517251	n:3210000
KS ci ratio: 1.116599e-01	ci left: 3.623668e-04	ci right 4.055210e-04	k: 1231	n:3210000
DDX24   3210000 perm   4523 sec   (710 perm/sec)   p_kst 3.834891e-04   p_cons 7.841903e-01   p_joint 2.757009e-04

Joint ci ratio: 1.313068e-01	ci left: 2.585369e-04	ci right 2.951666e-04	k: 890	n:3220000
Cons ci ratio: 1.145970e-03	ci left: 7.837481e-01	ci right 7.846471e-01	k: 2525117	n:3220000
KS ci ratio: 1.114340e-01	ci left: 3.627510e-04	ci right 4.058577e-04	k: 1236	n:3220000
DDX24   3220000 perm   4549 sec   (708 perm/sec)   p_kst 3.838509e-04   p_cons 7.841978e-01   p_joint 2.763975e-04

Joint ci ratio: 1.312332e-01	ci left: 2.580359e-04	ci right 2.945726e-04	k: 891	n:3230000
Cons ci ratio: 1.144152e-03	ci left: 7.837615e-01	ci right 7.846590e-01	k: 2533000	n:3230000
KS ci ratio: 1.113890e-01	ci left: 3.619289e-04	ci right 4.049194e-04	k: 1237	n:3230000
DDX24   3230000 perm   4575 sec   (706 perm/sec)   p_kst 3.829721e-04   p_cons 7.842105e-01   p_joint 2.758514e-04

Joint ci ratio: 1.309399e-01	ci left: 2.584336e-04	ci right 2.949384e-04	k: 895	n:3240000
Cons ci ratio: 1.142311e-03	ci left: 7.837841e-01	ci right 7.846802e-01	k: 2540913	n:3240000
KS ci ratio: 1.111648e-01	ci left: 3.623121e-04	ci right 4.052558e-04	k: 1242	n:3240000
DDX24   3240000 perm   4602 sec   (704 perm/sec)   p_kst 3.833333e-04   p_cons 7.842324e-01   p_joint 2.762346e-04

Joint ci ratio: 1.309399e-01	ci left: 2.576384e-04	ci right 2.940309e-04	k: 895	n:3250000
Cons ci ratio: 1.140516e-03	ci left: 7.837955e-01	ci right 7.846902e-01	k: 2548790	n:3250000
KS ci ratio: 1.111201e-01	ci left: 3.614964e-04	ci right 4.043251e-04	k: 1243	n:3250000
DDX24   3250000 perm   4629 sec   (702 perm/sec)   p_kst 3.824615e-04   p_cons 7.842431e-01   p_joint 2.753846e-04

Joint ci ratio: 1.305761e-01	ci left: 2.583317e-04	ci right 2.947129e-04	k: 900	n:3260000
Cons ci ratio: 1.138785e-03	ci left: 7.837905e-01	ci right 7.846839e-01	k: 2556614	n:3260000
KS ci ratio: 1.108975e-01	ci left: 3.618787e-04	ci right 4.046611e-04	k: 1248	n:3260000
DDX24   3260000 perm   4656 sec   (700 perm/sec)   p_kst 3.828221e-04   p_cons 7.842374e-01   p_joint 2.760736e-04

Joint ci ratio: 1.301434e-01	ci left: 2.593167e-04	ci right 2.957063e-04	k: 906	n:3270000
Cons ci ratio: 1.137064e-03	ci left: 7.837846e-01	ci right 7.846766e-01	k: 2564435	n:3270000
KS ci ratio: 1.105439e-01	ci left: 3.631507e-04	ci right 4.059378e-04	k: 1256	n:3270000
DDX24   3270000 perm   4682 sec   (698 perm/sec)   p_kst 3.840979e-04   p_cons 7.842309e-01   p_joint 2.770642e-04

Joint ci ratio: 1.300002e-01	ci left: 2.591160e-04	ci right 2.954343e-04	k: 908	n:3280000
Cons ci ratio: 1.135325e-03	ci left: 7.837864e-01	ci right 7.846771e-01	k: 2572281	n:3280000
KS ci ratio: 1.104123e-01	ci left: 3.629329e-04	ci right 4.056401e-04	k: 1259	n:3280000
DDX24   3280000 perm   4710 sec   (696 perm/sec)   p_kst 3.838415e-04   p_cons 7.842320e-01   p_joint 2.768293e-04

Joint ci ratio: 1.298574e-01	ci left: 2.589166e-04	ci right 2.951640e-04	k: 910	n:3290000
Cons ci ratio: 1.133608e-03	ci left: 7.837843e-01	ci right 7.846736e-01	k: 2580114	n:3290000
KS ci ratio: 1.102811e-01	ci left: 3.627165e-04	ci right 4.053442e-04	k: 1262	n:3290000
DDX24   3290000 perm   4736 sec   (695 perm/sec)   p_kst 3.835866e-04   p_cons 7.842292e-01   p_joint 2.765957e-04

Joint ci ratio: 1.297151e-01	ci left: 2.587184e-04	ci right 2.948953e-04	k: 912	n:3300000
Cons ci ratio: 1.131865e-03	ci left: 7.837921e-01	ci right 7.846801e-01	k: 2587980	n:3300000
KS ci ratio: 1.101503e-01	ci left: 3.625014e-04	ci right 4.050500e-04	k: 1265	n:3300000
DDX24   3300000 perm   4763 sec   (693 perm/sec)   p_kst 3.833333e-04   p_cons 7.842364e-01   p_joint 2.763636e-04

Joint ci ratio: 1.296442e-01	ci left: 2.582290e-04	ci right 2.943163e-04	k: 913	n:3310000
Cons ci ratio: 1.130138e-03	ci left: 7.837975e-01	ci right 7.846841e-01	k: 2595838	n:3310000
KS ci ratio: 1.100635e-01	ci left: 3.619938e-04	ci right 4.044472e-04	k: 1267	n:3310000
DDX24   3310000 perm   4789 sec   (691 perm/sec)   p_kst 3.827795e-04   p_cons 7.842411e-01   p_joint 2.758308e-04

Joint ci ratio: 1.296442e-01	ci left: 2.574512e-04	ci right 2.934298e-04	k: 913	n:3320000
Cons ci ratio: 1.128366e-03	ci left: 7.838189e-01	ci right 7.847041e-01	k: 2603749	n:3320000
KS ci ratio: 1.099335e-01	ci left: 3.617822e-04	ci right 4.041574e-04	k: 1270	n:3320000
DDX24   3320000 perm   4817 sec   (689 perm/sec)   p_kst 3.825301e-04   p_cons 7.842617e-01   p_joint 2.750000e-04

Joint ci ratio: 1.295026e-01	ci left: 2.572592e-04	ci right 2.931687e-04	k: 915	n:3330000
Cons ci ratio: 1.126638e-03	ci left: 7.838293e-01	ci right 7.847132e-01	k: 2611624	n:3330000
KS ci ratio: 1.098040e-01	ci left: 3.615719e-04	ci right 4.038694e-04	k: 1273	n:3330000
DDX24   3330000 perm   4844 sec   (688 perm/sec)   p_kst 3.822823e-04   p_cons 7.842715e-01   p_joint 2.747748e-04

Joint ci ratio: 1.293615e-01	ci left: 2.570684e-04	ci right 2.929091e-04	k: 917	n:3340000
Cons ci ratio: 1.125018e-03	ci left: 7.838097e-01	ci right 7.846922e-01	k: 2619399	n:3340000
KS ci ratio: 1.096320e-01	ci left: 3.616541e-04	ci right 4.038906e-04	k: 1277	n:3340000
DDX24   3340000 perm   4872 sec   (686 perm/sec)   p_kst 3.823353e-04   p_cons 7.842512e-01   p_joint 2.745509e-04

Joint ci ratio: 1.290805e-01	ci left: 2.574565e-04	ci right 2.932674e-04	k: 921	n:3350000
Cons ci ratio: 1.123336e-03	ci left: 7.838108e-01	ci right 7.846920e-01	k: 2627243	n:3350000
KS ci ratio: 1.093330e-01	ci left: 3.626069e-04	ci right 4.048317e-04	k: 1284	n:3350000
DDX24   3350000 perm   4900 sec   (684 perm/sec)   p_kst 3.832836e-04   p_cons 7.842516e-01   p_joint 2.749254e-04

Joint ci ratio: 1.288014e-01	ci left: 2.578423e-04	ci right 2.936234e-04	k: 925	n:3360000
Cons ci ratio: 1.121658e-03	ci left: 7.838131e-01	ci right 7.846930e-01	k: 2635091	n:3360000
KS ci ratio: 1.091209e-01	ci left: 3.629751e-04	ci right 4.051556e-04	k: 1289	n:3360000
DDX24   3360000 perm   4929 sec   (682 perm/sec)   p_kst 3.836310e-04   p_cons 7.842533e-01   p_joint 2.752976e-04

Joint ci ratio: 1.251377e-01	ci left: 2.728796e-04	ci right 3.095904e-04	k: 980	n:3370000
Cons ci ratio: 1.120014e-03	ci left: 7.838073e-01	ci right 7.846860e-01	k: 2642912	n:3370000
KS ci ratio: 1.089942e-01	ci left: 3.627640e-04	ci right 4.048678e-04	k: 1292	n:3370000
DDX24   3370000 perm   4956 sec   (680 perm/sec)   p_kst 3.833828e-04   p_cons 7.842469e-01   p_joint 2.908012e-04

Joint ci ratio: 1.251378e-01	ci left: 2.720722e-04	ci right 3.086745e-04	k: 980	n:3380000
Cons ci ratio: 1.118399e-03	ci left: 7.837948e-01	ci right 7.846722e-01	k: 2650710	n:3380000
KS ci ratio: 1.089943e-01	ci left: 3.616907e-04	ci right 4.036700e-04	k: 1292	n:3380000
DDX24   3380000 perm   4984 sec   (678 perm/sec)   p_kst 3.822485e-04   p_cons 7.842337e-01   p_joint 2.899408e-04

Joint ci ratio: 1.248834e-01	ci left: 2.724127e-04	ci right 3.089807e-04	k: 984	n:3390000
Cons ci ratio: 1.116739e-03	ci left: 7.837983e-01	ci right 7.846744e-01	k: 2658562	n:3390000
KS ci ratio: 1.088261e-01	ci left: 3.617716e-04	ci right 4.036913e-04	k: 1296	n:3390000
DDX24   3390000 perm   5012 sec   (676 perm/sec)   p_kst 3.823009e-04   p_cons 7.842366e-01   p_joint 2.902655e-04

Joint ci ratio: 1.247568e-01	ci left: 2.721813e-04	ci right 3.086786e-04	k: 986	n:3400000
Cons ci ratio: 1.115108e-03	ci left: 7.837950e-01	ci right 7.846698e-01	k: 2666391	n:3400000
KS ci ratio: 1.087004e-01	ci left: 3.615659e-04	ci right 4.034104e-04	k: 1299	n:3400000
DDX24   3400000 perm   5040 sec   (675 perm/sec)   p_kst 3.820588e-04   p_cons 7.842326e-01   p_joint 2.900000e-04

Joint ci ratio: 1.245677e-01	ci left: 2.722355e-04	ci right 3.086805e-04	k: 989	n:3410000
Cons ci ratio: 1.113484e-03	ci left: 7.837920e-01	ci right 7.846655e-01	k: 2674221	n:3410000
KS ci ratio: 1.085752e-01	ci left: 3.613614e-04	ci right 4.031310e-04	k: 1302	n:3410000
DDX24   3410000 perm   5067 sec   (673 perm/sec)   p_kst 3.818182e-04   p_cons 7.842290e-01   p_joint 2.900293e-04

Joint ci ratio: 1.243168e-01	ci left: 2.725727e-04	ci right 3.089839e-04	k: 993	n:3420000
Cons ci ratio: 1.111802e-03	ci left: 7.838087e-01	ci right 7.846809e-01	k: 2682118	n:3420000
KS ci ratio: 1.083675e-01	ci left: 3.617271e-04	ci right 4.034539e-04	k: 1307	n:3420000
DDX24   3420000 perm   5095 sec   (671 perm/sec)   p_kst 3.821637e-04   p_cons 7.842450e-01   p_joint 2.903509e-04

Joint ci ratio: 1.274326e-01	ci left: 2.582243e-04	ci right 2.936487e-04	k: 945	n:3430000
Cons ci ratio: 1.110254e-03	ci left: 7.837867e-01	ci right 7.846577e-01	k: 2689883	n:3430000
KS ci ratio: 1.081198e-01	ci left: 3.623745e-04	ci right 4.040742e-04	k: 1313	n:3430000
DDX24   3430000 perm   5122 sec   (670 perm/sec)   p_kst 3.827988e-04   p_cons 7.842224e-01   p_joint 2.755102e-04

Joint ci ratio: 1.271640e-01	ci left: 2.585994e-04	ci right 2.939949e-04	k: 949	n:3440000
Cons ci ratio: 1.108683e-03	ci left: 7.837742e-01	ci right 7.846439e-01	k: 2697680	n:3440000
KS ci ratio: 1.078737e-01	ci left: 3.630181e-04	ci right 4.046909e-04	k: 1319	n:3440000
DDX24   3440000 perm   5150 sec   (668 perm/sec)   p_kst 3.834302e-04   p_cons 7.842093e-01   p_joint 2.758721e-04

Joint ci ratio: 1.270972e-01	ci left: 2.581305e-04	ci right 2.934418e-04	k: 950	n:3450000
Cons ci ratio: 1.107114e-03	ci left: 7.837629e-01	ci right 7.846314e-01	k: 2705481	n:3450000
KS ci ratio: 1.077514e-01	ci left: 3.628120e-04	ci right 4.044109e-04	k: 1322	n:3450000
DDX24   3450000 perm   5177 sec   (666 perm/sec)   p_kst 3.831884e-04   p_cons 7.841974e-01   p_joint 2.753623e-04

Joint ci ratio: 1.268972e-01	ci left: 2.582239e-04	ci right 2.934883e-04	k: 953	n:3460000
Cons ci ratio: 1.105510e-03	ci left: 7.837644e-01	ci right 7.846316e-01	k: 2713326	n:3460000
KS ci ratio: 1.075888e-01	ci left: 3.628884e-04	ci right 4.044292e-04	k: 1326	n:3460000
DDX24   3460000 perm   5206 sec   (665 perm/sec)   p_kst 3.832370e-04   p_cons 7.841983e-01   p_joint 2.754335e-04

Joint ci ratio: 1.266319e-01	ci left: 2.585959e-04	ci right 2.938318e-04	k: 957	n:3470000
Cons ci ratio: 1.103851e-03	ci left: 7.837850e-01	ci right 7.846509e-01	k: 2721237	n:3470000
KS ci ratio: 1.074271e-01	ci left: 3.629643e-04	ci right 4.044474e-04	k: 1330	n:3470000
DDX24   3470000 perm   5235 sec   (663 perm/sec)   p_kst 3.832853e-04   p_cons 7.842182e-01   p_joint 2.757925e-04

Joint ci ratio: 1.264341e-01	ci left: 2.586876e-04	ci right 2.938768e-04	k: 960	n:3480000
Cons ci ratio: 1.102224e-03	ci left: 7.837979e-01	ci right 7.846626e-01	k: 2729122	n:3480000
KS ci ratio: 1.072660e-01	ci left: 3.630399e-04	ci right 4.044655e-04	k: 1334	n:3480000
DDX24   3480000 perm   5264 sec   (661 perm/sec)   p_kst 3.833333e-04   p_cons 7.842305e-01   p_joint 2.758621e-04

Joint ci ratio: 1.262372e-01	ci left: 2.587788e-04	ci right 2.939215e-04	k: 963	n:3490000
Cons ci ratio: 1.100560e-03	ci left: 7.838242e-01	ci right 7.846876e-01	k: 2737054	n:3490000
KS ci ratio: 1.071057e-01	ci left: 3.631151e-04	ci right 4.044834e-04	k: 1338	n:3490000
DDX24   3490000 perm   5292 sec   (659 perm/sec)   p_kst 3.833811e-04   p_cons 7.842562e-01   p_joint 2.759312e-04

Joint ci ratio: 1.258462e-01	ci left: 2.596997e-04	ci right 2.948500e-04	k: 969	n:3500000
Cons ci ratio: 1.098996e-03	ci left: 7.838218e-01	ci right 7.846840e-01	k: 2744886	n:3500000
KS ci ratio: 1.068267e-01	ci left: 3.640241e-04	ci right 4.053812e-04	k: 1345	n:3500000
DDX24   3500000 perm   5320 sec   (658 perm/sec)   p_kst 3.842857e-04   p_cons 7.842531e-01   p_joint 2.768571e-04

Joint ci ratio: 1.255230e-01	ci left: 2.603396e-04	ci right 2.954792e-04	k: 974	n:3510000
Cons ci ratio: 1.097429e-03	ci left: 7.838226e-01	ci right 7.846835e-01	k: 2752729	n:3510000
KS ci ratio: 1.065500e-01	ci left: 3.649281e-04	ci right 4.062738e-04	k: 1352	n:3510000
DDX24   3510000 perm   5349 sec   (656 perm/sec)   p_kst 3.851852e-04   p_cons 7.842533e-01   p_joint 2.774929e-04

Joint ci ratio: 1.253303e-01	ci left: 2.604255e-04	ci right 2.955188e-04	k: 977	n:3520000
Cons ci ratio: 1.095905e-03	ci left: 7.838120e-01	ci right 7.846717e-01	k: 2760532	n:3520000
KS ci ratio: 1.063928e-01	ci left: 3.649975e-04	ci right 4.062862e-04	k: 1356	n:3520000
DDX24   3520000 perm   5377 sec   (655 perm/sec)   p_kst 3.852273e-04   p_cons 7.842420e-01   p_joint 2.775568e-04

Joint ci ratio: 1.250112e-01	ci left: 2.610598e-04	ci right 2.961424e-04	k: 982	n:3530000
Cons ci ratio: 1.094374e-03	ci left: 7.838056e-01	ci right 7.846642e-01	k: 2768350	n:3530000
KS ci ratio: 1.060805e-01	ci left: 3.661696e-04	ci right 4.074617e-04	k: 1364	n:3530000
DDX24   3530000 perm   5405 sec   (653 perm/sec)   p_kst 3.864023e-04   p_cons 7.842351e-01   p_joint 2.781870e-04

Joint ci ratio: 1.249476e-01	ci left: 2.605960e-04	ci right 2.955971e-04	k: 983	n:3540000
Cons ci ratio: 1.092828e-03	ci left: 7.838061e-01	ci right 7.846634e-01	k: 2776192	n:3540000
KS ci ratio: 1.060029e-01	ci left: 3.656852e-04	ci right 4.068907e-04	k: 1366	n:3540000
DDX24   3540000 perm   5434 sec   (651 perm/sec)   p_kst 3.858757e-04   p_cons 7.842350e-01   p_joint 2.776836e-04

Joint ci ratio: 1.246944e-01	ci left: 2.609535e-04	ci right 2.959264e-04	k: 987	n:3550000
Cons ci ratio: 1.091311e-03	ci left: 7.837996e-01	ci right 7.846557e-01	k: 2784009	n:3550000
KS ci ratio: 1.058096e-01	ci left: 3.660262e-04	ci right 4.071902e-04	k: 1371	n:3550000
DDX24   3550000 perm   5463 sec   (650 perm/sec)   p_kst 3.861972e-04   p_cons 7.842279e-01   p_joint 2.780282e-04

Joint ci ratio: 1.244428e-01	ci left: 2.613091e-04	ci right 2.962537e-04	k: 991	n:3560000
Cons ci ratio: 1.089759e-03	ci left: 7.838058e-01	ci right 7.846606e-01	k: 2791871	n:3560000
KS ci ratio: 1.056557e-01	ci left: 3.660919e-04	ci right 4.071997e-04	k: 1375	n:3560000
DDX24   3560000 perm   5492 sec   (648 perm/sec)   p_kst 3.862360e-04   p_cons 7.842334e-01   p_joint 2.783708e-04

Joint ci ratio: 1.241926e-01	ci left: 2.616627e-04	ci right 2.965792e-04	k: 995	n:3570000
Cons ci ratio: 1.088231e-03	ci left: 7.838065e-01	ci right 7.846602e-01	k: 2799714	n:3570000
KS ci ratio: 1.053879e-01	ci left: 3.669755e-04	ci right 4.080716e-04	k: 1382	n:3570000
DDX24   3570000 perm   5520 sec   (647 perm/sec)   p_kst 3.871148e-04   p_cons 7.842336e-01   p_joint 2.787115e-04

Joint ci ratio: 1.238820e-01	ci left: 2.622852e-04	ci right 2.971907e-04	k: 1000	n:3580000
Cons ci ratio: 1.086771e-03	ci left: 7.837883e-01	ci right 7.846408e-01	k: 2807489	n:3580000
KS ci ratio: 1.051222e-01	ci left: 3.678543e-04	ci right 4.089385e-04	k: 1389	n:3580000
DDX24   3580000 perm   5549 sec   (645 perm/sec)   p_kst 3.879888e-04   p_cons 7.842148e-01   p_joint 2.793296e-04

Joint ci ratio: 1.237585e-01	ci left: 2.620944e-04	ci right 2.969372e-04	k: 1002	n:3590000
Cons ci ratio: 1.085263e-03	ci left: 7.837866e-01	ci right 7.846380e-01	k: 2815323	n:3590000
KS ci ratio: 1.050466e-01	ci left: 3.673721e-04	ci right 4.083712e-04	k: 1391	n:3590000
DDX24   3590000 perm   5578 sec   (644 perm/sec)   p_kst 3.874652e-04   p_cons 7.842125e-01   p_joint 2.791086e-04

Joint ci ratio: 1.235738e-01	ci left: 2.621739e-04	ci right 2.969715e-04	k: 1005	n:3600000
Cons ci ratio: 1.083698e-03	ci left: 7.838050e-01	ci right 7.846551e-01	k: 2823229	n:3600000
KS ci ratio: 1.049336e-01	ci left: 3.671630e-04	ci right 4.080920e-04	k: 1394	n:3600000
DDX24   3600000 perm   5607 sec   (642 perm/sec)   p_kst 3.872222e-04   p_cons 7.842303e-01   p_joint 2.791667e-04

Joint ci ratio: 1.233288e-01	ci left: 2.625215e-04	ci right 2.972911e-04	k: 1009	n:3610000
Cons ci ratio: 1.082172e-03	ci left: 7.838130e-01	ci right 7.846619e-01	k: 2831098	n:3610000
KS ci ratio: 1.047461e-01	ci left: 3.674947e-04	ci right 4.083829e-04	k: 1399	n:3610000
DDX24   3610000 perm   5636 sec   (641 perm/sec)   p_kst 3.875346e-04   p_cons 7.842377e-01   p_joint 2.795014e-04

Joint ci ratio: 1.232678e-01	ci left: 2.620640e-04	ci right 2.967546e-04	k: 1010	n:3620000
Cons ci ratio: 1.080703e-03	ci left: 7.838052e-01	ci right 7.846529e-01	k: 2838910	n:3620000
KS ci ratio: 1.045595e-01	ci left: 3.678246e-04	ci right 4.086721e-04	k: 1404	n:3620000
DDX24   3620000 perm   5665 sec   (639 perm/sec)   p_kst 3.878453e-04   p_cons 7.842293e-01   p_joint 2.790055e-04

Joint ci ratio: 1.232069e-01	ci left: 2.616091e-04	ci right 2.962211e-04	k: 1011	n:3630000
Cons ci ratio: 1.079213e-03	ci left: 7.838059e-01	ci right 7.846526e-01	k: 2846753	n:3630000
KS ci ratio: 1.043369e-01	ci left: 3.684210e-04	ci right 4.092424e-04	k: 1410	n:3630000
DDX24   3630000 perm   5694 sec   (637 perm/sec)   p_kst 3.884298e-04   p_cons 7.842295e-01   p_joint 2.785124e-04

Joint ci ratio: 1.229642e-01	ci left: 2.619554e-04	ci right 2.965400e-04	k: 1015	n:3640000
Cons ci ratio: 1.077767e-03	ci left: 7.837949e-01	ci right 7.846404e-01	k: 2854553	n:3640000
KS ci ratio: 1.040790e-01	ci left: 3.692818e-04	ci right 4.100912e-04	k: 1417	n:3640000
DDX24   3640000 perm   5724 sec   (636 perm/sec)   p_kst 3.892857e-04   p_cons 7.842179e-01   p_joint 2.788462e-04

Joint ci ratio: 1.227830e-01	ci left: 2.620344e-04	ci right 2.965747e-04	k: 1018	n:3650000
Cons ci ratio: 1.076261e-03	ci left: 7.838045e-01	ci right 7.846488e-01	k: 2862428	n:3650000
KS ci ratio: 1.038960e-01	ci left: 3.696043e-04	ci right 4.103732e-04	k: 1422	n:3650000
DDX24   3650000 perm   5754 sec   (634 perm/sec)   p_kst 3.895890e-04   p_cons 7.842268e-01   p_joint 2.789041e-04

Joint ci ratio: 1.227831e-01	ci left: 2.613185e-04	ci right 2.957644e-04	k: 1018	n:3660000
Cons ci ratio: 1.074734e-03	ci left: 7.838225e-01	ci right 7.846656e-01	k: 2870334	n:3660000
KS ci ratio: 1.038961e-01	ci left: 3.685945e-04	ci right 4.092519e-04	k: 1422	n:3660000
DDX24   3660000 perm   5784 sec   (633 perm/sec)   p_kst 3.885246e-04   p_cons 7.842443e-01   p_joint 2.781421e-04

Joint ci ratio: 1.224231e-01	ci left: 2.621912e-04	ci right 2.966435e-04	k: 1024	n:3670000
Cons ci ratio: 1.073239e-03	ci left: 7.838325e-01	ci right 7.846744e-01	k: 2878211	n:3670000
KS ci ratio: 1.035328e-01	ci left: 3.702443e-04	ci right 4.109322e-04	k: 1432	n:3670000
DDX24   3670000 perm   5814 sec   (631 perm/sec)   p_kst 3.901907e-04   p_cons 7.842537e-01   p_joint 2.790191e-04

Joint ci ratio: 1.223635e-01	ci left: 2.617421e-04	ci right 2.961174e-04	k: 1025	n:3680000
Cons ci ratio: 1.071762e-03	ci left: 7.838386e-01	ci right 7.846794e-01	k: 2886074	n:3680000
KS ci ratio: 1.034246e-01	ci left: 3.700323e-04	ci right 4.106519e-04	k: 1435	n:3680000
DDX24   3680000 perm   5843 sec   (630 perm/sec)   p_kst 3.899457e-04   p_cons 7.842592e-01   p_joint 2.785326e-04

Joint ci ratio: 1.223039e-01	ci left: 2.612955e-04	ci right 2.955943e-04	k: 1026	n:3690000
Cons ci ratio: 1.070322e-03	ci left: 7.838352e-01	ci right 7.846749e-01	k: 2893902	n:3690000
KS ci ratio: 1.033527e-01	ci left: 3.695575e-04	ci right 4.100950e-04	k: 1437	n:3690000
DDX24   3690000 perm   5873 sec   (628 perm/sec)   p_kst 3.894309e-04   p_cons 7.842553e-01   p_joint 2.780488e-04

Joint ci ratio: 1.220072e-01	ci left: 2.618993e-04	ci right 2.961880e-04	k: 1031	n:3700000
Cons ci ratio: 1.068839e-03	ci left: 7.838470e-01	ci right 7.846855e-01	k: 2901786	n:3700000
KS ci ratio: 1.031735e-01	ci left: 3.698751e-04	ci right 4.103729e-04	k: 1442	n:3700000
DDX24   3700000 perm   5903 sec   (627 perm/sec)   p_kst 3.897297e-04   p_cons 7.842665e-01   p_joint 2.786486e-04

Joint ci ratio: 1.218892e-01	ci left: 2.617161e-04	ci right 2.959451e-04	k: 1033	n:3710000
Cons ci ratio: 1.067344e-03	ci left: 7.838644e-01	ci right 7.847017e-01	k: 2909691	n:3710000
KS ci ratio: 1.030308e-01	ci left: 3.699285e-04	ci right 4.103727e-04	k: 1446	n:3710000
DDX24   3710000 perm   5933 sec   (625 perm/sec)   p_kst 3.897574e-04   p_cons 7.842833e-01   p_joint 2.784367e-04

Joint ci ratio: 1.217715e-01	ci left: 2.615338e-04	ci right 2.957036e-04	k: 1035	n:3720000
Cons ci ratio: 1.065887e-03	ci left: 7.838717e-01	ci right 7.847079e-01	k: 2917559	n:3720000
KS ci ratio: 1.028887e-01	ci left: 3.699817e-04	ci right 4.103725e-04	k: 1450	n:3720000
DDX24   3720000 perm   5963 sec   (624 perm/sec)   p_kst 3.897849e-04   p_cons 7.842901e-01   p_joint 2.782258e-04

Joint ci ratio: 1.217128e-01	ci left: 2.610925e-04	ci right 2.951871e-04	k: 1036	n:3730000
Cons ci ratio: 1.064422e-03	ci left: 7.838836e-01	ci right 7.847187e-01	k: 2925444	n:3730000
KS ci ratio: 1.028533e-01	ci left: 3.692510e-04	ci right 4.095473e-04	k: 1451	n:3730000
DDX24   3730000 perm   5993 sec   (622 perm/sec)   p_kst 3.890080e-04   p_cons 7.843013e-01   p_joint 2.777480e-04

Joint ci ratio: 1.215371e-01	ci left: 2.611722e-04	ci right 2.952244e-04	k: 1039	n:3740000
Cons ci ratio: 1.063014e-03	ci left: 7.838791e-01	ci right 7.847130e-01	k: 2933268	n:3740000
KS ci ratio: 1.027119e-01	ci left: 3.693057e-04	ci right 4.095493e-04	k: 1455	n:3740000
DDX24   3740000 perm   6023 sec   (621 perm/sec)   p_kst 3.890374e-04   p_cons 7.842963e-01   p_joint 2.778075e-04

Joint ci ratio: 1.214204e-01	ci left: 2.609928e-04	ci right 2.949866e-04	k: 1041	n:3750000
Cons ci ratio: 1.061596e-03	ci left: 7.838796e-01	ci right 7.847125e-01	k: 2941111	n:3750000
KS ci ratio: 1.026063e-01	ci left: 3.691003e-04	ci right 4.092777e-04	k: 1458	n:3750000
DDX24   3750000 perm   6053 sec   (619 perm/sec)   p_kst 3.888000e-04   p_cons 7.842963e-01   p_joint 2.776000e-04

Joint ci ratio: 1.213622e-01	ci left: 2.605566e-04	ci right 2.944761e-04	k: 1042	n:3760000
Cons ci ratio: 1.060197e-03	ci left: 7.838757e-01	ci right 7.847074e-01	k: 2948937	n:3760000
KS ci ratio: 1.025009e-01	ci left: 3.688961e-04	ci right 4.090075e-04	k: 1461	n:3760000
DDX24   3760000 perm   6083 sec   (618 perm/sec)   p_kst 3.885638e-04   p_cons 7.842918e-01   p_joint 2.771277e-04

Joint ci ratio: 1.211302e-01	ci left: 2.608943e-04	ci right 2.947882e-04	k: 1046	n:3770000
Cons ci ratio: 1.058769e-03	ci left: 7.838831e-01	ci right 7.847138e-01	k: 2956806	n:3770000
KS ci ratio: 1.022564e-01	ci left: 3.697268e-04	ci right 4.098269e-04	k: 1468	n:3770000
DDX24   3770000 perm   6113 sec   (617 perm/sec)   p_kst 3.893899e-04   p_cons 7.842987e-01   p_joint 2.774536e-04

Joint ci ratio: 1.209570e-01	ci left: 2.609737e-04	ci right 2.948260e-04	k: 1049	n:3780000
Cons ci ratio: 1.057378e-03	ci left: 7.838802e-01	ci right 7.847098e-01	k: 2964636	n:3780000
KS ci ratio: 1.021175e-01	ci left: 3.697799e-04	ci right 4.098279e-04	k: 1472	n:3780000
DDX24   3780000 perm   6145 sec   (615 perm/sec)   p_kst 3.894180e-04   p_cons 7.842952e-01   p_joint 2.775132e-04

Joint ci ratio: 1.208995e-01	ci left: 2.605410e-04	ci right 2.943199e-04	k: 1050	n:3790000
Cons ci ratio: 1.056008e-03	ci left: 7.838724e-01	ci right 7.847008e-01	k: 2972447	n:3790000
KS ci ratio: 1.020136e-01	ci left: 3.695755e-04	ci right 4.095584e-04	k: 1475	n:3790000
DDX24   3790000 perm   6175 sec   (614 perm/sec)   p_kst 3.891821e-04   p_cons 7.842868e-01   p_joint 2.770449e-04

Joint ci ratio: 1.207273e-01	ci left: 2.606210e-04	ci right 2.943587e-04	k: 1053	n:3800000
Cons ci ratio: 1.054625e-03	ci left: 7.838706e-01	ci right 7.846979e-01	k: 2980281	n:3800000
KS ci ratio: 1.018069e-01	ci left: 3.701417e-04	ci right 4.100997e-04	k: 1481	n:3800000
DDX24   3800000 perm   6206 sec   (612 perm/sec)   p_kst 3.897368e-04   p_cons 7.842845e-01   p_joint 2.771053e-04

Joint ci ratio: 1.204988e-01	ci left: 2.609551e-04	ci right 2.946676e-04	k: 1057	n:3810000
Cons ci ratio: 1.053167e-03	ci left: 7.838948e-01	ci right 7.847210e-01	k: 2988214	n:3810000
KS ci ratio: 1.016698e-01	ci left: 3.701933e-04	ci right 4.100999e-04	k: 1485	n:3810000
DDX24   3810000 perm   6237 sec   (611 perm/sec)   p_kst 3.897638e-04   p_cons 7.843081e-01   p_joint 2.774278e-04

Joint ci ratio: 1.203851e-01	ci left: 2.607798e-04	ci right 2.944356e-04	k: 1059	n:3820000
Cons ci ratio: 1.051743e-03	ci left: 7.839095e-01	ci right 7.847346e-01	k: 2996111	n:3820000
KS ci ratio: 1.016015e-01	ci left: 3.697345e-04	ci right 4.095632e-04	k: 1487	n:3820000
DDX24   3820000 perm   6267 sec   (610 perm/sec)   p_kst 3.892670e-04   p_cons 7.843223e-01   p_joint 2.772251e-04

Joint ci ratio: 1.202151e-01	ci left: 2.608586e-04	ci right 2.944737e-04	k: 1062	n:3830000
Cons ci ratio: 1.050342e-03	ci left: 7.839188e-01	ci right 7.847429e-01	k: 3003988	n:3830000
KS ci ratio: 1.014652e-01	ci left: 3.697870e-04	ci right 4.095648e-04	k: 1491	n:3830000
DDX24   3830000 perm   6298 sec   (608 perm/sec)   p_kst 3.892950e-04   p_cons 7.843311e-01   p_joint 2.772846e-04

Joint ci ratio: 1.200458e-01	ci left: 2.609371e-04	ci right 2.945115e-04	k: 1065	n:3840000
Cons ci ratio: 1.048960e-03	ci left: 7.839237e-01	ci right 7.847467e-01	k: 3011848	n:3840000
KS ci ratio: 1.013633e-01	ci left: 3.695854e-04	ci right 4.092993e-04	k: 1494	n:3840000
DDX24   3840000 perm   6329 sec   (607 perm/sec)   p_kst 3.890625e-04   p_cons 7.843354e-01   p_joint 2.773437e-04

Joint ci ratio: 1.199334e-01	ci left: 2.607632e-04	ci right 2.942816e-04	k: 1067	n:3850000
Cons ci ratio: 1.047619e-03	ci left: 7.839171e-01	ci right 7.847391e-01	k: 3019664	n:3850000
KS ci ratio: 1.012956e-01	ci left: 3.691318e-04	ci right 4.087688e-04	k: 1496	n:3850000
DDX24   3850000 perm   6361 sec   (605 perm/sec)   p_kst 3.885714e-04   p_cons 7.843283e-01   p_joint 2.771429e-04

Joint ci ratio: 1.197094e-01	ci left: 2.610929e-04	ci right 2.945866e-04	k: 1071	n:3860000
Cons ci ratio: 1.046268e-03	ci left: 7.839155e-01	ci right 7.847364e-01	k: 3027499	n:3860000
KS ci ratio: 1.011269e-01	ci left: 3.694380e-04	ci right 4.090379e-04	k: 1501	n:3860000
DDX24   3860000 perm   6393 sec   (604 perm/sec)   p_kst 3.888601e-04   p_cons 7.843262e-01   p_joint 2.774611e-04

Joint ci ratio: 1.196536e-01	ci left: 2.606689e-04	ci right 2.940915e-04	k: 1072	n:3870000
Cons ci ratio: 1.044917e-03	ci left: 7.839155e-01	ci right 7.847353e-01	k: 3035340	n:3870000
KS ci ratio: 1.010933e-01	ci left: 3.687353e-04	ci right 4.082459e-04	k: 1502	n:3870000
DDX24   3870000 perm   6425 sec   (602 perm/sec)   p_kst 3.881137e-04   p_cons 7.843256e-01   p_joint 2.770026e-04

Joint ci ratio: 1.193758e-01	ci left: 2.612472e-04	ci right 2.946607e-04	k: 1077	n:3880000
Cons ci ratio: 1.043566e-03	ci left: 7.839170e-01	ci right 7.847357e-01	k: 3043187	n:3880000
KS ci ratio: 1.009255e-01	ci left: 3.690410e-04	ci right 4.085149e-04	k: 1507	n:3880000
DDX24   3880000 perm   6456 sec   (601 perm/sec)   p_kst 3.884021e-04   p_cons 7.843265e-01   p_joint 2.775773e-04

Joint ci ratio: 1.189900e-01	ci left: 2.623214e-04	ci right 2.957563e-04	k: 1084	n:3890000
Cons ci ratio: 1.042198e-03	ci left: 7.839262e-01	ci right 7.847438e-01	k: 3051064	n:3890000
KS ci ratio: 1.006920e-01	ci left: 3.698465e-04	ci right 4.093096e-04	k: 1514	n:3890000
DDX24   3890000 perm   6488 sec   (600 perm/sec)   p_kst 3.892031e-04   p_cons 7.843352e-01   p_joint 2.786632e-04

Joint ci ratio: 1.188259e-01	ci left: 2.623952e-04	ci right 2.957900e-04	k: 1087	n:3900000
Cons ci ratio: 1.040886e-03	ci left: 7.839184e-01	ci right 7.847350e-01	k: 3058875	n:3900000
KS ci ratio: 1.005925e-01	ci left: 3.696480e-04	ci right 4.090487e-04	k: 1517	n:3900000
DDX24   3900000 perm   6521 sec   (598 perm/sec)   p_kst 3.889744e-04   p_cons 7.843269e-01   p_joint 2.787179e-04

Joint ci ratio: 1.187713e-01	ci left: 2.619722e-04	ci right 2.952969e-04	k: 1088	n:3910000
Cons ci ratio: 1.039600e-03	ci left: 7.839040e-01	ci right 7.847196e-01	k: 3066660	n:3910000
KS ci ratio: 1.005594e-01	ci left: 3.689519e-04	ci right 4.082647e-04	k: 1518	n:3910000
DDX24   3910000 perm   6553 sec   (597 perm/sec)   p_kst 3.882353e-04   p_cons 7.843120e-01   p_joint 2.782609e-04

Joint ci ratio: 1.187714e-01	ci left: 2.613039e-04	ci right 2.945436e-04	k: 1088	n:3920000
Cons ci ratio: 1.038269e-03	ci left: 7.839058e-01	ci right 7.847203e-01	k: 3074508	n:3920000
KS ci ratio: 1.005595e-01	ci left: 3.680107e-04	ci right 4.072232e-04	k: 1518	n:3920000
DDX24   3920000 perm   6585 sec   (595 perm/sec)   p_kst 3.872449e-04   p_cons 7.843133e-01   p_joint 2.775510e-04

Joint ci ratio: 1.187169e-01	ci left: 2.608859e-04	ci right 2.940561e-04	k: 1089	n:3930000
Cons ci ratio: 1.036926e-03	ci left: 7.839134e-01	ci right 7.847269e-01	k: 3082379	n:3930000
KS ci ratio: 1.005264e-01	ci left: 3.673224e-04	ci right 4.064479e-04	k: 1519	n:3930000
DDX24   3930000 perm   6616 sec   (594 perm/sec)   p_kst 3.865140e-04   p_cons 7.843204e-01   p_joint 2.770992e-04

Joint ci ratio: 1.184996e-01	ci left: 2.612089e-04	ci right 2.943551e-04	k: 1093	n:3940000
Cons ci ratio: 1.035640e-03	ci left: 7.839037e-01	ci right 7.847162e-01	k: 3090182	n:3940000
KS ci ratio: 1.003615e-01	ci left: 3.676272e-04	ci right 4.067172e-04	k: 1524	n:3940000
DDX24   3940000 perm   6648 sec   (593 perm/sec)   p_kst 3.868020e-04   p_cons 7.843102e-01   p_joint 2.774112e-04

Joint ci ratio: 1.182836e-01	ci left: 2.615303e-04	ci right 2.946526e-04	k: 1097	n:3950000
Cons ci ratio: 1.034279e-03	ci left: 7.839204e-01	ci right 7.847318e-01	k: 3098089	n:3950000
KS ci ratio: 1.001319e-01	ci left: 3.684243e-04	ci right 4.075041e-04	k: 1531	n:3950000
DDX24   3950000 perm   6680 sec   (591 perm/sec)   p_kst 3.875949e-04   p_cons 7.843263e-01   p_joint 2.777215e-04

Joint ci ratio: 1.181760e-01	ci left: 2.613600e-04	ci right 2.944285e-04	k: 1099	n:3960000
Cons ci ratio: 1.032965e-03	ci left: 7.839234e-01	ci right 7.847338e-01	k: 3105942	n:3960000
KS ci ratio: 1.000666e-01	ci left: 3.679863e-04	ci right 4.069927e-04	k: 1533	n:3960000
DDX24   3960000 perm   6712 sec   (590 perm/sec)   p_kst 3.871212e-04   p_cons 7.843288e-01   p_joint 2.775253e-04

Joint ci ratio: 1.181224e-01	ci left: 2.609461e-04	ci right 2.939462e-04	k: 1100	n:3970000
Cons ci ratio: 1.031645e-03	ci left: 7.839299e-01	ci right 7.847392e-01	k: 3113809	n:3970000
KS ci ratio: 1.000340e-01	ci left: 3.673050e-04	ci right 4.062258e-04	k: 1534	n:3970000
DDX24   3970000 perm   6744 sec   (589 perm/sec)   p_kst 3.863980e-04   p_cons 7.843348e-01   p_joint 2.770781e-04

Joint ci ratio: 1.180688e-01	ci left: 2.605342e-04	ci right 2.934663e-04	k: 1101	n:3980000
Cons ci ratio: 1.030317e-03	ci left: 7.839406e-01	ci right 7.847489e-01	k: 3121693	n:3980000
KS ci ratio: 1.000015e-01	ci left: 3.666270e-04	ci right 4.054626e-04	k: 1535	n:3980000
DDX24   3980000 perm   6776 sec   (587 perm/sec)   p_kst 3.856784e-04   p_cons 7.843450e-01   p_joint 2.766332e-04

Joint ci ratio: 1.179618e-01	ci left: 2.603677e-04	ci right 2.932468e-04	k: 1103	n:3990000
Cons ci ratio: 1.029039e-03	ci left: 7.839365e-01	ci right 7.847438e-01	k: 3129518	n:3990000
KS ci ratio: 9.987156e-02	ci left: 3.666856e-04	ci right 4.054740e-04	k: 1539	n:3990000
DDX24   3990000 perm   6808 sec   (586 perm/sec)   p_kst 3.857143e-04   p_cons 7.843404e-01   p_joint 2.764411e-04

Joint ci ratio: 1.178551e-01	ci left: 2.602021e-04	ci right 2.930284e-04	k: 1105	n:4000000
Cons ci ratio: 1.027701e-03	ci left: 7.839536e-01	ci right 7.847600e-01	k: 3137428	n:4000000
KS ci ratio: 9.974211e-02	ci left: 3.667440e-04	ci right 4.054853e-04	k: 1543	n:4000000
DDX24   4000000 perm   6839 sec   (585 perm/sec)   p_kst 3.857500e-04   p_cons 7.843570e-01   p_joint 2.762500e-04

Joint ci ratio: 1.175896e-01	ci left: 2.607634e-04	ci right 2.935813e-04	k: 1110	n:4010000
Cons ci ratio: 1.026416e-03	ci left: 7.839550e-01	ci right 7.847603e-01	k: 3145275	n:4010000
KS ci ratio: 9.951673e-02	ci left: 3.675315e-04	ci right 4.062632e-04	k: 1550	n:4010000
DDX24   4010000 perm   6872 sec   (584 perm/sec)   p_kst 3.865337e-04   p_cons 7.843579e-01   p_joint 2.768080e-04

Joint ci ratio: 1.174839e-01	ci left: 2.605976e-04	ci right 2.933631e-04	k: 1112	n:4020000
Cons ci ratio: 1.025145e-03	ci left: 7.839536e-01	ci right 7.847579e-01	k: 3153111	n:4020000
KS ci ratio: 9.938865e-02	ci left: 3.675876e-04	ci right 4.062724e-04	k: 1554	n:4020000
DDX24   4020000 perm   6905 sec   (582 perm/sec)   p_kst 3.865672e-04   p_cons 7.843560e-01   p_joint 2.766169e-04

Joint ci ratio: 1.171684e-01	ci left: 2.613961e-04	ci right 2.941677e-04	k: 1118	n:4030000
Cons ci ratio: 1.023863e-03	ci left: 7.839569e-01	ci right 7.847603e-01	k: 3160966	n:4030000
KS ci ratio: 9.910221e-02	ci left: 3.688533e-04	ci right 4.075529e-04	k: 1563	n:4030000
DDX24   4030000 perm   6938 sec   (581 perm/sec)   p_kst 3.878412e-04   p_cons 7.843588e-01   p_joint 2.774194e-04

Joint ci ratio: 1.168555e-01	ci left: 2.621907e-04	ci right 2.949681e-04	k: 1124	n:4040000
Cons ci ratio: 1.022612e-03	ci left: 7.839519e-01	ci right 7.847542e-01	k: 3168787	n:4040000
KS ci ratio: 9.891264e-02	ci left: 3.693886e-04	ci right 4.080660e-04	k: 1569	n:4040000
DDX24   4040000 perm   6970 sec   (580 perm/sec)   p_kst 3.883663e-04   p_cons 7.843532e-01   p_joint 2.782178e-04

Joint ci ratio: 1.167000e-01	ci left: 2.622625e-04	ci right 2.950022e-04	k: 1127	n:4050000
Cons ci ratio: 1.021370e-03	ci left: 7.839455e-01	ci right 7.847469e-01	k: 3176603	n:4050000
KS ci ratio: 9.875550e-02	ci left: 3.696806e-04	ci right 4.083235e-04	k: 1574	n:4050000
DDX24   4050000 perm   7003 sec   (578 perm/sec)   p_kst 3.886420e-04   p_cons 7.843464e-01   p_joint 2.782716e-04

Joint ci ratio: 1.164936e-01	ci left: 2.625730e-04	ci right 2.952895e-04	k: 1131	n:4060000
Cons ci ratio: 1.020102e-03	ci left: 7.839491e-01	ci right 7.847495e-01	k: 3184459	n:4060000
KS ci ratio: 9.863033e-02	ci left: 3.697310e-04	ci right 4.083273e-04	k: 1578	n:4060000
DDX24   4060000 perm   7036 sec   (577 perm/sec)   p_kst 3.886700e-04   p_cons 7.843495e-01   p_joint 2.785714e-04

Joint ci ratio: 1.164423e-01	ci left: 2.621664e-04	ci right 2.948168e-04	k: 1132	n:4070000
Cons ci ratio: 1.018819e-03	ci left: 7.839593e-01	ci right 7.847587e-01	k: 3192342	n:4070000
KS ci ratio: 9.856795e-02	ci left: 3.693018e-04	ci right 4.078276e-04	k: 1580	n:4070000
DDX24   4070000 perm   7069 sec   (576 perm/sec)   p_kst 3.882064e-04   p_cons 7.843592e-01   p_joint 2.781327e-04

Joint ci ratio: 1.164423e-01	ci left: 2.615238e-04	ci right 2.940942e-04	k: 1132	n:4080000
Cons ci ratio: 1.017576e-03	ci left: 7.839577e-01	ci right 7.847561e-01	k: 3200177	n:4080000
KS ci ratio: 9.856799e-02	ci left: 3.683967e-04	ci right 4.068280e-04	k: 1580	n:4080000
DDX24   4080000 perm   7102 sec   (574 perm/sec)   p_kst 3.872549e-04   p_cons 7.843571e-01   p_joint 2.774510e-04

Joint ci ratio: 1.163397e-01	ci left: 2.613592e-04	ci right 2.938784e-04	k: 1134	n:4090000
Cons ci ratio: 1.016341e-03	ci left: 7.839549e-01	ci right 7.847523e-01	k: 3208007	n:4090000
KS ci ratio: 9.850573e-02	ci left: 3.679729e-04	ci right 4.063344e-04	k: 1582	n:4090000
DDX24   4090000 perm   7135 sec   (573 perm/sec)   p_kst 3.867971e-04   p_cons 7.843538e-01   p_joint 2.772616e-04

Joint ci ratio: 1.162373e-01	ci left: 2.611953e-04	ci right 2.936636e-04	k: 1136	n:4100000
Cons ci ratio: 1.015049e-03	ci left: 7.839726e-01	ci right 7.847690e-01	k: 3215921	n:4100000
KS ci ratio: 9.844358e-02	ci left: 3.675512e-04	ci right 4.058431e-04	k: 1584	n:4100000
DDX24   4100000 perm   7168 sec   (572 perm/sec)   p_kst 3.863415e-04   p_cons 7.843710e-01   p_joint 2.770732e-04

Joint ci ratio: 1.161863e-01	ci left: 2.607960e-04	ci right 2.931995e-04	k: 1137	n:4110000
Cons ci ratio: 1.013834e-03	ci left: 7.839663e-01	ci right 7.847618e-01	k: 3223737	n:4110000
KS ci ratio: 9.828866e-02	ci left: 3.678435e-04	ci right 4.061021e-04	k: 1589	n:4110000
DDX24   4110000 perm   7201 sec   (571 perm/sec)   p_kst 3.866180e-04   p_cons 7.843642e-01   p_joint 2.766423e-04

Joint ci ratio: 1.159318e-01	ci left: 2.613414e-04	ci right 2.937367e-04	k: 1142	n:4120000
Cons ci ratio: 1.012625e-03	ci left: 7.839594e-01	ci right 7.847538e-01	k: 3231550	n:4120000
KS ci ratio: 9.813447e-02	ci left: 3.681345e-04	ci right 4.063598e-04	k: 1594	n:4120000
DDX24   4120000 perm   7234 sec   (570 perm/sec)   p_kst 3.868932e-04   p_cons 7.843568e-01   p_joint 2.771845e-04

Joint ci ratio: 1.158812e-01	ci left: 2.609437e-04	ci right 2.932746e-04	k: 1143	n:4130000
Cons ci ratio: 1.011401e-03	ci left: 7.839590e-01	ci right 7.847525e-01	k: 3239390	n:4130000
KS ci ratio: 9.807303e-02	ci left: 3.677155e-04	ci right 4.058720e-04	k: 1596	n:4130000
DDX24   4130000 perm   7268 sec   (568 perm/sec)   p_kst 3.864407e-04   p_cons 7.843559e-01   p_joint 2.767554e-04

Joint ci ratio: 1.157800e-01	ci left: 2.607825e-04	ci right 2.930633e-04	k: 1145	n:4140000
Cons ci ratio: 1.010154e-03	ci left: 7.839678e-01	ci right 7.847603e-01	k: 3247268	n:4140000
KS ci ratio: 9.795043e-02	ci left: 3.677698e-04	ci right 4.058815e-04	k: 1600	n:4140000
DDX24   4140000 perm   7301 sec   (567 perm/sec)   p_kst 3.864734e-04   p_cons 7.843643e-01   p_joint 2.765700e-04

Joint ci ratio: 1.155785e-01	ci left: 2.610901e-04	ci right 2.933488e-04	k: 1149	n:4150000
Cons ci ratio: 1.008992e-03	ci left: 7.839495e-01	ci right 7.847412e-01	k: 3255034	n:4150000
KS ci ratio: 9.779782e-02	ci left: 3.680589e-04	ci right 4.061378e-04	k: 1605	n:4150000
DDX24   4150000 perm   7334 sec   (566 perm/sec)   p_kst 3.867470e-04   p_cons 7.843455e-01   p_joint 2.768675e-04

Joint ci ratio: 1.154781e-01	ci left: 2.609293e-04	ci right 2.931383e-04	k: 1151	n:4160000
Cons ci ratio: 1.007797e-03	ci left: 7.839436e-01	ci right 7.847343e-01	k: 3262851	n:4160000
KS ci ratio: 9.773701e-02	ci left: 3.676432e-04	ci right 4.056540e-04	k: 1607	n:4160000
DDX24   4160000 perm   7367 sec   (565 perm/sec)   p_kst 3.862981e-04   p_cons 7.843392e-01   p_joint 2.766827e-04

Joint ci ratio: 1.154280e-01	ci left: 2.605365e-04	ci right 2.926821e-04	k: 1152	n:4170000
Cons ci ratio: 1.006625e-03	ci left: 7.839318e-01	ci right 7.847215e-01	k: 3270643	n:4170000
KS ci ratio: 9.770667e-02	ci left: 3.669955e-04	ci right 4.049269e-04	k: 1608	n:4170000
DDX24   4170000 perm   7401 sec   (563 perm/sec)   p_kst 3.856115e-04   p_cons 7.843269e-01   p_joint 2.762590e-04

Joint ci ratio: 1.153780e-01	ci left: 2.601455e-04	ci right 2.922280e-04	k: 1153	n:4180000
Cons ci ratio: 1.005382e-03	ci left: 7.839449e-01	ci right 7.847337e-01	k: 3278539	n:4180000
KS ci ratio: 9.764602e-02	ci left: 3.665843e-04	ci right 4.044484e-04	k: 1610	n:4180000
DDX24   4180000 perm   7434 sec   (562 perm/sec)   p_kst 3.851675e-04   p_cons 7.843395e-01   p_joint 2.758373e-04

Joint ci ratio: 1.150792e-01	ci left: 2.609154e-04	ci right 2.930038e-04	k: 1159	n:4190000
Cons ci ratio: 1.004256e-03	ci left: 7.839204e-01	ci right 7.847083e-01	k: 3286278	n:4190000
KS ci ratio: 9.743453e-02	ci left: 3.673393e-04	ci right 4.051945e-04	k: 1617	n:4190000
DDX24   4190000 perm   7467 sec   (561 perm/sec)   p_kst 3.859189e-04   p_cons 7.843146e-01   p_joint 2.766110e-04

Joint ci ratio: 1.149307e-01	ci left: 2.609879e-04	ci right 2.930410e-04	k: 1162	n:4200000
Cons ci ratio: 1.003084e-03	ci left: 7.839125e-01	ci right 7.846995e-01	k: 3294086	n:4200000
KS ci ratio: 9.725435e-02	ci left: 3.678585e-04	ci right 4.056930e-04	k: 1623	n:4200000
DDX24   4200000 perm   7501 sec   (560 perm/sec)   p_kst 3.864286e-04   p_cons 7.843062e-01   p_joint 2.766667e-04

Joint ci ratio: 1.148813e-01	ci left: 2.605987e-04	ci right 2.925893e-04	k: 1163	n:4210000
Cons ci ratio: 1.001912e-03	ci left: 7.839063e-01	ci right 7.846923e-01	k: 3301901	n:4210000
KS ci ratio: 9.719454e-02	ci left: 3.674482e-04	ci right 4.052160e-04	k: 1625	n:4210000
DDX24   4210000 perm   7534 sec   (559 perm/sec)   p_kst 3.859857e-04   p_cons 7.842995e-01   p_joint 2.762470e-04

Joint ci ratio: 1.146354e-01	ci left: 2.611320e-04	ci right 2.931148e-04	k: 1168	n:4220000
Cons ci ratio: 1.000689e-03	ci left: 7.839189e-01	ci right 7.847040e-01	k: 3309795	n:4220000
KS ci ratio: 9.701568e-02	ci left: 3.679647e-04	ci right 4.057121e-04	k: 1631	n:4220000
DDX24   4220000 perm   7568 sec   (558 perm/sec)   p_kst 3.864929e-04   p_cons 7.843116e-01   p_joint 2.767773e-04

Joint ci ratio: 1.145374e-01	ci left: 2.609739e-04	ci right 2.929082e-04	k: 1170	n:4230000
Cons ci ratio: 9.994932e-04	ci left: 7.839233e-01	ci right 7.847075e-01	k: 3317655	n:4230000
KS ci ratio: 9.695631e-02	ci left: 3.675562e-04	ci right 4.052373e-04	k: 1633	n:4230000
DDX24   4230000 perm   7602 sec   (556 perm/sec)   p_kst 3.860520e-04   p_cons 7.843156e-01   p_joint 2.765957e-04

Joint ci ratio: 1.144398e-01	ci left: 2.608166e-04	ci right 2.927026e-04	k: 1172	n:4240000
Cons ci ratio: 9.982903e-04	ci left: 7.839318e-01	ci right 7.847150e-01	k: 3325532	n:4240000
KS ci ratio: 9.683786e-02	ci left: 3.676098e-04	ci right 4.052478e-04	k: 1637	n:4240000
DDX24   4240000 perm   7636 sec   (555 perm/sec)   p_kst 3.860849e-04   p_cons 7.843236e-01   p_joint 2.764151e-04

Joint ci ratio: 1.142937e-01	ci left: 2.608886e-04	ci right 2.927399e-04	k: 1175	n:4250000
Cons ci ratio: 9.971299e-04	ci left: 7.839273e-01	ci right 7.847095e-01	k: 3333354	n:4250000
KS ci ratio: 9.674931e-02	ci left: 3.674337e-04	ci right 4.050172e-04	k: 1640	n:4250000
DDX24   4250000 perm   7671 sec   (554 perm/sec)   p_kst 3.858824e-04   p_cons 7.843186e-01   p_joint 2.764706e-04

Joint ci ratio: 1.141482e-01	ci left: 2.609603e-04	ci right 2.927771e-04	k: 1178	n:4260000
Cons ci ratio: 9.959721e-04	ci left: 7.839232e-01	ci right 7.847046e-01	k: 3341178	n:4260000
KS ci ratio: 9.666100e-02	ci left: 3.672583e-04	ci right 4.047877e-04	k: 1643	n:4260000
DDX24   4260000 perm   7706 sec   (553 perm/sec)   p_kst 3.856808e-04   p_cons 7.843141e-01   p_joint 2.765258e-04

Joint ci ratio: 1.140032e-01	ci left: 2.610316e-04	ci right 2.928140e-04	k: 1181	n:4270000
Cons ci ratio: 9.947970e-04	ci left: 7.839264e-01	ci right 7.847069e-01	k: 3349033	n:4270000
KS ci ratio: 9.657294e-02	ci left: 3.670838e-04	ci right 4.045593e-04	k: 1646	n:4270000
DDX24   4270000 perm   7741 sec   (552 perm/sec)   p_kst 3.854801e-04   p_cons 7.843169e-01   p_joint 2.765808e-04

Joint ci ratio: 1.139551e-01	ci left: 2.606487e-04	ci right 2.923702e-04	k: 1182	n:4280000
Cons ci ratio: 9.936322e-04	ci left: 7.839276e-01	ci right 7.847071e-01	k: 3356879	n:4280000
KS ci ratio: 9.654367e-02	ci left: 3.664542e-04	ci right 4.038533e-04	k: 1647	n:4280000
DDX24   4280000 perm   7776 sec   (550 perm/sec)   p_kst 3.848131e-04   p_cons 7.843175e-01   p_joint 2.761682e-04

Joint ci ratio: 1.139551e-01	ci left: 2.600412e-04	ci right 2.916887e-04	k: 1182	n:4290000
Cons ci ratio: 9.924968e-04	ci left: 7.839200e-01	ci right 7.846987e-01	k: 3364688	n:4290000
KS ci ratio: 9.651442e-02	ci left: 3.658274e-04	ci right 4.031507e-04	k: 1648	n:4290000
DDX24   4290000 perm   7811 sec   (549 perm/sec)   p_kst 3.841492e-04   p_cons 7.843096e-01   p_joint 2.755245e-04

Joint ci ratio: 1.137629e-01	ci left: 2.603402e-04	ci right 2.919671e-04	k: 1186	n:4300000
Cons ci ratio: 9.913585e-04	ci left: 7.839149e-01	ci right 7.846926e-01	k: 3372507	n:4300000
KS ci ratio: 9.636842e-02	ci left: 3.661114e-04	ci right 4.034039e-04	k: 1653	n:4300000
DDX24   4300000 perm   7846 sec   (548 perm/sec)   p_kst 3.844186e-04   p_cons 7.843040e-01   p_joint 2.758140e-04

Joint ci ratio: 1.136672e-01	ci left: 2.601870e-04	ci right 2.917669e-04	k: 1188	n:4310000
Cons ci ratio: 9.901637e-04	ci left: 7.839304e-01	ci right 7.847072e-01	k: 3380415	n:4310000
KS ci ratio: 9.628115e-02	ci left: 3.659413e-04	ci right 4.031808e-04	k: 1656	n:4310000
DDX24   4310000 perm   7881 sec   (547 perm/sec)   p_kst 3.842227e-04   p_cons 7.843190e-01   p_joint 2.756381e-04

Joint ci ratio: 1.135241e-01	ci left: 2.602594e-04	ci right 2.918056e-04	k: 1191	n:4320000
Cons ci ratio: 9.890340e-04	ci left: 7.839250e-01	ci right 7.847010e-01	k: 3388233	n:4320000
KS ci ratio: 9.616515e-02	ci left: 3.659978e-04	ci right 4.031957e-04	k: 1660	n:4320000
DDX24   4320000 perm   7915 sec   (546 perm/sec)   p_kst 3.842593e-04   p_cons 7.843132e-01   p_joint 2.756944e-04

Joint ci ratio: 1.184470e-01	ci left: 2.379059e-04	ci right 2.680808e-04	k: 1094	n:4330000
Cons ci ratio: 9.878745e-04	ci left: 7.839312e-01	ci right 7.847063e-01	k: 3396101	n:4330000
KS ci ratio: 9.604956e-02	ci left: 3.660541e-04	ci right 4.032105e-04	k: 1664	n:4330000
DDX24   4330000 perm   7950 sec   (545 perm/sec)   p_kst 3.842956e-04   p_cons 7.843189e-01   p_joint 2.526559e-04

Joint ci ratio: 1.184470e-01	ci left: 2.373577e-04	ci right 2.674631e-04	k: 1094	n:4340000
Cons ci ratio: 9.867547e-04	ci left: 7.839252e-01	ci right 7.846993e-01	k: 3403916	n:4340000
KS ci ratio: 9.599195e-02	ci left: 3.656605e-04	ci right 4.027534e-04	k: 1666	n:4340000
DDX24   4340000 perm   7984 sec   (544 perm/sec)   p_kst 3.838710e-04   p_cons 7.843124e-01   p_joint 2.520737e-04

Joint ci ratio: 1.183930e-01	ci left: 2.370352e-04	ci right 2.670849e-04	k: 1095	n:4350000
Cons ci ratio: 9.856267e-04	ci left: 7.839233e-01	ci right 7.846966e-01	k: 3411749	n:4350000
KS ci ratio: 9.593443e-02	ci left: 3.652686e-04	ci right 4.022983e-04	k: 1668	n:4350000
DDX24   4350000 perm   8019 sec   (542 perm/sec)   p_kst 3.834483e-04   p_cons 7.843101e-01   p_joint 2.517241e-04

Joint ci ratio: 1.183930e-01	ci left: 2.364915e-04	ci right 2.664723e-04	k: 1095	n:4360000
Cons ci ratio: 9.844757e-04	ci left: 7.839306e-01	ci right 7.847030e-01	k: 3419622	n:4360000
KS ci ratio: 9.587703e-02	ci left: 3.648785e-04	ci right 4.018453e-04	k: 1670	n:4360000
DDX24   4360000 perm   8056 sec   (541 perm/sec)   p_kst 3.830275e-04   p_cons 7.843170e-01   p_joint 2.511468e-04

Joint ci ratio: 1.181776e-01	ci left: 2.368386e-04	ci right 2.668049e-04	k: 1099	n:4370000
Cons ci ratio: 9.833621e-04	ci left: 7.839264e-01	ci right 7.846979e-01	k: 3427445	n:4370000
KS ci ratio: 9.567680e-02	ci left: 3.656070e-04	ci right 4.025659e-04	k: 1677	n:4370000
DDX24   4370000 perm   8091 sec   (540 perm/sec)   p_kst 3.837529e-04   p_cons 7.843124e-01   p_joint 2.514874e-04

Joint ci ratio: 1.181239e-01	ci left: 2.365194e-04	ci right 2.664309e-04	k: 1100	n:4380000
Cons ci ratio: 9.822297e-04	ci left: 7.839300e-01	ci right 7.847006e-01	k: 3435302	n:4380000
KS ci ratio: 9.556297e-02	ci left: 3.656637e-04	ci right 4.025819e-04	k: 1681	n:4380000
DDX24   4380000 perm   8125 sec   (539 perm/sec)   p_kst 3.837900e-04   p_cons 7.843155e-01   p_joint 2.511416e-04

Joint ci ratio: 1.180703e-01	ci left: 2.362017e-04	ci right 2.660585e-04	k: 1101	n:4390000
Cons ci ratio: 9.811362e-04	ci left: 7.839216e-01	ci right 7.846913e-01	k: 3443106	n:4390000
KS ci ratio: 9.547787e-02	ci left: 3.654978e-04	ci right 4.023646e-04	k: 1684	n:4390000
DDX24   4390000 perm   8160 sec   (538 perm/sec)   p_kst 3.835991e-04   p_cons 7.843066e-01   p_joint 2.507973e-04

Joint ci ratio: 1.179099e-01	ci left: 2.363266e-04	ci right 2.661557e-04	k: 1104	n:4400000
Cons ci ratio: 9.800372e-04	ci left: 7.839163e-01	ci right 7.846852e-01	k: 3450924	n:4400000
KS ci ratio: 9.530830e-02	ci left: 3.659983e-04	ci right 4.028462e-04	k: 1690	n:4400000
DDX24   4400000 perm   8195 sec   (537 perm/sec)   p_kst 3.840909e-04   p_cons 7.843009e-01   p_joint 2.509091e-04

Joint ci ratio: 1.179100e-01	ci left: 2.357907e-04	ci right 2.655522e-04	k: 1104	n:4410000
Cons ci ratio: 9.789241e-04	ci left: 7.839172e-01	ci right 7.846852e-01	k: 3458769	n:4410000
KS ci ratio: 9.525201e-02	ci left: 3.656110e-04	ci right 4.023971e-04	k: 1692	n:4410000
DDX24   4410000 perm   8230 sec   (536 perm/sec)   p_kst 3.836735e-04   p_cons 7.843014e-01   p_joint 2.503401e-04

Joint ci ratio: 1.179100e-01	ci left: 2.352572e-04	ci right 2.649514e-04	k: 1104	n:4420000
Cons ci ratio: 9.778448e-04	ci left: 7.839077e-01	ci right 7.846748e-01	k: 3466568	n:4420000
KS ci ratio: 9.522392e-02	ci left: 3.650047e-04	ci right 4.017183e-04	k: 1693	n:4420000
DDX24   4420000 perm   8265 sec   (535 perm/sec)   p_kst 3.830317e-04   p_cons 7.842914e-01   p_joint 2.497738e-04

Joint ci ratio: 1.178567e-01	ci left: 2.349453e-04	ci right 2.645857e-04	k: 1105	n:4430000
Cons ci ratio: 9.767281e-04	ci left: 7.839124e-01	ci right 7.846787e-01	k: 3474430	n:4430000
KS ci ratio: 9.519586e-02	ci left: 3.644011e-04	ci right 4.010426e-04	k: 1694	n:4430000
DDX24   4430000 perm   8300 sec   (534 perm/sec)   p_kst 3.823928e-04   p_cons 7.842957e-01   p_joint 2.494357e-04

Joint ci ratio: 1.177503e-01	ci left: 2.348533e-04	ci right 2.644535e-04	k: 1107	n:4440000
Cons ci ratio: 9.756068e-04	ci left: 7.839201e-01	ci right 7.846854e-01	k: 3482305	n:4440000
KS ci ratio: 9.513977e-02	ci left: 3.640201e-04	ci right 4.006005e-04	k: 1696	n:4440000
DDX24   4440000 perm   8335 sec   (533 perm/sec)   p_kst 3.819820e-04   p_cons 7.843029e-01   p_joint 2.493243e-04

Joint ci ratio: 1.176442e-01	ci left: 2.347617e-04	ci right 2.643219e-04	k: 1109	n:4450000
Cons ci ratio: 9.745016e-04	ci left: 7.839234e-01	ci right 7.846879e-01	k: 3490161	n:4450000
KS ci ratio: 9.502784e-02	ci left: 3.640796e-04	ci right 4.006206e-04	k: 1700	n:4450000
DDX24   4450000 perm   8371 sec   (532 perm/sec)   p_kst 3.820225e-04   p_cons 7.843058e-01   p_joint 2.492135e-04

Joint ci ratio: 1.175912e-01	ci left: 2.344530e-04	ci right 2.639601e-04	k: 1110	n:4460000
Cons ci ratio: 9.734414e-04	ci left: 7.839124e-01	ci right 7.846760e-01	k: 3497953	n:4460000
KS ci ratio: 9.499995e-02	ci left: 3.634822e-04	ci right 3.999519e-04	k: 1701	n:4460000
DDX24   4460000 perm   8407 sec   (531 perm/sec)   p_kst 3.813901e-04   p_cons 7.842944e-01   p_joint 2.488789e-04

Joint ci ratio: 1.174855e-01	ci left: 2.343627e-04	ci right 2.638301e-04	k: 1112	n:4470000
Cons ci ratio: 9.723789e-04	ci left: 7.839034e-01	ci right 7.846662e-01	k: 3505754	n:4470000
KS ci ratio: 9.488851e-02	ci left: 3.635426e-04	ci right 3.999732e-04	k: 1705	n:4470000
DDX24   4470000 perm   8443 sec   (529 perm/sec)   p_kst 3.814318e-04   p_cons 7.842850e-01   p_joint 2.487696e-04

Joint ci ratio: 1.174856e-01	ci left: 2.338396e-04	ci right 2.632412e-04	k: 1112	n:4480000
Cons ci ratio: 9.713071e-04	ci left: 7.838990e-01	ci right 7.846609e-01	k: 3513575	n:4480000
KS ci ratio: 9.480519e-02	ci left: 3.633849e-04	ci right 3.997659e-04	k: 1708	n:4480000
DDX24   4480000 perm   8479 sec   (528 perm/sec)   p_kst 3.812500e-04   p_cons 7.842801e-01   p_joint 2.482143e-04

Joint ci ratio: 1.173801e-01	ci left: 2.337511e-04	ci right 2.631135e-04	k: 1114	n:4490000
Cons ci ratio: 9.702183e-04	ci left: 7.839017e-01	ci right 7.846628e-01	k: 3521428	n:4490000
KS ci ratio: 9.466680e-02	ci left: 3.636628e-04	ci right 4.000155e-04	k: 1713	n:4490000
DDX24   4490000 perm   8514 sec   (527 perm/sec)   p_kst 3.815145e-04   p_cons 7.842824e-01   p_joint 2.481069e-04

Joint ci ratio: 1.172225e-01	ci left: 2.338788e-04	ci right 2.632150e-04	k: 1117	n:4500000
Cons ci ratio: 9.690969e-04	ci left: 7.839170e-01	ci right 7.846773e-01	k: 3529338	n:4500000
KS ci ratio: 9.452901e-02	ci left: 3.639395e-04	ci right 4.002640e-04	k: 1718	n:4500000
DDX24   4500000 perm   8550 sec   (526 perm/sec)   p_kst 3.817778e-04   p_cons 7.842973e-01   p_joint 2.482222e-04

Joint ci ratio: 1.171702e-01	ci left: 2.335755e-04	ci right 2.628596e-04	k: 1118	n:4510000
Cons ci ratio: 9.680143e-04	ci left: 7.839201e-01	ci right 7.846795e-01	k: 3537193	n:4510000
KS ci ratio: 9.447409e-02	ci left: 3.635655e-04	ci right 3.998304e-04	k: 1720	n:4510000
DDX24   4510000 perm   8585 sec   (525 perm/sec)   p_kst 3.813747e-04   p_cons 7.843000e-01   p_joint 2.478936e-04

Joint ci ratio: 1.171179e-01	ci left: 2.332735e-04	ci right 2.625058e-04	k: 1119	n:4520000
Cons ci ratio: 9.668898e-04	ci left: 7.839391e-01	ci right 7.846977e-01	k: 3545120	n:4520000
KS ci ratio: 9.441926e-02	ci left: 3.631932e-04	ci right 3.993988e-04	k: 1722	n:4520000
DDX24   4520000 perm   8621 sec   (524 perm/sec)   p_kst 3.809735e-04   p_cons 7.843186e-01   p_joint 2.475664e-04

Joint ci ratio: 1.169613e-01	ci left: 2.334014e-04	ci right 2.626079e-04	k: 1122	n:4530000
Cons ci ratio: 9.658795e-04	ci left: 7.839194e-01	ci right 7.846771e-01	k: 3552872	n:4530000
KS ci ratio: 9.428255e-02	ci left: 3.634691e-04	ci right 3.996469e-04	k: 1727	n:4530000
DDX24   4530000 perm   8658 sec   (523 perm/sec)   p_kst 3.812362e-04   p_cons 7.842985e-01   p_joint 2.476821e-04

Joint ci ratio: 1.168054e-01	ci left: 2.335287e-04	ci right 2.627096e-04	k: 1125	n:4540000
Cons ci ratio: 9.648415e-04	ci left: 7.839106e-01	ci right 7.846675e-01	k: 3560673	n:4540000
KS ci ratio: 9.411926e-02	ci left: 3.639590e-04	ci right 4.001193e-04	k: 1733	n:4540000
DDX24   4540000 perm   8694 sec   (522 perm/sec)   p_kst 3.817181e-04   p_cons 7.842892e-01   p_joint 2.477974e-04

Joint ci ratio: 1.168054e-01	ci left: 2.330155e-04	ci right 2.621322e-04	k: 1125	n:4550000
Cons ci ratio: 9.637724e-04	ci left: 7.839139e-01	ci right 7.846699e-01	k: 3568529	n:4550000
KS ci ratio: 9.411930e-02	ci left: 3.631591e-04	ci right 3.992400e-04	k: 1733	n:4550000
DDX24   4550000 perm   8730 sec   (521 perm/sec)   p_kst 3.808791e-04   p_cons 7.842921e-01   p_joint 2.472527e-04

Joint ci ratio: 1.166501e-01	ci left: 2.331432e-04	ci right 2.622344e-04	k: 1128	n:4560000
Cons ci ratio: 9.626826e-04	ci left: 7.839257e-01	ci right 7.846809e-01	k: 3576424	n:4560000
KS ci ratio: 9.398389e-02	ci left: 3.634334e-04	ci right 3.994867e-04	k: 1738	n:4560000
DDX24   4560000 perm   8767 sec   (520 perm/sec)   p_kst 3.811404e-04   p_cons 7.843035e-01   p_joint 2.473684e-04

Joint ci ratio: 1.164955e-01	ci left: 2.332703e-04	ci right 2.623362e-04	k: 1131	n:4570000
Cons ci ratio: 9.616624e-04	ci left: 7.839143e-01	ci right 7.846687e-01	k: 3584213	n:4570000
KS ci ratio: 9.382215e-02	ci left: 3.639202e-04	ci right 3.999563e-04	k: 1744	n:4570000
DDX24   4570000 perm   8804 sec   (519 perm/sec)   p_kst 3.816193e-04   p_cons 7.842917e-01   p_joint 2.474836e-04

Joint ci ratio: 1.163414e-01	ci left: 2.333970e-04	ci right 2.624375e-04	k: 1134	n:4580000
Cons ci ratio: 9.606509e-04	ci left: 7.839010e-01	ci right 7.846546e-01	k: 3591993	n:4580000
KS ci ratio: 9.363450e-02	ci left: 3.646182e-04	ci right 4.006472e-04	k: 1751	n:4580000
DDX24   4580000 perm   8841 sec   (518 perm/sec)   p_kst 3.823144e-04   p_cons 7.842779e-01   p_joint 2.475983e-04

Joint ci ratio: 1.161879e-01	ci left: 2.335231e-04	ci right 2.625383e-04	k: 1137	n:4590000
Cons ci ratio: 9.596316e-04	ci left: 7.838916e-01	ci right 7.846444e-01	k: 3599791	n:4590000
KS ci ratio: 9.355444e-02	ci left: 3.644621e-04	ci right 4.004432e-04	k: 1754	n:4590000
DDX24   4590000 perm   8877 sec   (517 perm/sec)   p_kst 3.821351e-04   p_cons 7.842682e-01   p_joint 2.477124e-04

Joint ci ratio: 1.160351e-01	ci left: 2.336486e-04	ci right 2.626387e-04	k: 1140	n:4600000
Cons ci ratio: 9.585884e-04	ci left: 7.838919e-01	ci right 7.846439e-01	k: 3607633	n:4600000
KS ci ratio: 9.342145e-02	ci left: 3.647313e-04	ci right 4.006851e-04	k: 1759	n:4600000
DDX24   4600000 perm   8915 sec   (516 perm/sec)   p_kst 3.823913e-04   p_cons 7.842680e-01   p_joint 2.478261e-04

Joint ci ratio: 1.159335e-01	ci left: 2.335631e-04	ci right 2.625154e-04	k: 1142	n:4610000
Cons ci ratio: 9.575890e-04	ci left: 7.838778e-01	ci right 7.846290e-01	k: 3615409	n:4610000
KS ci ratio: 9.331546e-02	ci left: 3.647876e-04	ci right 4.007038e-04	k: 1763	n:4610000
DDX24   4610000 perm   8952 sec   (515 perm/sec)   p_kst 3.824295e-04   p_cons 7.842536e-01   p_joint 2.477223e-04

Joint ci ratio: 1.158322e-01	ci left: 2.334779e-04	ci right 2.623926e-04	k: 1144	n:4620000
Cons ci ratio: 9.565806e-04	ci left: 7.838681e-01	ci right 7.846185e-01	k: 3623205	n:4620000
KS ci ratio: 9.318348e-02	ci left: 3.650550e-04	ci right 4.009440e-04	k: 1768	n:4620000
DDX24   4620000 perm   8989 sec   (514 perm/sec)   p_kst 3.826840e-04   p_cons 7.842435e-01   p_joint 2.476190e-04

Joint ci ratio: 1.157817e-01	ci left: 2.331833e-04	ci right 2.620482e-04	k: 1145	n:4630000
Cons ci ratio: 9.555381e-04	ci left: 7.838717e-01	ci right 7.846213e-01	k: 3631062	n:4630000
KS ci ratio: 9.307831e-02	ci left: 3.651104e-04	ci right 4.009621e-04	k: 1772	n:4630000
DDX24   4630000 perm   9026 sec   (513 perm/sec)   p_kst 3.827214e-04   p_cons 7.842467e-01   p_joint 2.473002e-04

Joint ci ratio: 1.157312e-01	ci left: 2.328900e-04	ci right 2.617052e-04	k: 1146	n:4640000
Cons ci ratio: 9.544912e-04	ci left: 7.838780e-01	ci right 7.846268e-01	k: 3638932	n:4640000
KS ci ratio: 9.299967e-02	ci left: 3.649550e-04	ci right 4.007595e-04	k: 1775	n:4640000
DDX24   4640000 perm   9063 sec   (512 perm/sec)   p_kst 3.825431e-04   p_cons 7.842526e-01   p_joint 2.469828e-04

Joint ci ratio: 1.155300e-01	ci left: 2.332245e-04	ci right 2.620274e-04	k: 1150	n:4650000
Cons ci ratio: 9.534761e-04	ci left: 7.838742e-01	ci right 7.846222e-01	k: 3646755	n:4650000
KS ci ratio: 9.279087e-02	ci left: 3.658506e-04	ci right 4.016580e-04	k: 1783	n:4650000
DDX24   4650000 perm   9100 sec   (511 perm/sec)   p_kst 3.834409e-04   p_cons 7.842484e-01   p_joint 2.473118e-04

Joint ci ratio: 1.154798e-01	ci left: 2.329324e-04	ci right 2.616859e-04	k: 1151	n:4660000
Cons ci ratio: 9.524522e-04	ci left: 7.838747e-01	ci right 7.846219e-01	k: 3654598	n:4660000
KS ci ratio: 9.273892e-02	ci left: 3.654847e-04	ci right 4.012352e-04	k: 1785	n:4660000
DDX24   4660000 perm   9138 sec   (510 perm/sec)   p_kst 3.830472e-04   p_cons 7.842485e-01   p_joint 2.469957e-04

Joint ci ratio: 1.153297e-01	ci left: 2.330575e-04	ci right 2.617865e-04	k: 1154	n:4670000
Cons ci ratio: 9.514117e-04	ci left: 7.838823e-01	ci right 7.846287e-01	k: 3662474	n:4670000
KS ci ratio: 9.258352e-02	ci left: 3.659572e-04	ci right 4.016906e-04	k: 1791	n:4670000
DDX24   4670000 perm   9175 sec   (509 perm/sec)   p_kst 3.835118e-04   p_cons 7.842557e-01   p_joint 2.471092e-04

Joint ci ratio: 1.151802e-01	ci left: 2.331821e-04	ci right 2.618866e-04	k: 1157	n:4680000
Cons ci ratio: 9.504377e-04	ci left: 7.838674e-01	ci right 7.846130e-01	k: 3670245	n:4680000
KS ci ratio: 9.245461e-02	ci left: 3.662189e-04	ci right 4.019254e-04	k: 1796	n:4680000
DDX24   4680000 perm   9214 sec   (508 perm/sec)   p_kst 3.837607e-04   p_cons 7.842404e-01   p_joint 2.472222e-04

Joint ci ratio: 1.150809e-01	ci left: 2.330990e-04	ci right 2.617670e-04	k: 1159	n:4690000
Cons ci ratio: 9.494283e-04	ci left: 7.838662e-01	ci right 7.846110e-01	k: 3678080	n:4690000
KS ci ratio: 9.237754e-02	ci left: 3.660629e-04	ci right 4.017229e-04	k: 1799	n:4690000
DDX24   4690000 perm   9253 sec   (507 perm/sec)   p_kst 3.835821e-04   p_cons 7.842388e-01   p_joint 2.471215e-04

Joint ci ratio: 1.147352e-01	ci left: 2.340496e-04	ci right 2.627421e-04	k: 1166	n:4700000
Cons ci ratio: 9.484376e-04	ci left: 7.838595e-01	ci right 7.846035e-01	k: 3685889	n:4700000
KS ci ratio: 9.214741e-02	ci left: 3.671547e-04	ci right 4.028272e-04	k: 1808	n:4700000
DDX24   4700000 perm   9290 sec   (506 perm/sec)   p_kst 3.846809e-04   p_cons 7.842317e-01   p_joint 2.480851e-04

Joint ci ratio: 1.145880e-01	ci left: 2.341714e-04	ci right 2.628395e-04	k: 1169	n:4710000
Cons ci ratio: 9.474411e-04	ci left: 7.838560e-01	ci right 7.845992e-01	k: 3693713	n:4710000
KS ci ratio: 9.202032e-02	ci left: 3.674123e-04	ci right 4.030579e-04	k: 1813	n:4710000
DDX24   4710000 perm   9329 sec   (505 perm/sec)   p_kst 3.849257e-04   p_cons 7.842278e-01   p_joint 2.481953e-04

Joint ci ratio: 1.142953e-01	ci left: 2.349101e-04	ci right 2.635902e-04	k: 1175	n:4720000
Cons ci ratio: 9.463731e-04	ci left: 7.838793e-01	ci right 7.846217e-01	k: 3701663	n:4720000
KS ci ratio: 9.184325e-02	ci left: 3.680829e-04	ci right 4.037211e-04	k: 1820	n:4720000
DDX24   4720000 perm   9368 sec   (504 perm/sec)   p_kst 3.855932e-04   p_cons 7.842506e-01   p_joint 2.489407e-04

Joint ci ratio: 1.142467e-01	ci left: 2.346188e-04	ci right 2.632504e-04	k: 1176	n:4730000
Cons ci ratio: 9.453956e-04	ci left: 7.838713e-01	ci right 7.846129e-01	k: 3709466	n:4730000
KS ci ratio: 9.174255e-02	ci left: 3.681310e-04	ci right 4.037327e-04	k: 1824	n:4730000
DDX24   4730000 perm   9406 sec   (503 perm/sec)   p_kst 3.856237e-04   p_cons 7.842423e-01   p_joint 2.486258e-04

Joint ci ratio: 1.142468e-01	ci left: 2.341238e-04	ci right 2.626950e-04	k: 1176	n:4740000
Cons ci ratio: 9.443662e-04	ci left: 7.838830e-01	ci right 7.846238e-01	k: 3717362	n:4740000
KS ci ratio: 9.171745e-02	ci left: 3.675604e-04	ci right 4.030967e-04	k: 1825	n:4740000
DDX24   4740000 perm   9444 sec   (502 perm/sec)   p_kst 3.850211e-04   p_cons 7.842536e-01   p_joint 2.481013e-04

Joint ci ratio: 1.140048e-01	ci left: 2.346535e-04	ci right 2.632246e-04	k: 1181	n:4750000
Cons ci ratio: 9.433485e-04	ci left: 7.838917e-01	ci right 7.846317e-01	k: 3725244	n:4750000
KS ci ratio: 9.159212e-02	ci left: 3.678151e-04	ci right 4.033248e-04	k: 1830	n:4750000
DDX24   4750000 perm   9483 sec   (501 perm/sec)   p_kst 3.852632e-04   p_cons 7.842619e-01   p_joint 2.486316e-04

Joint ci ratio: 1.138604e-01	ci left: 2.347729e-04	ci right 2.633198e-04	k: 1184	n:4760000
Cons ci ratio: 9.423410e-04	ci left: 7.838979e-01	ci right 7.846371e-01	k: 3733114	n:4760000
KS ci ratio: 9.144240e-02	ci left: 3.682741e-04	ci right 4.037669e-04	k: 1836	n:4760000
DDX24   4760000 perm   9522 sec   (500 perm/sec)   p_kst 3.857143e-04   p_cons 7.842676e-01   p_joint 2.487395e-04

Joint ci ratio: 1.136687e-01	ci left: 2.350954e-04	ci right 2.636302e-04	k: 1188	n:4770000
Cons ci ratio: 9.413811e-04	ci left: 7.838880e-01	ci right 7.846265e-01	k: 3740908	n:4770000
KS ci ratio: 9.124390e-02	ci left: 3.691409e-04	ci right 4.046358e-04	k: 1844	n:4770000
DDX24   4770000 perm   9562 sec   (499 perm/sec)   p_kst 3.865828e-04   p_cons 7.842574e-01   p_joint 2.490566e-04

Joint ci ratio: 1.135256e-01	ci left: 2.352133e-04	ci right 2.637241e-04	k: 1191	n:4780000
Cons ci ratio: 9.403689e-04	ci left: 7.838981e-01	ci right 7.846358e-01	k: 3748797	n:4780000
KS ci ratio: 9.116981e-02	ci left: 3.689819e-04	ci right 4.044312e-04	k: 1847	n:4780000
DDX24   4780000 perm   9601 sec   (498 perm/sec)   p_kst 3.864017e-04   p_cons 7.842672e-01   p_joint 2.491632e-04

Joint ci ratio: 1.133830e-01	ci left: 2.353308e-04	ci right 2.638176e-04	k: 1194	n:4790000
Cons ci ratio: 9.394179e-04	ci left: 7.838873e-01	ci right 7.846242e-01	k: 3756586	n:4790000
KS ci ratio: 9.104672e-02	ci left: 3.692316e-04	ci right 4.046545e-04	k: 1852	n:4790000
DDX24   4790000 perm   9640 sec   (497 perm/sec)   p_kst 3.866388e-04   p_cons 7.842559e-01   p_joint 2.492693e-04

Joint ci ratio: 1.133356e-01	ci left: 2.350430e-04	ci right 2.634823e-04	k: 1195	n:4800000
Cons ci ratio: 9.383791e-04	ci left: 7.839093e-01	ci right 7.846454e-01	k: 3764532	n:4800000
KS ci ratio: 9.102219e-02	ci left: 3.686660e-04	ci right 4.040246e-04	k: 1853	n:4800000
DDX24   4800000 perm   9680 sec   (496 perm/sec)   p_kst 3.860417e-04   p_cons 7.842775e-01   p_joint 2.489583e-04

Joint ci ratio: 1.130523e-01	ci left: 2.357664e-04	ci right 2.642172e-04	k: 1201	n:4810000
Cons ci ratio: 9.374277e-04	ci left: 7.839007e-01	ci right 7.846361e-01	k: 3772332	n:4810000
KS ci ratio: 9.087524e-02	ci left: 3.691186e-04	ci right 4.044604e-04	k: 1859	n:4810000
DDX24   4810000 perm   9720 sec   (495 perm/sec)   p_kst 3.864865e-04   p_cons 7.842686e-01   p_joint 2.496881e-04

Joint ci ratio: 1.130524e-01	ci left: 2.352773e-04	ci right 2.636690e-04	k: 1201	n:4820000
Cons ci ratio: 9.364523e-04	ci left: 7.839020e-01	ci right 7.846366e-01	k: 3780179	n:4820000
KS ci ratio: 9.087528e-02	ci left: 3.683528e-04	ci right 4.036213e-04	k: 1859	n:4820000
DDX24   4820000 perm   9760 sec   (494 perm/sec)   p_kst 3.856846e-04   p_cons 7.842695e-01   p_joint 2.491701e-04

Joint ci ratio: 1.129584e-01	ci left: 2.351925e-04	ci right 2.635489e-04	k: 1203	n:4830000
Cons ci ratio: 9.354943e-04	ci left: 7.838981e-01	ci right 7.846320e-01	k: 3788001	n:4830000
KS ci ratio: 9.082647e-02	ci left: 3.679948e-04	ci right 4.032091e-04	k: 1861	n:4830000
DDX24   4830000 perm   9800 sec   (493 perm/sec)   p_kst 3.853002e-04   p_cons 7.842652e-01   p_joint 2.490683e-04

Joint ci ratio: 1.129585e-01	ci left: 2.347066e-04	ci right 2.630044e-04	k: 1203	n:4840000
Cons ci ratio: 9.345346e-04	ci left: 7.838959e-01	ci right 7.846290e-01	k: 3795831	n:4840000
KS ci ratio: 9.082651e-02	ci left: 3.672345e-04	ci right 4.023760e-04	k: 1861	n:4840000
DDX24   4840000 perm   9838 sec   (492 perm/sec)   p_kst 3.845041e-04   p_cons 7.842626e-01   p_joint 2.485537e-04

Joint ci ratio: 1.127246e-01	ci left: 2.352245e-04	ci right 2.635221e-04	k: 1208	n:4850000
Cons ci ratio: 9.335949e-04	ci left: 7.838875e-01	ci right 7.846198e-01	k: 3803631	n:4850000
KS ci ratio: 9.068051e-02	ci left: 3.676863e-04	ci right 4.028116e-04	k: 1867	n:4850000
DDX24   4850000 perm   9879 sec   (491 perm/sec)   p_kst 3.849485e-04   p_cons 7.842538e-01   p_joint 2.490722e-04

Joint ci ratio: 1.124922e-01	ci left: 2.357403e-04	ci right 2.640376e-04	k: 1213	n:4860000
Cons ci ratio: 9.326410e-04	ci left: 7.838853e-01	ci right 7.846169e-01	k: 3811461	n:4860000
KS ci ratio: 9.055938e-02	ci left: 3.679353e-04	ci right 4.030348e-04	k: 1872	n:4860000
DDX24   4860000 perm   9919 sec   (490 perm/sec)   p_kst 3.851852e-04   p_cons 7.842512e-01   p_joint 2.495885e-04

Joint ci ratio: 1.123535e-01	ci left: 2.358549e-04	ci right 2.641288e-04	k: 1216	n:4870000
Cons ci ratio: 9.316720e-04	ci left: 7.838896e-01	ci right 7.846205e-01	k: 3819323	n:4870000
KS ci ratio: 9.043873e-02	ci left: 3.681832e-04	ci right 4.032572e-04	k: 1877	n:4870000
DDX24   4870000 perm   9959 sec   (489 perm/sec)   p_kst 3.854209e-04   p_cons 7.842552e-01   p_joint 2.496920e-04

Joint ci ratio: 1.123535e-01	ci left: 2.353716e-04	ci right 2.635876e-04	k: 1216	n:4880000
Cons ci ratio: 9.307054e-04	ci left: 7.838942e-01	ci right 7.846243e-01	k: 3827186	n:4880000
KS ci ratio: 9.034257e-02	ci left: 3.682299e-04	ci right 4.032690e-04	k: 1881	n:4880000
DDX24   4880000 perm   9999 sec   (488 perm/sec)   p_kst 3.854508e-04   p_cons 7.842594e-01   p_joint 2.491803e-04

Joint ci ratio: 1.122613e-01	ci left: 2.352878e-04	ci right 2.634690e-04	k: 1218	n:4890000
Cons ci ratio: 9.297670e-04	ci left: 7.838895e-01	ci right 7.846189e-01	k: 3835004	n:4890000
KS ci ratio: 9.027066e-02	ci left: 3.680765e-04	ci right 4.030717e-04	k: 1884	n:4890000
DDX24   4890000 perm   10038 sec   (487 perm/sec)   p_kst 3.852761e-04   p_cons 7.842544e-01   p_joint 2.490798e-04

Joint ci ratio: 1.122613e-01	ci left: 2.348076e-04	ci right 2.629313e-04	k: 1218	n:4900000
Cons ci ratio: 9.288136e-04	ci left: 7.838914e-01	ci right 7.846201e-01	k: 3842854	n:4900000
KS ci ratio: 9.022283e-02	ci left: 3.677243e-04	ci right 4.026665e-04	k: 1886	n:4900000
DDX24   4900000 perm   10077 sec   (486 perm/sec)   p_kst 3.848980e-04   p_cons 7.842559e-01   p_joint 2.485714e-04

Joint ci ratio: 1.122153e-01	ci left: 2.345273e-04	ci right 2.626052e-04	k: 1219	n:4910000
Cons ci ratio: 9.278526e-04	ci left: 7.838972e-01	ci right 7.846251e-01	k: 3850723	n:4910000
KS ci ratio: 9.012735e-02	ci left: 3.677716e-04	ci right 4.026794e-04	k: 1890	n:4910000
DDX24   4910000 perm   10116 sec   (485 perm/sec)   p_kst 3.849287e-04   p_cons 7.842613e-01   p_joint 2.482688e-04

Joint ci ratio: 1.119404e-01	ci left: 2.352360e-04	ci right 2.633251e-04	k: 1225	n:4920000
Cons ci ratio: 9.269267e-04	ci left: 7.838911e-01	ci right 7.846183e-01	k: 3858534	n:4920000
KS ci ratio: 8.993727e-02	ci left: 3.686135e-04	ci right 4.035236e-04	k: 1898	n:4920000
DDX24   4920000 perm   10156 sec   (484 perm/sec)   p_kst 3.857724e-04   p_cons 7.842549e-01   p_joint 2.489837e-04

Joint ci ratio: 1.118947e-01	ci left: 2.349560e-04	ci right 2.629995e-04	k: 1226	n:4930000
Cons ci ratio: 9.259804e-04	ci left: 7.838936e-01	ci right 7.846200e-01	k: 3866387	n:4930000
KS ci ratio: 8.984270e-02	ci left: 3.686590e-04	ci right 4.035346e-04	k: 1902	n:4930000
DDX24   4930000 perm   10195 sec   (484 perm/sec)   p_kst 3.858012e-04   p_cons 7.842570e-01   p_joint 2.486815e-04

Joint ci ratio: 1.118492e-01	ci left: 2.346771e-04	ci right 2.626752e-04	k: 1227	n:4940000
Cons ci ratio: 9.250568e-04	ci left: 7.838888e-01	ci right 7.846145e-01	k: 3874204	n:4940000
KS ci ratio: 8.981913e-02	ci left: 3.681106e-04	ci right 4.029248e-04	k: 1903	n:4940000
DDX24   4940000 perm   10235 sec   (483 perm/sec)   p_kst 3.852227e-04   p_cons 7.842518e-01   p_joint 2.483806e-04

Joint ci ratio: 1.117128e-01	ci left: 2.347922e-04	ci right 2.627676e-04	k: 1230	n:4950000
Cons ci ratio: 9.241272e-04	ci left: 7.838873e-01	ci right 7.846122e-01	k: 3882037	n:4950000
KS ci ratio: 8.974846e-02	ci left: 3.679594e-04	ci right 4.027304e-04	k: 1906	n:4950000
DDX24   4950000 perm   10275 sec   (482 perm/sec)   p_kst 3.850505e-04   p_cons 7.842499e-01   p_joint 2.484848e-04

Joint ci ratio: 1.115769e-01	ci left: 2.349067e-04	ci right 2.628595e-04	k: 1233	n:4960000
Cons ci ratio: 9.232284e-04	ci left: 7.838754e-01	ci right 7.845996e-01	k: 3889819	n:4960000
KS ci ratio: 8.967796e-02	ci left: 3.678088e-04	ci right 4.025369e-04	k: 1909	n:4960000
DDX24   4960000 perm   10315 sec   (481 perm/sec)   p_kst 3.848790e-04   p_cons 7.842377e-01   p_joint 2.485887e-04

Joint ci ratio: 1.115770e-01	ci left: 2.344341e-04	ci right 2.623306e-04	k: 1233	n:4970000
Cons ci ratio: 9.222988e-04	ci left: 7.838759e-01	ci right 7.845994e-01	k: 3897662	n:4970000
KS ci ratio: 8.967799e-02	ci left: 3.670687e-04	ci right 4.017270e-04	k: 1909	n:4970000
DDX24   4970000 perm   10355 sec   (480 perm/sec)   p_kst 3.841046e-04   p_cons 7.842378e-01   p_joint 2.480885e-04

Joint ci ratio: 1.114416e-01	ci left: 2.345490e-04	ci right 2.624231e-04	k: 1236	n:4980000
Cons ci ratio: 9.214157e-04	ci left: 7.838603e-01	ci right 7.845831e-01	k: 3905425	n:4980000
KS ci ratio: 8.960765e-02	ci left: 3.669205e-04	ci right 4.015362e-04	k: 1912	n:4980000
DDX24   4980000 perm   10396 sec   (479 perm/sec)   p_kst 3.839357e-04   p_cons 7.842219e-01   p_joint 2.481928e-04

Joint ci ratio: 1.113067e-01	ci left: 2.346634e-04	ci right 2.625151e-04	k: 1239	n:4990000
Cons ci ratio: 9.205123e-04	ci left: 7.838532e-01	ci right 7.845753e-01	k: 3913230	n:4990000
KS ci ratio: 8.949077e-02	ci left: 3.671648e-04	ci right 4.017559e-04	k: 1917	n:4990000
DDX24   4990000 perm   10436 sec   (478 perm/sec)   p_kst 3.841683e-04   p_cons 7.842144e-01   p_joint 2.482966e-04

Joint ci ratio: 1.113067e-01	ci left: 2.341940e-04	ci right 2.619901e-04	k: 1239	n:5000000
Cons ci ratio: 9.195827e-04	ci left: 7.838568e-01	ci right 7.845781e-01	k: 3921088	n:5000000
KS ci ratio: 8.946747e-02	ci left: 3.666260e-04	ci right 4.011569e-04	k: 1918	n:5000000
DDX24   5000000 perm   10477 sec   (477 perm/sec)   p_kst 3.836000e-04   p_cons 7.842176e-01   p_joint 2.478000e-04

Outputting figure to mutsig2_images.part000000000048/DDX24.2_2612_5000000_0.0003836_0.78422_0.0002478.png
                gene_name: DDX24
               theta_stop: 0.11 
                    nperm: 5000000 
                     p_ks: 0.00038 
        ci_ks_bounds_left: 0.00037 
       ci_ks_bounds_right: 0.00040 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.78 
                  p_joint: 0.00025 
     ci_joint_bounds_left: 0.00023 
    ci_joint_bounds_right: 0.00026 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000048
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 48 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1416>
Subject: Job 8704175: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1416>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000049> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:36:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000049.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000049.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 49  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000049.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    279.43 sec.
    Max Memory :      5726 MB
    Max Swap   :      8453 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
49
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 49
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 49: processing genes 4343 - 4433
Calculating significance of each gene.
Using projection method.
4343	DEFA5	1
4344	DEFA6	1
4345	DEFB1	1
4346	DEFB104A	1
4347	DEFB104B	1
4348	DEFB106A	1
4349	DEFB106B	1
4350	DEFB108B	1
4351	DEFB110	1
4352	DEFB112	1
4353	DEFB113	1
4354	DEFB114	1
4355	DEFB115	1
4356	DEFB116	1
4357	DEFB118	4.932128e-02
4358	DEFB119	1
4359	DEFB121	1
4360	DEFB123	1
4361	DEFB124	1
4362	DEFB125	1
4363	DEFB126	1
4364	DEFB127	1
4365	DEFB128	1
4366	DEFB129	1
4367	DEFB131	1
4368	DEFB132	1
4369	DEFB134	1
4370	DEFB135	1
4371	DEFB136	1
4372	DEFB4A	1
4373	DEGS1	1
4374	DEGS2	1
4375	DEK	1
4376	DEM1	1
4377	DENND1A	1
4378	DENND1B	1
4379	DENND1C	1
4380	DENND2A	1
4381	DENND2C	1
4382	DENND2D	2.135653e-01
4383	DENND3	1
4384	DENND4A	1
4385	DENND4B	3.456625e-01
4386	DENND4C	1.973227e-01
In gene DENND5A the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 3901    n = 1	mu =   2.02e-07
4387	DENND5A	1.093614e-01
4388	DENND5B	1.317107e-02
4389	DENR	1
4390	DEPDC1	1
4391	DEPDC1B	1
4392	DEPDC4	1
4393	DEPDC5	5.147696e-01
4394	DEPDC6	1
4395	DEPDC7	1
4396	DERA	1
4397	DERL1	5.557531e-02
4398	DERL2	1
4399	DERL3	1
4400	DES	1
4401	DET1	1
4402	DEXI	1
4403	DFFA	1
4404	DFFB	1
4405	DFNA5	1
4406	DFNB31	2.997248e-01
4407	DFNB59	1
4408	DGAT1	1
4409	DGAT2	1
4410	DGAT2L6	1.342248e-01
4411	DGCR14	1
4412	DGCR2	1
4413	DGCR6	1
4414	DGCR6L	1
In gene DGCR8 the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 5	N = 2374    n = 1	mu =   1.70e-07
4415	DGCR8	5.752232e-03
4416	DGKA	1
4417	DGKB	6.170011e-02
4418	DGKD	1
4419	DGKE	1
4420	DGKG	2.712653e-01
4421	DGKH	2.297737e-01
4422	DGKI	1
4423	DGKK	1
4424	DGKQ	1.057445e-01
4425	DGKZ	1
4426	DGUOK	1
4427	DHCR24	1
4428	DHCR7	1
4429	DHDDS	1
4430	DHDH	1
4431	DHDPSL	1
4432	DHFR	1
4433	DHFRL1	1
Done

Running MutSig 2:
Scatter job 49: processing genes 4343 - 4433
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DENND5B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.177263e-01	ci left: 9.389515e-02	ci right 1.057391e-01	k: 997	n:10000
Cons ci ratio: 2.762719e-02	ci left: 6.587727e-01	ci right 6.773293e-01	k: 6681	n:10000
KS ci ratio: 2.736895e-01	ci left: 1.734654e-02	ci right 2.293792e-02	k: 200	n:10000
DENND5B   10000 perm   2 sec   (4237 perm/sec)   p_kst 2.000000e-02   p_cons 6.681000e-01   p_joint 9.970000e-02

Joint ci ratio: 1.284389e-01	ci left: 4.163516e-02	ci right 4.739821e-02	k: 889	n:20000
Cons ci ratio: 1.939312e-02	ci left: 6.647905e-01	ci right 6.778596e-01	k: 13427	n:20000
KS ci ratio: 1.927994e-01	ci left: 1.829524e-02	ci right 2.224596e-02	k: 404	n:20000
DENND5B   20000 perm   8 sec   (2464 perm/sec)   p_kst 2.020000e-02   p_cons 6.713500e-01   p_joint 4.445000e-02

Joint ci ratio: 9.345190e-02	ci left: 5.280528e-02	ci right 5.801457e-02	k: 1661	n:30000
Cons ci ratio: 1.582205e-02	ci left: 6.663530e-01	ci right 6.770137e-01	k: 20151	n:30000
KS ci ratio: 1.618985e-01	ci left: 1.761317e-02	ci right 2.074760e-02	k: 574	n:30000
DENND5B   30000 perm   11 sec   (2778 perm/sec)   p_kst 1.913333e-02   p_cons 6.717000e-01   p_joint 5.536667e-02

Joint ci ratio: 1.058495e-01	ci left: 3.139265e-02	ci right 3.492554e-02	k: 1325	n:40000
Cons ci ratio: 1.364727e-02	ci left: 6.688545e-01	ci right 6.780703e-01	k: 26939	n:40000
KS ci ratio: 1.417882e-01	ci left: 1.741914e-02	ci right 2.010137e-02	k: 749	n:40000
DENND5B   40000 perm   14 sec   (2957 perm/sec)   p_kst 1.872500e-02   p_cons 6.734750e-01   p_joint 3.312500e-02

Joint ci ratio: 1.078955e-01	ci left: 2.433059e-02	ci right 2.712484e-02	k: 1285	n:50000
Cons ci ratio: 1.217477e-02	ci left: 6.704933e-01	ci right 6.787264e-01	k: 33731	n:50000
KS ci ratio: 1.254291e-01	ci left: 1.795699e-02	ci right 2.037929e-02	k: 957	n:50000
DENND5B   50000 perm   16 sec   (3061 perm/sec)   p_kst 1.914000e-02   p_cons 6.746200e-01   p_joint 2.570000e-02

Joint ci ratio: 8.674233e-02	ci left: 3.148703e-02	ci right 3.435839e-02	k: 1974	n:60000
Cons ci ratio: 1.082952e-02	ci left: 6.821688e-01	ci right 6.896132e-01	k: 41154	n:60000
KS ci ratio: 1.147861e-01	ci left: 1.797116e-02	ci right 2.017570e-02	k: 1143	n:60000
DENND5B   60000 perm   19 sec   (3099 perm/sec)   p_kst 1.905000e-02   p_cons 6.859000e-01   p_joint 3.290000e-02

Joint ci ratio: 7.289625e-02	ci left: 3.822343e-02	ci right 4.112918e-02	k: 2776	n:70000
Cons ci ratio: 1.003452e-02	ci left: 6.820886e-01	ci right 6.889818e-01	k: 47988	n:70000
KS ci ratio: 1.085602e-01	ci left: 1.729213e-02	ci right 1.929094e-02	k: 1279	n:70000
DENND5B   70000 perm   22 sec   (3124 perm/sec)   p_kst 1.827143e-02   p_cons 6.855429e-01   p_joint 3.965714e-02

Joint ci ratio: 8.491031e-02	ci left: 2.484703e-02	ci right 2.706253e-02	k: 2075	n:80000
Cons ci ratio: 9.632342e-03	ci left: 6.710275e-01	ci right 6.775348e-01	k: 53943	n:80000
KS ci ratio: 1.020064e-01	ci left: 1.719965e-02	ci right 1.906053e-02	k: 1449	n:80000
DENND5B   80000 perm   25 sec   (3140 perm/sec)   p_kst 1.811250e-02   p_cons 6.742875e-01   p_joint 2.593750e-02

Joint ci ratio: 6.243968e-02	ci left: 4.064401e-02	ci right 4.327451e-02	k: 3775	n:90000
Cons ci ratio: 9.106259e-03	ci left: 6.700132e-01	ci right 6.761535e-01	k: 60578	n:90000
KS ci ratio: 9.621020e-02	ci left: 1.723904e-02	ci right 1.899222e-02	k: 1629	n:90000
DENND5B   90000 perm   29 sec   (3131 perm/sec)   p_kst 1.810000e-02   p_cons 6.730889e-01   p_joint 4.194444e-02

Outputting figure to mutsig2_images.part000000000049/DENND5B.3_3909_90000_0.0181_0.67309_0.041944.png
                gene_name: DENND5B
               theta_stop: 0.096 
                    nperm: 90000 
                     p_ks: 0.018 
        ci_ks_bounds_left: 0.017 
       ci_ks_bounds_right: 0.019 
                   p_cons: 0.67 
      ci_cons_bounds_left: 0.67 
     ci_cons_bounds_right: 0.68 
                  p_joint: 0.042 
     ci_joint_bounds_left: 0.041 
    ci_joint_bounds_right: 0.043 

Current progress: 33 percent done.
DGCR8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.501285e-02	ci left: 2.063903e-01	ci right 2.225764e-01	k: 2144	n:10000
Cons ci ratio: 7.525856e-02	ci left: 2.053056e-01	ci right 2.214617e-01	k: 2133	n:10000
KS ci ratio: 9.237174e-02	ci left: 1.455058e-01	ci right 1.596972e-01	k: 1525	n:10000
DGCR8   10000 perm   2 sec   (5711 perm/sec)   p_kst 1.525000e-01   p_cons 2.133000e-01   p_joint 2.144000e-01

Outputting figure to mutsig2_images.part000000000049/DGCR8.3_2374_10000_0.1525_0.2133_0.2144.png
                gene_name: DGCR8
               theta_stop: 0.092 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.21 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.22 

Current progress: 67 percent done.
DENND5A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.335816e-03	ci left: 9.790923e-01	ci right 9.844218e-01	k: 9819	n:10000
KS ci ratio: 2.162371e-02	ci left: 7.582837e-01	ci right 7.749607e-01	k: 7667	n:10000
DENND5A   10000 perm   2 sec   (4646 perm/sec)   p_kst 7.667000e-01   p_cons 9.819000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000049/DENND5A.2_3956_10000_0.7667_0.9819_1.png
                gene_name: DENND5A
               theta_stop: 0.022 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.77 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000049
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 49 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1546>
Subject: Job 8704176: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1546>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000050> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:36:39 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000050.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000050.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 50  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000050.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    318.23 sec.
    Max Memory :      6096 MB
    Max Swap   :      8484 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
50
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 50
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 50: processing genes 4434 - 4523
Calculating significance of each gene.
Using projection method.
4434	DHH	2.772871e-02
4435	DHODH	1
4436	DHPS	1
4437	DHRS1	1
4438	DHRS11	1
4439	DHRS12	1
4440	DHRS13	1
4441	DHRS2	1
4442	DHRS3	1
4443	DHRS4	1
4444	DHRS4L1	1
4445	DHRS4L2	4.036561e-02
4446	DHRS7	9.099149e-02
4447	DHRS7B	1
4448	DHRS7C	1
4449	DHRS9	1
4450	DHRSX	1
4451	DHTKD1	1.224007e-01
4452	DHX15	1
4453	DHX16	1
4454	DHX29	1
In gene DHX30 the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 3572    n = 1	mu =   1.35e-07
4455	DHX30	5.750335e-02
4456	DHX32	1
4457	DHX33	1
4458	DHX34	1
4459	DHX35	1
4460	DHX36	1
4461	DHX37	4.322614e-01
4462	DHX38	1
4463	DHX40	1
4464	DHX57	1
4465	DHX58	1
4466	DHX8	1.000048e-02
4467	DHX9	1
4468	DIABLO	1
4469	DIAPH1	1
4470	DIAPH2	1
4471	DIAPH3	1
In gene DICER1 the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 5872    n = 1	mu =   2.33e-07
    THCA-EL-A3GO-TP	categ 6	N = 5857    n = 1	mu =   1.02e-07
4472	DICER1	2.159459e-02
In gene DIDO1 the following bins exceed PROBCAP:
    THCA-EL-A3CV-TP	categ 6	N = 6624    n = 1	mu =   6.84e-08
4473	DIDO1	4.942499e-02
4474	DIMT1L	1
4475	DIO1	7.690389e-02
4476	DIO2	1
4477	DIO3	1
4478	DIP2A	1
4479	DIP2B	1
4480	DIP2C	1
4481	DIRAS1	1
4482	DIRAS2	1
4483	DIRAS3	1
4484	DIRC1	1
4485	DIRC2	1
4486	DIS3	3.545215e-01
4487	DIS3L	1
4488	DIS3L2	1
4489	DISC1	1.776457e-01
4490	DISP1	1
4491	DISP2	1
4492	DIXDC1	1
4493	DKC1	1
4494	DKFZp761E198	1.684300e-01
4495	DKK1	1
4496	DKK2	1
4497	DKK3	1
4498	DKK4	1
4499	DKKL1	1
4500	DLAT	1.262516e-01
4501	DLC1	2.752662e-02
4502	DLD	1
4503	DLEC1	1
4504	DLEU7	1
4505	DLG1	1.866836e-01
4506	DLG2	1
4507	DLG3	1
4508	DLG4	7.327217e-02
4509	DLG5	2.534483e-01
4510	DLGAP1	1
4511	DLGAP2	1.045572e-02
4512	DLGAP3	1.359926e-01
4513	DLGAP4	1
4514	DLGAP5	2.606610e-01
4515	DLK1	1
4516	DLK2	1
4517	DLL1	2.465937e-01
4518	DLL3	1
4519	DLL4	1
4520	DLST	1
4521	DLX1	1
In gene DLX2 the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 580     n = 1	mu =   2.03e-07
4522	DLX2	6.243937e-02
4523	DLX3	1
Done

Running MutSig 2:
Scatter job 50: processing genes 4434 - 4523
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DICER1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.815829e-02	ci left: 6.502174e-01	ci right 6.688896e-01	k: 6596	n:10000
Cons ci ratio: 2.423853e-02	ci left: 7.145185e-01	ci right 7.321512e-01	k: 7234	n:10000
KS ci ratio: 4.900521e-02	ci left: 3.805230e-01	ci right 3.997410e-01	k: 3901	n:10000
DICER1   10000 perm   3 sec   (3590 perm/sec)   p_kst 3.901000e-01   p_cons 7.234000e-01   p_joint 6.596000e-01

Outputting figure to mutsig2_images.part000000000050/DICER1.5_5873_10000_0.3901_0.7234_0.6596.png
                gene_name: DICER1
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.39 
        ci_ks_bounds_left: 0.38 
       ci_ks_bounds_right: 0.40 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.66 
     ci_joint_bounds_left: 0.65 
    ci_joint_bounds_right: 0.67 

Current progress: 14 percent done.
DHX8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.434269e-02	ci left: 5.559172e-01	ci right 5.754445e-01	k: 5657	n:10000
Cons ci ratio: 2.700660e-02	ci left: 6.688421e-01	ci right 6.872541e-01	k: 6781	n:10000
KS ci ratio: 4.130420e-02	ci left: 4.639725e-01	ci right 4.836428e-01	k: 4738	n:10000
DHX8   10000 perm   2 sec   (4653 perm/sec)   p_kst 4.738000e-01   p_cons 6.781000e-01   p_joint 5.657000e-01

Outputting figure to mutsig2_images.part000000000050/DHX8.3_3755_10000_0.4738_0.6781_0.5657.png
                gene_name: DHX8
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.68 
      ci_cons_bounds_left: 0.67 
     ci_cons_bounds_right: 0.69 
                  p_joint: 0.57 
     ci_joint_bounds_left: 0.56 
    ci_joint_bounds_right: 0.58 

Current progress: 29 percent done.
DIDO1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.448821e-02	ci left: 2.610197e-01	ci right 2.785146e-01	k: 2697	n:10000
Cons ci ratio: 9.212254e-02	ci left: 1.461923e-01	ci right 1.604103e-01	k: 1532	n:10000
KS ci ratio: 6.981304e-02	ci left: 2.312609e-01	ci right 2.480910e-01	k: 2396	n:10000
DIDO1   10000 perm   3 sec   (3491 perm/sec)   p_kst 2.396000e-01   p_cons 1.532000e-01   p_joint 2.697000e-01

Outputting figure to mutsig2_images.part000000000050/DIDO1.3_6909_10000_0.2396_0.1532_0.2697.png
                gene_name: DIDO1
               theta_stop: 0.092 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.26 
    ci_joint_bounds_right: 0.28 

Current progress: 43 percent done.
DLC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.252558e-01	ci left: 8.358655e-02	ci right 9.485408e-02	k: 891	n:10000
Cons ci ratio: 1.749511e-01	ci left: 4.360497e-02	ci right 5.206094e-02	k: 477	n:10000
KS ci ratio: 6.344096e-02	ci left: 2.674529e-01	ci right 2.850777e-01	k: 2762	n:10000
DLC1   10000 perm   2 sec   (4340 perm/sec)   p_kst 2.762000e-01   p_cons 4.770000e-02   p_joint 8.910000e-02

Joint ci ratio: 8.122727e-02	ci left: 1.000476e-01	ci right 1.085678e-01	k: 2085	n:20000
Cons ci ratio: 1.253030e-01	ci left: 4.371988e-02	ci right 4.961282e-02	k: 932	n:20000
KS ci ratio: 4.557722e-02	ci left: 2.638063e-01	ci right 2.761606e-01	k: 5399	n:20000
DLC1   20000 perm   5 sec   (3958 perm/sec)   p_kst 2.699500e-01   p_cons 4.660000e-02   p_joint 1.042500e-01

Joint ci ratio: 5.002530e-02	ci left: 1.656328e-01	ci right 1.741645e-01	k: 5096	n:30000
Cons ci ratio: 1.074221e-01	ci left: 4.021255e-02	ci right 4.480992e-02	k: 1274	n:30000
KS ci ratio: 3.724521e-02	ci left: 2.646175e-01	ci right 2.746938e-01	k: 8089	n:30000
DLC1   30000 perm   8 sec   (3800 perm/sec)   p_kst 2.696333e-01   p_cons 4.246667e-02   p_joint 1.698667e-01

Joint ci ratio: 3.731611e-02	ci left: 2.121741e-01	ci right 2.202671e-01	k: 8648	n:40000
Cons ci ratio: 9.243597e-02	ci left: 4.103278e-02	ci right 4.503391e-02	k: 1720	n:40000
KS ci ratio: 3.232440e-02	ci left: 2.644598e-01	ci right 2.731738e-01	k: 10752	n:40000
DLC1   40000 perm   11 sec   (3714 perm/sec)   p_kst 2.688000e-01   p_cons 4.300000e-02   p_joint 2.162000e-01

Outputting figure to mutsig2_images.part000000000050/DLC1.3_4740_40000_0.2688_0.043_0.2162.png
                gene_name: DLC1
               theta_stop: 0.092 
                    nperm: 40000 
                     p_ks: 0.27 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.27 
                   p_cons: 0.043 
      ci_cons_bounds_left: 0.041 
     ci_cons_bounds_right: 0.045 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.22 

Current progress: 57 percent done.
DHX30
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.916815e-02	ci left: 6.341223e-01	ci right 6.529940e-01	k: 6436	n:10000
KS ci ratio: 5.013191e-03	ci left: 9.813449e-01	ci right 9.863675e-01	k: 9840	n:10000
DHX30   10000 perm   2 sec   (5191 perm/sec)   p_kst 9.840000e-01   p_cons 6.436000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000050/DHX30.2_3676_10000_0.984_0.6436_1.png
                gene_name: DHX30
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.98 
        ci_ks_bounds_left: 0.98 
       ci_ks_bounds_right: 0.99 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 71 percent done.
DLG5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.447565e-02	ci left: 5.540129e-01	ci right 5.735499e-01	k: 5638	n:10000
Cons ci ratio: 1.628172e-02	ci left: 8.458050e-01	ci right 8.597888e-01	k: 8529	n:10000
KS ci ratio: 5.755268e-02	ci left: 3.076861e-01	ci right 3.260207e-01	k: 3168	n:10000
DLG5   10000 perm   2 sec   (4284 perm/sec)   p_kst 3.168000e-01   p_cons 8.529000e-01   p_joint 5.638000e-01

Outputting figure to mutsig2_images.part000000000050/DLG5.2_5888_10000_0.3168_0.8529_0.5638.png
                gene_name: DLG5
               theta_stop: 0.058 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.85 
      ci_cons_bounds_left: 0.85 
     ci_cons_bounds_right: 0.86 
                  p_joint: 0.56 
     ci_joint_bounds_left: 0.55 
    ci_joint_bounds_right: 0.57 

Current progress: 86 percent done.
DLGAP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.000510e-02	ci left: 2.302732e-01	ci right 2.470793e-01	k: 2386	n:10000
Cons ci ratio: 1.330186e-01	ci left: 7.456177e-02	ci right 8.528446e-02	k: 798	n:10000
KS ci ratio: 1.329427e-02	ci left: 8.907739e-01	ci right 9.027938e-01	k: 8969	n:10000
DLGAP2   10000 perm   2 sec   (5588 perm/sec)   p_kst 8.969000e-01   p_cons 7.980000e-02   p_joint 2.386000e-01

Joint ci ratio: 1.391582e-02	ci left: 7.930747e-01	ci right 8.042384e-01	k: 15974	n:20000
Cons ci ratio: 9.292732e-02	ci left: 7.789098e-02	ci right 8.553115e-02	k: 1633	n:20000
KS ci ratio: 9.345729e-03	ci left: 8.936717e-01	ci right 9.021123e-01	k: 17959	n:20000
DLGAP2   20000 perm   4 sec   (4913 perm/sec)   p_kst 8.979500e-01   p_cons 8.165000e-02   p_joint 7.987000e-01

Outputting figure to mutsig2_images.part000000000050/DLGAP2.2_2972_20000_0.89795_0.08165_0.7987.png
                gene_name: DLGAP2
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.90 
        ci_ks_bounds_left: 0.89 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.082 
      ci_cons_bounds_left: 0.078 
     ci_cons_bounds_right: 0.086 
                  p_joint: 0.80 
     ci_joint_bounds_left: 0.79 
    ci_joint_bounds_right: 0.80 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000050
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 50 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1712>
Subject: Job 8704179: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1712>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000051> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:37:02 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000051.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000051.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 51  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000051.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    255.74 sec.
    Max Memory :      5957 MB
    Max Swap   :      8488 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
51
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 51
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 51: processing genes 4524 - 4614
Calculating significance of each gene.
Using projection method.
4524	DLX4	1
4525	DLX5	1
4526	DLX6	1
4527	DMAP1	7.604671e-02
4528	DMBT1	3.346420e-01
4529	DMBX1	1
4530	DMC1	1
4531	DMD	6.498087e-01
4532	DMGDH	3.007473e-01
4533	DMKN	1
4534	DMP1	1.768767e-01
4535	DMPK	1
4536	DMRT1	1
4537	DMRT2	1
4538	DMRT3	1.352931e-01
4539	DMRTA1	1
4540	DMRTA2	1
4541	DMRTB1	8.017666e-02
4542	DMRTC2	1.065906e-01
4543	DMTF1	1
4544	DMWD	1
4545	DMXL1	4.122822e-01
4546	DMXL2	3.635987e-01
4547	DNA2	1
4548	DNAH1	7.124729e-02
4549	DNAH10	4.565252e-01
4550	DNAH11	6.536794e-01
4551	DNAH17	1
4552	DNAH2	3.313524e-02
4553	DNAH3	4.033904e-01
4554	DNAH5	1.110816e-01
4555	DNAH7	5.952533e-01
In gene DNAH8 the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 6	N = 13829   n = 1	mu =   6.65e-08
4556	DNAH8	1.275471e-01
4557	DNAH9	2.182663e-02
4558	DNAI1	1
4559	DNAI2	2.228247e-01
4560	DNAJA1	1
4561	DNAJA2	1
4562	DNAJA3	1
4563	DNAJA4	1
4564	DNAJB1	1
4565	DNAJB11	1.028777e-01
4566	DNAJB12	1
4567	DNAJB13	1
4568	DNAJB14	1
4569	DNAJB2	1
4570	DNAJB3	1
4571	DNAJB4	1
4572	DNAJB5	1
4573	DNAJB6	1
4574	DNAJB7	1
4575	DNAJB8	1
4576	DNAJB9	1
4577	DNAJC1	7.188847e-02
4578	DNAJC10	1
4579	DNAJC11	1.052607e-01
4580	DNAJC12	1
In gene DNAJC13 the following bins exceed PROBCAP:
    THCA-DJ-A13V-TP	categ 5	N = 6952    n = 1	mu =   9.97e-08
4581	DNAJC13	3.973099e-01
4582	DNAJC14	1
4583	DNAJC15	1
4584	DNAJC16	2.460192e-01
4585	DNAJC17	1.498229e-01
4586	DNAJC18	1
4587	DNAJC19	1
4588	DNAJC2	1
4589	DNAJC21	4.525190e-02
4590	DNAJC22	1.513588e-01
4591	DNAJC24	1
4592	DNAJC25	1.004754e-01
4593	DNAJC25-GNG10	1
4594	DNAJC27	1
4595	DNAJC28	1
4596	DNAJC3	1
4597	DNAJC30	1
4598	DNAJC4	1
4599	DNAJC5	1
4600	DNAJC5B	1
4601	DNAJC5G	1
4602	DNAJC6	1
4603	DNAJC7	1
4604	DNAJC8	1
4605	DNAJC9	1
4606	DNAL1	1
4607	DNAL4	1
4608	DNALI1	1
4609	DNASE1	1
4610	DNASE1L1	1
4611	DNASE1L2	1
4612	DNASE1L3	1
4613	DNASE2	5.244578e-04
4614	DNASE2B	1
Done

Running MutSig 2:
Scatter job 51: processing genes 4524 - 4614
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DNAH9
Processing conservation and coverage...
72% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.415671e-02	ci left: 3.343879e-01	ci right 3.531032e-01	k: 3437	n:10000
Cons ci ratio: 6.250251e-02	ci left: 2.733932e-01	ci right 2.911338e-01	k: 2822	n:10000
KS ci ratio: 5.667384e-02	ci left: 3.143335e-01	ci right 3.327693e-01	k: 3235	n:10000
DNAH9   10000 perm   3 sec   (3066 perm/sec)   p_kst 3.235000e-01   p_cons 2.822000e-01   p_joint 3.437000e-01

Outputting figure to mutsig2_images.part000000000051/DNAH9.6_13737_10000_0.3235_0.2822_0.3437.png
                gene_name: DNAH9
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.34 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.35 

Current progress: 10 percent done.
DNAH2
Processing conservation and coverage...
73% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.158142e-02	ci left: 7.589922e-01	ci right 7.756518e-01	k: 7674	n:10000
Cons ci ratio: 1.349449e-02	ci left: 8.879038e-01	ci right 9.000656e-01	k: 8941	n:10000
KS ci ratio: 3.051687e-02	ci left: 6.130147e-01	ci right 6.321138e-01	k: 6226	n:10000
DNAH2   10000 perm   3 sec   (3186 perm/sec)   p_kst 6.226000e-01   p_cons 8.941000e-01   p_joint 7.674000e-01

Outputting figure to mutsig2_images.part000000000051/DNAH2.5_13624_10000_0.6226_0.8941_0.7674.png
                gene_name: DNAH2
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.62 
        ci_ks_bounds_left: 0.61 
       ci_ks_bounds_right: 0.63 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 0.77 
     ci_joint_bounds_left: 0.76 
    ci_joint_bounds_right: 0.78 

Current progress: 20 percent done.
DNAH1
Processing conservation and coverage...
76% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.840456e-02	ci left: 8.117176e-01	ci right 8.268959e-01	k: 8194	n:10000
KS ci ratio: 1.994303e-02	ci left: 7.863438e-01	ci right 8.022844e-01	k: 7944	n:10000
DNAH1   10000 perm   3 sec   (3293 perm/sec)   p_kst 7.944000e-01   p_cons 8.194000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000051/DNAH1.4_13106_10000_0.7944_0.8194_1.png
                gene_name: DNAH1
               theta_stop: 0.020 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.79 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.83 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 30 percent done.
DNAH5
Processing conservation and coverage...
70% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.387201e-02	ci left: 2.647803e-01	ci right 2.823518e-01	k: 2735	n:10000
Cons ci ratio: 2.234215e-02	ci left: 7.462447e-01	ci right 7.632067e-01	k: 7548	n:10000
KS ci ratio: 1.181872e-01	ci left: 9.321372e-02	ci right 1.050210e-01	k: 990	n:10000
DNAH5   10000 perm   3 sec   (3100 perm/sec)   p_kst 9.900000e-02   p_cons 7.548000e-01   p_joint 2.735000e-01

Joint ci ratio: 5.128859e-02	ci left: 2.202188e-01	ci right 2.318610e-01	k: 4520	n:20000
Cons ci ratio: 1.578772e-02	ci left: 7.490280e-01	ci right 7.609978e-01	k: 15101	n:20000
KS ci ratio: 8.663852e-02	ci left: 8.881317e-02	ci right 9.690565e-02	k: 1856	n:20000
DNAH5   20000 perm   7 sec   (2927 perm/sec)   p_kst 9.280000e-02   p_cons 7.550500e-01   p_joint 2.260000e-01

Outputting figure to mutsig2_images.part000000000051/DNAH5.4_14191_20000_0.0928_0.75505_0.226.png
                gene_name: DNAH5
               theta_stop: 0.087 
                    nperm: 20000 
                     p_ks: 0.093 
        ci_ks_bounds_left: 0.089 
       ci_ks_bounds_right: 0.097 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.75 
     ci_cons_bounds_right: 0.76 
                  p_joint: 0.23 
     ci_joint_bounds_left: 0.22 
    ci_joint_bounds_right: 0.23 

Current progress: 40 percent done.
DNAH8
Processing conservation and coverage...
72% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.179813e-02	ci left: 9.114205e-01	ci right 9.223352e-01	k: 9170	n:10000
Cons ci ratio: 4.750450e-02	ci left: 3.953575e-01	ci right 4.146978e-01	k: 4050	n:10000
KS ci ratio: 8.266728e-03	ci left: 9.533608e-01	ci right 9.613700e-01	k: 9575	n:10000
DNAH8   10000 perm   3 sec   (3082 perm/sec)   p_kst 9.575000e-01   p_cons 4.050000e-01   p_joint 9.170000e-01

Outputting figure to mutsig2_images.part000000000051/DNAH8.4_13829_10000_0.9575_0.405_0.917.png
                gene_name: DNAH8
               theta_stop: 0.048 
                    nperm: 10000 
                     p_ks: 0.96 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.96 
                   p_cons: 0.41 
      ci_cons_bounds_left: 0.40 
     ci_cons_bounds_right: 0.41 
                  p_joint: 0.92 
     ci_joint_bounds_left: 0.91 
    ci_joint_bounds_right: 0.92 

Current progress: 50 percent done.
DNASE2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.737869e-02	ci left: 5.138555e-01	ci right 5.335307e-01	k: 5237	n:10000
Cons ci ratio: 3.910801e-02	ci left: 4.912511e-01	ci right 5.109483e-01	k: 5011	n:10000
KS ci ratio: 5.368008e-02	ci left: 3.383613e-01	ci right 3.571274e-01	k: 3477	n:10000
DNASE2   10000 perm   2 sec   (5698 perm/sec)   p_kst 3.477000e-01   p_cons 5.011000e-01   p_joint 5.237000e-01

Outputting figure to mutsig2_images.part000000000051/DNASE2.3_1107_10000_0.3477_0.5011_0.5237.png
                gene_name: DNASE2
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.35 
        ci_ks_bounds_left: 0.34 
       ci_ks_bounds_right: 0.36 
                   p_cons: 0.50 
      ci_cons_bounds_left: 0.49 
     ci_cons_bounds_right: 0.51 
                  p_joint: 0.52 
     ci_joint_bounds_left: 0.51 
    ci_joint_bounds_right: 0.53 

Current progress: 60 percent done.
DMXL1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.890521e-02	ci left: 4.938506e-01	ci right 5.135473e-01	k: 5037	n:10000
Cons ci ratio: 4.419792e-02	ci left: 4.304391e-01	ci right 4.499957e-01	k: 4402	n:10000
KS ci ratio: 5.637744e-02	ci left: 3.166160e-01	ci right 3.350856e-01	k: 3258	n:10000
DMXL1   10000 perm   2 sec   (4159 perm/sec)   p_kst 3.258000e-01   p_cons 4.402000e-01   p_joint 5.037000e-01

Outputting figure to mutsig2_images.part000000000051/DMXL1.2_9256_10000_0.3258_0.4402_0.5037.png
                gene_name: DMXL1
               theta_stop: 0.056 
                    nperm: 10000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 70 percent done.
DMXL2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.483567e-02	ci left: 3.288264e-01	ci right 3.474680e-01	k: 3381	n:10000
KS ci ratio: 3.935118e-02	ci left: 4.881520e-01	ci right 5.078491e-01	k: 4980	n:10000
DMXL2   10000 perm   2 sec   (4031 perm/sec)   p_kst 4.980000e-01   p_cons 3.381000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000051/DMXL2.2_9286_10000_0.498_0.3381_1.png
                gene_name: DMXL2
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.50 
        ci_ks_bounds_left: 0.49 
       ci_ks_bounds_right: 0.51 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.35 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 80 percent done.
DNAH10
Processing conservation and coverage...
72% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.286976e-03	ci left: 9.531520e-01	ci right 9.611789e-01	k: 9573	n:10000
Cons ci ratio: 4.453122e-02	ci left: 4.267492e-01	ci right 4.462878e-01	k: 4365	n:10000
KS ci ratio: 3.930400e-02	ci left: 4.887518e-01	ci right 5.084490e-01	k: 4986	n:10000
DNAH10   10000 perm   3 sec   (3248 perm/sec)   p_kst 4.986000e-01   p_cons 4.365000e-01   p_joint 9.573000e-01

Outputting figure to mutsig2_images.part000000000051/DNAH10.2_13728_10000_0.4986_0.4365_0.9573.png
                gene_name: DNAH10
               theta_stop: 0.045 
                    nperm: 10000 
                     p_ks: 0.50 
        ci_ks_bounds_left: 0.49 
       ci_ks_bounds_right: 0.51 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.96 
     ci_joint_bounds_left: 0.95 
    ci_joint_bounds_right: 0.96 

Current progress: 90 percent done.
DNAH3
Processing conservation and coverage...
79% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.661160e-02	ci left: 6.752890e-01	ci right 6.936034e-01	k: 6845	n:10000
KS ci ratio: 8.113531e-03	ci left: 9.549276e-01	ci right 9.628022e-01	k: 9590	n:10000
DNAH3   10000 perm   3 sec   (3450 perm/sec)   p_kst 9.590000e-01   p_cons 6.845000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000051/DNAH3.2_12598_10000_0.959_0.6845_1.png
                gene_name: DNAH3
               theta_stop: 0.027 
                    nperm: 10000 
                     p_ks: 0.96 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.96 
                   p_cons: 0.68 
      ci_cons_bounds_left: 0.68 
     ci_cons_bounds_right: 0.69 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000051
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 51 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1538>
Subject: Job 8704180: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1538>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000052> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 20:24:38 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000052.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000052.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 52  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000052.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   3442.51 sec.
    Max Memory :      6087 MB
    Max Swap   :      8489 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
52
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 52
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 52: processing genes 4615 - 4704
Calculating significance of each gene.
Using projection method.
4615	DND1	1
4616	DNER	1
4617	DNHD1	4.215323e-01
4618	DNLZ	1
4619	DNM1	1
4620	DNM1L	1
4621	DNM2	1
4622	DNM3	1
4623	DNMBP	1
4624	DNMT1	5.675591e-01
In gene DNMT3A the following bins exceed PROBCAP:
    THCA-DJ-A2Q2-TP	categ 6	N = 2582    n = 1	mu =   1.04e-07
    THCA-FY-A3ON-TP	categ 6	N = 2689    n = 1	mu =   2.03e-07
4625	DNMT3A	1.161520e-04
4626	DNMT3B	1
4627	DNMT3L	1
4628	DNPEP	1
4629	DNTT	1
4630	DNTTIP1	9.588746e-03
4631	DNTTIP2	1
4632	DOC2A	1
4633	DOCK1	1
4634	DOCK10	5.667935e-01
4635	DOCK11	2.393602e-01
4636	DOCK2	5.775304e-01
4637	DOCK3	3.262137e-01
4638	DOCK4	4.566530e-01
4639	DOCK5	1.565509e-01
4640	DOCK6	4.094310e-01
4641	DOCK7	3.368321e-01
4642	DOCK8	1
4643	DOCK9	1
4644	DOHH	1
4645	DOK1	1.573477e-01
4646	DOK2	1.424810e-01
4647	DOK3	1
4648	DOK4	1
4649	DOK5	1.069336e-01
4650	DOK6	4.564415e-02
4651	DOK7	1
4652	DOLK	1
4653	DOLPP1	1
4654	DOM3Z	1
4655	DONSON	1
4656	DOPEY1	1
4657	DOPEY2	5.988519e-01
4658	DOT1L	2.520363e-01
4659	DPAGT1	1
4660	DPCD	1
4661	DPEP1	1
4662	DPEP2	1
4663	DPEP3	1
4664	DPF1	1
4665	DPF2	1
4666	DPF3	1
4667	DPH1	1.548928e-02
4668	DPH2	1
4669	DPH3	1
4670	DPH3B	1
4671	DPH5	1
4672	DPM1	1
4673	DPM2	1
4674	DPM3	1
4675	DPP10	1
4676	DPP3	1
4677	DPP4	1
4678	DPP6	1
4679	DPP7	1
4680	DPP8	1
4681	DPP9	1
4682	DPPA2	1
4683	DPPA3	1
4684	DPPA4	1
4685	DPPA5	1
4686	DPRX	1
4687	DPT	1
4688	DPY19L1	1
4689	DPY19L2	1
4690	DPY19L3	1
In gene DPY19L4 the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 2228    n = 1	mu =   2.41e-07
4691	DPY19L4	2.334225e-01
4692	DPY30	1
4693	DPYD	1
4694	DPYS	1.053171e-02
4695	DPYSL2	1
4696	DPYSL3	1
4697	DPYSL4	1
4698	DPYSL5	1
4699	DQX1	1
4700	DR1	1
In gene DRAM1 the following bins exceed PROBCAP:
    THCA-EL-A3CM-TP	categ 6	N = 610     n = 1	mu =   1.06e-07
4701	DRAM1	3.328188e-02
4702	DRAM2	1
4703	DRAP1	1
4704	DRD1	1
Done

Running MutSig 2:
Scatter job 52: processing genes 4615 - 4704
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DNMT3A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.888187e-02	ci left: 3.817174e-01	ci right 4.009460e-01	k: 3913	n:10000
Cons ci ratio: 7.094230e-02	ci left: 2.255330e-01	ci right 2.422223e-01	k: 2338	n:10000
KS ci ratio: 4.746511e-02	ci left: 3.957559e-01	ci right 4.150992e-01	k: 4054	n:10000
DNMT3A   10000 perm   2 sec   (4477 perm/sec)   p_kst 4.054000e-01   p_cons 2.338000e-01   p_joint 3.913000e-01

Outputting figure to mutsig2_images.part000000000052/DNMT3A.5_2960_10000_0.4054_0.2338_0.3913.png
                gene_name: DNMT3A
               theta_stop: 0.071 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.23 
      ci_cons_bounds_left: 0.23 
     ci_cons_bounds_right: 0.24 
                  p_joint: 0.39 
     ci_joint_bounds_left: 0.38 
    ci_joint_bounds_right: 0.40 

Current progress: 17 percent done.
DNTTIP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.626723e-02	ci left: 6.809317e-01	ci right 6.991575e-01	k: 6901	n:10000
KS ci ratio: 1.624928e-02	ci left: 8.463146e-01	ci right 8.602789e-01	k: 8534	n:10000
DNTTIP1   10000 perm   1 sec   (6675 perm/sec)   p_kst 8.534000e-01   p_cons 6.901000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000052/DNTTIP1.2_1042_10000_0.8534_0.6901_1.png
                gene_name: DNTTIP1
               theta_stop: 0.026 
                    nperm: 10000 
                     p_ks: 0.85 
        ci_ks_bounds_left: 0.85 
       ci_ks_bounds_right: 0.86 
                   p_cons: 0.69 
      ci_cons_bounds_left: 0.68 
     ci_cons_bounds_right: 0.70 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
DOCK11
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.326580e-01	ci left: 7.494951e-02	ci right 8.569647e-02	k: 802	n:10000
Cons ci ratio: 4.056430e-03	ci left: 9.873032e-01	ci right 9.914042e-01	k: 9895	n:10000
KS ci ratio: 3.602602e-01	ci left: 9.594514e-03	ci right 1.389697e-02	k: 116	n:10000
DOCK11   10000 perm   2 sec   (4046 perm/sec)   p_kst 1.160000e-02   p_cons 9.895000e-01   p_joint 8.020000e-02

Joint ci ratio: 1.025756e-01	ci left: 6.454903e-02	ci right 7.157718e-02	k: 1360	n:20000
Cons ci ratio: 2.848104e-03	ci left: 9.880955e-01	ci right 9.909595e-01	k: 19792	n:20000
KS ci ratio: 2.658944e-01	ci left: 9.320579e-03	ci right 1.222429e-02	k: 214	n:20000
DOCK11   20000 perm   5 sec   (3674 perm/sec)   p_kst 1.070000e-02   p_cons 9.896000e-01   p_joint 6.800000e-02

Joint ci ratio: 4.383006e-02	ci left: 2.058654e-01	ci right 2.151241e-01	k: 6314	n:30000
Cons ci ratio: 2.360915e-03	ci left: 9.880354e-01	ci right 9.904018e-01	k: 29678	n:30000
KS ci ratio: 2.179593e-01	ci left: 9.503598e-03	ci right 1.185927e-02	k: 319	n:30000
DOCK11   30000 perm   9 sec   (3521 perm/sec)   p_kst 1.063333e-02   p_cons 9.892667e-01   p_joint 2.104667e-01

Joint ci ratio: 3.759913e-02	ci left: 2.096416e-01	ci right 2.177000e-01	k: 8546	n:40000
Cons ci ratio: 2.047852e-03	ci left: 9.881644e-01	ci right 9.902136e-01	k: 39569	n:40000
KS ci ratio: 1.891328e-01	ci left: 9.619560e-03	ci right 1.165242e-02	k: 424	n:40000
DOCK11   40000 perm   12 sec   (3437 perm/sec)   p_kst 1.060000e-02   p_cons 9.892250e-01   p_joint 2.136500e-01

Joint ci ratio: 2.397468e-02	ci left: 3.442026e-01	ci right 3.525750e-01	k: 17419	n:50000
Cons ci ratio: 1.994517e-03	ci left: 9.862174e-01	ci right 9.882054e-01	k: 49362	n:50000
KS ci ratio: 1.703446e-01	ci left: 9.586755e-03	ci right 1.139076e-02	k: 523	n:50000
DOCK11   50000 perm   15 sec   (3375 perm/sec)   p_kst 1.046000e-02   p_cons 9.872400e-01   p_joint 3.483800e-01

Joint ci ratio: 2.194940e-02	ci left: 3.432568e-01	ci right 3.508913e-01	k: 20824	n:60000
Cons ci ratio: 1.818586e-03	ci left: 9.863372e-01	ci right 9.881485e-01	k: 59236	n:60000
KS ci ratio: 1.563596e-01	ci left: 9.555608e-03	ci right 1.119227e-02	k: 621	n:60000
DOCK11   60000 perm   18 sec   (3312 perm/sec)   p_kst 1.035000e-02   p_cons 9.872667e-01   p_joint 3.470667e-01

Joint ci ratio: 2.029613e-02	ci left: 3.441000e-01	ci right 3.511698e-01	k: 24334	n:70000
Cons ci ratio: 1.695596e-03	ci left: 9.862217e-01	ci right 9.879090e-01	k: 69096	n:70000
KS ci ratio: 1.464702e-01	ci left: 9.386263e-03	ci right 1.088333e-02	k: 708	n:70000
DOCK11   70000 perm   21 sec   (3258 perm/sec)   p_kst 1.011429e-02   p_cons 9.870857e-01   p_joint 3.476286e-01

Joint ci ratio: 1.893748e-02	ci left: 3.454718e-01	ci right 3.520892e-01	k: 27902	n:80000
Cons ci ratio: 1.464945e-03	ci left: 9.882143e-01	ci right 9.896750e-01	k: 79117	n:80000
KS ci ratio: 1.374641e-01	ci left: 9.370380e-03	ci right 1.076549e-02	k: 804	n:80000
DOCK11   80000 perm   25 sec   (3208 perm/sec)   p_kst 1.005000e-02   p_cons 9.889625e-01   p_joint 3.487750e-01

Joint ci ratio: 7.688212e-03	ci left: 7.399645e-01	ci right 7.456865e-01	k: 66855	n:90000
Cons ci ratio: 1.383624e-03	ci left: 9.882169e-01	ci right 9.895958e-01	k: 89003	n:90000
KS ci ratio: 1.290013e-01	ci left: 9.500038e-03	ci right 1.082071e-02	k: 913	n:90000
DOCK11   90000 perm   29 sec   (3157 perm/sec)   p_kst 1.014444e-02   p_cons 9.889222e-01   p_joint 7.428333e-01

Joint ci ratio: 7.288399e-03	ci left: 7.403900e-01	ci right 7.458159e-01	k: 74311	n:100000
Cons ci ratio: 1.317471e-03	ci left: 9.881695e-01	ci right 9.894819e-01	k: 98884	n:100000
KS ci ratio: 1.225373e-01	ci left: 9.508901e-03	ci right 1.075976e-02	k: 1012	n:100000
DOCK11   100000 perm   32 sec   (3114 perm/sec)   p_kst 1.012000e-02   p_cons 9.888400e-01   p_joint 7.431100e-01

Joint ci ratio: 1.562287e-03	ci left: 9.820514e-01	ci right 9.835957e-01	k: 108112	n:110000
Cons ci ratio: 1.253212e-03	ci left: 9.882539e-01	ci right 9.895019e-01	k: 108778	n:110000
KS ci ratio: 1.164815e-01	ci left: 9.596958e-03	ci right 1.079271e-02	k: 1120	n:110000
DOCK11   110000 perm   36 sec   (3072 perm/sec)   p_kst 1.018182e-02   p_cons 9.888909e-01   p_joint 9.828364e-01

Joint ci ratio: 6.673149e-03	ci left: 7.394894e-01	ci right 7.444489e-01	k: 89037	n:120000
Cons ci ratio: 1.197047e-03	ci left: 9.883339e-01	ci right 9.895257e-01	k: 118673	n:120000
KS ci ratio: 1.121220e-01	ci left: 9.517655e-03	ci right 1.065621e-02	k: 1209	n:120000
DOCK11   120000 perm   40 sec   (3029 perm/sec)   p_kst 1.007500e-02   p_cons 9.889417e-01   p_joint 7.419750e-01

Joint ci ratio: 2.090695e-02	ci left: 2.106313e-01	ci right 2.150892e-01	k: 27671	n:130000
Cons ci ratio: 1.140484e-03	ci left: 9.885443e-01	ci right 9.896798e-01	k: 128586	n:130000
KS ci ratio: 1.080081e-01	ci left: 9.488693e-03	ci right 1.057948e-02	k: 1303	n:130000
DOCK11   130000 perm   44 sec   (2988 perm/sec)   p_kst 1.002308e-02   p_cons 9.891231e-01   p_joint 2.128538e-01

Joint ci ratio: 2.014284e-02	ci left: 2.107723e-01	ci right 2.150682e-01	k: 29808	n:140000
Cons ci ratio: 1.099055e-03	ci left: 9.885642e-01	ci right 9.896582e-01	k: 138477	n:140000
KS ci ratio: 1.039413e-01	ci left: 9.534110e-03	ci right 1.058633e-02	k: 1407	n:140000
DOCK11   140000 perm   47 sec   (2949 perm/sec)   p_kst 1.005000e-02   p_cons 9.891214e-01   p_joint 2.129143e-01

Joint ci ratio: 1.946030e-02	ci left: 2.108373e-01	ci right 2.149872e-01	k: 31936	n:150000
Cons ci ratio: 1.064135e-03	ci left: 9.885343e-01	ci right 9.895933e-01	k: 148361	n:150000
KS ci ratio: 1.002683e-01	ci left: 9.580640e-03	ci right 1.059843e-02	k: 1512	n:150000
DOCK11   150000 perm   52 sec   (2909 perm/sec)   p_kst 1.008000e-02   p_cons 9.890733e-01   p_joint 2.129067e-01

Joint ci ratio: 1.884662e-02	ci left: 2.108278e-01	ci right 2.148451e-01	k: 34053	n:160000
Cons ci ratio: 1.027563e-03	ci left: 9.886111e-01	ci right 9.896335e-01	k: 158261	n:160000
KS ci ratio: 9.644850e-02	ci left: 9.725631e-03	ci right 1.071724e-02	k: 1634	n:160000
DOCK11   160000 perm   56 sec   (2874 perm/sec)   p_kst 1.021250e-02   p_cons 9.891313e-01   p_joint 2.128312e-01

Outputting figure to mutsig2_images.part000000000052/DOCK11.2_6434_160000_0.010212_0.98913_0.21283.png
                gene_name: DOCK11
               theta_stop: 0.096 
                    nperm: 160000 
                     p_ks: 0.010 
        ci_ks_bounds_left: 0.0097 
       ci_ks_bounds_right: 0.011 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 0.99 
                  p_joint: 0.21 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.21 

Current progress: 50 percent done.
DOCK5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.401905e-02	ci left: 4.324339e-01	ci right 4.519998e-01	k: 4422	n:10000
KS ci ratio: 4.851453e-02	ci left: 3.853009e-01	ci right 4.045604e-01	k: 3949	n:10000
DOCK5   10000 perm   2 sec   (4417 perm/sec)   p_kst 3.949000e-01   p_cons 4.422000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000052/DOCK5.2_5821_10000_0.3949_0.4422_1.png
                gene_name: DOCK5
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.39 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.40 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
DPH1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.324244e-02	ci left: 4.412128e-01	ci right 4.608157e-01	k: 4510	n:10000
Cons ci ratio: 8.211153e-02	ci left: 1.779240e-01	ci right 1.932596e-01	k: 1855	n:10000
KS ci ratio: 5.256318e-02	ci left: 3.479005e-01	ci right 3.667827e-01	k: 3573	n:10000
DPH1   10000 perm   2 sec   (6543 perm/sec)   p_kst 3.573000e-01   p_cons 1.855000e-01   p_joint 4.510000e-01

Outputting figure to mutsig2_images.part000000000052/DPH1.2_1380_10000_0.3573_0.1855_0.451.png
                gene_name: DPH1
               theta_stop: 0.082 
                    nperm: 10000 
                     p_ks: 0.36 
        ci_ks_bounds_left: 0.35 
       ci_ks_bounds_right: 0.37 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.45 
     ci_joint_bounds_left: 0.44 
    ci_joint_bounds_right: 0.46 

Current progress: 83 percent done.
DPYS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
Cons ci ratio: 1.803054e-02	ci left: 8.178151e-01	ci right 8.327949e-01	k: 8254	n:10000
KS ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
DPYS   10000 perm   2 sec   (6647 perm/sec)   p_kst 5.000000e-04   p_cons 8.254000e-01   p_joint 5.000000e-04

Joint ci ratio: 1.181570e+00	ci left: 2.397946e-04	ci right 9.193249e-04	k: 10	n:20000
Cons ci ratio: 1.294538e-02	ci left: 8.155650e-01	ci right 8.262415e-01	k: 16419	n:20000
KS ci ratio: 1.181570e+00	ci left: 2.397946e-04	ci right 9.193249e-04	k: 10	n:20000
DPYS   20000 perm   3 sec   (5789 perm/sec)   p_kst 5.000000e-04   p_cons 8.209500e-01   p_joint 5.000000e-04

Joint ci ratio: 9.504544e-01	ci left: 3.048758e-04	ci right 8.659558e-04	k: 16	n:30000
Cons ci ratio: 1.058711e-02	ci left: 8.160760e-01	ci right 8.247952e-01	k: 24614	n:30000
KS ci ratio: 9.504544e-01	ci left: 3.048758e-04	ci right 8.659558e-04	k: 16	n:30000
DPYS   30000 perm   6 sec   (5447 perm/sec)   p_kst 5.333333e-04   p_cons 8.204667e-01   p_joint 5.333333e-04

Joint ci ratio: 8.171313e-01	ci left: 3.447132e-04	ci right 8.325889e-04	k: 22	n:40000
Cons ci ratio: 9.180060e-03	ci left: 8.163002e-01	ci right 8.238533e-01	k: 32804	n:40000
KS ci ratio: 8.171313e-01	ci left: 3.447132e-04	ci right 8.325889e-04	k: 22	n:40000
DPYS   40000 perm   8 sec   (5234 perm/sec)   p_kst 5.500000e-04   p_cons 8.201000e-01   p_joint 5.500000e-04

Joint ci ratio: 7.685677e-01	ci left: 3.235989e-04	ci right 7.380108e-04	k: 25	n:50000
Cons ci ratio: 8.178017e-03	ci left: 8.178933e-01	ci right 8.246294e-01	k: 41064	n:50000
KS ci ratio: 7.685677e-01	ci left: 3.235989e-04	ci right 7.380108e-04	k: 25	n:50000
DPYS   50000 perm   10 sec   (5077 perm/sec)   p_kst 5.000000e-04   p_cons 8.212800e-01   p_joint 5.000000e-04

Joint ci ratio: 6.821911e-01	ci left: 3.648273e-04	ci right 7.528249e-04	k: 32	n:60000
Cons ci ratio: 7.464100e-03	ci left: 8.182443e-01	ci right 8.243912e-01	k: 49280	n:60000
KS ci ratio: 6.821911e-01	ci left: 3.648273e-04	ci right 7.528249e-04	k: 32	n:60000
DPYS   60000 perm   12 sec   (4944 perm/sec)   p_kst 5.333333e-04   p_cons 8.213333e-01   p_joint 5.333333e-04

Joint ci ratio: 6.531607e-01	ci left: 3.482923e-04	ci right 6.953110e-04	k: 35	n:70000
Cons ci ratio: 6.890663e-03	ci left: 8.193184e-01	ci right 8.249977e-01	k: 57552	n:70000
KS ci ratio: 6.531607e-01	ci left: 3.482923e-04	ci right 6.953110e-04	k: 35	n:70000
DPYS   70000 perm   15 sec   (4822 perm/sec)   p_kst 5.000000e-04   p_cons 8.221714e-01   p_joint 5.000000e-04

Joint ci ratio: 6.047066e-01	ci left: 3.678032e-04	ci right 6.952006e-04	k: 41	n:80000
Cons ci ratio: 6.455730e-03	ci left: 8.190423e-01	ci right 8.243594e-01	k: 65737	n:80000
KS ci ratio: 6.047066e-01	ci left: 3.678032e-04	ci right 6.952006e-04	k: 41	n:80000
DPYS   80000 perm   17 sec   (4685 perm/sec)   p_kst 5.125000e-04   p_cons 8.217125e-01   p_joint 5.125000e-04

Joint ci ratio: 5.716383e-01	ci left: 3.742211e-04	ci right 6.816924e-04	k: 46	n:90000
Cons ci ratio: 6.085389e-03	ci left: 8.192504e-01	ci right 8.242621e-01	k: 73959	n:90000
KS ci ratio: 5.716383e-01	ci left: 3.742211e-04	ci right 6.816924e-04	k: 46	n:90000
DPYS   90000 perm   20 sec   (4594 perm/sec)   p_kst 5.111111e-04   p_cons 8.217667e-01   p_joint 5.111111e-04

Joint ci ratio: 5.332977e-01	ci left: 3.970308e-04	ci right 6.931965e-04	k: 53	n:100000
Cons ci ratio: 5.782691e-03	ci left: 8.188911e-01	ci right 8.236502e-01	k: 82128	n:100000
KS ci ratio: 5.332977e-01	ci left: 3.970308e-04	ci right 6.931965e-04	k: 53	n:100000
DPYS   100000 perm   22 sec   (4506 perm/sec)   p_kst 5.300000e-04   p_cons 8.212800e-01   p_joint 5.300000e-04

Joint ci ratio: 5.145832e-01	ci left: 3.924887e-04	ci right 6.713132e-04	k: 57	n:110000
Cons ci ratio: 5.525320e-03	ci left: 8.183744e-01	ci right 8.229177e-01	k: 90272	n:110000
KS ci ratio: 5.145832e-01	ci left: 3.924887e-04	ci right 6.713132e-04	k: 57	n:110000
DPYS   110000 perm   25 sec   (4420 perm/sec)   p_kst 5.181818e-04   p_cons 8.206545e-01   p_joint 5.181818e-04

Joint ci ratio: 5.059412e-01	ci left: 3.742999e-04	ci right 6.341690e-04	k: 59	n:120000
Cons ci ratio: 5.279085e-03	ci left: 8.190870e-01	ci right 8.234308e-01	k: 98552	n:120000
KS ci ratio: 5.059412e-01	ci left: 3.742999e-04	ci right 6.341690e-04	k: 59	n:120000
DPYS   120000 perm   28 sec   (4337 perm/sec)   p_kst 4.916667e-04   p_cons 8.212667e-01   p_joint 4.916667e-04

Joint ci ratio: 4.898775e-01	ci left: 3.724112e-04	ci right 6.199916e-04	k: 63	n:130000
Cons ci ratio: 5.077647e-03	ci left: 8.188433e-01	ci right 8.230193e-01	k: 106722	n:130000
KS ci ratio: 4.898775e-01	ci left: 3.724112e-04	ci right 6.199916e-04	k: 63	n:130000
DPYS   130000 perm   31 sec   (4252 perm/sec)   p_kst 4.846154e-04   p_cons 8.209385e-01   p_joint 4.846154e-04

Joint ci ratio: 4.684108e-01	ci left: 3.834919e-04	ci right 6.237014e-04	k: 69	n:140000
Cons ci ratio: 4.893938e-03	ci left: 8.188597e-01	ci right 8.228841e-01	k: 114923	n:140000
KS ci ratio: 4.684108e-01	ci left: 3.834919e-04	ci right 6.237014e-04	k: 69	n:140000
DPYS   140000 perm   34 sec   (4175 perm/sec)   p_kst 4.928571e-04   p_cons 8.208786e-01   p_joint 4.928571e-04

Joint ci ratio: 4.525279e-01	ci left: 3.873920e-04	ci right 6.192958e-04	k: 74	n:150000
Cons ci ratio: 4.724753e-03	ci left: 8.191308e-01	ci right 8.230168e-01	k: 123162	n:150000
KS ci ratio: 4.525279e-01	ci left: 3.873920e-04	ci right 6.192958e-04	k: 74	n:150000
DPYS   150000 perm   37 sec   (4105 perm/sec)   p_kst 4.933333e-04   p_cons 8.210800e-01   p_joint 4.933333e-04

Joint ci ratio: 4.409242e-01	ci left: 3.853670e-04	ci right 6.083853e-04	k: 78	n:160000
Cons ci ratio: 4.574313e-03	ci left: 8.192194e-01	ci right 8.229815e-01	k: 131377	n:160000
KS ci ratio: 4.409242e-01	ci left: 3.853670e-04	ci right 6.083853e-04	k: 78	n:160000
DPYS   160000 perm   40 sec   (4022 perm/sec)   p_kst 4.875000e-04   p_cons 8.211063e-01   p_joint 4.875000e-04

Joint ci ratio: 4.301696e-01	ci left: 3.836474e-04	ci right 5.986923e-04	k: 82	n:170000
Cons ci ratio: 4.438895e-03	ci left: 8.191988e-01	ci right 8.228491e-01	k: 139575	n:170000
KS ci ratio: 4.301696e-01	ci left: 3.836474e-04	ci right 5.986923e-04	k: 82	n:170000
DPYS   170000 perm   43 sec   (3944 perm/sec)   p_kst 4.823529e-04   p_cons 8.210294e-01   p_joint 4.823529e-04

Joint ci ratio: 4.085827e-01	ci left: 4.070607e-04	ci right 6.206745e-04	k: 91	n:180000
Cons ci ratio: 4.310999e-03	ci left: 8.194442e-01	ci right 8.229899e-01	k: 147820	n:180000
KS ci ratio: 4.085827e-01	ci left: 4.070607e-04	ci right 6.206745e-04	k: 91	n:180000
DPYS   180000 perm   46 sec   (3881 perm/sec)   p_kst 5.055556e-04   p_cons 8.212222e-01   p_joint 5.055556e-04

Joint ci ratio: 3.958766e-01	ci left: 4.140213e-04	ci right 6.227638e-04	k: 97	n:190000
Cons ci ratio: 4.196410e-03	ci left: 8.194642e-01	ci right 8.229155e-01	k: 156027	n:190000
KS ci ratio: 3.958766e-01	ci left: 4.140213e-04	ci right 6.227638e-04	k: 97	n:190000
DPYS   190000 perm   50 sec   (3810 perm/sec)   p_kst 5.105263e-04   p_cons 8.211947e-01   p_joint 5.105263e-04

Joint ci ratio: 3.824514e-01	ci left: 4.248968e-04	ci right 6.300324e-04	k: 104	n:200000
Cons ci ratio: 4.090986e-03	ci left: 8.194483e-01	ci right 8.228124e-01	k: 164227	n:200000
KS ci ratio: 3.824514e-01	ci left: 4.248968e-04	ci right 6.300324e-04	k: 104	n:200000
DPYS   200000 perm   53 sec   (3750 perm/sec)   p_kst 5.200000e-04   p_cons 8.211350e-01   p_joint 5.200000e-04

Joint ci ratio: 3.592431e-01	ci left: 4.651248e-04	ci right 6.728747e-04	k: 118	n:210000
Cons ci ratio: 3.997010e-03	ci left: 8.191481e-01	ci right 8.224335e-01	k: 172367	n:210000
KS ci ratio: 3.592431e-01	ci left: 4.651248e-04	ci right 6.728747e-04	k: 118	n:210000
DPYS   210000 perm   57 sec   (3693 perm/sec)   p_kst 5.619048e-04   p_cons 8.207952e-01   p_joint 5.619048e-04

Joint ci ratio: 3.548009e-01	ci left: 4.563957e-04	ci right 6.571446e-04	k: 121	n:220000
Cons ci ratio: 3.904686e-03	ci left: 8.192183e-01	ci right 8.224278e-01	k: 180582	n:220000
KS ci ratio: 3.548009e-01	ci left: 4.563957e-04	ci right 6.571446e-04	k: 121	n:220000
DPYS   220000 perm   60 sec   (3638 perm/sec)   p_kst 5.500000e-04   p_cons 8.208273e-01   p_joint 5.500000e-04

Joint ci ratio: 3.505194e-01	ci left: 4.484402e-04	ci right 6.427680e-04	k: 124	n:230000
Cons ci ratio: 3.821075e-03	ci left: 8.190824e-01	ci right 8.222225e-01	k: 188751	n:230000
KS ci ratio: 3.505194e-01	ci left: 4.484402e-04	ci right 6.427680e-04	k: 124	n:230000
DPYS   230000 perm   64 sec   (3579 perm/sec)   p_kst 5.391304e-04   p_cons 8.206565e-01   p_joint 5.391304e-04

Joint ci ratio: 3.437129e-01	ci left: 4.487724e-04	ci right 6.386285e-04	k: 129	n:240000
Cons ci ratio: 3.742134e-03	ci left: 8.189963e-01	ci right 8.220710e-01	k: 196929	n:240000
KS ci ratio: 3.437129e-01	ci left: 4.487724e-04	ci right 6.386285e-04	k: 129	n:240000
DPYS   240000 perm   68 sec   (3526 perm/sec)   p_kst 5.375000e-04   p_cons 8.205375e-01   p_joint 5.375000e-04

Joint ci ratio: 3.372881e-01	ci left: 4.491116e-04	ci right 6.347870e-04	k: 134	n:250000
Cons ci ratio: 3.667790e-03	ci left: 8.189257e-01	ci right 8.219388e-01	k: 205109	n:250000
KS ci ratio: 3.372881e-01	ci left: 4.491116e-04	ci right 6.347870e-04	k: 134	n:250000
DPYS   250000 perm   72 sec   (3475 perm/sec)   p_kst 5.360000e-04   p_cons 8.204360e-01   p_joint 5.360000e-04

Joint ci ratio: 3.324005e-01	ci left: 4.459293e-04	ci right 6.270457e-04	k: 138	n:260000
Cons ci ratio: 3.598177e-03	ci left: 8.188226e-01	ci right 8.217780e-01	k: 213279	n:260000
KS ci ratio: 3.324005e-01	ci left: 4.459293e-04	ci right 6.270457e-04	k: 138	n:260000
DPYS   260000 perm   76 sec   (3418 perm/sec)   p_kst 5.307692e-04   p_cons 8.203038e-01   p_joint 5.307692e-04

Joint ci ratio: 3.265789e-01	ci left: 4.464003e-04	ci right 6.238667e-04	k: 143	n:270000
Cons ci ratio: 3.530296e-03	ci left: 8.189022e-01	ci right 8.218020e-01	k: 221496	n:270000
KS ci ratio: 3.265789e-01	ci left: 4.464003e-04	ci right 6.238667e-04	k: 143	n:270000
DPYS   270000 perm   80 sec   (3372 perm/sec)   p_kst 5.296296e-04   p_cons 8.203556e-01   p_joint 5.296296e-04

Joint ci ratio: 3.221363e-01	ci left: 4.435800e-04	ci right 6.170308e-04	k: 147	n:280000
Cons ci ratio: 3.463554e-03	ci left: 8.191952e-01	ci right 8.220410e-01	k: 229774	n:280000
KS ci ratio: 3.221363e-01	ci left: 4.435800e-04	ci right 6.170308e-04	k: 147	n:280000
DPYS   280000 perm   84 sec   (3323 perm/sec)   p_kst 5.250000e-04   p_cons 8.206214e-01   p_joint 5.250000e-04

Joint ci ratio: 3.127648e-01	ci left: 4.568471e-04	ci right 6.292516e-04	k: 156	n:290000
Cons ci ratio: 3.402405e-03	ci left: 8.192989e-01	ci right 8.220947e-01	k: 238003	n:290000
KS ci ratio: 3.127648e-01	ci left: 4.568471e-04	ci right 6.292516e-04	k: 156	n:290000
DPYS   290000 perm   88 sec   (3279 perm/sec)   p_kst 5.379310e-04   p_cons 8.207000e-01   p_joint 5.379310e-04

Joint ci ratio: 3.098200e-01	ci left: 4.508376e-04	ci right 6.190556e-04	k: 159	n:300000
Cons ci ratio: 3.346771e-03	ci left: 8.191855e-01	ci right 8.219350e-01	k: 246169	n:300000
KS ci ratio: 3.098200e-01	ci left: 4.508376e-04	ci right 6.190556e-04	k: 159	n:300000
DPYS   300000 perm   93 sec   (3237 perm/sec)   p_kst 5.300000e-04   p_cons 8.205633e-01   p_joint 5.300000e-04

Joint ci ratio: 3.041690e-01	ci left: 4.541587e-04	ci right 6.199269e-04	k: 165	n:310000
Cons ci ratio: 3.294318e-03	ci left: 8.190312e-01	ci right 8.217370e-01	k: 254320	n:310000
KS ci ratio: 3.041690e-01	ci left: 4.541587e-04	ci right 6.199269e-04	k: 165	n:310000
DPYS   310000 perm   97 sec   (3193 perm/sec)   p_kst 5.322581e-04   p_cons 8.203871e-01   p_joint 5.322581e-04

Joint ci ratio: 2.979510e-01	ci left: 4.601895e-04	ci right 6.240761e-04	k: 172	n:320000
Cons ci ratio: 3.242569e-03	ci left: 8.190405e-01	ci right 8.217037e-01	k: 262520	n:320000
KS ci ratio: 2.979510e-01	ci left: 4.601895e-04	ci right 6.240761e-04	k: 172	n:320000
DPYS   320000 perm   101 sec   (3153 perm/sec)   p_kst 5.375000e-04   p_cons 8.203750e-01   p_joint 5.375000e-04

Joint ci ratio: 2.896939e-01	ci left: 4.743150e-04	ci right 6.376937e-04	k: 182	n:330000
Cons ci ratio: 3.192757e-03	ci left: 8.190891e-01	ci right 8.217114e-01	k: 270733	n:330000
KS ci ratio: 2.896939e-01	ci left: 4.743150e-04	ci right 6.376937e-04	k: 182	n:330000
DPYS   330000 perm   106 sec   (3113 perm/sec)   p_kst 5.515152e-04   p_cons 8.204030e-01   p_joint 5.515152e-04

Joint ci ratio: 2.850584e-01	ci left: 4.767400e-04	ci right 6.378533e-04	k: 188	n:340000
Cons ci ratio: 3.146836e-03	ci left: 8.189787e-01	ci right 8.215629e-01	k: 278893	n:340000
KS ci ratio: 2.850584e-01	ci left: 4.767400e-04	ci right 6.378533e-04	k: 188	n:340000
DPYS   340000 perm   111 sec   (3074 perm/sec)   p_kst 5.529412e-04   p_cons 8.202735e-01   p_joint 5.529412e-04

Joint ci ratio: 2.799212e-01	ci left: 4.817023e-04	ci right 6.410418e-04	k: 195	n:350000
Cons ci ratio: 3.102509e-03	ci left: 8.189065e-01	ci right 8.214539e-01	k: 287064	n:350000
KS ci ratio: 2.799212e-01	ci left: 4.817023e-04	ci right 6.410418e-04	k: 195	n:350000
DPYS   350000 perm   115 sec   (3036 perm/sec)   p_kst 5.571429e-04   p_cons 8.201829e-01   p_joint 5.571429e-04

Joint ci ratio: 2.730408e-01	ci left: 4.941746e-04	ci right 6.529328e-04	k: 205	n:360000
Cons ci ratio: 3.059888e-03	ci left: 8.188497e-01	ci right 8.213618e-01	k: 295239	n:360000
KS ci ratio: 2.730408e-01	ci left: 4.941746e-04	ci right 6.529328e-04	k: 205	n:360000
DPYS   360000 perm   120 sec   (2997 perm/sec)   p_kst 5.694444e-04   p_cons 8.201083e-01   p_joint 5.694444e-04

Joint ci ratio: 2.685163e-01	ci left: 4.984534e-04	ci right 6.554859e-04	k: 212	n:370000
Cons ci ratio: 3.018617e-03	ci left: 8.188314e-01	ci right 8.213095e-01	k: 303427	n:370000
KS ci ratio: 2.685163e-01	ci left: 4.984534e-04	ci right 6.554859e-04	k: 212	n:370000
DPYS   370000 perm   125 sec   (2961 perm/sec)   p_kst 5.729730e-04   p_cons 8.200730e-01   p_joint 5.729730e-04

Joint ci ratio: 2.618385e-01	ci left: 5.123601e-04	ci right 6.691025e-04	k: 223	n:380000
Cons ci ratio: 2.979104e-03	ci left: 8.188011e-01	ci right 8.212466e-01	k: 311610	n:380000
KS ci ratio: 2.618385e-01	ci left: 5.123601e-04	ci right 6.691025e-04	k: 223	n:380000
DPYS   380000 perm   130 sec   (2924 perm/sec)   p_kst 5.868421e-04   p_cons 8.200263e-01   p_joint 5.868421e-04

Joint ci ratio: 2.572837e-01	ci left: 5.184013e-04	ci right 6.737901e-04	k: 231	n:390000
Cons ci ratio: 2.941767e-03	ci left: 8.187058e-01	ci right 8.211203e-01	k: 319767	n:390000
KS ci ratio: 2.572837e-01	ci left: 5.184013e-04	ci right 6.737901e-04	k: 231	n:390000
DPYS   390000 perm   135 sec   (2888 perm/sec)   p_kst 5.923077e-04   p_cons 8.199154e-01   p_joint 5.923077e-04

Joint ci ratio: 2.545556e-01	ci left: 5.171395e-04	ci right 6.702455e-04	k: 236	n:400000
Cons ci ratio: 2.905282e-03	ci left: 8.186680e-01	ci right 8.210524e-01	k: 327945	n:400000
KS ci ratio: 2.545556e-01	ci left: 5.171395e-04	ci right 6.702455e-04	k: 236	n:400000
DPYS   400000 perm   140 sec   (2856 perm/sec)   p_kst 5.900000e-04   p_cons 8.198625e-01   p_joint 5.900000e-04

Joint ci ratio: 2.519125e-01	ci left: 5.159475e-04	ci right 6.668656e-04	k: 241	n:410000
Cons ci ratio: 2.867800e-03	ci left: 8.188719e-01	ci right 8.212260e-01	k: 336221	n:410000
KS ci ratio: 2.519125e-01	ci left: 5.159475e-04	ci right 6.668656e-04	k: 241	n:410000
DPYS   410000 perm   145 sec   (2822 perm/sec)   p_kst 5.878049e-04   p_cons 8.200512e-01   p_joint 5.878049e-04

Joint ci ratio: 2.468624e-01	ci left: 5.259850e-04	ci right 6.762818e-04	k: 251	n:420000
Cons ci ratio: 2.834677e-03	ci left: 8.187583e-01	ci right 8.210849e-01	k: 344368	n:420000
KS ci ratio: 2.468624e-01	ci left: 5.259850e-04	ci right 6.762818e-04	k: 251	n:420000
DPYS   420000 perm   150 sec   (2791 perm/sec)   p_kst 5.976190e-04   p_cons 8.199238e-01   p_joint 5.976190e-04

Joint ci ratio: 2.444495e-01	ci left: 5.246649e-04	ci right 6.728966e-04	k: 256	n:430000
Cons ci ratio: 2.801416e-03	ci left: 8.187831e-01	ci right 8.210824e-01	k: 352572	n:430000
KS ci ratio: 2.444495e-01	ci left: 5.246649e-04	ci right 6.728966e-04	k: 256	n:430000
DPYS   430000 perm   156 sec   (2759 perm/sec)   p_kst 5.953488e-04   p_cons 8.199349e-01   p_joint 5.953488e-04

Joint ci ratio: 2.421060e-01	ci left: 5.234116e-04	ci right 6.696586e-04	k: 261	n:440000
Cons ci ratio: 2.779164e-03	ci left: 8.177521e-01	ci right 8.200301e-01	k: 360313	n:440000
KS ci ratio: 2.421060e-01	ci left: 5.234116e-04	ci right 6.696586e-04	k: 261	n:440000
DPYS   440000 perm   161 sec   (2726 perm/sec)   p_kst 5.931818e-04   p_cons 8.188932e-01   p_joint 5.931818e-04

Joint ci ratio: 2.380511e-01	ci left: 5.305775e-04	ci right 6.759777e-04	k: 270	n:450000
Cons ci ratio: 2.747842e-03	ci left: 8.177939e-01	ci right 8.200464e-01	k: 368515	n:450000
KS ci ratio: 2.380511e-01	ci left: 5.305775e-04	ci right 6.759777e-04	k: 270	n:450000
DPYS   450000 perm   167 sec   (2695 perm/sec)   p_kst 6.000000e-04   p_cons 8.189222e-01   p_joint 6.000000e-04

Joint ci ratio: 2.354588e-01	ci left: 5.313131e-04	ci right 6.750983e-04	k: 276	n:460000
Cons ci ratio: 2.717834e-03	ci left: 8.178036e-01	ci right 8.200315e-01	k: 376703	n:460000
KS ci ratio: 2.354588e-01	ci left: 5.313131e-04	ci right 6.750983e-04	k: 276	n:460000
DPYS   460000 perm   173 sec   (2666 perm/sec)   p_kst 6.000000e-04   p_cons 8.189196e-01   p_joint 6.000000e-04

Joint ci ratio: 2.341948e-01	ci left: 5.260158e-04	ci right 6.674926e-04	k: 279	n:470000
Cons ci ratio: 2.688402e-03	ci left: 8.178557e-01	ci right 8.200595e-01	k: 384911	n:470000
KS ci ratio: 2.341948e-01	ci left: 5.260158e-04	ci right 6.674926e-04	k: 279	n:470000
DPYS   470000 perm   178 sec   (2637 perm/sec)   p_kst 5.936170e-04   p_cons 8.189596e-01   p_joint 5.936170e-04

Joint ci ratio: 2.317252e-01	ci left: 5.268277e-04	ci right 6.668147e-04	k: 285	n:480000
Cons ci ratio: 2.661794e-03	ci left: 8.176948e-01	ci right 8.198763e-01	k: 393018	n:480000
KS ci ratio: 2.317252e-01	ci left: 5.268277e-04	ci right 6.668147e-04	k: 285	n:480000
DPYS   480000 perm   184 sec   (2610 perm/sec)   p_kst 5.937500e-04   p_cons 8.187875e-01   p_joint 5.937500e-04

Joint ci ratio: 2.273923e-01	ci left: 5.372346e-04	ci right 6.769434e-04	k: 296	n:490000
Cons ci ratio: 2.635071e-03	ci left: 8.176409e-01	ci right 8.198003e-01	k: 401174	n:490000
KS ci ratio: 2.273923e-01	ci left: 5.372346e-04	ci right 6.769434e-04	k: 296	n:490000
DPYS   490000 perm   190 sec   (2583 perm/sec)   p_kst 6.040816e-04   p_cons 8.187224e-01   p_joint 6.040816e-04

Joint ci ratio: 2.243899e-01	ci left: 5.415847e-04	ci right 6.803082e-04	k: 304	n:500000
Cons ci ratio: 2.607958e-03	ci left: 8.177235e-01	ci right 8.198608e-01	k: 409397	n:500000
KS ci ratio: 2.243899e-01	ci left: 5.415847e-04	ci right 6.803082e-04	k: 304	n:500000
DPYS   500000 perm   196 sec   (2555 perm/sec)   p_kst 6.080000e-04   p_cons 8.187940e-01   p_joint 6.080000e-04

Joint ci ratio: 2.215033e-01	ci left: 5.457759e-04	ci right 6.835294e-04	k: 312	n:510000
Cons ci ratio: 2.583439e-03	ci left: 8.175986e-01	ci right 8.197154e-01	k: 417516	n:510000
KS ci ratio: 2.215033e-01	ci left: 5.457759e-04	ci right 6.835294e-04	k: 312	n:510000
DPYS   510000 perm   202 sec   (2529 perm/sec)   p_kst 6.117647e-04   p_cons 8.186588e-01   p_joint 6.117647e-04

Joint ci ratio: 2.197552e-01	ci left: 5.443642e-04	ci right 6.805306e-04	k: 317	n:520000
Cons ci ratio: 2.557808e-03	ci left: 8.176867e-01	ci right 8.197828e-01	k: 425743	n:520000
KS ci ratio: 2.197552e-01	ci left: 5.443642e-04	ci right 6.805306e-04	k: 317	n:520000
DPYS   520000 perm   208 sec   (2503 perm/sec)   p_kst 6.096154e-04   p_cons 8.187365e-01   p_joint 6.096154e-04

Joint ci ratio: 2.177110e-01	ci left: 5.447938e-04	ci right 6.796304e-04	k: 323	n:530000
Cons ci ratio: 2.534761e-03	ci left: 8.175561e-01	ci right 8.196329e-01	k: 433856	n:530000
KS ci ratio: 2.177110e-01	ci left: 5.447938e-04	ci right 6.796304e-04	k: 323	n:530000
DPYS   530000 perm   214 sec   (2477 perm/sec)   p_kst 6.094340e-04   p_cons 8.185962e-01   p_joint 6.094340e-04

Joint ci ratio: 2.147482e-01	ci left: 5.504693e-04	ci right 6.846122e-04	k: 332	n:540000
Cons ci ratio: 2.511102e-03	ci left: 8.175751e-01	ci right 8.196326e-01	k: 442047	n:540000
KS ci ratio: 2.147482e-01	ci left: 5.504693e-04	ci right 6.846122e-04	k: 332	n:540000
DPYS   540000 perm   220 sec   (2451 perm/sec)   p_kst 6.148148e-04   p_cons 8.186056e-01   p_joint 6.148148e-04

Joint ci ratio: 2.131542e-01	ci left: 5.490645e-04	ci right 6.817421e-04	k: 337	n:550000
Cons ci ratio: 2.487302e-03	ci left: 8.176883e-01	ci right 8.197265e-01	k: 450290	n:550000
KS ci ratio: 2.131542e-01	ci left: 5.490645e-04	ci right 6.817421e-04	k: 337	n:550000
DPYS   550000 perm   227 sec   (2425 perm/sec)   p_kst 6.127273e-04   p_cons 8.187091e-01   p_joint 6.127273e-04

Joint ci ratio: 2.106752e-01	ci left: 5.527875e-04	ci right 6.846107e-04	k: 345	n:560000
Cons ci ratio: 2.464624e-03	ci left: 8.177421e-01	ci right 8.197618e-01	k: 458502	n:560000
KS ci ratio: 2.106752e-01	ci left: 5.527875e-04	ci right 6.846107e-04	k: 345	n:560000
DPYS   560000 perm   233 sec   (2400 perm/sec)   p_kst 6.160714e-04   p_cons 8.187536e-01   p_joint 6.160714e-04

Joint ci ratio: 2.088720e-01	ci left: 5.530629e-04	ci right 6.836785e-04	k: 351	n:570000
Cons ci ratio: 2.442714e-03	ci left: 8.177747e-01	ci right 8.197764e-01	k: 466703	n:570000
KS ci ratio: 2.088720e-01	ci left: 5.530629e-04	ci right 6.836785e-04	k: 351	n:570000
DPYS   570000 perm   240 sec   (2376 perm/sec)   p_kst 6.157895e-04   p_cons 8.187772e-01   p_joint 6.157895e-04

Joint ci ratio: 2.065378e-01	ci left: 5.566031e-04	ci right 6.864003e-04	k: 359	n:580000
Cons ci ratio: 2.421224e-03	ci left: 8.178253e-01	ci right 8.198095e-01	k: 474915	n:580000
KS ci ratio: 2.065378e-01	ci left: 5.566031e-04	ci right 6.864003e-04	k: 359	n:580000
DPYS   580000 perm   246 sec   (2353 perm/sec)   p_kst 6.189655e-04   p_cons 8.188190e-01   p_joint 6.189655e-04

Joint ci ratio: 2.056832e-01	ci left: 5.519913e-04	ci right 6.801134e-04	k: 362	n:590000
Cons ci ratio: 2.400949e-03	ci left: 8.177927e-01	ci right 8.197601e-01	k: 483079	n:590000
KS ci ratio: 2.056832e-01	ci left: 5.519913e-04	ci right 6.801134e-04	k: 362	n:590000
DPYS   590000 perm   253 sec   (2331 perm/sec)   p_kst 6.135593e-04   p_cons 8.187780e-01   p_joint 6.135593e-04

Joint ci ratio: 2.026350e-01	ci left: 5.601879e-04	ci right 6.880471e-04	k: 373	n:600000
Cons ci ratio: 2.379677e-03	ci left: 8.179483e-01	ci right 8.198987e-01	k: 491355	n:600000
KS ci ratio: 2.026350e-01	ci left: 5.601879e-04	ci right 6.880471e-04	k: 373	n:600000
DPYS   600000 perm   260 sec   (2308 perm/sec)   p_kst 6.216667e-04   p_cons 8.189250e-01   p_joint 6.216667e-04

Joint ci ratio: 2.015604e-01	ci left: 5.572299e-04	ci right 6.836566e-04	k: 377	n:610000
Cons ci ratio: 2.361008e-03	ci left: 8.178409e-01	ci right 8.197757e-01	k: 499474	n:610000
KS ci ratio: 2.015604e-01	ci left: 5.572299e-04	ci right 6.836566e-04	k: 377	n:610000
DPYS   610000 perm   267 sec   (2286 perm/sec)   p_kst 6.180328e-04   p_cons 8.188098e-01   p_joint 6.180328e-04

Joint ci ratio: 1.994605e-01	ci left: 5.604979e-04	ci right 6.861799e-04	k: 385	n:620000
Cons ci ratio: 2.341675e-03	ci left: 8.178761e-01	ci right 8.197951e-01	k: 507679	n:620000
KS ci ratio: 1.994605e-01	ci left: 5.604979e-04	ci right 6.861799e-04	k: 385	n:620000
DPYS   620000 perm   274 sec   (2264 perm/sec)   p_kst 6.209677e-04   p_cons 8.188371e-01   p_joint 6.209677e-04

Joint ci ratio: 1.974248e-01	ci left: 5.636687e-04	ci right 6.886166e-04	k: 393	n:630000
Cons ci ratio: 2.322983e-03	ci left: 8.178880e-01	ci right 8.197917e-01	k: 515870	n:630000
KS ci ratio: 1.974248e-01	ci left: 5.636687e-04	ci right 6.886166e-04	k: 393	n:630000
DPYS   630000 perm   281 sec   (2241 perm/sec)   p_kst 6.238095e-04   p_cons 8.188413e-01   p_joint 6.238095e-04

Joint ci ratio: 1.961841e-01	ci left: 5.622889e-04	ci right 6.860540e-04	k: 398	n:640000
Cons ci ratio: 2.303991e-03	ci left: 8.179950e-01	ci right 8.198834e-01	k: 524122	n:640000
KS ci ratio: 1.961841e-01	ci left: 5.622889e-04	ci right 6.860540e-04	k: 398	n:640000
DPYS   640000 perm   288 sec   (2219 perm/sec)   p_kst 6.218750e-04   p_cons 8.189406e-01   p_joint 6.218750e-04

Joint ci ratio: 1.949665e-01	ci left: 5.609539e-04	ci right 6.835678e-04	k: 403	n:650000
Cons ci ratio: 2.285552e-03	ci left: 8.180865e-01	ci right 8.199599e-01	k: 532366	n:650000
KS ci ratio: 1.949665e-01	ci left: 5.609539e-04	ci right 6.835678e-04	k: 403	n:650000
DPYS   650000 perm   296 sec   (2199 perm/sec)   p_kst 6.200000e-04   p_cons 8.190246e-01   p_joint 6.200000e-04

Joint ci ratio: 1.930641e-01	ci left: 5.639871e-04	ci right 6.859199e-04	k: 411	n:660000
Cons ci ratio: 2.267351e-03	ci left: 8.182010e-01	ci right 8.200598e-01	k: 540627	n:660000
KS ci ratio: 1.930641e-01	ci left: 5.639871e-04	ci right 6.859199e-04	k: 411	n:660000
DPYS   660000 perm   303 sec   (2179 perm/sec)   p_kst 6.227273e-04   p_cons 8.191318e-01   p_joint 6.227273e-04

Joint ci ratio: 1.919033e-01	ci left: 5.626724e-04	ci right 6.835042e-04	k: 416	n:670000
Cons ci ratio: 2.250540e-03	ci left: 8.181851e-01	ci right 8.200300e-01	k: 548803	n:670000
KS ci ratio: 1.919033e-01	ci left: 5.626724e-04	ci right 6.835042e-04	k: 416	n:670000
DPYS   670000 perm   310 sec   (2159 perm/sec)   p_kst 6.208955e-04   p_cons 8.191090e-01   p_joint 6.208955e-04

Joint ci ratio: 1.909898e-01	ci left: 5.599982e-04	ci right 6.796167e-04	k: 420	n:680000
Cons ci ratio: 2.233522e-03	ci left: 8.182463e-01	ci right 8.200774e-01	k: 557031	n:680000
KS ci ratio: 1.909898e-01	ci left: 5.599982e-04	ci right 6.796167e-04	k: 420	n:680000
DPYS   680000 perm   318 sec   (2140 perm/sec)   p_kst 6.176471e-04   p_cons 8.191632e-01   p_joint 6.176471e-04

Joint ci ratio: 1.894214e-01	ci left: 5.615442e-04	ci right 6.803946e-04	k: 427	n:690000
Cons ci ratio: 2.216840e-03	ci left: 8.183117e-01	ci right 8.201291e-01	k: 565263	n:690000
KS ci ratio: 1.894214e-01	ci left: 5.615442e-04	ci right 6.803946e-04	k: 427	n:690000
DPYS   690000 perm   325 sec   (2121 perm/sec)   p_kst 6.188406e-04   p_cons 8.192217e-01   p_joint 6.188406e-04

Joint ci ratio: 1.870326e-01	ci left: 5.684962e-04	ci right 6.871283e-04	k: 438	n:700000
Cons ci ratio: 2.200420e-03	ci left: 8.183894e-01	ci right 8.201936e-01	k: 573505	n:700000
KS ci ratio: 1.870326e-01	ci left: 5.684962e-04	ci right 6.871283e-04	k: 438	n:700000
DPYS   700000 perm   333 sec   (2102 perm/sec)   p_kst 6.257143e-04   p_cons 8.192929e-01   p_joint 6.257143e-04

Joint ci ratio: 1.851440e-01	ci left: 5.725748e-04	ci right 6.907162e-04	k: 447	n:710000
Cons ci ratio: 2.185024e-03	ci left: 8.183748e-01	ci right 8.201663e-01	k: 581683	n:710000
KS ci ratio: 1.851440e-01	ci left: 5.725748e-04	ci right 6.907162e-04	k: 447	n:710000
DPYS   710000 perm   341 sec   (2084 perm/sec)   p_kst 6.295775e-04   p_cons 8.192718e-01   p_joint 6.295775e-04

Joint ci ratio: 1.837142e-01	ci left: 5.738958e-04	ci right 6.912934e-04	k: 454	n:720000
Cons ci ratio: 2.169458e-03	ci left: 8.184274e-01	ci right 8.202062e-01	k: 589909	n:720000
KS ci ratio: 1.837142e-01	ci left: 5.738958e-04	ci right 6.912934e-04	k: 454	n:720000
DPYS   720000 perm   348 sec   (2067 perm/sec)   p_kst 6.305556e-04   p_cons 8.193181e-01   p_joint 6.305556e-04

Joint ci ratio: 1.825148e-01	ci left: 5.738767e-04	ci right 6.904192e-04	k: 460	n:730000
Cons ci ratio: 2.155008e-03	ci left: 8.183701e-01	ci right 8.201369e-01	k: 598056	n:730000
KS ci ratio: 1.825148e-01	ci left: 5.738767e-04	ci right 6.904192e-04	k: 460	n:730000
DPYS   730000 perm   356 sec   (2050 perm/sec)   p_kst 6.301370e-04   p_cons 8.192548e-01   p_joint 6.301370e-04

Joint ci ratio: 1.809513e-01	ci left: 5.764407e-04	ci right 6.923912e-04	k: 468	n:740000
Cons ci ratio: 2.140989e-03	ci left: 8.182941e-01	ci right 8.200493e-01	k: 606188	n:740000
KS ci ratio: 1.809513e-01	ci left: 5.764407e-04	ci right 6.923912e-04	k: 468	n:740000
DPYS   740000 perm   364 sec   (2032 perm/sec)   p_kst 6.324324e-04   p_cons 8.191730e-01   p_joint 6.324324e-04

Joint ci ratio: 1.796158e-01	ci left: 5.776670e-04	ci right 6.929133e-04	k: 475	n:750000
Cons ci ratio: 2.126675e-03	ci left: 8.182991e-01	ci right 8.200425e-01	k: 614379	n:750000
KS ci ratio: 1.796158e-01	ci left: 5.776670e-04	ci right 6.929133e-04	k: 475	n:750000
DPYS   750000 perm   372 sec   (2015 perm/sec)   p_kst 6.333333e-04   p_cons 8.191720e-01   p_joint 6.333333e-04

Joint ci ratio: 1.788661e-01	ci left: 5.750931e-04	ci right 6.892952e-04	k: 479	n:760000
Cons ci ratio: 2.113066e-03	ci left: 8.182446e-01	ci right 8.199767e-01	k: 622525	n:760000
KS ci ratio: 1.788661e-01	ci left: 5.750931e-04	ci right 6.892952e-04	k: 479	n:760000
DPYS   760000 perm   380 sec   (1998 perm/sec)   p_kst 6.302632e-04   p_cons 8.191118e-01   p_joint 6.302632e-04

Joint ci ratio: 1.773937e-01	ci left: 5.775508e-04	ci right 6.911956e-04	k: 487	n:770000
Cons ci ratio: 2.099743e-03	ci left: 8.181876e-01	ci right 8.199087e-01	k: 630668	n:770000
KS ci ratio: 1.773937e-01	ci left: 5.775508e-04	ci right 6.911956e-04	k: 487	n:770000
DPYS   770000 perm   389 sec   (1982 perm/sec)   p_kst 6.324675e-04   p_cons 8.190494e-01   p_joint 6.324675e-04

Joint ci ratio: 1.761349e-01	ci left: 5.787236e-04	ci right 6.917051e-04	k: 494	n:780000
Cons ci ratio: 2.085775e-03	ci left: 8.182593e-01	ci right 8.199691e-01	k: 638910	n:780000
KS ci ratio: 1.761349e-01	ci left: 5.787236e-04	ci right 6.917051e-04	k: 494	n:780000
DPYS   780000 perm   397 sec   (1965 perm/sec)   p_kst 6.333333e-04   p_cons 8.191154e-01   p_joint 6.333333e-04

Joint ci ratio: 1.749025e-01	ci left: 5.798695e-04	ci right 6.921989e-04	k: 501	n:790000
Cons ci ratio: 2.072852e-03	ci left: 8.182189e-01	ci right 8.199180e-01	k: 647065	n:790000
KS ci ratio: 1.749025e-01	ci left: 5.798695e-04	ci right 6.921989e-04	k: 501	n:790000
DPYS   790000 perm   405 sec   (1950 perm/sec)   p_kst 6.341772e-04   p_cons 8.190696e-01   p_joint 6.341772e-04

Joint ci ratio: 1.738665e-01	ci left: 5.797938e-04	ci right 6.913735e-04	k: 507	n:800000
Cons ci ratio: 2.060140e-03	ci left: 8.181833e-01	ci right 8.198719e-01	k: 655223	n:800000
KS ci ratio: 1.738665e-01	ci left: 5.797938e-04	ci right 6.913735e-04	k: 507	n:800000
DPYS   800000 perm   414 sec   (1934 perm/sec)   p_kst 6.337500e-04   p_cons 8.190287e-01   p_joint 6.337500e-04

Joint ci ratio: 1.731863e-01	ci left: 5.773596e-04	ci right 6.879906e-04	k: 511	n:810000
Cons ci ratio: 2.047607e-03	ci left: 8.181561e-01	ci right 8.198342e-01	k: 663387	n:810000
KS ci ratio: 1.731863e-01	ci left: 5.773596e-04	ci right 6.879906e-04	k: 511	n:810000
DPYS   810000 perm   422 sec   (1918 perm/sec)   p_kst 6.308642e-04   p_cons 8.189963e-01   p_joint 6.308642e-04

Joint ci ratio: 1.716836e-01	ci left: 5.808206e-04	ci right 6.910492e-04	k: 520	n:820000
Cons ci ratio: 2.035418e-03	ci left: 8.181124e-01	ci right 8.197805e-01	k: 671537	n:820000
KS ci ratio: 1.716836e-01	ci left: 5.808206e-04	ci right 6.910492e-04	k: 520	n:820000
DPYS   820000 perm   431 sec   (1904 perm/sec)   p_kst 6.341463e-04   p_cons 8.189476e-01   p_joint 6.341463e-04

Joint ci ratio: 1.707036e-01	ci left: 5.807420e-04	ci right 6.902617e-04	k: 526	n:830000
Cons ci ratio: 2.022647e-03	ci left: 8.181869e-01	ci right 8.198446e-01	k: 679784	n:830000
KS ci ratio: 1.707036e-01	ci left: 5.807420e-04	ci right 6.902617e-04	k: 526	n:830000
DPYS   830000 perm   439 sec   (1889 perm/sec)   p_kst 6.337349e-04   p_cons 8.190169e-01   p_joint 6.337349e-04

Joint ci ratio: 1.687921e-01	ci left: 5.875074e-04	ci right 6.969361e-04	k: 538	n:840000
Cons ci ratio: 2.010871e-03	ci left: 8.181475e-01	ci right 8.197955e-01	k: 687937	n:840000
KS ci ratio: 1.687921e-01	ci left: 5.875074e-04	ci right 6.969361e-04	k: 538	n:840000
DPYS   840000 perm   448 sec   (1874 perm/sec)   p_kst 6.404762e-04   p_cons 8.189726e-01   p_joint 6.404762e-04

Joint ci ratio: 1.677065e-01	ci left: 5.884841e-04	ci right 6.973186e-04	k: 545	n:850000
Cons ci ratio: 1.999449e-03	ci left: 8.180867e-01	ci right 8.197252e-01	k: 696071	n:850000
KS ci ratio: 1.677065e-01	ci left: 5.884841e-04	ci right 6.973186e-04	k: 545	n:850000
DPYS   850000 perm   457 sec   (1859 perm/sec)   p_kst 6.411765e-04   p_cons 8.189071e-01   p_joint 6.411765e-04

Joint ci ratio: 1.669440e-01	ci left: 5.872117e-04	ci right 6.952675e-04	k: 550	n:860000
Cons ci ratio: 1.987518e-03	ci left: 8.181322e-01	ci right 8.197610e-01	k: 704295	n:860000
KS ci ratio: 1.669440e-01	ci left: 5.872117e-04	ci right 6.952675e-04	k: 550	n:860000
DPYS   860000 perm   466 sec   (1844 perm/sec)   p_kst 6.395349e-04   p_cons 8.189477e-01   p_joint 6.395349e-04

Joint ci ratio: 1.657450e-01	ci left: 5.892748e-04	ci right 6.968537e-04	k: 558	n:870000
Cons ci ratio: 1.976143e-03	ci left: 8.181248e-01	ci right 8.197443e-01	k: 712474	n:870000
KS ci ratio: 1.657450e-01	ci left: 5.892748e-04	ci right 6.968537e-04	k: 558	n:870000
DPYS   870000 perm   475 sec   (1830 perm/sec)   p_kst 6.413793e-04   p_cons 8.189356e-01   p_joint 6.413793e-04

Joint ci ratio: 1.650088e-01	ci left: 5.880251e-04	ci right 6.948517e-04	k: 563	n:880000
Cons ci ratio: 1.964795e-03	ci left: 8.181427e-01	ci right 8.197529e-01	k: 720675	n:880000
KS ci ratio: 1.650088e-01	ci left: 5.880251e-04	ci right 6.948517e-04	k: 563	n:880000
DPYS   880000 perm   484 sec   (1817 perm/sec)   p_kst 6.397727e-04   p_cons 8.189489e-01   p_joint 6.397727e-04

Joint ci ratio: 1.639942e-01	ci left: 5.889595e-04	ci right 6.952330e-04	k: 570	n:890000
Cons ci ratio: 1.954114e-03	ci left: 8.180882e-01	ci right 8.196895e-01	k: 728812	n:890000
KS ci ratio: 1.639942e-01	ci left: 5.889595e-04	ci right 6.952330e-04	k: 570	n:890000
DPYS   890000 perm   493 sec   (1804 perm/sec)   p_kst 6.404494e-04   p_cons 8.188899e-01   p_joint 6.404494e-04

Joint ci ratio: 1.628571e-01	ci left: 5.909409e-04	ci right 6.967603e-04	k: 578	n:900000
Cons ci ratio: 1.943205e-03	ci left: 8.180961e-01	ci right 8.196885e-01	k: 737004	n:900000
KS ci ratio: 1.628571e-01	ci left: 5.909409e-04	ci right 6.967603e-04	k: 578	n:900000
DPYS   900000 perm   503 sec   (1790 perm/sec)   p_kst 6.422222e-04   p_cons 8.188933e-01   p_joint 6.422222e-04

Joint ci ratio: 1.620199e-01	ci left: 5.907724e-04	ci right 6.959648e-04	k: 584	n:910000
Cons ci ratio: 1.932441e-03	ci left: 8.181094e-01	ci right 8.196930e-01	k: 745201	n:910000
KS ci ratio: 1.620199e-01	ci left: 5.907724e-04	ci right 6.959648e-04	k: 584	n:910000
DPYS   910000 perm   512 sec   (1777 perm/sec)   p_kst 6.417582e-04   p_cons 8.189022e-01   p_joint 6.417582e-04

Joint ci ratio: 1.611954e-01	ci left: 5.906090e-04	ci right 6.951852e-04	k: 590	n:920000
Cons ci ratio: 1.922058e-03	ci left: 8.180908e-01	ci right 8.196658e-01	k: 753369	n:920000
KS ci ratio: 1.611954e-01	ci left: 5.906090e-04	ci right 6.951852e-04	k: 590	n:920000
DPYS   920000 perm   521 sec   (1765 perm/sec)   p_kst 6.413043e-04   p_cons 8.188793e-01   p_joint 6.413043e-04

Joint ci ratio: 1.602491e-01	ci left: 5.914825e-04	ci right 6.955395e-04	k: 597	n:930000
Cons ci ratio: 1.911563e-03	ci left: 8.181158e-01	ci right 8.196822e-01	k: 761577	n:930000
KS ci ratio: 1.602491e-01	ci left: 5.914825e-04	ci right 6.955395e-04	k: 597	n:930000
DPYS   930000 perm   531 sec   (1752 perm/sec)   p_kst 6.419355e-04   p_cons 8.189000e-01   p_joint 6.419355e-04

Joint ci ratio: 1.595834e-01	ci left: 5.902964e-04	ci right 6.936720e-04	k: 602	n:940000
Cons ci ratio: 1.900986e-03	ci left: 8.181797e-01	ci right 8.197375e-01	k: 769822	n:940000
KS ci ratio: 1.595834e-01	ci left: 5.902964e-04	ci right 6.936720e-04	k: 602	n:940000
DPYS   940000 perm   540 sec   (1740 perm/sec)   p_kst 6.404255e-04   p_cons 8.189596e-01   p_joint 6.404255e-04

Joint ci ratio: 1.584055e-01	ci left: 5.931796e-04	ci right 6.962204e-04	k: 611	n:950000
Cons ci ratio: 1.890845e-03	ci left: 8.182011e-01	ci right 8.197507e-01	k: 778028	n:950000
KS ci ratio: 1.584055e-01	ci left: 5.931796e-04	ci right 6.962204e-04	k: 611	n:950000
DPYS   950000 perm   550 sec   (1727 perm/sec)   p_kst 6.431579e-04   p_cons 8.189768e-01   p_joint 6.431579e-04

Joint ci ratio: 1.570004e-01	ci left: 5.980069e-04	ci right 7.008781e-04	k: 622	n:960000
Cons ci ratio: 1.880870e-03	ci left: 8.182210e-01	ci right 8.197625e-01	k: 786233	n:960000
KS ci ratio: 1.570004e-01	ci left: 5.980069e-04	ci right 7.008781e-04	k: 622	n:960000
DPYS   960000 perm   560 sec   (1715 perm/sec)   p_kst 6.479167e-04   p_cons 8.189927e-01   p_joint 6.479167e-04

Joint ci ratio: 1.564990e-01	ci left: 5.958038e-04	ci right 6.979379e-04	k: 626	n:970000
Cons ci ratio: 1.870427e-03	ci left: 8.183397e-01	ci right 8.198728e-01	k: 794534	n:970000
KS ci ratio: 1.564990e-01	ci left: 5.958038e-04	ci right 6.979379e-04	k: 626	n:970000
DPYS   970000 perm   570 sec   (1703 perm/sec)   p_kst 6.453608e-04   p_cons 8.191072e-01   p_joint 6.453608e-04

Joint ci ratio: 1.556326e-01	ci left: 5.965881e-04	ci right 6.982377e-04	k: 633	n:980000
Cons ci ratio: 1.860950e-03	ci left: 8.183293e-01	ci right 8.198546e-01	k: 802711	n:980000
KS ci ratio: 1.556326e-01	ci left: 5.965881e-04	ci right 6.982377e-04	k: 633	n:980000
DPYS   980000 perm   580 sec   (1691 perm/sec)   p_kst 6.459184e-04   p_cons 8.190929e-01   p_joint 6.459184e-04

Joint ci ratio: 1.544193e-01	ci left: 6.002712e-04	ci right 7.016772e-04	k: 643	n:990000
Cons ci ratio: 1.851577e-03	ci left: 8.183251e-01	ci right 8.198427e-01	k: 810894	n:990000
KS ci ratio: 1.544193e-01	ci left: 6.002712e-04	ci right 7.016772e-04	k: 643	n:990000
DPYS   990000 perm   589 sec   (1680 perm/sec)   p_kst 6.494949e-04   p_cons 8.190848e-01   p_joint 6.494949e-04

Joint ci ratio: 1.539422e-01	ci left: 5.981141e-04	ci right 6.988147e-04	k: 647	n:1000000
Cons ci ratio: 1.842637e-03	ci left: 8.182740e-01	ci right 8.197841e-01	k: 819030	n:1000000
KS ci ratio: 1.539422e-01	ci left: 5.981141e-04	ci right 6.988147e-04	k: 647	n:1000000
DPYS   1000000 perm   600 sec   (1667 perm/sec)   p_kst 6.470000e-04   p_cons 8.190300e-01   p_joint 6.470000e-04

Joint ci ratio: 1.535873e-01	ci left: 5.950481e-04	ci right 6.949803e-04	k: 650	n:1010000
Cons ci ratio: 1.833414e-03	ci left: 8.182904e-01	ci right 8.197930e-01	k: 827233	n:1010000
KS ci ratio: 1.535873e-01	ci left: 5.950481e-04	ci right 6.949803e-04	k: 650	n:1010000
DPYS   1010000 perm   610 sec   (1656 perm/sec)   p_kst 6.435644e-04   p_cons 8.190426e-01   p_joint 6.435644e-04

Joint ci ratio: 1.527681e-01	ci left: 5.958140e-04	ci right 6.952924e-04	k: 657	n:1020000
Cons ci ratio: 1.824323e-03	ci left: 8.183074e-01	ci right 8.198026e-01	k: 835437	n:1020000
KS ci ratio: 1.527681e-01	ci left: 5.958140e-04	ci right 6.952924e-04	k: 657	n:1020000
DPYS   1020000 perm   620 sec   (1644 perm/sec)   p_kst 6.441176e-04   p_cons 8.190559e-01   p_joint 6.441176e-04

Joint ci ratio: 1.519619e-01	ci left: 5.965665e-04	ci right 6.955970e-04	k: 664	n:1030000
Cons ci ratio: 1.815276e-03	ci left: 8.183387e-01	ci right 8.198265e-01	k: 843656	n:1030000
KS ci ratio: 1.519619e-01	ci left: 5.965665e-04	ci right 6.955970e-04	k: 664	n:1030000
DPYS   1030000 perm   631 sec   (1633 perm/sec)   p_kst 6.446602e-04   p_cons 8.190835e-01   p_joint 6.446602e-04

Joint ci ratio: 1.507202e-01	ci left: 6.010068e-04	ci right 6.998856e-04	k: 675	n:1040000
Cons ci ratio: 1.806738e-03	ci left: 8.183078e-01	ci right 8.197885e-01	k: 851811	n:1040000
KS ci ratio: 1.507202e-01	ci left: 6.010068e-04	ci right 6.998856e-04	k: 675	n:1040000
DPYS   1040000 perm   641 sec   (1623 perm/sec)   p_kst 6.490385e-04   p_cons 8.190490e-01   p_joint 6.490385e-04

Joint ci ratio: 1.502764e-01	ci left: 5.989489e-04	ci right 6.971729e-04	k: 679	n:1050000
Cons ci ratio: 1.798053e-03	ci left: 8.183213e-01	ci right 8.197950e-01	k: 860012	n:1050000
KS ci ratio: 1.502764e-01	ci left: 5.989489e-04	ci right 6.971729e-04	k: 679	n:1050000
DPYS   1050000 perm   651 sec   (1612 perm/sec)   p_kst 6.466667e-04   p_cons 8.190590e-01   p_joint 6.466667e-04

Joint ci ratio: 1.495088e-01	ci left: 5.996546e-04	ci right 6.974471e-04	k: 686	n:1060000
Cons ci ratio: 1.789749e-03	ci left: 8.182922e-01	ci right 8.197589e-01	k: 868168	n:1060000
KS ci ratio: 1.495088e-01	ci left: 5.996546e-04	ci right 6.974471e-04	k: 686	n:1060000
DPYS   1060000 perm   662 sec   (1601 perm/sec)   p_kst 6.471698e-04   p_cons 8.190264e-01   p_joint 6.471698e-04

Joint ci ratio: 1.489678e-01	ci left: 5.985487e-04	ci right 6.957762e-04	k: 691	n:1070000
Cons ci ratio: 1.781362e-03	ci left: 8.182963e-01	ci right 8.197562e-01	k: 876359	n:1070000
KS ci ratio: 1.489678e-01	ci left: 5.985487e-04	ci right 6.957762e-04	k: 691	n:1070000
DPYS   1070000 perm   673 sec   (1590 perm/sec)   p_kst 6.457944e-04   p_cons 8.190271e-01   p_joint 6.457944e-04

Joint ci ratio: 1.485393e-01	ci left: 5.965724e-04	ci right 6.931753e-04	k: 695	n:1080000
Cons ci ratio: 1.772765e-03	ci left: 8.183551e-01	ci right 8.198080e-01	k: 884609	n:1080000
KS ci ratio: 1.485393e-01	ci left: 5.965724e-04	ci right 6.931753e-04	k: 695	n:1080000
DPYS   1080000 perm   684 sec   (1580 perm/sec)   p_kst 6.435185e-04   p_cons 8.190824e-01   p_joint 6.435185e-04

Joint ci ratio: 1.479031e-01	ci left: 5.963997e-04	ci right 6.925245e-04	k: 701	n:1090000
Cons ci ratio: 1.764837e-03	ci left: 8.183209e-01	ci right 8.197673e-01	k: 892759	n:1090000
KS ci ratio: 1.479031e-01	ci left: 5.963997e-04	ci right 6.925245e-04	k: 701	n:1090000
DPYS   1090000 perm   695 sec   (1569 perm/sec)   p_kst 6.431193e-04   p_cons 8.190450e-01   p_joint 6.431193e-04

Joint ci ratio: 1.472751e-01	ci left: 5.962310e-04	ci right 6.918847e-04	k: 707	n:1100000
Cons ci ratio: 1.756697e-03	ci left: 8.183411e-01	ci right 8.197808e-01	k: 900968	n:1100000
KS ci ratio: 1.472751e-01	ci left: 5.962310e-04	ci right 6.918847e-04	k: 707	n:1100000
DPYS   1100000 perm   705 sec   (1559 perm/sec)   p_kst 6.427273e-04   p_cons 8.190618e-01   p_joint 6.427273e-04

Joint ci ratio: 1.465524e-01	ci left: 5.969340e-04	ci right 6.921894e-04	k: 714	n:1110000
Cons ci ratio: 1.749136e-03	ci left: 8.182816e-01	ci right 8.197150e-01	k: 909089	n:1110000
KS ci ratio: 1.465524e-01	ci left: 5.969340e-04	ci right 6.921894e-04	k: 714	n:1110000
DPYS   1110000 perm   716 sec   (1549 perm/sec)   p_kst 6.432432e-04   p_cons 8.189991e-01   p_joint 6.432432e-04

Joint ci ratio: 1.461443e-01	ci left: 5.950449e-04	ci right 6.897113e-04	k: 718	n:1120000
Cons ci ratio: 1.741524e-03	ci left: 8.182481e-01	ci right 8.196752e-01	k: 917238	n:1120000
KS ci ratio: 1.461443e-01	ci left: 5.950449e-04	ci right 6.897113e-04	k: 718	n:1120000
DPYS   1120000 perm   728 sec   (1539 perm/sec)   p_kst 6.410714e-04   p_cons 8.189625e-01   p_joint 6.410714e-04

Joint ci ratio: 1.455384e-01	ci left: 5.948950e-04	ci right 6.891110e-04	k: 724	n:1130000
Cons ci ratio: 1.733810e-03	ci left: 8.182499e-01	ci right 8.196706e-01	k: 925426	n:1130000
KS ci ratio: 1.455384e-01	ci left: 5.948950e-04	ci right 6.891110e-04	k: 724	n:1130000
DPYS   1130000 perm   739 sec   (1530 perm/sec)   p_kst 6.407080e-04   p_cons 8.189611e-01   p_joint 6.407080e-04

Joint ci ratio: 1.444464e-01	ci left: 5.989758e-04	ci right 6.930650e-04	k: 735	n:1140000
Cons ci ratio: 1.726222e-03	ci left: 8.182472e-01	ci right 8.196617e-01	k: 933609	n:1140000
KS ci ratio: 1.444464e-01	ci left: 5.989758e-04	ci right 6.930650e-04	k: 735	n:1140000
DPYS   1140000 perm   750 sec   (1520 perm/sec)   p_kst 6.447368e-04   p_cons 8.189553e-01   p_joint 6.447368e-04

Joint ci ratio: 1.438612e-01	ci left: 5.987965e-04	ci right 6.924438e-04	k: 741	n:1150000
Cons ci ratio: 1.719031e-03	ci left: 8.181932e-01	ci right 8.196017e-01	k: 941733	n:1150000
KS ci ratio: 1.438612e-01	ci left: 5.987965e-04	ci right 6.924438e-04	k: 741	n:1150000
DPYS   1150000 perm   761 sec   (1511 perm/sec)   p_kst 6.443478e-04   p_cons 8.188983e-01   p_joint 6.443478e-04

Joint ci ratio: 1.429013e-01	ci left: 6.019460e-04	ci right 6.954041e-04	k: 751	n:1160000
Cons ci ratio: 1.711809e-03	ci left: 8.181608e-01	ci right 8.195634e-01	k: 949881	n:1160000
KS ci ratio: 1.429013e-01	ci left: 6.019460e-04	ci right 6.954041e-04	k: 751	n:1160000
DPYS   1160000 perm   773 sec   (1501 perm/sec)   p_kst 6.474138e-04   p_cons 8.188629e-01   p_joint 6.474138e-04

Joint ci ratio: 1.427119e-01	ci left: 5.984494e-04	ci right 6.912310e-04	k: 753	n:1170000
Cons ci ratio: 1.704462e-03	ci left: 8.181667e-01	ci right 8.195633e-01	k: 958073	n:1170000
KS ci ratio: 1.427119e-01	ci left: 5.984494e-04	ci right 6.912310e-04	k: 753	n:1170000
DPYS   1170000 perm   784 sec   (1492 perm/sec)   p_kst 6.435897e-04   p_cons 8.188658e-01   p_joint 6.435897e-04

Joint ci ratio: 1.419607e-01	ci left: 5.999160e-04	ci right 6.923940e-04	k: 761	n:1180000
Cons ci ratio: 1.697334e-03	ci left: 8.181505e-01	ci right 8.195412e-01	k: 966239	n:1180000
KS ci ratio: 1.419607e-01	ci left: 5.999160e-04	ci right 6.923940e-04	k: 761	n:1180000
DPYS   1180000 perm   796 sec   (1482 perm/sec)   p_kst 6.449153e-04   p_cons 8.188466e-01   p_joint 6.449153e-04

Joint ci ratio: 1.412212e-01	ci left: 6.013593e-04	ci right 6.935362e-04	k: 769	n:1190000
Cons ci ratio: 1.690405e-03	ci left: 8.181152e-01	ci right 8.195001e-01	k: 974382	n:1190000
KS ci ratio: 1.412212e-01	ci left: 6.013593e-04	ci right 6.935362e-04	k: 769	n:1190000
DPYS   1190000 perm   808 sec   (1473 perm/sec)   p_kst 6.462185e-04   p_cons 8.188084e-01   p_joint 6.462185e-04

Joint ci ratio: 1.410384e-01	ci left: 5.979557e-04	ci right 6.894823e-04	k: 771	n:1200000
Cons ci ratio: 1.683196e-03	ci left: 8.181447e-01	ci right 8.195238e-01	k: 982602	n:1200000
KS ci ratio: 1.410384e-01	ci left: 5.979557e-04	ci right 6.894823e-04	k: 771	n:1200000
DPYS   1200000 perm   820 sec   (1464 perm/sec)   p_kst 6.425000e-04   p_cons 8.188350e-01   p_joint 6.425000e-04

Joint ci ratio: 1.406746e-01	ci left: 5.962032e-04	ci right 6.872064e-04	k: 775	n:1210000
Cons ci ratio: 1.675980e-03	ci left: 8.181911e-01	ci right 8.195644e-01	k: 990843	n:1210000
KS ci ratio: 1.406746e-01	ci left: 5.962032e-04	ci right 6.872064e-04	k: 775	n:1210000
DPYS   1210000 perm   831 sec   (1455 perm/sec)   p_kst 6.404959e-04   p_cons 8.188785e-01   p_joint 6.404959e-04

Joint ci ratio: 1.395991e-01	ci left: 6.008076e-04	ci right 6.917541e-04	k: 787	n:1220000
Cons ci ratio: 1.668999e-03	ci left: 8.182114e-01	ci right 8.195789e-01	k: 999053	n:1220000
KS ci ratio: 1.395991e-01	ci left: 6.008076e-04	ci right 6.917541e-04	k: 787	n:1220000
DPYS   1220000 perm   843 sec   (1447 perm/sec)   p_kst 6.450820e-04   p_cons 8.188959e-01   p_joint 6.450820e-04

Joint ci ratio: 1.389831e-01	ci left: 6.014157e-04	ci right 6.920194e-04	k: 794	n:1230000
Cons ci ratio: 1.662460e-03	ci left: 8.181678e-01	ci right 8.195299e-01	k: 1007185	n:1230000
KS ci ratio: 1.389831e-01	ci left: 6.014157e-04	ci right 6.920194e-04	k: 794	n:1230000
DPYS   1230000 perm   856 sec   (1438 perm/sec)   p_kst 6.455285e-04   p_cons 8.188496e-01   p_joint 6.455285e-04

Joint ci ratio: 1.384616e-01	ci left: 6.012363e-04	ci right 6.914451e-04	k: 800	n:1240000
Cons ci ratio: 1.655584e-03	ci left: 8.181992e-01	ci right 8.195557e-01	k: 1015409	n:1240000
KS ci ratio: 1.384616e-01	ci left: 6.012363e-04	ci right 6.914451e-04	k: 800	n:1240000
DPYS   1240000 perm   868 sec   (1429 perm/sec)   p_kst 6.451613e-04   p_cons 8.188782e-01   p_joint 6.451613e-04

Joint ci ratio: 1.376901e-01	ci left: 6.033778e-04	ci right 6.933621e-04	k: 809	n:1250000
Cons ci ratio: 1.649009e-03	ci left: 8.181909e-01	ci right 8.195420e-01	k: 1023584	n:1250000
KS ci ratio: 1.376901e-01	ci left: 6.033778e-04	ci right 6.933621e-04	k: 809	n:1250000
DPYS   1250000 perm   880 sec   (1421 perm/sec)   p_kst 6.472000e-04   p_cons 8.188672e-01   p_joint 6.472000e-04

Joint ci ratio: 1.371830e-01	ci left: 6.031872e-04	ci right 6.927847e-04	k: 815	n:1260000
Cons ci ratio: 1.642315e-03	ci left: 8.182185e-01	ci right 8.195642e-01	k: 1031804	n:1260000
KS ci ratio: 1.371830e-01	ci left: 6.031872e-04	ci right 6.927847e-04	k: 815	n:1260000
DPYS   1260000 perm   892 sec   (1412 perm/sec)   p_kst 6.468254e-04   p_cons 8.188921e-01   p_joint 6.468254e-04

Joint ci ratio: 1.366814e-01	ci left: 6.030003e-04	ci right 6.922159e-04	k: 821	n:1270000
Cons ci ratio: 1.635949e-03	ci left: 8.182007e-01	ci right 8.195411e-01	k: 1039967	n:1270000
KS ci ratio: 1.366814e-01	ci left: 6.030003e-04	ci right 6.922159e-04	k: 821	n:1270000
DPYS   1270000 perm   905 sec   (1404 perm/sec)   p_kst 6.464567e-04   p_cons 8.188717e-01   p_joint 6.464567e-04

Joint ci ratio: 1.359391e-01	ci left: 6.050809e-04	ci right 6.940788e-04	k: 830	n:1280000
Cons ci ratio: 1.629613e-03	ci left: 8.181911e-01	ci right 8.195262e-01	k: 1048140	n:1280000
KS ci ratio: 1.359391e-01	ci left: 6.050809e-04	ci right 6.940788e-04	k: 830	n:1280000
DPYS   1280000 perm   917 sec   (1396 perm/sec)   p_kst 6.484375e-04   p_cons 8.188594e-01   p_joint 6.484375e-04

Joint ci ratio: 1.351283e-01	ci left: 6.078795e-04	ci right 6.967129e-04	k: 840	n:1290000
Cons ci ratio: 1.623381e-03	ci left: 8.181761e-01	ci right 8.195062e-01	k: 1056306	n:1290000
KS ci ratio: 1.351283e-01	ci left: 6.078795e-04	ci right 6.967129e-04	k: 840	n:1290000
DPYS   1290000 perm   929 sec   (1388 perm/sec)   p_kst 6.511628e-04   p_cons 8.188419e-01   p_joint 6.511628e-04

Joint ci ratio: 1.344109e-01	ci left: 6.098932e-04	ci right 6.985099e-04	k: 849	n:1300000
Cons ci ratio: 1.617219e-03	ci left: 8.181614e-01	ci right 8.194864e-01	k: 1064472	n:1300000
KS ci ratio: 1.344109e-01	ci left: 6.098932e-04	ci right 6.985099e-04	k: 849	n:1300000
DPYS   1300000 perm   942 sec   (1380 perm/sec)   p_kst 6.530769e-04   p_cons 8.188246e-01   p_joint 6.530769e-04

Joint ci ratio: 1.337827e-01	ci left: 6.111395e-04	ci right 6.994893e-04	k: 857	n:1310000
Cons ci ratio: 1.611263e-03	ci left: 8.181217e-01	ci right 8.194417e-01	k: 1072605	n:1310000
KS ci ratio: 1.337827e-01	ci left: 6.111395e-04	ci right 6.994893e-04	k: 857	n:1310000
DPYS   1310000 perm   955 sec   (1372 perm/sec)   p_kst 6.541985e-04   p_cons 8.187824e-01   p_joint 6.541985e-04

Joint ci ratio: 1.334721e-01	ci left: 6.094387e-04	ci right 6.973217e-04	k: 861	n:1320000
Cons ci ratio: 1.605066e-03	ci left: 8.181395e-01	ci right 8.194545e-01	k: 1080813	n:1320000
KS ci ratio: 1.334721e-01	ci left: 6.094387e-04	ci right 6.973217e-04	k: 861	n:1320000
DPYS   1320000 perm   968 sec   (1364 perm/sec)   p_kst 6.522727e-04   p_cons 8.187977e-01   p_joint 6.522727e-04

Joint ci ratio: 1.329334e-01	ci left: 6.099442e-04	ci right 6.975172e-04	k: 868	n:1330000
Cons ci ratio: 1.598895e-03	ci left: 8.181654e-01	ci right 8.194753e-01	k: 1089032	n:1330000
KS ci ratio: 1.329334e-01	ci left: 6.099442e-04	ci right 6.975172e-04	k: 868	n:1330000
DPYS   1330000 perm   981 sec   (1356 perm/sec)   p_kst 6.526316e-04   p_cons 8.188211e-01   p_joint 6.526316e-04

Joint ci ratio: 1.322502e-01	ci left: 6.118860e-04	ci right 6.992508e-04	k: 877	n:1340000
Cons ci ratio: 1.592882e-03	ci left: 8.181744e-01	ci right 8.194794e-01	k: 1097229	n:1340000
KS ci ratio: 1.322502e-01	ci left: 6.118860e-04	ci right 6.992508e-04	k: 877	n:1340000
DPYS   1340000 perm   994 sec   (1348 perm/sec)   p_kst 6.544776e-04   p_cons 8.188276e-01   p_joint 6.544776e-04

Joint ci ratio: 1.318753e-01	ci left: 6.109349e-04	ci right 6.978972e-04	k: 882	n:1350000
Cons ci ratio: 1.586993e-03	ci left: 8.181729e-01	ci right 8.194731e-01	k: 1105412	n:1350000
KS ci ratio: 1.318753e-01	ci left: 6.109349e-04	ci right 6.978972e-04	k: 882	n:1350000
DPYS   1350000 perm   1007 sec   (1340 perm/sec)   p_kst 6.533333e-04   p_cons 8.188237e-01   p_joint 6.533333e-04

Joint ci ratio: 1.315777e-01	ci left: 6.092869e-04	ci right 6.958037e-04	k: 886	n:1360000
Cons ci ratio: 1.581223e-03	ci left: 8.181612e-01	ci right 8.194566e-01	k: 1113581	n:1360000
KS ci ratio: 1.315777e-01	ci left: 6.092869e-04	ci right 6.958037e-04	k: 886	n:1360000
DPYS   1360000 perm   1020 sec   (1333 perm/sec)   p_kst 6.514706e-04   p_cons 8.188096e-01   p_joint 6.514706e-04

Joint ci ratio: 1.313560e-01	ci left: 6.069573e-04	ci right 6.929867e-04	k: 889	n:1370000
Cons ci ratio: 1.575271e-03	ci left: 8.181956e-01	ci right 8.194862e-01	k: 1121813	n:1370000
KS ci ratio: 1.313560e-01	ci left: 6.069573e-04	ci right 6.929867e-04	k: 889	n:1370000
DPYS   1370000 perm   1033 sec   (1326 perm/sec)   p_kst 6.489051e-04   p_cons 8.188416e-01   p_joint 6.489051e-04

Joint ci ratio: 1.309886e-01	ci left: 6.060633e-04	ci right 6.917071e-04	k: 894	n:1380000
Cons ci ratio: 1.569697e-03	ci left: 8.181708e-01	ci right 8.194568e-01	k: 1129964	n:1380000
KS ci ratio: 1.309886e-01	ci left: 6.060633e-04	ci right 6.917071e-04	k: 894	n:1380000
DPYS   1380000 perm   1046 sec   (1319 perm/sec)   p_kst 6.478261e-04   p_cons 8.188145e-01   p_joint 6.478261e-04

Joint ci ratio: 1.304070e-01	ci left: 6.072704e-04	ci right 6.926742e-04	k: 902	n:1390000
Cons ci ratio: 1.564059e-03	ci left: 8.181694e-01	ci right 8.194508e-01	k: 1138147	n:1390000
KS ci ratio: 1.304070e-01	ci left: 6.072704e-04	ci right 6.926742e-04	k: 902	n:1390000
DPYS   1390000 perm   1060 sec   (1311 perm/sec)   p_kst 6.489209e-04   p_cons 8.188108e-01   p_joint 6.489209e-04

Joint ci ratio: 1.301911e-01	ci left: 6.050057e-04	ci right 6.899392e-04	k: 905	n:1400000
Cons ci ratio: 1.558528e-03	ci left: 8.181595e-01	ci right 8.194363e-01	k: 1146318	n:1400000
KS ci ratio: 1.301911e-01	ci left: 6.050057e-04	ci right 6.899392e-04	k: 905	n:1400000
DPYS   1400000 perm   1074 sec   (1304 perm/sec)   p_kst 6.464286e-04   p_cons 8.187986e-01   p_joint 6.464286e-04

Joint ci ratio: 1.294077e-01	ci left: 6.082631e-04	ci right 6.931006e-04	k: 916	n:1410000
Cons ci ratio: 1.552928e-03	ci left: 8.181739e-01	ci right 8.194461e-01	k: 1154523	n:1410000
KS ci ratio: 1.294077e-01	ci left: 6.082631e-04	ci right 6.931006e-04	k: 916	n:1410000
DPYS   1410000 perm   1087 sec   (1297 perm/sec)   p_kst 6.496454e-04   p_cons 8.188106e-01   p_joint 6.496454e-04

Joint ci ratio: 1.288468e-01	ci left: 6.094314e-04	ci right 6.940352e-04	k: 924	n:1420000
Cons ci ratio: 1.547495e-03	ci left: 8.181676e-01	ci right 8.194353e-01	k: 1162699	n:1420000
KS ci ratio: 1.288468e-01	ci left: 6.094314e-04	ci right 6.940352e-04	k: 924	n:1420000
DPYS   1420000 perm   1101 sec   (1289 perm/sec)   p_kst 6.507042e-04   p_cons 8.188021e-01   p_joint 6.507042e-04

Joint ci ratio: 1.285692e-01	ci left: 6.078767e-04	ci right 6.920691e-04	k: 928	n:1430000
Cons ci ratio: 1.542260e-03	ci left: 8.181341e-01	ci right 8.193975e-01	k: 1170836	n:1430000
KS ci ratio: 1.285692e-01	ci left: 6.078767e-04	ci right 6.920691e-04	k: 928	n:1430000
DPYS   1430000 perm   1115 sec   (1283 perm/sec)   p_kst 6.489510e-04   p_cons 8.187664e-01   p_joint 6.489510e-04

Joint ci ratio: 1.282247e-01	ci left: 6.070160e-04	ci right 6.908468e-04	k: 933	n:1440000
Cons ci ratio: 1.536779e-03	ci left: 8.181588e-01	ci right 8.194177e-01	k: 1179056	n:1440000
KS ci ratio: 1.282247e-01	ci left: 6.070160e-04	ci right 6.908468e-04	k: 933	n:1440000
DPYS   1440000 perm   1128 sec   (1276 perm/sec)   p_kst 6.479167e-04   p_cons 8.187889e-01   p_joint 6.479167e-04

Joint ci ratio: 1.276112e-01	ci left: 6.088380e-04	ci right 6.924877e-04	k: 942	n:1450000
Cons ci ratio: 1.531435e-03	ci left: 8.181679e-01	ci right 8.194225e-01	k: 1187254	n:1450000
KS ci ratio: 1.276112e-01	ci left: 6.088380e-04	ci right 6.924877e-04	k: 942	n:1450000
DPYS   1450000 perm   1142 sec   (1269 perm/sec)   p_kst 6.496552e-04   p_cons 8.187959e-01   p_joint 6.496552e-04

Joint ci ratio: 1.269398e-01	ci left: 6.112992e-04	ci right 6.948118e-04	k: 952	n:1460000
Cons ci ratio: 1.526280e-03	ci left: 8.181509e-01	ci right 8.194013e-01	k: 1195414	n:1460000
KS ci ratio: 1.269398e-01	ci left: 6.112992e-04	ci right 6.948118e-04	k: 952	n:1460000
DPYS   1460000 perm   1156 sec   (1263 perm/sec)   p_kst 6.520548e-04   p_cons 8.187767e-01   p_joint 6.520548e-04

Joint ci ratio: 1.267406e-01	ci left: 6.091167e-04	ci right 6.921908e-04	k: 955	n:1470000
Cons ci ratio: 1.521145e-03	ci left: 8.181403e-01	ci right 8.193864e-01	k: 1203583	n:1470000
KS ci ratio: 1.267406e-01	ci left: 6.091167e-04	ci right 6.921908e-04	k: 955	n:1470000
DPYS   1470000 perm   1170 sec   (1256 perm/sec)   p_kst 6.496599e-04   p_cons 8.187639e-01   p_joint 6.496599e-04

Joint ci ratio: 1.263447e-01	ci left: 6.089268e-04	ci right 6.916962e-04	k: 961	n:1480000
Cons ci ratio: 1.515975e-03	ci left: 8.181467e-01	ci right 8.193886e-01	k: 1211777	n:1480000
KS ci ratio: 1.263447e-01	ci left: 6.089268e-04	ci right 6.916962e-04	k: 961	n:1480000
DPYS   1480000 perm   1185 sec   (1249 perm/sec)   p_kst 6.493243e-04   p_cons 8.187682e-01   p_joint 6.493243e-04

Joint ci ratio: 1.259526e-01	ci left: 6.087398e-04	ci right 6.912078e-04	k: 967	n:1490000
Cons ci ratio: 1.511128e-03	ci left: 8.180999e-01	ci right 8.193378e-01	k: 1219892	n:1490000
KS ci ratio: 1.259526e-01	ci left: 6.087398e-04	ci right 6.912078e-04	k: 967	n:1490000
DPYS   1490000 perm   1199 sec   (1243 perm/sec)   p_kst 6.489933e-04   p_cons 8.187195e-01   p_joint 6.489933e-04

Joint ci ratio: 1.255641e-01	ci left: 6.085557e-04	ci right 6.907255e-04	k: 973	n:1500000
Cons ci ratio: 1.506073e-03	ci left: 8.181039e-01	ci right 8.193376e-01	k: 1228082	n:1500000
KS ci ratio: 1.255641e-01	ci left: 6.085557e-04	ci right 6.907255e-04	k: 973	n:1500000
DPYS   1500000 perm   1213 sec   (1237 perm/sec)   p_kst 6.486667e-04   p_cons 8.187213e-01   p_joint 6.486667e-04

Joint ci ratio: 1.253071e-01	ci left: 6.070914e-04	ci right 6.888833e-04	k: 977	n:1510000
Cons ci ratio: 1.501212e-03	ci left: 8.180793e-01	ci right 8.193089e-01	k: 1236229	n:1510000
KS ci ratio: 1.253071e-01	ci left: 6.070914e-04	ci right 6.888833e-04	k: 977	n:1510000
DPYS   1510000 perm   1227 sec   (1230 perm/sec)   p_kst 6.470199e-04   p_cons 8.186947e-01   p_joint 6.470199e-04

Joint ci ratio: 1.249881e-01	ci left: 6.062838e-04	ci right 6.877436e-04	k: 982	n:1520000
Cons ci ratio: 1.496176e-03	ci left: 8.180991e-01	ci right 8.193247e-01	k: 1244443	n:1520000
KS ci ratio: 1.249881e-01	ci left: 6.062838e-04	ci right 6.877436e-04	k: 982	n:1520000
DPYS   1520000 perm   1242 sec   (1224 perm/sec)   p_kst 6.460526e-04   p_cons 8.187125e-01   p_joint 6.460526e-04

Joint ci ratio: 1.246084e-01	ci left: 6.061203e-04	ci right 6.872924e-04	k: 988	n:1530000
Cons ci ratio: 1.491148e-03	ci left: 8.181272e-01	ci right 8.193487e-01	k: 1252670	n:1530000
KS ci ratio: 1.246084e-01	ci left: 6.061203e-04	ci right 6.872924e-04	k: 988	n:1530000
DPYS   1530000 perm   1257 sec   (1217 perm/sec)   p_kst 6.457516e-04   p_cons 8.187386e-01   p_joint 6.457516e-04

Joint ci ratio: 1.242947e-01	ci left: 6.053302e-04	ci right 6.861773e-04	k: 993	n:1540000
Cons ci ratio: 1.486235e-03	ci left: 8.181420e-01	ci right 8.193594e-01	k: 1260877	n:1540000
KS ci ratio: 1.242947e-01	ci left: 6.053302e-04	ci right 6.861773e-04	k: 993	n:1540000
DPYS   1540000 perm   1272 sec   (1211 perm/sec)   p_kst 6.448052e-04   p_cons 8.187513e-01   p_joint 6.448052e-04

Joint ci ratio: 1.239833e-01	ci left: 6.045504e-04	ci right 6.850763e-04	k: 998	n:1550000
Cons ci ratio: 1.481312e-03	ci left: 8.181681e-01	ci right 8.193816e-01	k: 1269102	n:1550000
KS ci ratio: 1.239833e-01	ci left: 6.045504e-04	ci right 6.850763e-04	k: 998	n:1550000
DPYS   1550000 perm   1286 sec   (1205 perm/sec)   p_kst 6.438710e-04   p_cons 8.187755e-01   p_joint 6.438710e-04

Joint ci ratio: 1.239215e-01	ci left: 6.012962e-04	ci right 6.813458e-04	k: 999	n:1560000
Cons ci ratio: 1.476715e-03	ci left: 8.181382e-01	ci right 8.193478e-01	k: 1277240	n:1560000
KS ci ratio: 1.239215e-01	ci left: 6.012962e-04	ci right 6.813458e-04	k: 999	n:1560000
DPYS   1560000 perm   1301 sec   (1199 perm/sec)   p_kst 6.403846e-04   p_cons 8.187436e-01   p_joint 6.403846e-04

Joint ci ratio: 1.236745e-01	ci left: 5.999351e-04	ci right 6.796326e-04	k: 1003	n:1570000
Cons ci ratio: 1.471933e-03	ci left: 8.181545e-01	ci right 8.193603e-01	k: 1285450	n:1570000
KS ci ratio: 1.236745e-01	ci left: 5.999351e-04	ci right 6.796326e-04	k: 1003	n:1570000
DPYS   1570000 perm   1315 sec   (1193 perm/sec)   p_kst 6.388535e-04   p_cons 8.187580e-01   p_joint 6.388535e-04

Joint ci ratio: 1.233677e-01	ci left: 5.992048e-04	ci right 6.785935e-04	k: 1008	n:1580000
Cons ci ratio: 1.467276e-03	ci left: 8.181548e-01	ci right 8.193567e-01	k: 1293635	n:1580000
KS ci ratio: 1.233677e-01	ci left: 5.992048e-04	ci right 6.785935e-04	k: 1008	n:1580000
DPYS   1580000 perm   1331 sec   (1187 perm/sec)   p_kst 6.379747e-04   p_cons 8.187563e-01   p_joint 6.379747e-04

Joint ci ratio: 1.227005e-01	ci left: 6.021416e-04	ci right 6.814566e-04	k: 1019	n:1590000
Cons ci ratio: 1.462619e-03	ci left: 8.181639e-01	ci right 8.193620e-01	k: 1301834	n:1590000
KS ci ratio: 1.227005e-01	ci left: 6.021416e-04	ci right 6.814566e-04	k: 1019	n:1590000
DPYS   1590000 perm   1346 sec   (1182 perm/sec)   p_kst 6.408805e-04   p_cons 8.187635e-01   p_joint 6.408805e-04

Joint ci ratio: 1.219849e-01	ci left: 6.056488e-04	ci right 6.849268e-04	k: 1031	n:1600000
Cons ci ratio: 1.458295e-03	ci left: 8.181140e-01	ci right 8.193086e-01	k: 1309939	n:1600000
KS ci ratio: 1.219849e-01	ci left: 6.056488e-04	ci right 6.849268e-04	k: 1031	n:1600000
DPYS   1600000 perm   1361 sec   (1176 perm/sec)   p_kst 6.443750e-04   p_cons 8.187119e-01   p_joint 6.443750e-04

Joint ci ratio: 1.216905e-01	ci left: 6.048979e-04	ci right 6.838728e-04	k: 1036	n:1610000
Cons ci ratio: 1.453772e-03	ci left: 8.181133e-01	ci right 8.193042e-01	k: 1318122	n:1610000
KS ci ratio: 1.216905e-01	ci left: 6.048979e-04	ci right 6.838728e-04	k: 1036	n:1610000
DPYS   1610000 perm   1376 sec   (1170 perm/sec)   p_kst 6.434783e-04   p_cons 8.187093e-01   p_joint 6.434783e-04

Joint ci ratio: 1.215735e-01	ci left: 6.023609e-04	ci right 6.809235e-04	k: 1038	n:1620000
Cons ci ratio: 1.449347e-03	ci left: 8.181009e-01	ci right 8.192881e-01	k: 1326286	n:1620000
KS ci ratio: 1.215735e-01	ci left: 6.023609e-04	ci right 6.809235e-04	k: 1038	n:1620000
DPYS   1620000 perm   1392 sec   (1164 perm/sec)   p_kst 6.407407e-04   p_cons 8.186951e-01   p_joint 6.407407e-04

Joint ci ratio: 1.209348e-01	ci left: 6.052093e-04	ci right 6.836991e-04	k: 1049	n:1630000
Cons ci ratio: 1.445023e-03	ci left: 8.180764e-01	ci right 8.192599e-01	k: 1334430	n:1630000
KS ci ratio: 1.209348e-01	ci left: 6.052093e-04	ci right 6.836991e-04	k: 1049	n:1630000
DPYS   1630000 perm   1407 sec   (1158 perm/sec)   p_kst 6.435583e-04   p_cons 8.186687e-01   p_joint 6.435583e-04

Joint ci ratio: 1.204767e-01	ci left: 6.062498e-04	ci right 6.845554e-04	k: 1057	n:1640000
Cons ci ratio: 1.440621e-03	ci left: 8.180759e-01	ci right 8.192559e-01	k: 1342613	n:1640000
KS ci ratio: 1.204767e-01	ci left: 6.062498e-04	ci right 6.845554e-04	k: 1057	n:1640000
DPYS   1640000 perm   1423 sec   (1153 perm/sec)   p_kst 6.445122e-04   p_cons 8.186665e-01   p_joint 6.445122e-04

Joint ci ratio: 1.199112e-01	ci left: 6.084540e-04	ci right 6.866493e-04	k: 1067	n:1650000
Cons ci ratio: 1.436316e-03	ci left: 8.180640e-01	ci right 8.192404e-01	k: 1350777	n:1650000
KS ci ratio: 1.199112e-01	ci left: 6.084540e-04	ci right 6.866493e-04	k: 1067	n:1650000
DPYS   1650000 perm   1438 sec   (1147 perm/sec)   p_kst 6.466667e-04   p_cons 8.186527e-01   p_joint 6.466667e-04

Joint ci ratio: 1.194645e-01	ci left: 6.094636e-04	ci right 6.874763e-04	k: 1075	n:1660000
Cons ci ratio: 1.431871e-03	ci left: 8.180889e-01	ci right 8.192618e-01	k: 1359002	n:1660000
KS ci ratio: 1.194645e-01	ci left: 6.094636e-04	ci right 6.874763e-04	k: 1075	n:1660000
DPYS   1660000 perm   1454 sec   (1142 perm/sec)   p_kst 6.475904e-04   p_cons 8.186759e-01   p_joint 6.475904e-04

Joint ci ratio: 1.192985e-01	ci left: 6.075569e-04	ci right 6.852098e-04	k: 1078	n:1670000
Cons ci ratio: 1.427718e-03	ci left: 8.180615e-01	ci right 8.192308e-01	k: 1367140	n:1670000
KS ci ratio: 1.192985e-01	ci left: 6.075569e-04	ci right 6.852098e-04	k: 1078	n:1670000
DPYS   1670000 perm   1470 sec   (1136 perm/sec)   p_kst 6.455090e-04   p_cons 8.186467e-01   p_joint 6.455090e-04

Joint ci ratio: 1.188039e-01	ci left: 6.091381e-04	ci right 6.866477e-04	k: 1087	n:1680000
Cons ci ratio: 1.423544e-03	ci left: 8.180462e-01	ci right 8.192122e-01	k: 1375298	n:1680000
KS ci ratio: 1.188039e-01	ci left: 6.091381e-04	ci right 6.866477e-04	k: 1087	n:1680000
DPYS   1680000 perm   1486 sec   (1131 perm/sec)   p_kst 6.470238e-04   p_cons 8.186298e-01   p_joint 6.470238e-04

Joint ci ratio: 1.184777e-01	ci left: 6.089787e-04	ci right 6.862403e-04	k: 1093	n:1690000
Cons ci ratio: 1.419315e-03	ci left: 8.180502e-01	ci right 8.192126e-01	k: 1383488	n:1690000
KS ci ratio: 1.184777e-01	ci left: 6.089787e-04	ci right 6.862403e-04	k: 1093	n:1690000
DPYS   1690000 perm   1502 sec   (1126 perm/sec)   p_kst 6.467456e-04   p_cons 8.186320e-01   p_joint 6.467456e-04

Joint ci ratio: 1.183157e-01	ci left: 6.071088e-04	ci right 6.840206e-04	k: 1096	n:1700000
Cons ci ratio: 1.415001e-03	ci left: 8.180800e-01	ci right 8.192389e-01	k: 1391722	n:1700000
KS ci ratio: 1.183157e-01	ci left: 6.071088e-04	ci right 6.840206e-04	k: 1096	n:1700000
DPYS   1700000 perm   1517 sec   (1120 perm/sec)   p_kst 6.447059e-04   p_cons 8.186600e-01   p_joint 6.447059e-04

Joint ci ratio: 1.176206e-01	ci left: 6.109366e-04	ci right 6.878469e-04	k: 1109	n:1710000
Cons ci ratio: 1.410968e-03	ci left: 8.180585e-01	ci right 8.192141e-01	k: 1399869	n:1710000
KS ci ratio: 1.176206e-01	ci left: 6.109366e-04	ci right 6.878469e-04	k: 1109	n:1710000
DPYS   1710000 perm   1533 sec   (1115 perm/sec)   p_kst 6.485380e-04   p_cons 8.186368e-01   p_joint 6.485380e-04

Joint ci ratio: 1.173040e-01	ci left: 6.107705e-04	ci right 6.874386e-04	k: 1115	n:1720000
Cons ci ratio: 1.406776e-03	ci left: 8.180780e-01	ci right 8.192302e-01	k: 1408086	n:1720000
KS ci ratio: 1.173040e-01	ci left: 6.107705e-04	ci right 6.874386e-04	k: 1115	n:1720000
DPYS   1720000 perm   1550 sec   (1110 perm/sec)   p_kst 6.482558e-04   p_cons 8.186547e-01   p_joint 6.482558e-04

Joint ci ratio: 1.169900e-01	ci left: 6.106066e-04	ci right 6.870348e-04	k: 1121	n:1730000
Cons ci ratio: 1.402684e-03	ci left: 8.180840e-01	ci right 8.192329e-01	k: 1416280	n:1730000
KS ci ratio: 1.169900e-01	ci left: 6.106066e-04	ci right 6.870348e-04	k: 1121	n:1730000
DPYS   1730000 perm   1566 sec   (1105 perm/sec)   p_kst 6.479769e-04   p_cons 8.186590e-01   p_joint 6.479769e-04

Joint ci ratio: 1.167821e-01	ci left: 6.093290e-04	ci right 6.854524e-04	k: 1125	n:1740000
Cons ci ratio: 1.398833e-03	ci left: 8.180462e-01	ci right 8.191918e-01	k: 1424398	n:1740000
KS ci ratio: 1.167821e-01	ci left: 6.093290e-04	ci right 6.854524e-04	k: 1125	n:1740000
DPYS   1740000 perm   1583 sec   (1099 perm/sec)   p_kst 6.465517e-04   p_cons 8.186195e-01   p_joint 6.465517e-04

Joint ci ratio: 1.164722e-01	ci left: 6.091757e-04	ci right 6.850641e-04	k: 1131	n:1750000
Cons ci ratio: 1.394686e-03	ci left: 8.180786e-01	ci right 8.192209e-01	k: 1432638	n:1750000
KS ci ratio: 1.164722e-01	ci left: 6.091757e-04	ci right 6.850641e-04	k: 1131	n:1750000
DPYS   1750000 perm   1599 sec   (1094 perm/sec)   p_kst 6.462857e-04   p_cons 8.186503e-01   p_joint 6.462857e-04

Joint ci ratio: 1.159102e-01	ci left: 6.117829e-04	ci right 6.876032e-04	k: 1142	n:1760000
Cons ci ratio: 1.390669e-03	ci left: 8.180908e-01	ci right 8.192298e-01	k: 1440843	n:1760000
KS ci ratio: 1.159102e-01	ci left: 6.117829e-04	ci right 6.876032e-04	k: 1142	n:1760000
DPYS   1760000 perm   1616 sec   (1089 perm/sec)   p_kst 6.488636e-04   p_cons 8.186608e-01   p_joint 6.488636e-04

Joint ci ratio: 1.158091e-01	ci left: 6.094236e-04	ci right 6.848811e-04	k: 1144	n:1770000
Cons ci ratio: 1.386657e-03	ci left: 8.181090e-01	ci right 8.192448e-01	k: 1449059	n:1770000
KS ci ratio: 1.158091e-01	ci left: 6.094236e-04	ci right 6.848811e-04	k: 1144	n:1770000
DPYS   1770000 perm   1632 sec   (1084 perm/sec)   p_kst 6.463277e-04   p_cons 8.186774e-01   p_joint 6.463277e-04

Joint ci ratio: 1.154567e-01	ci left: 6.098187e-04	ci right 6.850798e-04	k: 1151	n:1780000
Cons ci ratio: 1.382879e-03	ci left: 8.180843e-01	ci right 8.192169e-01	k: 1457199	n:1780000
KS ci ratio: 1.154567e-01	ci left: 6.098187e-04	ci right 6.850798e-04	k: 1151	n:1780000
DPYS   1780000 perm   1650 sec   (1079 perm/sec)   p_kst 6.466292e-04   p_cons 8.186511e-01   p_joint 6.466292e-04

Joint ci ratio: 1.152070e-01	ci left: 6.091246e-04	ci right 6.841263e-04	k: 1156	n:1790000
Cons ci ratio: 1.378955e-03	ci left: 8.180979e-01	ci right 8.192273e-01	k: 1465407	n:1790000
KS ci ratio: 1.152070e-01	ci left: 6.091246e-04	ci right 6.841263e-04	k: 1156	n:1790000
DPYS   1790000 perm   1666 sec   (1074 perm/sec)   p_kst 6.458101e-04   p_cons 8.186631e-01   p_joint 6.458101e-04

Joint ci ratio: 1.150580e-01	ci left: 6.073592e-04	ci right 6.820403e-04	k: 1159	n:1800000
Cons ci ratio: 1.375191e-03	ci left: 8.180841e-01	ci right 8.192104e-01	k: 1473566	n:1800000
KS ci ratio: 1.150580e-01	ci left: 6.073592e-04	ci right 6.820403e-04	k: 1159	n:1800000
DPYS   1800000 perm   1683 sec   (1069 perm/sec)   p_kst 6.438889e-04   p_cons 8.186478e-01   p_joint 6.438889e-04

Joint ci ratio: 1.149591e-01	ci left: 6.050768e-04	ci right 6.794089e-04	k: 1161	n:1810000
Cons ci ratio: 1.371367e-03	ci left: 8.180898e-01	ci right 8.192130e-01	k: 1481760	n:1810000
KS ci ratio: 1.149591e-01	ci left: 6.050768e-04	ci right 6.794089e-04	k: 1161	n:1810000
DPYS   1810000 perm   1700 sec   (1064 perm/sec)   p_kst 6.414365e-04   p_cons 8.186519e-01   p_joint 6.414365e-04

Joint ci ratio: 1.148111e-01	ci left: 6.033532e-04	ci right 6.773717e-04	k: 1164	n:1820000
Cons ci ratio: 1.367401e-03	ci left: 8.181334e-01	ci right 8.192535e-01	k: 1490023	n:1820000
KS ci ratio: 1.148111e-01	ci left: 6.033532e-04	ci right 6.773717e-04	k: 1164	n:1820000
DPYS   1820000 perm   1717 sec   (1060 perm/sec)   p_kst 6.395604e-04   p_cons 8.186940e-01   p_joint 6.395604e-04

Joint ci ratio: 1.147620e-01	ci left: 6.005869e-04	ci right 6.742324e-04	k: 1165	n:1830000
Cons ci ratio: 1.363705e-03	ci left: 8.181252e-01	ci right 8.192421e-01	k: 1498192	n:1830000
KS ci ratio: 1.147620e-01	ci left: 6.005869e-04	ci right 6.742324e-04	k: 1165	n:1830000
DPYS   1830000 perm   1734 sec   (1055 perm/sec)   p_kst 6.366120e-04   p_cons 8.186842e-01   p_joint 6.366120e-04

Joint ci ratio: 1.145168e-01	ci left: 5.999623e-04	ci right 6.733633e-04	k: 1170	n:1840000
Cons ci ratio: 1.359986e-03	ci left: 8.181284e-01	ci right 8.192423e-01	k: 1506382	n:1840000
KS ci ratio: 1.145168e-01	ci left: 5.999623e-04	ci right 6.733633e-04	k: 1170	n:1840000
DPYS   1840000 perm   1751 sec   (1051 perm/sec)   p_kst 6.358696e-04   p_cons 8.186859e-01   p_joint 6.358696e-04

Joint ci ratio: 1.142246e-01	ci left: 5.998697e-04	ci right 6.730595e-04	k: 1176	n:1850000
Cons ci ratio: 1.356409e-03	ci left: 8.181073e-01	ci right 8.192182e-01	k: 1514527	n:1850000
KS ci ratio: 1.142246e-01	ci left: 5.998697e-04	ci right 6.730595e-04	k: 1176	n:1850000
DPYS   1850000 perm   1769 sec   (1046 perm/sec)   p_kst 6.356757e-04   p_cons 8.186632e-01   p_joint 6.356757e-04

Joint ci ratio: 1.140310e-01	ci left: 5.987337e-04	ci right 6.716529e-04	k: 1180	n:1860000
Cons ci ratio: 1.352696e-03	ci left: 8.181224e-01	ci right 8.192304e-01	k: 1522739	n:1860000
KS ci ratio: 1.140310e-01	ci left: 5.987337e-04	ci right 6.716529e-04	k: 1180	n:1860000
DPYS   1860000 perm   1786 sec   (1041 perm/sec)   p_kst 6.344086e-04   p_cons 8.186769e-01   p_joint 6.344086e-04

Joint ci ratio: 1.136467e-01	ci left: 5.996882e-04	ci right 6.724609e-04	k: 1188	n:1870000
Cons ci ratio: 1.349224e-03	ci left: 8.180908e-01	ci right 8.191959e-01	k: 1530864	n:1870000
KS ci ratio: 1.136467e-01	ci left: 5.996882e-04	ci right 6.724609e-04	k: 1188	n:1870000
DPYS   1870000 perm   1804 sec   (1037 perm/sec)   p_kst 6.352941e-04   p_cons 8.186439e-01   p_joint 6.352941e-04

Joint ci ratio: 1.134086e-01	ci left: 5.990824e-04	ci right 6.716191e-04	k: 1193	n:1880000
Cons ci ratio: 1.345683e-03	ci left: 8.180809e-01	ci right 8.191830e-01	k: 1539029	n:1880000
KS ci ratio: 1.134086e-01	ci left: 5.990824e-04	ci right 6.716191e-04	k: 1193	n:1880000
DPYS   1880000 perm   1822 sec   (1032 perm/sec)   p_kst 6.345745e-04   p_cons 8.186324e-01   p_joint 6.345745e-04

Joint ci ratio: 1.129835e-01	ci left: 6.005398e-04	ci right 6.729622e-04	k: 1202	n:1890000
Cons ci ratio: 1.342152e-03	ci left: 8.180748e-01	ci right 8.191740e-01	k: 1547201	n:1890000
KS ci ratio: 1.129835e-01	ci left: 6.005398e-04	ci right 6.729622e-04	k: 1202	n:1890000
DPYS   1890000 perm   1839 sec   (1028 perm/sec)   p_kst 6.359788e-04   p_cons 8.186249e-01   p_joint 6.359788e-04

Joint ci ratio: 1.124703e-01	ci left: 6.030053e-04	ci right 6.753729e-04	k: 1213	n:1900000
Cons ci ratio: 1.338666e-03	ci left: 8.180650e-01	ci right 8.191614e-01	k: 1555366	n:1900000
KS ci ratio: 1.124703e-01	ci left: 6.030053e-04	ci right 6.753729e-04	k: 1213	n:1900000
DPYS   1900000 perm   1857 sec   (1023 perm/sec)   p_kst 6.384211e-04   p_cons 8.186137e-01   p_joint 6.384211e-04

Joint ci ratio: 1.119640e-01	ci left: 6.054458e-04	ci right 6.777576e-04	k: 1224	n:1910000
Cons ci ratio: 1.335233e-03	ci left: 8.180496e-01	ci right 8.191431e-01	k: 1563520	n:1910000
KS ci ratio: 1.119640e-01	ci left: 6.054458e-04	ci right 6.777576e-04	k: 1224	n:1910000
DPYS   1910000 perm   1875 sec   (1019 perm/sec)   p_kst 6.408377e-04   p_cons 8.185969e-01   p_joint 6.408377e-04

Joint ci ratio: 1.113744e-01	ci left: 6.088742e-04	ci right 6.811874e-04	k: 1237	n:1920000
Cons ci ratio: 1.331711e-03	ci left: 8.180599e-01	ci right 8.191506e-01	k: 1571723	n:1920000
KS ci ratio: 1.113744e-01	ci left: 6.088742e-04	ci right 6.811874e-04	k: 1237	n:1920000
DPYS   1920000 perm   1893 sec   (1014 perm/sec)   p_kst 6.442708e-04   p_cons 8.186057e-01   p_joint 6.442708e-04

Joint ci ratio: 1.111056e-01	ci left: 6.087417e-04	ci right 6.808532e-04	k: 1243	n:1930000
Cons ci ratio: 1.328201e-03	ci left: 8.180738e-01	ci right 8.191616e-01	k: 1579933	n:1930000
KS ci ratio: 1.111056e-01	ci left: 6.087417e-04	ci right 6.808532e-04	k: 1243	n:1930000
DPYS   1930000 perm   1911 sec   (1010 perm/sec)   p_kst 6.440415e-04   p_cons 8.186181e-01   p_joint 6.440415e-04

Joint ci ratio: 1.107500e-01	ci left: 6.096132e-04	ci right 6.815817e-04	k: 1251	n:1940000
Cons ci ratio: 1.324921e-03	ci left: 8.180420e-01	ci right 8.191271e-01	k: 1588055	n:1940000
KS ci ratio: 1.107500e-01	ci left: 6.096132e-04	ci right 6.815817e-04	k: 1251	n:1940000
DPYS   1940000 perm   1929 sec   (1006 perm/sec)   p_kst 6.448454e-04   p_cons 8.185851e-01   p_joint 6.448454e-04

Joint ci ratio: 1.104416e-01	ci left: 6.099774e-04	ci right 6.817754e-04	k: 1258	n:1950000
Cons ci ratio: 1.321332e-03	ci left: 8.180856e-01	ci right 8.191678e-01	k: 1596323	n:1950000
KS ci ratio: 1.104416e-01	ci left: 6.099774e-04	ci right 6.817754e-04	k: 1258	n:1950000
DPYS   1950000 perm   1947 sec   (1002 perm/sec)   p_kst 6.451282e-04   p_cons 8.186272e-01   p_joint 6.451282e-04

Joint ci ratio: 1.100924e-01	ci left: 6.108344e-04	ci right 6.824911e-04	k: 1266	n:1960000
Cons ci ratio: 1.317905e-03	ci left: 8.180986e-01	ci right 8.191780e-01	k: 1604532	n:1960000
KS ci ratio: 1.100924e-01	ci left: 6.108344e-04	ci right 6.824911e-04	k: 1266	n:1960000
DPYS   1960000 perm   1965 sec   (997 perm/sec)   p_kst 6.459184e-04   p_cons 8.186388e-01   p_joint 6.459184e-04

Joint ci ratio: 1.098326e-01	ci left: 6.106956e-04	ci right 6.821561e-04	k: 1272	n:1970000
Cons ci ratio: 1.314541e-03	ci left: 8.181034e-01	ci right 8.191800e-01	k: 1612725	n:1970000
KS ci ratio: 1.098326e-01	ci left: 6.106956e-04	ci right 6.821561e-04	k: 1272	n:1970000
DPYS   1970000 perm   1984 sec   (993 perm/sec)   p_kst 6.456853e-04   p_cons 8.186421e-01   p_joint 6.456853e-04

Joint ci ratio: 1.094464e-01	ci left: 6.120321e-04	ci right 6.833809e-04	k: 1281	n:1980000
Cons ci ratio: 1.311234e-03	ci left: 8.181010e-01	ci right 8.191749e-01	k: 1620904	n:1980000
KS ci ratio: 1.094464e-01	ci left: 6.120321e-04	ci right 6.833809e-04	k: 1281	n:1980000
DPYS   1980000 perm   2002 sec   (989 perm/sec)   p_kst 6.469697e-04   p_cons 8.186384e-01   p_joint 6.469697e-04

Joint ci ratio: 1.092761e-01	ci left: 6.109116e-04	ci right 6.820119e-04	k: 1285	n:1990000
Cons ci ratio: 1.307916e-03	ci left: 8.181067e-01	ci right 8.191778e-01	k: 1629099	n:1990000
KS ci ratio: 1.092761e-01	ci left: 6.109116e-04	ci right 6.820119e-04	k: 1285	n:1990000
DPYS   1990000 perm   2021 sec   (985 perm/sec)   p_kst 6.457286e-04   p_cons 8.186427e-01   p_joint 6.457286e-04

Joint ci ratio: 1.091913e-01	ci left: 6.088297e-04	ci right 6.796292e-04	k: 1287	n:2000000
Cons ci ratio: 1.304716e-03	ci left: 8.180913e-01	ci right 8.191598e-01	k: 1637252	n:2000000
KS ci ratio: 1.091913e-01	ci left: 6.088297e-04	ci right 6.796292e-04	k: 1287	n:2000000
DPYS   2000000 perm   2040 sec   (981 perm/sec)   p_kst 6.435000e-04   p_cons 8.186260e-01   p_joint 6.435000e-04

Joint ci ratio: 1.090645e-01	ci left: 6.072525e-04	ci right 6.777812e-04	k: 1290	n:2010000
Cons ci ratio: 1.301550e-03	ci left: 8.180735e-01	ci right 8.191395e-01	k: 1645400	n:2010000
KS ci ratio: 1.090645e-01	ci left: 6.072525e-04	ci right 6.777812e-04	k: 1290	n:2010000
DPYS   2010000 perm   2058 sec   (977 perm/sec)   p_kst 6.417910e-04   p_cons 8.186070e-01   p_joint 6.417910e-04

Joint ci ratio: 1.085610e-01	ci left: 6.100252e-04	ci right 6.805280e-04	k: 1302	n:2020000
Cons ci ratio: 1.298424e-03	ci left: 8.180520e-01	ci right 8.191154e-01	k: 1653540	n:2020000
KS ci ratio: 1.085610e-01	ci left: 6.100252e-04	ci right 6.805280e-04	k: 1302	n:2020000
DPYS   2020000 perm   2077 sec   (973 perm/sec)   p_kst 6.445545e-04   p_cons 8.185842e-01   p_joint 6.445545e-04

Joint ci ratio: 1.083119e-01	ci left: 6.098957e-04	ci right 6.802115e-04	k: 1308	n:2030000
Cons ci ratio: 1.295243e-03	ci left: 8.180485e-01	ci right 8.191092e-01	k: 1661716	n:2030000
KS ci ratio: 1.083119e-01	ci left: 6.098957e-04	ci right 6.802115e-04	k: 1308	n:2030000
DPYS   2030000 perm   2096 sec   (968 perm/sec)   p_kst 6.443350e-04   p_cons 8.185793e-01   p_joint 6.443350e-04

Joint ci ratio: 1.081468e-01	ci left: 6.088137e-04	ci right 6.788910e-04	k: 1312	n:2040000
Cons ci ratio: 1.292036e-03	ci left: 8.180563e-01	ci right 8.191144e-01	k: 1669915	n:2040000
KS ci ratio: 1.081468e-01	ci left: 6.088137e-04	ci right 6.788910e-04	k: 1312	n:2040000
DPYS   2040000 perm   2116 sec   (964 perm/sec)   p_kst 6.431373e-04   p_cons 8.185858e-01   p_joint 6.431373e-04

Joint ci ratio: 1.079825e-01	ci left: 6.077423e-04	ci right 6.775833e-04	k: 1316	n:2050000
Cons ci ratio: 1.288912e-03	ci left: 8.180503e-01	ci right 8.191059e-01	k: 1678086	n:2050000
KS ci ratio: 1.079825e-01	ci left: 6.077423e-04	ci right 6.775833e-04	k: 1316	n:2050000
DPYS   2050000 perm   2135 sec   (960 perm/sec)   p_kst 6.419512e-04   p_cons 8.185785e-01   p_joint 6.419512e-04

Joint ci ratio: 1.075343e-01	ci left: 6.099881e-04	ci right 6.797776e-04	k: 1327	n:2060000
Cons ci ratio: 1.285891e-03	ci left: 8.180259e-01	ci right 8.190790e-01	k: 1686219	n:2060000
KS ci ratio: 1.075343e-01	ci left: 6.099881e-04	ci right 6.797776e-04	k: 1327	n:2060000
DPYS   2060000 perm   2154 sec   (956 perm/sec)   p_kst 6.441748e-04   p_cons 8.185529e-01   p_joint 6.441748e-04

Joint ci ratio: 1.073727e-01	ci left: 6.089217e-04	ci right 6.784780e-04	k: 1331	n:2070000
Cons ci ratio: 1.282791e-03	ci left: 8.180250e-01	ci right 8.190755e-01	k: 1694400	n:2070000
KS ci ratio: 1.073727e-01	ci left: 6.089217e-04	ci right 6.784780e-04	k: 1331	n:2070000
DPYS   2070000 perm   2173 sec   (953 perm/sec)   p_kst 6.429952e-04   p_cons 8.185507e-01   p_joint 6.429952e-04

Joint ci ratio: 1.072521e-01	ci left: 6.073977e-04	ci right 6.766971e-04	k: 1334	n:2080000
Cons ci ratio: 1.279661e-03	ci left: 8.180362e-01	ci right 8.190841e-01	k: 1702606	n:2080000
KS ci ratio: 1.072521e-01	ci left: 6.073977e-04	ci right 6.766971e-04	k: 1334	n:2080000
DPYS   2080000 perm   2192 sec   (949 perm/sec)   p_kst 6.413462e-04   p_cons 8.185606e-01   p_joint 6.413462e-04

Joint ci ratio: 1.071720e-01	ci left: 6.054228e-04	ci right 6.744420e-04	k: 1336	n:2090000
Cons ci ratio: 1.276486e-03	ci left: 8.180630e-01	ci right 8.191084e-01	k: 1710845	n:2090000
KS ci ratio: 1.071720e-01	ci left: 6.054228e-04	ci right 6.744420e-04	k: 1336	n:2090000
DPYS   2090000 perm   2212 sec   (945 perm/sec)   p_kst 6.392344e-04   p_cons 8.185861e-01   p_joint 6.392344e-04

Joint ci ratio: 1.068925e-01	ci left: 6.057839e-04	ci right 6.746528e-04	k: 1343	n:2100000
Cons ci ratio: 1.273478e-03	ci left: 8.180562e-01	ci right 8.190991e-01	k: 1719014	n:2100000
KS ci ratio: 1.068925e-01	ci left: 6.057839e-04	ci right 6.746528e-04	k: 1343	n:2100000
DPYS   2100000 perm   2232 sec   (941 perm/sec)   p_kst 6.395238e-04   p_cons 8.185781e-01   p_joint 6.395238e-04

Joint ci ratio: 1.066152e-01	ci left: 6.061419e-04	ci right 6.748615e-04	k: 1350	n:2110000
Cons ci ratio: 1.270393e-03	ci left: 8.180723e-01	ci right 8.191126e-01	k: 1727231	n:2110000
KS ci ratio: 1.066152e-01	ci left: 6.061419e-04	ci right 6.748615e-04	k: 1350	n:2110000
DPYS   2110000 perm   2251 sec   (937 perm/sec)   p_kst 6.398104e-04   p_cons 8.185929e-01   p_joint 6.398104e-04

Joint ci ratio: 1.063009e-01	ci left: 6.069558e-04	ci right 6.755522e-04	k: 1358	n:2120000
Cons ci ratio: 1.267429e-03	ci left: 8.180650e-01	ci right 8.191030e-01	k: 1735399	n:2120000
KS ci ratio: 1.063009e-01	ci left: 6.069558e-04	ci right 6.755522e-04	k: 1358	n:2120000
DPYS   2120000 perm   2271 sec   (934 perm/sec)   p_kst 6.405660e-04   p_cons 8.185844e-01   p_joint 6.405660e-04

Joint ci ratio: 1.060282e-01	ci left: 6.073054e-04	ci right 6.757542e-04	k: 1365	n:2130000
Cons ci ratio: 1.264383e-03	ci left: 8.180823e-01	ci right 8.191178e-01	k: 1743619	n:2130000
KS ci ratio: 1.060282e-01	ci left: 6.073054e-04	ci right 6.757542e-04	k: 1365	n:2130000
DPYS   2130000 perm   2291 sec   (930 perm/sec)   p_kst 6.408451e-04   p_cons 8.186005e-01   p_joint 6.408451e-04

Joint ci ratio: 1.057575e-01	ci left: 6.076519e-04	ci right 6.759541e-04	k: 1372	n:2140000
Cons ci ratio: 1.261403e-03	ci left: 8.180887e-01	ci right 8.191217e-01	k: 1751816	n:2140000
KS ci ratio: 1.057575e-01	ci left: 6.076519e-04	ci right 6.759541e-04	k: 1372	n:2140000
DPYS   2140000 perm   2310 sec   (926 perm/sec)   p_kst 6.411215e-04   p_cons 8.186056e-01   p_joint 6.411215e-04

Joint ci ratio: 1.054507e-01	ci left: 6.084483e-04	ci right 6.766293e-04	k: 1380	n:2150000
Cons ci ratio: 1.258620e-03	ci left: 8.180535e-01	ci right 8.190842e-01	k: 1759924	n:2150000
KS ci ratio: 1.054507e-01	ci left: 6.084483e-04	ci right 6.766293e-04	k: 1380	n:2150000
DPYS   2150000 perm   2330 sec   (923 perm/sec)   p_kst 6.418605e-04   p_cons 8.185693e-01   p_joint 6.418605e-04

Joint ci ratio: 1.052984e-01	ci left: 6.074344e-04	ci right 6.753974e-04	k: 1384	n:2160000
Cons ci ratio: 1.255646e-03	ci left: 8.180683e-01	ci right 8.190966e-01	k: 1768139	n:2160000
KS ci ratio: 1.052984e-01	ci left: 6.074344e-04	ci right 6.753974e-04	k: 1384	n:2160000
DPYS   2160000 perm   2350 sec   (919 perm/sec)   p_kst 6.407407e-04   p_cons 8.185829e-01   p_joint 6.407407e-04

Joint ci ratio: 1.050333e-01	ci left: 6.077762e-04	ci right 6.755956e-04	k: 1391	n:2170000
Cons ci ratio: 1.252834e-03	ci left: 8.180493e-01	ci right 8.190752e-01	k: 1776281	n:2170000
KS ci ratio: 1.050333e-01	ci left: 6.077762e-04	ci right 6.755956e-04	k: 1391	n:2170000
DPYS   2170000 perm   2370 sec   (916 perm/sec)   p_kst 6.410138e-04   p_cons 8.185627e-01   p_joint 6.410138e-04

Joint ci ratio: 1.047702e-01	ci left: 6.081150e-04	ci right 6.757918e-04	k: 1398	n:2180000
Cons ci ratio: 1.249980e-03	ci left: 8.180451e-01	ci right 8.190687e-01	k: 1784455	n:2180000
KS ci ratio: 1.047702e-01	ci left: 6.081150e-04	ci right 6.757918e-04	k: 1398	n:2180000
DPYS   2180000 perm   2390 sec   (912 perm/sec)   p_kst 6.412844e-04   p_cons 8.185573e-01   p_joint 6.412844e-04

Joint ci ratio: 1.044719e-01	ci left: 6.088956e-04	ci right 6.764544e-04	k: 1406	n:2190000
Cons ci ratio: 1.247264e-03	ci left: 8.180126e-01	ci right 8.190340e-01	k: 1792567	n:2190000
KS ci ratio: 1.044719e-01	ci left: 6.088956e-04	ci right 6.764544e-04	k: 1406	n:2190000
DPYS   2190000 perm   2411 sec   (908 perm/sec)   p_kst 6.420091e-04   p_cons 8.185237e-01   p_joint 6.420091e-04

Joint ci ratio: 1.042498e-01	ci left: 6.087840e-04	ci right 6.761781e-04	k: 1412	n:2200000
Cons ci ratio: 1.244411e-03	ci left: 8.180173e-01	ci right 8.190364e-01	k: 1800760	n:2200000
KS ci ratio: 1.042498e-01	ci left: 6.087840e-04	ci right 6.761781e-04	k: 1412	n:2200000
DPYS   2200000 perm   2431 sec   (905 perm/sec)   p_kst 6.418182e-04   p_cons 8.185273e-01   p_joint 6.418182e-04

Joint ci ratio: 1.039925e-01	ci left: 6.091142e-04	ci right 6.763683e-04	k: 1419	n:2210000
Cons ci ratio: 1.241726e-03	ci left: 8.179867e-01	ci right 8.190034e-01	k: 1808875	n:2210000
KS ci ratio: 1.039925e-01	ci left: 6.091142e-04	ci right 6.763683e-04	k: 1419	n:2210000
DPYS   2210000 perm   2452 sec   (901 perm/sec)   p_kst 6.420814e-04   p_cons 8.184955e-01   p_joint 6.420814e-04

Joint ci ratio: 1.038464e-01	ci left: 6.081254e-04	ci right 6.751703e-04	k: 1423	n:2220000
Cons ci ratio: 1.238832e-03	ci left: 8.180104e-01	ci right 8.190248e-01	k: 1817110	n:2220000
KS ci ratio: 1.038464e-01	ci left: 6.081254e-04	ci right 6.751703e-04	k: 1423	n:2220000
DPYS   2220000 perm   2473 sec   (898 perm/sec)   p_kst 6.409910e-04   p_cons 8.185180e-01   p_joint 6.409910e-04

Joint ci ratio: 1.035198e-01	ci left: 6.093297e-04	ci right 6.762831e-04	k: 1432	n:2230000
Cons ci ratio: 1.236119e-03	ci left: 8.179953e-01	ci right 8.190075e-01	k: 1825259	n:2230000
KS ci ratio: 1.035198e-01	ci left: 6.093297e-04	ci right 6.762831e-04	k: 1432	n:2230000
DPYS   2230000 perm   2493 sec   (895 perm/sec)   p_kst 6.421525e-04   p_cons 8.185018e-01   p_joint 6.421525e-04

Joint ci ratio: 1.033756e-01	ci left: 6.083489e-04	ci right 6.750959e-04	k: 1436	n:2240000
Cons ci ratio: 1.233403e-03	ci left: 8.179852e-01	ci right 8.189952e-01	k: 1833419	n:2240000
KS ci ratio: 1.033756e-01	ci left: 6.083489e-04	ci right 6.750959e-04	k: 1436	n:2240000
DPYS   2240000 perm   2514 sec   (891 perm/sec)   p_kst 6.410714e-04   p_cons 8.184906e-01   p_joint 6.410714e-04

Joint ci ratio: 1.030891e-01	ci left: 6.091089e-04	ci right 6.757427e-04	k: 1444	n:2250000
Cons ci ratio: 1.230708e-03	ci left: 8.179744e-01	ci right 8.189821e-01	k: 1841577	n:2250000
KS ci ratio: 1.030891e-01	ci left: 6.091089e-04	ci right 6.757427e-04	k: 1444	n:2250000
DPYS   2250000 perm   2535 sec   (888 perm/sec)   p_kst 6.417778e-04   p_cons 8.184787e-01   p_joint 6.417778e-04

Joint ci ratio: 1.029467e-01	ci left: 6.081381e-04	ci right 6.745682e-04	k: 1448	n:2260000
Cons ci ratio: 1.227940e-03	ci left: 8.179858e-01	ci right 8.189913e-01	k: 1849785	n:2260000
KS ci ratio: 1.029467e-01	ci left: 6.081381e-04	ci right 6.745682e-04	k: 1448	n:2260000
DPYS   2260000 perm   2555 sec   (884 perm/sec)   p_kst 6.407080e-04   p_cons 8.184889e-01   p_joint 6.407080e-04

Joint ci ratio: 1.026637e-01	ci left: 6.088927e-04	ci right 6.752114e-04	k: 1456	n:2270000
Cons ci ratio: 1.225132e-03	ci left: 8.180112e-01	ci right 8.190144e-01	k: 1858025	n:2270000
KS ci ratio: 1.026637e-01	ci left: 6.088927e-04	ci right 6.752114e-04	k: 1456	n:2270000
DPYS   2270000 perm   2576 sec   (881 perm/sec)   p_kst 6.414097e-04   p_cons 8.185132e-01   p_joint 6.414097e-04

Joint ci ratio: 1.024880e-01	ci left: 6.083588e-04	ci right 6.744992e-04	k: 1461	n:2280000
Cons ci ratio: 1.222526e-03	ci left: 8.179921e-01	ci right 8.189931e-01	k: 1866164	n:2280000
KS ci ratio: 1.024880e-01	ci left: 6.083588e-04	ci right 6.744992e-04	k: 1461	n:2280000
DPYS   2280000 perm   2597 sec   (878 perm/sec)   p_kst 6.407895e-04   p_cons 8.184930e-01   p_joint 6.407895e-04

Joint ci ratio: 1.023481e-01	ci left: 6.074042e-04	ci right 6.733452e-04	k: 1465	n:2290000
Cons ci ratio: 1.219882e-03	ci left: 8.179862e-01	ci right 8.189851e-01	k: 1874333	n:2290000
KS ci ratio: 1.023481e-01	ci left: 6.074042e-04	ci right 6.733452e-04	k: 1465	n:2290000
DPYS   2290000 perm   2618 sec   (875 perm/sec)   p_kst 6.397380e-04   p_cons 8.184860e-01   p_joint 6.397380e-04

Joint ci ratio: 1.020700e-01	ci left: 6.081526e-04	ci right 6.739848e-04	k: 1473	n:2300000
Cons ci ratio: 1.217279e-03	ci left: 8.179747e-01	ci right 8.189714e-01	k: 1882489	n:2300000
KS ci ratio: 1.020700e-01	ci left: 6.081526e-04	ci right 6.739848e-04	k: 1473	n:2300000
DPYS   2300000 perm   2640 sec   (871 perm/sec)   p_kst 6.404348e-04   p_cons 8.184735e-01   p_joint 6.404348e-04

Joint ci ratio: 1.018973e-01	ci left: 6.076292e-04	ci right 6.732868e-04	k: 1478	n:2310000
Cons ci ratio: 1.214595e-03	ci left: 8.179872e-01	ci right 8.189817e-01	k: 1890700	n:2310000
KS ci ratio: 1.018973e-01	ci left: 6.076292e-04	ci right 6.732868e-04	k: 1478	n:2310000
DPYS   2310000 perm   2661 sec   (868 perm/sec)   p_kst 6.398268e-04   p_cons 8.184848e-01   p_joint 6.398268e-04

Joint ci ratio: 1.016570e-01	ci left: 6.079506e-04	ci right 6.734787e-04	k: 1485	n:2320000
Cons ci ratio: 1.212016e-03	ci left: 8.179780e-01	ci right 8.189704e-01	k: 1898861	n:2320000
KS ci ratio: 1.016570e-01	ci left: 6.079506e-04	ci right 6.734787e-04	k: 1485	n:2320000
DPYS   2320000 perm   2682 sec   (865 perm/sec)   p_kst 6.400862e-04   p_cons 8.184746e-01   p_joint 6.400862e-04

Joint ci ratio: 1.012828e-01	ci left: 6.099426e-04	ci right 6.754290e-04	k: 1496	n:2330000
Cons ci ratio: 1.209494e-03	ci left: 8.179589e-01	ci right 8.189493e-01	k: 1906999	n:2330000
KS ci ratio: 1.012828e-01	ci left: 6.099426e-04	ci right 6.754290e-04	k: 1496	n:2330000
DPYS   2330000 perm   2704 sec   (862 perm/sec)   p_kst 6.420601e-04   p_cons 8.184545e-01   p_joint 6.420601e-04

Joint ci ratio: 1.011141e-01	ci left: 6.094187e-04	ci right 6.747334e-04	k: 1501	n:2340000
Cons ci ratio: 1.206908e-03	ci left: 8.179598e-01	ci right 8.189480e-01	k: 1915183	n:2340000
KS ci ratio: 1.011141e-01	ci left: 6.094187e-04	ci right 6.747334e-04	k: 1501	n:2340000
DPYS   2340000 perm   2725 sec   (859 perm/sec)   p_kst 6.414530e-04   p_cons 8.184543e-01   p_joint 6.414530e-04

Joint ci ratio: 1.009127e-01	ci left: 6.093141e-04	ci right 6.744798e-04	k: 1507	n:2350000
Cons ci ratio: 1.204398e-03	ci left: 8.179457e-01	ci right 8.189318e-01	k: 1923332	n:2350000
KS ci ratio: 1.009127e-01	ci left: 6.093141e-04	ci right 6.744798e-04	k: 1507	n:2350000
DPYS   2350000 perm   2747 sec   (855 perm/sec)   p_kst 6.412766e-04   p_cons 8.184391e-01   p_joint 6.412766e-04

Joint ci ratio: 1.008126e-01	ci left: 6.079714e-04	ci right 6.729251e-04	k: 1510	n:2360000
Cons ci ratio: 1.201879e-03	ci left: 8.179381e-01	ci right 8.189221e-01	k: 1931496	n:2360000
KS ci ratio: 1.008126e-01	ci left: 6.079714e-04	ci right 6.729251e-04	k: 1510	n:2360000
DPYS   2360000 perm   2769 sec   (852 perm/sec)   p_kst 6.398305e-04   p_cons 8.184305e-01   p_joint 6.398305e-04

Joint ci ratio: 1.006462e-01	ci left: 6.074626e-04	ci right 6.722486e-04	k: 1515	n:2370000
Cons ci ratio: 1.199270e-03	ci left: 8.179567e-01	ci right 8.189387e-01	k: 1939722	n:2370000
KS ci ratio: 1.006462e-01	ci left: 6.074626e-04	ci right 6.722486e-04	k: 1515	n:2370000
DPYS   2370000 perm   2790 sec   (849 perm/sec)   p_kst 6.392405e-04   p_cons 8.184481e-01   p_joint 6.392405e-04

Joint ci ratio: 1.004146e-01	ci left: 6.077775e-04	ci right 6.724391e-04	k: 1522	n:2380000
Cons ci ratio: 1.196801e-03	ci left: 8.179445e-01	ci right 8.189244e-01	k: 1947875	n:2380000
KS ci ratio: 1.004146e-01	ci left: 6.077775e-04	ci right 6.724391e-04	k: 1522	n:2380000
DPYS   2380000 perm   2812 sec   (846 perm/sec)   p_kst 6.394958e-04   p_cons 8.184349e-01   p_joint 6.394958e-04

Joint ci ratio: 1.001192e-01	ci left: 6.089058e-04	ci right 6.734857e-04	k: 1531	n:2390000
Cons ci ratio: 1.194403e-03	ci left: 8.179186e-01	ci right 8.188965e-01	k: 1955995	n:2390000
KS ci ratio: 1.001192e-01	ci left: 6.089058e-04	ci right 6.734857e-04	k: 1531	n:2390000
DPYS   2390000 perm   2834 sec   (843 perm/sec)   p_kst 6.405858e-04   p_cons 8.184079e-01   p_joint 6.405858e-04

Joint ci ratio: 9.989123e-02	ci left: 6.092124e-04	ci right 6.736691e-04	k: 1538	n:2400000
Cons ci ratio: 1.192022e-03	ci left: 8.178921e-01	ci right 8.188680e-01	k: 1964113	n:2400000
KS ci ratio: 9.989123e-02	ci left: 6.092124e-04	ci right 6.736691e-04	k: 1538	n:2400000
DPYS   2400000 perm   2856 sec   (840 perm/sec)   p_kst 6.408333e-04   p_cons 8.183804e-01   p_joint 6.408333e-04

Outputting figure to mutsig2_images.part000000000052/DPYS.2_1596_2400000_0.00064083_0.81838_0.00064083.png
                gene_name: DPYS
               theta_stop: 0.100 
                    nperm: 2400000 
                     p_ks: 0.00064 
        ci_ks_bounds_left: 0.00061 
       ci_ks_bounds_right: 0.00067 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.82 
                  p_joint: 0.00064 
     ci_joint_bounds_left: 0.00061 
    ci_joint_bounds_right: 0.00067 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000052
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 52 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1714>
Subject: Job 8704182: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1714>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000053> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:32 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000053.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000053.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 53  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000053.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    198.57 sec.
    Max Memory :      5955 MB
    Max Swap   :      8446 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
53
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 53
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 53: processing genes 4705 - 4795
Calculating significance of each gene.
Using projection method.
4705	DRD2	1
4706	DRD3	1
4707	DRD4	1
4708	DRD5	1
4709	DRG1	1
4710	DRG2	1
4711	DRGX	1
In gene DRP2 the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 2689    n = 1	mu =   2.44e-07
4712	DRP2	3.013571e-01
4713	DSC1	1
4714	DSC2	1
4715	DSC3	1
4716	DSCAM	1
4717	DSCAML1	1
4718	DSCC1	1
4719	DSCR3	1
4720	DSCR4	1
4721	DSCR6	1
4722	DSE	1.511023e-01
4723	DSEL	1
4724	DSG1	1
4725	DSG2	1
4726	DSG3	2.057868e-01
4727	DSG4	1
4728	DSN1	1
In gene DSP the following bins exceed PROBCAP:
    THCA-EM-A1CW-TP	categ 6	N = 8538    n = 1	mu =   1.37e-07
4729	DSP	3.286876e-01
4730	DSPP	1
4731	DST	1
4732	DSTN	1
In gene DSTYK the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 2643    n = 1	mu =   1.44e-07
4733	DSTYK	6.916474e-02
4734	DTD1	1
4735	DTL	7.142640e-02
4736	DTNA	2.939110e-01
4737	DTNB	1.960620e-01
4738	DTNBP1	1.092484e-01
4739	DTWD1	1
4740	DTWD2	1
4741	DTX1	2.099933e-01
4742	DTX2	1
4743	DTX3	1
4744	DTX3L	1
4745	DTX4	1
4746	DTYMK	2.633394e-02
4747	DULLARD	1
4748	DUOX1	1
In gene DUOX2 the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 3948    n = 1	mu =   1.44e-07
4749	DUOX2	1.491342e-01
4750	DUOXA1	1
4751	DUOXA2	1
4752	DUPD1	1
4753	DUS1L	1
4754	DUS2L	1.512296e-01
4755	DUS3L	1
4756	DUS4L	1
4757	DUSP1	1
4758	DUSP10	1
4759	DUSP11	1
4760	DUSP12	1
4761	DUSP13	6.440834e-02
4762	DUSP14	1
4763	DUSP15	1
4764	DUSP16	1
4765	DUSP18	1
4766	DUSP19	1
In gene DUSP2 the following bins exceed PROBCAP:
    THCA-BJ-A18Y-TP	categ 6	N = 456     n = 1	mu =   1.74e-07
4767	DUSP2	4.184373e-02
4768	DUSP21	1
4769	DUSP22	1
4770	DUSP23	1
4771	DUSP26	1
4772	DUSP27	1
4773	DUSP28	1
4774	DUSP3	1
4775	DUSP4	1
4776	DUSP5	1.659601e-01
4777	DUSP6	1
4778	DUSP7	1.296421e-01
4779	DUSP8	1
4780	DUSP9	1
4781	DUT	1
4782	DUXA	1
4783	DVL1	1
4784	DVL2	1
4785	DVL3	1
4786	DYDC1	1
4787	DYDC2	1
4788	DYM	1
In gene DYNC1H1 the following bins exceed PROBCAP:
    THCA-EL-A3T6-TP	categ 6	N = 14019   n = 1	mu =   6.83e-08
4789	DYNC1H1	3.335651e-01
In gene DYNC1I1 the following bins exceed PROBCAP:
    THCA-DJ-A2Q1-TP	categ 6	N = 1913    n = 1	mu =   6.96e-08
4790	DYNC1I1	7.411939e-03
4791	DYNC1I2	1
4792	DYNC1LI1	1
4793	DYNC1LI2	5.637469e-02
In gene DYNC2H1 the following bins exceed PROBCAP:
    THCA-EL-A3GO-TP	categ 6	N = 9275    n = 1	mu =   1.02e-07
4794	DYNC2H1	3.110237e-01
4795	DYNC2LI1	1
Done

Running MutSig 2:
Scatter job 53: processing genes 4705 - 4795
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DYNC1H1
Processing conservation and coverage...
70% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.337403e-02	ci left: 7.289600e-01	ci right 7.463014e-01	k: 7377	n:10000
Cons ci ratio: 5.745976e-02	ci left: 3.083805e-01	ci right 3.267259e-01	k: 3175	n:10000
KS ci ratio: 2.589334e-02	ci left: 6.870800e-01	ci right 7.052056e-01	k: 6962	n:10000
DYNC1H1   10000 perm   3 sec   (3166 perm/sec)   p_kst 6.962000e-01   p_cons 3.175000e-01   p_joint 7.377000e-01

Outputting figure to mutsig2_images.part000000000053/DYNC1H1.3_14253_10000_0.6962_0.3175_0.7377.png
                gene_name: DYNC1H1
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.69 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.74 
     ci_joint_bounds_left: 0.73 
    ci_joint_bounds_right: 0.75 

Current progress: 17 percent done.
DSP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.743342e-02	ci left: 8.274759e-01	ci right 8.421285e-01	k: 8349	n:10000
KS ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
DSP   10000 perm   2 sec   (4123 perm/sec)   p_kst 1   p_cons 8.349000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000053/DSP.2_8712_10000_1_0.8349_1.png
                gene_name: DSP
               theta_stop: 0.017 
                    nperm: 10000 
                     p_ks: 1 
        ci_ks_bounds_left: 1.00 
       ci_ks_bounds_right: 1 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.84 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
DSTYK
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 8.069985e-02	ci left: 1.831396e-01	ci right 1.986409e-01	k: 1908	n:10000
KS ci ratio: 3.005121e-02	ci left: 6.202494e-01	ci right 6.392749e-01	k: 6298	n:10000
DSTYK   10000 perm   2 sec   (5905 perm/sec)   p_kst 6.298000e-01   p_cons 1.908000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000053/DSTYK.2_2842_10000_0.6298_0.1908_1.png
                gene_name: DSTYK
               theta_stop: 0.081 
                    nperm: 10000 
                     p_ks: 0.63 
        ci_ks_bounds_left: 0.62 
       ci_ks_bounds_right: 0.64 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.20 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
DUOX2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.922651e-02	ci left: 7.982126e-01	ci right 8.138088e-01	k: 8061	n:10000
KS ci ratio: 4.093336e-02	ci left: 4.684669e-01	ci right 4.881457e-01	k: 4783	n:10000
DUOX2   10000 perm   2 sec   (5157 perm/sec)   p_kst 4.783000e-01   p_cons 8.061000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000053/DUOX2.2_4779_10000_0.4783_0.8061_1.png
                gene_name: DUOX2
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.47 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.81 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.81 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
DYNC1I1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.361522e-02	ci left: 8.861619e-01	ci right 8.984085e-01	k: 8924	n:10000
Cons ci ratio: 1.141455e-02	ci left: 9.164670e-01	ci right 9.270857e-01	k: 9219	n:10000
KS ci ratio: 1.985756e-02	ci left: 7.877635e-01	ci right 8.036639e-01	k: 7958	n:10000
DYNC1I1   10000 perm   2 sec   (6197 perm/sec)   p_kst 7.958000e-01   p_cons 9.219000e-01   p_joint 8.924000e-01

Outputting figure to mutsig2_images.part000000000053/DYNC1I1.2_2002_10000_0.7958_0.9219_0.8924.png
                gene_name: DYNC1I1
               theta_stop: 0.020 
                    nperm: 10000 
                     p_ks: 0.80 
        ci_ks_bounds_left: 0.79 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.93 
                  p_joint: 0.89 
     ci_joint_bounds_left: 0.89 
    ci_joint_bounds_right: 0.90 

Current progress: 83 percent done.
DYNC2H1
Processing conservation and coverage...
75% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.425481e-01	ci left: 6.526833e-02	ci right 7.538371e-02	k: 702	n:10000
Cons ci ratio: 1.522044e-01	ci left: 5.744795e-02	ci right 6.700903e-02	k: 621	n:10000
KS ci ratio: 5.671270e-02	ci left: 3.140359e-01	ci right 3.324672e-01	k: 3232	n:10000
DYNC2H1   10000 perm   3 sec   (3368 perm/sec)   p_kst 3.232000e-01   p_cons 6.210000e-02   p_joint 7.020000e-02

Joint ci ratio: 7.321807e-02	ci left: 1.207415e-01	ci right 1.299677e-01	k: 2506	n:20000
Cons ci ratio: 1.080911e-01	ci left: 5.835555e-02	ci right 6.507257e-02	k: 1233	n:20000
KS ci ratio: 4.018921e-02	ci left: 3.158241e-01	ci right 3.288276e-01	k: 6446	n:20000
DYNC2H1   20000 perm   7 sec   (2947 perm/sec)   p_kst 3.223000e-01   p_cons 6.165000e-02   p_joint 1.253000e-01

Joint ci ratio: 4.299479e-02	ci left: 2.122803e-01	ci right 2.216412e-01	k: 6508	n:30000
Cons ci ratio: 8.830750e-02	ci left: 5.890524e-02	ci right 6.438003e-02	k: 1848	n:30000
KS ci ratio: 3.305242e-02	ci left: 3.138928e-01	ci right 3.244756e-01	k: 9575	n:30000
DYNC2H1   30000 perm   11 sec   (2848 perm/sec)   p_kst 3.191667e-01   p_cons 6.160000e-02   p_joint 2.169333e-01

Outputting figure to mutsig2_images.part000000000053/DYNC2H1.2_13305_30000_0.31917_0.0616_0.21693.png
                gene_name: DYNC2H1
               theta_stop: 0.088 
                    nperm: 30000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.062 
      ci_cons_bounds_left: 0.059 
     ci_cons_bounds_right: 0.064 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.22 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000053
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 53 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1429>
Subject: Job 8704183: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1429>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000054> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:57 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000054.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000054.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 54  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000054.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    252.52 sec.
    Max Memory :      5647 MB
    Max Swap   :      8387 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
54
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 54
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 54: processing genes 4796 - 4885
Calculating significance of each gene.
Using projection method.
4796	DYNLL1	4.164073e-03
4797	DYNLL2	1
4798	DYNLRB1	1
4799	DYNLRB2	1
4800	DYNLT1	5.799425e-02
4801	DYNLT3	1
4802	DYRK1A	1
4803	DYRK1B	1
4804	DYRK2	1
4805	DYRK3	1
4806	DYRK4	2.067652e-02
4807	DYSF	1
4808	DYSFIP1	1
4809	DYTN	1
4810	DYX1C1	1
4811	DZIP1	1
4812	DZIP1L	1
4813	DZIP3	1
4814	E2F1	1
4815	E2F2	1
4816	E2F3	1.820475e-01
4817	E2F4	1
4818	E2F5	1
4819	E2F6	1
4820	E2F7	1
4821	E2F8	3.301807e-01
4822	E4F1	2.666851e-01
4823	EAF1	1
4824	EAF2	1
4825	EAPP	1
4826	EARS2	1
4827	EBAG9	1
4828	EBF1	1.357177e-01
4829	EBF2	6.753593e-02
4830	EBF3	1
4831	EBI3	1.093659e-01
4832	EBLN2	1
4833	EBNA1BP2	1.448608e-01
4834	EBP	1
4835	EBPL	7.847788e-02
4836	ECD	1.959456e-01
4837	ECE1	2.497899e-01
4838	ECE2	1
4839	ECEL1	8.225008e-02
4840	ECH1	1
4841	ECHDC1	1
4842	ECHDC2	5.180606e-02
4843	ECHDC3	1
4844	ECHS1	1
4845	ECM1	1
4846	ECM2	2.381431e-01
4847	ECSCR	1
4848	ECSIT	1.534011e-01
4849	ECT2	1
4850	ECT2L	1
4851	EDA	1
4852	EDA2R	1
4853	EDAR	1
4854	EDARADD	1
4855	EDC3	1
4856	EDC4	1
4857	EDDM3A	1
4858	EDDM3B	2.148884e-02
4859	EDEM1	2.972565e-02
4860	EDEM2	1
4861	EDEM3	1.373295e-01
4862	EDF1	1
4863	EDIL3	1
4864	EDN1	1
4865	EDN2	1
4866	EDN3	1
4867	EDNRA	1
4868	EDNRB	1
4869	EEA1	1
4870	EED	2.122777e-02
4871	EEF1A1	1.200975e-01
4872	EEF1A2	1.961693e-01
4873	EEF1B2	1
4874	EEF1D	1
4875	EEF1E1	1
4876	EEF1G	1
4877	EEF2	1
4878	EEF2K	2.575078e-01
4879	EEFSEC	1
4880	EEPD1	1
4881	EFCAB1	4.449745e-02
4882	EFCAB2	1
4883	EFCAB3	1
4884	EFCAB4A	1
4885	EFCAB4B	1
Done

Running MutSig 2:
Scatter job 54: processing genes 4796 - 4885
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
DYNLT1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.325118e-02	ci left: 4.411130e-01	ci right 4.607156e-01	k: 4509	n:10000
KS ci ratio: 1.123029e-01	ci left: 1.024689e-01	ci right 1.147601e-01	k: 1085	n:10000
DYNLT1   10000 perm   1 sec   (6958 perm/sec)   p_kst 1.085000e-01   p_cons 4.509000e-01   p_joint 1

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 3.097162e-02	ci left: 4.377965e-01	ci right 4.516196e-01	k: 8894	n:20000
KS ci ratio: 8.056057e-02	ci left: 1.015697e-01	ci right 1.101452e-01	k: 2116	n:20000
DYNLT1   20000 perm   6 sec   (3344 perm/sec)   p_kst 1.058000e-01   p_cons 4.447000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000054/DYNLT1.2_362_20000_0.1058_0.4447_1.png
                gene_name: DYNLT1
               theta_stop: 0.081 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.10 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.45 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
DYRK4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.827998e-02	ci left: 5.019507e-01	ci right 5.216425e-01	k: 5118	n:10000
Cons ci ratio: 5.513094e-02	ci left: 3.264433e-01	ci right 3.450525e-01	k: 3357	n:10000
KS ci ratio: 5.041374e-02	ci left: 3.671899e-01	ci right 3.862820e-01	k: 3767	n:10000
DYRK4   10000 perm   2 sec   (6164 perm/sec)   p_kst 3.767000e-01   p_cons 3.357000e-01   p_joint 5.118000e-01

Outputting figure to mutsig2_images.part000000000054/DYRK4.2_1607_10000_0.3767_0.3357_0.5118.png
                gene_name: DYRK4
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.39 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.35 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 50 percent done.
EDEM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.467933e-02	ci left: 5.511066e-01	ci right 5.706579e-01	k: 5609	n:10000
KS ci ratio: 2.497253e-02	ci left: 7.023076e-01	ci right 7.201692e-01	k: 7113	n:10000
EDEM1   10000 perm   2 sec   (6155 perm/sec)   p_kst 7.113000e-01   p_cons 5.609000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000054/EDEM1.2_2022_10000_0.7113_0.5609_1.png
                gene_name: EDEM1
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.71 
        ci_ks_bounds_left: 0.70 
       ci_ks_bounds_right: 0.72 
                   p_cons: 0.56 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.57 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
EED
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.059050e-02	ci left: 4.726625e-01	ci right 4.923477e-01	k: 4825	n:10000
KS ci ratio: 2.292739e-02	ci left: 7.364378e-01	ci right 7.536193e-01	k: 7451	n:10000
EED   10000 perm   2 sec   (6421 perm/sec)   p_kst 7.451000e-01   p_cons 4.825000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000054/EED.2_1378_10000_0.7451_0.4825_1.png
                gene_name: EED
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.75 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.75 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.49 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000054
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 54 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1654>
Subject: Job 8704185: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1654>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000055> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:37:23 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000055.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000055.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 55  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000055.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    305.99 sec.
    Max Memory :      5863 MB
    Max Swap   :      8569 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
55
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 55
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 55: processing genes 4886 - 4976
Calculating significance of each gene.
Using projection method.
4886	EFCAB5	1
4887	EFCAB6	1
4888	EFCAB7	4.633729e-02
4889	EFEMP1	1
4890	EFEMP2	1.958901e-01
4891	EFHA1	1
4892	EFHA2	1
4893	EFHB	1
4894	EFHC1	1
4895	EFHC2	1
4896	EFHD1	1
4897	EFHD2	1
4898	EFNA1	1
4899	EFNA2	1
4900	EFNA3	1
4901	EFNA4	1
4902	EFNA5	1
4903	EFNB1	1
4904	EFNB2	1
4905	EFNB3	1
4906	EFR3A	1
4907	EFS	1.364853e-01
4908	EFTUD1	1
4909	EFTUD2	1.937762e-01
4910	EGF	1
4911	EGFL6	7.312783e-02
4912	EGFL7	1
4913	EGFL8	1
4914	EGFLAM	9.029113e-02
4915	EGFR	1
4916	EGLN1	1
4917	EGLN2	1
4918	EGLN3	1
4919	EGR1	1
4920	EGR2	1
4921	EGR3	1
4922	EGR4	1
4923	EHBP1	1.073287e-01
4924	EHBP1L1	1
4925	EHD1	1.405995e-01
4926	EHD2	1
4927	EHD3	1
4928	EHD4	1
4929	EHF	1
4930	EHHADH	1
4931	EHMT1	1
In gene EHMT2 the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 3604    n = 1	mu =   1.33e-07
4932	EHMT2	2.601519e-01
4933	EI24	1
4934	EID1	1
4935	EID2	1
4936	EID2B	1
4937	EID3	1.310388e-01
4938	EIF1	1
4939	EIF1AD	1
4940	EIF1AX	7.011891e-10
4941	EIF1B	1
4942	EIF2A	1
4943	EIF2AK1	1
4944	EIF2AK2	1
4945	EIF2AK3	1.773790e-01
In gene EIF2AK4 the following bins exceed PROBCAP:
    THCA-EM-A22K-TP	categ 6	N = 5052    n = 1	mu =   1.01e-07
4946	EIF2AK4	3.106508e-01
4947	EIF2B1	1
4948	EIF2B2	1
4949	EIF2B3	1
4950	EIF2B4	1
4951	EIF2B5	1
4952	EIF2C1	1
4953	EIF2C2	2.498108e-01
4954	EIF2C3	1
4955	EIF2C4	1
4956	EIF2S1	1
4957	EIF2S2	9.682890e-02
4958	EIF2S3	1
4959	EIF3A	4.319637e-01
4960	EIF3B	1
4961	EIF3D	2.468319e-01
4962	EIF3E	1
4963	EIF3F	1.490422e-02
4964	EIF3G	1.049971e-01
4965	EIF3H	1
4966	EIF3I	1
4967	EIF3J	1
4968	EIF3K	1
4969	EIF3L	1
4970	EIF3M	1
4971	EIF4A1	1
4972	EIF4A2	1
4973	EIF4A3	1
4974	EIF4B	1
4975	EIF4E	1
4976	EIF4E1B	1
Done

Running MutSig 2:
Scatter job 55: processing genes 4886 - 4976
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
EIF1AX
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.829804e-01	ci left: 1.538312e-03	ci right 3.568919e-03	k: 24	n:10000
Cons ci ratio: 2.549086e-01	ci left: 2.015152e-02	ci right 2.613074e-02	k: 230	n:10000
KS ci ratio: 3.242904e-01	ci left: 1.206533e-02	ci right 1.682370e-02	k: 143	n:10000
EIF1AX   10000 perm   2 sec   (6658 perm/sec)   p_kst 1.430000e-02   p_cons 2.300000e-02   p_joint 2.400000e-03

Joint ci ratio: 3.096304e-01	ci left: 6.720018e-03	ci right 9.226206e-03	k: 158	n:20000
Cons ci ratio: 1.863283e-01	ci left: 1.963004e-02	ci right 2.371068e-02	k: 432	n:20000
KS ci ratio: 2.205424e-01	ci left: 1.383370e-02	ci right 1.730922e-02	k: 310	n:20000
EIF1AX   20000 perm   5 sec   (3824 perm/sec)   p_kst 1.550000e-02   p_cons 2.160000e-02   p_joint 7.900000e-03

Joint ci ratio: 2.888848e-01	ci left: 5.219404e-03	ci right 7.011603e-03	k: 182	n:30000
Cons ci ratio: 1.821674e-01	ci left: 1.381413e-02	ci right 1.661424e-02	k: 455	n:30000
KS ci ratio: 1.795854e-01	ci left: 1.422811e-02	ci right 1.706682e-02	k: 468	n:30000
EIF1AX   30000 perm   7 sec   (4203 perm/sec)   p_kst 1.560000e-02   p_cons 1.516667e-02   p_joint 6.066667e-03

Joint ci ratio: 2.785964e-01	ci left: 4.239341e-03	ci right 5.634023e-03	k: 196	n:40000
Cons ci ratio: 1.554420e-01	ci left: 1.443239e-02	ci right 1.688866e-02	k: 625	n:40000
KS ci ratio: 1.544425e-01	ci left: 1.462475e-02	ci right 1.709626e-02	k: 633	n:40000
EIF1AX   40000 perm   9 sec   (4397 perm/sec)   p_kst 1.582500e-02   p_cons 1.562500e-02   p_joint 4.900000e-03

Joint ci ratio: 2.686527e-01	ci left: 3.670745e-03	ci right 4.827978e-03	k: 211	n:50000
Cons ci ratio: 1.400813e-01	ci left: 1.433888e-02	ci right 1.651791e-02	k: 770	n:50000
KS ci ratio: 1.393488e-01	ci left: 1.449336e-02	ci right 1.668340e-02	k: 778	n:50000
EIF1AX   50000 perm   11 sec   (4479 perm/sec)   p_kst 1.556000e-02   p_cons 1.540000e-02   p_joint 4.220000e-03

Joint ci ratio: 2.596848e-01	ci left: 3.292315e-03	ci right 4.289962e-03	k: 226	n:60000
Cons ci ratio: 1.285269e-01	ci left: 1.428461e-02	ci right 1.626268e-02	k: 915	n:60000
KS ci ratio: 1.275407e-01	ci left: 1.451058e-02	ci right 1.650335e-02	k: 929	n:60000
EIF1AX   60000 perm   13 sec   (4474 perm/sec)   p_kst 1.548333e-02   p_cons 1.525000e-02   p_joint 3.766667e-03

Joint ci ratio: 2.688168e-01	ci left: 2.621762e-03	ci right 3.448856e-03	k: 211	n:70000
Cons ci ratio: 1.193716e-01	ci left: 1.426505e-02	ci right 1.608975e-02	k: 1061	n:70000
KS ci ratio: 1.180247e-01	ci left: 1.459787e-02	ci right 1.644261e-02	k: 1085	n:70000
EIF1AX   70000 perm   16 sec   (4422 perm/sec)   p_kst 1.550000e-02   p_cons 1.515714e-02   p_joint 3.014286e-03

Joint ci ratio: 2.707960e-01	ci left: 2.259018e-03	ci right 2.977809e-03	k: 208	n:80000
Cons ci ratio: 1.121658e-01	ci left: 1.419338e-02	ci right 1.589205e-02	k: 1202	n:80000
KS ci ratio: 1.101833e-01	ci left: 1.471615e-02	ci right 1.644424e-02	k: 1245	n:80000
EIF1AX   80000 perm   19 sec   (4322 perm/sec)   p_kst 1.556250e-02   p_cons 1.502500e-02   p_joint 2.600000e-03

Joint ci ratio: 2.848369e-01	ci left: 1.801201e-03	ci right 2.409384e-03	k: 188	n:90000
Cons ci ratio: 1.054498e-01	ci left: 1.432419e-02	ci right 1.592950e-02	k: 1360	n:90000
KS ci ratio: 1.036848e-01	ci left: 1.482213e-02	ci right 1.645375e-02	k: 1406	n:90000
EIF1AX   90000 perm   21 sec   (4290 perm/sec)   p_kst 1.562222e-02   p_cons 1.511111e-02   p_joint 2.088889e-03

Joint ci ratio: 2.879360e-01	ci left: 1.583927e-03	ci right 2.125621e-03	k: 184	n:100000
Cons ci ratio: 9.931490e-02	ci left: 1.457759e-02	ci right 1.611071e-02	k: 1533	n:100000
KS ci ratio: 9.941368e-02	ci left: 1.454833e-02	ci right 1.607997e-02	k: 1530	n:100000
EIF1AX   100000 perm   24 sec   (4165 perm/sec)   p_kst 1.530000e-02   p_cons 1.533000e-02   p_joint 1.840000e-03

Joint ci ratio: 2.804668e-01	ci left: 1.524357e-03	ci right 2.029765e-03	k: 194	n:110000
Cons ci ratio: 9.530873e-02	ci left: 1.442310e-02	ci right 1.587536e-02	k: 1665	n:110000
KS ci ratio: 9.568852e-02	ci left: 1.430770e-02	ci right 1.575440e-02	k: 1652	n:110000
EIF1AX   110000 perm   27 sec   (4138 perm/sec)   p_kst 1.501818e-02   p_cons 1.513636e-02   p_joint 1.763636e-03

Joint ci ratio: 2.428436e-01	ci left: 1.903693e-03	ci right 2.437490e-03	k: 259	n:120000
Cons ci ratio: 9.154456e-02	ci left: 1.436056e-02	ci right 1.574635e-02	k: 1805	n:120000
KS ci ratio: 9.157030e-02	ci left: 1.435242e-02	ci right 1.573783e-02	k: 1804	n:120000
EIF1AX   120000 perm   29 sec   (4097 perm/sec)   p_kst 1.503333e-02   p_cons 1.504167e-02   p_joint 2.158333e-03

Joint ci ratio: 2.323541e-01	ci left: 1.930888e-03	ci right 2.445568e-03	k: 283	n:130000
Cons ci ratio: 8.810190e-02	ci left: 1.433871e-02	ci right 1.566767e-02	k: 1949	n:130000
KS ci ratio: 8.760155e-02	ci left: 1.450427e-02	ci right 1.584056e-02	k: 1971	n:130000
EIF1AX   130000 perm   32 sec   (4072 perm/sec)   p_kst 1.516154e-02   p_cons 1.499231e-02   p_joint 2.176923e-03

Joint ci ratio: 2.260779e-01	ci left: 1.900688e-03	ci right 2.391726e-03	k: 299	n:140000
Cons ci ratio: 8.522736e-02	ci left: 1.425089e-02	ci right 1.552646e-02	k: 2083	n:140000
KS ci ratio: 8.453009e-02	ci left: 1.448866e-02	ci right 1.577439e-02	k: 2117	n:140000
EIF1AX   140000 perm   35 sec   (4042 perm/sec)   p_kst 1.512143e-02   p_cons 1.487857e-02   p_joint 2.135714e-03

Joint ci ratio: 2.148990e-01	ci left: 1.975542e-03	ci right 2.457356e-03	k: 331	n:150000
Cons ci ratio: 8.220410e-02	ci left: 1.431908e-02	ci right 1.555311e-02	k: 2239	n:150000
KS ci ratio: 8.183402e-02	ci left: 1.444971e-02	ci right 1.568913e-02	k: 2259	n:150000
EIF1AX   150000 perm   38 sec   (3972 perm/sec)   p_kst 1.506000e-02   p_cons 1.492667e-02   p_joint 2.206667e-03

Joint ci ratio: 2.120529e-01	ci left: 1.905306e-03	ci right 2.363035e-03	k: 340	n:160000
Cons ci ratio: 7.968412e-02	ci left: 1.430591e-02	ci right 1.549926e-02	k: 2383	n:160000
KS ci ratio: 7.922990e-02	ci left: 1.447136e-02	ci right 1.567131e-02	k: 2410	n:160000
EIF1AX   160000 perm   41 sec   (3865 perm/sec)   p_kst 1.506250e-02   p_cons 1.489375e-02   p_joint 2.125000e-03

Joint ci ratio: 2.072498e-01	ci left: 1.882403e-03	ci right 2.323088e-03	k: 356	n:170000
Cons ci ratio: 7.736700e-02	ci left: 1.430058e-02	ci right 1.545723e-02	k: 2528	n:170000
KS ci ratio: 7.707363e-02	ci left: 1.441022e-02	ci right 1.557112e-02	k: 2547	n:170000
EIF1AX   170000 perm   44 sec   (3834 perm/sec)   p_kst 1.498235e-02   p_cons 1.487059e-02   p_joint 2.094118e-03

Joint ci ratio: 1.312957e-01	ci left: 4.604128e-03	ci right 5.256418e-03	k: 886	n:180000
Cons ci ratio: 7.542726e-02	ci left: 1.422540e-02	ci right 1.534586e-02	k: 2660	n:180000
KS ci ratio: 7.586249e-02	ci left: 1.406185e-02	ci right 1.517609e-02	k: 2630	n:180000
EIF1AX   180000 perm   47 sec   (3804 perm/sec)   p_kst 1.461111e-02   p_cons 1.477778e-02   p_joint 4.922222e-03

Joint ci ratio: 1.278129e-01	ci left: 4.611343e-03	ci right 5.246012e-03	k: 935	n:190000
Cons ci ratio: 7.347971e-02	ci left: 1.421531e-02	ci right 1.530483e-02	k: 2803	n:190000
KS ci ratio: 7.384138e-02	ci left: 1.407579e-02	ci right 1.516015e-02	k: 2776	n:190000
EIF1AX   190000 perm   50 sec   (3772 perm/sec)   p_kst 1.461053e-02   p_cons 1.475263e-02   p_joint 4.921053e-03

Joint ci ratio: 1.427737e-01	ci left: 3.486839e-03	ci right 4.027701e-03	k: 750	n:200000
Cons ci ratio: 7.152796e-02	ci left: 1.426551e-02	ci right 1.532862e-02	k: 2958	n:200000
KS ci ratio: 7.334821e-02	ci left: 1.356328e-02	ci right 1.460088e-02	k: 2815	n:200000
EIF1AX   200000 perm   54 sec   (3737 perm/sec)   p_kst 1.407500e-02   p_cons 1.479000e-02   p_joint 3.750000e-03

Joint ci ratio: 1.388520e-01	ci left: 3.518352e-03	ci right 4.047872e-03	k: 793	n:210000
Cons ci ratio: 6.983781e-02	ci left: 1.426447e-02	ci right 1.530137e-02	k: 3103	n:210000
KS ci ratio: 7.160264e-02	ci left: 1.356732e-02	ci right 1.457949e-02	k: 2954	n:210000
EIF1AX   210000 perm   57 sec   (3703 perm/sec)   p_kst 1.406667e-02   p_cons 1.477619e-02   p_joint 3.776190e-03

Joint ci ratio: 1.384273e-01	ci left: 3.380349e-03	ci right 3.887413e-03	k: 798	n:220000
Cons ci ratio: 6.826207e-02	ci left: 1.426380e-02	ci right 1.527632e-02	k: 3248	n:220000
KS ci ratio: 6.990733e-02	ci left: 1.359806e-02	ci right 1.458753e-02	k: 3099	n:220000
EIF1AX   220000 perm   60 sec   (3653 perm/sec)   p_kst 1.408636e-02   p_cons 1.476364e-02   p_joint 3.627273e-03

Joint ci ratio: 1.358192e-01	ci left: 3.363534e-03	ci right 3.857802e-03	k: 829	n:230000
Cons ci ratio: 6.703944e-02	ci left: 1.415652e-02	ci right 1.514273e-02	k: 3368	n:230000
KS ci ratio: 6.829498e-02	ci left: 1.363921e-02	ci right 1.460788e-02	k: 3247	n:230000
EIF1AX   230000 perm   64 sec   (3620 perm/sec)   p_kst 1.411739e-02   p_cons 1.464348e-02   p_joint 3.604348e-03

Joint ci ratio: 1.336651e-01	ci left: 3.332090e-03	ci right 3.813355e-03	k: 856	n:240000
Cons ci ratio: 6.571790e-02	ci left: 1.412801e-02	ci right 1.509210e-02	k: 3505	n:240000
KS ci ratio: 6.687923e-02	ci left: 1.364028e-02	ci right 1.458817e-02	k: 3386	n:240000
EIF1AX   240000 perm   67 sec   (3584 perm/sec)   p_kst 1.410833e-02   p_cons 1.460417e-02   p_joint 3.566667e-03

Joint ci ratio: 1.297098e-01	ci left: 3.403832e-03	ci right 3.879790e-03	k: 909	n:250000
Cons ci ratio: 6.441774e-02	ci left: 1.412558e-02	ci right 1.506972e-02	k: 3648	n:250000
KS ci ratio: 6.558577e-02	ci left: 1.362573e-02	ci right 1.455359e-02	k: 3521	n:250000
EIF1AX   250000 perm   70 sec   (3547 perm/sec)   p_kst 1.408400e-02   p_cons 1.459200e-02   p_joint 3.636000e-03

Joint ci ratio: 1.265483e-01	ci left: 3.444172e-03	ci right 3.913153e-03	k: 955	n:260000
Cons ci ratio: 6.310742e-02	ci left: 1.416138e-02	ci right 1.508795e-02	k: 3801	n:260000
KS ci ratio: 6.424884e-02	ci left: 1.366166e-02	ci right 1.457230e-02	k: 3669	n:260000
EIF1AX   260000 perm   74 sec   (3511 perm/sec)   p_kst 1.411154e-02   p_cons 1.461923e-02   p_joint 3.673077e-03

Joint ci ratio: 1.245465e-01	ci left: 3.427817e-03	ci right 3.886642e-03	k: 986	n:270000
Cons ci ratio: 6.184220e-02	ci left: 1.420929e-02	ci right 1.511969e-02	k: 3958	n:270000
KS ci ratio: 6.304911e-02	ci left: 1.366958e-02	ci right 1.456311e-02	k: 3810	n:270000
EIF1AX   270000 perm   78 sec   (3472 perm/sec)   p_kst 1.411111e-02   p_cons 1.465926e-02   p_joint 3.651852e-03

Joint ci ratio: 1.224557e-01	ci left: 3.423072e-03	ci right 3.873012e-03	k: 1020	n:280000
Cons ci ratio: 6.080024e-02	ci left: 1.418359e-02	ci right 1.507649e-02	k: 4095	n:280000
KS ci ratio: 6.193803e-02	ci left: 1.366654e-02	ci right 1.454356e-02	k: 3948	n:280000
EIF1AX   280000 perm   82 sec   (3435 perm/sec)   p_kst 1.410000e-02   p_cons 1.462500e-02   p_joint 3.642857e-03

Joint ci ratio: 1.202953e-01	ci left: 3.428748e-03	ci right 3.870918e-03	k: 1057	n:290000
Cons ci ratio: 5.985948e-02	ci left: 1.413601e-02	ci right 1.501166e-02	k: 4225	n:290000
KS ci ratio: 6.077068e-02	ci left: 1.371478e-02	ci right 1.457773e-02	k: 4101	n:290000
EIF1AX   290000 perm   85 sec   (3399 perm/sec)   p_kst 1.414138e-02   p_cons 1.456897e-02   p_joint 3.644828e-03

Joint ci ratio: 1.185719e-01	ci left: 3.414701e-03	ci right 3.848308e-03	k: 1088	n:300000
Cons ci ratio: 5.888567e-02	ci left: 1.412783e-02	ci right 1.498826e-02	k: 4366	n:300000
KS ci ratio: 5.975245e-02	ci left: 1.372054e-02	ci right 1.456889e-02	k: 4242	n:300000
EIF1AX   300000 perm   89 sec   (3364 perm/sec)   p_kst 1.414000e-02   p_cons 1.455333e-02   p_joint 3.626667e-03

Joint ci ratio: 1.187431e-01	ci left: 3.295147e-03	ci right 3.714219e-03	k: 1085	n:310000
Cons ci ratio: 5.789276e-02	ci left: 1.415208e-02	ci right 1.499897e-02	k: 4517	n:310000
KS ci ratio: 5.876336e-02	ci left: 1.373558e-02	ci right 1.457032e-02	k: 4386	n:310000
EIF1AX   310000 perm   93 sec   (3330 perm/sec)   p_kst 1.414839e-02   p_cons 1.457097e-02   p_joint 3.500000e-03

Joint ci ratio: 1.166140e-01	ci left: 3.313496e-03	ci right 3.726825e-03	k: 1125	n:320000
Cons ci ratio: 5.711626e-02	ci left: 1.409174e-02	ci right 1.492333e-02	k: 4641	n:320000
KS ci ratio: 5.769923e-02	ci left: 1.380831e-02	ci right 1.463177e-02	k: 4549	n:320000
EIF1AX   320000 perm   97 sec   (3295 perm/sec)   p_kst 1.421563e-02   p_cons 1.450313e-02   p_joint 3.515625e-03

Joint ci ratio: 1.144970e-01	ci left: 3.336684e-03	ci right 3.744838e-03	k: 1167	n:330000
Cons ci ratio: 5.628636e-02	ci left: 1.407697e-02	ci right 1.489523e-02	k: 4779	n:330000
KS ci ratio: 5.673974e-02	ci left: 1.385286e-02	ci right 1.466479e-02	k: 4704	n:330000
EIF1AX   330000 perm   101 sec   (3261 perm/sec)   p_kst 1.425455e-02   p_cons 1.448182e-02   p_joint 3.536364e-03

Joint ci ratio: 1.130079e-01	ci left: 3.327127e-03	ci right 3.728467e-03	k: 1198	n:340000
Cons ci ratio: 5.552025e-02	ci left: 1.404864e-02	ci right 1.485378e-02	k: 4912	n:340000
KS ci ratio: 5.589078e-02	ci left: 1.386299e-02	ci right 1.466296e-02	k: 4848	n:340000
EIF1AX   340000 perm   106 sec   (3223 perm/sec)   p_kst 1.425882e-02   p_cons 1.444706e-02   p_joint 3.523529e-03

Joint ci ratio: 1.124970e-01	ci left: 3.262602e-03	ci right 3.654261e-03	k: 1209	n:350000
Cons ci ratio: 5.469119e-02	ci left: 1.406992e-02	ci right 1.486386e-02	k: 5062	n:350000
KS ci ratio: 5.512924e-02	ci left: 1.384727e-02	ci right 1.463509e-02	k: 4983	n:350000
EIF1AX   350000 perm   110 sec   (3171 perm/sec)   p_kst 1.423714e-02   p_cons 1.446286e-02   p_joint 3.454286e-03

Joint ci ratio: 9.085420e-02	ci left: 4.910638e-03	ci right 5.380715e-03	k: 1851	n:360000
Cons ci ratio: 5.395073e-02	ci left: 1.406270e-02	ci right 1.484515e-02	k: 5202	n:360000
KS ci ratio: 5.431734e-02	ci left: 1.387359e-02	ci right 1.465093e-02	k: 5133	n:360000
EIF1AX   360000 perm   115 sec   (3140 perm/sec)   p_kst 1.425833e-02   p_cons 1.445000e-02   p_joint 5.141667e-03

Outputting figure to mutsig2_images.part000000000055/EIF1AX.5_463_360000_0.014258_0.01445_0.0051417.png
                gene_name: EIF1AX
               theta_stop: 0.091 
                    nperm: 360000 
                     p_ks: 0.014 
        ci_ks_bounds_left: 0.014 
       ci_ks_bounds_right: 0.015 
                   p_cons: 0.014 
      ci_cons_bounds_left: 0.014 
     ci_cons_bounds_right: 0.015 
                  p_joint: 0.0051 
     ci_joint_bounds_left: 0.0049 
    ci_joint_bounds_right: 0.0054 

Current progress: 25 percent done.
EHBP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.771862e-02	ci left: 1.948582e-01	ci right 2.107153e-01	k: 2027	n:10000
Cons ci ratio: 5.989282e-02	ci left: 2.908294e-01	ci right 3.088873e-01	k: 2998	n:10000
KS ci ratio: 9.412510e-02	ci left: 1.407993e-01	ci right 1.548065e-01	k: 1477	n:10000
EHBP1   10000 perm   2 sec   (5174 perm/sec)   p_kst 1.477000e-01   p_cons 2.998000e-01   p_joint 2.027000e-01

Outputting figure to mutsig2_images.part000000000055/EHBP1.3_3792_10000_0.1477_0.2998_0.2027.png
                gene_name: EHBP1
               theta_stop: 0.094 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.30 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.31 
                  p_joint: 0.20 
     ci_joint_bounds_left: 0.19 
    ci_joint_bounds_right: 0.21 

Current progress: 50 percent done.
EGFLAM
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.091580e-02	ci left: 7.701294e-01	ci right 7.865082e-01	k: 7784	n:10000
KS ci ratio: 1.222656e-02	ci left: 9.056599e-01	ci right 9.168991e-01	k: 9114	n:10000
EGFLAM   10000 perm   2 sec   (5715 perm/sec)   p_kst 9.114000e-01   p_cons 7.784000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000055/EGFLAM.2_3132_10000_0.9114_0.7784_1.png
                gene_name: EGFLAM
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.79 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
EIF3F
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.472195e-01	ci left: 6.130724e-02	ci right 7.114729e-02	k: 661	n:10000
Cons ci ratio: 5.148235e-02	ci left: 3.574437e-01	ci right 3.764339e-01	k: 3669	n:10000
KS ci ratio: 2.043162e-01	ci left: 3.186407e-02	ci right 3.920972e-02	k: 354	n:10000
EIF3F   10000 perm   2 sec   (6612 perm/sec)   p_kst 3.540000e-02   p_cons 3.669000e-01   p_joint 6.610000e-02

Joint ci ratio: 8.819157e-02	ci left: 8.592160e-02	ci right 9.389809e-02	k: 1797	n:20000
Cons ci ratio: 3.652512e-02	ci left: 3.587213e-01	ci right 3.721179e-01	k: 7308	n:20000
KS ci ratio: 1.439520e-01	ci left: 3.317126e-02	ci right 3.836483e-02	k: 714	n:20000
EIF3F   20000 perm   3 sec   (5868 perm/sec)   p_kst 3.570000e-02   p_cons 3.654000e-01   p_joint 8.985000e-02

Joint ci ratio: 6.593470e-02	ci left: 1.019141e-01	ci right 1.088959e-01	k: 3161	n:30000
Cons ci ratio: 2.960203e-02	ci left: 3.634030e-01	ci right 3.743557e-01	k: 11066	n:30000
KS ci ratio: 1.161132e-01	ci left: 3.447105e-02	ci right 3.875263e-02	k: 1097	n:30000
EIF3F   30000 perm   5 sec   (5590 perm/sec)   p_kst 3.656667e-02   p_cons 3.688667e-01   p_joint 1.053667e-01

Joint ci ratio: 5.697300e-02	ci left: 1.028019e-01	ci right 1.088554e-01	k: 4232	n:40000
Cons ci ratio: 2.553044e-02	ci left: 3.660635e-01	ci right 3.755552e-01	k: 14832	n:40000
KS ci ratio: 9.992147e-02	ci left: 3.519574e-02	ci right 3.892185e-02	k: 1481	n:40000
EIF3F   40000 perm   7 sec   (5419 perm/sec)   p_kst 3.702500e-02   p_cons 3.708000e-01   p_joint 1.058000e-01

Outputting figure to mutsig2_images.part000000000055/EIF3F.2_1106_40000_0.037025_0.3708_0.1058.png
                gene_name: EIF3F
               theta_stop: 0.100 
                    nperm: 40000 
                     p_ks: 0.037 
        ci_ks_bounds_left: 0.035 
       ci_ks_bounds_right: 0.039 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.37 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.10 
    ci_joint_bounds_right: 0.11 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000055
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 55 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1555>
Subject: Job 8704188: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1555>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000056> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 22:49:04 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000056.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000056.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 56  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000056.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  12715.93 sec.
    Max Memory :      5837 MB
    Max Swap   :      8645 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
56
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 56
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 56: processing genes 4977 - 5066
Calculating significance of each gene.
Using projection method.
4977	EIF4E2	1
4978	EIF4E3	1
4979	EIF4EBP1	1
4980	EIF4EBP2	1
4981	EIF4EBP3	1
4982	EIF4ENIF1	3.836011e-01
4983	EIF4G1	4.602518e-01
4984	EIF4G2	3.469004e-01
4985	EIF4G3	3.215496e-01
4986	EIF4H	1
4987	EIF5	1
4988	EIF5A	1
4989	EIF5A2	1
4990	EIF5AL1	1
4991	EIF5B	1
4992	EIF6	1
4993	ELAC1	1
4994	ELAC2	1
4995	ELANE	1
4996	ELAVL1	1
4997	ELAVL2	1
4998	ELAVL3	1
4999	ELAVL4	1
5000/18093 5000	ELF1	1
5001	ELF2	1
5002	ELF3	1.730530e-01
5003	ELF4	1.055810e-01
5004	ELF5	1
5005	ELFN2	4.621939e-02
5006	ELK1	1
5007	ELK3	1
5008	ELK4	1
5009	ELL	1.300330e-01
5010	ELL2	1
5011	ELL3	1
5012	ELMO1	2.026579e-01
5013	ELMO2	1
5014	ELMO3	1
5015	ELMOD1	1
5016	ELMOD2	1
5017	ELMOD3	1
5018	ELN	1
5019	ELOF1	1
5020	ELOVL1	1.258662e-01
5021	ELOVL2	1
5022	ELOVL3	1
5023	ELOVL4	1
5024	ELOVL5	1
5025	ELOVL6	1
5026	ELOVL7	1
In gene ELP2 the following bins exceed PROBCAP:
    THCA-ET-A39L-TP	categ 4	N = 1441    n = 1	mu =   1.40e-07
5027	ELP2	1.191979e-01
5028	ELP3	1
5029	ELP4	1
5030	ELSPBP1	1
5031	ELTD1	1
5032	EMB	1
5033	EMCN	1
5034	EMD	1
5035	EME1	3.392326e-02
5036	EME2	6.132735e-02
In gene EMG1 the following bins exceed PROBCAP:
    THCA-IM-A3EB-TP	categ 6	N = 740     n = 1	mu =   6.71e-08
5037	EMG1	3.951736e-10
5038	EMID1	1
5039	EMID2	1
5040	EMILIN1	1
5041	EMILIN2	1
5042	EMILIN3	1
5043	EML1	1
5044	EML2	1
5045	EML3	1
5046	EML4	1
5047	EML5	1
5048	EMP1	1
5049	EMP2	1
5050	EMP3	1
5051	EMR1	1
5052	EMR2	1
5053	EMR3	1
5054	EMX1	1
5055	EMX2	1
5056	EN1	1
5057	EN2	1
5058	ENAH	1
5059	ENAM	1
5060	ENC1	1
5061	ENDOD1	1
5062	ENDOU	1
5063	ENG	1
5064	ENGASE	2.290451e-01
5065	ENHO	1
5066	ENKUR	1
Done

Running MutSig 2:
Scatter job 56: processing genes 4977 - 5066
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
EMG1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.861344e-01	ci left: 8.233934e-03	ci right 1.225906e-02	k: 101	n:10000
Cons ci ratio: 1.405748e-02	ci left: 8.797106e-01	ci right 8.922635e-01	k: 8861	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
EMG1   10000 perm   2 sec   (5623 perm/sec)   p_kst 1.000000e-04   p_cons 8.861000e-01   p_joint 1.010000e-02

Joint ci ratio: 3.210197e-01	ci left: 6.213270e-03	ci right 8.633254e-03	k: 147	n:20000
Cons ci ratio: 1.004695e-02	ci left: 8.793794e-01	ci right 8.883086e-01	k: 17678	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
EMG1   20000 perm   7 sec   (2855 perm/sec)   p_kst 5.000000e-05   p_cons 8.839000e-01   p_joint 7.350000e-03

Joint ci ratio: 3.697070e-01	ci left: 3.044727e-03	ci right 4.454070e-03	k: 111	n:30000
Cons ci ratio: 8.276076e-03	ci left: 8.783633e-01	ci right 8.856959e-01	k: 26462	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
EMG1   30000 perm   9 sec   (3290 perm/sec)   p_kst 3.333333e-05   p_cons 8.820667e-01   p_joint 3.700000e-03

Joint ci ratio: 3.715487e-01	ci left: 2.260691e-03	ci right 3.313558e-03	k: 110	n:40000
Cons ci ratio: 7.173762e-03	ci left: 8.786718e-01	ci right 8.850227e-01	k: 35275	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
EMG1   40000 perm   11 sec   (3552 perm/sec)   p_kst 2.500000e-05   p_cons 8.818750e-01   p_joint 2.750000e-03

Joint ci ratio: 3.619763e-01	ci left: 1.917428e-03	ci right 2.781975e-03	k: 116	n:50000
Cons ci ratio: 6.393377e-03	ci left: 8.797665e-01	ci right 8.854290e-01	k: 44131	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
EMG1   50000 perm   14 sec   (3701 perm/sec)   p_kst 2.000000e-05   p_cons 8.826200e-01   p_joint 2.320000e-03

Joint ci ratio: 4.106125e-01	ci left: 1.206344e-03	ci right 1.843438e-03	k: 90	n:60000
Cons ci ratio: 5.827457e-03	ci left: 8.803340e-01	ci right 8.854956e-01	k: 52976	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
EMG1   60000 perm   16 sec   (3787 perm/sec)   p_kst 1.666667e-05   p_cons 8.829333e-01   p_joint 1.500000e-03

Joint ci ratio: 3.936933e-01	ci left: 1.136729e-03	ci right 1.705890e-03	k: 98	n:70000
Cons ci ratio: 5.380723e-03	ci left: 8.810859e-01	ci right 8.858537e-01	k: 61844	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
EMG1   70000 perm   18 sec   (3828 perm/sec)   p_kst 1.428571e-05   p_cons 8.834857e-01   p_joint 1.400000e-03

Joint ci ratio: 3.701435e-01	ci left: 1.141550e-03	ci right 1.670671e-03	k: 111	n:80000
Cons ci ratio: 5.016627e-03	ci left: 8.819247e-01	ci right 8.863724e-01	k: 70733	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
EMG1   80000 perm   21 sec   (3849 perm/sec)   p_kst 1.250000e-05   p_cons 8.841625e-01   p_joint 1.387500e-03

Joint ci ratio: 3.637262e-01	ci left: 1.055048e-03	ci right 1.533582e-03	k: 115	n:90000
Cons ci ratio: 4.739354e-03	ci left: 8.816324e-01	ci right 8.858317e-01	k: 79537	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
EMG1   90000 perm   23 sec   (3849 perm/sec)   p_kst 1.111111e-05   p_cons 8.837444e-01   p_joint 1.277778e-03

Joint ci ratio: 3.637499e-01	ci left: 9.495334e-04	ci right 1.380242e-03	k: 115	n:100000
Cons ci ratio: 4.500169e-03	ci left: 8.815559e-01	ci right 8.855419e-01	k: 88356	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
EMG1   100000 perm   26 sec   (3834 perm/sec)   p_kst 1.000000e-05   p_cons 8.835600e-01   p_joint 1.150000e-03

Joint ci ratio: 3.561660e-01	ci left: 9.045523e-04	ci right 1.304321e-03	k: 120	n:110000
Cons ci ratio: 4.171665e-03	ci left: 8.873578e-01	ci right 8.910762e-01	k: 97815	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
EMG1   110000 perm   29 sec   (3812 perm/sec)   p_kst 9.090909e-06   p_cons 8.892273e-01   p_joint 1.090909e-03

Joint ci ratio: 3.462960e-01	ci left: 8.823588e-04	ci right 1.259089e-03	k: 127	n:120000
Cons ci ratio: 3.988696e-03	ci left: 8.877042e-01	ci right 8.912603e-01	k: 106739	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
EMG1   120000 perm   32 sec   (3785 perm/sec)   p_kst 8.333333e-06   p_cons 8.894917e-01   p_joint 1.058333e-03

Joint ci ratio: 3.449641e-01	ci left: 8.215049e-04	ci right 1.170602e-03	k: 128	n:130000
Cons ci ratio: 3.839689e-03	ci left: 8.873883e-01	ci right 8.908097e-01	k: 115584	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
EMG1   130000 perm   35 sec   (3754 perm/sec)   p_kst 7.692308e-06   p_cons 8.891077e-01   p_joint 9.846154e-04

Joint ci ratio: 3.359727e-01	ci left: 8.085508e-04	ci right 1.141248e-03	k: 135	n:140000
Cons ci ratio: 3.708996e-03	ci left: 8.869690e-01	ci right 8.902720e-01	k: 124408	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
EMG1   140000 perm   38 sec   (3718 perm/sec)   p_kst 7.142857e-06   p_cons 8.886286e-01   p_joint 9.642857e-04

Joint ci ratio: 3.518797e-01	ci left: 6.815451e-04	ci right 9.782986e-04	k: 123	n:150000
Cons ci ratio: 3.583502e-03	ci left: 8.870104e-01	ci right 8.902013e-01	k: 133292	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
EMG1   150000 perm   41 sec   (3675 perm/sec)   p_kst 6.666667e-06   p_cons 8.886133e-01   p_joint 8.200000e-04

Joint ci ratio: 3.753388e-01	ci left: 5.537474e-04	ci right 8.148974e-04	k: 108	n:160000
Cons ci ratio: 3.471365e-03	ci left: 8.869664e-01	ci right 8.900570e-01	k: 142163	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
EMG1   160000 perm   44 sec   (3634 perm/sec)   p_kst 6.250000e-06   p_cons 8.885188e-01   p_joint 6.750000e-04

Joint ci ratio: 3.638376e-01	ci left: 5.585272e-04	ci right 8.119455e-04	k: 115	n:170000
Cons ci ratio: 3.372332e-03	ci left: 8.867398e-01	ci right 8.897411e-01	k: 151002	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
EMG1   170000 perm   47 sec   (3589 perm/sec)   p_kst 5.882353e-06   p_cons 8.882471e-01   p_joint 6.764706e-04

Joint ci ratio: 4.276061e-01	ci left: 3.672886e-04	ci right 5.715850e-04	k: 83	n:180000
Cons ci ratio: 3.353452e-03	ci left: 8.821151e-01	ci right 8.850837e-01	k: 159049	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
EMG1   180000 perm   51 sec   (3547 perm/sec)   p_kst 5.555556e-06   p_cons 8.836056e-01   p_joint 4.611111e-04

Joint ci ratio: 4.788185e-01	ci left: 2.686646e-04	ci right 4.419169e-04	k: 66	n:190000
Cons ci ratio: 3.264180e-03	ci left: 8.821442e-01	ci right 8.850336e-01	k: 167883	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
EMG1   190000 perm   54 sec   (3492 perm/sec)   p_kst 5.263158e-06   p_cons 8.835947e-01   p_joint 3.473684e-04

Joint ci ratio: 4.718300e-01	ci left: 2.640327e-04	ci right 4.310114e-04	k: 68	n:200000
Cons ci ratio: 3.185311e-03	ci left: 8.819351e-01	ci right 8.847538e-01	k: 176670	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
EMG1   200000 perm   58 sec   (3439 perm/sec)   p_kst 5.000000e-06   p_cons 8.833500e-01   p_joint 3.400000e-04

Joint ci ratio: 4.525607e-01	ci left: 2.767047e-04	ci right 4.423621e-04	k: 74	n:210000
Cons ci ratio: 3.111380e-03	ci left: 8.817803e-01	ci right 8.845329e-01	k: 185464	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
EMG1   210000 perm   62 sec   (3394 perm/sec)   p_kst 4.761905e-06   p_cons 8.831619e-01   p_joint 3.523810e-04

Joint ci ratio: 4.437729e-01	ci left: 2.762241e-04	ci right 4.374208e-04	k: 77	n:220000
Cons ci ratio: 3.039483e-03	ci left: 8.818369e-01	ci right 8.845258e-01	k: 194301	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
EMG1   220000 perm   66 sec   (3354 perm/sec)   p_kst 4.545455e-06   p_cons 8.831864e-01   p_joint 3.500000e-04

Joint ci ratio: 4.409577e-01	ci left: 2.680775e-04	ci right 4.232323e-04	k: 78	n:230000
Cons ci ratio: 2.974103e-03	ci left: 8.817668e-01	ci right 8.843975e-01	k: 203110	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
EMG1   230000 perm   69 sec   (3316 perm/sec)   p_kst 4.347826e-06   p_cons 8.830870e-01   p_joint 3.391304e-04

Joint ci ratio: 4.381954e-01	ci left: 2.606127e-04	ci right 4.102232e-04	k: 79	n:240000
Cons ci ratio: 2.914705e-03	ci left: 8.815650e-01	ci right 8.841424e-01	k: 211886	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
EMG1   240000 perm   73 sec   (3280 perm/sec)   p_kst 4.166667e-06   p_cons 8.828583e-01   p_joint 3.291667e-04

Joint ci ratio: 4.302036e-01	ci left: 2.608764e-04	ci right 4.071184e-04	k: 82	n:250000
Cons ci ratio: 2.854466e-03	ci left: 8.816894e-01	ci right 8.842137e-01	k: 220739	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
EMG1   250000 perm   77 sec   (3242 perm/sec)   p_kst 4.000000e-06   p_cons 8.829560e-01   p_joint 3.280000e-04

Joint ci ratio: 4.302064e-01	ci left: 2.508424e-04	ci right 3.914606e-04	k: 82	n:260000
Cons ci ratio: 2.799063e-03	ci left: 8.817120e-01	ci right 8.841872e-01	k: 229568	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
EMG1   260000 perm   81 sec   (3206 perm/sec)   p_kst 3.846154e-06   p_cons 8.829538e-01   p_joint 3.153846e-04

Joint ci ratio: 4.226364e-01	ci left: 2.514704e-04	ci right 3.892589e-04	k: 85	n:270000
Cons ci ratio: 2.745977e-03	ci left: 8.817928e-01	ci right 8.842212e-01	k: 238413	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
EMG1   270000 perm   85 sec   (3170 perm/sec)   p_kst 3.703704e-06   p_cons 8.830111e-01   p_joint 3.148148e-04

Joint ci ratio: 4.178070e-01	ci left: 2.488767e-04	ci right 3.832510e-04	k: 87	n:280000
Cons ci ratio: 2.578513e-03	ci left: 8.907871e-01	ci right 8.930905e-01	k: 249744	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
EMG1   280000 perm   89 sec   (3131 perm/sec)   p_kst 3.571429e-06   p_cons 8.919429e-01   p_joint 3.107143e-04

Joint ci ratio: 4.131394e-01	ci left: 2.464702e-04	ci right 3.776493e-04	k: 89	n:290000
Cons ci ratio: 2.533639e-03	ci left: 8.908093e-01	ci right 8.930725e-01	k: 258664	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
EMG1   290000 perm   94 sec   (3095 perm/sec)   p_kst 3.448276e-06   p_cons 8.919448e-01   p_joint 3.068966e-04

Joint ci ratio: 4.131416e-01	ci left: 2.382543e-04	ci right 3.650614e-04	k: 89	n:300000
Cons ci ratio: 2.491158e-03	ci left: 8.908203e-01	ci right 8.930455e-01	k: 267581	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
EMG1   300000 perm   98 sec   (3061 perm/sec)   p_kst 3.333333e-06   p_cons 8.919367e-01   p_joint 2.966667e-04

Joint ci ratio: 4.086269e-01	ci left: 2.363532e-04	ci right 3.604003e-04	k: 91	n:310000
Cons ci ratio: 2.450048e-03	ci left: 8.908859e-01	ci right 8.930745e-01	k: 276515	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
EMG1   310000 perm   102 sec   (3026 perm/sec)   p_kst 3.225806e-06   p_cons 8.919839e-01   p_joint 2.935484e-04

Joint ci ratio: 4.000227e-01	ci left: 2.401960e-04	ci right 3.629023e-04	k: 95	n:320000
Cons ci ratio: 2.413176e-03	ci left: 8.907657e-01	ci right 8.929209e-01	k: 285391	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
EMG1   320000 perm   107 sec   (2993 perm/sec)   p_kst 3.125000e-06   p_cons 8.918469e-01   p_joint 2.968750e-04

Joint ci ratio: 3.919400e-01	ci left: 2.438317e-04	ci right 3.652273e-04	k: 99	n:330000
Cons ci ratio: 2.375004e-03	ci left: 8.908904e-01	ci right 8.930118e-01	k: 294345	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
EMG1   330000 perm   111 sec   (2960 perm/sec)   p_kst 3.030303e-06   p_cons 8.919545e-01   p_joint 3.000000e-04

Joint ci ratio: 3.806841e-01	ci left: 2.525938e-04	ci right 3.738376e-04	k: 105	n:340000
Cons ci ratio: 2.339407e-03	ci left: 8.909401e-01	ci right 8.930297e-01	k: 303276	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
EMG1   340000 perm   116 sec   (2927 perm/sec)   p_kst 2.941176e-06   p_cons 8.919882e-01   p_joint 3.088235e-04

Joint ci ratio: 3.789022e-01	ci left: 2.479611e-04	ci right 3.662854e-04	k: 106	n:350000
Cons ci ratio: 2.306356e-03	ci left: 8.909039e-01	ci right 8.929639e-01	k: 312178	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
EMG1   350000 perm   121 sec   (2894 perm/sec)   p_kst 2.857143e-06   p_cons 8.919371e-01   p_joint 3.028571e-04

Joint ci ratio: 3.771451e-01	ci left: 2.435870e-04	ci right 3.591515e-04	k: 107	n:360000
Cons ci ratio: 2.275420e-03	ci left: 8.908058e-01	ci right 8.928378e-01	k: 321057	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
EMG1   360000 perm   126 sec   (2859 perm/sec)   p_kst 2.777778e-06   p_cons 8.918250e-01   p_joint 2.972222e-04

Joint ci ratio: 3.737013e-01	ci left: 2.418989e-04	ci right 3.553580e-04	k: 109	n:370000
Cons ci ratio: 2.245002e-03	ci left: 8.907730e-01	ci right 8.927777e-01	k: 329958	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
EMG1   370000 perm   131 sec   (2828 perm/sec)   p_kst 2.702703e-06   p_cons 8.917784e-01   p_joint 2.945946e-04

Joint ci ratio: 4.409880e-01	ci left: 1.622553e-04	ci right 2.561712e-04	k: 78	n:380000
Cons ci ratio: 2.214987e-03	ci left: 8.908107e-01	ci right 8.927886e-01	k: 338885	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
EMG1   380000 perm   136 sec   (2798 perm/sec)   p_kst 2.631579e-06   p_cons 8.918026e-01   p_joint 2.052632e-04

Joint ci ratio: 4.328455e-01	ci left: 1.649410e-04	ci right 2.581361e-04	k: 81	n:390000
Cons ci ratio: 2.185592e-03	ci left: 8.908956e-01	ci right 8.928473e-01	k: 347831	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
EMG1   390000 perm   141 sec   (2768 perm/sec)   p_kst 2.564103e-06   p_cons 8.918744e-01   p_joint 2.076923e-04

Joint ci ratio: 4.302307e-01	ci left: 1.630458e-04	ci right 2.544528e-04	k: 82	n:400000
Cons ci ratio: 2.158092e-03	ci left: 8.909086e-01	ci right 8.928358e-01	k: 356750	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
EMG1   400000 perm   146 sec   (2738 perm/sec)   p_kst 2.500000e-06   p_cons 8.918750e-01   p_joint 2.050000e-04

Joint ci ratio: 4.202230e-01	ci left: 1.677811e-04	ci right 2.590407e-04	k: 86	n:410000
Cons ci ratio: 2.132332e-03	ci left: 8.908550e-01	ci right 8.927590e-01	k: 365642	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
EMG1   410000 perm   151 sec   (2707 perm/sec)   p_kst 2.439024e-06   p_cons 8.918098e-01   p_joint 2.097561e-04

Joint ci ratio: 4.355130e-01	ci left: 1.510386e-04	ci right 2.370586e-04	k: 80	n:420000
Cons ci ratio: 2.107732e-03	ci left: 8.907802e-01	ci right 8.926620e-01	k: 374524	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
EMG1   420000 perm   157 sec   (2678 perm/sec)   p_kst 2.380952e-06   p_cons 8.917238e-01   p_joint 1.904762e-04

Joint ci ratio: 4.328498e-01	ci left: 1.495974e-04	ci right 2.341240e-04	k: 81	n:430000
Cons ci ratio: 2.083787e-03	ci left: 8.907253e-01	ci right 8.925857e-01	k: 383413	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
EMG1   430000 perm   162 sec   (2649 perm/sec)   p_kst 2.325581e-06   p_cons 8.916581e-01   p_joint 1.883721e-04

Joint ci ratio: 4.226627e-01	ci left: 1.543096e-04	ci right 2.388669e-04	k: 85	n:440000
Cons ci ratio: 2.059671e-03	ci left: 8.907644e-01	ci right 8.926032e-01	k: 392342	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
EMG1   440000 perm   168 sec   (2621 perm/sec)   p_kst 2.272727e-06   p_cons 8.916864e-01   p_joint 1.931818e-04

Joint ci ratio: 4.178321e-01	ci left: 1.548549e-04	ci right 2.384706e-04	k: 87	n:450000
Cons ci ratio: 2.035224e-03	ci left: 8.909111e-01	ci right 8.927283e-01	k: 401320	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
EMG1   450000 perm   174 sec   (2593 perm/sec)   p_kst 2.222222e-06   p_cons 8.918222e-01   p_joint 1.933333e-04

Joint ci ratio: 4.131634e-01	ci left: 1.553817e-04	ci right 2.380863e-04	k: 89	n:460000
Cons ci ratio: 2.013234e-03	ci left: 8.908966e-01	ci right 8.926941e-01	k: 410227	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
EMG1   460000 perm   179 sec   (2565 perm/sec)   p_kst 2.173913e-06   p_cons 8.917978e-01   p_joint 1.934783e-04

Joint ci ratio: 4.131643e-01	ci left: 1.520757e-04	ci right 2.330208e-04	k: 89	n:470000
Cons ci ratio: 1.992601e-03	ci left: 8.908188e-01	ci right 8.925977e-01	k: 419104	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
EMG1   470000 perm   185 sec   (2538 perm/sec)   p_kst 2.127660e-06   p_cons 8.917106e-01   p_joint 1.893617e-04

Joint ci ratio: 4.108883e-01	ci left: 1.507748e-04	ci right 2.304644e-04	k: 90	n:480000
Cons ci ratio: 1.971376e-03	ci left: 8.908635e-01	ci right 8.926235e-01	k: 428038	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
EMG1   480000 perm   191 sec   (2511 perm/sec)   p_kst 2.083333e-06   p_cons 8.917458e-01   p_joint 1.875000e-04

Joint ci ratio: 4.042779e-01	ci left: 1.531924e-04	ci right 2.325079e-04	k: 93	n:490000
Cons ci ratio: 1.952692e-03	ci left: 8.907201e-01	ci right 8.924631e-01	k: 436881	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
EMG1   490000 perm   197 sec   (2486 perm/sec)   p_kst 2.040816e-06   p_cons 8.915939e-01   p_joint 1.897959e-04

Joint ci ratio: 4.178362e-01	ci left: 1.393691e-04	ci right 2.146240e-04	k: 87	n:500000
Cons ci ratio: 1.932505e-03	ci left: 8.907852e-01	ci right 8.925103e-01	k: 445825	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
EMG1   500000 perm   203 sec   (2462 perm/sec)   p_kst 2.000000e-06   p_cons 8.916500e-01   p_joint 1.740000e-04

Joint ci ratio: 4.178369e-01	ci left: 1.366364e-04	ci right 2.104158e-04	k: 87	n:510000
Cons ci ratio: 1.913785e-03	ci left: 8.907613e-01	ci right 8.924696e-01	k: 454725	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
EMG1   510000 perm   209 sec   (2437 perm/sec)   p_kst 1.960784e-06   p_cons 8.916176e-01   p_joint 1.705882e-04

Joint ci ratio: 4.154832e-01	ci left: 1.357302e-04	ci right 2.084929e-04	k: 88	n:520000
Cons ci ratio: 1.895617e-03	ci left: 8.907364e-01	ci right 8.924284e-01	k: 463624	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
EMG1   520000 perm   216 sec   (2412 perm/sec)   p_kst 1.923077e-06   p_cons 8.915846e-01   p_joint 1.692308e-04

Joint ci ratio: 4.438195e-01	ci left: 1.146567e-04	ci right 1.815756e-04	k: 77	n:530000
Cons ci ratio: 1.878232e-03	ci left: 8.906842e-01	ci right 8.923606e-01	k: 472508	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
EMG1   530000 perm   222 sec   (2388 perm/sec)   p_kst 1.886792e-06   p_cons 8.915245e-01   p_joint 1.452830e-04

Joint ci ratio: 4.438201e-01	ci left: 1.125334e-04	ci right 1.782131e-04	k: 77	n:540000
Cons ci ratio: 1.861637e-03	ci left: 8.906006e-01	ci right 8.922619e-01	k: 481374	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
EMG1   540000 perm   228 sec   (2365 perm/sec)   p_kst 1.851852e-06   p_cons 8.914333e-01   p_joint 1.425926e-04

Joint ci ratio: 4.619458e-01	ci left: 1.008224e-04	ci right 1.628279e-04	k: 71	n:550000
Cons ci ratio: 1.843809e-03	ci left: 8.906952e-01	ci right 8.923407e-01	k: 490336	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
EMG1   550000 perm   235 sec   (2343 perm/sec)   p_kst 1.818182e-06   p_cons 8.915200e-01   p_joint 1.290909e-04

Joint ci ratio: 4.619463e-01	ci left: 9.902198e-05	ci right 1.599203e-04	k: 71	n:560000
Cons ci ratio: 1.827327e-03	ci left: 8.906968e-01	ci right 8.923277e-01	k: 499248	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
EMG1   560000 perm   241 sec   (2321 perm/sec)   p_kst 1.785714e-06   p_cons 8.915143e-01   p_joint 1.267857e-04

Joint ci ratio: 4.496245e-01	ci left: 1.034966e-04	ci right 1.649326e-04	k: 75	n:570000
Cons ci ratio: 1.811311e-03	ci left: 8.906950e-01	ci right 8.923115e-01	k: 508158	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
EMG1   570000 perm   248 sec   (2300 perm/sec)   p_kst 1.754386e-06   p_cons 8.915053e-01   p_joint 1.315789e-04

Joint ci ratio: 4.526130e-01	ci left: 1.001839e-04	ci right 1.601702e-04	k: 74	n:580000
Cons ci ratio: 1.794668e-03	ci left: 8.908057e-01	ci right 8.924076e-01	k: 517133	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
EMG1   580000 perm   255 sec   (2278 perm/sec)   p_kst 1.724138e-06   p_cons 8.916086e-01   p_joint 1.275862e-04

Joint ci ratio: 5.843363e-01	ci left: 5.418774e-05	ci right 1.001139e-04	k: 44	n:590000
Cons ci ratio: 1.779318e-03	ci left: 8.908210e-01	ci right 8.924091e-01	k: 526054	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
EMG1   590000 perm   261 sec   (2257 perm/sec)   p_kst 1.694915e-06   p_cons 8.916169e-01   p_joint 7.457627e-05

Joint ci ratio: 5.717679e-01	ci left: 5.613017e-05	ci right 1.022613e-04	k: 46	n:600000
Cons ci ratio: 1.764415e-03	ci left: 8.908290e-01	ci right 8.924038e-01	k: 534971	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
EMG1   600000 perm   268 sec   (2236 perm/sec)   p_kst 1.666667e-06   p_cons 8.916183e-01   p_joint 7.666667e-05

Joint ci ratio: 5.657805e-01	ci left: 5.661337e-05	ci right 1.024578e-04	k: 47	n:610000
Cons ci ratio: 1.749524e-03	ci left: 8.908764e-01	ci right 8.924379e-01	k: 543912	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
EMG1   610000 perm   275 sec   (2215 perm/sec)   p_kst 1.639344e-06   p_cons 8.916590e-01   p_joint 7.704918e-05

Joint ci ratio: 5.599774e-01	ci left: 5.708346e-05	ci right 1.026455e-04	k: 48	n:620000
Cons ci ratio: 1.735207e-03	ci left: 8.908996e-01	ci right 8.924484e-01	k: 552839	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
EMG1   620000 perm   282 sec   (2195 perm/sec)   p_kst 1.612903e-06   p_cons 8.916758e-01   p_joint 7.741935e-05

Joint ci ratio: 5.599778e-01	ci left: 5.617736e-05	ci right 1.010163e-04	k: 48	n:630000
Cons ci ratio: 1.721730e-03	ci left: 8.908664e-01	ci right 8.924031e-01	k: 561731	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
EMG1   630000 perm   290 sec   (2175 perm/sec)   p_kst 1.587302e-06   p_cons 8.916365e-01   p_joint 7.619048e-05

Joint ci ratio: 5.488875e-01	ci left: 5.798642e-05	ci right 1.029968e-04	k: 50	n:640000
Cons ci ratio: 1.708604e-03	ci left: 8.908295e-01	ci right 8.923544e-01	k: 570620	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
EMG1   640000 perm   297 sec   (2155 perm/sec)   p_kst 1.562500e-06   p_cons 8.915937e-01   p_joint 7.812500e-05

Joint ci ratio: 5.435840e-01	ci left: 5.842031e-05	ci right 1.031612e-04	k: 51	n:650000
Cons ci ratio: 1.694788e-03	ci left: 8.909065e-01	ci right 8.924192e-01	k: 579582	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
EMG1   650000 perm   304 sec   (2136 perm/sec)   p_kst 1.538462e-06   p_cons 8.916646e-01   p_joint 7.846154e-05

Joint ci ratio: 5.435844e-01	ci left: 5.753515e-05	ci right 1.015981e-04	k: 51	n:660000
Cons ci ratio: 1.680840e-03	ci left: 8.910344e-01	ci right 8.925349e-01	k: 588579	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
EMG1   660000 perm   312 sec   (2116 perm/sec)   p_kst 1.515152e-06   p_cons 8.917864e-01   p_joint 7.727273e-05

Joint ci ratio: 5.384317e-01	ci left: 5.796484e-05	ci right 1.017765e-04	k: 52	n:670000
Cons ci ratio: 1.667409e-03	ci left: 8.911376e-01	ci right 8.926262e-01	k: 597562	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
EMG1   670000 perm   319 sec   (2098 perm/sec)   p_kst 1.492537e-06   p_cons 8.918836e-01   p_joint 7.761194e-05

Joint ci ratio: 5.384320e-01	ci left: 5.711240e-05	ci right 1.002798e-04	k: 52	n:680000
Cons ci ratio: 1.654735e-03	ci left: 8.911861e-01	ci right 8.926635e-01	k: 606510	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
EMG1   680000 perm   327 sec   (2080 perm/sec)   p_kst 1.470588e-06   p_cons 8.919265e-01   p_joint 7.647059e-05

Joint ci ratio: 5.843396e-01	ci left: 4.633438e-05	ci right 8.560478e-05	k: 44	n:690000
Cons ci ratio: 1.642197e-03	ci left: 8.912507e-01	ci right 8.927170e-01	k: 615470	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
EMG1   690000 perm   335 sec   (2062 perm/sec)   p_kst 1.449275e-06   p_cons 8.919855e-01   p_joint 6.376812e-05

Joint ci ratio: 3.687326e-01	ci left: 1.317453e-04	ci right 1.925184e-04	k: 112	n:700000
Cons ci ratio: 1.631644e-03	ci left: 8.911115e-01	ci right 8.925681e-01	k: 624289	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
EMG1   700000 perm   342 sec   (2044 perm/sec)   p_kst 1.428571e-06   p_cons 8.918414e-01   p_joint 1.600000e-04

Joint ci ratio: 3.593154e-01	ci left: 1.375677e-04	ci right 1.990270e-04	k: 118	n:710000
Cons ci ratio: 1.621040e-03	ci left: 8.910059e-01	ci right 8.924528e-01	k: 633129	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
EMG1   710000 perm   350 sec   (2026 perm/sec)   p_kst 1.408451e-06   p_cons 8.917310e-01   p_joint 1.661972e-04

Joint ci ratio: 3.593159e-01	ci left: 1.356570e-04	ci right 1.962628e-04	k: 118	n:720000
Cons ci ratio: 1.609202e-03	ci left: 8.910760e-01	ci right 8.925125e-01	k: 642093	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
EMG1   720000 perm   358 sec   (2009 perm/sec)   p_kst 1.388889e-06   p_cons 8.917958e-01   p_joint 1.638889e-04

Joint ci ratio: 3.578157e-01	ci left: 1.350451e-04	ci right 1.950671e-04	k: 119	n:730000
Cons ci ratio: 1.597620e-03	ci left: 8.911443e-01	ci right 8.925704e-01	k: 651057	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
EMG1   730000 perm   366 sec   (1992 perm/sec)   p_kst 1.369863e-06   p_cons 8.918589e-01   p_joint 1.630137e-04

Joint ci ratio: 3.655132e-01	ci left: 1.270772e-04	ci right 1.850631e-04	k: 114	n:740000
Cons ci ratio: 1.586839e-03	ci left: 8.911429e-01	ci right 8.925594e-01	k: 659971	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
EMG1   740000 perm   375 sec   (1976 perm/sec)   p_kst 1.351351e-06   p_cons 8.918527e-01   p_joint 1.540541e-04

Joint ci ratio: 3.754404e-01	ci left: 1.181274e-04	ci right 1.738544e-04	k: 108	n:750000
Cons ci ratio: 1.576002e-03	ci left: 8.911750e-01	ci right 8.925819e-01	k: 668910	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
EMG1   750000 perm   383 sec   (1959 perm/sec)   p_kst 1.333333e-06   p_cons 8.918800e-01   p_joint 1.440000e-04

Joint ci ratio: 3.720425e-01	ci left: 1.189575e-04	ci right 1.744444e-04	k: 110	n:760000
Cons ci ratio: 1.565405e-03	ci left: 8.912037e-01	ci right 8.926012e-01	k: 677847	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
EMG1   760000 perm   391 sec   (1943 perm/sec)   p_kst 1.315789e-06   p_cons 8.919039e-01   p_joint 1.447368e-04

Joint ci ratio: 3.687353e-01	ci left: 1.197683e-04	ci right 1.750170e-04	k: 112	n:770000
Cons ci ratio: 1.555238e-03	ci left: 8.912043e-01	ci right 8.925927e-01	k: 686763	n:770000
KS ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
EMG1   770000 perm   400 sec   (1927 perm/sec)   p_kst 1.298701e-06   p_cons 8.919000e-01   p_joint 1.454545e-04

Joint ci ratio: 3.671146e-01	ci left: 1.193963e-04	ci right 1.741733e-04	k: 113	n:780000
Cons ci ratio: 1.545514e-03	ci left: 8.911741e-01	ci right 8.925537e-01	k: 695655	n:780000
KS ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
EMG1   780000 perm   408 sec   (1912 perm/sec)   p_kst 1.282051e-06   p_cons 8.918654e-01   p_joint 1.448718e-04

Joint ci ratio: 3.671149e-01	ci left: 1.178849e-04	ci right 1.719686e-04	k: 113	n:790000
Cons ci ratio: 1.535970e-03	ci left: 8.911447e-01	ci right 8.925157e-01	k: 704547	n:790000
KS ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
EMG1   790000 perm   417 sec   (1896 perm/sec)   p_kst 1.265823e-06   p_cons 8.918316e-01   p_joint 1.430380e-04

Joint ci ratio: 3.687363e-01	ci left: 1.152769e-04	ci right 1.684540e-04	k: 112	n:800000
Cons ci ratio: 1.526313e-03	ci left: 8.911524e-01	ci right 8.925148e-01	k: 713468	n:800000
KS ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
EMG1   800000 perm   425 sec   (1882 perm/sec)   p_kst 1.250000e-06   p_cons 8.918350e-01   p_joint 1.400000e-04

Joint ci ratio: 4.000594e-01	ci left: 9.489072e-05	ci right 1.433717e-04	k: 95	n:810000
Cons ci ratio: 1.551289e-03	ci left: 8.867381e-01	ci right 8.881159e-01	k: 718817	n:810000
KS ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
EMG1   810000 perm   434 sec   (1867 perm/sec)   p_kst 1.234568e-06   p_cons 8.874284e-01   p_joint 1.172840e-04

Joint ci ratio: 4.000597e-01	ci left: 9.373351e-05	ci right 1.416233e-04	k: 95	n:820000
Cons ci ratio: 1.542057e-03	ci left: 8.867090e-01	ci right 8.880786e-01	k: 727664	n:820000
KS ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
EMG1   820000 perm   443 sec   (1853 perm/sec)   p_kst 1.219512e-06   p_cons 8.873951e-01   p_joint 1.158537e-04

Joint ci ratio: 3.979922e-01	ci left: 9.368809e-05	ci right 1.412421e-04	k: 96	n:830000
Cons ci ratio: 1.532924e-03	ci left: 8.866890e-01	ci right 8.880505e-01	k: 736518	n:830000
KS ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
EMG1   830000 perm   451 sec   (1839 perm/sec)   p_kst 1.204819e-06   p_cons 8.873711e-01   p_joint 1.156627e-04

Joint ci ratio: 3.939514e-01	ci left: 9.471662e-05	ci right 1.421775e-04	k: 98	n:840000
Cons ci ratio: 1.523797e-03	ci left: 8.866899e-01	ci right 8.880432e-01	k: 745389	n:840000
KS ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
EMG1   840000 perm   461 sec   (1824 perm/sec)   p_kst 1.190476e-06   p_cons 8.873679e-01   p_joint 1.166667e-04

Joint ci ratio: 3.919767e-01	ci left: 9.466252e-05	ci right 1.417970e-04	k: 99	n:850000
Cons ci ratio: 1.515125e-03	ci left: 8.866518e-01	ci right 8.879973e-01	k: 754227	n:850000
KS ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
EMG1   850000 perm   470 sec   (1809 perm/sec)   p_kst 1.176471e-06   p_cons 8.873259e-01   p_joint 1.164706e-04

Joint ci ratio: 3.900314e-01	ci left: 9.461026e-05	ci right 1.414247e-04	k: 100	n:860000
Cons ci ratio: 1.506003e-03	ci left: 8.866939e-01	ci right 8.880314e-01	k: 763133	n:860000
KS ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
EMG1   860000 perm   479 sec   (1796 perm/sec)   p_kst 1.162791e-06   p_cons 8.873640e-01   p_joint 1.162791e-04

Joint ci ratio: 3.900317e-01	ci left: 9.352278e-05	ci right 1.397992e-04	k: 100	n:870000
Cons ci ratio: 1.497475e-03	ci left: 8.866774e-01	ci right 8.880073e-01	k: 771989	n:870000
KS ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
EMG1   870000 perm   488 sec   (1783 perm/sec)   p_kst 1.149425e-06   p_cons 8.873437e-01   p_joint 1.149425e-04

Joint ci ratio: 3.862263e-01	ci left: 9.451097e-05	ci right 1.407040e-04	k: 102	n:880000
Cons ci ratio: 1.488929e-03	ci left: 8.866830e-01	ci right 8.880053e-01	k: 780864	n:880000
KS ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
EMG1   880000 perm   497 sec   (1770 perm/sec)   p_kst 1.136364e-06   p_cons 8.873455e-01   p_joint 1.159091e-04

Joint ci ratio: 3.807212e-01	ci left: 9.649491e-05	ci right 1.428172e-04	k: 105	n:890000
Cons ci ratio: 1.480544e-03	ci left: 8.866863e-01	ci right 8.880011e-01	k: 789737	n:890000
KS ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
EMG1   890000 perm   507 sec   (1757 perm/sec)   p_kst 1.123596e-06   p_cons 8.873449e-01   p_joint 1.179775e-04

Joint ci ratio: 3.771793e-01	ci left: 9.743330e-05	ci right 1.436633e-04	k: 107	n:900000
Cons ci ratio: 1.472520e-03	ci left: 8.866594e-01	ci right 8.879670e-01	k: 798583	n:900000
KS ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
EMG1   900000 perm   516 sec   (1744 perm/sec)   p_kst 1.111111e-06   p_cons 8.873144e-01   p_joint 1.188889e-04

Joint ci ratio: 3.771796e-01	ci left: 9.636260e-05	ci right 1.420846e-04	k: 107	n:910000
Cons ci ratio: 1.464280e-03	ci left: 8.866804e-01	ci right 8.879808e-01	k: 807472	n:910000
KS ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
EMG1   910000 perm   525 sec   (1732 perm/sec)   p_kst 1.098901e-06   p_cons 8.873319e-01   p_joint 1.175824e-04

Joint ci ratio: 3.862272e-01	ci left: 9.040176e-05	ci right 1.345865e-04	k: 102	n:920000
Cons ci ratio: 1.456199e-03	ci left: 8.866978e-01	ci right 8.879910e-01	k: 816358	n:920000
KS ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
EMG1   920000 perm   535 sec   (1719 perm/sec)   p_kst 1.086957e-06   p_cons 8.873457e-01   p_joint 1.108696e-04

Joint ci ratio: 3.862275e-01	ci left: 8.942969e-05	ci right 1.331393e-04	k: 102	n:930000
Cons ci ratio: 1.448337e-03	ci left: 8.867030e-01	ci right 8.879892e-01	k: 825233	n:930000
KS ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
EMG1   930000 perm   545 sec   (1707 perm/sec)   p_kst 1.075269e-06   p_cons 8.873473e-01   p_joint 1.096774e-04

Joint ci ratio: 3.807224e-01	ci left: 9.136215e-05	ci right 1.352206e-04	k: 105	n:940000
Cons ci ratio: 1.440195e-03	ci left: 8.867646e-01	ci right 8.880437e-01	k: 834161	n:940000
KS ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
EMG1   940000 perm   555 sec   (1695 perm/sec)   p_kst 1.063830e-06   p_cons 8.874053e-01   p_joint 1.117021e-04

Joint ci ratio: 3.807226e-01	ci left: 9.040044e-05	ci right 1.337973e-04	k: 105	n:950000
Cons ci ratio: 1.432761e-03	ci left: 8.867447e-01	ci right 8.880171e-01	k: 843013	n:950000
KS ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
EMG1   950000 perm   564 sec   (1683 perm/sec)   p_kst 1.052632e-06   p_cons 8.873821e-01   p_joint 1.105263e-04

Joint ci ratio: 3.807228e-01	ci left: 8.945876e-05	ci right 1.324036e-04	k: 105	n:960000
Cons ci ratio: 1.425352e-03	ci left: 8.867378e-01	ci right 8.880036e-01	k: 851877	n:960000
KS ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
EMG1   960000 perm   575 sec   (1671 perm/sec)   p_kst 1.041667e-06   p_cons 8.873719e-01   p_joint 1.093750e-04

Joint ci ratio: 4.355371e-01	ci left: 6.539746e-05	ci right 1.026453e-04	k: 80	n:970000
Cons ci ratio: 1.417932e-03	ci left: 8.867486e-01	ci right 8.880078e-01	k: 860758	n:970000
KS ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
EMG1   970000 perm   585 sec   (1659 perm/sec)   p_kst 1.030928e-06   p_cons 8.873794e-01   p_joint 8.247423e-05

Joint ci ratio: 4.328733e-01	ci left: 6.563899e-05	ci right 1.027292e-04	k: 81	n:980000
Cons ci ratio: 1.410894e-03	ci left: 8.867214e-01	ci right 8.879743e-01	k: 869602	n:980000
KS ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
EMG1   980000 perm   595 sec   (1647 perm/sec)   p_kst 1.020408e-06   p_cons 8.873490e-01   p_joint 8.265306e-05

Joint ci ratio: 5.599859e-01	ci left: 3.574911e-05	ci right 6.428337e-05	k: 48	n:990000
Cons ci ratio: 1.403810e-03	ci left: 8.867159e-01	ci right 8.879626e-01	k: 878467	n:990000
KS ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
EMG1   990000 perm   605 sec   (1635 perm/sec)   p_kst 1.010101e-06   p_cons 8.873404e-01   p_joint 4.848485e-05

Joint ci ratio: 5.543576e-01	ci left: 3.625068e-05	ci right 6.478009e-05	k: 49	n:1000000
Cons ci ratio: 1.396895e-03	ci left: 8.867016e-01	ci right 8.879421e-01	k: 887323	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
EMG1   1000000 perm   616 sec   (1623 perm/sec)   p_kst 1.000000e-06   p_cons 8.873230e-01   p_joint 4.900000e-05

Joint ci ratio: 5.543577e-01	ci left: 3.589176e-05	ci right 6.413871e-05	k: 49	n:1010000
Cons ci ratio: 1.390198e-03	ci left: 8.866708e-01	ci right 8.879052e-01	k: 896162	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
EMG1   1010000 perm   626 sec   (1612 perm/sec)   p_kst 9.900990e-07   p_cons 8.872891e-01   p_joint 4.851485e-05

Joint ci ratio: 5.543579e-01	ci left: 3.553988e-05	ci right 6.350990e-05	k: 49	n:1020000
Cons ci ratio: 1.383258e-03	ci left: 8.866896e-01	ci right 8.879180e-01	k: 905051	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
EMG1   1020000 perm   637 sec   (1601 perm/sec)   p_kst 9.803922e-07   p_cons 8.873049e-01   p_joint 4.803922e-05

Joint ci ratio: 5.488959e-01	ci left: 3.603027e-05	ci right 6.399831e-05	k: 50	n:1030000
Cons ci ratio: 1.376092e-03	ci left: 8.867558e-01	ci right 8.879779e-01	k: 913989	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
EMG1   1030000 perm   648 sec   (1590 perm/sec)   p_kst 9.708738e-07   p_cons 8.873680e-01   p_joint 4.854369e-05

Joint ci ratio: 5.435923e-01	ci left: 3.651257e-05	ci right 6.447602e-05	k: 51	n:1040000
Cons ci ratio: 1.369649e-03	ci left: 8.867312e-01	ci right 8.879474e-01	k: 922834	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
EMG1   1040000 perm   658 sec   (1580 perm/sec)   p_kst 9.615385e-07   p_cons 8.873404e-01   p_joint 4.903846e-05

Joint ci ratio: 5.435925e-01	ci left: 3.616483e-05	ci right 6.386197e-05	k: 51	n:1050000
Cons ci ratio: 1.363634e-03	ci left: 8.866573e-01	ci right 8.878682e-01	k: 931627	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
EMG1   1050000 perm   669 sec   (1569 perm/sec)   p_kst 9.523810e-07   p_cons 8.872638e-01   p_joint 4.857143e-05

Joint ci ratio: 5.435926e-01	ci left: 3.582365e-05	ci right 6.325950e-05	k: 51	n:1060000
Cons ci ratio: 1.357382e-03	ci left: 8.866312e-01	ci right 8.878365e-01	k: 940469	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
EMG1   1060000 perm   680 sec   (1559 perm/sec)   p_kst 9.433962e-07   p_cons 8.872349e-01   p_joint 4.811321e-05

Joint ci ratio: 5.384398e-01	ci left: 3.629561e-05	ci right 6.372950e-05	k: 52	n:1070000
Cons ci ratio: 1.351064e-03	ci left: 8.866281e-01	ci right 8.878277e-01	k: 949335	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
EMG1   1070000 perm   691 sec   (1548 perm/sec)   p_kst 9.345794e-07   p_cons 8.872290e-01   p_joint 4.859813e-05

Joint ci ratio: 5.334308e-01	ci left: 3.676006e-05	ci right 6.418961e-05	k: 53	n:1080000
Cons ci ratio: 1.344865e-03	ci left: 8.866204e-01	ci right 8.878145e-01	k: 958196	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
EMG1   1080000 perm   702 sec   (1538 perm/sec)   p_kst 9.259259e-07   p_cons 8.872185e-01   p_joint 4.907407e-05

Joint ci ratio: 5.334310e-01	ci left: 3.642281e-05	ci right 6.360072e-05	k: 53	n:1090000
Cons ci ratio: 1.338922e-03	ci left: 8.865872e-01	ci right 8.877759e-01	k: 967029	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
EMG1   1090000 perm   713 sec   (1528 perm/sec)   p_kst 9.174312e-07   p_cons 8.871826e-01   p_joint 4.862385e-05

Joint ci ratio: 5.334311e-01	ci left: 3.609169e-05	ci right 6.302254e-05	k: 53	n:1100000
Cons ci ratio: 1.332833e-03	ci left: 8.865882e-01	ci right 8.877716e-01	k: 975899	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
EMG1   1100000 perm   725 sec   (1518 perm/sec)   p_kst 9.090909e-07   p_cons 8.871809e-01   p_joint 4.818182e-05

Joint ci ratio: 5.334312e-01	ci left: 3.576654e-05	ci right 6.245477e-05	k: 53	n:1110000
Cons ci ratio: 1.326791e-03	ci left: 8.865947e-01	ci right 8.877727e-01	k: 984775	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
EMG1   1110000 perm   736 sec   (1508 perm/sec)   p_kst 9.009009e-07   p_cons 8.871847e-01   p_joint 4.774775e-05

Joint ci ratio: 5.285595e-01	ci left: 3.622026e-05	ci right 6.290872e-05	k: 54	n:1120000
Cons ci ratio: 1.320783e-03	ci left: 8.866082e-01	ci right 8.877809e-01	k: 993659	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
EMG1   1120000 perm   748 sec   (1498 perm/sec)   p_kst 8.928571e-07   p_cons 8.871955e-01   p_joint 4.821429e-05

Joint ci ratio: 5.285596e-01	ci left: 3.589972e-05	ci right 6.235201e-05	k: 54	n:1130000
Cons ci ratio: 1.314937e-03	ci left: 8.866091e-01	ci right 8.877765e-01	k: 1002529	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
EMG1   1130000 perm   759 sec   (1488 perm/sec)   p_kst 8.849558e-07   p_cons 8.871938e-01   p_joint 4.778761e-05

Joint ci ratio: 5.238189e-01	ci left: 3.634540e-05	ci right 6.279784e-05	k: 55	n:1140000
Cons ci ratio: 1.309489e-03	ci left: 8.865607e-01	ci right 8.877233e-01	k: 1011343	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
EMG1   1140000 perm   771 sec   (1479 perm/sec)   p_kst 8.771930e-07   p_cons 8.871430e-01   p_joint 4.824561e-05

Joint ci ratio: 5.192036e-01	ci left: 3.678438e-05	ci right 6.323490e-05	k: 56	n:1150000
Cons ci ratio: 1.303707e-03	ci left: 8.865751e-01	ci right 8.877325e-01	k: 1020228	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
EMG1   1150000 perm   783 sec   (1469 perm/sec)   p_kst 8.695652e-07   p_cons 8.871548e-01   p_joint 4.869565e-05

Joint ci ratio: 5.147081e-01	ci left: 3.721679e-05	ci right 6.366343e-05	k: 57	n:1160000
Cons ci ratio: 1.298184e-03	ci left: 8.865607e-01	ci right 8.877132e-01	k: 1029080	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
EMG1   1160000 perm   794 sec   (1460 perm/sec)   p_kst 8.620690e-07   p_cons 8.871379e-01   p_joint 4.913793e-05

Joint ci ratio: 5.103274e-01	ci left: 3.764280e-05	ci right 6.408368e-05	k: 58	n:1170000
Cons ci ratio: 1.292853e-03	ci left: 8.865277e-01	ci right 8.876755e-01	k: 1037910	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
EMG1   1170000 perm   806 sec   (1452 perm/sec)   p_kst 8.547009e-07   p_cons 8.871026e-01   p_joint 4.957265e-05

Joint ci ratio: 5.103276e-01	ci left: 3.732379e-05	ci right 6.354060e-05	k: 58	n:1180000
Cons ci ratio: 1.287483e-03	ci left: 8.865115e-01	ci right 8.876544e-01	k: 1046759	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
EMG1   1180000 perm   818 sec   (1443 perm/sec)   p_kst 8.474576e-07   p_cons 8.870839e-01   p_joint 4.915254e-05

Joint ci ratio: 5.103277e-01	ci left: 3.701014e-05	ci right 6.300665e-05	k: 58	n:1190000
Cons ci ratio: 1.281932e-03	ci left: 8.865342e-01	ci right 8.876723e-01	k: 1055654	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
EMG1   1190000 perm   830 sec   (1434 perm/sec)   p_kst 8.403361e-07   p_cons 8.871042e-01   p_joint 4.873950e-05

Joint ci ratio: 5.060570e-01	ci left: 3.742815e-05	ci right 6.342097e-05	k: 59	n:1200000
Cons ci ratio: 1.276766e-03	ci left: 8.865074e-01	ci right 8.876408e-01	k: 1064490	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
EMG1   1200000 perm   842 sec   (1425 perm/sec)   p_kst 8.333333e-07   p_cons 8.870750e-01   p_joint 4.916667e-05

Joint ci ratio: 5.018917e-01	ci left: 3.784014e-05	ci right 6.382756e-05	k: 60	n:1210000
Cons ci ratio: 1.271373e-03	ci left: 8.865265e-01	ci right 8.876551e-01	k: 1073381	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
EMG1   1210000 perm   854 sec   (1417 perm/sec)   p_kst 8.264463e-07   p_cons 8.870917e-01   p_joint 4.958678e-05

Joint ci ratio: 5.018918e-01	ci left: 3.752997e-05	ci right 6.330438e-05	k: 60	n:1220000
Cons ci ratio: 1.266327e-03	ci left: 8.865010e-01	ci right 8.876251e-01	k: 1082218	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
EMG1   1220000 perm   866 sec   (1408 perm/sec)   p_kst 8.196721e-07   p_cons 8.870639e-01   p_joint 4.918033e-05

Joint ci ratio: 5.018919e-01	ci left: 3.722485e-05	ci right 6.278972e-05	k: 60	n:1230000
Cons ci ratio: 1.261085e-03	ci left: 8.865166e-01	ci right 8.876361e-01	k: 1091105	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
EMG1   1230000 perm   879 sec   (1400 perm/sec)   p_kst 8.130081e-07   p_cons 8.870772e-01   p_joint 4.878049e-05

Joint ci ratio: 4.938608e-01	ci left: 3.833492e-05	ci right 6.409729e-05	k: 62	n:1240000
Cons ci ratio: 1.255989e-03	ci left: 8.865190e-01	ci right 8.876340e-01	k: 1099976	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
EMG1   1240000 perm   891 sec   (1391 perm/sec)   p_kst 8.064516e-07   p_cons 8.870774e-01   p_joint 5.000000e-05

Joint ci ratio: 4.899873e-01	ci left: 3.872895e-05	ci right 6.448304e-05	k: 63	n:1250000
Cons ci ratio: 1.251063e-03	ci left: 8.865038e-01	ci right 8.876144e-01	k: 1108825	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
EMG1   1250000 perm   904 sec   (1383 perm/sec)   p_kst 8.000000e-07   p_cons 8.870600e-01   p_joint 5.040000e-05

Joint ci ratio: 4.862034e-01	ci left: 3.911751e-05	ci right 6.486190e-05	k: 64	n:1260000
Cons ci ratio: 1.245845e-03	ci left: 8.865453e-01	ci right 8.876513e-01	k: 1117745	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
EMG1   1260000 perm   917 sec   (1375 perm/sec)   p_kst 7.936508e-07   p_cons 8.870992e-01   p_joint 5.079365e-05

Joint ci ratio: 4.862035e-01	ci left: 3.880950e-05	ci right 6.435118e-05	k: 64	n:1270000
Cons ci ratio: 1.241047e-03	ci left: 8.865286e-01	ci right 8.876303e-01	k: 1126592	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
EMG1   1270000 perm   929 sec   (1367 perm/sec)   p_kst 7.874016e-07   p_cons 8.870803e-01   p_joint 5.039370e-05

Joint ci ratio: 4.862036e-01	ci left: 3.850630e-05	ci right 6.384844e-05	k: 64	n:1280000
Cons ci ratio: 1.236228e-03	ci left: 8.865247e-01	ci right 8.876220e-01	k: 1135455	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
EMG1   1280000 perm   942 sec   (1359 perm/sec)   p_kst 7.812500e-07   p_cons 8.870742e-01   p_joint 5.000000e-05

Joint ci ratio: 4.825061e-01	ci left: 3.888829e-05	ci right 6.422268e-05	k: 65	n:1290000
Cons ci ratio: 1.231468e-03	ci left: 8.865200e-01	ci right 8.876131e-01	k: 1144317	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
EMG1   1290000 perm   955 sec   (1350 perm/sec)   p_kst 7.751938e-07   p_cons 8.870674e-01   p_joint 5.038760e-05

Joint ci ratio: 4.753572e-01	ci left: 3.994182e-05	ci right 6.545157e-05	k: 67	n:1300000
Cons ci ratio: 1.226783e-03	ci left: 8.865123e-01	ci right 8.876013e-01	k: 1153175	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
EMG1   1300000 perm   968 sec   (1342 perm/sec)   p_kst 7.692308e-07   p_cons 8.870577e-01   p_joint 5.153846e-05

Joint ci ratio: 4.753573e-01	ci left: 3.963692e-05	ci right 6.495194e-05	k: 67	n:1310000
Cons ci ratio: 1.222131e-03	ci left: 8.865079e-01	ci right 8.875927e-01	k: 1162037	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
EMG1   1310000 perm   982 sec   (1334 perm/sec)   p_kst 7.633588e-07   p_cons 8.870511e-01   p_joint 5.114504e-05

Joint ci ratio: 4.685170e-01	ci left: 4.067152e-05	ci right 6.615402e-05	k: 69	n:1320000
Cons ci ratio: 1.217661e-03	ci left: 8.864822e-01	ci right 8.875631e-01	k: 1170871	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
EMG1   1320000 perm   995 sec   (1327 perm/sec)   p_kst 7.575758e-07   p_cons 8.870235e-01   p_joint 5.227273e-05

Joint ci ratio: 4.719001e-01	ci left: 3.970296e-05	ci right 6.481625e-05	k: 68	n:1330000
Cons ci ratio: 1.213167e-03	ci left: 8.864690e-01	ci right 8.875458e-01	k: 1179721	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
EMG1   1330000 perm   1008 sec   (1319 perm/sec)   p_kst 7.518797e-07   p_cons 8.870083e-01   p_joint 5.112782e-05

Joint ci ratio: 4.719002e-01	ci left: 3.940667e-05	ci right 6.433255e-05	k: 68	n:1340000
Cons ci ratio: 1.208645e-03	ci left: 8.864687e-01	ci right 8.875415e-01	k: 1188588	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
EMG1   1340000 perm   1021 sec   (1312 perm/sec)   p_kst 7.462687e-07   p_cons 8.870060e-01   p_joint 5.074627e-05

Joint ci ratio: 4.719003e-01	ci left: 3.911477e-05	ci right 6.385602e-05	k: 68	n:1350000
Cons ci ratio: 1.204161e-03	ci left: 8.864707e-01	ci right 8.875395e-01	k: 1197458	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
EMG1   1350000 perm   1035 sec   (1305 perm/sec)   p_kst 7.407407e-07   p_cons 8.870059e-01   p_joint 5.037037e-05

Joint ci ratio: 4.685174e-01	ci left: 3.947529e-05	ci right 6.420833e-05	k: 69	n:1360000
Cons ci ratio: 1.199598e-03	ci left: 8.864940e-01	ci right 8.875588e-01	k: 1206357	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
EMG1   1360000 perm   1049 sec   (1297 perm/sec)   p_kst 7.352941e-07   p_cons 8.870272e-01   p_joint 5.073529e-05

Joint ci ratio: 5.238211e-01	ci left: 3.024359e-05	ci right 5.225520e-05	k: 55	n:1370000
Cons ci ratio: 1.195226e-03	ci left: 8.864935e-01	ci right 8.875545e-01	k: 1215224	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
EMG1   1370000 perm   1062 sec   (1290 perm/sec)   p_kst 7.299270e-07   p_cons 8.870248e-01   p_joint 4.014599e-05

Joint ci ratio: 5.192058e-01	ci left: 3.065362e-05	ci right 5.269581e-05	k: 56	n:1380000
Cons ci ratio: 1.190717e-03	ci left: 8.865243e-01	ci right 8.875813e-01	k: 1224134	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
EMG1   1380000 perm   1075 sec   (1283 perm/sec)   p_kst 7.246377e-07   p_cons 8.870536e-01   p_joint 4.057971e-05

Joint ci ratio: 5.192059e-01	ci left: 3.043309e-05	ci right 5.231671e-05	k: 56	n:1390000
Cons ci ratio: 1.186488e-03	ci left: 8.865158e-01	ci right 8.875689e-01	k: 1232990	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
EMG1   1390000 perm   1089 sec   (1276 perm/sec)   p_kst 7.194245e-07   p_cons 8.870432e-01   p_joint 4.028777e-05

Joint ci ratio: 5.384430e-01	ci left: 2.774018e-05	ci right 4.870763e-05	k: 52	n:1400000
Cons ci ratio: 1.182181e-03	ci left: 8.865281e-01	ci right 8.875774e-01	k: 1241875	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
EMG1   1400000 perm   1103 sec   (1270 perm/sec)   p_kst 7.142857e-07   p_cons 8.870536e-01   p_joint 3.714286e-05

Joint ci ratio: 5.384431e-01	ci left: 2.754344e-05	ci right 4.836219e-05	k: 52	n:1410000
Cons ci ratio: 1.178026e-03	ci left: 8.865225e-01	ci right 8.875681e-01	k: 1250735	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
EMG1   1410000 perm   1117 sec   (1263 perm/sec)   p_kst 7.092199e-07   p_cons 8.870461e-01   p_joint 3.687943e-05

Joint ci ratio: 5.384432e-01	ci left: 2.734947e-05	ci right 4.802161e-05	k: 52	n:1420000
Cons ci ratio: 1.173967e-03	ci left: 8.865078e-01	ci right 8.875498e-01	k: 1259582	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
EMG1   1420000 perm   1131 sec   (1256 perm/sec)   p_kst 7.042254e-07   p_cons 8.870296e-01   p_joint 3.661972e-05

Joint ci ratio: 5.543618e-01	ci left: 2.535008e-05	ci right 4.530087e-05	k: 49	n:1430000
Cons ci ratio: 1.169901e-03	ci left: 8.865017e-01	ci right 8.875401e-01	k: 1268441	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
EMG1   1430000 perm   1145 sec   (1249 perm/sec)   p_kst 6.993007e-07   p_cons 8.870217e-01   p_joint 3.426573e-05

Joint ci ratio: 5.543619e-01	ci left: 2.517404e-05	ci right 4.498628e-05	k: 49	n:1440000
Cons ci ratio: 1.165772e-03	ci left: 8.865138e-01	ci right 8.875485e-01	k: 1277326	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
EMG1   1440000 perm   1159 sec   (1242 perm/sec)   p_kst 6.944444e-07   p_cons 8.870319e-01   p_joint 3.402778e-05

Joint ci ratio: 5.543620e-01	ci left: 2.500043e-05	ci right 4.467603e-05	k: 49	n:1450000
Cons ci ratio: 1.161571e-03	ci left: 8.865458e-01	ci right 8.875768e-01	k: 1286240	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
EMG1   1450000 perm   1173 sec   (1236 perm/sec)   p_kst 6.896552e-07   p_cons 8.870621e-01   p_joint 3.379310e-05

Joint ci ratio: 5.543620e-01	ci left: 2.482919e-05	ci right 4.437003e-05	k: 49	n:1460000
Cons ci ratio: 1.157402e-03	ci left: 8.865794e-01	ci right 8.876068e-01	k: 1295157	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
EMG1   1460000 perm   1188 sec   (1229 perm/sec)   p_kst 6.849315e-07   p_cons 8.870938e-01   p_joint 3.356164e-05

Joint ci ratio: 5.543621e-01	ci left: 2.466028e-05	ci right 4.406820e-05	k: 49	n:1470000
Cons ci ratio: 1.153514e-03	ci left: 8.865716e-01	ci right 8.875956e-01	k: 1304014	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
EMG1   1470000 perm   1203 sec   (1222 perm/sec)   p_kst 6.802721e-07   p_cons 8.870844e-01   p_joint 3.333333e-05

Joint ci ratio: 5.435965e-01	ci left: 2.565744e-05	ci right 4.530758e-05	k: 51	n:1480000
Cons ci ratio: 1.149819e-03	ci left: 8.865369e-01	ci right 8.875575e-01	k: 1312831	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
EMG1   1480000 perm   1217 sec   (1216 perm/sec)   p_kst 6.756757e-07   p_cons 8.870480e-01   p_joint 3.445946e-05

Joint ci ratio: 5.384437e-01	ci left: 2.606459e-05	ci right 4.576558e-05	k: 52	n:1490000
Cons ci ratio: 1.146063e-03	ci left: 8.865195e-01	ci right 8.875367e-01	k: 1321673	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
EMG1   1490000 perm   1232 sec   (1209 perm/sec)   p_kst 6.711409e-07   p_cons 8.870289e-01   p_joint 3.489933e-05

Joint ci ratio: 5.384437e-01	ci left: 2.589083e-05	ci right 4.546048e-05	k: 52	n:1500000
Cons ci ratio: 1.142412e-03	ci left: 8.864903e-01	ci right 8.875042e-01	k: 1330497	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
EMG1   1500000 perm   1247 sec   (1203 perm/sec)   p_kst 6.666667e-07   p_cons 8.869980e-01   p_joint 3.466667e-05

Joint ci ratio: 5.384438e-01	ci left: 2.571937e-05	ci right 4.515941e-05	k: 52	n:1510000
Cons ci ratio: 1.138781e-03	ci left: 8.864641e-01	ci right 8.874748e-01	k: 1339325	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
EMG1   1510000 perm   1262 sec   (1197 perm/sec)   p_kst 6.622517e-07   p_cons 8.869702e-01   p_joint 3.443709e-05

Joint ci ratio: 5.489004e-01	ci left: 2.441520e-05	ci right 4.336738e-05	k: 50	n:1520000
Cons ci ratio: 1.135061e-03	ci left: 8.864600e-01	ci right 8.874674e-01	k: 1348186	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
EMG1   1520000 perm   1276 sec   (1191 perm/sec)   p_kst 6.578947e-07   p_cons 8.869645e-01   p_joint 3.289474e-05

Joint ci ratio: 5.435968e-01	ci left: 2.481895e-05	ci right 4.382695e-05	k: 51	n:1530000
Cons ci ratio: 1.131341e-03	ci left: 8.864626e-01	ci right 8.874667e-01	k: 1357057	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
EMG1   1530000 perm   1292 sec   (1185 perm/sec)   p_kst 6.535948e-07   p_cons 8.869654e-01   p_joint 3.333333e-05

Joint ci ratio: 5.435968e-01	ci left: 2.465779e-05	ci right 4.354236e-05	k: 51	n:1540000
Cons ci ratio: 1.127741e-03	ci left: 8.864501e-01	ci right 8.874510e-01	k: 1365905	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
EMG1   1540000 perm   1307 sec   (1178 perm/sec)   p_kst 6.493506e-07   p_cons 8.869513e-01   p_joint 3.311688e-05

Joint ci ratio: 5.977859e-01	ci left: 1.952904e-05	ci right 3.662679e-05	k: 42	n:1550000
Cons ci ratio: 1.124099e-03	ci left: 8.864514e-01	ci right 8.874491e-01	k: 1374774	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
EMG1   1550000 perm   1322 sec   (1173 perm/sec)   p_kst 6.451613e-07   p_cons 8.869510e-01   p_joint 2.709677e-05

Joint ci ratio: 5.977860e-01	ci left: 1.940385e-05	ci right 3.639201e-05	k: 42	n:1560000
Cons ci ratio: 1.120635e-03	ci left: 8.864270e-01	ci right 8.874216e-01	k: 1383603	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
EMG1   1560000 perm   1337 sec   (1167 perm/sec)   p_kst 6.410256e-07   p_cons 8.869250e-01   p_joint 2.692308e-05

Joint ci ratio: 5.977860e-01	ci left: 1.928026e-05	ci right 3.616021e-05	k: 42	n:1570000
Cons ci ratio: 1.117026e-03	ci left: 8.864348e-01	ci right 8.874262e-01	k: 1392482	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
EMG1   1570000 perm   1352 sec   (1161 perm/sec)   p_kst 6.369427e-07   p_cons 8.869312e-01   p_joint 2.675159e-05

Joint ci ratio: 5.977861e-01	ci left: 1.915823e-05	ci right 3.593135e-05	k: 42	n:1580000
Cons ci ratio: 1.113388e-03	ci left: 8.864540e-01	ci right 8.874421e-01	k: 1401379	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
EMG1   1580000 perm   1368 sec   (1155 perm/sec)   p_kst 6.329114e-07   p_cons 8.869487e-01   p_joint 2.658228e-05

Joint ci ratio: 6.197984e-01	ci left: 1.744208e-05	ci right 3.353085e-05	k: 39	n:1590000
Cons ci ratio: 1.110029e-03	ci left: 8.864287e-01	ci right 8.874139e-01	k: 1410206	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
EMG1   1590000 perm   1383 sec   (1150 perm/sec)   p_kst 6.289308e-07   p_cons 8.869220e-01   p_joint 2.452830e-05

Joint ci ratio: 6.121931e-01	ci left: 1.786042e-05	ci right 3.404275e-05	k: 40	n:1600000
Cons ci ratio: 1.106490e-03	ci left: 8.864421e-01	ci right 8.874240e-01	k: 1419094	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
EMG1   1600000 perm   1399 sec   (1144 perm/sec)   p_kst 6.250000e-07   p_cons 8.869337e-01   p_joint 2.500000e-05

Joint ci ratio: 6.121932e-01	ci left: 1.774949e-05	ci right 3.383131e-05	k: 40	n:1610000
Cons ci ratio: 1.103067e-03	ci left: 8.864403e-01	ci right 8.874192e-01	k: 1427958	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
EMG1   1610000 perm   1414 sec   (1138 perm/sec)   p_kst 6.211180e-07   p_cons 8.869304e-01   p_joint 2.484472e-05

Joint ci ratio: 6.121932e-01	ci left: 1.763992e-05	ci right 3.362247e-05	k: 40	n:1620000
Cons ci ratio: 1.099827e-03	ci left: 8.864107e-01	ci right 8.873867e-01	k: 1436777	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
EMG1   1620000 perm   1430 sec   (1133 perm/sec)   p_kst 6.172840e-07   p_cons 8.868994e-01   p_joint 2.469136e-05

Joint ci ratio: 6.048612e-01	ci left: 1.805055e-05	ci right 3.412324e-05	k: 41	n:1630000
Cons ci ratio: 1.096458e-03	ci left: 8.864103e-01	ci right 8.873834e-01	k: 1445643	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
EMG1   1630000 perm   1446 sec   (1128 perm/sec)   p_kst 6.134969e-07   p_cons 8.868975e-01   p_joint 2.515337e-05

Joint ci ratio: 6.048612e-01	ci left: 1.794049e-05	ci right 3.391517e-05	k: 41	n:1640000
Cons ci ratio: 1.093054e-03	ci left: 8.864222e-01	ci right 8.873923e-01	k: 1454529	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
EMG1   1640000 perm   1461 sec   (1122 perm/sec)   p_kst 6.097561e-07   p_cons 8.869079e-01   p_joint 2.500000e-05

Joint ci ratio: 6.048613e-01	ci left: 1.783176e-05	ci right 3.370963e-05	k: 41	n:1650000
Cons ci ratio: 1.089707e-03	ci left: 8.864291e-01	ci right 8.873962e-01	k: 1463407	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
EMG1   1650000 perm   1477 sec   (1117 perm/sec)   p_kst 6.060606e-07   p_cons 8.869133e-01   p_joint 2.484848e-05

Joint ci ratio: 6.048613e-01	ci left: 1.772434e-05	ci right 3.350656e-05	k: 41	n:1660000
Cons ci ratio: 1.086450e-03	ci left: 8.864251e-01	ci right 8.873892e-01	k: 1472267	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
EMG1   1660000 perm   1493 sec   (1112 perm/sec)   p_kst 6.024096e-07   p_cons 8.869078e-01   p_joint 2.469880e-05

Joint ci ratio: 6.048613e-01	ci left: 1.761820e-05	ci right 3.330592e-05	k: 41	n:1670000
Cons ci ratio: 1.083370e-03	ci left: 8.863935e-01	ci right 8.873549e-01	k: 1481081	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
EMG1   1670000 perm   1509 sec   (1107 perm/sec)   p_kst 5.988024e-07   p_cons 8.868749e-01   p_joint 2.455090e-05

Joint ci ratio: 6.048614e-01	ci left: 1.751333e-05	ci right 3.310767e-05	k: 41	n:1680000
Cons ci ratio: 1.080233e-03	ci left: 8.863778e-01	ci right 8.873364e-01	k: 1489921	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
EMG1   1680000 perm   1525 sec   (1101 perm/sec)   p_kst 5.952381e-07   p_cons 8.868577e-01   p_joint 2.440476e-05

Joint ci ratio: 6.048614e-01	ci left: 1.740970e-05	ci right 3.291177e-05	k: 41	n:1690000
Cons ci ratio: 1.076929e-03	ci left: 8.863984e-01	ci right 8.873541e-01	k: 1498822	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
EMG1   1690000 perm   1542 sec   (1096 perm/sec)   p_kst 5.917160e-07   p_cons 8.868769e-01   p_joint 2.426036e-05

Joint ci ratio: 5.977867e-01	ci left: 1.780588e-05	ci right 3.339503e-05	k: 42	n:1700000
Cons ci ratio: 1.073952e-03	ci left: 8.863634e-01	ci right 8.873164e-01	k: 1507629	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
EMG1   1700000 perm   1558 sec   (1091 perm/sec)   p_kst 5.882353e-07   p_cons 8.868406e-01   p_joint 2.470588e-05

Joint ci ratio: 5.977867e-01	ci left: 1.770175e-05	ci right 3.319974e-05	k: 42	n:1710000
Cons ci ratio: 1.070727e-03	ci left: 8.863798e-01	ci right 8.873300e-01	k: 1516523	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
EMG1   1710000 perm   1575 sec   (1086 perm/sec)   p_kst 5.847953e-07   p_cons 8.868556e-01   p_joint 2.456140e-05

Joint ci ratio: 5.977867e-01	ci left: 1.759884e-05	ci right 3.300672e-05	k: 42	n:1720000
Cons ci ratio: 1.067636e-03	ci left: 8.863762e-01	ci right 8.873236e-01	k: 1525383	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
EMG1   1720000 perm   1591 sec   (1081 perm/sec)   p_kst 5.813953e-07   p_cons 8.868506e-01   p_joint 2.441860e-05

Joint ci ratio: 5.977868e-01	ci left: 1.749711e-05	ci right 3.281593e-05	k: 42	n:1730000
Cons ci ratio: 1.064680e-03	ci left: 8.863524e-01	ci right 8.872972e-01	k: 1534208	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
EMG1   1730000 perm   1608 sec   (1076 perm/sec)   p_kst 5.780347e-07   p_cons 8.868254e-01   p_joint 2.427746e-05

Joint ci ratio: 5.977868e-01	ci left: 1.739655e-05	ci right 3.262733e-05	k: 42	n:1740000
Cons ci ratio: 1.061598e-03	ci left: 8.863571e-01	ci right 8.872991e-01	k: 1543082	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
EMG1   1740000 perm   1625 sec   (1071 perm/sec)   p_kst 5.747126e-07   p_cons 8.868287e-01   p_joint 2.413793e-05

Joint ci ratio: 5.977869e-01	ci left: 1.729714e-05	ci right 3.244089e-05	k: 42	n:1750000
Cons ci ratio: 1.058571e-03	ci left: 8.863566e-01	ci right 8.872959e-01	k: 1551947	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
EMG1   1750000 perm   1642 sec   (1066 perm/sec)   p_kst 5.714286e-07   p_cons 8.868269e-01   p_joint 2.400000e-05

Joint ci ratio: 5.909547e-01	ci left: 1.768148e-05	ci right 3.290936e-05	k: 43	n:1760000
Cons ci ratio: 1.055629e-03	ci left: 8.863447e-01	ci right 8.872813e-01	k: 1560792	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
EMG1   1760000 perm   1658 sec   (1061 perm/sec)   p_kst 5.681818e-07   p_cons 8.868136e-01   p_joint 2.443182e-05

Joint ci ratio: 5.843515e-01	ci left: 1.806247e-05	ci right 3.337158e-05	k: 44	n:1770000
Cons ci ratio: 1.052607e-03	ci left: 8.863527e-01	ci right 8.872867e-01	k: 1569672	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
EMG1   1770000 perm   1675 sec   (1057 perm/sec)   p_kst 5.649718e-07   p_cons 8.868203e-01   p_joint 2.485876e-05

Joint ci ratio: 5.843515e-01	ci left: 1.796099e-05	ci right 3.318410e-05	k: 44	n:1780000
Cons ci ratio: 1.049726e-03	ci left: 8.863387e-01	ci right 8.872701e-01	k: 1578513	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
EMG1   1780000 perm   1692 sec   (1052 perm/sec)   p_kst 5.617978e-07   p_cons 8.868051e-01   p_joint 2.471910e-05

Joint ci ratio: 5.843516e-01	ci left: 1.786065e-05	ci right 3.299871e-05	k: 44	n:1790000
Cons ci ratio: 1.046770e-03	ci left: 8.863439e-01	ci right 8.872727e-01	k: 1587388	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
EMG1   1790000 perm   1709 sec   (1047 perm/sec)   p_kst 5.586592e-07   p_cons 8.868089e-01   p_joint 2.458101e-05

Joint ci ratio: 5.843516e-01	ci left: 1.776143e-05	ci right 3.281539e-05	k: 44	n:1800000
Cons ci ratio: 1.043861e-03	ci left: 8.863446e-01	ci right 8.872708e-01	k: 1596255	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
EMG1   1800000 perm   1726 sec   (1043 perm/sec)   p_kst 5.555556e-07   p_cons 8.868083e-01   p_joint 2.444444e-05

Joint ci ratio: 5.843517e-01	ci left: 1.766330e-05	ci right 3.263409e-05	k: 44	n:1810000
Cons ci ratio: 1.041200e-03	ci left: 8.863021e-01	ci right 8.872259e-01	k: 1605044	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
EMG1   1810000 perm   1744 sec   (1038 perm/sec)   p_kst 5.524862e-07   p_cons 8.867646e-01   p_joint 2.430939e-05

Joint ci ratio: 5.779650e-01	ci left: 1.803484e-05	ci right 3.308422e-05	k: 45	n:1820000
Cons ci ratio: 1.038289e-03	ci left: 8.863124e-01	ci right 8.872336e-01	k: 1613928	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
EMG1   1820000 perm   1761 sec   (1034 perm/sec)   p_kst 5.494505e-07   p_cons 8.867736e-01   p_joint 2.472527e-05

Joint ci ratio: 5.779650e-01	ci left: 1.793629e-05	ci right 3.290344e-05	k: 45	n:1830000
Cons ci ratio: 1.035560e-03	ci left: 8.862919e-01	ci right 8.872107e-01	k: 1622756	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
EMG1   1830000 perm   1778 sec   (1029 perm/sec)   p_kst 5.464481e-07   p_cons 8.867519e-01   p_joint 2.459016e-05

Joint ci ratio: 5.779651e-01	ci left: 1.783881e-05	ci right 3.272461e-05	k: 45	n:1840000
Cons ci ratio: 1.032750e-03	ci left: 8.862918e-01	ci right 8.872081e-01	k: 1631621	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
EMG1   1840000 perm   1796 sec   (1025 perm/sec)   p_kst 5.434783e-07   p_cons 8.867505e-01   p_joint 2.445652e-05

Joint ci ratio: 5.717833e-01	ci left: 1.820426e-05	ci right 3.316611e-05	k: 46	n:1850000
Cons ci ratio: 1.030014e-03	ci left: 8.862814e-01	ci right 8.871953e-01	k: 1640467	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
EMG1   1850000 perm   1813 sec   (1020 perm/sec)   p_kst 5.405405e-07   p_cons 8.867389e-01   p_joint 2.486486e-05

Joint ci ratio: 5.717834e-01	ci left: 1.810639e-05	ci right 3.298780e-05	k: 46	n:1860000
Cons ci ratio: 1.027383e-03	ci left: 8.862549e-01	ci right 8.871664e-01	k: 1649283	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
EMG1   1860000 perm   1831 sec   (1016 perm/sec)   p_kst 5.376344e-07   p_cons 8.867113e-01   p_joint 2.473118e-05

Joint ci ratio: 5.717834e-01	ci left: 1.800956e-05	ci right 3.281139e-05	k: 46	n:1870000
Cons ci ratio: 1.024630e-03	ci left: 8.862566e-01	ci right 8.871657e-01	k: 1658151	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
EMG1   1870000 perm   1849 sec   (1012 perm/sec)   p_kst 5.347594e-07   p_cons 8.867118e-01   p_joint 2.459893e-05

Joint ci ratio: 5.717835e-01	ci left: 1.791377e-05	ci right 3.263686e-05	k: 46	n:1880000
Cons ci ratio: 1.021942e-03	ci left: 8.862498e-01	ci right 8.871565e-01	k: 1667003	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
EMG1   1880000 perm   1866 sec   (1007 perm/sec)   p_kst 5.319149e-07   p_cons 8.867037e-01   p_joint 2.446809e-05

Joint ci ratio: 5.657959e-01	ci left: 1.827192e-05	ci right 3.306867e-05	k: 47	n:1890000
Cons ci ratio: 1.019192e-03	ci left: 8.862595e-01	ci right 8.871637e-01	k: 1675886	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
EMG1   1890000 perm   1884 sec   (1003 perm/sec)   p_kst 5.291005e-07   p_cons 8.867122e-01   p_joint 2.486772e-05

Joint ci ratio: 5.599926e-01	ci left: 1.862712e-05	ci right 3.349514e-05	k: 48	n:1900000
Cons ci ratio: 1.016416e-03	ci left: 8.862785e-01	ci right 8.871803e-01	k: 1684787	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
EMG1   1900000 perm   1902 sec   (999 perm/sec)   p_kst 5.263158e-07   p_cons 8.867300e-01   p_joint 2.526316e-05

Joint ci ratio: 5.599927e-01	ci left: 1.852959e-05	ci right 3.331978e-05	k: 48	n:1910000
Cons ci ratio: 1.013700e-03	ci left: 8.862900e-01	ci right 8.871894e-01	k: 1693674	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
EMG1   1910000 perm   1920 sec   (995 perm/sec)   p_kst 5.235602e-07   p_cons 8.867403e-01   p_joint 2.513089e-05

Joint ci ratio: 5.599927e-01	ci left: 1.843308e-05	ci right 3.314624e-05	k: 48	n:1920000
Cons ci ratio: 1.010997e-03	ci left: 8.863030e-01	ci right 8.872000e-01	k: 1702564	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
EMG1   1920000 perm   1939 sec   (990 perm/sec)   p_kst 5.208333e-07   p_cons 8.867521e-01   p_joint 2.500000e-05

Joint ci ratio: 5.599927e-01	ci left: 1.833757e-05	ci right 3.297450e-05	k: 48	n:1930000
Cons ci ratio: 1.008425e-03	ci left: 8.862940e-01	ci right 8.871887e-01	k: 1711412	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
EMG1   1930000 perm   1957 sec   (986 perm/sec)   p_kst 5.181347e-07   p_cons 8.867420e-01   p_joint 2.487047e-05

Joint ci ratio: 5.977876e-01	ci left: 1.560309e-05	ci right 2.926370e-05	k: 42	n:1940000
Cons ci ratio: 1.006013e-03	ci left: 8.862573e-01	ci right 8.871498e-01	k: 1720206	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
EMG1   1940000 perm   1975 sec   (982 perm/sec)   p_kst 5.154639e-07   p_cons 8.867041e-01   p_joint 2.164948e-05

Joint ci ratio: 5.977877e-01	ci left: 1.552307e-05	ci right 2.911363e-05	k: 42	n:1950000
Cons ci ratio: 1.003330e-03	ci left: 8.862784e-01	ci right 8.871686e-01	k: 1729112	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
EMG1   1950000 perm   1994 sec   (978 perm/sec)   p_kst 5.128205e-07   p_cons 8.867241e-01   p_joint 2.153846e-05

Joint ci ratio: 5.977877e-01	ci left: 1.544387e-05	ci right 2.896509e-05	k: 42	n:1960000
Cons ci ratio: 1.000753e-03	ci left: 8.862825e-01	ci right 8.871704e-01	k: 1737985	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
EMG1   1960000 perm   2012 sec   (974 perm/sec)   p_kst 5.102041e-07   p_cons 8.867270e-01   p_joint 2.142857e-05

Joint ci ratio: 5.909555e-01	ci left: 1.579665e-05	ci right 2.940127e-05	k: 43	n:1970000
Cons ci ratio: 9.981469e-04	ci left: 8.862962e-01	ci right 8.871818e-01	k: 1746877	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
EMG1   1970000 perm   2030 sec   (970 perm/sec)   p_kst 5.076142e-07   p_cons 8.867396e-01   p_joint 2.182741e-05

Joint ci ratio: 5.909555e-01	ci left: 1.571687e-05	ci right 2.925278e-05	k: 43	n:1980000
Cons ci ratio: 9.955466e-04	ci left: 8.863128e-01	ci right 8.871961e-01	k: 1755775	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
EMG1   1980000 perm   2049 sec   (966 perm/sec)   p_kst 5.050505e-07   p_cons 8.867551e-01   p_joint 2.171717e-05

Joint ci ratio: 5.909556e-01	ci left: 1.563789e-05	ci right 2.910578e-05	k: 43	n:1990000
Cons ci ratio: 9.929142e-04	ci left: 8.863399e-01	ci right 8.872208e-01	k: 1764694	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
EMG1   1990000 perm   2067 sec   (963 perm/sec)   p_kst 5.025126e-07   p_cons 8.867809e-01   p_joint 2.160804e-05

Joint ci ratio: 5.909556e-01	ci left: 1.555970e-05	ci right 2.896025e-05	k: 43	n:2000000
Cons ci ratio: 9.904184e-04	ci left: 8.863431e-01	ci right 8.872218e-01	k: 1773566	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
EMG1   2000000 perm   2086 sec   (959 perm/sec)   p_kst 5.000000e-07   p_cons 8.867830e-01   p_joint 2.150000e-05

Joint ci ratio: 5.909556e-01	ci left: 1.548229e-05	ci right 2.881617e-05	k: 43	n:2010000
Cons ci ratio: 9.878704e-04	ci left: 8.863607e-01	ci right 8.872372e-01	k: 1782467	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
EMG1   2010000 perm   2105 sec   (955 perm/sec)   p_kst 4.975124e-07   p_cons 8.867995e-01   p_joint 2.139303e-05

Joint ci ratio: 5.909557e-01	ci left: 1.540564e-05	ci right 2.867352e-05	k: 43	n:2020000
Cons ci ratio: 9.855096e-04	ci left: 8.863439e-01	ci right 8.872183e-01	k: 1791299	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
EMG1   2020000 perm   2124 sec   (951 perm/sec)   p_kst 4.950495e-07   p_cons 8.867817e-01   p_joint 2.128713e-05

Joint ci ratio: 5.909557e-01	ci left: 1.532975e-05	ci right 2.853227e-05	k: 43	n:2030000
Cons ci ratio: 9.831801e-04	ci left: 8.863244e-01	ci right 8.871967e-01	k: 1800125	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
EMG1   2030000 perm   2143 sec   (947 perm/sec)   p_kst 4.926108e-07   p_cons 8.867611e-01   p_joint 2.118227e-05

Joint ci ratio: 5.843525e-01	ci left: 1.567184e-05	ci right 2.895477e-05	k: 44	n:2040000
Cons ci ratio: 9.807737e-04	ci left: 8.863242e-01	ci right 8.871943e-01	k: 1808990	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
EMG1   2040000 perm   2163 sec   (943 perm/sec)   p_kst 4.901961e-07   p_cons 8.867598e-01   p_joint 2.156863e-05

Joint ci ratio: 6.722687e-01	ci left: 1.108085e-05	ci right 2.260689e-05	k: 33	n:2050000
Cons ci ratio: 9.783658e-04	ci left: 8.863279e-01	ci right 8.871959e-01	k: 1817863	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
EMG1   2050000 perm   2182 sec   (940 perm/sec)   p_kst 4.878049e-07   p_cons 8.867624e-01   p_joint 1.609756e-05

Joint ci ratio: 6.722687e-01	ci left: 1.102705e-05	ci right 2.249715e-05	k: 33	n:2060000
Cons ci ratio: 9.761218e-04	ci left: 8.863014e-01	ci right 8.871674e-01	k: 1826674	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
EMG1   2060000 perm   2201 sec   (936 perm/sec)   p_kst 4.854369e-07   p_cons 8.867350e-01   p_joint 1.601942e-05

Joint ci ratio: 6.625952e-01	ci left: 1.137490e-05	ci right 2.295239e-05	k: 34	n:2070000
Cons ci ratio: 9.737526e-04	ci left: 8.863042e-01	ci right 8.871681e-01	k: 1835545	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
EMG1   2070000 perm   2221 sec   (932 perm/sec)   p_kst 4.830918e-07   p_cons 8.867367e-01   p_joint 1.642512e-05

Joint ci ratio: 6.625952e-01	ci left: 1.132021e-05	ci right 2.284204e-05	k: 34	n:2080000
Cons ci ratio: 9.713634e-04	ci left: 8.863147e-01	ci right 8.871765e-01	k: 1844432	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
EMG1   2080000 perm   2240 sec   (929 perm/sec)   p_kst 4.807692e-07   p_cons 8.867462e-01   p_joint 1.634615e-05

Joint ci ratio: 6.533276e-01	ci left: 1.166452e-05	ci right 2.329013e-05	k: 35	n:2090000
Cons ci ratio: 9.691694e-04	ci left: 8.862882e-01	ci right 8.871480e-01	k: 1853242	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
EMG1   2090000 perm   2260 sec   (925 perm/sec)   p_kst 4.784689e-07   p_cons 8.867187e-01   p_joint 1.674641e-05

Joint ci ratio: 6.533276e-01	ci left: 1.160897e-05	ci right 2.317922e-05	k: 35	n:2100000
Cons ci ratio: 9.668159e-04	ci left: 8.862982e-01	ci right 8.871560e-01	k: 1862128	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
EMG1   2100000 perm   2279 sec   (922 perm/sec)   p_kst 4.761905e-07   p_cons 8.867276e-01   p_joint 1.666667e-05

Joint ci ratio: 6.533276e-01	ci left: 1.155395e-05	ci right 2.306937e-05	k: 35	n:2110000
Cons ci ratio: 9.645365e-04	ci left: 8.862962e-01	ci right 8.871520e-01	k: 1870989	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
EMG1   2110000 perm   2299 sec   (918 perm/sec)   p_kst 4.739336e-07   p_cons 8.867246e-01   p_joint 1.658768e-05

Joint ci ratio: 6.533276e-01	ci left: 1.149945e-05	ci right 2.296055e-05	k: 35	n:2120000
Cons ci ratio: 9.621894e-04	ci left: 8.863118e-01	ci right 8.871655e-01	k: 1879887	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
EMG1   2120000 perm   2318 sec   (914 perm/sec)   p_kst 4.716981e-07   p_cons 8.867392e-01   p_joint 1.650943e-05

Joint ci ratio: 6.533277e-01	ci left: 1.144546e-05	ci right 2.285276e-05	k: 35	n:2130000
Cons ci ratio: 9.601556e-04	ci left: 8.862651e-01	ci right 8.871169e-01	k: 1888653	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
EMG1   2130000 perm   2338 sec   (911 perm/sec)   p_kst 4.694836e-07   p_cons 8.866915e-01   p_joint 1.643192e-05

Joint ci ratio: 6.533277e-01	ci left: 1.139198e-05	ci right 2.274597e-05	k: 35	n:2140000
Cons ci ratio: 9.578515e-04	ci left: 8.862783e-01	ci right 8.871281e-01	k: 1897546	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
EMG1   2140000 perm   2359 sec   (907 perm/sec)   p_kst 4.672897e-07   p_cons 8.867037e-01   p_joint 1.635514e-05

Joint ci ratio: 6.533277e-01	ci left: 1.133899e-05	ci right 2.264017e-05	k: 35	n:2150000
Cons ci ratio: 9.557099e-04	ci left: 8.862607e-01	ci right 8.871085e-01	k: 1906373	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
EMG1   2150000 perm   2378 sec   (904 perm/sec)   p_kst 4.651163e-07   p_cons 8.866851e-01   p_joint 1.627907e-05

Joint ci ratio: 6.533277e-01	ci left: 1.128650e-05	ci right 2.253536e-05	k: 35	n:2160000
Cons ci ratio: 9.534837e-04	ci left: 8.862640e-01	ci right 8.871099e-01	k: 1915245	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
EMG1   2160000 perm   2399 sec   (900 perm/sec)   p_kst 4.629630e-07   p_cons 8.866875e-01   p_joint 1.620370e-05

Joint ci ratio: 6.533278e-01	ci left: 1.123449e-05	ci right 2.243151e-05	k: 35	n:2170000
Cons ci ratio: 9.512774e-04	ci left: 8.862665e-01	ci right 8.871104e-01	k: 1924115	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
EMG1   2170000 perm   2419 sec   (897 perm/sec)   p_kst 4.608295e-07   p_cons 8.866889e-01   p_joint 1.612903e-05

Joint ci ratio: 6.533278e-01	ci left: 1.118295e-05	ci right 2.232861e-05	k: 35	n:2180000
Cons ci ratio: 9.490148e-04	ci left: 8.862840e-01	ci right 8.871260e-01	k: 1933018	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
EMG1   2180000 perm   2439 sec   (894 perm/sec)   p_kst 4.587156e-07   p_cons 8.867055e-01   p_joint 1.605505e-05

Joint ci ratio: 6.533278e-01	ci left: 1.113189e-05	ci right 2.222666e-05	k: 35	n:2190000
Cons ci ratio: 9.468178e-04	ci left: 8.862909e-01	ci right 8.871309e-01	k: 1941898	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
EMG1   2190000 perm   2460 sec   (890 perm/sec)   p_kst 4.566210e-07   p_cons 8.867114e-01   p_joint 1.598174e-05

Joint ci ratio: 6.533278e-01	ci left: 1.108129e-05	ci right 2.212563e-05	k: 35	n:2200000
Cons ci ratio: 9.446381e-04	ci left: 8.862973e-01	ci right 8.871353e-01	k: 1950777	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
EMG1   2200000 perm   2480 sec   (887 perm/sec)   p_kst 4.545455e-07   p_cons 8.867168e-01   p_joint 1.590909e-05

Joint ci ratio: 6.533279e-01	ci left: 1.103115e-05	ci right 2.202551e-05	k: 35	n:2210000
Cons ci ratio: 9.425434e-04	ci left: 8.862886e-01	ci right 8.871248e-01	k: 1959623	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
EMG1   2210000 perm   2501 sec   (884 perm/sec)   p_kst 4.524887e-07   p_cons 8.867072e-01   p_joint 1.583710e-05

Joint ci ratio: 6.533279e-01	ci left: 1.098146e-05	ci right 2.192630e-05	k: 35	n:2220000
Cons ci ratio: 9.404141e-04	ci left: 8.862905e-01	ci right 8.871248e-01	k: 1968492	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
EMG1   2220000 perm   2522 sec   (880 perm/sec)   p_kst 4.504505e-07   p_cons 8.867081e-01   p_joint 1.576577e-05

Joint ci ratio: 6.533279e-01	ci left: 1.093221e-05	ci right 2.182797e-05	k: 35	n:2230000
Cons ci ratio: 9.382468e-04	ci left: 8.863035e-01	ci right 8.871359e-01	k: 1977386	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
EMG1   2230000 perm   2543 sec   (877 perm/sec)   p_kst 4.484305e-07   p_cons 8.867202e-01   p_joint 1.569507e-05

Joint ci ratio: 6.444386e-01	ci left: 1.125626e-05	ci right 2.224956e-05	k: 36	n:2240000
Cons ci ratio: 9.362317e-04	ci left: 8.862869e-01	ci right 8.871175e-01	k: 1986214	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
EMG1   2240000 perm   2564 sec   (874 perm/sec)   p_kst 4.464286e-07   p_cons 8.867027e-01   p_joint 1.607143e-05

Joint ci ratio: 5.909563e-01	ci left: 1.383084e-05	ci right 2.574246e-05	k: 43	n:2250000
Cons ci ratio: 9.132880e-04	ci left: 8.907541e-01	ci right 8.915684e-01	k: 2005114	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
EMG1   2250000 perm   2584 sec   (871 perm/sec)   p_kst 4.444444e-07   p_cons 8.911618e-01   p_joint 1.911111e-05

Joint ci ratio: 5.909564e-01	ci left: 1.376964e-05	ci right 2.562855e-05	k: 43	n:2260000
Cons ci ratio: 9.113267e-04	ci left: 8.907419e-01	ci right 8.915544e-01	k: 2013996	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
EMG1   2260000 perm   2605 sec   (868 perm/sec)   p_kst 4.424779e-07   p_cons 8.911487e-01   p_joint 1.902655e-05

Joint ci ratio: 5.909564e-01	ci left: 1.370898e-05	ci right 2.551565e-05	k: 43	n:2270000
Cons ci ratio: 9.094235e-04	ci left: 8.907201e-01	ci right 8.915309e-01	k: 2022856	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
EMG1   2270000 perm   2626 sec   (864 perm/sec)   p_kst 4.405286e-07   p_cons 8.911260e-01   p_joint 1.894273e-05

Joint ci ratio: 5.909564e-01	ci left: 1.364885e-05	ci right 2.540374e-05	k: 43	n:2280000
Cons ci ratio: 9.074542e-04	ci left: 8.907151e-01	ci right 8.915242e-01	k: 2031754	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
EMG1   2280000 perm   2647 sec   (861 perm/sec)   p_kst 4.385965e-07   p_cons 8.911202e-01   p_joint 1.885965e-05

Joint ci ratio: 5.909564e-01	ci left: 1.358925e-05	ci right 2.529281e-05	k: 43	n:2290000
Cons ci ratio: 9.056809e-04	ci left: 8.906709e-01	ci right 8.914783e-01	k: 2040562	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
EMG1   2290000 perm   2669 sec   (858 perm/sec)   p_kst 4.366812e-07   p_cons 8.910751e-01   p_joint 1.877729e-05

Joint ci ratio: 5.909565e-01	ci left: 1.353017e-05	ci right 2.518284e-05	k: 43	n:2300000
Cons ci ratio: 9.036628e-04	ci left: 8.906819e-01	ci right 8.914876e-01	k: 2049496	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
EMG1   2300000 perm   2690 sec   (855 perm/sec)   p_kst 4.347826e-07   p_cons 8.910852e-01   p_joint 1.869565e-05

Joint ci ratio: 5.909565e-01	ci left: 1.347160e-05	ci right 2.507382e-05	k: 43	n:2310000
Cons ci ratio: 9.017004e-04	ci left: 8.906837e-01	ci right 8.914876e-01	k: 2058409	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
EMG1   2310000 perm   2711 sec   (852 perm/sec)   p_kst 4.329004e-07   p_cons 8.910861e-01   p_joint 1.861472e-05

Joint ci ratio: 5.909565e-01	ci left: 1.341353e-05	ci right 2.496575e-05	k: 43	n:2320000
Cons ci ratio: 8.998786e-04	ci left: 8.906579e-01	ci right 8.914601e-01	k: 2067258	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
EMG1   2320000 perm   2733 sec   (849 perm/sec)   p_kst 4.310345e-07   p_cons 8.910595e-01   p_joint 1.853448e-05

Joint ci ratio: 5.909565e-01	ci left: 1.335596e-05	ci right 2.485860e-05	k: 43	n:2330000
Cons ci ratio: 8.979843e-04	ci left: 8.906503e-01	ci right 8.914509e-01	k: 2076149	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
EMG1   2330000 perm   2754 sec   (846 perm/sec)   p_kst 4.291845e-07   p_cons 8.910511e-01   p_joint 1.845494e-05

Joint ci ratio: 5.843534e-01	ci left: 1.366263e-05	ci right 2.524263e-05	k: 44	n:2340000
Cons ci ratio: 8.960763e-04	ci left: 8.906484e-01	ci right 8.914472e-01	k: 2085053	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
EMG1   2340000 perm   2776 sec   (843 perm/sec)   p_kst 4.273504e-07   p_cons 8.910483e-01   p_joint 1.880342e-05

Joint ci ratio: 5.843534e-01	ci left: 1.360449e-05	ci right 2.513522e-05	k: 44	n:2350000
Cons ci ratio: 8.942138e-04	ci left: 8.906392e-01	ci right 8.914364e-01	k: 2093940	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
EMG1   2350000 perm   2798 sec   (840 perm/sec)   p_kst 4.255319e-07   p_cons 8.910383e-01   p_joint 1.872340e-05

Joint ci ratio: 5.843534e-01	ci left: 1.354684e-05	ci right 2.502871e-05	k: 44	n:2360000
Cons ci ratio: 8.922693e-04	ci left: 8.906505e-01	ci right 8.914460e-01	k: 2102875	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
EMG1   2360000 perm   2819 sec   (837 perm/sec)   p_kst 4.237288e-07   p_cons 8.910487e-01   p_joint 1.864407e-05

Joint ci ratio: 5.843534e-01	ci left: 1.348968e-05	ci right 2.492310e-05	k: 44	n:2370000
Cons ci ratio: 8.902852e-04	ci left: 8.906731e-01	ci right 8.914668e-01	k: 2111837	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
EMG1   2370000 perm   2841 sec   (834 perm/sec)   p_kst 4.219409e-07   p_cons 8.910705e-01   p_joint 1.856540e-05

Joint ci ratio: 5.843535e-01	ci left: 1.343300e-05	ci right 2.481839e-05	k: 44	n:2380000
Cons ci ratio: 8.883316e-04	ci left: 8.906918e-01	ci right 8.914838e-01	k: 2120790	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
EMG1   2380000 perm   2863 sec   (831 perm/sec)   p_kst 4.201681e-07   p_cons 8.910882e-01   p_joint 1.848739e-05

Joint ci ratio: 5.843535e-01	ci left: 1.337680e-05	ci right 2.471454e-05	k: 44	n:2390000
Cons ci ratio: 8.865359e-04	ci left: 8.906784e-01	ci right 8.914688e-01	k: 2129667	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
EMG1   2390000 perm   2885 sec   (828 perm/sec)   p_kst 4.184100e-07   p_cons 8.910741e-01   p_joint 1.841004e-05

Joint ci ratio: 5.843535e-01	ci left: 1.332106e-05	ci right 2.461157e-05	k: 44	n:2400000
Cons ci ratio: 8.847093e-04	ci left: 8.906743e-01	ci right 8.914631e-01	k: 2138566	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
EMG1   2400000 perm   2907 sec   (826 perm/sec)   p_kst 4.166667e-07   p_cons 8.910692e-01   p_joint 1.833333e-05

Joint ci ratio: 5.843535e-01	ci left: 1.326578e-05	ci right 2.450944e-05	k: 44	n:2410000
Cons ci ratio: 8.828562e-04	ci left: 8.906786e-01	ci right 8.914657e-01	k: 2147485	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
EMG1   2410000 perm   2929 sec   (823 perm/sec)   p_kst 4.149378e-07   p_cons 8.910726e-01   p_joint 1.825726e-05

Joint ci ratio: 5.843535e-01	ci left: 1.321097e-05	ci right 2.440817e-05	k: 44	n:2420000
Cons ci ratio: 8.810316e-04	ci left: 8.906791e-01	ci right 8.914646e-01	k: 2156395	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
EMG1   2420000 perm   2951 sec   (820 perm/sec)   p_kst 4.132231e-07   p_cons 8.910723e-01   p_joint 1.818182e-05

Joint ci ratio: 5.843536e-01	ci left: 1.315660e-05	ci right 2.430772e-05	k: 44	n:2430000
Cons ci ratio: 8.792854e-04	ci left: 8.906648e-01	ci right 8.914487e-01	k: 2165269	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
EMG1   2430000 perm   2973 sec   (817 perm/sec)   p_kst 4.115226e-07   p_cons 8.910572e-01   p_joint 1.810700e-05

Joint ci ratio: 5.843536e-01	ci left: 1.310268e-05	ci right 2.420810e-05	k: 44	n:2440000
Cons ci ratio: 8.774680e-04	ci left: 8.906686e-01	ci right 8.914509e-01	k: 2174187	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
EMG1   2440000 perm   2996 sec   (815 perm/sec)   p_kst 4.098361e-07   p_cons 8.910602e-01   p_joint 1.803279e-05

Joint ci ratio: 5.843536e-01	ci left: 1.304920e-05	ci right 2.410929e-05	k: 44	n:2450000
Cons ci ratio: 8.756636e-04	ci left: 8.906721e-01	ci right 8.914527e-01	k: 2183104	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
EMG1   2450000 perm   3018 sec   (812 perm/sec)   p_kst 4.081633e-07   p_cons 8.910629e-01   p_joint 1.795918e-05

Joint ci ratio: 5.779669e-01	ci left: 1.334284e-05	ci right 2.447697e-05	k: 45	n:2460000
Cons ci ratio: 8.738703e-04	ci left: 8.906755e-01	ci right 8.914545e-01	k: 2192021	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
EMG1   2460000 perm   3041 sec   (809 perm/sec)   p_kst 4.065041e-07   p_cons 8.910654e-01   p_joint 1.829268e-05

Joint ci ratio: 5.717852e-01	ci left: 1.363476e-05	ci right 2.484104e-05	k: 46	n:2470000
Cons ci ratio: 8.721426e-04	ci left: 8.906667e-01	ci right 8.914442e-01	k: 2200908	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
EMG1   2470000 perm   3064 sec   (806 perm/sec)   p_kst 4.048583e-07   p_cons 8.910559e-01   p_joint 1.862348e-05

Joint ci ratio: 5.717852e-01	ci left: 1.357978e-05	ci right 2.474087e-05	k: 46	n:2480000
Cons ci ratio: 8.704377e-04	ci left: 8.906551e-01	ci right 8.914311e-01	k: 2209788	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
EMG1   2480000 perm   3087 sec   (803 perm/sec)   p_kst 4.032258e-07   p_cons 8.910435e-01   p_joint 1.854839e-05

Joint ci ratio: 5.717853e-01	ci left: 1.352524e-05	ci right 2.464151e-05	k: 46	n:2490000
Cons ci ratio: 8.687212e-04	ci left: 8.906485e-01	ci right 8.914229e-01	k: 2218680	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
EMG1   2490000 perm   3110 sec   (801 perm/sec)   p_kst 4.016064e-07   p_cons 8.910361e-01   p_joint 1.847390e-05

Joint ci ratio: 5.717853e-01	ci left: 1.347114e-05	ci right 2.454295e-05	k: 46	n:2500000
Cons ci ratio: 8.669951e-04	ci left: 8.906463e-01	ci right 8.914192e-01	k: 2227583	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
EMG1   2500000 perm   3133 sec   (798 perm/sec)   p_kst 4.000000e-07   p_cons 8.910332e-01   p_joint 1.840000e-05

Joint ci ratio: 5.717853e-01	ci left: 1.341747e-05	ci right 2.444517e-05	k: 46	n:2510000
Cons ci ratio: 8.652616e-04	ci left: 8.906481e-01	ci right 8.914195e-01	k: 2236496	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
EMG1   2510000 perm   3156 sec   (795 perm/sec)   p_kst 3.984064e-07   p_cons 8.910343e-01   p_joint 1.832669e-05

Joint ci ratio: 5.717853e-01	ci left: 1.336423e-05	ci right 2.434816e-05	k: 46	n:2520000
Cons ci ratio: 8.635155e-04	ci left: 8.906551e-01	ci right 8.914249e-01	k: 2245422	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
EMG1   2520000 perm   3179 sec   (793 perm/sec)   p_kst 3.968254e-07   p_cons 8.910405e-01   p_joint 1.825397e-05

Joint ci ratio: 5.717853e-01	ci left: 1.331141e-05	ci right 2.425192e-05	k: 46	n:2530000
Cons ci ratio: 8.618027e-04	ci left: 8.906569e-01	ci right 8.914252e-01	k: 2254335	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
EMG1   2530000 perm   3203 sec   (790 perm/sec)   p_kst 3.952569e-07   p_cons 8.910415e-01   p_joint 1.818182e-05

Joint ci ratio: 5.717854e-01	ci left: 1.325900e-05	ci right 2.415644e-05	k: 46	n:2540000
Cons ci ratio: 8.600599e-04	ci left: 8.906678e-01	ci right 8.914345e-01	k: 2263271	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
EMG1   2540000 perm   3226 sec   (787 perm/sec)   p_kst 3.937008e-07   p_cons 8.910516e-01   p_joint 1.811024e-05

Joint ci ratio: 5.657978e-01	ci left: 1.354271e-05	ci right 2.450974e-05	k: 47	n:2550000
Cons ci ratio: 8.584109e-04	ci left: 8.906597e-01	ci right 8.914249e-01	k: 2272159	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
EMG1   2550000 perm   3250 sec   (785 perm/sec)   p_kst 3.921569e-07   p_cons 8.910427e-01   p_joint 1.843137e-05

Joint ci ratio: 5.543662e-01	ci left: 1.416037e-05	ci right 2.530484e-05	k: 49	n:2560000
Cons ci ratio: 8.568041e-04	ci left: 8.906442e-01	ci right 8.914080e-01	k: 2281028	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
EMG1   2560000 perm   3273 sec   (782 perm/sec)   p_kst 3.906250e-07   p_cons 8.910266e-01   p_joint 1.914062e-05

Joint ci ratio: 5.543662e-01	ci left: 1.410527e-05	ci right 2.520638e-05	k: 49	n:2570000
Cons ci ratio: 8.551548e-04	ci left: 8.906406e-01	ci right 8.914029e-01	k: 2289927	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
EMG1   2570000 perm   3297 sec   (780 perm/sec)   p_kst 3.891051e-07   p_cons 8.910222e-01   p_joint 1.906615e-05

Joint ci ratio: 5.489043e-01	ci left: 1.438413e-05	ci right 2.554983e-05	k: 50	n:2580000
Cons ci ratio: 8.534758e-04	ci left: 8.906459e-01	ci right 8.914067e-01	k: 2298849	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
EMG1   2580000 perm   3320 sec   (777 perm/sec)   p_kst 3.875969e-07   p_cons 8.910267e-01   p_joint 1.937984e-05

Joint ci ratio: 5.489043e-01	ci left: 1.432859e-05	ci right 2.545118e-05	k: 50	n:2590000
Cons ci ratio: 8.518762e-04	ci left: 8.906353e-01	ci right 8.913947e-01	k: 2307730	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
EMG1   2590000 perm   3344 sec   (775 perm/sec)   p_kst 3.861004e-07   p_cons 8.910154e-01   p_joint 1.930502e-05

Joint ci ratio: 5.489043e-01	ci left: 1.427348e-05	ci right 2.535329e-05	k: 50	n:2600000
Cons ci ratio: 8.501895e-04	ci left: 8.906468e-01	ci right 8.914047e-01	k: 2316668	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
EMG1   2600000 perm   3367 sec   (772 perm/sec)   p_kst 3.846154e-07   p_cons 8.910262e-01   p_joint 1.923077e-05

Joint ci ratio: 5.489043e-01	ci left: 1.421879e-05	ci right 2.525616e-05	k: 50	n:2610000
Cons ci ratio: 8.485948e-04	ci left: 8.906393e-01	ci right 8.913958e-01	k: 2325557	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
EMG1   2610000 perm   3391 sec   (770 perm/sec)   p_kst 3.831418e-07   p_cons 8.910180e-01   p_joint 1.915709e-05

Joint ci ratio: 5.489043e-01	ci left: 1.416452e-05	ci right 2.515976e-05	k: 50	n:2620000
Cons ci ratio: 8.469624e-04	ci left: 8.906427e-01	ci right 8.913977e-01	k: 2334474	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
EMG1   2620000 perm   3415 sec   (767 perm/sec)   p_kst 3.816794e-07   p_cons 8.910206e-01   p_joint 1.908397e-05

Joint ci ratio: 5.489044e-01	ci left: 1.411066e-05	ci right 2.506409e-05	k: 50	n:2630000
Cons ci ratio: 8.453709e-04	ci left: 8.906387e-01	ci right 8.913923e-01	k: 2343372	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
EMG1   2630000 perm   3439 sec   (765 perm/sec)   p_kst 3.802281e-07   p_cons 8.910160e-01   p_joint 1.901141e-05

Joint ci ratio: 5.384479e-01	ci left: 1.471067e-05	ci right 2.582988e-05	k: 52	n:2640000
Cons ci ratio: 8.437126e-04	ci left: 8.906523e-01	ci right 8.914044e-01	k: 2352316	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
EMG1   2640000 perm   3464 sec   (762 perm/sec)   p_kst 3.787879e-07   p_cons 8.910288e-01   p_joint 1.969697e-05

Joint ci ratio: 5.384479e-01	ci left: 1.465516e-05	ci right 2.573241e-05	k: 52	n:2650000
Cons ci ratio: 8.421000e-04	ci left: 8.906574e-01	ci right 8.914081e-01	k: 2361238	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
EMG1   2650000 perm   3488 sec   (760 perm/sec)   p_kst 3.773585e-07   p_cons 8.910332e-01   p_joint 1.962264e-05

Joint ci ratio: 5.384479e-01	ci left: 1.460007e-05	ci right 2.563567e-05	k: 52	n:2660000
Cons ci ratio: 8.405764e-04	ci left: 8.906441e-01	ci right 8.913934e-01	k: 2370111	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
EMG1   2660000 perm   3512 sec   (757 perm/sec)   p_kst 3.759398e-07   p_cons 8.910192e-01   p_joint 1.954887e-05

Joint ci ratio: 5.384480e-01	ci left: 1.454538e-05	ci right 2.553965e-05	k: 52	n:2670000
Cons ci ratio: 8.389995e-04	ci left: 8.906451e-01	ci right 8.913930e-01	k: 2379022	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
EMG1   2670000 perm   3537 sec   (755 perm/sec)   p_kst 3.745318e-07   p_cons 8.910195e-01   p_joint 1.947566e-05

Joint ci ratio: 5.384480e-01	ci left: 1.449111e-05	ci right 2.544436e-05	k: 52	n:2680000
Cons ci ratio: 8.374491e-04	ci left: 8.906420e-01	ci right 8.913885e-01	k: 2387922	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
EMG1   2680000 perm   3562 sec   (752 perm/sec)   p_kst 3.731343e-07   p_cons 8.910157e-01   p_joint 1.940299e-05

Joint ci ratio: 5.334390e-01	ci left: 1.475863e-05	ci right 2.577141e-05	k: 53	n:2690000
Cons ci ratio: 8.359569e-04	ci left: 8.906274e-01	ci right 8.913725e-01	k: 2396791	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
EMG1   2690000 perm   3586 sec   (750 perm/sec)   p_kst 3.717472e-07   p_cons 8.910004e-01   p_joint 1.970260e-05

Joint ci ratio: 5.334390e-01	ci left: 1.470397e-05	ci right 2.567596e-05	k: 53	n:2700000
Cons ci ratio: 8.343963e-04	ci left: 8.906306e-01	ci right 8.913744e-01	k: 2405708	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
EMG1   2700000 perm   3613 sec   (747 perm/sec)   p_kst 3.703704e-07   p_cons 8.910030e-01   p_joint 1.962963e-05

Joint ci ratio: 5.334390e-01	ci left: 1.464971e-05	ci right 2.558122e-05	k: 53	n:2710000
Cons ci ratio: 8.329219e-04	ci left: 8.906158e-01	ci right 8.913583e-01	k: 2414576	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
EMG1   2710000 perm   3638 sec   (745 perm/sec)   p_kst 3.690037e-07   p_cons 8.909875e-01   p_joint 1.955720e-05

Joint ci ratio: 5.334390e-01	ci left: 1.459586e-05	ci right 2.548717e-05	k: 53	n:2720000
Cons ci ratio: 8.313939e-04	ci left: 8.906154e-01	ci right 8.913565e-01	k: 2423483	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
EMG1   2720000 perm   3663 sec   (742 perm/sec)   p_kst 3.676471e-07   p_cons 8.909864e-01   p_joint 1.948529e-05

Joint ci ratio: 5.334391e-01	ci left: 1.454239e-05	ci right 2.539381e-05	k: 53	n:2730000
Cons ci ratio: 8.299087e-04	ci left: 8.906070e-01	ci right 8.913468e-01	k: 2432368	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
EMG1   2730000 perm   3689 sec   (740 perm/sec)   p_kst 3.663004e-07   p_cons 8.909773e-01   p_joint 1.941392e-05

Joint ci ratio: 5.334391e-01	ci left: 1.448932e-05	ci right 2.530113e-05	k: 53	n:2740000
Cons ci ratio: 8.283194e-04	ci left: 8.906249e-01	ci right 8.913633e-01	k: 2441325	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
EMG1   2740000 perm   3714 sec   (738 perm/sec)   p_kst 3.649635e-07   p_cons 8.909945e-01   p_joint 1.934307e-05

Joint ci ratio: 5.285673e-01	ci left: 1.475147e-05	ci right 2.562112e-05	k: 54	n:2750000
Cons ci ratio: 8.267918e-04	ci left: 8.906304e-01	ci right 8.913674e-01	k: 2450248	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
EMG1   2750000 perm   3739 sec   (735 perm/sec)   p_kst 3.636364e-07   p_cons 8.909993e-01   p_joint 1.963636e-05

Joint ci ratio: 5.285673e-01	ci left: 1.469803e-05	ci right 2.552829e-05	k: 54	n:2760000
Cons ci ratio: 8.252171e-04	ci left: 8.906488e-01	ci right 8.913844e-01	k: 2459207	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
EMG1   2760000 perm   3764 sec   (733 perm/sec)   p_kst 3.623188e-07   p_cons 8.910170e-01   p_joint 1.956522e-05

Joint ci ratio: 5.285673e-01	ci left: 1.464496e-05	ci right 2.543613e-05	k: 54	n:2770000
Cons ci ratio: 8.237648e-04	ci left: 8.906404e-01	ci right 8.913747e-01	k: 2468092	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
EMG1   2770000 perm   3789 sec   (731 perm/sec)   p_kst 3.610108e-07   p_cons 8.910079e-01   p_joint 1.949458e-05

Joint ci ratio: 5.334392e-01	ci left: 1.428084e-05	ci right 2.493709e-05	k: 53	n:2780000
Cons ci ratio: 8.221982e-04	ci left: 8.906608e-01	ci right 8.913938e-01	k: 2477057	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
EMG1   2780000 perm   3815 sec   (729 perm/sec)   p_kst 3.597122e-07   p_cons 8.910277e-01   p_joint 1.906475e-05

Joint ci ratio: 5.334392e-01	ci left: 1.422965e-05	ci right 2.484771e-05	k: 53	n:2790000
Cons ci ratio: 8.207511e-04	ci left: 8.906549e-01	ci right 8.913866e-01	k: 2485949	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
EMG1   2790000 perm   3840 sec   (727 perm/sec)   p_kst 3.584229e-07   p_cons 8.910211e-01   p_joint 1.899642e-05

Joint ci ratio: 5.334392e-01	ci left: 1.417883e-05	ci right 2.475897e-05	k: 53	n:2800000
Cons ci ratio: 8.192513e-04	ci left: 8.906634e-01	ci right 8.913937e-01	k: 2494881	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
EMG1   2800000 perm   3866 sec   (724 perm/sec)   p_kst 3.571429e-07   p_cons 8.910289e-01   p_joint 1.892857e-05

Joint ci ratio: 5.334392e-01	ci left: 1.412837e-05	ci right 2.467086e-05	k: 53	n:2810000
Cons ci ratio: 8.178452e-04	ci left: 8.906514e-01	ci right 8.913805e-01	k: 2503756	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
EMG1   2810000 perm   3892 sec   (722 perm/sec)   p_kst 3.558719e-07   p_cons 8.910164e-01   p_joint 1.886121e-05

Joint ci ratio: 5.334392e-01	ci left: 1.407827e-05	ci right 2.458337e-05	k: 53	n:2820000
Cons ci ratio: 8.163836e-04	ci left: 8.906545e-01	ci right 8.913823e-01	k: 2512673	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
EMG1   2820000 perm   3918 sec   (720 perm/sec)   p_kst 3.546099e-07   p_cons 8.910188e-01   p_joint 1.879433e-05

Joint ci ratio: 5.285675e-01	ci left: 1.433447e-05	ci right 2.489685e-05	k: 54	n:2830000
Cons ci ratio: 8.149328e-04	ci left: 8.906569e-01	ci right 8.913833e-01	k: 2521588	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
EMG1   2830000 perm   3944 sec   (718 perm/sec)   p_kst 3.533569e-07   p_cons 8.910205e-01   p_joint 1.908127e-05

Joint ci ratio: 5.285675e-01	ci left: 1.428400e-05	ci right 2.480918e-05	k: 54	n:2840000
Cons ci ratio: 8.136092e-04	ci left: 8.906306e-01	ci right 8.913559e-01	k: 2530422	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
EMG1   2840000 perm   3970 sec   (715 perm/sec)   p_kst 3.521127e-07   p_cons 8.909937e-01   p_joint 1.901408e-05

Joint ci ratio: 5.285675e-01	ci left: 1.423388e-05	ci right 2.472213e-05	k: 54	n:2850000
Cons ci ratio: 8.121863e-04	ci left: 8.906299e-01	ci right 8.913539e-01	k: 2539328	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
EMG1   2850000 perm   3996 sec   (713 perm/sec)   p_kst 3.508772e-07   p_cons 8.909923e-01   p_joint 1.894737e-05

Joint ci ratio: 5.285675e-01	ci left: 1.418411e-05	ci right 2.463569e-05	k: 54	n:2860000
Cons ci ratio: 8.107753e-04	ci left: 8.906281e-01	ci right 8.913508e-01	k: 2548231	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
EMG1   2860000 perm   4022 sec   (711 perm/sec)   p_kst 3.496503e-07   p_cons 8.909899e-01   p_joint 1.888112e-05

Joint ci ratio: 5.285675e-01	ci left: 1.413469e-05	ci right 2.454986e-05	k: 54	n:2870000
Cons ci ratio: 8.093425e-04	ci left: 8.906333e-01	ci right 8.913548e-01	k: 2557154	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
EMG1   2870000 perm   4048 sec   (709 perm/sec)   p_kst 3.484321e-07   p_cons 8.909944e-01   p_joint 1.881533e-05

Joint ci ratio: 5.285676e-01	ci left: 1.408561e-05	ci right 2.446461e-05	k: 54	n:2880000
Cons ci ratio: 8.079939e-04	ci left: 8.906200e-01	ci right 8.913403e-01	k: 2566024	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
EMG1   2880000 perm   4075 sec   (707 perm/sec)   p_kst 3.472222e-07   p_cons 8.909806e-01   p_joint 1.875000e-05

Joint ci ratio: 5.285676e-01	ci left: 1.403687e-05	ci right 2.437996e-05	k: 54	n:2890000
Cons ci ratio: 8.066045e-04	ci left: 8.906183e-01	ci right 8.913373e-01	k: 2574927	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
EMG1   2890000 perm   4102 sec   (705 perm/sec)   p_kst 3.460208e-07   p_cons 8.909782e-01   p_joint 1.868512e-05

Joint ci ratio: 5.285676e-01	ci left: 1.398847e-05	ci right 2.429589e-05	k: 54	n:2900000
Cons ci ratio: 8.052052e-04	ci left: 8.906207e-01	ci right 8.913385e-01	k: 2583842	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
EMG1   2900000 perm   4128 sec   (702 perm/sec)   p_kst 3.448276e-07   p_cons 8.909800e-01   p_joint 1.862069e-05

Joint ci ratio: 5.238269e-01	ci left: 1.423836e-05	ci right 2.460133e-05	k: 55	n:2910000
Cons ci ratio: 8.037846e-04	ci left: 8.906300e-01	ci right 8.913465e-01	k: 2592777	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
EMG1   2910000 perm   4155 sec   (700 perm/sec)   p_kst 3.436426e-07   p_cons 8.909887e-01   p_joint 1.890034e-05

Joint ci ratio: 5.238269e-01	ci left: 1.418959e-05	ci right 2.451707e-05	k: 55	n:2920000
Cons ci ratio: 8.023970e-04	ci left: 8.906331e-01	ci right 8.913483e-01	k: 2601694	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
EMG1   2920000 perm   4182 sec   (698 perm/sec)   p_kst 3.424658e-07   p_cons 8.909911e-01   p_joint 1.883562e-05

Joint ci ratio: 5.238269e-01	ci left: 1.414117e-05	ci right 2.443340e-05	k: 55	n:2930000
Cons ci ratio: 8.010743e-04	ci left: 8.906221e-01	ci right 8.913362e-01	k: 2610570	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
EMG1   2930000 perm   4208 sec   (696 perm/sec)   p_kst 3.412969e-07   p_cons 8.909795e-01   p_joint 1.877133e-05

Joint ci ratio: 5.238270e-01	ci left: 1.409307e-05	ci right 2.435029e-05	k: 55	n:2940000
Cons ci ratio: 7.996979e-04	ci left: 8.906258e-01	ci right 8.913387e-01	k: 2619489	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
EMG1   2940000 perm   4235 sec   (694 perm/sec)   p_kst 3.401361e-07   p_cons 8.909827e-01   p_joint 1.870748e-05

Joint ci ratio: 5.238270e-01	ci left: 1.404529e-05	ci right 2.426775e-05	k: 55	n:2950000
Cons ci ratio: 7.982826e-04	ci left: 8.906408e-01	ci right 8.913524e-01	k: 2628441	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
EMG1   2950000 perm   4262 sec   (692 perm/sec)   p_kst 3.389831e-07   p_cons 8.909969e-01   p_joint 1.864407e-05

Joint ci ratio: 5.238270e-01	ci left: 1.399784e-05	ci right 2.418576e-05	k: 55	n:2960000
Cons ci ratio: 7.969981e-04	ci left: 8.906255e-01	ci right 8.913359e-01	k: 2637304	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
EMG1   2960000 perm   4289 sec   (690 perm/sec)   p_kst 3.378378e-07   p_cons 8.909811e-01   p_joint 1.858108e-05

Joint ci ratio: 5.238270e-01	ci left: 1.395071e-05	ci right 2.410433e-05	k: 55	n:2970000
Cons ci ratio: 7.956632e-04	ci left: 8.906241e-01	ci right 8.913334e-01	k: 2646208	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
EMG1   2970000 perm   4316 sec   (688 perm/sec)   p_kst 3.367003e-07   p_cons 8.909791e-01   p_joint 1.851852e-05

Joint ci ratio: 5.238270e-01	ci left: 1.390390e-05	ci right 2.402344e-05	k: 55	n:2980000
Cons ci ratio: 7.943666e-04	ci left: 8.906150e-01	ci right 8.913231e-01	k: 2655089	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
EMG1   2980000 perm   4343 sec   (686 perm/sec)   p_kst 3.355705e-07   p_cons 8.909695e-01   p_joint 1.845638e-05

Joint ci ratio: 5.238270e-01	ci left: 1.385740e-05	ci right 2.394310e-05	k: 55	n:2990000
Cons ci ratio: 7.930913e-04	ci left: 8.906023e-01	ci right 8.913093e-01	k: 2663959	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
EMG1   2990000 perm   4370 sec   (684 perm/sec)   p_kst 3.344482e-07   p_cons 8.909562e-01   p_joint 1.839465e-05

Joint ci ratio: 5.147162e-01	ci left: 1.439045e-05	ci right 2.461663e-05	k: 57	n:3000000
Cons ci ratio: 7.917814e-04	ci left: 8.905997e-01	ci right 8.913055e-01	k: 2672859	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
EMG1   3000000 perm   4398 sec   (682 perm/sec)   p_kst 3.333333e-07   p_cons 8.909530e-01   p_joint 1.900000e-05

Joint ci ratio: 5.147162e-01	ci left: 1.434264e-05	ci right 2.453485e-05	k: 57	n:3010000
Cons ci ratio: 7.904873e-04	ci left: 8.905948e-01	ci right 8.912994e-01	k: 2681752	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
EMG1   3010000 perm   4424 sec   (680 perm/sec)   p_kst 3.322259e-07   p_cons 8.909475e-01   p_joint 1.893688e-05

Joint ci ratio: 5.147162e-01	ci left: 1.429514e-05	ci right 2.445361e-05	k: 57	n:3020000
Cons ci ratio: 7.891835e-04	ci left: 8.905939e-01	ci right 8.912974e-01	k: 2690657	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
EMG1   3020000 perm   4452 sec   (678 perm/sec)   p_kst 3.311258e-07   p_cons 8.909460e-01   p_joint 1.887417e-05

Joint ci ratio: 5.147162e-01	ci left: 1.424797e-05	ci right 2.437291e-05	k: 57	n:3030000
Cons ci ratio: 7.878206e-04	ci left: 8.906092e-01	ci right 8.913115e-01	k: 2699611	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
EMG1   3030000 perm   4479 sec   (676 perm/sec)   p_kst 3.300330e-07   p_cons 8.909607e-01   p_joint 1.881188e-05

Joint ci ratio: 5.147162e-01	ci left: 1.420110e-05	ci right 2.429273e-05	k: 57	n:3040000
Cons ci ratio: 7.865592e-04	ci left: 8.906011e-01	ci right 8.913022e-01	k: 2708494	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
EMG1   3040000 perm   4507 sec   (675 perm/sec)   p_kst 3.289474e-07   p_cons 8.909520e-01   p_joint 1.875000e-05

Joint ci ratio: 5.147162e-01	ci left: 1.415454e-05	ci right 2.421308e-05	k: 57	n:3050000
Cons ci ratio: 7.852998e-04	ci left: 8.905939e-01	ci right 8.912939e-01	k: 2717380	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
EMG1   3050000 perm   4535 sec   (673 perm/sec)   p_kst 3.278689e-07   p_cons 8.909443e-01   p_joint 1.868852e-05

Joint ci ratio: 5.147163e-01	ci left: 1.410828e-05	ci right 2.413396e-05	k: 57	n:3060000
Cons ci ratio: 7.839648e-04	ci left: 8.906071e-01	ci right 8.913059e-01	k: 2726328	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
EMG1   3060000 perm   4562 sec   (671 perm/sec)   p_kst 3.267974e-07   p_cons 8.909569e-01   p_joint 1.862745e-05

Joint ci ratio: 5.147163e-01	ci left: 1.406232e-05	ci right 2.405534e-05	k: 57	n:3070000
Cons ci ratio: 7.826470e-04	ci left: 8.906176e-01	ci right 8.913152e-01	k: 2735268	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
EMG1   3070000 perm   4590 sec   (669 perm/sec)   p_kst 3.257329e-07   p_cons 8.909668e-01   p_joint 1.856678e-05

Joint ci ratio: 5.147163e-01	ci left: 1.401667e-05	ci right 2.397724e-05	k: 57	n:3080000
Cons ci ratio: 7.813946e-04	ci left: 8.906134e-01	ci right 8.913099e-01	k: 2744163	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
EMG1   3080000 perm   4618 sec   (667 perm/sec)   p_kst 3.246753e-07   p_cons 8.909620e-01   p_joint 1.850649e-05

Joint ci ratio: 5.147163e-01	ci left: 1.397131e-05	ci right 2.389965e-05	k: 57	n:3090000
Cons ci ratio: 7.801170e-04	ci left: 8.906170e-01	ci right 8.913124e-01	k: 2753082	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
EMG1   3090000 perm   4646 sec   (665 perm/sec)   p_kst 3.236246e-07   p_cons 8.909650e-01   p_joint 1.844660e-05

Joint ci ratio: 5.147163e-01	ci left: 1.392624e-05	ci right 2.382255e-05	k: 57	n:3100000
Cons ci ratio: 7.788546e-04	ci left: 8.906183e-01	ci right 8.913126e-01	k: 2761994	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
EMG1   3100000 perm   4674 sec   (663 perm/sec)   p_kst 3.225806e-07   p_cons 8.909658e-01   p_joint 1.838710e-05

Joint ci ratio: 5.147163e-01	ci left: 1.388146e-05	ci right 2.374595e-05	k: 57	n:3110000
Cons ci ratio: 7.776216e-04	ci left: 8.906138e-01	ci right 8.913070e-01	k: 2770888	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
EMG1   3110000 perm   4703 sec   (661 perm/sec)   p_kst 3.215434e-07   p_cons 8.909608e-01   p_joint 1.832797e-05

Joint ci ratio: 5.147164e-01	ci left: 1.383697e-05	ci right 2.366984e-05	k: 57	n:3120000
Cons ci ratio: 7.764021e-04	ci left: 8.906075e-01	ci right 8.912995e-01	k: 2779776	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
EMG1   3120000 perm   4731 sec   (659 perm/sec)   p_kst 3.205128e-07   p_cons 8.909538e-01   p_joint 1.826923e-05

Joint ci ratio: 5.103356e-01	ci left: 1.407090e-05	ci right 2.395471e-05	k: 58	n:3130000
Cons ci ratio: 7.751284e-04	ci left: 8.906162e-01	ci right 8.913071e-01	k: 2788711	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
EMG1   3130000 perm   4759 sec   (658 perm/sec)   p_kst 3.194888e-07   p_cons 8.909620e-01   p_joint 1.853035e-05

Joint ci ratio: 5.543672e-01	ci left: 1.154476e-05	ci right 2.063071e-05	k: 49	n:3140000
Cons ci ratio: 7.738990e-04	ci left: 8.906152e-01	ci right 8.913051e-01	k: 2797616	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
EMG1   3140000 perm   4788 sec   (656 perm/sec)   p_kst 3.184713e-07   p_cons 8.909605e-01   p_joint 1.560510e-05

Joint ci ratio: 5.489053e-01	ci left: 1.178128e-05	ci right 2.092654e-05	k: 50	n:3150000
Cons ci ratio: 7.726640e-04	ci left: 8.906172e-01	ci right 8.913059e-01	k: 2806530	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
EMG1   3150000 perm   4817 sec   (654 perm/sec)   p_kst 3.174603e-07   p_cons 8.909619e-01   p_joint 1.587302e-05

Joint ci ratio: 5.436016e-01	ci left: 1.201675e-05	ci right 2.122007e-05	k: 51	n:3160000
Cons ci ratio: 7.714765e-04	ci left: 8.906087e-01	ci right 8.912963e-01	k: 2815411	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
EMG1   3160000 perm   4845 sec   (652 perm/sec)   p_kst 3.164557e-07   p_cons 8.909528e-01   p_joint 1.613924e-05

Joint ci ratio: 5.436016e-01	ci left: 1.197884e-05	ci right 2.115313e-05	k: 51	n:3170000
Cons ci ratio: 7.702168e-04	ci left: 8.906198e-01	ci right 8.913063e-01	k: 2824354	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
EMG1   3170000 perm   4874 sec   (650 perm/sec)   p_kst 3.154574e-07   p_cons 8.909634e-01   p_joint 1.608833e-05

Joint ci ratio: 5.384488e-01	ci left: 1.221263e-05	ci right 2.144368e-05	k: 52	n:3180000
Cons ci ratio: 7.690504e-04	ci left: 8.906088e-01	ci right 8.912943e-01	k: 2833227	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
EMG1   3180000 perm   4904 sec   (649 perm/sec)   p_kst 3.144654e-07   p_cons 8.909519e-01   p_joint 1.635220e-05

Joint ci ratio: 5.384489e-01	ci left: 1.217435e-05	ci right 2.137646e-05	k: 52	n:3190000
Cons ci ratio: 7.678695e-04	ci left: 8.906029e-01	ci right 8.912873e-01	k: 2842116	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
EMG1   3190000 perm   4933 sec   (647 perm/sec)   p_kst 3.134796e-07   p_cons 8.909455e-01   p_joint 1.630094e-05

Joint ci ratio: 6.198025e-01	ci left: 8.666518e-06	ci right 1.666068e-05	k: 39	n:3200000
Cons ci ratio: 7.665817e-04	ci left: 8.906255e-01	ci right 8.913088e-01	k: 2851096	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
EMG1   3200000 perm   4962 sec   (645 perm/sec)   p_kst 3.125000e-07   p_cons 8.909675e-01   p_joint 1.218750e-05

Joint ci ratio: 6.198025e-01	ci left: 8.639519e-06	ci right 1.660877e-05	k: 39	n:3210000
Cons ci ratio: 7.653360e-04	ci left: 8.906389e-01	ci right 8.913211e-01	k: 2860047	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
EMG1   3210000 perm   4992 sec   (643 perm/sec)   p_kst 3.115265e-07   p_cons 8.909804e-01   p_joint 1.214953e-05

Joint ci ratio: 6.276985e-01	ci left: 8.351274e-06	ci right 1.619809e-05	k: 38	n:3220000
Cons ci ratio: 7.641013e-04	ci left: 8.906510e-01	ci right 8.913321e-01	k: 2868994	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
EMG1   3220000 perm   5021 sec   (641 perm/sec)   p_kst 3.105590e-07   p_cons 8.909919e-01   p_joint 1.180124e-05

Joint ci ratio: 6.276985e-01	ci left: 8.325419e-06	ci right 1.614794e-05	k: 38	n:3230000
Cons ci ratio: 7.629174e-04	ci left: 8.906516e-01	ci right 8.913316e-01	k: 2877904	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
EMG1   3230000 perm   5051 sec   (640 perm/sec)   p_kst 3.095975e-07   p_cons 8.909920e-01   p_joint 1.176471e-05

Joint ci ratio: 6.276985e-01	ci left: 8.299723e-06	ci right 1.609810e-05	k: 38	n:3240000
Cons ci ratio: 7.617221e-04	ci left: 8.906565e-01	ci right 8.913354e-01	k: 2886828	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
EMG1   3240000 perm   5080 sec   (638 perm/sec)   p_kst 3.086420e-07   p_cons 8.909963e-01   p_joint 1.172840e-05

Joint ci ratio: 6.276985e-01	ci left: 8.274186e-06	ci right 1.604857e-05	k: 38	n:3250000
Cons ci ratio: 7.605493e-04	ci left: 8.906570e-01	ci right 8.913349e-01	k: 2895738	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
EMG1   3250000 perm   5110 sec   (636 perm/sec)   p_kst 3.076923e-07   p_cons 8.909963e-01   p_joint 1.169231e-05

Joint ci ratio: 6.276985e-01	ci left: 8.248805e-06	ci right 1.599934e-05	k: 38	n:3260000
Cons ci ratio: 7.594730e-04	ci left: 8.906342e-01	ci right 8.913111e-01	k: 2904572	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
EMG1   3260000 perm   5140 sec   (634 perm/sec)   p_kst 3.067485e-07   p_cons 8.909730e-01   p_joint 1.165644e-05

Joint ci ratio: 6.276985e-01	ci left: 8.223579e-06	ci right 1.595041e-05	k: 38	n:3270000
Cons ci ratio: 7.583666e-04	ci left: 8.906204e-01	ci right 8.912964e-01	k: 2913435	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
EMG1   3270000 perm   5169 sec   (633 perm/sec)   p_kst 3.058104e-07   p_cons 8.909587e-01   p_joint 1.162080e-05

Joint ci ratio: 6.276985e-01	ci left: 8.198507e-06	ci right 1.590179e-05	k: 38	n:3280000
Cons ci ratio: 7.571926e-04	ci left: 8.906253e-01	ci right 8.913002e-01	k: 2922359	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
EMG1   3280000 perm   5199 sec   (631 perm/sec)   p_kst 3.048780e-07   p_cons 8.909631e-01   p_joint 1.158537e-05

Joint ci ratio: 6.276985e-01	ci left: 8.173588e-06	ci right 1.585345e-05	k: 38	n:3290000
Cons ci ratio: 7.560606e-04	ci left: 8.906208e-01	ci right 8.912947e-01	k: 2931252	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
EMG1   3290000 perm   5229 sec   (629 perm/sec)   p_kst 3.039514e-07   p_cons 8.909581e-01   p_joint 1.155015e-05

Joint ci ratio: 6.276986e-01	ci left: 8.148819e-06	ci right 1.580541e-05	k: 38	n:3300000
Cons ci ratio: 7.549620e-04	ci left: 8.906090e-01	ci right 8.912819e-01	k: 2940121	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
EMG1   3300000 perm   5259 sec   (627 perm/sec)   p_kst 3.030303e-07   p_cons 8.909458e-01   p_joint 1.151515e-05

Joint ci ratio: 6.276986e-01	ci left: 8.124200e-06	ci right 1.575766e-05	k: 38	n:3310000
Cons ci ratio: 7.538224e-04	ci left: 8.906090e-01	ci right 8.912809e-01	k: 2949029	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
EMG1   3310000 perm   5289 sec   (626 perm/sec)   p_kst 3.021148e-07   p_cons 8.909453e-01   p_joint 1.148036e-05

Joint ci ratio: 6.276986e-01	ci left: 8.099730e-06	ci right 1.571020e-05	k: 38	n:3320000
Cons ci ratio: 7.526821e-04	ci left: 8.906106e-01	ci right 8.912815e-01	k: 2957942	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
EMG1   3320000 perm   5318 sec   (624 perm/sec)   p_kst 3.012048e-07   p_cons 8.909464e-01   p_joint 1.144578e-05

Joint ci ratio: 6.359042e-01	ci left: 7.823259e-06	ci right 1.531517e-05	k: 37	n:3330000
Cons ci ratio: 7.515226e-04	ci left: 8.906185e-01	ci right 8.912883e-01	k: 2966876	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
EMG1   3330000 perm   5349 sec   (623 perm/sec)   p_kst 3.003003e-07   p_cons 8.909538e-01   p_joint 1.111111e-05

Joint ci ratio: 6.359043e-01	ci left: 7.799836e-06	ci right 1.526932e-05	k: 37	n:3340000
Cons ci ratio: 7.504043e-04	ci left: 8.906170e-01	ci right 8.912859e-01	k: 2975779	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
EMG1   3340000 perm   5379 sec   (621 perm/sec)   p_kst 2.994012e-07   p_cons 8.909518e-01   p_joint 1.107784e-05

Joint ci ratio: 6.359043e-01	ci left: 7.776553e-06	ci right 1.522374e-05	k: 37	n:3350000
Cons ci ratio: 7.493151e-04	ci left: 8.906093e-01	ci right 8.912772e-01	k: 2984661	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
EMG1   3350000 perm   5410 sec   (619 perm/sec)   p_kst 2.985075e-07   p_cons 8.909436e-01   p_joint 1.104478e-05

Joint ci ratio: 6.359043e-01	ci left: 7.753409e-06	ci right 1.517843e-05	k: 37	n:3360000
Cons ci ratio: 7.482433e-04	ci left: 8.905983e-01	ci right 8.912653e-01	k: 2993532	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
EMG1   3360000 perm   5440 sec   (618 perm/sec)   p_kst 2.976190e-07   p_cons 8.909321e-01   p_joint 1.101190e-05

Joint ci ratio: 6.359043e-01	ci left: 7.730401e-06	ci right 1.513339e-05	k: 37	n:3370000
Cons ci ratio: 7.471007e-04	ci left: 8.906071e-01	ci right 8.912730e-01	k: 3002469	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
EMG1   3370000 perm   5470 sec   (616 perm/sec)   p_kst 2.967359e-07   p_cons 8.909404e-01   p_joint 1.097923e-05

Joint ci ratio: 6.359043e-01	ci left: 7.707530e-06	ci right 1.508862e-05	k: 37	n:3380000
Cons ci ratio: 7.459736e-04	ci left: 8.906131e-01	ci right 8.912780e-01	k: 3011397	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
EMG1   3380000 perm   5502 sec   (614 perm/sec)   p_kst 2.958580e-07   p_cons 8.909459e-01   p_joint 1.094675e-05

Joint ci ratio: 6.359043e-01	ci left: 7.684794e-06	ci right 1.504411e-05	k: 37	n:3390000
Cons ci ratio: 7.448527e-04	ci left: 8.906187e-01	ci right 8.912827e-01	k: 3020324	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
EMG1   3390000 perm   5532 sec   (613 perm/sec)   p_kst 2.949853e-07   p_cons 8.909510e-01   p_joint 1.091445e-05

Joint ci ratio: 6.359043e-01	ci left: 7.662192e-06	ci right 1.499986e-05	k: 37	n:3400000
Cons ci ratio: 7.437740e-04	ci left: 8.906147e-01	ci right 8.912776e-01	k: 3029218	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
EMG1   3400000 perm   5563 sec   (611 perm/sec)   p_kst 2.941176e-07   p_cons 8.909465e-01   p_joint 1.088235e-05

Joint ci ratio: 6.359043e-01	ci left: 7.639722e-06	ci right 1.495587e-05	k: 37	n:3410000
Cons ci ratio: 7.426506e-04	ci left: 8.906235e-01	ci right 8.912855e-01	k: 3038156	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
EMG1   3410000 perm   5594 sec   (610 perm/sec)   p_kst 2.932551e-07   p_cons 8.909548e-01   p_joint 1.085044e-05

Joint ci ratio: 6.276987e-01	ci left: 7.862895e-06	ci right 1.525084e-05	k: 38	n:3420000
Cons ci ratio: 7.415803e-04	ci left: 8.906198e-01	ci right 8.912807e-01	k: 3047051	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
EMG1   3420000 perm   5626 sec   (608 perm/sec)   p_kst 2.923977e-07   p_cons 8.909506e-01   p_joint 1.111111e-05

Joint ci ratio: 6.276987e-01	ci left: 7.839971e-06	ci right 1.520637e-05	k: 38	n:3430000
Cons ci ratio: 7.404580e-04	ci left: 8.906309e-01	ci right 8.912909e-01	k: 3055997	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
EMG1   3430000 perm   5657 sec   (606 perm/sec)   p_kst 2.915452e-07   p_cons 8.909612e-01   p_joint 1.107872e-05

Joint ci ratio: 6.276987e-01	ci left: 7.817181e-06	ci right 1.516217e-05	k: 38	n:3440000
Cons ci ratio: 7.393473e-04	ci left: 8.906402e-01	ci right 8.912992e-01	k: 3064937	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
EMG1   3440000 perm   5688 sec   (605 perm/sec)   p_kst 2.906977e-07   p_cons 8.909701e-01   p_joint 1.104651e-05

Joint ci ratio: 6.276987e-01	ci left: 7.794522e-06	ci right 1.511822e-05	k: 38	n:3450000
Cons ci ratio: 7.383077e-04	ci left: 8.906321e-01	ci right 8.912902e-01	k: 3073817	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
EMG1   3450000 perm   5719 sec   (603 perm/sec)   p_kst 2.898551e-07   p_cons 8.909614e-01   p_joint 1.101449e-05

Joint ci ratio: 6.198027e-01	ci left: 8.015276e-06	ci right 1.540872e-05	k: 39	n:3460000
Cons ci ratio: 7.372747e-04	ci left: 8.906234e-01	ci right 8.912806e-01	k: 3082695	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
EMG1   3460000 perm   5750 sec   (602 perm/sec)   p_kst 2.890173e-07   p_cons 8.909523e-01   p_joint 1.127168e-05

Joint ci ratio: 6.198028e-01	ci left: 7.992177e-06	ci right 1.536432e-05	k: 39	n:3470000
Cons ci ratio: 7.362263e-04	ci left: 8.906200e-01	ci right 8.912762e-01	k: 3091591	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
EMG1   3470000 perm   5781 sec   (600 perm/sec)   p_kst 2.881844e-07   p_cons 8.909484e-01   p_joint 1.123919e-05

Joint ci ratio: 6.198028e-01	ci left: 7.969211e-06	ci right 1.532016e-05	k: 39	n:3480000
Cons ci ratio: 7.351738e-04	ci left: 8.906189e-01	ci right 8.912742e-01	k: 3100495	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
EMG1   3480000 perm   5812 sec   (599 perm/sec)   p_kst 2.873563e-07   p_cons 8.909468e-01   p_joint 1.120690e-05

Joint ci ratio: 6.198028e-01	ci left: 7.946376e-06	ci right 1.527627e-05	k: 39	n:3490000
Cons ci ratio: 7.340834e-04	ci left: 8.906290e-01	ci right 8.912833e-01	k: 3109438	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
EMG1   3490000 perm   5844 sec   (597 perm/sec)   p_kst 2.865330e-07   p_cons 8.909564e-01   p_joint 1.117479e-05

Joint ci ratio: 6.444405e-01	ci left: 7.203998e-06	ci right 1.423974e-05	k: 36	n:3500000
Cons ci ratio: 7.330605e-04	ci left: 8.906224e-01	ci right 8.912758e-01	k: 3118323	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
EMG1   3500000 perm   5875 sec   (596 perm/sec)   p_kst 2.857143e-07   p_cons 8.909494e-01   p_joint 1.028571e-05

Joint ci ratio: 6.359044e-01	ci left: 7.422066e-06	ci right 1.452978e-05	k: 37	n:3510000
Cons ci ratio: 7.320343e-04	ci left: 8.906179e-01	ci right 8.912704e-01	k: 3127215	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
EMG1   3510000 perm   5907 sec   (594 perm/sec)   p_kst 2.849003e-07   p_cons 8.909444e-01   p_joint 1.054131e-05

Joint ci ratio: 6.359044e-01	ci left: 7.400981e-06	ci right 1.448850e-05	k: 37	n:3520000
Cons ci ratio: 7.309963e-04	ci left: 8.906177e-01	ci right 8.912692e-01	k: 3136122	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
EMG1   3520000 perm   5938 sec   (593 perm/sec)   p_kst 2.840909e-07   p_cons 8.909438e-01   p_joint 1.051136e-05

Joint ci ratio: 6.359045e-01	ci left: 7.380015e-06	ci right 1.444746e-05	k: 37	n:3530000
Cons ci ratio: 7.299042e-04	ci left: 8.906330e-01	ci right 8.912836e-01	k: 3145084	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
EMG1   3530000 perm   5970 sec   (591 perm/sec)   p_kst 2.832861e-07   p_cons 8.909586e-01   p_joint 1.048159e-05

Joint ci ratio: 6.359045e-01	ci left: 7.359167e-06	ci right 1.440665e-05	k: 37	n:3540000
Cons ci ratio: 7.288414e-04	ci left: 8.906418e-01	ci right 8.912915e-01	k: 3154023	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
EMG1   3540000 perm   6002 sec   (590 perm/sec)   p_kst 2.824859e-07   p_cons 8.909669e-01   p_joint 1.045198e-05

Joint ci ratio: 6.359045e-01	ci left: 7.338437e-06	ci right 1.436606e-05	k: 37	n:3550000
Cons ci ratio: 7.277874e-04	ci left: 8.906494e-01	ci right 8.912981e-01	k: 3162958	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
EMG1   3550000 perm   6034 sec   (588 perm/sec)   p_kst 2.816901e-07   p_cons 8.909741e-01   p_joint 1.042254e-05

Joint ci ratio: 6.359045e-01	ci left: 7.317823e-06	ci right 1.432571e-05	k: 37	n:3560000
Cons ci ratio: 7.267947e-04	ci left: 8.906418e-01	ci right 8.912896e-01	k: 3171839	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
EMG1   3560000 perm   6066 sec   (587 perm/sec)   p_kst 2.808989e-07   p_cons 8.909660e-01   p_joint 1.039326e-05

Joint ci ratio: 6.359045e-01	ci left: 7.297325e-06	ci right 1.428558e-05	k: 37	n:3570000
Cons ci ratio: 7.257715e-04	ci left: 8.906435e-01	ci right 8.912904e-01	k: 3180753	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
EMG1   3570000 perm   6098 sec   (585 perm/sec)   p_kst 2.801120e-07   p_cons 8.909672e-01   p_joint 1.036415e-05

Joint ci ratio: 6.359045e-01	ci left: 7.276942e-06	ci right 1.424568e-05	k: 37	n:3580000
Cons ci ratio: 7.247548e-04	ci left: 8.906446e-01	ci right 8.912906e-01	k: 3189665	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
EMG1   3580000 perm   6130 sec   (584 perm/sec)   p_kst 2.793296e-07   p_cons 8.909679e-01   p_joint 1.033520e-05

Joint ci ratio: 6.276989e-01	ci left: 7.490557e-06	ci right 1.452865e-05	k: 38	n:3590000
Cons ci ratio: 7.237692e-04	ci left: 8.906384e-01	ci right 8.912835e-01	k: 3198551	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
EMG1   3590000 perm   6162 sec   (583 perm/sec)   p_kst 2.785515e-07   p_cons 8.909613e-01   p_joint 1.058496e-05

Joint ci ratio: 6.276989e-01	ci left: 7.469750e-06	ci right 1.448830e-05	k: 38	n:3600000
Cons ci ratio: 7.227701e-04	ci left: 8.906370e-01	ci right 8.912812e-01	k: 3207454	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
EMG1   3600000 perm   6194 sec   (581 perm/sec)   p_kst 2.777778e-07   p_cons 8.909594e-01   p_joint 1.055556e-05

Joint ci ratio: 6.198029e-01	ci left: 7.682230e-06	ci right 1.476847e-05	k: 39	n:3610000
Cons ci ratio: 7.217618e-04	ci left: 8.906392e-01	ci right 8.912826e-01	k: 3216370	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
EMG1   3610000 perm   6227 sec   (580 perm/sec)   p_kst 2.770083e-07   p_cons 8.909612e-01   p_joint 1.080332e-05

Joint ci ratio: 6.198029e-01	ci left: 7.661009e-06	ci right 1.472767e-05	k: 39	n:3620000
Cons ci ratio: 7.207740e-04	ci left: 8.906370e-01	ci right 8.912795e-01	k: 3225270	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
EMG1   3620000 perm   6260 sec   (578 perm/sec)   p_kst 2.762431e-07   p_cons 8.909586e-01   p_joint 1.077348e-05

Joint ci ratio: 6.198029e-01	ci left: 7.639904e-06	ci right 1.468710e-05	k: 39	n:3630000
Cons ci ratio: 7.197464e-04	ci left: 8.906467e-01	ci right 8.912882e-01	k: 3234213	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
EMG1   3630000 perm   6293 sec   (577 perm/sec)   p_kst 2.754821e-07   p_cons 8.909678e-01   p_joint 1.074380e-05

Joint ci ratio: 6.198029e-01	ci left: 7.618915e-06	ci right 1.464675e-05	k: 39	n:3640000
Cons ci ratio: 7.187964e-04	ci left: 8.906365e-01	ci right 8.912772e-01	k: 3243084	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
EMG1   3640000 perm   6326 sec   (575 perm/sec)   p_kst 2.747253e-07   p_cons 8.909571e-01   p_joint 1.071429e-05

Joint ci ratio: 6.198029e-01	ci left: 7.598042e-06	ci right 1.460662e-05	k: 39	n:3650000
Cons ci ratio: 7.178551e-04	ci left: 8.906250e-01	ci right 8.912648e-01	k: 3251950	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
EMG1   3650000 perm   6359 sec   (574 perm/sec)   p_kst 2.739726e-07   p_cons 8.909452e-01   p_joint 1.068493e-05

Joint ci ratio: 6.198029e-01	ci left: 7.577282e-06	ci right 1.456672e-05	k: 39	n:3660000
Cons ci ratio: 7.168168e-04	ci left: 8.906409e-01	ci right 8.912798e-01	k: 3260916	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
EMG1   3660000 perm   6391 sec   (573 perm/sec)   p_kst 2.732240e-07   p_cons 8.909607e-01   p_joint 1.065574e-05

Joint ci ratio: 6.198030e-01	ci left: 7.556635e-06	ci right 1.452702e-05	k: 39	n:3670000
Cons ci ratio: 7.158753e-04	ci left: 8.906316e-01	ci right 8.912697e-01	k: 3269790	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
EMG1   3670000 perm   6425 sec   (571 perm/sec)   p_kst 2.724796e-07   p_cons 8.909510e-01   p_joint 1.062670e-05

Joint ci ratio: 6.198030e-01	ci left: 7.536101e-06	ci right 1.448755e-05	k: 39	n:3680000
Cons ci ratio: 7.149555e-04	ci left: 8.906175e-01	ci right 8.912547e-01	k: 3278646	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
EMG1   3680000 perm   6458 sec   (570 perm/sec)   p_kst 2.717391e-07   p_cons 8.909364e-01   p_joint 1.059783e-05

Joint ci ratio: 6.198030e-01	ci left: 7.515678e-06	ci right 1.444829e-05	k: 39	n:3690000
Cons ci ratio: 7.140312e-04	ci left: 8.906056e-01	ci right 8.912420e-01	k: 3287510	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
EMG1   3690000 perm   6491 sec   (568 perm/sec)   p_kst 2.710027e-07   p_cons 8.909241e-01   p_joint 1.056911e-05

Joint ci ratio: 6.198030e-01	ci left: 7.495365e-06	ci right 1.440924e-05	k: 39	n:3700000
Cons ci ratio: 7.130877e-04	ci left: 8.906000e-01	ci right 8.912356e-01	k: 3296397	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
EMG1   3700000 perm   6525 sec   (567 perm/sec)   p_kst 2.702703e-07   p_cons 8.909181e-01   p_joint 1.054054e-05

Joint ci ratio: 6.198030e-01	ci left: 7.475162e-06	ci right 1.437040e-05	k: 39	n:3710000
Cons ci ratio: 7.121578e-04	ci left: 8.905918e-01	ci right 8.912265e-01	k: 3305274	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
EMG1   3710000 perm   6558 sec   (566 perm/sec)   p_kst 2.695418e-07   p_cons 8.909094e-01   p_joint 1.051213e-05

Joint ci ratio: 6.198030e-01	ci left: 7.455067e-06	ci right 1.433177e-05	k: 39	n:3720000
Cons ci ratio: 7.111469e-04	ci left: 8.906067e-01	ci right 8.912405e-01	k: 3314237	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
EMG1   3720000 perm   6591 sec   (564 perm/sec)   p_kst 2.688172e-07   p_cons 8.909239e-01   p_joint 1.048387e-05

Joint ci ratio: 6.198030e-01	ci left: 7.435081e-06	ci right 1.429335e-05	k: 39	n:3730000
Cons ci ratio: 7.102432e-04	ci left: 8.905934e-01	ci right 8.912264e-01	k: 3323095	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
EMG1   3730000 perm   6624 sec   (563 perm/sec)   p_kst 2.680965e-07   p_cons 8.909102e-01   p_joint 1.045576e-05

Joint ci ratio: 6.198030e-01	ci left: 7.415201e-06	ci right 1.425513e-05	k: 39	n:3740000
Cons ci ratio: 7.092785e-04	ci left: 8.905978e-01	ci right 8.912299e-01	k: 3332019	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
EMG1   3740000 perm   6658 sec   (562 perm/sec)   p_kst 2.673797e-07   p_cons 8.909142e-01   p_joint 1.042781e-05

Joint ci ratio: 6.198030e-01	ci left: 7.395427e-06	ci right 1.421712e-05	k: 39	n:3750000
Cons ci ratio: 7.083226e-04	ci left: 8.906008e-01	ci right 8.912322e-01	k: 3340938	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
EMG1   3750000 perm   6693 sec   (560 perm/sec)   p_kst 2.666667e-07   p_cons 8.909168e-01   p_joint 1.040000e-05

Joint ci ratio: 6.198030e-01	ci left: 7.375758e-06	ci right 1.417930e-05	k: 39	n:3760000
Cons ci ratio: 7.073899e-04	ci left: 8.905986e-01	ci right 8.912290e-01	k: 3349837	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
EMG1   3760000 perm   6726 sec   (559 perm/sec)   p_kst 2.659574e-07   p_cons 8.909141e-01   p_joint 1.037234e-05

Joint ci ratio: 6.198031e-01	ci left: 7.356194e-06	ci right 1.414169e-05	k: 39	n:3770000
Cons ci ratio: 7.064946e-04	ci left: 8.905870e-01	ci right 8.912167e-01	k: 3358701	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
EMG1   3770000 perm   6760 sec   (558 perm/sec)   p_kst 2.652520e-07   p_cons 8.909021e-01   p_joint 1.034483e-05

Joint ci ratio: 6.198031e-01	ci left: 7.336733e-06	ci right 1.410428e-05	k: 39	n:3780000
Cons ci ratio: 7.055585e-04	ci left: 8.905877e-01	ci right 8.912165e-01	k: 3367611	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
EMG1   3780000 perm   6795 sec   (556 perm/sec)   p_kst 2.645503e-07   p_cons 8.909024e-01   p_joint 1.031746e-05

Joint ci ratio: 6.198031e-01	ci left: 7.317375e-06	ci right 1.406707e-05	k: 39	n:3790000
Cons ci ratio: 7.046338e-04	ci left: 8.905862e-01	ci right 8.912142e-01	k: 3376513	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
EMG1   3790000 perm   6829 sec   (555 perm/sec)   p_kst 2.638522e-07   p_cons 8.909005e-01   p_joint 1.029024e-05

Joint ci ratio: 6.198031e-01	ci left: 7.298118e-06	ci right 1.403005e-05	k: 39	n:3800000
Cons ci ratio: 7.037432e-04	ci left: 8.905764e-01	ci right 8.912036e-01	k: 3385383	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
EMG1   3800000 perm   6864 sec   (554 perm/sec)   p_kst 2.631579e-07   p_cons 8.908903e-01   p_joint 1.026316e-05

Joint ci ratio: 6.198031e-01	ci left: 7.278963e-06	ci right 1.399322e-05	k: 39	n:3810000
Cons ci ratio: 7.027649e-04	ci left: 8.905918e-01	ci right 8.912181e-01	k: 3394349	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
EMG1   3810000 perm   6898 sec   (552 perm/sec)   p_kst 2.624672e-07   p_cons 8.909052e-01   p_joint 1.023622e-05

Joint ci ratio: 6.198031e-01	ci left: 7.259908e-06	ci right 1.395659e-05	k: 39	n:3820000
Cons ci ratio: 7.018577e-04	ci left: 8.905885e-01	ci right 8.912140e-01	k: 3403244	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
EMG1   3820000 perm   6932 sec   (551 perm/sec)   p_kst 2.617801e-07   p_cons 8.909016e-01   p_joint 1.020942e-05

Joint ci ratio: 6.198031e-01	ci left: 7.240953e-06	ci right 1.392015e-05	k: 39	n:3830000
Cons ci ratio: 7.009126e-04	ci left: 8.905968e-01	ci right 8.912215e-01	k: 3412183	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
EMG1   3830000 perm   6967 sec   (550 perm/sec)   p_kst 2.610966e-07   p_cons 8.909094e-01   p_joint 1.018277e-05

Joint ci ratio: 6.198031e-01	ci left: 7.222096e-06	ci right 1.388390e-05	k: 39	n:3840000
Cons ci ratio: 6.999807e-04	ci left: 8.906024e-01	ci right 8.912262e-01	k: 3421112	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
EMG1   3840000 perm   7002 sec   (548 perm/sec)   p_kst 2.604167e-07   p_cons 8.909146e-01   p_joint 1.015625e-05

Joint ci ratio: 6.198031e-01	ci left: 7.203338e-06	ci right 1.384784e-05	k: 39	n:3850000
Cons ci ratio: 6.990908e-04	ci left: 8.905973e-01	ci right 8.912203e-01	k: 3430000	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
EMG1   3850000 perm   7036 sec   (547 perm/sec)   p_kst 2.597403e-07   p_cons 8.909091e-01   p_joint 1.012987e-05

Joint ci ratio: 6.198031e-01	ci left: 7.184676e-06	ci right 1.381197e-05	k: 39	n:3860000
Cons ci ratio: 6.982015e-04	ci left: 8.905930e-01	ci right 8.912152e-01	k: 3438891	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
EMG1   3860000 perm   7071 sec   (546 perm/sec)   p_kst 2.590674e-07   p_cons 8.909044e-01   p_joint 1.010363e-05

Joint ci ratio: 6.198031e-01	ci left: 7.166111e-06	ci right 1.377628e-05	k: 39	n:3870000
Cons ci ratio: 6.973165e-04	ci left: 8.905884e-01	ci right 8.912099e-01	k: 3447781	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
EMG1   3870000 perm   7106 sec   (545 perm/sec)   p_kst 2.583979e-07   p_cons 8.908995e-01   p_joint 1.007752e-05

Joint ci ratio: 6.198031e-01	ci left: 7.147642e-06	ci right 1.374077e-05	k: 39	n:3880000
Cons ci ratio: 6.963859e-04	ci left: 8.905976e-01	ci right 8.912183e-01	k: 3456724	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
EMG1   3880000 perm   7140 sec   (543 perm/sec)   p_kst 2.577320e-07   p_cons 8.909082e-01   p_joint 1.005155e-05

Joint ci ratio: 6.198032e-01	ci left: 7.129267e-06	ci right 1.370545e-05	k: 39	n:3890000
Cons ci ratio: 6.954700e-04	ci left: 8.906037e-01	ci right 8.912235e-01	k: 3465655	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
EMG1   3890000 perm   7175 sec   (542 perm/sec)   p_kst 2.570694e-07   p_cons 8.909139e-01   p_joint 1.002571e-05

Joint ci ratio: 6.121979e-01	ci left: 7.327340e-06	ci right 1.396629e-05	k: 40	n:3900000
Cons ci ratio: 6.946018e-04	ci left: 8.905974e-01	ci right 8.912164e-01	k: 3474538	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
EMG1   3900000 perm   7209 sec   (541 perm/sec)   p_kst 2.564103e-07   p_cons 8.909072e-01   p_joint 1.025641e-05

Joint ci ratio: 6.121979e-01	ci left: 7.308600e-06	ci right 1.393057e-05	k: 40	n:3910000
Cons ci ratio: 6.936939e-04	ci left: 8.906031e-01	ci right 8.912214e-01	k: 3483468	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
EMG1   3910000 perm   7244 sec   (540 perm/sec)   p_kst 2.557545e-07   p_cons 8.909125e-01   p_joint 1.023018e-05

Joint ci ratio: 6.121979e-01	ci left: 7.289955e-06	ci right 1.389504e-05	k: 40	n:3920000
Cons ci ratio: 6.928459e-04	ci left: 8.905930e-01	ci right 8.912105e-01	k: 3492336	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
EMG1   3920000 perm   7279 sec   (539 perm/sec)   p_kst 2.551020e-07   p_cons 8.909020e-01   p_joint 1.020408e-05

Joint ci ratio: 6.121979e-01	ci left: 7.271406e-06	ci right 1.385968e-05	k: 40	n:3930000
Cons ci ratio: 6.919412e-04	ci left: 8.905998e-01	ci right 8.912165e-01	k: 3501270	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
EMG1   3930000 perm   7314 sec   (537 perm/sec)   p_kst 2.544529e-07   p_cons 8.909084e-01   p_joint 1.017812e-05

Joint ci ratio: 6.048658e-01	ci left: 7.467601e-06	ci right 1.411701e-05	k: 41	n:3940000
Cons ci ratio: 6.910617e-04	ci left: 8.906004e-01	ci right 8.912163e-01	k: 3510180	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
EMG1   3940000 perm   7349 sec   (536 perm/sec)   p_kst 2.538071e-07   p_cons 8.909086e-01   p_joint 1.040609e-05

Joint ci ratio: 6.048658e-01	ci left: 7.448696e-06	ci right 1.408127e-05	k: 41	n:3950000
Cons ci ratio: 6.902261e-04	ci left: 8.905896e-01	ci right 8.912048e-01	k: 3519045	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
EMG1   3950000 perm   7385 sec   (535 perm/sec)   p_kst 2.531646e-07   p_cons 8.908975e-01   p_joint 1.037975e-05

Joint ci ratio: 6.048658e-01	ci left: 7.429886e-06	ci right 1.404571e-05	k: 41	n:3960000
Cons ci ratio: 6.893540e-04	ci left: 8.905900e-01	ci right 8.912044e-01	k: 3527954	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
EMG1   3960000 perm   7420 sec   (534 perm/sec)   p_kst 2.525253e-07   p_cons 8.908975e-01   p_joint 1.035354e-05

Joint ci ratio: 6.048659e-01	ci left: 7.411171e-06	ci right 1.401033e-05	k: 41	n:3970000
Cons ci ratio: 6.885361e-04	ci left: 8.905760e-01	ci right 8.911897e-01	k: 3536806	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
EMG1   3970000 perm   7456 sec   (532 perm/sec)   p_kst 2.518892e-07   p_cons 8.908831e-01   p_joint 1.032746e-05

Joint ci ratio: 6.048659e-01	ci left: 7.392549e-06	ci right 1.397513e-05	k: 41	n:3980000
Cons ci ratio: 6.876588e-04	ci left: 8.905797e-01	ci right 8.911926e-01	k: 3545728	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
EMG1   3980000 perm   7491 sec   (531 perm/sec)   p_kst 2.512563e-07   p_cons 8.908864e-01   p_joint 1.030151e-05

Joint ci ratio: 6.048659e-01	ci left: 7.374022e-06	ci right 1.394011e-05	k: 41	n:3990000
Cons ci ratio: 6.868070e-04	ci left: 8.905771e-01	ci right 8.911892e-01	k: 3554625	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
EMG1   3990000 perm   7528 sec   (530 perm/sec)   p_kst 2.506266e-07   p_cons 8.908835e-01   p_joint 1.027569e-05

Joint ci ratio: 6.048659e-01	ci left: 7.355587e-06	ci right 1.390526e-05	k: 41	n:4000000
Cons ci ratio: 6.859549e-04	ci left: 8.905755e-01	ci right 8.911869e-01	k: 3563526	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
EMG1   4000000 perm   7563 sec   (529 perm/sec)   p_kst 2.500000e-07   p_cons 8.908815e-01   p_joint 1.025000e-05

Joint ci ratio: 6.048659e-01	ci left: 7.337244e-06	ci right 1.387058e-05	k: 41	n:4010000
Cons ci ratio: 6.850989e-04	ci left: 8.905760e-01	ci right 8.911866e-01	k: 3572435	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
EMG1   4010000 perm   7599 sec   (528 perm/sec)   p_kst 2.493766e-07   p_cons 8.908815e-01   p_joint 1.022444e-05

Joint ci ratio: 6.048659e-01	ci left: 7.318992e-06	ci right 1.383608e-05	k: 41	n:4020000
Cons ci ratio: 6.842330e-04	ci left: 8.905801e-01	ci right 8.911899e-01	k: 3581359	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
EMG1   4020000 perm   7635 sec   (526 perm/sec)   p_kst 2.487562e-07   p_cons 8.908853e-01   p_joint 1.019900e-05

Joint ci ratio: 6.048659e-01	ci left: 7.300830e-06	ci right 1.380174e-05	k: 41	n:4030000
Cons ci ratio: 6.834174e-04	ci left: 8.905709e-01	ci right 8.911799e-01	k: 3590229	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
EMG1   4030000 perm   7672 sec   (525 perm/sec)   p_kst 2.481390e-07   p_cons 8.908757e-01   p_joint 1.017370e-05

Joint ci ratio: 6.048659e-01	ci left: 7.282759e-06	ci right 1.376758e-05	k: 41	n:4040000
Cons ci ratio: 6.826073e-04	ci left: 8.905609e-01	ci right 8.911692e-01	k: 3599096	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
EMG1   4040000 perm   7708 sec   (524 perm/sec)   p_kst 2.475248e-07   p_cons 8.908653e-01   p_joint 1.014851e-05

Joint ci ratio: 6.048659e-01	ci left: 7.264777e-06	ci right 1.373359e-05	k: 41	n:4050000
Cons ci ratio: 6.817863e-04	ci left: 8.905549e-01	ci right 8.911625e-01	k: 3607979	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
EMG1   4050000 perm   7745 sec   (523 perm/sec)   p_kst 2.469136e-07   p_cons 8.908590e-01   p_joint 1.012346e-05

Joint ci ratio: 6.048659e-01	ci left: 7.246883e-06	ci right 1.369976e-05	k: 41	n:4060000
Cons ci ratio: 6.809191e-04	ci left: 8.905630e-01	ci right 8.911699e-01	k: 3616919	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
EMG1   4060000 perm   7781 sec   (522 perm/sec)   p_kst 2.463054e-07   p_cons 8.908667e-01   p_joint 1.009852e-05

Joint ci ratio: 6.048659e-01	ci left: 7.229078e-06	ci right 1.366610e-05	k: 41	n:4070000
Cons ci ratio: 6.801187e-04	ci left: 8.905529e-01	ci right 8.911590e-01	k: 3625785	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
EMG1   4070000 perm   7818 sec   (521 perm/sec)   p_kst 2.457002e-07   p_cons 8.908563e-01   p_joint 1.007371e-05

Joint ci ratio: 6.048659e-01	ci left: 7.211359e-06	ci right 1.363261e-05	k: 41	n:4080000
Cons ci ratio: 6.792792e-04	ci left: 8.905549e-01	ci right 8.911603e-01	k: 3634700	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
EMG1   4080000 perm   7855 sec   (519 perm/sec)   p_kst 2.450980e-07   p_cons 8.908578e-01   p_joint 1.004902e-05

Joint ci ratio: 6.048660e-01	ci left: 7.193728e-06	ci right 1.359927e-05	k: 41	n:4090000
Cons ci ratio: 6.784454e-04	ci left: 8.905561e-01	ci right 8.911607e-01	k: 3643612	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
EMG1   4090000 perm   7892 sec   (518 perm/sec)   p_kst 2.444988e-07   p_cons 8.908587e-01   p_joint 1.002445e-05

Joint ci ratio: 6.048660e-01	ci left: 7.176182e-06	ci right 1.356610e-05	k: 41	n:4100000
Cons ci ratio: 6.775959e-04	ci left: 8.905627e-01	ci right 8.911665e-01	k: 3652546	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
EMG1   4100000 perm   7928 sec   (517 perm/sec)   p_kst 2.439024e-07   p_cons 8.908649e-01   p_joint 1.000000e-05

Joint ci ratio: 6.048660e-01	ci left: 7.158722e-06	ci right 1.353310e-05	k: 41	n:4110000
Cons ci ratio: 6.767606e-04	ci left: 8.905660e-01	ci right 8.911692e-01	k: 3661467	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
EMG1   4110000 perm   7965 sec   (516 perm/sec)   p_kst 2.433090e-07   p_cons 8.908679e-01   p_joint 9.975669e-06

Joint ci ratio: 6.048660e-01	ci left: 7.141346e-06	ci right 1.350025e-05	k: 41	n:4120000
Cons ci ratio: 6.759157e-04	ci left: 8.905730e-01	ci right 8.911754e-01	k: 3670403	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
EMG1   4120000 perm   8002 sec   (515 perm/sec)   p_kst 2.427184e-07   p_cons 8.908745e-01   p_joint 9.951456e-06

Joint ci ratio: 6.048660e-01	ci left: 7.124055e-06	ci right 1.346756e-05	k: 41	n:4130000
Cons ci ratio: 6.751253e-04	ci left: 8.905652e-01	ci right 8.911669e-01	k: 3679278	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
EMG1   4130000 perm   8039 sec   (514 perm/sec)   p_kst 2.421308e-07   p_cons 8.908663e-01   p_joint 9.927361e-06

Joint ci ratio: 6.048660e-01	ci left: 7.106847e-06	ci right 1.343503e-05	k: 41	n:4140000
Cons ci ratio: 6.743033e-04	ci left: 8.905674e-01	ci right 8.911683e-01	k: 3688194	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
EMG1   4140000 perm   8077 sec   (513 perm/sec)   p_kst 2.415459e-07   p_cons 8.908681e-01   p_joint 9.903382e-06

Joint ci ratio: 6.048660e-01	ci left: 7.089722e-06	ci right 1.340266e-05	k: 41	n:4150000
Cons ci ratio: 6.734726e-04	ci left: 8.905729e-01	ci right 8.911731e-01	k: 3697124	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
EMG1   4150000 perm   8114 sec   (511 perm/sec)   p_kst 2.409639e-07   p_cons 8.908733e-01   p_joint 9.879518e-06

Joint ci ratio: 6.048660e-01	ci left: 7.072679e-06	ci right 1.337044e-05	k: 41	n:4160000
Cons ci ratio: 6.726932e-04	ci left: 8.905644e-01	ci right 8.911639e-01	k: 3705996	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
EMG1   4160000 perm   8152 sec   (510 perm/sec)   p_kst 2.403846e-07   p_cons 8.908644e-01   p_joint 9.855769e-06

Joint ci ratio: 6.048660e-01	ci left: 7.055718e-06	ci right 1.333838e-05	k: 41	n:4170000
Cons ci ratio: 6.719206e-04	ci left: 8.905548e-01	ci right 8.911536e-01	k: 3714863	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
EMG1   4170000 perm   8189 sec   (509 perm/sec)   p_kst 2.398082e-07   p_cons 8.908544e-01   p_joint 9.832134e-06

Joint ci ratio: 6.048660e-01	ci left: 7.038839e-06	ci right 1.330647e-05	k: 41	n:4180000
Cons ci ratio: 6.711111e-04	ci left: 8.905567e-01	ci right 8.911548e-01	k: 3723778	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
EMG1   4180000 perm   8227 sec   (508 perm/sec)   p_kst 2.392344e-07   p_cons 8.908560e-01   p_joint 9.808612e-06

Joint ci ratio: 6.048660e-01	ci left: 7.022039e-06	ci right 1.327471e-05	k: 41	n:4190000
Cons ci ratio: 6.702765e-04	ci left: 8.905667e-01	ci right 8.911640e-01	k: 3732727	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
EMG1   4190000 perm   8265 sec   (507 perm/sec)   p_kst 2.386635e-07   p_cons 8.908656e-01   p_joint 9.785203e-06

Joint ci ratio: 5.977913e-01	ci left: 7.207130e-06	ci right 1.351707e-05	k: 42	n:4200000
Cons ci ratio: 6.695056e-04	ci left: 8.905590e-01	ci right 8.911557e-01	k: 3741602	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
EMG1   4200000 perm   8303 sec   (506 perm/sec)   p_kst 2.380952e-07   p_cons 8.908576e-01   p_joint 1.000000e-05

Joint ci ratio: 5.977913e-01	ci left: 7.190011e-06	ci right 1.348496e-05	k: 42	n:4210000
Cons ci ratio: 6.687399e-04	ci left: 8.905507e-01	ci right 8.911466e-01	k: 3750474	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
EMG1   4210000 perm   8341 sec   (505 perm/sec)   p_kst 2.375297e-07   p_cons 8.908489e-01   p_joint 9.976247e-06

Joint ci ratio: 5.977913e-01	ci left: 7.172973e-06	ci right 1.345301e-05	k: 42	n:4220000
Cons ci ratio: 6.679369e-04	ci left: 8.905540e-01	ci right 8.911493e-01	k: 3759395	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
EMG1   4220000 perm   8379 sec   (504 perm/sec)   p_kst 2.369668e-07   p_cons 8.908519e-01   p_joint 9.952607e-06

Joint ci ratio: 5.977913e-01	ci left: 7.156015e-06	ci right 1.342121e-05	k: 42	n:4230000
Cons ci ratio: 6.671563e-04	ci left: 8.905516e-01	ci right 8.911462e-01	k: 3768292	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
EMG1   4230000 perm   8417 sec   (503 perm/sec)   p_kst 2.364066e-07   p_cons 8.908492e-01   p_joint 9.929078e-06

Joint ci ratio: 5.909591e-01	ci left: 7.339470e-06	ci right 1.366052e-05	k: 43	n:4240000
Cons ci ratio: 6.663420e-04	ci left: 8.905599e-01	ci right 8.911537e-01	k: 3777234	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
EMG1   4240000 perm   8455 sec   (502 perm/sec)   p_kst 2.358491e-07   p_cons 8.908571e-01   p_joint 1.014151e-05

Joint ci ratio: 5.909591e-01	ci left: 7.322201e-06	ci right 1.362838e-05	k: 43	n:4250000
Cons ci ratio: 6.654976e-04	ci left: 8.905778e-01	ci right 8.911709e-01	k: 3786217	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
EMG1   4250000 perm   8492 sec   (500 perm/sec)   p_kst 2.352941e-07   p_cons 8.908746e-01   p_joint 1.011765e-05

Joint ci ratio: 5.909591e-01	ci left: 7.305012e-06	ci right 1.359639e-05	k: 43	n:4260000
Cons ci ratio: 6.647287e-04	ci left: 8.905744e-01	ci right 8.911668e-01	k: 3795110	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
EMG1   4260000 perm   8531 sec   (499 perm/sec)   p_kst 2.347418e-07   p_cons 8.908709e-01   p_joint 1.009390e-05

Joint ci ratio: 5.909591e-01	ci left: 7.287905e-06	ci right 1.356455e-05	k: 43	n:4270000
Cons ci ratio: 6.639153e-04	ci left: 8.905849e-01	ci right 8.911766e-01	k: 3804062	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
EMG1   4270000 perm   8569 sec   (498 perm/sec)   p_kst 2.341920e-07   p_cons 8.908810e-01   p_joint 1.007026e-05

Joint ci ratio: 5.909591e-01	ci left: 7.270877e-06	ci right 1.353285e-05	k: 43	n:4280000
Cons ci ratio: 6.631454e-04	ci left: 8.905834e-01	ci right 8.911744e-01	k: 3812963	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
EMG1   4280000 perm   8608 sec   (497 perm/sec)   p_kst 2.336449e-07   p_cons 8.908792e-01   p_joint 1.004673e-05

Joint ci ratio: 5.909591e-01	ci left: 7.253928e-06	ci right 1.350131e-05	k: 43	n:4290000
Cons ci ratio: 6.623799e-04	ci left: 8.905815e-01	ci right 8.911718e-01	k: 3821862	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
EMG1   4290000 perm   8647 sec   (496 perm/sec)   p_kst 2.331002e-07   p_cons 8.908769e-01   p_joint 1.002331e-05

Joint ci ratio: 5.909591e-01	ci left: 7.237059e-06	ci right 1.346991e-05	k: 43	n:4300000
Cons ci ratio: 6.615908e-04	ci left: 8.905873e-01	ci right 8.911769e-01	k: 3830794	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
EMG1   4300000 perm   8686 sec   (495 perm/sec)   p_kst 2.325581e-07   p_cons 8.908823e-01   p_joint 1.000000e-05

Joint ci ratio: 5.909592e-01	ci left: 7.220267e-06	ci right 1.343866e-05	k: 43	n:4310000
Cons ci ratio: 6.607920e-04	ci left: 8.905967e-01	ci right 8.911856e-01	k: 3839742	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
EMG1   4310000 perm   8725 sec   (494 perm/sec)   p_kst 2.320186e-07   p_cons 8.908914e-01   p_joint 9.976798e-06

Joint ci ratio: 5.909592e-01	ci left: 7.203554e-06	ci right 1.340755e-05	k: 43	n:4320000
Cons ci ratio: 6.600141e-04	ci left: 8.906008e-01	ci right 8.911890e-01	k: 3848667	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
EMG1   4320000 perm   8764 sec   (493 perm/sec)   p_kst 2.314815e-07   p_cons 8.908951e-01   p_joint 9.953704e-06

Joint ci ratio: 5.909592e-01	ci left: 7.186917e-06	ci right 1.337659e-05	k: 43	n:4330000
Cons ci ratio: 6.592201e-04	ci left: 8.906104e-01	ci right 8.911979e-01	k: 3857616	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
EMG1   4330000 perm   8802 sec   (492 perm/sec)   p_kst 2.309469e-07   p_cons 8.909044e-01   p_joint 9.930716e-06

Joint ci ratio: 5.909592e-01	ci left: 7.170358e-06	ci right 1.334576e-05	k: 43	n:4340000
Cons ci ratio: 6.584447e-04	ci left: 8.906153e-01	ci right 8.912021e-01	k: 3866545	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
EMG1   4340000 perm   8842 sec   (491 perm/sec)   p_kst 2.304147e-07   p_cons 8.909090e-01   p_joint 9.907834e-06

Joint ci ratio: 5.909592e-01	ci left: 7.153874e-06	ci right 1.331508e-05	k: 43	n:4350000
Cons ci ratio: 6.576945e-04	ci left: 8.906136e-01	ci right 8.911997e-01	k: 3875445	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
EMG1   4350000 perm   8881 sec   (490 perm/sec)   p_kst 2.298851e-07   p_cons 8.909069e-01   p_joint 9.885057e-06

Joint ci ratio: 5.909592e-01	ci left: 7.137466e-06	ci right 1.328455e-05	k: 43	n:4360000
Cons ci ratio: 6.569336e-04	ci left: 8.906157e-01	ci right 8.912012e-01	k: 3884362	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
EMG1   4360000 perm   8920 sec   (489 perm/sec)   p_kst 2.293578e-07   p_cons 8.909087e-01   p_joint 9.862385e-06

Joint ci ratio: 5.909592e-01	ci left: 7.121133e-06	ci right 1.325415e-05	k: 43	n:4370000
Cons ci ratio: 6.561639e-04	ci left: 8.906213e-01	ci right 8.912061e-01	k: 3893294	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
EMG1   4370000 perm   8959 sec   (488 perm/sec)   p_kst 2.288330e-07   p_cons 8.909140e-01   p_joint 9.839817e-06

Joint ci ratio: 5.909592e-01	ci left: 7.104875e-06	ci right 1.322389e-05	k: 43	n:4380000
Cons ci ratio: 6.554361e-04	ci left: 8.906152e-01	ci right 8.911994e-01	k: 3902175	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
EMG1   4380000 perm   8998 sec   (487 perm/sec)   p_kst 2.283105e-07   p_cons 8.909075e-01   p_joint 9.817352e-06

Joint ci ratio: 5.909592e-01	ci left: 7.088691e-06	ci right 1.319376e-05	k: 43	n:4390000
Cons ci ratio: 6.546892e-04	ci left: 8.906155e-01	ci right 8.911990e-01	k: 3911084	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
EMG1   4390000 perm   9037 sec   (486 perm/sec)   p_kst 2.277904e-07   p_cons 8.909075e-01   p_joint 9.794989e-06

Joint ci ratio: 5.909592e-01	ci left: 7.072580e-06	ci right 1.316378e-05	k: 43	n:4400000
Cons ci ratio: 6.539525e-04	ci left: 8.906136e-01	ci right 8.911964e-01	k: 3919983	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
EMG1   4400000 perm   9077 sec   (485 perm/sec)   p_kst 2.272727e-07   p_cons 8.909052e-01   p_joint 9.772727e-06

Joint ci ratio: 5.909592e-01	ci left: 7.056542e-06	ci right 1.313393e-05	k: 43	n:4410000
Cons ci ratio: 6.531939e-04	ci left: 8.906189e-01	ci right 8.912010e-01	k: 3928914	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
EMG1   4410000 perm   9116 sec   (484 perm/sec)   p_kst 2.267574e-07   p_cons 8.909102e-01   p_joint 9.750567e-06

Joint ci ratio: 5.909592e-01	ci left: 7.040577e-06	ci right 1.310421e-05	k: 43	n:4420000
Cons ci ratio: 6.524706e-04	ci left: 8.906144e-01	ci right 8.911959e-01	k: 3937802	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
EMG1   4420000 perm   9157 sec   (483 perm/sec)   p_kst 2.262443e-07   p_cons 8.909054e-01   p_joint 9.728507e-06

Joint ci ratio: 5.909592e-01	ci left: 7.024684e-06	ci right 1.307463e-05	k: 43	n:4430000
Cons ci ratio: 6.517194e-04	ci left: 8.906190e-01	ci right 8.911999e-01	k: 3946730	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
EMG1   4430000 perm   9197 sec   (482 perm/sec)   p_kst 2.257336e-07   p_cons 8.909097e-01   p_joint 9.706546e-06

Joint ci ratio: 5.909592e-01	ci left: 7.008863e-06	ci right 1.304518e-05	k: 43	n:4440000
Cons ci ratio: 6.509701e-04	ci left: 8.906238e-01	ci right 8.912040e-01	k: 3955659	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
EMG1   4440000 perm   9237 sec   (481 perm/sec)   p_kst 2.252252e-07   p_cons 8.909142e-01   p_joint 9.684685e-06

Joint ci ratio: 5.909592e-01	ci left: 6.993113e-06	ci right 1.301587e-05	k: 43	n:4450000
Cons ci ratio: 6.502474e-04	ci left: 8.906214e-01	ci right 8.912010e-01	k: 3964556	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
EMG1   4450000 perm   9277 sec   (480 perm/sec)   p_kst 2.247191e-07   p_cons 8.909115e-01   p_joint 9.662921e-06

Joint ci ratio: 5.909593e-01	ci left: 6.977433e-06	ci right 1.298669e-05	k: 43	n:4460000
Cons ci ratio: 6.494881e-04	ci left: 8.906307e-01	ci right 8.912096e-01	k: 3973505	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
EMG1   4460000 perm   9316 sec   (479 perm/sec)   p_kst 2.242152e-07   p_cons 8.909204e-01   p_joint 9.641256e-06

Joint ci ratio: 5.909593e-01	ci left: 6.961824e-06	ci right 1.295763e-05	k: 43	n:4470000
Cons ci ratio: 6.487442e-04	ci left: 8.906362e-01	ci right 8.912143e-01	k: 3982437	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
EMG1   4470000 perm   9356 sec   (478 perm/sec)   p_kst 2.237136e-07   p_cons 8.909255e-01   p_joint 9.619687e-06

Joint ci ratio: 5.909593e-01	ci left: 6.946284e-06	ci right 1.292871e-05	k: 43	n:4480000
Cons ci ratio: 6.480192e-04	ci left: 8.906366e-01	ci right 8.912142e-01	k: 3991347	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
EMG1   4480000 perm   9397 sec   (477 perm/sec)   p_kst 2.232143e-07   p_cons 8.909257e-01   p_joint 9.598214e-06

Joint ci ratio: 5.909593e-01	ci left: 6.930813e-06	ci right 1.289992e-05	k: 43	n:4490000
Cons ci ratio: 6.472966e-04	ci left: 8.906371e-01	ci right 8.912140e-01	k: 4000257	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
EMG1   4490000 perm   9437 sec   (476 perm/sec)   p_kst 2.227171e-07   p_cons 8.909258e-01   p_joint 9.576837e-06

Joint ci ratio: 5.909593e-01	ci left: 6.915411e-06	ci right 1.287125e-05	k: 43	n:4500000
Cons ci ratio: 6.465786e-04	ci left: 8.906369e-01	ci right 8.912132e-01	k: 4009164	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
EMG1   4500000 perm   9477 sec   (475 perm/sec)   p_kst 2.222222e-07   p_cons 8.909253e-01   p_joint 9.555556e-06

Joint ci ratio: 5.909593e-01	ci left: 6.900078e-06	ci right 1.284271e-05	k: 43	n:4510000
Cons ci ratio: 6.458793e-04	ci left: 8.906319e-01	ci right 8.912075e-01	k: 4018049	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
EMG1   4510000 perm   9516 sec   (474 perm/sec)   p_kst 2.217295e-07   p_cons 8.909200e-01   p_joint 9.534368e-06

Joint ci ratio: 5.909593e-01	ci left: 6.884812e-06	ci right 1.281430e-05	k: 43	n:4520000
Cons ci ratio: 6.451660e-04	ci left: 8.906317e-01	ci right 8.912067e-01	k: 4026956	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
EMG1   4520000 perm   9556 sec   (473 perm/sec)   p_kst 2.212389e-07   p_cons 8.909195e-01   p_joint 9.513274e-06

Joint ci ratio: 5.909593e-01	ci left: 6.869614e-06	ci right 1.278601e-05	k: 43	n:4530000
Cons ci ratio: 6.444881e-04	ci left: 8.906216e-01	ci right 8.911960e-01	k: 4035818	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
EMG1   4530000 perm   9596 sec   (472 perm/sec)   p_kst 2.207506e-07   p_cons 8.909091e-01   p_joint 9.492274e-06

Joint ci ratio: 5.909593e-01	ci left: 6.854482e-06	ci right 1.275785e-05	k: 43	n:4540000
Cons ci ratio: 6.437444e-04	ci left: 8.906320e-01	ci right 8.912058e-01	k: 4044773	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
EMG1   4540000 perm   9636 sec   (471 perm/sec)   p_kst 2.202643e-07   p_cons 8.909192e-01   p_joint 9.471366e-06

Joint ci ratio: 5.909593e-01	ci left: 6.839418e-06	ci right 1.272981e-05	k: 43	n:4550000
Cons ci ratio: 6.430658e-04	ci left: 8.906235e-01	ci right 8.911966e-01	k: 4053642	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
EMG1   4550000 perm   9677 sec   (470 perm/sec)   p_kst 2.197802e-07   p_cons 8.909103e-01   p_joint 9.450549e-06

Joint ci ratio: 5.909593e-01	ci left: 6.824419e-06	ci right 1.270189e-05	k: 43	n:4560000
Cons ci ratio: 6.423495e-04	ci left: 8.906271e-01	ci right 8.911996e-01	k: 4062566	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
EMG1   4560000 perm   9717 sec   (469 perm/sec)   p_kst 2.192982e-07   p_cons 8.909136e-01   p_joint 9.429825e-06

Joint ci ratio: 5.843562e-01	ci left: 6.995734e-06	ci right 1.292513e-05	k: 44	n:4570000
Cons ci ratio: 6.416161e-04	ci left: 8.906366e-01	ci right 8.912084e-01	k: 4071517	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
EMG1   4570000 perm   9757 sec   (468 perm/sec)   p_kst 2.188184e-07   p_cons 8.909228e-01   p_joint 9.628009e-06

Joint ci ratio: 5.843562e-01	ci left: 6.980460e-06	ci right 1.289691e-05	k: 44	n:4580000
Cons ci ratio: 6.409270e-04	ci left: 8.906334e-01	ci right 8.912046e-01	k: 4080410	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
EMG1   4580000 perm   9798 sec   (467 perm/sec)   p_kst 2.183406e-07   p_cons 8.909192e-01   p_joint 9.606987e-06

Joint ci ratio: 5.779695e-01	ci left: 7.151056e-06	ci right 1.311840e-05	k: 45	n:4590000
Cons ci ratio: 6.402264e-04	ci left: 8.906343e-01	ci right 8.912049e-01	k: 4089322	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
EMG1   4590000 perm   9839 sec   (467 perm/sec)   p_kst 2.178649e-07   p_cons 8.909198e-01   p_joint 9.803922e-06

Joint ci ratio: 5.779695e-01	ci left: 7.135511e-06	ci right 1.308988e-05	k: 45	n:4600000
Cons ci ratio: 6.395453e-04	ci left: 8.906300e-01	ci right 8.912000e-01	k: 4098210	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
EMG1   4600000 perm   9879 sec   (466 perm/sec)   p_kst 2.173913e-07   p_cons 8.909152e-01   p_joint 9.782609e-06

Joint ci ratio: 5.779695e-01	ci left: 7.120032e-06	ci right 1.306148e-05	k: 45	n:4610000
Cons ci ratio: 6.388706e-04	ci left: 8.906244e-01	ci right 8.911938e-01	k: 4107092	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
EMG1   4610000 perm   9920 sec   (465 perm/sec)   p_kst 2.169197e-07   p_cons 8.909093e-01   p_joint 9.761388e-06

Joint ci ratio: 5.779695e-01	ci left: 7.104621e-06	ci right 1.303321e-05	k: 45	n:4620000
Cons ci ratio: 6.381583e-04	ci left: 8.906310e-01	ci right 8.911997e-01	k: 4116030	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
EMG1   4620000 perm   9962 sec   (464 perm/sec)   p_kst 2.164502e-07   p_cons 8.909156e-01   p_joint 9.740260e-06

Joint ci ratio: 5.779695e-01	ci left: 7.089276e-06	ci right 1.300506e-05	k: 45	n:4630000
Cons ci ratio: 6.374639e-04	ci left: 8.906328e-01	ci right 8.912009e-01	k: 4124946	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
EMG1   4630000 perm   10003 sec   (463 perm/sec)   p_kst 2.159827e-07   p_cons 8.909171e-01   p_joint 9.719222e-06

Joint ci ratio: 5.779695e-01	ci left: 7.073997e-06	ci right 1.297703e-05	k: 45	n:4640000
Cons ci ratio: 6.368000e-04	ci left: 8.906259e-01	ci right 8.911934e-01	k: 4133822	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
EMG1   4640000 perm   10044 sec   (462 perm/sec)   p_kst 2.155172e-07   p_cons 8.909099e-01   p_joint 9.698276e-06

Joint ci ratio: 5.779695e-01	ci left: 7.058785e-06	ci right 1.294913e-05	k: 45	n:4650000
Cons ci ratio: 6.361291e-04	ci left: 8.906219e-01	ci right 8.911888e-01	k: 4142711	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
EMG1   4650000 perm   10086 sec   (461 perm/sec)   p_kst 2.150538e-07   p_cons 8.909056e-01   p_joint 9.677419e-06

Joint ci ratio: 5.717878e-01	ci left: 7.227000e-06	ci right 1.316684e-05	k: 46	n:4660000
Cons ci ratio: 6.354160e-04	ci left: 8.906314e-01	ci right 8.911977e-01	k: 4151663	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
EMG1   4660000 perm   10128 sec   (460 perm/sec)   p_kst 2.145923e-07   p_cons 8.909148e-01   p_joint 9.871245e-06

Joint ci ratio: 5.717878e-01	ci left: 7.211525e-06	ci right 1.313864e-05	k: 46	n:4670000
Cons ci ratio: 6.347781e-04	ci left: 8.906186e-01	ci right 8.911843e-01	k: 4160511	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
EMG1   4670000 perm   10170 sec   (459 perm/sec)   p_kst 2.141328e-07   p_cons 8.909017e-01   p_joint 9.850107e-06

Joint ci ratio: 5.717878e-01	ci left: 7.196116e-06	ci right 1.311057e-05	k: 46	n:4680000
Cons ci ratio: 6.341037e-04	ci left: 8.906176e-01	ci right 8.911827e-01	k: 4169414	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
EMG1   4680000 perm   10211 sec   (458 perm/sec)   p_kst 2.136752e-07   p_cons 8.909004e-01   p_joint 9.829060e-06

Joint ci ratio: 5.717878e-01	ci left: 7.180772e-06	ci right 1.308261e-05	k: 46	n:4690000
Cons ci ratio: 6.334357e-04	ci left: 8.906154e-01	ci right 8.911799e-01	k: 4178311	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
EMG1   4690000 perm   10253 sec   (457 perm/sec)   p_kst 2.132196e-07   p_cons 8.908979e-01   p_joint 9.808102e-06

Joint ci ratio: 5.717878e-01	ci left: 7.165494e-06	ci right 1.305478e-05	k: 46	n:4700000
Cons ci ratio: 6.327781e-04	ci left: 8.906106e-01	ci right 8.911745e-01	k: 4187196	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
EMG1   4700000 perm   10295 sec   (457 perm/sec)   p_kst 2.127660e-07   p_cons 8.908928e-01   p_joint 9.787234e-06

Joint ci ratio: 5.717879e-01	ci left: 7.150281e-06	ci right 1.302706e-05	k: 46	n:4710000
Cons ci ratio: 6.321025e-04	ci left: 8.906119e-01	ci right 8.911753e-01	k: 4196110	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
EMG1   4710000 perm   10336 sec   (456 perm/sec)   p_kst 2.123142e-07   p_cons 8.908938e-01   p_joint 9.766454e-06

Joint ci ratio: 5.717879e-01	ci left: 7.135132e-06	ci right 1.299946e-05	k: 46	n:4720000
Cons ci ratio: 6.314476e-04	ci left: 8.906076e-01	ci right 8.911703e-01	k: 4204997	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
EMG1   4720000 perm   10379 sec   (455 perm/sec)   p_kst 2.118644e-07   p_cons 8.908892e-01   p_joint 9.745763e-06

Joint ci ratio: 5.717879e-01	ci left: 7.120047e-06	ci right 1.297198e-05	k: 46	n:4730000
Cons ci ratio: 6.307550e-04	ci left: 8.906155e-01	ci right 8.911777e-01	k: 4213942	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
EMG1   4730000 perm   10420 sec   (454 perm/sec)   p_kst 2.114165e-07   p_cons 8.908968e-01   p_joint 9.725159e-06

Joint ci ratio: 5.717879e-01	ci left: 7.105026e-06	ci right 1.294461e-05	k: 46	n:4740000
Cons ci ratio: 6.300982e-04	ci left: 8.906131e-01	ci right 8.911746e-01	k: 4222838	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
EMG1   4740000 perm   10463 sec   (453 perm/sec)   p_kst 2.109705e-07   p_cons 8.908941e-01   p_joint 9.704641e-06

Joint ci ratio: 5.717879e-01	ci left: 7.090068e-06	ci right 1.291736e-05	k: 46	n:4750000
Cons ci ratio: 6.294195e-04	ci left: 8.906180e-01	ci right 8.911790e-01	k: 4231769	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
EMG1   4750000 perm   10505 sec   (452 perm/sec)   p_kst 2.105263e-07   p_cons 8.908987e-01   p_joint 9.684211e-06

Joint ci ratio: 5.717879e-01	ci left: 7.075173e-06	ci right 1.289022e-05	k: 46	n:4760000
Cons ci ratio: 6.287363e-04	ci left: 8.906251e-01	ci right 8.911854e-01	k: 4240710	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
EMG1   4760000 perm   10547 sec   (451 perm/sec)   p_kst 2.100840e-07   p_cons 8.909055e-01   p_joint 9.663866e-06

Joint ci ratio: 5.717879e-01	ci left: 7.060340e-06	ci right 1.286320e-05	k: 46	n:4770000
Cons ci ratio: 6.280573e-04	ci left: 8.906314e-01	ci right 8.911912e-01	k: 4249648	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
EMG1   4770000 perm   10589 sec   (450 perm/sec)   p_kst 2.096436e-07   p_cons 8.909115e-01   p_joint 9.643606e-06

Joint ci ratio: 5.717879e-01	ci left: 7.045569e-06	ci right 1.283629e-05	k: 46	n:4780000
Cons ci ratio: 6.274048e-04	ci left: 8.906302e-01	ci right 8.911894e-01	k: 4258550	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
EMG1   4780000 perm   10631 sec   (450 perm/sec)   p_kst 2.092050e-07   p_cons 8.909100e-01   p_joint 9.623431e-06

Joint ci ratio: 5.717879e-01	ci left: 7.030860e-06	ci right 1.280949e-05	k: 46	n:4790000
Cons ci ratio: 6.267213e-04	ci left: 8.906393e-01	ci right 8.911978e-01	k: 4267501	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
EMG1   4790000 perm   10673 sec   (449 perm/sec)   p_kst 2.087683e-07   p_cons 8.909188e-01   p_joint 9.603340e-06

Joint ci ratio: 5.717879e-01	ci left: 7.016213e-06	ci right 1.278280e-05	k: 46	n:4800000
Cons ci ratio: 6.260803e-04	ci left: 8.906358e-01	ci right 8.911938e-01	k: 4276392	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
EMG1   4800000 perm   10716 sec   (448 perm/sec)   p_kst 2.083333e-07   p_cons 8.909150e-01   p_joint 9.583333e-06

Joint ci ratio: 5.717879e-01	ci left: 7.001626e-06	ci right 1.275623e-05	k: 46	n:4810000
Cons ci ratio: 6.254527e-04	ci left: 8.906287e-01	ci right 8.911862e-01	k: 4285266	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
EMG1   4810000 perm   10759 sec   (447 perm/sec)   p_kst 2.079002e-07   p_cons 8.909077e-01   p_joint 9.563410e-06

Joint ci ratio: 5.658004e-01	ci left: 7.164704e-06	ci right 1.296679e-05	k: 47	n:4820000
Cons ci ratio: 6.248069e-04	ci left: 8.906280e-01	ci right 8.911848e-01	k: 4294170	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
EMG1   4820000 perm   10801 sec   (446 perm/sec)   p_kst 2.074689e-07   p_cons 8.909066e-01   p_joint 9.751037e-06

Joint ci ratio: 5.658004e-01	ci left: 7.149870e-06	ci right 1.293995e-05	k: 47	n:4830000
Cons ci ratio: 6.241306e-04	ci left: 8.906374e-01	ci right 8.911936e-01	k: 4303123	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
EMG1   4830000 perm   10844 sec   (445 perm/sec)   p_kst 2.070393e-07   p_cons 8.909157e-01   p_joint 9.730849e-06

Joint ci ratio: 5.658004e-01	ci left: 7.135098e-06	ci right 1.291321e-05	k: 47	n:4840000
Cons ci ratio: 6.234955e-04	ci left: 8.906345e-01	ci right 8.911902e-01	k: 4312017	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
EMG1   4840000 perm   10887 sec   (445 perm/sec)   p_kst 2.066116e-07   p_cons 8.909126e-01   p_joint 9.710744e-06

Joint ci ratio: 5.658004e-01	ci left: 7.120386e-06	ci right 1.288658e-05	k: 47	n:4850000
Cons ci ratio: 6.228908e-04	ci left: 8.906228e-01	ci right 8.911779e-01	k: 4320868	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
EMG1   4850000 perm   10931 sec   (444 perm/sec)   p_kst 2.061856e-07   p_cons 8.909006e-01   p_joint 9.690722e-06

Joint ci ratio: 5.658004e-01	ci left: 7.105735e-06	ci right 1.286007e-05	k: 47	n:4860000
Cons ci ratio: 6.222694e-04	ci left: 8.906169e-01	ci right 8.911715e-01	k: 4329747	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
EMG1   4860000 perm   10974 sec   (443 perm/sec)   p_kst 2.057613e-07   p_cons 8.908944e-01   p_joint 9.670782e-06

Joint ci ratio: 5.658004e-01	ci left: 7.091144e-06	ci right 1.283366e-05	k: 47	n:4870000
Cons ci ratio: 6.216000e-04	ci left: 8.906267e-01	ci right 8.911807e-01	k: 4338702	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
EMG1   4870000 perm   11018 sec   (442 perm/sec)   p_kst 2.053388e-07   p_cons 8.909039e-01   p_joint 9.650924e-06

Joint ci ratio: 5.658004e-01	ci left: 7.076613e-06	ci right 1.280736e-05	k: 47	n:4880000
Cons ci ratio: 6.209706e-04	ci left: 8.906245e-01	ci right 8.911779e-01	k: 4347599	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
EMG1   4880000 perm   11061 sec   (441 perm/sec)   p_kst 2.049180e-07   p_cons 8.909014e-01   p_joint 9.631148e-06

Joint ci ratio: 5.658004e-01	ci left: 7.062142e-06	ci right 1.278117e-05	k: 47	n:4890000
Cons ci ratio: 6.203524e-04	ci left: 8.906195e-01	ci right 8.911723e-01	k: 4356482	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
EMG1   4890000 perm   11104 sec   (440 perm/sec)   p_kst 2.044990e-07   p_cons 8.908961e-01   p_joint 9.611452e-06

Joint ci ratio: 5.658004e-01	ci left: 7.047729e-06	ci right 1.275509e-05	k: 47	n:4900000
Cons ci ratio: 6.196793e-04	ci left: 8.906322e-01	ci right 8.911845e-01	k: 4365452	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
EMG1   4900000 perm   11147 sec   (440 perm/sec)   p_kst 2.040816e-07   p_cons 8.909086e-01   p_joint 9.591837e-06

Joint ci ratio: 5.599971e-01	ci left: 7.208035e-06	ci right 1.296149e-05	k: 48	n:4910000
Cons ci ratio: 6.190564e-04	ci left: 8.906298e-01	ci right 8.911815e-01	k: 4374348	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
EMG1   4910000 perm   11190 sec   (439 perm/sec)   p_kst 2.036660e-07   p_cons 8.909059e-01   p_joint 9.775967e-06

Joint ci ratio: 5.599972e-01	ci left: 7.193385e-06	ci right 1.293515e-05	k: 48	n:4920000
Cons ci ratio: 6.184193e-04	ci left: 8.906325e-01	ci right 8.911837e-01	k: 4383269	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
EMG1   4920000 perm   11234 sec   (438 perm/sec)   p_kst 2.032520e-07   p_cons 8.909083e-01   p_joint 9.756098e-06

Joint ci ratio: 5.599972e-01	ci left: 7.178794e-06	ci right 1.290891e-05	k: 48	n:4930000
Cons ci ratio: 6.177899e-04	ci left: 8.906334e-01	ci right 8.911840e-01	k: 4392181	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
EMG1   4930000 perm   11278 sec   (437 perm/sec)   p_kst 2.028398e-07   p_cons 8.909089e-01   p_joint 9.736308e-06

Joint ci ratio: 5.599972e-01	ci left: 7.164262e-06	ci right 1.288278e-05	k: 48	n:4940000
Cons ci ratio: 6.171804e-04	ci left: 8.906286e-01	ci right 8.911786e-01	k: 4401065	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
EMG1   4940000 perm   11324 sec   (436 perm/sec)   p_kst 2.024291e-07   p_cons 8.909038e-01   p_joint 9.716599e-06

Joint ci ratio: 5.599972e-01	ci left: 7.149788e-06	ci right 1.285675e-05	k: 48	n:4950000
Cons ci ratio: 6.165881e-04	ci left: 8.906190e-01	ci right 8.911685e-01	k: 4409925	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
EMG1   4950000 perm   11368 sec   (435 perm/sec)   p_kst 2.020202e-07   p_cons 8.908939e-01   p_joint 9.696970e-06

Joint ci ratio: 5.599972e-01	ci left: 7.135373e-06	ci right 1.283083e-05	k: 48	n:4960000
Cons ci ratio: 6.159751e-04	ci left: 8.906164e-01	ci right 8.911654e-01	k: 4418820	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
EMG1   4960000 perm   11412 sec   (435 perm/sec)   p_kst 2.016129e-07   p_cons 8.908911e-01   p_joint 9.677419e-06

Joint ci ratio: 5.543689e-01	ci left: 7.293866e-06	ci right 1.303430e-05	k: 49	n:4970000
Cons ci ratio: 6.153818e-04	ci left: 8.906083e-01	ci right 8.911567e-01	k: 4427687	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
EMG1   4970000 perm   11457 sec   (434 perm/sec)   p_kst 2.012072e-07   p_cons 8.908827e-01   p_joint 9.859155e-06

Joint ci ratio: 5.543689e-01	ci left: 7.279219e-06	ci right 1.300813e-05	k: 49	n:4980000
Cons ci ratio: 6.147876e-04	ci left: 8.906009e-01	ci right 8.911488e-01	k: 4436558	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
EMG1   4980000 perm   11501 sec   (433 perm/sec)   p_kst 2.008032e-07   p_cons 8.908751e-01   p_joint 9.839357e-06

Joint ci ratio: 5.543689e-01	ci left: 7.264632e-06	ci right 1.298206e-05	k: 49	n:4990000
Cons ci ratio: 6.141680e-04	ci left: 8.906023e-01	ci right 8.911496e-01	k: 4445472	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
EMG1   4990000 perm   11546 sec   (432 perm/sec)   p_kst 2.004008e-07   p_cons 8.908762e-01   p_joint 9.819639e-06

Joint ci ratio: 5.543689e-01	ci left: 7.250102e-06	ci right 1.295610e-05	k: 49	n:5000000
Cons ci ratio: 6.135654e-04	ci left: 8.905988e-01	ci right 8.911456e-01	k: 4454362	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
EMG1   5000000 perm   11591 sec   (431 perm/sec)   p_kst 2.000000e-07   p_cons 8.908724e-01   p_joint 9.800000e-06

Outputting figure to mutsig2_images.part000000000056/EMG1.6_758_5000000_2e-07_0.89087_9.8e-06.png
                gene_name: EMG1
               theta_stop: 2.8 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.89 
                  p_joint: 9.80e-06 
     ci_joint_bounds_left: 7.25e-06 
    ci_joint_bounds_right: 1.30e-05 

Current progress: 50 percent done.
ELFN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.479096e-02	ci left: 2.073764e-01	ci right 2.235897e-01	k: 2154	n:10000
Cons ci ratio: 3.647465e-02	ci left: 5.260662e-01	ci right 5.457129e-01	k: 5359	n:10000
KS ci ratio: 2.794182e-01	ci left: 1.660112e-02	ci right 2.208394e-02	k: 192	n:10000
ELFN2   10000 perm   2 sec   (6055 perm/sec)   p_kst 1.920000e-02   p_cons 5.359000e-01   p_joint 2.154000e-01

Joint ci ratio: 4.954244e-02	ci left: 2.324584e-01	ci right 2.443178e-01	k: 4767	n:20000
Cons ci ratio: 2.607975e-02	ci left: 5.234543e-01	ci right 5.373369e-01	k: 10608	n:20000
KS ci ratio: 1.947721e-01	ci left: 1.791431e-02	ci right 2.182703e-02	k: 396	n:20000
ELFN2   20000 perm   4 sec   (5356 perm/sec)   p_kst 1.980000e-02   p_cons 5.304000e-01   p_joint 2.383500e-01

Joint ci ratio: 4.301167e-02	ci left: 2.121481e-01	ci right 2.215068e-01	k: 6504	n:30000
Cons ci ratio: 2.115387e-02	ci left: 5.280352e-01	ci right 5.393582e-01	k: 16011	n:30000
KS ci ratio: 1.614696e-01	ci left: 1.770919e-02	ci right 2.085155e-02	k: 577	n:30000
ELFN2   30000 perm   6 sec   (5064 perm/sec)   p_kst 1.923333e-02   p_cons 5.337000e-01   p_joint 2.168000e-01

Joint ci ratio: 3.347273e-02	ci left: 2.510324e-01	ci right 2.596032e-01	k: 10212	n:40000
Cons ci ratio: 1.774173e-02	ci left: 5.447333e-01	ci right 5.545095e-01	k: 21985	n:40000
KS ci ratio: 1.395299e-01	ci left: 1.799839e-02	ci right 2.072202e-02	k: 773	n:40000
ELFN2   40000 perm   8 sec   (4866 perm/sec)   p_kst 1.932500e-02   p_cons 5.496250e-01   p_joint 2.553000e-01

Joint ci ratio: 3.172508e-02	ci left: 2.301951e-01	ci right 2.376358e-01	k: 11695	n:50000
Cons ci ratio: 1.585869e-02	ci left: 5.455665e-01	ci right 5.543077e-01	k: 27497	n:50000
KS ci ratio: 1.235361e-01	ci left: 1.851926e-02	ci right 2.097695e-02	k: 986	n:50000
ELFN2   50000 perm   11 sec   (4724 perm/sec)   p_kst 1.972000e-02   p_cons 5.499400e-01   p_joint 2.339000e-01

Joint ci ratio: 2.972355e-02	ci left: 2.213819e-01	ci right 2.280781e-01	k: 13483	n:60000
Cons ci ratio: 1.446550e-02	ci left: 5.463422e-01	ci right 5.543196e-01	k: 33020	n:60000
KS ci ratio: 1.121178e-01	ci left: 1.884609e-02	ci right 2.110068e-02	k: 1197	n:60000
ELFN2   60000 perm   13 sec   (4610 perm/sec)   p_kst 1.995000e-02   p_cons 5.503333e-01   p_joint 2.247167e-01

Joint ci ratio: 2.568879e-02	ci left: 2.463973e-01	ci right 2.528235e-01	k: 17472	n:70000
Cons ci ratio: 1.339533e-02	ci left: 5.465342e-01	ci right 5.539188e-01	k: 38516	n:70000
KS ci ratio: 1.039022e-01	ci left: 1.889214e-02	ci right 2.097649e-02	k: 1394	n:70000
ELFN2   70000 perm   16 sec   (4506 perm/sec)   p_kst 1.991429e-02   p_cons 5.502286e-01   p_joint 2.496000e-01

Joint ci ratio: 2.209545e-02	ci left: 2.792200e-01	ci right 2.854708e-01	k: 22587	n:80000
Cons ci ratio: 1.252239e-02	ci left: 5.470825e-01	ci right 5.539889e-01	k: 44043	n:80000
KS ci ratio: 9.741908e-02	ci left: 1.887023e-02	ci right 2.081481e-02	k: 1586	n:80000
ELFN2   80000 perm   18 sec   (4409 perm/sec)   p_kst 1.982500e-02   p_cons 5.505375e-01   p_joint 2.823375e-01

Outputting figure to mutsig2_images.part000000000056/ELFN2.2_2467_80000_0.019825_0.55054_0.28234.png
                gene_name: ELFN2
               theta_stop: 0.097 
                    nperm: 80000 
                     p_ks: 0.020 
        ci_ks_bounds_left: 0.019 
       ci_ks_bounds_right: 0.021 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.55 
                  p_joint: 0.28 
     ci_joint_bounds_left: 0.28 
    ci_joint_bounds_right: 0.29 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000056
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 56 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1545>
Subject: Job 8704191: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1545>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000057> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:36:25 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000057.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000057.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 57  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000057.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    257.46 sec.
    Max Memory :      5909 MB
    Max Swap   :      8423 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
57
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 57
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 57: processing genes 5067 - 5157
Calculating significance of each gene.
Using projection method.
5067	ENO1	1
5068	ENO2	1
5069	ENO3	1
5070	ENOPH1	1
5071	ENOSF1	1
5072	ENOX1	1
5073	ENOX2	2.498137e-01
5074	ENPEP	2.930388e-03
5075	ENPP1	2.497513e-02
5076	ENPP2	9.607672e-03
5077	ENPP3	1
5078	ENPP4	1
5079	ENPP5	1
5080	ENPP6	1.105712e-01
5081	ENPP7	1
5082	ENSA	1
5083	ENTHD1	1
5084	ENTPD1	1
5085	ENTPD2	1
5086	ENTPD3	1
5087	ENTPD4	1
5088	ENTPD5	1
5089	ENTPD6	1
5090	ENTPD7	1
5091	ENTPD8	1
5092	ENY2	1
5093	EOMES	1
5094	EP300	1
5095	EP400	5.720754e-01
5096	EPAS1	1
5097	EPB41	1
5098	EPB41L1	1.859082e-01
5099	EPB41L2	1
5100	EPB41L3	2.383257e-01
5101	EPB41L4A	1
5102	EPB41L4B	1
5103	EPB41L5	1
5104	EPB42	1
5105	EPB49	1.863722e-01
5106	EPC1	1
5107	EPC2	1
5108	EPCAM	4.121916e-02
5109	EPDR1	1
5110	EPGN	1
5111	EPHA1	1
5112	EPHA10	1
5113	EPHA2	1
5114	EPHA3	1
5115	EPHA4	1
5116	EPHA5	1
5117	EPHA6	7.723858e-02
5118	EPHA7	1
5119	EPHA8	1
5120	EPHB1	7.795205e-02
5121	EPHB2	1
5122	EPHB3	1
5123	EPHB4	1
5124	EPHB6	1
5125	EPHX1	1
5126	EPHX2	1
5127	EPHX3	1
5128	EPHX4	1
5129	EPM2A	1
5130	EPM2AIP1	1
5131	EPN1	1
5132	EPN2	1
5133	EPN3	1
5134	EPO	1
5135	EPOR	1.677735e-01
5136	EPPK1	1
5137	EPRS	1.143060e-01
5138	EPS15	1
5139	EPS15L1	3.452376e-01
5140	EPS8	1
5141	EPS8L1	1.696094e-01
5142	EPS8L2	1
5143	EPS8L3	1
5144	EPSTI1	1
5145	EPT1	1
5146	EPX	1.851826e-01
5147	EPYC	1
5148	ERAL1	1
5149	ERAP1	1
5150	ERAP2	1
5151	ERAS	1
5152	ERBB2	2.891249e-01
5153	ERBB2IP	1
5154	ERBB3	4.104769e-01
5155	ERBB4	1
5156	ERC1	3.493666e-01
5157	ERC2	3.089177e-01
Done

Running MutSig 2:
Scatter job 57: processing genes 5067 - 5157
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ENPEP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.969375e-02	ci left: 2.922170e-01	ci right 3.102989e-01	k: 3012	n:10000
Cons ci ratio: 4.448599e-02	ci left: 4.272478e-01	ci right 4.467889e-01	k: 4370	n:10000
KS ci ratio: 8.546557e-02	ci left: 1.663205e-01	ci right 1.812701e-01	k: 1737	n:10000
ENPEP   10000 perm   2 sec   (4460 perm/sec)   p_kst 1.737000e-01   p_cons 4.370000e-01   p_joint 3.012000e-01

Outputting figure to mutsig2_images.part000000000057/ENPEP.3_2954_10000_0.1737_0.437_0.3012.png
                gene_name: ENPEP
               theta_stop: 0.085 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.31 

Current progress: 14 percent done.
ENPP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 8.761311e-03	ci left: 9.481473e-01	ci right 9.565866e-01	k: 9525	n:10000
KS ci ratio: 3.758145e-02	ci left: 5.111539e-01	ci right 5.308339e-01	k: 5210	n:10000
ENPP2   10000 perm   2 sec   (5312 perm/sec)   p_kst 5.210000e-01   p_cons 9.525000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000057/ENPP2.3_2931_10000_0.521_0.9525_1.png
                gene_name: ENPP2
               theta_stop: 0.038 
                    nperm: 10000 
                     p_ks: 0.52 
        ci_ks_bounds_left: 0.51 
       ci_ks_bounds_right: 0.53 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.95 
     ci_cons_bounds_right: 0.96 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 29 percent done.
ENPP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.281968e-01	ci left: 7.999369e-02	ci right 9.104916e-02	k: 854	n:10000
Cons ci ratio: 4.677321e-02	ci left: 4.028281e-01	ci right 4.222229e-01	k: 4125	n:10000
KS ci ratio: 1.974952e-01	ci left: 3.414726e-02	ci right 4.172496e-02	k: 378	n:10000
ENPP1   10000 perm   2 sec   (5620 perm/sec)   p_kst 3.780000e-02   p_cons 4.125000e-01   p_joint 8.540000e-02

Joint ci ratio: 7.844266e-02	ci left: 1.066291e-01	ci right 1.153844e-01	k: 2219	n:20000
Cons ci ratio: 3.277832e-02	ci left: 4.100544e-01	ci right 4.237698e-01	k: 8338	n:20000
KS ci ratio: 1.385177e-01	ci left: 3.582747e-02	ci right 4.120776e-02	k: 769	n:20000
ENPP1   20000 perm   4 sec   (4856 perm/sec)   p_kst 3.845000e-02   p_cons 4.169000e-01   p_joint 1.109500e-01

Joint ci ratio: 5.528400e-02	ci left: 1.395509e-01	ci right 1.475183e-01	k: 4305	n:30000
Cons ci ratio: 2.676788e-02	ci left: 4.112458e-01	ci right 4.224369e-01	k: 12505	n:30000
KS ci ratio: 1.132021e-01	ci left: 3.625368e-02	ci right 4.063629e-02	k: 1152	n:30000
ENPP1   30000 perm   7 sec   (4603 perm/sec)   p_kst 3.840000e-02   p_cons 4.168333e-01   p_joint 1.435000e-01

Joint ci ratio: 5.636434e-02	ci left: 1.048262e-01	ci right 1.109308e-01	k: 4314	n:40000
Cons ci ratio: 2.319553e-02	ci left: 4.117125e-01	ci right 4.213996e-01	k: 16662	n:40000
KS ci ratio: 9.798104e-02	ci left: 3.658676e-02	ci right 4.038062e-02	k: 1538	n:40000
ENPP1   40000 perm   9 sec   (4390 perm/sec)   p_kst 3.845000e-02   p_cons 4.165500e-01   p_joint 1.078500e-01

Outputting figure to mutsig2_images.part000000000057/ENPP1.2_2878_40000_0.03845_0.41655_0.10785.png
                gene_name: ENPP1
               theta_stop: 0.098 
                    nperm: 40000 
                     p_ks: 0.038 
        ci_ks_bounds_left: 0.037 
       ci_ks_bounds_right: 0.040 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.42 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.10 
    ci_joint_bounds_right: 0.11 

Current progress: 43 percent done.
EPHA6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.521376e-02	ci left: 2.055028e-01	ci right 2.216644e-01	k: 2135	n:10000
KS ci ratio: 3.344976e-02	ci left: 5.688503e-01	ci right 5.883039e-01	k: 5786	n:10000
EPHA6   10000 perm   2 sec   (5087 perm/sec)   p_kst 5.786000e-01   p_cons 2.135000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000057/EPHA6.2_3582_10000_0.5786_0.2135_1.png
                gene_name: EPHA6
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.58 
        ci_ks_bounds_left: 0.57 
       ci_ks_bounds_right: 0.59 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 57 percent done.
EPHB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.788665e-02	ci left: 3.052063e-01	ci right 3.235020e-01	k: 3143	n:10000
KS ci ratio: 1.236972e-02	ci left: 9.037070e-01	ci right 9.150532e-01	k: 9095	n:10000
EPHB1   10000 perm   2 sec   (5603 perm/sec)   p_kst 9.095000e-01   p_cons 3.143000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000057/EPHB1.2_3019_10000_0.9095_0.3143_1.png
                gene_name: EPHB1
               theta_stop: 0.058 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.90 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.32 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 71 percent done.
EPPK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.423637e-02	ci left: 1.704491e-01	ci right 1.855389e-01	k: 1779	n:10000
Cons ci ratio: 9.045589e-02	ci left: 1.509016e-01	ci right 1.652982e-01	k: 1580	n:10000
KS ci ratio: 6.471812e-02	ci left: 2.596344e-01	ci right 2.771008e-01	k: 2683	n:10000
EPPK1   10000 perm   3 sec   (3867 perm/sec)   p_kst 2.683000e-01   p_cons 1.580000e-01   p_joint 1.779000e-01

Outputting figure to mutsig2_images.part000000000057/EPPK1.2_7267_10000_0.2683_0.158_0.1779.png
                gene_name: EPPK1
               theta_stop: 0.090 
                    nperm: 10000 
                     p_ks: 0.27 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.28 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.17 
    ci_joint_bounds_right: 0.19 

Current progress: 86 percent done.
EPRS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 8.475817e-02	ci left: 1.686795e-01	ci right 1.837096e-01	k: 1761	n:10000
KS ci ratio: 1.506850e-02	ci left: 8.645785e-01	ci right 8.778045e-01	k: 8713	n:10000
EPRS   10000 perm   2 sec   (4683 perm/sec)   p_kst 8.713000e-01   p_cons 1.761000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000057/EPRS.2_4667_10000_0.8713_0.1761_1.png
                gene_name: EPRS
               theta_stop: 0.085 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.86 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.17 
     ci_cons_bounds_right: 0.18 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000057
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 57 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1528>
Subject: Job 8704192: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1528>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000058> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:36:05 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000058.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000058.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 58  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000058.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    226.91 sec.
    Max Memory :      5567 MB
    Max Swap   :      8330 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
58
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 58
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 58: processing genes 5158 - 5247
Calculating significance of each gene.
Using projection method.
5158	ERCC1	1
5159	ERCC2	1
5160	ERCC3	3.377953e-01
5161	ERCC4	1
5162	ERCC5	1
5163	ERCC6	3.504520e-01
5164	ERCC6L	1
5165	ERCC8	1
5166	EREG	1
5167	ERF	1.235493e-01
5168	ERG	3.244501e-02
5169	ERGIC1	1
5170	ERGIC2	6.678029e-02
5171	ERGIC3	1
5172	ERH	1
5173	ERI1	1
5174	ERI2	1
5175	ERI3	1
5176	ERICH1	1
5177	ERLEC1	2.183813e-01
5178	ERLIN1	1
5179	ERLIN2	1
5180	ERMAP	1
5181	ERMN	1
5182	ERMP1	2.391685e-01
5183	ERN1	1
5184	ERN2	1
5185	ERO1L	1.505926e-01
5186	ERO1LB	1
5187	ERP27	1
5188	ERP29	1
5189	ERP44	1
5190	ERRFI1	1
5191	ERV3	1
5192	ERVFRDE1	1
5193	ESAM	1
5194	ESCO1	1
5195	ESCO2	1.555954e-01
5196	ESD	1
5197	ESF1	1
5198	ESM1	1
5199	ESPL1	2.853995e-01
5200	ESPN	1.038212e-01
5201	ESPNL	1
5202	ESR1	1.125108e-01
5203	ESR2	1
5204	ESRP1	1.062974e-01
5205	ESRP2	1
5206	ESRRA	1
5207	ESRRB	1
5208	ESRRG	1
5209	ESX1	4.161086e-02
5210	ESYT1	1
5211	ESYT2	1
5212	ESYT3	1
5213	ETAA1	1.239995e-01
5214	ETF1	1.969021e-01
5215	ETFA	1
5216	ETFB	1
5217	ETFDH	1
5218	ETHE1	1
5219	ETNK1	1
5220	ETNK2	1
5221	ETS1	2.645272e-02
5222	ETS2	1
5223	ETV1	1.867814e-01
5224	ETV2	1
5225	ETV3	1
5226	ETV3L	1
5227	ETV4	1
5228	ETV5	1.038644e-01
5229	ETV6	1
5230	ETV7	1
5231	EVC	1
5232	EVC2	1
5233	EVI2A	1
5234	EVI2B	1
5235	EVI5	1
5236	EVI5L	1
5237	EVL	1
In gene EVPL the following bins exceed PROBCAP:
    THCA-DJ-A1QN-TP	categ 6	N = 5485    n = 1	mu =   6.87e-08
5238	EVPL	2.532194e-02
5239	EVPLL	1
5240	EVX1	1
5241	EVX2	9.010688e-02
5242	EWSR1	1
5243	EXD1	1
5244	EXD2	1
5245	EXD3	1
5246	EXO1	1
5247	EXOC1	1
Done

Running MutSig 2:
Scatter job 58: processing genes 5158 - 5247
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
EVPL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.356728e-02	ci left: 7.257273e-01	ci right 7.431359e-01	k: 7345	n:10000
Cons ci ratio: 4.582155e-02	ci left: 4.127924e-01	ci right 4.322528e-01	k: 4225	n:10000
KS ci ratio: 4.658079e-02	ci left: 4.048206e-01	ci right 4.242292e-01	k: 4145	n:10000
EVPL   10000 perm   3 sec   (3412 perm/sec)   p_kst 4.145000e-01   p_cons 4.225000e-01   p_joint 7.345000e-01

Outputting figure to mutsig2_images.part000000000058/EVPL.4_6190_10000_0.4145_0.4225_0.7345.png
                gene_name: EVPL
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.73 
     ci_joint_bounds_left: 0.73 
    ci_joint_bounds_right: 0.74 

Current progress: 33 percent done.
ESPL1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.448266e-02	ci left: 5.539127e-01	ci right 5.734502e-01	k: 5637	n:10000
KS ci ratio: 3.476387e-02	ci left: 5.499041e-01	ci right 5.694611e-01	k: 5597	n:10000
ESPL1   10000 perm   2 sec   (4021 perm/sec)   p_kst 5.597000e-01   p_cons 5.637000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000058/ESPL1.2_6483_10000_0.5597_0.5637_1.png
                gene_name: ESPL1
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.56 
        ci_ks_bounds_left: 0.55 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.56 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.57 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
ETS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.392492e-02	ci left: 8.816556e-01	ci right 8.941174e-01	k: 8880	n:10000
Cons ci ratio: 4.417103e-02	ci left: 4.307383e-01	ci right 4.502963e-01	k: 4405	n:10000
KS ci ratio: 1.571990e-02	ci left: 8.545745e-01	ci right 8.682142e-01	k: 8615	n:10000
ETS1   10000 perm   2 sec   (6282 perm/sec)   p_kst 8.615000e-01   p_cons 4.405000e-01   p_joint 8.880000e-01

Outputting figure to mutsig2_images.part000000000058/ETS1.2_1580_10000_0.8615_0.4405_0.888.png
                gene_name: ETS1
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.86 
        ci_ks_bounds_left: 0.85 
       ci_ks_bounds_right: 0.87 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.89 
     ci_joint_bounds_left: 0.88 
    ci_joint_bounds_right: 0.89 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000058
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 58 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1543>
Subject: Job 8704195: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1543>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000059> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:58 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000059.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000059.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 59  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000059.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    234.96 sec.
    Max Memory :      5677 MB
    Max Swap   :      8384 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
59
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 59
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 59: processing genes 5248 - 5337
Calculating significance of each gene.
Using projection method.
5248	EXOC2	1.094321e-01
5249	EXOC3	1
5250	EXOC3L	1
5251	EXOC3L2	2.738171e-02
5252	EXOC4	1
5253	EXOC5	1
5254	EXOC6	1
5255	EXOC6B	1
5256	EXOC7	1
5257	EXOC8	1
5258	EXOG	1
5259	EXOSC1	1
5260	EXOSC10	3.185426e-01
5261	EXOSC2	1
5262	EXOSC3	1.295782e-01
5263	EXOSC4	1
5264	EXOSC5	1
5265	EXOSC7	1
5266	EXOSC8	1
5267	EXOSC9	1
5268	EXPH5	2.777491e-01
5269	EXT1	1
5270	EXT2	1
5271	EXTL1	1
5272	EXTL2	1
5273	EXTL3	1
5274	EYA1	1
5275	EYA2	1
5276	EYA3	1
5277	EYA4	1
5278	EZH1	3.766945e-03
5279	EZH2	1
5280	EZR	2.763681e-01
5281	F10	2.077864e-01
5282	F11	1
5283	F11R	1
5284	F12	1
5285	F13A1	1
5286	F13B	1
5287	F2	1
5288	F2R	1
5289	F2RL1	1
5290	F2RL2	1.103015e-01
5291	F2RL3	1
5292	F3	1
5293	F5	1
5294	F7	1.140513e-01
5295	F8	4.199945e-01
5296	F9	1
5297	FA2H	1.046637e-01
In gene FAAH the following bins exceed PROBCAP:
    THCA-EL-A3GP-TP	categ 6	N = 1544    n = 1	mu =   1.00e-07
5298	FAAH	8.420934e-02
5299	FAAH2	1
5300	FABP1	1
In gene FABP12 the following bins exceed PROBCAP:
    THCA-BJ-A28S-TP	categ 6	N = 226     n = 1	mu =   2.86e-07
5301	FABP12	3.187118e-02
5302	FABP2	1
5303	FABP3	1
5304	FABP4	1
5305	FABP5	1
5306	FABP6	1
5307	FABP7	1
5308	FABP9	1
5309	FADD	1
5310	FADS1	1
5311	FADS2	1
5312	FADS3	1
5313	FADS6	1.266354e-01
5314	FAF1	1
In gene FAF2 the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 1276    n = 1	mu =   1.44e-07
5315	FAF2	1.026360e-01
5316	FAH	1
5317	FAHD1	1
5318	FAHD2A	1
5319	FAHD2B	1
5320	FAIM	1
5321	FAIM2	1.192159e-01
5322	FAIM3	1
5323	FAM100A	1
5324	FAM100B	1
5325	FAM101A	1
5326	FAM101B	1
5327	FAM102A	1
5328	FAM102B	1
5329	FAM103A1	1
5330	FAM104A	1
5331	FAM104B	1
5332	FAM105A	1
5333	FAM105B	1
5334	FAM107A	1
5335	FAM107B	1
5336	FAM108A1	1
5337	FAM108B1	1
Done

Running MutSig 2:
Scatter job 59: processing genes 5248 - 5337
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
EZH1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.342318e-02	ci left: 8.889287e-01	ci right 9.010401e-01	k: 8951	n:10000
KS ci ratio: 1.004086e-02	ci left: 9.336122e-01	ci right 9.431305e-01	k: 9385	n:10000
EZH1   10000 perm   2 sec   (5358 perm/sec)   p_kst 9.385000e-01   p_cons 8.951000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000059/EZH1.3_2320_10000_0.9385_0.8951_1.png
                gene_name: EZH1
               theta_stop: 0.013 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.93 
       ci_ks_bounds_right: 0.94 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000059
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 59 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1709>
Subject: Job 8704197: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1709>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000060> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:33 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000060.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000060.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 60  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000060.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    171.89 sec.
    Max Memory :      5722 MB
    Max Swap   :      8471 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
60
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 60
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 60: processing genes 5338 - 5428
Calculating significance of each gene.
Using projection method.
5338	FAM108C1	1
5339	FAM109A	1
5340	FAM109B	1
5341	FAM110A	1
5342	FAM110B	1.406917e-01
5343	FAM110C	6.158346e-02
5344	FAM111A	1
5345	FAM111B	1
5346	FAM113A	1
5347	FAM113B	1
5348	FAM114A1	1
5349	FAM114A2	1
5350	FAM115A	1
5351	FAM115C	1
5352	FAM116A	1
5353	FAM116B	1
5354	FAM117A	1
5355	FAM117B	1
5356	FAM118A	1
5357	FAM118B	1
5358	FAM119A	1
5359	FAM119B	1
5360	FAM120A	1
5361	FAM120AOS	1
5362	FAM120B	1.076591e-01
5363	FAM120C	7.972392e-02
5364	FAM122A	1
5365	FAM122B	1
5366	FAM122C	1
5367	FAM123A	1
5368	FAM123B	1
5369	FAM123C	1
5370	FAM124A	1
5371	FAM124B	1
5372	FAM125A	1
5373	FAM125B	1
5374	FAM126A	1
5375	FAM126B	1
5376	FAM127A	1
5377	FAM127B	1
5378	FAM127C	1
5379	FAM128A	1
5380	FAM128B	1
5381	FAM129A	2.011702e-01
5382	FAM129B	2.823482e-02
5383	FAM129C	1
5384	FAM131A	1
5385	FAM131B	1
5386	FAM131C	1
5387	FAM132A	1
5388	FAM133A	1
5389	FAM133B	1
5390	FAM134A	1
5391	FAM134B	1
5392	FAM134C	1
5393	FAM135A	1
5394	FAM135B	1.224844e-01
5395	FAM136A	1
5396	FAM136B	5.065158e-02
5397	FAM13A	1.363466e-02
5398	FAM13B	1
5399	FAM13C	1
5400	FAM149A	1
5401	FAM150A	1
5402	FAM150B	1
5403	FAM151A	1
5404	FAM151B	1
5405	FAM153A	7.092519e-02
5406	FAM153B	7.932809e-02
5407	FAM153C	1
5408	FAM154A	1
5409	FAM154B	1
5410	FAM155A	2.719479e-02
5411	FAM155B	1
5412	FAM158A	1
5413	FAM159A	1
5414	FAM160A2	1
5415	FAM160B1	1
In gene FAM160B2 the following bins exceed PROBCAP:
    THCA-EL-A3D4-TP	categ 6	N = 1247    n = 1	mu =   6.97e-08
5416	FAM160B2	5.109332e-02
5417	FAM161A	1.645483e-01
5418	FAM161B	1
5419	FAM162A	1
5420	FAM162B	1
5421	FAM163A	1
5422	FAM164A	1
5423	FAM164C	1
5424	FAM165B	1
5425	FAM166A	1
5426	FAM166B	1
5427	FAM167A	1
5428	FAM167B	1
Done

Running MutSig 2:
Scatter job 60: processing genes 5338 - 5428
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FAM13A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.048275e-02	ci left: 2.867661e-01	ci right 3.047530e-01	k: 2957	n:10000
Cons ci ratio: 1.211965e-01	ci left: 8.893260e-02	ci right 1.005047e-01	k: 946	n:10000
KS ci ratio: 1.438940e-02	ci left: 8.747995e-01	ci right 8.875775e-01	k: 8813	n:10000
FAM13A   10000 perm   2 sec   (5160 perm/sec)   p_kst 8.813000e-01   p_cons 9.460000e-02   p_joint 2.957000e-01

Joint ci ratio: 4.281932e-02	ci left: 2.889333e-01	ci right 3.016263e-01	k: 5905	n:20000
Cons ci ratio: 8.760394e-02	ci left: 8.699967e-02	ci right 9.501970e-02	k: 1819	n:20000
KS ci ratio: 1.022715e-02	ci left: 8.756192e-01	ci right 8.846699e-01	k: 17604	n:20000
FAM13A   20000 perm   9 sec   (2149 perm/sec)   p_kst 8.802000e-01   p_cons 9.095000e-02   p_joint 2.952500e-01

Outputting figure to mutsig2_images.part000000000060/FAM13A.3_3201_20000_0.8802_0.09095_0.29525.png
                gene_name: FAM13A
               theta_stop: 0.088 
                    nperm: 20000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.091 
      ci_cons_bounds_left: 0.087 
     ci_cons_bounds_right: 0.095 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.30 

Current progress: 20 percent done.
FAM120C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.170407e-02	ci left: 5.948373e-01	ci right 6.141018e-01	k: 6045	n:10000
Cons ci ratio: 2.790793e-02	ci left: 6.542430e-01	ci right 6.728616e-01	k: 6636	n:10000
KS ci ratio: 9.035409e-02	ci left: 1.511960e-01	ci right 1.656036e-01	k: 1583	n:10000
FAM120C   10000 perm   2 sec   (5529 perm/sec)   p_kst 1.583000e-01   p_cons 6.636000e-01   p_joint 6.045000e-01

Outputting figure to mutsig2_images.part000000000060/FAM120C.2_3377_10000_0.1583_0.6636_0.6045.png
                gene_name: FAM120C
               theta_stop: 0.090 
                    nperm: 10000 
                     p_ks: 0.16 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.17 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.65 
     ci_cons_bounds_right: 0.67 
                  p_joint: 0.60 
     ci_joint_bounds_left: 0.59 
    ci_joint_bounds_right: 0.61 

Current progress: 40 percent done.
FAM129B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.186340e-02	ci left: 5.924281e-01	ci right 6.117124e-01	k: 6021	n:10000
Cons ci ratio: 5.046744e-02	ci left: 3.666925e-01	ci right 3.857796e-01	k: 3762	n:10000
KS ci ratio: 5.870215e-02	ci left: 2.992559e-01	ci right 3.174558e-01	k: 3083	n:10000
FAM129B   10000 perm   2 sec   (5938 perm/sec)   p_kst 3.083000e-01   p_cons 3.762000e-01   p_joint 6.021000e-01

Outputting figure to mutsig2_images.part000000000060/FAM129B.2_2317_10000_0.3083_0.3762_0.6021.png
                gene_name: FAM129B
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.38 
      ci_cons_bounds_left: 0.37 
     ci_cons_bounds_right: 0.39 
                  p_joint: 0.60 
     ci_joint_bounds_left: 0.59 
    ci_joint_bounds_right: 0.61 

Current progress: 60 percent done.
FAM135B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.125468e-03	ci left: 9.644665e-01	ci right 9.714574e-01	k: 9681	n:10000
Cons ci ratio: 7.113958e-03	ci left: 9.645717e-01	ci right 9.715522e-01	k: 9682	n:10000
KS ci ratio: 7.116072e-02	ci left: 2.244469e-01	ci right 2.411090e-01	k: 2327	n:10000
FAM135B   10000 perm   2 sec   (5313 perm/sec)   p_kst 2.327000e-01   p_cons 9.682000e-01   p_joint 9.681000e-01

Outputting figure to mutsig2_images.part000000000060/FAM135B.2_4297_10000_0.2327_0.9682_0.9681.png
                gene_name: FAM135B
               theta_stop: 0.071 
                    nperm: 10000 
                     p_ks: 0.23 
        ci_ks_bounds_left: 0.22 
       ci_ks_bounds_right: 0.24 
                   p_cons: 0.97 
      ci_cons_bounds_left: 0.96 
     ci_cons_bounds_right: 0.97 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.96 
    ci_joint_bounds_right: 0.97 

Current progress: 80 percent done.
FAM155A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.688720e-02	ci left: 5.204606e-01	ci right 5.401218e-01	k: 5303	n:10000
KS ci ratio: 1.275626e-02	ci left: 8.983659e-01	ci right 9.099975e-01	k: 9043	n:10000
FAM155A   10000 perm   1 sec   (6735 perm/sec)   p_kst 9.043000e-01   p_cons 5.303000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000060/FAM155A.2_1389_10000_0.9043_0.5303_1.png
                gene_name: FAM155A
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.90 
        ci_ks_bounds_left: 0.90 
       ci_ks_bounds_right: 0.91 
                   p_cons: 0.53 
      ci_cons_bounds_left: 0.52 
     ci_cons_bounds_right: 0.54 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000060
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 60 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1655>
Subject: Job 8704198: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1655>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000061> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:36:28 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000061.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000061.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 61  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000061.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    259.23 sec.
    Max Memory :      6084 MB
    Max Swap   :      8892 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
61
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 61
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 61: processing genes 5429 - 5518
Calculating significance of each gene.
Using projection method.
5429	FAM168A	1
5430	FAM168B	1
5431	FAM169A	1
5432	FAM169B	7.789305e-02
5433	FAM170A	1
5434	FAM171A1	1
5435	FAM171B	1
5436	FAM172A	1
5437	FAM173A	1
5438	FAM173B	1
5439	FAM174A	1
5440	FAM174B	1
5441	FAM175A	1
5442	FAM175B	1
5443	FAM176A	1
5444	FAM176B	1
5445	FAM177A1	1
5446	FAM177B	1
5447	FAM178A	1
5448	FAM179A	5.322115e-02
5449	FAM179B	1.807629e-01
5450	FAM180A	1
5451	FAM181A	1
5452	FAM181B	1
5453	FAM183A	1
5454	FAM184A	1
5455	FAM186B	1
5456	FAM187B	8.534504e-02
5457	FAM188A	1
5458	FAM188B	1
5459	FAM189A2	1
5460	FAM189B	1
5461	FAM18A	1
5462	FAM18B	1
5463	FAM18B2	1
5464	FAM190A	1
5465	FAM190B	1
5466	FAM192A	6.126695e-02
5467	FAM193A	1
5468	FAM193B	1
5469	FAM194A	1
5470	FAM195A	1
5471	FAM196A	1.565886e-01
5472	FAM198B	1
5473	FAM199X	1
5474	FAM19A1	1
5475	FAM19A2	1
5476	FAM19A3	1
5477	FAM19A4	1
5478	FAM19A5	1
5479	FAM20A	1
5480	FAM20B	1
5481	FAM21A	1
5482	FAM21B	1
5483	FAM21C	1
5484	FAM22D	1
In gene FAM22F the following bins exceed PROBCAP:
    THCA-FY-A3I4-TP	categ 5	N = 1261    n = 1	mu =   1.36e-07
    THCA-DJ-A2Q6-TP	categ 6	N = 1492    n = 1	mu =   1.02e-07
5485	FAM22F	8.190028e-03
5486	FAM22G	1
5487	FAM24A	1
5488	FAM24B	1
5489	FAM26D	1
5490	FAM26E	1
5491	FAM26F	1
5492	FAM32A	1
5493	FAM35A	3.683140e-02
5494	FAM36A	1
5495	FAM3A	1
5496	FAM3B	1
5497	FAM3C	1
5498	FAM3D	1
5499	FAM40A	1
5500	FAM40B	1
5501	FAM43A	1
5502	FAM43B	1
5503	FAM45A	1
5504	FAM46A	1
5505	FAM46B	1
5506	FAM46C	1
5507	FAM46D	1
5508	FAM47A	2.489955e-02
5509	FAM47B	1
5510	FAM47C	1
5511	FAM48A	1
5512	FAM48B1	1
5513	FAM48B2	1
5514	FAM49A	1
5515	FAM49B	1
5516	FAM50A	1
5517	FAM50B	1.749250e-01
5518	FAM53A	1
Done

Running MutSig 2:
Scatter job 61: processing genes 5429 - 5518
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FAM47C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.153030e-01	ci left: 9.759583e-02	ci right 1.096362e-01	k: 1035	n:10000
Cons ci ratio: 3.487684e-02	ci left: 5.483008e-01	ci right 5.678653e-01	k: 5581	n:10000
KS ci ratio: 2.428074e-01	ci left: 2.231105e-02	ci right 2.856957e-02	k: 253	n:10000
FAM47C   10000 perm   2 sec   (5260 perm/sec)   p_kst 2.530000e-02   p_cons 5.581000e-01   p_joint 1.035000e-01

Joint ci ratio: 1.103482e-01	ci left: 5.606595e-02	ci right 6.266288e-02	k: 1186	n:20000
Cons ci ratio: 2.489906e-02	ci left: 5.464778e-01	ci right 5.603067e-01	k: 11068	n:20000
KS ci ratio: 1.802519e-01	ci left: 2.101484e-02	ci right 2.522538e-02	k: 461	n:20000
FAM47C   20000 perm   7 sec   (2847 perm/sec)   p_kst 2.305000e-02   p_cons 5.534000e-01   p_joint 5.930000e-02

Joint ci ratio: 9.330341e-02	ci left: 5.296827e-02	ci right 5.818489e-02	k: 1666	n:30000
Cons ci ratio: 1.948987e-02	ci left: 5.685477e-01	ci right 5.797713e-01	k: 17225	n:30000
KS ci ratio: 1.486093e-01	ci left: 2.097999e-02	ci right 2.437998e-02	k: 679	n:30000
FAM47C   30000 perm   9 sec   (3213 perm/sec)   p_kst 2.263333e-02   p_cons 5.741667e-01   p_joint 5.553333e-02

Joint ci ratio: 8.669564e-02	ci left: 4.651307e-02	ci right 5.075276e-02	k: 1944	n:40000
Cons ci ratio: 1.687343e-02	ci left: 5.694618e-01	ci right 5.791774e-01	k: 22973	n:40000
KS ci ratio: 1.296295e-01	ci left: 2.089945e-02	ci right 2.382047e-02	k: 893	n:40000
FAM47C   40000 perm   12 sec   (3411 perm/sec)   p_kst 2.232500e-02   p_cons 5.743250e-01   p_joint 4.860000e-02

Joint ci ratio: 7.289075e-02	ci left: 5.268343e-02	ci right 5.668847e-02	k: 2733	n:50000
Cons ci ratio: 1.573096e-02	ci left: 5.495699e-01	ci right 5.583038e-01	k: 27697	n:50000
KS ci ratio: 1.150784e-01	ci left: 2.137335e-02	ci right 2.400247e-02	k: 1133	n:50000
FAM47C   50000 perm   14 sec   (3523 perm/sec)   p_kst 2.266000e-02   p_cons 5.539400e-01   p_joint 5.466000e-02

Joint ci ratio: 6.760145e-02	ci left: 5.126991e-02	ci right 5.487347e-02	k: 3183	n:60000
Cons ci ratio: 1.376573e-02	ci left: 5.707656e-01	ci right 5.786938e-01	k: 34484	n:60000
KS ci ratio: 1.040317e-01	ci left: 2.191278e-02	ci right 2.433365e-02	k: 1386	n:60000
FAM47C   60000 perm   17 sec   (3584 perm/sec)   p_kst 2.310000e-02   p_cons 5.747333e-01   p_joint 5.305000e-02

Joint ci ratio: 6.675887e-02	ci left: 4.537355e-02	ci right 4.852128e-02	k: 3285	n:70000
Cons ci ratio: 1.273991e-02	ci left: 5.712419e-01	ci right 5.785804e-01	k: 40244	n:70000
KS ci ratio: 9.613752e-02	ci left: 2.208352e-02	ci right 2.432767e-02	k: 1623	n:70000
FAM47C   70000 perm   20 sec   (3554 perm/sec)   p_kst 2.318571e-02   p_cons 5.749143e-01   p_joint 4.692857e-02

Outputting figure to mutsig2_images.part000000000061/FAM47C.5_3112_70000_0.023186_0.57491_0.046929.png
                gene_name: FAM47C
               theta_stop: 0.096 
                    nperm: 70000 
                     p_ks: 0.023 
        ci_ks_bounds_left: 0.022 
       ci_ks_bounds_right: 0.024 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.047 
     ci_joint_bounds_left: 0.045 
    ci_joint_bounds_right: 0.049 

Current progress: 17 percent done.
FAM179A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.255073e-02	ci left: 1.450154e-01	ci right 1.591879e-01	k: 1520	n:10000
Cons ci ratio: 2.019685e-01	ci left: 3.262466e-02	ci right 4.004861e-02	k: 362	n:10000
KS ci ratio: 1.113507e-02	ci left: 9.200754e-01	ci right 9.304753e-01	k: 9254	n:10000
FAM179A   10000 perm   2 sec   (5653 perm/sec)   p_kst 9.254000e-01   p_cons 3.620000e-02   p_joint 1.520000e-01

Joint ci ratio: 8.824551e-02	ci left: 8.582360e-02	ci right 9.379612e-02	k: 1795	n:20000
Cons ci ratio: 1.389877e-01	ci left: 3.558584e-02	ci right 4.094947e-02	k: 764	n:20000
KS ci ratio: 7.925852e-03	ci left: 9.207003e-01	ci right 9.280757e-01	k: 18489	n:20000
FAM179A   20000 perm   4 sec   (5036 perm/sec)   p_kst 9.244500e-01   p_cons 3.820000e-02   p_joint 8.975000e-02

Joint ci ratio: 9.084778e-02	ci left: 5.577265e-02	ci right 6.111327e-02	k: 1752	n:30000
Cons ci ratio: 1.142364e-01	ci left: 3.560529e-02	ci right 3.995148e-02	k: 1132	n:30000
KS ci ratio: 6.397326e-03	ci left: 9.230137e-01	ci right 9.289702e-01	k: 27781	n:30000
FAM179A   30000 perm   6 sec   (4814 perm/sec)   p_kst 9.260333e-01   p_cons 3.773333e-02   p_joint 5.840000e-02

Joint ci ratio: 8.767129e-02	ci left: 4.550936e-02	ci right 4.970662e-02	k: 1903	n:40000
Cons ci ratio: 9.919391e-02	ci left: 3.570814e-02	ci right 3.945938e-02	k: 1502	n:40000
KS ci ratio: 5.535311e-03	ci left: 9.235435e-01	ci right 9.286944e-01	k: 37046	n:40000
FAM179A   40000 perm   9 sec   (4668 perm/sec)   p_kst 9.261500e-01   p_cons 3.755000e-02   p_joint 4.757500e-02

Outputting figure to mutsig2_images.part000000000061/FAM179A.2_3136_40000_0.92615_0.03755_0.047575.png
                gene_name: FAM179A
               theta_stop: 0.099 
                    nperm: 40000 
                     p_ks: 0.93 
        ci_ks_bounds_left: 0.92 
       ci_ks_bounds_right: 0.93 
                   p_cons: 0.038 
      ci_cons_bounds_left: 0.036 
     ci_cons_bounds_right: 0.039 
                  p_joint: 0.048 
     ci_joint_bounds_left: 0.046 
    ci_joint_bounds_right: 0.050 

Current progress: 33 percent done.
FAM179B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.590890e-02	ci left: 2.526106e-01	ci right 2.699286e-01	k: 2612	n:10000
Cons ci ratio: 1.533912e-01	ci left: 5.658036e-02	ci right 6.607718e-02	k: 612	n:10000
KS ci ratio: 1.344460e-02	ci left: 8.886212e-01	ci right 9.007478e-01	k: 8948	n:10000
FAM179B   10000 perm   2 sec   (4944 perm/sec)   p_kst 8.948000e-01   p_cons 6.120000e-02   p_joint 2.612000e-01

Joint ci ratio: 7.618347e-02	ci left: 1.124288e-01	ci right 1.213829e-01	k: 2337	n:20000
Cons ci ratio: 1.103482e-01	ci left: 5.606595e-02	ci right 6.266288e-02	k: 1186	n:20000
KS ci ratio: 9.550847e-03	ci left: 8.895495e-01	ci right 8.981356e-01	k: 17878	n:20000
FAM179B   20000 perm   5 sec   (4204 perm/sec)   p_kst 8.939000e-01   p_cons 5.930000e-02   p_joint 1.168500e-01

Joint ci ratio: 5.190770e-02	ci left: 1.555711e-01	ci right 1.638949e-01	k: 4791	n:30000
Cons ci ratio: 8.843500e-02	ci left: 5.874203e-02	ci right 6.420994e-02	k: 1843	n:30000
KS ci ratio: 7.782812e-03	ci left: 8.907322e-01	ci right 8.977246e-01	k: 26828	n:30000
FAM179B   30000 perm   7 sec   (4107 perm/sec)   p_kst 8.942667e-01   p_cons 6.143333e-02   p_joint 1.597000e-01

Outputting figure to mutsig2_images.part000000000061/FAM179B.2_5239_30000_0.89427_0.061433_0.1597.png
                gene_name: FAM179B
               theta_stop: 0.088 
                    nperm: 30000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.89 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.061 
      ci_cons_bounds_left: 0.059 
     ci_cons_bounds_right: 0.064 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.16 

Current progress: 50 percent done.
FAM22F
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.781130e-02	ci left: 8.213734e-01	ci right 8.362346e-01	k: 8289	n:10000
KS ci ratio: 5.654465e-02	ci left: 3.153259e-01	ci right 3.337764e-01	k: 3245	n:10000
FAM22F   10000 perm   2 sec   (6022 perm/sec)   p_kst 3.245000e-01   p_cons 8.289000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000061/FAM22F.2_2299_10000_0.3245_0.8289_1.png
                gene_name: FAM22F
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.84 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
FAM35A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.288106e-02	ci left: 8.966209e-01	ci right 9.083435e-01	k: 9026	n:10000
KS ci ratio: 6.404922e-02	ci left: 2.636916e-01	ci right 2.812411e-01	k: 2724	n:10000
FAM35A   10000 perm   2 sec   (5914 perm/sec)   p_kst 2.724000e-01   p_cons 9.026000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000061/FAM35A.2_2536_10000_0.2724_0.9026_1.png
                gene_name: FAM35A
               theta_stop: 0.064 
                    nperm: 10000 
                     p_ks: 0.27 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.28 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.90 
     ci_cons_bounds_right: 0.91 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
FAM47A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.977666e-01	ci left: 3.405205e-02	ci right 4.162024e-02	k: 377	n:10000
Cons ci ratio: 5.379860e-02	ci left: 3.373679e-01	ci right 3.561214e-01	k: 3467	n:10000
KS ci ratio: 4.310919e-01	ci left: 6.437624e-03	ci right 1.005764e-02	k: 81	n:10000
FAM47A   10000 perm   2 sec   (5973 perm/sec)   p_kst 8.100000e-03   p_cons 3.467000e-01   p_joint 3.770000e-02

Joint ci ratio: 5.872384e-02	ci left: 1.768223e-01	ci right 1.875702e-01	k: 3643	n:20000
Cons ci ratio: 3.510739e-02	ci left: 3.772020e-01	ci right 3.907318e-01	k: 7679	n:20000
KS ci ratio: 2.793383e-01	ci left: 8.388326e-03	ci right 1.115700e-02	k: 194	n:20000
FAM47A   20000 perm   4 sec   (5303 perm/sec)   p_kst 9.700000e-03   p_cons 3.839500e-01   p_joint 1.821500e-01

Joint ci ratio: 5.190770e-02	ci left: 1.555711e-01	ci right 1.638949e-01	k: 4791	n:30000
Cons ci ratio: 2.872771e-02	ci left: 3.774276e-01	ci right 3.884618e-01	k: 11488	n:30000
KS ci ratio: 2.361634e-01	ci left: 8.025163e-03	ci right 1.020483e-02	k: 272	n:30000
FAM47A   30000 perm   6 sec   (5070 perm/sec)   p_kst 9.066667e-03   p_cons 3.829333e-01   p_joint 1.597000e-01

Joint ci ratio: 4.620932e-02	ci left: 1.489402e-01	ci right 1.560103e-01	k: 6098	n:40000
Cons ci ratio: 2.487057e-02	ci left: 3.783320e-01	ci right 3.878850e-01	k: 15324	n:40000
KS ci ratio: 2.009341e-01	ci left: 8.477597e-03	ci right 1.039463e-02	k: 376	n:40000
FAM47A   40000 perm   8 sec   (4914 perm/sec)   p_kst 9.400000e-03   p_cons 3.831000e-01   p_joint 1.524500e-01

Joint ci ratio: 2.844447e-02	ci left: 2.713482e-01	ci right 2.791979e-01	k: 13763	n:50000
Cons ci ratio: 2.221129e-02	ci left: 3.795542e-01	ci right 3.880993e-01	k: 19191	n:50000
KS ci ratio: 1.790038e-01	ci left: 8.649199e-03	ci right 1.036847e-02	k: 474	n:50000
FAM47A   50000 perm   10 sec   (4788 perm/sec)   p_kst 9.480000e-03   p_cons 3.838200e-01   p_joint 2.752600e-01

Joint ci ratio: 2.572404e-02	ci left: 2.754303e-01	ci right 2.826244e-01	k: 16741	n:60000
Cons ci ratio: 2.029276e-02	ci left: 3.795402e-01	ci right 3.873377e-01	k: 23006	n:60000
KS ci ratio: 1.631190e-01	ci left: 8.755277e-03	ci right 1.032605e-02	k: 571	n:60000
FAM47A   60000 perm   13 sec   (4680 perm/sec)   p_kst 9.516667e-03   p_cons 3.834333e-01   p_joint 2.790167e-01

Joint ci ratio: 2.390948e-02	ci left: 2.741282e-01	ci right 2.807760e-01	k: 19421	n:70000
Cons ci ratio: 1.883037e-02	ci left: 3.787549e-01	ci right 3.859691e-01	k: 26765	n:70000
KS ci ratio: 1.503757e-01	ci left: 8.890904e-03	ci right 1.035018e-02	k: 672	n:70000
FAM47A   70000 perm   15 sec   (4584 perm/sec)   p_kst 9.600000e-03   p_cons 3.823571e-01   p_joint 2.774429e-01

Joint ci ratio: 2.228437e-02	ci left: 2.757942e-01	ci right 2.820218e-01	k: 22312	n:80000
Cons ci ratio: 1.756382e-02	ci left: 3.803408e-01	ci right 3.870927e-01	k: 30697	n:80000
KS ci ratio: 1.402174e-01	ci left: 8.996219e-03	ci right 1.036469e-02	k: 773	n:80000
FAM47A   80000 perm   18 sec   (4493 perm/sec)   p_kst 9.662500e-03   p_cons 3.837125e-01   p_joint 2.789000e-01

Joint ci ratio: 2.106526e-02	ci left: 2.749196e-01	ci right 2.807836e-01	k: 25006	n:90000
Cons ci ratio: 1.658708e-02	ci left: 3.797447e-01	ci right 3.861073e-01	k: 34463	n:90000
KS ci ratio: 1.325639e-01	ci left: 8.983993e-03	ci right 1.027013e-02	k: 865	n:90000
FAM47A   90000 perm   20 sec   (4410 perm/sec)   p_kst 9.611111e-03   p_cons 3.829222e-01   p_joint 2.778444e-01

Joint ci ratio: 1.997309e-02	ci left: 2.752945e-01	ci right 2.808584e-01	k: 27807	n:100000
Cons ci ratio: 1.574999e-02	ci left: 3.794863e-01	ci right 3.855206e-01	k: 38250	n:100000
KS ci ratio: 1.261072e-01	ci left: 8.966156e-03	ci right 1.018254e-02	k: 956	n:100000
FAM47A   100000 perm   23 sec   (4332 perm/sec)   p_kst 9.560000e-03   p_cons 3.825000e-01   p_joint 2.780700e-01

Joint ci ratio: 2.426469e-02	ci left: 1.894317e-01	ci right 1.940937e-01	k: 21093	n:110000
Cons ci ratio: 1.503759e-02	ci left: 3.789821e-01	ci right 3.847333e-01	k: 42004	n:110000
KS ci ratio: 1.206267e-01	ci left: 8.935170e-03	ci right 1.009091e-02	k: 1045	n:110000
FAM47A   110000 perm   26 sec   (4259 perm/sec)   p_kst 9.500000e-03   p_cons 3.818545e-01   p_joint 1.917545e-01

Joint ci ratio: 2.322645e-02	ci left: 1.896006e-01	ci right 1.940643e-01	k: 23019	n:120000
Cons ci ratio: 1.440874e-02	ci left: 3.787337e-01	ci right 3.842387e-01	k: 45778	n:120000
KS ci ratio: 1.158038e-01	ci left: 8.910305e-03	ci right 1.001360e-02	k: 1134	n:120000
FAM47A   120000 perm   29 sec   (4188 perm/sec)   p_kst 9.450000e-03   p_cons 3.814833e-01   p_joint 1.918250e-01

Joint ci ratio: 3.735733e-02	ci left: 7.662407e-02	ci right 7.954863e-02	k: 10150	n:130000
Cons ci ratio: 1.501215e-02	ci left: 3.414557e-01	ci right 3.466281e-01	k: 44725	n:130000
KS ci ratio: 1.110141e-01	ci left: 8.972327e-03	ci right 1.003434e-02	k: 1234	n:130000
FAM47A   130000 perm   32 sec   (4121 perm/sec)   p_kst 9.492308e-03   p_cons 3.440385e-01   p_joint 7.807692e-02

Joint ci ratio: 3.598209e-02	ci left: 7.674211e-02	ci right 7.956110e-02	k: 10940	n:140000
Cons ci ratio: 1.446320e-02	ci left: 3.416397e-01	ci right 3.466239e-01	k: 48178	n:140000
KS ci ratio: 1.066525e-01	ci left: 9.047156e-03	ci right 1.007331e-02	k: 1337	n:140000
FAM47A   140000 perm   35 sec   (4056 perm/sec)   p_kst 9.550000e-03   p_cons 3.441286e-01   p_joint 7.814286e-02

Joint ci ratio: 2.824358e-02	ci left: 1.121971e-01	ci right 1.154179e-01	k: 17070	n:150000
Cons ci ratio: 1.396687e-02	ci left: 3.419152e-01	ci right 3.467309e-01	k: 51648	n:150000
KS ci ratio: 1.033486e-01	ci left: 9.008771e-03	ci right 9.996994e-03	k: 1424	n:150000
FAM47A   150000 perm   38 sec   (3993 perm/sec)   p_kst 9.493333e-03   p_cons 3.443200e-01   p_joint 1.138000e-01

Joint ci ratio: 2.808216e-02	ci left: 1.070360e-01	ci right 1.100907e-01	k: 17369	n:160000
Cons ci ratio: 1.351237e-02	ci left: 3.423584e-01	ci right 3.470222e-01	k: 55150	n:160000
KS ci ratio: 1.002334e-01	ci left: 8.993900e-03	ci right 9.949002e-03	k: 1514	n:160000
FAM47A   160000 perm   41 sec   (3934 perm/sec)   p_kst 9.462500e-03   p_cons 3.446875e-01   p_joint 1.085563e-01

Joint ci ratio: 3.259538e-02	ci left: 7.712649e-02	ci right 7.968791e-02	k: 13328	n:170000
Cons ci ratio: 1.310994e-02	ci left: 3.423935e-01	ci right 3.469177e-01	k: 58591	n:170000
KS ci ratio: 9.769166e-02	ci left: 8.923772e-03	ci right 9.846017e-03	k: 1594	n:170000
FAM47A   170000 perm   44 sec   (3876 perm/sec)   p_kst 9.376471e-03   p_cons 3.446529e-01   p_joint 7.840000e-02

Outputting figure to mutsig2_images.part000000000061/FAM47A.2_2380_170000_0.0093765_0.34465_0.0784.png
                gene_name: FAM47A
               theta_stop: 0.098 
                    nperm: 170000 
                     p_ks: 0.0094 
        ci_ks_bounds_left: 0.0089 
       ci_ks_bounds_right: 0.0098 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.35 
                  p_joint: 0.078 
     ci_joint_bounds_left: 0.077 
    ci_joint_bounds_right: 0.080 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000061
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 61 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1640>
Subject: Job 8704200: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1640>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000062> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:34:58 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000062.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000062.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 62  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000062.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    158.72 sec.
    Max Memory :      5714 MB
    Max Swap   :      8514 MB

    Max Processes  :         7
    Max Threads    :        60

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
62
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 62
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 62: processing genes 5519 - 5609
Calculating significance of each gene.
Using projection method.
5519	FAM53B	1
5520	FAM53C	1
5521	FAM54A	1
5522	FAM54B	1
5523	FAM55A	1
5524	FAM55B	8.024206e-02
5525	FAM55C	1
5526	FAM55D	1
5527	FAM57A	1
5528	FAM57B	1
5529	FAM58A	1
5530	FAM58B	5.662428e-02
5531	FAM59A	1
5532	FAM5B	1
5533	FAM5C	2.018459e-01
5534	FAM60A	1
5535	FAM63A	1
5536	FAM63B	1.203318e-01
5537	FAM64A	6.264520e-02
5538	FAM65A	1
5539	FAM65B	1
5540	FAM65C	1
5541	FAM69B	1
5542	FAM69C	1
5543	FAM70A	1
5544	FAM70B	1.332902e-01
5545	FAM71A	1
5546	FAM71B	1
5547	FAM71C	1
5548	FAM71D	1
5549	FAM71E1	1
5550	FAM71F1	1
5551	FAM71F2	1
5552	FAM72A	1
5553	FAM72B	1
5554	FAM72D	1
5555	FAM73A	1
5556	FAM73B	1
5557	FAM75A3	1
5558	FAM75A6	1
5559	FAM75C1	1
5560	FAM76A	4.388320e-02
5561	FAM76B	1.238170e-01
5562	FAM78A	2.387302e-03
5563	FAM78B	1
5564	FAM81A	1
5565	FAM81B	1
5566	FAM82A1	1
5567	FAM82A2	1.005804e-01
5568	FAM82B	1
5569	FAM83A	8.010184e-02
5570	FAM83B	1
5571	FAM83C	1
5572	FAM83D	1.915092e-01
5573	FAM83E	1
5574	FAM83F	5.909166e-02
5575	FAM83G	1
5576	FAM83H	2.271972e-01
5577	FAM84A	8.936047e-02
5578	FAM84B	1
5579	FAM86A	1
5580	FAM86B1	1
5581	FAM86B2	1
5582	FAM86C	1
5583	FAM89A	1
5584	FAM89B	1
5585	FAM8A1	1
5586	FAM90A1	1
5587	FAM91A1	1
5588	FAM92A1	1
5589	FAM92B	1
5590	FAM96A	1
5591	FAM96B	1
5592	FAM98A	1
5593	FAM98B	1
5594	FAM98C	6.866242e-02
5595	FAM9A	1
5596	FAM9B	1
5597	FAM9C	1
5598	FANCA	1
5599	FANCB	1
5600	FANCC	1
5601	FANCD2	3.306478e-02
5602	FANCE	1
5603	FANCF	1.812084e-01
5604	FANCG	6.839748e-02
5605	FANCI	1
5606	FANCL	1
5607	FANCM	5.514897e-01
5608	FANK1	1
5609	FAP	3.121859e-01
Done

Running MutSig 2:
Scatter job 62: processing genes 5519 - 5609
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FANCD2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.827696e-02	ci left: 1.573805e-01	ci right 1.720154e-01	k: 1646	n:10000
Cons ci ratio: 3.938760e-03	ci left: 9.879601e-01	ci right 9.919467e-01	k: 9901	n:10000
KS ci ratio: 1.732451e-01	ci left: 4.446748e-02	ci right 5.299787e-02	k: 486	n:10000
FANCD2   10000 perm   2 sec   (4795 perm/sec)   p_kst 4.860000e-02   p_cons 9.901000e-01   p_joint 1.646000e-01

Joint ci ratio: 6.928976e-02	ci left: 1.331494e-01	ci right 1.427562e-01	k: 2758	n:20000
Cons ci ratio: 2.813474e-03	ci left: 9.883623e-01	ci right 9.911926e-01	k: 19797	n:20000
KS ci ratio: 1.229040e-01	ci left: 4.541801e-02	ci right 5.141416e-02	k: 967	n:20000
FANCD2   20000 perm   7 sec   (2998 perm/sec)   p_kst 4.835000e-02   p_cons 9.898500e-01   p_joint 1.379000e-01

Joint ci ratio: 5.101102e-02	ci left: 1.602549e-01	ci right 1.686769e-01	k: 4933	n:30000
Cons ci ratio: 2.231924e-03	ci left: 9.892311e-01	ci right 9.914724e-01	k: 29712	n:30000
KS ci ratio: 9.666480e-02	ci left: 4.944925e-02	ci right 5.450463e-02	k: 1558	n:30000
FANCD2   30000 perm   9 sec   (3262 perm/sec)   p_kst 5.193333e-02   p_cons 9.904000e-01   p_joint 1.644333e-01

Outputting figure to mutsig2_images.part000000000062/FANCD2.3_4663_30000_0.051933_0.9904_0.16443.png
                gene_name: FANCD2
               theta_stop: 0.097 
                    nperm: 30000 
                     p_ks: 0.052 
        ci_ks_bounds_left: 0.049 
       ci_ks_bounds_right: 0.055 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 0.99 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.17 

Current progress: 50 percent done.
FAM78A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.842255e-02	ci left: 1.920014e-01	ci right 2.077738e-01	k: 1998	n:10000
KS ci ratio: 5.316352e-02	ci left: 3.427329e-01	ci right 3.615533e-01	k: 3521	n:10000
FAM78A   10000 perm   1 sec   (6763 perm/sec)   p_kst 3.521000e-01   p_cons 1.998000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000062/FAM78A.2_860_10000_0.3521_0.1998_1.png
                gene_name: FAM78A
               theta_stop: 0.078 
                    nperm: 10000 
                     p_ks: 0.35 
        ci_ks_bounds_left: 0.34 
       ci_ks_bounds_right: 0.36 
                   p_cons: 0.20 
      ci_cons_bounds_left: 0.19 
     ci_cons_bounds_right: 0.21 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000062
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 62 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1427>
Subject: Job 8704201: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1427>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000063> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:36:25 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000063.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000063.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 63  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000063.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    289.98 sec.
    Max Memory :      5765 MB
    Max Swap   :      8457 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
63
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 63
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 63: processing genes 5610 - 5699
Calculating significance of each gene.
Using projection method.
5610	FAR1	1
5611	FAR2	1
5612	FARP1	1
5613	FARP2	1
5614	FARS2	1
5615	FARSA	2.349791e-01
5616	FARSB	1
5617	FAS	1
5618	FASLG	1
5619	FASN	5.052243e-01
5620	FASTK	1.919846e-01
5621	FASTKD1	1
5622	FASTKD2	1
5623	FASTKD3	1.238947e-01
5624	FASTKD5	1
5625	FAT1	6.896328e-01
5626	FAT2	6.971152e-01
5627	FAT3	6.880398e-01
5628	FAT4	1
5629	FATE1	1
5630	FAU	1
5631	FBF1	1
5632	FBL	1
5633	FBLIM1	1
5634	FBLN1	1
5635	FBLN2	1
5636	FBLN5	1
5637	FBLN7	1
5638	FBN1	1.569961e-01
5639	FBN2	6.593832e-01
5640	FBN3	3.625755e-01
5641	FBP1	1
5642	FBP2	1
5643	FBRS	1
5644	FBXL12	1
5645	FBXL13	1
5646	FBXL14	1
5647	FBXL15	1
5648	FBXL16	1
5649	FBXL17	1
5650	FBXL18	1
5651	FBXL19	1
5652	FBXL2	1
5653	FBXL20	6.040466e-02
5654	FBXL21	1
5655	FBXL22	1
5656	FBXL3	1
5657	FBXL4	1
5658	FBXL5	1
5659	FBXL6	1
5660	FBXL7	1
5661	FBXL8	1
5662	FBXO10	2.521874e-01
5663	FBXO11	6.198505e-02
5664	FBXO15	1
5665	FBXO16	1
5666	FBXO17	1
5667	FBXO18	1
5668	FBXO2	1
5669	FBXO21	1
5670	FBXO22	1
5671	FBXO24	1
5672	FBXO25	1
5673	FBXO27	1
5674	FBXO28	1
5675	FBXO3	1
5676	FBXO30	1
5677	FBXO31	1
5678	FBXO32	1
5679	FBXO33	1
5680	FBXO34	1
5681	FBXO36	1
5682	FBXO38	1
5683	FBXO39	1
5684	FBXO4	1
5685	FBXO40	1
5686	FBXO41	1
5687	FBXO42	3.036589e-01
5688	FBXO43	1
5689	FBXO44	1
5690	FBXO45	1
5691	FBXO46	1
5692	FBXO47	1.771446e-01
5693	FBXO48	1
5694	FBXO5	1
5695	FBXO6	1
5696	FBXO7	1
5697	FBXO8	1
5698	FBXO9	1
5699	FBXW10	1
Done

Running MutSig 2:
Scatter job 63: processing genes 5610 - 5699
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FBN1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.947396e-02	ci left: 6.292960e-01	ci right 6.482231e-01	k: 6388	n:10000
KS ci ratio: 2.561827e-02	ci left: 6.916168e-01	ci right 7.096662e-01	k: 7007	n:10000
FBN1   10000 perm   3 sec   (3045 perm/sec)   p_kst 7.007000e-01   p_cons 6.388000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000063/FBN1.3_8876_10000_0.7007_0.6388_1.png
                gene_name: FBN1
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.69 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
FBN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.130555e-02	ci left: 3.590346e-01	ci right 3.780420e-01	k: 3685	n:10000
Cons ci ratio: 5.322182e-02	ci left: 3.422361e-01	ci right 3.610504e-01	k: 3516	n:10000
KS ci ratio: 6.146986e-02	ci left: 2.801280e-01	ci right 2.979950e-01	k: 2890	n:10000
FBN2   10000 perm   3 sec   (3040 perm/sec)   p_kst 2.890000e-01   p_cons 3.516000e-01   p_joint 3.685000e-01

Outputting figure to mutsig2_images.part000000000063/FBN2.2_8999_10000_0.289_0.3516_0.3685.png
                gene_name: FBN2
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.37 
     ci_joint_bounds_left: 0.36 
    ci_joint_bounds_right: 0.38 

Current progress: 50 percent done.
FBN3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.712558e-02	ci left: 2.456887e-01	ci right 2.628547e-01	k: 2542	n:10000
Cons ci ratio: 1.043307e-01	ci left: 1.172096e-01	ci right 1.302105e-01	k: 1236	n:10000
KS ci ratio: 1.453334e-02	ci left: 8.726519e-01	ci right 8.855263e-01	k: 8792	n:10000
FBN3   10000 perm   3 sec   (3312 perm/sec)   p_kst 8.792000e-01   p_cons 1.236000e-01   p_joint 2.542000e-01

Joint ci ratio: 3.475748e-02	ci left: 3.819359e-01	ci right 3.954964e-01	k: 7774	n:20000
Cons ci ratio: 7.740712e-02	ci left: 1.092336e-01	ci right 1.180791e-01	k: 2272	n:20000
KS ci ratio: 1.040571e-02	ci left: 8.718604e-01	ci right 8.810298e-01	k: 17530	n:20000
FBN3   20000 perm   7 sec   (3009 perm/sec)   p_kst 8.765000e-01   p_cons 1.136000e-01   p_joint 3.887000e-01

Outputting figure to mutsig2_images.part000000000063/FBN3.2_8682_20000_0.8765_0.1136_0.3887.png
                gene_name: FBN3
               theta_stop: 0.077 
                    nperm: 20000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.11 
      ci_cons_bounds_left: 0.11 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.39 
     ci_joint_bounds_left: 0.38 
    ci_joint_bounds_right: 0.40 

Current progress: 75 percent done.
FBXO11
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 8.898945e-02	ci left: 1.552204e-01	ci right 1.697768e-01	k: 1624	n:10000
KS ci ratio: 2.146053e-02	ci left: 7.610165e-01	ci right 7.776263e-01	k: 7694	n:10000
FBXO11   10000 perm   2 sec   (5455 perm/sec)   p_kst 7.694000e-01   p_cons 1.624000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000063/FBXO11.2_2966_10000_0.7694_0.1624_1.png
                gene_name: FBXO11
               theta_stop: 0.089 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.17 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000063
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 63 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1652>
Subject: Job 8704202: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1652>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000064> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:40 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000064.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000064.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 64  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000064.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    212.67 sec.
    Max Memory :      5758 MB
    Max Swap   :      8465 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
64
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 64
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 64: processing genes 5700 - 5790
Calculating significance of each gene.
Using projection method.
5700	FBXW11	1
5701	FBXW12	1
5702	FBXW2	1
5703	FBXW4	1
5704	FBXW5	1
5705	FBXW7	1.583225e-01
5706	FBXW8	1
5707	FBXW9	1
5708	FCAMR	1
5709	FCAR	1
5710	FCER1A	1
5711	FCER1G	1
5712	FCER2	5.417673e-02
5713	FCF1	9.331045e-02
5714	FCGBP	4.785922e-01
5715	FCGR1A	1
5716	FCGR1B	1
5717	FCGR2A	1
5718	FCGR2B	1.591230e-02
5719	FCGR2C	1
5720	FCGR3A	1
5721	FCGR3B	1
5722	FCGRT	3.393176e-02
5723	FCHO1	1
5724	FCHO2	1
5725	FCHSD1	1
5726	FCHSD2	1
5727	FCN1	1
5728	FCN2	8.493293e-02
5729	FCN3	1
5730	FCRL1	1
5731	FCRL2	1
5732	FCRL3	1
5733	FCRL4	1
5734	FCRL5	3.069879e-01
5735	FCRL6	1
5736	FCRLA	1
5737	FCRLB	1
5738	FDFT1	1
5739	FDPS	1
5740	FDX1	1
5741	FDX1L	1
5742	FDXACB1	1
5743	FDXR	1
5744	FECH	1.206045e-01
5745	FEM1A	1
5746	FEM1B	1
5747	FEM1C	1
5748	FEN1	1
5749	FER	1
5750	FER1L5	1
5751	FER1L6	5.747643e-01
5752	FERD3L	1
In gene FERMT1 the following bins exceed PROBCAP:
    THCA-EM-A2CU-TP	categ 5	N = 1960    n = 1	mu =   3.58e-08
5753	FERMT1	5.526085e-02
5754	FERMT2	1
5755	FERMT3	1
5756	FES	1
5757	FETUB	1.951018e-02
5758	FEV	1
5759	FEZ1	1
5760	FEZ2	1
5761	FEZF1	1
5762	FEZF2	1
5763	FFAR1	1
5764	FFAR2	1
5765	FFAR3	1
5766	FGA	2.070897e-01
5767	FGB	1
5768	FGD1	2.023208e-01
5769	FGD2	4.706302e-02
5770	FGD3	2.799303e-01
5771	FGD4	3.843029e-02
5772	FGD5	2.777418e-01
5773	FGD6	1
5774	FGF1	1
5775	FGF10	1
5776	FGF11	1
5777	FGF12	1
5778	FGF13	1
5779	FGF14	1
5780	FGF16	1
5781	FGF17	1
5782	FGF18	1
5783	FGF19	1
5784	FGF2	1
5785	FGF20	1.143958e-02
5786	FGF21	1
5787	FGF22	1
5788	FGF23	1
5789	FGF3	1
5790	FGF4	1
Done

Running MutSig 2:
Scatter job 64: processing genes 5700 - 5790
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FCGBP
Processing conservation and coverage...
61% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.579714e-01	ci left: 5.340171e-02	ci right 6.265786e-02	k: 579	n:10000
Cons ci ratio: 2.166412e-01	ci left: 2.825837e-02	ci right 3.521793e-02	k: 316	n:10000
KS ci ratio: 4.056430e-03	ci left: 9.873032e-01	ci right 9.914042e-01	k: 9895	n:10000
FCGBP   10000 perm   3 sec   (2993 perm/sec)   p_kst 9.895000e-01   p_cons 3.160000e-02   p_joint 5.790000e-02

Joint ci ratio: 1.121161e-01	ci left: 5.436186e-02	ci right 6.086750e-02	k: 1151	n:20000
Cons ci ratio: 1.534422e-01	ci left: 2.917075e-02	ci right 3.406667e-02	k: 631	n:20000
KS ci ratio: 2.922905e-03	ci left: 9.875094e-01	ci right 9.904458e-01	k: 19781	n:20000
FCGBP   20000 perm   9 sec   (2206 perm/sec)   p_kst 9.890500e-01   p_cons 3.155000e-02   p_joint 5.755000e-02

Joint ci ratio: 1.030266e-01	ci left: 4.365689e-02	ci right 4.843152e-02	k: 1380	n:30000
Cons ci ratio: 1.243410e-01	ci left: 3.006950e-02	ci right 3.408846e-02	k: 961	n:30000
KS ci ratio: 2.346093e-03	ci left: 9.881759e-01	ci right 9.905279e-01	k: 29682	n:30000
FCGBP   30000 perm   13 sec   (2317 perm/sec)   p_kst 9.894000e-01   p_cons 3.203333e-02   p_joint 4.600000e-02

Joint ci ratio: 9.915964e-02	ci left: 3.573254e-02	ci right 3.948497e-02	k: 1503	n:40000
Cons ci ratio: 1.134630e-01	ci left: 2.732867e-02	ci right 3.064018e-02	k: 1158	n:40000
KS ci ratio: 2.047852e-03	ci left: 9.881644e-01	ci right 9.902136e-01	k: 39569	n:40000
FCGBP   40000 perm   17 sec   (2368 perm/sec)   p_kst 9.892250e-01   p_cons 2.895000e-02   p_joint 3.757500e-02

Joint ci ratio: 9.900486e-02	ci left: 2.889293e-02	ci right 3.192191e-02	k: 1519	n:50000
Cons ci ratio: 1.026489e-01	ci left: 2.688341e-02	ci right 2.981169e-02	k: 1416	n:50000
KS ci ratio: 1.817912e-03	ci left: 9.884425e-01	ci right 9.902600e-01	k: 49469	n:50000
FCGBP   50000 perm   21 sec   (2387 perm/sec)   p_kst 9.893800e-01   p_cons 2.832000e-02   p_joint 3.038000e-02

Joint ci ratio: 9.025130e-02	ci left: 2.910588e-02	ci right 3.187311e-02	k: 1828	n:60000
Cons ci ratio: 9.290429e-02	ci left: 2.747629e-02	ci right 3.016954e-02	k: 1728	n:60000
KS ci ratio: 1.653743e-03	ci left: 9.886000e-01	ci right 9.902521e-01	k: 59367	n:60000
FCGBP   60000 perm   25 sec   (2387 perm/sec)   p_kst 9.894500e-01   p_cons 2.880000e-02   p_joint 3.046667e-02

Outputting figure to mutsig2_images.part000000000064/FCGBP.2_16362_60000_0.98945_0.0288_0.030467.png
                gene_name: FCGBP
               theta_stop: 0.093 
                    nperm: 60000 
                     p_ks: 0.99 
        ci_ks_bounds_left: 0.99 
       ci_ks_bounds_right: 0.99 
                   p_cons: 0.029 
      ci_cons_bounds_left: 0.027 
     ci_cons_bounds_right: 0.030 
                  p_joint: 0.030 
     ci_joint_bounds_left: 0.029 
    ci_joint_bounds_right: 0.032 

Current progress: 33 percent done.
FGD2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.599129e-02	ci left: 6.854671e-01	ci right 7.036194e-01	k: 6946	n:10000
Cons ci ratio: 2.266192e-02	ci left: 7.408856e-01	ci right 7.579689e-01	k: 7495	n:10000
KS ci ratio: 4.175413e-02	ci left: 4.585802e-01	ci right 4.782382e-01	k: 4684	n:10000
FGD2   10000 perm   2 sec   (6207 perm/sec)   p_kst 4.684000e-01   p_cons 7.495000e-01   p_joint 6.946000e-01

Outputting figure to mutsig2_images.part000000000064/FGD2.2_2032_10000_0.4684_0.7495_0.6946.png
                gene_name: FGD2
               theta_stop: 0.042 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.76 
                  p_joint: 0.69 
     ci_joint_bounds_left: 0.69 
    ci_joint_bounds_right: 0.70 

Current progress: 67 percent done.
FGD4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.218770e-02	ci left: 3.511805e-01	ci right 3.701008e-01	k: 3606	n:10000
KS ci ratio: 6.103901e-02	ci left: 2.830009e-01	ci right 3.009204e-01	k: 2919	n:10000
FGD4   10000 perm   2 sec   (5223 perm/sec)   p_kst 2.919000e-01   p_cons 3.606000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000064/FGD4.2_2361_10000_0.2919_0.3606_1.png
                gene_name: FGD4
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000064
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 64 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1644>
Subject: Job 8704204: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1644>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000065> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:31 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000065.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000065.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 65  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000065.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    182.62 sec.
    Max Memory :      5986 MB
    Max Swap   :      8762 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
65
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 65
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 65: processing genes 5791 - 5880
Calculating significance of each gene.
Using projection method.
5791	FGF5	1
5792	FGF6	1
5793	FGF7	3.012459e-02
5794	FGF8	1
5795	FGF9	1
5796	FGFBP1	1
5797	FGFBP2	1
5798	FGFBP3	1
5799	FGFR1	1
5800	FGFR1OP	1
5801	FGFR1OP2	1
5802	FGFR2	1
5803	FGFR3	1
5804	FGFR4	1
5805	FGFRL1	1
5806	FGG	1
5807	FGGY	1
5808	FGL1	1
5809	FGL2	1
5810	FGR	1
5811	FH	1.413515e-01
5812	FHDC1	1
5813	FHIT	1
5814	FHL1	1
5815	FHL2	1
5816	FHL3	5.723736e-02
5817	FHL5	7.944292e-02
5818	FHOD1	3.473599e-01
5819	FHOD3	1.877525e-01
5820	FIBCD1	1
5821	FIBIN	1
5822	FIBP	1
5823	FICD	1
5824	FIG4	1
5825	FIGF	1.447203e-01
5826	FIGLA	1
5827	FIGN	1
5828	FIGNL1	2.423136e-01
5829	FILIP1	1.456988e-01
5830	FILIP1L	3.239707e-02
5831	FIP1L1	1
5832	FIS1	1
5833	FITM1	1
5834	FITM2	8.735647e-02
5835	FIZ1	1
5836	FJX1	1
5837	FKBP10	1
5838	FKBP11	1
5839	FKBP14	1
5840	FKBP15	1
5841	FKBP1A	1
5842	FKBP1B	1
5843	FKBP2	1
5844	FKBP3	1
5845	FKBP4	1
5846	FKBP5	1
5847	FKBP6	1
5848	FKBP7	5.018103e-02
5849	FKBP8	1
5850	FKBP9	1
5851	FKBPL	7.850939e-02
5852	FKRP	4.584279e-04
5853	FKSG83	1
5854	FKTN	1
5855	FLAD1	1
5856	FLCN	1
5857	FLG	3.441826e-01
5858	FLG2	7.289013e-02
5859	FLI1	1
5860	FLII	2.345184e-02
5861	FLJ10357	4.264693e-01
5862	FLJ35220	1
5863	FLJ37543	1
5864	FLJ43860	1
5865	FLJ44635	1
5866	FLJ46321	2.302386e-01
5867	FLNA	1
5868	FLNB	1
5869	FLNC	1.305621e-01
5870	FLOT1	3.357808e-02
5871	FLOT2	1
5872	FLRT1	1
5873	FLRT2	6.210831e-02
5874	FLRT3	1
5875	FLT1	1
5876	FLT3	1
5877	FLT3LG	7.062696e-02
5878	FLT4	1
5879	FLVCR1	1
5880	FLVCR2	1.740987e-01
Done

Running MutSig 2:
Scatter job 65: processing genes 5791 - 5880
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FLG
Processing conservation and coverage...
81% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.374371e-02	ci left: 2.655721e-01	ci right 2.831595e-01	k: 2743	n:10000
Cons ci ratio: 1.326553e-02	ci left: 8.911840e-01	ci right 9.031835e-01	k: 8973	n:10000
KS ci ratio: 8.818083e-02	ci left: 1.576751e-01	ci right 1.723206e-01	k: 1649	n:10000
FLG   10000 perm   3 sec   (3233 perm/sec)   p_kst 1.649000e-01   p_cons 8.973000e-01   p_joint 2.743000e-01

Outputting figure to mutsig2_images.part000000000065/FLG.4_12194_10000_0.1649_0.8973_0.2743.png
                gene_name: FLG
               theta_stop: 0.088 
                    nperm: 10000 
                     p_ks: 0.16 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.17 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.27 
    ci_joint_bounds_right: 0.28 

Current progress: 17 percent done.
FLG2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 9.436336e-03	ci left: 9.406618e-01	ci right 9.496766e-01	k: 9453	n:10000
KS ci ratio: 1.702089e-02	ci left: 8.340910e-01	ci right 8.485096e-01	k: 8414	n:10000
FLG2   10000 perm   2 sec   (4358 perm/sec)   p_kst 8.414000e-01   p_cons 9.453000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000065/FLG2.3_7184_10000_0.8414_0.9453_1.png
                gene_name: FLG2
               theta_stop: 0.017 
                    nperm: 10000 
                     p_ks: 0.84 
        ci_ks_bounds_left: 0.83 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
FLII
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.172700e-01	ci left: 9.457666e-02	ci right 1.064572e-01	k: 1004	n:10000
Cons ci ratio: 6.127603e-02	ci left: 2.814158e-01	ci right 2.993065e-01	k: 2903	n:10000
KS ci ratio: 1.254876e-01	ci left: 8.329513e-02	ci right 9.454569e-02	k: 888	n:10000
FLII   10000 perm   2 sec   (5087 perm/sec)   p_kst 8.880000e-02   p_cons 2.903000e-01   p_joint 1.004000e-01

Joint ci ratio: 8.009590e-02	ci left: 1.026501e-01	ci right 1.112645e-01	k: 2138	n:20000
Cons ci ratio: 4.333415e-02	ci left: 2.840152e-01	ci right 2.966458e-01	k: 5806	n:20000
KS ci ratio: 8.768346e-02	ci left: 8.685265e-02	ci right 9.486676e-02	k: 1816	n:20000
FLII   20000 perm   4 sec   (4599 perm/sec)   p_kst 9.080000e-02   p_cons 2.903000e-01   p_joint 1.069000e-01

Outputting figure to mutsig2_images.part000000000065/FLII.3_3930_20000_0.0908_0.2903_0.1069.png
                gene_name: FLII
               theta_stop: 0.088 
                    nperm: 20000 
                     p_ks: 0.091 
        ci_ks_bounds_left: 0.087 
       ci_ks_bounds_right: 0.095 
                   p_cons: 0.29 
      ci_cons_bounds_left: 0.28 
     ci_cons_bounds_right: 0.30 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.10 
    ci_joint_bounds_right: 0.11 

Current progress: 50 percent done.
FLNC
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.103802e-03	ci left: 9.444016e-01	ci right 9.531346e-01	k: 9489	n:10000
Cons ci ratio: 2.751516e-02	ci left: 6.605848e-01	ci right 6.791161e-01	k: 6699	n:10000
KS ci ratio: 1.659824e-02	ci left: 8.408121e-01	ci right 8.549846e-01	k: 8480	n:10000
FLNC   10000 perm   3 sec   (3845 perm/sec)   p_kst 8.480000e-01   p_cons 6.699000e-01   p_joint 9.489000e-01

Outputting figure to mutsig2_images.part000000000065/FLNC.3_8370_10000_0.848_0.6699_0.9489.png
                gene_name: FLNC
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.85 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.67 
      ci_cons_bounds_left: 0.66 
     ci_cons_bounds_right: 0.68 
                  p_joint: 0.95 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.95 

Current progress: 67 percent done.
FILIP1L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.223702e-02	ci left: 5.868075e-01	ci right 6.061363e-01	k: 5965	n:10000
KS ci ratio: 2.757738e-02	ci left: 6.595781e-01	ci right 6.781235e-01	k: 6689	n:10000
FILIP1L   10000 perm   2 sec   (5478 perm/sec)   p_kst 6.689000e-01   p_cons 5.965000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000065/FILIP1L.2_3449_10000_0.6689_0.5965_1.png
                gene_name: FILIP1L
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.67 
        ci_ks_bounds_left: 0.66 
       ci_ks_bounds_right: 0.68 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
FKRP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.519761e-02	ci left: 6.985753e-01	ci right 7.165037e-01	k: 7076	n:10000
KS ci ratio: 2.900942e-02	ci left: 6.366364e-01	ci right 6.554785e-01	k: 6461	n:10000
FKRP   10000 perm   2 sec   (6364 perm/sec)   p_kst 6.461000e-01   p_cons 7.076000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000065/FKRP.2_1492_10000_0.6461_0.7076_1.png
                gene_name: FKRP
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.65 
        ci_ks_bounds_left: 0.64 
       ci_ks_bounds_right: 0.66 
                   p_cons: 0.71 
      ci_cons_bounds_left: 0.70 
     ci_cons_bounds_right: 0.72 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000065
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 65 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1643>
Subject: Job 8704206: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1643>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000066> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:35:06 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000066.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000066.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 66  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000066.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    159.94 sec.
    Max Memory :      5705 MB
    Max Swap   :      8404 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
66
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 66
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 66: processing genes 5881 - 5971
Calculating significance of each gene.
Using projection method.
5881	FLYWCH1	1
5882	FLYWCH2	1
5883	FMN1	1
5884	FMN2	1
5885	FMNL1	2.168245e-01
5886	FMNL2	1
5887	FMNL3	2.666891e-01
5888	FMO1	1
5889	FMO2	1
5890	FMO3	1.075234e-01
5891	FMO4	1
5892	FMO5	1
5893	FMOD	1
5894	FMR1	1
5895	FMR1NB	1
5896	FN1	4.812327e-01
5897	FN3K	1
5898	FN3KRP	1
5899	FNBP1	1
5900	FNBP1L	1
5901	FNBP4	8.289854e-02
5902	FNDC1	1
5903	FNDC3A	9.409469e-02
5904	FNDC3B	1
5905	FNDC4	1
5906	FNDC5	1
5907	FNDC7	1.951673e-01
5908	FNDC8	1
5909	FNIP1	1
5910	FNIP2	1
5911	FNTA	1
In gene FNTB the following bins exceed PROBCAP:
    THCA-EM-A1CW-TP	categ 6	N = 1362    n = 1	mu =   1.37e-07
5912	FNTB	1.022107e-01
5913	FOLH1	1
5914	FOLH1B	1
5915	FOLR1	1
5916	FOLR2	1
5917	FOLR3	1
5918	FOLR4	1
5919	FOS	1
5920	FOSB	1
5921	FOSL1	1
5922	FOSL2	1
5923	FOXA1	1
5924	FOXA2	1
5925	FOXA3	1
5926	FOXB1	1
5927	FOXB2	1
5928	FOXC1	1
5929	FOXC2	7.445172e-02
5930	FOXD1	1
5931	FOXD2	1
5932	FOXD3	1
5933	FOXD4	1
5934	FOXD4L1	2.093015e-01
5935	FOXD4L3	1
5936	FOXD4L5	1
5937	FOXE1	1
5938	FOXE3	1
5939	FOXF1	1
5940	FOXF2	1
5941	FOXG1	1
5942	FOXH1	1
5943	FOXI1	1
5944	FOXI2	1
5945	FOXJ1	1
5946	FOXJ2	1
5947	FOXJ3	1
5948	FOXK1	1
5949	FOXK2	2.634220e-01
5950	FOXL1	1
5951	FOXL2	1
5952	FOXM1	1
5953	FOXN1	1
5954	FOXN2	1
5955	FOXN3	1
5956	FOXN4	1
In gene FOXO1 the following bins exceed PROBCAP:
    THCA-BJ-A190-TP	categ 6	N = 1363    n = 1	mu =   1.71e-07
5957	FOXO1	1.238430e-01
5958	FOXO3	1
5959	FOXO4	1
5960	FOXP1	1
5961	FOXP2	2.407531e-01
5962	FOXP3	1
5963	FOXP4	1.519778e-01
5964	FOXQ1	1
5965	FOXR1	1
5966	FOXR2	1
5967	FOXRED1	1
5968	FOXRED2	1
5969	FOXS1	1
5970	FPGS	1
5971	FPGT	1
Done

Running MutSig 2:
Scatter job 66: processing genes 5881 - 5971
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FNDC3A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.114056e-03	ci left: 9.869754e-01	ci right 9.911324e-01	k: 9892	n:10000
Cons ci ratio: 4.081055e-02	ci left: 4.699653e-01	ci right 4.896465e-01	k: 4798	n:10000
KS ci ratio: 6.190635e-02	ci left: 2.772555e-01	ci right 2.950692e-01	k: 2861	n:10000
FNDC3A   10000 perm   2 sec   (5280 perm/sec)   p_kst 2.861000e-01   p_cons 4.798000e-01   p_joint 9.892000e-01

Outputting figure to mutsig2_images.part000000000066/FNDC3A.2_3708_10000_0.2861_0.4798_0.9892.png
                gene_name: FNDC3A
               theta_stop: 0.062 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.49 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000066
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 66 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1723>
Subject: Job 8704209: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1723>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000067> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:34:29 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000067.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000067.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 67  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000067.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    102.97 sec.
    Max Memory :      5802 MB
    Max Swap   :      8512 MB

    Max Processes  :         7
    Max Threads    :        72

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
67
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 67
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 67: processing genes 5972 - 6061
Calculating significance of each gene.
Using projection method.
5972	FPR1	1
5973	FPR2	1
5974	FPR3	1
5975	FRA10AC1	1
5976	FRAS1	1
5977	FREM1	1.857474e-01
5978	FREM2	1
5979	FRG1	1
5980	FRG2B	1
5981	FRK	1
5982	FRMD1	1
5983	FRMD3	1
5984	FRMD4A	3.739677e-01
5985	FRMD4B	1
5986	FRMD5	1
5987	FRMD6	1
5988	FRMD7	1
5989	FRMD8	1
5990	FRMPD1	2.668787e-01
5991	FRMPD2	3.847335e-01
5992	FRMPD4	2.248537e-01
5993	FRRS1	1.568918e-01
5994	FRS2	1
5995	FRS3	7.067396e-02
5996	FRY	3.206508e-01
5997	FRYL	4.927362e-01
5998	FRZB	1
In gene FSCB the following bins exceed PROBCAP:
    THCA-ET-A3DQ-TP	categ 6	N = 2405    n = 1	mu =   3.44e-08
5999	FSCB	6.674607e-04
6000/18093 6000	FSCN1	1
6001	FSCN2	1
6002	FSCN3	1
6003	FSD1	1
6004	FSD2	1
6005	FSHB	1
6006	FSHR	1
6007	FSIP1	1
6008	FST	1
6009	FSTL1	1
6010	FSTL3	1
6011	FSTL4	1
6012	FSTL5	1
6013	FTCD	1
6014	FTH1	6.064921e-02
6015	FTHL17	1
6016	FTL	1
6017	FTMT	1
6018	FTO	1
6019	FTSJ1	1
6020	FTSJ2	1
6021	FTSJ3	1
6022	FTSJD1	1
6023	FTSJD2	1
6024	FUBP1	1
6025	FUBP3	1
6026	FUCA1	1
6027	FUCA2	1
6028	FUK	2.139901e-01
6029	FUNDC1	1.184045e-02
6030	FUNDC2	1
6031	FURIN	1
6032	FUS	1
6033	FUT1	1
6034	FUT10	1.973139e-01
6035	FUT11	1
6036	FUT2	1
6037	FUT3	1.234955e-01
6038	FUT4	1
6039	FUT5	1
6040	FUT6	1
6041	FUT7	1
6042	FUT8	1
6043	FUT9	1
6044	FUZ	1.798893e-02
6045	FXC1	1
6046	FXN	1
6047	FXR1	2.682658e-01
6048	FXR2	1
6049	FXYD1	1
6050	FXYD2	1
6051	FXYD3	1
6052	FXYD4	1
6053	FXYD5	1
6054	FXYD6	1
6055	FXYD7	1
6056	FYB	1
6057	FYCO1	1
6058	FYN	1.705119e-01
6059	FYTTD1	1
6060	FZD1	1
6061	FZD10	1.789128e-01
Done

Running MutSig 2:
Scatter job 67: processing genes 5972 - 6061
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FSCB
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 9.206414e-03	ci left: 9.432583e-01	ci right 9.520786e-01	k: 9478	n:10000
KS ci ratio: 3.259983e-02	ci left: 5.813888e-01	ci right 6.007581e-01	k: 5911	n:10000
FSCB   10000 perm   2 sec   (5950 perm/sec)   p_kst 5.911000e-01   p_cons 9.478000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000067/FSCB.3_2482_10000_0.5911_0.9478_1.png
                gene_name: FSCB
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
FREM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.014615e-02	ci left: 4.781577e-01	ci right 4.978493e-01	k: 4880	n:10000
Cons ci ratio: 5.396524e-02	ci left: 3.359772e-01	ci right 3.547130e-01	k: 3453	n:10000
KS ci ratio: 2.189552e-02	ci left: 7.537301e-01	ci right 7.705170e-01	k: 7622	n:10000
FREM1   10000 perm   2 sec   (4748 perm/sec)   p_kst 7.622000e-01   p_cons 3.453000e-01   p_joint 4.880000e-01

Outputting figure to mutsig2_images.part000000000067/FREM1.2_6734_10000_0.7622_0.3453_0.488.png
                gene_name: FREM1
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.76 
        ci_ks_bounds_left: 0.75 
       ci_ks_bounds_right: 0.77 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.35 
                  p_joint: 0.49 
     ci_joint_bounds_left: 0.48 
    ci_joint_bounds_right: 0.50 

Current progress: 67 percent done.
FRY
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.590211e-03	ci left: 9.388977e-01	ci right 9.480418e-01	k: 9436	n:10000
Cons ci ratio: 3.314893e-02	ci left: 5.732631e-01	ci right 5.926885e-01	k: 5830	n:10000
KS ci ratio: 1.002348e-02	ci left: 9.338193e-01	ci right 9.433233e-01	k: 9387	n:10000
FRY   10000 perm   2 sec   (4213 perm/sec)   p_kst 9.387000e-01   p_cons 5.830000e-01   p_joint 9.436000e-01

Outputting figure to mutsig2_images.part000000000067/FRY.2_9286_10000_0.9387_0.583_0.9436.png
                gene_name: FRY
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.93 
       ci_ks_bounds_right: 0.94 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.59 
                  p_joint: 0.94 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.95 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000067
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 67 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1726>
Subject: Job 8704211: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1726>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000068> was used as the working directory.
Started at Thu Nov 15 19:32:42 2012
Results reported at Thu Nov 15 19:34:24 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000068.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000068.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 68  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000068.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :     92.64 sec.
    Max Memory :      5701 MB
    Max Swap   :      8478 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
68
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 68
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 68: processing genes 6062 - 6152
Calculating significance of each gene.
Using projection method.
6062	FZD2	1
6063	FZD3	1.243519e-01
6064	FZD4	1
6065	FZD5	1
6066	FZD6	1
6067	FZD7	1
6068	FZD8	3.166597e-02
6069	FZD9	1
6070	FZR1	2.054345e-01
6071	G0S2	1
6072	G2E3	2.405124e-01
6073	G3BP1	1
6074	G3BP2	1
6075	G6PC	1
6076	G6PC2	1
6077	G6PC3	1
6078	G6PD	1
6079	GAA	1
6080	GAB1	1
6081	GAB2	1
6082	GAB3	1
6083	GAB4	5.846644e-02
6084	GABARAP	1
6085	GABARAPL1	1
6086	GABARAPL2	1
6087	GABBR1	1
6088	GABBR2	1
6089	GABPA	1
6090	GABPB1	1
6091	GABPB2	1
6092	GABRA1	1
6093	GABRA2	1
6094	GABRA3	1.918699e-01
6095	GABRA4	1
6096	GABRA5	1
6097	GABRA6	1.499145e-01
6098	GABRB1	1
6099	GABRB2	1
6100	GABRB3	5.015757e-02
6101	GABRD	1.842229e-01
6102	GABRE	1.179982e-01
6103	GABRG1	1
6104	GABRG2	1
6105	GABRG3	1
6106	GABRP	1
6107	GABRQ	1.253658e-01
6108	GABRR1	1
6109	GABRR2	8.093568e-02
6110	GABRR3	1
6111	GAD1	1
6112	GAD2	8.498121e-02
6113	GADD45A	1
6114	GADD45B	1
6115	GADD45G	1
6116	GADD45GIP1	1
6117	GADL1	1
6118	GAGE1	1
6119	GAGE10	1
6120	GAGE13	1
6121	GAGE2B	1
6122	GAGE2E	1
6123	GAGE8	1
6124	GAK	1
6125	GAL	1
6126	GAL3ST1	1
6127	GAL3ST2	1
6128	GAL3ST3	1
6129	GAL3ST4	1
6130	GALC	1
6131	GALE	1
6132	GALK1	1
6133	GALK2	1
6134	GALM	1
6135	GALNS	1
6136	GALNT1	1
6137	GALNT10	1.747412e-01
6138	GALNT11	1
6139	GALNT12	1
6140	GALNT13	1
6141	GALNT14	4.848625e-02
6142	GALNT2	1.208078e-01
6143	GALNT3	1
6144	GALNT4	1
6145	GALNT5	1
6146	GALNT6	1
6147	GALNT7	5.985702e-02
6148	GALNT8	1.387840e-01
6149	GALNT9	1
6150	GALNTL1	2.207416e-01
6151	GALNTL2	1
6152	GALNTL4	1.967271e-01
Done

Running MutSig 2:
Scatter job 68: processing genes 6062 - 6152
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
FZD8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.382843e-02	ci left: 5.633354e-01	ci right 5.828220e-01	k: 5731	n:10000
KS ci ratio: 3.957213e-02	ci left: 4.853532e-01	ci right 5.050496e-01	k: 4952	n:10000
FZD8   10000 perm   2 sec   (6429 perm/sec)   p_kst 4.952000e-01   p_cons 5.731000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000068/FZD8.2_2089_10000_0.4952_0.5731_1.png
                gene_name: FZD8
               theta_stop: 0.040 
                    nperm: 10000 
                     p_ks: 0.50 
        ci_ks_bounds_left: 0.49 
       ci_ks_bounds_right: 0.51 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000068
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 68 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1557>
Subject: Job 8704212: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1557>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000069> was used as the working directory.
Started at Thu Nov 15 19:32:48 2012
Results reported at Thu Nov 15 19:36:11 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000069.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000069.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 69  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000069.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    286.96 sec.
    Max Memory :      6078 MB
    Max Swap   :      8884 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
69
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 69
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 69: processing genes 6153 - 6242
Calculating significance of each gene.
Using projection method.
6153	GALNTL5	1
6154	GALNTL6	1
6155	GALP	1
6156	GALR1	1
6157	GALR2	1
6158	GALR3	1
6159	GALT	1.756175e-02
6160	GAMT	1
6161	GAN	1
6162	GANAB	1.149462e-01
6163	GANC	1
6164	GAP43	1
6165	GAPDH	1
6166	GAPDHS	1
6167	GAPT	1
6168	GAPVD1	2.042414e-01
6169	GAR1	1
6170	GARNL3	3.160264e-01
6171	GARS	1.737377e-01
6172	GART	1
6173	GAS1	2.092540e-02
6174	GAS2	1
6175	GAS2L1	1
6176	GAS2L2	1.659680e-01
6177	GAS2L3	1
6178	GAS6	1
6179	GAS7	1
6180	GAS8	1
6181	GAST	1
6182	GATA1	1
6183	GATA2	1
6184	GATA3	1
6185	GATA4	1
6186	GATA5	8.530124e-03
6187	GATA6	5.856399e-02
6188	GATAD1	1
6189	GATAD2A	1
6190	GATAD2B	1.940014e-01
6191	GATC	1
6192	GATM	1
6193	GATS	1
6194	GATSL3	1
6195	GBA	1
6196	GBA2	1
6197	GBA3	1
6198	GBAS	1
6199	GBE1	1
In gene GBF1 the following bins exceed PROBCAP:
    THCA-DO-A1K0-TP	categ 6	N = 5736    n = 1	mu =   3.48e-08
    THCA-EM-A3O8-TP	categ 6	N = 5736    n = 1	mu =   6.74e-08
6200	GBF1	4.287421e-03
6201	GBGT1	1
6202	GBP1	1
6203	GBP2	7.451505e-02
6204	GBP3	1
6205	GBP4	1
6206	GBP5	2.783593e-02
6207	GBP6	1
6208	GBP7	1
6209	GBX1	1
6210	GBX2	1
6211	GC	1
6212	GCA	1
6213	GCAT	1
6214	GCC1	1
In gene GCC2 the following bins exceed PROBCAP:
    THCA-FK-A3SB-TP	categ 6	N = 4920    n = 1	mu =   3.37e-08
6215	GCC2	7.193332e-02
6216	GCDH	1
6217	GCET2	1
6218	GCFC1	1
6219	GCG	1
6220	GCH1	1
6221	GCHFR	1
6222	GCK	1
6223	GCKR	1
6224	GCLC	1
6225	GCLM	1
6226	GCM1	1
6227	GCM2	1
6228	GCN1L1	2.479916e-01
6229	GCNT1	1
6230	GCNT2	1
6231	GCNT3	1
6232	GCNT4	1
6233	GCOM1	1
6234	GCSH	3.173743e-02
6235	GDA	1
6236	GDAP1	1
6237	GDAP1L1	1
6238	GDAP2	1
6239	GDE1	1
6240	GDF10	1
6241	GDF11	1
6242	GDF15	1
Done

Running MutSig 2:
Scatter job 69: processing genes 6153 - 6242
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
GBF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.538251e-02	ci left: 8.597792e-01	ci right 8.732065e-01	k: 8666	n:10000
Cons ci ratio: 2.125490e-02	ci left: 7.644585e-01	ci right 7.809823e-01	k: 7728	n:10000
KS ci ratio: 2.695096e-02	ci left: 6.697486e-01	ci right 6.881471e-01	k: 6790	n:10000
GBF1   10000 perm   3 sec   (3532 perm/sec)   p_kst 6.790000e-01   p_cons 7.728000e-01   p_joint 8.666000e-01

Outputting figure to mutsig2_images.part000000000069/GBF1.4_5736_10000_0.679_0.7728_0.8666.png
                gene_name: GBF1
               theta_stop: 0.027 
                    nperm: 10000 
                     p_ks: 0.68 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.69 
                   p_cons: 0.77 
      ci_cons_bounds_left: 0.76 
     ci_cons_bounds_right: 0.78 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.86 
    ci_joint_bounds_right: 0.87 

Current progress: 20 percent done.
GALT
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.533159e-02	ci left: 6.963564e-01	ci right 7.143239e-01	k: 7054	n:10000
Cons ci ratio: 2.024777e-02	ci left: 7.812748e-01	ci right 7.973563e-01	k: 7894	n:10000
KS ci ratio: 2.812695e-02	ci left: 6.507205e-01	ci right 6.693861e-01	k: 6601	n:10000
GALT   10000 perm   1 sec   (7014 perm/sec)   p_kst 6.601000e-01   p_cons 7.894000e-01   p_joint 7.054000e-01

Outputting figure to mutsig2_images.part000000000069/GALT.2_1184_10000_0.6601_0.7894_0.7054.png
                gene_name: GALT
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.66 
        ci_ks_bounds_left: 0.65 
       ci_ks_bounds_right: 0.67 
                   p_cons: 0.79 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.80 
                  p_joint: 0.71 
     ci_joint_bounds_left: 0.70 
    ci_joint_bounds_right: 0.71 

Current progress: 40 percent done.
GBP5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.986464e-02	ci left: 6.231641e-01	ci right 6.421586e-01	k: 6327	n:10000
Cons ci ratio: 3.651132e-02	ci left: 5.255657e-01	ci right 5.452137e-01	k: 5354	n:10000
KS ci ratio: 5.722203e-02	ci left: 3.101662e-01	ci right 3.285391e-01	k: 3193	n:10000
GBP5   10000 perm   2 sec   (6552 perm/sec)   p_kst 3.193000e-01   p_cons 5.354000e-01   p_joint 6.327000e-01

Outputting figure to mutsig2_images.part000000000069/GBP5.2_1801_10000_0.3193_0.5354_0.6327.png
                gene_name: GBP5
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.54 
      ci_cons_bounds_left: 0.53 
     ci_cons_bounds_right: 0.55 
                  p_joint: 0.63 
     ci_joint_bounds_left: 0.62 
    ci_joint_bounds_right: 0.64 

Current progress: 60 percent done.
GCC2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.721990e-02	ci left: 3.982459e-01	ci right 4.176078e-01	k: 4079	n:10000
Cons ci ratio: 4.119669e-02	ci left: 4.652708e-01	ci right 4.849437e-01	k: 4751	n:10000
KS ci ratio: 9.623583e-02	ci left: 1.354096e-01	ci right 1.491994e-01	k: 1422	n:10000
GCC2   10000 perm   2 sec   (4526 perm/sec)   p_kst 1.422000e-01   p_cons 4.751000e-01   p_joint 4.079000e-01

Outputting figure to mutsig2_images.part000000000069/GCC2.2_5147_10000_0.1422_0.4751_0.4079.png
                gene_name: GCC2
               theta_stop: 0.096 
                    nperm: 10000 
                     p_ks: 0.14 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.48 
                  p_joint: 0.41 
     ci_joint_bounds_left: 0.40 
    ci_joint_bounds_right: 0.42 

Current progress: 80 percent done.
GCN1L1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.826493e-02	ci left: 6.485067e-01	ci right 6.672012e-01	k: 6579	n:10000
Cons ci ratio: 3.017375e-02	ci left: 6.183401e-01	ci right 6.373854e-01	k: 6279	n:10000
KS ci ratio: 3.089463e-02	ci left: 6.071884e-01	ci right 6.263435e-01	k: 6168	n:10000
GCN1L1   10000 perm   3 sec   (3508 perm/sec)   p_kst 6.168000e-01   p_cons 6.279000e-01   p_joint 6.579000e-01

Outputting figure to mutsig2_images.part000000000069/GCN1L1.2_8248_10000_0.6168_0.6279_0.6579.png
                gene_name: GCN1L1
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.62 
        ci_ks_bounds_left: 0.61 
       ci_ks_bounds_right: 0.63 
                   p_cons: 0.63 
      ci_cons_bounds_left: 0.62 
     ci_cons_bounds_right: 0.64 
                  p_joint: 0.66 
     ci_joint_bounds_left: 0.65 
    ci_joint_bounds_right: 0.67 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000069
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 69 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1551>
Subject: Job 8704213: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1551>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000070> was used as the working directory.
Started at Thu Nov 15 19:32:55 2012
Results reported at Thu Nov 15 19:38:30 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000070.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000070.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 70  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000070.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    258.78 sec.
    Max Memory :      5696 MB
    Max Swap   :      8342 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
70
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 70
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 70: processing genes 6243 - 6333
Calculating significance of each gene.
Using projection method.
6243	GDF2	1
6244	GDF3	1
6245	GDF5	1
6246	GDF6	6.558119e-02
6247	GDF7	1
6248	GDF9	1
6249	GDI1	1
6250	GDI2	1
6251	GDNF	1
6252	GDPD1	2.467320e-02
6253	GDPD2	1
6254	GDPD3	1
6255	GDPD4	1
6256	GDPD5	1
6257	GEFT	1
6258	GEM	1
6259	GEMIN4	1
6260	GEMIN5	4.952372e-01
6261	GEMIN6	1
6262	GEMIN7	1
6263	GEMIN8	1
6264	GEN1	1
6265	GET4	1
6266	GFAP	1
6267	GFER	1
6268	GFI1	1.797647e-02
6269	GFI1B	1
6270	GFM1	1
6271	GFM2	1
6272	GFOD1	1.641882e-01
6273	GFOD2	1
6274	GFPT1	2.354145e-01
6275	GFPT2	1
6276	GFRA1	1
6277	GFRA2	1
6278	GFRA3	1.768750e-01
6279	GFRAL	1
6280	GGA1	1
6281	GGA2	1.611224e-01
6282	GGA3	1
6283	GGCT	1
6284	GGCX	1
6285	GGH	1
6286	GGN	1
6287	GGNBP2	1
6288	GGPS1	1
6289	GGT1	2.802168e-02
6290	GGT5	1
6291	GGT6	1
6292	GGT7	1
6293	GGTLC1	1
6294	GGTLC2	1
6295	GH1	1
6296	GH2	1
6297	GHDC	1
6298	GHITM	1
6299	GHR	3.914034e-02
6300	GHRH	1
6301	GHRHR	1
6302	GHRL	1
6303	GHSR	1
6304	GIF	1
In gene GIGYF1 the following bins exceed PROBCAP:
    THCA-EL-A3D1-TP	categ 6	N = 2116    n = 1	mu =   7.33e-08
6305	GIGYF1	4.493759e-03
6306	GIGYF2	1
6307	GIMAP1	1
6308	GIMAP2	1.706520e-02
6309	GIMAP4	1.481648e-01
6310	GIMAP5	1.411405e-01
6311	GIMAP6	1
6312	GIMAP7	1
6313	GIMAP8	2.423790e-01
6314	GIN1	2.125462e-01
6315	GINS1	1
6316	GINS2	1
6317	GINS3	1
6318	GINS4	1
6319	GIP	1.432167e-02
6320	GIPC1	1
6321	GIPC2	1
6322	GIPC3	1
6323	GIPR	1
6324	GIT1	1
6325	GIT2	6.518792e-02
6326	GJA1	1
6327	GJA10	1
6328	GJA3	1
6329	GJA4	1
6330	GJA5	1
6331	GJA8	1.628086e-01
6332	GJA9	1
6333	GJB1	1
Done

Running MutSig 2:
Scatter job 70: processing genes 6243 - 6333
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
GIGYF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.686500e-02	ci left: 5.207608e-01	ci right 5.404213e-01	k: 5306	n:10000
Cons ci ratio: 2.880677e-02	ci left: 6.398548e-01	ci right 6.586581e-01	k: 6493	n:10000
KS ci ratio: 5.078065e-02	ci left: 3.638081e-01	ci right 3.828658e-01	k: 3733	n:10000
GIGYF1   10000 perm   3 sec   (3942 perm/sec)   p_kst 3.733000e-01   p_cons 6.493000e-01   p_joint 5.306000e-01

Outputting figure to mutsig2_images.part000000000070/GIGYF1.3_3204_10000_0.3733_0.6493_0.5306.png
                gene_name: GIGYF1
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.65 
      ci_cons_bounds_left: 0.64 
     ci_cons_bounds_right: 0.66 
                  p_joint: 0.53 
     ci_joint_bounds_left: 0.52 
    ci_joint_bounds_right: 0.54 

Current progress: 50 percent done.
GGT1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.472561e-02	ci left: 3.297201e-01	ci right 3.483737e-01	k: 3390	n:10000
Cons ci ratio: 8.898945e-02	ci left: 1.552204e-01	ci right 1.697768e-01	k: 1624	n:10000
KS ci ratio: 6.485020e-02	ci left: 2.588428e-01	ci right 2.762928e-01	k: 2675	n:10000
GGT1   10000 perm   2 sec   (6137 perm/sec)   p_kst 2.675000e-01   p_cons 1.624000e-01   p_joint 3.390000e-01

Outputting figure to mutsig2_images.part000000000070/GGT1.2_1758_10000_0.2675_0.1624_0.339.png
                gene_name: GGT1
               theta_stop: 0.089 
                    nperm: 10000 
                     p_ks: 0.27 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.28 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.34 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.35 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000070
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 70 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1708>
Subject: Job 8704216: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1708>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000071> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 22:28:31 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000071.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000071.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 71  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000071.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10690.09 sec.
    Max Memory :      5772 MB
    Max Swap   :      8501 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
71
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 71
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 71: processing genes 6334 - 6423
Calculating significance of each gene.
Using projection method.
6334	GJB2	1
6335	GJB3	1
6336	GJB4	1
6337	GJB5	1
6338	GJB6	1
6339	GJB7	1
6340	GJC1	1
6341	GJC2	1
6342	GJC3	1
6343	GJD2	1
6344	GJD4	1
6345	GK	1
6346	GK2	1
6347	GK5	1
6348	GKAP1	1
6349	GKN1	1
6350	GKN2	1
6351	GLA	1
6352	GLB1	1
6353	GLB1L	2.472803e-01
6354	GLB1L2	1
6355	GLB1L3	1
6356	GLCCI1	1
6357	GLCE	1
6358	GLDC	1
6359	GLDN	1
6360	GLE1	1
6361	GLG1	2.009171e-01
6362	GLI1	1
6363	GLI2	1.869216e-02
6364	GLI3	1
6365	GLI4	1
6366	GLIPR1	1
6367	GLIPR1L1	1
6368	GLIPR1L2	1
6369	GLIPR2	1
6370	GLIS1	1
6371	GLIS2	1
6372	GLIS3	1
6373	GLMN	1
6374	GLO1	1
6375	GLOD4	3.553245e-02
6376	GLOD5	1
6377	GLP1R	1
6378	GLP2R	2.925267e-02
6379	GLRA1	1
6380	GLRA2	1
6381	GLRA3	1
6382	GLRA4	1
6383	GLRB	1
6384	GLRX	1
6385	GLRX2	1
6386	GLRX3	1
6387	GLRX5	1
6388	GLS	1
6389	GLS2	1
6390	GLT1D1	1
6391	GLT25D1	1
6392	GLT25D2	1
6393	GLT6D1	1
6394	GLT8D1	1
6395	GLT8D2	1
6396	GLTP	1
6397	GLTPD1	1
6398	GLTPD2	1
6399	GLTSCR1	1
6400	GLTSCR2	1
6401	GLUD1	1
6402	GLUD2	1
6403	GLUL	1
6404	GLYAT	1
6405	GLYATL1	1
6406	GLYATL2	1
6407	GLYCTK	1
6408	GLYR1	1
6409	GM2A	1
6410	GMCL1	1
6411	GMDS	1.465824e-01
6412	GMEB1	1
6413	GMEB2	1
6414	GMFB	1
6415	GMFG	1
6416	GMIP	1.558868e-01
6417	GML	1
6418	GMNN	1
6419	GMPPA	1
6420	GMPPB	1
6421	GMPR	1
6422	GMPR2	1
6423	GMPS	6.990985e-02
Done

Running MutSig 2:
Scatter job 71: processing genes 6334 - 6423
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
GLI2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.045244e-01	ci left: 4.494298e-03	ci right 7.604055e-03	k: 59	n:10000
Cons ci ratio: 1.752551e+00	ci left: 1.089969e-04	ci right 1.023839e-03	k: 4	n:10000
KS ci ratio: 4.194744e-02	ci left: 4.562838e-01	ci right 4.759360e-01	k: 4661	n:10000
GLI2   10000 perm   2 sec   (4675 perm/sec)   p_kst 4.661000e-01   p_cons 4.000000e-04   p_joint 5.900000e-03

Joint ci ratio: 5.836868e-01	ci left: 1.598964e-03	ci right 2.952284e-03	k: 44	n:20000
Cons ci ratio: 1.752814e+00	ci left: 5.449587e-05	ci right 5.119995e-04	k: 4	n:20000
KS ci ratio: 2.876449e-02	ci left: 4.745034e-01	ci right 4.884020e-01	k: 9629	n:20000
GLI2   20000 perm   7 sec   (3023 perm/sec)   p_kst 4.814500e-01   p_cons 2.000000e-04   p_joint 2.200000e-03

Joint ci ratio: 3.800645e-01	ci left: 2.863519e-03	ci right 4.235401e-03	k: 105	n:30000
Cons ci ratio: 1.600147e+00	ci left: 5.411836e-05	ci right 3.889012e-04	k: 5	n:30000
KS ci ratio: 2.335620e-02	ci left: 4.785633e-01	ci right 4.899064e-01	k: 14527	n:30000
GLI2   30000 perm   9 sec   (3240 perm/sec)   p_kst 4.842333e-01   p_cons 1.666667e-04   p_joint 3.500000e-03

Joint ci ratio: 2.189445e-01	ci left: 7.079431e-03	ci right 8.843125e-03	k: 317	n:40000
Cons ci ratio: 1.239442e+00	ci left: 1.028893e-04	ci right 4.270769e-04	k: 9	n:40000
KS ci ratio: 2.014483e-02	ci left: 4.813656e-01	ci right 4.911864e-01	k: 19451	n:40000
GLI2   40000 perm   12 sec   (3378 perm/sec)   p_kst 4.862750e-01   p_cons 2.250000e-04   p_joint 7.925000e-03

Joint ci ratio: 6.046090e-01	ci left: 5.885084e-04	ci right 1.112260e-03	k: 41	n:50000
Cons ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
KS ci ratio: 1.803031e-02	ci left: 4.815500e-01	ci right 4.903316e-01	k: 24297	n:50000
GLI2   50000 perm   14 sec   (3461 perm/sec)   p_kst 4.859400e-01   p_cons 2.000000e-05   p_joint 8.200000e-04

Joint ci ratio: 6.046524e-01	ci left: 4.904150e-04	ci right 9.269059e-04	k: 41	n:60000
Cons ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
KS ci ratio: 1.642729e-02	ci left: 4.829097e-01	ci right 4.909249e-01	k: 29215	n:60000
GLI2   60000 perm   17 sec   (3504 perm/sec)   p_kst 4.869167e-01   p_cons 1.666667e-05   p_joint 6.833333e-04

Joint ci ratio: 6.822187e-01	ci left: 3.127057e-04	ci right 6.452886e-04	k: 32	n:70000
Cons ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
KS ci ratio: 1.524541e-02	ci left: 4.820053e-01	ci right 4.894244e-01	k: 34000	n:70000
GLI2   70000 perm   20 sec   (3521 perm/sec)   p_kst 4.857143e-01   p_cons 1.428571e-05   p_joint 4.571429e-04

Joint ci ratio: 8.000416e-01	ci left: 1.822588e-04	ci right 4.313601e-04	k: 23	n:80000
Cons ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
KS ci ratio: 1.430053e-02	ci left: 4.808563e-01	ci right 4.877948e-01	k: 38746	n:80000
GLI2   80000 perm   23 sec   (3523 perm/sec)   p_kst 4.843250e-01   p_cons 1.250000e-05   p_joint 2.875000e-04

Joint ci ratio: 9.799074e-01	ci left: 9.328497e-05	ci right 2.748764e-04	k: 15	n:90000
Cons ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
KS ci ratio: 1.347678e-02	ci left: 4.812744e-01	ci right 4.878155e-01	k: 43609	n:90000
GLI2   90000 perm   26 sec   (3510 perm/sec)   p_kst 4.845444e-01   p_cons 1.111111e-05   p_joint 1.666667e-04

Joint ci ratio: 9.506541e-01	ci left: 9.145650e-05	ci right 2.598170e-04	k: 16	n:100000
Cons ci ratio: 2.263168e+00	ci left: 2.422102e-06	ci right 7.224499e-05	k: 2	n:100000
KS ci ratio: 1.277561e-02	ci left: 4.818179e-01	ci right 4.880230e-01	k: 48492	n:100000
GLI2   100000 perm   29 sec   (3490 perm/sec)   p_kst 4.849200e-01   p_cons 2.000000e-05   p_joint 1.600000e-04

Joint ci ratio: 1.181860e+00	ci left: 4.359528e-05	ci right 1.671787e-04	k: 10	n:110000
Cons ci ratio: 2.263172e+00	ci left: 2.201910e-06	ci right 6.567742e-05	k: 2	n:110000
KS ci ratio: 1.218822e-02	ci left: 4.816698e-01	ci right 4.875856e-01	k: 53309	n:110000
GLI2   110000 perm   32 sec   (3464 perm/sec)   p_kst 4.846273e-01   p_cons 1.818182e-05   p_joint 9.090909e-05

Joint ci ratio: 1.600287e+00	ci left: 1.352919e-05	ci right 9.723340e-05	k: 5	n:120000
Cons ci ratio: 2.263175e+00	ci left: 2.018417e-06	ci right 6.020442e-05	k: 2	n:120000
KS ci ratio: 1.165345e-02	ci left: 4.824768e-01	ci right 4.881406e-01	k: 58237	n:120000
GLI2   120000 perm   35 sec   (3434 perm/sec)   p_kst 4.853083e-01   p_cons 1.666667e-05   p_joint 4.166667e-05

Joint ci ratio: 1.600290e+00	ci left: 1.248847e-05	ci right 8.975410e-05	k: 5	n:130000
Cons ci ratio: 2.263178e+00	ci left: 1.863154e-06	ci right 5.557340e-05	k: 2	n:130000
KS ci ratio: 1.119750e-02	ci left: 4.825336e-01	ci right 4.879748e-01	k: 63083	n:130000
GLI2   130000 perm   38 sec   (3403 perm/sec)   p_kst 4.852538e-01   p_cons 1.538462e-05   p_joint 3.846154e-05

Joint ci ratio: 1.012082e+00	ci left: 5.467197e-05	ci right 1.677773e-04	k: 14	n:140000
Cons ci ratio: 2.263181e+00	ci left: 1.730071e-06	ci right 5.160395e-05	k: 2	n:140000
KS ci ratio: 1.080309e-02	ci left: 4.820360e-01	ci right 4.872789e-01	k: 67852	n:140000
GLI2   140000 perm   42 sec   (3373 perm/sec)   p_kst 4.846571e-01   p_cons 1.428571e-05   p_joint 1.000000e-04

Joint ci ratio: 1.012086e+00	ci left: 5.102711e-05	ci right 1.565925e-04	k: 14	n:150000
Cons ci ratio: 2.263183e+00	ci left: 1.614733e-06	ci right 4.816375e-05	k: 2	n:150000
KS ci ratio: 1.043436e-02	ci left: 4.822412e-01	ci right 4.873061e-01	k: 72716	n:150000
GLI2   150000 perm   45 sec   (3332 perm/sec)   p_kst 4.847733e-01   p_cons 1.333333e-05   p_joint 9.333333e-05

Joint ci ratio: 1.087165e+00	ci left: 3.875418e-05	ci right 1.310062e-04	k: 12	n:160000
Cons ci ratio: 2.263185e+00	ci left: 1.513812e-06	ci right 4.515356e-05	k: 2	n:160000
KS ci ratio: 1.010173e-02	ci left: 4.823858e-01	ci right 4.872897e-01	k: 77574	n:160000
GLI2   160000 perm   48 sec   (3301 perm/sec)   p_kst 4.848375e-01   p_cons 1.250000e-05   p_joint 7.500000e-05

Joint ci ratio: 1.131563e+00	ci left: 3.230137e-05	ci right 1.157737e-04	k: 11	n:170000
Cons ci ratio: 2.263186e+00	ci left: 1.424764e-06	ci right 4.249751e-05	k: 2	n:170000
KS ci ratio: 9.796131e-03	ci left: 4.826628e-01	ci right 4.874201e-01	k: 82457	n:170000
GLI2   170000 perm   53 sec   (3226 perm/sec)   p_kst 4.850412e-01   p_cons 1.176471e-05   p_joint 6.470588e-05

Joint ci ratio: 1.306630e+00	ci left: 1.918815e-05	ci right 8.757138e-05	k: 8	n:180000
Cons ci ratio: 2.263188e+00	ci left: 1.345610e-06	ci right 4.013657e-05	k: 2	n:180000
KS ci ratio: 9.524094e-03	ci left: 4.825220e-01	ci right 4.871451e-01	k: 87270	n:180000
GLI2   180000 perm   56 sec   (3194 perm/sec)   p_kst 4.848333e-01   p_cons 1.111111e-05   p_joint 4.444444e-05

Joint ci ratio: 1.306632e+00	ci left: 1.817823e-05	ci right 8.296246e-05	k: 8	n:190000
Cons ci ratio: 2.263189e+00	ci left: 1.274788e-06	ci right 3.802415e-05	k: 2	n:190000
KS ci ratio: 9.269328e-03	ci left: 4.826241e-01	ci right 4.871237e-01	k: 92126	n:190000
GLI2   190000 perm   60 sec   (3163 perm/sec)   p_kst 4.848737e-01   p_cons 1.052632e-05   p_joint 4.210526e-05

Joint ci ratio: 1.306634e+00	ci left: 1.726931e-05	ci right 7.881442e-05	k: 8	n:200000
Cons ci ratio: 2.263190e+00	ci left: 1.211049e-06	ci right 3.612297e-05	k: 2	n:200000
KS ci ratio: 9.025746e-03	ci left: 4.831724e-01	ci right 4.875581e-01	k: 97073	n:200000
GLI2   200000 perm   64 sec   (3133 perm/sec)   p_kst 4.853650e-01   p_cons 1.000000e-05   p_joint 4.000000e-05

Joint ci ratio: 1.306636e+00	ci left: 1.644696e-05	ci right 7.506142e-05	k: 8	n:210000
Cons ci ratio: 2.263192e+00	ci left: 1.153380e-06	ci right 3.440285e-05	k: 2	n:210000
KS ci ratio: 8.806185e-03	ci left: 4.833412e-01	ci right 4.876211e-01	k: 101951	n:210000
GLI2   210000 perm   68 sec   (3100 perm/sec)   p_kst 4.854810e-01   p_cons 9.523810e-06   p_joint 3.809524e-05

Joint ci ratio: 1.131573e+00	ci left: 2.496008e-05	ci right 8.946205e-05	k: 11	n:220000
Cons ci ratio: 2.263192e+00	ci left: 1.100953e-06	ci right 3.283910e-05	k: 2	n:220000
KS ci ratio: 8.609500e-03	ci left: 4.830550e-01	ci right 4.872363e-01	k: 106732	n:220000
GLI2   220000 perm   72 sec   (3067 perm/sec)   p_kst 4.851455e-01   p_cons 9.090909e-06   p_joint 5.000000e-05

Joint ci ratio: 1.131575e+00	ci left: 2.387484e-05	ci right 8.557247e-05	k: 11	n:230000
Cons ci ratio: 2.263193e+00	ci left: 1.053086e-06	ci right 3.141133e-05	k: 2	n:230000
KS ci ratio: 8.421979e-03	ci left: 4.829990e-01	ci right 4.870883e-01	k: 111560	n:230000
GLI2   230000 perm   76 sec   (3035 perm/sec)   p_kst 4.850435e-01   p_cons 8.695652e-06   p_joint 4.782609e-05

Joint ci ratio: 1.131576e+00	ci left: 2.288005e-05	ci right 8.200701e-05	k: 11	n:240000
Cons ci ratio: 2.263194e+00	ci left: 1.009207e-06	ci right 3.010254e-05	k: 2	n:240000
KS ci ratio: 8.231632e-03	ci left: 4.838319e-01	ci right 4.878352e-01	k: 116600	n:240000
GLI2   240000 perm   80 sec   (3003 perm/sec)   p_kst 4.858333e-01   p_cons 8.333333e-06   p_joint 4.583333e-05

Joint ci ratio: 1.087182e+00	ci left: 2.480254e-05	ci right 8.384484e-05	k: 12	n:250000
Cons ci ratio: 2.263195e+00	ci left: 9.688386e-07	ci right 2.889845e-05	k: 2	n:250000
KS ci ratio: 8.059533e-03	ci left: 4.842310e-01	ci right 4.881534e-01	k: 121548	n:250000
GLI2   250000 perm   85 sec   (2925 perm/sec)   p_kst 4.861920e-01   p_cons 8.000000e-06   p_joint 4.800000e-05

Joint ci ratio: 1.087183e+00	ci left: 2.384859e-05	ci right 8.062009e-05	k: 12	n:260000
Cons ci ratio: 2.263196e+00	ci left: 9.315755e-07	ci right 2.778698e-05	k: 2	n:260000
KS ci ratio: 7.907036e-03	ci left: 4.840156e-01	ci right 4.878617e-01	k: 126344	n:260000
GLI2   260000 perm   91 sec   (2853 perm/sec)   p_kst 4.859385e-01   p_cons 7.692308e-06   p_joint 4.615385e-05

Joint ci ratio: 1.087184e+00	ci left: 2.296530e-05	ci right 7.763421e-05	k: 12	n:270000
Cons ci ratio: 2.263196e+00	ci left: 8.970727e-07	ci right 2.675784e-05	k: 2	n:270000
KS ci ratio: 7.762301e-03	ci left: 4.838538e-01	ci right 4.876279e-01	k: 131150	n:270000
GLI2   270000 perm   96 sec   (2810 perm/sec)   p_kst 4.857407e-01   p_cons 7.407407e-06   p_joint 4.444444e-05

Joint ci ratio: 1.181899e+00	ci left: 1.712652e-05	ci right 6.567886e-05	k: 10	n:280000
Cons ci ratio: 2.263197e+00	ci left: 8.650343e-07	ci right 2.580222e-05	k: 2	n:280000
KS ci ratio: 7.624686e-03	ci left: 4.837400e-01	ci right 4.874460e-01	k: 135966	n:280000
GLI2   280000 perm   100 sec   (2786 perm/sec)   p_kst 4.855929e-01   p_cons 7.142857e-06   p_joint 3.571429e-05

Joint ci ratio: 1.131581e+00	ci left: 1.893518e-05	ci right 6.786808e-05	k: 11	n:290000
Cons ci ratio: 2.263197e+00	ci left: 8.352055e-07	ci right 2.491249e-05	k: 2	n:290000
KS ci ratio: 7.497451e-03	ci left: 4.834139e-01	ci right 4.870553e-01	k: 140718	n:290000
GLI2   290000 perm   105 sec   (2762 perm/sec)   p_kst 4.852345e-01   p_cons 6.896552e-06   p_joint 3.793103e-05

Joint ci ratio: 1.131582e+00	ci left: 1.830401e-05	ci right 6.560585e-05	k: 11	n:300000
Cons ci ratio: 2.263198e+00	ci left: 8.073653e-07	ci right 2.408208e-05	k: 2	n:300000
KS ci ratio: 7.372190e-03	ci left: 4.833934e-01	ci right 4.869735e-01	k: 145555	n:300000
GLI2   300000 perm   110 sec   (2739 perm/sec)   p_kst 4.851833e-01   p_cons 6.666667e-06   p_joint 3.666667e-05

Joint ci ratio: 1.087188e+00	ci left: 2.000201e-05	ci right 6.761704e-05	k: 12	n:310000
Cons ci ratio: 2.263198e+00	ci left: 7.813212e-07	ci right 2.330525e-05	k: 2	n:310000
KS ci ratio: 7.250570e-03	ci left: 4.835424e-01	ci right 4.870643e-01	k: 150444	n:310000
GLI2   310000 perm   114 sec   (2715 perm/sec)   p_kst 4.853032e-01   p_cons 6.451613e-06   p_joint 3.870968e-05

Joint ci ratio: 1.047640e+00	ci left: 2.163127e-05	ci right 6.946899e-05	k: 13	n:320000
Cons ci ratio: 2.263199e+00	ci left: 7.569049e-07	ci right 2.257696e-05	k: 2	n:320000
KS ci ratio: 7.135446e-03	ci left: 4.836357e-01	ci right 4.871021e-01	k: 155318	n:320000
GLI2   320000 perm   119 sec   (2692 perm/sec)   p_kst 4.853688e-01   p_cons 6.250000e-06   p_joint 4.062500e-05

Joint ci ratio: 1.012115e+00	ci left: 2.319392e-05	ci right 7.117965e-05	k: 14	n:330000
Cons ci ratio: 2.263199e+00	ci left: 7.339684e-07	ci right 2.189282e-05	k: 2	n:330000
KS ci ratio: 7.024529e-03	ci left: 4.838025e-01	ci right 4.872159e-01	k: 160218	n:330000
GLI2   330000 perm   124 sec   (2671 perm/sec)   p_kst 4.855091e-01   p_cons 6.060606e-06   p_joint 4.242424e-05

Joint ci ratio: 1.012116e+00	ci left: 2.251174e-05	ci right 6.908616e-05	k: 14	n:340000
Cons ci ratio: 2.263200e+00	ci left: 7.123810e-07	ci right 2.124892e-05	k: 2	n:340000
KS ci ratio: 6.919198e-03	ci left: 4.839187e-01	ci right 4.872815e-01	k: 165104	n:340000
GLI2   340000 perm   128 sec   (2650 perm/sec)   p_kst 4.856000e-01   p_cons 5.882353e-06   p_joint 4.117647e-05

Joint ci ratio: 4.899545e-01	ci left: 1.383196e-04	ci right 2.302924e-04	k: 63	n:350000
Cons ci ratio: 1.753062e+00	ci left: 3.113910e-06	ci right 2.926142e-05	k: 4	n:350000
KS ci ratio: 6.818077e-03	ci left: 4.840572e-01	ci right 4.873716e-01	k: 170000	n:350000
GLI2   350000 perm   133 sec   (2627 perm/sec)   p_kst 4.857143e-01   p_cons 1.142857e-05   p_joint 1.800000e-04

Joint ci ratio: 7.040215e-01	ci left: 5.622533e-05	ci right 1.189614e-04	k: 30	n:360000
Cons ci ratio: 1.753063e+00	ci left: 3.027412e-06	ci right 2.844861e-05	k: 4	n:360000
KS ci ratio: 6.722310e-03	ci left: 4.841105e-01	ci right 4.873786e-01	k: 174868	n:360000
GLI2   360000 perm   138 sec   (2605 perm/sec)   p_kst 4.857444e-01   p_cons 1.111111e-05   p_joint 8.333333e-05

Joint ci ratio: 6.823531e-01	ci left: 5.915742e-05	ci right 1.220909e-04	k: 32	n:370000
Cons ci ratio: 1.753063e+00	ci left: 2.945590e-06	ci right 2.767974e-05	k: 4	n:370000
KS ci ratio: 6.633984e-03	ci left: 4.838965e-01	ci right 4.871200e-01	k: 179638	n:370000
GLI2   370000 perm   143 sec   (2584 perm/sec)   p_kst 4.855081e-01   p_cons 1.081081e-05   p_joint 8.648649e-05

Joint ci ratio: 6.358753e-01	ci left: 6.855725e-05	ci right 1.342071e-04	k: 37	n:380000
Cons ci ratio: 1.600319e+00	ci left: 4.272346e-06	ci right 3.070587e-05	k: 5	n:380000
KS ci ratio: 6.548806e-03	ci left: 4.837124e-01	ci right 4.868931e-01	k: 184415	n:380000
GLI2   380000 perm   148 sec   (2563 perm/sec)   p_kst 4.853026e-01   p_cons 1.315789e-05   p_joint 9.736842e-05

Joint ci ratio: 7.156624e-01	ci left: 4.979992e-05	ci right 1.067902e-04	k: 29	n:390000
Cons ci ratio: 1.600319e+00	ci left: 4.162798e-06	ci right 2.991854e-05	k: 5	n:390000
KS ci ratio: 6.463043e-03	ci left: 4.838303e-01	ci right 4.869699e-01	k: 189306	n:390000
GLI2   390000 perm   153 sec   (2542 perm/sec)   p_kst 4.854000e-01   p_cons 1.282051e-05   p_joint 7.435897e-05

Joint ci ratio: 6.929361e-01	ci left: 5.265808e-05	ci right 1.100033e-04	k: 31	n:400000
Cons ci ratio: 1.600319e+00	ci left: 4.058728e-06	ci right 2.917059e-05	k: 5	n:400000
KS ci ratio: 6.382511e-03	ci left: 4.837900e-01	ci right 4.868902e-01	k: 194136	n:400000
GLI2   400000 perm   159 sec   (2523 perm/sec)   p_kst 4.853400e-01   p_cons 1.250000e-05   p_joint 7.750000e-05

Joint ci ratio: 6.929368e-01	ci left: 5.137372e-05	ci right 1.073203e-04	k: 31	n:410000
Cons ci ratio: 1.600320e+00	ci left: 3.959734e-06	ci right 2.845912e-05	k: 5	n:410000
KS ci ratio: 6.302607e-03	ci left: 4.839349e-01	ci right 4.869970e-01	k: 199041	n:410000
GLI2   410000 perm   164 sec   (2502 perm/sec)   p_kst 4.854659e-01   p_cons 1.219512e-05   p_joint 7.560976e-05

Joint ci ratio: 6.823568e-01	ci left: 5.211479e-05	ci right 1.075565e-04	k: 32	n:420000
Cons ci ratio: 1.481607e+00	ci left: 5.242623e-06	ci right 3.109372e-05	k: 6	n:420000
KS ci ratio: 6.224029e-03	ci left: 4.842017e-01	ci right 4.872271e-01	k: 204000	n:420000
GLI2   420000 perm   169 sec   (2483 perm/sec)   p_kst 4.857143e-01   p_cons 1.428571e-05   p_joint 7.619048e-05

Joint ci ratio: 6.823574e-01	ci left: 5.090281e-05	ci right 1.050553e-04	k: 32	n:430000
Cons ci ratio: 1.481607e+00	ci left: 5.120701e-06	ci right 3.037062e-05	k: 6	n:430000
KS ci ratio: 6.149432e-03	ci left: 4.843655e-01	ci right 4.873556e-01	k: 208920	n:430000
GLI2   430000 perm   175 sec   (2464 perm/sec)   p_kst 4.858605e-01   p_cons 1.395349e-05   p_joint 7.441860e-05

Joint ci ratio: 6.625738e-01	ci left: 5.351418e-05	ci right 1.079792e-04	k: 34	n:440000
Cons ci ratio: 1.385915e+00	ci left: 6.396303e-06	ci right 3.277853e-05	k: 7	n:440000
KS ci ratio: 6.081048e-03	ci left: 4.842267e-01	ci right 4.871825e-01	k: 213710	n:440000
GLI2   440000 perm   180 sec   (2444 perm/sec)   p_kst 4.857045e-01   p_cons 1.590909e-05   p_joint 7.727273e-05

Joint ci ratio: 6.533065e-01	ci left: 5.417565e-05	ci right 1.081684e-04	k: 35	n:450000
Cons ci ratio: 1.385915e+00	ci left: 6.254162e-06	ci right 3.205013e-05	k: 7	n:450000
KS ci ratio: 6.013745e-03	ci left: 4.841898e-01	ci right 4.871126e-01	k: 218543	n:450000
GLI2   450000 perm   186 sec   (2425 perm/sec)   p_kst 4.856511e-01   p_cons 1.555556e-05   p_joint 7.777778e-05

Joint ci ratio: 6.358810e-01	ci left: 5.663412e-05	ci right 1.108671e-04	k: 37	n:460000
Cons ci ratio: 1.306652e+00	ci left: 7.508360e-06	ci right 3.426751e-05	k: 8	n:460000
KS ci ratio: 5.947619e-03	ci left: 4.842395e-01	ci right 4.871303e-01	k: 223415	n:460000
GLI2   460000 perm   191 sec   (2406 perm/sec)   p_kst 4.856848e-01   p_cons 1.739130e-05   p_joint 8.043478e-05

Joint ci ratio: 6.358816e-01	ci left: 5.542913e-05	ci right 1.085082e-04	k: 37	n:470000
Cons ci ratio: 1.306653e+00	ci left: 7.348607e-06	ci right 3.353842e-05	k: 8	n:470000
KS ci ratio: 5.883451e-03	ci left: 4.843021e-01	ci right 4.871619e-01	k: 228294	n:470000
GLI2   470000 perm   197 sec   (2387 perm/sec)   p_kst 4.857319e-01   p_cons 1.702128e-05   p_joint 7.872340e-05

Joint ci ratio: 6.276762e-01	ci left: 5.602364e-05	ci right 1.086608e-04	k: 38	n:480000
Cons ci ratio: 1.306653e+00	ci left: 7.195510e-06	ci right 3.283971e-05	k: 8	n:480000
KS ci ratio: 5.822531e-03	ci left: 4.842581e-01	ci right 4.870879e-01	k: 233123	n:480000
GLI2   480000 perm   203 sec   (2369 perm/sec)   p_kst 4.856729e-01   p_cons 1.666667e-05   p_joint 7.916667e-05

Joint ci ratio: 6.276767e-01	ci left: 5.488028e-05	ci right 1.064433e-04	k: 38	n:490000
Cons ci ratio: 1.306653e+00	ci left: 7.048663e-06	ci right 3.216952e-05	k: 8	n:490000
KS ci ratio: 5.761958e-03	ci left: 4.843466e-01	ci right 4.871474e-01	k: 238016	n:490000
GLI2   490000 perm   208 sec   (2350 perm/sec)   p_kst 4.857469e-01   p_cons 1.632653e-05   p_joint 7.755102e-05

Joint ci ratio: 6.276773e-01	ci left: 5.378267e-05	ci right 1.043145e-04	k: 38	n:500000
Cons ci ratio: 1.306654e+00	ci left: 6.907689e-06	ci right 3.152613e-05	k: 8	n:500000
KS ci ratio: 5.706708e-03	ci left: 4.841278e-01	ci right 4.869004e-01	k: 242757	n:500000
GLI2   500000 perm   214 sec   (2332 perm/sec)   p_kst 4.855140e-01   p_cons 1.600000e-05   p_joint 7.600000e-05

Joint ci ratio: 6.276777e-01	ci left: 5.272809e-05	ci right 1.022691e-04	k: 38	n:510000
Cons ci ratio: 1.306654e+00	ci left: 6.772244e-06	ci right 3.090798e-05	k: 8	n:510000
KS ci ratio: 5.650442e-03	ci left: 4.841451e-01	ci right 4.868904e-01	k: 247614	n:510000
GLI2   510000 perm   220 sec   (2315 perm/sec)   p_kst 4.855176e-01   p_cons 1.568627e-05   p_joint 7.450980e-05

Joint ci ratio: 7.407897e-01	ci left: 3.421790e-05	ci right 7.554446e-05	k: 27	n:520000
Cons ci ratio: 1.239600e+00	ci left: 7.914209e-06	ci right 3.285514e-05	k: 9	n:520000
KS ci ratio: 5.596152e-03	ci left: 4.841311e-01	ci right 4.868498e-01	k: 252455	n:520000
GLI2   520000 perm   226 sec   (2297 perm/sec)   p_kst 4.854904e-01   p_cons 1.730769e-05   p_joint 5.192308e-05

Joint ci ratio: 7.407901e-01	ci left: 3.357228e-05	ci right 7.411911e-05	k: 27	n:530000
Cons ci ratio: 1.239600e+00	ci left: 7.764883e-06	ci right 3.223523e-05	k: 9	n:530000
KS ci ratio: 5.542603e-03	ci left: 4.841894e-01	ci right 4.868824e-01	k: 257334	n:530000
GLI2   530000 perm   232 sec   (2280 perm/sec)   p_kst 4.855358e-01   p_cons 1.698113e-05   p_joint 5.094340e-05

Joint ci ratio: 7.407905e-01	ci left: 3.295057e-05	ci right 7.274655e-05	k: 27	n:540000
Cons ci ratio: 1.239600e+00	ci left: 7.621089e-06	ci right 3.163829e-05	k: 9	n:540000
KS ci ratio: 5.494125e-03	ci left: 4.839217e-01	ci right 4.865896e-01	k: 262038	n:540000
GLI2   540000 perm   239 sec   (2262 perm/sec)   p_kst 4.852556e-01   p_cons 1.666667e-05   p_joint 5.000000e-05

Joint ci ratio: 7.407908e-01	ci left: 3.235146e-05	ci right 7.142390e-05	k: 27	n:550000
Cons ci ratio: 1.239600e+00	ci left: 7.482523e-06	ci right 3.106305e-05	k: 9	n:550000
KS ci ratio: 5.444792e-03	ci left: 4.838565e-01	ci right 4.865000e-01	k: 266848	n:550000
GLI2   550000 perm   245 sec   (2246 perm/sec)   p_kst 4.851782e-01   p_cons 1.636364e-05   p_joint 4.909091e-05

Joint ci ratio: 9.507244e-01	ci left: 1.633113e-05	ci right 4.639780e-05	k: 16	n:560000
Cons ci ratio: 1.239601e+00	ci left: 7.348906e-06	ci right 3.050836e-05	k: 9	n:560000
KS ci ratio: 5.397113e-03	ci left: 4.837616e-01	ci right 4.863814e-01	k: 271640	n:560000
GLI2   560000 perm   251 sec   (2229 perm/sec)   p_kst 4.850714e-01   p_cons 1.607143e-05   p_joint 2.857143e-05

Joint ci ratio: 9.507246e-01	ci left: 1.604461e-05	ci right 4.558381e-05	k: 16	n:570000
Cons ci ratio: 1.239601e+00	ci left: 7.219977e-06	ci right 2.997313e-05	k: 9	n:570000
KS ci ratio: 5.351039e-03	ci left: 4.836351e-01	ci right 4.862317e-01	k: 276412	n:570000
GLI2   570000 perm   258 sec   (2212 perm/sec)   p_kst 4.849333e-01   p_cons 1.578947e-05   p_joint 2.807018e-05

Joint ci ratio: 9.507249e-01	ci left: 1.576798e-05	ci right 4.479789e-05	k: 16	n:580000
Cons ci ratio: 1.239601e+00	ci left: 7.095495e-06	ci right 2.945635e-05	k: 9	n:580000
KS ci ratio: 5.303800e-03	ci left: 4.837320e-01	ci right 4.863061e-01	k: 281311	n:580000
GLI2   580000 perm   264 sec   (2195 perm/sec)   p_kst 4.850190e-01   p_cons 1.551724e-05   p_joint 2.758621e-05

Joint ci ratio: 9.507251e-01	ci left: 1.550073e-05	ci right 4.403861e-05	k: 16	n:590000
Cons ci ratio: 1.239601e+00	ci left: 6.975232e-06	ci right 2.895710e-05	k: 9	n:590000
KS ci ratio: 5.259235e-03	ci left: 4.836884e-01	ci right 4.862406e-01	k: 286129	n:590000
GLI2   590000 perm   271 sec   (2179 perm/sec)   p_kst 4.849644e-01   p_cons 1.525424e-05   p_joint 2.711864e-05

Joint ci ratio: 9.799861e-01	ci left: 1.399238e-05	ci right 4.123336e-05	k: 15	n:600000
Cons ci ratio: 1.239601e+00	ci left: 6.858977e-06	ci right 2.847448e-05	k: 9	n:600000
KS ci ratio: 5.224693e-03	ci left: 4.827931e-01	ci right 4.853237e-01	k: 290435	n:600000
GLI2   600000 perm   277 sec   (2163 perm/sec)   p_kst 4.840583e-01   p_cons 1.500000e-05   p_joint 2.500000e-05

Joint ci ratio: 9.799863e-01	ci left: 1.376299e-05	ci right 4.055741e-05	k: 15	n:610000
Cons ci ratio: 1.239602e+00	ci left: 6.746535e-06	ci right 2.800769e-05	k: 9	n:610000
KS ci ratio: 5.181735e-03	ci left: 4.827993e-01	ci right 4.853091e-01	k: 295273	n:610000
GLI2   610000 perm   284 sec   (2147 perm/sec)   p_kst 4.840541e-01   p_cons 1.475410e-05   p_joint 2.459016e-05

Joint ci ratio: 9.799866e-01	ci left: 1.354101e-05	ci right 3.990327e-05	k: 15	n:620000
Cons ci ratio: 1.239602e+00	ci left: 6.637719e-06	ci right 2.755595e-05	k: 9	n:620000
KS ci ratio: 5.139819e-03	ci left: 4.828053e-01	ci right 4.852948e-01	k: 300111	n:620000
GLI2   620000 perm   291 sec   (2127 perm/sec)   p_kst 4.840500e-01   p_cons 1.451613e-05   p_joint 2.419355e-05

Joint ci ratio: 9.507261e-01	ci left: 1.451655e-05	ci right 4.124253e-05	k: 16	n:630000
Cons ci ratio: 1.239602e+00	ci left: 6.532358e-06	ci right 2.711856e-05	k: 9	n:630000
KS ci ratio: 5.098175e-03	ci left: 4.828827e-01	ci right 4.853524e-01	k: 304994	n:630000
GLI2   630000 perm   298 sec   (2112 perm/sec)   p_kst 4.841175e-01   p_cons 1.428571e-05   p_joint 2.539683e-05

Joint ci ratio: 9.507263e-01	ci left: 1.428973e-05	ci right 4.059812e-05	k: 16	n:640000
Cons ci ratio: 1.239602e+00	ci left: 6.430290e-06	ci right 2.669484e-05	k: 9	n:640000
KS ci ratio: 5.057116e-03	ci left: 4.829984e-01	ci right 4.854487e-01	k: 309903	n:640000
GLI2   640000 perm   305 sec   (2096 perm/sec)   p_kst 4.842234e-01   p_cons 1.406250e-05   p_joint 2.500000e-05

Joint ci ratio: 9.507265e-01	ci left: 1.406988e-05	ci right 3.997354e-05	k: 16	n:650000
Cons ci ratio: 1.239602e+00	ci left: 6.331362e-06	ci right 2.628415e-05	k: 9	n:650000
KS ci ratio: 5.017280e-03	ci left: 4.830859e-01	ci right 4.855173e-01	k: 314796	n:650000
GLI2   650000 perm   312 sec   (2082 perm/sec)   p_kst 4.843015e-01   p_cons 1.384615e-05   p_joint 2.461538e-05

Joint ci ratio: 9.507267e-01	ci left: 1.385670e-05	ci right 3.936788e-05	k: 16	n:660000
Cons ci ratio: 1.239603e+00	ci left: 6.235432e-06	ci right 2.588591e-05	k: 9	n:660000
KS ci ratio: 4.978446e-03	ci left: 4.831633e-01	ci right 4.855762e-01	k: 319684	n:660000
GLI2   660000 perm   319 sec   (2067 perm/sec)   p_kst 4.843697e-01   p_cons 1.363636e-05   p_joint 2.424242e-05

Joint ci ratio: 9.239398e-01	ci left: 1.478085e-05	ci right 4.062454e-05	k: 17	n:670000
Cons ci ratio: 1.181914e+00	ci left: 7.157319e-06	ci right 2.744812e-05	k: 10	n:670000
KS ci ratio: 4.940766e-03	ci left: 4.832116e-01	ci right 4.856064e-01	k: 324554	n:670000
GLI2   670000 perm   326 sec   (2052 perm/sec)   p_kst 4.844090e-01   p_cons 1.492537e-05   p_joint 2.537313e-05

Joint ci ratio: 9.239400e-01	ci left: 1.456349e-05	ci right 4.002712e-05	k: 17	n:680000
Cons ci ratio: 1.181914e+00	ci left: 7.052064e-06	ci right 2.704447e-05	k: 10	n:680000
KS ci ratio: 4.904462e-03	ci left: 4.832042e-01	ci right 4.855813e-01	k: 329387	n:680000
GLI2   680000 perm   334 sec   (2038 perm/sec)   p_kst 4.843926e-01   p_cons 1.470588e-05   p_joint 2.500000e-05

Joint ci ratio: 9.239401e-01	ci left: 1.435242e-05	ci right 3.944702e-05	k: 17	n:690000
Cons ci ratio: 1.181914e+00	ci left: 6.949860e-06	ci right 2.665253e-05	k: 10	n:690000
KS ci ratio: 4.869230e-03	ci left: 4.831680e-01	ci right 4.855278e-01	k: 334200	n:690000
GLI2   690000 perm   341 sec   (2024 perm/sec)   p_kst 4.843478e-01   p_cons 1.449275e-05   p_joint 2.463768e-05

Joint ci ratio: 8.992968e-01	ci left: 1.523998e-05	ci right 4.063935e-05	k: 18	n:700000
Cons ci ratio: 1.131596e+00	ci left: 7.844540e-06	ci right 2.811702e-05	k: 11	n:700000
KS ci ratio: 4.832866e-03	ci left: 4.833272e-01	ci right 4.856701e-01	k: 339149	n:700000
GLI2   700000 perm   348 sec   (2009 perm/sec)   p_kst 4.844986e-01   p_cons 1.571429e-05   p_joint 2.571429e-05

Joint ci ratio: 8.992970e-01	ci left: 1.502534e-05	ci right 4.006697e-05	k: 18	n:710000
Cons ci ratio: 1.131596e+00	ci left: 7.734053e-06	ci right 2.772101e-05	k: 11	n:710000
KS ci ratio: 4.799036e-03	ci left: 4.833017e-01	ci right 4.856280e-01	k: 343970	n:710000
GLI2   710000 perm   356 sec   (1995 perm/sec)   p_kst 4.844648e-01   p_cons 1.549296e-05   p_joint 2.535211e-05

Joint ci ratio: 8.765259e-01	ci left: 1.588791e-05	ci right 4.120921e-05	k: 19	n:720000
Cons ci ratio: 1.087202e+00	ci left: 8.611939e-06	ci right 2.911313e-05	k: 12	n:720000
KS ci ratio: 4.766131e-03	ci left: 4.832533e-01	ci right 4.855634e-01	k: 348774	n:720000
GLI2   720000 perm   364 sec   (1980 perm/sec)   p_kst 4.844083e-01   p_cons 1.666667e-05   p_joint 2.638889e-05

Joint ci ratio: 8.765260e-01	ci left: 1.567026e-05	ci right 4.064471e-05	k: 19	n:730000
Cons ci ratio: 1.087202e+00	ci left: 8.493966e-06	ci right 2.871432e-05	k: 12	n:730000
KS ci ratio: 4.732830e-03	ci left: 4.833187e-01	ci right 4.856129e-01	k: 353660	n:730000
GLI2   730000 perm   371 sec   (1965 perm/sec)   p_kst 4.844658e-01   p_cons 1.643836e-05   p_joint 2.602740e-05

Joint ci ratio: 8.765262e-01	ci left: 1.545850e-05	ci right 4.009546e-05	k: 19	n:740000
Cons ci ratio: 1.087202e+00	ci left: 8.379183e-06	ci right 2.832629e-05	k: 12	n:740000
KS ci ratio: 4.700294e-03	ci left: 4.833742e-01	ci right 4.856529e-01	k: 358540	n:740000
GLI2   740000 perm   379 sec   (1951 perm/sec)   p_kst 4.845135e-01   p_cons 1.621622e-05   p_joint 2.567568e-05

Joint ci ratio: 8.554016e-01	ci left: 1.628877e-05	ci right 4.118420e-05	k: 20	n:750000
Cons ci ratio: 1.087202e+00	ci left: 8.267460e-06	ci right 2.794861e-05	k: 12	n:750000
KS ci ratio: 4.668955e-03	ci left: 4.833710e-01	ci right 4.856344e-01	k: 363377	n:750000
GLI2   750000 perm   387 sec   (1936 perm/sec)   p_kst 4.845027e-01   p_cons 1.600000e-05   p_joint 2.666667e-05

Joint ci ratio: 8.554017e-01	ci left: 1.607444e-05	ci right 4.064231e-05	k: 20	n:760000
Cons ci ratio: 1.087202e+00	ci left: 8.158677e-06	ci right 2.758087e-05	k: 12	n:760000
KS ci ratio: 4.638332e-03	ci left: 4.833574e-01	ci right 4.856059e-01	k: 368206	n:760000
GLI2   760000 perm   396 sec   (1921 perm/sec)   p_kst 4.844816e-01   p_cons 1.578947e-05   p_joint 2.631579e-05

Joint ci ratio: 8.554019e-01	ci left: 1.586568e-05	ci right 4.011449e-05	k: 20	n:770000
Cons ci ratio: 1.087203e+00	ci left: 8.052720e-06	ci right 2.722268e-05	k: 12	n:770000
KS ci ratio: 4.607693e-03	ci left: 4.834104e-01	ci right 4.856442e-01	k: 373086	n:770000
GLI2   770000 perm   404 sec   (1907 perm/sec)   p_kst 4.845273e-01   p_cons 1.558442e-05   p_joint 2.597403e-05

Joint ci ratio: 2.301474e-01	ci left: 3.290292e-04	ci right 4.157775e-04	k: 289	n:780000
Cons ci ratio: 3.042184e-01	ci left: 1.804949e-04	ci right 2.463877e-04	k: 165	n:780000
KS ci ratio: 4.578676e-03	ci left: 4.833506e-01	ci right 4.855700e-01	k: 377879	n:780000
GLI2   780000 perm   412 sec   (1893 perm/sec)   p_kst 4.844603e-01   p_cons 2.115385e-04   p_joint 3.705128e-04

Joint ci ratio: 2.281885e-01	ci left: 3.308301e-04	ci right 4.172063e-04	k: 294	n:790000
Cons ci ratio: 3.033065e-01	ci left: 1.793795e-04	ci right 2.446309e-04	k: 166	n:790000
KS ci ratio: 4.550246e-03	ci left: 4.832873e-01	ci right 4.854926e-01	k: 382668	n:790000
GLI2   790000 perm   420 sec   (1879 perm/sec)   p_kst 4.843899e-01   p_cons 2.101266e-04   p_joint 3.721519e-04

Joint ci ratio: 2.317529e-01	ci left: 3.160925e-04	ci right 4.000947e-04	k: 285	n:800000
Cons ci ratio: 3.006181e-01	ci left: 1.806032e-04	ci right 2.456063e-04	k: 169	n:800000
KS ci ratio: 4.521388e-03	ci left: 4.833306e-01	ci right 4.855221e-01	k: 387541	n:800000
GLI2   800000 perm   429 sec   (1866 perm/sec)   p_kst 4.844263e-01   p_cons 2.112500e-04   p_joint 3.562500e-04

Joint ci ratio: 2.305470e-01	ci left: 3.156794e-04	ci right 3.990730e-04	k: 288	n:810000
Cons ci ratio: 3.006185e-01	ci left: 1.783735e-04	ci right 2.425741e-04	k: 169	n:810000
KS ci ratio: 4.492462e-03	ci left: 4.834407e-01	ci right 4.856186e-01	k: 392469	n:810000
GLI2   810000 perm   437 sec   (1853 perm/sec)   p_kst 4.845296e-01   p_cons 2.086420e-04   p_joint 3.555556e-04

Joint ci ratio: 2.289678e-01	ci left: 3.164269e-04	ci right 3.993646e-04	k: 292	n:820000
Cons ci ratio: 2.988657e-01	ci left: 1.784538e-04	ci right 2.422378e-04	k: 171	n:820000
KS ci ratio: 4.465729e-03	ci left: 4.833641e-01	ci right 4.855287e-01	k: 397246	n:820000
GLI2   820000 perm   446 sec   (1840 perm/sec)   p_kst 4.844463e-01   p_cons 2.085366e-04   p_joint 3.560976e-04

Joint ci ratio: 2.289683e-01	ci left: 3.126145e-04	ci right 3.945531e-04	k: 292	n:830000
Cons ci ratio: 2.971431e-01	ci left: 1.785333e-04	ci right 2.419085e-04	k: 173	n:830000
KS ci ratio: 4.437531e-03	ci left: 4.835074e-01	ci right 4.856589e-01	k: 402204	n:830000
GLI2   830000 perm   454 sec   (1827 perm/sec)   p_kst 4.845831e-01   p_cons 2.084337e-04   p_joint 3.518072e-04

Joint ci ratio: 2.281910e-01	ci left: 3.111375e-04	ci right 3.923731e-04	k: 294	n:840000
Cons ci ratio: 2.946140e-01	ci left: 1.797143e-04	ci right 2.428644e-04	k: 176	n:840000
KS ci ratio: 4.411173e-03	ci left: 4.834986e-01	ci right 4.856372e-01	k: 407037	n:840000
GLI2   840000 perm   463 sec   (1814 perm/sec)   p_kst 4.845679e-01   p_cons 2.095238e-04   p_joint 3.500000e-04

Joint ci ratio: 2.325702e-01	ci left: 2.952824e-04	ci right 3.740707e-04	k: 283	n:850000
Cons ci ratio: 2.929635e-01	ci left: 1.797796e-04	ci right 2.425330e-04	k: 178	n:850000
KS ci ratio: 4.385176e-03	ci left: 4.835017e-01	ci right 4.856278e-01	k: 411880	n:850000
GLI2   850000 perm   472 sec   (1801 perm/sec)   p_kst 4.845647e-01   p_cons 2.094118e-04   p_joint 3.329412e-04

Joint ci ratio: 2.309494e-01	ci left: 2.962300e-04	ci right 3.746417e-04	k: 287	n:860000
Cons ci ratio: 2.929639e-01	ci left: 1.776891e-04	ci right 2.397129e-04	k: 178	n:860000
KS ci ratio: 4.359968e-03	ci left: 4.834665e-01	ci right 4.855801e-01	k: 416690	n:860000
GLI2   860000 perm   481 sec   (1788 perm/sec)   p_kst 4.845233e-01   p_cons 2.069767e-04   p_joint 3.337209e-04

Joint ci ratio: 2.289701e-01	ci left: 2.982411e-04	ci right 3.764131e-04	k: 292	n:870000
Cons ci ratio: 2.921492e-01	ci left: 1.767118e-04	ci right 2.381911e-04	k: 179	n:870000
KS ci ratio: 4.334302e-03	ci left: 4.835344e-01	ci right 4.856358e-01	k: 421589	n:870000
GLI2   870000 perm   490 sec   (1776 perm/sec)   p_kst 4.845851e-01   p_cons 2.057471e-04   p_joint 3.356322e-04

Joint ci ratio: 2.278069e-01	ci left: 2.980661e-04	ci right 3.757395e-04	k: 295	n:880000
Cons ci ratio: 2.913412e-01	ci left: 1.757569e-04	ci right 2.367037e-04	k: 180	n:880000
KS ci ratio: 4.309329e-03	ci left: 4.835724e-01	ci right 4.856618e-01	k: 426463	n:880000
GLI2   880000 perm   499 sec   (1764 perm/sec)   p_kst 4.846170e-01   p_cons 2.045455e-04   p_joint 3.352273e-04

Joint ci ratio: 2.325720e-01	ci left: 2.820110e-04	ci right 3.572588e-04	k: 283	n:890000
Cons ci ratio: 2.905399e-01	ci left: 1.748237e-04	ci right 2.352495e-04	k: 181	n:890000
KS ci ratio: 4.285380e-03	ci left: 4.835399e-01	ci right 4.856175e-01	k: 431275	n:890000
GLI2   890000 perm   508 sec   (1752 perm/sec)   p_kst 4.845787e-01   p_cons 2.033708e-04   p_joint 3.179775e-04

Joint ci ratio: 2.325724e-01	ci left: 2.788775e-04	ci right 3.532894e-04	k: 283	n:900000
Cons ci ratio: 2.897451e-01	ci left: 1.739114e-04	ci right 2.338274e-04	k: 182	n:900000
KS ci ratio: 4.261912e-03	ci left: 4.834981e-01	ci right 4.855642e-01	k: 436078	n:900000
GLI2   900000 perm   517 sec   (1741 perm/sec)   p_kst 4.845311e-01   p_cons 2.022222e-04   p_joint 3.144444e-04

Joint ci ratio: 2.313537e-01	ci left: 2.789181e-04	ci right 3.528950e-04	k: 286	n:910000
Cons ci ratio: 2.873988e-01	ci left: 1.750584e-04	ci right 2.347925e-04	k: 185	n:910000
KS ci ratio: 4.238536e-03	ci left: 4.834914e-01	ci right 4.855461e-01	k: 440912	n:910000
GLI2   910000 perm   526 sec   (1730 perm/sec)   p_kst 4.845187e-01   p_cons 2.032967e-04   p_joint 3.142857e-04

Joint ci ratio: 2.305519e-01	ci left: 2.779345e-04	ci right 3.513587e-04	k: 288	n:920000
Cons ci ratio: 2.866295e-01	ci left: 1.741643e-04	ci right 2.334054e-04	k: 186	n:920000
KS ci ratio: 4.214531e-03	ci left: 4.836044e-01	ci right 4.856479e-01	k: 445856	n:920000
GLI2   920000 perm   535 sec   (1719 perm/sec)   p_kst 4.846261e-01   p_cons 2.021739e-04   p_joint 3.130435e-04

Joint ci ratio: 2.350707e-01	ci left: 2.638075e-04	ci right 3.350644e-04	k: 277	n:930000
Cons ci ratio: 2.858663e-01	ci left: 1.732897e-04	ci right 2.320479e-04	k: 187	n:930000
KS ci ratio: 4.192355e-03	ci left: 4.835451e-01	ci right 4.855776e-01	k: 450642	n:930000
GLI2   930000 perm   544 sec   (1709 perm/sec)   p_kst 4.845613e-01   p_cons 2.010753e-04   p_joint 2.978495e-04

Joint ci ratio: 1.976964e-01	ci left: 3.767631e-04	ci right 4.604082e-04	k: 392	n:940000
Cons ci ratio: 2.843578e-01	ci left: 1.734217e-04	ci right 2.318587e-04	k: 189	n:940000
KS ci ratio: 4.169663e-03	ci left: 4.835903e-01	ci right 4.856119e-01	k: 455525	n:940000
GLI2   940000 perm   554 sec   (1698 perm/sec)   p_kst 4.846011e-01   p_cons 2.010638e-04   p_joint 4.170213e-04

Joint ci ratio: 1.815459e-01	ci left: 4.459996e-04	ci right 5.360389e-04	k: 465	n:950000
Cons ci ratio: 2.814107e-01	ci left: 1.755081e-04	ci right 2.339265e-04	k: 193	n:950000
KS ci ratio: 4.146978e-03	ci left: 4.836777e-01	ci right 4.856887e-01	k: 460449	n:950000
GLI2   950000 perm   563 sec   (1688 perm/sec)   p_kst 4.846832e-01   p_cons 2.031579e-04   p_joint 4.894737e-04

Joint ci ratio: 1.827271e-01	ci left: 4.353885e-04	ci right 5.239208e-04	k: 459	n:960000
Cons ci ratio: 2.792596e-01	ci left: 1.765852e-04	ci right 2.348339e-04	k: 196	n:960000
KS ci ratio: 4.124848e-03	ci left: 4.837404e-01	ci right 4.857409e-01	k: 465351	n:960000
GLI2   960000 perm   572 sec   (1678 perm/sec)   p_kst 4.847406e-01   p_cons 2.041667e-04   p_joint 4.781250e-04

Joint ci ratio: 1.819378e-01	ci left: 4.348354e-04	ci right 5.228313e-04	k: 463	n:970000
Cons ci ratio: 2.778528e-01	ci left: 1.766826e-04	ci right 2.346184e-04	k: 198	n:970000
KS ci ratio: 4.103975e-03	ci left: 4.836916e-01	ci right 4.856817e-01	k: 470146	n:970000
GLI2   970000 perm   582 sec   (1668 perm/sec)   p_kst 4.846866e-01   p_cons 2.041237e-04   p_joint 4.773196e-04

Joint ci ratio: 1.801982e-01	ci left: 4.391658e-04	ci right 5.270957e-04	k: 472	n:980000
Cons ci ratio: 2.764670e-01	ci left: 1.767787e-04	ci right 2.344066e-04	k: 200	n:980000
KS ci ratio: 4.082698e-03	ci left: 4.837315e-01	ci right 4.857115e-01	k: 475027	n:980000
GLI2   980000 perm   591 sec   (1658 perm/sec)   p_kst 4.847214e-01   p_cons 2.040816e-04   p_joint 4.816327e-04

Joint ci ratio: 1.781382e-01	ci left: 4.453428e-04	ci right 5.333802e-04	k: 483	n:990000
Cons ci ratio: 2.730908e-01	ci left: 1.796957e-04	ci right 2.374364e-04	k: 205	n:990000
KS ci ratio: 4.061814e-03	ci left: 4.837626e-01	ci right 4.857325e-01	k: 479900	n:990000
GLI2   990000 perm   601 sec   (1648 perm/sec)   p_kst 4.847475e-01   p_cons 2.070707e-04   p_joint 4.878788e-04

Joint ci ratio: 1.811596e-01	ci left: 4.256084e-04	ci right 5.113282e-04	k: 467	n:1000000
Cons ci ratio: 2.704772e-01	ci left: 1.816262e-04	ci right 2.393339e-04	k: 209	n:1000000
KS ci ratio: 4.042486e-03	ci left: 4.836400e-01	ci right 4.856001e-01	k: 484620	n:1000000
GLI2   1000000 perm   610 sec   (1639 perm/sec)   p_kst 4.846200e-01   p_cons 2.090000e-04   p_joint 4.670000e-04

Joint ci ratio: 1.803904e-01	ci left: 4.251756e-04	ci right 5.104050e-04	k: 471	n:1010000
Cons ci ratio: 2.698356e-01	ci left: 1.807510e-04	ci right 2.380213e-04	k: 210	n:1010000
KS ci ratio: 4.022736e-03	ci left: 4.836061e-01	ci right 4.855564e-01	k: 489427	n:1010000
GLI2   1010000 perm   620 sec   (1629 perm/sec)   p_kst 4.845812e-01   p_cons 2.079208e-04   p_joint 4.663366e-04

Joint ci ratio: 1.796309e-01	ci left: 4.247521e-04	ci right 5.094991e-04	k: 475	n:1020000
Cons ci ratio: 2.691986e-01	ci left: 1.798931e-04	ci right 2.367342e-04	k: 211	n:1020000
KS ci ratio: 4.002857e-03	ci left: 4.836248e-01	ci right 4.855655e-01	k: 494287	n:1020000
GLI2   1020000 perm   630 sec   (1620 perm/sec)   p_kst 4.845951e-01   p_cons 2.068627e-04   p_joint 4.656863e-04

Joint ci ratio: 1.595879e-01	ci left: 5.387159e-04	ci right 6.330613e-04	k: 602	n:1030000
Cons ci ratio: 2.673137e-01	ci left: 1.808633e-04	ci right 2.375439e-04	k: 214	n:1030000
KS ci ratio: 3.983301e-03	ci left: 4.836393e-01	ci right 4.855705e-01	k: 499143	n:1030000
GLI2   1030000 perm   640 sec   (1610 perm/sec)   p_kst 4.846049e-01   p_cons 2.077670e-04   p_joint 5.844660e-04

Joint ci ratio: 1.591926e-01	ci left: 5.363055e-04	ci right 6.299739e-04	k: 605	n:1040000
Cons ci ratio: 2.673140e-01	ci left: 1.791242e-04	ci right 2.352598e-04	k: 214	n:1040000
KS ci ratio: 3.964051e-03	ci left: 4.836506e-01	ci right 4.855726e-01	k: 503996	n:1040000
GLI2   1040000 perm   650 sec   (1600 perm/sec)   p_kst 4.846115e-01   p_cons 2.057692e-04   p_joint 5.817308e-04

Joint ci ratio: 1.613384e-01	ci left: 5.165704e-04	ci right 6.081260e-04	k: 589	n:1050000
Cons ci ratio: 2.654682e-01	ci left: 1.800846e-04	ci right 2.360667e-04	k: 217	n:1050000
KS ci ratio: 3.945010e-03	ci left: 4.836703e-01	ci right 4.855831e-01	k: 508858	n:1050000
GLI2   1050000 perm   660 sec   (1591 perm/sec)   p_kst 4.846267e-01   p_cons 2.066667e-04   p_joint 5.609524e-04

Joint ci ratio: 1.605242e-01	ci left: 5.171295e-04	ci right 6.082770e-04	k: 595	n:1060000
Cons ci ratio: 2.648616e-01	ci left: 1.792664e-04	ci right 2.348457e-04	k: 218	n:1060000
KS ci ratio: 3.926641e-03	ci left: 4.836387e-01	ci right 4.855425e-01	k: 513666	n:1060000
GLI2   1060000 perm   670 sec   (1582 perm/sec)   p_kst 4.845906e-01   p_cons 2.056604e-04   p_joint 5.613208e-04

Joint ci ratio: 1.610664e-01	ci left: 5.087085e-04	ci right 5.987038e-04	k: 591	n:1070000
Cons ci ratio: 2.642591e-01	ci left: 1.784636e-04	ci right 2.336473e-04	k: 219	n:1070000
KS ci ratio: 3.907956e-03	ci left: 4.836807e-01	ci right 4.855755e-01	k: 518552	n:1070000
GLI2   1070000 perm   680 sec   (1573 perm/sec)   p_kst 4.846280e-01   p_cons 2.046729e-04   p_joint 5.523364e-04

Joint ci ratio: 1.765075e-01	ci left: 4.161938e-04	ci right 4.976354e-04	k: 492	n:1080000
Cons ci ratio: 2.624754e-01	ci left: 1.794056e-04	ci right 2.344446e-04	k: 222	n:1080000
KS ci ratio: 3.889852e-03	ci left: 4.836811e-01	ci right 4.855671e-01	k: 523394	n:1080000
GLI2   1080000 perm   690 sec   (1564 perm/sec)   p_kst 4.846241e-01   p_cons 2.055556e-04   p_joint 4.555556e-04

Joint ci ratio: 1.821391e-01	ci left: 3.860871e-04	ci right 4.643139e-04	k: 462	n:1090000
Cons ci ratio: 2.607274e-01	ci left: 1.803315e-04	ci right 2.352261e-04	k: 225	n:1090000
KS ci ratio: 3.872304e-03	ci left: 4.836421e-01	ci right 4.855194e-01	k: 528193	n:1090000
GLI2   1090000 perm   701 sec   (1556 perm/sec)   p_kst 4.845807e-01   p_cons 2.064220e-04   p_joint 4.238532e-04

Joint ci ratio: 1.819430e-01	ci left: 3.834448e-04	ci right 4.610434e-04	k: 463	n:1100000
Cons ci ratio: 2.578899e-01	ci left: 1.829422e-04	ci right 2.379279e-04	k: 230	n:1100000
KS ci ratio: 3.854633e-03	ci left: 4.836502e-01	ci right 4.855190e-01	k: 533043	n:1100000
GLI2   1100000 perm   711 sec   (1547 perm/sec)   p_kst 4.845845e-01   p_cons 2.090909e-04   p_joint 4.209091e-04

Joint ci ratio: 1.809705e-01	ci left: 3.842903e-04	ci right 4.615987e-04	k: 468	n:1110000
Cons ci ratio: 2.567807e-01	ci left: 1.829796e-04	ci right 2.377021e-04	k: 232	n:1110000
KS ci ratio: 3.836835e-03	ci left: 4.837059e-01	ci right 4.855662e-01	k: 537946	n:1110000
GLI2   1110000 perm   722 sec   (1538 perm/sec)   p_kst 4.846360e-01   p_cons 2.090090e-04   p_joint 4.216216e-04

Joint ci ratio: 1.802036e-01	ci left: 3.842691e-04	ci right 4.612100e-04	k: 472	n:1120000
Cons ci ratio: 2.562315e-01	ci left: 1.821813e-04	ci right 2.365299e-04	k: 233	n:1120000
KS ci ratio: 3.819882e-03	ci left: 4.836821e-01	ci right 4.855341e-01	k: 542761	n:1120000
GLI2   1120000 perm   732 sec   (1529 perm/sec)   p_kst 4.846080e-01   p_cons 2.080357e-04   p_joint 4.214286e-04

Joint ci ratio: 1.790713e-01	ci left: 3.859395e-04	ci right 4.626767e-04	k: 478	n:1130000
Cons ci ratio: 2.546045e-01	ci left: 1.830541e-04	ci right 2.372612e-04	k: 236	n:1130000
KS ci ratio: 3.802795e-03	ci left: 4.837056e-01	ci right 4.855494e-01	k: 547629	n:1130000
GLI2   1130000 perm   743 sec   (1521 perm/sec)   p_kst 4.846274e-01   p_cons 2.088496e-04   p_joint 4.230088e-04

Joint ci ratio: 1.785133e-01	ci left: 3.850679e-04	ci right 4.613674e-04	k: 481	n:1140000
Cons ci ratio: 2.535370e-01	ci left: 1.830910e-04	ci right 2.370458e-04	k: 238	n:1140000
KS ci ratio: 3.785629e-03	ci left: 4.837690e-01	ci right 4.856047e-01	k: 552543	n:1140000
GLI2   1140000 perm   753 sec   (1513 perm/sec)   p_kst 4.846868e-01   p_cons 2.087719e-04   p_joint 4.219298e-04

Joint ci ratio: 1.779604e-01	ci left: 3.842118e-04	ci right 4.600805e-04	k: 484	n:1150000
Cons ci ratio: 2.524828e-01	ci left: 1.831278e-04	ci right 2.368337e-04	k: 240	n:1150000
KS ci ratio: 3.769133e-03	ci left: 4.837732e-01	ci right 4.856008e-01	k: 557390	n:1150000
GLI2   1150000 perm   764 sec   (1505 perm/sec)   p_kst 4.846870e-01   p_cons 2.086957e-04   p_joint 4.208696e-04

Joint ci ratio: 1.772311e-01	ci left: 3.841946e-04	ci right 4.597157e-04	k: 488	n:1160000
Cons ci ratio: 2.509258e-01	ci left: 1.839722e-04	ci right 2.375411e-04	k: 243	n:1160000
KS ci ratio: 3.752786e-03	ci left: 4.837858e-01	ci right 4.856056e-01	k: 562247	n:1160000
GLI2   1160000 perm   776 sec   (1496 perm/sec)   p_kst 4.846957e-01   p_cons 2.094828e-04   p_joint 4.206897e-04

Joint ci ratio: 1.768699e-01	ci left: 3.825445e-04	ci right 4.575716e-04	k: 490	n:1170000
Cons ci ratio: 2.488938e-01	ci left: 1.856045e-04	ci right 2.391432e-04	k: 247	n:1170000
KS ci ratio: 3.736727e-03	ci left: 4.837881e-01	ci right 4.856001e-01	k: 567092	n:1170000
GLI2   1170000 perm   786 sec   (1488 perm/sec)   p_kst 4.846940e-01   p_cons 2.111111e-04   p_joint 4.188034e-04

Joint ci ratio: 1.765110e-01	ci left: 3.809225e-04	ci right 4.554637e-04	k: 492	n:1180000
Cons ci ratio: 2.474018e-01	ci left: 1.864158e-04	ci right 2.398167e-04	k: 250	n:1180000
KS ci ratio: 3.721105e-03	ci left: 4.837589e-01	ci right 4.855632e-01	k: 571900	n:1180000
GLI2   1180000 perm   797 sec   (1480 perm/sec)   p_kst 4.846610e-01   p_cons 2.118644e-04   p_joint 4.169492e-04

Joint ci ratio: 1.757992e-01	ci left: 3.809346e-04	ci right 4.551457e-04	k: 496	n:1190000
Cons ci ratio: 2.459363e-01	ci left: 1.872145e-04	ci right 2.404780e-04	k: 253	n:1190000
KS ci ratio: 3.705167e-03	ci left: 4.837992e-01	ci right 4.855959e-01	k: 576790	n:1190000
GLI2   1190000 perm   808 sec   (1472 perm/sec)   p_kst 4.846975e-01   p_cons 2.126050e-04   p_joint 4.168067e-04

Joint ci ratio: 1.775960e-01	ci left: 3.697952e-04	ci right 4.426515e-04	k: 486	n:1200000
Cons ci ratio: 2.449738e-01	ci left: 1.872186e-04	ci right 2.402430e-04	k: 255	n:1200000
KS ci ratio: 3.689832e-03	ci left: 4.837846e-01	ci right 4.855738e-01	k: 581615	n:1200000
GLI2   1200000 perm   820 sec   (1464 perm/sec)   p_kst 4.846792e-01   p_cons 2.125000e-04   p_joint 4.050000e-04

Joint ci ratio: 1.772326e-01	ci left: 3.683185e-04	ci right 4.407195e-04	k: 488	n:1210000
Cons ci ratio: 2.440224e-01	ci left: 1.872229e-04	ci right 2.400115e-04	k: 257	n:1210000
KS ci ratio: 3.674454e-03	ci left: 4.838017e-01	ci right 4.855835e-01	k: 586478	n:1210000
GLI2   1210000 perm   831 sec   (1457 perm/sec)   p_kst 4.846926e-01   p_cons 2.123967e-04   p_joint 4.033058e-04

Joint ci ratio: 1.770519e-01	ci left: 3.660828e-04	ci right 4.379631e-04	k: 489	n:1220000
Cons ci ratio: 2.435510e-01	ci left: 1.864579e-04	ci right 2.389138e-04	k: 258	n:1220000
KS ci ratio: 3.659520e-03	ci left: 4.837841e-01	ci right 4.855586e-01	k: 591299	n:1220000
GLI2   1220000 perm   842 sec   (1450 perm/sec)   p_kst 4.846713e-01   p_cons 2.114754e-04   p_joint 4.008197e-04

Joint ci ratio: 1.765125e-01	ci left: 3.654376e-04	ci right 4.369493e-04	k: 492	n:1230000
Cons ci ratio: 2.421525e-01	ci left: 1.872326e-04	ci right 2.395586e-04	k: 261	n:1230000
KS ci ratio: 3.644374e-03	ci left: 4.838205e-01	ci right 4.855877e-01	k: 596186	n:1230000
GLI2   1230000 perm   853 sec   (1442 perm/sec)   p_kst 4.847041e-01   p_cons 2.121951e-04   p_joint 4.000000e-04

Joint ci ratio: 1.761557e-01	ci left: 3.640322e-04	ci right 4.351095e-04	k: 494	n:1240000
Cons ci ratio: 2.412335e-01	ci left: 1.872379e-04	ci right 2.393370e-04	k: 263	n:1240000
KS ci ratio: 3.629802e-03	ci left: 4.838031e-01	ci right 4.855631e-01	k: 601007	n:1240000
GLI2   1240000 perm   864 sec   (1435 perm/sec)   p_kst 4.846831e-01   p_cons 2.120968e-04   p_joint 3.983871e-04

Joint ci ratio: 1.756243e-01	ci left: 3.634143e-04	ci right 4.341342e-04	k: 497	n:1250000
Cons ci ratio: 2.407781e-01	ci left: 1.864917e-04	ci right 2.382706e-04	k: 264	n:1250000
KS ci ratio: 3.615195e-03	ci left: 4.838147e-01	ci right 4.855677e-01	k: 605864	n:1250000
GLI2   1250000 perm   875 sec   (1428 perm/sec)   p_kst 4.846912e-01   p_cons 2.112000e-04   p_joint 3.976000e-04

Joint ci ratio: 1.813623e-01	ci left: 3.370254e-04	ci right 4.049883e-04	k: 466	n:1260000
Cons ci ratio: 2.407783e-01	ci left: 1.850116e-04	ci right 2.363796e-04	k: 264	n:1260000
KS ci ratio: 3.600826e-03	ci left: 4.838175e-01	ci right 4.855635e-01	k: 610710	n:1260000
GLI2   1260000 perm   887 sec   (1421 perm/sec)   p_kst 4.846905e-01   p_cons 2.095238e-04   p_joint 3.698413e-04

Joint ci ratio: 1.811686e-01	ci left: 3.351233e-04	ci right 4.026226e-04	k: 467	n:1270000
Cons ci ratio: 2.398748e-01	ci left: 1.850348e-04	ci right 2.361878e-04	k: 266	n:1270000
KS ci ratio: 3.586875e-03	ci left: 4.837856e-01	ci right 4.855247e-01	k: 615512	n:1270000
GLI2   1270000 perm   898 sec   (1414 perm/sec)   p_kst 4.846551e-01   p_cons 2.094488e-04   p_joint 3.677165e-04

Joint ci ratio: 1.805908e-01	ci left: 3.347427e-04	ci right 4.019268e-04	k: 470	n:1280000
Cons ci ratio: 2.389814e-01	ci left: 1.850580e-04	ci right 2.359986e-04	k: 268	n:1280000
KS ci ratio: 3.572957e-03	ci left: 4.837721e-01	ci right 4.855045e-01	k: 620337	n:1280000
GLI2   1280000 perm   910 sec   (1407 perm/sec)   p_kst 4.846383e-01   p_cons 2.093750e-04   p_joint 3.671875e-04

Joint ci ratio: 1.802087e-01	ci left: 3.336282e-04	ci right 4.004315e-04	k: 472	n:1290000
Cons ci ratio: 2.389816e-01	ci left: 1.836234e-04	ci right 2.341692e-04	k: 268	n:1290000
KS ci ratio: 3.559304e-03	ci left: 4.837442e-01	ci right 4.854698e-01	k: 625143	n:1290000
GLI2   1290000 perm   922 sec   (1400 perm/sec)   p_kst 4.846070e-01   p_cons 2.077519e-04   p_joint 3.658915e-04

Joint ci ratio: 1.798290e-01	ci left: 3.325310e-04	ci right 3.989590e-04	k: 474	n:1300000
Cons ci ratio: 2.385387e-01	ci left: 1.829341e-04	ci right 2.331830e-04	k: 269	n:1300000
KS ci ratio: 3.545338e-03	ci left: 4.837829e-01	ci right 4.855018e-01	k: 630035	n:1300000
GLI2   1300000 perm   933 sec   (1393 perm/sec)   p_kst 4.846423e-01   p_cons 2.069231e-04   p_joint 3.646154e-04

Joint ci ratio: 1.796402e-01	ci left: 3.307215e-04	ci right 3.967112e-04	k: 475	n:1310000
Cons ci ratio: 2.380983e-01	ci left: 1.822554e-04	ci right 2.322119e-04	k: 270	n:1310000
KS ci ratio: 3.531474e-03	ci left: 4.838293e-01	ci right 4.855417e-01	k: 634938	n:1310000
GLI2   1310000 perm   945 sec   (1386 perm/sec)   p_kst 4.846855e-01   p_cons 2.061069e-04   p_joint 3.625954e-04

Joint ci ratio: 1.788901e-01	ci left: 3.311104e-04	ci right 3.968719e-04	k: 479	n:1320000
Cons ci ratio: 2.380985e-01	ci left: 1.808747e-04	ci right 2.304527e-04	k: 270	n:1320000
KS ci ratio: 3.518413e-03	ci left: 4.837842e-01	ci right 4.854901e-01	k: 639721	n:1320000
GLI2   1320000 perm   957 sec   (1379 perm/sec)   p_kst 4.846371e-01   p_cons 2.045455e-04   p_joint 3.628788e-04

Joint ci ratio: 1.774174e-01	ci left: 3.343677e-04	ci right 4.001708e-04	k: 487	n:1330000
Cons ci ratio: 2.359317e-01	ci left: 1.830509e-04	ci right 2.327022e-04	k: 275	n:1330000
KS ci ratio: 3.505110e-03	ci left: 4.837947e-01	ci right 4.854941e-01	k: 644577	n:1330000
GLI2   1330000 perm   969 sec   (1372 perm/sec)   p_kst 4.846444e-01   p_cons 2.067669e-04   p_joint 3.661654e-04

Joint ci ratio: 1.766947e-01	ci left: 3.347252e-04	ci right 4.003017e-04	k: 491	n:1340000
Cons ci ratio: 2.355055e-01	ci left: 1.823871e-04	ci right 2.317559e-04	k: 276	n:1340000
KS ci ratio: 3.492108e-03	ci left: 4.837833e-01	ci right 4.854764e-01	k: 649404	n:1340000
GLI2   1340000 perm   982 sec   (1365 perm/sec)   p_kst 4.846299e-01   p_cons 2.059701e-04   p_joint 3.664179e-04

Joint ci ratio: 1.785192e-01	ci left: 3.251675e-04	ci right 3.896003e-04	k: 481	n:1350000
Cons ci ratio: 2.346599e-01	ci left: 1.824303e-04	ci right 2.316077e-04	k: 278	n:1350000
KS ci ratio: 3.479317e-03	ci left: 4.837626e-01	ci right 4.854494e-01	k: 654218	n:1350000
GLI2   1350000 perm   994 sec   (1358 perm/sec)   p_kst 4.846059e-01   p_cons 2.059259e-04   p_joint 3.562963e-04

Joint ci ratio: 1.772366e-01	ci left: 3.276945e-04	ci right 3.921116e-04	k: 488	n:1360000
Cons ci ratio: 2.321763e-01	ci left: 1.852427e-04	ci right 2.345740e-04	k: 284	n:1360000
KS ci ratio: 3.466395e-03	ci left: 4.837811e-01	ci right 4.854617e-01	k: 659085	n:1360000
GLI2   1360000 perm   1007 sec   (1351 perm/sec)   p_kst 4.846213e-01   p_cons 2.088235e-04   p_joint 3.588235e-04

Joint ci ratio: 1.765161e-01	ci left: 3.280930e-04	ci right 3.922983e-04	k: 492	n:1370000
Cons ci ratio: 2.313660e-01	ci left: 1.852657e-04	ci right 2.344062e-04	k: 286	n:1370000
KS ci ratio: 3.454161e-03	ci left: 4.837205e-01	ci right 4.853949e-01	k: 663844	n:1370000
GLI2   1370000 perm   1019 sec   (1344 perm/sec)   p_kst 4.845577e-01   p_cons 2.087591e-04   p_joint 3.591241e-04

Joint ci ratio: 1.763375e-01	ci left: 3.264082e-04	ci right 3.902122e-04	k: 493	n:1380000
Cons ci ratio: 2.305640e-01	ci left: 1.852886e-04	ci right 2.342406e-04	k: 288	n:1380000
KS ci ratio: 3.441801e-03	ci left: 4.836977e-01	ci right 4.853661e-01	k: 668654	n:1380000
GLI2   1380000 perm   1031 sec   (1338 perm/sec)   p_kst 4.845319e-01   p_cons 2.086957e-04   p_joint 3.572464e-04

Joint ci ratio: 1.756279e-01	ci left: 3.268109e-04	ci right 3.904092e-04	k: 497	n:1390000
Cons ci ratio: 2.301662e-01	ci left: 1.846335e-04	ci right 2.333163e-04	k: 289	n:1390000
KS ci ratio: 3.429207e-03	ci left: 4.837286e-01	ci right 4.853909e-01	k: 673538	n:1390000
GLI2   1390000 perm   1044 sec   (1332 perm/sec)   p_kst 4.845597e-01   p_cons 2.079137e-04   p_joint 3.575540e-04

Joint ci ratio: 1.749267e-01	ci left: 3.272083e-04	ci right 3.906029e-04	k: 501	n:1400000
Cons ci ratio: 2.297705e-01	ci left: 1.839878e-04	ci right 2.324052e-04	k: 290	n:1400000
KS ci ratio: 3.417351e-03	ci left: 4.836711e-01	ci right 4.853275e-01	k: 678299	n:1400000
GLI2   1400000 perm   1056 sec   (1325 perm/sec)   p_kst 4.844993e-01   p_cons 2.071429e-04   p_joint 3.578571e-04

Joint ci ratio: 1.737195e-01	ci left: 3.296356e-04	ci right 3.930136e-04	k: 508	n:1410000
Cons ci ratio: 2.282073e-01	ci left: 1.853571e-04	ci right 2.337562e-04	k: 294	n:1410000
KS ci ratio: 3.405144e-03	ci left: 4.836840e-01	ci right 4.853345e-01	k: 683158	n:1410000
GLI2   1410000 perm   1069 sec   (1319 perm/sec)   p_kst 4.845092e-01   p_cons 2.085106e-04   p_joint 3.602837e-04

Joint ci ratio: 1.730409e-01	ci left: 3.300089e-04	ci right 3.931849e-04	k: 512	n:1420000
Cons ci ratio: 2.274376e-01	ci left: 1.853798e-04	ci right 2.335987e-04	k: 296	n:1420000
KS ci ratio: 3.393324e-03	ci left: 4.836587e-01	ci right 4.853034e-01	k: 687963	n:1420000
GLI2   1420000 perm   1081 sec   (1313 perm/sec)   p_kst 4.844810e-01   p_cons 2.084507e-04   p_joint 3.605634e-04

Joint ci ratio: 1.725372e-01	ci left: 3.297084e-04	ci right 3.926239e-04	k: 515	n:1430000
Cons ci ratio: 2.266757e-01	ci left: 1.854025e-04	ci right 2.334432e-04	k: 298	n:1430000
KS ci ratio: 3.381566e-03	ci left: 4.836428e-01	ci right 4.852817e-01	k: 692781	n:1430000
GLI2   1430000 perm   1094 sec   (1307 perm/sec)   p_kst 4.844622e-01   p_cons 2.083916e-04   p_joint 3.601399e-04

Joint ci ratio: 1.718723e-01	ci left: 3.300768e-04	ci right 3.927947e-04	k: 519	n:1440000
Cons ci ratio: 2.262977e-01	ci left: 1.847700e-04	ci right 2.325558e-04	k: 299	n:1440000
KS ci ratio: 3.369385e-03	ci left: 4.837077e-01	ci right 4.853409e-01	k: 697715	n:1440000
GLI2   1440000 perm   1107 sec   (1301 perm/sec)   p_kst 4.845243e-01   p_cons 2.076389e-04   p_joint 3.604167e-04

Joint ci ratio: 1.718725e-01	ci left: 3.278003e-04	ci right 3.900858e-04	k: 519	n:1450000
Cons ci ratio: 2.255471e-01	ci left: 1.847970e-04	ci right 2.324092e-04	k: 301	n:1450000
KS ci ratio: 3.357613e-03	ci left: 4.837304e-01	ci right 4.853580e-01	k: 702589	n:1450000
GLI2   1450000 perm   1120 sec   (1295 perm/sec)   p_kst 4.845441e-01   p_cons 2.075862e-04   p_joint 3.579310e-04

Joint ci ratio: 2.757911e-01	ci left: 1.192967e-04	ci right 1.580744e-04	k: 201	n:1460000
Cons ci ratio: 2.244350e-01	ci left: 1.854703e-04	ci right 2.329878e-04	k: 304	n:1460000
KS ci ratio: 3.346065e-03	ci left: 4.837377e-01	ci right 4.853597e-01	k: 707441	n:1460000
GLI2   1460000 perm   1132 sec   (1289 perm/sec)   p_kst 4.845486e-01   p_cons 2.082192e-04   p_joint 1.376712e-04

Joint ci ratio: 2.751110e-01	ci left: 1.191185e-04	ci right 1.577263e-04	k: 202	n:1470000
Cons ci ratio: 2.237028e-01	ci left: 1.854928e-04	ci right 2.328396e-04	k: 306	n:1470000
KS ci ratio: 3.335116e-03	ci left: 4.836728e-01	ci right 4.852892e-01	k: 712187	n:1470000
GLI2   1470000 perm   1145 sec   (1283 perm/sec)   p_kst 4.844810e-01   p_cons 2.081633e-04   p_joint 1.374150e-04

Joint ci ratio: 2.744359e-01	ci left: 1.189427e-04	ci right 1.573826e-04	k: 203	n:1480000
Cons ci ratio: 2.219028e-01	ci left: 1.874293e-04	ci right 2.348330e-04	k: 311	n:1480000
KS ci ratio: 3.323775e-03	ci left: 4.836837e-01	ci right 4.852947e-01	k: 717044	n:1480000
GLI2   1480000 perm   1158 sec   (1278 perm/sec)   p_kst 4.844892e-01   p_cons 2.101351e-04   p_joint 1.371622e-04

Joint ci ratio: 2.737657e-01	ci left: 1.187695e-04	ci right 1.570435e-04	k: 204	n:1490000
Cons ci ratio: 2.208436e-01	ci left: 1.880732e-04	ci right 2.353818e-04	k: 314	n:1490000
KS ci ratio: 3.312393e-03	ci left: 4.837181e-01	ci right 4.853236e-01	k: 721936	n:1490000
GLI2   1490000 perm   1172 sec   (1272 perm/sec)   p_kst 4.845208e-01   p_cons 2.107383e-04   p_joint 1.369128e-04

Joint ci ratio: 2.737659e-01	ci left: 1.179777e-04	ci right 1.559966e-04	k: 204	n:1500000
Cons ci ratio: 2.208437e-01	ci left: 1.868194e-04	ci right 2.338126e-04	k: 314	n:1500000
KS ci ratio: 3.301343e-03	ci left: 4.837193e-01	ci right 4.853195e-01	k: 726779	n:1500000
GLI2   1500000 perm   1185 sec   (1266 perm/sec)   p_kst 4.845193e-01   p_cons 2.093333e-04   p_joint 1.360000e-04

Joint ci ratio: 2.724401e-01	ci left: 1.184302e-04	ci right 1.563785e-04	k: 206	n:1510000
Cons ci ratio: 2.204941e-01	ci left: 1.862078e-04	ci right 2.329630e-04	k: 315	n:1510000
KS ci ratio: 3.290407e-03	ci left: 4.837198e-01	ci right 4.853147e-01	k: 731621	n:1510000
GLI2   1510000 perm   1198 sec   (1261 perm/sec)   p_kst 4.845172e-01   p_cons 2.086093e-04   p_joint 1.364238e-04

Joint ci ratio: 2.717844e-01	ci left: 1.182640e-04	ci right 1.560523e-04	k: 207	n:1520000
Cons ci ratio: 2.191115e-01	ci left: 1.874695e-04	ci right 2.342065e-04	k: 319	n:1520000
KS ci ratio: 3.279653e-03	ci left: 4.837092e-01	ci right 4.852988e-01	k: 736446	n:1520000
GLI2   1520000 perm   1211 sec   (1255 perm/sec)   p_kst 4.845039e-01   p_cons 2.098684e-04   p_joint 1.361842e-04

Joint ci ratio: 2.711335e-01	ci left: 1.181002e-04	ci right 1.557304e-04	k: 208	n:1530000
Cons ci ratio: 2.187700e-01	ci left: 1.868619e-04	ci right 2.333651e-04	k: 320	n:1530000
KS ci ratio: 3.269362e-03	ci left: 4.836438e-01	ci right 4.852282e-01	k: 741187	n:1530000
GLI2   1530000 perm   1224 sec   (1250 perm/sec)   p_kst 4.844359e-01   p_cons 2.091503e-04   p_joint 1.359477e-04

Joint ci ratio: 2.731010e-01	ci left: 1.155181e-04	ci right 1.526385e-04	k: 205	n:1540000
Cons ci ratio: 2.180917e-01	ci left: 1.868762e-04	ci right 2.332194e-04	k: 322	n:1540000
KS ci ratio: 3.258825e-03	ci left: 4.836318e-01	ci right 4.852111e-01	k: 746009	n:1540000
GLI2   1540000 perm   1238 sec   (1244 perm/sec)   p_kst 4.844214e-01   p_cons 2.090909e-04   p_joint 1.331169e-04

Joint ci ratio: 2.724406e-01	ci left: 1.153739e-04	ci right 1.523429e-04	k: 206	n:1550000
Cons ci ratio: 2.164228e-01	ci left: 1.887208e-04	ci right 2.351158e-04	k: 327	n:1550000
KS ci ratio: 3.248267e-03	ci left: 4.836388e-01	ci right 4.852129e-01	k: 750860	n:1550000
GLI2   1550000 perm   1251 sec   (1239 perm/sec)   p_kst 4.844258e-01   p_cons 2.109677e-04   p_joint 1.329032e-04

Joint ci ratio: 2.724407e-01	ci left: 1.146343e-04	ci right 1.513664e-04	k: 206	n:1560000
Cons ci ratio: 2.160937e-01	ci left: 1.881174e-04	ci right 2.342844e-04	k: 328	n:1560000
KS ci ratio: 3.237724e-03	ci left: 4.836591e-01	ci right 4.852282e-01	k: 755732	n:1560000
GLI2   1560000 perm   1265 sec   (1233 perm/sec)   p_kst 4.844436e-01   p_cons 2.102564e-04   p_joint 1.320513e-04

Joint ci ratio: 2.724408e-01	ci left: 1.139041e-04	ci right 1.504023e-04	k: 206	n:1570000
Cons ci ratio: 2.151151e-01	ci left: 1.887268e-04	ci right 2.348059e-04	k: 331	n:1570000
KS ci ratio: 3.227468e-03	ci left: 4.836505e-01	ci right 4.852146e-01	k: 760559	n:1570000
GLI2   1570000 perm   1278 sec   (1228 perm/sec)   p_kst 4.844325e-01   p_cons 2.108280e-04   p_joint 1.312102e-04

Joint ci ratio: 2.717851e-01	ci left: 1.137730e-04	ci right 1.501264e-04	k: 207	n:1580000
Cons ci ratio: 2.144701e-01	ci left: 1.887301e-04	ci right 2.346536e-04	k: 333	n:1580000
KS ci ratio: 3.217468e-03	ci left: 4.836173e-01	ci right 4.851764e-01	k: 765347	n:1580000
GLI2   1580000 perm   1292 sec   (1223 perm/sec)   p_kst 4.843968e-01   p_cons 2.107595e-04   p_joint 1.310127e-04

Joint ci ratio: 2.717852e-01	ci left: 1.130574e-04	ci right 1.491822e-04	k: 207	n:1590000
Cons ci ratio: 2.141498e-01	ci left: 1.881383e-04	ci right 2.338405e-04	k: 334	n:1590000
KS ci ratio: 3.207496e-03	ci left: 4.835946e-01	ci right 4.851488e-01	k: 770151	n:1590000
GLI2   1590000 perm   1306 sec   (1218 perm/sec)   p_kst 4.843717e-01   p_cons 2.100629e-04   p_joint 1.301887e-04

Joint ci ratio: 2.711343e-01	ci left: 1.129333e-04	ci right 1.489172e-04	k: 208	n:1600000
Cons ci ratio: 2.131973e-01	ci left: 1.887371e-04	ci right 2.343542e-04	k: 337	n:1600000
KS ci ratio: 3.197303e-03	ci left: 4.836210e-01	ci right 4.851703e-01	k: 775033	n:1600000
GLI2   1600000 perm   1320 sec   (1212 perm/sec)   p_kst 4.843956e-01   p_cons 2.106250e-04   p_joint 1.300000e-04

Joint ci ratio: 2.704880e-01	ci left: 1.128108e-04	ci right 1.486555e-04	k: 209	n:1610000
Cons ci ratio: 2.119467e-01	ci left: 1.899171e-04	ci right 2.355151e-04	k: 341	n:1610000
KS ci ratio: 3.187346e-03	ci left: 4.836253e-01	ci right 4.851698e-01	k: 779880	n:1610000
GLI2   1610000 perm   1334 sec   (1207 perm/sec)   p_kst 4.843975e-01   p_cons 2.118012e-04   p_joint 1.298137e-04

Joint ci ratio: 2.692090e-01	ci left: 1.132655e-04	ci right 1.490557e-04	k: 211	n:1620000
Cons ci ratio: 2.107179e-01	ci left: 1.910832e-04	ci right 2.366609e-04	k: 345	n:1620000
KS ci ratio: 3.177435e-03	ci left: 4.836369e-01	ci right 4.851767e-01	k: 784739	n:1620000
GLI2   1620000 perm   1349 sec   (1201 perm/sec)   p_kst 4.844068e-01   p_cons 2.129630e-04   p_joint 1.302469e-04

Joint ci ratio: 2.673241e-01	ci left: 1.142873e-04	ci right 1.501052e-04	k: 214	n:1630000
Cons ci ratio: 2.098103e-01	ci left: 1.916545e-04	ci right 2.371462e-04	k: 348	n:1630000
KS ci ratio: 3.167514e-03	ci left: 4.836644e-01	ci right 4.851994e-01	k: 789624	n:1630000
GLI2   1630000 perm   1363 sec   (1196 perm/sec)   p_kst 4.844319e-01   p_cons 2.134969e-04   p_joint 1.312883e-04

Joint ci ratio: 2.660893e-01	ci left: 1.147284e-04	ci right 1.504908e-04	k: 216	n:1640000
Cons ci ratio: 2.083231e-01	ci left: 1.933751e-04	ci right 2.389083e-04	k: 353	n:1640000
KS ci ratio: 3.157550e-03	ci left: 4.837129e-01	ci right 4.852432e-01	k: 794544	n:1640000
GLI2   1640000 perm   1378 sec   (1191 perm/sec)   p_kst 4.844780e-01   p_cons 2.152439e-04   p_joint 1.317073e-04

Joint ci ratio: 2.654783e-01	ci left: 1.145988e-04	ci right 1.502251e-04	k: 217	n:1650000
Cons ci ratio: 2.077371e-01	ci left: 1.933521e-04	ci right 2.387356e-04	k: 355	n:1650000
KS ci ratio: 3.148280e-03	ci left: 4.836657e-01	ci right 4.851914e-01	k: 799307	n:1650000
GLI2   1650000 perm   1392 sec   (1185 perm/sec)   p_kst 4.844285e-01   p_cons 2.151515e-04   p_joint 1.315152e-04

Joint ci ratio: 2.642688e-01	ci left: 1.150332e-04	ci right 1.506048e-04	k: 219	n:1660000
Cons ci ratio: 2.065797e-01	ci left: 1.944720e-04	ci right 2.398319e-04	k: 359	n:1660000
KS ci ratio: 3.139068e-03	ci left: 4.836226e-01	ci right 4.851437e-01	k: 804076	n:1660000
GLI2   1660000 perm   1406 sec   (1181 perm/sec)   p_kst 4.843831e-01   p_cons 2.162651e-04   p_joint 1.319277e-04

Joint ci ratio: 2.636702e-01	ci left: 1.149036e-04	ci right 1.503413e-04	k: 220	n:1670000
Cons ci ratio: 2.060082e-01	ci left: 1.944432e-04	ci right 2.396551e-04	k: 361	n:1670000
KS ci ratio: 3.130075e-03	ci left: 4.835579e-01	ci right 4.850745e-01	k: 808808	n:1670000
GLI2   1670000 perm   1420 sec   (1176 perm/sec)   p_kst 4.843162e-01   p_cons 2.161677e-04   p_joint 1.317365e-04

Joint ci ratio: 2.624851e-01	ci left: 1.153316e-04	ci right 1.507152e-04	k: 222	n:1680000
Cons ci ratio: 2.054415e-01	ci left: 1.944149e-04	ci right 2.394803e-04	k: 363	n:1680000
KS ci ratio: 3.120828e-03	ci left: 4.835470e-01	ci right 4.850590e-01	k: 813629	n:1680000
GLI2   1680000 perm   1435 sec   (1171 perm/sec)   p_kst 4.843030e-01   p_cons 2.160714e-04   p_joint 1.321429e-04

Joint ci ratio: 2.613159e-01	ci left: 1.157549e-04	ci right 1.510843e-04	k: 224	n:1690000
Cons ci ratio: 2.046001e-01	ci left: 1.949486e-04	ci right 2.399294e-04	k: 366	n:1690000
KS ci ratio: 3.111761e-03	ci left: 4.835202e-01	ci right 4.850277e-01	k: 818423	n:1690000
GLI2   1690000 perm   1449 sec   (1166 perm/sec)   p_kst 4.842740e-01   p_cons 2.165680e-04   p_joint 1.325444e-04

Joint ci ratio: 2.613160e-01	ci left: 1.150740e-04	ci right 1.501956e-04	k: 224	n:1700000
Cons ci ratio: 2.046002e-01	ci left: 1.938018e-04	ci right 2.385181e-04	k: 366	n:1700000
KS ci ratio: 3.102364e-03	ci left: 4.835597e-01	ci right 4.850627e-01	k: 823329	n:1700000
GLI2   1700000 perm   1464 sec   (1161 perm/sec)   p_kst 4.843112e-01   p_cons 2.152941e-04   p_joint 1.317647e-04

Joint ci ratio: 2.607372e-01	ci left: 1.149476e-04	ci right 1.499402e-04	k: 225	n:1710000
Cons ci ratio: 2.040450e-01	ci left: 1.937782e-04	ci right 2.383526e-04	k: 368	n:1710000
KS ci ratio: 3.093389e-03	ci left: 4.835443e-01	ci right 4.850429e-01	k: 828142	n:1710000
GLI2   1710000 perm   1479 sec   (1157 perm/sec)   p_kst 4.842936e-01   p_cons 2.152047e-04   p_joint 1.315789e-04

Joint ci ratio: 1.883594e-01	ci left: 2.280364e-04	ci right 2.759983e-04	k: 432	n:1720000
Cons ci ratio: 2.024058e-01	ci left: 1.959625e-04	ci right 2.406325e-04	k: 374	n:1720000
KS ci ratio: 3.084491e-03	ci left: 4.835290e-01	ci right 4.850233e-01	k: 832955	n:1720000
GLI2   1720000 perm   1493 sec   (1152 perm/sec)   p_kst 4.842762e-01   p_cons 2.174419e-04   p_joint 2.511628e-04

Joint ci ratio: 1.872811e-01	ci left: 2.294726e-04	ci right 2.774288e-04	k: 437	n:1730000
Cons ci ratio: 2.008055e-01	ci left: 1.981229e-04	ci right 2.428845e-04	k: 380	n:1730000
KS ci ratio: 3.075420e-03	ci left: 4.835545e-01	ci right 4.850444e-01	k: 837838	n:1730000
GLI2   1730000 perm   1508 sec   (1147 perm/sec)   p_kst 4.842994e-01   p_cons 2.196532e-04   p_joint 2.526012e-04

Joint ci ratio: 1.868550e-01	ci left: 2.292494e-04	ci right 2.770376e-04	k: 439	n:1740000
Cons ci ratio: 2.000195e-01	ci left: 1.986219e-04	ci right 2.432992e-04	k: 383	n:1740000
KS ci ratio: 3.066559e-03	ci left: 4.835583e-01	ci right 4.850440e-01	k: 842684	n:1740000
GLI2   1740000 perm   1523 sec   (1142 perm/sec)   p_kst 4.843011e-01   p_cons 2.201149e-04   p_joint 2.522989e-04

Joint ci ratio: 1.864318e-01	ci left: 2.290288e-04	ci right 2.766507e-04	k: 441	n:1750000
Cons ci ratio: 1.984747e-01	ci left: 2.007445e-04	ci right 2.455083e-04	k: 389	n:1750000
KS ci ratio: 3.057701e-03	ci left: 4.835742e-01	ci right 4.850556e-01	k: 847551	n:1750000
GLI2   1750000 perm   1538 sec   (1138 perm/sec)   p_kst 4.843149e-01   p_cons 2.222857e-04   p_joint 2.520000e-04

Joint ci ratio: 1.860114e-01	ci left: 2.288109e-04	ci right 2.762681e-04	k: 443	n:1760000
Cons ci ratio: 1.979678e-01	ci left: 2.006839e-04	ci right 2.453060e-04	k: 391	n:1760000
KS ci ratio: 3.048902e-03	ci left: 4.835927e-01	ci right 4.850699e-01	k: 852423	n:1760000
GLI2   1760000 perm   1553 sec   (1133 perm/sec)   p_kst 4.843312e-01   p_cons 2.221591e-04   p_joint 2.517045e-04

Joint ci ratio: 1.849727e-01	ci left: 2.302119e-04	ci right 2.776631e-04	k: 448	n:1770000
Cons ci ratio: 1.962233e-01	ci left: 2.033097e-04	ci right 2.480698e-04	k: 398	n:1770000
KS ci ratio: 3.040474e-03	ci left: 4.835624e-01	ci right 4.850354e-01	k: 857209	n:1770000
GLI2   1770000 perm   1568 sec   (1128 perm/sec)   p_kst 4.842989e-01   p_cons 2.248588e-04   p_joint 2.531073e-04

Joint ci ratio: 1.847672e-01	ci left: 2.294544e-04	ci right 2.766910e-04	k: 449	n:1780000
Cons ci ratio: 1.957334e-01	ci left: 2.032360e-04	ci right 2.478548e-04	k: 400	n:1780000
KS ci ratio: 3.031993e-03	ci left: 4.835527e-01	ci right 4.850215e-01	k: 862031	n:1780000
GLI2   1780000 perm   1584 sec   (1124 perm/sec)   p_kst 4.842871e-01   p_cons 2.247191e-04   p_joint 2.522472e-04

Joint ci ratio: 1.843580e-01	ci left: 2.292382e-04	ci right 2.763141e-04	k: 451	n:1790000
Cons ci ratio: 1.954898e-01	ci left: 2.026319e-04	ci right 2.470561e-04	k: 401	n:1790000
KS ci ratio: 3.023617e-03	ci left: 4.835375e-01	ci right 4.850022e-01	k: 866843	n:1790000
GLI2   1790000 perm   1599 sec   (1119 perm/sec)   p_kst 4.842698e-01   p_cons 2.240223e-04   p_joint 2.519553e-04

Joint ci ratio: 1.835475e-01	ci left: 2.300845e-04	ci right 2.771035e-04	k: 455	n:1800000
Cons ci ratio: 1.950053e-01	ci left: 2.025630e-04	ci right 2.468490e-04	k: 403	n:1800000
KS ci ratio: 3.015349e-03	ci left: 4.835158e-01	ci right 4.849765e-01	k: 871643	n:1800000
GLI2   1800000 perm   1614 sec   (1115 perm/sec)   p_kst 4.842461e-01   p_cons 2.238889e-04   p_joint 2.527778e-04

Joint ci ratio: 1.926354e-01	ci left: 2.067007e-04	ci right 2.512777e-04	k: 413	n:1810000
Cons ci ratio: 1.940470e-01	ci left: 2.035462e-04	ci right 2.478026e-04	k: 407	n:1810000
KS ci ratio: 3.007036e-03	ci left: 4.835131e-01	ci right 4.849698e-01	k: 876477	n:1810000
GLI2   1810000 perm   1630 sec   (1110 perm/sec)   p_kst 4.842414e-01   p_cons 2.248619e-04   p_joint 2.281768e-04

Joint ci ratio: 1.708954e-01	ci left: 2.643142e-04	ci right 3.142216e-04	k: 525	n:1820000
Cons ci ratio: 1.931026e-01	ci left: 2.045191e-04	ci right 2.487452e-04	k: 411	n:1820000
KS ci ratio: 2.998884e-03	ci left: 4.834951e-01	ci right 4.849478e-01	k: 881283	n:1820000
GLI2   1820000 perm   1647 sec   (1105 perm/sec)   p_kst 4.842214e-01   p_cons 2.258242e-04   p_joint 2.884615e-04

Joint ci ratio: 1.704101e-01	ci left: 2.644392e-04	ci right 3.142138e-04	k: 528	n:1830000
Cons ci ratio: 1.924034e-01	ci left: 2.049617e-04	ci right 2.491043e-04	k: 414	n:1830000
KS ci ratio: 2.990752e-03	ci left: 4.834850e-01	ci right 4.849336e-01	k: 886103	n:1830000
GLI2   1830000 perm   1663 sec   (1101 perm/sec)   p_kst 4.842093e-01   p_cons 2.262295e-04   p_joint 2.885246e-04

Joint ci ratio: 1.700889e-01	ci left: 2.640426e-04	ci right 3.136394e-04	k: 530	n:1840000
Cons ci ratio: 1.914827e-01	ci left: 2.059173e-04	ci right 2.500287e-04	k: 418	n:1840000
KS ci ratio: 2.982656e-03	ci left: 4.834798e-01	ci right 4.849246e-01	k: 890932	n:1840000
GLI2   1840000 perm   1678 sec   (1096 perm/sec)   p_kst 4.842022e-01   p_cons 2.271739e-04   p_joint 2.880435e-04

Joint ci ratio: 1.700890e-01	ci left: 2.626154e-04	ci right 3.119441e-04	k: 530	n:1850000
Cons ci ratio: 1.905751e-01	ci left: 2.068630e-04	ci right 2.509426e-04	k: 422	n:1850000
KS ci ratio: 2.974600e-03	ci left: 4.834791e-01	ci right 4.849199e-01	k: 895769	n:1850000
GLI2   1850000 perm   1695 sec   (1091 perm/sec)   p_kst 4.841995e-01   p_cons 2.281081e-04   p_joint 2.864865e-04

Joint ci ratio: 1.696106e-01	ci left: 2.627478e-04	ci right 3.119483e-04	k: 533	n:1860000
Cons ci ratio: 1.896803e-01	ci left: 2.077990e-04	ci right 2.518462e-04	k: 426	n:1860000
KS ci ratio: 2.966593e-03	ci left: 4.834810e-01	ci right 4.849180e-01	k: 900611	n:1860000
GLI2   1860000 perm   1711 sec   (1087 perm/sec)   p_kst 4.841995e-01   p_cons 2.290323e-04   p_joint 2.865591e-04

Joint ci ratio: 1.689788e-01	ci left: 2.633911e-04	ci right 3.125098e-04	k: 537	n:1870000
Cons ci ratio: 1.887979e-01	ci left: 2.087255e-04	ci right 2.527397e-04	k: 430	n:1870000
KS ci ratio: 2.958647e-03	ci left: 4.834835e-01	ci right 4.849166e-01	k: 905454	n:1870000
GLI2   1870000 perm   1727 sec   (1083 perm/sec)   p_kst 4.842000e-01   p_cons 2.299465e-04   p_joint 2.871658e-04

Joint ci ratio: 1.727121e-01	ci left: 2.502790e-04	ci right 2.980911e-04	k: 514	n:1880000
Cons ci ratio: 1.883614e-01	ci left: 2.086288e-04	ci right 2.525093e-04	k: 432	n:1880000
KS ci ratio: 2.954890e-03	ci left: 4.827881e-01	ci right 4.842173e-01	k: 908985	n:1880000
GLI2   1880000 perm   1743 sec   (1079 perm/sec)   p_kst 4.835027e-01   p_cons 2.297872e-04   p_joint 2.734043e-04

Joint ci ratio: 1.725448e-01	ci left: 2.494610e-04	ci right 2.970658e-04	k: 515	n:1890000
Cons ci ratio: 1.877122e-01	ci left: 2.090376e-04	ci right 2.528352e-04	k: 435	n:1890000
KS ci ratio: 2.946663e-03	ci left: 4.828577e-01	ci right 4.842831e-01	k: 913948	n:1890000
GLI2   1890000 perm   1759 sec   (1074 perm/sec)   p_kst 4.835704e-01   p_cons 2.301587e-04   p_joint 2.724868e-04

Joint ci ratio: 1.718798e-01	ci left: 2.501626e-04	ci right 2.976982e-04	k: 519	n:1900000
Cons ci ratio: 1.866450e-01	ci left: 2.104457e-04	ci right 2.542593e-04	k: 440	n:1900000
KS ci ratio: 2.938960e-03	ci left: 4.828492e-01	ci right 4.842709e-01	k: 918764	n:1900000
GLI2   1900000 perm   1775 sec   (1070 perm/sec)   p_kst 4.835600e-01   p_cons 2.315789e-04   p_joint 2.731579e-04

Joint ci ratio: 1.713861e-01	ci left: 2.503560e-04	ci right 2.977777e-04	k: 522	n:1910000
Cons ci ratio: 1.862232e-01	ci left: 2.103421e-04	ci right 2.540240e-04	k: 442	n:1910000
KS ci ratio: 2.931396e-03	ci left: 4.828272e-01	ci right 4.842451e-01	k: 923554	n:1910000
GLI2   1910000 perm   1792 sec   (1066 perm/sec)   p_kst 4.835361e-01   p_cons 2.314136e-04   p_joint 2.732984e-04

Joint ci ratio: 1.713862e-01	ci left: 2.490521e-04	ci right 2.962268e-04	k: 522	n:1920000
Cons ci ratio: 1.855958e-01	ci left: 2.107364e-04	ci right 2.543361e-04	k: 445	n:1920000
KS ci ratio: 2.923760e-03	ci left: 4.828278e-01	ci right 4.842420e-01	k: 928387	n:1920000
GLI2   1920000 perm   1808 sec   (1062 perm/sec)   p_kst 4.835349e-01   p_cons 2.317708e-04   p_joint 2.718750e-04

Joint ci ratio: 1.705727e-01	ci left: 2.502415e-04	ci right 2.973933e-04	k: 527	n:1930000
Cons ci ratio: 1.847690e-01	ci left: 2.116209e-04	ci right 2.551868e-04	k: 449	n:1930000
KS ci ratio: 2.916379e-03	ci left: 4.827947e-01	ci right 4.842053e-01	k: 933155	n:1930000
GLI2   1930000 perm   1825 sec   (1058 perm/sec)   p_kst 4.835000e-01   p_cons 2.326425e-04   p_joint 2.730570e-04

Joint ci ratio: 1.699302e-01	ci left: 2.509256e-04	ci right 2.980100e-04	k: 531	n:1940000
Cons ci ratio: 1.847691e-01	ci left: 2.105301e-04	ci right 2.538714e-04	k: 449	n:1940000
KS ci ratio: 2.908676e-03	ci left: 4.828270e-01	ci right 4.842339e-01	k: 938049	n:1940000
GLI2   1940000 perm   1841 sec   (1054 perm/sec)   p_kst 4.835304e-01   p_cons 2.314433e-04   p_joint 2.737113e-04

Joint ci ratio: 1.696117e-01	ci left: 2.506208e-04	ci right 2.975509e-04	k: 533	n:1950000
Cons ci ratio: 1.841562e-01	ci left: 2.109179e-04	ci right 2.541789e-04	k: 452	n:1950000
KS ci ratio: 2.901248e-03	ci left: 4.828220e-01	ci right 4.842253e-01	k: 942871	n:1950000
GLI2   1950000 perm   1859 sec   (1049 perm/sec)   p_kst 4.835236e-01   p_cons 2.317949e-04   p_joint 2.733333e-04

Joint ci ratio: 1.798401e-01	ci left: 2.205551e-04	ci right 2.646172e-04	k: 474	n:1960000
Cons ci ratio: 1.837511e-01	ci left: 2.108152e-04	ci right 2.539494e-04	k: 454	n:1960000
KS ci ratio: 2.893729e-03	ci left: 4.828425e-01	ci right 4.842422e-01	k: 947743	n:1960000
GLI2   1960000 perm   1875 sec   (1045 perm/sec)   p_kst 4.835423e-01   p_cons 2.316327e-04   p_joint 2.418367e-04

Joint ci ratio: 1.794627e-01	ci left: 2.204051e-04	ci right 2.643348e-04	k: 476	n:1970000
Cons ci ratio: 1.833485e-01	ci left: 2.107136e-04	ci right 2.537222e-04	k: 456	n:1970000
KS ci ratio: 2.886578e-03	ci left: 4.828090e-01	ci right 4.842052e-01	k: 952509	n:1970000
GLI2   1970000 perm   1892 sec   (1041 perm/sec)   p_kst 4.835071e-01   p_cons 2.314721e-04   p_joint 2.416244e-04

Joint ci ratio: 1.790877e-01	ci left: 2.202567e-04	ci right 2.640551e-04	k: 478	n:1980000
Cons ci ratio: 1.825513e-01	ci left: 2.115771e-04	ci right 2.545533e-04	k: 460	n:1980000
KS ci ratio: 2.879443e-03	ci left: 4.827825e-01	ci right 4.841751e-01	k: 957288	n:1980000
GLI2   1980000 perm   1909 sec   (1037 perm/sec)   p_kst 4.834788e-01   p_cons 2.323232e-04   p_joint 2.414141e-04

Joint ci ratio: 1.789011e-01	ci left: 2.196299e-04	ci right 2.632532e-04	k: 479	n:1990000
Cons ci ratio: 1.823537e-01	ci left: 2.109935e-04	ci right 2.537996e-04	k: 461	n:1990000
KS ci ratio: 2.872196e-03	ci left: 4.827849e-01	ci right 4.841740e-01	k: 962124	n:1990000
GLI2   1990000 perm   1926 sec   (1033 perm/sec)   p_kst 4.834794e-01   p_cons 2.316583e-04   p_joint 2.407035e-04

Joint ci ratio: 1.787151e-01	ci left: 2.190093e-04	ci right 2.624593e-04	k: 480	n:2000000
Cons ci ratio: 1.819603e-01	ci left: 2.108929e-04	ci right 2.535762e-04	k: 463	n:2000000
KS ci ratio: 2.864945e-03	ci left: 4.827972e-01	ci right 4.841828e-01	k: 966980	n:2000000
GLI2   2000000 perm   1943 sec   (1030 perm/sec)   p_kst 4.834900e-01   p_cons 2.315000e-04   p_joint 2.400000e-04

Joint ci ratio: 1.779765e-01	ci left: 2.198210e-04	ci right 2.632323e-04	k: 484	n:2010000
Cons ci ratio: 1.817646e-01	ci left: 2.103186e-04	ci right 2.528347e-04	k: 464	n:2010000
KS ci ratio: 2.858040e-03	ci left: 4.827587e-01	ci right 4.841409e-01	k: 971734	n:2010000
GLI2   2010000 perm   1960 sec   (1025 perm/sec)   p_kst 4.834498e-01   p_cons 2.308458e-04   p_joint 2.407960e-04

Joint ci ratio: 1.777934e-01	ci left: 2.192057e-04	ci right 2.624463e-04	k: 485	n:2020000
Cons ci ratio: 1.811810e-01	ci left: 2.106951e-04	ci right 2.531356e-04	k: 467	n:2020000
KS ci ratio: 2.851111e-03	ci left: 4.827334e-01	ci right 4.841122e-01	k: 976514	n:2020000
GLI2   2020000 perm   1978 sec   (1021 perm/sec)   p_kst 4.834228e-01   p_cons 2.311881e-04   p_joint 2.400990e-04

Joint ci ratio: 1.776108e-01	ci left: 2.185966e-04	ci right 2.616680e-04	k: 486	n:2030000
Cons ci ratio: 1.811811e-01	ci left: 2.096572e-04	ci right 2.518887e-04	k: 467	n:2030000
KS ci ratio: 2.843923e-03	ci left: 4.827626e-01	ci right 4.841380e-01	k: 981404	n:2030000
GLI2   2030000 perm   1995 sec   (1017 perm/sec)   p_kst 4.834502e-01   p_cons 2.300493e-04   p_joint 2.394089e-04

Joint ci ratio: 1.772472e-01	ci left: 2.184619e-04	ci right 2.614092e-04	k: 488	n:2040000
Cons ci ratio: 1.811812e-01	ci left: 2.086294e-04	ci right 2.506539e-04	k: 467	n:2040000
KS ci ratio: 2.836868e-03	ci left: 4.827778e-01	ci right 4.841497e-01	k: 986266	n:2040000
GLI2   2040000 perm   2013 sec   (1014 perm/sec)   p_kst 4.834637e-01   p_cons 2.289216e-04   p_joint 2.392157e-04

Joint ci ratio: 1.768859e-01	ci left: 2.183286e-04	ci right 2.611528e-04	k: 490	n:2050000
Cons ci ratio: 1.802210e-01	ci left: 2.099404e-04	ci right 2.519804e-04	k: 472	n:2050000
KS ci ratio: 2.829754e-03	ci left: 4.828123e-01	ci right 4.841809e-01	k: 991168	n:2050000
GLI2   2050000 perm   2030 sec   (1010 perm/sec)   p_kst 4.834966e-01   p_cons 2.302439e-04   p_joint 2.390244e-04

Joint ci ratio: 1.765268e-01	ci left: 2.181967e-04	ci right 2.608988e-04	k: 492	n:2060000
Cons ci ratio: 1.800308e-01	ci left: 2.093848e-04	ci right 2.512645e-04	k: 473	n:2060000
KS ci ratio: 2.822784e-03	ci left: 4.828305e-01	ci right 4.841958e-01	k: 996037	n:2060000
GLI2   2060000 perm   2047 sec   (1006 perm/sec)   p_kst 4.835131e-01   p_cons 2.296117e-04   p_joint 2.388350e-04

Joint ci ratio: 1.761698e-01	ci left: 2.180661e-04	ci right 2.606472e-04	k: 494	n:2070000
Cons ci ratio: 1.798413e-01	ci left: 2.088346e-04	ci right 2.505555e-04	k: 474	n:2070000
KS ci ratio: 2.815928e-03	ci left: 4.828374e-01	ci right 4.841994e-01	k: 1000883	n:2070000
GLI2   2070000 perm   2065 sec   (1002 perm/sec)   p_kst 4.835184e-01   p_cons 2.289855e-04   p_joint 2.386473e-04

Joint ci ratio: 1.758150e-01	ci left: 2.179369e-04	ci right 2.603980e-04	k: 496	n:2080000
Cons ci ratio: 1.792760e-01	ci left: 2.092081e-04	ci right 2.508580e-04	k: 477	n:2080000
KS ci ratio: 2.809243e-03	ci left: 4.828226e-01	ci right 4.841813e-01	k: 1005684	n:2080000
GLI2   2080000 perm   2082 sec   (999 perm/sec)   p_kst 4.835019e-01   p_cons 2.293269e-04   p_joint 2.384615e-04

Joint ci ratio: 1.751117e-01	ci left: 2.187240e-04	ci right 2.611499e-04	k: 500	n:2090000
Cons ci ratio: 1.790888e-01	ci left: 2.086641e-04	ci right 2.501576e-04	k: 478	n:2090000
KS ci ratio: 2.802517e-03	ci left: 4.828237e-01	ci right 4.841792e-01	k: 1010518	n:2090000
GLI2   2090000 perm   2100 sec   (995 perm/sec)   p_kst 4.835014e-01   p_cons 2.287081e-04   p_joint 2.392344e-04

Joint ci ratio: 1.747632e-01	ci left: 2.185931e-04	ci right 2.609004e-04	k: 502	n:2100000
Cons ci ratio: 1.785306e-01	ci left: 2.090351e-04	ci right 2.504588e-04	k: 481	n:2100000
KS ci ratio: 2.795621e-03	ci left: 4.828639e-01	ci right 4.842161e-01	k: 1015434	n:2100000
GLI2   2100000 perm   2117 sec   (992 perm/sec)   p_kst 4.835400e-01   p_cons 2.290476e-04   p_joint 2.390476e-04

Joint ci ratio: 1.747633e-01	ci left: 2.175571e-04	ci right 2.596639e-04	k: 502	n:2110000
Cons ci ratio: 1.785307e-01	ci left: 2.080444e-04	ci right 2.492718e-04	k: 481	n:2110000
KS ci ratio: 2.789039e-03	ci left: 4.828563e-01	ci right 4.842053e-01	k: 1020250	n:2110000
GLI2   2110000 perm   2134 sec   (989 perm/sec)   p_kst 4.835308e-01   p_cons 2.279621e-04   p_joint 2.379147e-04

Joint ci ratio: 1.744169e-01	ci left: 2.174331e-04	ci right 2.594236e-04	k: 504	n:2120000
Cons ci ratio: 1.781614e-01	ci left: 2.079644e-04	ci right 2.490815e-04	k: 483	n:2120000
KS ci ratio: 2.782447e-03	ci left: 4.828592e-01	ci right 4.842050e-01	k: 1025088	n:2120000
GLI2   2120000 perm   2152 sec   (985 perm/sec)   p_kst 4.835321e-01   p_cons 2.278302e-04   p_joint 2.377358e-04

Joint ci ratio: 1.739011e-01	ci left: 2.177593e-04	ci right 2.596755e-04	k: 507	n:2130000
Cons ci ratio: 1.770671e-01	ci left: 2.096797e-04	ci right 2.508541e-04	k: 489	n:2130000
KS ci ratio: 2.775973e-03	ci left: 4.828489e-01	ci right 4.841916e-01	k: 1029898	n:2130000
GLI2   2130000 perm   2169 sec   (982 perm/sec)   p_kst 4.835202e-01   p_cons 2.295775e-04   p_joint 2.380282e-04

Joint ci ratio: 1.733898e-01	ci left: 2.180827e-04	ci right 2.599248e-04	k: 510	n:2140000
Cons ci ratio: 1.765275e-01	ci left: 2.100397e-04	ci right 2.511457e-04	k: 492	n:2140000
KS ci ratio: 2.769569e-03	ci left: 4.828345e-01	ci right 4.841740e-01	k: 1034699	n:2140000
GLI2   2140000 perm   2187 sec   (978 perm/sec)   p_kst 4.835042e-01   p_cons 2.299065e-04   p_joint 2.383178e-04

Joint ci ratio: 1.727151e-01	ci left: 2.188483e-04	ci right 2.606568e-04	k: 514	n:2150000
Cons ci ratio: 1.756390e-01	ci left: 2.112859e-04	ci right 2.524056e-04	k: 497	n:2150000
KS ci ratio: 2.763282e-03	ci left: 4.828067e-01	ci right 4.841431e-01	k: 1039471	n:2150000
GLI2   2150000 perm   2205 sec   (975 perm/sec)   p_kst 4.834749e-01   p_cons 2.311628e-04   p_joint 2.390698e-04

Joint ci ratio: 1.723807e-01	ci left: 2.187210e-04	ci right 2.604159e-04	k: 516	n:2160000
Cons ci ratio: 1.751123e-01	ci left: 2.116357e-04	ci right 2.526868e-04	k: 500	n:2160000
KS ci ratio: 2.756863e-03	ci left: 4.828111e-01	ci right 4.841445e-01	k: 1044312	n:2160000
GLI2   2160000 perm   2223 sec   (972 perm/sec)   p_kst 4.834778e-01   p_cons 2.314815e-04   p_joint 2.388889e-04

Joint ci ratio: 1.720483e-01	ci left: 2.185950e-04	ci right 2.601772e-04	k: 518	n:2170000
Cons ci ratio: 1.747639e-01	ci left: 2.115417e-04	ci right 2.524843e-04	k: 502	n:2170000
KS ci ratio: 2.750601e-03	ci left: 4.827948e-01	ci right 4.841251e-01	k: 1049108	n:2170000
GLI2   2170000 perm   2241 sec   (968 perm/sec)   p_kst 4.834599e-01   p_cons 2.313364e-04   p_joint 2.387097e-04

Joint ci ratio: 1.712254e-01	ci left: 2.197874e-04	ci right 2.613757e-04	k: 523	n:2180000
Cons ci ratio: 1.744175e-01	ci left: 2.114486e-04	ci right 2.522836e-04	k: 504	n:2180000
KS ci ratio: 2.744617e-03	ci left: 4.827360e-01	ci right 4.840632e-01	k: 1053811	n:2180000
GLI2   2180000 perm   2259 sec   (965 perm/sec)   p_kst 4.833995e-01   p_cons 2.311927e-04   p_joint 2.399083e-04

Joint ci ratio: 1.710623e-01	ci left: 2.192208e-04	ci right 2.606584e-04	k: 524	n:2190000
Cons ci ratio: 1.740731e-01	ci left: 2.113565e-04	ci right 2.520847e-04	k: 506	n:2190000
KS ci ratio: 2.738159e-03	ci left: 4.827713e-01	ci right 4.840954e-01	k: 1058719	n:2190000
GLI2   2190000 perm   2277 sec   (962 perm/sec)   p_kst 4.834333e-01   p_cons 2.310502e-04   p_joint 2.392694e-04

Joint ci ratio: 1.710624e-01	ci left: 2.182244e-04	ci right 2.594736e-04	k: 524	n:2200000
Cons ci ratio: 1.740732e-01	ci left: 2.103958e-04	ci right 2.509388e-04	k: 506	n:2200000
KS ci ratio: 2.731870e-03	ci left: 4.827835e-01	ci right 4.841047e-01	k: 1063577	n:2200000
GLI2   2200000 perm   2296 sec   (958 perm/sec)   p_kst 4.834441e-01   p_cons 2.300000e-04   p_joint 2.381818e-04

Joint ci ratio: 1.704143e-01	ci left: 2.189695e-04	ci right 2.601867e-04	k: 528	n:2210000
Cons ci ratio: 1.739018e-01	ci left: 2.098766e-04	ci right 2.502756e-04	k: 507	n:2210000
KS ci ratio: 2.725801e-03	ci left: 4.827631e-01	ci right 4.840813e-01	k: 1068363	n:2210000
GLI2   2210000 perm   2315 sec   (955 perm/sec)   p_kst 4.834222e-01   p_cons 2.294118e-04   p_joint 2.389140e-04

Joint ci ratio: 1.702536e-01	ci left: 2.184144e-04	ci right 2.594843e-04	k: 529	n:2220000
Cons ci ratio: 1.737310e-01	ci left: 2.093620e-04	ci right 2.496182e-04	k: 508	n:2220000
KS ci ratio: 2.719683e-03	ci left: 4.827596e-01	ci right 4.840747e-01	k: 1073186	n:2220000
GLI2   2220000 perm   2333 sec   (951 perm/sec)   p_kst 4.834171e-01   p_cons 2.288288e-04   p_joint 2.382883e-04

Joint ci ratio: 1.700932e-01	ci left: 2.178643e-04	ci right 2.587882e-04	k: 530	n:2230000
Cons ci ratio: 1.735606e-01	ci left: 2.088521e-04	ci right 2.489668e-04	k: 509	n:2230000
KS ci ratio: 2.713652e-03	ci left: 4.827475e-01	ci right 4.840597e-01	k: 1077990	n:2230000
GLI2   2230000 perm   2352 sec   (948 perm/sec)   p_kst 4.834036e-01   p_cons 2.282511e-04   p_joint 2.376682e-04

Joint ci ratio: 1.697738e-01	ci left: 2.177466e-04	ci right 2.585637e-04	k: 532	n:2240000
Cons ci ratio: 1.733908e-01	ci left: 2.083468e-04	ci right 2.483211e-04	k: 510	n:2240000
KS ci ratio: 2.707537e-03	ci left: 4.827583e-01	ci right 4.840676e-01	k: 1082845	n:2240000
GLI2   2240000 perm   2371 sec   (945 perm/sec)   p_kst 4.834129e-01   p_cons 2.276786e-04   p_joint 2.375000e-04

Joint ci ratio: 1.689830e-01	ci left: 2.189069e-04	ci right 2.597309e-04	k: 537	n:2250000
Cons ci ratio: 1.728840e-01	ci left: 2.086964e-04	ci right 2.486085e-04	k: 513	n:2250000
KS ci ratio: 2.701386e-03	ci left: 4.827833e-01	ci right 4.840897e-01	k: 1087732	n:2250000
GLI2   2250000 perm   2389 sec   (942 perm/sec)   p_kst 4.834364e-01   p_cons 2.280000e-04   p_joint 2.386667e-04

Joint ci ratio: 1.686697e-01	ci left: 2.187858e-04	ci right 2.595039e-04	k: 539	n:2260000
Cons ci ratio: 1.727161e-01	ci left: 2.081963e-04	ci right 2.479701e-04	k: 514	n:2260000
KS ci ratio: 2.695523e-03	ci left: 4.827624e-01	ci right 4.840659e-01	k: 1092516	n:2260000
GLI2   2260000 perm   2409 sec   (938 perm/sec)   p_kst 4.834142e-01   p_cons 2.274336e-04   p_joint 2.384956e-04

Joint ci ratio: 1.683583e-01	ci left: 2.186659e-04	ci right 2.592789e-04	k: 541	n:2270000
Cons ci ratio: 1.720492e-01	ci left: 2.089652e-04	ci right 2.487157e-04	k: 518	n:2270000
KS ci ratio: 2.689774e-03	ci left: 4.827277e-01	ci right 4.840283e-01	k: 1097268	n:2270000
GLI2   2270000 perm   2429 sec   (934 perm/sec)   p_kst 4.833780e-01   p_cons 2.281938e-04   p_joint 2.383260e-04

Joint ci ratio: 1.678942e-01	ci left: 2.189673e-04	ci right 2.595128e-04	k: 544	n:2280000
Cons ci ratio: 1.718837e-01	ci left: 2.084684e-04	ci right 2.480823e-04	k: 519	n:2280000
KS ci ratio: 2.683918e-03	ci left: 4.827200e-01	ci right 4.840177e-01	k: 1102081	n:2280000
GLI2   2280000 perm   2449 sec   (931 perm/sec)   p_kst 4.833689e-01   p_cons 2.276316e-04   p_joint 2.385965e-04

Joint ci ratio: 1.675870e-01	ci left: 2.188478e-04	ci right 2.592896e-04	k: 546	n:2290000
Cons ci ratio: 1.713900e-01	ci left: 2.088118e-04	ci right 2.483653e-04	k: 522	n:2290000
KS ci ratio: 2.678093e-03	ci left: 4.827137e-01	ci right 4.840086e-01	k: 1106897	n:2290000
GLI2   2290000 perm   2469 sec   (928 perm/sec)   p_kst 4.833611e-01   p_cons 2.279476e-04   p_joint 2.384279e-04

Joint ci ratio: 1.754642e-01	ci left: 1.979219e-04	ci right 2.363983e-04	k: 498	n:2300000
Cons ci ratio: 1.709005e-01	ci left: 2.091524e-04	ci right 2.486456e-04	k: 525	n:2300000
KS ci ratio: 2.672371e-03	ci left: 4.826953e-01	ci right 4.839874e-01	k: 1111685	n:2300000
GLI2   2300000 perm   2488 sec   (924 perm/sec)   p_kst 4.833413e-01   p_cons 2.282609e-04   p_joint 2.165217e-04

Joint ci ratio: 1.747651e-01	ci left: 1.987209e-04	ci right 2.371824e-04	k: 502	n:2310000
Cons ci ratio: 1.705766e-01	ci left: 2.090758e-04	ci right 2.484720e-04	k: 527	n:2310000
KS ci ratio: 2.666551e-03	ci left: 4.827021e-01	ci right 4.839914e-01	k: 1116531	n:2310000
GLI2   2310000 perm   2507 sec   (921 perm/sec)   p_kst 4.833468e-01   p_cons 2.281385e-04   p_joint 2.173160e-04

Joint ci ratio: 1.745917e-01	ci left: 1.982765e-04	ci right 2.366099e-04	k: 503	n:2320000
Cons ci ratio: 1.702544e-01	ci left: 2.089999e-04	ci right 2.482998e-04	k: 529	n:2320000
KS ci ratio: 2.660946e-03	ci left: 4.826757e-01	ci right 4.839622e-01	k: 1121300	n:2320000
GLI2   2320000 perm   2526 sec   (918 perm/sec)   p_kst 4.833190e-01   p_cons 2.280172e-04   p_joint 2.168103e-04

Joint ci ratio: 1.745918e-01	ci left: 1.974255e-04	ci right 2.355944e-04	k: 503	n:2330000
Cons ci ratio: 1.700941e-01	ci left: 2.085138e-04	ci right 2.476816e-04	k: 530	n:2330000
KS ci ratio: 2.655157e-03	ci left: 4.826908e-01	ci right 4.839745e-01	k: 1126165	n:2330000
GLI2   2330000 perm   2546 sec   (915 perm/sec)   p_kst 4.833326e-01   p_cons 2.274678e-04   p_joint 2.158798e-04

Joint ci ratio: 1.837545e-01	ci left: 1.765800e-04	ci right 2.127102e-04	k: 454	n:2340000
Cons ci ratio: 1.696156e-01	ci left: 2.088503e-04	ci right 2.479596e-04	k: 533	n:2340000
KS ci ratio: 2.649640e-03	ci left: 4.826617e-01	ci right 4.839426e-01	k: 1130927	n:2340000
GLI2   2340000 perm   2566 sec   (912 perm/sec)   p_kst 4.833021e-01   p_cons 2.277778e-04   p_joint 1.940171e-04

Joint ci ratio: 1.833520e-01	ci left: 1.766405e-04	ci right 2.126951e-04	k: 456	n:2350000
Cons ci ratio: 1.696157e-01	ci left: 2.079616e-04	ci right 2.469045e-04	k: 533	n:2350000
KS ci ratio: 2.643870e-03	ci left: 4.826869e-01	ci right 4.839651e-01	k: 1135816	n:2350000
GLI2   2350000 perm   2585 sec   (909 perm/sec)   p_kst 4.833260e-01   p_cons 2.268085e-04   p_joint 1.940426e-04

Joint ci ratio: 1.831518e-01	ci left: 1.762963e-04	ci right 2.122370e-04	k: 457	n:2360000
Cons ci ratio: 1.692989e-01	ci left: 2.078919e-04	ci right 2.467416e-04	k: 535	n:2360000
KS ci ratio: 2.638236e-03	ci left: 4.826932e-01	ci right 4.839687e-01	k: 1140661	n:2360000
GLI2   2360000 perm   2605 sec   (906 perm/sec)   p_kst 4.833309e-01   p_cons 2.266949e-04   p_joint 1.936441e-04

Joint ci ratio: 1.823571e-01	ci left: 1.771630e-04	ci right 2.131064e-04	k: 461	n:2370000
Cons ci ratio: 1.689840e-01	ci left: 2.078229e-04	ci right 2.465801e-04	k: 537	n:2370000
KS ci ratio: 2.632696e-03	ci left: 4.826885e-01	ci right 4.839613e-01	k: 1145480	n:2370000
GLI2   2370000 perm   2625 sec   (903 perm/sec)   p_kst 4.833249e-01   p_cons 2.265823e-04   p_joint 1.945148e-04

Joint ci ratio: 1.817678e-01	ci left: 1.776217e-04	ci right 2.135289e-04	k: 464	n:2380000
Cons ci ratio: 1.685148e-01	ci left: 2.081569e-04	ci right 2.468577e-04	k: 540	n:2380000
KS ci ratio: 2.626968e-03	ci left: 4.827263e-01	ci right 4.839965e-01	k: 1150400	n:2380000
GLI2   2380000 perm   2645 sec   (900 perm/sec)   p_kst 4.833613e-01   p_cons 2.268908e-04   p_joint 1.949580e-04

Joint ci ratio: 1.813782e-01	ci left: 1.776773e-04	ci right 2.135103e-04	k: 466	n:2390000
Cons ci ratio: 1.682042e-01	ci left: 2.080875e-04	ci right 2.466969e-04	k: 542	n:2390000
KS ci ratio: 2.621584e-03	ci left: 4.827052e-01	ci right 4.839727e-01	k: 1155180	n:2390000
GLI2   2390000 perm   2665 sec   (897 perm/sec)   p_kst 4.833389e-01   p_cons 2.267782e-04   p_joint 1.949791e-04

Joint ci ratio: 1.813783e-01	ci left: 1.769370e-04	ci right 2.126206e-04	k: 466	n:2400000
Cons ci ratio: 1.677414e-01	ci left: 2.084180e-04	ci right 2.469715e-04	k: 545	n:2400000
KS ci ratio: 2.616105e-03	ci left: 4.827088e-01	ci right 4.839737e-01	k: 1160019	n:2400000
GLI2   2400000 perm   2685 sec   (894 perm/sec)   p_kst 4.833413e-01   p_cons 2.270833e-04   p_joint 1.941667e-04

Joint ci ratio: 1.807984e-01	ci left: 1.773912e-04	ci right 2.130396e-04	k: 469	n:2410000
Cons ci ratio: 1.671303e-01	ci left: 2.091434e-04	ci right 2.476759e-04	k: 549	n:2410000
KS ci ratio: 2.610696e-03	ci left: 4.827054e-01	ci right 4.839677e-01	k: 1164841	n:2410000
GLI2   2410000 perm   2705 sec   (891 perm/sec)   p_kst 4.833365e-01   p_cons 2.278008e-04   p_joint 1.946058e-04

Joint ci ratio: 1.806065e-01	ci left: 1.770527e-04	ci right 2.125911e-04	k: 470	n:2420000
Cons ci ratio: 1.669786e-01	ci left: 2.086751e-04	ci right 2.470830e-04	k: 550	n:2420000
KS ci ratio: 2.605349e-03	ci left: 4.826967e-01	ci right 4.839563e-01	k: 1169650	n:2420000
GLI2   2420000 perm   2725 sec   (888 perm/sec)   p_kst 4.833264e-01   p_cons 2.272727e-04   p_joint 1.942149e-04

Joint ci ratio: 1.804151e-01	ci left: 1.767170e-04	ci right 2.121464e-04	k: 471	n:2430000
Cons ci ratio: 1.668273e-01	ci left: 2.082107e-04	ci right 2.464949e-04	k: 551	n:2430000
KS ci ratio: 2.600003e-03	ci left: 4.826941e-01	ci right 4.839512e-01	k: 1174474	n:2430000
GLI2   2430000 perm   2745 sec   (885 perm/sec)   p_kst 4.833226e-01   p_cons 2.267490e-04   p_joint 1.938272e-04

Joint ci ratio: 1.700950e-01	ci left: 1.991135e-04	ci right 2.365157e-04	k: 530	n:2440000
Cons ci ratio: 1.659278e-01	ci left: 2.097140e-04	ci right 2.480459e-04	k: 557	n:2440000
KS ci ratio: 2.594691e-03	ci left: 4.826912e-01	ci right 4.839457e-01	k: 1179297	n:2440000
GLI2   2440000 perm   2766 sec   (882 perm/sec)   p_kst 4.833184e-01   p_cons 2.282787e-04   p_joint 2.172131e-04

Joint ci ratio: 1.511965e-01	ci left: 2.535468e-04	ci right 2.954044e-04	k: 671	n:2450000
Cons ci ratio: 1.656313e-01	ci left: 2.096405e-04	ci right 2.478837e-04	k: 559	n:2450000
KS ci ratio: 2.589306e-03	ci left: 4.827088e-01	ci right 4.839607e-01	k: 1184170	n:2450000
GLI2   2450000 perm   2787 sec   (879 perm/sec)   p_kst 4.833347e-01   p_cons 2.281633e-04   p_joint 2.738776e-04

Joint ci ratio: 1.507485e-01	ci left: 2.540807e-04	ci right 2.958909e-04	k: 675	n:2460000
Cons ci ratio: 1.654836e-01	ci left: 2.091779e-04	ci right 2.472993e-04	k: 560	n:2460000
KS ci ratio: 2.584009e-03	ci left: 4.827156e-01	ci right 4.839649e-01	k: 1189017	n:2460000
GLI2   2460000 perm   2807 sec   (876 perm/sec)   p_kst 4.833402e-01   p_cons 2.276423e-04   p_joint 2.743902e-04

Joint ci ratio: 1.499739e-01	ci left: 2.557794e-04	ci right 2.976335e-04	k: 682	n:2470000
Cons ci ratio: 1.643160e-01	ci left: 2.114363e-04	ci right 2.496705e-04	k: 568	n:2470000
KS ci ratio: 2.578770e-03	ci left: 4.827175e-01	ci right 4.839643e-01	k: 1193852	n:2470000
GLI2   2470000 perm   2828 sec   (873 perm/sec)   p_kst 4.833409e-01   p_cons 2.299595e-04   p_joint 2.761134e-04

Joint ci ratio: 1.466812e-01	ci left: 2.667843e-04	ci right 3.093968e-04	k: 713	n:2480000
Cons ci ratio: 1.638845e-01	ci left: 2.117437e-04	ci right 2.499231e-04	k: 571	n:2480000
KS ci ratio: 2.573483e-03	ci left: 4.827347e-01	ci right 4.839790e-01	k: 1198725	n:2480000
GLI2   2480000 perm   2848 sec   (871 perm/sec)   p_kst 4.833569e-01   p_cons 2.302419e-04   p_joint 2.875000e-04

Joint ci ratio: 1.465786e-01	ci left: 2.660998e-04	ci right 3.085705e-04	k: 714	n:2490000
Cons ci ratio: 1.635987e-01	ci left: 2.116637e-04	ci right 2.497555e-04	k: 573	n:2490000
KS ci ratio: 2.568417e-03	ci left: 4.827153e-01	ci right 4.839571e-01	k: 1203507	n:2490000
GLI2   2490000 perm   2869 sec   (868 perm/sec)   p_kst 4.833361e-01   p_cons 2.301205e-04   p_joint 2.867470e-04

Joint ci ratio: 1.462721e-01	ci left: 2.661914e-04	ci right 3.085802e-04	k: 717	n:2500000
Cons ci ratio: 1.633145e-01	ci left: 2.115843e-04	ci right 2.495892e-04	k: 575	n:2500000
KS ci ratio: 2.563114e-03	ci left: 4.827480e-01	ci right 4.839873e-01	k: 1208419	n:2500000
GLI2   2500000 perm   2890 sec   (865 perm/sec)   p_kst 4.833676e-01   p_cons 2.300000e-04   p_joint 2.868000e-04

Joint ci ratio: 1.464764e-01	ci left: 2.643632e-04	ci right 3.065248e-04	k: 715	n:2510000
Cons ci ratio: 1.630317e-01	ci left: 2.115056e-04	ci right 2.494241e-04	k: 577	n:2510000
KS ci ratio: 2.558047e-03	ci left: 4.827406e-01	ci right 4.839774e-01	k: 1213231	n:2510000
GLI2   2510000 perm   2910 sec   (862 perm/sec)   p_kst 4.833590e-01   p_cons 2.298805e-04   p_joint 2.848606e-04

Joint ci ratio: 1.461704e-01	ci left: 2.644611e-04	ci right 3.065425e-04	k: 718	n:2520000
Cons ci ratio: 1.628909e-01	ci left: 2.110469e-04	ci right 2.488473e-04	k: 578	n:2520000
KS ci ratio: 2.552937e-03	ci left: 4.827475e-01	ci right 4.839819e-01	k: 1218079	n:2520000
GLI2   2520000 perm   2931 sec   (860 perm/sec)   p_kst 4.833647e-01   p_cons 2.293651e-04   p_joint 2.849206e-04

Joint ci ratio: 1.461705e-01	ci left: 2.634158e-04	ci right 3.053309e-04	k: 718	n:2530000
Cons ci ratio: 1.621920e-01	ci left: 2.121086e-04	ci right 2.499203e-04	k: 583	n:2530000
KS ci ratio: 2.547836e-03	ci left: 4.827588e-01	ci right 4.839907e-01	k: 1222938	n:2530000
GLI2   2530000 perm   2952 sec   (857 perm/sec)   p_kst 4.833747e-01   p_cons 2.304348e-04   p_joint 2.837945e-04

Joint ci ratio: 1.458665e-01	ci left: 2.635166e-04	ci right 3.053530e-04	k: 721	n:2540000
Cons ci ratio: 1.621921e-01	ci left: 2.112736e-04	ci right 2.489364e-04	k: 583	n:2540000
KS ci ratio: 2.543035e-03	ci left: 4.827168e-01	ci right 4.839463e-01	k: 1227662	n:2540000
GLI2   2540000 perm   2973 sec   (854 perm/sec)   p_kst 4.833315e-01   p_cons 2.295276e-04   p_joint 2.838583e-04

Joint ci ratio: 1.455644e-01	ci left: 2.636168e-04	ci right 3.053749e-04	k: 724	n:2550000
Cons ci ratio: 1.615021e-01	ci left: 2.123264e-04	ci right 2.500003e-04	k: 588	n:2550000
KS ci ratio: 2.538063e-03	ci left: 4.827143e-01	ci right 4.839414e-01	k: 1232486	n:2550000
GLI2   2550000 perm   2994 sec   (852 perm/sec)   p_kst 4.833278e-01   p_cons 2.305882e-04   p_joint 2.839216e-04

Joint ci ratio: 1.452642e-01	ci left: 2.637163e-04	ci right 3.053965e-04	k: 727	n:2560000
Cons ci ratio: 1.613652e-01	ci left: 2.118719e-04	ci right 2.494301e-04	k: 589	n:2560000
KS ci ratio: 2.533046e-03	ci left: 4.827263e-01	ci right 4.839510e-01	k: 1237347	n:2560000
GLI2   2560000 perm   3015 sec   (849 perm/sec)   p_kst 4.833387e-01   p_cons 2.300781e-04   p_joint 2.839844e-04

Joint ci ratio: 1.445707e-01	ci left: 2.653152e-04	ci right 3.070306e-04	k: 734	n:2570000
Cons ci ratio: 1.606857e-01	ci left: 2.129146e-04	ci right 2.504834e-04	k: 594	n:2570000
KS ci ratio: 2.528056e-03	ci left: 4.827387e-01	ci right 4.839610e-01	k: 1242209	n:2570000
GLI2   2570000 perm   3036 sec   (846 perm/sec)   p_kst 4.833498e-01   p_cons 2.311284e-04   p_joint 2.856031e-04

Joint ci ratio: 1.444725e-01	ci left: 2.646604e-04	ci right 3.062422e-04	k: 735	n:2580000
Cons ci ratio: 1.605509e-01	ci left: 2.124614e-04	ci right 2.499157e-04	k: 595	n:2580000
KS ci ratio: 2.523067e-03	ci left: 4.827567e-01	ci right 4.839767e-01	k: 1247086	n:2580000
GLI2   2580000 perm   3058 sec   (844 perm/sec)   p_kst 4.833667e-01   p_cons 2.306202e-04   p_joint 2.848837e-04

Joint ci ratio: 1.443745e-01	ci left: 2.640107e-04	ci right 3.054598e-04	k: 736	n:2590000
Cons ci ratio: 1.600148e-01	ci left: 2.131235e-04	ci right 2.505571e-04	k: 599	n:2590000
KS ci ratio: 2.518098e-03	ci left: 4.827766e-01	ci right 4.839941e-01	k: 1251968	n:2590000
GLI2   2590000 perm   3079 sec   (841 perm/sec)   p_kst 4.833853e-01   p_cons 2.312741e-04   p_joint 2.841699e-04

Joint ci ratio: 1.440815e-01	ci left: 2.641075e-04	ci right 3.054804e-04	k: 739	n:2600000
Cons ci ratio: 1.596162e-01	ci left: 2.134115e-04	ci right 2.507934e-04	k: 602	n:2600000
KS ci ratio: 2.513331e-03	ci left: 4.827616e-01	ci right 4.839769e-01	k: 1256760	n:2600000
GLI2   2600000 perm   3100 sec   (839 perm/sec)   p_kst 4.833692e-01   p_cons 2.315385e-04   p_joint 2.842308e-04

Joint ci ratio: 1.436937e-01	ci left: 2.645730e-04	ci right 3.058977e-04	k: 743	n:2610000
Cons ci ratio: 1.592206e-01	ci left: 2.136974e-04	ci right 2.510277e-04	k: 605	n:2610000
KS ci ratio: 2.508561e-03	ci left: 4.827530e-01	ci right 4.839659e-01	k: 1261568	n:2610000
GLI2   2610000 perm   3122 sec   (836 perm/sec)   p_kst 4.833594e-01   p_cons 2.318008e-04   p_joint 2.846743e-04

Joint ci ratio: 1.433089e-01	ci left: 2.650350e-04	ci right 3.063116e-04	k: 747	n:2620000
Cons ci ratio: 1.588279e-01	ci left: 2.139812e-04	ci right 2.512602e-04	k: 608	n:2620000
KS ci ratio: 2.503773e-03	ci left: 4.827535e-01	ci right 4.839641e-01	k: 1266400	n:2620000
GLI2   2620000 perm   3144 sec   (833 perm/sec)   p_kst 4.833588e-01   p_cons 2.320611e-04   p_joint 2.851145e-04

Joint ci ratio: 1.371221e-01	ci left: 2.893434e-04	ci right 3.323017e-04	k: 816	n:2630000
Cons ci ratio: 1.579228e-01	ci left: 2.157238e-04	ci right 2.530718e-04	k: 615	n:2630000
KS ci ratio: 2.499215e-03	ci left: 4.827134e-01	ci right 4.839216e-01	k: 1271125	n:2630000
GLI2   2630000 perm   3166 sec   (831 perm/sec)   p_kst 4.833175e-01   p_cons 2.338403e-04   p_joint 3.102662e-04

Joint ci ratio: 1.423603e-01	ci left: 2.666797e-04	ci right 3.079142e-04	k: 757	n:2640000
Cons ci ratio: 1.574125e-01	ci left: 2.163620e-04	ci right 2.536880e-04	k: 619	n:2640000
KS ci ratio: 2.494589e-03	ci left: 4.826921e-01	ci right 4.838981e-01	k: 1275899	n:2640000
GLI2   2640000 perm   3188 sec   (828 perm/sec)   p_kst 4.832951e-01   p_cons 2.344697e-04   p_joint 2.867424e-04

Joint ci ratio: 1.419862e-01	ci left: 2.671291e-04	ci right 3.083154e-04	k: 761	n:2650000
Cons ci ratio: 1.570330e-01	ci left: 2.166331e-04	ci right 2.539073e-04	k: 622	n:2650000
KS ci ratio: 2.489853e-03	ci left: 4.826982e-01	ci right 4.839019e-01	k: 1280745	n:2650000
GLI2   2650000 perm   3210 sec   (826 perm/sec)   p_kst 4.833000e-01   p_cons 2.347170e-04   p_joint 2.871698e-04

Joint ci ratio: 1.417075e-01	ci left: 2.672127e-04	ci right 3.083241e-04	k: 764	n:2660000
Cons ci ratio: 1.567815e-01	ci left: 2.165410e-04	ci right 2.537341e-04	k: 624	n:2660000
KS ci ratio: 2.485086e-03	ci left: 4.827158e-01	ci right 4.839173e-01	k: 1285622	n:2660000
GLI2   2660000 perm   3231 sec   (823 perm/sec)   p_kst 4.833165e-01   p_cons 2.345865e-04   p_joint 2.872180e-04

Joint ci ratio: 1.413384e-01	ci left: 2.676570e-04	ci right 3.087205e-04	k: 768	n:2670000
Cons ci ratio: 1.565313e-01	ci left: 2.164497e-04	ci right 2.535622e-04	k: 626	n:2670000
KS ci ratio: 2.480423e-03	ci left: 4.827180e-01	ci right 4.839172e-01	k: 1290458	n:2670000
GLI2   2670000 perm   3253 sec   (821 perm/sec)   p_kst 4.833176e-01   p_cons 2.344569e-04   p_joint 2.876404e-04

Joint ci ratio: 1.408811e-01	ci left: 2.684581e-04	ci right 3.095000e-04	k: 773	n:2680000
Cons ci ratio: 1.564067e-01	ci left: 2.160006e-04	ci right 2.530038e-04	k: 627	n:2680000
KS ci ratio: 2.475878e-03	ci left: 4.827015e-01	ci right 4.838985e-01	k: 1295244	n:2680000
GLI2   2680000 perm   3275 sec   (818 perm/sec)   p_kst 4.833000e-01   p_cons 2.339552e-04   p_joint 2.884328e-04

Joint ci ratio: 1.406089e-01	ci left: 2.685361e-04	ci right 3.095039e-04	k: 776	n:2690000
Cons ci ratio: 1.561582e-01	ci left: 2.159120e-04	ci right 2.528359e-04	k: 629	n:2690000
KS ci ratio: 2.471128e-03	ci left: 4.827317e-01	ci right 4.839264e-01	k: 1300155	n:2690000
GLI2   2690000 perm   3297 sec   (816 perm/sec)   p_kst 4.833290e-01   p_cons 2.338290e-04   p_joint 2.884758e-04

Joint ci ratio: 1.403382e-01	ci left: 2.686136e-04	ci right 3.095078e-04	k: 779	n:2700000
Cons ci ratio: 1.560345e-01	ci left: 2.154683e-04	ci right 2.522843e-04	k: 630	n:2700000
KS ci ratio: 2.466651e-03	ci left: 4.827119e-01	ci right 4.839044e-01	k: 1304932	n:2700000
GLI2   2700000 perm   3319 sec   (813 perm/sec)   p_kst 4.833081e-01   p_cons 2.333333e-04   p_joint 2.885185e-04

Joint ci ratio: 1.401587e-01	ci left: 2.683345e-04	ci right 3.091296e-04	k: 781	n:2710000
Cons ci ratio: 1.555422e-01	ci left: 2.160916e-04	ci right 2.528868e-04	k: 634	n:2710000
KS ci ratio: 2.462072e-03	ci left: 4.827178e-01	ci right 4.839081e-01	k: 1309778	n:2710000
GLI2   2710000 perm   3342 sec   (811 perm/sec)   p_kst 4.833129e-01   p_cons 2.339483e-04   p_joint 2.881919e-04

Joint ci ratio: 1.400692e-01	ci left: 2.677027e-04	ci right 3.083736e-04	k: 782	n:2720000
Cons ci ratio: 1.555423e-01	ci left: 2.152972e-04	ci right 2.519571e-04	k: 634	n:2720000
KS ci ratio: 2.457562e-03	ci left: 4.827148e-01	ci right 4.839029e-01	k: 1314600	n:2720000
GLI2   2720000 perm   3364 sec   (809 perm/sec)   p_kst 4.833088e-01   p_cons 2.330882e-04   p_joint 2.875000e-04

Joint ci ratio: 1.398016e-01	ci left: 2.677825e-04	ci right 3.083814e-04	k: 785	n:2730000
Cons ci ratio: 1.554200e-01	ci left: 2.148606e-04	ci right 2.514147e-04	k: 635	n:2730000
KS ci ratio: 2.453136e-03	ci left: 4.826997e-01	ci right 4.838857e-01	k: 1319389	n:2730000
GLI2   2730000 perm   3387 sec   (806 perm/sec)   p_kst 4.832927e-01   p_cons 2.326007e-04   p_joint 2.875458e-04

Joint ci ratio: 1.397128e-01	ci left: 2.671574e-04	ci right 3.076336e-04	k: 786	n:2740000
Cons ci ratio: 1.551762e-01	ci left: 2.147780e-04	ci right 2.512554e-04	k: 637	n:2740000
KS ci ratio: 2.448845e-03	ci left: 4.826622e-01	ci right 4.838459e-01	k: 1324116	n:2740000
GLI2   2740000 perm   3408 sec   (804 perm/sec)   p_kst 4.832540e-01   p_cons 2.324818e-04   p_joint 2.868613e-04

Joint ci ratio: 1.392711e-01	ci left: 2.679407e-04	ci right 3.083965e-04	k: 791	n:2750000
Cons ci ratio: 1.546920e-01	ci left: 2.153951e-04	ci right 2.518526e-04	k: 641	n:2750000
KS ci ratio: 2.444514e-03	ci left: 4.826376e-01	ci right 4.838192e-01	k: 1328878	n:2750000
GLI2   2750000 perm   3431 sec   (801 perm/sec)   p_kst 4.832284e-01   p_cons 2.330909e-04   p_joint 2.876364e-04

Joint ci ratio: 1.387464e-01	ci left: 2.690682e-04	ci right 3.095286e-04	k: 797	n:2760000
Cons ci ratio: 1.542123e-01	ci left: 2.160080e-04	ci right 2.524454e-04	k: 645	n:2760000
KS ci ratio: 2.440134e-03	ci left: 4.826280e-01	ci right 4.838075e-01	k: 1333681	n:2760000
GLI2   2760000 perm   3455 sec   (799 perm/sec)   p_kst 4.832178e-01   p_cons 2.336957e-04   p_joint 2.887681e-04

Joint ci ratio: 1.383999e-01	ci left: 2.694908e-04	ci right 3.099052e-04	k: 801	n:2770000
Cons ci ratio: 1.539741e-01	ci left: 2.159224e-04	ci right 2.522839e-04	k: 647	n:2770000
KS ci ratio: 2.435632e-03	ci left: 4.826482e-01	ci right 4.838255e-01	k: 1338566	n:2770000
GLI2   2770000 perm   3478 sec   (796 perm/sec)   p_kst 4.832368e-01   p_cons 2.335740e-04   p_joint 2.891697e-04

Joint ci ratio: 1.380561e-01	ci left: 2.699105e-04	ci right 3.102790e-04	k: 805	n:2780000
Cons ci ratio: 1.536189e-01	ci left: 2.161833e-04	ci right 2.524970e-04	k: 650	n:2780000
KS ci ratio: 2.431268e-03	ci left: 4.826451e-01	ci right 4.838204e-01	k: 1343387	n:2780000
GLI2   2780000 perm   3501 sec   (794 perm/sec)   p_kst 4.832327e-01   p_cons 2.338129e-04   p_joint 2.895683e-04

Joint ci ratio: 1.377147e-01	ci left: 2.703273e-04	ci right 3.106500e-04	k: 809	n:2790000
Cons ci ratio: 1.533835e-01	ci left: 2.160977e-04	ci right 2.523363e-04	k: 652	n:2790000
KS ci ratio: 2.426864e-03	ci left: 4.826550e-01	ci right 4.838281e-01	k: 1348244	n:2790000
GLI2   2790000 perm   3524 sec   (792 perm/sec)   p_kst 4.832416e-01   p_cons 2.336918e-04   p_joint 2.899642e-04

Joint ci ratio: 1.376299e-01	ci left: 2.697067e-04	ci right 3.099100e-04	k: 810	n:2800000
Cons ci ratio: 1.530323e-01	ci left: 2.163563e-04	ci right 2.525476e-04	k: 655	n:2800000
KS ci ratio: 2.422598e-03	ci left: 4.826413e-01	ci right 4.838123e-01	k: 1353035	n:2800000
GLI2   2800000 perm   3546 sec   (790 perm/sec)   p_kst 4.832268e-01   p_cons 2.339286e-04   p_joint 2.892857e-04

Joint ci ratio: 1.375451e-01	ci left: 2.690905e-04	ci right 3.091753e-04	k: 811	n:2810000
Cons ci ratio: 1.526836e-01	ci left: 2.166131e-04	ci right 2.527573e-04	k: 658	n:2810000
KS ci ratio: 2.418222e-03	ci left: 4.826551e-01	ci right 4.838240e-01	k: 1357903	n:2810000
GLI2   2810000 perm   3569 sec   (787 perm/sec)   p_kst 4.832395e-01   p_cons 2.341637e-04   p_joint 2.886121e-04

Joint ci ratio: 1.372917e-01	ci left: 2.691636e-04	ci right 3.091793e-04	k: 814	n:2820000
Cons ci ratio: 1.525679e-01	ci left: 2.161861e-04	ci right 2.522291e-04	k: 659	n:2820000
KS ci ratio: 2.413828e-03	ci left: 4.826772e-01	ci right 4.838441e-01	k: 1362795	n:2820000
GLI2   2820000 perm   3592 sec   (785 perm/sec)   p_kst 4.832606e-01   p_cons 2.336879e-04   p_joint 2.886525e-04

Joint ci ratio: 1.370398e-01	ci left: 2.692361e-04	ci right 3.091832e-04	k: 817	n:2830000
Cons ci ratio: 1.523373e-01	ci left: 2.161019e-04	ci right 2.520715e-04	k: 661	n:2830000
KS ci ratio: 2.409561e-03	ci left: 4.826781e-01	ci right 4.838428e-01	k: 1367627	n:2830000
GLI2   2830000 perm   3615 sec   (783 perm/sec)   p_kst 4.832604e-01   p_cons 2.335689e-04   p_joint 2.886926e-04

Joint ci ratio: 1.362919e-01	ci left: 2.713488e-04	ci right 3.113718e-04	k: 826	n:2840000
Cons ci ratio: 1.517652e-01	ci left: 2.170346e-04	ci right 2.530114e-04	k: 666	n:2840000
KS ci ratio: 2.405348e-03	ci left: 4.826722e-01	ci right 4.838349e-01	k: 1372440	n:2840000
GLI2   2840000 perm   3639 sec   (780 perm/sec)   p_kst 4.832535e-01   p_cons 2.345070e-04   p_joint 2.908451e-04

Joint ci ratio: 1.361274e-01	ci left: 2.710746e-04	ci right 3.110049e-04	k: 828	n:2850000
Cons ci ratio: 1.514250e-01	ci left: 2.172858e-04	ci right 2.532162e-04	k: 669	n:2850000
KS ci ratio: 2.401024e-03	ci left: 4.826941e-01	ci right 4.838547e-01	k: 1377332	n:2850000
GLI2   2850000 perm   3663 sec   (778 perm/sec)   p_kst 4.832744e-01   p_cons 2.347368e-04   p_joint 2.905263e-04

Joint ci ratio: 1.360454e-01	ci left: 2.704645e-04	ci right 3.102790e-04	k: 829	n:2860000
Cons ci ratio: 1.514250e-01	ci left: 2.165260e-04	ci right 2.523308e-04	k: 669	n:2860000
KS ci ratio: 2.396816e-03	ci left: 4.826966e-01	ci right 4.838552e-01	k: 1382169	n:2860000
GLI2   2860000 perm   3686 sec   (776 perm/sec)   p_kst 4.832759e-01   p_cons 2.339161e-04   p_joint 2.898601e-04

Joint ci ratio: 1.358002e-01	ci left: 2.705319e-04	ci right 3.102787e-04	k: 832	n:2870000
Cons ci ratio: 1.510872e-01	ci left: 2.167773e-04	ci right 2.525365e-04	k: 672	n:2870000
KS ci ratio: 2.392681e-03	ci left: 4.826883e-01	ci right 4.838449e-01	k: 1386975	n:2870000
GLI2   2870000 perm   3710 sec   (774 perm/sec)   p_kst 4.832666e-01   p_cons 2.341463e-04   p_joint 2.898955e-04

Joint ci ratio: 1.357188e-01	ci left: 2.699279e-04	ci right 3.095604e-04	k: 833	n:2880000
Cons ci ratio: 1.508632e-01	ci left: 2.166928e-04	ci right 2.523803e-04	k: 674	n:2880000
KS ci ratio: 2.388667e-03	ci left: 4.826592e-01	ci right 4.838138e-01	k: 1391721	n:2880000
GLI2   2880000 perm   3734 sec   (771 perm/sec)   p_kst 4.832365e-01   p_cons 2.340278e-04   p_joint 2.892361e-04

Joint ci ratio: 1.355564e-01	ci left: 2.696625e-04	ci right 3.092048e-04	k: 835	n:2890000
Cons ci ratio: 1.501970e-01	ci left: 2.179410e-04	ci right 2.536612e-04	k: 680	n:2890000
KS ci ratio: 2.384449e-03	ci left: 4.826773e-01	ci right 4.838300e-01	k: 1396603	n:2890000
GLI2   2890000 perm   3757 sec   (769 perm/sec)   p_kst 4.832536e-01   p_cons 2.352941e-04   p_joint 2.889273e-04

Joint ci ratio: 1.353138e-01	ci left: 2.697320e-04	ci right 3.092081e-04	k: 838	n:2900000
Cons ci ratio: 1.497578e-01	ci left: 2.185170e-04	ci right 2.542175e-04	k: 684	n:2900000
KS ci ratio: 2.380348e-03	ci left: 4.826754e-01	ci right 4.838260e-01	k: 1401427	n:2900000
GLI2   2900000 perm   3781 sec   (767 perm/sec)   p_kst 4.832507e-01   p_cons 2.358621e-04   p_joint 2.889655e-04

Joint ci ratio: 1.350726e-01	ci left: 2.698012e-04	ci right 3.092113e-04	k: 841	n:2910000
Cons ci ratio: 1.495396e-01	ci left: 2.184276e-04	ci right 2.540569e-04	k: 686	n:2910000
KS ci ratio: 2.376325e-03	ci left: 4.826618e-01	ci right 4.838104e-01	k: 1406217	n:2910000
GLI2   2910000 perm   3806 sec   (765 perm/sec)   p_kst 4.832361e-01   p_cons 2.357388e-04   p_joint 2.890034e-04

Joint ci ratio: 1.347528e-01	ci left: 2.702008e-04	ci right 3.095684e-04	k: 845	n:2920000
Cons ci ratio: 1.492142e-01	ci left: 2.186686e-04	ci right 2.542527e-04	k: 689	n:2920000
KS ci ratio: 2.372484e-03	ci left: 4.826140e-01	ci right 4.837607e-01	k: 1410907	n:2920000
GLI2   2920000 perm   3830 sec   (763 perm/sec)   p_kst 4.831873e-01   p_cons 2.359589e-04   p_joint 2.893836e-04

Joint ci ratio: 1.346733e-01	ci left: 2.696084e-04	ci right 3.088646e-04	k: 846	n:2930000
Cons ci ratio: 1.491062e-01	ci left: 2.182508e-04	ci right 2.537389e-04	k: 690	n:2930000
KS ci ratio: 2.368491e-03	ci left: 4.826024e-01	ci right 4.837471e-01	k: 1415702	n:2930000
GLI2   2930000 perm   3854 sec   (760 perm/sec)   p_kst 4.831747e-01   p_cons 2.354949e-04   p_joint 2.887372e-04

Joint ci ratio: 1.343564e-01	ci left: 2.700062e-04	ci right 3.092204e-04	k: 850	n:2940000
Cons ci ratio: 1.489985e-01	ci left: 2.178359e-04	ci right 2.532287e-04	k: 691	n:2940000
KS ci ratio: 2.364435e-03	ci left: 4.826086e-01	ci right 4.837513e-01	k: 1420549	n:2940000
GLI2   2940000 perm   3877 sec   (758 perm/sec)   p_kst 4.831799e-01   p_cons 2.350340e-04   p_joint 2.891156e-04

Joint ci ratio: 1.342776e-01	ci left: 2.694185e-04	ci right 3.085226e-04	k: 851	n:2950000
Cons ci ratio: 1.486765e-01	ci left: 2.180766e-04	ci right 2.534251e-04	k: 694	n:2950000
KS ci ratio: 2.360570e-03	ci left: 4.825788e-01	ci right 4.837196e-01	k: 1425290	n:2950000
GLI2   2950000 perm   3902 sec   (756 perm/sec)   p_kst 4.831492e-01   p_cons 2.352542e-04   p_joint 2.884746e-04

Joint ci ratio: 1.339634e-01	ci left: 2.698143e-04	ci right 3.088769e-04	k: 855	n:2960000
Cons ci ratio: 1.484631e-01	ci left: 2.179904e-04	ci right 2.532697e-04	k: 696	n:2960000
KS ci ratio: 2.356710e-03	ci left: 4.825519e-01	ci right 4.836907e-01	k: 1430039	n:2960000
GLI2   2960000 perm   3926 sec   (754 perm/sec)   p_kst 4.831213e-01   p_cons 2.351351e-04   p_joint 2.888514e-04

Joint ci ratio: 1.333417e-01	ci left: 2.715094e-04	ci right 3.106205e-04	k: 863	n:2970000
Cons ci ratio: 1.479334e-01	ci left: 2.188775e-04	ci right 2.541628e-04	k: 701	n:2970000
KS ci ratio: 2.352726e-03	ci left: 4.825558e-01	ci right 4.836927e-01	k: 1434879	n:2970000
GLI2   2970000 perm   3949 sec   (752 perm/sec)   p_kst 4.831242e-01   p_cons 2.360269e-04   p_joint 2.905724e-04

Joint ci ratio: 1.331876e-01	ci left: 2.712470e-04	ci right 3.102717e-04	k: 865	n:2980000
Cons ci ratio: 1.476183e-01	ci left: 2.191125e-04	ci right 2.543538e-04	k: 704	n:2980000
KS ci ratio: 2.348854e-03	ci left: 4.825399e-01	ci right 4.836749e-01	k: 1439660	n:2980000
GLI2   2980000 perm   3973 sec   (750 perm/sec)   p_kst 4.831074e-01   p_cons 2.362416e-04   p_joint 2.902685e-04

Joint ci ratio: 1.328811e-01	ci left: 2.716331e-04	ci right 3.106163e-04	k: 869	n:2990000
Cons ci ratio: 1.470975e-01	ci left: 2.199903e-04	ci right 2.552370e-04	k: 709	n:2990000
KS ci ratio: 2.344829e-03	ci left: 4.825609e-01	ci right 4.836940e-01	k: 1444551	n:2990000
GLI2   2990000 perm   3997 sec   (748 perm/sec)   p_kst 4.831274e-01   p_cons 2.371237e-04   p_joint 2.906355e-04

Joint ci ratio: 1.328048e-01	ci left: 2.710499e-04	ci right 3.099253e-04	k: 870	n:3000000
Cons ci ratio: 1.467877e-01	ci left: 2.202202e-04	ci right 2.554229e-04	k: 712	n:3000000
KS ci ratio: 2.340910e-03	ci left: 4.825634e-01	ci right 4.836947e-01	k: 1449387	n:3000000
GLI2   3000000 perm   4021 sec   (746 perm/sec)   p_kst 4.831290e-01   p_cons 2.373333e-04   p_joint 2.900000e-04

Joint ci ratio: 1.324252e-01	ci left: 2.717555e-04	ci right 3.106118e-04	k: 875	n:3010000
Cons ci ratio: 1.465823e-01	ci left: 2.201287e-04	ci right 2.552632e-04	k: 714	n:3010000
KS ci ratio: 2.337128e-03	ci left: 4.825410e-01	ci right 4.836704e-01	k: 1454148	n:3010000
GLI2   3010000 perm   4046 sec   (744 perm/sec)   p_kst 4.831056e-01   p_cons 2.372093e-04   p_joint 2.906977e-04

Joint ci ratio: 1.320489e-01	ci left: 2.724565e-04	ci right 3.112937e-04	k: 880	n:3020000
Cons ci ratio: 1.459710e-01	ci left: 2.213138e-04	ci right 2.564773e-04	k: 720	n:3020000
KS ci ratio: 2.333326e-03	ci left: 4.825267e-01	ci right 4.836542e-01	k: 1458933	n:3020000
GLI2   3020000 perm   4070 sec   (742 perm/sec)   p_kst 4.830904e-01   p_cons 2.384106e-04   p_joint 2.913907e-04

Joint ci ratio: 1.319740e-01	ci left: 2.718764e-04	ci right 3.106072e-04	k: 881	n:3030000
Cons ci ratio: 1.456682e-01	ci left: 2.215374e-04	ci right 2.566571e-04	k: 723	n:3030000
KS ci ratio: 2.329433e-03	ci left: 4.825362e-01	ci right 4.836619e-01	k: 1463790	n:3030000
GLI2   3030000 perm   4094 sec   (740 perm/sec)   p_kst 4.830990e-01   p_cons 2.386139e-04   p_joint 2.907591e-04

Joint ci ratio: 1.315274e-01	ci left: 2.728907e-04	ci right 3.116242e-04	k: 887	n:3040000
Cons ci ratio: 1.450683e-01	ci left: 2.227106e-04	ci right 2.578582e-04	k: 729	n:3040000
KS ci ratio: 2.325586e-03	ci left: 4.825398e-01	ci right 4.836636e-01	k: 1468629	n:3040000
GLI2   3040000 perm   4119 sec   (738 perm/sec)   p_kst 4.831016e-01   p_cons 2.398026e-04   p_joint 2.917763e-04

Joint ci ratio: 1.312321e-01	ci left: 2.732644e-04	ci right 3.119570e-04	k: 891	n:3050000
Cons ci ratio: 1.450683e-01	ci left: 2.219803e-04	ci right 2.570128e-04	k: 729	n:3050000
KS ci ratio: 2.321773e-03	ci left: 4.825400e-01	ci right 4.836620e-01	k: 1473458	n:3050000
GLI2   3050000 perm   4144 sec   (736 perm/sec)   p_kst 4.831010e-01   p_cons 2.390164e-04   p_joint 2.921311e-04

Joint ci ratio: 1.311586e-01	ci left: 2.726874e-04	ci right 3.112751e-04	k: 892	n:3060000
Cons ci ratio: 1.450684e-01	ci left: 2.212549e-04	ci right 2.561729e-04	k: 729	n:3060000
KS ci ratio: 2.318055e-03	ci left: 4.825239e-01	ci right 4.836441e-01	k: 1478237	n:3060000
GLI2   3060000 perm   4169 sec   (734 perm/sec)   p_kst 4.830840e-01   p_cons 2.382353e-04   p_joint 2.915033e-04

Joint ci ratio: 1.308658e-01	ci left: 2.730594e-04	ci right 3.116068e-04	k: 896	n:3070000
Cons ci ratio: 1.448701e-01	ci left: 2.211620e-04	ci right 2.560135e-04	k: 731	n:3070000
KS ci ratio: 2.314142e-03	ci left: 4.825539e-01	ci right 4.836722e-01	k: 1483157	n:3070000
GLI2   3070000 perm   4194 sec   (732 perm/sec)   p_kst 4.831130e-01   p_cons 2.381107e-04   p_joint 2.918567e-04

Joint ci ratio: 1.305750e-01	ci left: 2.734291e-04	ci right 3.119362e-04	k: 900	n:3080000
Cons ci ratio: 1.445741e-01	ci left: 2.213828e-04	ci right 2.561916e-04	k: 734	n:3080000
KS ci ratio: 2.310245e-03	ci left: 4.825846e-01	ci right 4.837011e-01	k: 1488080	n:3080000
GLI2   3080000 perm   4219 sec   (730 perm/sec)   p_kst 4.831429e-01   p_cons 2.383117e-04   p_joint 2.922078e-04

Joint ci ratio: 1.303582e-01	ci left: 2.734834e-04	ci right 3.119292e-04	k: 903	n:3090000
Cons ci ratio: 1.444759e-01	ci left: 2.209782e-04	ci right 2.556978e-04	k: 735	n:3090000
KS ci ratio: 2.306517e-03	ci left: 4.825825e-01	ci right 4.836972e-01	k: 1492902	n:3090000
GLI2   3090000 perm   4245 sec   (728 perm/sec)   p_kst 4.831398e-01   p_cons 2.378641e-04   p_joint 2.922330e-04

Joint ci ratio: 1.303582e-01	ci left: 2.726012e-04	ci right 3.109230e-04	k: 903	n:3100000
Cons ci ratio: 1.443779e-01	ci left: 2.205763e-04	ci right 2.552072e-04	k: 736	n:3100000
KS ci ratio: 2.302673e-03	ci left: 4.826097e-01	ci right 4.837226e-01	k: 1497815	n:3100000
GLI2   3100000 perm   4270 sec   (726 perm/sec)   p_kst 4.831661e-01   p_cons 2.374194e-04   p_joint 2.912903e-04

Joint ci ratio: 1.301425e-01	ci left: 2.726579e-04	ci right 3.109193e-04	k: 906	n:3110000
Cons ci ratio: 1.442800e-01	ci left: 2.201770e-04	ci right 2.547197e-04	k: 737	n:3110000
KS ci ratio: 2.299090e-03	ci left: 4.825840e-01	ci right 4.836951e-01	k: 1502564	n:3110000
GLI2   3110000 perm   4295 sec   (724 perm/sec)   p_kst 4.831395e-01   p_cons 2.369775e-04   p_joint 2.913183e-04

Joint ci ratio: 1.300708e-01	ci left: 2.720940e-04	ci right 3.102537e-04	k: 907	n:3120000
Cons ci ratio: 1.442801e-01	ci left: 2.194713e-04	ci right 2.539033e-04	k: 737	n:3120000
KS ci ratio: 2.295194e-03	ci left: 4.826303e-01	ci right 4.837396e-01	k: 1507537	n:3120000
GLI2   3120000 perm   4320 sec   (722 perm/sec)   p_kst 4.831849e-01   p_cons 2.362179e-04   p_joint 2.907051e-04

Joint ci ratio: 1.335748e-01	ci left: 2.567037e-04	ci right 2.937519e-04	k: 860	n:3130000
Cons ci ratio: 1.441825e-01	ci left: 2.190781e-04	ci right 2.534232e-04	k: 738	n:3130000
KS ci ratio: 2.291645e-03	ci left: 4.826050e-01	ci right 4.837126e-01	k: 1512287	n:3130000
GLI2   3130000 perm   4345 sec   (720 perm/sec)   p_kst 4.831588e-01   p_cons 2.357827e-04   p_joint 2.747604e-04

Joint ci ratio: 1.333427e-01	ci left: 2.568097e-04	ci right 2.938036e-04	k: 863	n:3140000
Cons ci ratio: 1.439878e-01	ci left: 2.189943e-04	ci right 2.532760e-04	k: 740	n:3140000
KS ci ratio: 2.288086e-03	ci left: 4.825857e-01	ci right 4.836914e-01	k: 1517055	n:3140000
GLI2   3140000 perm   4370 sec   (719 perm/sec)   p_kst 4.831385e-01   p_cons 2.356688e-04   p_joint 2.748408e-04

Joint ci ratio: 1.295724e-01	ci left: 2.716527e-04	ci right 3.095933e-04	k: 914	n:3150000
Cons ci ratio: 1.436972e-01	ci left: 2.192172e-04	ci right 2.534585e-04	k: 743	n:3150000
KS ci ratio: 2.284412e-03	ci left: 4.825950e-01	ci right 4.836990e-01	k: 1521913	n:3150000
GLI2   3150000 perm   4395 sec   (717 perm/sec)   p_kst 4.831470e-01   p_cons 2.358730e-04   p_joint 2.901587e-04

Joint ci ratio: 1.327296e-01	ci left: 2.576317e-04	ci right 2.945600e-04	k: 871	n:3160000
Cons ci ratio: 1.433124e-01	ci left: 2.197439e-04	ci right 2.539677e-04	k: 747	n:3160000
KS ci ratio: 2.280820e-03	ci left: 4.825903e-01	ci right 4.836926e-01	k: 1526727	n:3160000
GLI2   3160000 perm   4420 sec   (715 perm/sec)   p_kst 4.831415e-01   p_cons 2.363924e-04   p_joint 2.756329e-04

Joint ci ratio: 1.325019e-01	ci left: 2.577340e-04	ci right 2.946085e-04	k: 874	n:3170000
Cons ci ratio: 1.430259e-01	ci left: 2.199632e-04	ci right 2.541468e-04	k: 750	n:3170000
KS ci ratio: 2.277095e-03	ci left: 4.826185e-01	ci right 4.837190e-01	k: 1531645	n:3170000
GLI2   3170000 perm   4447 sec   (713 perm/sec)   p_kst 4.831688e-01   p_cons 2.365931e-04   p_joint 2.757098e-04

Joint ci ratio: 1.323507e-01	ci left: 2.575316e-04	ci right 2.943318e-04	k: 876	n:3180000
Cons ci ratio: 1.428358e-01	ci left: 2.198779e-04	ci right 2.539990e-04	k: 752	n:3180000
KS ci ratio: 2.273491e-03	ci left: 4.826239e-01	ci right 4.837227e-01	k: 1536491	n:3180000
GLI2   3180000 perm   4472 sec   (711 perm/sec)   p_kst 4.831733e-01   p_cons 2.364780e-04   p_joint 2.754717e-04

Joint ci ratio: 1.322754e-01	ci left: 2.570274e-04	ci right 2.937330e-04	k: 877	n:3190000
Cons ci ratio: 1.426465e-01	ci left: 2.197932e-04	ci right 2.538521e-04	k: 754	n:3190000
KS ci ratio: 2.269968e-03	ci left: 4.826154e-01	ci right 4.837125e-01	k: 1541293	n:3190000
GLI2   3190000 perm   4498 sec   (709 perm/sec)   p_kst 4.831639e-01   p_cons 2.363636e-04   p_joint 2.749216e-04

Joint ci ratio: 1.320500e-01	ci left: 2.571307e-04	ci right 2.937836e-04	k: 880	n:3200000
Cons ci ratio: 1.420830e-01	ci left: 2.209146e-04	ci right 2.550005e-04	k: 760	n:3200000
KS ci ratio: 2.266446e-03	ci left: 4.826102e-01	ci right 4.837055e-01	k: 1546105	n:3200000
GLI2   3200000 perm   4524 sec   (707 perm/sec)   p_kst 4.831578e-01   p_cons 2.375000e-04   p_joint 2.750000e-04

Joint ci ratio: 1.317512e-01	ci left: 2.575346e-04	ci right 2.941555e-04	k: 884	n:3210000
Cons ci ratio: 1.417110e-01	ci left: 2.214282e-04	ci right 2.554964e-04	k: 764	n:3210000
KS ci ratio: 2.262988e-03	ci left: 4.825943e-01	ci right 4.836880e-01	k: 1550883	n:3210000
GLI2   3210000 perm   4550 sec   (705 perm/sec)   p_kst 4.831411e-01   p_cons 2.380062e-04   p_joint 2.753894e-04

Joint ci ratio: 1.316768e-01	ci left: 2.570352e-04	ci right 2.935628e-04	k: 885	n:3220000
Cons ci ratio: 1.416185e-01	ci left: 2.210401e-04	ci right 2.550245e-04	k: 765	n:3220000
KS ci ratio: 2.259491e-03	ci left: 4.825910e-01	ci right 4.836829e-01	k: 1555701	n:3220000
GLI2   3220000 perm   4576 sec   (704 perm/sec)   p_kst 4.831370e-01   p_cons 2.375776e-04   p_joint 2.748447e-04

Joint ci ratio: 1.310862e-01	ci left: 2.586348e-04	ci right 2.952121e-04	k: 893	n:3230000
Cons ci ratio: 1.412501e-01	ci left: 2.215503e-04	ci right 2.555172e-04	k: 769	n:3230000
KS ci ratio: 2.255980e-03	ci left: 4.825942e-01	ci right 4.836845e-01	k: 1560540	n:3230000
GLI2   3230000 perm   4602 sec   (702 perm/sec)   p_kst 4.831393e-01   p_cons 2.380805e-04   p_joint 2.764706e-04

Joint ci ratio: 1.624746e-01	ci left: 1.650355e-04	ci right 1.945119e-04	k: 581	n:3240000
Cons ci ratio: 1.407937e-01	ci left: 2.223553e-04	ci right 2.563262e-04	k: 774	n:3240000
KS ci ratio: 2.252563e-03	ci left: 4.825801e-01	ci right 4.836687e-01	k: 1565323	n:3240000
GLI2   3240000 perm   4628 sec   (700 perm/sec)   p_kst 4.831244e-01   p_cons 2.388889e-04   p_joint 1.793210e-04

Joint ci ratio: 1.621962e-01	ci left: 1.651181e-04	ci right 1.945538e-04	k: 583	n:3250000
Cons ci ratio: 1.407030e-01	ci left: 2.219680e-04	ci right 2.558560e-04	k: 775	n:3250000
KS ci ratio: 2.249109e-03	ci left: 4.825778e-01	ci right 4.836647e-01	k: 1570144	n:3250000
GLI2   3250000 perm   4654 sec   (698 perm/sec)   p_kst 4.831212e-01   p_cons 2.384615e-04   p_joint 1.793846e-04

Joint ci ratio: 1.619191e-01	ci left: 1.652002e-04	ci right 1.945953e-04	k: 585	n:3260000
Cons ci ratio: 1.404318e-01	ci left: 2.221750e-04	ci right 2.560237e-04	k: 778	n:3260000
KS ci ratio: 2.245740e-03	ci left: 4.825602e-01	ci right 4.836454e-01	k: 1574915	n:3260000
GLI2   3260000 perm   4680 sec   (697 perm/sec)   p_kst 4.831028e-01   p_cons 2.386503e-04   p_joint 1.794479e-04

Joint ci ratio: 1.619192e-01	ci left: 1.646950e-04	ci right 1.940003e-04	k: 585	n:3270000
Cons ci ratio: 1.403418e-01	ci left: 2.217906e-04	ci right 2.555573e-04	k: 779	n:3270000
KS ci ratio: 2.242359e-03	ci left: 4.825485e-01	ci right 4.836320e-01	k: 1579705	n:3270000
GLI2   3270000 perm   4706 sec   (695 perm/sec)   p_kst 4.830902e-01   p_cons 2.382263e-04   p_joint 1.788991e-04

Joint ci ratio: 1.615063e-01	ci left: 1.650705e-04	ci right 1.943604e-04	k: 588	n:3280000
Cons ci ratio: 1.400726e-01	ci left: 2.219970e-04	ci right 2.557249e-04	k: 782	n:3280000
KS ci ratio: 2.238833e-03	ci left: 4.825728e-01	ci right 4.836547e-01	k: 1584613	n:3280000
GLI2   3280000 perm   4732 sec   (693 perm/sec)   p_kst 4.831137e-01   p_cons 2.384146e-04   p_joint 1.792683e-04

Joint ci ratio: 1.613694e-01	ci left: 1.648605e-04	ci right 1.940859e-04	k: 589	n:3290000
Cons ci ratio: 1.400727e-01	ci left: 2.213222e-04	ci right 2.549476e-04	k: 782	n:3290000
KS ci ratio: 2.235280e-03	ci left: 4.826067e-01	ci right 4.836869e-01	k: 1589553	n:3290000
GLI2   3290000 perm   4758 sec   (692 perm/sec)   p_kst 4.831468e-01   p_cons 2.376900e-04   p_joint 1.790274e-04

Joint ci ratio: 1.293613e-01	ci left: 2.601844e-04	ci right 2.964595e-04	k: 917	n:3300000
Cons ci ratio: 1.399833e-01	ci left: 2.209440e-04	ci right 2.544887e-04	k: 783	n:3300000
KS ci ratio: 2.231905e-03	ci left: 4.826043e-01	ci right 4.836830e-01	k: 1594374	n:3300000
GLI2   3300000 perm   4784 sec   (690 perm/sec)   p_kst 4.831436e-01   p_cons 2.372727e-04   p_joint 2.778788e-04

Joint ci ratio: 1.292909e-01	ci left: 2.596907e-04	ci right 2.958757e-04	k: 918	n:3310000
Cons ci ratio: 1.398942e-01	ci left: 2.205680e-04	ci right 2.540325e-04	k: 784	n:3310000
KS ci ratio: 2.228445e-03	ci left: 4.826244e-01	ci right 4.837013e-01	k: 1599269	n:3310000
GLI2   3310000 perm   4810 sec   (688 perm/sec)   p_kst 4.831628e-01   p_cons 2.368580e-04   p_joint 2.773414e-04

Joint ci ratio: 1.290104e-01	ci left: 2.600744e-04	ci right 2.962283e-04	k: 922	n:3320000
Cons ci ratio: 1.397163e-01	ci left: 2.204850e-04	ci right 2.538908e-04	k: 786	n:3320000
KS ci ratio: 2.224894e-03	ci left: 4.826684e-01	ci right 4.837437e-01	k: 1604244	n:3320000
GLI2   3320000 perm   4836 sec   (686 perm/sec)   p_kst 4.832060e-01   p_cons 2.367470e-04   p_joint 2.777108e-04

Joint ci ratio: 1.288013e-01	ci left: 2.601652e-04	ci right 2.962686e-04	k: 925	n:3330000
Cons ci ratio: 1.395391e-01	ci left: 2.204025e-04	ci right 2.537500e-04	k: 788	n:3330000
KS ci ratio: 2.221563e-03	ci left: 4.826664e-01	ci right 4.837402e-01	k: 1609067	n:3330000
GLI2   3330000 perm   4862 sec   (685 perm/sec)   p_kst 4.832033e-01   p_cons 2.366366e-04   p_joint 2.777778e-04

Joint ci ratio: 1.287318e-01	ci left: 2.596761e-04	ci right 2.956906e-04	k: 926	n:3340000
Cons ci ratio: 1.393626e-01	ci left: 2.203205e-04	ci right 2.536099e-04	k: 790	n:3340000
KS ci ratio: 2.218282e-03	ci left: 4.826568e-01	ci right 4.837289e-01	k: 1613864	n:3340000
GLI2   3340000 perm   4890 sec   (683 perm/sec)   p_kst 4.831928e-01   p_cons 2.365269e-04   p_joint 2.772455e-04

Joint ci ratio: 1.285932e-01	ci left: 2.594787e-04	ci right 2.954242e-04	k: 928	n:3350000
Cons ci ratio: 1.393627e-01	ci left: 2.196628e-04	ci right 2.528529e-04	k: 790	n:3350000
KS ci ratio: 2.214979e-03	ci left: 4.826552e-01	ci right 4.837257e-01	k: 1618688	n:3350000
GLI2   3350000 perm   4917 sec   (681 perm/sec)   p_kst 4.831904e-01   p_cons 2.358209e-04   p_joint 2.770149e-04

Joint ci ratio: 1.283172e-01	ci left: 2.598587e-04	ci right 2.957737e-04	k: 932	n:3360000
Cons ci ratio: 1.390116e-01	ci left: 2.201581e-04	ci right 2.533323e-04	k: 794	n:3360000
KS ci ratio: 2.211735e-03	ci left: 4.826435e-01	ci right 4.837125e-01	k: 1623478	n:3360000
GLI2   3360000 perm   4944 sec   (680 perm/sec)   p_kst 4.831780e-01   p_cons 2.363095e-04   p_joint 2.773810e-04

Joint ci ratio: 1.281799e-01	ci left: 2.596620e-04	ci right 2.955085e-04	k: 934	n:3370000
Cons ci ratio: 1.387500e-01	ci left: 2.203641e-04	ci right 2.535016e-04	k: 797	n:3370000
KS ci ratio: 2.208416e-03	ci left: 4.826524e-01	ci right 4.837197e-01	k: 1628337	n:3370000
GLI2   3370000 perm   4971 sec   (678 perm/sec)   p_kst 4.831861e-01   p_cons 2.364985e-04   p_joint 2.771513e-04

Joint ci ratio: 1.281114e-01	ci left: 2.591801e-04	ci right 2.949396e-04	k: 935	n:3380000
Cons ci ratio: 1.386632e-01	ci left: 2.199977e-04	ci right 2.530578e-04	k: 798	n:3380000
KS ci ratio: 2.205158e-03	ci left: 4.826506e-01	ci right 4.837163e-01	k: 1633160	n:3380000
GLI2   3380000 perm   4998 sec   (676 perm/sec)   p_kst 4.831834e-01   p_cons 2.360947e-04   p_joint 2.766272e-04

Joint ci ratio: 1.280431e-01	ci left: 2.587011e-04	ci right 2.943740e-04	k: 936	n:3390000
Cons ci ratio: 1.385766e-01	ci left: 2.196335e-04	ci right 2.526165e-04	k: 799	n:3390000
KS ci ratio: 2.201934e-03	ci left: 4.826443e-01	ci right 4.837085e-01	k: 1637968	n:3390000
GLI2   3390000 perm   5025 sec   (675 perm/sec)   p_kst 4.831764e-01   p_cons 2.356932e-04   p_joint 2.761062e-04

Joint ci ratio: 1.278386e-01	ci left: 2.587944e-04	ci right 2.944187e-04	k: 939	n:3400000
Cons ci ratio: 1.384037e-01	ci left: 2.195554e-04	ci right 2.524821e-04	k: 801	n:3400000
KS ci ratio: 2.198755e-03	ci left: 4.826311e-01	ci right 4.836937e-01	k: 1642752	n:3400000
GLI2   3400000 perm   5052 sec   (673 perm/sec)   p_kst 4.831624e-01   p_cons 2.355882e-04   p_joint 2.761765e-04

Joint ci ratio: 1.276351e-01	ci left: 2.588871e-04	ci right 2.944632e-04	k: 942	n:3410000
Cons ci ratio: 1.383175e-01	ci left: 2.191946e-04	ci right 2.520451e-04	k: 802	n:3410000
KS ci ratio: 2.195361e-03	ci left: 4.826701e-01	ci right 4.837311e-01	k: 1647714	n:3410000
GLI2   3410000 perm   5080 sec   (671 perm/sec)   p_kst 4.832006e-01   p_cons 2.351906e-04   p_joint 2.762463e-04

Joint ci ratio: 1.273652e-01	ci left: 2.592624e-04	ci right 2.948091e-04	k: 946	n:3420000
Cons ci ratio: 1.379742e-01	ci left: 2.196829e-04	ci right 2.525181e-04	k: 806	n:3420000
KS ci ratio: 2.192185e-03	ci left: 4.826627e-01	ci right 4.837222e-01	k: 1652518	n:3420000
GLI2   3420000 perm   5107 sec   (670 perm/sec)   p_kst 4.831924e-01   p_cons 2.356725e-04   p_joint 2.766082e-04

Joint ci ratio: 1.270971e-01	ci left: 2.596356e-04	ci right 2.951528e-04	k: 950	n:3430000
Cons ci ratio: 1.375487e-01	ci left: 2.204499e-04	ci right 2.532898e-04	k: 811	n:3430000
KS ci ratio: 2.188855e-03	ci left: 4.826935e-01	ci right 4.837515e-01	k: 1657453	n:3430000
GLI2   3430000 perm   5135 sec   (668 perm/sec)   p_kst 4.832224e-01   p_cons 2.364431e-04   p_joint 2.769679e-04

Joint ci ratio: 1.267642e-01	ci left: 2.602882e-04	ci right 2.957944e-04	k: 955	n:3440000
Cons ci ratio: 1.372953e-01	ci left: 2.206511e-04	ci right 2.534556e-04	k: 814	n:3440000
KS ci ratio: 2.185663e-03	ci left: 4.826962e-01	ci right 4.837527e-01	k: 1662292	n:3440000
GLI2   3440000 perm   5162 sec   (666 perm/sec)   p_kst 4.832244e-01   p_cons 2.366279e-04   p_joint 2.776163e-04

Joint ci ratio: 1.265658e-01	ci left: 2.603757e-04	ci right 2.958342e-04	k: 958	n:3450000
Cons ci ratio: 1.370433e-01	ci left: 2.208513e-04	ci right 2.536203e-04	k: 817	n:3450000
KS ci ratio: 2.182460e-03	ci left: 4.827044e-01	ci right 4.837594e-01	k: 1667150	n:3450000
GLI2   3450000 perm   5191 sec   (665 perm/sec)   p_kst 4.832319e-01   p_cons 2.368116e-04   p_joint 2.776812e-04

Joint ci ratio: 1.263683e-01	ci left: 2.604628e-04	ci right 2.958736e-04	k: 961	n:3460000
Cons ci ratio: 1.369597e-01	ci left: 2.204921e-04	ci right 2.531862e-04	k: 818	n:3460000
KS ci ratio: 2.179282e-03	ci left: 4.827103e-01	ci right 4.837637e-01	k: 1672000	n:3460000
GLI2   3460000 perm   5219 sec   (663 perm/sec)   p_kst 4.832370e-01   p_cons 2.364162e-04   p_joint 2.777457e-04

Joint ci ratio: 1.261064e-01	ci left: 2.608286e-04	ci right 2.962101e-04	k: 965	n:3470000
Cons ci ratio: 1.366264e-01	ci left: 2.209700e-04	ci right 2.536487e-04	k: 822	n:3470000
KS ci ratio: 2.176146e-03	ci left: 4.827095e-01	ci right 4.837614e-01	k: 1676827	n:3470000
GLI2   3470000 perm   5247 sec   (661 perm/sec)   p_kst 4.832354e-01   p_cons 2.368876e-04   p_joint 2.780980e-04

Joint ci ratio: 1.258461e-01	ci left: 2.611923e-04	ci right 2.965445e-04	k: 969	n:3480000
Cons ci ratio: 1.364607e-01	ci left: 2.208901e-04	ci right 2.535142e-04	k: 824	n:3480000
KS ci ratio: 2.173053e-03	ci left: 4.827021e-01	ci right 4.837525e-01	k: 1681631	n:3480000
GLI2   3480000 perm   5275 sec   (660 perm/sec)   p_kst 4.832273e-01   p_cons 2.367816e-04   p_joint 2.784483e-04

Joint ci ratio: 1.257165e-01	ci left: 2.609989e-04	ci right 2.962859e-04	k: 971	n:3490000
Cons ci ratio: 1.362956e-01	ci left: 2.208107e-04	ci right 2.533804e-04	k: 826	n:3490000
KS ci ratio: 2.169984e-03	ci left: 4.826922e-01	ci right 4.837411e-01	k: 1686426	n:3490000
GLI2   3490000 perm   5303 sec   (658 perm/sec)   p_kst 4.832166e-01   p_cons 2.366762e-04   p_joint 2.782235e-04

Joint ci ratio: 1.255230e-01	ci left: 2.610834e-04	ci right 2.963235e-04	k: 974	n:3500000
Cons ci ratio: 1.360490e-01	ci left: 2.210077e-04	ci right 2.535428e-04	k: 829	n:3500000
KS ci ratio: 2.166835e-03	ci left: 4.827038e-01	ci right 4.837511e-01	k: 1691296	n:3500000
GLI2   3500000 perm   5333 sec   (656 perm/sec)   p_kst 4.832274e-01   p_cons 2.368571e-04   p_joint 2.782857e-04

Joint ci ratio: 1.251385e-01	ci left: 2.619954e-04	ci right 2.972422e-04	k: 980	n:3510000
Cons ci ratio: 1.357224e-01	ci left: 2.214789e-04	ci right 2.539987e-04	k: 833	n:3510000
KS ci ratio: 2.163741e-03	ci left: 4.827056e-01	ci right 4.837514e-01	k: 1696132	n:3510000
GLI2   3510000 perm   5361 sec   (655 perm/sec)   p_kst 4.832285e-01   p_cons 2.373219e-04   p_joint 2.792023e-04

Joint ci ratio: 1.249476e-01	ci left: 2.620767e-04	ci right 2.972767e-04	k: 983	n:3520000
Cons ci ratio: 1.354789e-01	ci left: 2.216731e-04	ci right 2.541583e-04	k: 836	n:3520000
KS ci ratio: 2.160565e-03	ci left: 4.827295e-01	ci right 4.837739e-01	k: 1701046	n:3520000
GLI2   3520000 perm   5389 sec   (653 perm/sec)   p_kst 4.832517e-01   p_cons 2.375000e-04   p_joint 2.792614e-04

Joint ci ratio: 1.247575e-01	ci left: 2.621576e-04	ci right 2.973109e-04	k: 986	n:3530000
Cons ci ratio: 1.349958e-01	ci left: 2.226874e-04	ci right 2.551955e-04	k: 842	n:3530000
KS ci ratio: 2.157472e-03	ci left: 4.827375e-01	ci right 4.837804e-01	k: 1705904	n:3530000
GLI2   3530000 perm   5417 sec   (652 perm/sec)   p_kst 4.832589e-01   p_cons 2.385269e-04   p_joint 2.793201e-04

Joint ci ratio: 1.245683e-01	ci left: 2.622381e-04	ci right 2.973449e-04	k: 989	n:3540000
Cons ci ratio: 1.349159e-01	ci left: 2.223312e-04	ci right 2.547666e-04	k: 843	n:3540000
KS ci ratio: 2.154328e-03	ci left: 4.827601e-01	ci right 4.838015e-01	k: 1710814	n:3540000
GLI2   3540000 perm   5445 sec   (650 perm/sec)   p_kst 4.832808e-01   p_cons 2.381356e-04   p_joint 2.793785e-04

Joint ci ratio: 1.164399e-01	ci left: 3.005686e-04	ci right 3.380009e-04	k: 1132	n:3550000
Cons ci ratio: 1.346767e-01	ci left: 2.225215e-04	ci right 2.549225e-04	k: 846	n:3550000
KS ci ratio: 2.151368e-03	ci left: 4.827431e-01	ci right 4.837831e-01	k: 1715584	n:3550000
GLI2   3550000 perm   5474 sec   (649 perm/sec)   p_kst 4.832631e-01   p_cons 2.383099e-04   p_joint 3.188732e-04

Joint ci ratio: 1.164399e-01	ci left: 2.997243e-04	ci right 3.370514e-04	k: 1132	n:3560000
Cons ci ratio: 1.345973e-01	ci left: 2.221679e-04	ci right 2.544968e-04	k: 847	n:3560000
KS ci ratio: 2.148388e-03	ci left: 4.827336e-01	ci right 4.837721e-01	k: 1720380	n:3560000
GLI2   3560000 perm   5502 sec   (647 perm/sec)   p_kst 4.832528e-01   p_cons 2.379213e-04   p_joint 3.179775e-04

Joint ci ratio: 1.163373e-01	ci left: 2.994286e-04	ci right 3.366838e-04	k: 1134	n:3570000
Cons ci ratio: 1.345180e-01	ci left: 2.218163e-04	ci right 2.540735e-04	k: 848	n:3570000
KS ci ratio: 2.145362e-03	ci left: 4.827378e-01	ci right 4.837748e-01	k: 1725225	n:3570000
GLI2   3570000 perm   5530 sec   (646 perm/sec)   p_kst 4.832563e-01   p_cons 2.375350e-04   p_joint 3.176471e-04

Joint ci ratio: 1.161839e-01	ci left: 2.994058e-04	ci right 3.366057e-04	k: 1137	n:3580000
Cons ci ratio: 1.343599e-01	ci left: 2.217365e-04	ci right 2.539412e-04	k: 850	n:3580000
KS ci ratio: 2.142388e-03	ci left: 4.827328e-01	ci right 4.837684e-01	k: 1730037	n:3580000
GLI2   3580000 perm   5559 sec   (644 perm/sec)   p_kst 4.832506e-01   p_cons 2.374302e-04   p_joint 3.175978e-04

Joint ci ratio: 1.159802e-01	ci left: 2.996537e-04	ci right 3.368146e-04	k: 1141	n:3590000
Cons ci ratio: 1.342023e-01	ci left: 2.216573e-04	ci right 2.538097e-04	k: 852	n:3590000
KS ci ratio: 2.139457e-03	ci left: 4.827208e-01	ci right 4.837550e-01	k: 1734824	n:3590000
GLI2   3590000 perm   5587 sec   (643 perm/sec)   p_kst 4.832379e-01   p_cons 2.373259e-04   p_joint 3.178273e-04

Joint ci ratio: 1.159295e-01	ci left: 2.990910e-04	ci right 3.361649e-04	k: 1142	n:3600000
Cons ci ratio: 1.340452e-01	ci left: 2.215785e-04	ci right 2.536788e-04	k: 854	n:3600000
KS ci ratio: 2.136519e-03	ci left: 4.827131e-01	ci right 4.837458e-01	k: 1739626	n:3600000
GLI2   3600000 perm   5616 sec   (641 perm/sec)   p_kst 4.832294e-01   p_cons 2.372222e-04   p_joint 3.172222e-04

Joint ci ratio: 1.158282e-01	ci left: 2.988005e-04	ci right 3.358037e-04	k: 1144	n:3610000
Cons ci ratio: 1.337327e-01	ci left: 2.220356e-04	ci right 2.541212e-04	k: 858	n:3610000
KS ci ratio: 2.133549e-03	ci left: 4.827160e-01	ci right 4.837472e-01	k: 1744466	n:3610000
GLI2   3610000 perm   5644 sec   (640 perm/sec)   p_kst 4.832316e-01   p_cons 2.376731e-04   p_joint 3.168975e-04

Joint ci ratio: 1.156264e-01	ci left: 2.990481e-04	ci right 3.360130e-04	k: 1148	n:3620000
Cons ci ratio: 1.333452e-01	ci left: 2.227573e-04	ci right 2.548466e-04	k: 863	n:3620000
KS ci ratio: 2.130582e-03	ci left: 4.827210e-01	ci right 4.837508e-01	k: 1749314	n:3620000
GLI2   3620000 perm   5672 sec   (638 perm/sec)   p_kst 4.832359e-01   p_cons 2.383978e-04   p_joint 3.171271e-04

Joint ci ratio: 1.153756e-01	ci left: 2.995619e-04	ci right 3.365046e-04	k: 1153	n:3630000
Cons ci ratio: 1.330375e-01	ci left: 2.232089e-04	ci right 2.552831e-04	k: 867	n:3630000
KS ci ratio: 2.127687e-03	ci left: 4.827117e-01	ci right 4.837401e-01	k: 1754110	n:3630000
GLI2   3630000 perm   5701 sec   (637 perm/sec)   p_kst 4.832259e-01   p_cons 2.388430e-04   p_joint 3.176309e-04

Joint ci ratio: 1.150768e-01	ci left: 3.003397e-04	ci right 3.372759e-04	k: 1159	n:3640000
Cons ci ratio: 1.325800e-01	ci left: 2.241893e-04	ci right 2.562849e-04	k: 873	n:3640000
KS ci ratio: 2.124769e-03	ci left: 4.827110e-01	ci right 4.837380e-01	k: 1758937	n:3640000
GLI2   3640000 perm   5730 sec   (635 perm/sec)   p_kst 4.832245e-01   p_cons 2.398352e-04   p_joint 3.184066e-04

Joint ci ratio: 1.192641e-01	ci left: 2.782411e-04	ci right 3.137924e-04	k: 1079	n:3650000
Cons ci ratio: 1.318279e-01	ci left: 2.262242e-04	ci right 2.584130e-04	k: 883	n:3650000
KS ci ratio: 2.121764e-03	ci left: 4.827335e-01	ci right 4.837591e-01	k: 1763849	n:3650000
GLI2   3650000 perm   5759 sec   (634 perm/sec)   p_kst 4.832463e-01   p_cons 2.419178e-04   p_joint 2.956164e-04

Joint ci ratio: 1.192642e-01	ci left: 2.774808e-04	ci right 3.129351e-04	k: 1079	n:3660000
Cons ci ratio: 1.317534e-01	ci left: 2.258703e-04	ci right 2.579892e-04	k: 884	n:3660000
KS ci ratio: 2.118978e-03	ci left: 4.827070e-01	ci right 4.837312e-01	k: 1768582	n:3660000
GLI2   3660000 perm   5788 sec   (632 perm/sec)   p_kst 4.832191e-01   p_cons 2.415301e-04   p_joint 2.948087e-04

Joint ci ratio: 1.190989e-01	ci left: 2.775178e-04	ci right 3.129242e-04	k: 1082	n:3670000
Cons ci ratio: 1.316048e-01	ci left: 2.257819e-04	ci right 2.578491e-04	k: 886	n:3670000
KS ci ratio: 2.116182e-03	ci left: 4.826859e-01	ci right 4.837087e-01	k: 1773334	n:3670000
GLI2   3670000 perm   5817 sec   (631 perm/sec)   p_kst 4.831973e-01   p_cons 2.414169e-04   p_joint 2.948229e-04

Joint ci ratio: 1.189891e-01	ci left: 2.772910e-04	ci right 3.126335e-04	k: 1084	n:3680000
Cons ci ratio: 1.316048e-01	ci left: 2.251683e-04	ci right 2.571484e-04	k: 886	n:3680000
KS ci ratio: 2.113438e-03	ci left: 4.826551e-01	ci right 4.836765e-01	k: 1778050	n:3680000
GLI2   3680000 perm   5846 sec   (630 perm/sec)   p_kst 4.831658e-01   p_cons 2.407609e-04   p_joint 2.945652e-04

Joint ci ratio: 1.188249e-01	ci left: 2.773283e-04	ci right 3.126235e-04	k: 1087	n:3690000
Cons ci ratio: 1.314567e-01	ci left: 2.250823e-04	ci right 2.570114e-04	k: 888	n:3690000
KS ci ratio: 2.110527e-03	ci left: 4.826664e-01	ci right 4.836864e-01	k: 1782921	n:3690000
GLI2   3690000 perm   5875 sec   (628 perm/sec)   p_kst 4.831764e-01   p_cons 2.406504e-04   p_joint 2.945799e-04

Joint ci ratio: 1.187159e-01	ci left: 2.771033e-04	ci right 3.123351e-04	k: 1089	n:3700000
Cons ci ratio: 1.313829e-01	ci left: 2.247353e-04	ci right 2.565959e-04	k: 889	n:3700000
KS ci ratio: 2.107685e-03	ci left: 4.826645e-01	ci right 4.836831e-01	k: 1787743	n:3700000
GLI2   3700000 perm   5904 sec   (627 perm/sec)   p_kst 4.831738e-01   p_cons 2.402703e-04   p_joint 2.943243e-04

Joint ci ratio: 1.184986e-01	ci left: 2.774026e-04	ci right 3.126034e-04	k: 1093	n:3710000
Cons ci ratio: 1.312355e-01	ci left: 2.246509e-04	ci right 2.564611e-04	k: 891	n:3710000
KS ci ratio: 2.104884e-03	ci left: 4.826553e-01	ci right 4.836725e-01	k: 1792538	n:3710000
GLI2   3710000 perm   5934 sec   (625 perm/sec)   p_kst 4.831639e-01   p_cons 2.401617e-04   p_joint 2.946092e-04

Joint ci ratio: 1.182826e-01	ci left: 2.777003e-04	ci right 3.128702e-04	k: 1097	n:3720000
Cons ci ratio: 1.309422e-01	ci left: 2.250871e-04	ci right 2.568822e-04	k: 895	n:3720000
KS ci ratio: 2.102164e-03	ci left: 4.826294e-01	ci right 4.836453e-01	k: 1797271	n:3720000
GLI2   3720000 perm   5964 sec   (624 perm/sec)   p_kst 4.831374e-01   p_cons 2.405914e-04   p_joint 2.948925e-04

Joint ci ratio: 1.181213e-01	ci left: 2.777363e-04	ci right 3.128594e-04	k: 1100	n:3730000
Cons ci ratio: 1.307235e-01	ci left: 2.252616e-04	ci right 2.570241e-04	k: 898	n:3730000
KS ci ratio: 2.099356e-03	ci left: 4.826273e-01	ci right 4.836419e-01	k: 1802092	n:3730000
GLI2   3730000 perm   5994 sec   (622 perm/sec)   p_kst 4.831346e-01   p_cons 2.407507e-04   p_joint 2.949062e-04

Joint ci ratio: 1.179607e-01	ci left: 2.777721e-04	ci right 3.128487e-04	k: 1103	n:3740000
Cons ci ratio: 1.303615e-01	ci left: 2.259525e-04	ci right 2.577174e-04	k: 903	n:3740000
KS ci ratio: 2.096554e-03	ci left: 4.826266e-01	ci right 4.836397e-01	k: 1806918	n:3740000
GLI2   3740000 perm   6025 sec   (621 perm/sec)   p_kst 4.831332e-01   p_cons 2.414439e-04   p_joint 2.949198e-04

Joint ci ratio: 1.178540e-01	ci left: 2.775490e-04	ci right 3.125635e-04	k: 1105	n:3750000
Cons ci ratio: 1.303615e-01	ci left: 2.253500e-04	ci right 2.570301e-04	k: 903	n:3750000
KS ci ratio: 2.093702e-03	ci left: 4.826402e-01	ci right 4.836521e-01	k: 1811798	n:3750000
GLI2   3750000 perm   6055 sec   (619 perm/sec)   p_kst 4.831461e-01   p_cons 2.408000e-04   p_joint 2.946667e-04

Joint ci ratio: 1.177476e-01	ci left: 2.773271e-04	ci right 3.122798e-04	k: 1107	n:3760000
Cons ci ratio: 1.302176e-01	ci left: 2.252652e-04	ci right 2.568958e-04	k: 905	n:3760000
KS ci ratio: 2.090974e-03	ci left: 4.826270e-01	ci right 4.836374e-01	k: 1816577	n:3760000
GLI2   3760000 perm   6085 sec   (618 perm/sec)   p_kst 4.831322e-01   p_cons 2.406915e-04   p_joint 2.944149e-04

Joint ci ratio: 1.175356e-01	ci left: 2.776213e-04	ci right 3.125437e-04	k: 1111	n:3770000
Cons ci ratio: 1.299310e-01	ci left: 2.256942e-04	ci right 2.573099e-04	k: 909	n:3770000
KS ci ratio: 2.088205e-03	ci left: 4.826262e-01	ci right 4.836353e-01	k: 1821403	n:3770000
GLI2   3770000 perm   6114 sec   (617 perm/sec)   p_kst 4.831308e-01   p_cons 2.411141e-04   p_joint 2.946950e-04

Joint ci ratio: 1.174301e-01	ci left: 2.774004e-04	ci right 3.122615e-04	k: 1113	n:3780000
Cons ci ratio: 1.296464e-01	ci left: 2.261209e-04	ci right 2.577217e-04	k: 913	n:3780000
KS ci ratio: 2.085360e-03	ci left: 4.826464e-01	ci right 4.836542e-01	k: 1826308	n:3780000
GLI2   3780000 perm   6144 sec   (615 perm/sec)   p_kst 4.831503e-01   p_cons 2.415344e-04   p_joint 2.944444e-04

Joint ci ratio: 1.173248e-01	ci left: 2.771807e-04	ci right 3.119808e-04	k: 1115	n:3790000
Cons ci ratio: 1.295048e-01	ci left: 2.260349e-04	ci right 2.575865e-04	k: 915	n:3790000
KS ci ratio: 2.082626e-03	ci left: 4.826424e-01	ci right 4.836489e-01	k: 1831122	n:3790000
GLI2   3790000 perm   6174 sec   (614 perm/sec)   p_kst 4.831456e-01   p_cons 2.414248e-04   p_joint 2.941953e-04

Joint ci ratio: 1.171151e-01	ci left: 2.774730e-04	ci right 3.122433e-04	k: 1119	n:3800000
Cons ci ratio: 1.292932e-01	ci left: 2.262040e-04	ci right 2.577236e-04	k: 918	n:3800000
KS ci ratio: 2.079877e-03	ci left: 4.826448e-01	ci right 4.836499e-01	k: 1835960	n:3800000
GLI2   3800000 perm   6204 sec   (612 perm/sec)   p_kst 4.831474e-01   p_cons 2.415789e-04   p_joint 2.944737e-04

Joint ci ratio: 1.168026e-01	ci left: 2.782735e-04	ci right 3.130446e-04	k: 1125	n:3810000
Cons ci ratio: 1.290827e-01	ci left: 2.263723e-04	ci right 2.578600e-04	k: 921	n:3810000
KS ci ratio: 2.077086e-03	ci left: 4.826598e-01	ci right 4.836636e-01	k: 1840846	n:3810000
GLI2   3810000 perm   6235 sec   (611 perm/sec)   p_kst 4.831617e-01   p_cons 2.417323e-04   p_joint 2.952756e-04

Joint ci ratio: 1.165441e-01	ci left: 2.788157e-04	ci right 3.135721e-04	k: 1130	n:3820000
Cons ci ratio: 1.289429e-01	ci left: 2.262863e-04	ci right 2.577255e-04	k: 923	n:3820000
KS ci ratio: 2.074387e-03	ci left: 4.826553e-01	ci right 4.836578e-01	k: 1845658	n:3820000
GLI2   3820000 perm   6265 sec   (610 perm/sec)   p_kst 4.831565e-01   p_cons 2.416230e-04   p_joint 2.958115e-04

Joint ci ratio: 1.163386e-01	ci left: 2.791017e-04	ci right 3.138282e-04	k: 1134	n:3830000
Cons ci ratio: 1.288036e-01	ci left: 2.262009e-04	ci right 2.575916e-04	k: 925	n:3830000
KS ci ratio: 2.071618e-03	ci left: 4.826702e-01	ci right 4.836714e-01	k: 1850544	n:3830000
GLI2   3830000 perm   6296 sec   (608 perm/sec)   p_kst 4.831708e-01   p_cons 2.415144e-04   p_joint 2.960836e-04

Joint ci ratio: 1.162874e-01	ci left: 2.786277e-04	ci right 3.132789e-04	k: 1135	n:3840000
Cons ci ratio: 1.286647e-01	ci left: 2.261159e-04	ci right 2.574583e-04	k: 927	n:3840000
KS ci ratio: 2.068980e-03	ci left: 4.826561e-01	ci right 4.836559e-01	k: 1855319	n:3840000
GLI2   3840000 perm   6327 sec   (607 perm/sec)   p_kst 4.831560e-01   p_cons 2.414063e-04   p_joint 2.955729e-04

Joint ci ratio: 1.161341e-01	ci left: 2.786606e-04	ci right 3.132671e-04	k: 1138	n:3850000
Cons ci ratio: 1.285263e-01	ci left: 2.260313e-04	ci right 2.573258e-04	k: 929	n:3850000
KS ci ratio: 2.066273e-03	ci left: 4.826612e-01	ci right 4.836598e-01	k: 1860168	n:3850000
GLI2   3850000 perm   6358 sec   (606 perm/sec)   p_kst 4.831605e-01   p_cons 2.412987e-04   p_joint 2.955844e-04

Joint ci ratio: 1.159307e-01	ci left: 2.789449e-04	ci right 3.135218e-04	k: 1142	n:3860000
Cons ci ratio: 1.283195e-01	ci left: 2.261980e-04	ci right 2.574613e-04	k: 932	n:3860000
KS ci ratio: 2.063603e-03	ci left: 4.826599e-01	ci right 4.836572e-01	k: 1864992	n:3860000
GLI2   3860000 perm   6389 sec   (604 perm/sec)   p_kst 4.831585e-01   p_cons 2.414508e-04   p_joint 2.958549e-04

Joint ci ratio: 1.157789e-01	ci left: 2.789768e-04	ci right 3.135094e-04	k: 1145	n:3870000
Cons ci ratio: 1.281822e-01	ci left: 2.261137e-04	ci right 2.573294e-04	k: 934	n:3870000
KS ci ratio: 2.060958e-03	ci left: 4.826550e-01	ci right 4.836510e-01	k: 1869802	n:3870000
GLI2   3870000 perm   6420 sec   (603 perm/sec)   p_kst 4.831530e-01   p_cons 2.413437e-04   p_joint 2.958656e-04

Joint ci ratio: 1.154268e-01	ci left: 2.800097e-04	ci right 3.145576e-04	k: 1152	n:3880000
Cons ci ratio: 1.280453e-01	ci left: 2.260299e-04	ci right 2.571982e-04	k: 936	n:3880000
KS ci ratio: 2.058329e-03	ci left: 4.826485e-01	ci right 4.836432e-01	k: 1874606	n:3880000
GLI2   3880000 perm   6451 sec   (601 perm/sec)   p_kst 4.831459e-01   p_cons 2.412371e-04   p_joint 2.969072e-04

Joint ci ratio: 1.152770e-01	ci left: 2.800389e-04	ci right 3.145424e-04	k: 1155	n:3890000
Cons ci ratio: 1.278408e-01	ci left: 2.261953e-04	ci right 2.573329e-04	k: 939	n:3890000
KS ci ratio: 2.055698e-03	ci left: 4.826452e-01	ci right 4.836386e-01	k: 1879422	n:3890000
GLI2   3890000 perm   6482 sec   (600 perm/sec)   p_kst 4.831419e-01   p_cons 2.413882e-04   p_joint 2.969152e-04

Joint ci ratio: 1.150780e-01	ci left: 2.803169e-04	ci right 3.147911e-04	k: 1159	n:3900000
Cons ci ratio: 1.276373e-01	ci left: 2.263600e-04	ci right 2.574668e-04	k: 942	n:3900000
KS ci ratio: 2.053158e-03	ci left: 4.826224e-01	ci right 4.836146e-01	k: 1884162	n:3900000
GLI2   3900000 perm   6513 sec   (599 perm/sec)   p_kst 4.831185e-01   p_cons 2.415385e-04   p_joint 2.971795e-04

Joint ci ratio: 1.149790e-01	ci left: 2.800968e-04	ci right 3.145122e-04	k: 1161	n:3910000
Cons ci ratio: 1.275697e-01	ci left: 2.260287e-04	ci right 2.570723e-04	k: 943	n:3910000
KS ci ratio: 2.050553e-03	ci left: 4.826176e-01	ci right 4.836085e-01	k: 1888972	n:3910000
GLI2   3910000 perm   6544 sec   (597 perm/sec)   p_kst 4.831130e-01   p_cons 2.411765e-04   p_joint 2.969309e-04

Joint ci ratio: 1.147816e-01	ci left: 2.803734e-04	ci right 3.147596e-04	k: 1165	n:3920000
Cons ci ratio: 1.273003e-01	ci left: 2.264399e-04	ci right 2.574694e-04	k: 947	n:3920000
KS ci ratio: 2.047923e-03	ci left: 4.826213e-01	ci right 4.836109e-01	k: 1893815	n:3920000
GLI2   3920000 perm   6576 sec   (596 perm/sec)   p_kst 4.831161e-01   p_cons 2.415816e-04   p_joint 2.971939e-04

Joint ci ratio: 1.146342e-01	ci left: 2.804014e-04	ci right 3.147439e-04	k: 1168	n:3930000
Cons ci ratio: 1.271662e-01	ci left: 2.263565e-04	ci right 2.573393e-04	k: 949	n:3930000
KS ci ratio: 2.045388e-03	ci left: 4.826043e-01	ci right 4.835927e-01	k: 1898577	n:3930000
GLI2   3930000 perm   6607 sec   (595 perm/sec)   p_kst 4.830985e-01   p_cons 2.414758e-04   p_joint 2.972010e-04

Joint ci ratio: 1.143898e-01	ci left: 2.809224e-04	ci right 3.152504e-04	k: 1173	n:3940000
Cons ci ratio: 1.270326e-01	ci left: 2.262734e-04	ci right 2.572099e-04	k: 951	n:3940000
KS ci ratio: 2.042771e-03	ci left: 4.826098e-01	ci right 4.835969e-01	k: 1903427	n:3940000
GLI2   3940000 perm   6639 sec   (593 perm/sec)   p_kst 4.831033e-01   p_cons 2.413706e-04   p_joint 2.977157e-04

Joint ci ratio: 1.142925e-01	ci left: 2.807031e-04	ci right 3.149732e-04	k: 1175	n:3950000
Cons ci ratio: 1.268993e-01	ci left: 2.261908e-04	ci right 2.570812e-04	k: 953	n:3950000
KS ci ratio: 2.040132e-03	ci left: 4.826230e-01	ci right 4.836089e-01	k: 1908308	n:3950000
GLI2   3950000 perm   6670 sec   (592 perm/sec)   p_kst 4.831159e-01   p_cons 2.412658e-04   p_joint 2.974684e-04

Joint ci ratio: 1.141954e-01	ci left: 2.804848e-04	ci right 3.146972e-04	k: 1177	n:3960000
Cons ci ratio: 1.266341e-01	ci left: 2.265977e-04	ci right 2.574741e-04	k: 957	n:3960000
KS ci ratio: 2.037593e-03	ci left: 4.826143e-01	ci right 4.835989e-01	k: 1913102	n:3960000
GLI2   3960000 perm   6702 sec   (591 perm/sec)   p_kst 4.831066e-01   p_cons 2.416667e-04   p_joint 2.972222e-04

Joint ci ratio: 1.140986e-01	ci left: 2.802677e-04	ci right 3.144227e-04	k: 1179	n:3970000
Cons ci ratio: 1.265021e-01	ci left: 2.265148e-04	ci right 2.573453e-04	k: 959	n:3970000
KS ci ratio: 2.035004e-03	ci left: 4.826199e-01	ci right 4.836033e-01	k: 1917953	n:3970000
GLI2   3970000 perm   6733 sec   (590 perm/sec)   p_kst 4.831116e-01   p_cons 2.415617e-04   p_joint 2.969773e-04

Joint ci ratio: 1.139539e-01	ci left: 2.802958e-04	ci right 3.144080e-04	k: 1182	n:3980000
Cons ci ratio: 1.264363e-01	ci left: 2.261889e-04	ci right 2.569579e-04	k: 960	n:3980000
KS ci ratio: 2.032465e-03	ci left: 4.826160e-01	ci right 4.835981e-01	k: 1922766	n:3980000
GLI2   3980000 perm   6765 sec   (588 perm/sec)   p_kst 4.831070e-01   p_cons 2.412060e-04   p_joint 2.969849e-04

Joint ci ratio: 1.138577e-01	ci left: 2.800803e-04	ci right 3.141355e-04	k: 1184	n:3990000
Cons ci ratio: 1.264364e-01	ci left: 2.256221e-04	ci right 2.563139e-04	k: 960	n:3990000
KS ci ratio: 2.029939e-03	ci left: 4.826111e-01	ci right 4.835920e-01	k: 1927575	n:3990000
GLI2   3990000 perm   6796 sec   (587 perm/sec)   p_kst 4.831015e-01   p_cons 2.406015e-04   p_joint 2.967419e-04

Joint ci ratio: 1.138577e-01	ci left: 2.793801e-04	ci right 3.133502e-04	k: 1184	n:4000000
Cons ci ratio: 1.264364e-01	ci left: 2.250580e-04	ci right 2.556731e-04	k: 960	n:4000000
KS ci ratio: 2.027389e-03	ci left: 4.826142e-01	ci right 4.835938e-01	k: 1932416	n:4000000
GLI2   4000000 perm   6829 sec   (586 perm/sec)   p_kst 4.831040e-01   p_cons 2.400000e-04   p_joint 2.960000e-04

Joint ci ratio: 1.138578e-01	ci left: 2.786833e-04	ci right 3.125688e-04	k: 1184	n:4010000
Cons ci ratio: 1.264364e-01	ci left: 2.244967e-04	ci right 2.550355e-04	k: 960	n:4010000
KS ci ratio: 2.024916e-03	ci left: 4.826011e-01	ci right 4.835795e-01	k: 1937192	n:4010000
GLI2   4010000 perm   6861 sec   (584 perm/sec)   p_kst 4.830903e-01   p_cons 2.394015e-04   p_joint 2.952618e-04

Joint ci ratio: 1.395420e-01	ci left: 1.825719e-04	ci right 2.101962e-04	k: 788	n:4020000
Cons ci ratio: 1.263051e-01	ci left: 2.244201e-04	ci right 2.549143e-04	k: 962	n:4020000
KS ci ratio: 2.022433e-03	ci left: 4.825925e-01	ci right 4.835697e-01	k: 1941986	n:4020000
GLI2   4020000 perm   6893 sec   (583 perm/sec)   p_kst 4.830811e-01   p_cons 2.393035e-04   p_joint 1.960199e-04

Joint ci ratio: 1.394537e-01	ci left: 1.823584e-04	ci right 2.099314e-04	k: 789	n:4030000
Cons ci ratio: 1.262396e-01	ci left: 2.241035e-04	ci right 2.545378e-04	k: 963	n:4030000
KS ci ratio: 2.020081e-03	ci left: 4.825537e-01	ci right 4.835297e-01	k: 1946658	n:4030000
GLI2   4030000 perm   6925 sec   (582 perm/sec)   p_kst 4.830417e-01   p_cons 2.389578e-04   p_joint 1.957816e-04

Joint ci ratio: 1.453717e-01	ci left: 1.668682e-04	ci right 1.932628e-04	k: 726	n:4040000
Cons ci ratio: 1.261088e-01	ci left: 2.240282e-04	ci right 2.544184e-04	k: 965	n:4040000
KS ci ratio: 2.017662e-03	ci left: 4.825339e-01	ci right 4.835087e-01	k: 1951406	n:4040000
GLI2   4040000 perm   6957 sec   (581 perm/sec)   p_kst 4.830213e-01   p_cons 2.388614e-04   p_joint 1.797030e-04

Joint ci ratio: 1.451721e-01	ci left: 1.669321e-04	ci right 1.932974e-04	k: 728	n:4050000
Cons ci ratio: 1.259135e-01	ci left: 2.241925e-04	ci right 2.545543e-04	k: 968	n:4050000
KS ci ratio: 2.015226e-03	ci left: 4.825206e-01	ci right 4.834942e-01	k: 1956180	n:4050000
GLI2   4050000 perm   6989 sec   (579 perm/sec)   p_kst 4.830074e-01   p_cons 2.390123e-04   p_joint 1.797531e-04

Joint ci ratio: 1.130497e-01	ci left: 2.793197e-04	ci right 3.130253e-04	k: 1201	n:4060000
Cons ci ratio: 1.258486e-01	ci left: 2.238788e-04	ci right 2.541814e-04	k: 969	n:4060000
KS ci ratio: 2.012703e-03	ci left: 4.825311e-01	ci right 4.835035e-01	k: 1961050	n:4060000
GLI2   4060000 perm   7022 sec   (578 perm/sec)   p_kst 4.830172e-01   p_cons 2.386700e-04   p_joint 2.958128e-04

Joint ci ratio: 1.130027e-01	ci left: 2.788721e-04	ci right 3.125089e-04	k: 1202	n:4070000
Cons ci ratio: 1.257838e-01	ci left: 2.235667e-04	ci right 2.538103e-04	k: 970	n:4070000
KS ci ratio: 2.010270e-03	ci left: 4.825213e-01	ci right 4.834925e-01	k: 1965838	n:4070000
GLI2   4070000 perm   7054 sec   (577 perm/sec)   p_kst 4.830069e-01   p_cons 2.383292e-04   p_joint 2.953317e-04

Joint ci ratio: 1.129089e-01	ci left: 2.786650e-04	ci right 3.122470e-04	k: 1204	n:4080000
Cons ci ratio: 1.257838e-01	ci left: 2.230187e-04	ci right 2.531882e-04	k: 970	n:4080000
KS ci ratio: 2.007794e-03	ci left: 4.825246e-01	ci right 4.834946e-01	k: 1970679	n:4080000
GLI2   4080000 perm   7087 sec   (576 perm/sec)   p_kst 4.830096e-01   p_cons 2.377451e-04   p_joint 2.950980e-04

Joint ci ratio: 1.128622e-01	ci left: 2.782212e-04	ci right 3.117349e-04	k: 1205	n:4090000
Cons ci ratio: 1.255899e-01	ci left: 2.231839e-04	ci right 2.533257e-04	k: 973	n:4090000
KS ci ratio: 2.005355e-03	ci left: 4.825210e-01	ci right 4.834898e-01	k: 1975492	n:4090000
GLI2   4090000 perm   7119 sec   (575 perm/sec)   p_kst 4.830054e-01   p_cons 2.378973e-04   p_joint 2.946210e-04

Joint ci ratio: 1.125824e-01	ci left: 2.789648e-04	ci right 3.124793e-04	k: 1211	n:4100000
Cons ci ratio: 1.253328e-01	ci left: 2.235845e-04	ci right 2.537140e-04	k: 977	n:4100000
KS ci ratio: 2.002912e-03	ci left: 4.825206e-01	ci right 4.834882e-01	k: 1980318	n:4100000
GLI2   4100000 perm   7152 sec   (573 perm/sec)   p_kst 4.830044e-01   p_cons 2.382927e-04   p_joint 2.953659e-04

Joint ci ratio: 1.124433e-01	ci left: 2.789954e-04	ci right 3.124694e-04	k: 1214	n:4110000
Cons ci ratio: 1.250773e-01	ci left: 2.239833e-04	ci right 2.541004e-04	k: 981	n:4110000
KS ci ratio: 2.000443e-03	ci left: 4.825289e-01	ci right 4.834954e-01	k: 1985180	n:4110000
GLI2   4110000 perm   7184 sec   (572 perm/sec)   p_kst 4.830122e-01   p_cons 2.386861e-04   p_joint 2.953771e-04

Joint ci ratio: 1.123971e-01	ci left: 2.785542e-04	ci right 3.119606e-04	k: 1215	n:4120000
Cons ci ratio: 1.250137e-01	ci left: 2.236748e-04	ci right 2.537340e-04	k: 982	n:4120000
KS ci ratio: 1.998158e-03	ci left: 4.824933e-01	ci right 4.834586e-01	k: 1989861	n:4120000
GLI2   4120000 perm   7216 sec   (571 perm/sec)   p_kst 4.829760e-01   p_cons 2.383495e-04   p_joint 2.949029e-04

Joint ci ratio: 1.123971e-01	ci left: 2.778797e-04	ci right 3.112052e-04	k: 1215	n:4130000
Cons ci ratio: 1.250137e-01	ci left: 2.231332e-04	ci right 2.531196e-04	k: 982	n:4130000
KS ci ratio: 1.995768e-03	ci left: 4.824865e-01	ci right 4.834506e-01	k: 1994660	n:4130000
GLI2   4130000 perm   7249 sec   (570 perm/sec)   p_kst 4.829685e-01   p_cons 2.377724e-04   p_joint 2.941889e-04

Joint ci ratio: 1.122588e-01	ci left: 2.779128e-04	ci right 3.111985e-04	k: 1218	n:4140000
Cons ci ratio: 1.248234e-01	ci left: 2.232962e-04	ci right 2.532555e-04	k: 985	n:4140000
KS ci ratio: 1.993415e-03	ci left: 4.824722e-01	ci right 4.834351e-01	k: 1999428	n:4140000
GLI2   4140000 perm   7281 sec   (569 perm/sec)   p_kst 4.829536e-01   p_cons 2.379227e-04   p_joint 2.942029e-04

Joint ci ratio: 1.121668e-01	ci left: 2.777115e-04	ci right 3.109441e-04	k: 1220	n:4150000
Cons ci ratio: 1.246970e-01	ci left: 2.232250e-04	ci right 2.531422e-04	k: 987	n:4150000
KS ci ratio: 1.990947e-03	ci left: 4.824890e-01	ci right 4.834508e-01	k: 2004325	n:4150000
GLI2   4150000 perm   7313 sec   (567 perm/sec)   p_kst 4.829699e-01   p_cons 2.378313e-04   p_joint 2.939759e-04

Joint ci ratio: 1.375516e-01	ci left: 1.817649e-04	ci right 2.088426e-04	k: 811	n:4160000
Cons ci ratio: 1.245709e-01	ci left: 2.231542e-04	ci right 2.530294e-04	k: 989	n:4160000
KS ci ratio: 1.988554e-03	ci left: 4.824894e-01	ci right 4.834500e-01	k: 2009154	n:4160000
GLI2   4160000 perm   7347 sec   (566 perm/sec)   p_kst 4.829697e-01   p_cons 2.377404e-04   p_joint 1.949519e-04

Joint ci ratio: 1.372982e-01	ci left: 1.820237e-04	ci right 2.090860e-04	k: 814	n:4170000
Cons ci ratio: 1.243826e-01	ci left: 2.233161e-04	ci right 2.531645e-04	k: 992	n:4170000
KS ci ratio: 1.986194e-03	ci left: 4.824833e-01	ci right 4.834428e-01	k: 2013956	n:4170000
GLI2   4170000 perm   7380 sec   (565 perm/sec)   p_kst 4.829631e-01   p_cons 2.378897e-04   p_joint 1.952038e-04

Joint ci ratio: 1.371300e-01	ci left: 1.820503e-04	ci right 2.090806e-04	k: 816	n:4180000
Cons ci ratio: 1.240706e-01	ci left: 2.239409e-04	ci right 2.537921e-04	k: 997	n:4180000
KS ci ratio: 1.983959e-03	ci left: 4.824481e-01	ci right 4.834064e-01	k: 2018636	n:4180000
GLI2   4180000 perm   7413 sec   (564 perm/sec)   p_kst 4.829273e-01   p_cons 2.385167e-04   p_joint 1.952153e-04

Joint ci ratio: 1.369625e-01	ci left: 1.820768e-04	ci right 2.090753e-04	k: 818	n:4190000
Cons ci ratio: 1.240085e-01	ci left: 2.236376e-04	ci right 2.534325e-04	k: 998	n:4190000
KS ci ratio: 1.981669e-03	ci left: 4.824288e-01	ci right 4.833860e-01	k: 2023382	n:4190000
GLI2   4190000 perm   7446 sec   (563 perm/sec)   p_kst 4.829074e-01   p_cons 2.381862e-04   p_joint 1.952267e-04

Joint ci ratio: 1.369625e-01	ci left: 1.816433e-04	ci right 2.085775e-04	k: 818	n:4200000
Cons ci ratio: 1.239465e-01	ci left: 2.233359e-04	ci right 2.530745e-04	k: 999	n:4200000
KS ci ratio: 1.979274e-03	ci left: 4.824382e-01	ci right 4.833942e-01	k: 2028248	n:4200000
GLI2   4200000 perm   7479 sec   (562 perm/sec)   p_kst 4.829162e-01   p_cons 2.378571e-04   p_joint 1.947619e-04

Joint ci ratio: 1.368790e-01	ci left: 1.814412e-04	ci right 2.083278e-04	k: 819	n:4210000
Cons ci ratio: 1.236993e-01	ci left: 2.237261e-04	ci right 2.534529e-04	k: 1003	n:4210000
KS ci ratio: 1.976897e-03	ci left: 4.824449e-01	ci right 4.833998e-01	k: 2033103	n:4210000
GLI2   4210000 perm   7513 sec   (560 perm/sec)   p_kst 4.829223e-01   p_cons 2.382423e-04   p_joint 1.945368e-04

Joint ci ratio: 1.368790e-01	ci left: 1.810112e-04	ci right 2.078341e-04	k: 819	n:4220000
Cons ci ratio: 1.235763e-01	ci left: 2.236552e-04	ci right 2.533409e-04	k: 1005	n:4220000
KS ci ratio: 1.974576e-03	ci left: 4.824397e-01	ci right 4.833935e-01	k: 2037908	n:4220000
GLI2   4220000 perm   7547 sec   (559 perm/sec)   p_kst 4.829166e-01   p_cons 2.381517e-04   p_joint 1.940758e-04

Joint ci ratio: 1.365464e-01	ci left: 1.814966e-04	ci right 2.083207e-04	k: 823	n:4230000
Cons ci ratio: 1.232703e-01	ci left: 2.242720e-04	ci right 2.539605e-04	k: 1010	n:4230000
KS ci ratio: 1.972220e-03	ci left: 4.824457e-01	ci right 4.833983e-01	k: 2042760	n:4230000
GLI2   4230000 perm   7580 sec   (558 perm/sec)   p_kst 4.829220e-01   p_cons 2.387707e-04   p_joint 1.945626e-04

Joint ci ratio: 1.361339e-01	ci left: 1.822076e-04	ci right 2.090488e-04	k: 828	n:4240000
Cons ci ratio: 1.230878e-01	ci left: 2.244288e-04	ci right 2.540909e-04	k: 1013	n:4240000
KS ci ratio: 1.969844e-03	ci left: 4.824584e-01	ci right 4.834100e-01	k: 2047641	n:4240000
GLI2   4240000 perm   7615 sec   (557 perm/sec)   p_kst 4.829342e-01   p_cons 2.389151e-04   p_joint 1.952830e-04

Joint ci ratio: 1.360519e-01	ci left: 1.820061e-04	ci right 2.088002e-04	k: 829	n:4250000
Cons ci ratio: 1.230272e-01	ci left: 2.241288e-04	ci right 2.537356e-04	k: 1014	n:4250000
KS ci ratio: 1.967572e-03	ci left: 4.824472e-01	ci right 4.833976e-01	k: 2052420	n:4250000
GLI2   4250000 perm   7648 sec   (556 perm/sec)   p_kst 4.829224e-01   p_cons 2.385882e-04   p_joint 1.950588e-04

Joint ci ratio: 1.356439e-01	ci left: 1.827127e-04	ci right 2.095237e-04	k: 834	n:4260000
Cons ci ratio: 1.229667e-01	ci left: 2.238302e-04	ci right 2.533819e-04	k: 1015	n:4260000
KS ci ratio: 1.965300e-03	ci left: 4.824378e-01	ci right 4.833871e-01	k: 2057207	n:4260000
GLI2   4260000 perm   7681 sec   (555 perm/sec)   p_kst 4.829124e-01   p_cons 2.382629e-04   p_joint 1.957746e-04

Joint ci ratio: 1.356439e-01	ci left: 1.822848e-04	ci right 2.090330e-04	k: 834	n:4270000
Cons ci ratio: 1.228458e-01	ci left: 2.237600e-04	ci right 2.532713e-04	k: 1017	n:4270000
KS ci ratio: 1.963075e-03	ci left: 4.824187e-01	ci right 4.833668e-01	k: 2061952	n:4270000
GLI2   4270000 perm   7715 sec   (553 perm/sec)   p_kst 4.828927e-01   p_cons 2.381733e-04   p_joint 1.953162e-04

Joint ci ratio: 1.354009e-01	ci left: 1.825361e-04	ci right 2.092693e-04	k: 837	n:4280000
Cons ci ratio: 1.226051e-01	ci left: 2.241431e-04	ci right 2.536428e-04	k: 1021	n:4280000
KS ci ratio: 1.960803e-03	ci left: 4.824134e-01	ci right 4.833605e-01	k: 2066756	n:4280000
GLI2   4280000 perm   7749 sec   (552 perm/sec)   p_kst 4.828869e-01   p_cons 2.385514e-04   p_joint 1.955607e-04

Joint ci ratio: 1.351591e-01	ci left: 1.827862e-04	ci right 2.095044e-04	k: 840	n:4290000
Cons ci ratio: 1.223659e-01	ci left: 2.245244e-04	ci right 2.540125e-04	k: 1025	n:4290000
KS ci ratio: 1.958574e-03	ci left: 4.823993e-01	ci right 4.833453e-01	k: 2071522	n:4290000
GLI2   4290000 perm   7782 sec   (551 perm/sec)   p_kst 4.828723e-01   p_cons 2.389277e-04   p_joint 1.958042e-04

Joint ci ratio: 1.350789e-01	ci left: 1.825858e-04	ci right 2.092576e-04	k: 841	n:4300000
Cons ci ratio: 1.222468e-01	ci left: 2.244532e-04	ci right 2.539011e-04	k: 1027	n:4300000
KS ci ratio: 1.956396e-03	ci left: 4.823741e-01	ci right 4.833190e-01	k: 2076240	n:4300000
GLI2   4300000 perm   7816 sec   (550 perm/sec)   p_kst 4.828465e-01   p_cons 2.388372e-04   p_joint 1.955814e-04

Joint ci ratio: 1.349988e-01	ci left: 1.823864e-04	ci right 2.090119e-04	k: 842	n:4310000
Cons ci ratio: 1.222468e-01	ci left: 2.239324e-04	ci right 2.533120e-04	k: 1027	n:4310000
KS ci ratio: 1.954088e-03	ci left: 4.823843e-01	ci right 4.833280e-01	k: 2081110	n:4310000
GLI2   4310000 perm   7850 sec   (549 perm/sec)   p_kst 4.828561e-01   p_cons 2.382831e-04   p_joint 1.953596e-04

Joint ci ratio: 1.349188e-01	ci left: 1.821878e-04	ci right 2.087674e-04	k: 843	n:4320000
Cons ci ratio: 1.220689e-01	ci left: 2.240873e-04	ci right 2.534413e-04	k: 1030	n:4320000
KS ci ratio: 1.951890e-03	ci left: 4.823680e-01	ci right 4.833107e-01	k: 2085866	n:4320000
GLI2   4320000 perm   7884 sec   (548 perm/sec)   p_kst 4.828394e-01   p_cons 2.384259e-04   p_joint 1.951389e-04

Joint ci ratio: 1.346796e-01	ci left: 1.824366e-04	ci right 2.090015e-04	k: 846	n:4330000
Cons ci ratio: 1.219506e-01	ci left: 2.240175e-04	ci right 2.533320e-04	k: 1032	n:4330000
KS ci ratio: 1.949677e-03	ci left: 4.823579e-01	ci right 4.832994e-01	k: 2090648	n:4330000
GLI2   4330000 perm   7918 sec   (547 perm/sec)   p_kst 4.828286e-01   p_cons 2.383372e-04   p_joint 1.953811e-04

Joint ci ratio: 1.344417e-01	ci left: 1.826842e-04	ci right 2.092344e-04	k: 849	n:4340000
Cons ci ratio: 1.217152e-01	ci left: 2.243949e-04	ci right 2.536980e-04	k: 1036	n:4340000
KS ci ratio: 1.947460e-03	ci left: 4.823507e-01	ci right 4.832912e-01	k: 2095443	n:4340000
GLI2   4340000 perm   7953 sec   (546 perm/sec)   p_kst 4.828210e-01   p_cons 2.387097e-04   p_joint 1.956221e-04

Joint ci ratio: 1.342838e-01	ci left: 1.827085e-04	ci right 2.092286e-04	k: 851	n:4350000
Cons ci ratio: 1.214811e-01	ci left: 2.247707e-04	ci right 2.540623e-04	k: 1040	n:4350000
KS ci ratio: 1.945174e-03	ci left: 4.823630e-01	ci right 4.833024e-01	k: 2100322	n:4350000
GLI2   4350000 perm   7987 sec   (545 perm/sec)   p_kst 4.828326e-01   p_cons 2.390805e-04   p_joint 1.956322e-04

Joint ci ratio: 1.342838e-01	ci left: 1.822895e-04	ci right 2.087487e-04	k: 851	n:4360000
Cons ci ratio: 1.213646e-01	ci left: 2.246999e-04	ci right 2.539522e-04	k: 1042	n:4360000
KS ci ratio: 1.942920e-03	ci left: 4.823691e-01	ci right 4.833075e-01	k: 2105175	n:4360000
GLI2   4360000 perm   8022 sec   (544 perm/sec)   p_kst 4.828383e-01   p_cons 2.389908e-04   p_joint 1.951835e-04

Joint ci ratio: 1.339697e-01	ci left: 1.827570e-04	ci right 2.092171e-04	k: 855	n:4370000
Cons ci ratio: 1.213064e-01	ci left: 2.244076e-04	ci right 2.536068e-04	k: 1043	n:4370000
KS ci ratio: 1.940724e-03	ci left: 4.823625e-01	ci right 4.832998e-01	k: 2109972	n:4370000
GLI2   4370000 perm   8056 sec   (542 perm/sec)   p_kst 4.828311e-01   p_cons 2.386728e-04   p_joint 1.956522e-04

Joint ci ratio: 1.338135e-01	ci left: 1.827810e-04	ci right 2.092113e-04	k: 857	n:4380000
Cons ci ratio: 1.211904e-01	ci left: 2.243380e-04	ci right 2.534983e-04	k: 1045	n:4380000
KS ci ratio: 1.938510e-03	ci left: 4.823623e-01	ci right 4.832985e-01	k: 2114797	n:4380000
GLI2   4380000 perm   8091 sec   (541 perm/sec)   p_kst 4.828304e-01   p_cons 2.385845e-04   p_joint 1.956621e-04

Joint ci ratio: 1.335801e-01	ci left: 1.830252e-04	ci right 2.094410e-04	k: 860	n:4390000
Cons ci ratio: 1.210170e-01	ci left: 2.244897e-04	ci right 2.536249e-04	k: 1048	n:4390000
KS ci ratio: 1.936327e-03	ci left: 4.823561e-01	ci right 4.832913e-01	k: 2119596	n:4390000
GLI2   4390000 perm   8125 sec   (540 perm/sec)   p_kst 4.828237e-01   p_cons 2.387244e-04   p_joint 1.958998e-04

Joint ci ratio: 1.335802e-01	ci left: 1.826092e-04	ci right 2.089650e-04	k: 860	n:4400000
Cons ci ratio: 1.209018e-01	ci left: 2.244203e-04	ci right 2.535168e-04	k: 1050	n:4400000
KS ci ratio: 1.934100e-03	ci left: 4.823632e-01	ci right 4.832973e-01	k: 2124453	n:4400000
GLI2   4400000 perm   8159 sec   (539 perm/sec)   p_kst 4.828302e-01   p_cons 2.386364e-04   p_joint 1.954545e-04

Joint ci ratio: 1.334253e-01	ci left: 1.826335e-04	ci right 2.089598e-04	k: 862	n:4410000
Cons ci ratio: 1.207869e-01	ci left: 2.243512e-04	ci right 2.534091e-04	k: 1052	n:4410000
KS ci ratio: 1.931863e-03	ci left: 4.823748e-01	ci right 4.833078e-01	k: 2129330	n:4410000
GLI2   4410000 perm   8193 sec   (538 perm/sec)   p_kst 4.828413e-01   p_cons 2.385488e-04   p_joint 1.954649e-04

Joint ci ratio: 1.331940e-01	ci left: 1.828764e-04	ci right 2.091884e-04	k: 865	n:4420000
Cons ci ratio: 1.207870e-01	ci left: 2.238436e-04	ci right 2.528358e-04	k: 1052	n:4420000
KS ci ratio: 1.929707e-03	ci left: 4.823675e-01	ci right 4.832995e-01	k: 2134124	n:4420000
GLI2   4420000 perm   8229 sec   (537 perm/sec)   p_kst 4.828335e-01   p_cons 2.380090e-04   p_joint 1.957014e-04

Joint ci ratio: 1.329638e-01	ci left: 1.831183e-04	ci right 2.094159e-04	k: 868	n:4430000
Cons ci ratio: 1.206724e-01	ci left: 2.237761e-04	ci right 2.527302e-04	k: 1054	n:4430000
KS ci ratio: 1.927519e-03	ci left: 4.823702e-01	ci right 4.833011e-01	k: 2138962	n:4430000
GLI2   4430000 perm   8264 sec   (536 perm/sec)   p_kst 4.828357e-01   p_cons 2.379233e-04   p_joint 1.959368e-04

Joint ci ratio: 1.386671e-01	ci left: 1.674754e-04	ci right 1.926435e-04	k: 798	n:4440000
Cons ci ratio: 1.205582e-01	ci left: 2.237090e-04	ci right 2.526250e-04	k: 1056	n:4440000
KS ci ratio: 1.925373e-03	ci left: 4.823641e-01	ci right 4.832940e-01	k: 2143761	n:4440000
GLI2   4440000 perm   8299 sec   (535 perm/sec)   p_kst 4.828291e-01   p_cons 2.378378e-04   p_joint 1.797297e-04

Joint ci ratio: 1.384075e-01	ci left: 1.677499e-04	ci right 1.929081e-04	k: 801	n:4450000
Cons ci ratio: 1.203307e-01	ci left: 2.240781e-04	ci right 2.529832e-04	k: 1060	n:4450000
KS ci ratio: 1.923181e-03	ci left: 4.823716e-01	ci right 4.833004e-01	k: 2148620	n:4450000
GLI2   4450000 perm   8334 sec   (534 perm/sec)   p_kst 4.828360e-01   p_cons 2.382022e-04   p_joint 1.800000e-04

Joint ci ratio: 1.437989e-01	ci left: 1.546118e-04	ci right 1.787804e-04	k: 742	n:4460000
Cons ci ratio: 1.201610e-01	ci left: 2.242281e-04	ci right 2.531089e-04	k: 1063	n:4460000
KS ci ratio: 1.921064e-03	ci left: 4.823617e-01	ci right 4.832894e-01	k: 2153402	n:4460000
GLI2   4460000 perm   8369 sec   (533 perm/sec)   p_kst 4.828256e-01   p_cons 2.383408e-04   p_joint 1.663677e-04

Joint ci ratio: 1.437989e-01	ci left: 1.542659e-04	ci right 1.783804e-04	k: 742	n:4470000
Cons ci ratio: 1.201610e-01	ci left: 2.237265e-04	ci right 2.525426e-04	k: 1063	n:4470000
KS ci ratio: 1.918946e-03	ci left: 4.823539e-01	ci right 4.832806e-01	k: 2158193	n:4470000
GLI2   4470000 perm   8404 sec   (532 perm/sec)   p_kst 4.828172e-01   p_cons 2.378076e-04   p_joint 1.659955e-04

Joint ci ratio: 1.434133e-01	ci left: 1.547823e-04	ci right 1.789072e-04	k: 746	n:4480000
Cons ci ratio: 1.200482e-01	ci left: 2.236601e-04	ci right 2.524388e-04	k: 1065	n:4480000
KS ci ratio: 1.916817e-03	ci left: 4.823508e-01	ci right 4.832765e-01	k: 2163005	n:4480000
GLI2   4480000 perm   8439 sec   (531 perm/sec)   p_kst 4.828136e-01   p_cons 2.377232e-04   p_joint 1.665179e-04

Joint ci ratio: 1.434134e-01	ci left: 1.544376e-04	ci right 1.785087e-04	k: 746	n:4490000
Cons ci ratio: 1.199358e-01	ci left: 2.235940e-04	ci right 2.523353e-04	k: 1067	n:4490000
KS ci ratio: 1.914684e-03	ci left: 4.823506e-01	ci right 4.832752e-01	k: 2167830	n:4490000
GLI2   4490000 perm   8475 sec   (530 perm/sec)   p_kst 4.828129e-01   p_cons 2.376392e-04   p_joint 1.661470e-04

Joint ci ratio: 1.076342e-01	ci left: 2.788039e-04	ci right 3.107337e-04	k: 1325	n:4500000
Cons ci ratio: 1.197118e-01	ci left: 2.239594e-04	ci right 2.526901e-04	k: 1071	n:4500000
KS ci ratio: 1.912552e-03	ci left: 4.823520e-01	ci right 4.832756e-01	k: 2172662	n:4500000
GLI2   4500000 perm   8510 sec   (529 perm/sec)   p_kst 4.828138e-01   p_cons 2.380000e-04   p_joint 2.944444e-04

Joint ci ratio: 1.074318e-01	ci left: 2.792646e-04	ci right 3.111832e-04	k: 1330	n:4510000
Cons ci ratio: 1.195446e-01	ci left: 2.241081e-04	ci right 2.528149e-04	k: 1074	n:4510000
KS ci ratio: 1.910474e-03	ci left: 4.823412e-01	ci right 4.832637e-01	k: 2177439	n:4510000
GLI2   4510000 perm   8545 sec   (528 perm/sec)   p_kst 4.828024e-01   p_cons 2.381375e-04   p_joint 2.949002e-04

Joint ci ratio: 1.073109e-01	ci left: 2.792926e-04	ci right 3.111762e-04	k: 1333	n:4520000
Cons ci ratio: 1.192123e-01	ci left: 2.249001e-04	ci right 2.536226e-04	k: 1080	n:4520000
KS ci ratio: 1.908363e-03	ci left: 4.823408e-01	ci right 4.832623e-01	k: 2182263	n:4520000
GLI2   4520000 perm   8580 sec   (527 perm/sec)   p_kst 4.828015e-01   p_cons 2.389381e-04   p_joint 2.949115e-04

Joint ci ratio: 1.072708e-01	ci left: 2.788909e-04	ci right 3.107160e-04	k: 1334	n:4530000
Cons ci ratio: 1.189376e-01	ci left: 2.254745e-04	ci right 2.541994e-04	k: 1085	n:4530000
KS ci ratio: 1.906254e-03	ci left: 4.823417e-01	ci right 4.832623e-01	k: 2187093	n:4530000
GLI2   4530000 perm   8616 sec   (526 perm/sec)   p_kst 4.828020e-01   p_cons 2.395143e-04   p_joint 2.944812e-04

Joint ci ratio: 1.072306e-01	ci left: 2.784910e-04	ci right 3.102578e-04	k: 1335	n:4540000
Cons ci ratio: 1.187736e-01	ci left: 2.256190e-04	ci right 2.543199e-04	k: 1088	n:4540000
KS ci ratio: 1.904193e-03	ci left: 4.823319e-01	ci right 4.832514e-01	k: 2191874	n:4540000
GLI2   4540000 perm   8652 sec   (525 perm/sec)   p_kst 4.827916e-01   p_cons 2.396476e-04   p_joint 2.940529e-04

Joint ci ratio: 1.071104e-01	ci left: 2.785206e-04	ci right 3.102529e-04	k: 1338	n:4550000
Cons ci ratio: 1.187191e-01	ci left: 2.253364e-04	ci right 2.539872e-04	k: 1089	n:4550000
KS ci ratio: 1.902059e-03	ci left: 4.823429e-01	ci right 4.832615e-01	k: 2196750	n:4550000
GLI2   4550000 perm   8688 sec   (524 perm/sec)   p_kst 4.828022e-01   p_cons 2.393407e-04   p_joint 2.940659e-04

Joint ci ratio: 1.070705e-01	ci left: 2.781232e-04	ci right 3.097977e-04	k: 1339	n:4560000
Cons ci ratio: 1.187192e-01	ci left: 2.248422e-04	ci right 2.534302e-04	k: 1089	n:4560000
KS ci ratio: 1.899959e-03	ci left: 4.823470e-01	ci right 4.832645e-01	k: 2201594	n:4560000
GLI2   4560000 perm   8725 sec   (523 perm/sec)   p_kst 4.828057e-01   p_cons 2.388158e-04   p_joint 2.936404e-04

Joint ci ratio: 1.068315e-01	ci left: 2.787924e-04	ci right 3.104678e-04	k: 1345	n:4570000
Cons ci ratio: 1.183937e-01	ci left: 2.256242e-04	ci right 2.542275e-04	k: 1095	n:4570000
KS ci ratio: 1.897913e-03	ci left: 4.823385e-01	ci right 4.832550e-01	k: 2206381	n:4570000
GLI2   4570000 perm   8761 sec   (522 perm/sec)   p_kst 4.827967e-01   p_cons 2.396061e-04   p_joint 2.943107e-04

Joint ci ratio: 1.094238e-01	ci left: 2.648001e-04	ci right 2.956628e-04	k: 1282	n:4580000
Cons ci ratio: 1.183398e-01	ci left: 2.253435e-04	ci right 2.538972e-04	k: 1096	n:4580000
KS ci ratio: 1.895837e-03	ci left: 4.823396e-01	ci right 4.832551e-01	k: 2211212	n:4580000
GLI2   4580000 perm   8797 sec   (521 perm/sec)   p_kst 4.827974e-01   p_cons 2.393013e-04   p_joint 2.799127e-04

Joint ci ratio: 1.043042e-01	ci left: 2.915772e-04	ci right 3.238734e-04	k: 1411	n:4590000
Cons ci ratio: 1.180710e-01	ci left: 2.259096e-04	ci right 2.544656e-04	k: 1101	n:4590000
KS ci ratio: 1.893803e-03	ci left: 4.823316e-01	ci right 4.832462e-01	k: 2216001	n:4590000
GLI2   4590000 perm   8834 sec   (520 perm/sec)   p_kst 4.827889e-01   p_cons 2.398693e-04   p_joint 3.074074e-04

Joint ci ratio: 1.041568e-01	ci left: 2.917903e-04	ci right 3.240616e-04	k: 1415	n:4600000
Cons ci ratio: 1.179106e-01	ci left: 2.260515e-04	ci right 2.545838e-04	k: 1104	n:4600000
KS ci ratio: 1.891730e-03	ci left: 4.823359e-01	ci right 4.832494e-01	k: 2220846	n:4600000
GLI2   4600000 perm   8870 sec   (519 perm/sec)   p_kst 4.827926e-01   p_cons 2.400000e-04   p_joint 3.076087e-04

Joint ci ratio: 1.040833e-01	ci left: 2.915798e-04	ci right 3.238038e-04	k: 1417	n:4610000
Cons ci ratio: 1.178040e-01	ci left: 2.259821e-04	ci right 2.544782e-04	k: 1106	n:4610000
KS ci ratio: 1.889617e-03	ci left: 4.823522e-01	ci right 4.832647e-01	k: 2225747	n:4610000
GLI2   4610000 perm   8906 sec   (518 perm/sec)   p_kst 4.828085e-01   p_cons 2.399132e-04   p_joint 3.073753e-04

Joint ci ratio: 1.060854e-01	ci left: 2.797782e-04	ci right 3.113298e-04	k: 1364	n:4620000
Cons ci ratio: 1.177509e-01	ci left: 2.257031e-04	ci right 2.541502e-04	k: 1107	n:4620000
KS ci ratio: 1.887534e-03	ci left: 4.823624e-01	ci right 4.832740e-01	k: 2230620	n:4620000
GLI2   4620000 perm   8942 sec   (517 perm/sec)   p_kst 4.828182e-01   p_cons 2.396104e-04   p_joint 2.952381e-04

Joint ci ratio: 1.060078e-01	ci left: 2.795945e-04	ci right 3.111008e-04	k: 1366	n:4630000
Cons ci ratio: 1.175389e-01	ci left: 2.260541e-04	ci right 2.544906e-04	k: 1111	n:4630000
KS ci ratio: 1.885526e-03	ci left: 4.823545e-01	ci right 4.832650e-01	k: 2235409	n:4630000
GLI2   4630000 perm   8979 sec   (516 perm/sec)   p_kst 4.828097e-01   p_cons 2.399568e-04   p_joint 2.950324e-04

Joint ci ratio: 1.036819e-01	ci left: 2.920037e-04	ci right 3.241425e-04	k: 1428	n:4640000
Cons ci ratio: 1.174333e-01	ci left: 2.259853e-04	ci right 2.543859e-04	k: 1113	n:4640000
KS ci ratio: 1.883572e-03	ci left: 4.823342e-01	ci right 4.832438e-01	k: 2240141	n:4640000
GLI2   4640000 perm   9016 sec   (515 perm/sec)   p_kst 4.827890e-01   p_cons 2.398707e-04   p_joint 3.077586e-04

Joint ci ratio: 1.034649e-01	ci left: 2.926327e-04	ci right 3.247691e-04	k: 1434	n:4650000
Cons ci ratio: 1.173280e-01	ci left: 2.259168e-04	ci right 2.542815e-04	k: 1115	n:4650000
KS ci ratio: 1.881509e-03	ci left: 4.823444e-01	ci right 4.832530e-01	k: 2245014	n:4650000
GLI2   4650000 perm   9054 sec   (514 perm/sec)   p_kst 4.827987e-01   p_cons 2.397849e-04   p_joint 3.083871e-04

Joint ci ratio: 1.033210e-01	ci left: 2.928409e-04	ci right 3.249527e-04	k: 1438	n:4660000
Cons ci ratio: 1.171706e-01	ci left: 2.260569e-04	ci right 2.543985e-04	k: 1118	n:4660000
KS ci ratio: 1.879455e-03	ci left: 4.823539e-01	ci right 4.832615e-01	k: 2249884	n:4660000
GLI2   4660000 perm   9090 sec   (513 perm/sec)   p_kst 4.828077e-01   p_cons 2.399142e-04   p_joint 3.085837e-04

Joint ci ratio: 1.032851e-01	ci left: 2.924224e-04	ci right 3.244766e-04	k: 1439	n:4670000
Cons ci ratio: 1.170661e-01	ci left: 2.259885e-04	ci right 2.542946e-04	k: 1120	n:4670000
KS ci ratio: 1.877485e-03	ci left: 4.823428e-01	ci right 4.832495e-01	k: 2254658	n:4670000
GLI2   4670000 perm   9127 sec   (512 perm/sec)   p_kst 4.827961e-01   p_cons 2.398287e-04   p_joint 3.081370e-04

Joint ci ratio: 1.032135e-01	ci left: 2.922139e-04	ci right 3.242216e-04	k: 1441	n:4680000
Cons ci ratio: 1.169097e-01	ci left: 2.261279e-04	ci right 2.544110e-04	k: 1123	n:4680000
KS ci ratio: 1.875444e-03	ci left: 4.823523e-01	ci right 4.832580e-01	k: 2259528	n:4680000
GLI2   4680000 perm   9165 sec   (511 perm/sec)   p_kst 4.828051e-01   p_cons 2.399573e-04   p_joint 3.079060e-04

Joint ci ratio: 1.030706e-01	ci left: 2.924217e-04	ci right 3.244052e-04	k: 1445	n:4690000
Cons ci ratio: 1.167540e-01	ci left: 2.262667e-04	ci right 2.545269e-04	k: 1126	n:4690000
KS ci ratio: 1.873493e-03	ci left: 4.823398e-01	ci right 4.832445e-01	k: 2264295	n:4690000
GLI2   4690000 perm   9202 sec   (510 perm/sec)   p_kst 4.827921e-01   p_cons 2.400853e-04   p_joint 3.081023e-04

Joint ci ratio: 1.030350e-01	ci left: 2.920068e-04	ci right 3.239332e-04	k: 1446	n:4700000
Cons ci ratio: 1.166506e-01	ci left: 2.261984e-04	ci right 2.544233e-04	k: 1128	n:4700000
KS ci ratio: 1.871522e-03	ci left: 4.823339e-01	ci right 4.832376e-01	k: 2269093	n:4700000
GLI2   4700000 perm   9239 sec   (509 perm/sec)   p_kst 4.827857e-01   p_cons 2.400000e-04   p_joint 3.076596e-04

Joint ci ratio: 1.029284e-01	ci left: 2.920074e-04	ci right 3.238988e-04	k: 1449	n:4710000
Cons ci ratio: 1.165474e-01	ci left: 2.261304e-04	ci right 2.543201e-04	k: 1130	n:4710000
KS ci ratio: 1.869591e-03	ci left: 4.823193e-01	ci right 4.832221e-01	k: 2273850	n:4710000
GLI2   4710000 perm   9276 sec   (508 perm/sec)   p_kst 4.827707e-01   p_cons 2.399151e-04   p_joint 3.076433e-04

Joint ci ratio: 1.028221e-01	ci left: 2.920080e-04	ci right 3.238645e-04	k: 1452	n:4720000
Cons ci ratio: 1.164959e-01	ci left: 2.258570e-04	ci right 2.539993e-04	k: 1131	n:4720000
KS ci ratio: 1.867668e-03	ci left: 4.823042e-01	ci right 4.832060e-01	k: 2278604	n:4720000
GLI2   4720000 perm   9313 sec   (507 perm/sec)   p_kst 4.827551e-01   p_cons 2.396186e-04   p_joint 3.076271e-04

Joint ci ratio: 1.025752e-01	ci left: 2.928325e-04	ci right 3.246977e-04	k: 1459	n:4730000
Cons ci ratio: 1.162906e-01	ci left: 2.262006e-04	ci right 2.543326e-04	k: 1135	n:4730000
KS ci ratio: 1.865767e-03	ci left: 4.822847e-01	ci right 4.831855e-01	k: 2283337	n:4730000
GLI2   4730000 perm   9350 sec   (506 perm/sec)   p_kst 4.827351e-01   p_cons 2.399577e-04   p_joint 3.084567e-04

Joint ci ratio: 1.005628e-01	ci left: 3.043459e-04	ci right 3.367759e-04	k: 1518	n:4740000
Cons ci ratio: 1.161374e-01	ci left: 2.263379e-04	ci right 2.544473e-04	k: 1138	n:4740000
KS ci ratio: 1.863827e-03	ci left: 4.822775e-01	ci right 4.831774e-01	k: 2288128	n:4740000
GLI2   4740000 perm   9387 sec   (505 perm/sec)   p_kst 4.827274e-01   p_cons 2.400844e-04   p_joint 3.202532e-04

Joint ci ratio: 1.004637e-01	ci left: 3.043209e-04	ci right 3.367144e-04	k: 1521	n:4750000
Cons ci ratio: 1.159847e-01	ci left: 2.264746e-04	ci right 2.545615e-04	k: 1141	n:4750000
KS ci ratio: 1.861914e-03	ci left: 4.822644e-01	ci right 4.831634e-01	k: 2292891	n:4750000
GLI2   4750000 perm   9425 sec   (504 perm/sec)   p_kst 4.827139e-01   p_cons 2.402105e-04   p_joint 3.202105e-04

Joint ci ratio: 1.003978e-01	ci left: 3.040912e-04	ci right 3.364377e-04	k: 1523	n:4760000
Cons ci ratio: 1.159847e-01	ci left: 2.259988e-04	ci right 2.540268e-04	k: 1141	n:4760000
KS ci ratio: 1.859962e-03	ci left: 4.822636e-01	ci right 4.831616e-01	k: 2297712	n:4760000
GLI2   4760000 perm   9462 sec   (503 perm/sec)   p_kst 4.827126e-01   p_cons 2.397059e-04   p_joint 3.199580e-04

Joint ci ratio: 1.002991e-01	ci left: 3.040668e-04	ci right 3.363771e-04	k: 1526	n:4770000
Cons ci ratio: 1.159340e-01	ci left: 2.257286e-04	ci right 2.537099e-04	k: 1142	n:4770000
KS ci ratio: 1.858055e-03	ci left: 4.822523e-01	ci right 4.831494e-01	k: 2302483	n:4770000
GLI2   4770000 perm   9500 sec   (502 perm/sec)   p_kst 4.827008e-01   p_cons 2.394130e-04   p_joint 3.199161e-04

Joint ci ratio: 1.001026e-01	ci left: 3.046545e-04	ci right 3.369600e-04	k: 1532	n:4780000
Cons ci ratio: 1.158327e-01	ci left: 2.256626e-04	ci right 2.536097e-04	k: 1144	n:4780000
KS ci ratio: 1.856104e-03	ci left: 4.822545e-01	ci right 4.831506e-01	k: 2307318	n:4780000
GLI2   4780000 perm   9537 sec   (501 perm/sec)   p_kst 4.827025e-01   p_cons 2.393305e-04   p_joint 3.205021e-04

Joint ci ratio: 1.000048e-01	ci left: 3.046291e-04	ci right 3.368985e-04	k: 1535	n:4790000
Cons ci ratio: 1.156309e-01	ci left: 2.260024e-04	ci right 2.539395e-04	k: 1148	n:4790000
KS ci ratio: 1.854124e-03	ci left: 4.822662e-01	ci right 4.831614e-01	k: 2312199	n:4790000
GLI2   4790000 perm   9575 sec   (500 perm/sec)   p_kst 4.827138e-01   p_cons 2.396660e-04   p_joint 3.204593e-04

Joint ci ratio: 9.990727e-02	ci left: 3.046038e-04	ci right 3.368373e-04	k: 1538	n:4800000
Cons ci ratio: 1.154301e-01	ci left: 2.263409e-04	ci right 2.542678e-04	k: 1152	n:4800000
KS ci ratio: 1.852156e-03	ci left: 4.822762e-01	ci right 4.831705e-01	k: 2317072	n:4800000
GLI2   4800000 perm   9613 sec   (499 perm/sec)   p_kst 4.827233e-01   p_cons 2.400000e-04   p_joint 3.204167e-04

Joint ci ratio: 9.974535e-02	ci left: 3.049841e-04	ci right 3.372025e-04	k: 1543	n:4810000
Cons ci ratio: 1.153801e-01	ci left: 2.260722e-04	ci right 2.539531e-04	k: 1153	n:4810000
KS ci ratio: 1.850186e-03	ci left: 4.822885e-01	ci right 4.831818e-01	k: 2321956	n:4810000
GLI2   4810000 perm   9651 sec   (498 perm/sec)   p_kst 4.827351e-01   p_cons 2.397089e-04   p_joint 3.207900e-04

Joint ci ratio: 9.964859e-02	ci left: 3.049582e-04	ci right 3.371408e-04	k: 1546	n:4820000
Cons ci ratio: 1.152803e-01	ci left: 2.260061e-04	ci right 2.538531e-04	k: 1155	n:4820000
KS ci ratio: 1.848262e-03	ci left: 4.822899e-01	ci right 4.831823e-01	k: 2326788	n:4820000
GLI2   4820000 perm   9689 sec   (497 perm/sec)   p_kst 4.827361e-01   p_cons 2.396266e-04   p_joint 3.207469e-04

Joint ci ratio: 9.961642e-02	ci left: 3.045287e-04	ci right 3.366550e-04	k: 1547	n:4830000
Cons ci ratio: 1.152305e-01	ci left: 2.257393e-04	ci right 2.535406e-04	k: 1156	n:4830000
KS ci ratio: 1.846308e-03	ci left: 4.823013e-01	ci right 4.831928e-01	k: 2331668	n:4830000
GLI2   4830000 perm   9728 sec   (497 perm/sec)   p_kst 4.827470e-01   p_cons 2.393375e-04   p_joint 3.202899e-04

Joint ci ratio: 9.955214e-02	ci left: 3.043025e-04	ci right 3.363829e-04	k: 1549	n:4840000
Cons ci ratio: 1.150318e-01	ci left: 2.260755e-04	ci right 2.538670e-04	k: 1160	n:4840000
KS ci ratio: 1.844454e-03	ci left: 4.822870e-01	ci right 4.831775e-01	k: 2336424	n:4840000
GLI2   4840000 perm   9767 sec   (496 perm/sec)   p_kst 4.827322e-01   p_cons 2.396694e-04   p_joint 3.200413e-04

Joint ci ratio: 9.948799e-02	ci left: 3.040771e-04	ci right 3.361120e-04	k: 1551	n:4850000
Cons ci ratio: 1.149823e-01	ci left: 2.258096e-04	ci right 2.535556e-04	k: 1161	n:4850000
KS ci ratio: 1.842509e-03	ci left: 4.822989e-01	ci right 4.831885e-01	k: 2341307	n:4850000
GLI2   4850000 perm   9806 sec   (495 perm/sec)   p_kst 4.827437e-01   p_cons 2.393814e-04   p_joint 3.197938e-04

Joint ci ratio: 9.942396e-02	ci left: 3.038528e-04	ci right 3.358421e-04	k: 1553	n:4860000
Cons ci ratio: 1.149329e-01	ci left: 2.255448e-04	ci right 2.532456e-04	k: 1162	n:4860000
KS ci ratio: 1.840605e-03	ci left: 4.823013e-01	ci right 4.831901e-01	k: 2346144	n:4860000
GLI2   4860000 perm   9846 sec   (494 perm/sec)   p_kst 4.827457e-01   p_cons 2.390947e-04   p_joint 3.195473e-04

Joint ci ratio: 9.936006e-02	ci left: 3.036293e-04	ci right 3.355734e-04	k: 1555	n:4870000
Cons ci ratio: 1.148342e-01	ci left: 2.254806e-04	ci right 2.531481e-04	k: 1164	n:4870000
KS ci ratio: 1.838712e-03	ci left: 4.823025e-01	ci right 4.831903e-01	k: 2350975	n:4870000
GLI2   4870000 perm   9885 sec   (493 perm/sec)   p_kst 4.827464e-01   p_cons 2.390144e-04   p_joint 3.193018e-04

Joint ci ratio: 9.923258e-02	ci left: 3.038064e-04	ci right 3.357258e-04	k: 1559	n:4880000
Cons ci ratio: 1.145885e-01	ci left: 2.260137e-04	ci right 2.536833e-04	k: 1169	n:4880000
KS ci ratio: 1.836846e-03	ci left: 4.822977e-01	ci right 4.831847e-01	k: 2355777	n:4880000
GLI2   4880000 perm   9922 sec   (492 perm/sec)   p_kst 4.827412e-01   p_cons 2.395492e-04   p_joint 3.194672e-04

Joint ci ratio: 9.913731e-02	ci left: 3.037834e-04	ci right 3.356679e-04	k: 1562	n:4890000
Cons ci ratio: 1.145396e-01	ci left: 2.257502e-04	ci right 2.533749e-04	k: 1170	n:4890000
KS ci ratio: 1.834978e-03	ci left: 4.822953e-01	ci right 4.831813e-01	k: 2360590	n:4890000
GLI2   4890000 perm   9961 sec   (491 perm/sec)   p_kst 4.827382e-01   p_cons 2.392638e-04   p_joint 3.194274e-04

Joint ci ratio: 9.904230e-02	ci left: 3.037605e-04	ci right 3.356103e-04	k: 1565	n:4900000
Cons ci ratio: 1.143931e-01	ci left: 2.258842e-04	ci right 2.534875e-04	k: 1173	n:4900000
KS ci ratio: 1.833091e-03	ci left: 4.822993e-01	ci right 4.831844e-01	k: 2365435	n:4900000
GLI2   4900000 perm   10000 sec   (490 perm/sec)   p_kst 4.827418e-01   p_cons 2.393878e-04   p_joint 3.193878e-04

Joint ci ratio: 9.891605e-02	ci left: 3.039364e-04	ci right 3.357616e-04	k: 1569	n:4910000
Cons ci ratio: 1.142958e-01	ci left: 2.258198e-04	ci right 2.533902e-04	k: 1175	n:4910000
KS ci ratio: 1.831279e-03	ci left: 4.822846e-01	ci right 4.831688e-01	k: 2370188	n:4910000
GLI2   4910000 perm   10039 sec   (489 perm/sec)   p_kst 4.827267e-01   p_cons 2.393075e-04   p_joint 3.195519e-04

Joint ci ratio: 9.888458e-02	ci left: 3.035168e-04	ci right 3.352874e-04	k: 1570	n:4920000
Cons ci ratio: 1.141988e-01	ci left: 2.257557e-04	ci right 2.532933e-04	k: 1177	n:4920000
KS ci ratio: 1.829441e-03	ci left: 4.822785e-01	ci right 4.831618e-01	k: 2374983	n:4920000
GLI2   4920000 perm   10078 sec   (488 perm/sec)   p_kst 4.827201e-01   p_cons 2.392276e-04   p_joint 3.191057e-04

Joint ci ratio: 9.885315e-02	ci left: 3.030990e-04	ci right 3.348152e-04	k: 1571	n:4930000
Cons ci ratio: 1.140053e-01	ci left: 2.260860e-04	ci right 2.536141e-04	k: 1181	n:4930000
KS ci ratio: 1.827575e-03	ci left: 4.822815e-01	ci right 4.831639e-01	k: 2379823	n:4930000
GLI2   4930000 perm   10116 sec   (487 perm/sec)   p_kst 4.827227e-01   p_cons 2.395538e-04   p_joint 3.186613e-04

Joint ci ratio: 9.875896e-02	ci left: 3.030777e-04	ci right 3.347597e-04	k: 1574	n:4940000
Cons ci ratio: 1.139090e-01	ci left: 2.260217e-04	ci right 2.535171e-04	k: 1183	n:4940000
KS ci ratio: 1.825743e-03	ci left: 4.822769e-01	ci right 4.831584e-01	k: 2384625	n:4940000
GLI2   4940000 perm   10155 sec   (486 perm/sec)   p_kst 4.827176e-01   p_cons 2.394737e-04   p_joint 3.186235e-04

Joint ci ratio: 9.863378e-02	ci left: 3.032536e-04	ci right 3.349115e-04	k: 1578	n:4950000
Cons ci ratio: 1.137171e-01	ci left: 2.263501e-04	ci right 2.538360e-04	k: 1187	n:4950000
KS ci ratio: 1.823873e-03	ci left: 4.822843e-01	ci right 4.831650e-01	k: 2389487	n:4950000
GLI2   4950000 perm   10194 sec   (486 perm/sec)   p_kst 4.827246e-01   p_cons 2.397980e-04   p_joint 3.187879e-04

Joint ci ratio: 9.847797e-02	ci left: 3.036254e-04	ci right 3.352691e-04	k: 1583	n:4960000
Cons ci ratio: 1.136215e-01	ci left: 2.262855e-04	ci right 2.537389e-04	k: 1189	n:4960000
KS ci ratio: 1.822004e-03	ci left: 4.822928e-01	ci right 4.831725e-01	k: 2394354	n:4960000
GLI2   4960000 perm   10232 sec   (485 perm/sec)   p_kst 4.827327e-01   p_cons 2.397177e-04   p_joint 3.191532e-04

Joint ci ratio: 9.832289e-02	ci left: 3.039958e-04	ci right 3.356253e-04	k: 1588	n:4970000
Cons ci ratio: 1.134310e-01	ci left: 2.266122e-04	ci right 2.540560e-04	k: 1193	n:4970000
KS ci ratio: 1.820235e-03	ci left: 4.822755e-01	ci right 4.831543e-01	k: 2399093	n:4970000
GLI2   4970000 perm   10272 sec   (484 perm/sec)   p_kst 4.827149e-01   p_cons 2.400402e-04   p_joint 3.195171e-04

Joint ci ratio: 9.819936e-02	ci left: 3.041688e-04	ci right 3.357743e-04	k: 1592	n:4980000
Cons ci ratio: 1.132887e-01	ci left: 2.267425e-04	ci right 2.541654e-04	k: 1196	n:4980000
KS ci ratio: 1.818450e-03	ci left: 4.822638e-01	ci right 4.831418e-01	k: 2403860	n:4980000
GLI2   4980000 perm   10311 sec   (483 perm/sec)   p_kst 4.827028e-01   p_cons 2.401606e-04   p_joint 3.196787e-04

Joint ci ratio: 9.813779e-02	ci left: 3.039502e-04	ci right 3.355121e-04	k: 1594	n:4990000
Cons ci ratio: 1.130999e-01	ci left: 2.270670e-04	ci right 2.544803e-04	k: 1200	n:4990000
KS ci ratio: 1.816615e-03	ci left: 4.822677e-01	ci right 4.831448e-01	k: 2408704	n:4990000
GLI2   4990000 perm   10349 sec   (482 perm/sec)   p_kst 4.827062e-01   p_cons 2.404810e-04   p_joint 3.194389e-04

Joint ci ratio: 9.804563e-02	ci left: 3.039276e-04	ci right 3.354558e-04	k: 1597	n:5000000
Cons ci ratio: 1.130059e-01	ci left: 2.270016e-04	ci right 2.543826e-04	k: 1202	n:5000000
KS ci ratio: 1.814765e-03	ci left: 4.822771e-01	ci right 4.831533e-01	k: 2413576	n:5000000
GLI2   5000000 perm   10388 sec   (481 perm/sec)   p_kst 4.827152e-01   p_cons 2.404000e-04   p_joint 3.194000e-04

Outputting figure to mutsig2_images.part000000000071/GLI2.3_4813_5000000_0.48272_0.0002404_0.0003194.png
                gene_name: GLI2
               theta_stop: 0.11 
                    nperm: 5000000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.48 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.00024 
      ci_cons_bounds_left: 0.00023 
     ci_cons_bounds_right: 0.00025 
                  p_joint: 0.00032 
     ci_joint_bounds_left: 0.00030 
    ci_joint_bounds_right: 0.00034 

Current progress: 50 percent done.
GLP2R
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.299240e-02	ci left: 5.755702e-01	ci right 5.949801e-01	k: 5853	n:10000
Cons ci ratio: 3.950888e-02	ci left: 4.861529e-01	ci right 5.058495e-01	k: 4960	n:10000
KS ci ratio: 5.783299e-02	ci left: 3.056030e-01	ci right 3.239050e-01	k: 3147	n:10000
GLP2R   10000 perm   1 sec   (6779 perm/sec)   p_kst 3.147000e-01   p_cons 4.960000e-01   p_joint 5.853000e-01

Outputting figure to mutsig2_images.part000000000071/GLP2R.2_1714_10000_0.3147_0.496_0.5853.png
                gene_name: GLP2R
               theta_stop: 0.058 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.50 
      ci_cons_bounds_left: 0.49 
     ci_cons_bounds_right: 0.51 
                  p_joint: 0.59 
     ci_joint_bounds_left: 0.58 
    ci_joint_bounds_right: 0.59 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000071
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 71 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1642>
Subject: Job 8704217: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1642>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000072> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:36:41 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000072.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000072.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 72  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000072.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    252.23 sec.
    Max Memory :      6012 MB
    Max Swap   :      8619 MB

    Max Processes  :         7
    Max Threads    :        95

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
72
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 72
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 72: processing genes 6424 - 6513
Calculating significance of each gene.
Using projection method.
6424	GNA11	1
6425	GNA12	1
6426	GNA13	1
6427	GNA14	1
6428	GNA15	1.113033e-01
6429	GNAI1	1
6430	GNAI2	1
6431	GNAI3	1
6432	GNAL	8.556261e-03
6433	GNAO1	1
6434	GNAQ	1
6435	GNAS	1.736544e-02
6436	GNAT1	1
6437	GNAT2	1
6438	GNAT3	1
6439	GNAZ	1
6440	GNB1	1
6441	GNB1L	1
6442	GNB2	1
6443	GNB2L1	1
6444	GNB3	1
6445	GNB4	1
6446	GNB5	1
6447	GNE	1
6448	GNG10	1
6449	GNG11	1
6450	GNG12	1
6451	GNG13	1
6452	GNG2	1
6453	GNG3	1
6454	GNG4	1
6455	GNG5	1.112615e-02
6456	GNG7	1
6457	GNG8	1
6458	GNGT1	1.496217e-02
6459	GNGT2	1
6460	GNL1	9.675362e-02
6461	GNL2	1
6462	GNL3	1
In gene GNL3L the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 5	N = 1809    n = 1	mu =   6.83e-08
6463	GNL3L	7.272837e-02
6464	GNLY	1
6465	GNMT	1
6466	GNPAT	5.704040e-03
6467	GNPDA1	1
6468	GNPDA2	1
6469	GNPNAT1	1
6470	GNPTAB	3.176449e-01
6471	GNPTG	1
6472	GNRH1	1
6473	GNRH2	1
6474	GNRHR	1
6475	GNS	1
6476	GOLGA1	2.835224e-01
6477	GOLGA2	1
6478	GOLGA2B	1
6479	GOLGA3	1
6480	GOLGA4	3.710410e-01
6481	GOLGA5	2.801654e-01
6482	GOLGA6A	1
6483	GOLGA6B	1
6484	GOLGA6C	1.834709e-02
6485	GOLGA6D	1
6486	GOLGA7	1
6487	GOLGA7B	1
6488	GOLGB1	2.488894e-01
6489	GOLIM4	1
6490	GOLM1	1
6491	GOLPH3	1.032523e-01
6492	GOLPH3L	1
6493	GOLT1A	1
6494	GOLT1B	1
In gene GON4L the following bins exceed PROBCAP:
    THCA-ET-A2N4-TP	categ 5	N = 6208    n = 1	mu =   2.14e-07
6495	GON4L	2.259597e-01
6496	GOPC	1
6497	GORAB	1
6498	GORASP1	1
6499	GORASP2	1
6500	GOSR1	1
6501	GOSR2	1.737504e-02
6502	GOT1	1
6503	GOT1L1	1
6504	GOT2	1.087028e-01
6505	GP2	1
6506	GP5	1
6507	GP6	1
6508	GP9	1
6509	GPA33	1
6510	GPAA1	1
6511	GPAM	1
6512	GPAT2	5.601269e-02
6513	GPATCH1	2.183862e-01
Done

Running MutSig 2:
Scatter job 72: processing genes 6424 - 6513
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
GNAS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.736596e-03	ci left: 9.679427e-01	ci right 9.745790e-01	k: 9714	n:10000
Cons ci ratio: 6.197770e-03	ci left: 9.724899e-01	ci right 9.786288e-01	k: 9757	n:10000
KS ci ratio: 1.795547e-02	ci left: 8.190349e-01	ci right 8.339744e-01	k: 8266	n:10000
GNAS   10000 perm   2 sec   (5001 perm/sec)   p_kst 8.266000e-01   p_cons 9.757000e-01   p_joint 9.714000e-01

Outputting figure to mutsig2_images.part000000000072/GNAS.3_4054_10000_0.8266_0.9757_0.9714.png
                gene_name: GNAS
               theta_stop: 0.018 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.97 

Current progress: 20 percent done.
GNAL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.309370e-02	ci left: 3.433291e-01	ci right 3.621567e-01	k: 3527	n:10000
Cons ci ratio: 1.943197e-01	ci left: 3.529041e-02	ci right 4.298104e-02	k: 390	n:10000
KS ci ratio: 1.261899e-01	ci left: 8.242097e-02	ci right 9.362038e-02	k: 879	n:10000
GNAL   10000 perm   2 sec   (6327 perm/sec)   p_kst 8.790000e-02   p_cons 3.900000e-02   p_joint 3.527000e-01

Joint ci ratio: 1.569380e-01	ci left: 2.787170e-02	ci right 3.266616e-02	k: 604	n:20000
Cons ci ratio: 1.363231e-01	ci left: 3.698772e-02	ci right 4.244714e-02	k: 793	n:20000
KS ci ratio: 8.934291e-02	ci left: 8.386398e-02	ci right 9.175634e-02	k: 1755	n:20000
GNAL   20000 perm   4 sec   (5619 perm/sec)   p_kst 8.775000e-02   p_cons 3.965000e-02   p_joint 3.020000e-02

Joint ci ratio: 6.757064e-02	ci left: 9.744814e-02	ci right 1.042960e-01	k: 3025	n:30000
Cons ci ratio: 1.105850e-01	ci left: 3.797276e-02	ci right 4.245017e-02	k: 1205	n:30000
KS ci ratio: 7.233322e-02	ci left: 8.593227e-02	ci right 9.241422e-02	k: 2674	n:30000
GNAL   30000 perm   6 sec   (5362 perm/sec)   p_kst 8.913333e-02   p_cons 4.016667e-02   p_joint 1.008333e-01

Joint ci ratio: 5.902101e-02	ci left: 9.638588e-02	ci right 1.022724e-01	k: 3972	n:40000
Cons ci ratio: 9.649102e-02	ci left: 3.770985e-02	ci right 4.155735e-02	k: 1584	n:40000
KS ci ratio: 6.316576e-02	ci left: 8.504411e-02	ci right 9.061590e-02	k: 3512	n:40000
GNAL   40000 perm   8 sec   (5184 perm/sec)   p_kst 8.780000e-02   p_cons 3.960000e-02   p_joint 9.930000e-02

Outputting figure to mutsig2_images.part000000000072/GNAL.2_1574_40000_0.0878_0.0396_0.0993.png
                gene_name: GNAL
               theta_stop: 0.096 
                    nperm: 40000 
                     p_ks: 0.088 
        ci_ks_bounds_left: 0.085 
       ci_ks_bounds_right: 0.091 
                   p_cons: 0.040 
      ci_cons_bounds_left: 0.038 
     ci_cons_bounds_right: 0.042 
                  p_joint: 0.099 
     ci_joint_bounds_left: 0.096 
    ci_joint_bounds_right: 0.10 

Current progress: 40 percent done.
GNPAT
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.894111e-02	ci left: 1.899330e-01	ci right 2.056434e-01	k: 1977	n:10000
KS ci ratio: 1.379167e-02	ci left: 8.836011e-01	ci right 8.959708e-01	k: 8899	n:10000
GNPAT   10000 perm   2 sec   (6139 perm/sec)   p_kst 8.899000e-01   p_cons 1.977000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000072/GNPAT.2_2107_10000_0.8899_0.1977_1.png
                gene_name: GNPAT
               theta_stop: 0.079 
                    nperm: 10000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.20 
      ci_cons_bounds_left: 0.19 
     ci_cons_bounds_right: 0.21 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 60 percent done.
GOLGB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.498200e-01	ci left: 1.023265e-02	ci right 1.465817e-02	k: 123	n:10000
Cons ci ratio: 3.123971e-01	ci left: 1.307848e-02	ci right 1.800961e-02	k: 154	n:10000
KS ci ratio: 1.416829e-01	ci left: 6.604181e-02	ci right 7.620974e-02	k: 710	n:10000
GOLGB1   10000 perm   3 sec   (3735 perm/sec)   p_kst 7.100000e-02   p_cons 1.540000e-02   p_joint 1.230000e-02

Joint ci ratio: 2.123661e-01	ci left: 1.496956e-02	ci right 1.857290e-02	k: 334	n:20000
Cons ci ratio: 2.253759e-01	ci left: 1.321953e-02	ci right 1.662363e-02	k: 297	n:20000
KS ci ratio: 1.012254e-01	ci left: 6.620866e-02	ci right 7.331704e-02	k: 1394	n:20000
GOLGB1   20000 perm   6 sec   (3447 perm/sec)   p_kst 6.970000e-02   p_cons 1.485000e-02   p_joint 1.670000e-02

Joint ci ratio: 1.908535e-01	ci left: 1.254223e-02	ci right 1.521980e-02	k: 415	n:30000
Cons ci ratio: 1.959307e-01	ci left: 1.187572e-02	ci right 1.448649e-02	k: 394	n:30000
KS ci ratio: 8.300312e-02	ci left: 6.632057e-02	ci right 7.209653e-02	k: 2075	n:30000
GOLGB1   30000 perm   9 sec   (3340 perm/sec)   p_kst 6.916667e-02   p_cons 1.313333e-02   p_joint 1.383333e-02

Joint ci ratio: 1.571075e-01	ci left: 1.411992e-02	ci right 1.655118e-02	k: 612	n:40000
Cons ci ratio: 1.689786e-01	ci left: 1.215240e-02	ci right 1.441908e-02	k: 530	n:40000
KS ci ratio: 7.148159e-02	ci left: 6.742004e-02	ci right 7.244261e-02	k: 2796	n:40000
GOLGB1   40000 perm   12 sec   (3257 perm/sec)   p_kst 6.990000e-02   p_cons 1.325000e-02   p_joint 1.530000e-02

Joint ci ratio: 1.245047e-01	ci left: 1.822840e-02	ci right 2.066785e-02	k: 971	n:50000
Cons ci ratio: 1.500831e-01	ci left: 1.244901e-02	ci right 1.448805e-02	k: 672	n:50000
KS ci ratio: 6.402633e-02	ci left: 6.750275e-02	ci right 7.198736e-02	k: 3486	n:50000
GOLGB1   50000 perm   16 sec   (3211 perm/sec)   p_kst 6.972000e-02   p_cons 1.344000e-02   p_joint 1.942000e-02

Joint ci ratio: 1.252353e-01	ci left: 1.505959e-02	ci right 1.708761e-02	k: 963	n:60000
Cons ci ratio: 1.290285e-01	ci left: 1.417165e-02	ci right 1.614232e-02	k: 908	n:60000
KS ci ratio: 5.846588e-02	ci left: 6.765856e-02	ci right 7.174985e-02	k: 4181	n:60000
GOLGB1   60000 perm   19 sec   (3154 perm/sec)   p_kst 6.968333e-02   p_cons 1.513333e-02   p_joint 1.605000e-02

Joint ci ratio: 1.272688e-01	ci left: 1.251979e-02	ci right 1.423518e-02	k: 935	n:70000
Cons ci ratio: 1.204120e-01	ci left: 1.401551e-02	ci right 1.582502e-02	k: 1043	n:70000
KS ci ratio: 5.396860e-02	ci left: 6.819112e-02	ci right 7.198747e-02	k: 4905	n:70000
GOLGB1   70000 perm   22 sec   (3113 perm/sec)   p_kst 7.007143e-02   p_cons 1.490000e-02   p_joint 1.335714e-02

Joint ci ratio: 1.411409e-01	ci left: 8.875580e-03	ci right 1.023534e-02	k: 763	n:80000
Cons ci ratio: 1.135636e-01	ci left: 1.384097e-02	ci right 1.551949e-02	k: 1173	n:80000
KS ci ratio: 5.068189e-02	ci left: 6.780895e-02	ci right 7.134734e-02	k: 5565	n:80000
GOLGB1   80000 perm   26 sec   (3063 perm/sec)   p_kst 6.956250e-02   p_cons 1.466250e-02   p_joint 9.537500e-03

Joint ci ratio: 1.504255e-01	ci left: 6.925305e-03	ci right 8.062341e-03	k: 673	n:90000
Cons ci ratio: 1.064469e-01	ci left: 1.405367e-02	ci right 1.564449e-02	k: 1335	n:90000
KS ci ratio: 4.790167e-02	ci left: 6.759421e-02	ci right 7.092251e-02	k: 6232	n:90000
GOLGB1   90000 perm   30 sec   (3015 perm/sec)   p_kst 6.924444e-02   p_cons 1.483333e-02   p_joint 7.477778e-03

Joint ci ratio: 1.194203e-01	ci left: 1.002302e-02	ci right 1.130560e-02	k: 1065	n:100000
Cons ci ratio: 1.006561e-01	ci left: 1.418745e-02	ci right 1.570087e-02	k: 1493	n:100000
KS ci ratio: 4.550554e-02	ci left: 6.750588e-02	ci right 7.065917e-02	k: 6907	n:100000
GOLGB1   100000 perm   34 sec   (2981 perm/sec)   p_kst 6.907000e-02   p_cons 1.493000e-02   p_joint 1.065000e-02

Joint ci ratio: 1.092735e-01	ci left: 1.093136e-02	ci right 1.220368e-02	k: 1271	n:110000
Cons ci ratio: 9.577679e-02	ci left: 1.428107e-02	ci right 1.572648e-02	k: 1649	n:110000
KS ci ratio: 4.342407e-02	ci left: 6.747304e-02	ci right 7.047700e-02	k: 7586	n:110000
GOLGB1   110000 perm   37 sec   (2951 perm/sec)   p_kst 6.896364e-02   p_cons 1.499091e-02   p_joint 1.155455e-02

Joint ci ratio: 1.095010e-01	ci left: 9.987722e-03	ci right 1.115278e-02	k: 1267	n:120000
Cons ci ratio: 9.193294e-02	ci left: 1.423839e-02	ci right 1.561853e-02	k: 1790	n:120000
KS ci ratio: 4.153694e-02	ci left: 6.765477e-02	ci right 7.053277e-02	k: 8290	n:120000
GOLGB1   120000 perm   41 sec   (2925 perm/sec)   p_kst 6.908333e-02   p_cons 1.491667e-02   p_joint 1.055833e-02

Joint ci ratio: 1.053473e-01	ci left: 9.982971e-03	ci right 1.110056e-02	k: 1369	n:130000
Cons ci ratio: 8.851758e-02	ci left: 1.420326e-02	ci right 1.552620e-02	k: 1931	n:130000
KS ci ratio: 3.981207e-02	ci left: 6.801669e-02	ci right 7.078717e-02	k: 9021	n:130000
GOLGB1   130000 perm   45 sec   (2897 perm/sec)   p_kst 6.939231e-02   p_cons 1.485385e-02   p_joint 1.053077e-02

Joint ci ratio: 1.049244e-01	ci left: 9.353202e-03	ci right 1.039582e-02	k: 1381	n:140000
Cons ci ratio: 8.560341e-02	ci left: 1.412502e-02	ci right 1.539519e-02	k: 2065	n:140000
KS ci ratio: 3.837661e-02	ci left: 6.802459e-02	ci right 7.069327e-02	k: 9709	n:140000
GOLGB1   140000 perm   49 sec   (2867 perm/sec)   p_kst 6.935000e-02   p_cons 1.475000e-02   p_joint 9.864286e-03

Joint ci ratio: 9.850760e-02	ci left: 9.931779e-03	ci right 1.096728e-02	k: 1566	n:150000
Cons ci ratio: 8.273058e-02	ci left: 1.413620e-02	ci right 1.536266e-02	k: 2211	n:150000
KS ci ratio: 3.694305e-02	ci left: 6.852872e-02	ci right 7.111461e-02	k: 10472	n:150000
GOLGB1   150000 perm   53 sec   (2828 perm/sec)   p_kst 6.981333e-02   p_cons 1.474000e-02   p_joint 1.044000e-02

Outputting figure to mutsig2_images.part000000000072/GOLGB1.2_9864_150000_0.069813_0.01474_0.01044.png
                gene_name: GOLGB1
               theta_stop: 0.099 
                    nperm: 150000 
                     p_ks: 0.070 
        ci_ks_bounds_left: 0.069 
       ci_ks_bounds_right: 0.071 
                   p_cons: 0.015 
      ci_cons_bounds_left: 0.014 
     ci_cons_bounds_right: 0.015 
                  p_joint: 0.010 
     ci_joint_bounds_left: 0.0099 
    ci_joint_bounds_right: 0.011 

Current progress: 80 percent done.
GON4L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.703364e-02	ci left: 8.338874e-01	ci right 8.483133e-01	k: 8412	n:10000
Cons ci ratio: 2.351292e-02	ci left: 7.266365e-01	ci right 7.440262e-01	k: 7354	n:10000
KS ci ratio: 2.087337e-02	ci left: 7.708384e-01	ci right 7.871988e-01	k: 7791	n:10000
GON4L   10000 perm   2 sec   (4496 perm/sec)   p_kst 7.791000e-01   p_cons 7.354000e-01   p_joint 8.412000e-01

Outputting figure to mutsig2_images.part000000000072/GON4L.2_6964_10000_0.7791_0.7354_0.8412.png
                gene_name: GON4L
               theta_stop: 0.024 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.74 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.74 
                  p_joint: 0.84 
     ci_joint_bounds_left: 0.83 
    ci_joint_bounds_right: 0.85 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000072
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 72 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1707>
Subject: Job 8704219: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1707>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000073> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:35:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000073.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000073.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 73  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000073.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    180.46 sec.
    Max Memory :      5697 MB
    Max Swap   :      8378 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
73
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 73
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 73: processing genes 6514 - 6604
Calculating significance of each gene.
Using projection method.
6514	GPATCH2	1
6515	GPATCH3	1
6516	GPATCH4	1
6517	GPATCH8	1.865586e-01
6518	GPBP1	1
6519	GPBP1L1	1
6520	GPC1	1
6521	GPC2	1
6522	GPC3	1
6523	GPC4	1
6524	GPC5	1.661912e-01
6525	GPC6	5.296710e-02
6526	GPCPD1	1
6527	GPD1	1
6528	GPD1L	1
6529	GPD2	2.210188e-01
6530	GPER	1
6531	GPHA2	1
6532	GPHB5	1
6533	GPHN	1
6534	GPI	1
6535	GPIHBP1	1
6536	GPKOW	1.398304e-01
6537	GPLD1	1
6538	GPM6A	1
6539	GPM6B	8.169812e-02
6540	GPN1	1.453335e-01
6541	GPN2	1
6542	GPN3	1
6543	GPNMB	1
6544	GPR1	1
6545	GPR101	2.187191e-01
6546	GPR107	1
6547	GPR108	1
6548	GPR109A	1
6549	GPR109B	1
6550	GPR110	1
6551	GPR111	1
6552	GPR112	1
6553	GPR113	1.323619e-01
6554	GPR114	2.472033e-01
6555	GPR115	1
6556	GPR116	1
6557	GPR119	1.118395e-01
6558	GPR12	1
6559	GPR120	2.119009e-02
6560	GPR123	1.444423e-01
6561	GPR124	2.138348e-03
6562	GPR125	1
6563	GPR126	1
6564	GPR128	1
6565	GPR132	1
6566	GPR133	4.861108e-02
6567	GPR135	1
6568	GPR137	1
6569	GPR137B	1
6570	GPR137C	1
6571	GPR139	1
6572	GPR141	1.950133e-02
6573	GPR142	5.917689e-02
6574	GPR143	1
6575	GPR146	1
6576	GPR148	1
6577	GPR149	1
6578	GPR15	1
6579	GPR151	1.593485e-02
6580	GPR152	1
6581	GPR153	1
6582	GPR155	1
6583	GPR156	1
6584	GPR157	1
6585	GPR158	4.577669e-01
6586	GPR160	1
6587	GPR161	1
6588	GPR162	1
6589	GPR17	1
6590	GPR171	1
6591	GPR172A	7.506114e-03
6592	GPR172B	1
6593	GPR173	1
6594	GPR174	1
6595	GPR176	1
6596	GPR179	1.157343e-01
6597	GPR18	1
6598	GPR180	1
6599	GPR182	1
6600	GPR183	1
6601	GPR19	1
6602	GPR20	1
6603	GPR21	1
6604	GPR22	1
Done

Running MutSig 2:
Scatter job 73: processing genes 6514 - 6604
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
GPR124
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.942206e-02	ci left: 4.872524e-01	ci right 5.069493e-01	k: 4971	n:10000
Cons ci ratio: 3.757392e-02	ci left: 5.112540e-01	ci right 5.309337e-01	k: 5211	n:10000
KS ci ratio: 6.056996e-02	ci left: 2.861716e-01	ci right 3.041479e-01	k: 2951	n:10000
GPR124   10000 perm   2 sec   (4942 perm/sec)   p_kst 2.951000e-01   p_cons 5.211000e-01   p_joint 4.971000e-01

Outputting figure to mutsig2_images.part000000000073/GPR124.3_4072_10000_0.2951_0.5211_0.4971.png
                gene_name: GPR124
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.30 
        ci_ks_bounds_left: 0.29 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.52 
      ci_cons_bounds_left: 0.51 
     ci_cons_bounds_right: 0.53 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 20 percent done.
GPR133
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.735644e-02	ci left: 2.444035e-01	ci right 2.615407e-01	k: 2529	n:10000
Cons ci ratio: 3.152538e-02	ci left: 5.975480e-01	ci right 6.167896e-01	k: 6072	n:10000
KS ci ratio: 1.445485e-01	ci left: 6.352868e-02	ci right 7.352445e-02	k: 684	n:10000
GPR133   10000 perm   2 sec   (5723 perm/sec)   p_kst 6.840000e-02   p_cons 6.072000e-01   p_joint 2.529000e-01

Joint ci ratio: 5.667008e-02	ci left: 1.875504e-01	ci right 1.985390e-01	k: 3860	n:20000
Cons ci ratio: 2.325848e-02	ci left: 5.799385e-01	ci right 5.936363e-01	k: 11736	n:20000
KS ci ratio: 1.014994e-01	ci left: 6.586692e-02	ci right 7.295888e-02	k: 1387	n:20000
GPR133   20000 perm   4 sec   (5077 perm/sec)   p_kst 6.935000e-02   p_cons 5.868000e-01   p_joint 1.930000e-01

Joint ci ratio: 3.659439e-02	ci left: 2.715765e-01	ci right 2.817334e-01	k: 8299	n:30000
Cons ci ratio: 1.889050e-02	ci left: 5.837747e-01	ci right 5.949413e-01	k: 17681	n:30000
KS ci ratio: 8.226056e-02	ci left: 6.746482e-02	ci right 7.328538e-02	k: 2110	n:30000
GPR133   30000 perm   6 sec   (4775 perm/sec)   p_kst 7.033333e-02   p_cons 5.893667e-01   p_joint 2.766333e-01

Outputting figure to mutsig2_images.part000000000073/GPR133.2_2725_30000_0.070333_0.58937_0.27663.png
                gene_name: GPR133
               theta_stop: 0.082 
                    nperm: 30000 
                     p_ks: 0.070 
        ci_ks_bounds_left: 0.067 
       ci_ks_bounds_right: 0.073 
                   p_cons: 0.59 
      ci_cons_bounds_left: 0.58 
     ci_cons_bounds_right: 0.59 
                  p_joint: 0.28 
     ci_joint_bounds_left: 0.27 
    ci_joint_bounds_right: 0.28 

Current progress: 40 percent done.
GPR151
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.545165e-03	ci left: 9.944420e-01	ci right 9.970562e-01	k: 9959	n:10000
KS ci ratio: 1.124191e-01	ci left: 1.022739e-01	ci right 1.145552e-01	k: 1083	n:10000
GPR151   10000 perm   1 sec   (6706 perm/sec)   p_kst 1.083000e-01   p_cons 9.959000e-01   p_joint 1

Joint ci ratio: 1.913439e-02	ci left: 6.707201e-01	ci right 6.837283e-01	k: 13545	n:20000
Cons ci ratio: 1.789138e-03	ci left: 9.949133e-01	ci right 9.967379e-01	k: 19918	n:20000
KS ci ratio: 7.836327e-02	ci left: 1.068256e-01	ci right 1.155878e-01	k: 2223	n:20000
GPR151   20000 perm   3 sec   (5897 perm/sec)   p_kst 1.111500e-01   p_cons 9.959000e-01   p_joint 6.772500e-01

Outputting figure to mutsig2_images.part000000000073/GPR151.2_1264_20000_0.11115_0.9959_0.67725.png
                gene_name: GPR151
               theta_stop: 0.078 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.12 
                   p_cons: 1.00 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.68 
     ci_joint_bounds_left: 0.67 
    ci_joint_bounds_right: 0.68 

Current progress: 60 percent done.
GPR172A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.827232e-02	ci left: 5.020507e-01	ci right 5.217424e-01	k: 5119	n:10000
Cons ci ratio: 4.239677e-02	ci left: 4.509930e-01	ci right 4.706299e-01	k: 4608	n:10000
KS ci ratio: 5.274675e-02	ci left: 3.463103e-01	ci right 3.651738e-01	k: 3557	n:10000
GPR172A   10000 perm   2 sec   (6321 perm/sec)   p_kst 3.557000e-01   p_cons 4.608000e-01   p_joint 5.119000e-01

Outputting figure to mutsig2_images.part000000000073/GPR172A.2_1354_10000_0.3557_0.4608_0.5119.png
                gene_name: GPR172A
               theta_stop: 0.053 
                    nperm: 10000 
                     p_ks: 0.36 
        ci_ks_bounds_left: 0.35 
       ci_ks_bounds_right: 0.37 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 80 percent done.
GPR179
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.232190e-01	ci left: 8.621021e-02	ci right 9.762881e-02	k: 918	n:10000
Cons ci ratio: 1.290236e-01	ci left: 7.902317e-02	ci right 9.002028e-02	k: 844	n:10000
KS ci ratio: 3.286347e-02	ci left: 5.774761e-01	ci right 5.968731e-01	k: 5872	n:10000
GPR179   10000 perm   2 sec   (4368 perm/sec)   p_kst 5.872000e-01   p_cons 8.440000e-02   p_joint 9.180000e-02

Joint ci ratio: 4.863210e-02	ci left: 2.392006e-01	ci right 2.511736e-01	k: 4903	n:20000
Cons ci ratio: 8.580069e-02	ci left: 9.043103e-02	ci right 9.858730e-02	k: 1889	n:20000
KS ci ratio: 2.343155e-02	ci left: 5.763304e-01	ci right 5.900454e-01	k: 11664	n:20000
GPR179   20000 perm   5 sec   (3986 perm/sec)   p_kst 5.832000e-01   p_cons 9.445000e-02   p_joint 2.451500e-01

Outputting figure to mutsig2_images.part000000000073/GPR179.2_7148_20000_0.5832_0.09445_0.24515.png
                gene_name: GPR179
               theta_stop: 0.086 
                    nperm: 20000 
                     p_ks: 0.58 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.59 
                   p_cons: 0.094 
      ci_cons_bounds_left: 0.090 
     ci_cons_bounds_right: 0.099 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.25 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000073
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 73 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1705>
Subject: Job 8704220: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1705>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000074> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:35:50 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000074.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000074.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 74  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000074.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    170.69 sec.
    Max Memory :      5727 MB
    Max Swap   :      8475 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
74
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 74
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 74: processing genes 6605 - 6694
Calculating significance of each gene.
Using projection method.
6605	GPR25	1
6606	GPR26	1
6607	GPR27	1
6608	GPR3	1
6609	GPR31	1
6610	GPR32	1
6611	GPR34	1
6612	GPR35	9.719402e-02
6613	GPR37	1
6614	GPR37L1	1
6615	GPR39	1
6616	GPR4	1
6617	GPR45	1
6618	GPR50	1
6619	GPR52	1
6620	GPR55	1
6621	GPR56	1
6622	GPR6	1
6623	GPR61	1
6624	GPR62	1
6625	GPR63	1
6626	GPR64	1
6627	GPR65	1
6628	GPR68	1
6629	GPR75	1
6630	GPR77	1
6631	GPR78	8.080223e-02
6632	GPR81	1.008716e-01
6633	GPR82	1
6634	GPR83	1
6635	GPR84	1
6636	GPR85	1
6637	GPR87	6.998828e-02
6638	GPR88	1
6639	GPR89A	1
6640	GPR89B	1
6641	GPR97	1
6642	GPR98	6.849542e-02
6643	GPRASP1	4.517827e-01
6644	GPRASP2	1
6645	GPRC5A	1
6646	GPRC5B	1
6647	GPRC5C	1
6648	GPRC5D	1
6649	GPRC6A	1
6650	GPRIN1	1
6651	GPRIN2	1.328843e-02
6652	GPRIN3	1.741935e-01
6653	GPS1	2.313611e-01
6654	GPS2	1
6655	GPSM1	1
6656	GPSM2	1
6657	GPSM3	1
6658	GPT	1
6659	GPT2	1
6660	GPX1	1
6661	GPX2	4.859693e-02
6662	GPX3	1
6663	GPX4	1
6664	GPX5	1
6665	GPX6	1
6666	GPX7	1
6667	GPX8	3.838747e-02
6668	GRAMD1A	2.041969e-01
6669	GRAMD1B	1
6670	GRAMD1C	1
6671	GRAMD2	7.544110e-02
6672	GRAMD3	1
6673	GRAMD4	1
6674	GRAP	1
6675	GRAP2	1
6676	GRASP	1
6677	GRB10	5.315134e-02
6678	GRB14	1
6679	GRB2	1
6680	GRB7	2.454928e-01
6681	GREB1	1
6682	GREM1	1
6683	GREM2	1
6684	GRHL1	1
6685	GRHL2	1
6686	GRHL3	1
6687	GRHPR	1
6688	GRIA1	1.901171e-01
6689	GRIA2	5.596856e-02
6690	GRIA3	1
6691	GRIA4	2.014036e-01
6692	GRID1	1.645230e-01
6693	GRID2	1
6694	GRIK1	7.025322e-02
Done

Running MutSig 2:
Scatter job 74: processing genes 6605 - 6694
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
GPR98
Processing conservation and coverage...
51% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.913932e-02	ci left: 3.792292e-01	ci right 3.984357e-01	k: 3888	n:10000
Cons ci ratio: 8.203014e-02	ci left: 1.782191e-01	ci right 1.935643e-01	k: 1858	n:10000
KS ci ratio: 3.671727e-02	ci left: 5.227627e-01	ci right 5.424183e-01	k: 5326	n:10000
GPR98   10000 perm   4 sec   (2470 perm/sec)   p_kst 5.326000e-01   p_cons 1.858000e-01   p_joint 3.888000e-01

Outputting figure to mutsig2_images.part000000000074/GPR98.5_19281_10000_0.5326_0.1858_0.3888.png
                gene_name: GPR98
               theta_stop: 0.082 
                    nperm: 10000 
                     p_ks: 0.53 
        ci_ks_bounds_left: 0.52 
       ci_ks_bounds_right: 0.54 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.39 
     ci_joint_bounds_left: 0.38 
    ci_joint_bounds_right: 0.40 

Current progress: 25 percent done.
GPRIN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.836740e-03	ci left: 9.753575e-01	ci right 9.811593e-01	k: 9784	n:10000
Cons ci ratio: 1.163479e-02	ci left: 9.135826e-01	ci right 9.243718e-01	k: 9191	n:10000
KS ci ratio: 3.048442e-02	ci left: 6.135171e-01	ci right 6.326112e-01	k: 6231	n:10000
GPRIN2   10000 perm   2 sec   (6630 perm/sec)   p_kst 6.231000e-01   p_cons 9.191000e-01   p_joint 9.784000e-01

Outputting figure to mutsig2_images.part000000000074/GPRIN2.2_1381_10000_0.6231_0.9191_0.9784.png
                gene_name: GPRIN2
               theta_stop: 0.030 
                    nperm: 10000 
                     p_ks: 0.62 
        ci_ks_bounds_left: 0.61 
       ci_ks_bounds_right: 0.63 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.92 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.98 

Current progress: 50 percent done.
GRIA2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.486017e-02	ci left: 3.286278e-01	ci right 3.472667e-01	k: 3379	n:10000
Cons ci ratio: 1.116726e-02	ci left: 9.196628e-01	ci right 9.300880e-01	k: 9250	n:10000
KS ci ratio: 1.330186e-01	ci left: 7.456177e-02	ci right 8.528446e-02	k: 798	n:10000
GRIA2   10000 perm   2 sec   (6005 perm/sec)   p_kst 7.980000e-02   p_cons 9.250000e-01   p_joint 3.379000e-01

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 7.894620e-03	ci left: 9.212625e-01	ci right 9.286134e-01	k: 18500	n:20000
KS ci ratio: 9.249649e-02	ci left: 7.857610e-02	ci right 8.624582e-02	k: 1647	n:20000
GRIA2   20000 perm   4 sec   (5383 perm/sec)   p_kst 8.235000e-02   p_cons 9.250000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000074/GRIA2.2_2831_20000_0.08235_0.925_1.png
                gene_name: GRIA2
               theta_stop: 0.092 
                    nperm: 20000 
                     p_ks: 0.082 
        ci_ks_bounds_left: 0.079 
       ci_ks_bounds_right: 0.086 
                   p_cons: 0.93 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.93 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
GRIK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.730052e-02	ci left: 8.296127e-01	ci right 8.441905e-01	k: 8370	n:10000
Cons ci ratio: 4.863654e-02	ci left: 3.841063e-01	ci right 4.033556e-01	k: 3937	n:10000
KS ci ratio: 5.144913e-02	ci left: 3.577420e-01	ci right 3.767354e-01	k: 3672	n:10000
GRIK1   10000 perm   2 sec   (5762 perm/sec)   p_kst 3.672000e-01   p_cons 3.937000e-01   p_joint 8.370000e-01

Outputting figure to mutsig2_images.part000000000074/GRIK1.2_2985_10000_0.3672_0.3937_0.837.png
                gene_name: GRIK1
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.39 
      ci_cons_bounds_left: 0.38 
     ci_cons_bounds_right: 0.40 
                  p_joint: 0.84 
     ci_joint_bounds_left: 0.83 
    ci_joint_bounds_right: 0.84 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000074
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 74 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1542>
Subject: Job 8704222: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1542>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000075> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:36:56 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000075.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000075.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 75  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000075.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    266.37 sec.
    Max Memory :      5778 MB
    Max Swap   :      8513 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
75
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 75
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 75: processing genes 6695 - 6785
Calculating significance of each gene.
Using projection method.
6695	GRIK2	1.964765e-01
6696	GRIK3	3.606381e-01
6697	GRIK4	1
6698	GRIK5	1
6699	GRIN1	1
6700	GRIN2A	3.729522e-01
6701	GRIN2B	1.915421e-01
6702	GRIN2C	1
6703	GRIN2D	7.249674e-03
6704	GRIN3A	1
6705	GRIN3B	1
6706	GRINA	1.563324e-01
6707	GRINL1A	1
6708	GRIP1	1
6709	GRIP2	1.543697e-01
6710	GRIPAP1	1
6711	GRK1	1
6712	GRK4	1
6713	GRK5	1
6714	GRK6	1
6715	GRK7	1
6716	GRLF1	1
6717	GRM1	6.137279e-03
In gene GRM2 the following bins exceed PROBCAP:
    THCA-ET-A3DT-TP	categ 5	N = 2631    n = 1	mu =   6.89e-08
6718	GRM2	1.265795e-01
6719	GRM3	1
6720	GRM4	3.471888e-02
6721	GRM5	1
6722	GRM6	1.137118e-02
6723	GRM7	1
6724	GRM8	1
6725	GRN	1
6726	GRP	1
6727	GRPEL1	1
6728	GRPEL2	1
6729	GRPR	1
6730	GRSF1	1
6731	GRTP1	1
6732	GRWD1	1
In gene GRXCR1 the following bins exceed PROBCAP:
    THCA-EM-A22M-TP	categ 6	N = 889     n = 1	mu =   1.03e-07
6733	GRXCR1	9.109003e-04
6734	GRXCR2	1
6735	GSC	1
6736	GSDMA	1
6737	GSDMB	1
6738	GSDMC	1
6739	GSDMD	1
6740	GSG1	1
6741	GSG1L	1
6742	GSG2	1
6743	GSK3A	1
6744	GSK3B	1
6745	GSN	1
6746	GSPT1	1
6747	GSPT2	1
6748	GSR	1
6749	GSS	1
6750	GSTA1	1
6751	GSTA2	7.747360e-02
6752	GSTA3	1
6753	GSTA4	1
6754	GSTA5	1
6755	GSTCD	1
6756	GSTK1	1
6757	GSTM1	1
6758	GSTM2	1
6759	GSTM3	5.383643e-02
6760	GSTM4	1
6761	GSTM5	1
6762	GSTO1	1
6763	GSTO2	1
6764	GSTP1	1
6765	GSTT1	1
6766	GSTZ1	1
6767	GSX1	1
6768	GSX2	1
6769	GTDC1	7.401310e-02
6770	GTF2A1	1
6771	GTF2A1L	1
6772	GTF2A2	1
6773	GTF2B	1
6774	GTF2E1	1
6775	GTF2E2	1
6776	GTF2F1	1
6777	GTF2F2	1.572045e-02
6778	GTF2H1	1
6779	GTF2H2C	1
6780	GTF2H2D	1
6781	GTF2H3	1
6782	GTF2H4	1
6783	GTF2H5	1
6784	GTF2I	1
6785	GTF2IRD1	3.567505e-01
Done

Running MutSig 2:
Scatter job 75: processing genes 6695 - 6785
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
GRIN2D
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.622758e-02	ci left: 4.085072e-01	ci right 4.279405e-01	k: 4182	n:10000
Cons ci ratio: 8.732659e-02	ci left: 1.603269e-01	ci right 1.750672e-01	k: 1676	n:10000
KS ci ratio: 2.045457e-02	ci left: 7.778289e-01	ci right 7.940042e-01	k: 7860	n:10000
GRIN2D   10000 perm   2 sec   (4334 perm/sec)   p_kst 7.860000e-01   p_cons 1.676000e-01   p_joint 4.182000e-01

Outputting figure to mutsig2_images.part000000000075/GRIN2D.3_4059_10000_0.786_0.1676_0.4182.png
                gene_name: GRIN2D
               theta_stop: 0.087 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.42 
     ci_joint_bounds_left: 0.41 
    ci_joint_bounds_right: 0.43 

Current progress: 17 percent done.
GRM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.803054e-02	ci left: 8.178151e-01	ci right 8.327949e-01	k: 8254	n:10000
KS ci ratio: 1.804305e-02	ci left: 8.176118e-01	ci right 8.325984e-01	k: 8252	n:10000
GRM1   10000 perm   2 sec   (4659 perm/sec)   p_kst 8.252000e-01   p_cons 8.254000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000075/GRM1.3_3682_10000_0.8252_0.8254_1.png
                gene_name: GRM1
               theta_stop: 0.018 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.83 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
GRIN2B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.799302e-02	ci left: 8.184250e-01	ci right 8.333847e-01	k: 8260	n:10000
KS ci ratio: 7.426411e-02	ci left: 2.097433e-01	ci right 2.260214e-01	k: 2178	n:10000
GRIN2B   10000 perm   2 sec   (4937 perm/sec)   p_kst 2.178000e-01   p_cons 8.260000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000075/GRIN2B.2_4503_10000_0.2178_0.826_1.png
                gene_name: GRIN2B
               theta_stop: 0.074 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.83 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
GRM4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.494741e-02	ci left: 8.664173e-01	ci right 8.795646e-01	k: 8731	n:10000
Cons ci ratio: 1.153651e-01	ci left: 9.749841e-02	ci right 1.095337e-01	k: 1034	n:10000
KS ci ratio: 2.460214e-02	ci left: 7.084626e-01	ci right 7.262107e-01	k: 7174	n:10000
GRM4   10000 perm   2 sec   (5749 perm/sec)   p_kst 7.174000e-01   p_cons 1.034000e-01   p_joint 8.731000e-01

Joint ci ratio: 1.045609e-02	ci left: 8.707940e-01	ci right 8.799966e-01	k: 17509	n:20000
Cons ci ratio: 8.070988e-02	ci left: 1.012260e-01	ci right 1.097891e-01	k: 2109	n:20000
KS ci ratio: 1.726808e-02	ci left: 7.141233e-01	ci right 7.266126e-01	k: 14408	n:20000
GRM4   20000 perm   4 sec   (4985 perm/sec)   p_kst 7.204000e-01   p_cons 1.054500e-01   p_joint 8.754500e-01

Outputting figure to mutsig2_images.part000000000075/GRM4.2_2779_20000_0.7204_0.10545_0.87545.png
                gene_name: GRM4
               theta_stop: 0.081 
                    nperm: 20000 
                     p_ks: 0.72 
        ci_ks_bounds_left: 0.71 
       ci_ks_bounds_right: 0.73 
                   p_cons: 0.11 
      ci_cons_bounds_left: 0.10 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.88 
     ci_joint_bounds_left: 0.87 
    ci_joint_bounds_right: 0.88 

Current progress: 67 percent done.
GRM6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.273467e-02	ci left: 2.719080e-01	ci right 2.896199e-01	k: 2807	n:10000
Cons ci ratio: 7.476885e-02	ci left: 2.074750e-01	ci right 2.236910e-01	k: 2155	n:10000
KS ci ratio: 1.409920e-02	ci left: 8.790966e-01	ci right 8.916780e-01	k: 8855	n:10000
GRM6   10000 perm   2 sec   (5600 perm/sec)   p_kst 8.855000e-01   p_cons 2.155000e-01   p_joint 2.807000e-01

Outputting figure to mutsig2_images.part000000000075/GRM6.2_2674_10000_0.8855_0.2155_0.2807.png
                gene_name: GRM6
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.89 
                   p_cons: 0.22 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.28 
     ci_joint_bounds_left: 0.27 
    ci_joint_bounds_right: 0.29 

Current progress: 83 percent done.
GRXCR1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.755301e-02	ci left: 2.433161e-01	ci right 2.604287e-01	k: 2518	n:10000
KS ci ratio: 4.325118e-02	ci left: 4.411130e-01	ci right 4.607156e-01	k: 4509	n:10000
GRXCR1   10000 perm   2 sec   (6607 perm/sec)   p_kst 4.509000e-01   p_cons 2.518000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000075/GRXCR1.2_889_10000_0.4509_0.2518_1.png
                gene_name: GRXCR1
               theta_stop: 0.068 
                    nperm: 10000 
                     p_ks: 0.45 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.46 
                   p_cons: 0.25 
      ci_cons_bounds_left: 0.24 
     ci_cons_bounds_right: 0.26 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000075
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 75 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1699>
Subject: Job 8704225: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1699>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000076> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:35:22 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000076.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000076.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 76  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000076.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    145.47 sec.
    Max Memory :      5608 MB
    Max Swap   :      8383 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
76
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 76
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 76: processing genes 6786 - 6875
Calculating significance of each gene.
Using projection method.
6786	GTF2IRD2	1
6787	GTF2IRD2B	1
6788	GTF3A	1
6789	GTF3C1	1
6790	GTF3C2	1
6791	GTF3C3	1
6792	GTF3C4	1
6793	GTF3C5	1.842684e-01
6794	GTF3C6	1
6795	GTPBP1	2.533923e-01
6796	GTPBP10	1
6797	GTPBP2	1
6798	GTPBP3	1
6799	GTPBP4	8.978157e-02
6800	GTPBP5	1
6801	GTPBP8	1
6802	GTSE1	1
6803	GTSF1	1
6804	GTSF1L	1
6805	GUCA1A	1
6806	GUCA1B	1
6807	GUCA1C	1
6808	GUCA2A	1
6809	GUCA2B	4.421066e-02
6810	GUCY1A2	1
6811	GUCY1A3	1
6812	GUCY1B3	1
6813	GUCY2C	1
6814	GUCY2D	1
6815	GUCY2F	1
6816	GUF1	1
6817	GUK1	1.069953e-01
6818	GULP1	1.171013e-01
6819	GUSB	1
6820	GXYLT1	1
6821	GXYLT2	1
6822	GYG1	1
6823	GYG2	1
6824	GYLTL1B	1
6825	GYPA	1
6826	GYPB	1
6827	GYPC	1
6828	GYPE	1
6829	GYS1	1
6830	GYS2	1
6831	GZF1	1
6832	GZMA	1
6833	GZMB	1
6834	GZMH	1
6835	GZMK	1
6836	GZMM	5.555853e-02
6837	H1F0	1
6838	H1FNT	1
6839	H1FOO	1
6840	H1FX	1
6841	H2AFJ	1
6842	H2AFV	1
6843	H2AFX	1
6844	H2AFY	1
6845	H2AFY2	1
6846	H2AFZ	1
6847	H2BFWT	1
6848	H3F3A	1
6849	H3F3B	1
6850	H3F3C	1
6851	H6PD	1
In gene HAAO the following bins exceed PROBCAP:
    THCA-ET-A2MZ-TP	categ 5	N = 631     n = 1	mu =   1.04e-07
6852	HAAO	3.109683e-02
6853	HABP2	1
6854	HABP4	1
6855	HACE1	1
6856	HACL1	4.807947e-02
6857	HADH	1
6858	HADHA	2.066051e-01
6859	HADHB	1
6860	HAGH	1
In gene HAGHL the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 519     n = 1	mu =   1.33e-07
6861	HAGHL	3.348035e-02
6862	HAL	1
6863	HAMP	1
6864	HAND1	1
6865	HAND2	1
6866	HAO1	1
6867	HAO2	1
6868	HAP1	2.094146e-01
6869	HAPLN1	1.205427e-01
6870	HAPLN2	1
6871	HAPLN3	1
6872	HAPLN4	1
6873	HARBI1	1
6874	HARS	1
6875	HARS2	1
Done

Running MutSig 2:
Scatter job 76: processing genes 6786 - 6875
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000076
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 76 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1647>
Subject: Job 8704227: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1647>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000077> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 20:05:59 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000077.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000077.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 77  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000077.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   2028.86 sec.
    Max Memory :      5865 MB
    Max Swap   :      8428 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
77
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 77
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 77: processing genes 6876 - 6966
Calculating significance of each gene.
Using projection method.
6876	HAS1	5.958433e-03
6877	HAS2	1
6878	HAS3	6.313540e-02
6879	HAT1	1
6880	HAUS1	1
6881	HAUS2	1
6882	HAUS3	1.009756e-01
6883	HAUS4	1
6884	HAUS5	1
6885	HAUS6	1.337232e-01
6886	HAUS7	1.542339e-02
6887	HAUS8	1.833534e-02
6888	HAVCR1	1
6889	HAVCR2	1
6890	HAX1	1
6891	HBA1	1
6892	HBA2	1
6893	HBB	1
6894	HBD	1
6895	HBE1	1
6896	HBEGF	1
6897	HBG1	1
6898	HBG2	1
6899	HBM	1
6900	HBP1	1
6901	HBQ1	1
6902	HBS1L	3.219376e-02
6903	HBXIP	4.573633e-02
6904	HCCS	8.150267e-02
6905	HCFC1	1
6906	HCFC1R1	1
6907	HCFC2	1
6908	HCK	1
6909	HCLS1	8.380331e-02
6910	HCN1	2.773852e-01
6911	HCN2	1
6912	HCN3	1
6913	HCN4	1
6914	HCP5	1
6915	HCRT	1
In gene HCRTR1 the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 1306    n = 1	mu =   2.35e-07
6916	HCRTR1	1.593041e-01
6917	HCRTR2	1
6918	HCST	1
6919	HDAC1	1
6920	HDAC10	1
6921	HDAC11	1
In gene HDAC2 the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 1466    n = 1	mu =   1.02e-07
6922	HDAC2	6.621830e-03
6923	HDAC3	1
6924	HDAC4	1
6925	HDAC5	4.100860e-01
6926	HDAC6	1
6927	HDAC7	1
6928	HDAC8	1.434404e-01
6929	HDAC9	1
6930	HDC	1
6931	HDDC2	1
6932	HDDC3	1
6933	HDGF	1
6934	HDGFL1	1
6935	HDGFRP2	1.884944e-01
6936	HDGFRP3	1
6937	HDHD1A	1
6938	HDHD2	1
6939	HDHD3	1
6940	HDLBP	3.746701e-01
6941	HDX	1
In gene HEATR1 the following bins exceed PROBCAP:
    THCA-DJ-A2PV-TP	categ 6	N = 6575    n = 1	mu =   3.49e-08
6942	HEATR1	3.127129e-02
6943	HEATR2	1
6944	HEATR3	1
6945	HEATR4	1
6946	HEATR5A	3.450394e-01
6947	HEATR5B	1
6948	HEATR6	3.821892e-01
6949	HEATR7B2	1
6950	HEBP1	1
6951	HEBP2	1
6952	HECA	1
6953	HECTD1	1
6954	HECTD2	1
6955	HECTD3	1
6956	HECW1	1
6957	HECW2	1
6958	HEG1	1
6959	HELB	1
6960	HELLS	2.286340e-01
6961	HELQ	1
6962	HELT	1
In gene HELZ the following bins exceed PROBCAP:
    THCA-EL-A3CY-TP	categ 5	N = 5947    n = 1	mu =   3.48e-08
6963	HELZ	2.627117e-01
6964	HEMGN	1
6965	HEMK1	1
6966	HEPACAM	1
Done

Running MutSig 2:
Scatter job 77: processing genes 6876 - 6966
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
HEATR1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.330186e-01	ci left: 7.456177e-02	ci right 8.528446e-02	k: 798	n:10000
Cons ci ratio: 9.114155e-02	ci left: 1.489391e-01	ci right 1.632618e-01	k: 1560	n:10000
KS ci ratio: 1.001251e-01	ci left: 1.262063e-01	ci right 1.396083e-01	k: 1328	n:10000
HEATR1   10000 perm   3 sec   (3672 perm/sec)   p_kst 1.328000e-01   p_cons 1.560000e-01   p_joint 7.980000e-02

Joint ci ratio: 9.255771e-02	ci left: 7.847822e-02	ci right 8.614373e-02	k: 1645	n:20000
Cons ci ratio: 6.122452e-02	ci left: 1.648667e-01	ci right 1.753294e-01	k: 3401	n:20000
KS ci ratio: 7.081575e-02	ci left: 1.281254e-01	ci right 1.375816e-01	k: 2656	n:20000
HEATR1   20000 perm   10 sec   (2081 perm/sec)   p_kst 1.328000e-01   p_cons 1.700500e-01   p_joint 8.225000e-02

Outputting figure to mutsig2_images.part000000000077/HEATR1.3_6611_20000_0.1328_0.17005_0.08225.png
                gene_name: HEATR1
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.13 
       ci_ks_bounds_right: 0.14 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.082 
     ci_joint_bounds_left: 0.078 
    ci_joint_bounds_right: 0.086 

Current progress: 20 percent done.
HAS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.831215e-02	ci left: 3.872920e-01	ci right 4.065681e-01	k: 3969	n:10000
Cons ci ratio: 9.507050e-02	ci left: 1.383491e-01	ci right 1.522583e-01	k: 1452	n:10000
KS ci ratio: 6.320387e-02	ci left: 2.689378e-01	ci right 2.865919e-01	k: 2777	n:10000
HAS1   10000 perm   2 sec   (6389 perm/sec)   p_kst 2.777000e-01   p_cons 1.452000e-01   p_joint 3.969000e-01

Outputting figure to mutsig2_images.part000000000077/HAS1.2_1757_10000_0.2777_0.1452_0.3969.png
                gene_name: HAS1
               theta_stop: 0.095 
                    nperm: 10000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.27 
       ci_ks_bounds_right: 0.29 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.15 
                  p_joint: 0.40 
     ci_joint_bounds_left: 0.39 
    ci_joint_bounds_right: 0.41 

Current progress: 40 percent done.
HAUS8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.829804e-01	ci left: 1.538312e-03	ci right 3.568919e-03	k: 24	n:10000
Cons ci ratio: 2.167809e-02	ci left: 7.573729e-01	ci right 7.740721e-01	k: 7658	n:10000
KS ci ratio: 1.752551e+00	ci left: 1.089969e-04	ci right 1.023839e-03	k: 4	n:10000
HAUS8   10000 perm   1 sec   (6762 perm/sec)   p_kst 4.000000e-04   p_cons 7.658000e-01   p_joint 2.400000e-03

Joint ci ratio: 4.676974e-01	ci left: 2.685268e-03	ci right 4.364195e-03	k: 69	n:20000
Cons ci ratio: 1.539923e-02	ci left: 7.582033e-01	ci right 7.700198e-01	k: 15283	n:20000
KS ci ratio: 1.181570e+00	ci left: 2.397946e-04	ci right 9.193249e-04	k: 10	n:20000
HAUS8   20000 perm   3 sec   (5947 perm/sec)   p_kst 5.000000e-04   p_cons 7.641500e-01   p_joint 3.450000e-03

Joint ci ratio: 3.782780e-01	ci left: 2.893683e-03	ci right 4.271882e-03	k: 106	n:30000
Cons ci ratio: 1.256122e-02	ci left: 7.596564e-01	ci right 7.692923e-01	k: 22935	n:30000
KS ci ratio: 8.762318e-01	ci left: 3.813497e-04	ci right 9.888526e-04	k: 19	n:30000
HAUS8   30000 perm   5 sec   (5608 perm/sec)   p_kst 6.333333e-04   p_cons 7.645000e-01   p_joint 3.533333e-03

Joint ci ratio: 4.017006e-01	ci left: 1.899444e-03	ci right 2.875048e-03	k: 94	n:40000
Cons ci ratio: 1.137259e-02	ci left: 7.438406e-01	ci right 7.523734e-01	k: 29925	n:40000
KS ci ratio: 7.405418e-01	ci left: 4.448749e-04	ci right 9.819388e-04	k: 27	n:40000
HAUS8   40000 perm   7 sec   (5447 perm/sec)   p_kst 6.750000e-04   p_cons 7.481250e-01   p_joint 2.350000e-03

Joint ci ratio: 3.433561e-01	ci left: 2.154454e-03	ci right 3.064827e-03	k: 129	n:50000
Cons ci ratio: 1.020017e-02	ci left: 7.432456e-01	ci right 7.508857e-01	k: 37354	n:50000
KS ci ratio: 6.356599e-01	ci left: 5.210801e-04	ci right 1.019850e-03	k: 37	n:50000
HAUS8   50000 perm   9 sec   (5304 perm/sec)   p_kst 7.400000e-04   p_cons 7.470800e-01   p_joint 2.580000e-03

Joint ci ratio: 2.767212e-01	ci left: 2.872454e-03	ci right 3.809937e-03	k: 199	n:60000
Cons ci ratio: 9.293705e-03	ci left: 7.443049e-01	ci right 7.512711e-01	k: 44868	n:60000
KS ci ratio: 5.541361e-01	ci left: 6.042337e-04	ci right 1.079535e-03	k: 49	n:60000
HAUS8   60000 perm   12 sec   (5178 perm/sec)   p_kst 8.166667e-04   p_cons 7.478000e-01   p_joint 3.316667e-03

Joint ci ratio: 2.541981e-01	ci left: 2.955574e-03	ci right 3.829249e-03	k: 236	n:70000
Cons ci ratio: 8.618641e-03	ci left: 7.439343e-01	ci right 7.503880e-01	k: 52302	n:70000
KS ci ratio: 5.190015e-01	ci left: 6.043662e-04	ci right 1.038742e-03	k: 56	n:70000
HAUS8   70000 perm   14 sec   (5062 perm/sec)   p_kst 8.000000e-04   p_cons 7.471714e-01   p_joint 3.371429e-03

Joint ci ratio: 2.381592e-01	ci left: 2.973206e-03	ci right 3.788465e-03	k: 269	n:80000
Cons ci ratio: 8.070196e-03	ci left: 7.437590e-01	ci right 7.497981e-01	k: 59743	n:80000
KS ci ratio: 4.898009e-01	ci left: 6.051880e-04	ci right 1.007444e-03	k: 63	n:80000
HAUS8   80000 perm   16 sec   (4962 perm/sec)   p_kst 7.875000e-04   p_cons 7.467875e-01   p_joint 3.362500e-03

Joint ci ratio: 2.294214e-01	ci left: 2.862500e-03	ci right 3.614526e-03	k: 290	n:90000
Cons ci ratio: 7.605498e-03	ci left: 7.440906e-01	ci right 7.497824e-01	k: 67225	n:90000
KS ci ratio: 4.586126e-01	ci left: 6.260017e-04	ci right 1.007363e-03	k: 72	n:90000
HAUS8   90000 perm   18 sec   (4865 perm/sec)   p_kst 8.000000e-04   p_cons 7.469444e-01   p_joint 3.222222e-03

Joint ci ratio: 2.271223e-01	ci left: 2.632783e-03	ci right 3.316551e-03	k: 296	n:100000
Cons ci ratio: 7.213959e-03	ci left: 7.443035e-01	ci right 7.497022e-01	k: 74701	n:100000
KS ci ratio: 4.408580e-01	ci left: 6.166049e-04	ci right 9.733811e-04	k: 78	n:100000
HAUS8   100000 perm   21 sec   (4766 perm/sec)   p_kst 7.800000e-04   p_cons 7.470100e-01   p_joint 2.960000e-03

Joint ci ratio: 2.256347e-01	ci left: 2.427710e-03	ci right 3.053511e-03	k: 300	n:110000
Cons ci ratio: 6.879251e-03	ci left: 7.443743e-01	ci right 7.495218e-01	k: 82165	n:110000
KS ci ratio: 4.250175e-01	ci left: 6.091506e-04	ci right 9.453478e-04	k: 84	n:110000
HAUS8   110000 perm   24 sec   (4673 perm/sec)   p_kst 7.636364e-04   p_cons 7.469545e-01   p_joint 2.727273e-03

Joint ci ratio: 1.961649e-01	ci left: 2.991326e-03	ci right 3.649705e-03	k: 397	n:120000
Cons ci ratio: 6.587042e-03	ci left: 7.444466e-01	ci right 7.493748e-01	k: 89630	n:120000
KS ci ratio: 4.107701e-01	ci left: 6.031304e-04	ci right 9.217981e-04	k: 90	n:120000
HAUS8   120000 perm   26 sec   (4589 perm/sec)   p_kst 7.500000e-04   p_cons 7.469167e-01   p_joint 3.308333e-03

Joint ci ratio: 1.984535e-01	ci left: 2.695372e-03	ci right 3.296368e-03	k: 388	n:130000
Cons ci ratio: 6.320922e-03	ci left: 7.450056e-01	ci right 7.497372e-01	k: 97159	n:130000
KS ci ratio: 3.978657e-01	ci left: 5.981959e-04	ci right 9.017143e-04	k: 96	n:130000
HAUS8   130000 perm   29 sec   (4506 perm/sec)   p_kst 7.384615e-04   p_cons 7.473769e-01   p_joint 2.984615e-03

Joint ci ratio: 1.914463e-01	ci left: 2.699880e-03	ci right 3.278152e-03	k: 417	n:140000
Cons ci ratio: 6.094769e-03	ci left: 7.448574e-01	ci right 7.494181e-01	k: 104600	n:140000
KS ci ratio: 3.842435e-01	ci left: 6.005523e-04	ci right 8.921977e-04	k: 103	n:140000
HAUS8   140000 perm   32 sec   (4410 perm/sec)   p_kst 7.357143e-04   p_cons 7.471429e-01   p_joint 2.978571e-03

Joint ci ratio: 1.959836e-01	ci left: 2.399327e-03	ci right 2.926856e-03	k: 398	n:150000
Cons ci ratio: 5.886801e-03	ci left: 7.450192e-01	ci right 7.494246e-01	k: 112084	n:150000
KS ci ratio: 3.702656e-01	ci left: 6.087934e-04	ci right 8.910835e-04	k: 111	n:150000
HAUS8   150000 perm   35 sec   (4312 perm/sec)   p_kst 7.400000e-04   p_cons 7.472267e-01   p_joint 2.653333e-03

Joint ci ratio: 1.964943e-01	ci left: 2.237464e-03	ci right 2.730840e-03	k: 396	n:160000
Cons ci ratio: 5.704328e-03	ci left: 7.447933e-01	ci right 7.490602e-01	k: 119509	n:160000
KS ci ratio: 3.547637e-01	ci left: 6.275546e-04	ci right 9.035557e-04	k: 121	n:160000
HAUS8   160000 perm   38 sec   (4222 perm/sec)   p_kst 7.562500e-04   p_cons 7.469313e-01   p_joint 2.475000e-03

Joint ci ratio: 1.914970e-01	ci left: 2.223377e-03	ci right 2.699726e-03	k: 417	n:170000
Cons ci ratio: 5.535330e-03	ci left: 7.447671e-01	ci right 7.489069e-01	k: 126963	n:170000
KS ci ratio: 3.450048e-01	ci left: 6.281981e-04	ci right 8.951858e-04	k: 128	n:170000
HAUS8   170000 perm   41 sec   (4154 perm/sec)   p_kst 7.529412e-04   p_cons 7.468412e-01   p_joint 2.452941e-03

Joint ci ratio: 1.843537e-01	ci left: 2.274573e-03	ci right 2.741680e-03	k: 450	n:180000
Cons ci ratio: 5.377905e-03	ci left: 7.449292e-01	ci right 7.489517e-01	k: 134450	n:180000
KS ci ratio: 3.288284e-01	ci left: 6.594160e-04	ci right 9.237569e-04	k: 141	n:180000
HAUS8   180000 perm   44 sec   (4071 perm/sec)   p_kst 7.833333e-04   p_cons 7.469444e-01   p_joint 2.500000e-03

Joint ci ratio: 1.794472e-01	ci left: 2.280447e-03	ci right 2.734944e-03	k: 475	n:190000
Cons ci ratio: 5.229691e-03	ci left: 7.453291e-01	ci right 7.492423e-01	k: 141985	n:190000
KS ci ratio: 3.188775e-01	ci left: 6.682291e-04	ci right 9.263427e-04	k: 150	n:190000
HAUS8   190000 perm   48 sec   (3965 perm/sec)   p_kst 7.894737e-04   p_cons 7.472895e-01   p_joint 2.500000e-03

Joint ci ratio: 1.738721e-01	ci left: 2.314576e-03	ci right 2.760038e-03	k: 506	n:200000
Cons ci ratio: 5.097806e-03	ci left: 7.453393e-01	ci right 7.491535e-01	k: 149450	n:200000
KS ci ratio: 3.107518e-01	ci left: 6.716582e-04	ci right 9.231750e-04	k: 158	n:200000
HAUS8   200000 perm   51 sec   (3885 perm/sec)   p_kst 7.900000e-04   p_cons 7.472500e-01   p_joint 2.530000e-03

Joint ci ratio: 1.642566e-01	ci left: 2.482570e-03	ci right 2.931332e-03	k: 567	n:210000
Cons ci ratio: 4.976298e-03	ci left: 7.452829e-01	ci right 7.490056e-01	k: 156901	n:210000
KS ci ratio: 3.059803e-01	ci left: 6.616413e-04	ci right 9.048613e-04	k: 163	n:210000
HAUS8   210000 perm   55 sec   (3811 perm/sec)   p_kst 7.761905e-04   p_cons 7.471476e-01   p_joint 2.700000e-03

Joint ci ratio: 1.252617e-01	ci left: 4.154124e-03	ci right 4.713602e-03	k: 974	n:220000
Cons ci ratio: 4.858169e-03	ci left: 7.456153e-01	ci right 7.492509e-01	k: 164436	n:220000
KS ci ratio: 3.005334e-01	ci left: 6.567643e-04	ci right 8.930732e-04	k: 169	n:220000
HAUS8   220000 perm   60 sec   (3663 perm/sec)   p_kst 7.681818e-04   p_cons 7.474364e-01   p_joint 4.427273e-03

Joint ci ratio: 1.284897e-01	ci left: 3.771389e-03	ci right 4.293406e-03	k: 926	n:230000
Cons ci ratio: 4.751239e-03	ci left: 7.456669e-01	ci right 7.492225e-01	k: 171913	n:230000
KS ci ratio: 2.912560e-01	ci left: 6.724873e-04	ci right 9.056079e-04	k: 180	n:230000
HAUS8   230000 perm   65 sec   (3533 perm/sec)   p_kst 7.826087e-04   p_cons 7.474478e-01   p_joint 4.026087e-03

Joint ci ratio: 1.265953e-01	ci left: 3.727186e-03	ci right 4.234908e-03	k: 954	n:240000
Cons ci ratio: 4.650508e-03	ci left: 7.457610e-01	ci right 7.492414e-01	k: 179401	n:240000
KS ci ratio: 2.850252e-01	ci left: 6.753919e-04	ci right 9.036096e-04	k: 188	n:240000
HAUS8   240000 perm   69 sec   (3479 perm/sec)   p_kst 7.833333e-04   p_cons 7.475042e-01   p_joint 3.975000e-03

Joint ci ratio: 1.236508e-01	ci left: 3.756343e-03	ci right 4.255264e-03	k: 1000	n:250000
Cons ci ratio: 4.555102e-03	ci left: 7.459164e-01	ci right 7.493258e-01	k: 186906	n:250000
KS ci ratio: 2.784714e-01	ci left: 6.818334e-04	ci right 9.060015e-04	k: 197	n:250000
HAUS8   250000 perm   73 sec   (3445 perm/sec)   p_kst 7.880000e-04   p_cons 7.476240e-01   p_joint 4.000000e-03

Joint ci ratio: 1.216043e-01	ci left: 3.738624e-03	ci right 4.226381e-03	k: 1034	n:260000
Cons ci ratio: 4.465473e-03	ci left: 7.460490e-01	ci right 7.493917e-01	k: 194408	n:260000
KS ci ratio: 2.723498e-01	ci left: 6.878347e-04	ci right 9.081545e-04	k: 206	n:260000
HAUS8   260000 perm   76 sec   (3412 perm/sec)   p_kst 7.923077e-04   p_cons 7.477231e-01   p_joint 3.976923e-03

Joint ci ratio: 1.197687e-01	ci left: 3.715095e-03	ci right 4.191947e-03	k: 1066	n:270000
Cons ci ratio: 4.381277e-03	ci left: 7.461426e-01	ci right 7.494225e-01	k: 201902	n:270000
KS ci ratio: 2.697580e-01	ci left: 6.761668e-04	ci right 8.903392e-04	k: 210	n:270000
HAUS8   270000 perm   80 sec   (3376 perm/sec)   p_kst 7.777778e-04   p_cons 7.477852e-01   p_joint 3.948148e-03

Joint ci ratio: 1.175315e-01	ci left: 3.724496e-03	ci right 4.193005e-03	k: 1107	n:280000
Cons ci ratio: 4.302975e-03	ci left: 7.461155e-01	ci right 7.493365e-01	k: 209364	n:280000
KS ci ratio: 2.666188e-01	ci left: 6.686743e-04	ci right 8.775969e-04	k: 215	n:280000
HAUS8   280000 perm   84 sec   (3344 perm/sec)   p_kst 7.678571e-04   p_cons 7.477286e-01   p_joint 3.953571e-03

Joint ci ratio: 1.153649e-01	ci left: 3.736676e-03	ci right 4.197462e-03	k: 1149	n:290000
Cons ci ratio: 4.228416e-03	ci left: 7.461185e-01	ci right 7.492835e-01	k: 216834	n:290000
KS ci ratio: 2.624012e-01	ci left: 6.681540e-04	ci right 8.730697e-04	k: 222	n:290000
HAUS8   290000 perm   88 sec   (3314 perm/sec)   p_kst 7.655172e-04   p_cons 7.477034e-01   p_joint 3.962069e-03

Joint ci ratio: 1.292516e-01	ci left: 2.859052e-03	ci right 3.257310e-03	k: 916	n:300000
Cons ci ratio: 4.157420e-03	ci left: 7.461384e-01	ci right 7.492502e-01	k: 224309	n:300000
KS ci ratio: 2.595092e-01	ci left: 6.614585e-04	ci right 8.617223e-04	k: 227	n:300000
HAUS8   300000 perm   91 sec   (3281 perm/sec)   p_kst 7.566667e-04   p_cons 7.476967e-01   p_joint 3.053333e-03

Joint ci ratio: 1.273229e-01	ci left: 2.854248e-03	ci right 3.245456e-03	k: 944	n:310000
Cons ci ratio: 4.089395e-03	ci left: 7.462027e-01	ci right 7.492636e-01	k: 231798	n:310000
KS ci ratio: 2.572639e-01	ci left: 6.521883e-04	ci right 8.476625e-04	k: 231	n:310000
HAUS8   310000 perm   96 sec   (3244 perm/sec)   p_kst 7.451613e-04   p_cons 7.477355e-01   p_joint 3.045161e-03

Joint ci ratio: 1.255428e-01	ci left: 2.846758e-03	ci right 3.231079e-03	k: 971	n:320000
Cons ci ratio: 4.026470e-03	ci left: 7.460880e-01	ci right 7.491013e-01	k: 239231	n:320000
KS ci ratio: 2.518915e-01	ci left: 6.610641e-04	ci right 8.544120e-04	k: 241	n:320000
HAUS8   320000 perm   100 sec   (3209 perm/sec)   p_kst 7.531250e-04   p_cons 7.475969e-01   p_joint 3.034375e-03

Joint ci ratio: 1.507263e-01	ci left: 1.891262e-03	ci right 2.202435e-03	k: 674	n:330000
Cons ci ratio: 3.963592e-03	ci left: 7.462448e-01	ci right 7.492115e-01	k: 246751	n:330000
KS ci ratio: 2.498365e-01	ci left: 6.523907e-04	ci right 8.414030e-04	k: 245	n:330000
HAUS8   330000 perm   104 sec   (3174 perm/sec)   p_kst 7.424242e-04   p_cons 7.477303e-01   p_joint 2.042424e-03

Joint ci ratio: 1.481153e-01	ci left: 1.903586e-03	ci right 2.210882e-03	k: 698	n:340000
Cons ci ratio: 3.907039e-03	ci left: 7.460567e-01	ci right 7.489802e-01	k: 254157	n:340000
KS ci ratio: 2.449074e-01	ci left: 6.607918e-04	ci right 8.478866e-04	k: 255	n:340000
HAUS8   340000 perm   108 sec   (3139 perm/sec)   p_kst 7.500000e-04   p_cons 7.475206e-01   p_joint 2.052941e-03

Joint ci ratio: 1.464497e-01	ci left: 1.893227e-03	ci right 2.195112e-03	k: 714	n:350000
Cons ci ratio: 3.849369e-03	ci left: 7.462204e-01	ci right 7.491012e-01	k: 261682	n:350000
KS ci ratio: 2.434865e-01	ci left: 6.499586e-04	ci right 8.327569e-04	k: 258	n:350000
HAUS8   350000 perm   113 sec   (3105 perm/sec)   p_kst 7.371429e-04   p_cons 7.476629e-01   p_joint 2.040000e-03

Joint ci ratio: 1.441490e-01	ci left: 1.902204e-03	ci right 2.200346e-03	k: 737	n:360000
Cons ci ratio: 3.793702e-03	ci left: 7.464225e-01	ci right 7.492624e-01	k: 269224	n:360000
KS ci ratio: 2.402615e-01	ci left: 6.501702e-04	ci right 8.302454e-04	k: 265	n:360000
HAUS8   360000 perm   117 sec   (3072 perm/sec)   p_kst 7.361111e-04   p_cons 7.478444e-01   p_joint 2.047222e-03

Joint ci ratio: 1.422347e-01	ci left: 1.902911e-03	ci right 2.196867e-03	k: 757	n:370000
Cons ci ratio: 3.741614e-03	ci left: 7.464895e-01	ci right 7.492904e-01	k: 276720	n:370000
KS ci ratio: 2.384762e-01	ci left: 6.427602e-04	ci right 8.192647e-04	k: 269	n:370000
HAUS8   370000 perm   122 sec   (3040 perm/sec)   p_kst 7.270270e-04   p_cons 7.478919e-01   p_joint 2.045946e-03

Joint ci ratio: 1.403044e-01	ci left: 1.906144e-03	ci right 2.196269e-03	k: 778	n:380000
Cons ci ratio: 3.690429e-03	ci left: 7.466744e-01	ci right 7.494376e-01	k: 284262	n:380000
KS ci ratio: 2.345978e-01	ci left: 6.481264e-04	ci right 8.227900e-04	k: 278	n:380000
HAUS8   380000 perm   126 sec   (3008 perm/sec)   p_kst 7.315789e-04   p_cons 7.480579e-01   p_joint 2.047368e-03

Joint ci ratio: 1.382774e-01	ci left: 1.914189e-03	ci right 2.200982e-03	k: 801	n:390000
Cons ci ratio: 3.643145e-03	ci left: 7.466574e-01	ci right 7.493851e-01	k: 291729	n:390000
KS ci ratio: 2.301044e-01	ci left: 6.580717e-04	ci right 8.315362e-04	k: 289	n:390000
HAUS8   390000 perm   131 sec   (2976 perm/sec)   p_kst 7.410256e-04   p_cons 7.480231e-01   p_joint 2.053846e-03

Joint ci ratio: 1.364188e-01	ci left: 1.919444e-03	ci right 2.202846e-03	k: 823	n:400000
Cons ci ratio: 3.597824e-03	ci left: 7.466214e-01	ci right 7.493150e-01	k: 299188	n:400000
KS ci ratio: 2.273767e-01	ci left: 6.581172e-04	ci right 8.292489e-04	k: 296	n:400000
HAUS8   400000 perm   136 sec   (2945 perm/sec)   p_kst 7.400000e-04   p_cons 7.479700e-01   p_joint 2.057500e-03

Joint ci ratio: 1.342362e-01	ci left: 1.936254e-03	ci right 2.217199e-03	k: 850	n:410000
Cons ci ratio: 3.554705e-03	ci left: 7.465288e-01	ci right 7.491896e-01	k: 306623	n:410000
KS ci ratio: 2.240076e-01	ci left: 6.627760e-04	ci right 8.322132e-04	k: 305	n:410000
HAUS8   410000 perm   141 sec   (2916 perm/sec)   p_kst 7.439024e-04   p_cons 7.478610e-01   p_joint 2.073171e-03

Joint ci ratio: 1.323062e-01	ci left: 1.947693e-03	ci right 2.225915e-03	k: 875	n:420000
Cons ci ratio: 3.510483e-03	ci left: 7.467222e-01	ci right 7.493505e-01	k: 314176	n:420000
KS ci ratio: 2.207839e-01	ci left: 6.672308e-04	ci right 8.350186e-04	k: 314	n:420000
HAUS8   420000 perm   146 sec   (2886 perm/sec)   p_kst 7.476190e-04   p_cons 7.480381e-01   p_joint 2.083333e-03

Joint ci ratio: 1.307483e-01	ci left: 1.949628e-03	ci right 2.224592e-03	k: 896	n:430000
Cons ci ratio: 3.469881e-03	ci left: 7.466878e-01	ci right 7.492856e-01	k: 321635	n:430000
KS ci ratio: 2.170262e-01	ci left: 6.758930e-04	ci right 8.425809e-04	k: 325	n:430000
HAUS8   430000 perm   150 sec   (2858 perm/sec)   p_kst 7.558140e-04   p_cons 7.479884e-01   p_joint 2.083721e-03

Joint ci ratio: 1.293147e-01	ci left: 1.949294e-03	ci right 2.220966e-03	k: 916	n:440000
Cons ci ratio: 3.430779e-03	ci left: 7.466415e-01	ci right 7.492097e-01	k: 329088	n:440000
KS ci ratio: 2.160355e-01	ci left: 6.669799e-04	ci right 8.306191e-04	k: 328	n:440000
HAUS8   440000 perm   156 sec   (2827 perm/sec)   p_kst 7.454545e-04   p_cons 7.479273e-01   p_joint 2.081818e-03

Joint ci ratio: 1.280643e-01	ci left: 1.944688e-03	ci right 2.212898e-03	k: 934	n:450000
Cons ci ratio: 3.392491e-03	ci left: 7.466509e-01	ci right 7.491904e-01	k: 336565	n:450000
KS ci ratio: 2.140925e-01	ci left: 6.647732e-04	ci right 8.262115e-04	k: 334	n:450000
HAUS8   450000 perm   162 sec   (2784 perm/sec)   p_kst 7.422222e-04   p_cons 7.479222e-01   p_joint 2.075556e-03

Joint ci ratio: 1.271843e-01	ci left: 1.929770e-03	ci right 2.193956e-03	k: 947	n:460000
Cons ci ratio: 3.356849e-03	ci left: 7.465032e-01	ci right 7.490154e-01	k: 343970	n:460000
KS ci ratio: 2.122010e-01	ci left: 6.626688e-04	ci right 8.219892e-04	k: 340	n:460000
HAUS8   460000 perm   168 sec   (2743 perm/sec)   p_kst 7.391304e-04   p_cons 7.477609e-01   p_joint 2.058696e-03

Joint ci ratio: 1.257335e-01	ci left: 1.934039e-03	ci right 2.195564e-03	k: 969	n:470000
Cons ci ratio: 3.321576e-03	ci left: 7.464450e-01	ci right 7.489306e-01	k: 351414	n:470000
KS ci ratio: 2.094546e-01	ci left: 6.667076e-04	ci right 8.246583e-04	k: 349	n:470000
HAUS8   470000 perm   173 sec   (2711 perm/sec)   p_kst 7.425532e-04   p_cons 7.476894e-01   p_joint 2.061702e-03

Joint ci ratio: 1.245833e-01	ci left: 1.930073e-03	ci right 2.188497e-03	k: 987	n:480000
Cons ci ratio: 3.285394e-03	ci left: 7.466190e-01	ci right 7.490780e-01	k: 358968	n:480000
KS ci ratio: 2.073910e-01	ci left: 6.666400e-04	ci right 8.228214e-04	k: 356	n:480000
HAUS8   480000 perm   179 sec   (2684 perm/sec)   p_kst 7.416667e-04   p_cons 7.478500e-01   p_joint 2.056250e-03

Joint ci ratio: 1.235872e-01	ci left: 1.922322e-03	ci right 2.177500e-03	k: 1003	n:490000
Cons ci ratio: 3.252040e-03	ci left: 7.465918e-01	ci right 7.490257e-01	k: 366427	n:490000
KS ci ratio: 2.059543e-01	ci left: 6.627110e-04	ci right 8.167607e-04	k: 361	n:490000
HAUS8   490000 perm   184 sec   (2659 perm/sec)   p_kst 7.367347e-04   p_cons 7.478102e-01   p_joint 2.046939e-03

Joint ci ratio: 1.251609e-01	ci left: 1.835426e-03	ci right 2.082402e-03	k: 978	n:500000
Cons ci ratio: 3.218214e-03	ci left: 7.467381e-01	ci right 7.491471e-01	k: 373972	n:500000
KS ci ratio: 2.037155e-01	ci left: 6.646362e-04	ci right 8.172450e-04	k: 369	n:500000
HAUS8   500000 perm   190 sec   (2633 perm/sec)   p_kst 7.380000e-04   p_cons 7.479440e-01   p_joint 1.956000e-03

Joint ci ratio: 1.239638e-01	ci left: 1.835532e-03	ci right 2.079986e-03	k: 997	n:510000
Cons ci ratio: 3.186679e-03	ci left: 7.467295e-01	ci right 7.491148e-01	k: 381441	n:510000
KS ci ratio: 2.023533e-01	ci left: 6.609095e-04	ci right 8.115224e-04	k: 374	n:510000
HAUS8   510000 perm   196 sec   (2607 perm/sec)   p_kst 7.333333e-04   p_cons 7.479235e-01   p_joint 1.954902e-03

Joint ci ratio: 1.229216e-01	ci left: 1.831915e-03	ci right 2.073688e-03	k: 1014	n:520000
Cons ci ratio: 3.155604e-03	ci left: 7.467752e-01	ci right 7.491374e-01	k: 388938	n:520000
KS ci ratio: 2.002287e-01	ci left: 6.628090e-04	ci right 8.120752e-04	k: 382	n:520000
HAUS8   520000 perm   202 sec   (2580 perm/sec)   p_kst 7.346154e-04   p_cons 7.479577e-01   p_joint 1.950000e-03

Joint ci ratio: 1.218462e-01	ci left: 1.830273e-03	ci right 2.069563e-03	k: 1032	n:530000
Cons ci ratio: 3.125951e-03	ci left: 7.467551e-01	ci right 7.490950e-01	k: 396401	n:530000
KS ci ratio: 1.984237e-01	ci left: 6.628516e-04	ci right 8.106188e-04	k: 389	n:530000
HAUS8   530000 perm   207 sec   (2556 perm/sec)   p_kst 7.339623e-04   p_cons 7.479264e-01   p_joint 1.947170e-03

Joint ci ratio: 1.208560e-01	ci left: 1.826905e-03	ci right 2.063675e-03	k: 1049	n:540000
Cons ci ratio: 3.097332e-03	ci left: 7.467099e-01	ci right 7.490281e-01	k: 403850	n:540000
KS ci ratio: 1.966666e-01	ci left: 6.628983e-04	ci right 8.092107e-04	k: 396	n:540000
HAUS8   540000 perm   213 sec   (2532 perm/sec)   p_kst 7.333333e-04   p_cons 7.478704e-01   p_joint 1.942593e-03

Joint ci ratio: 1.200589e-01	ci left: 1.818376e-03	ci right 2.052375e-03	k: 1063	n:550000
Cons ci ratio: 3.068923e-03	ci left: 7.467357e-01	ci right 7.490326e-01	k: 411337	n:550000
KS ci ratio: 1.951974e-01	ci left: 6.612195e-04	ci right 8.059414e-04	k: 402	n:550000
HAUS8   550000 perm   223 sec   (2469 perm/sec)   p_kst 7.309091e-04   p_cons 7.478855e-01   p_joint 1.932727e-03

Joint ci ratio: 1.155260e-01	ci left: 1.933226e-03	ci right 2.171972e-03	k: 1148	n:560000
Cons ci ratio: 3.040503e-03	ci left: 7.468571e-01	ci right 7.491332e-01	k: 418878	n:560000
KS ci ratio: 1.921222e-01	ci left: 6.715012e-04	ci right 8.158876e-04	k: 415	n:560000
HAUS8   560000 perm   230 sec   (2438 perm/sec)   p_kst 7.410714e-04   p_cons 7.479964e-01   p_joint 2.050000e-03

Joint ci ratio: 1.145335e-01	ci left: 1.933388e-03	ci right 2.169964e-03	k: 1168	n:570000
Cons ci ratio: 3.012592e-03	ci left: 7.470078e-01	ci right 7.492634e-01	k: 426438	n:570000
KS ci ratio: 1.907518e-01	ci left: 6.697423e-04	ci right 8.126040e-04	k: 421	n:570000
HAUS8   570000 perm   237 sec   (2408 perm/sec)   p_kst 7.385965e-04   p_cons 7.481368e-01   p_joint 2.049123e-03

Joint ci ratio: 1.136620e-01	ci left: 1.930203e-03	ci right 2.164471e-03	k: 1186	n:580000
Cons ci ratio: 2.986281e-03	ci left: 7.470463e-01	ci right 7.492822e-01	k: 433936	n:580000
KS ci ratio: 1.891892e-01	ci left: 6.696900e-04	ci right 8.112359e-04	k: 428	n:580000
HAUS8   580000 perm   243 sec   (2389 perm/sec)   p_kst 7.379310e-04   p_cons 7.481655e-01   p_joint 2.044828e-03

Joint ci ratio: 1.125298e-01	ci left: 1.937015e-03	ci right 2.169613e-03	k: 1210	n:590000
Cons ci ratio: 2.961327e-03	ci left: 7.469970e-01	ci right 7.492141e-01	k: 441383	n:590000
KS ci ratio: 1.874494e-01	ci left: 6.712594e-04	ci right 8.116839e-04	k: 436	n:590000
HAUS8   590000 perm   249 sec   (2369 perm/sec)   p_kst 7.389831e-04   p_cons 7.481068e-01   p_joint 2.050847e-03

Joint ci ratio: 1.115666e-01	ci left: 1.938750e-03	ci right 2.169433e-03	k: 1231	n:600000
Cons ci ratio: 2.936274e-03	ci left: 7.470413e-01	ci right 7.492397e-01	k: 448885	n:600000
KS ci ratio: 1.853404e-01	ci left: 6.759609e-04	ci right 8.155991e-04	k: 446	n:600000
HAUS8   600000 perm   256 sec   (2348 perm/sec)   p_kst 7.433333e-04   p_cons 7.481417e-01   p_joint 2.051667e-03

Joint ci ratio: 1.105834e-01	ci left: 1.942031e-03	ci right 2.170936e-03	k: 1253	n:610000
Cons ci ratio: 2.911732e-03	ci left: 7.470989e-01	ci right 7.492790e-01	k: 456396	n:610000
KS ci ratio: 1.827019e-01	ci left: 6.852097e-04	ci right 8.245203e-04	k: 459	n:610000
HAUS8   610000 perm   262 sec   (2329 perm/sec)   p_kst 7.524590e-04   p_cons 7.481902e-01   p_joint 2.054098e-03

Joint ci ratio: 1.096259e-01	ci left: 1.945215e-03	ci right 2.172381e-03	k: 1275	n:620000
Cons ci ratio: 2.887226e-03	ci left: 7.472291e-01	ci right 7.493912e-01	k: 463953	n:620000
KS ci ratio: 1.813275e-01	ci left: 6.849338e-04	ci right 8.230258e-04	k: 466	n:620000
HAUS8   620000 perm   268 sec   (2311 perm/sec)   p_kst 7.516129e-04   p_cons 7.483113e-01   p_joint 2.056452e-03

Joint ci ratio: 1.086089e-01	ci left: 1.951395e-03	ci right 2.177033e-03	k: 1299	n:630000
Cons ci ratio: 2.864451e-03	ci left: 7.472073e-01	ci right 7.493523e-01	k: 471417	n:630000
KS ci ratio: 1.801740e-01	ci left: 6.831547e-04	ci right 8.199162e-04	k: 472	n:630000
HAUS8   630000 perm   275 sec   (2292 perm/sec)   p_kst 7.492063e-04   p_cons 7.482810e-01   p_joint 2.061905e-03

Joint ci ratio: 1.076605e-01	ci left: 1.955870e-03	ci right 2.179926e-03	k: 1322	n:640000
Cons ci ratio: 2.842477e-03	ci left: 7.471503e-01	ci right 7.492787e-01	k: 478858	n:640000
KS ci ratio: 1.788555e-01	ci left: 6.829265e-04	ci right 8.185335e-04	k: 479	n:640000
HAUS8   640000 perm   281 sec   (2274 perm/sec)   p_kst 7.484375e-04   p_cons 7.482156e-01   p_joint 2.065625e-03

Joint ci ratio: 1.068161e-01	ci left: 1.957221e-03	ci right 2.179562e-03	k: 1343	n:650000
Cons ci ratio: 2.820713e-03	ci left: 7.471337e-01	ci right 7.492456e-01	k: 486324	n:650000
KS ci ratio: 1.772017e-01	ci left: 6.856492e-04	ci right 8.204031e-04	k: 488	n:650000
HAUS8   650000 perm   288 sec   (2255 perm/sec)   p_kst 7.507692e-04   p_cons 7.481908e-01   p_joint 2.066154e-03

Joint ci ratio: 1.060691e-01	ci left: 1.955587e-03	ci right 2.176093e-03	k: 1362	n:660000
Cons ci ratio: 2.798755e-03	ci left: 7.472102e-01	ci right 7.493058e-01	k: 493851	n:660000
KS ci ratio: 1.757697e-01	ci left: 6.868463e-04	ci right 8.206288e-04	k: 496	n:660000
HAUS8   660000 perm   295 sec   (2236 perm/sec)   p_kst 7.515152e-04   p_cons 7.482591e-01   p_joint 2.063636e-03

Joint ci ratio: 1.055291e-01	ci left: 1.946742e-03	ci right 2.165062e-03	k: 1376	n:670000
Cons ci ratio: 2.778006e-03	ci left: 7.471888e-01	ci right 7.492688e-01	k: 501314	n:670000
KS ci ratio: 1.752422e-01	ci left: 6.808756e-04	ci right 8.130550e-04	k: 499	n:670000
HAUS8   670000 perm   302 sec   (2219 perm/sec)   p_kst 7.447761e-04   p_cons 7.482299e-01   p_joint 2.053731e-03

Joint ci ratio: 1.051868e-01	ci left: 1.930999e-03	ci right 2.146808e-03	k: 1385	n:680000
Cons ci ratio: 2.757184e-03	ci left: 7.472402e-01	ci right 7.493048e-01	k: 508826	n:680000
KS ci ratio: 1.747194e-01	ci left: 6.750811e-04	ci right 8.057033e-04	k: 502	n:680000
HAUS8   680000 perm   309 sec   (2203 perm/sec)   p_kst 7.382353e-04   p_cons 7.482735e-01   p_joint 2.036765e-03

Joint ci ratio: 1.046226e-01	ci left: 1.924182e-03	ci right 2.138005e-03	k: 1400	n:690000
Cons ci ratio: 2.737413e-03	ci left: 7.472089e-01	ci right 7.492586e-01	k: 516282	n:690000
KS ci ratio: 1.736867e-01	ci left: 6.736138e-04	ci right 8.031010e-04	k: 508	n:690000
HAUS8   690000 perm   316 sec   (2186 perm/sec)   p_kst 7.362319e-04   p_cons 7.482348e-01   p_joint 2.028986e-03

Joint ci ratio: 1.037740e-01	ci left: 1.928694e-03	ci right 2.141175e-03	k: 1423	n:700000
Cons ci ratio: 2.718051e-03	ci left: 7.471800e-01	ci right 7.492151e-01	k: 523739	n:700000
KS ci ratio: 1.725046e-01	ci left: 6.735575e-04	ci right 8.020609e-04	k: 515	n:700000
HAUS8   700000 perm   323 sec   (2169 perm/sec)   p_kst 7.357143e-04   p_cons 7.481986e-01   p_joint 2.032857e-03

Joint ci ratio: 1.032321e-01	ci left: 1.922109e-03	ci right 2.132691e-03	k: 1438	n:710000
Cons ci ratio: 2.699487e-03	ci left: 7.470970e-01	ci right 7.491179e-01	k: 531157	n:710000
KS ci ratio: 1.716752e-01	ci left: 6.708096e-04	ci right 7.981097e-04	k: 520	n:710000
HAUS8   710000 perm   330 sec   (2152 perm/sec)   p_kst 7.323944e-04   p_cons 7.481085e-01   p_joint 2.025352e-03

Joint ci ratio: 1.023816e-01	ci left: 1.927890e-03	ci right 2.137260e-03	k: 1462	n:720000
Cons ci ratio: 2.680143e-03	ci left: 7.471790e-01	ci right 7.491856e-01	k: 538692	n:720000
KS ci ratio: 1.708576e-01	ci left: 6.681395e-04	ci right 7.942668e-04	k: 525	n:720000
HAUS8   720000 perm   337 sec   (2136 perm/sec)   p_kst 7.291667e-04   p_cons 7.481833e-01   p_joint 2.030556e-03

Joint ci ratio: 1.016546e-01	ci left: 1.929513e-03	ci right 2.137484e-03	k: 1483	n:730000
Cons ci ratio: 2.661856e-03	ci left: 7.471670e-01	ci right 7.491598e-01	k: 546160	n:730000
KS ci ratio: 1.695728e-01	ci left: 6.694790e-04	ci right 7.948117e-04	k: 533	n:730000
HAUS8   730000 perm   344 sec   (2121 perm/sec)   p_kst 7.301370e-04   p_cons 7.481644e-01   p_joint 2.031507e-03

Joint ci ratio: 1.008087e-01	ci left: 1.936368e-03	ci right 2.143237e-03	k: 1508	n:740000
Cons ci ratio: 2.643057e-03	ci left: 7.472811e-01	ci right 7.492602e-01	k: 553721	n:740000
KS ci ratio: 1.689416e-01	ci left: 6.656083e-04	ci right 7.897053e-04	k: 537	n:740000
HAUS8   740000 perm   351 sec   (2107 perm/sec)   p_kst 7.256757e-04   p_cons 7.482716e-01   p_joint 2.037838e-03

Joint ci ratio: 1.001144e-01	ci left: 1.937846e-03	ci right 2.143364e-03	k: 1529	n:750000
Cons ci ratio: 2.625217e-03	ci left: 7.473108e-01	ci right 7.492766e-01	k: 561221	n:750000
KS ci ratio: 1.678532e-01	ci left: 6.656735e-04	ci right 7.889022e-04	k: 544	n:750000
HAUS8   750000 perm   359 sec   (2092 perm/sec)   p_kst 7.253333e-04   p_cons 7.482947e-01   p_joint 2.038667e-03

Joint ci ratio: 9.933809e-02	ci left: 1.943140e-03	ci right 2.147528e-03	k: 1553	n:760000
Cons ci ratio: 2.608207e-03	ci left: 7.472713e-01	ci right 7.492242e-01	k: 568669	n:760000
KS ci ratio: 1.655891e-01	ci left: 6.758283e-04	ci right 7.990811e-04	k: 559	n:760000
HAUS8   760000 perm   366 sec   (2077 perm/sec)   p_kst 7.355263e-04   p_cons 7.482487e-01   p_joint 2.043421e-03

Joint ci ratio: 9.879938e-02	ci left: 1.939435e-03	ci right 2.142263e-03	k: 1570	n:770000
Cons ci ratio: 2.590585e-03	ci left: 7.473694e-01	ci right 7.493093e-01	k: 576222	n:770000
KS ci ratio: 1.641298e-01	ci left: 6.795026e-04	ci right 8.022257e-04	k: 569	n:770000
HAUS8   770000 perm   373 sec   (2063 perm/sec)   p_kst 7.389610e-04   p_cons 7.483403e-01   p_joint 2.038961e-03

Joint ci ratio: 9.836248e-02	ci left: 1.932076e-03	ci right 2.133189e-03	k: 1584	n:780000
Cons ci ratio: 2.573850e-03	ci left: 7.473867e-01	ci right 7.493141e-01	k: 583714	n:780000
KS ci ratio: 1.629900e-01	ci left: 6.806277e-04	ci right 8.026166e-04	k: 577	n:780000
HAUS8   780000 perm   381 sec   (2049 perm/sec)   p_kst 7.397436e-04   p_cons 7.483513e-01   p_joint 2.030769e-03

Joint ci ratio: 9.774773e-02	ci left: 1.932315e-03	ci right 2.132124e-03	k: 1604	n:790000
Cons ci ratio: 2.557538e-03	ci left: 7.473883e-01	ci right 7.493035e-01	k: 591194	n:790000
KS ci ratio: 1.624293e-01	ci left: 6.768692e-04	ci right 7.977263e-04	k: 581	n:790000
HAUS8   790000 perm   388 sec   (2036 perm/sec)   p_kst 7.354430e-04   p_cons 7.483468e-01   p_joint 2.030380e-03

Joint ci ratio: 9.717432e-02	ci left: 1.931332e-03	ci right 2.129801e-03	k: 1623	n:800000
Cons ci ratio: 2.541575e-03	ci left: 7.473838e-01	ci right 7.492869e-01	k: 598669	n:800000
KS ci ratio: 1.611876e-01	ci left: 6.792028e-04	ci right 7.994598e-04	k: 590	n:800000
HAUS8   800000 perm   396 sec   (2021 perm/sec)   p_kst 7.375000e-04   p_cons 7.483363e-01   p_joint 2.028750e-03

Joint ci ratio: 9.640533e-02	ci left: 1.938811e-03	ci right 2.136383e-03	k: 1649	n:810000
Cons ci ratio: 2.525915e-03	ci left: 7.473781e-01	ci right 7.492695e-01	k: 606143	n:810000
KS ci ratio: 1.595752e-01	ci left: 6.850380e-04	ci right 8.049986e-04	k: 602	n:810000
HAUS8   810000 perm   404 sec   (2006 perm/sec)   p_kst 7.432099e-04   p_cons 7.483247e-01   p_joint 2.035802e-03

Joint ci ratio: 9.585510e-02	ci left: 1.937780e-03	ci right 2.134057e-03	k: 1668	n:820000
Cons ci ratio: 2.509956e-03	ci left: 7.474605e-01	ci right 7.493402e-01	k: 613689	n:820000
KS ci ratio: 1.587873e-01	ci left: 6.837095e-04	ci right 8.027899e-04	k: 608	n:820000
HAUS8   820000 perm   412 sec   (1991 perm/sec)   p_kst 7.414634e-04   p_cons 7.484012e-01   p_joint 2.034146e-03

Joint ci ratio: 9.796680e-02	ci left: 1.830959e-03	ci right 2.020736e-03	k: 1597	n:830000
Cons ci ratio: 2.494367e-03	ci left: 7.475301e-01	ci right 7.493983e-01	k: 621226	n:830000
KS ci ratio: 1.580110e-01	ci left: 6.824143e-04	ci right 8.006330e-04	k: 614	n:830000
HAUS8   830000 perm   420 sec   (1977 perm/sec)   p_kst 7.397590e-04   p_cons 7.484651e-01   p_joint 1.924096e-03

Joint ci ratio: 9.729917e-02	ci left: 1.834713e-03	ci right 2.023510e-03	k: 1619	n:840000
Cons ci ratio: 2.479261e-03	ci left: 7.475683e-01	ci right 7.494252e-01	k: 628738	n:840000
KS ci ratio: 1.569931e-01	ci left: 6.834388e-04	ci right 8.010005e-04	k: 622	n:840000
HAUS8   840000 perm   428 sec   (1962 perm/sec)   p_kst 7.404762e-04   p_cons 7.484976e-01   p_joint 1.927381e-03

Joint ci ratio: 9.649790e-02	ci left: 1.844124e-03	ci right 2.032237e-03	k: 1646	n:850000
Cons ci ratio: 2.464941e-03	ci left: 7.475267e-01	ci right 7.493728e-01	k: 636183	n:850000
KS ci ratio: 1.555022e-01	ci left: 6.889642e-04	ci right 8.062460e-04	k: 634	n:850000
HAUS8   850000 perm   436 sec   (1948 perm/sec)   p_kst 7.458824e-04   p_cons 7.484506e-01   p_joint 1.936471e-03

Joint ci ratio: 9.310538e-02	ci left: 1.961184e-03	ci right 2.153822e-03	k: 1768	n:860000
Cons ci ratio: 2.450345e-03	ci left: 7.475665e-01	ci right 7.494016e-01	k: 643697	n:860000
KS ci ratio: 1.539340e-01	ci left: 6.954842e-04	ci right 8.125718e-04	k: 647	n:860000
HAUS8   860000 perm   445 sec   (1934 perm/sec)   p_kst 7.523256e-04   p_cons 7.484849e-01   p_joint 2.055814e-03

Joint ci ratio: 9.268741e-02	ci left: 1.956605e-03	ci right 2.147884e-03	k: 1784	n:870000
Cons ci ratio: 2.436102e-03	ci left: 7.475903e-01	ci right 7.494149e-01	k: 651198	n:870000
KS ci ratio: 1.532264e-01	ci left: 6.941216e-04	ci right 8.103934e-04	k: 653	n:870000
HAUS8   870000 perm   453 sec   (1922 perm/sec)   p_kst 7.505747e-04   p_cons 7.485034e-01   p_joint 2.050575e-03

Joint ci ratio: 9.227501e-02	ci left: 1.952132e-03	ci right 2.142079e-03	k: 1800	n:880000
Cons ci ratio: 2.422484e-03	ci left: 7.475546e-01	ci right 7.493688e-01	k: 658647	n:880000
KS ci ratio: 1.524130e-01	ci left: 6.938843e-04	ci right 8.094428e-04	k: 660	n:880000
HAUS8   880000 perm   461 sec   (1910 perm/sec)   p_kst 7.500000e-04   p_cons 7.484625e-01   p_joint 2.045455e-03

Joint ci ratio: 9.169126e-02	ci left: 1.955446e-03	ci right 2.144447e-03	k: 1823	n:890000
Cons ci ratio: 2.408841e-03	ci left: 7.475590e-01	ci right 7.493630e-01	k: 666131	n:890000
KS ci ratio: 1.508236e-01	ci left: 7.012216e-04	ci right 8.166744e-04	k: 674	n:890000
HAUS8   890000 perm   469 sec   (1898 perm/sec)   p_kst 7.573034e-04   p_cons 7.484618e-01   p_joint 2.048315e-03

Joint ci ratio: 9.129196e-02	ci left: 1.951090e-03	ci right 2.138805e-03	k: 1839	n:900000
Cons ci ratio: 2.395645e-03	ci left: 7.475288e-01	ci right 7.493229e-01	k: 673584	n:900000
KS ci ratio: 1.500476e-01	ci left: 7.009152e-04	ci right 8.156706e-04	k: 681	n:900000
HAUS8   900000 perm   477 sec   (1885 perm/sec)   p_kst 7.566667e-04   p_cons 7.484267e-01   p_joint 2.043333e-03

Joint ci ratio: 9.070216e-02	ci left: 1.955423e-03	ci right 2.142275e-03	k: 1863	n:910000
Cons ci ratio: 2.382691e-03	ci left: 7.474950e-01	ci right 7.492792e-01	k: 681033	n:910000
KS ci ratio: 1.493920e-01	ci left: 6.995592e-04	ci right 8.135474e-04	k: 687	n:910000
HAUS8   910000 perm   486 sec   (1873 perm/sec)   p_kst 7.549451e-04   p_cons 7.483879e-01   p_joint 2.047253e-03

Joint ci ratio: 9.024347e-02	ci left: 1.954353e-03	ci right 2.140108e-03	k: 1882	n:920000
Cons ci ratio: 2.369596e-03	ci left: 7.475174e-01	ci right 7.492919e-01	k: 688533	n:920000
KS ci ratio: 1.485309e-01	ci left: 7.003269e-04	ci right 8.137240e-04	k: 695	n:920000
HAUS8   920000 perm   494 sec   (1861 perm/sec)   p_kst 7.554348e-04   p_cons 7.484054e-01   p_joint 2.045652e-03

Joint ci ratio: 8.976802e-02	ci left: 1.954360e-03	ci right 2.139086e-03	k: 1902	n:930000
Cons ci ratio: 2.356876e-03	ci left: 7.475135e-01	ci right 7.492785e-01	k: 696009	n:930000
KS ci ratio: 1.480005e-01	ci left: 6.979733e-04	ci right 8.105500e-04	k: 700	n:930000
HAUS8   930000 perm   503 sec   (1849 perm/sec)   p_kst 7.526882e-04   p_cons 7.483968e-01   p_joint 2.045161e-03

Joint ci ratio: 9.159569e-02	ci left: 1.855587e-03	ci right 2.034739e-03	k: 1827	n:940000
Cons ci ratio: 2.344431e-03	ci left: 7.474981e-01	ci right 7.492536e-01	k: 703474	n:940000
KS ci ratio: 1.470593e-01	ci left: 6.997692e-04	ci right 8.118548e-04	k: 709	n:940000
HAUS8   940000 perm   512 sec   (1838 perm/sec)   p_kst 7.542553e-04   p_cons 7.483766e-01   p_joint 1.943617e-03

Joint ci ratio: 9.109867e-02	ci left: 1.856626e-03	ci right 2.034854e-03	k: 1847	n:950000
Cons ci ratio: 2.332169e-03	ci left: 7.474850e-01	ci right 7.492313e-01	k: 710941	n:950000
KS ci ratio: 1.462377e-01	ci left: 7.005153e-04	ci right 8.120387e-04	k: 717	n:950000
HAUS8   950000 perm   520 sec   (1826 perm/sec)   p_kst 7.547368e-04   p_cons 7.483589e-01   p_joint 1.944211e-03

Joint ci ratio: 9.058536e-02	ci left: 1.858664e-03	ci right 2.036029e-03	k: 1868	n:960000
Cons ci ratio: 2.319968e-03	ci left: 7.474932e-01	ci right 7.492303e-01	k: 718428	n:960000
KS ci ratio: 1.456306e-01	ci left: 6.992400e-04	ci right 8.100581e-04	k: 723	n:960000
HAUS8   960000 perm   529 sec   (1814 perm/sec)   p_kst 7.531250e-04   p_cons 7.483625e-01   p_joint 1.945833e-03

Joint ci ratio: 8.765128e-02	ci left: 1.967518e-03	ci right 2.148878e-03	k: 1995	n:970000
Cons ci ratio: 2.307705e-03	ci left: 7.475424e-01	ci right 7.492705e-01	k: 725955	n:970000
KS ci ratio: 1.445365e-01	ci left: 7.029600e-04	ci right 8.134584e-04	k: 734	n:970000
HAUS8   970000 perm   538 sec   (1803 perm/sec)   p_kst 7.567010e-04   p_cons 7.484072e-01   p_joint 2.056701e-03

Joint ci ratio: 8.712888e-02	ci left: 1.971396e-03	ci right 2.151975e-03	k: 2019	n:980000
Cons ci ratio: 2.296324e-03	ci left: 7.474773e-01	ci right 7.491967e-01	k: 733371	n:980000
KS ci ratio: 1.434667e-01	ci left: 7.066071e-04	ci right 8.167863e-04	k: 745	n:980000
HAUS8   980000 perm   547 sec   (1792 perm/sec)   p_kst 7.602041e-04   p_cons 7.483378e-01   p_joint 2.060204e-03

Joint ci ratio: 8.663694e-02	ci left: 1.974211e-03	ci right 2.153975e-03	k: 2042	n:990000
Cons ci ratio: 2.284730e-03	ci left: 7.474762e-01	ci right 7.491870e-01	k: 740849	n:990000
KS ci ratio: 1.427983e-01	ci left: 7.062872e-04	ci right 8.158597e-04	k: 752	n:990000
HAUS8   990000 perm   556 sec   (1782 perm/sec)   p_kst 7.595960e-04   p_cons 7.483323e-01   p_joint 2.062626e-03

Joint ci ratio: 8.625789e-02	ci left: 1.972079e-03	ci right 2.150824e-03	k: 2060	n:1000000
Cons ci ratio: 2.273026e-03	ci left: 7.475223e-01	ci right 7.492243e-01	k: 748374	n:1000000
KS ci ratio: 1.422329e-01	ci left: 7.050103e-04	ci right 8.139150e-04	k: 758	n:1000000
HAUS8   1000000 perm   565 sec   (1771 perm/sec)   p_kst 7.580000e-04   p_cons 7.483740e-01   p_joint 2.060000e-03

Joint ci ratio: 8.582176e-02	ci left: 1.972899e-03	ci right 2.150768e-03	k: 2081	n:1010000
Cons ci ratio: 2.261732e-03	ci left: 7.475287e-01	ci right 7.492223e-01	k: 755860	n:1010000
KS ci ratio: 1.413049e-01	ci left: 7.075799e-04	ci right 8.161083e-04	k: 768	n:1010000
HAUS8   1010000 perm   574 sec   (1760 perm/sec)   p_kst 7.603960e-04   p_cons 7.483762e-01   p_joint 2.060396e-03

Joint ci ratio: 8.541252e-02	ci left: 1.972744e-03	ci right 2.149710e-03	k: 2101	n:1020000
Cons ci ratio: 2.250552e-03	ci left: 7.475439e-01	ci right 7.492292e-01	k: 763355	n:1020000
KS ci ratio: 1.403048e-01	ci left: 7.110473e-04	ci right 8.192711e-04	k: 779	n:1020000
HAUS8   1020000 perm   583 sec   (1750 perm/sec)   p_kst 7.637255e-04   p_cons 7.483873e-01   p_joint 2.059804e-03

Joint ci ratio: 8.500908e-02	ci left: 1.972595e-03	ci right 2.148670e-03	k: 2121	n:1030000
Cons ci ratio: 2.239328e-03	ci left: 7.475938e-01	ci right 7.492708e-01	k: 770886	n:1030000
KS ci ratio: 1.398574e-01	ci left: 7.088281e-04	ci right 8.163415e-04	k: 784	n:1030000
HAUS8   1030000 perm   592 sec   (1740 perm/sec)   p_kst 7.611650e-04   p_cons 7.484330e-01   p_joint 2.059223e-03

Joint ci ratio: 8.467075e-02	ci left: 1.969627e-03	ci right 2.144703e-03	k: 2138	n:1040000
Cons ci ratio: 2.228510e-03	ci left: 7.476024e-01	ci right 7.492712e-01	k: 778375	n:1040000
KS ci ratio: 1.393261e-01	ci left: 7.075802e-04	ci right 8.144626e-04	k: 790	n:1040000
HAUS8   1040000 perm   601 sec   (1729 perm/sec)   p_kst 7.596154e-04   p_cons 7.484375e-01   p_joint 2.055769e-03

Joint ci ratio: 8.421907e-02	ci left: 1.972311e-03	ci right 2.146644e-03	k: 2161	n:1050000
Cons ci ratio: 2.217571e-03	ci left: 7.476575e-01	ci right 7.493183e-01	k: 785913	n:1050000
KS ci ratio: 1.383671e-01	ci left: 7.109537e-04	ci right 8.175456e-04	k: 801	n:1050000
HAUS8   1050000 perm   611 sec   (1719 perm/sec)   p_kst 7.628571e-04   p_cons 7.484886e-01   p_joint 2.058095e-03

Joint ci ratio: 8.367866e-02	ci left: 1.979565e-03	ci right 2.153362e-03	k: 2189	n:1060000
Cons ci ratio: 2.206876e-03	ci left: 7.476974e-01	ci right 7.493503e-01	k: 793436	n:1060000
KS ci ratio: 1.376821e-01	ci left: 7.115332e-04	ci right 8.176405e-04	k: 809	n:1060000
HAUS8   1060000 perm   620 sec   (1708 perm/sec)   p_kst 7.632075e-04   p_cons 7.485245e-01   p_joint 2.065094e-03

Joint ci ratio: 8.333698e-02	ci left: 1.977536e-03	ci right 2.150411e-03	k: 2207	n:1070000
Cons ci ratio: 2.196747e-03	ci left: 7.476655e-01	ci right 7.493107e-01	k: 800883	n:1070000
KS ci ratio: 1.371750e-01	ci left: 7.102980e-04	ci right 8.157992e-04	k: 815	n:1070000
HAUS8   1070000 perm   630 sec   (1698 perm/sec)   p_kst 7.616822e-04   p_cons 7.484888e-01   p_joint 2.062617e-03

Joint ci ratio: 8.294347e-02	ci left: 1.978266e-03	ci right 2.150348e-03	k: 2228	n:1080000
Cons ci ratio: 2.185956e-03	ci left: 7.477724e-01	ci right 7.494096e-01	k: 808479	n:1080000
KS ci ratio: 1.365075e-01	ci left: 7.108750e-04	ci right 8.159064e-04	k: 823	n:1080000
HAUS8   1080000 perm   640 sec   (1688 perm/sec)   p_kst 7.620370e-04   p_cons 7.485917e-01   p_joint 2.062963e-03

Joint ci ratio: 8.255548e-02	ci left: 1.978984e-03	ci right 2.150285e-03	k: 2249	n:1090000
Cons ci ratio: 2.175911e-03	ci left: 7.477753e-01	ci right 7.494050e-01	k: 815964	n:1090000
KS ci ratio: 1.357680e-01	ci left: 7.123289e-04	ci right 8.169589e-04	k: 832	n:1090000
HAUS8   1090000 perm   650 sec   (1677 perm/sec)   p_kst 7.633028e-04   p_cons 7.485908e-01   p_joint 2.063303e-03

Joint ci ratio: 8.213665e-02	ci left: 1.981472e-03	ci right 2.152076e-03	k: 2272	n:1100000
Cons ci ratio: 2.166055e-03	ci left: 7.477691e-01	ci right 7.493914e-01	k: 823439	n:1100000
KS ci ratio: 1.348002e-01	ci left: 7.163931e-04	ci right 8.208099e-04	k: 844	n:1100000
HAUS8   1100000 perm   660 sec   (1667 perm/sec)   p_kst 7.672727e-04   p_cons 7.485809e-01   p_joint 2.065455e-03

Joint ci ratio: 8.179556e-02	ci left: 1.980387e-03	ci right 2.150156e-03	k: 2291	n:1110000
Cons ci ratio: 2.156331e-03	ci left: 7.477630e-01	ci right 7.493780e-01	k: 830914	n:1110000
KS ci ratio: 1.342454e-01	ci left: 7.160332e-04	ci right 8.199337e-04	k: 851	n:1110000
HAUS8   1110000 perm   670 sec   (1656 perm/sec)   p_kst 7.666667e-04   p_cons 7.485712e-01   p_joint 2.063964e-03

Joint ci ratio: 8.142338e-02	ci left: 1.981072e-03	ci right 2.150091e-03	k: 2312	n:1120000
Cons ci ratio: 2.146728e-03	ci left: 7.477588e-01	ci right 7.493667e-01	k: 838391	n:1120000
KS ci ratio: 1.335418e-01	ci left: 7.174066e-04	ci right 8.209175e-04	k: 860	n:1120000
HAUS8   1120000 perm   680 sec   (1647 perm/sec)   p_kst 7.678571e-04   p_cons 7.485634e-01   p_joint 2.064286e-03

Joint ci ratio: 8.319069e-02	ci left: 1.879462e-03	ci right 2.043461e-03	k: 2215	n:1130000
Cons ci ratio: 2.137326e-03	ci left: 7.477415e-01	ci right 7.493422e-01	k: 845853	n:1130000
KS ci ratio: 1.328492e-01	ci left: 7.187571e-04	ci right 8.218826e-04	k: 869	n:1130000
HAUS8   1130000 perm   690 sec   (1637 perm/sec)   p_kst 7.690265e-04   p_cons 7.485425e-01   p_joint 1.960177e-03

Joint ci ratio: 8.065971e-02	ci left: 1.984131e-03	ci right 2.151748e-03	k: 2356	n:1140000
Cons ci ratio: 2.128122e-03	ci left: 7.477113e-01	ci right 7.493050e-01	k: 853300	n:1140000
KS ci ratio: 1.323936e-01	ci left: 7.175408e-04	ci right 8.201108e-04	k: 875	n:1140000
HAUS8   1140000 perm   701 sec   (1627 perm/sec)   p_kst 7.675439e-04   p_cons 7.485088e-01   p_joint 2.066667e-03

Joint ci ratio: 8.025205e-02	ci left: 1.987327e-03	ci right 2.154327e-03	k: 2380	n:1150000
Cons ci ratio: 2.119036e-03	ci left: 7.476816e-01	ci right 7.492685e-01	k: 860747	n:1150000
KS ci ratio: 1.317186e-01	ci left: 7.188689e-04	ci right 8.210639e-04	k: 884	n:1150000
HAUS8   1150000 perm   711 sec   (1618 perm/sec)   p_kst 7.686957e-04   p_cons 7.484757e-01   p_joint 2.069565e-03

Joint ci ratio: 7.998392e-02	ci left: 1.983712e-03	ci right 2.149825e-03	k: 2396	n:1160000
Cons ci ratio: 2.109683e-03	ci left: 7.477206e-01	ci right 7.493006e-01	k: 868273	n:1160000
KS ci ratio: 1.313482e-01	ci left: 7.168402e-04	ci right 8.184379e-04	k: 889	n:1160000
HAUS8   1160000 perm   722 sec   (1608 perm/sec)   p_kst 7.663793e-04   p_cons 7.485112e-01   p_joint 2.065517e-03

Joint ci ratio: 7.966885e-02	ci left: 1.982672e-03	ci right 2.148013e-03	k: 2415	n:1170000
Cons ci ratio: 2.100429e-03	ci left: 7.477633e-01	ci right 7.493364e-01	k: 875804	n:1170000
KS ci ratio: 1.307618e-01	ci left: 7.173268e-04	ci right 8.185043e-04	k: 897	n:1170000
HAUS8   1170000 perm   732 sec   (1599 perm/sec)   p_kst 7.666667e-04   p_cons 7.485504e-01   p_joint 2.064103e-03

Joint ci ratio: 7.925968e-02	ci left: 1.986635e-03	ci right 2.151417e-03	k: 2440	n:1180000
Cons ci ratio: 2.091456e-03	ci left: 7.477764e-01	ci right 7.493428e-01	k: 883301	n:1180000
KS ci ratio: 1.296118e-01	ci left: 7.243656e-04	ci right 8.255683e-04	k: 913	n:1180000
HAUS8   1180000 perm   742 sec   (1590 perm/sec)   p_kst 7.737288e-04   p_cons 7.485602e-01   p_joint 2.067797e-03

Joint ci ratio: 7.903359e-02	ci left: 1.981473e-03	ci right 2.145336e-03	k: 2454	n:1190000
Cons ci ratio: 2.082406e-03	ci left: 7.478237e-01	ci right 7.493835e-01	k: 890839	n:1190000
KS ci ratio: 1.291886e-01	ci left: 7.231573e-04	ci right 8.238359e-04	k: 919	n:1190000
HAUS8   1190000 perm   753 sec   (1581 perm/sec)   p_kst 7.722689e-04   p_cons 7.486042e-01   p_joint 2.062185e-03

Joint ci ratio: 7.876148e-02	ci left: 1.978847e-03	ci right 2.141904e-03	k: 2471	n:1200000
Cons ci ratio: 2.073642e-03	ci left: 7.478395e-01	ci right 7.493927e-01	k: 898340	n:1200000
KS ci ratio: 1.287694e-01	ci left: 7.219696e-04	ci right 8.221319e-04	k: 925	n:1200000
HAUS8   1200000 perm   763 sec   (1572 perm/sec)   p_kst 7.708333e-04   p_cons 7.486167e-01   p_joint 2.059167e-03

Joint ci ratio: 7.849216e-02	ci left: 1.976267e-03	ci right 2.138528e-03	k: 2488	n:1210000
Cons ci ratio: 2.065007e-03	ci left: 7.478517e-01	ci right 7.493984e-01	k: 905837	n:1210000
KS ci ratio: 1.281481e-01	ci left: 7.232020e-04	ci right 8.230143e-04	k: 934	n:1210000
HAUS8   1210000 perm   774 sec   (1563 perm/sec)   p_kst 7.719008e-04   p_cons 7.486256e-01   p_joint 2.056198e-03

Joint ci ratio: 7.819433e-02	ci left: 1.975336e-03	ci right 2.136878e-03	k: 2507	n:1220000
Cons ci ratio: 2.056465e-03	ci left: 7.478661e-01	ci right 7.494065e-01	k: 913337	n:1220000
KS ci ratio: 1.274682e-01	ci left: 7.252088e-04	ci right 8.247269e-04	k: 944	n:1220000
HAUS8   1220000 perm   785 sec   (1554 perm/sec)   p_kst 7.737705e-04   p_cons 7.486369e-01   p_joint 2.054918e-03

Joint ci ratio: 7.796172e-02	ci left: 1.971234e-03	ci right 2.131939e-03	k: 2522	n:1230000
Cons ci ratio: 2.048143e-03	ci left: 7.478592e-01	ci right 7.493933e-01	k: 920811	n:1230000
KS ci ratio: 1.271994e-01	ci left: 7.224612e-04	ci right 8.213774e-04	k: 948	n:1230000
HAUS8   1230000 perm   796 sec   (1546 perm/sec)   p_kst 7.707317e-04   p_cons 7.486268e-01   p_joint 2.050407e-03

Joint ci ratio: 7.759343e-02	ci left: 1.974315e-03	ci right 2.134477e-03	k: 2546	n:1240000
Cons ci ratio: 2.039952e-03	ci left: 7.478468e-01	ci right 7.493747e-01	k: 928278	n:1240000
KS ci ratio: 1.266666e-01	ci left: 7.228816e-04	ci right 8.214098e-04	k: 956	n:1240000
HAUS8   1240000 perm   807 sec   (1537 perm/sec)   p_kst 7.709677e-04   p_cons 7.486113e-01   p_joint 2.053226e-03

Joint ci ratio: 7.726043e-02	ci left: 1.975780e-03	ci right 2.135342e-03	k: 2568	n:1250000
Cons ci ratio: 2.031823e-03	ci left: 7.478409e-01	ci right 7.493627e-01	k: 935753	n:1250000
KS ci ratio: 1.263372e-01	ci left: 7.209720e-04	ci right 8.189651e-04	k: 961	n:1250000
HAUS8   1250000 perm   818 sec   (1528 perm/sec)   p_kst 7.688000e-04   p_cons 7.486024e-01   p_joint 2.054400e-03

Joint ci ratio: 7.703602e-02	ci left: 1.971774e-03	ci right 2.130529e-03	k: 2583	n:1260000
Cons ci ratio: 2.023864e-03	ci left: 7.478217e-01	ci right 7.493375e-01	k: 943211	n:1260000
KS ci ratio: 1.260755e-01	ci left: 7.183243e-04	ci right 8.157402e-04	k: 965	n:1260000
HAUS8   1260000 perm   829 sec   (1520 perm/sec)   p_kst 7.658730e-04   p_cons 7.485802e-01   p_joint 2.050000e-03

Joint ci ratio: 7.679876e-02	ci left: 1.968604e-03	ci right 2.126594e-03	k: 2599	n:1270000
Cons ci ratio: 2.015892e-03	ci left: 7.478225e-01	ci right 7.493323e-01	k: 950694	n:1270000
KS ci ratio: 1.256859e-01	ci left: 7.172438e-04	ci right 8.141902e-04	k: 971	n:1270000
HAUS8   1270000 perm   840 sec   (1512 perm/sec)   p_kst 7.645669e-04   p_cons 7.485780e-01   p_joint 2.046457e-03

Joint ci ratio: 7.657834e-02	ci left: 1.964718e-03	ci right 2.121924e-03	k: 2614	n:1280000
Cons ci ratio: 2.008201e-03	ci left: 7.477881e-01	ci right 7.492920e-01	k: 958132	n:1280000
KS ci ratio: 1.254282e-01	ci left: 7.146671e-04	ci right 8.110525e-04	k: 975	n:1280000
HAUS8   1280000 perm   851 sec   (1504 perm/sec)   p_kst 7.617188e-04   p_cons 7.485406e-01   p_joint 2.042188e-03

Joint ci ratio: 7.633074e-02	ci left: 1.962414e-03	ci right 2.118905e-03	k: 2631	n:1290000
Cons ci ratio: 2.000421e-03	ci left: 7.477876e-01	ci right 7.492857e-01	k: 965613	n:1290000
KS ci ratio: 1.251722e-01	ci left: 7.121306e-04	ci right 8.079633e-04	k: 979	n:1290000
HAUS8   1290000 perm   862 sec   (1496 perm/sec)   p_kst 7.589147e-04   p_cons 7.485372e-01   p_joint 2.039535e-03

Joint ci ratio: 7.609991e-02	ci left: 1.959392e-03	ci right 2.115148e-03	k: 2647	n:1300000
Cons ci ratio: 1.993019e-03	ci left: 7.477324e-01	ci right 7.492249e-01	k: 973023	n:1300000
KS ci ratio: 1.249177e-01	ci left: 7.096333e-04	ci right 8.049213e-04	k: 983	n:1300000
HAUS8   1300000 perm   874 sec   (1488 perm/sec)   p_kst 7.561538e-04   p_cons 7.484792e-01   p_joint 2.036154e-03

Joint ci ratio: 7.574307e-02	ci left: 1.963156e-03	ci right 2.118448e-03	k: 2672	n:1310000
Cons ci ratio: 1.985239e-03	ci left: 7.477653e-01	ci right 7.492520e-01	k: 980547	n:1310000
KS ci ratio: 1.243502e-01	ci left: 7.108723e-04	ci right 8.058612e-04	k: 992	n:1310000
HAUS8   1310000 perm   885 sec   (1480 perm/sec)   p_kst 7.572519e-04   p_cons 7.485092e-01   p_joint 2.039695e-03

Joint ci ratio: 7.547534e-02	ci left: 1.962406e-03	ci right 2.117065e-03	k: 2691	n:1320000
Cons ci ratio: 1.977992e-03	ci left: 7.477134e-01	ci right 7.491946e-01	k: 987960	n:1320000
KS ci ratio: 1.238523e-01	ci left: 7.113594e-04	ci right 8.060048e-04	k: 1000	n:1320000
HAUS8   1320000 perm   897 sec   (1472 perm/sec)   p_kst 7.575758e-04   p_cons 7.484545e-01   p_joint 2.038636e-03

Joint ci ratio: 7.521043e-02	ci left: 1.961667e-03	ci right 2.115702e-03	k: 2710	n:1330000
Cons ci ratio: 1.970430e-03	ci left: 7.477376e-01	ci right 7.492132e-01	k: 995473	n:1330000
KS ci ratio: 1.232992e-01	ci left: 7.125686e-04	ci right 8.069206e-04	k: 1009	n:1330000
HAUS8   1330000 perm   908 sec   (1464 perm/sec)   p_kst 7.586466e-04   p_cons 7.484759e-01   p_joint 2.037594e-03

Joint ci ratio: 7.494829e-02	ci left: 1.960941e-03	ci right 2.114359e-03	k: 2729	n:1340000
Cons ci ratio: 1.963145e-03	ci left: 7.477249e-01	ci right 7.491949e-01	k: 1002937	n:1340000
KS ci ratio: 1.225730e-01	ci left: 7.159308e-04	ci right 8.101292e-04	k: 1021	n:1340000
HAUS8   1340000 perm   920 sec   (1457 perm/sec)   p_kst 7.619403e-04   p_cons 7.484604e-01   p_joint 2.036567e-03

Joint ci ratio: 7.468887e-02	ci left: 1.960226e-03	ci right 2.113034e-03	k: 2748	n:1350000
Cons ci ratio: 1.955913e-03	ci left: 7.477175e-01	ci right 7.491821e-01	k: 1010408	n:1350000
KS ci ratio: 1.221554e-01	ci left: 7.156541e-04	ci right 8.094721e-04	k: 1028	n:1350000
HAUS8   1350000 perm   932 sec   (1449 perm/sec)   p_kst 7.614815e-04   p_cons 7.484504e-01   p_joint 2.035556e-03

Joint ci ratio: 5.290016e-02	ci left: 3.914925e-03	ci right 4.128372e-03	k: 5468	n:1360000
Cons ci ratio: 1.948543e-03	ci left: 7.477522e-01	ci right 7.492114e-01	k: 1017936	n:1360000
KS ci ratio: 1.212743e-01	ci left: 7.210857e-04	ci right 8.148850e-04	k: 1043	n:1360000
HAUS8   1360000 perm   943 sec   (1442 perm/sec)   p_kst 7.669118e-04   p_cons 7.484824e-01   p_joint 4.020588e-03

Joint ci ratio: 7.413805e-02	ci left: 1.960980e-03	ci right 2.112670e-03	k: 2789	n:1370000
Cons ci ratio: 1.941384e-03	ci left: 7.477616e-01	ci right 7.492154e-01	k: 1025430	n:1370000
KS ci ratio: 1.209274e-01	ci left: 7.200691e-04	ci right 8.134491e-04	k: 1049	n:1370000
HAUS8   1370000 perm   955 sec   (1434 perm/sec)   p_kst 7.656934e-04   p_cons 7.484891e-01   p_joint 2.035766e-03

Joint ci ratio: 5.279520e-02	ci left: 3.873916e-03	ci right 4.084695e-03	k: 5490	n:1380000
Cons ci ratio: 1.934069e-03	ci left: 7.478166e-01	ci right 7.492650e-01	k: 1032987	n:1380000
KS ci ratio: 1.206406e-01	ci left: 7.183649e-04	ci right 8.112872e-04	k: 1054	n:1380000
HAUS8   1380000 perm   967 sec   (1427 perm/sec)   p_kst 7.637681e-04   p_cons 7.485413e-01   p_joint 3.978261e-03

Joint ci ratio: 7.362529e-02	ci left: 1.960303e-03	ci right 2.110848e-03	k: 2828	n:1390000
Cons ci ratio: 1.927097e-03	ci left: 7.478196e-01	ci right 7.492628e-01	k: 1040473	n:1390000
KS ci ratio: 1.201858e-01	ci left: 7.187789e-04	ci right 8.113792e-04	k: 1062	n:1390000
HAUS8   1390000 perm   979 sec   (1419 perm/sec)   p_kst 7.640288e-04   p_cons 7.485417e-01   p_joint 2.034532e-03

Joint ci ratio: 5.241475e-02	ci left: 3.874966e-03	ci right 4.084237e-03	k: 5570	n:1400000
Cons ci ratio: 1.920255e-03	ci left: 7.478119e-01	ci right 7.492499e-01	k: 1047944	n:1400000
KS ci ratio: 1.192357e-01	ci left: 7.254241e-04	ci right 8.180898e-04	k: 1079	n:1400000
HAUS8   1400000 perm   991 sec   (1412 perm/sec)   p_kst 7.707143e-04   p_cons 7.485314e-01   p_joint 3.978571e-03

Joint ci ratio: 7.300834e-02	ci left: 1.965916e-03	ci right 2.115573e-03	k: 2876	n:1410000
Cons ci ratio: 1.913539e-03	ci left: 7.477936e-01	ci right 7.492266e-01	k: 1055400	n:1410000
KS ci ratio: 1.186874e-01	ci left: 7.271605e-04	ci right 8.195908e-04	k: 1089	n:1410000
HAUS8   1410000 perm   1004 sec   (1405 perm/sec)   p_kst 7.723404e-04   p_cons 7.485106e-01   p_joint 2.039716e-03

Joint ci ratio: 5.174902e-02	ci left: 3.920479e-03	ci right 4.129439e-03	k: 5714	n:1420000
Cons ci ratio: 1.906914e-03	ci left: 7.477714e-01	ci right 7.491994e-01	k: 1062850	n:1420000
KS ci ratio: 1.179857e-01	ci left: 7.309237e-04	ci right 8.232448e-04	k: 1102	n:1420000
HAUS8   1420000 perm   1016 sec   (1398 perm/sec)   p_kst 7.760563e-04   p_cons 7.484859e-01   p_joint 4.023944e-03

Joint ci ratio: 5.152843e-02	ci left: 3.926887e-03	ci right 4.135269e-03	k: 5763	n:1430000
Cons ci ratio: 1.900185e-03	ci left: 7.477838e-01	ci right 7.492068e-01	k: 1070349	n:1430000
KS ci ratio: 1.173489e-01	ci left: 7.339570e-04	ci right 8.261262e-04	k: 1114	n:1430000
HAUS8   1430000 perm   1028 sec   (1391 perm/sec)   p_kst 7.790210e-04   p_cons 7.484958e-01   p_joint 4.030070e-03

Joint ci ratio: 5.135501e-02	ci left: 3.926352e-03	ci right 4.133984e-03	k: 5802	n:1440000
Cons ci ratio: 1.893558e-03	ci left: 7.477898e-01	ci right 7.492078e-01	k: 1077839	n:1440000
KS ci ratio: 1.169302e-01	ci left: 7.342529e-04	ci right 8.261075e-04	k: 1122	n:1440000
HAUS8   1440000 perm   1040 sec   (1384 perm/sec)   p_kst 7.791667e-04   p_cons 7.484993e-01   p_joint 4.029167e-03

Joint ci ratio: 5.114817e-02	ci left: 3.931272e-03	ci right 4.138303e-03	k: 5849	n:1450000
Cons ci ratio: 1.886889e-03	ci left: 7.478178e-01	ci right 7.492309e-01	k: 1085361	n:1450000
KS ci ratio: 1.165675e-01	ci left: 7.338757e-04	ci right 8.253787e-04	k: 1129	n:1450000
HAUS8   1450000 perm   1053 sec   (1377 perm/sec)   p_kst 7.786207e-04   p_cons 7.485248e-01   p_joint 4.033793e-03

Joint ci ratio: 5.096986e-02	ci left: 3.932070e-03	ci right 4.138399e-03	k: 5890	n:1460000
Cons ci ratio: 1.880291e-03	ci left: 7.478454e-01	ci right 7.492536e-01	k: 1092883	n:1460000
KS ci ratio: 1.159533e-01	ci left: 7.368293e-04	ci right 8.281834e-04	k: 1141	n:1460000
HAUS8   1460000 perm   1066 sec   (1370 perm/sec)   p_kst 7.815068e-04   p_cons 7.485500e-01   p_joint 4.034247e-03

Joint ci ratio: 5.075047e-02	ci left: 3.939574e-03	ci right 4.145381e-03	k: 5941	n:1470000
Cons ci ratio: 1.873629e-03	ci left: 7.478992e-01	ci right 7.493025e-01	k: 1100444	n:1470000
KS ci ratio: 1.155995e-01	ci left: 7.364409e-04	ci right 8.274493e-04	k: 1148	n:1470000
HAUS8   1470000 perm   1079 sec   (1363 perm/sec)   p_kst 7.809524e-04   p_cons 7.486014e-01   p_joint 4.041497e-03

Joint ci ratio: 5.059326e-02	ci left: 3.937638e-03	ci right 4.142688e-03	k: 5978	n:1480000
Cons ci ratio: 1.867322e-03	ci left: 7.478949e-01	ci right 7.492934e-01	k: 1107920	n:1480000
KS ci ratio: 1.150997e-01	ci left: 7.380268e-04	ci right 8.288100e-04	k: 1158	n:1480000
HAUS8   1480000 perm   1092 sec   (1356 perm/sec)   p_kst 7.824324e-04   p_cons 7.485946e-01   p_joint 4.039189e-03

Joint ci ratio: 5.042066e-02	ci left: 3.938380e-03	ci right 4.142749e-03	k: 6019	n:1490000
Cons ci ratio: 1.860895e-03	ci left: 7.479275e-01	ci right 7.493212e-01	k: 1115451	n:1490000
KS ci ratio: 1.147045e-01	ci left: 7.382884e-04	ci right 8.287709e-04	k: 1166	n:1490000
HAUS8   1490000 perm   1104 sec   (1349 perm/sec)   p_kst 7.825503e-04   p_cons 7.486248e-01   p_joint 4.039597e-03

Joint ci ratio: 5.024983e-02	ci left: 3.939114e-03	ci right 4.142808e-03	k: 6060	n:1500000
Cons ci ratio: 1.854801e-03	ci left: 7.479056e-01	ci right 7.492948e-01	k: 1122901	n:1500000
KS ci ratio: 1.141675e-01	ci left: 7.404900e-04	ci right 8.307888e-04	k: 1177	n:1500000
HAUS8   1500000 perm   1117 sec   (1343 perm/sec)   p_kst 7.846667e-04   p_cons 7.486007e-01   p_joint 4.040000e-03

Joint ci ratio: 5.008484e-02	ci left: 3.939185e-03	ci right 4.142195e-03	k: 6100	n:1510000
Cons ci ratio: 1.848750e-03	ci left: 7.478874e-01	ci right 7.492719e-01	k: 1130356	n:1510000
KS ci ratio: 1.139744e-01	ci left: 7.381594e-04	ci right 8.280115e-04	k: 1181	n:1510000
HAUS8   1510000 perm   1130 sec   (1336 perm/sec)   p_kst 7.821192e-04   p_cons 7.485801e-01   p_joint 4.039735e-03

Joint ci ratio: 6.898622e-02	ci left: 2.046596e-03	ci right 2.193469e-03	k: 3221	n:1520000
Cons ci ratio: 1.842787e-03	ci left: 7.478634e-01	ci right 7.492435e-01	k: 1137802	n:1520000
KS ci ratio: 1.135906e-01	ci left: 7.384165e-04	ci right 8.279770e-04	k: 1189	n:1520000
HAUS8   1520000 perm   1143 sec   (1330 perm/sec)   p_kst 7.822368e-04   p_cons 7.485539e-01   p_joint 2.119079e-03

Joint ci ratio: 6.882634e-02	ci left: 2.042855e-03	ci right 2.189105e-03	k: 3236	n:1530000
Cons ci ratio: 1.836811e-03	ci left: 7.478542e-01	ci right 7.492298e-01	k: 1145270	n:1530000
KS ci ratio: 1.133528e-01	ci left: 7.367654e-04	ci right 8.259261e-04	k: 1194	n:1530000
HAUS8   1530000 perm   1156 sec   (1324 perm/sec)   p_kst 7.803922e-04   p_cons 7.485425e-01   p_joint 2.115033e-03

Joint ci ratio: 6.860417e-02	ci left: 2.042992e-03	ci right 2.188761e-03	k: 3257	n:1540000
Cons ci ratio: 1.830624e-03	ci left: 7.479004e-01	ci right 7.492714e-01	k: 1152823	n:1540000
KS ci ratio: 1.129753e-01	ci left: 7.370290e-04	ci right 8.259047e-04	k: 1202	n:1540000
HAUS8   1540000 perm   1169 sec   (1318 perm/sec)   p_kst 7.805195e-04   p_cons 7.485864e-01   p_joint 2.114935e-03

Joint ci ratio: 6.954135e-02	ci left: 1.974649e-03	ci right 2.117544e-03	k: 3170	n:1550000
Cons ci ratio: 1.824693e-03	ci left: 7.479059e-01	ci right 7.492725e-01	k: 1160314	n:1550000
KS ci ratio: 1.126015e-01	ci left: 7.372897e-04	ci right 8.258831e-04	k: 1210	n:1550000
HAUS8   1550000 perm   1182 sec   (1311 perm/sec)   p_kst 7.806452e-04   p_cons 7.485897e-01   p_joint 2.045161e-03

Joint ci ratio: 6.930133e-02	ci left: 1.975849e-03	ci right 2.118318e-03	k: 3192	n:1560000
Cons ci ratio: 1.819058e-03	ci left: 7.478620e-01	ci right 7.492243e-01	k: 1167728	n:1560000
KS ci ratio: 1.123699e-01	ci left: 7.356784e-04	ci right 8.238843e-04	k: 1215	n:1560000
HAUS8   1560000 perm   1195 sec   (1305 perm/sec)   p_kst 7.788462e-04   p_cons 7.485436e-01   p_joint 2.046154e-03

Joint ci ratio: 6.906378e-02	ci left: 1.977034e-03	ci right 2.119080e-03	k: 3214	n:1570000
Cons ci ratio: 1.813103e-03	ci left: 7.478958e-01	ci right 7.492536e-01	k: 1175263	n:1570000
KS ci ratio: 1.121396e-01	ci left: 7.340878e-04	ci right 8.219108e-04	k: 1220	n:1570000
HAUS8   1570000 perm   1209 sec   (1299 perm/sec)   p_kst 7.770701e-04   p_cons 7.485752e-01   p_joint 2.047134e-03

Joint ci ratio: 6.873297e-02	ci left: 1.983804e-03	ci right 2.125626e-03	k: 3245	n:1580000
Cons ci ratio: 1.807356e-03	ci left: 7.478981e-01	ci right 7.492516e-01	k: 1182749	n:1580000
KS ci ratio: 1.117741e-01	ci left: 7.343632e-04	ci right 8.219138e-04	k: 1228	n:1580000
HAUS8   1580000 perm   1222 sec   (1293 perm/sec)   p_kst 7.772152e-04   p_cons 7.485753e-01   p_joint 2.053797e-03

Joint ci ratio: 6.852221e-02	ci left: 1.983690e-03	ci right 2.125052e-03	k: 3265	n:1590000
Cons ci ratio: 1.801509e-03	ci left: 7.479325e-01	ci right 7.492817e-01	k: 1190286	n:1590000
KS ci ratio: 1.114120e-01	ci left: 7.346356e-04	ci right 8.219163e-04	k: 1236	n:1590000
HAUS8   1590000 perm   1235 sec   (1287 perm/sec)   p_kst 7.773585e-04   p_cons 7.486075e-01   p_joint 2.053459e-03

Joint ci ratio: 6.826135e-02	ci left: 1.986650e-03	ci right 2.127663e-03	k: 3290	n:1600000
Cons ci ratio: 1.795987e-03	ci left: 7.479102e-01	ci right 7.492552e-01	k: 1197733	n:1600000
KS ci ratio: 1.110089e-01	ci left: 7.355126e-04	ci right 8.225607e-04	k: 1245	n:1600000
HAUS8   1600000 perm   1249 sec   (1281 perm/sec)   p_kst 7.781250e-04   p_cons 7.485831e-01   p_joint 2.056250e-03

Joint ci ratio: 6.795214e-02	ci left: 1.992627e-03	ci right 2.133398e-03	k: 3320	n:1610000
Cons ci ratio: 1.790560e-03	ci left: 7.478788e-01	ci right 7.492197e-01	k: 1205165	n:1610000
KS ci ratio: 1.104341e-01	ci left: 7.387952e-04	ci right 8.257497e-04	k: 1258	n:1610000
HAUS8   1610000 perm   1263 sec   (1275 perm/sec)   p_kst 7.813665e-04   p_cons 7.485497e-01   p_joint 2.062112e-03

Joint ci ratio: 6.770785e-02	ci left: 1.994890e-03	ci right 2.135295e-03	k: 3344	n:1620000
Cons ci ratio: 1.784915e-03	ci left: 7.479040e-01	ci right 7.492408e-01	k: 1212688	n:1620000
KS ci ratio: 1.099980e-01	ci left: 7.402375e-04	ci right 8.269953e-04	k: 1268	n:1620000
HAUS8   1620000 perm   1276 sec   (1269 perm/sec)   p_kst 7.827160e-04   p_cons 7.485728e-01   p_joint 2.064198e-03

Joint ci ratio: 6.751641e-02	ci left: 1.994111e-03	ci right 2.134048e-03	k: 3363	n:1630000
Cons ci ratio: 1.779550e-03	ci left: 7.478811e-01	ci right 7.492137e-01	k: 1220133	n:1630000
KS ci ratio: 1.096959e-01	ci left: 7.398726e-04	ci right 8.263342e-04	k: 1275	n:1630000
HAUS8   1630000 perm   1290 sec   (1264 perm/sec)   p_kst 7.822086e-04   p_cons 7.485479e-01   p_joint 2.063190e-03

Joint ci ratio: 6.733655e-02	ci left: 1.992742e-03	ci right 2.132196e-03	k: 3381	n:1640000
Cons ci ratio: 1.774063e-03	ci left: 7.478944e-01	ci right 7.492230e-01	k: 1227637	n:1640000
KS ci ratio: 1.094390e-01	ci left: 7.389195e-04	ci right 8.250543e-04	k: 1281	n:1640000
HAUS8   1640000 perm   1304 sec   (1258 perm/sec)   p_kst 7.810976e-04   p_cons 7.485591e-01   p_joint 2.061585e-03

Joint ci ratio: 6.717793e-02	ci left: 1.990199e-03	ci right 2.129134e-03	k: 3397	n:1650000
Cons ci ratio: 1.768914e-03	ci left: 7.478463e-01	ci right 7.491710e-01	k: 1235040	n:1650000
KS ci ratio: 1.090991e-01	ci left: 7.391571e-04	ci right 8.250349e-04	k: 1289	n:1650000
HAUS8   1650000 perm   1318 sec   (1252 perm/sec)   p_kst 7.812121e-04   p_cons 7.485091e-01   p_joint 2.058788e-03

Joint ci ratio: 6.692228e-02	ci left: 1.993610e-03	ci right 2.132233e-03	k: 3423	n:1660000
Cons ci ratio: 1.763617e-03	ci left: 7.478398e-01	ci right 7.491605e-01	k: 1242511	n:1660000
KS ci ratio: 1.085533e-01	ci left: 7.423226e-04	ci right 8.281092e-04	k: 1302	n:1660000
HAUS8   1660000 perm   1332 sec   (1247 perm/sec)   p_kst 7.843373e-04   p_cons 7.485006e-01   p_joint 2.062048e-03

Joint ci ratio: 6.671798e-02	ci left: 1.994037e-03	ci right 2.132250e-03	k: 3444	n:1670000
Cons ci ratio: 1.758100e-03	ci left: 7.478910e-01	ci right 7.492076e-01	k: 1250078	n:1670000
KS ci ratio: 1.082216e-01	ci left: 7.425381e-04	ci right 8.280707e-04	k: 1310	n:1670000
HAUS8   1670000 perm   1346 sec   (1241 perm/sec)   p_kst 7.844311e-04   p_cons 7.485497e-01   p_joint 2.062275e-03

Joint ci ratio: 6.644835e-02	ci left: 1.998557e-03	ci right 2.136502e-03	k: 3472	n:1680000
Cons ci ratio: 1.752595e-03	ci left: 7.479498e-01	ci right 7.492624e-01	k: 1257659	n:1680000
KS ci ratio: 1.078520e-01	ci left: 7.433307e-04	ci right 8.286435e-04	k: 1319	n:1680000
HAUS8   1680000 perm   1360 sec   (1235 perm/sec)   p_kst 7.851190e-04   p_cons 7.486065e-01   p_joint 2.066667e-03

Joint ci ratio: 6.611575e-02	ci left: 2.007098e-03	ci right 2.144913e-03	k: 3507	n:1690000
Cons ci ratio: 1.747309e-03	ci left: 7.479719e-01	ci right 7.492805e-01	k: 1265179	n:1690000
KS ci ratio: 1.074862e-01	ci left: 7.441143e-04	ci right 8.292091e-04	k: 1328	n:1690000
HAUS8   1690000 perm   1374 sec   (1230 perm/sec)   p_kst 7.857988e-04   p_cons 7.486266e-01   p_joint 2.075148e-03

Joint ci ratio: 6.594683e-02	ci left: 2.005705e-03	ci right 2.143059e-03	k: 3525	n:1700000
Cons ci ratio: 1.742046e-03	ci left: 7.479990e-01	ci right 7.493037e-01	k: 1272708	n:1700000
KS ci ratio: 1.071641e-01	ci left: 7.443167e-04	ci right 8.291635e-04	k: 1336	n:1700000
HAUS8   1700000 perm   1389 sec   (1224 perm/sec)   p_kst 7.858824e-04   p_cons 7.486518e-01   p_joint 2.073529e-03

Joint ci ratio: 6.581643e-02	ci left: 2.002028e-03	ci right 2.138849e-03	k: 3539	n:1710000
Cons ci ratio: 1.736914e-03	ci left: 7.480076e-01	ci right 7.493085e-01	k: 1280206	n:1710000
KS ci ratio: 1.070842e-01	ci left: 7.411022e-04	ci right 8.255156e-04	k: 1338	n:1710000
HAUS8   1710000 perm   1403 sec   (1219 perm/sec)   p_kst 7.824561e-04   p_cons 7.486585e-01   p_joint 2.069591e-03

Joint ci ratio: 6.562207e-02	ci left: 2.002397e-03	ci right 2.138823e-03	k: 3560	n:1720000
Cons ci ratio: 1.731987e-03	ci left: 7.479812e-01	ci right 7.492784e-01	k: 1287644	n:1720000
KS ci ratio: 1.066075e-01	ci left: 7.435838e-04	ci right 8.278791e-04	k: 1350	n:1720000
HAUS8   1720000 perm   1418 sec   (1213 perm/sec)   p_kst 7.848837e-04   p_cons 7.486302e-01   p_joint 2.069767e-03

Joint ci ratio: 6.541112e-02	ci left: 2.003899e-03	ci right 2.139973e-03	k: 3583	n:1730000
Cons ci ratio: 1.726916e-03	ci left: 7.479957e-01	ci right 7.492891e-01	k: 1295152	n:1730000
KS ci ratio: 1.063716e-01	ci left: 7.426615e-04	ci right 8.266543e-04	k: 1356	n:1730000
HAUS8   1730000 perm   1433 sec   (1208 perm/sec)   p_kst 7.838150e-04   p_cons 7.486428e-01   p_joint 2.071098e-03

Joint ci ratio: 6.518410e-02	ci left: 2.006516e-03	ci right 2.142276e-03	k: 3608	n:1740000
Cons ci ratio: 1.722019e-03	ci left: 7.479817e-01	ci right 7.492714e-01	k: 1302611	n:1740000
KS ci ratio: 1.061373e-01	ci left: 7.417499e-04	ci right 8.254433e-04	k: 1362	n:1740000
HAUS8   1740000 perm   1447 sec   (1202 perm/sec)   p_kst 7.827586e-04   p_cons 7.486270e-01   p_joint 2.073563e-03

Joint ci ratio: 6.502220e-02	ci left: 2.005168e-03	ci right 2.140488e-03	k: 3626	n:1750000
Cons ci ratio: 1.716819e-03	ci left: 7.480435e-01	ci right 7.493294e-01	k: 1310202	n:1750000
KS ci ratio: 1.057500e-01	ci left: 7.430742e-04	ci right 8.265921e-04	k: 1372	n:1750000
HAUS8   1750000 perm   1462 sec   (1197 perm/sec)   p_kst 7.840000e-04   p_cons 7.486869e-01   p_joint 2.072000e-03

Joint ci ratio: 6.493294e-02	ci left: 1.999365e-03	ci right 2.134100e-03	k: 3636	n:1760000
Cons ci ratio: 1.712113e-03	ci left: 7.480062e-01	ci right 7.492885e-01	k: 1317620	n:1760000
KS ci ratio: 1.056732e-01	ci left: 7.399585e-04	ci right 8.230620e-04	k: 1374	n:1760000
HAUS8   1760000 perm   1477 sec   (1192 perm/sec)   p_kst 7.806818e-04   p_cons 7.486477e-01   p_joint 2.065909e-03

Joint ci ratio: 6.474629e-02	ci left: 1.999741e-03	ci right 2.134100e-03	k: 3657	n:1770000
Cons ci ratio: 1.706945e-03	ci left: 7.480795e-01	ci right 7.493581e-01	k: 1325233	n:1770000
KS ci ratio: 1.053290e-01	ci left: 7.407285e-04	ci right 8.236308e-04	k: 1383	n:1770000
HAUS8   1770000 perm   1491 sec   (1187 perm/sec)   p_kst 7.813559e-04   p_cons 7.487192e-01   p_joint 2.066102e-03

Joint ci ratio: 6.459643e-02	ci left: 1.997902e-03	ci right 2.131816e-03	k: 3674	n:1780000
Cons ci ratio: 1.702124e-03	ci left: 7.480857e-01	ci right 7.493607e-01	k: 1332728	n:1780000
KS ci ratio: 1.049128e-01	ci left: 7.425845e-04	ci right 8.253458e-04	k: 1394	n:1780000
HAUS8   1780000 perm   1506 sec   (1182 perm/sec)   p_kst 7.831461e-04   p_cons 7.487236e-01   p_joint 2.064045e-03

Joint ci ratio: 6.443012e-02	ci left: 1.997184e-03	ci right 2.130692e-03	k: 3693	n:1790000
Cons ci ratio: 1.697267e-03	ci left: 7.481086e-01	ci right 7.493800e-01	k: 1340253	n:1790000
KS ci ratio: 1.045760e-01	ci left: 7.433322e-04	ci right 8.258945e-04	k: 1403	n:1790000
HAUS8   1790000 perm   1521 sec   (1177 perm/sec)   p_kst 7.837989e-04   p_cons 7.487447e-01   p_joint 2.063128e-03

Joint ci ratio: 6.432587e-02	ci left: 1.992648e-03	ci right 2.125629e-03	k: 3705	n:1800000
Cons ci ratio: 1.692617e-03	ci left: 7.480946e-01	ci right 7.493624e-01	k: 1347712	n:1800000
KS ci ratio: 1.044275e-01	ci left: 7.413667e-04	ci right 8.235866e-04	k: 1407	n:1800000
HAUS8   1800000 perm   1537 sec   (1171 perm/sec)   p_kst 7.816667e-04   p_cons 7.487289e-01   p_joint 2.058333e-03

Joint ci ratio: 6.415301e-02	ci left: 1.992511e-03	ci right 2.125112e-03	k: 3725	n:1810000
Cons ci ratio: 1.688015e-03	ci left: 7.480785e-01	ci right 7.493428e-01	k: 1355167	n:1810000
KS ci ratio: 1.041689e-01	ci left: 7.410372e-04	ci right 8.230046e-04	k: 1414	n:1810000
HAUS8   1810000 perm   1552 sec   (1166 perm/sec)   p_kst 7.812155e-04   p_cons 7.487110e-01   p_joint 2.058011e-03

Joint ci ratio: 6.403294e-02	ci left: 1.989132e-03	ci right 2.121251e-03	k: 3739	n:1820000
Cons ci ratio: 1.683263e-03	ci left: 7.481043e-01	ci right 7.493652e-01	k: 1362698	n:1820000
KS ci ratio: 1.040220e-01	ci left: 7.391061e-04	ci right 8.207377e-04	k: 1418	n:1820000
HAUS8   1820000 perm   1568 sec   (1161 perm/sec)   p_kst 7.791209e-04   p_cons 7.487352e-01   p_joint 2.054396e-03

Joint ci ratio: 6.386243e-02	ci left: 1.989017e-03	ci right 2.120764e-03	k: 3759	n:1830000
Cons ci ratio: 1.678571e-03	ci left: 7.481256e-01	ci right 7.493829e-01	k: 1370221	n:1830000
KS ci ratio: 1.036937e-01	ci left: 7.398576e-04	ci right 8.212985e-04	k: 1427	n:1830000
HAUS8   1830000 perm   1583 sec   (1156 perm/sec)   p_kst 7.797814e-04   p_cons 7.487546e-01   p_joint 2.054098e-03

Joint ci ratio: 6.371860e-02	ci left: 1.987299e-03	ci right 2.118624e-03	k: 3776	n:1840000
Cons ci ratio: 1.674063e-03	ci left: 7.481139e-01	ci right 7.493679e-01	k: 1377684	n:1840000
KS ci ratio: 1.034405e-01	ci left: 7.395424e-04	ci right 8.207378e-04	k: 1434	n:1840000
HAUS8   1840000 perm   1599 sec   (1150 perm/sec)   p_kst 7.793478e-04   p_cons 7.487413e-01   p_joint 2.052174e-03

Joint ci ratio: 6.355897e-02	ci left: 1.986663e-03	ci right 2.117606e-03	k: 3795	n:1850000
Cons ci ratio: 1.669632e-03	ci left: 7.480932e-01	ci right 7.493438e-01	k: 1385130	n:1850000
KS ci ratio: 1.029750e-01	ci left: 7.423906e-04	ci right 8.235096e-04	k: 1447	n:1850000
HAUS8   1850000 perm   1615 sec   (1145 perm/sec)   p_kst 7.821622e-04   p_cons 7.487189e-01   p_joint 2.051351e-03

Joint ci ratio: 6.341718e-02	ci left: 1.984977e-03	ci right 2.115506e-03	k: 3812	n:1860000
Cons ci ratio: 1.664978e-03	ci left: 7.481309e-01	ci right 7.493780e-01	k: 1392684	n:1860000
KS ci ratio: 1.027270e-01	ci left: 7.420659e-04	ci right 8.229424e-04	k: 1454	n:1860000
HAUS8   1860000 perm   1632 sec   (1140 perm/sec)   p_kst 7.817204e-04   p_cons 7.487548e-01   p_joint 2.049462e-03

Joint ci ratio: 6.323499e-02	ci left: 1.985941e-03	ci right 2.116144e-03	k: 3834	n:1870000
Cons ci ratio: 1.660333e-03	ci left: 7.481751e-01	ci right 7.494188e-01	k: 1400251	n:1870000
KS ci ratio: 1.024457e-01	ci left: 7.422659e-04	ci right 8.229294e-04	k: 1462	n:1870000
HAUS8   1870000 perm   1647 sec   (1135 perm/sec)   p_kst 7.818182e-04   p_cons 7.487973e-01   p_joint 2.050267e-03

Joint ci ratio: 6.310357e-02	ci left: 1.983753e-03	ci right 2.113533e-03	k: 3850	n:1880000
Cons ci ratio: 1.655996e-03	ci left: 7.481576e-01	ci right 7.493980e-01	k: 1407703	n:1880000
KS ci ratio: 1.022015e-01	ci left: 7.419458e-04	ci right 8.223708e-04	k: 1469	n:1880000
HAUS8   1880000 perm   1663 sec   (1131 perm/sec)   p_kst 7.813830e-04   p_cons 7.487782e-01   p_joint 2.047872e-03

Joint ci ratio: 6.294035e-02	ci left: 1.983672e-03	ci right 2.113099e-03	k: 3870	n:1890000
Cons ci ratio: 1.651580e-03	ci left: 7.481657e-01	ci right 7.494029e-01	k: 1415203	n:1890000
KS ci ratio: 1.019246e-01	ci left: 7.421449e-04	ci right 8.223604e-04	k: 1477	n:1890000
HAUS8   1890000 perm   1679 sec   (1126 perm/sec)   p_kst 7.814815e-04   p_cons 7.487847e-01   p_joint 2.047619e-03

Joint ci ratio: 6.279457e-02	ci left: 1.982557e-03	ci right 2.111600e-03	k: 3888	n:1900000
Cons ci ratio: 1.647159e-03	ci left: 7.481832e-01	ci right 7.494171e-01	k: 1422721	n:1900000
KS ci ratio: 1.017184e-01	ci left: 7.413164e-04	ci right 8.212705e-04	k: 1483	n:1900000
HAUS8   1900000 perm   1694 sec   (1122 perm/sec)   p_kst 7.805263e-04   p_cons 7.488005e-01   p_joint 2.046316e-03

Joint ci ratio: 6.260966e-02	ci left: 1.984030e-03	ci right 2.112775e-03	k: 3911	n:1910000
Cons ci ratio: 1.642887e-03	ci left: 7.481743e-01	ci right 7.494050e-01	k: 1430189	n:1910000
KS ci ratio: 1.014793e-01	ci left: 7.410069e-04	ci right 8.207287e-04	k: 1490	n:1910000
HAUS8   1910000 perm   1710 sec   (1117 perm/sec)   p_kst 7.801047e-04   p_cons 7.487901e-01   p_joint 2.047644e-03

Joint ci ratio: 6.243432e-02	ci left: 1.984976e-03	ci right 2.113409e-03	k: 3933	n:1920000
Cons ci ratio: 1.638696e-03	ci left: 7.481546e-01	ci right 7.493821e-01	k: 1437636	n:1920000
KS ci ratio: 1.011744e-01	ci left: 7.417163e-04	ci right 8.212603e-04	k: 1499	n:1920000
HAUS8   1920000 perm   1726 sec   (1112 perm/sec)   p_kst 7.807292e-04   p_cons 7.487687e-01   p_joint 2.048437e-03

Joint ci ratio: 6.233945e-02	ci left: 1.980811e-03	ci right 2.108773e-03	k: 3945	n:1930000
Cons ci ratio: 1.634350e-03	ci left: 7.481782e-01	ci right 7.494024e-01	k: 1445166	n:1930000
KS ci ratio: 1.010399e-01	ci left: 7.398933e-04	ci right 8.191300e-04	k: 1503	n:1930000
HAUS8   1930000 perm   1742 sec   (1108 perm/sec)   p_kst 7.787565e-04   p_cons 7.487907e-01   p_joint 2.044041e-03

Joint ci ratio: 6.217422e-02	ci left: 1.981257e-03	ci right 2.108896e-03	k: 3966	n:1940000
Cons ci ratio: 1.630177e-03	ci left: 7.481695e-01	ci right 7.493906e-01	k: 1452634	n:1940000
KS ci ratio: 1.008056e-01	ci left: 7.395965e-04	ci right 8.186070e-04	k: 1510	n:1940000
HAUS8   1940000 perm   1758 sec   (1104 perm/sec)   p_kst 7.783505e-04   p_cons 7.487804e-01   p_joint 2.044330e-03

Joint ci ratio: 6.199472e-02	ci left: 1.982709e-03	ci right 2.110059e-03	k: 3989	n:1950000
Cons ci ratio: 1.626093e-03	ci left: 7.481475e-01	ci right 7.493656e-01	k: 1460076	n:1950000
KS ci ratio: 1.003746e-01	ci left: 7.423027e-04	ci right 8.212433e-04	k: 1523	n:1950000
HAUS8   1950000 perm   1774 sec   (1099 perm/sec)   p_kst 7.810256e-04   p_cons 7.487569e-01   p_joint 2.045641e-03

Joint ci ratio: 6.181677e-02	ci left: 1.984146e-03	ci right 2.111210e-03	k: 4012	n:1960000
Cons ci ratio: 1.621923e-03	ci left: 7.481529e-01	ci right 7.493678e-01	k: 1467571	n:1960000
KS ci ratio: 1.000795e-01	ci left: 7.429922e-04	ci right 8.217602e-04	k: 1532	n:1960000
HAUS8   1960000 perm   1790 sec   (1095 perm/sec)   p_kst 7.816327e-04   p_cons 7.487607e-01   p_joint 2.046939e-03

Joint ci ratio: 6.169398e-02	ci left: 1.982071e-03	ci right 2.108740e-03	k: 4028	n:1970000
Cons ci ratio: 1.617783e-03	ci left: 7.481587e-01	ci right 7.493705e-01	k: 1475067	n:1970000
KS ci ratio: 9.994925e-02	ci left: 7.412003e-04	ci right 8.196701e-04	k: 1536	n:1970000
HAUS8   1970000 perm   1806 sec   (1091 perm/sec)   p_kst 7.796954e-04   p_cons 7.487650e-01   p_joint 2.044670e-03

Outputting figure to mutsig2_images.part000000000077/HAUS8.2_1277_1970000_0.0007797_0.74876_0.0020447.png
                gene_name: HAUS8
               theta_stop: 0.100 
                    nperm: 1970000 
                     p_ks: 0.00078 
        ci_ks_bounds_left: 0.00074 
       ci_ks_bounds_right: 0.00082 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.75 
     ci_cons_bounds_right: 0.75 
                  p_joint: 0.0020 
     ci_joint_bounds_left: 0.0020 
    ci_joint_bounds_right: 0.0021 

Current progress: 60 percent done.
HBS1L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.210389e-02	ci left: 2.759680e-01	ci right 2.937575e-01	k: 2848	n:10000
Cons ci ratio: 2.510420e-01	ci left: 2.080800e-02	ci right 2.687375e-02	k: 237	n:10000
KS ci ratio: 4.203180e-02	ci left: 4.552854e-01	ci right 4.749349e-01	k: 4651	n:10000
HBS1L   10000 perm   2 sec   (5918 perm/sec)   p_kst 4.651000e-01   p_cons 2.370000e-02   p_joint 2.848000e-01

Joint ci ratio: 1.856779e-02	ci left: 6.837894e-01	ci right 6.966553e-01	k: 13805	n:20000
Cons ci ratio: 1.806525e-01	ci left: 2.091926e-02	ci right 2.512099e-02	k: 459	n:20000
KS ci ratio: 2.980717e-02	ci left: 4.567695e-01	ci right 4.706411e-01	k: 9274	n:20000
HBS1L   20000 perm   4 sec   (5298 perm/sec)   p_kst 4.637000e-01   p_cons 2.295000e-02   p_joint 6.902500e-01

Joint ci ratio: 1.259726e-02	ci left: 7.586159e-01	ci right 7.682664e-01	k: 22904	n:30000
Cons ci ratio: 1.481641e-01	ci left: 2.110848e-02	ci right 2.451814e-02	k: 683	n:30000
KS ci ratio: 2.421127e-02	ci left: 4.606418e-01	ci right 4.719648e-01	k: 13989	n:30000
HBS1L   30000 perm   6 sec   (4690 perm/sec)   p_kst 4.663000e-01   p_cons 2.276667e-02   p_joint 7.634667e-01

Joint ci ratio: 1.401106e-02	ci left: 6.571396e-01	ci right 6.664369e-01	k: 26472	n:40000
Cons ci ratio: 1.283143e-01	ci left: 2.133523e-02	ci right 2.428461e-02	k: 911	n:40000
KS ci ratio: 2.097313e-02	ci left: 4.612764e-01	ci right 4.710785e-01	k: 18647	n:40000
HBS1L   40000 perm   9 sec   (4605 perm/sec)   p_kst 4.661750e-01   p_cons 2.277500e-02   p_joint 6.618000e-01

Joint ci ratio: 1.131547e-02	ci left: 7.018844e-01	ci right 7.098917e-01	k: 35295	n:50000
Cons ci ratio: 1.121771e-01	ci left: 2.250111e-02	ci right 2.519456e-02	k: 1191	n:50000
KS ci ratio: 1.864398e-02	ci left: 4.648576e-01	ci right 4.736260e-01	k: 23462	n:50000
HBS1L   50000 perm   11 sec   (4523 perm/sec)   p_kst 4.692400e-01   p_cons 2.382000e-02   p_joint 7.059000e-01

Joint ci ratio: 9.473595e-03	ci left: 7.369725e-01	ci right 7.440042e-01	k: 44430	n:60000
Cons ci ratio: 1.017279e-01	ci left: 2.292012e-02	ci right 2.539287e-02	k: 1448	n:60000
KS ci ratio: 1.704893e-02	ci left: 4.643839e-01	ci right 4.723859e-01	k: 28103	n:60000
HBS1L   60000 perm   13 sec   (4460 perm/sec)   p_kst 4.683833e-01   p_cons 2.413333e-02   p_joint 7.405000e-01

Joint ci ratio: 1.024557e-02	ci left: 6.730201e-01	ci right 6.799653e-01	k: 47355	n:70000
Cons ci ratio: 9.462731e-02	ci left: 2.279510e-02	ci right 2.507316e-02	k: 1674	n:70000
KS ci ratio: 1.578650e-02	ci left: 4.646120e-01	ci right 4.720192e-01	k: 32782	n:70000
HBS1L   70000 perm   16 sec   (4399 perm/sec)   p_kst 4.683143e-01   p_cons 2.391429e-02   p_joint 6.765000e-01

Outputting figure to mutsig2_images.part000000000077/HBS1L.2_3600_70000_0.46831_0.023914_0.6765.png
                gene_name: HBS1L
               theta_stop: 0.095 
                    nperm: 70000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.024 
      ci_cons_bounds_left: 0.023 
     ci_cons_bounds_right: 0.025 
                  p_joint: 0.68 
     ci_joint_bounds_left: 0.67 
    ci_joint_bounds_right: 0.68 

Current progress: 80 percent done.
HDAC2
Processing conservation and coverage...
Processing mutations... 
Skipping 2 mutations outside transcript range of this gene.
Fewer than 2 mutations to analyze: skipping this gene...
Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000077
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 77 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1649>
Subject: Job 8704229: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1649>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000078> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:35:36 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000078.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000078.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 78  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000078.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    160.95 sec.
    Max Memory :      5517 MB
    Max Swap   :      8350 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
78
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 78
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 78: processing genes 6967 - 7056
Calculating significance of each gene.
Using projection method.
In gene HEPACAM2 the following bins exceed PROBCAP:
    THCA-DJ-A2PX-TP	categ 5	N = 1472    n = 1	mu =   1.02e-07
6967	HEPACAM2	7.766530e-02
6968	HEPH	1
6969	HEPHL1	1
6970	HEPN1	1
6971	HERC1	7.373496e-01
6972	HERC2	1
6973	HERC3	1
6974	HERC4	1
6975	HERC5	1
6976	HERC6	1
6977	HERPUD1	1
6978	HERPUD2	1
6979	HES1	1
6980	HES3	1
6981	HES4	1
6982	HES5	1
6983	HES6	1
6984	HES7	1
6985	HESX1	1
6986	HEXA	1.641336e-01
6987	HEXB	1
6988	HEXDC	1
6989	HEXIM1	1
6990	HEXIM2	1
6991	HEY1	1
6992	HEY2	5.898389e-02
6993	HEYL	3.763561e-02
6994	HFE	1
6995	HFE2	1
6996	HFM1	1
6997	HGD	1.598680e-01
6998	HGF	1
6999	HGFAC	1
7000/18093 7000	HGS	1
7001	HGSNAT	1
7002	HHAT	1
7003	HHATL	1
7004	HHEX	4.371193e-03
7005	HHIP	1
7006	HHIPL1	1
7007	HHIPL2	1
7008	HHLA2	1.614815e-01
7009	HHLA3	1
7010	HIAT1	1
7011	HIATL1	1
7012	HIBADH	1
7013	HIBCH	1
7014	HIC1	1
7015	HIC2	1
7016	HIF1A	1
7017	HIF1AN	1
7018	HIF3A	1.126239e-03
7019	HIGD1A	1
7020	HIGD1B	1
7021	HIGD1C	1
7022	HIGD2A	1
7023	HINFP	1
7024	HINT1	1
7025	HINT2	1
7026	HINT3	1
7027	HIP1	1
7028	HIP1R	1
7029	HIPK1	4.329220e-01
7030	HIPK2	1
7031	HIPK3	1
7032	HIPK4	1
7033	HIRA	1
7034	HIRIP3	1
7035	HIST1H1A	1
7036	HIST1H1B	1
7037	HIST1H1C	1
7038	HIST1H1D	1
7039	HIST1H1E	1
7040	HIST1H1T	1
7041	HIST1H2AA	1
7042	HIST1H2AB	1
7043	HIST1H2AC	1
7044	HIST1H2AD	1
7045	HIST1H2AE	1
7046	HIST1H2AG	1
7047	HIST1H2AH	1
7048	HIST1H2AI	1
7049	HIST1H2AJ	1
7050	HIST1H2AK	1
7051	HIST1H2AL	1
7052	HIST1H2AM	1
7053	HIST1H2BA	1
7054	HIST1H2BB	1
7055	HIST1H2BC	3.211784e-02
7056	HIST1H2BD	6.545652e-03
Done

Running MutSig 2:
Scatter job 78: processing genes 6967 - 7056
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
HIF3A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.069629e-02	ci left: 4.713638e-01	ci right 4.910472e-01	k: 4812	n:10000
Cons ci ratio: 3.539588e-02	ci left: 5.409873e-01	ci right 5.605831e-01	k: 5508	n:10000
KS ci ratio: 7.074492e-02	ci left: 2.265204e-01	ci right 2.432343e-01	k: 2348	n:10000
HIF3A   10000 perm   2 sec   (5270 perm/sec)   p_kst 2.348000e-01   p_cons 5.508000e-01   p_joint 4.812000e-01

Outputting figure to mutsig2_images.part000000000078/HIF3A.3_2094_10000_0.2348_0.5508_0.4812.png
                gene_name: HIF3A
               theta_stop: 0.071 
                    nperm: 10000 
                     p_ks: 0.23 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.24 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 0.48 
     ci_joint_bounds_left: 0.47 
    ci_joint_bounds_right: 0.49 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000078
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 78 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1710>
Subject: Job 8704230: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1710>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000079> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:35:45 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000079.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000079.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 79  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000079.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    171.05 sec.
    Max Memory :      5750 MB
    Max Swap   :      8454 MB

    Max Processes  :         7
    Max Threads    :        57

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
79
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 79
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 79: processing genes 7057 - 7147
Calculating significance of each gene.
Using projection method.
7057	HIST1H2BE	1
7058	HIST1H2BF	1
7059	HIST1H2BG	1
7060	HIST1H2BH	1
7061	HIST1H2BI	1
7062	HIST1H2BJ	2.367982e-02
7063	HIST1H2BK	5.013646e-02
7064	HIST1H2BL	1
7065	HIST1H2BM	1
7066	HIST1H2BN	1
7067	HIST1H2BO	1
7068	HIST1H3A	1
7069	HIST1H3B	1
7070	HIST1H3C	1
7071	HIST1H3D	1
7072	HIST1H3E	1
7073	HIST1H3F	1
7074	HIST1H3G	1
7075	HIST1H3H	1
7076	HIST1H3I	1
7077	HIST1H3J	1
7078	HIST1H4A	1
7079	HIST1H4B	4.469332e-02
7080	HIST1H4C	1
7081	HIST1H4D	1
7082	HIST1H4E	1
7083	HIST1H4F	1
7084	HIST1H4G	1
7085	HIST1H4H	1
7086	HIST1H4I	1
7087	HIST1H4J	3.439809e-02
7088	HIST1H4K	1
7089	HIST1H4L	1
7090	HIST2H2AB	1
In gene HIST2H2AC the following bins exceed PROBCAP:
    THCA-DJ-A2PZ-TP	categ 6	N = 394     n = 1	mu =   1.02e-07
7091	HIST2H2AC	1.541479e-03
7092	HIST2H2BE	1
7093	HIST2H2BF	1
7094	HIST2H3D	7.575272e-02
7095	HIST3H2A	2.172266e-02
7096	HIST3H2BB	1
7097	HIST3H3	1
7098	HIST4H4	1
7099	HIVEP1	6.872067e-01
7100	HIVEP2	1
7101	HIVEP3	1
7102	HJURP	1
7103	HK1	1
7104	HK2	7.757657e-02
7105	HK3	1
7106	HKDC1	1.478925e-01
7107	HKR1	1
7108	HLA-A	1
7109	HLA-B	1
7110	HLA-C	1
7111	HLA-DMA	1
7112	HLA-DMB	8.786344e-02
7113	HLA-DOA	8.083872e-02
7114	HLA-DOB	1
7115	HLA-DPA1	1
7116	HLA-DPB1	1.068889e-01
7117	HLA-DQA1	1
7118	HLA-DQA2	1
7119	HLA-DQB1	1
7120	HLA-DRA	6.608073e-02
7121	HLA-DRB1	1
7122	HLA-DRB5	1
7123	HLA-E	6.362239e-02
7124	HLA-F	1
7125	HLA-G	1
7126	HLCS	2.866050e-01
7127	HLF	1
7128	HLTF	1
7129	HLX	1.515011e-01
7130	HM13	1
7131	HMBOX1	1
7132	HMBS	1
7133	HMCN1	3.543333e-01
7134	HMG20A	1
7135	HMG20B	1
7136	HMGA1	1
7137	HMGA2	1
7138	HMGB1	1.626954e-03
7139	HMGB2	1
7140	HMGB3	1
7141	HMGB4	1
7142	HMGCL	1
7143	HMGCLL1	1
7144	HMGCR	1
7145	HMGCS1	1
7146	HMGCS2	1
7147	HMGN1	1
Done

Running MutSig 2:
Scatter job 79: processing genes 7057 - 7147
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
HMCN1
Processing conservation and coverage...
57% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.092251e-02	ci left: 2.256317e-01	ci right 2.423235e-01	k: 2339	n:10000
Cons ci ratio: 1.354280e-01	ci left: 7.204238e-02	ci right 8.260541e-02	k: 772	n:10000
KS ci ratio: 3.422405e-02	ci left: 5.576212e-01	ci right 5.771396e-01	k: 5674	n:10000
HMCN1   10000 perm   4 sec   (2682 perm/sec)   p_kst 5.674000e-01   p_cons 7.720000e-02   p_joint 2.339000e-01

Joint ci ratio: 4.463097e-02	ci left: 2.720965e-01	ci right 2.845680e-01	k: 5566	n:20000
Cons ci ratio: 9.390070e-02	ci left: 7.637423e-02	ci right 8.394836e-02	k: 1602	n:20000
KS ci ratio: 2.425334e-02	ci left: 5.594475e-01	ci right 5.732332e-01	k: 11327	n:20000
HMCN1   20000 perm   10 sec   (2016 perm/sec)   p_kst 5.663500e-01   p_cons 8.010000e-02   p_joint 2.783000e-01

Outputting figure to mutsig2_images.part000000000079/HMCN1.3_17336_20000_0.56635_0.0801_0.2783.png
                gene_name: HMCN1
               theta_stop: 0.094 
                    nperm: 20000 
                     p_ks: 0.57 
        ci_ks_bounds_left: 0.56 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.080 
      ci_cons_bounds_left: 0.076 
     ci_cons_bounds_right: 0.084 
                  p_joint: 0.28 
     ci_joint_bounds_left: 0.27 
    ci_joint_bounds_right: 0.28 

Current progress: 25 percent done.
HIST2H2AC
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.029588e-02	ci left: 3.682841e-01	ci right 3.873871e-01	k: 3778	n:10000
Cons ci ratio: 1.738284e-02	ci left: 8.282899e-01	ci right 8.429141e-01	k: 8357	n:10000
KS ci ratio: 1.353332e-01	ci left: 7.213925e-02	ci right 8.270848e-02	k: 773	n:10000
HIST2H2AC   10000 perm   1 sec   (7033 perm/sec)   p_kst 7.730000e-02   p_cons 8.357000e-01   p_joint 3.778000e-01

Joint ci ratio: 3.551525e-02	ci left: 3.717712e-01	ci right 3.852641e-01	k: 7570	n:20000
Cons ci ratio: 1.301356e-02	ci left: 8.139973e-01	ci right 8.247097e-01	k: 16388	n:20000
KS ci ratio: 9.678552e-02	ci left: 7.211979e-02	ci right 7.950409e-02	k: 1515	n:20000
HIST2H2AC   20000 perm   3 sec   (6222 perm/sec)   p_kst 7.575000e-02   p_cons 8.194000e-01   p_joint 3.785000e-01

Outputting figure to mutsig2_images.part000000000079/HIST2H2AC.2_394_20000_0.07575_0.8194_0.3785.png
                gene_name: HIST2H2AC
               theta_stop: 0.097 
                    nperm: 20000 
                     p_ks: 0.076 
        ci_ks_bounds_left: 0.072 
       ci_ks_bounds_right: 0.080 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.82 
                  p_joint: 0.38 
     ci_joint_bounds_left: 0.37 
    ci_joint_bounds_right: 0.39 

Current progress: 50 percent done.
HK2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.647618e-02	ci left: 6.775056e-01	ci right 6.957856e-01	k: 6867	n:10000
KS ci ratio: 1.082595e-02	ci left: 9.239968e-01	ci right 9.341516e-01	k: 9292	n:10000
HK2   10000 perm   2 sec   (5836 perm/sec)   p_kst 9.292000e-01   p_cons 6.867000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000079/HK2.2_2826_10000_0.9292_0.6867_1.png
                gene_name: HK2
               theta_stop: 0.026 
                    nperm: 10000 
                     p_ks: 0.93 
        ci_ks_bounds_left: 0.92 
       ci_ks_bounds_right: 0.93 
                   p_cons: 0.69 
      ci_cons_bounds_left: 0.68 
     ci_cons_bounds_right: 0.70 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
HMGB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.545313e-02	ci left: 5.401859e-01	ci right 5.597849e-01	k: 5500	n:10000
KS ci ratio: 1.216596e-02	ci left: 9.064824e-01	ci right 9.176761e-01	k: 9122	n:10000
HMGB1   10000 perm   1 sec   (7139 perm/sec)   p_kst 9.122000e-01   p_cons 5.500000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000079/HMGB1.2_664_10000_0.9122_0.55_1.png
                gene_name: HMGB1
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000079
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 79 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1725>
Subject: Job 8704232: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1725>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000080> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 19:35:17 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000080.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000080.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 80  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000080.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    115.74 sec.
    Max Memory :      5578 MB
    Max Swap   :      8462 MB

    Max Processes  :         7
    Max Threads    :        67

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
80
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 80
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 80: processing genes 7148 - 7237
Calculating significance of each gene.
Using projection method.
7148	HMGN2	1
7149	HMGN3	1
7150	HMGN4	1
7151	HMGN5	1
7152	HMGXB4	1
7153	HMHA1	1
7154	HMHB1	1
In gene HMMR the following bins exceed PROBCAP:
    THCA-DJ-A3UV-TP	categ 6	N = 2200    n = 1	mu =   1.01e-07
7155	HMMR	1.103205e-01
7156	HMOX1	1
7157	HMOX2	1.157578e-01
7158	HMP19	1
7159	HMSD	1
7160	HMX2	1
7161	HMX3	1
7162	HN1	1
7163	HN1L	1
7164	HNF1A	1
7165	HNF1B	1
7166	HNF4A	2.132697e-02
7167	HNF4G	1
7168	HNMT	1
7169	HNRNPA0	1
7170	HNRNPA1	1
7171	HNRNPA1L2	9.347526e-02
7172	HNRNPA2B1	1
7173	HNRNPA3	1
7174	HNRNPAB	1
In gene HNRNPC the following bins exceed PROBCAP:
    THCA-ET-A3DS-TP	categ 6	N = 949     n = 1	mu =   3.48e-08
7175	HNRNPC	1.776073e-02
7176	HNRNPCL1	1
7177	HNRNPD	1
7178	HNRNPF	1
7179	HNRNPH1	1
7180	HNRNPH2	4.114930e-02
7181	HNRNPH3	1
7182	HNRNPK	1
7183	HNRNPL	1
7184	HNRNPM	1
7185	HNRNPR	1
In gene HNRNPU the following bins exceed PROBCAP:
    THCA-DJ-A1QF-TP	categ 6	N = 2129    n = 1	mu =   3.45e-08
7186	HNRNPU	6.605982e-02
7187	HNRNPUL1	1
7188	HNRNPUL2	5.175422e-02
7189	HNRPDL	8.838271e-03
7190	HNRPLL	1
7191	HOMER1	1.547052e-01
7192	HOMER2	1
7193	HOMER3	1
7194	HOMEZ	1
7195	HOOK1	1
7196	HOOK2	1
7197	HOOK3	8.723551e-03
7198	HOPX	1
7199	HORMAD1	1
7200	HORMAD2	1
7201	HOXA1	1
7202	HOXA10	1
7203	HOXA11	1
7204	HOXA13	1
7205	HOXA2	1
7206	HOXA3	1
7207	HOXA4	1
7208	HOXA5	1
7209	HOXA6	6.115512e-02
7210	HOXA7	1
7211	HOXA9	1
7212	HOXB1	1
7213	HOXB13	1
7214	HOXB2	1
7215	HOXB3	1
7216	HOXB4	1
7217	HOXB5	1
7218	HOXB6	1
7219	HOXB7	4.532824e-02
7220	HOXB8	1
7221	HOXB9	1
7222	HOXC10	1
7223	HOXC11	1
7224	HOXC12	1
7225	HOXC13	1
7226	HOXC4	1
7227	HOXC5	1
7228	HOXC6	1
7229	HOXC8	1
7230	HOXC9	1
7231	HOXD1	1
7232	HOXD10	1
7233	HOXD11	1
7234	HOXD12	6.799802e-03
7235	HOXD13	1
7236	HOXD3	1
7237	HOXD4	1
Done

Running MutSig 2:
Scatter job 80: processing genes 7148 - 7237
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
HNF4A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.993563e-02	ci left: 2.905320e-01	ci right 3.085849e-01	k: 2995	n:10000
Cons ci ratio: 9.731480e-02	ci left: 1.327651e-01	ci right 1.464456e-01	k: 1395	n:10000
KS ci ratio: 2.808936e-02	ci left: 6.513244e-01	ci right 6.699820e-01	k: 6607	n:10000
HNF4A   10000 perm   6 sec   (1794 perm/sec)   p_kst 6.607000e-01   p_cons 1.395000e-01   p_joint 2.995000e-01

Outputting figure to mutsig2_images.part000000000080/HNF4A.2_1643_10000_0.6607_0.1395_0.2995.png
                gene_name: HNF4A
               theta_stop: 0.097 
                    nperm: 10000 
                     p_ks: 0.66 
        ci_ks_bounds_left: 0.65 
       ci_ks_bounds_right: 0.67 
                   p_cons: 0.14 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.15 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.31 

Current progress: 20 percent done.
HNRNPUL2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.791403e-02	ci left: 5.067519e-01	ci right 5.264384e-01	k: 5166	n:10000
Cons ci ratio: 8.103232e-03	ci left: 9.550321e-01	ci right 9.628976e-01	k: 9591	n:10000
KS ci ratio: 1.324787e-01	ci left: 7.514340e-02	ci right 8.590246e-02	k: 804	n:10000
HNRNPUL2   10000 perm   1 sec   (6845 perm/sec)   p_kst 8.040000e-02   p_cons 9.591000e-01   p_joint 5.166000e-01

Joint ci ratio: 3.921617e-02	ci left: 3.265676e-01	ci right 3.396810e-01	k: 6662	n:20000
Cons ci ratio: 6.092770e-03	ci left: 9.509535e-01	ci right 9.568136e-01	k: 19079	n:20000
KS ci ratio: 9.386888e-02	ci left: 7.642315e-02	ci right 8.399943e-02	k: 1603	n:20000
HNRNPUL2   20000 perm   3 sec   (5919 perm/sec)   p_kst 8.015000e-02   p_cons 9.539500e-01   p_joint 3.331000e-01

Outputting figure to mutsig2_images.part000000000080/HNRNPUL2.2_2300_20000_0.08015_0.95395_0.3331.png
                gene_name: HNRNPUL2
               theta_stop: 0.094 
                    nperm: 20000 
                     p_ks: 0.080 
        ci_ks_bounds_left: 0.076 
       ci_ks_bounds_right: 0.084 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.95 
     ci_cons_bounds_right: 0.96 
                  p_joint: 0.33 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.34 

Current progress: 40 percent done.
HNRPDL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.446865e-02	ci left: 5.541131e-01	ci right 5.736497e-01	k: 5639	n:10000
Cons ci ratio: 2.544131e-02	ci left: 6.945411e-01	ci right 7.125402e-01	k: 7036	n:10000
KS ci ratio: 4.286032e-02	ci left: 4.456034e-01	ci right 4.652226e-01	k: 4554	n:10000
HNRPDL   10000 perm   1 sec   (7850 perm/sec)   p_kst 4.554000e-01   p_cons 7.036000e-01   p_joint 5.639000e-01

Outputting figure to mutsig2_images.part000000000080/HNRPDL.2_1291_10000_0.4554_0.7036_0.5639.png
                gene_name: HNRPDL
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.70 
      ci_cons_bounds_left: 0.69 
     ci_cons_bounds_right: 0.71 
                  p_joint: 0.56 
     ci_joint_bounds_left: 0.55 
    ci_joint_bounds_right: 0.57 

Current progress: 60 percent done.
HOOK3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.000262e-03	ci left: 9.455455e-01	ci right 9.541901e-01	k: 9500	n:10000
Cons ci ratio: 5.392946e-02	ci left: 3.362752e-01	ci right 3.550148e-01	k: 3456	n:10000
KS ci ratio: 1.374239e-02	ci left: 8.843180e-01	ci right 8.966535e-01	k: 8906	n:10000
HOOK3   10000 perm   1 sec   (7107 perm/sec)   p_kst 8.906000e-01   p_cons 3.456000e-01   p_joint 9.500000e-01

Outputting figure to mutsig2_images.part000000000080/HOOK3.2_2245_10000_0.8906_0.3456_0.95.png
                gene_name: HOOK3
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.95 
     ci_joint_bounds_left: 0.95 
    ci_joint_bounds_right: 0.95 

Current progress: 80 percent done.
HOXD12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.823653e-02	ci left: 8.144611e-01	ci right 8.295509e-01	k: 8221	n:10000
KS ci ratio: 1.803680e-02	ci left: 8.177134e-01	ci right 8.326966e-01	k: 8253	n:10000
HOXD12   10000 perm   1 sec   (7810 perm/sec)   p_kst 8.253000e-01   p_cons 8.221000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000080/HOXD12.2_821_10000_0.8253_0.8221_1.png
                gene_name: HOXD12
               theta_stop: 0.018 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.83 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000080
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 80 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1724>
Subject: Job 8704234: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1724>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000081> was used as the working directory.
Started at Thu Nov 15 19:33:15 2012
Results reported at Thu Nov 15 22:10:59 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000081.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000081.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 81  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000081.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   9524.89 sec.
    Max Memory :      5816 MB
    Max Swap   :      8582 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
81
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 81
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 81: processing genes 7238 - 7328
Calculating significance of each gene.
Using projection method.
7238	HOXD8	1
7239	HOXD9	1
7240	HP	1
7241	HP1BP3	1
7242	HPCA	1
7243	HPCAL1	1
7244	HPCAL4	1
7245	HPD	6.652860e-02
7246	HPDL	1
7247	HPGD	1
7248	HPGDS	1
7249	HPN	1
7250	HPR	1
7251	HPRT1	1
7252	HPS1	1
7253	HPS3	1
7254	HPS4	1
7255	HPS5	1
7256	HPS6	1
7257	HPSE	1
7258	HPSE2	1
7259	HPX	1
7260	HR	9.285501e-02
7261	HRAS	1.931788e-14
7262	HRASLS	1
7263	HRASLS2	1
7264	HRASLS5	1
7265	HRC	1
7266	HRCT1	1
7267	HRG	1
7268	HRH1	9.375918e-02
7269	HRH2	1
7270	HRH3	1
7271	HRH4	1
7272	HRNR	2.051965e-01
7273	HRSP12	1
7274	HS1BP3	1
7275	HS2ST1	1
7276	HS3ST1	1
7277	HS3ST2	7.349052e-02
7278	HS3ST3A1	1
7279	HS3ST3B1	1
7280	HS3ST4	1.279011e-01
7281	HS3ST5	1
7282	HS3ST6	1
7283	HS6ST1	1
7284	HS6ST2	1.362304e-01
7285	HS6ST3	1
7286	HSBP1	1
7287	HSCB	1
7288	HSD11B1	1
7289	HSD11B1L	1
7290	HSD11B2	1
7291	HSD17B1	1
7292	HSD17B10	1
7293	HSD17B11	1
7294	HSD17B12	1
7295	HSD17B13	1
7296	HSD17B14	1
7297	HSD17B2	1
7298	HSD17B3	1
7299	HSD17B4	1
7300	HSD17B6	1
7301	HSD17B7	1
7302	HSD17B8	1
7303	HSD3B1	1
7304	HSD3B2	1
7305	HSD3B7	1.665322e-01
7306	HSDL1	1
7307	HSDL2	1
7308	HSF1	1.555372e-01
7309	HSF2	1
7310	HSF2BP	1
7311	HSF4	1
7312	HSF5	1
7313	HSH2D	1
7314	HSP90AA1	2.239382e-01
7315	HSP90AB1	1
7316	HSP90B1	1
7317	HSPA12A	1
7318	HSPA12B	1
7319	HSPA13	1
7320	HSPA14	1
7321	HSPA1A	1
7322	HSPA1B	1
7323	HSPA1L	1.784306e-01
7324	HSPA2	1
7325	HSPA4	8.226072e-02
7326	HSPA4L	1
7327	HSPA5	1
7328	HSPA6	1
Done

Running MutSig 2:
Scatter job 81: processing genes 7238 - 7328
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
HRAS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
HRAS   10000 perm   1 sec   (7000 perm/sec)   p_kst 1.000000e-04   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 2.262987e+00	ci left: 1.211069e-05	ci right 3.611872e-04	k: 2	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
HRAS   20000 perm   5 sec   (4003 perm/sec)   p_kst 5.000000e-05   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919869e+00	ci left: 0	ci right 1.229551e-04	k: 0	n:30000
Cons ci ratio: 1.752902e+00	ci left: 3.633000e-05	ci right 3.413508e-04	k: 4	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
HRAS   30000 perm   7 sec   (4443 perm/sec)   p_kst 3.333333e-05   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919902e+00	ci left: 0	ci right 9.221773e-05	k: 0	n:40000
Cons ci ratio: 1.600193e+00	ci left: 4.058837e-05	ci right 2.916840e-04	k: 5	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
HRAS   40000 perm   9 sec   (4676 perm/sec)   p_kst 2.500000e-05   p_cons 1.250000e-04   p_joint 0

Joint ci ratio: 3.919922e+00	ci left: 0	ci right 7.377487e-05	k: 0	n:50000
Cons ci ratio: 1.600221e+00	ci left: 3.247050e-05	ci right 2.333511e-04	k: 5	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
HRAS   50000 perm   11 sec   (4758 perm/sec)   p_kst 2.000000e-05   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919935e+00	ci left: 0	ci right 6.147943e-05	k: 0	n:60000
Cons ci ratio: 1.481522e+00	ci left: 3.669909e-05	ci right 2.176451e-04	k: 6	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
HRAS   60000 perm   12 sec   (4822 perm/sec)   p_kst 1.666667e-05   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919944e+00	ci left: 0	ci right 5.269689e-05	k: 0	n:70000
Cons ci ratio: 1.481536e+00	ci left: 3.145626e-05	ci right 1.865545e-04	k: 6	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
HRAS   70000 perm   14 sec   (4844 perm/sec)   p_kst 1.428571e-05   p_cons 8.571429e-05   p_joint 0

Joint ci ratio: 3.919951e+00	ci left: 0	ci right 4.610993e-05	k: 0	n:80000
Cons ci ratio: 1.481547e+00	ci left: 2.752416e-05	ci right 1.632362e-04	k: 6	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
HRAS   80000 perm   17 sec   (4838 perm/sec)   p_kst 1.250000e-05   p_cons 7.500000e-05   p_joint 0

Joint ci ratio: 3.919956e+00	ci left: 0	ci right 4.098671e-05	k: 0	n:90000
Cons ci ratio: 1.385860e+00	ci left: 3.127125e-05	ci right 1.602453e-04	k: 7	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
HRAS   90000 perm   19 sec   (4811 perm/sec)   p_kst 1.111111e-05   p_cons 7.777778e-05   p_joint 0

Joint ci ratio: 3.919961e+00	ci left: 0	ci right 3.688811e-05	k: 0	n:100000
Cons ci ratio: 1.306601e+00	ci left: 3.453893e-05	ci right 1.576258e-04	k: 8	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
HRAS   100000 perm   21 sec   (4773 perm/sec)   p_kst 1.000000e-05   p_cons 8.000000e-05   p_joint 0

Joint ci ratio: 3.919964e+00	ci left: 0	ci right 3.353471e-05	k: 0	n:110000
Cons ci ratio: 1.306607e+00	ci left: 3.139898e-05	ci right 1.432967e-04	k: 8	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
HRAS   110000 perm   23 sec   (4732 perm/sec)   p_kst 9.090909e-06   p_cons 7.272727e-05   p_joint 0

Joint ci ratio: 3.919967e+00	ci left: 0	ci right 3.074019e-05	k: 0	n:120000
Cons ci ratio: 1.131545e+00	ci left: 4.576053e-05	ci right 1.640111e-04	k: 11	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
HRAS   120000 perm   26 sec   (4680 perm/sec)   p_kst 8.333333e-06   p_cons 9.166667e-05   p_joint 0

Joint ci ratio: 3.919970e+00	ci left: 0	ci right 2.837559e-05	k: 0	n:130000
Cons ci ratio: 1.131550e+00	ci left: 4.224043e-05	ci right 1.513952e-04	k: 11	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
HRAS   130000 perm   28 sec   (4628 perm/sec)   p_kst 7.692308e-06   p_cons 8.461538e-05   p_joint 0

Joint ci ratio: 3.919972e+00	ci left: 0	ci right 2.634879e-05	k: 0	n:140000
Cons ci ratio: 1.047608e+00	ci left: 4.944341e-05	ci right 1.587833e-04	k: 13	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
HRAS   140000 perm   31 sec   (4574 perm/sec)   p_kst 7.142857e-06   p_cons 9.285714e-05   p_joint 0

Joint ci ratio: 3.919974e+00	ci left: 0	ci right 2.459223e-05	k: 0	n:150000
Cons ci ratio: 1.047612e+00	ci left: 4.614713e-05	ci right 1.481981e-04	k: 13	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
HRAS   150000 perm   33 sec   (4522 perm/sec)   p_kst 6.666667e-06   p_cons 8.666667e-05   p_joint 0

Joint ci ratio: 3.919976e+00	ci left: 0	ci right 2.305523e-05	k: 0	n:160000
Cons ci ratio: 1.012089e+00	ci left: 4.783786e-05	ci right 1.468058e-04	k: 14	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
HRAS   160000 perm   36 sec   (4469 perm/sec)   p_kst 6.250000e-06   p_cons 8.750000e-05   p_joint 0

Joint ci ratio: 3.919977e+00	ci left: 0	ci right 2.169906e-05	k: 0	n:170000
Cons ci ratio: 1.012092e+00	ci left: 4.502383e-05	ci right 1.381704e-04	k: 14	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
HRAS   170000 perm   39 sec   (4415 perm/sec)   p_kst 5.882353e-06   p_cons 8.235294e-05   p_joint 0

Joint ci ratio: 3.919978e+00	ci left: 0	ci right 2.049356e-05	k: 0	n:180000
Cons ci ratio: 9.799537e-01	ci left: 4.664176e-05	ci right 1.374419e-04	k: 15	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
HRAS   180000 perm   41 sec   (4361 perm/sec)   p_kst 5.555556e-06   p_cons 8.333333e-05   p_joint 0

Joint ci ratio: 3.919979e+00	ci left: 0	ci right 1.941497e-05	k: 0	n:190000
Cons ci ratio: 9.506946e-01	ci left: 4.813433e-05	ci right 1.367490e-04	k: 16	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
HRAS   190000 perm   44 sec   (4304 perm/sec)   p_kst 5.263158e-06   p_cons 8.421053e-05   p_joint 0

Joint ci ratio: 3.919980e+00	ci left: 0	ci right 1.844423e-05	k: 0	n:200000
Cons ci ratio: 9.506969e-01	ci left: 4.572758e-05	ci right 1.299117e-04	k: 16	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
HRAS   200000 perm   47 sec   (4245 perm/sec)   p_kst 5.000000e-06   p_cons 8.000000e-05   p_joint 0

Joint ci ratio: 3.919981e+00	ci left: 0	ci right 1.756594e-05	k: 0	n:210000
Cons ci ratio: 9.506989e-01	ci left: 4.355005e-05	ci right 1.237256e-04	k: 16	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
HRAS   210000 perm   50 sec   (4192 perm/sec)   p_kst 4.761905e-06   p_cons 7.619048e-05   p_joint 0

Joint ci ratio: 3.919982e+00	ci left: 0	ci right 1.676749e-05	k: 0	n:220000
Cons ci ratio: 9.239130e-01	ci left: 4.501483e-05	ci right 1.237182e-04	k: 17	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
HRAS   220000 perm   53 sec   (4139 perm/sec)   p_kst 4.545455e-06   p_cons 7.727273e-05   p_joint 0

Joint ci ratio: 3.919983e+00	ci left: 0	ci right 1.603848e-05	k: 0	n:230000
Cons ci ratio: 8.553732e-01	ci left: 5.311609e-05	ci right 1.342941e-04	k: 20	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
HRAS   230000 perm   56 sec   (4087 perm/sec)   p_kst 4.347826e-06   p_cons 8.695652e-05   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.537021e-05	k: 0	n:240000
Cons ci ratio: 8.357068e-01	ci left: 5.416467e-05	ci right 1.337500e-04	k: 21	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
HRAS   240000 perm   60 sec   (4031 perm/sec)   p_kst 4.166667e-06   p_cons 8.750000e-05   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.475541e-05	k: 0	n:250000
Cons ci ratio: 8.001266e-01	ci left: 5.832097e-05	ci right 1.380420e-04	k: 23	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
HRAS   250000 perm   63 sec   (3978 perm/sec)   p_kst 4.000000e-06   p_cons 9.200000e-05   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.418790e-05	k: 0	n:260000
Cons ci ratio: 8.001282e-01	ci left: 5.607783e-05	ci right 1.327328e-04	k: 23	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
HRAS   260000 perm   66 sec   (3930 perm/sec)   p_kst 3.846154e-06   p_cons 8.846154e-05   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.366242e-05	k: 0	n:270000
Cons ci ratio: 8.001296e-01	ci left: 5.400084e-05	ci right 1.278169e-04	k: 23	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
HRAS   270000 perm   70 sec   (3882 perm/sec)   p_kst 3.703704e-06   p_cons 8.518519e-05   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.317448e-05	k: 0	n:280000
Cons ci ratio: 7.839636e-01	ci left: 5.491951e-05	ci right 1.275334e-04	k: 24	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
HRAS   280000 perm   73 sec   (3833 perm/sec)   p_kst 3.571429e-06   p_cons 8.571429e-05   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.272019e-05	k: 0	n:290000
Cons ci ratio: 7.543679e-01	ci left: 5.856654e-05	ci right 1.313629e-04	k: 26	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
HRAS   290000 perm   77 sec   (3787 perm/sec)   p_kst 3.448276e-06   p_cons 8.965517e-05   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.229619e-05	k: 0	n:300000
Cons ci ratio: 7.543691e-01	ci left: 5.661430e-05	ci right 1.269842e-04	k: 26	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
HRAS   300000 perm   80 sec   (3742 perm/sec)   p_kst 3.333333e-06   p_cons 8.666667e-05   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.189954e-05	k: 0	n:310000
Cons ci ratio: 7.156550e-01	ci left: 6.265169e-05	ci right 1.343483e-04	k: 29	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
HRAS   310000 perm   84 sec   (3695 perm/sec)   p_kst 3.225806e-06   p_cons 9.354839e-05   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.152768e-05	k: 0	n:320000
Cons ci ratio: 7.040176e-01	ci left: 6.325360e-05	ci right 1.338313e-04	k: 30	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
HRAS   320000 perm   88 sec   (3652 perm/sec)   p_kst 3.125000e-06   p_cons 9.375000e-05   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.117836e-05	k: 0	n:330000
Cons ci ratio: 7.040186e-01	ci left: 6.133680e-05	ci right 1.297759e-04	k: 30	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
HRAS   330000 perm   92 sec   (3605 perm/sec)   p_kst 3.030303e-06   p_cons 9.090909e-05   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.084959e-05	k: 0	n:340000
Cons ci ratio: 6.722399e-01	ci left: 6.681174e-05	ci right 1.363040e-04	k: 33	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
HRAS   340000 perm   95 sec   (3563 perm/sec)   p_kst 2.941176e-06   p_cons 9.705882e-05   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.053960e-05	k: 0	n:350000
Cons ci ratio: 6.722408e-01	ci left: 6.490281e-05	ci right 1.324097e-04	k: 33	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
HRAS   350000 perm   99 sec   (3523 perm/sec)   p_kst 2.857143e-06   p_cons 9.428571e-05   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.024683e-05	k: 0	n:360000
Cons ci ratio: 6.625678e-01	ci left: 6.540638e-05	ci right 1.319742e-04	k: 34	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
HRAS   360000 perm   103 sec   (3480 perm/sec)   p_kst 2.777778e-06   p_cons 9.444444e-05   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 9.969895e-06	k: 0	n:370000
Cons ci ratio: 6.444109e-01	ci left: 6.814673e-05	ci right 1.346980e-04	k: 36	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
HRAS   370000 perm   108 sec   (3428 perm/sec)   p_kst 2.702703e-06   p_cons 9.729730e-05   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.707530e-06	k: 0	n:380000
Cons ci ratio: 6.358753e-01	ci left: 6.855725e-05	ci right 1.342071e-04	k: 37	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
HRAS   380000 perm   112 sec   (3389 perm/sec)   p_kst 2.631579e-06   p_cons 9.736842e-05   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.458621e-06	k: 0	n:390000
Cons ci ratio: 6.276702e-01	ci left: 6.895233e-05	ci right 1.337360e-04	k: 38	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
HRAS   390000 perm   116 sec   (3352 perm/sec)   p_kst 2.564103e-06   p_cons 9.743590e-05   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.222156e-06	k: 0	n:400000
Cons ci ratio: 6.276710e-01	ci left: 6.722850e-05	ci right 1.303926e-04	k: 38	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
HRAS   400000 perm   121 sec   (3318 perm/sec)   p_kst 2.500000e-06   p_cons 9.500000e-05   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 8.997226e-06	k: 0	n:410000
Cons ci ratio: 6.276717e-01	ci left: 6.558876e-05	ci right 1.272124e-04	k: 38	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
HRAS   410000 perm   125 sec   (3283 perm/sec)   p_kst 2.439024e-06   p_cons 9.268293e-05   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.783008e-06	k: 0	n:420000
Cons ci ratio: 6.276725e-01	ci left: 6.402711e-05	ci right 1.241835e-04	k: 38	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
HRAS   420000 perm   129 sec   (3249 perm/sec)   p_kst 2.380952e-06   p_cons 9.047619e-05   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.578753e-06	k: 0	n:430000
Cons ci ratio: 6.197769e-01	ci left: 6.449568e-05	ci right 1.239846e-04	k: 39	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
HRAS   430000 perm   134 sec   (3212 perm/sec)   p_kst 2.325581e-06   p_cons 9.069767e-05   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.383782e-06	k: 0	n:440000
Cons ci ratio: 6.121719e-01	ci left: 6.494756e-05	ci right 1.237903e-04	k: 40	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
HRAS   440000 perm   138 sec   (3179 perm/sec)   p_kst 2.272727e-06   p_cons 9.090909e-05   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.197476e-06	k: 0	n:450000
Cons ci ratio: 6.121726e-01	ci left: 6.350426e-05	ci right 1.210395e-04	k: 40	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
HRAS   450000 perm   143 sec   (3145 perm/sec)   p_kst 2.222222e-06   p_cons 8.888889e-05   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.019271e-06	k: 0	n:460000
Cons ci ratio: 6.121732e-01	ci left: 6.212372e-05	ci right 1.184082e-04	k: 40	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
HRAS   460000 perm   148 sec   (3113 perm/sec)   p_kst 2.173913e-06   p_cons 8.695652e-05   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.848649e-06	k: 0	n:470000
Cons ci ratio: 6.121738e-01	ci left: 6.080192e-05	ci right 1.158890e-04	k: 40	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
HRAS   470000 perm   153 sec   (3079 perm/sec)   p_kst 2.127660e-06   p_cons 8.510638e-05   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.685136e-06	k: 0	n:480000
Cons ci ratio: 7.543823e-01	ci left: 3.538376e-05	ci right 7.936572e-05	k: 26	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
HRAS   480000 perm   158 sec   (3047 perm/sec)   p_kst 2.083333e-06   p_cons 5.416667e-05   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.528297e-06	k: 0	n:490000
Cons ci ratio: 7.407884e-01	ci left: 3.631290e-05	ci right 8.016957e-05	k: 27	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
HRAS   490000 perm   162 sec   (3017 perm/sec)   p_kst 2.040816e-06   p_cons 5.510204e-05   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.377732e-06	k: 0	n:500000
Cons ci ratio: 7.279039e-01	ci left: 3.721191e-05	ci right 8.093458e-05	k: 28	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
HRAS   500000 perm   167 sec   (2987 perm/sec)   p_kst 2.000000e-06   p_cons 5.600000e-05   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.233071e-06	k: 0	n:510000
Cons ci ratio: 7.279043e-01	ci left: 3.648225e-05	ci right 7.934765e-05	k: 28	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
HRAS   510000 perm   172 sec   (2957 perm/sec)   p_kst 1.960784e-06   p_cons 5.490196e-05   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.093974e-06	k: 0	n:520000
Cons ci ratio: 7.279047e-01	ci left: 3.578067e-05	ci right 7.782175e-05	k: 28	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
HRAS   520000 perm   178 sec   (2929 perm/sec)   p_kst 1.923077e-06   p_cons 5.384615e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.960126e-06	k: 0	n:530000
Cons ci ratio: 7.156699e-01	ci left: 3.664512e-05	ci right 7.858177e-05	k: 29	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
HRAS   530000 perm   183 sec   (2900 perm/sec)   p_kst 1.886792e-06   p_cons 5.471698e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.831235e-06	k: 0	n:540000
Cons ci ratio: 7.040319e-01	ci left: 3.748340e-05	ci right 7.930807e-05	k: 30	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
HRAS   540000 perm   188 sec   (2872 perm/sec)   p_kst 1.851852e-06   p_cons 5.555556e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.707031e-06	k: 0	n:550000
Cons ci ratio: 7.040323e-01	ci left: 3.680188e-05	ci right 7.786612e-05	k: 30	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
HRAS   550000 perm   193 sec   (2845 perm/sec)   p_kst 1.818182e-06   p_cons 5.454545e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.587263e-06	k: 0	n:560000
Cons ci ratio: 6.823637e-01	ci left: 3.908599e-05	ci right 8.066772e-05	k: 32	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
HRAS   560000 perm   199 sec   (2818 perm/sec)   p_kst 1.785714e-06   p_cons 5.714286e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.471697e-06	k: 0	n:570000
Cons ci ratio: 6.823641e-01	ci left: 3.840027e-05	ci right 7.925251e-05	k: 32	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
HRAS   570000 perm   204 sec   (2791 perm/sec)   p_kst 1.754386e-06   p_cons 5.614035e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.360117e-06	k: 0	n:580000
Cons ci ratio: 6.823644e-01	ci left: 3.773819e-05	ci right 7.788610e-05	k: 32	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
HRAS   580000 perm   210 sec   (2765 perm/sec)   p_kst 1.724138e-06   p_cons 5.517241e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.252319e-06	k: 0	n:590000
Cons ci ratio: 6.722545e-01	ci left: 3.850146e-05	ci right 7.854872e-05	k: 33	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
HRAS   590000 perm   215 sec   (2739 perm/sec)   p_kst 1.694915e-06   p_cons 5.593220e-05   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.148114e-06	k: 0	n:600000
Cons ci ratio: 6.722548e-01	ci left: 3.785976e-05	ci right 7.723959e-05	k: 33	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
HRAS   600000 perm   221 sec   (2712 perm/sec)   p_kst 1.666667e-06   p_cons 5.500000e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 6.047325e-06	k: 0	n:610000
Cons ci ratio: 6.722552e-01	ci left: 3.723911e-05	ci right 7.597338e-05	k: 33	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
HRAS   610000 perm   227 sec   (2685 perm/sec)   p_kst 1.639344e-06   p_cons 5.409836e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.949788e-06	k: 0	n:620000
Cons ci ratio: 6.722555e-01	ci left: 3.663847e-05	ci right 7.474802e-05	k: 33	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
HRAS   620000 perm   233 sec   (2661 perm/sec)   p_kst 1.612903e-06   p_cons 5.322581e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.855347e-06	k: 0	n:630000
Cons ci ratio: 6.625820e-01	ci left: 3.737487e-05	ci right 7.541442e-05	k: 34	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
HRAS   630000 perm   239 sec   (2638 perm/sec)   p_kst 1.587302e-06   p_cons 5.396825e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.763858e-06	k: 0	n:640000
Cons ci ratio: 6.444249e-01	ci left: 3.939711e-05	ci right 7.787287e-05	k: 36	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
HRAS   640000 perm   245 sec   (2615 perm/sec)   p_kst 1.562500e-06   p_cons 5.625000e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.675183e-06	k: 0	n:650000
Cons ci ratio: 6.358889e-01	ci left: 4.007941e-05	ci right 7.846012e-05	k: 37	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
HRAS   650000 perm   251 sec   (2593 perm/sec)   p_kst 1.538462e-06   p_cons 5.692308e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.589196e-06	k: 0	n:660000
Cons ci ratio: 6.197872e-01	ci left: 4.201974e-05	ci right 8.077834e-05	k: 39	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
HRAS   660000 perm   257 sec   (2571 perm/sec)   p_kst 1.515152e-06   p_cons 5.909091e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.505775e-06	k: 0	n:670000
Cons ci ratio: 6.197875e-01	ci left: 4.139257e-05	ci right 7.957271e-05	k: 39	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
HRAS   670000 perm   263 sec   (2550 perm/sec)   p_kst 1.492537e-06   p_cons 5.820896e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.424808e-06	k: 0	n:680000
Cons ci ratio: 6.121822e-01	ci left: 4.202471e-05	ci right 8.010010e-05	k: 40	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
HRAS   680000 perm   269 sec   (2528 perm/sec)   p_kst 1.470588e-06   p_cons 5.882353e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.346188e-06	k: 0	n:690000
Cons ci ratio: 6.121825e-01	ci left: 4.141566e-05	ci right 7.893924e-05	k: 40	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
HRAS   690000 perm   275 sec   (2507 perm/sec)   p_kst 1.449275e-06   p_cons 5.797101e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.269814e-06	k: 0	n:700000
Cons ci ratio: 6.048506e-01	ci left: 4.203219e-05	ci right 7.945793e-05	k: 41	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
HRAS   700000 perm   282 sec   (2486 perm/sec)   p_kst 1.428571e-06   p_cons 5.857143e-05   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.195591e-06	k: 0	n:710000
Cons ci ratio: 5.977759e-01	ci left: 4.263399e-05	ci right 7.995945e-05	k: 42	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
HRAS   710000 perm   288 sec   (2465 perm/sec)   p_kst 1.408451e-06   p_cons 5.915493e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.123431e-06	k: 0	n:720000
Cons ci ratio: 5.977761e-01	ci left: 4.204185e-05	ci right 7.884891e-05	k: 42	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
HRAS   720000 perm   295 sec   (2444 perm/sec)   p_kst 1.388889e-06   p_cons 5.833333e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.053247e-06	k: 0	n:730000
Cons ci ratio: 5.977764e-01	ci left: 4.146593e-05	ci right 7.776880e-05	k: 42	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
HRAS   730000 perm   301 sec   (2425 perm/sec)   p_kst 1.369863e-06   p_cons 5.753425e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.984960e-06	k: 0	n:740000
Cons ci ratio: 5.977766e-01	ci left: 4.090557e-05	ci right 7.671788e-05	k: 42	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
HRAS   740000 perm   308 sec   (2406 perm/sec)   p_kst 1.351351e-06   p_cons 5.675676e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.918494e-06	k: 0	n:750000
Cons ci ratio: 5.977769e-01	ci left: 4.036016e-05	ci right 7.569499e-05	k: 42	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
HRAS   750000 perm   314 sec   (2388 perm/sec)   p_kst 1.333333e-06   p_cons 5.600000e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.853777e-06	k: 0	n:760000
Cons ci ratio: 5.977771e-01	ci left: 3.982910e-05	ci right 7.469901e-05	k: 42	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
HRAS   760000 perm   321 sec   (2369 perm/sec)   p_kst 1.315789e-06   p_cons 5.526316e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.790741e-06	k: 0	n:770000
Cons ci ratio: 5.909450e-01	ci left: 4.041498e-05	ci right 7.522098e-05	k: 43	n:770000
KS ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
HRAS   770000 perm   327 sec   (2352 perm/sec)   p_kst 1.298701e-06   p_cons 5.584416e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.729321e-06	k: 0	n:780000
Cons ci ratio: 5.843419e-01	ci left: 4.098807e-05	ci right 7.572740e-05	k: 44	n:780000
KS ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
HRAS   780000 perm   334 sec   (2333 perm/sec)   p_kst 1.282051e-06   p_cons 5.641026e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.669457e-06	k: 0	n:790000
Cons ci ratio: 5.779553e-01	ci left: 4.154879e-05	ci right 7.621894e-05	k: 45	n:790000
KS ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
HRAS   790000 perm   341 sec   (2315 perm/sec)   p_kst 1.265823e-06   p_cons 5.696203e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.611089e-06	k: 0	n:800000
Cons ci ratio: 5.717736e-01	ci left: 4.209752e-05	ci right 7.669621e-05	k: 46	n:800000
KS ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
HRAS   800000 perm   348 sec   (2298 perm/sec)   p_kst 1.250000e-06   p_cons 5.750000e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.554162e-06	k: 0	n:810000
Cons ci ratio: 5.657861e-01	ci left: 4.263466e-05	ci right 7.715980e-05	k: 47	n:810000
KS ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
HRAS   810000 perm   355 sec   (2281 perm/sec)   p_kst 1.234568e-06   p_cons 5.802469e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.498623e-06	k: 0	n:820000
Cons ci ratio: 5.657864e-01	ci left: 4.211472e-05	ci right 7.621884e-05	k: 47	n:820000
KS ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
HRAS   820000 perm   362 sec   (2264 perm/sec)   p_kst 1.219512e-06   p_cons 5.731707e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.444423e-06	k: 0	n:830000
Cons ci ratio: 5.657866e-01	ci left: 4.160731e-05	ci right 7.530055e-05	k: 47	n:830000
KS ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
HRAS   830000 perm   370 sec   (2246 perm/sec)   p_kst 1.204819e-06   p_cons 5.662651e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.391514e-06	k: 0	n:840000
Cons ci ratio: 5.657868e-01	ci left: 4.111199e-05	ci right 7.440412e-05	k: 47	n:840000
KS ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
HRAS   840000 perm   377 sec   (2228 perm/sec)   p_kst 1.190476e-06   p_cons 5.595238e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.339849e-06	k: 0	n:850000
Cons ci ratio: 5.657870e-01	ci left: 4.062831e-05	ci right 7.352878e-05	k: 47	n:850000
KS ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
HRAS   850000 perm   384 sec   (2211 perm/sec)   p_kst 1.176471e-06   p_cons 5.529412e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.289386e-06	k: 0	n:860000
Cons ci ratio: 5.657871e-01	ci left: 4.015589e-05	ci right 7.267381e-05	k: 47	n:860000
KS ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
HRAS   860000 perm   392 sec   (2194 perm/sec)   p_kst 1.162791e-06   p_cons 5.465116e-05   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.240082e-06	k: 0	n:870000
Cons ci ratio: 5.657873e-01	ci left: 3.969432e-05	ci right 7.183848e-05	k: 47	n:870000
KS ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
HRAS   870000 perm   399 sec   (2178 perm/sec)   p_kst 1.149425e-06   p_cons 5.402299e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.191900e-06	k: 0	n:880000
Cons ci ratio: 5.657875e-01	ci left: 3.924325e-05	ci right 7.102214e-05	k: 47	n:880000
KS ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
HRAS   880000 perm   407 sec   (2162 perm/sec)   p_kst 1.136364e-06   p_cons 5.340909e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.144800e-06	k: 0	n:890000
Cons ci ratio: 5.657877e-01	ci left: 3.880231e-05	ci right 7.022415e-05	k: 47	n:890000
KS ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
HRAS   890000 perm   415 sec   (2147 perm/sec)   p_kst 1.123596e-06   p_cons 5.280899e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.098747e-06	k: 0	n:900000
Cons ci ratio: 5.599844e-01	ci left: 3.932404e-05	ci right 7.071165e-05	k: 48	n:900000
KS ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
HRAS   900000 perm   422 sec   (2131 perm/sec)   p_kst 1.111111e-06   p_cons 5.333333e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.053705e-06	k: 0	n:910000
Cons ci ratio: 5.543562e-01	ci left: 3.983594e-05	ci right 7.118685e-05	k: 49	n:910000
KS ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
HRAS   910000 perm   430 sec   (2115 perm/sec)   p_kst 1.098901e-06   p_cons 5.384615e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.009644e-06	k: 0	n:920000
Cons ci ratio: 5.543564e-01	ci left: 3.940294e-05	ci right 7.041309e-05	k: 49	n:920000
KS ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
HRAS   920000 perm   438 sec   (2098 perm/sec)   p_kst 1.086957e-06   p_cons 5.326087e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.966529e-06	k: 0	n:930000
Cons ci ratio: 5.488944e-01	ci left: 3.990452e-05	ci right 7.087979e-05	k: 50	n:930000
KS ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
HRAS   930000 perm   446 sec   (2083 perm/sec)   p_kst 1.075269e-06   p_cons 5.376344e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.924332e-06	k: 0	n:940000
Cons ci ratio: 5.488946e-01	ci left: 3.948000e-05	ci right 7.012575e-05	k: 50	n:940000
KS ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
HRAS   940000 perm   455 sec   (2068 perm/sec)   p_kst 1.063830e-06   p_cons 5.319149e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.883023e-06	k: 0	n:950000
Cons ci ratio: 5.384381e-01	ci left: 4.088035e-05	ci right 7.177947e-05	k: 52	n:950000
KS ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
HRAS   950000 perm   463 sec   (2053 perm/sec)   p_kst 1.052632e-06   p_cons 5.473684e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.842575e-06	k: 0	n:960000
Cons ci ratio: 5.384383e-01	ci left: 4.045451e-05	ci right 7.103178e-05	k: 52	n:960000
KS ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
HRAS   960000 perm   471 sec   (2039 perm/sec)   p_kst 1.041667e-06   p_cons 5.416667e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.802961e-06	k: 0	n:970000
Cons ci ratio: 5.384384e-01	ci left: 4.003745e-05	ci right 7.029950e-05	k: 52	n:970000
KS ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
HRAS   970000 perm   479 sec   (2025 perm/sec)   p_kst 1.030928e-06   p_cons 5.360825e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.764156e-06	k: 0	n:980000
Cons ci ratio: 5.285576e-01	ci left: 4.139461e-05	ci right 7.189561e-05	k: 54	n:980000
KS ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
HRAS   980000 perm   487 sec   (2011 perm/sec)   p_kst 1.020408e-06   p_cons 5.510204e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.726134e-06	k: 0	n:990000
Cons ci ratio: 5.285577e-01	ci left: 4.097648e-05	ci right 7.116939e-05	k: 54	n:990000
KS ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
HRAS   990000 perm   496 sec   (1996 perm/sec)   p_kst 1.010101e-06   p_cons 5.454545e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.688873e-06	k: 0	n:1000000
Cons ci ratio: 5.238171e-01	ci left: 4.143379e-05	ci right 7.158947e-05	k: 55	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
HRAS   1000000 perm   505 sec   (1982 perm/sec)   p_kst 1.000000e-06   p_cons 5.500000e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.652349e-06	k: 0	n:1010000
Cons ci ratio: 5.192018e-01	ci left: 4.188323e-05	ci right 7.200006e-05	k: 56	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
HRAS   1010000 perm   513 sec   (1968 perm/sec)   p_kst 9.900990e-07   p_cons 5.544554e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.616542e-06	k: 0	n:1020000
Cons ci ratio: 5.147063e-01	ci left: 4.232501e-05	ci right 7.240147e-05	k: 57	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
HRAS   1020000 perm   522 sec   (1955 perm/sec)   p_kst 9.803922e-07   p_cons 5.588235e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.581430e-06	k: 0	n:1030000
Cons ci ratio: 5.147065e-01	ci left: 4.191409e-05	ci right 7.169855e-05	k: 57	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
HRAS   1030000 perm   531 sec   (1941 perm/sec)   p_kst 9.708738e-07   p_cons 5.533981e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.546993e-06	k: 0	n:1040000
Cons ci ratio: 5.103258e-01	ci left: 4.234818e-05	ci right 7.209407e-05	k: 58	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
HRAS   1040000 perm   539 sec   (1928 perm/sec)   p_kst 9.615385e-07   p_cons 5.576923e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.513212e-06	k: 0	n:1050000
Cons ci ratio: 5.060551e-01	ci left: 4.277506e-05	ci right 7.248103e-05	k: 59	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
HRAS   1050000 perm   548 sec   (1914 perm/sec)   p_kst 9.523810e-07   p_cons 5.619048e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.480069e-06	k: 0	n:1060000
Cons ci ratio: 5.060553e-01	ci left: 4.237152e-05	ci right 7.179725e-05	k: 59	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
HRAS   1060000 perm   557 sec   (1902 perm/sec)   p_kst 9.433962e-07   p_cons 5.566038e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.447545e-06	k: 0	n:1070000
Cons ci ratio: 5.060554e-01	ci left: 4.197552e-05	ci right 7.112626e-05	k: 59	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
HRAS   1070000 perm   566 sec   (1889 perm/sec)   p_kst 9.345794e-07   p_cons 5.514019e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.415623e-06	k: 0	n:1080000
Cons ci ratio: 5.060555e-01	ci left: 4.158686e-05	ci right 7.046768e-05	k: 59	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
HRAS   1080000 perm   575 sec   (1877 perm/sec)   p_kst 9.259259e-07   p_cons 5.462963e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.384287e-06	k: 0	n:1090000
Cons ci ratio: 5.060557e-01	ci left: 4.120532e-05	ci right 6.982120e-05	k: 59	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
HRAS   1090000 perm   584 sec   (1866 perm/sec)   p_kst 9.174312e-07   p_cons 5.412844e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.353521e-06	k: 0	n:1100000
Cons ci ratio: 5.018904e-01	ci left: 4.162418e-05	ci right 7.021026e-05	k: 60	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
HRAS   1100000 perm   593 sec   (1854 perm/sec)   p_kst 9.090909e-07   p_cons 5.454545e-05   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.323309e-06	k: 0	n:1110000
Cons ci ratio: 5.018906e-01	ci left: 4.124918e-05	ci right 6.957774e-05	k: 60	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
HRAS   1110000 perm   602 sec   (1843 perm/sec)   p_kst 9.009009e-07   p_cons 5.405405e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.293637e-06	k: 0	n:1120000
Cons ci ratio: 5.018907e-01	ci left: 4.088088e-05	ci right 6.895652e-05	k: 60	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
HRAS   1120000 perm   612 sec   (1831 perm/sec)   p_kst 8.928571e-07   p_cons 5.357143e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.264490e-06	k: 0	n:1130000
Cons ci ratio: 4.899859e-01	ci left: 4.284179e-05	ci right 7.133074e-05	k: 63	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
HRAS   1130000 perm   621 sec   (1819 perm/sec)   p_kst 8.849558e-07   p_cons 5.575221e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.235854e-06	k: 0	n:1140000
Cons ci ratio: 4.862021e-01	ci left: 4.323517e-05	ci right 7.168942e-05	k: 64	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
HRAS   1140000 perm   630 sec   (1808 perm/sec)   p_kst 8.771930e-07   p_cons 5.614035e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.207716e-06	k: 0	n:1150000
Cons ci ratio: 4.862022e-01	ci left: 4.285921e-05	ci right 7.106604e-05	k: 64	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
HRAS   1150000 perm   640 sec   (1797 perm/sec)   p_kst 8.695652e-07   p_cons 5.565217e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.180063e-06	k: 0	n:1160000
Cons ci ratio: 4.862023e-01	ci left: 4.248973e-05	ci right 7.045340e-05	k: 64	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
HRAS   1160000 perm   649 sec   (1787 perm/sec)   p_kst 8.620690e-07   p_cons 5.517241e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.152883e-06	k: 0	n:1170000
Cons ci ratio: 4.862024e-01	ci left: 4.212657e-05	ci right 6.985124e-05	k: 64	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
HRAS   1170000 perm   659 sec   (1776 perm/sec)   p_kst 8.547009e-07   p_cons 5.470085e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.126164e-06	k: 0	n:1180000
Cons ci ratio: 4.862026e-01	ci left: 4.176956e-05	ci right 6.925929e-05	k: 64	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
HRAS   1180000 perm   669 sec   (1765 perm/sec)   p_kst 8.474576e-07   p_cons 5.423729e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.099894e-06	k: 0	n:1190000
Cons ci ratio: 4.862027e-01	ci left: 4.141856e-05	ci right 6.867728e-05	k: 64	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
HRAS   1190000 perm   678 sec   (1755 perm/sec)   p_kst 8.403361e-07   p_cons 5.378151e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.074061e-06	k: 0	n:1200000
Cons ci ratio: 4.825052e-01	ci left: 4.180493e-05	ci right 6.903935e-05	k: 65	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
HRAS   1200000 perm   688 sec   (1744 perm/sec)   p_kst 8.333333e-07   p_cons 5.416667e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.048656e-06	k: 0	n:1210000
Cons ci ratio: 4.825053e-01	ci left: 4.145943e-05	ci right 6.846878e-05	k: 65	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
HRAS   1210000 perm   698 sec   (1734 perm/sec)   p_kst 8.264463e-07   p_cons 5.371901e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.023667e-06	k: 0	n:1220000
Cons ci ratio: 4.788909e-01	ci left: 4.183991e-05	ci right 6.882587e-05	k: 66	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
HRAS   1220000 perm   708 sec   (1724 perm/sec)   p_kst 8.196721e-07   p_cons 5.409836e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.999084e-06	k: 0	n:1230000
Cons ci ratio: 4.788910e-01	ci left: 4.149974e-05	ci right 6.826632e-05	k: 66	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
HRAS   1230000 perm   718 sec   (1714 perm/sec)   p_kst 8.130081e-07   p_cons 5.365854e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.974898e-06	k: 0	n:1240000
Cons ci ratio: 4.788911e-01	ci left: 4.116507e-05	ci right 6.771579e-05	k: 66	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
HRAS   1240000 perm   728 sec   (1704 perm/sec)   p_kst 8.064516e-07   p_cons 5.322581e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.951099e-06	k: 0	n:1250000
Cons ci ratio: 4.788912e-01	ci left: 4.083574e-05	ci right 6.717406e-05	k: 66	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
HRAS   1250000 perm   738 sec   (1695 perm/sec)   p_kst 8.000000e-07   p_cons 5.280000e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.927678e-06	k: 0	n:1260000
Cons ci ratio: 4.753568e-01	ci left: 4.120982e-05	ci right 6.752938e-05	k: 67	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
HRAS   1260000 perm   748 sec   (1684 perm/sec)   p_kst 7.936508e-07   p_cons 5.317460e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.904625e-06	k: 0	n:1270000
Cons ci ratio: 6.444344e-01	ci left: 1.985359e-05	ci right 3.924323e-05	k: 36	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
HRAS   1270000 perm   758 sec   (1675 perm/sec)   p_kst 7.874016e-07   p_cons 2.834646e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.881933e-06	k: 0	n:1280000
Cons ci ratio: 6.444345e-01	ci left: 1.969848e-05	ci right 3.893664e-05	k: 36	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
HRAS   1280000 perm   769 sec   (1665 perm/sec)   p_kst 7.812500e-07   p_cons 2.812500e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.859592e-06	k: 0	n:1290000
Cons ci ratio: 6.444345e-01	ci left: 1.954578e-05	ci right 3.863481e-05	k: 36	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
HRAS   1290000 perm   779 sec   (1656 perm/sec)   p_kst 7.751938e-07   p_cons 2.790698e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.837596e-06	k: 0	n:1300000
Cons ci ratio: 6.444346e-01	ci left: 1.939542e-05	ci right 3.833762e-05	k: 36	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
HRAS   1300000 perm   790 sec   (1647 perm/sec)   p_kst 7.692308e-07   p_cons 2.769231e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.815935e-06	k: 0	n:1310000
Cons ci ratio: 6.444347e-01	ci left: 1.924737e-05	ci right 3.804497e-05	k: 36	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
HRAS   1310000 perm   800 sec   (1637 perm/sec)   p_kst 7.633588e-07   p_cons 2.748092e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.794602e-06	k: 0	n:1320000
Cons ci ratio: 6.444348e-01	ci left: 1.910155e-05	ci right 3.775675e-05	k: 36	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
HRAS   1320000 perm   811 sec   (1628 perm/sec)   p_kst 7.575758e-07   p_cons 2.727273e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.773590e-06	k: 0	n:1330000
Cons ci ratio: 6.358986e-01	ci left: 1.958760e-05	ci right 3.834538e-05	k: 37	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
HRAS   1330000 perm   822 sec   (1619 perm/sec)   p_kst 7.518797e-07   p_cons 2.781955e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.752891e-06	k: 0	n:1340000
Cons ci ratio: 6.358987e-01	ci left: 1.944143e-05	ci right 3.805922e-05	k: 37	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
HRAS   1340000 perm   833 sec   (1610 perm/sec)   p_kst 7.462687e-07   p_cons 2.761194e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.732500e-06	k: 0	n:1350000
Cons ci ratio: 6.358988e-01	ci left: 1.929742e-05	ci right 3.777730e-05	k: 37	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
HRAS   1350000 perm   843 sec   (1601 perm/sec)   p_kst 7.407407e-07   p_cons 2.740741e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.712408e-06	k: 0	n:1360000
Cons ci ratio: 6.358989e-01	ci left: 1.915552e-05	ci right 3.749953e-05	k: 37	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
HRAS   1360000 perm   854 sec   (1592 perm/sec)   p_kst 7.352941e-07   p_cons 2.720588e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.692609e-06	k: 0	n:1370000
Cons ci ratio: 6.276932e-01	ci left: 1.962858e-05	ci right 3.807131e-05	k: 38	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
HRAS   1370000 perm   865 sec   (1583 perm/sec)   p_kst 7.299270e-07   p_cons 2.773723e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.673097e-06	k: 0	n:1380000
Cons ci ratio: 6.276933e-01	ci left: 1.948635e-05	ci right 3.779544e-05	k: 38	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
HRAS   1380000 perm   876 sec   (1575 perm/sec)   p_kst 7.246377e-07   p_cons 2.753623e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.653867e-06	k: 0	n:1390000
Cons ci ratio: 6.197973e-01	ci left: 1.995174e-05	ci right 3.835540e-05	k: 39	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
HRAS   1390000 perm   887 sec   (1566 perm/sec)   p_kst 7.194245e-07   p_cons 2.805755e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.634910e-06	k: 0	n:1400000
Cons ci ratio: 6.197973e-01	ci left: 1.980922e-05	ci right 3.808144e-05	k: 39	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
HRAS   1400000 perm   899 sec   (1558 perm/sec)   p_kst 7.142857e-07   p_cons 2.785714e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.616223e-06	k: 0	n:1410000
Cons ci ratio: 6.197974e-01	ci left: 1.966873e-05	ci right 3.781136e-05	k: 39	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
HRAS   1410000 perm   910 sec   (1549 perm/sec)   p_kst 7.092199e-07   p_cons 2.765957e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.597799e-06	k: 0	n:1420000
Cons ci ratio: 6.197975e-01	ci left: 1.953022e-05	ci right 3.754508e-05	k: 39	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
HRAS   1420000 perm   921 sec   (1541 perm/sec)   p_kst 7.042254e-07   p_cons 2.746479e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.579633e-06	k: 0	n:1430000
Cons ci ratio: 6.197975e-01	ci left: 1.939364e-05	ci right 3.728253e-05	k: 39	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
HRAS   1430000 perm   933 sec   (1533 perm/sec)   p_kst 6.993007e-07   p_cons 2.727273e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.561719e-06	k: 0	n:1440000
Cons ci ratio: 6.197976e-01	ci left: 1.925897e-05	ci right 3.702362e-05	k: 39	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
HRAS   1440000 perm   944 sec   (1525 perm/sec)   p_kst 6.944444e-07   p_cons 2.708333e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.544052e-06	k: 0	n:1450000
Cons ci ratio: 6.197977e-01	ci left: 1.912615e-05	ci right 3.676829e-05	k: 39	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
HRAS   1450000 perm   956 sec   (1517 perm/sec)   p_kst 6.896552e-07   p_cons 2.689655e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.526627e-06	k: 0	n:1460000
Cons ci ratio: 6.197977e-01	ci left: 1.899514e-05	ci right 3.651645e-05	k: 39	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
HRAS   1460000 perm   967 sec   (1510 perm/sec)   p_kst 6.849315e-07   p_cons 2.671233e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.509439e-06	k: 0	n:1470000
Cons ci ratio: 6.121924e-01	ci left: 1.943992e-05	ci right 3.705332e-05	k: 40	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
HRAS   1470000 perm   979 sec   (1502 perm/sec)   p_kst 6.802721e-07   p_cons 2.721088e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.492483e-06	k: 0	n:1480000
Cons ci ratio: 6.121925e-01	ci left: 1.930857e-05	ci right 3.680296e-05	k: 40	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
HRAS   1480000 perm   991 sec   (1494 perm/sec)   p_kst 6.756757e-07   p_cons 2.702703e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.475755e-06	k: 0	n:1490000
Cons ci ratio: 6.048604e-01	ci left: 1.974659e-05	ci right 3.732943e-05	k: 41	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
HRAS   1490000 perm   1002 sec   (1486 perm/sec)   p_kst 6.711409e-07   p_cons 2.751678e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.459250e-06	k: 0	n:1500000
Cons ci ratio: 6.048605e-01	ci left: 1.961494e-05	ci right 3.708057e-05	k: 41	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
HRAS   1500000 perm   1014 sec   (1479 perm/sec)   p_kst 6.666667e-07   p_cons 2.733333e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.442964e-06	k: 0	n:1510000
Cons ci ratio: 6.048605e-01	ci left: 1.948504e-05	ci right 3.683501e-05	k: 41	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
HRAS   1510000 perm   1026 sec   (1471 perm/sec)   p_kst 6.622517e-07   p_cons 2.715232e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.426891e-06	k: 0	n:1520000
Cons ci ratio: 5.977857e-01	ci left: 1.991448e-05	ci right 3.734969e-05	k: 42	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
HRAS   1520000 perm   1038 sec   (1464 perm/sec)   p_kst 6.578947e-07   p_cons 2.763158e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.411029e-06	k: 0	n:1530000
Cons ci ratio: 5.977858e-01	ci left: 1.978432e-05	ci right 3.710557e-05	k: 42	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
HRAS   1530000 perm   1050 sec   (1457 perm/sec)   p_kst 6.535948e-07   p_cons 2.745098e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.395373e-06	k: 0	n:1540000
Cons ci ratio: 5.977859e-01	ci left: 1.965585e-05	ci right 3.686463e-05	k: 42	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
HRAS   1540000 perm   1062 sec   (1450 perm/sec)   p_kst 6.493506e-07   p_cons 2.727273e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.379919e-06	k: 0	n:1550000
Cons ci ratio: 5.977859e-01	ci left: 1.952904e-05	ci right 3.662679e-05	k: 42	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
HRAS   1550000 perm   1074 sec   (1443 perm/sec)   p_kst 6.451613e-07   p_cons 2.709677e-05   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.364664e-06	k: 0	n:1560000
Cons ci ratio: 5.977860e-01	ci left: 1.940385e-05	ci right 3.639201e-05	k: 42	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
HRAS   1560000 perm   1087 sec   (1436 perm/sec)   p_kst 6.410256e-07   p_cons 2.692308e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.349602e-06	k: 0	n:1570000
Cons ci ratio: 5.977860e-01	ci left: 1.928026e-05	ci right 3.616021e-05	k: 42	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
HRAS   1570000 perm   1099 sec   (1429 perm/sec)   p_kst 6.369427e-07   p_cons 2.675159e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.334731e-06	k: 0	n:1580000
Cons ci ratio: 5.977861e-01	ci left: 1.915823e-05	ci right 3.593135e-05	k: 42	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
HRAS   1580000 perm   1111 sec   (1422 perm/sec)   p_kst 6.329114e-07   p_cons 2.658228e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.320047e-06	k: 0	n:1590000
Cons ci ratio: 5.977861e-01	ci left: 1.903774e-05	ci right 3.570537e-05	k: 42	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
HRAS   1590000 perm   1124 sec   (1415 perm/sec)   p_kst 6.289308e-07   p_cons 2.641509e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.305547e-06	k: 0	n:1600000
Cons ci ratio: 5.977862e-01	ci left: 1.891875e-05	ci right 3.548221e-05	k: 42	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
HRAS   1600000 perm   1136 sec   (1408 perm/sec)   p_kst 6.250000e-07   p_cons 2.625000e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.291227e-06	k: 0	n:1610000
Cons ci ratio: 5.977862e-01	ci left: 1.880125e-05	ci right 3.526183e-05	k: 42	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
HRAS   1610000 perm   1149 sec   (1401 perm/sec)   p_kst 6.211180e-07   p_cons 2.608696e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.277083e-06	k: 0	n:1620000
Cons ci ratio: 5.977863e-01	ci left: 1.868519e-05	ci right 3.504416e-05	k: 42	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
HRAS   1620000 perm   1162 sec   (1395 perm/sec)   p_kst 6.172840e-07   p_cons 2.592593e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.263114e-06	k: 0	n:1630000
Cons ci ratio: 5.977863e-01	ci left: 1.857056e-05	ci right 3.482917e-05	k: 42	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
HRAS   1630000 perm   1175 sec   (1388 perm/sec)   p_kst 6.134969e-07   p_cons 2.576687e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.249314e-06	k: 0	n:1640000
Cons ci ratio: 5.977864e-01	ci left: 1.845732e-05	ci right 3.461679e-05	k: 42	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
HRAS   1640000 perm   1187 sec   (1381 perm/sec)   p_kst 6.097561e-07   p_cons 2.560976e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.235682e-06	k: 0	n:1650000
Cons ci ratio: 5.977864e-01	ci left: 1.834546e-05	ci right 3.440700e-05	k: 42	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
HRAS   1650000 perm   1200 sec   (1374 perm/sec)   p_kst 6.060606e-07   p_cons 2.545455e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.222214e-06	k: 0	n:1660000
Cons ci ratio: 5.909542e-01	ci left: 1.874664e-05	ci right 3.489184e-05	k: 43	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
HRAS   1660000 perm   1214 sec   (1368 perm/sec)   p_kst 6.024096e-07   p_cons 2.590361e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.208907e-06	k: 0	n:1670000
Cons ci ratio: 5.909543e-01	ci left: 1.863438e-05	ci right 3.468291e-05	k: 43	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
HRAS   1670000 perm   1227 sec   (1361 perm/sec)   p_kst 5.988024e-07   p_cons 2.574850e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.195759e-06	k: 0	n:1680000
Cons ci ratio: 5.843511e-01	ci left: 1.903010e-05	ci right 3.515933e-05	k: 44	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
HRAS   1680000 perm   1240 sec   (1355 perm/sec)   p_kst 5.952381e-07   p_cons 2.619048e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.182767e-06	k: 0	n:1690000
Cons ci ratio: 5.843511e-01	ci left: 1.891750e-05	ci right 3.495129e-05	k: 44	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
HRAS   1690000 perm   1253 sec   (1349 perm/sec)   p_kst 5.917160e-07   p_cons 2.603550e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.169927e-06	k: 0	n:1700000
Cons ci ratio: 5.843512e-01	ci left: 1.880622e-05	ci right 3.474570e-05	k: 44	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
HRAS   1700000 perm   1266 sec   (1342 perm/sec)   p_kst 5.882353e-07   p_cons 2.588235e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.157237e-06	k: 0	n:1710000
Cons ci ratio: 5.843512e-01	ci left: 1.869624e-05	ci right 3.454251e-05	k: 44	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
HRAS   1710000 perm   1280 sec   (1336 perm/sec)   p_kst 5.847953e-07   p_cons 2.573099e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.144695e-06	k: 0	n:1720000
Cons ci ratio: 5.843513e-01	ci left: 1.858754e-05	ci right 3.434168e-05	k: 44	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
HRAS   1720000 perm   1293 sec   (1330 perm/sec)   p_kst 5.813953e-07   p_cons 2.558140e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.132298e-06	k: 0	n:1730000
Cons ci ratio: 5.779646e-01	ci left: 1.897307e-05	ci right 3.480536e-05	k: 45	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
HRAS   1730000 perm   1306 sec   (1324 perm/sec)   p_kst 5.780347e-07   p_cons 2.601156e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.120043e-06	k: 0	n:1740000
Cons ci ratio: 5.717829e-01	ci left: 1.935511e-05	ci right 3.526281e-05	k: 46	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
HRAS   1740000 perm   1320 sec   (1319 perm/sec)   p_kst 5.747126e-07   p_cons 2.643678e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.107929e-06	k: 0	n:1750000
Cons ci ratio: 5.657953e-01	ci left: 1.973368e-05	ci right 3.571415e-05	k: 47	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
HRAS   1750000 perm   1333 sec   (1312 perm/sec)   p_kst 5.714286e-07   p_cons 2.685714e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.095952e-06	k: 0	n:1760000
Cons ci ratio: 5.657954e-01	ci left: 1.962156e-05	ci right 3.551123e-05	k: 47	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
HRAS   1760000 perm   1347 sec   (1307 perm/sec)   p_kst 5.681818e-07   p_cons 2.670455e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.084111e-06	k: 0	n:1770000
Cons ci ratio: 5.657954e-01	ci left: 1.951070e-05	ci right 3.531060e-05	k: 47	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
HRAS   1770000 perm   1361 sec   (1301 perm/sec)   p_kst 5.649718e-07   p_cons 2.655367e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.072402e-06	k: 0	n:1780000
Cons ci ratio: 5.599921e-01	ci left: 1.988288e-05	ci right 3.575323e-05	k: 48	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
HRAS   1780000 perm   1375 sec   (1295 perm/sec)   p_kst 5.617978e-07   p_cons 2.696629e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.060824e-06	k: 0	n:1790000
Cons ci ratio: 5.599922e-01	ci left: 1.977180e-05	ci right 3.555350e-05	k: 48	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
HRAS   1790000 perm   1389 sec   (1289 perm/sec)   p_kst 5.586592e-07   p_cons 2.681564e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.049375e-06	k: 0	n:1800000
Cons ci ratio: 5.599922e-01	ci left: 1.966196e-05	ci right 3.535598e-05	k: 48	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
HRAS   1800000 perm   1403 sec   (1283 perm/sec)   p_kst 5.555556e-07   p_cons 2.666667e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.038053e-06	k: 0	n:1810000
Cons ci ratio: 5.543639e-01	ci left: 2.002795e-05	ci right 3.579023e-05	k: 49	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
HRAS   1810000 perm   1417 sec   (1278 perm/sec)   p_kst 5.524862e-07   p_cons 2.707182e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.026855e-06	k: 0	n:1820000
Cons ci ratio: 5.543639e-01	ci left: 1.991790e-05	ci right 3.559358e-05	k: 49	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
HRAS   1820000 perm   1431 sec   (1272 perm/sec)   p_kst 5.494505e-07   p_cons 2.692308e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.015779e-06	k: 0	n:1830000
Cons ci ratio: 5.543640e-01	ci left: 1.980906e-05	ci right 3.539908e-05	k: 49	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
HRAS   1830000 perm   1446 sec   (1266 perm/sec)   p_kst 5.464481e-07   p_cons 2.677596e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.004824e-06	k: 0	n:1840000
Cons ci ratio: 5.543640e-01	ci left: 1.970141e-05	ci right 3.520670e-05	k: 49	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
HRAS   1840000 perm   1461 sec   (1260 perm/sec)   p_kst 5.434783e-07   p_cons 2.663043e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.993987e-06	k: 0	n:1850000
Cons ci ratio: 5.543641e-01	ci left: 1.959491e-05	ci right 3.501639e-05	k: 49	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
HRAS   1850000 perm   1475 sec   (1254 perm/sec)   p_kst 5.405405e-07   p_cons 2.648649e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.983267e-06	k: 0	n:1860000
Cons ci ratio: 5.543641e-01	ci left: 1.948956e-05	ci right 3.482813e-05	k: 49	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
HRAS   1860000 perm   1490 sec   (1249 perm/sec)   p_kst 5.376344e-07   p_cons 2.634409e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.972661e-06	k: 0	n:1870000
Cons ci ratio: 5.489022e-01	ci left: 1.984550e-05	ci right 3.525053e-05	k: 50	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
HRAS   1870000 perm   1504 sec   (1243 perm/sec)   p_kst 5.347594e-07   p_cons 2.673797e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.962168e-06	k: 0	n:1880000
Cons ci ratio: 5.489022e-01	ci left: 1.973994e-05	ci right 3.506303e-05	k: 50	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
HRAS   1880000 perm   1518 sec   (1238 perm/sec)   p_kst 5.319149e-07   p_cons 2.659574e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.951786e-06	k: 0	n:1890000
Cons ci ratio: 5.489022e-01	ci left: 1.963549e-05	ci right 3.487751e-05	k: 50	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
HRAS   1890000 perm   1533 sec   (1233 perm/sec)   p_kst 5.291005e-07   p_cons 2.645503e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.941514e-06	k: 0	n:1900000
Cons ci ratio: 5.489023e-01	ci left: 1.953215e-05	ci right 3.469394e-05	k: 50	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
HRAS   1900000 perm   1548 sec   (1228 perm/sec)   p_kst 5.263158e-07   p_cons 2.631579e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.931349e-06	k: 0	n:1910000
Cons ci ratio: 5.489023e-01	ci left: 1.942988e-05	ci right 3.451230e-05	k: 50	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
HRAS   1910000 perm   1562 sec   (1223 perm/sec)   p_kst 5.235602e-07   p_cons 2.617801e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.921290e-06	k: 0	n:1920000
Cons ci ratio: 5.489024e-01	ci left: 1.932869e-05	ci right 3.433255e-05	k: 50	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
HRAS   1920000 perm   1577 sec   (1217 perm/sec)   p_kst 5.208333e-07   p_cons 2.604167e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.911335e-06	k: 0	n:1930000
Cons ci ratio: 5.489024e-01	ci left: 1.922854e-05	ci right 3.415466e-05	k: 50	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
HRAS   1930000 perm   1592 sec   (1212 perm/sec)   p_kst 5.181347e-07   p_cons 2.590674e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.901482e-06	k: 0	n:1940000
Cons ci ratio: 5.489024e-01	ci left: 1.912942e-05	ci right 3.397861e-05	k: 50	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
HRAS   1940000 perm   1608 sec   (1207 perm/sec)   p_kst 5.154639e-07   p_cons 2.577320e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.891731e-06	k: 0	n:1950000
Cons ci ratio: 5.489025e-01	ci left: 1.903132e-05	ci right 3.380436e-05	k: 50	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
HRAS   1950000 perm   1623 sec   (1202 perm/sec)   p_kst 5.128205e-07   p_cons 2.564103e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.882080e-06	k: 0	n:1960000
Cons ci ratio: 5.489025e-01	ci left: 1.893422e-05	ci right 3.363189e-05	k: 50	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
HRAS   1960000 perm   1638 sec   (1197 perm/sec)   p_kst 5.102041e-07   p_cons 2.551020e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.872526e-06	k: 0	n:1970000
Cons ci ratio: 5.435989e-01	ci left: 1.927562e-05	ci right 3.403823e-05	k: 51	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
HRAS   1970000 perm   1653 sec   (1192 perm/sec)   p_kst 5.076142e-07   p_cons 2.588832e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.863069e-06	k: 0	n:1980000
Cons ci ratio: 5.384461e-01	ci left: 1.961425e-05	ci right 3.443980e-05	k: 52	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
HRAS   1980000 perm   1668 sec   (1187 perm/sec)   p_kst 5.050505e-07   p_cons 2.626263e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.853707e-06	k: 0	n:1990000
Cons ci ratio: 5.334371e-01	ci left: 1.995013e-05	ci right 3.483669e-05	k: 53	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
HRAS   1990000 perm   1683 sec   (1182 perm/sec)   p_kst 5.025126e-07   p_cons 2.663317e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.844438e-06	k: 0	n:2000000
Cons ci ratio: 5.334371e-01	ci left: 1.985038e-05	ci right 3.466251e-05	k: 53	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
HRAS   2000000 perm   1698 sec   (1178 perm/sec)   p_kst 5.000000e-07   p_cons 2.650000e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.835262e-06	k: 0	n:2010000
Cons ci ratio: 5.238246e-01	ci left: 2.061376e-05	ci right 3.561680e-05	k: 55	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
HRAS   2010000 perm   1714 sec   (1173 perm/sec)   p_kst 4.975124e-07   p_cons 2.736318e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.826176e-06	k: 0	n:2020000
Cons ci ratio: 5.238246e-01	ci left: 2.051171e-05	ci right 3.544048e-05	k: 55	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
HRAS   2020000 perm   1729 sec   (1168 perm/sec)   p_kst 4.950495e-07   p_cons 2.722772e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.817180e-06	k: 0	n:2030000
Cons ci ratio: 5.238247e-01	ci left: 2.041067e-05	ci right 3.526590e-05	k: 55	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
HRAS   2030000 perm   1745 sec   (1163 perm/sec)   p_kst 4.926108e-07   p_cons 2.709360e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.808273e-06	k: 0	n:2040000
Cons ci ratio: 5.238247e-01	ci left: 2.031061e-05	ci right 3.509302e-05	k: 55	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
HRAS   2040000 perm   1761 sec   (1159 perm/sec)   p_kst 4.901961e-07   p_cons 2.696078e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.799452e-06	k: 0	n:2050000
Cons ci ratio: 5.238248e-01	ci left: 2.021154e-05	ci right 3.492184e-05	k: 55	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
HRAS   2050000 perm   1776 sec   (1154 perm/sec)   p_kst 4.878049e-07   p_cons 2.682927e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.790717e-06	k: 0	n:2060000
Cons ci ratio: 5.238248e-01	ci left: 2.011342e-05	ci right 3.475232e-05	k: 55	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
HRAS   2060000 perm   1792 sec   (1150 perm/sec)   p_kst 4.854369e-07   p_cons 2.669903e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.782066e-06	k: 0	n:2070000
Cons ci ratio: 5.238248e-01	ci left: 2.001626e-05	ci right 3.458443e-05	k: 55	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
HRAS   2070000 perm   1807 sec   (1145 perm/sec)   p_kst 4.830918e-07   p_cons 2.657005e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.773498e-06	k: 0	n:2080000
Cons ci ratio: 5.238249e-01	ci left: 1.992003e-05	ci right 3.441816e-05	k: 55	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
HRAS   2080000 perm   1823 sec   (1141 perm/sec)   p_kst 4.807692e-07   p_cons 2.644231e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.765013e-06	k: 0	n:2090000
Cons ci ratio: 5.238249e-01	ci left: 1.982471e-05	ci right 3.425348e-05	k: 55	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
HRAS   2090000 perm   1839 sec   (1137 perm/sec)   p_kst 4.784689e-07   p_cons 2.631579e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.756608e-06	k: 0	n:2100000
Cons ci ratio: 5.238249e-01	ci left: 1.973031e-05	ci right 3.409037e-05	k: 55	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
HRAS   2100000 perm   1854 sec   (1132 perm/sec)   p_kst 4.761905e-07   p_cons 2.619048e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.748283e-06	k: 0	n:2110000
Cons ci ratio: 5.238250e-01	ci left: 1.963680e-05	ci right 3.392880e-05	k: 55	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
HRAS   2110000 perm   1870 sec   (1128 perm/sec)   p_kst 4.739336e-07   p_cons 2.606635e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.740036e-06	k: 0	n:2120000
Cons ci ratio: 5.238250e-01	ci left: 1.954417e-05	ci right 3.376876e-05	k: 55	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
HRAS   2120000 perm   1886 sec   (1124 perm/sec)   p_kst 4.716981e-07   p_cons 2.594340e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.731867e-06	k: 0	n:2130000
Cons ci ratio: 5.192096e-01	ci left: 1.986006e-05	ci right 3.414102e-05	k: 56	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
HRAS   2130000 perm   1903 sec   (1120 perm/sec)   p_kst 4.694836e-07   p_cons 2.629108e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.723774e-06	k: 0	n:2140000
Cons ci ratio: 5.192096e-01	ci left: 1.976725e-05	ci right 3.398148e-05	k: 56	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
HRAS   2140000 perm   1919 sec   (1115 perm/sec)   p_kst 4.672897e-07   p_cons 2.616822e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.715756e-06	k: 0	n:2150000
Cons ci ratio: 5.192097e-01	ci left: 1.967531e-05	ci right 3.382343e-05	k: 56	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
HRAS   2150000 perm   1935 sec   (1111 perm/sec)   p_kst 4.651163e-07   p_cons 2.604651e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.707813e-06	k: 0	n:2160000
Cons ci ratio: 5.192097e-01	ci left: 1.958422e-05	ci right 3.366684e-05	k: 56	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
HRAS   2160000 perm   1951 sec   (1107 perm/sec)   p_kst 4.629630e-07   p_cons 2.592593e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.699943e-06	k: 0	n:2170000
Cons ci ratio: 5.192097e-01	ci left: 1.949397e-05	ci right 3.351169e-05	k: 56	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
HRAS   2170000 perm   1967 sec   (1103 perm/sec)   p_kst 4.608295e-07   p_cons 2.580645e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.692145e-06	k: 0	n:2180000
Cons ci ratio: 5.192098e-01	ci left: 1.940455e-05	ci right 3.335797e-05	k: 56	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
HRAS   2180000 perm   1984 sec   (1099 perm/sec)   p_kst 4.587156e-07   p_cons 2.568807e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.684418e-06	k: 0	n:2190000
Cons ci ratio: 5.192098e-01	ci left: 1.931595e-05	ci right 3.320565e-05	k: 56	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
HRAS   2190000 perm   2000 sec   (1095 perm/sec)   p_kst 4.566210e-07   p_cons 2.557078e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.676762e-06	k: 0	n:2200000
Cons ci ratio: 5.192098e-01	ci left: 1.922815e-05	ci right 3.305472e-05	k: 56	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
HRAS   2200000 perm   2017 sec   (1091 perm/sec)   p_kst 4.545455e-07   p_cons 2.545455e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.669175e-06	k: 0	n:2210000
Cons ci ratio: 5.147143e-01	ci left: 1.953456e-05	ci right 3.341621e-05	k: 57	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
HRAS   2210000 perm   2033 sec   (1087 perm/sec)   p_kst 4.524887e-07   p_cons 2.579186e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.661656e-06	k: 0	n:2220000
Cons ci ratio: 5.147144e-01	ci left: 1.944656e-05	ci right 3.326569e-05	k: 57	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
HRAS   2220000 perm   2050 sec   (1083 perm/sec)   p_kst 4.504505e-07   p_cons 2.567568e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.654205e-06	k: 0	n:2230000
Cons ci ratio: 5.103337e-01	ci left: 1.974976e-05	ci right 3.362250e-05	k: 58	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
HRAS   2230000 perm   2067 sec   (1079 perm/sec)   p_kst 4.484305e-07   p_cons 2.600897e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.646820e-06	k: 0	n:2240000
Cons ci ratio: 5.103337e-01	ci left: 1.966159e-05	ci right 3.347240e-05	k: 58	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
HRAS   2240000 perm   2084 sec   (1075 perm/sec)   p_kst 4.464286e-07   p_cons 2.589286e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.639501e-06	k: 0	n:2250000
Cons ci ratio: 5.060630e-01	ci left: 1.996163e-05	ci right 3.382463e-05	k: 59	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
HRAS   2250000 perm   2101 sec   (1071 perm/sec)   p_kst 4.444444e-07   p_cons 2.622222e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.632246e-06	k: 0	n:2260000
Cons ci ratio: 5.060630e-01	ci left: 1.987330e-05	ci right 3.367496e-05	k: 59	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
HRAS   2260000 perm   2118 sec   (1067 perm/sec)   p_kst 4.424779e-07   p_cons 2.610619e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.625056e-06	k: 0	n:2270000
Cons ci ratio: 5.060630e-01	ci left: 1.978575e-05	ci right 3.352661e-05	k: 59	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
HRAS   2270000 perm   2135 sec   (1063 perm/sec)   p_kst 4.405286e-07   p_cons 2.599119e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.617928e-06	k: 0	n:2280000
Cons ci ratio: 5.060631e-01	ci left: 1.969897e-05	ci right 3.337957e-05	k: 59	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
HRAS   2280000 perm   2152 sec   (1060 perm/sec)   p_kst 4.385965e-07   p_cons 2.587719e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.610863e-06	k: 0	n:2290000
Cons ci ratio: 5.060631e-01	ci left: 1.961295e-05	ci right 3.323381e-05	k: 59	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
HRAS   2290000 perm   2169 sec   (1056 perm/sec)   p_kst 4.366812e-07   p_cons 2.576419e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.603859e-06	k: 0	n:2300000
Cons ci ratio: 5.018978e-01	ci left: 1.990715e-05	ci right 3.357896e-05	k: 60	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
HRAS   2300000 perm   2186 sec   (1052 perm/sec)   p_kst 4.347826e-07   p_cons 2.608696e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.596916e-06	k: 0	n:2310000
Cons ci ratio: 4.978337e-01	ci left: 2.019926e-05	ci right 3.392067e-05	k: 61	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
HRAS   2310000 perm   2204 sec   (1048 perm/sec)   p_kst 4.329004e-07   p_cons 2.640693e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.590033e-06	k: 0	n:2320000
Cons ci ratio: 4.978337e-01	ci left: 2.011220e-05	ci right 3.377446e-05	k: 61	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
HRAS   2320000 perm   2221 sec   (1045 perm/sec)   p_kst 4.310345e-07   p_cons 2.629310e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.583209e-06	k: 0	n:2330000
Cons ci ratio: 4.978338e-01	ci left: 2.002588e-05	ci right 3.362951e-05	k: 61	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
HRAS   2330000 perm   2238 sec   (1041 perm/sec)   p_kst 4.291845e-07   p_cons 2.618026e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.576443e-06	k: 0	n:2340000
Cons ci ratio: 4.938668e-01	ci left: 2.031418e-05	ci right 3.396620e-05	k: 62	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
HRAS   2340000 perm   2256 sec   (1037 perm/sec)   p_kst 4.273504e-07   p_cons 2.649573e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.569735e-06	k: 0	n:2350000
Cons ci ratio: 4.938669e-01	ci left: 2.022774e-05	ci right 3.382166e-05	k: 62	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
HRAS   2350000 perm   2273 sec   (1034 perm/sec)   p_kst 4.255319e-07   p_cons 2.638298e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.563083e-06	k: 0	n:2360000
Cons ci ratio: 4.899933e-01	ci left: 2.051316e-05	ci right 3.415427e-05	k: 63	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
HRAS   2360000 perm   2291 sec   (1030 perm/sec)   p_kst 4.237288e-07   p_cons 2.669492e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.556488e-06	k: 0	n:2370000
Cons ci ratio: 4.862094e-01	ci left: 2.079660e-05	ci right 3.448366e-05	k: 64	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
HRAS   2370000 perm   2309 sec   (1027 perm/sec)   p_kst 4.219409e-07   p_cons 2.700422e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.549948e-06	k: 0	n:2380000
Cons ci ratio: 4.862094e-01	ci left: 2.070922e-05	ci right 3.433877e-05	k: 64	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
HRAS   2380000 perm   2327 sec   (1023 perm/sec)   p_kst 4.201681e-07   p_cons 2.689076e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.543463e-06	k: 0	n:2390000
Cons ci ratio: 4.862094e-01	ci left: 2.062257e-05	ci right 3.419509e-05	k: 64	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
HRAS   2390000 perm   2345 sec   (1019 perm/sec)   p_kst 4.184100e-07   p_cons 2.677824e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.537032e-06	k: 0	n:2400000
Cons ci ratio: 4.862095e-01	ci left: 2.053664e-05	ci right 3.405261e-05	k: 64	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
HRAS   2400000 perm   2363 sec   (1016 perm/sec)   p_kst 4.166667e-07   p_cons 2.666667e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.530654e-06	k: 0	n:2410000
Cons ci ratio: 4.862095e-01	ci left: 2.045143e-05	ci right 3.391132e-05	k: 64	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
HRAS   2410000 perm   2380 sec   (1012 perm/sec)   p_kst 4.149378e-07   p_cons 2.655602e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.524329e-06	k: 0	n:2420000
Cons ci ratio: 4.825120e-01	ci left: 2.072966e-05	ci right 3.423452e-05	k: 65	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
HRAS   2420000 perm   2399 sec   (1009 perm/sec)   p_kst 4.132231e-07   p_cons 2.685950e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.518056e-06	k: 0	n:2430000
Cons ci ratio: 4.825120e-01	ci left: 2.064435e-05	ci right 3.409363e-05	k: 65	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
HRAS   2430000 perm   2417 sec   (1005 perm/sec)   p_kst 4.115226e-07   p_cons 2.674897e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.511835e-06	k: 0	n:2440000
Cons ci ratio: 4.825120e-01	ci left: 2.055974e-05	ci right 3.395391e-05	k: 65	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
HRAS   2440000 perm   2435 sec   (1002 perm/sec)   p_kst 4.098361e-07   p_cons 2.663934e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.505664e-06	k: 0	n:2450000
Cons ci ratio: 4.825120e-01	ci left: 2.047582e-05	ci right 3.381532e-05	k: 65	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
HRAS   2450000 perm   2453 sec   (999 perm/sec)   p_kst 4.081633e-07   p_cons 2.653061e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.499543e-06	k: 0	n:2460000
Cons ci ratio: 4.825121e-01	ci left: 2.039259e-05	ci right 3.367786e-05	k: 65	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
HRAS   2460000 perm   2472 sec   (995 perm/sec)   p_kst 4.065041e-07   p_cons 2.642276e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.493472e-06	k: 0	n:2470000
Cons ci ratio: 4.825121e-01	ci left: 2.031003e-05	ci right 3.354151e-05	k: 65	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
HRAS   2470000 perm   2491 sec   (992 perm/sec)   p_kst 4.048583e-07   p_cons 2.631579e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.487450e-06	k: 0	n:2480000
Cons ci ratio: 4.825121e-01	ci left: 2.022813e-05	ci right 3.340627e-05	k: 65	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
HRAS   2480000 perm   2509 sec   (988 perm/sec)   p_kst 4.032258e-07   p_cons 2.620968e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.481477e-06	k: 0	n:2490000
Cons ci ratio: 4.825122e-01	ci left: 2.014689e-05	ci right 3.327210e-05	k: 65	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
HRAS   2490000 perm   2527 sec   (985 perm/sec)   p_kst 4.016064e-07   p_cons 2.610442e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.475551e-06	k: 0	n:2500000
Cons ci ratio: 4.825122e-01	ci left: 2.006631e-05	ci right 3.313902e-05	k: 65	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
HRAS   2500000 perm   2546 sec   (982 perm/sec)   p_kst 4.000000e-07   p_cons 2.600000e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.469672e-06	k: 0	n:2510000
Cons ci ratio: 4.825122e-01	ci left: 1.998636e-05	ci right 3.300699e-05	k: 65	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
HRAS   2510000 perm   2564 sec   (979 perm/sec)   p_kst 3.984064e-07   p_cons 2.589641e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.463840e-06	k: 0	n:2520000
Cons ci ratio: 4.825122e-01	ci left: 1.990705e-05	ci right 3.287601e-05	k: 65	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
HRAS   2520000 perm   2583 sec   (976 perm/sec)   p_kst 3.968254e-07   p_cons 2.579365e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.458054e-06	k: 0	n:2530000
Cons ci ratio: 4.788978e-01	ci left: 2.017571e-05	ci right 3.318889e-05	k: 66	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
HRAS   2530000 perm   2602 sec   (972 perm/sec)   p_kst 3.952569e-07   p_cons 2.608696e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.452314e-06	k: 0	n:2540000
Cons ci ratio: 4.788978e-01	ci left: 2.009627e-05	ci right 3.305822e-05	k: 66	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
HRAS   2540000 perm   2621 sec   (969 perm/sec)   p_kst 3.937008e-07   p_cons 2.598425e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.446618e-06	k: 0	n:2550000
Cons ci ratio: 4.788978e-01	ci left: 2.001746e-05	ci right 3.292858e-05	k: 66	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
HRAS   2550000 perm   2640 sec   (966 perm/sec)   p_kst 3.921569e-07   p_cons 2.588235e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.440968e-06	k: 0	n:2560000
Cons ci ratio: 4.788979e-01	ci left: 1.993927e-05	ci right 3.279996e-05	k: 66	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
HRAS   2560000 perm   2659 sec   (963 perm/sec)   p_kst 3.906250e-07   p_cons 2.578125e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.435361e-06	k: 0	n:2570000
Cons ci ratio: 4.788979e-01	ci left: 1.986169e-05	ci right 3.267233e-05	k: 66	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
HRAS   2570000 perm   2679 sec   (959 perm/sec)   p_kst 3.891051e-07   p_cons 2.568093e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.429797e-06	k: 0	n:2580000
Cons ci ratio: 4.788979e-01	ci left: 1.978470e-05	ci right 3.254569e-05	k: 66	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
HRAS   2580000 perm   2698 sec   (956 perm/sec)   p_kst 3.875969e-07   p_cons 2.558140e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.424277e-06	k: 0	n:2590000
Cons ci ratio: 4.788979e-01	ci left: 1.970831e-05	ci right 3.242004e-05	k: 66	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
HRAS   2590000 perm   2717 sec   (953 perm/sec)   p_kst 3.861004e-07   p_cons 2.548263e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.418799e-06	k: 0	n:2600000
Cons ci ratio: 4.788980e-01	ci left: 1.963251e-05	ci right 3.229534e-05	k: 66	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
HRAS   2600000 perm   2737 sec   (950 perm/sec)   p_kst 3.846154e-07   p_cons 2.538462e-05   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.413363e-06	k: 0	n:2610000
Cons ci ratio: 4.753635e-01	ci left: 1.989434e-05	ci right 3.260051e-05	k: 67	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
HRAS   2610000 perm   2756 sec   (947 perm/sec)   p_kst 3.831418e-07   p_cons 2.567050e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.407968e-06	k: 0	n:2620000
Cons ci ratio: 4.753636e-01	ci left: 1.981840e-05	ci right 3.247608e-05	k: 67	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
HRAS   2620000 perm   2775 sec   (944 perm/sec)   p_kst 3.816794e-07   p_cons 2.557252e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.402615e-06	k: 0	n:2630000
Cons ci ratio: 4.753636e-01	ci left: 1.974305e-05	ci right 3.235260e-05	k: 67	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
HRAS   2630000 perm   2795 sec   (941 perm/sec)   p_kst 3.802281e-07   p_cons 2.547529e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.397302e-06	k: 0	n:2640000
Cons ci ratio: 4.719063e-01	ci left: 2.000182e-05	ci right 3.265375e-05	k: 68	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
HRAS   2640000 perm   2814 sec   (938 perm/sec)   p_kst 3.787879e-07   p_cons 2.575758e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.392029e-06	k: 0	n:2650000
Cons ci ratio: 4.719063e-01	ci left: 1.992634e-05	ci right 3.253053e-05	k: 68	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
HRAS   2650000 perm   2833 sec   (935 perm/sec)   p_kst 3.773585e-07   p_cons 2.566038e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.386796e-06	k: 0	n:2660000
Cons ci ratio: 4.719063e-01	ci left: 1.985143e-05	ci right 3.240824e-05	k: 68	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
HRAS   2660000 perm   2853 sec   (932 perm/sec)   p_kst 3.759398e-07   p_cons 2.556391e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.381602e-06	k: 0	n:2670000
Cons ci ratio: 4.719064e-01	ci left: 1.977708e-05	ci right 3.228686e-05	k: 68	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
HRAS   2670000 perm   2873 sec   (929 perm/sec)   p_kst 3.745318e-07   p_cons 2.546816e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.376447e-06	k: 0	n:2680000
Cons ci ratio: 4.719064e-01	ci left: 1.970328e-05	ci right 3.216638e-05	k: 68	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
HRAS   2680000 perm   2893 sec   (926 perm/sec)   p_kst 3.731343e-07   p_cons 2.537313e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.371330e-06	k: 0	n:2690000
Cons ci ratio: 4.719064e-01	ci left: 1.963004e-05	ci right 3.204681e-05	k: 68	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
HRAS   2690000 perm   2912 sec   (924 perm/sec)   p_kst 3.717472e-07   p_cons 2.527881e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.366251e-06	k: 0	n:2700000
Cons ci ratio: 4.719064e-01	ci left: 1.955733e-05	ci right 3.192812e-05	k: 68	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
HRAS   2700000 perm   2932 sec   (921 perm/sec)   p_kst 3.703704e-07   p_cons 2.518519e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.361209e-06	k: 0	n:2710000
Cons ci ratio: 4.719064e-01	ci left: 1.948517e-05	ci right 3.181030e-05	k: 68	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
HRAS   2710000 perm   2953 sec   (918 perm/sec)   p_kst 3.690037e-07   p_cons 2.509225e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.356205e-06	k: 0	n:2720000
Cons ci ratio: 4.685235e-01	ci left: 1.973760e-05	ci right 3.210427e-05	k: 69	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
HRAS   2720000 perm   2973 sec   (915 perm/sec)   p_kst 3.676471e-07   p_cons 2.536765e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.351237e-06	k: 0	n:2730000
Cons ci ratio: 4.652123e-01	ci left: 1.998849e-05	ci right 3.239578e-05	k: 70	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
HRAS   2730000 perm   2993 sec   (912 perm/sec)   p_kst 3.663004e-07   p_cons 2.564103e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.346305e-06	k: 0	n:2740000
Cons ci ratio: 4.652123e-01	ci left: 1.991554e-05	ci right 3.227755e-05	k: 70	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
HRAS   2740000 perm   3013 sec   (909 perm/sec)   p_kst 3.649635e-07   p_cons 2.554745e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.341410e-06	k: 0	n:2750000
Cons ci ratio: 4.652123e-01	ci left: 1.984312e-05	ci right 3.216018e-05	k: 70	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
HRAS   2750000 perm   3034 sec   (907 perm/sec)   p_kst 3.636364e-07   p_cons 2.545455e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.336550e-06	k: 0	n:2760000
Cons ci ratio: 4.619703e-01	ci left: 2.009121e-05	ci right 3.244802e-05	k: 71	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
HRAS   2760000 perm   3054 sec   (904 perm/sec)   p_kst 3.623188e-07   p_cons 2.572464e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.331725e-06	k: 0	n:2770000
Cons ci ratio: 4.619703e-01	ci left: 2.001868e-05	ci right 3.233088e-05	k: 71	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
HRAS   2770000 perm   3075 sec   (901 perm/sec)   p_kst 3.610108e-07   p_cons 2.563177e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.326934e-06	k: 0	n:2780000
Cons ci ratio: 4.619704e-01	ci left: 1.994667e-05	ci right 3.221458e-05	k: 71	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
HRAS   2780000 perm   3095 sec   (898 perm/sec)   p_kst 3.597122e-07   p_cons 2.553957e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.322178e-06	k: 0	n:2790000
Cons ci ratio: 4.619704e-01	ci left: 1.987517e-05	ci right 3.209912e-05	k: 71	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
HRAS   2790000 perm   3116 sec   (895 perm/sec)   p_kst 3.584229e-07   p_cons 2.544803e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.317456e-06	k: 0	n:2800000
Cons ci ratio: 4.619704e-01	ci left: 1.980419e-05	ci right 3.198448e-05	k: 71	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
HRAS   2800000 perm   3137 sec   (893 perm/sec)   p_kst 3.571429e-07   p_cons 2.535714e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.312768e-06	k: 0	n:2810000
Cons ci ratio: 4.587953e-01	ci left: 2.004830e-05	ci right 3.226754e-05	k: 72	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
HRAS   2810000 perm   3158 sec   (890 perm/sec)   p_kst 3.558719e-07   p_cons 2.562278e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.308112e-06	k: 0	n:2820000
Cons ci ratio: 4.587953e-01	ci left: 1.997720e-05	ci right 3.215311e-05	k: 72	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
HRAS   2820000 perm   3179 sec   (887 perm/sec)   p_kst 3.546099e-07   p_cons 2.553191e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.303490e-06	k: 0	n:2830000
Cons ci ratio: 4.556847e-01	ci left: 2.021926e-05	ci right 3.243330e-05	k: 73	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
HRAS   2830000 perm   3200 sec   (884 perm/sec)   p_kst 3.533569e-07   p_cons 2.579505e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.298900e-06	k: 0	n:2840000
Cons ci ratio: 4.556847e-01	ci left: 2.014806e-05	ci right 3.231910e-05	k: 73	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
HRAS   2840000 perm   3220 sec   (882 perm/sec)   p_kst 3.521127e-07   p_cons 2.570423e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.294343e-06	k: 0	n:2850000
Cons ci ratio: 4.526366e-01	ci left: 2.038809e-05	ci right 3.259646e-05	k: 74	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
HRAS   2850000 perm   3241 sec   (879 perm/sec)   p_kst 3.508772e-07   p_cons 2.596491e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.289817e-06	k: 0	n:2860000
Cons ci ratio: 4.526366e-01	ci left: 2.031681e-05	ci right 3.248249e-05	k: 74	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
HRAS   2860000 perm   3263 sec   (877 perm/sec)   p_kst 3.496503e-07   p_cons 2.587413e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.285323e-06	k: 0	n:2870000
Cons ci ratio: 4.496488e-01	ci left: 2.055485e-05	ci right 3.275709e-05	k: 75	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
HRAS   2870000 perm   3284 sec   (874 perm/sec)   p_kst 3.484321e-07   p_cons 2.613240e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.280860e-06	k: 0	n:2880000
Cons ci ratio: 4.496488e-01	ci left: 2.048348e-05	ci right 3.264335e-05	k: 75	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
HRAS   2880000 perm   3305 sec   (871 perm/sec)   p_kst 3.472222e-07   p_cons 2.604167e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.276428e-06	k: 0	n:2890000
Cons ci ratio: 4.467194e-01	ci left: 2.071955e-05	ci right 3.291523e-05	k: 76	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
HRAS   2890000 perm   3327 sec   (869 perm/sec)   p_kst 3.460208e-07   p_cons 2.629758e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.272027e-06	k: 0	n:2900000
Cons ci ratio: 4.438466e-01	ci left: 2.095426e-05	ci right 3.318499e-05	k: 77	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
HRAS   2900000 perm   3348 sec   (866 perm/sec)   p_kst 3.448276e-07   p_cons 2.655172e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.267655e-06	k: 0	n:2910000
Cons ci ratio: 4.410284e-01	ci left: 2.118760e-05	ci right 3.345265e-05	k: 78	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
HRAS   2910000 perm   3370 sec   (864 perm/sec)   p_kst 3.436426e-07   p_cons 2.680412e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.263314e-06	k: 0	n:2920000
Cons ci ratio: 4.410284e-01	ci left: 2.111504e-05	ci right 3.333808e-05	k: 78	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
HRAS   2920000 perm   3391 sec   (861 perm/sec)   p_kst 3.424658e-07   p_cons 2.671233e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.259002e-06	k: 0	n:2930000
Cons ci ratio: 4.410284e-01	ci left: 2.104298e-05	ci right 3.322430e-05	k: 78	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
HRAS   2930000 perm   3413 sec   (858 perm/sec)   p_kst 3.412969e-07   p_cons 2.662116e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.254720e-06	k: 0	n:2940000
Cons ci ratio: 4.410285e-01	ci left: 2.097140e-05	ci right 3.311130e-05	k: 78	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
HRAS   2940000 perm   3435 sec   (856 perm/sec)   p_kst 3.401361e-07   p_cons 2.653061e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.250467e-06	k: 0	n:2950000
Cons ci ratio: 4.410285e-01	ci left: 2.090031e-05	ci right 3.299905e-05	k: 78	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
HRAS   2950000 perm   3457 sec   (853 perm/sec)   p_kst 3.389831e-07   p_cons 2.644068e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.246242e-06	k: 0	n:2960000
Cons ci ratio: 4.410285e-01	ci left: 2.082970e-05	ci right 3.288757e-05	k: 78	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
HRAS   2960000 perm   3478 sec   (851 perm/sec)   p_kst 3.378378e-07   p_cons 2.635135e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.242046e-06	k: 0	n:2970000
Cons ci ratio: 4.410285e-01	ci left: 2.075957e-05	ci right 3.277684e-05	k: 78	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
HRAS   2970000 perm   3500 sec   (848 perm/sec)   p_kst 3.367003e-07   p_cons 2.626263e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.237878e-06	k: 0	n:2980000
Cons ci ratio: 4.410285e-01	ci left: 2.068991e-05	ci right 3.266685e-05	k: 78	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
HRAS   2980000 perm   3522 sec   (846 perm/sec)   p_kst 3.355705e-07   p_cons 2.617450e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.233738e-06	k: 0	n:2990000
Cons ci ratio: 4.382634e-01	ci left: 2.091813e-05	ci right 3.292885e-05	k: 79	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
HRAS   2990000 perm   3544 sec   (844 perm/sec)   p_kst 3.344482e-07   p_cons 2.642140e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.229626e-06	k: 0	n:3000000
Cons ci ratio: 4.382634e-01	ci left: 2.084840e-05	ci right 3.281908e-05	k: 79	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
HRAS   3000000 perm   3565 sec   (841 perm/sec)   p_kst 3.333333e-07   p_cons 2.633333e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.225541e-06	k: 0	n:3010000
Cons ci ratio: 4.382634e-01	ci left: 2.077914e-05	ci right 3.271005e-05	k: 79	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
HRAS   3010000 perm   3588 sec   (839 perm/sec)   p_kst 3.322259e-07   p_cons 2.624585e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.221483e-06	k: 0	n:3020000
Cons ci ratio: 4.355496e-01	ci left: 2.100503e-05	ci right 3.296907e-05	k: 80	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
HRAS   3020000 perm   3610 sec   (837 perm/sec)   p_kst 3.311258e-07   p_cons 2.649007e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.217451e-06	k: 0	n:3030000
Cons ci ratio: 4.355497e-01	ci left: 2.093571e-05	ci right 3.286027e-05	k: 80	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
HRAS   3030000 perm   3632 sec   (834 perm/sec)   p_kst 3.300330e-07   p_cons 2.640264e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.213446e-06	k: 0	n:3040000
Cons ci ratio: 4.355497e-01	ci left: 2.086684e-05	ci right 3.275217e-05	k: 80	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
HRAS   3040000 perm   3655 sec   (832 perm/sec)   p_kst 3.289474e-07   p_cons 2.631579e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.209468e-06	k: 0	n:3050000
Cons ci ratio: 4.355497e-01	ci left: 2.079842e-05	ci right 3.264479e-05	k: 80	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
HRAS   3050000 perm   3678 sec   (829 perm/sec)   p_kst 3.278689e-07   p_cons 2.622951e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.205515e-06	k: 0	n:3060000
Cons ci ratio: 4.355497e-01	ci left: 2.073045e-05	ci right 3.253811e-05	k: 80	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
HRAS   3060000 perm   3700 sec   (827 perm/sec)   p_kst 3.267974e-07   p_cons 2.614379e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.201589e-06	k: 0	n:3070000
Cons ci ratio: 4.355497e-01	ci left: 2.066293e-05	ci right 3.243212e-05	k: 80	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
HRAS   3070000 perm   3723 sec   (825 perm/sec)   p_kst 3.257329e-07   p_cons 2.605863e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.197687e-06	k: 0	n:3080000
Cons ci ratio: 4.328857e-01	ci left: 2.088502e-05	ci right 3.268678e-05	k: 81	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
HRAS   3080000 perm   3746 sec   (822 perm/sec)   p_kst 3.246753e-07   p_cons 2.629870e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.193811e-06	k: 0	n:3090000
Cons ci ratio: 4.302701e-01	ci left: 2.110589e-05	ci right 3.293958e-05	k: 82	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
HRAS   3090000 perm   3769 sec   (820 perm/sec)   p_kst 3.236246e-07   p_cons 2.653722e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.189960e-06	k: 0	n:3100000
Cons ci ratio: 4.302701e-01	ci left: 2.103781e-05	ci right 3.283332e-05	k: 82	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
HRAS   3100000 perm   3792 sec   (818 perm/sec)   p_kst 3.225806e-07   p_cons 2.645161e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.186134e-06	k: 0	n:3110000
Cons ci ratio: 4.302701e-01	ci left: 2.097016e-05	ci right 3.272775e-05	k: 82	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
HRAS   3110000 perm   3814 sec   (815 perm/sec)   p_kst 3.215434e-07   p_cons 2.636656e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.182332e-06	k: 0	n:3120000
Cons ci ratio: 4.302701e-01	ci left: 2.090295e-05	ci right 3.262285e-05	k: 82	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
HRAS   3120000 perm   3837 sec   (813 perm/sec)   p_kst 3.205128e-07   p_cons 2.628205e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.178555e-06	k: 0	n:3130000
Cons ci ratio: 4.277013e-01	ci left: 2.112115e-05	ci right 3.287242e-05	k: 83	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
HRAS   3130000 perm   3861 sec   (811 perm/sec)   p_kst 3.194888e-07   p_cons 2.651757e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.174802e-06	k: 0	n:3140000
Cons ci ratio: 4.277013e-01	ci left: 2.105389e-05	ci right 3.276773e-05	k: 83	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
HRAS   3140000 perm   3884 sec   (808 perm/sec)   p_kst 3.184713e-07   p_cons 2.643312e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.171072e-06	k: 0	n:3150000
Cons ci ratio: 4.277013e-01	ci left: 2.098705e-05	ci right 3.266370e-05	k: 83	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
HRAS   3150000 perm   3908 sec   (806 perm/sec)   p_kst 3.174603e-07   p_cons 2.634921e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.167366e-06	k: 0	n:3160000
Cons ci ratio: 4.277013e-01	ci left: 2.092063e-05	ci right 3.256034e-05	k: 83	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
HRAS   3160000 perm   3931 sec   (804 perm/sec)   p_kst 3.164557e-07   p_cons 2.626582e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.163684e-06	k: 0	n:3170000
Cons ci ratio: 4.277013e-01	ci left: 2.085464e-05	ci right 3.245762e-05	k: 83	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
HRAS   3170000 perm   3954 sec   (802 perm/sec)   p_kst 3.154574e-07   p_cons 2.618297e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.160024e-06	k: 0	n:3180000
Cons ci ratio: 4.277013e-01	ci left: 2.078906e-05	ci right 3.235556e-05	k: 83	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
HRAS   3180000 perm   3978 sec   (799 perm/sec)   p_kst 3.144654e-07   p_cons 2.610063e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.156388e-06	k: 0	n:3190000
Cons ci ratio: 4.251780e-01	ci left: 2.100372e-05	ci right 3.260106e-05	k: 84	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
HRAS   3190000 perm   4001 sec   (797 perm/sec)   p_kst 3.134796e-07   p_cons 2.633229e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.152774e-06	k: 0	n:3200000
Cons ci ratio: 4.251780e-01	ci left: 2.093808e-05	ci right 3.249918e-05	k: 84	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
HRAS   3200000 perm   4024 sec   (795 perm/sec)   p_kst 3.125000e-07   p_cons 2.625000e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.149183e-06	k: 0	n:3210000
Cons ci ratio: 4.226987e-01	ci left: 2.115114e-05	ci right 3.274252e-05	k: 85	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
HRAS   3210000 perm   4048 sec   (793 perm/sec)   p_kst 3.115265e-07   p_cons 2.647975e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.145614e-06	k: 0	n:3220000
Cons ci ratio: 4.226988e-01	ci left: 2.108545e-05	ci right 3.264083e-05	k: 85	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
HRAS   3220000 perm   4072 sec   (791 perm/sec)   p_kst 3.105590e-07   p_cons 2.639752e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.142067e-06	k: 0	n:3230000
Cons ci ratio: 4.226988e-01	ci left: 2.102017e-05	ci right 3.253978e-05	k: 85	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
HRAS   3230000 perm   4096 sec   (789 perm/sec)   p_kst 3.095975e-07   p_cons 2.631579e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.138542e-06	k: 0	n:3240000
Cons ci ratio: 4.226988e-01	ci left: 2.095529e-05	ci right 3.243935e-05	k: 85	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
HRAS   3240000 perm   4119 sec   (787 perm/sec)   p_kst 3.086420e-07   p_cons 2.623457e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.135039e-06	k: 0	n:3250000
Cons ci ratio: 4.202624e-01	ci left: 2.116587e-05	ci right 3.267968e-05	k: 86	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
HRAS   3250000 perm   4143 sec   (784 perm/sec)   p_kst 3.076923e-07   p_cons 2.646154e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.131557e-06	k: 0	n:3260000
Cons ci ratio: 4.178677e-01	ci left: 2.137534e-05	ci right 3.291836e-05	k: 87	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
HRAS   3260000 perm   4167 sec   (782 perm/sec)   p_kst 3.067485e-07   p_cons 2.668712e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.128097e-06	k: 0	n:3270000
Cons ci ratio: 4.178677e-01	ci left: 2.130997e-05	ci right 3.281769e-05	k: 87	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
HRAS   3270000 perm   4190 sec   (780 perm/sec)   p_kst 3.058104e-07   p_cons 2.660550e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.124658e-06	k: 0	n:3280000
Cons ci ratio: 4.178677e-01	ci left: 2.124500e-05	ci right 3.271764e-05	k: 87	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
HRAS   3280000 perm   4214 sec   (778 perm/sec)   p_kst 3.048780e-07   p_cons 2.652439e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.121239e-06	k: 0	n:3290000
Cons ci ratio: 4.178678e-01	ci left: 2.118043e-05	ci right 3.261819e-05	k: 87	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
HRAS   3290000 perm   4238 sec   (776 perm/sec)   p_kst 3.039514e-07   p_cons 2.644377e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.117842e-06	k: 0	n:3300000
Cons ci ratio: 4.155135e-01	ci left: 2.138750e-05	ci right 3.285398e-05	k: 88	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
HRAS   3300000 perm   4263 sec   (774 perm/sec)   p_kst 3.030303e-07   p_cons 2.666667e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.114464e-06	k: 0	n:3310000
Cons ci ratio: 4.155135e-01	ci left: 2.132288e-05	ci right 3.275472e-05	k: 88	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
HRAS   3310000 perm   4287 sec   (772 perm/sec)   p_kst 3.021148e-07   p_cons 2.658610e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.111108e-06	k: 0	n:3320000
Cons ci ratio: 4.131986e-01	ci left: 2.152846e-05	ci right 3.298850e-05	k: 89	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
HRAS   3320000 perm   4311 sec   (770 perm/sec)   p_kst 3.012048e-07   p_cons 2.680723e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.107771e-06	k: 0	n:3330000
Cons ci ratio: 4.109220e-01	ci left: 2.173298e-05	ci right 3.322070e-05	k: 90	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
HRAS   3330000 perm   4336 sec   (768 perm/sec)   p_kst 3.003003e-07   p_cons 2.702703e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.104454e-06	k: 0	n:3340000
Cons ci ratio: 4.109220e-01	ci left: 2.166791e-05	ci right 3.312124e-05	k: 90	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
HRAS   3340000 perm   4360 sec   (766 perm/sec)   p_kst 2.994012e-07   p_cons 2.694611e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.101157e-06	k: 0	n:3350000
Cons ci ratio: 4.109220e-01	ci left: 2.160323e-05	ci right 3.302237e-05	k: 90	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
HRAS   3350000 perm   4384 sec   (764 perm/sec)   p_kst 2.985075e-07   p_cons 2.686567e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.097880e-06	k: 0	n:3360000
Cons ci ratio: 4.109220e-01	ci left: 2.153893e-05	ci right 3.292409e-05	k: 90	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
HRAS   3360000 perm   4409 sec   (762 perm/sec)   p_kst 2.976190e-07   p_cons 2.678571e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.094622e-06	k: 0	n:3370000
Cons ci ratio: 4.109220e-01	ci left: 2.147502e-05	ci right 3.282639e-05	k: 90	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
HRAS   3370000 perm   4433 sec   (760 perm/sec)   p_kst 2.967359e-07   p_cons 2.670623e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.091384e-06	k: 0	n:3380000
Cons ci ratio: 4.109221e-01	ci left: 2.141148e-05	ci right 3.272927e-05	k: 90	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
HRAS   3380000 perm   4458 sec   (758 perm/sec)   p_kst 2.958580e-07   p_cons 2.662722e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.088164e-06	k: 0	n:3390000
Cons ci ratio: 4.086826e-01	ci left: 2.161289e-05	ci right 3.295796e-05	k: 91	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
HRAS   3390000 perm   4482 sec   (756 perm/sec)   p_kst 2.949853e-07   p_cons 2.684366e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.084964e-06	k: 0	n:3400000
Cons ci ratio: 4.064794e-01	ci left: 2.181328e-05	ci right 3.318514e-05	k: 92	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
HRAS   3400000 perm   4507 sec   (754 perm/sec)   p_kst 2.941176e-07   p_cons 2.705882e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.081782e-06	k: 0	n:3410000
Cons ci ratio: 4.064795e-01	ci left: 2.174932e-05	ci right 3.308783e-05	k: 92	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
HRAS   3410000 perm   4532 sec   (752 perm/sec)   p_kst 2.932551e-07   p_cons 2.697947e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.078619e-06	k: 0	n:3420000
Cons ci ratio: 4.043115e-01	ci left: 2.194830e-05	ci right 3.331314e-05	k: 93	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
HRAS   3420000 perm   4557 sec   (750 perm/sec)   p_kst 2.923977e-07   p_cons 2.719298e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.075474e-06	k: 0	n:3430000
Cons ci ratio: 4.043115e-01	ci left: 2.188431e-05	ci right 3.321602e-05	k: 93	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
HRAS   3430000 perm   4582 sec   (749 perm/sec)   p_kst 2.915452e-07   p_cons 2.711370e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.072348e-06	k: 0	n:3440000
Cons ci ratio: 4.043115e-01	ci left: 2.182069e-05	ci right 3.311946e-05	k: 93	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
HRAS   3440000 perm   4607 sec   (747 perm/sec)   p_kst 2.906977e-07   p_cons 2.703488e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.069240e-06	k: 0	n:3450000
Cons ci ratio: 4.043116e-01	ci left: 2.175745e-05	ci right 3.302346e-05	k: 93	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
HRAS   3450000 perm   4632 sec   (745 perm/sec)   p_kst 2.898551e-07   p_cons 2.695652e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.066150e-06	k: 0	n:3460000
Cons ci ratio: 4.043116e-01	ci left: 2.169456e-05	ci right 3.292802e-05	k: 93	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
HRAS   3460000 perm   4658 sec   (743 perm/sec)   p_kst 2.890173e-07   p_cons 2.687861e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.063077e-06	k: 0	n:3470000
Cons ci ratio: 4.043116e-01	ci left: 2.163204e-05	ci right 3.283312e-05	k: 93	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
HRAS   3470000 perm   4684 sec   (741 perm/sec)   p_kst 2.881844e-07   p_cons 2.680115e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.060022e-06	k: 0	n:3480000
Cons ci ratio: 4.043116e-01	ci left: 2.156988e-05	ci right 3.273878e-05	k: 93	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
HRAS   3480000 perm   4709 sec   (739 perm/sec)   p_kst 2.873563e-07   p_cons 2.672414e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.056985e-06	k: 0	n:3490000
Cons ci ratio: 4.043116e-01	ci left: 2.150808e-05	ci right 3.264497e-05	k: 93	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
HRAS   3490000 perm   4735 sec   (737 perm/sec)   p_kst 2.865330e-07   p_cons 2.664756e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.053965e-06	k: 0	n:3500000
Cons ci ratio: 4.043116e-01	ci left: 2.144662e-05	ci right 3.255170e-05	k: 93	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
HRAS   3500000 perm   4760 sec   (735 perm/sec)   p_kst 2.857143e-07   p_cons 2.657143e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.050962e-06	k: 0	n:3510000
Cons ci ratio: 4.043117e-01	ci left: 2.138552e-05	ci right 3.245896e-05	k: 93	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
HRAS   3510000 perm   4786 sec   (733 perm/sec)   p_kst 2.849003e-07   p_cons 2.649573e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.047977e-06	k: 0	n:3520000
Cons ci ratio: 4.021780e-01	ci left: 2.158004e-05	ci right 3.267950e-05	k: 94	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
HRAS   3520000 perm   4812 sec   (731 perm/sec)   p_kst 2.840909e-07   p_cons 2.670455e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.045008e-06	k: 0	n:3530000
Cons ci ratio: 4.021780e-01	ci left: 2.151891e-05	ci right 3.258693e-05	k: 94	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
HRAS   3530000 perm   4838 sec   (730 perm/sec)   p_kst 2.832861e-07   p_cons 2.662890e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.042056e-06	k: 0	n:3540000
Cons ci ratio: 4.021781e-01	ci left: 2.145812e-05	ci right 3.249487e-05	k: 94	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
HRAS   3540000 perm   4865 sec   (728 perm/sec)   p_kst 2.824859e-07   p_cons 2.655367e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.039120e-06	k: 0	n:3550000
Cons ci ratio: 4.021781e-01	ci left: 2.139768e-05	ci right 3.240334e-05	k: 94	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
HRAS   3550000 perm   4891 sec   (726 perm/sec)   p_kst 2.816901e-07   p_cons 2.647887e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.036202e-06	k: 0	n:3560000
Cons ci ratio: 4.021781e-01	ci left: 2.133757e-05	ci right 3.231232e-05	k: 94	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
HRAS   3560000 perm   4917 sec   (724 perm/sec)   p_kst 2.808989e-07   p_cons 2.640449e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.033299e-06	k: 0	n:3570000
Cons ci ratio: 4.021781e-01	ci left: 2.127780e-05	ci right 3.222181e-05	k: 94	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
HRAS   3570000 perm   4944 sec   (722 perm/sec)   p_kst 2.801120e-07   p_cons 2.633053e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.030413e-06	k: 0	n:3580000
Cons ci ratio: 3.980102e-01	ci left: 2.172081e-05	ci right 3.274639e-05	k: 96	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
HRAS   3580000 perm   4970 sec   (720 perm/sec)   p_kst 2.793296e-07   p_cons 2.681564e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.027542e-06	k: 0	n:3590000
Cons ci ratio: 3.980103e-01	ci left: 2.166030e-05	ci right 3.265518e-05	k: 96	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
HRAS   3590000 perm   4996 sec   (719 perm/sec)   p_kst 2.785515e-07   p_cons 2.674095e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.024688e-06	k: 0	n:3600000
Cons ci ratio: 3.980103e-01	ci left: 2.160014e-05	ci right 3.256447e-05	k: 96	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
HRAS   3600000 perm   5023 sec   (717 perm/sec)   p_kst 2.777778e-07   p_cons 2.666667e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.021850e-06	k: 0	n:3610000
Cons ci ratio: 3.980103e-01	ci left: 2.154030e-05	ci right 3.247426e-05	k: 96	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
HRAS   3610000 perm   5049 sec   (715 perm/sec)   p_kst 2.770083e-07   p_cons 2.659280e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.019027e-06	k: 0	n:3620000
Cons ci ratio: 3.980103e-01	ci left: 2.148080e-05	ci right 3.238455e-05	k: 96	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
HRAS   3620000 perm   5075 sec   (713 perm/sec)   p_kst 2.762431e-07   p_cons 2.651934e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.016220e-06	k: 0	n:3630000
Cons ci ratio: 3.980103e-01	ci left: 2.142162e-05	ci right 3.229534e-05	k: 96	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
HRAS   3630000 perm   5102 sec   (712 perm/sec)   p_kst 2.754821e-07   p_cons 2.644628e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.013428e-06	k: 0	n:3640000
Cons ci ratio: 3.959744e-01	ci left: 2.161007e-05	ci right 3.250863e-05	k: 97	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
HRAS   3640000 perm   5128 sec   (710 perm/sec)   p_kst 2.747253e-07   p_cons 2.664835e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.010651e-06	k: 0	n:3650000
Cons ci ratio: 3.919946e-01	ci left: 2.204452e-05	ci right 3.302153e-05	k: 99	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
HRAS   3650000 perm   5155 sec   (708 perm/sec)   p_kst 2.739726e-07   p_cons 2.712329e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.007890e-06	k: 0	n:3660000
Cons ci ratio: 3.919946e-01	ci left: 2.198429e-05	ci right 3.293131e-05	k: 99	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
HRAS   3660000 perm   5182 sec   (706 perm/sec)   p_kst 2.732240e-07   p_cons 2.704918e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.005144e-06	k: 0	n:3670000
Cons ci ratio: 3.900492e-01	ci left: 2.217008e-05	ci right 3.314072e-05	k: 100	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
HRAS   3670000 perm   5208 sec   (705 perm/sec)   p_kst 2.724796e-07   p_cons 2.724796e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.002412e-06	k: 0	n:3680000
Cons ci ratio: 3.881324e-01	ci left: 2.235499e-05	ci right 3.334886e-05	k: 101	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
HRAS   3680000 perm   5235 sec   (703 perm/sec)   p_kst 2.717391e-07   p_cons 2.744565e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.996958e-07	k: 0	n:3690000
Cons ci ratio: 3.881324e-01	ci left: 2.229441e-05	ci right 3.325848e-05	k: 101	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
HRAS   3690000 perm   5262 sec   (701 perm/sec)   p_kst 2.710027e-07   p_cons 2.737127e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.969940e-07	k: 0	n:3700000
Cons ci ratio: 3.881324e-01	ci left: 2.223415e-05	ci right 3.316859e-05	k: 101	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
HRAS   3700000 perm   5288 sec   (700 perm/sec)   p_kst 2.702703e-07   p_cons 2.729730e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.943066e-07	k: 0	n:3710000
Cons ci ratio: 3.862437e-01	ci left: 2.241752e-05	ci right 3.337485e-05	k: 102	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
HRAS   3710000 perm   5315 sec   (698 perm/sec)   p_kst 2.695418e-07   p_cons 2.749326e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.916338e-07	k: 0	n:3720000
Cons ci ratio: 3.843822e-01	ci left: 2.260004e-05	ci right 3.357986e-05	k: 103	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
HRAS   3720000 perm   5343 sec   (696 perm/sec)   p_kst 2.688172e-07   p_cons 2.768817e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.889752e-07	k: 0	n:3730000
Cons ci ratio: 3.843822e-01	ci left: 2.253945e-05	ci right 3.348984e-05	k: 103	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
HRAS   3730000 perm   5369 sec   (695 perm/sec)   p_kst 2.680965e-07   p_cons 2.761394e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.863309e-07	k: 0	n:3740000
Cons ci ratio: 3.825474e-01	ci left: 2.272079e-05	ci right 3.369333e-05	k: 104	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
HRAS   3740000 perm   5397 sec   (693 perm/sec)   p_kst 2.673797e-07   p_cons 2.780749e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.837007e-07	k: 0	n:3750000
Cons ci ratio: 3.825474e-01	ci left: 2.266020e-05	ci right 3.360348e-05	k: 104	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
HRAS   3750000 perm   5424 sec   (691 perm/sec)   p_kst 2.666667e-07   p_cons 2.773333e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.810845e-07	k: 0	n:3760000
Cons ci ratio: 3.825474e-01	ci left: 2.259993e-05	ci right 3.351411e-05	k: 104	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
HRAS   3760000 perm   5452 sec   (690 perm/sec)   p_kst 2.659574e-07   p_cons 2.765957e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.784821e-07	k: 0	n:3770000
Cons ci ratio: 3.825475e-01	ci left: 2.253998e-05	ci right 3.342521e-05	k: 104	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
HRAS   3770000 perm   5479 sec   (688 perm/sec)   p_kst 2.652520e-07   p_cons 2.758621e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.758936e-07	k: 0	n:3780000
Cons ci ratio: 3.825475e-01	ci left: 2.248035e-05	ci right 3.333678e-05	k: 104	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
HRAS   3780000 perm   5507 sec   (686 perm/sec)   p_kst 2.645503e-07   p_cons 2.751323e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.733186e-07	k: 0	n:3790000
Cons ci ratio: 3.807387e-01	ci left: 2.265958e-05	ci right 3.353787e-05	k: 105	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
HRAS   3790000 perm   5534 sec   (685 perm/sec)   p_kst 2.638522e-07   p_cons 2.770449e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.707573e-07	k: 0	n:3800000
Cons ci ratio: 3.807387e-01	ci left: 2.259995e-05	ci right 3.344961e-05	k: 105	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
HRAS   3800000 perm   5562 sec   (683 perm/sec)   p_kst 2.631579e-07   p_cons 2.763158e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.682094e-07	k: 0	n:3810000
Cons ci ratio: 3.807387e-01	ci left: 2.254063e-05	ci right 3.336182e-05	k: 105	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
HRAS   3810000 perm   5589 sec   (682 perm/sec)   p_kst 2.624672e-07   p_cons 2.755906e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.656748e-07	k: 0	n:3820000
Cons ci ratio: 3.807387e-01	ci left: 2.248162e-05	ci right 3.327449e-05	k: 105	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
HRAS   3820000 perm   5617 sec   (680 perm/sec)   p_kst 2.617801e-07   p_cons 2.748691e-05   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.631534e-07	k: 0	n:3830000
Cons ci ratio: 1.841668e-01	ci left: 1.073859e-04	ci right 1.294129e-04	k: 452	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
HRAS   3830000 perm   5645 sec   (678 perm/sec)   p_kst 2.610966e-07   p_cons 1.180157e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.606452e-07	k: 0	n:3840000
Cons ci ratio: 1.839638e-01	ci left: 1.073546e-04	ci right 1.293483e-04	k: 453	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
HRAS   3840000 perm   5672 sec   (677 perm/sec)   p_kst 2.604167e-07   p_cons 1.179688e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.581500e-07	k: 0	n:3850000
Cons ci ratio: 1.837616e-01	ci left: 1.073236e-04	ci right 1.292840e-04	k: 454	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
HRAS   3850000 perm   5700 sec   (675 perm/sec)   p_kst 2.597403e-07   p_cons 1.179221e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.556678e-07	k: 0	n:3860000
Cons ci ratio: 1.833590e-01	ci left: 1.075398e-04	ci right 1.294910e-04	k: 456	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
HRAS   3860000 perm   5728 sec   (674 perm/sec)   p_kst 2.590674e-07   p_cons 1.181347e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.531984e-07	k: 0	n:3870000
Cons ci ratio: 1.831587e-01	ci left: 1.075085e-04	ci right 1.294267e-04	k: 457	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
HRAS   3870000 perm   5756 sec   (672 perm/sec)   p_kst 2.583979e-07   p_cons 1.180879e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.507417e-07	k: 0	n:3880000
Cons ci ratio: 1.827601e-01	ci left: 1.077233e-04	ci right 1.296321e-04	k: 459	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
HRAS   3880000 perm   5785 sec   (671 perm/sec)   p_kst 2.577320e-07   p_cons 1.182990e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.482976e-07	k: 0	n:3890000
Cons ci ratio: 1.823641e-01	ci left: 1.079370e-04	ci right 1.298365e-04	k: 461	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
HRAS   3890000 perm   5813 sec   (669 perm/sec)   p_kst 2.570694e-07   p_cons 1.185090e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.458661e-07	k: 0	n:3900000
Cons ci ratio: 1.819706e-01	ci left: 1.081497e-04	ci right 1.300398e-04	k: 463	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
HRAS   3900000 perm   5842 sec   (668 perm/sec)   p_kst 2.564103e-07   p_cons 1.187179e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.434470e-07	k: 0	n:3910000
Cons ci ratio: 1.811912e-01	ci left: 1.088496e-04	ci right 1.307766e-04	k: 467	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
HRAS   3910000 perm   5870 sec   (666 perm/sec)   p_kst 2.557545e-07   p_cons 1.194373e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.410402e-07	k: 0	n:3920000
Cons ci ratio: 1.811912e-01	ci left: 1.085719e-04	ci right 1.304430e-04	k: 467	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
HRAS   3920000 perm   5899 sec   (665 perm/sec)   p_kst 2.551020e-07   p_cons 1.191327e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.386457e-07	k: 0	n:3930000
Cons ci ratio: 1.809980e-01	ci left: 1.085386e-04	ci right 1.303771e-04	k: 468	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
HRAS   3930000 perm   5927 sec   (663 perm/sec)   p_kst 2.544529e-07   p_cons 1.190840e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.362634e-07	k: 0	n:3940000
Cons ci ratio: 1.808053e-01	ci left: 1.085054e-04	ci right 1.303115e-04	k: 469	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
HRAS   3940000 perm   5955 sec   (662 perm/sec)   p_kst 2.538071e-07   p_cons 1.190355e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.338931e-07	k: 0	n:3950000
Cons ci ratio: 1.808053e-01	ci left: 1.082307e-04	ci right 1.299816e-04	k: 469	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
HRAS   3950000 perm   5983 sec   (660 perm/sec)   p_kst 2.531646e-07   p_cons 1.187342e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.315348e-07	k: 0	n:3960000
Cons ci ratio: 1.806133e-01	ci left: 1.081985e-04	ci right 1.299173e-04	k: 470	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
HRAS   3960000 perm   6011 sec   (659 perm/sec)   p_kst 2.525253e-07   p_cons 1.186869e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.291883e-07	k: 0	n:3970000
Cons ci ratio: 1.804219e-01	ci left: 1.081665e-04	ci right 1.298533e-04	k: 471	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
HRAS   3970000 perm   6039 sec   (657 perm/sec)   p_kst 2.518892e-07   p_cons 1.186398e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.268537e-07	k: 0	n:3980000
Cons ci ratio: 1.798512e-01	ci left: 1.086145e-04	ci right 1.303147e-04	k: 474	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
HRAS   3980000 perm   6069 sec   (656 perm/sec)   p_kst 2.512563e-07   p_cons 1.190955e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.245308e-07	k: 0	n:3990000
Cons ci ratio: 1.796622e-01	ci left: 1.085816e-04	ci right 1.302500e-04	k: 475	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
HRAS   3990000 perm   6098 sec   (654 perm/sec)   p_kst 2.506266e-07   p_cons 1.190476e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.222194e-07	k: 0	n:4000000
Cons ci ratio: 1.796622e-01	ci left: 1.083102e-04	ci right 1.299244e-04	k: 475	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
HRAS   4000000 perm   6127 sec   (653 perm/sec)   p_kst 2.500000e-07   p_cons 1.187500e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.199196e-07	k: 0	n:4010000
Cons ci ratio: 1.794738e-01	ci left: 1.082782e-04	ci right 1.298610e-04	k: 476	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
HRAS   4010000 perm   6156 sec   (651 perm/sec)   p_kst 2.493766e-07   p_cons 1.187032e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.176313e-07	k: 0	n:4020000
Cons ci ratio: 1.794738e-01	ci left: 1.080089e-04	ci right 1.295379e-04	k: 476	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
HRAS   4020000 perm   6184 sec   (650 perm/sec)   p_kst 2.487562e-07   p_cons 1.184080e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.153543e-07	k: 0	n:4030000
Cons ci ratio: 1.789120e-01	ci left: 1.084519e-04	ci right 1.299943e-04	k: 479	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
HRAS   4030000 perm   6213 sec   (649 perm/sec)   p_kst 2.481390e-07   p_cons 1.188586e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.130886e-07	k: 0	n:4040000
Cons ci ratio: 1.787260e-01	ci left: 1.084199e-04	ci right 1.299311e-04	k: 480	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
HRAS   4040000 perm   6242 sec   (647 perm/sec)   p_kst 2.475248e-07   p_cons 1.188119e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.108340e-07	k: 0	n:4050000
Cons ci ratio: 1.787260e-01	ci left: 1.081522e-04	ci right 1.296103e-04	k: 480	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
HRAS   4050000 perm   6272 sec   (646 perm/sec)   p_kst 2.469136e-07   p_cons 1.185185e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.085906e-07	k: 0	n:4060000
Cons ci ratio: 1.785405e-01	ci left: 1.081211e-04	ci right 1.295483e-04	k: 481	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
HRAS   4060000 perm   6302 sec   (644 perm/sec)   p_kst 2.463054e-07   p_cons 1.184729e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.063582e-07	k: 0	n:4070000
Cons ci ratio: 1.776215e-01	ci left: 1.090292e-04	ci right 1.305132e-04	k: 486	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
HRAS   4070000 perm   6332 sec   (643 perm/sec)   p_kst 2.457002e-07   p_cons 1.194103e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.041367e-07	k: 0	n:4080000
Cons ci ratio: 1.774394e-01	ci left: 1.089962e-04	ci right 1.304493e-04	k: 487	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
HRAS   4080000 perm   6361 sec   (641 perm/sec)   p_kst 2.450980e-07   p_cons 1.193627e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.019261e-07	k: 0	n:4090000
Cons ci ratio: 1.774395e-01	ci left: 1.087297e-04	ci right 1.301304e-04	k: 487	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
HRAS   4090000 perm   6391 sec   (640 perm/sec)   p_kst 2.444988e-07   p_cons 1.190709e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.997263e-07	k: 0	n:4100000
Cons ci ratio: 1.770769e-01	ci left: 1.089307e-04	ci right 1.303224e-04	k: 489	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
HRAS   4100000 perm   6420 sec   (639 perm/sec)   p_kst 2.439024e-07   p_cons 1.192683e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.975372e-07	k: 0	n:4110000
Cons ci ratio: 1.770770e-01	ci left: 1.086656e-04	ci right 1.300053e-04	k: 489	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
HRAS   4110000 perm   6450 sec   (637 perm/sec)   p_kst 2.433090e-07   p_cons 1.189781e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.953587e-07	k: 0	n:4120000
Cons ci ratio: 1.768966e-01	ci left: 1.086338e-04	ci right 1.299433e-04	k: 490	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
HRAS   4120000 perm   6480 sec   (636 perm/sec)   p_kst 2.427184e-07   p_cons 1.189320e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.931908e-07	k: 0	n:4130000
Cons ci ratio: 1.763586e-01	ci left: 1.090651e-04	ci right 1.303871e-04	k: 493	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
HRAS   4130000 perm   6511 sec   (634 perm/sec)   p_kst 2.421308e-07   p_cons 1.193705e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.910333e-07	k: 0	n:4140000
Cons ci ratio: 1.763586e-01	ci left: 1.088016e-04	ci right 1.300721e-04	k: 493	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
HRAS   4140000 perm   6542 sec   (633 perm/sec)   p_kst 2.415459e-07   p_cons 1.190821e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.888862e-07	k: 0	n:4150000
Cons ci ratio: 1.754727e-01	ci left: 1.096912e-04	ci right 1.310165e-04	k: 498	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
HRAS   4150000 perm   6571 sec   (632 perm/sec)   p_kst 2.409639e-07   p_cons 1.200000e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.867495e-07	k: 0	n:4160000
Cons ci ratio: 1.752972e-01	ci left: 1.096574e-04	ci right 1.309525e-04	k: 499	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
HRAS   4160000 perm   6601 sec   (630 perm/sec)   p_kst 2.403846e-07   p_cons 1.199519e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.846230e-07	k: 0	n:4170000
Cons ci ratio: 1.752972e-01	ci left: 1.093944e-04	ci right 1.306385e-04	k: 499	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
HRAS   4170000 perm   6631 sec   (629 perm/sec)   p_kst 2.398082e-07   p_cons 1.196643e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.825067e-07	k: 0	n:4180000
Cons ci ratio: 1.752972e-01	ci left: 1.091327e-04	ci right 1.303260e-04	k: 499	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
HRAS   4180000 perm   6661 sec   (628 perm/sec)   p_kst 2.392344e-07   p_cons 1.193780e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.804004e-07	k: 0	n:4190000
Cons ci ratio: 1.751222e-01	ci left: 1.091004e-04	ci right 1.302640e-04	k: 500	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
HRAS   4190000 perm   6691 sec   (626 perm/sec)   p_kst 2.386635e-07   p_cons 1.193317e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.783042e-07	k: 0	n:4200000
Cons ci ratio: 1.751222e-01	ci left: 1.088407e-04	ci right 1.299539e-04	k: 500	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
HRAS   4200000 perm   6721 sec   (625 perm/sec)   p_kst 2.380952e-07   p_cons 1.190476e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.762180e-07	k: 0	n:4210000
Cons ci ratio: 1.747737e-01	ci left: 1.090364e-04	ci right 1.301410e-04	k: 502	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
HRAS   4210000 perm   6751 sec   (624 perm/sec)   p_kst 2.375297e-07   p_cons 1.192399e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.741417e-07	k: 0	n:4220000
Cons ci ratio: 1.747737e-01	ci left: 1.087780e-04	ci right 1.298326e-04	k: 502	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
HRAS   4220000 perm   6781 sec   (622 perm/sec)   p_kst 2.369668e-07   p_cons 1.189573e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.720751e-07	k: 0	n:4230000
Cons ci ratio: 1.746003e-01	ci left: 1.087469e-04	ci right 1.297724e-04	k: 503	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
HRAS   4230000 perm   6812 sec   (621 perm/sec)   p_kst 2.364066e-07   p_cons 1.189125e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.700184e-07	k: 0	n:4240000
Cons ci ratio: 1.742548e-01	ci left: 1.089416e-04	ci right 1.299587e-04	k: 505	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
HRAS   4240000 perm   6843 sec   (620 perm/sec)   p_kst 2.358491e-07   p_cons 1.191038e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.679713e-07	k: 0	n:4250000
Cons ci ratio: 1.739115e-01	ci left: 1.091353e-04	ci right 1.301439e-04	k: 507	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
HRAS   4250000 perm   6874 sec   (618 perm/sec)   p_kst 2.352941e-07   p_cons 1.192941e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.659338e-07	k: 0	n:4260000
Cons ci ratio: 1.737405e-01	ci left: 1.091037e-04	ci right 1.300834e-04	k: 508	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
HRAS   4260000 perm   6904 sec   (617 perm/sec)   p_kst 2.347418e-07   p_cons 1.192488e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.639058e-07	k: 0	n:4270000
Cons ci ratio: 1.735701e-01	ci left: 1.090722e-04	ci right 1.300231e-04	k: 509	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
HRAS   4270000 perm   6936 sec   (616 perm/sec)   p_kst 2.341920e-07   p_cons 1.192037e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.618874e-07	k: 0	n:4280000
Cons ci ratio: 1.734002e-01	ci left: 1.090408e-04	ci right 1.299631e-04	k: 510	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
HRAS   4280000 perm   6967 sec   (614 perm/sec)   p_kst 2.336449e-07   p_cons 1.191589e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.598783e-07	k: 0	n:4290000
Cons ci ratio: 1.734002e-01	ci left: 1.087866e-04	ci right 1.296601e-04	k: 510	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
HRAS   4290000 perm   6998 sec   (613 perm/sec)   p_kst 2.331002e-07   p_cons 1.188811e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.578786e-07	k: 0	n:4300000
Cons ci ratio: 1.734003e-01	ci left: 1.085337e-04	ci right 1.293586e-04	k: 510	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
HRAS   4300000 perm   7030 sec   (612 perm/sec)   p_kst 2.325581e-07   p_cons 1.186047e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.558881e-07	k: 0	n:4310000
Cons ci ratio: 1.732309e-01	ci left: 1.085038e-04	ci right 1.293005e-04	k: 511	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
HRAS   4310000 perm   7061 sec   (610 perm/sec)   p_kst 2.320186e-07   p_cons 1.185615e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.539069e-07	k: 0	n:4320000
Cons ci ratio: 1.727255e-01	ci left: 1.089170e-04	ci right 1.297257e-04	k: 514	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
HRAS   4320000 perm   7093 sec   (609 perm/sec)   p_kst 2.314815e-07   p_cons 1.189815e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.519348e-07	k: 0	n:4330000
Cons ci ratio: 1.723911e-01	ci left: 1.091074e-04	ci right 1.299079e-04	k: 516	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
HRAS   4330000 perm   7124 sec   (608 perm/sec)   p_kst 2.309469e-07   p_cons 1.191686e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.499719e-07	k: 0	n:4340000
Cons ci ratio: 1.722246e-01	ci left: 1.090765e-04	ci right 1.298490e-04	k: 517	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
HRAS   4340000 perm   7155 sec   (607 perm/sec)   p_kst 2.304147e-07   p_cons 1.191244e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.480179e-07	k: 0	n:4350000
Cons ci ratio: 1.720586e-01	ci left: 1.090457e-04	ci right 1.297902e-04	k: 518	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
HRAS   4350000 perm   7186 sec   (605 perm/sec)   p_kst 2.298851e-07   p_cons 1.190805e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.460729e-07	k: 0	n:4360000
Cons ci ratio: 1.717280e-01	ci left: 1.092346e-04	ci right 1.299710e-04	k: 520	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
HRAS   4360000 perm   7218 sec   (604 perm/sec)   p_kst 2.293578e-07   p_cons 1.192661e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.441368e-07	k: 0	n:4370000
Cons ci ratio: 1.713994e-01	ci left: 1.094226e-04	ci right 1.301509e-04	k: 522	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
HRAS   4370000 perm   7250 sec   (603 perm/sec)   p_kst 2.288330e-07   p_cons 1.194508e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.422096e-07	k: 0	n:4380000
Cons ci ratio: 1.712357e-01	ci left: 1.093913e-04	ci right 1.300918e-04	k: 523	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
HRAS   4380000 perm   7282 sec   (602 perm/sec)   p_kst 2.283105e-07   p_cons 1.194064e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.402911e-07	k: 0	n:4390000
Cons ci ratio: 1.707476e-01	ci left: 1.097963e-04	ci right 1.305081e-04	k: 526	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
HRAS   4390000 perm   7313 sec   (600 perm/sec)   p_kst 2.277904e-07   p_cons 1.198178e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.383813e-07	k: 0	n:4400000
Cons ci ratio: 1.707476e-01	ci left: 1.095468e-04	ci right 1.302114e-04	k: 526	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
HRAS   4400000 perm   7345 sec   (599 perm/sec)   p_kst 2.272727e-07   p_cons 1.195455e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.364803e-07	k: 0	n:4410000
Cons ci ratio: 1.705859e-01	ci left: 1.095154e-04	ci right 1.301526e-04	k: 527	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
HRAS   4410000 perm   7377 sec   (598 perm/sec)   p_kst 2.267574e-07   p_cons 1.195011e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.345878e-07	k: 0	n:4420000
Cons ci ratio: 1.704246e-01	ci left: 1.094842e-04	ci right 1.300940e-04	k: 528	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
HRAS   4420000 perm   7409 sec   (597 perm/sec)   p_kst 2.262443e-07   p_cons 1.194570e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.327038e-07	k: 0	n:4430000
Cons ci ratio: 1.704246e-01	ci left: 1.092371e-04	ci right 1.298004e-04	k: 528	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
HRAS   4430000 perm   7440 sec   (595 perm/sec)   p_kst 2.257336e-07   p_cons 1.191874e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.308284e-07	k: 0	n:4440000
Cons ci ratio: 1.702637e-01	ci left: 1.092067e-04	ci right 1.297429e-04	k: 529	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
HRAS   4440000 perm   7473 sec   (594 perm/sec)   p_kst 2.252252e-07   p_cons 1.191441e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.289613e-07	k: 0	n:4450000
Cons ci ratio: 1.702638e-01	ci left: 1.089613e-04	ci right 1.294513e-04	k: 529	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
HRAS   4450000 perm   7504 sec   (593 perm/sec)   p_kst 2.247191e-07   p_cons 1.188764e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.271027e-07	k: 0	n:4460000
Cons ci ratio: 1.702638e-01	ci left: 1.087170e-04	ci right 1.291610e-04	k: 529	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
HRAS   4460000 perm   7537 sec   (592 perm/sec)   p_kst 2.242152e-07   p_cons 1.186099e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.252523e-07	k: 0	n:4470000
Cons ci ratio: 1.699434e-01	ci left: 1.089021e-04	ci right 1.293386e-04	k: 531	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
HRAS   4470000 perm   7569 sec   (591 perm/sec)   p_kst 2.237136e-07   p_cons 1.187919e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.234103e-07	k: 0	n:4480000
Cons ci ratio: 1.697839e-01	ci left: 1.088728e-04	ci right 1.292825e-04	k: 532	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
HRAS   4480000 perm   7601 sec   (589 perm/sec)   p_kst 2.232143e-07   p_cons 1.187500e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.215764e-07	k: 0	n:4490000
Cons ci ratio: 1.697840e-01	ci left: 1.086303e-04	ci right 1.289946e-04	k: 532	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
HRAS   4490000 perm   7634 sec   (588 perm/sec)   p_kst 2.227171e-07   p_cons 1.184855e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.197507e-07	k: 0	n:4500000
Cons ci ratio: 1.696249e-01	ci left: 1.086017e-04	ci right 1.289396e-04	k: 533	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
HRAS   4500000 perm   7666 sec   (587 perm/sec)   p_kst 2.222222e-07   p_cons 1.184444e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.179330e-07	k: 0	n:4510000
Cons ci ratio: 1.693081e-01	ci left: 1.087855e-04	ci right 1.291160e-04	k: 535	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
HRAS   4510000 perm   7699 sec   (586 perm/sec)   p_kst 2.217295e-07   p_cons 1.186253e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.161234e-07	k: 0	n:4520000
Cons ci ratio: 1.691504e-01	ci left: 1.087567e-04	ci right 1.290609e-04	k: 536	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
HRAS   4520000 perm   7731 sec   (585 perm/sec)   p_kst 2.212389e-07   p_cons 1.185841e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.143218e-07	k: 0	n:4530000
Cons ci ratio: 1.689931e-01	ci left: 1.087280e-04	ci right 1.290061e-04	k: 537	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
HRAS   4530000 perm   7763 sec   (584 perm/sec)   p_kst 2.207506e-07   p_cons 1.185430e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.125282e-07	k: 0	n:4540000
Cons ci ratio: 1.689932e-01	ci left: 1.084886e-04	ci right 1.287219e-04	k: 537	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
HRAS   4540000 perm   7797 sec   (582 perm/sec)   p_kst 2.202643e-07   p_cons 1.182819e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.107424e-07	k: 0	n:4550000
Cons ci ratio: 1.686799e-01	ci left: 1.086711e-04	ci right 1.288971e-04	k: 539	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
HRAS   4550000 perm   7829 sec   (581 perm/sec)   p_kst 2.197802e-07   p_cons 1.184615e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.089645e-07	k: 0	n:4560000
Cons ci ratio: 1.685239e-01	ci left: 1.086428e-04	ci right 1.288430e-04	k: 540	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
HRAS   4560000 perm   7862 sec   (580 perm/sec)   p_kst 2.192982e-07   p_cons 1.184211e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.071943e-07	k: 0	n:4570000
Cons ci ratio: 1.682133e-01	ci left: 1.088243e-04	ci right 1.290171e-04	k: 542	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
HRAS   4570000 perm   7895 sec   (579 perm/sec)   p_kst 2.188184e-07   p_cons 1.185996e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.054319e-07	k: 0	n:4580000
Cons ci ratio: 1.680586e-01	ci left: 1.087959e-04	ci right 1.289630e-04	k: 543	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
HRAS   4580000 perm   7928 sec   (578 perm/sec)   p_kst 2.183406e-07   p_cons 1.185590e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.036771e-07	k: 0	n:4590000
Cons ci ratio: 1.680586e-01	ci left: 1.085588e-04	ci right 1.286820e-04	k: 543	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
HRAS   4590000 perm   7962 sec   (576 perm/sec)   p_kst 2.178649e-07   p_cons 1.183007e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.019300e-07	k: 0	n:4600000
Cons ci ratio: 1.679044e-01	ci left: 1.085311e-04	ci right 1.286288e-04	k: 544	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
HRAS   4600000 perm   7995 sec   (575 perm/sec)   p_kst 2.173913e-07   p_cons 1.182609e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.001904e-07	k: 0	n:4610000
Cons ci ratio: 1.675971e-01	ci left: 1.087113e-04	ci right 1.288018e-04	k: 546	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
HRAS   4610000 perm   8028 sec   (574 perm/sec)   p_kst 2.169197e-07   p_cons 1.184382e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.984584e-07	k: 0	n:4620000
Cons ci ratio: 1.672916e-01	ci left: 1.088907e-04	ci right 1.289740e-04	k: 548	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
HRAS   4620000 perm   8061 sec   (573 perm/sec)   p_kst 2.164502e-07   p_cons 1.186147e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.967339e-07	k: 0	n:4630000
Cons ci ratio: 1.669877e-01	ci left: 1.090694e-04	ci right 1.291455e-04	k: 550	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
HRAS   4630000 perm   8094 sec   (572 perm/sec)   p_kst 2.159827e-07   p_cons 1.187905e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.950168e-07	k: 0	n:4640000
Cons ci ratio: 1.669877e-01	ci left: 1.088344e-04	ci right 1.288672e-04	k: 550	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
HRAS   4640000 perm   8127 sec   (571 perm/sec)   p_kst 2.155172e-07   p_cons 1.185345e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.933071e-07	k: 0	n:4650000
Cons ci ratio: 1.665349e-01	ci left: 1.092186e-04	ci right 1.292621e-04	k: 553	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
HRAS   4650000 perm   8160 sec   (570 perm/sec)   p_kst 2.150538e-07   p_cons 1.189247e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.916047e-07	k: 0	n:4660000
Cons ci ratio: 1.660858e-01	ci left: 1.096012e-04	ci right 1.296552e-04	k: 556	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
HRAS   4660000 perm   8194 sec   (569 perm/sec)   p_kst 2.145923e-07   p_cons 1.193133e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.899096e-07	k: 0	n:4670000
Cons ci ratio: 1.659369e-01	ci left: 1.095717e-04	ci right 1.296006e-04	k: 557	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
HRAS   4670000 perm   8227 sec   (568 perm/sec)   p_kst 2.141328e-07   p_cons 1.192719e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.882218e-07	k: 0	n:4680000
Cons ci ratio: 1.656403e-01	ci left: 1.097472e-04	ci right 1.297688e-04	k: 559	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
HRAS   4680000 perm   8261 sec   (567 perm/sec)   p_kst 2.136752e-07   p_cons 1.194444e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.865412e-07	k: 0	n:4690000
Cons ci ratio: 1.653453e-01	ci left: 1.099220e-04	ci right 1.299362e-04	k: 561	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
HRAS   4690000 perm   8295 sec   (565 perm/sec)   p_kst 2.132196e-07   p_cons 1.196162e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.848677e-07	k: 0	n:4700000
Cons ci ratio: 1.651984e-01	ci left: 1.098921e-04	ci right 1.298813e-04	k: 562	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
HRAS   4700000 perm   8329 sec   (564 perm/sec)   p_kst 2.127660e-07   p_cons 1.195745e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.832013e-07	k: 0	n:4710000
Cons ci ratio: 1.649057e-01	ci left: 1.100659e-04	ci right 1.300477e-04	k: 564	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
HRAS   4710000 perm   8363 sec   (563 perm/sec)   p_kst 2.123142e-07   p_cons 1.197452e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.815419e-07	k: 0	n:4720000
Cons ci ratio: 1.647600e-01	ci left: 1.100358e-04	ci right 1.299927e-04	k: 565	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
HRAS   4720000 perm   8397 sec   (562 perm/sec)   p_kst 2.118644e-07   p_cons 1.197034e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.798896e-07	k: 0	n:4730000
Cons ci ratio: 1.643250e-01	ci left: 1.104113e-04	ci right 1.303782e-04	k: 568	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
HRAS   4730000 perm   8431 sec   (561 perm/sec)   p_kst 2.114165e-07   p_cons 1.200846e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.782443e-07	k: 0	n:4740000
Cons ci ratio: 1.638935e-01	ci left: 1.107853e-04	ci right 1.307621e-04	k: 571	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
HRAS   4740000 perm   8465 sec   (560 perm/sec)   p_kst 2.109705e-07   p_cons 1.204641e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.766059e-07	k: 0	n:4750000
Cons ci ratio: 1.637505e-01	ci left: 1.107539e-04	ci right 1.307059e-04	k: 572	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
HRAS   4750000 perm   8500 sec   (559 perm/sec)   p_kst 2.105263e-07   p_cons 1.204211e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.749744e-07	k: 0	n:4760000
Cons ci ratio: 1.636078e-01	ci left: 1.107227e-04	ci right 1.306500e-04	k: 573	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
HRAS   4760000 perm   8534 sec   (558 perm/sec)   p_kst 2.100840e-07   p_cons 1.203782e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.733497e-07	k: 0	n:4770000
Cons ci ratio: 1.633235e-01	ci left: 1.108927e-04	ci right 1.308125e-04	k: 575	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
HRAS   4770000 perm   8567 sec   (557 perm/sec)   p_kst 2.096436e-07   p_cons 1.205451e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.717318e-07	k: 0	n:4780000
Cons ci ratio: 1.630406e-01	ci left: 1.110621e-04	ci right 1.309744e-04	k: 577	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
HRAS   4780000 perm   8602 sec   (556 perm/sec)   p_kst 2.092050e-07   p_cons 1.207113e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.701207e-07	k: 0	n:4790000
Cons ci ratio: 1.628998e-01	ci left: 1.110305e-04	ci right 1.309182e-04	k: 578	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
HRAS   4790000 perm   8636 sec   (555 perm/sec)   p_kst 2.087683e-07   p_cons 1.206681e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.685163e-07	k: 0	n:4800000
Cons ci ratio: 1.627593e-01	ci left: 1.109990e-04	ci right 1.308623e-04	k: 579	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
HRAS   4800000 perm   8670 sec   (554 perm/sec)   p_kst 2.083333e-07   p_cons 1.206250e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.669185e-07	k: 0	n:4810000
Cons ci ratio: 1.626192e-01	ci left: 1.109677e-04	ci right 1.308066e-04	k: 580	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
HRAS   4810000 perm   8706 sec   (553 perm/sec)   p_kst 2.079002e-07   p_cons 1.205821e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.653274e-07	k: 0	n:4820000
Cons ci ratio: 1.624794e-01	ci left: 1.109365e-04	ci right 1.307511e-04	k: 581	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
HRAS   4820000 perm   8740 sec   (551 perm/sec)   p_kst 2.074689e-07   p_cons 1.205394e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.637429e-07	k: 0	n:4830000
Cons ci ratio: 1.617859e-01	ci left: 1.117000e-04	ci right 1.315575e-04	k: 586	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
HRAS   4830000 perm   8774 sec   (550 perm/sec)   p_kst 2.070393e-07   p_cons 1.213251e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.621649e-07	k: 0	n:4840000
Cons ci ratio: 1.616482e-01	ci left: 1.116675e-04	ci right 1.315007e-04	k: 587	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
HRAS   4840000 perm   8809 sec   (549 perm/sec)   p_kst 2.066116e-07   p_cons 1.212810e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.605934e-07	k: 0	n:4850000
Cons ci ratio: 1.612374e-01	ci left: 1.120308e-04	ci right 1.318731e-04	k: 590	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
HRAS   4850000 perm   8843 sec   (548 perm/sec)   p_kst 2.061856e-07   p_cons 1.216495e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.590284e-07	k: 0	n:4860000
Cons ci ratio: 1.611012e-01	ci left: 1.119977e-04	ci right 1.318158e-04	k: 591	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
HRAS   4860000 perm   8878 sec   (547 perm/sec)   p_kst 2.057613e-07   p_cons 1.216049e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.574698e-07	k: 0	n:4870000
Cons ci ratio: 1.609653e-01	ci left: 1.119648e-04	ci right 1.317587e-04	k: 592	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
HRAS   4870000 perm   8913 sec   (546 perm/sec)   p_kst 2.053388e-07   p_cons 1.215606e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.559176e-07	k: 0	n:4880000
Cons ci ratio: 1.605596e-01	ci left: 1.123254e-04	ci right 1.321282e-04	k: 595	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
HRAS   4880000 perm   8948 sec   (545 perm/sec)   p_kst 2.049180e-07   p_cons 1.219262e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.543718e-07	k: 0	n:4890000
Cons ci ratio: 1.604251e-01	ci left: 1.122920e-04	ci right 1.320707e-04	k: 596	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
HRAS   4890000 perm   8982 sec   (544 perm/sec)   p_kst 2.044990e-07   p_cons 1.218814e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.528323e-07	k: 0	n:4900000
Cons ci ratio: 1.601571e-01	ci left: 1.124546e-04	ci right 1.322257e-04	k: 598	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
HRAS   4900000 perm   9017 sec   (543 perm/sec)   p_kst 2.040816e-07   p_cons 1.220408e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.512990e-07	k: 0	n:4910000
Cons ci ratio: 1.601571e-01	ci left: 1.122256e-04	ci right 1.319564e-04	k: 598	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
HRAS   4910000 perm   9052 sec   (542 perm/sec)   p_kst 2.036660e-07   p_cons 1.217923e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.497720e-07	k: 0	n:4920000
Cons ci ratio: 1.600236e-01	ci left: 1.121926e-04	ci right 1.318996e-04	k: 599	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
HRAS   4920000 perm   9088 sec   (541 perm/sec)   p_kst 2.032520e-07   p_cons 1.217480e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.482511e-07	k: 0	n:4930000
Cons ci ratio: 1.598904e-01	ci left: 1.121597e-04	ci right 1.318430e-04	k: 600	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
HRAS   4930000 perm   9123 sec   (540 perm/sec)   p_kst 2.028398e-07   p_cons 1.217039e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.467365e-07	k: 0	n:4940000
Cons ci ratio: 1.597575e-01	ci left: 1.121270e-04	ci right 1.317866e-04	k: 601	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
HRAS   4940000 perm   9159 sec   (539 perm/sec)   p_kst 2.024291e-07   p_cons 1.216599e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.452279e-07	k: 0	n:4950000
Cons ci ratio: 1.594928e-01	ci left: 1.122884e-04	ci right 1.319405e-04	k: 603	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
HRAS   4950000 perm   9194 sec   (538 perm/sec)   p_kst 2.020202e-07   p_cons 1.218182e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.437254e-07	k: 0	n:4960000
Cons ci ratio: 1.594928e-01	ci left: 1.120620e-04	ci right 1.316745e-04	k: 603	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
HRAS   4960000 perm   9230 sec   (537 perm/sec)   p_kst 2.016129e-07   p_cons 1.215726e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.422290e-07	k: 0	n:4970000
Cons ci ratio: 1.592294e-01	ci left: 1.122229e-04	ci right 1.318280e-04	k: 605	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
HRAS   4970000 perm   9266 sec   (536 perm/sec)   p_kst 2.012072e-07   p_cons 1.217304e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.407386e-07	k: 0	n:4980000
Cons ci ratio: 1.589673e-01	ci left: 1.123832e-04	ci right 1.319809e-04	k: 607	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
HRAS   4980000 perm   9301 sec   (535 perm/sec)   p_kst 2.008032e-07   p_cons 1.218876e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.392541e-07	k: 0	n:4990000
Cons ci ratio: 1.589673e-01	ci left: 1.121580e-04	ci right 1.317164e-04	k: 607	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
HRAS   4990000 perm   9336 sec   (534 perm/sec)   p_kst 2.004008e-07   p_cons 1.216433e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.377756e-07	k: 0	n:5000000
Cons ci ratio: 1.972288e-01	ci left: 7.121056e-05	ci right 8.697801e-05	k: 394	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
HRAS   5000000 perm   9372 sec   (534 perm/sec)   p_kst 2.000000e-07   p_cons 7.880000e-05   p_joint 0

Outputting figure to mutsig2_images.part000000000081/HRAS.12_653_5000000_2e-07_7.88e-05_0.png
                gene_name: HRAS
               theta_stop: 3.9 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 7.88e-05 
      ci_cons_bounds_left: 7.12e-05 
     ci_cons_bounds_right: 8.70e-05 
                  p_joint: 0 
     ci_joint_bounds_left: 0 
    ci_joint_bounds_right: 7.38e-07 

Current progress: 50 percent done.
HRNR
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.778118e-03	ci left: 9.935271e-01	ci right 9.963728e-01	k: 9951	n:10000
KS ci ratio: 3.846421e-02	ci left: 4.995504e-01	ci right 5.192441e-01	k: 5094	n:10000
HRNR   10000 perm   2 sec   (4780 perm/sec)   p_kst 5.094000e-01   p_cons 9.951000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000081/HRNR.2_8561_10000_0.5094_0.9951_1.png
                gene_name: HRNR
               theta_stop: 0.038 
                    nperm: 10000 
                     p_ks: 0.51 
        ci_ks_bounds_left: 0.50 
       ci_ks_bounds_right: 0.52 
                   p_cons: 1.00 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000081
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 81 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1703>
Subject: Job 8704235: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1703>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000082> was used as the working directory.
Started at Thu Nov 15 19:33:22 2012
Results reported at Thu Nov 15 19:42:39 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000082.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000082.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 82  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000082.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    589.56 sec.
    Max Memory :      5904 MB
    Max Swap   :      8492 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
82
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 82
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 82: processing genes 7329 - 7418
Calculating significance of each gene.
Using projection method.
7329	HSPA8	2.140612e-01
7330	HSPA9	1
7331	HSPB1	1
7332	HSPB11	1
7333	HSPB2	1
7334	HSPB3	1
7335	HSPB7	1
7336	HSPB8	1
7337	HSPB9	1
7338	HSPBAP1	1
7339	HSPBP1	1
7340	HSPC159	1
7341	HSPD1	1
7342	HSPE1	1
7343	HSPG2	1
7344	HSPH1	2.770494e-01
7345	HTATIP2	1
7346	HTATSF1	1
7347	HTN1	1
7348	HTN3	1
7349	HTR1A	3.970249e-02
7350	HTR1B	1
7351	HTR1D	1
7352	HTR1E	1
7353	HTR1F	1
7354	HTR2A	1
7355	HTR2B	2.052539e-01
7356	HTR2C	1
7357	HTR3A	7.674631e-02
7358	HTR3B	1
7359	HTR3C	1.356040e-02
7360	HTR3D	1
7361	HTR3E	1
7362	HTR4	1
7363	HTR5A	1.175808e-01
7364	HTR6	1
7365	HTR7	1
7366	HTRA1	1
7367	HTRA2	1
7368	HTRA3	8.056932e-03
7369	HTRA4	5.860405e-02
7370	HTT	6.268331e-01
7371	HUNK	1
7372	HUS1	1
7373	HUS1B	1
7374	HUWE1	8.635181e-01
7375	HVCN1	1
7376	HYAL1	1
7377	HYAL2	1
7378	HYAL3	1
7379	HYAL4	1
7380	HYDIN	7.292340e-01
7381	HYI	1
7382	HYLS1	1
7383	HYOU1	1
7384	IAH1	1
7385	IAPP	1
7386	IARS	9.962312e-03
7387	IARS2	1
7388	IBSP	1
7389	IBTK	1
7390	ICA1	1
7391	ICA1L	1
7392	ICAM1	1
7393	ICAM2	1
7394	ICAM3	1
7395	ICAM4	1
7396	ICAM5	1
7397	ICK	1
7398	ICMT	9.237447e-02
7399	ICOS	1
7400	ICOSLG	1
7401	ICT1	1
7402	ID1	1
7403	ID2	6.509422e-02
7404	ID3	1
7405	ID4	1
7406	IDE	1.118501e-01
7407	IDH1	1
7408	IDH2	1
7409	IDH3A	1
7410	IDH3B	1.699401e-01
7411	IDH3G	1
7412	IDI1	1
7413	IDI2	1
7414	IDO1	2.331950e-02
7415	IDO2	1
7416	IDS	1.258125e-01
7417	IDUA	1
7418	IER2	1
Done

Running MutSig 2:
Scatter job 82: processing genes 7329 - 7418
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
IARS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.035677e-01	ci left: 2.943789e-03	ci right 5.558045e-03	k: 41	n:10000
Cons ci ratio: 7.991661e-01	ci left: 1.458544e-03	ci right 3.449143e-03	k: 23	n:10000
KS ci ratio: 7.150104e-02	ci left: 2.227686e-01	ci right 2.393884e-01	k: 2310	n:10000
IARS   10000 perm   2 sec   (5036 perm/sec)   p_kst 2.310000e-01   p_cons 2.300000e-03   p_joint 4.100000e-03

Joint ci ratio: 5.327106e-01	ci left: 1.985643e-03	ci right 3.464850e-03	k: 53	n:20000
Cons ci ratio: 6.042186e-01	ci left: 1.471505e-03	ci right 2.780040e-03	k: 41	n:20000
KS ci ratio: 5.089600e-02	ci left: 2.228940e-01	ci right 2.345849e-01	k: 4574	n:20000
IARS   20000 perm   7 sec   (2871 perm/sec)   p_kst 2.287000e-01   p_cons 2.050000e-03   p_joint 2.650000e-03

Joint ci ratio: 2.769537e-01	ci left: 5.715107e-03	ci right 7.582366e-03	k: 198	n:30000
Cons ci ratio: 3.933177e-01	ci left: 2.652810e-03	ci right 3.979598e-03	k: 98	n:30000
KS ci ratio: 4.198711e-02	ci left: 2.203841e-01	ci right 2.298692e-01	k: 6753	n:30000
IARS   30000 perm   9 sec   (3205 perm/sec)   p_kst 2.251000e-01   p_cons 3.266667e-03   p_joint 6.600000e-03

Joint ci ratio: 2.006657e-01	ci left: 8.501350e-03	ci right 1.042088e-02	k: 377	n:40000
Cons ci ratio: 3.343300e-01	ci left: 2.853357e-03	ci right 4.020568e-03	k: 136	n:40000
KS ci ratio: 3.555849e-02	ci left: 2.288642e-01	ci right 2.371746e-01	k: 9320	n:40000
IARS   40000 perm   12 sec   (3379 perm/sec)   p_kst 2.330000e-01   p_cons 3.400000e-03   p_joint 9.425000e-03

Joint ci ratio: 2.087961e-01	ci left: 6.268997e-03	ci right 7.749110e-03	k: 349	n:50000
Cons ci ratio: 2.992539e-01	ci left: 2.908789e-03	ci right 3.950180e-03	k: 170	n:50000
KS ci ratio: 3.178539e-02	ci left: 2.295189e-01	ci right 2.369521e-01	k: 11661	n:50000
IARS   50000 perm   14 sec   (3469 perm/sec)   p_kst 2.332200e-01   p_cons 3.400000e-03   p_joint 6.980000e-03

Joint ci ratio: 2.017927e-01	ci left: 5.619218e-03	ci right 6.895914e-03	k: 374	n:60000
Cons ci ratio: 2.644030e-01	ci left: 3.167712e-03	ci right 4.147930e-03	k: 218	n:60000
KS ci ratio: 2.890340e-02	ci left: 2.312305e-01	ci right 2.380285e-01	k: 14077	n:60000
IARS   60000 perm   17 sec   (3505 perm/sec)   p_kst 2.346167e-01   p_cons 3.633333e-03   p_joint 6.233333e-03

Joint ci ratio: 2.102175e-01	ci left: 4.423254e-03	ci right 5.475570e-03	k: 345	n:70000
Cons ci ratio: 2.426545e-01	ci left: 3.263761e-03	ci right 4.178137e-03	k: 259	n:70000
KS ci ratio: 2.677037e-02	ci left: 2.313368e-01	ci right 2.376281e-01	k: 16413	n:70000
IARS   70000 perm   20 sec   (3528 perm/sec)   p_kst 2.344714e-01   p_cons 3.700000e-03   p_joint 4.928571e-03

Joint ci ratio: 2.030426e-01	ci left: 4.166622e-03	ci right 5.119849e-03	k: 370	n:80000
Cons ci ratio: 2.281972e-01	ci left: 3.255741e-03	ci right 4.105878e-03	k: 293	n:80000
KS ci ratio: 2.502471e-02	ci left: 2.317790e-01	ci right 2.376652e-01	k: 18777	n:80000
IARS   80000 perm   23 sec   (3537 perm/sec)   p_kst 2.347125e-01   p_cons 3.662500e-03   p_joint 4.625000e-03

Joint ci ratio: 1.535553e-01	ci left: 6.636638e-03	ci right 7.751036e-03	k: 646	n:90000
Cons ci ratio: 2.140933e-01	ci left: 3.313849e-03	ci right 4.118660e-03	k: 333	n:90000
KS ci ratio: 2.363392e-02	ci left: 2.313367e-01	ci right 2.368805e-01	k: 21069	n:90000
IARS   90000 perm   25 sec   (3536 perm/sec)   p_kst 2.341000e-01   p_cons 3.700000e-03   p_joint 7.177778e-03

Joint ci ratio: 1.712895e-01	ci left: 4.763624e-03	ci right 5.665441e-03	k: 520	n:100000
Cons ci ratio: 2.023180e-01	ci left: 3.361631e-03	ci right 4.127597e-03	k: 373	n:100000
KS ci ratio: 2.238435e-02	ci left: 2.320660e-01	ci right 2.373294e-01	k: 23469	n:100000
IARS   100000 perm   28 sec   (3521 perm/sec)   p_kst 2.346900e-01   p_cons 3.730000e-03   p_joint 5.200000e-03

Joint ci ratio: 1.806217e-01	ci left: 3.878481e-03	ci right 4.657103e-03	k: 468	n:110000
Cons ci ratio: 1.944266e-01	ci left: 3.323846e-03	ci right 4.048165e-03	k: 404	n:110000
KS ci ratio: 2.133941e-02	ci left: 2.322432e-01	ci right 2.372617e-01	k: 25822	n:110000
IARS   110000 perm   31 sec   (3506 perm/sec)   p_kst 2.347455e-01   p_cons 3.672727e-03   p_joint 4.254545e-03

Joint ci ratio: 1.358407e-01	ci left: 6.423318e-03	ci right 7.367415e-03	k: 826	n:120000
Cons ci ratio: 1.852714e-01	ci left: 3.372301e-03	ci right 4.068688e-03	k: 445	n:120000
KS ci ratio: 2.041698e-02	ci left: 2.325950e-01	ci right 2.374011e-01	k: 28199	n:120000
IARS   120000 perm   35 sec   (3460 perm/sec)   p_kst 2.349917e-01   p_cons 3.708333e-03   p_joint 6.883333e-03

Joint ci ratio: 1.345730e-01	ci left: 6.048051e-03	ci right 6.928027e-03	k: 842	n:130000
Cons ci ratio: 1.774814e-01	ci left: 3.406626e-03	ci right 4.077348e-03	k: 485	n:130000
KS ci ratio: 1.963407e-02	ci left: 2.323599e-01	ci right 2.369750e-01	k: 30506	n:130000
IARS   130000 perm   38 sec   (3434 perm/sec)   p_kst 2.346615e-01   p_cons 3.730769e-03   p_joint 6.476923e-03

Joint ci ratio: 1.141712e-01	ci left: 7.873035e-03	ci right 8.833209e-03	k: 1168	n:140000
Cons ci ratio: 1.694699e-01	ci left: 3.484451e-03	ci right 4.136365e-03	k: 532	n:140000
KS ci ratio: 1.893858e-02	ci left: 2.320904e-01	ci right 2.365349e-01	k: 32803	n:140000
IARS   140000 perm   41 sec   (3405 perm/sec)   p_kst 2.343071e-01   p_cons 3.800000e-03   p_joint 8.342857e-03

Joint ci ratio: 1.021963e-01	ci left: 9.216671e-03	ci right 1.021575e-02	k: 1456	n:150000
Cons ci ratio: 1.612028e-01	ci left: 3.610066e-03	ci right 4.249344e-03	k: 588	n:150000
KS ci ratio: 1.829441e-02	ci left: 2.322049e-01	ci right 2.364987e-01	k: 35152	n:150000
IARS   150000 perm   44 sec   (3376 perm/sec)   p_kst 2.343467e-01   p_cons 3.920000e-03   p_joint 9.706667e-03

Joint ci ratio: 1.033796e-01	ci left: 8.445596e-03	ci right 9.372331e-03	k: 1424	n:160000
Cons ci ratio: 1.569981e-01	ci left: 3.576469e-03	ci right 4.191723e-03	k: 620	n:160000
KS ci ratio: 1.772137e-02	ci left: 2.321141e-01	ci right 2.362705e-01	k: 37470	n:160000
IARS   160000 perm   48 sec   (3344 perm/sec)   p_kst 2.341875e-01   p_cons 3.875000e-03   p_joint 8.900000e-03

Joint ci ratio: 9.266197e-02	ci left: 9.934669e-03	ci right 1.090567e-02	k: 1770	n:170000
Cons ci ratio: 1.522889e-01	ci left: 3.586625e-03	ci right 4.183431e-03	k: 659	n:170000
KS ci ratio: 1.717956e-02	ci left: 2.324406e-01	ci right 2.364743e-01	k: 39857	n:170000
IARS   170000 perm   51 sec   (3314 perm/sec)   p_kst 2.344529e-01   p_cons 3.876471e-03   p_joint 1.041176e-02

Joint ci ratio: 9.641461e-02	ci left: 8.661040e-03	ci right 9.543768e-03	k: 1637	n:180000
Cons ci ratio: 1.488369e-01	ci left: 3.553098e-03	ci right 4.129730e-03	k: 690	n:180000
KS ci ratio: 1.670965e-02	ci left: 2.321952e-01	ci right 2.361133e-01	k: 42147	n:180000
IARS   180000 perm   55 sec   (3282 perm/sec)   p_kst 2.341500e-01   p_cons 3.833333e-03   p_joint 9.094444e-03

Joint ci ratio: 9.012906e-02	ci left: 9.413374e-03	ci right 1.030694e-02	k: 1872	n:190000
Cons ci ratio: 1.451060e-01	ci left: 3.548599e-03	ci right 4.108813e-03	k: 726	n:190000
KS ci ratio: 1.625815e-02	ci left: 2.323759e-01	ci right 2.361901e-01	k: 44513	n:190000
IARS   190000 perm   58 sec   (3250 perm/sec)   p_kst 2.342789e-01   p_cons 3.821053e-03   p_joint 9.852632e-03

Joint ci ratio: 8.797274e-02	ci left: 9.397346e-03	ci right 1.026695e-02	k: 1965	n:200000
Cons ci ratio: 1.407195e-01	ci left: 3.592951e-03	ci right 4.141583e-03	k: 772	n:200000
KS ci ratio: 1.584115e-02	ci left: 2.325448e-01	ci right 2.362629e-01	k: 46880	n:200000
IARS   200000 perm   62 sec   (3217 perm/sec)   p_kst 2.344000e-01   p_cons 3.860000e-03   p_joint 9.825000e-03

Joint ci ratio: 9.302009e-02	ci left: 7.995465e-03	ci right 8.780100e-03	k: 1760	n:210000
Cons ci ratio: 1.372137e-01	ci left: 3.605714e-03	ci right 4.141457e-03	k: 812	n:210000
KS ci ratio: 1.545386e-02	ci left: 2.327177e-01	ci right 2.363468e-01	k: 49251	n:210000
IARS   210000 perm   66 sec   (3184 perm/sec)   p_kst 2.345286e-01   p_cons 3.866667e-03   p_joint 8.380952e-03

Joint ci ratio: 8.255126e-02	ci left: 9.726440e-03	ci right 1.056836e-02	k: 2231	n:220000
Cons ci ratio: 1.344330e-01	ci left: 3.591110e-03	ci right 4.113005e-03	k: 846	n:220000
KS ci ratio: 1.511660e-02	ci left: 2.323318e-01	ci right 2.358752e-01	k: 51502	n:220000
IARS   220000 perm   70 sec   (3151 perm/sec)   p_kst 2.341000e-01   p_cons 3.845455e-03   p_joint 1.014091e-02

Joint ci ratio: 8.057041e-02	ci left: 9.776326e-03	ci right 1.060131e-02	k: 2342	n:230000
Cons ci ratio: 1.317397e-01	ci left: 3.582081e-03	ci right 4.091418e-03	k: 881	n:230000
KS ci ratio: 1.478613e-02	ci left: 2.323273e-01	ci right 2.357924e-01	k: 53833	n:230000
IARS   230000 perm   74 sec   (3118 perm/sec)   p_kst 2.340565e-01   p_cons 3.830435e-03   p_joint 1.018261e-02

Joint ci ratio: 7.511327e-02	ci left: 1.079916e-02	ci right 1.164604e-02	k: 2692	n:240000
Cons ci ratio: 1.289200e-01	ci left: 3.590031e-03	ci right 4.088736e-03	k: 920	n:240000
KS ci ratio: 1.448114e-02	ci left: 2.322076e-01	ci right 2.355988e-01	k: 56136	n:240000
IARS   240000 perm   78 sec   (3086 perm/sec)   p_kst 2.339000e-01   p_cons 3.833333e-03   p_joint 1.121667e-02

Joint ci ratio: 6.900447e-02	ci left: 1.230403e-02	ci right 1.318732e-02	k: 3185	n:250000
Cons ci ratio: 1.264063e-01	ci left: 3.589703e-03	ci right 4.077911e-03	k: 957	n:250000
KS ci ratio: 1.418287e-02	ci left: 2.323854e-01	ci right 2.357088e-01	k: 58511	n:250000
IARS   250000 perm   82 sec   (3054 perm/sec)   p_kst 2.340440e-01   p_cons 3.828000e-03   p_joint 1.274000e-02

Joint ci ratio: 6.882504e-02	ci left: 1.189875e-02	ci right 1.275063e-02	k: 3203	n:260000
Cons ci ratio: 1.241594e-01	ci left: 3.582033e-03	ci right 4.059901e-03	k: 992	n:260000
KS ci ratio: 1.390528e-02	ci left: 2.324734e-01	ci right 2.357325e-01	k: 60866	n:260000
IARS   260000 perm   86 sec   (3022 perm/sec)   p_kst 2.341000e-01   p_cons 3.815385e-03   p_joint 1.231923e-02

Joint ci ratio: 6.821877e-02	ci left: 1.166915e-02	ci right 1.249693e-02	k: 3261	n:270000
Cons ci ratio: 1.219093e-01	ci left: 3.582185e-03	ci right 4.050787e-03	k: 1029	n:270000
KS ci ratio: 1.365748e-02	ci left: 2.321861e-01	ci right 2.353826e-01	k: 63121	n:270000
IARS   270000 perm   90 sec   (2991 perm/sec)   p_kst 2.337815e-01   p_cons 3.811111e-03   p_joint 1.207778e-02

Joint ci ratio: 6.888834e-02	ci left: 1.103815e-02	ci right 1.182916e-02	k: 3200	n:280000
Cons ci ratio: 1.197772e-01	ci left: 3.582398e-03	ci right 4.042252e-03	k: 1066	n:280000
KS ci ratio: 1.341966e-02	ci left: 2.319946e-01	ci right 2.351324e-01	k: 65397	n:280000
IARS   280000 perm   95 sec   (2960 perm/sec)   p_kst 2.335607e-01   p_cons 3.807143e-03   p_joint 1.142857e-02

Joint ci ratio: 7.006212e-02	ci left: 1.030499e-02	ci right 1.105656e-02	k: 3096	n:290000
Cons ci ratio: 1.176462e-01	ci left: 3.589357e-03	ci right 4.041337e-03	k: 1105	n:290000
KS ci ratio: 1.318265e-02	ci left: 2.321195e-01	ci right 2.352031e-01	k: 67761	n:290000
IARS   290000 perm   99 sec   (2931 perm/sec)   p_kst 2.336586e-01   p_cons 3.810345e-03   p_joint 1.067586e-02

Joint ci ratio: 6.963306e-02	ci left: 1.008918e-02	ci right 1.082032e-02	k: 3135	n:300000
Cons ci ratio: 1.161353e-01	ci left: 3.563549e-03	ci right 4.006121e-03	k: 1134	n:300000
KS ci ratio: 1.296550e-02	ci left: 2.320236e-01	ci right 2.350549e-01	k: 70061	n:300000
IARS   300000 perm   103 sec   (2902 perm/sec)   p_kst 2.335367e-01   p_cons 3.780000e-03   p_joint 1.045000e-02

Joint ci ratio: 7.093586e-02	ci left: 9.408667e-03	ci right 1.010377e-02	k: 3023	n:310000
Cons ci ratio: 1.138496e-01	ci left: 3.592718e-03	ci right 4.029541e-03	k: 1180	n:310000
KS ci ratio: 1.274920e-02	ci left: 2.322015e-01	ci right 2.351841e-01	k: 72444	n:310000
IARS   310000 perm   108 sec   (2873 perm/sec)   p_kst 2.336903e-01   p_cons 3.806452e-03   p_joint 9.751613e-03

Joint ci ratio: 7.480074e-02	ci left: 8.190954e-03	ci right 8.830495e-03	k: 2722	n:320000
Cons ci ratio: 1.123854e-01	ci left: 3.574578e-03	ci right 4.003235e-03	k: 1211	n:320000
KS ci ratio: 1.255421e-02	ci left: 2.320600e-01	ci right 2.349948e-01	k: 74728	n:320000
IARS   320000 perm   112 sec   (2845 perm/sec)   p_kst 2.335250e-01   p_cons 3.784375e-03   p_joint 8.506250e-03

Joint ci ratio: 6.807362e-02	ci left: 9.609690e-03	ci right 1.028987e-02	k: 3282	n:330000
Cons ci ratio: 1.103542e-01	ci left: 3.598825e-03	ci right 4.022083e-03	k: 1256	n:330000
KS ci ratio: 1.237209e-02	ci left: 2.318064e-01	ci right 2.346952e-01	k: 76972	n:330000
IARS   330000 perm   117 sec   (2818 perm/sec)   p_kst 2.332485e-01   p_cons 3.806061e-03   p_joint 9.945455e-03

Joint ci ratio: 6.663349e-02	ci left: 9.740578e-03	ci right 1.041487e-02	k: 3425	n:340000
Cons ci ratio: 1.085550e-01	ci left: 3.613126e-03	ci right 4.030695e-03	k: 1298	n:340000
KS ci ratio: 1.218223e-02	ci left: 2.320201e-01	ci right 2.348668e-01	k: 79370	n:340000
IARS   340000 perm   122 sec   (2788 perm/sec)   p_kst 2.334412e-01   p_cons 3.817647e-03   p_joint 1.007353e-02

Joint ci ratio: 6.681079e-02	ci left: 9.414462e-03	ci right 1.006798e-02	k: 3408	n:350000
Cons ci ratio: 1.072430e-01	ci left: 3.598854e-03	ci right 4.009429e-03	k: 1330	n:350000
KS ci ratio: 1.200871e-02	ci left: 2.319880e-01	ci right 2.347935e-01	k: 81686	n:350000
IARS   350000 perm   127 sec   (2762 perm/sec)   p_kst 2.333886e-01   p_cons 3.800000e-03   p_joint 9.737143e-03

Joint ci ratio: 6.480603e-02	ci left: 9.734932e-03	ci right 1.038966e-02	k: 3621	n:360000
Cons ci ratio: 1.055509e-01	ci left: 3.615153e-03	ci right 4.020676e-03	k: 1373	n:360000
KS ci ratio: 1.183844e-02	ci left: 2.320772e-01	ci right 2.348437e-01	k: 84045	n:360000
IARS   360000 perm   132 sec   (2736 perm/sec)   p_kst 2.334583e-01   p_cons 3.813889e-03   p_joint 1.005833e-02

Joint ci ratio: 6.413880e-02	ci left: 9.673910e-03	ci right 1.031758e-02	k: 3697	n:370000
Cons ci ratio: 1.041579e-01	ci left: 3.614824e-03	ci right 4.014631e-03	k: 1410	n:370000
KS ci ratio: 1.167654e-02	ci left: 2.321214e-01	ci right 2.348503e-01	k: 86389	n:370000
IARS   370000 perm   137 sec   (2709 perm/sec)   p_kst 2.334838e-01   p_cons 3.810811e-03   p_joint 9.991892e-03

Joint ci ratio: 5.511587e-02	ci left: 1.277463e-02	ci right 1.350124e-02	k: 4991	n:380000
Cons ci ratio: 1.027120e-01	ci left: 3.622237e-03	ci right 4.016967e-03	k: 1450	n:380000
KS ci ratio: 1.151602e-02	ci left: 2.323211e-01	ci right 2.350146e-01	k: 88793	n:380000
IARS   380000 perm   142 sec   (2684 perm/sec)   p_kst 2.336658e-01   p_cons 3.815789e-03   p_joint 1.313421e-02

Joint ci ratio: 5.439052e-02	ci left: 1.278596e-02	ci right 1.350335e-02	k: 5125	n:390000
Cons ci ratio: 1.013246e-01	ci left: 3.629307e-03	ci right 4.019147e-03	k: 1490	n:390000
KS ci ratio: 1.137089e-02	ci left: 2.322293e-01	ci right 2.348875e-01	k: 91087	n:390000
IARS   390000 perm   147 sec   (2659 perm/sec)   p_kst 2.335564e-01   p_cons 3.820513e-03   p_joint 1.314103e-02

Joint ci ratio: 5.213806e-02	ci left: 1.357154e-02	ci right 1.430053e-02	k: 5573	n:400000
Cons ci ratio: 1.004541e-01	ci left: 3.601932e-03	ci right 3.985311e-03	k: 1516	n:400000
KS ci ratio: 1.122704e-02	ci left: 2.322720e-01	ci right 2.348969e-01	k: 93433	n:400000
IARS   400000 perm   152 sec   (2634 perm/sec)   p_kst 2.335825e-01   p_cons 3.790000e-03   p_joint 1.393250e-02

Joint ci ratio: 5.144058e-02	ci left: 1.360646e-02	ci right 1.432726e-02	k: 5725	n:410000
Cons ci ratio: 9.874216e-02	ci left: 3.640132e-03	ci right 4.020592e-03	k: 1569	n:410000
KS ci ratio: 1.108338e-02	ci left: 2.324784e-01	ci right 2.350718e-01	k: 95847	n:410000
IARS   410000 perm   157 sec   (2610 perm/sec)   p_kst 2.337732e-01   p_cons 3.826829e-03   p_joint 1.396341e-02

Outputting figure to mutsig2_images.part000000000082/IARS.3_3921_410000_0.23377_0.0038268_0.013963.png
                gene_name: IARS
               theta_stop: 0.099 
                    nperm: 410000 
                     p_ks: 0.23 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.24 
                   p_cons: 0.0038 
      ci_cons_bounds_left: 0.0036 
     ci_cons_bounds_right: 0.0040 
                  p_joint: 0.014 
     ci_joint_bounds_left: 0.014 
    ci_joint_bounds_right: 0.014 

Current progress: 33 percent done.
HTR3C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.054278e-02	ci left: 3.659962e-01	ci right 3.850763e-01	k: 3755	n:10000
Cons ci ratio: 9.124547e-02	ci left: 1.486448e-01	ci right 1.629564e-01	k: 1557	n:10000
KS ci ratio: 7.779080e-02	ci left: 1.945626e-01	ci right 2.104111e-01	k: 2024	n:10000
HTR3C   10000 perm   2 sec   (6476 perm/sec)   p_kst 2.024000e-01   p_cons 1.557000e-01   p_joint 3.755000e-01

Outputting figure to mutsig2_images.part000000000082/HTR3C.2_1380_10000_0.2024_0.1557_0.3755.png
                gene_name: HTR3C
               theta_stop: 0.091 
                    nperm: 10000 
                     p_ks: 0.20 
        ci_ks_bounds_left: 0.19 
       ci_ks_bounds_right: 0.21 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.38 
     ci_joint_bounds_left: 0.37 
    ci_joint_bounds_right: 0.39 

Current progress: 67 percent done.
HTRA3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.484002e-01	ci left: 1.032396e-02	ci right 1.476677e-02	k: 124	n:10000
Cons ci ratio: 8.856681e-02	ci left: 1.564968e-01	ci right 1.710996e-01	k: 1637	n:10000
KS ci ratio: 6.614075e-01	ci left: 2.355713e-03	ci right 4.747948e-03	k: 34	n:10000
HTRA3   10000 perm   1 sec   (6710 perm/sec)   p_kst 3.400000e-03   p_cons 1.637000e-01   p_joint 1.240000e-02

Joint ci ratio: 2.581180e-01	ci left: 9.928283e-03	ci right 1.291630e-02	k: 227	n:20000
Cons ci ratio: 6.168387e-02	ci left: 1.627927e-01	ci right 1.732040e-01	k: 3359	n:20000
KS ci ratio: 5.011261e-01	ci left: 2.290073e-03	ci right 3.859930e-03	k: 60	n:20000
HTRA3   20000 perm   3 sec   (5931 perm/sec)   p_kst 3.000000e-03   p_cons 1.679500e-01   p_joint 1.135000e-02

Joint ci ratio: 4.058478e-01	ci left: 2.472860e-03	ci right 3.759688e-03	k: 92	n:30000
Cons ci ratio: 4.988976e-02	ci left: 1.663918e-01	ci right 1.749387e-01	k: 5119	n:30000
KS ci ratio: 4.271008e-01	ci left: 2.204219e-03	ci right 3.428562e-03	k: 83	n:30000
HTRA3   30000 perm   5 sec   (5613 perm/sec)   p_kst 2.766667e-03   p_cons 1.706333e-01   p_joint 3.066667e-03

Joint ci ratio: 3.216214e-01	ci left: 3.105786e-03	ci right 4.318021e-03	k: 147	n:40000
Cons ci ratio: 4.302616e-02	ci left: 1.681396e-01	ci right 1.755581e-01	k: 6873	n:40000
KS ci ratio: 3.698817e-01	ci left: 2.283367e-03	ci right 3.340868e-03	k: 111	n:40000
HTRA3   40000 perm   7 sec   (5426 perm/sec)   p_kst 2.775000e-03   p_cons 1.718250e-01   p_joint 3.675000e-03

Joint ci ratio: 3.369208e-01	ci left: 2.245931e-03	ci right 3.173307e-03	k: 134	n:50000
Cons ci ratio: 4.289163e-02	ci left: 1.400612e-01	ci right 1.462203e-01	k: 7156	n:50000
KS ci ratio: 3.369208e-01	ci left: 2.245931e-03	ci right 3.173307e-03	k: 134	n:50000
HTRA3   50000 perm   9 sec   (5284 perm/sec)   p_kst 2.680000e-03   p_cons 1.431200e-01   p_joint 2.680000e-03

Joint ci ratio: 3.207373e-01	ci left: 2.085661e-03	ci right 2.896993e-03	k: 148	n:60000
Cons ci ratio: 3.920359e-02	ci left: 1.400260e-01	ci right 1.456419e-01	k: 8569	n:60000
KS ci ratio: 3.207373e-01	ci left: 2.085661e-03	ci right 2.896993e-03	k: 148	n:60000
HTRA3   60000 perm   12 sec   (5155 perm/sec)   p_kst 2.466667e-03   p_cons 1.428167e-01   p_joint 2.466667e-03

Joint ci ratio: 2.909923e-01	ci left: 2.209869e-03	ci right 2.975150e-03	k: 180	n:70000
Cons ci ratio: 3.625603e-02	ci left: 1.404994e-01	ci right 1.457016e-01	k: 10016	n:70000
KS ci ratio: 2.909923e-01	ci left: 2.209869e-03	ci right 2.975150e-03	k: 180	n:70000
HTRA3   70000 perm   14 sec   (5037 perm/sec)   p_kst 2.571429e-03   p_cons 1.430857e-01   p_joint 2.571429e-03

Joint ci ratio: 2.754601e-01	ci left: 2.177497e-03	ci right 2.884351e-03	k: 201	n:80000
Cons ci ratio: 3.395424e-02	ci left: 1.403823e-01	ci right 1.452436e-01	k: 11424	n:80000
KS ci ratio: 2.754601e-01	ci left: 2.177497e-03	ci right 2.884351e-03	k: 201	n:80000
HTRA3   80000 perm   16 sec   (4933 perm/sec)   p_kst 2.512500e-03   p_cons 1.428000e-01   p_joint 2.512500e-03

Joint ci ratio: 2.627670e-01	ci left: 2.142784e-03	ci right 2.801050e-03	k: 221	n:90000
Cons ci ratio: 3.207664e-02	ci left: 1.400346e-01	ci right 1.446107e-01	k: 12808	n:90000
KS ci ratio: 2.627670e-01	ci left: 2.142784e-03	ci right 2.801050e-03	k: 221	n:90000
HTRA3   90000 perm   19 sec   (4834 perm/sec)   p_kst 2.455556e-03   p_cons 1.423111e-01   p_joint 2.455556e-03

Joint ci ratio: 2.537920e-01	ci left: 2.078141e-03	ci right 2.691293e-03	k: 237	n:100000
Cons ci ratio: 3.045707e-02	ci left: 1.399414e-01	ci right 1.442794e-01	k: 14210	n:100000
KS ci ratio: 2.537920e-01	ci left: 2.078141e-03	ci right 2.691293e-03	k: 237	n:100000
HTRA3   100000 perm   21 sec   (4740 perm/sec)   p_kst 2.370000e-03   p_cons 1.421000e-01   p_joint 2.370000e-03

Joint ci ratio: 2.414273e-01	ci left: 2.102400e-03	ci right 2.687966e-03	k: 262	n:110000
Cons ci ratio: 2.906581e-02	ci left: 1.398247e-01	ci right 1.439578e-01	k: 15607	n:110000
KS ci ratio: 2.414273e-01	ci left: 2.102400e-03	ci right 2.687966e-03	k: 262	n:110000
HTRA3   110000 perm   24 sec   (4651 perm/sec)   p_kst 2.381818e-03   p_cons 1.418818e-01   p_joint 2.381818e-03

Joint ci ratio: 2.283379e-01	ci left: 2.170351e-03	ci right 2.737455e-03	k: 293	n:120000
Cons ci ratio: 2.780358e-02	ci left: 1.401290e-01	ci right 1.440883e-01	k: 17052	n:120000
KS ci ratio: 2.283379e-01	ci left: 2.170351e-03	ci right 2.737455e-03	k: 293	n:120000
HTRA3   120000 perm   26 sec   (4570 perm/sec)   p_kst 2.441667e-03   p_cons 1.421000e-01   p_joint 2.441667e-03

Joint ci ratio: 2.178427e-01	ci left: 2.214023e-03	ci right 2.762391e-03	k: 322	n:130000
Cons ci ratio: 2.673229e-02	ci left: 1.400302e-01	ci right 1.438319e-01	k: 18450	n:130000
KS ci ratio: 2.178427e-01	ci left: 2.214023e-03	ci right 2.762391e-03	k: 322	n:130000
HTRA3   130000 perm   29 sec   (4486 perm/sec)   p_kst 2.476923e-03   p_cons 1.419231e-01   p_joint 2.476923e-03

Joint ci ratio: 2.086731e-01	ci left: 2.251967e-03	ci right 2.783258e-03	k: 351	n:140000
Cons ci ratio: 2.580023e-02	ci left: 1.397208e-01	ci right 1.433798e-01	k: 19816	n:140000
KS ci ratio: 2.086731e-01	ci left: 2.251967e-03	ci right 2.783258e-03	k: 351	n:140000
HTRA3   140000 perm   32 sec   (4400 perm/sec)   p_kst 2.507143e-03   p_cons 1.415429e-01   p_joint 2.507143e-03

Joint ci ratio: 2.021741e-01	ci left: 2.247283e-03	ci right 2.758917e-03	k: 374	n:150000
Cons ci ratio: 2.491617e-02	ci left: 1.398724e-01	ci right 1.434081e-01	k: 21245	n:150000
KS ci ratio: 2.021741e-01	ci left: 2.247283e-03	ci right 2.758917e-03	k: 374	n:150000
HTRA3   150000 perm   35 sec   (4320 perm/sec)   p_kst 2.493333e-03   p_cons 1.416333e-01   p_joint 2.493333e-03

Joint ci ratio: 1.972428e-01	ci left: 2.219637e-03	ci right 2.711169e-03	k: 393	n:160000
Cons ci ratio: 2.408933e-02	ci left: 1.402868e-01	ci right 1.437136e-01	k: 22719	n:160000
KS ci ratio: 1.972428e-01	ci left: 2.219637e-03	ci right 2.711169e-03	k: 393	n:160000
HTRA3   160000 perm   38 sec   (4248 perm/sec)   p_kst 2.456250e-03   p_cons 1.419938e-01   p_joint 2.456250e-03

Joint ci ratio: 1.901339e-01	ci left: 2.256989e-03	ci right 2.736699e-03	k: 423	n:170000
Cons ci ratio: 2.335880e-02	ci left: 1.404551e-01	ci right 1.437806e-01	k: 24159	n:170000
KS ci ratio: 1.901339e-01	ci left: 2.256989e-03	ci right 2.736699e-03	k: 423	n:170000
HTRA3   170000 perm   41 sec   (4174 perm/sec)   p_kst 2.488235e-03   p_cons 1.421118e-01   p_joint 2.488235e-03

Joint ci ratio: 1.866496e-01	ci left: 2.216293e-03	ci right 2.677743e-03	k: 439	n:180000
Cons ci ratio: 2.267907e-02	ci left: 1.407333e-01	ci right 1.439671e-01	k: 25622	n:180000
KS ci ratio: 1.866496e-01	ci left: 2.216293e-03	ci right 2.677743e-03	k: 439	n:180000
HTRA3   180000 perm   44 sec   (4111 perm/sec)   p_kst 2.438889e-03   p_cons 1.423444e-01   p_joint 2.438889e-03

Joint ci ratio: 1.805919e-01	ci left: 2.250288e-03	ci right 2.701947e-03	k: 469	n:190000
Cons ci ratio: 2.206397e-02	ci left: 1.408891e-01	ci right 1.440376e-01	k: 27067	n:190000
KS ci ratio: 1.805919e-01	ci left: 2.250288e-03	ci right 2.701947e-03	k: 469	n:190000
HTRA3   190000 perm   47 sec   (4048 perm/sec)   p_kst 2.468421e-03   p_cons 1.424579e-01   p_joint 2.468421e-03

Joint ci ratio: 1.768700e-01	ci left: 2.233298e-03	ci right 2.671322e-03	k: 489	n:200000
Cons ci ratio: 2.150294e-02	ci left: 1.409558e-01	ci right 1.440246e-01	k: 28497	n:200000
KS ci ratio: 1.768700e-01	ci left: 2.233298e-03	ci right 2.671322e-03	k: 489	n:200000
HTRA3   200000 perm   50 sec   (3986 perm/sec)   p_kst 2.445000e-03   p_cons 1.424850e-01   p_joint 2.445000e-03

Joint ci ratio: 1.718557e-01	ci left: 2.259023e-03	ci right 2.688228e-03	k: 518	n:210000
Cons ci ratio: 2.098877e-02	ci left: 1.409459e-01	ci right 1.439402e-01	k: 29912	n:210000
KS ci ratio: 1.718557e-01	ci left: 2.259023e-03	ci right 2.688228e-03	k: 518	n:210000
HTRA3   210000 perm   53 sec   (3926 perm/sec)   p_kst 2.466667e-03   p_cons 1.424381e-01   p_joint 2.466667e-03

Joint ci ratio: 1.678603e-01	ci left: 2.265146e-03	ci right 2.684498e-03	k: 543	n:220000
Cons ci ratio: 2.050332e-02	ci left: 1.410146e-01	ci right 1.439403e-01	k: 31344	n:220000
KS ci ratio: 1.678603e-01	ci left: 2.265146e-03	ci right 2.684498e-03	k: 543	n:220000
HTRA3   220000 perm   57 sec   (3867 perm/sec)   p_kst 2.468182e-03   p_cons 1.424727e-01   p_joint 2.468182e-03

Joint ci ratio: 1.647126e-01	ci left: 2.254165e-03	ci right 2.662882e-03	k: 564	n:230000
Cons ci ratio: 2.004614e-02	ci left: 1.411257e-01	ci right 1.439877e-01	k: 32787	n:230000
KS ci ratio: 1.647126e-01	ci left: 2.254165e-03	ci right 2.662882e-03	k: 564	n:230000
HTRA3   230000 perm   60 sec   (3810 perm/sec)   p_kst 2.452174e-03   p_cons 1.425522e-01   p_joint 2.452174e-03

Joint ci ratio: 1.611850e-01	ci left: 2.260161e-03	ci right 2.660339e-03	k: 589	n:240000
Cons ci ratio: 1.965240e-02	ci left: 1.408050e-01	ci right 1.436037e-01	k: 34128	n:240000
KS ci ratio: 1.611850e-01	ci left: 2.260161e-03	ci right 2.660339e-03	k: 589	n:240000
HTRA3   240000 perm   64 sec   (3755 perm/sec)   p_kst 2.454167e-03   p_cons 1.422000e-01   p_joint 2.454167e-03

Joint ci ratio: 1.577463e-01	ci left: 2.269606e-03	ci right 2.662071e-03	k: 615	n:250000
Cons ci ratio: 1.924463e-02	ci left: 1.409686e-01	ci right 1.437117e-01	k: 35584	n:250000
KS ci ratio: 1.577463e-01	ci left: 2.269606e-03	ci right 2.662071e-03	k: 615	n:250000
HTRA3   250000 perm   68 sec   (3701 perm/sec)   p_kst 2.460000e-03   p_cons 1.423360e-01   p_joint 2.460000e-03

Joint ci ratio: 1.546394e-01	ci left: 2.274709e-03	ci right 2.659592e-03	k: 640	n:260000
Cons ci ratio: 1.883278e-02	ci left: 1.414879e-01	ci right 1.441816e-01	k: 37136	n:260000
KS ci ratio: 1.546394e-01	ci left: 2.274709e-03	ci right 2.659592e-03	k: 640	n:260000
HTRA3   260000 perm   71 sec   (3649 perm/sec)   p_kst 2.461538e-03   p_cons 1.428308e-01   p_joint 2.461538e-03

Joint ci ratio: 1.513678e-01	ci left: 2.290196e-03	ci right 2.668758e-03	k: 668	n:270000
Cons ci ratio: 1.848139e-02	ci left: 1.415044e-01	ci right 1.441477e-01	k: 38562	n:270000
KS ci ratio: 1.513678e-01	ci left: 2.290196e-03	ci right 2.668758e-03	k: 668	n:270000
HTRA3   270000 perm   75 sec   (3601 perm/sec)   p_kst 2.474074e-03   p_cons 1.428222e-01   p_joint 2.474074e-03

Joint ci ratio: 1.489394e-01	ci left: 2.284022e-03	ci right 2.654967e-03	k: 690	n:280000
Cons ci ratio: 1.812729e-02	ci left: 1.418120e-01	ci right 1.444097e-01	k: 40070	n:280000
KS ci ratio: 1.489394e-01	ci left: 2.284022e-03	ci right 2.654967e-03	k: 690	n:280000
HTRA3   280000 perm   79 sec   (3553 perm/sec)   p_kst 2.464286e-03   p_cons 1.431071e-01   p_joint 2.464286e-03

Joint ci ratio: 1.470384e-01	ci left: 2.265032e-03	ci right 2.627784e-03	k: 708	n:290000
Cons ci ratio: 1.780803e-02	ci left: 1.418892e-01	ci right 1.444421e-01	k: 41517	n:290000
KS ci ratio: 1.470384e-01	ci left: 2.265032e-03	ci right 2.627784e-03	k: 708	n:290000
HTRA3   290000 perm   83 sec   (3506 perm/sec)   p_kst 2.441379e-03   p_cons 1.431621e-01   p_joint 2.441379e-03

Joint ci ratio: 1.448094e-01	ci left: 2.260186e-03	ci right 2.616201e-03	k: 730	n:300000
Cons ci ratio: 1.749770e-02	ci left: 1.420646e-01	ci right 1.445756e-01	k: 42995	n:300000
KS ci ratio: 1.448094e-01	ci left: 2.260186e-03	ci right 2.616201e-03	k: 730	n:300000
HTRA3   300000 perm   87 sec   (3462 perm/sec)   p_kst 2.433333e-03   p_cons 1.433167e-01   p_joint 2.433333e-03

Joint ci ratio: 1.429647e-01	ci left: 2.246359e-03	ci right 2.595304e-03	k: 749	n:310000
Cons ci ratio: 1.720417e-02	ci left: 1.422130e-01	ci right 1.446840e-01	k: 44468	n:310000
KS ci ratio: 1.429647e-01	ci left: 2.246359e-03	ci right 2.595304e-03	k: 749	n:310000
HTRA3   310000 perm   91 sec   (3418 perm/sec)   p_kst 2.416129e-03   p_cons 1.434452e-01   p_joint 2.416129e-03

Joint ci ratio: 1.411886e-01	ci left: 2.233424e-03	ci right 2.575687e-03	k: 768	n:320000
Cons ci ratio: 1.693979e-02	ci left: 1.421375e-01	ci right 1.445689e-01	k: 45872	n:320000
KS ci ratio: 1.411886e-01	ci left: 2.233424e-03	ci right 2.575687e-03	k: 768	n:320000
HTRA3   320000 perm   95 sec   (3376 perm/sec)   p_kst 2.400000e-03   p_cons 1.433500e-01   p_joint 2.400000e-03

Joint ci ratio: 1.396549e-01	ci left: 2.215448e-03	ci right 2.550961e-03	k: 785	n:330000
Cons ci ratio: 1.668105e-02	ci left: 1.421575e-01	ci right 1.445518e-01	k: 47306	n:330000
KS ci ratio: 1.396549e-01	ci left: 2.215448e-03	ci right 2.550961e-03	k: 785	n:330000
HTRA3   330000 perm   99 sec   (3334 perm/sec)   p_kst 2.378788e-03   p_cons 1.433515e-01   p_joint 2.378788e-03

Joint ci ratio: 1.368944e-01	ci left: 2.241152e-03	ci right 2.573302e-03	k: 817	n:340000
Cons ci ratio: 1.643225e-02	ci left: 1.422001e-01	ci right 1.445590e-01	k: 48748	n:340000
KS ci ratio: 1.368944e-01	ci left: 2.241152e-03	ci right 2.573302e-03	k: 817	n:340000
HTRA3   340000 perm   103 sec   (3295 perm/sec)   p_kst 2.402941e-03   p_cons 1.433765e-01   p_joint 2.402941e-03

Joint ci ratio: 1.350097e-01	ci left: 2.240598e-03	ci right 2.567727e-03	k: 840	n:350000
Cons ci ratio: 1.620010e-02	ci left: 1.421521e-01	ci right 1.444766e-01	k: 50159	n:350000
KS ci ratio: 1.350097e-01	ci left: 2.240598e-03	ci right 2.567727e-03	k: 840	n:350000
HTRA3   350000 perm   108 sec   (3255 perm/sec)   p_kst 2.400000e-03   p_cons 1.433114e-01   p_joint 2.400000e-03

Joint ci ratio: 1.332781e-01	ci left: 2.237419e-03	ci right 2.559563e-03	k: 862	n:360000
Cons ci ratio: 1.598276e-02	ci left: 1.420268e-01	ci right 1.443178e-01	k: 51541	n:360000
KS ci ratio: 1.332781e-01	ci left: 2.237419e-03	ci right 2.559563e-03	k: 862	n:360000
HTRA3   360000 perm   112 sec   (3217 perm/sec)   p_kst 2.394444e-03   p_cons 1.431694e-01   p_joint 2.394444e-03

Joint ci ratio: 1.315370e-01	ci left: 2.237052e-03	ci right 2.554606e-03	k: 885	n:370000
Cons ci ratio: 1.576108e-02	ci left: 1.421078e-01	ci right 1.443680e-01	k: 52997	n:370000
KS ci ratio: 1.315370e-01	ci left: 2.237052e-03	ci right 2.554606e-03	k: 885	n:370000
HTRA3   370000 perm   116 sec   (3176 perm/sec)   p_kst 2.391892e-03   p_cons 1.432351e-01   p_joint 2.391892e-03

Joint ci ratio: 1.293641e-01	ci left: 2.254554e-03	ci right 2.568900e-03	k: 915	n:380000
Cons ci ratio: 1.555872e-02	ci left: 1.420221e-01	ci right 1.442517e-01	k: 54391	n:380000
KS ci ratio: 1.293641e-01	ci left: 2.254554e-03	ci right 2.568900e-03	k: 915	n:380000
HTRA3   380000 perm   121 sec   (3139 perm/sec)   p_kst 2.407895e-03   p_cons 1.431342e-01   p_joint 2.407895e-03

Joint ci ratio: 1.279067e-01	ci left: 2.248858e-03	ci right 2.558609e-03	k: 936	n:390000
Cons ci ratio: 1.536380e-02	ci left: 1.419436e-01	ci right 1.441438e-01	k: 55786	n:390000
KS ci ratio: 1.279067e-01	ci left: 2.248858e-03	ci right 2.558609e-03	k: 936	n:390000
HTRA3   390000 perm   126 sec   (3102 perm/sec)   p_kst 2.400000e-03   p_cons 1.430410e-01   p_joint 2.400000e-03

Joint ci ratio: 1.261023e-01	ci left: 2.257993e-03	ci right 2.564287e-03	k: 963	n:400000
Cons ci ratio: 1.517509e-02	ci left: 1.418841e-01	ci right 1.440561e-01	k: 57187	n:400000
KS ci ratio: 1.261023e-01	ci left: 2.257993e-03	ci right 2.564287e-03	k: 963	n:400000
HTRA3   400000 perm   130 sec   (3066 perm/sec)   p_kst 2.407500e-03   p_cons 1.429675e-01   p_joint 2.407500e-03

Joint ci ratio: 1.241839e-01	ci left: 2.273801e-03	ci right 2.577202e-03	k: 993	n:410000
Cons ci ratio: 1.498511e-02	ci left: 1.419589e-01	ci right 1.441047e-01	k: 58642	n:410000
KS ci ratio: 1.241839e-01	ci left: 2.273801e-03	ci right 2.577202e-03	k: 993	n:410000
HTRA3   410000 perm   135 sec   (3031 perm/sec)   p_kst 2.421951e-03   p_cons 1.430293e-01   p_joint 2.421951e-03

Joint ci ratio: 1.228930e-01	ci left: 2.268117e-03	ci right 2.567385e-03	k: 1014	n:420000
Cons ci ratio: 1.479908e-02	ci left: 1.420802e-01	ci right 1.442009e-01	k: 60118	n:420000
KS ci ratio: 1.228930e-01	ci left: 2.268117e-03	ci right 2.567385e-03	k: 1014	n:420000
HTRA3   420000 perm   140 sec   (2996 perm/sec)   p_kst 2.414286e-03   p_cons 1.431381e-01   p_joint 2.414286e-03

Joint ci ratio: 1.212317e-01	ci left: 2.278499e-03	ci right 2.574781e-03	k: 1042	n:430000
Cons ci ratio: 1.462590e-02	ci left: 1.420940e-01	ci right 1.441899e-01	k: 61550	n:430000
KS ci ratio: 1.212317e-01	ci left: 2.278499e-03	ci right 2.574781e-03	k: 1042	n:430000
HTRA3   430000 perm   145 sec   (2962 perm/sec)   p_kst 2.423256e-03   p_cons 1.431395e-01   p_joint 2.423256e-03

Joint ci ratio: 1.199169e-01	ci left: 2.277411e-03	ci right 2.570112e-03	k: 1065	n:440000
Cons ci ratio: 1.446000e-02	ci left: 1.420847e-01	ci right 1.441564e-01	k: 62972	n:440000
KS ci ratio: 1.199169e-01	ci left: 2.277411e-03	ci right 2.570112e-03	k: 1065	n:440000
HTRA3   440000 perm   150 sec   (2929 perm/sec)   p_kst 2.420455e-03   p_cons 1.431182e-01   p_joint 2.420455e-03

Joint ci ratio: 1.187533e-01	ci left: 2.272075e-03	ci right 2.561058e-03	k: 1086	n:450000
Cons ci ratio: 1.430741e-02	ci left: 1.419429e-01	ci right 1.439906e-01	k: 64334	n:450000
KS ci ratio: 1.187533e-01	ci left: 2.272075e-03	ci right 2.561058e-03	k: 1086	n:450000
HTRA3   450000 perm   155 sec   (2896 perm/sec)   p_kst 2.413333e-03   p_cons 1.429644e-01   p_joint 2.413333e-03

Joint ci ratio: 1.173578e-01	ci left: 2.277535e-03	ci right 2.563572e-03	k: 1112	n:460000
Cons ci ratio: 1.414911e-02	ci left: 1.419874e-01	ci right 1.440128e-01	k: 65779	n:460000
KS ci ratio: 1.173578e-01	ci left: 2.277535e-03	ci right 2.563572e-03	k: 1112	n:460000
HTRA3   460000 perm   161 sec   (2865 perm/sec)   p_kst 2.417391e-03   p_cons 1.429978e-01   p_joint 2.417391e-03

Joint ci ratio: 1.161126e-01	ci left: 2.278650e-03	ci right 2.561582e-03	k: 1136	n:470000
Cons ci ratio: 1.399207e-02	ci left: 1.420979e-01	ci right 1.441022e-01	k: 67256	n:470000
KS ci ratio: 1.161126e-01	ci left: 2.278650e-03	ci right 2.561582e-03	k: 1136	n:470000
HTRA3   470000 perm   166 sec   (2834 perm/sec)   p_kst 2.417021e-03   p_cons 1.430979e-01   p_joint 2.417021e-03

Joint ci ratio: 1.148567e-01	ci left: 2.281757e-03	ci right 2.561803e-03	k: 1161	n:480000
Cons ci ratio: 1.384285e-02	ci left: 1.421562e-01	ci right 1.441398e-01	k: 68710	n:480000
KS ci ratio: 1.148567e-01	ci left: 2.281757e-03	ci right 2.561803e-03	k: 1161	n:480000
HTRA3   480000 perm   171 sec   (2804 perm/sec)   p_kst 2.418750e-03   p_cons 1.431458e-01   p_joint 2.418750e-03

Joint ci ratio: 1.138330e-01	ci left: 2.276822e-03	ci right 2.553604e-03	k: 1182	n:490000
Cons ci ratio: 1.370617e-02	ci left: 1.420718e-01	ci right 1.440345e-01	k: 70095	n:490000
KS ci ratio: 1.138330e-01	ci left: 2.276822e-03	ci right 2.553604e-03	k: 1182	n:490000
HTRA3   490000 perm   177 sec   (2774 perm/sec)   p_kst 2.412245e-03   p_cons 1.430510e-01   p_joint 2.412245e-03

Joint ci ratio: 1.130719e-01	ci left: 2.262376e-03	ci right 2.535441e-03	k: 1198	n:500000
Cons ci ratio: 1.357313e-02	ci left: 1.419968e-01	ci right 1.439393e-01	k: 71483	n:500000
KS ci ratio: 1.130719e-01	ci left: 2.262376e-03	ci right 2.535441e-03	k: 1198	n:500000
HTRA3   500000 perm   182 sec   (2745 perm/sec)   p_kst 2.396000e-03   p_cons 1.429660e-01   p_joint 2.396000e-03

Joint ci ratio: 1.120029e-01	ci left: 2.261844e-03	ci right 2.532093e-03	k: 1221	n:510000
Cons ci ratio: 1.344087e-02	ci left: 1.419797e-01	ci right 1.439028e-01	k: 72899	n:510000
KS ci ratio: 1.120029e-01	ci left: 2.261844e-03	ci right 2.532093e-03	k: 1221	n:510000
HTRA3   510000 perm   188 sec   (2714 perm/sec)   p_kst 2.394118e-03   p_cons 1.429392e-01   p_joint 2.394118e-03

Joint ci ratio: 1.108298e-01	ci left: 2.266954e-03	ci right 2.534792e-03	k: 1247	n:520000
Cons ci ratio: 1.331324e-02	ci left: 1.419479e-01	ci right 1.438522e-01	k: 74307	n:520000
KS ci ratio: 1.108298e-01	ci left: 2.266954e-03	ci right 2.534792e-03	k: 1247	n:520000
HTRA3   520000 perm   194 sec   (2685 perm/sec)   p_kst 2.398077e-03   p_cons 1.428981e-01   p_joint 2.398077e-03

Joint ci ratio: 1.101270e-01	ci left: 2.253535e-03	ci right 2.517989e-03	k: 1263	n:530000
Cons ci ratio: 1.318644e-02	ci left: 1.419682e-01	ci right 1.438546e-01	k: 75742	n:530000
KS ci ratio: 1.101270e-01	ci left: 2.253535e-03	ci right 2.517989e-03	k: 1263	n:530000
HTRA3   530000 perm   199 sec   (2659 perm/sec)   p_kst 2.383019e-03   p_cons 1.429094e-01   p_joint 2.383019e-03

Joint ci ratio: 1.088423e-01	ci left: 2.265838e-03	ci right 2.528435e-03	k: 1293	n:540000
Cons ci ratio: 1.306378e-02	ci left: 1.419768e-01	ci right 1.438456e-01	k: 77171	n:540000
KS ci ratio: 1.088423e-01	ci left: 2.265838e-03	ci right 2.528435e-03	k: 1293	n:540000
HTRA3   540000 perm   205 sec   (2631 perm/sec)   p_kst 2.394444e-03   p_cons 1.429093e-01   p_joint 2.394444e-03

Joint ci ratio: 1.080111e-01	ci left: 2.260018e-03	ci right 2.519813e-03	k: 1313	n:550000
Cons ci ratio: 1.294400e-02	ci left: 1.419942e-01	ci right 1.438459e-01	k: 78605	n:550000
KS ci ratio: 1.080111e-01	ci left: 2.260018e-03	ci right 2.519813e-03	k: 1313	n:550000
HTRA3   550000 perm   211 sec   (2605 perm/sec)   p_kst 2.387273e-03   p_cons 1.429182e-01   p_joint 2.387273e-03

Joint ci ratio: 1.067187e-01	ci left: 2.275270e-03	ci right 2.533492e-03	k: 1345	n:560000
Cons ci ratio: 1.282961e-02	ci left: 1.419701e-01	ci right 1.438050e-01	k: 80016	n:560000
KS ci ratio: 1.067187e-01	ci left: 2.275270e-03	ci right 2.533492e-03	k: 1345	n:560000
HTRA3   560000 perm   217 sec   (2579 perm/sec)   p_kst 2.401786e-03   p_cons 1.428857e-01   p_joint 2.401786e-03

Joint ci ratio: 1.057412e-01	ci left: 2.278047e-03	ci right 2.534069e-03	k: 1370	n:570000
Cons ci ratio: 1.272358e-02	ci left: 1.418437e-01	ci right 1.436617e-01	k: 81368	n:570000
KS ci ratio: 1.057412e-01	ci left: 2.278047e-03	ci right 2.534069e-03	k: 1370	n:570000
HTRA3   570000 perm   223 sec   (2555 perm/sec)   p_kst 2.403509e-03   p_cons 1.427509e-01   p_joint 2.403509e-03

Joint ci ratio: 1.049030e-01	ci left: 2.275702e-03	ci right 2.529309e-03	k: 1392	n:580000
Cons ci ratio: 1.261462e-02	ci left: 1.418283e-01	ci right 1.436305e-01	k: 82782	n:580000
KS ci ratio: 1.049030e-01	ci left: 2.275702e-03	ci right 2.529309e-03	k: 1392	n:580000
HTRA3   580000 perm   229 sec   (2531 perm/sec)   p_kst 2.400000e-03   p_cons 1.427276e-01   p_joint 2.400000e-03

Joint ci ratio: 1.041953e-01	ci left: 2.268492e-03	ci right 2.519485e-03	k: 1411	n:590000
Cons ci ratio: 1.250980e-02	ci left: 1.417864e-01	ci right 1.435730e-01	k: 84180	n:590000
KS ci ratio: 1.041953e-01	ci left: 2.268492e-03	ci right 2.519485e-03	k: 1411	n:590000
HTRA3   590000 perm   235 sec   (2508 perm/sec)   p_kst 2.391525e-03   p_cons 1.426780e-01   p_joint 2.391525e-03

Joint ci ratio: 1.031769e-01	ci left: 2.276141e-03	ci right 2.525369e-03	k: 1439	n:600000
Cons ci ratio: 1.240315e-02	ci left: 1.418325e-01	ci right 1.436043e-01	k: 85630	n:600000
KS ci ratio: 1.031769e-01	ci left: 2.276141e-03	ci right 2.525369e-03	k: 1439	n:600000
HTRA3   600000 perm   242 sec   (2482 perm/sec)   p_kst 2.398333e-03   p_cons 1.427167e-01   p_joint 2.398333e-03

Joint ci ratio: 1.018408e-01	ci left: 2.299526e-03	ci right 2.547860e-03	k: 1477	n:610000
Cons ci ratio: 1.230364e-02	ci left: 1.417888e-01	ci right 1.435457e-01	k: 87026	n:610000
KS ci ratio: 1.018408e-01	ci left: 2.299526e-03	ci right 2.547860e-03	k: 1477	n:610000
HTRA3   610000 perm   248 sec   (2460 perm/sec)   p_kst 2.421311e-03   p_cons 1.426656e-01   p_joint 2.421311e-03

Joint ci ratio: 1.009565e-01	ci left: 2.303310e-03	ci right 2.549764e-03	k: 1503	n:620000
Cons ci ratio: 1.220342e-02	ci left: 1.418077e-01	ci right 1.435505e-01	k: 88460	n:620000
KS ci ratio: 1.009565e-01	ci left: 2.303310e-03	ci right 2.549764e-03	k: 1503	n:620000
HTRA3   620000 perm   254 sec   (2438 perm/sec)   p_kst 2.424194e-03   p_cons 1.426774e-01   p_joint 2.424194e-03

Joint ci ratio: 1.002263e-01	ci left: 2.300791e-03	ci right 2.545090e-03	k: 1525	n:630000
Cons ci ratio: 1.210687e-02	ci left: 1.418007e-01	ci right 1.435295e-01	k: 89878	n:630000
KS ci ratio: 1.002263e-01	ci left: 2.300791e-03	ci right 2.545090e-03	k: 1525	n:630000
HTRA3   630000 perm   261 sec   (2416 perm/sec)   p_kst 2.420635e-03   p_cons 1.426635e-01   p_joint 2.420635e-03

Joint ci ratio: 9.957626e-02	ci left: 2.295310e-03	ci right 2.537354e-03	k: 1545	n:640000
Cons ci ratio: 1.201596e-02	ci left: 1.417255e-01	ci right 1.434403e-01	k: 91252	n:640000
KS ci ratio: 9.957626e-02	ci left: 2.295310e-03	ci right 2.537354e-03	k: 1545	n:640000
HTRA3   640000 perm   267 sec   (2395 perm/sec)   p_kst 2.414062e-03   p_cons 1.425812e-01   p_joint 2.414062e-03

Outputting figure to mutsig2_images.part000000000082/HTRA3.2_1398_640000_0.0024141_0.14258_0.0024141.png
                gene_name: HTRA3
               theta_stop: 0.100 
                    nperm: 640000 
                     p_ks: 0.0024 
        ci_ks_bounds_left: 0.0023 
       ci_ks_bounds_right: 0.0025 
                   p_cons: 0.14 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.14 
                  p_joint: 0.0024 
     ci_joint_bounds_left: 0.0023 
    ci_joint_bounds_right: 0.0025 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000082
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 82 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1547>
Subject: Job 8704237: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1547>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000083> was used as the working directory.
Started at Thu Nov 15 19:33:29 2012
Results reported at Thu Nov 15 19:37:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000083.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000083.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 83  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000083.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    295.15 sec.
    Max Memory :      5792 MB
    Max Swap   :      8406 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
83
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 83
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 83: processing genes 7419 - 7509
Calculating significance of each gene.
Using projection method.
7419	IER3	1
7420	IER3IP1	1
7421	IER5	1
7422	IER5L	1
7423	IFFO1	1.901878e-02
7424	IFI16	6.292106e-02
7425	IFI27	1
7426	IFI27L1	1
7427	IFI27L2	1
7428	IFI30	1
7429	IFI35	1
7430	IFI44	1
7431	IFI44L	1
7432	IFI6	1
7433	IFIH1	1
7434	IFIT1	1
7435	IFIT1B	1
7436	IFIT2	1
7437	IFIT3	1
7438	IFIT5	1
7439	IFITM1	2.539718e-03
7440	IFITM2	1
7441	IFITM3	1
7442	IFITM5	1
7443	IFLTD1	1.044918e-01
7444	IFNA1	1
7445	IFNA10	1
7446	IFNA13	1
7447	IFNA14	1
7448	IFNA16	1
7449	IFNA17	1
7450	IFNA2	1
7451	IFNA21	1
7452	IFNA4	4.606662e-02
7453	IFNA5	1
7454	IFNA6	1
7455	IFNA7	1
7456	IFNA8	1
7457	IFNAR1	1
7458	IFNAR2	2.210911e-01
7459	IFNB1	1
7460	IFNE	5.318470e-02
7461	IFNG	1
In gene IFNGR1 the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 1495    n = 1	mu =   2.02e-07
7462	IFNGR1	2.322117e-02
7463	IFNGR2	1
7464	IFNK	1
7465	IFNW1	1
7466	IFRD1	1
7467	IFRD2	1
7468	IFT122	1
7469	IFT140	3.253151e-01
7470	IFT172	1
7471	IFT20	1
7472	IFT27	1
7473	IFT46	1.307564e-01
In gene IFT52 the following bins exceed PROBCAP:
    THCA-DJ-A2Q3-TP	categ 6	N = 1366    n = 1	mu =   1.36e-07
7474	IFT52	9.921201e-02
7475	IFT57	1
7476	IFT74	1
7477	IFT80	1
7478	IFT81	1
7479	IFT88	1
7480	IGBP1	1
7481	IGDCC3	1
In gene IGDCC4 the following bins exceed PROBCAP:
    THCA-EM-A22K-TP	categ 6	N = 3163    n = 1	mu =   1.01e-07
7482	IGDCC4	1.432068e-02
7483	IGF1	1
7484	IGF1R	4.608169e-01
7485	IGF2	1
7486	IGF2BP1	1
7487	IGF2BP2	1
7488	IGF2BP3	3.868389e-02
7489	IGF2R	6.605903e-01
7490	IGFALS	1
7491	IGFBP1	1
7492	IGFBP2	1
7493	IGFBP3	1
7494	IGFBP4	1
7495	IGFBP5	1
7496	IGFBP6	1
7497	IGFBP7	1
7498	IGFBPL1	1
7499	IGFL1	1
7500	IGFL2	1
7501	IGFL3	1
7502	IGFL4	3.229899e-02
7503	IGHMBP2	1
7504	IGJ	1
7505	IGLL1	1
7506	IGLL5	1
7507	IGLON5	1
7508	IGSF1	1.317444e-01
7509	IGSF10	1
Done

Running MutSig 2:
Scatter job 83: processing genes 7419 - 7509
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
IGDCC4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.934331e-02	ci left: 4.882520e-01	ci right 5.079491e-01	k: 4981	n:10000
Cons ci ratio: 1.398082e-02	ci left: 8.808366e-01	ci right 8.933369e-01	k: 8872	n:10000
KS ci ratio: 5.855114e-02	ci left: 3.003467e-01	ci right 3.185644e-01	k: 3094	n:10000
IGDCC4   10000 perm   2 sec   (4297 perm/sec)   p_kst 3.094000e-01   p_cons 8.872000e-01   p_joint 4.981000e-01

Outputting figure to mutsig2_images.part000000000083/IGDCC4.3_3833_10000_0.3094_0.8872_0.4981.png
                gene_name: IGDCC4
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 20 percent done.
IFFO1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.459463e-02	ci left: 4.260512e-01	ci right 4.455862e-01	k: 4358	n:10000
KS ci ratio: 1.854117e-02	ci left: 8.094827e-01	ci right 8.247321e-01	k: 8172	n:10000
IFFO1   10000 perm   2 sec   (6022 perm/sec)   p_kst 8.172000e-01   p_cons 4.358000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000083/IFFO1.2_1732_10000_0.8172_0.4358_1.png
                gene_name: IFFO1
               theta_stop: 0.045 
                    nperm: 10000 
                     p_ks: 0.82 
        ci_ks_bounds_left: 0.81 
       ci_ks_bounds_right: 0.82 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 40 percent done.
IFITM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.661901e-01	ci left: 4.830553e-02	ci right 5.715732e-02	k: 526	n:10000
Cons ci ratio: 2.381504e-02	ci left: 7.215864e-01	ci right 7.390793e-01	k: 7304	n:10000
KS ci ratio: 1.996961e-01	ci left: 3.338573e-02	ci right 4.088702e-02	k: 370	n:10000
IFITM1   10000 perm   1 sec   (7109 perm/sec)   p_kst 3.700000e-02   p_cons 7.304000e-01   p_joint 5.260000e-02

Joint ci ratio: 3.726903e-02	ci left: 3.494600e-01	ci right 3.627819e-01	k: 7122	n:20000
Cons ci ratio: 1.684005e-02	ci left: 7.241918e-01	ci right 7.365411e-01	k: 14608	n:20000
KS ci ratio: 1.380522e-01	ci left: 3.606913e-02	ci right 4.146602e-02	k: 774	n:20000
IFITM1   20000 perm   3 sec   (6162 perm/sec)   p_kst 3.870000e-02   p_cons 7.304000e-01   p_joint 3.561000e-01

Joint ci ratio: 3.402203e-02	ci left: 3.015174e-01	ci right 3.119867e-01	k: 9202	n:30000
Cons ci ratio: 1.463626e-02	ci left: 6.999036e-01	ci right 7.102566e-01	k: 21153	n:30000
KS ci ratio: 1.125941e-01	ci left: 3.664280e-02	ci right 4.104708e-02	k: 1164	n:30000
IFITM1   30000 perm   5 sec   (5766 perm/sec)   p_kst 3.880000e-02   p_cons 7.051000e-01   p_joint 3.067333e-01

Joint ci ratio: 3.658046e-02	ci left: 2.189533e-01	ci right 2.271369e-01	k: 8921	n:40000
Cons ci ratio: 1.272802e-02	ci left: 6.988716e-01	ci right 7.078489e-01	k: 28135	n:40000
KS ci ratio: 9.828030e-02	ci left: 3.636708e-02	ci right 4.015033e-02	k: 1529	n:40000
IFITM1   40000 perm   7 sec   (5499 perm/sec)   p_kst 3.822500e-02   p_cons 7.033750e-01   p_joint 2.230250e-01

Outputting figure to mutsig2_images.part000000000083/IFITM1.2_386_40000_0.038225_0.70337_0.22303.png
                gene_name: IFITM1
               theta_stop: 0.098 
                    nperm: 40000 
                     p_ks: 0.038 
        ci_ks_bounds_left: 0.036 
       ci_ks_bounds_right: 0.040 
                   p_cons: 0.70 
      ci_cons_bounds_left: 0.70 
     ci_cons_bounds_right: 0.71 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.22 
    ci_joint_bounds_right: 0.23 

Current progress: 60 percent done.
IFNGR1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.261969e-02	ci left: 7.415933e-01	ci right 7.586608e-01	k: 7502	n:10000
Cons ci ratio: 1.421012e-02	ci left: 8.774593e-01	ci right 8.901162e-01	k: 8839	n:10000
KS ci ratio: 8.260373e-02	ci left: 1.761532e-01	ci right 1.914315e-01	k: 1837	n:10000
IFNGR1   10000 perm   2 sec   (6376 perm/sec)   p_kst 1.837000e-01   p_cons 8.839000e-01   p_joint 7.502000e-01

Outputting figure to mutsig2_images.part000000000083/IFNGR1.2_1498_10000_0.1837_0.8839_0.7502.png
                gene_name: IFNGR1
               theta_stop: 0.083 
                    nperm: 10000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.18 
       ci_ks_bounds_right: 0.19 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.75 
     ci_joint_bounds_left: 0.74 
    ci_joint_bounds_right: 0.76 

Current progress: 80 percent done.
IGSF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.764274e-02	ci left: 2.428218e-01	ci right 2.599232e-01	k: 2513	n:10000
Cons ci ratio: 7.649036e-02	ci left: 1.999823e-01	ci right 2.159882e-01	k: 2079	n:10000
KS ci ratio: 3.407096e-02	ci left: 5.598265e-01	ci right 5.793330e-01	k: 5696	n:10000
IGSF1   10000 perm   2 sec   (5111 perm/sec)   p_kst 5.696000e-01   p_cons 2.079000e-01   p_joint 2.513000e-01

Outputting figure to mutsig2_images.part000000000083/IGSF1.2_4164_10000_0.5696_0.2079_0.2513.png
                gene_name: IGSF1
               theta_stop: 0.076 
                    nperm: 10000 
                     p_ks: 0.57 
        ci_ks_bounds_left: 0.56 
       ci_ks_bounds_right: 0.58 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.20 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.26 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000083
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 83 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1534>
Subject: Job 8704238: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1534>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000084> was used as the working directory.
Started at Thu Nov 15 19:33:36 2012
Results reported at Thu Nov 15 19:37:00 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000084.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000084.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 84  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000084.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    253.14 sec.
    Max Memory :      5698 MB
    Max Swap   :      8444 MB

    Max Processes  :         7
    Max Threads    :        57

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
84
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 84
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 84: processing genes 7510 - 7599
Calculating significance of each gene.
Using projection method.
7510	IGSF11	1
7511	IGSF21	1
7512	IGSF22	5.393304e-02
7513	IGSF3	1
7514	IGSF5	1
7515	IGSF6	1
7516	IGSF8	1
7517	IGSF9	1
7518	IGSF9B	1.931164e-01
7519	IHH	1
7520	IK	1.562298e-01
7521	IKBIP	1
7522	IKBKAP	1
7523	IKBKB	1
7524	IKBKE	1
7525	IKZF1	1
7526	IKZF2	1
7527	IKZF3	1
7528	IKZF4	1
7529	IKZF5	1
7530	IL10	1
7531	IL10RA	1
7532	IL10RB	1
7533	IL11	3.956905e-03
7534	IL11RA	1.738685e-01
7535	IL12A	1
7536	IL12B	1
7537	IL12RB1	1
7538	IL12RB2	8.579156e-02
7539	IL13	1
7540	IL13RA1	1
7541	IL13RA2	1
7542	IL15	1
7543	IL15RA	1
7544	IL16	1.057151e-01
7545	IL17A	1
7546	IL17B	1
7547	IL17C	1
7548	IL17D	1
7549	IL17F	1
7550	IL17RA	1
7551	IL17RB	1
7552	IL17RC	1
7553	IL17RD	1
7554	IL17RE	1
7555	IL17REL	2.454586e-02
7556	IL18	1
7557	IL18BP	1
7558	IL18R1	1
7559	IL18RAP	1.892355e-01
7560	IL19	1
7561	IL1A	1
7562	IL1B	1
7563	IL1F10	1
7564	IL1F5	1
7565	IL1F6	1
7566	IL1F7	1
7567	IL1F8	1
7568	IL1F9	1
7569	IL1R1	8.448198e-03
7570	IL1R2	1
7571	IL1RAP	1
7572	IL1RAPL1	1
7573	IL1RAPL2	1
7574	IL1RL1	1
7575	IL1RL2	1
7576	IL1RN	1
7577	IL2	1
7578	IL20	1
7579	IL20RA	1
7580	IL20RB	1
7581	IL21	1
7582	IL21R	1
7583	IL22	4.040884e-03
7584	IL22RA1	1
7585	IL22RA2	1
7586	IL23A	1
7587	IL23R	6.253483e-02
7588	IL24	1
7589	IL25	1
7590	IL26	1
7591	IL27	1
7592	IL27RA	1
7593	IL28A	1
7594	IL28B	1
7595	IL28RA	1
7596	IL29	8.209197e-02
7597	IL2RA	1.860003e-02
7598	IL2RB	1
7599	IL2RG	1
Done

Running MutSig 2:
Scatter job 84: processing genes 7510 - 7599
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
IGSF22
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.151217e-02	ci left: 5.977488e-01	ci right 6.169886e-01	k: 6074	n:10000
Cons ci ratio: 6.943212e-02	ci left: 2.332365e-01	ci right 2.501142e-01	k: 2416	n:10000
KS ci ratio: 1.723711e-02	ci left: 8.306303e-01	ci right 8.451723e-01	k: 8380	n:10000
IGSF22   10000 perm   2 sec   (4495 perm/sec)   p_kst 8.380000e-01   p_cons 2.416000e-01   p_joint 6.074000e-01

Outputting figure to mutsig2_images.part000000000084/IGSF22.2_4069_10000_0.838_0.2416_0.6074.png
                gene_name: IGSF22
               theta_stop: 0.069 
                    nperm: 10000 
                     p_ks: 0.84 
        ci_ks_bounds_left: 0.83 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.24 
      ci_cons_bounds_left: 0.23 
     ci_cons_bounds_right: 0.25 
                  p_joint: 0.61 
     ci_joint_bounds_left: 0.60 
    ci_joint_bounds_right: 0.62 

Current progress: 33 percent done.
IL16
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.116258e-02	ci left: 3.603273e-01	ci right 3.793486e-01	k: 3698	n:10000
Cons ci ratio: 1.581162e-01	ci left: 5.330545e-02	ci right 6.255418e-02	k: 578	n:10000
KS ci ratio: 1.819289e-02	ci left: 8.151724e-01	ci right 8.302391e-01	k: 8228	n:10000
IL16   10000 perm   2 sec   (4946 perm/sec)   p_kst 8.228000e-01   p_cons 5.780000e-02   p_joint 3.698000e-01

Joint ci ratio: 6.617712e-02	ci left: 1.442885e-01	ci right 1.542137e-01	k: 2984	n:20000
Cons ci ratio: 1.069412e-01	ci left: 5.957399e-02	ci right 6.635376e-02	k: 1258	n:20000
KS ci ratio: 1.300257e-02	ci left: 8.142502e-01	ci right 8.249568e-01	k: 16393	n:20000
IL16   20000 perm   5 sec   (4394 perm/sec)   p_kst 8.196500e-01   p_cons 6.290000e-02   p_joint 1.492000e-01

Joint ci ratio: 6.368344e-02	ci left: 1.085510e-01	ci right 1.157243e-01	k: 3363	n:30000
Cons ci ratio: 8.703532e-02	ci left: 6.057029e-02	ci right 6.611464e-02	k: 1899	n:30000
KS ci ratio: 1.071624e-02	ci left: 8.124427e-01	ci right 8.212292e-01	k: 24506	n:30000
IL16   30000 perm   7 sec   (4190 perm/sec)   p_kst 8.168667e-01   p_cons 6.330000e-02   p_joint 1.121000e-01

Outputting figure to mutsig2_images.part000000000084/IL16.2_4071_30000_0.81687_0.0633_0.1121.png
                gene_name: IL16
               theta_stop: 0.087 
                    nperm: 30000 
                     p_ks: 0.82 
        ci_ks_bounds_left: 0.81 
       ci_ks_bounds_right: 0.82 
                   p_cons: 0.063 
      ci_cons_bounds_left: 0.061 
     ci_cons_bounds_right: 0.066 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.11 
    ci_joint_bounds_right: 0.12 

Current progress: 67 percent done.
IL1R1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.006139e-02	ci left: 3.704727e-01	ci right 3.895972e-01	k: 3800	n:10000
Cons ci ratio: 1.066050e-01	ci left: 1.127155e-01	ci right 1.255073e-01	k: 1190	n:10000
KS ci ratio: 1.658537e-02	ci left: 8.410158e-01	ci right 8.551807e-01	k: 8482	n:10000
IL1R1   10000 perm   2 sec   (6382 perm/sec)   p_kst 8.482000e-01   p_cons 1.190000e-01   p_joint 3.800000e-01

Joint ci ratio: 6.491661e-02	ci left: 1.491711e-01	ci right 1.592296e-01	k: 3083	n:20000
Cons ci ratio: 8.077409e-02	ci left: 1.010787e-01	ci right 1.096364e-01	k: 2106	n:20000
KS ci ratio: 1.175877e-02	ci left: 8.424421e-01	ci right 8.524566e-01	k: 16950	n:20000
IL1R1   20000 perm   4 sec   (5514 perm/sec)   p_kst 8.475000e-01   p_cons 1.053000e-01   p_joint 1.541500e-01

Outputting figure to mutsig2_images.part000000000084/IL1R1.2_1750_20000_0.8475_0.1053_0.15415.png
                gene_name: IL1R1
               theta_stop: 0.081 
                    nperm: 20000 
                     p_ks: 0.85 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.11 
      ci_cons_bounds_left: 0.10 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.15 
     ci_joint_bounds_left: 0.15 
    ci_joint_bounds_right: 0.16 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000084
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 84 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1702>
Subject: Job 8704240: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1702>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000085> was used as the working directory.
Started at Thu Nov 15 19:33:43 2012
Results reported at Thu Nov 15 22:27:56 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000085.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000085.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 85  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000085.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10639.67 sec.
    Max Memory :      6035 MB
    Max Swap   :      8773 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
85
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 85
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 85: processing genes 7600 - 7690
Calculating significance of each gene.
Using projection method.
7600	IL3	1
7601	IL31	1
7602	IL31RA	1
7603	IL32	2.511010e-05
7604	IL33	4.609201e-02
7605	IL34	1
7606	IL3RA	1
7607	IL4	1
7608	IL4I1	1
7609	IL4R	1
7610	IL5	1
7611	IL5RA	1
7612	IL6	1
7613	IL6R	1
7614	IL6ST	1
7615	IL7	1
7616	IL7R	6.942196e-03
7617	IL8	1
7618	IL9	1
7619	IL9R	1
7620	ILDR1	1
7621	ILDR2	7.405354e-02
7622	ILF2	1
7623	ILF3	1
7624	ILK	1
7625	ILKAP	1
7626	ILVBL	1
7627	IMMP1L	1
7628	IMMP2L	1
7629	IMMT	1
7630	IMP3	1
7631	IMP4	1
7632	IMP5	1.006530e-01
7633	IMPA1	1
7634	IMPA2	1
7635	IMPACT	1
7636	IMPAD1	1
7637	IMPDH1	1
7638	IMPDH2	2.295821e-02
7639	IMPG1	1
7640	IMPG2	1
7641	INA	1
In gene INADL the following bins exceed PROBCAP:
    THCA-EM-A2CU-TP	categ 6	N = 5428    n = 1	mu =   1.08e-07
7642	INADL	3.488734e-01
7643	INCA1	1
7644	INCENP	1
7645	INF2	1
7646	ING1	1
7647	ING2	1
7648	ING3	1
7649	ING4	1
7650	ING5	1.714013e-02
7651	INHA	1
7652	INHBA	4.763540e-03
7653	INHBB	1
7654	INHBC	4.806255e-02
7655	INHBE	2.246335e-02
7656	INMT	1
7657	INO80	4.768546e-01
7658	INO80B	1
7659	INO80C	1
7660	INO80D	1
7661	INO80E	2.689933e-02
7662	INPP1	1
7663	INPP4A	1
7664	INPP4B	1
7665	INPP5A	1
7666	INPP5B	1
7667	INPP5D	2.753528e-01
7668	INPP5E	1
7669	INPP5F	3.137258e-02
7670	INPP5J	1
7671	INPP5K	1
7672	INPPL1	1
7673	INS	1
7674	INS-IGF2	1
7675	INSC	1
7676	INSIG1	1
7677	INSIG2	1
7678	INSL3	1
7679	INSL4	1
7680	INSL5	1
7681	INSL6	1
7682	INSM1	1
7683	INSM2	1
7684	INSR	1
7685	INSRR	1
7686	INTS1	1.117120e-01
7687	INTS10	1
7688	INTS12	1
7689	INTS2	1
7690	INTS3	1.743134e-01
Done

Running MutSig 2:
Scatter job 85: processing genes 7600 - 7690
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
IL32
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.809000e-01	ci left: 5.020040e-03	ci right 8.277383e-03	k: 65	n:10000
Cons ci ratio: 1.215078e-02	ci left: 9.066881e-01	ci right 9.178704e-01	k: 9124	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
IL32   10000 perm   1 sec   (6855 perm/sec)   p_kst 1.000000e-04   p_cons 9.124000e-01   p_joint 6.500000e-03

Joint ci ratio: 5.772931e-01	ci left: 1.641624e-03	ci right 3.009532e-03	k: 45	n:20000
Cons ci ratio: 8.449933e-03	ci left: 9.110494e-01	ci right 9.188295e-01	k: 18300	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
IL32   20000 perm   5 sec   (3823 perm/sec)   p_kst 5.000000e-05   p_cons 9.150000e-01   p_joint 2.250000e-03

Joint ci ratio: 4.819796e-01	ci left: 1.672573e-03	ci right 2.760773e-03	k: 65	n:30000
Cons ci ratio: 6.826232e-03	ci left: 9.134481e-01	ci right 9.197377e-01	k: 27499	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
IL32   30000 perm   7 sec   (4227 perm/sec)   p_kst 3.333333e-05   p_cons 9.166333e-01   p_joint 2.166667e-03

Joint ci ratio: 4.552634e-01	ci left: 1.430773e-03	ci right 2.294124e-03	k: 73	n:40000
Cons ci ratio: 5.884709e-03	ci left: 9.145833e-01	ci right 9.200059e-01	k: 36693	n:40000
KS ci ratio: 2.263100e+00	ci left: 6.055289e-06	ci right 1.806054e-04	k: 2	n:40000
IL32   40000 perm   9 sec   (4441 perm/sec)   p_kst 5.000000e-05   p_cons 9.173250e-01   p_joint 1.825000e-03

Joint ci ratio: 4.975268e-01	ci left: 9.333279e-04	ci right 1.566869e-03	k: 61	n:50000
Cons ci ratio: 5.263512e-03	ci left: 9.148718e-01	ci right 9.197196e-01	k: 45866	n:50000
KS ci ratio: 2.263123e+00	ci left: 4.844222e-06	ci right 1.444862e-04	k: 2	n:50000
IL32   50000 perm   11 sec   (4545 perm/sec)   p_kst 4.000000e-05   p_cons 9.173200e-01   p_joint 1.220000e-03

Joint ci ratio: 5.283260e-01	ci left: 6.761778e-04	ci right 1.174144e-03	k: 54	n:60000
Cons ci ratio: 4.804421e-03	ci left: 9.151013e-01	ci right 9.195249e-01	k: 55040	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
IL32   60000 perm   13 sec   (4593 perm/sec)   p_kst 1.666667e-05   p_cons 9.173333e-01   p_joint 9.000000e-04

Joint ci ratio: 6.624305e-01	ci left: 3.363940e-04	ci right 6.786715e-04	k: 34	n:70000
Cons ci ratio: 4.443936e-03	ci left: 9.154085e-01	ci right 9.194997e-01	k: 64223	n:70000
KS ci ratio: 2.263148e+00	ci left: 3.460151e-06	ci right 1.032060e-04	k: 2	n:70000
IL32   70000 perm   15 sec   (4601 perm/sec)   p_kst 2.857143e-05   p_cons 9.174714e-01   p_joint 4.857143e-04

Joint ci ratio: 5.017101e-01	ci left: 5.723763e-04	ci right 9.652947e-04	k: 60	n:80000
Cons ci ratio: 4.337752e-03	ci left: 9.087911e-01	ci right 9.127541e-01	k: 72863	n:80000
KS ci ratio: 2.263156e+00	ci left: 3.027630e-06	ci right 9.030565e-05	k: 2	n:80000
IL32   80000 perm   17 sec   (4581 perm/sec)   p_kst 2.500000e-05   p_cons 9.107875e-01   p_joint 7.500000e-04

Joint ci ratio: 5.101704e-01	ci left: 4.893889e-04	ci right 8.330153e-04	k: 58	n:90000
Cons ci ratio: 4.091294e-03	ci left: 9.088405e-01	ci right 9.125774e-01	k: 81965	n:90000
KS ci ratio: 2.263163e+00	ci left: 2.691226e-06	ci right 8.027198e-05	k: 2	n:90000
IL32   90000 perm   20 sec   (4549 perm/sec)   p_kst 2.222222e-05   p_cons 9.107222e-01   p_joint 6.444444e-04

Joint ci ratio: 5.716535e-01	ci left: 3.367969e-04	ci right 6.135284e-04	k: 46	n:100000
Cons ci ratio: 3.878993e-03	ci left: 9.090366e-01	ci right 9.125795e-01	k: 91082	n:100000
KS ci ratio: 2.263168e+00	ci left: 2.422102e-06	ci right 7.224499e-05	k: 2	n:100000
IL32   100000 perm   22 sec   (4507 perm/sec)   p_kst 2.000000e-05   p_cons 9.108200e-01   p_joint 4.600000e-04

Joint ci ratio: 5.842369e-01	ci left: 2.906552e-04	ci right 5.369445e-04	k: 44	n:110000
Cons ci ratio: 3.702228e-03	ci left: 9.089535e-01	ci right 9.123339e-01	k: 100172	n:110000
KS ci ratio: 2.263172e+00	ci left: 2.201910e-06	ci right 6.567742e-05	k: 2	n:110000
IL32   110000 perm   25 sec   (4459 perm/sec)   p_kst 1.818182e-05   p_cons 9.106545e-01   p_joint 4.000000e-04

Joint ci ratio: 3.669657e-01	ci left: 7.761277e-04	ci right 1.132035e-03	k: 113	n:120000
Cons ci ratio: 3.391149e-03	ci left: 9.160299e-01	ci right 9.191498e-01	k: 110112	n:120000
KS ci ratio: 1.959959e+00	ci left: 5.155631e-06	ci right 7.305885e-05	k: 3	n:120000
IL32   120000 perm   27 sec   (4394 perm/sec)   p_kst 2.500000e-05   p_cons 9.176000e-01   p_joint 9.416667e-04

Joint ci ratio: 3.504455e-01	ci left: 7.934205e-04	ci right 1.137160e-03	k: 124	n:130000
Cons ci ratio: 3.266050e-03	ci left: 9.157198e-01	ci right 9.187231e-01	k: 119240	n:130000
KS ci ratio: 1.959962e+00	ci left: 4.759042e-06	ci right 6.743907e-05	k: 3	n:130000
IL32   130000 perm   30 sec   (4307 perm/sec)   p_kst 2.307692e-05   p_cons 9.172308e-01   p_joint 9.538462e-04

Joint ci ratio: 3.410301e-01	ci left: 7.824059e-04	ci right 1.110260e-03	k: 131	n:140000
Cons ci ratio: 3.147580e-03	ci left: 9.157586e-01	ci right 9.186526e-01	k: 128410	n:140000
KS ci ratio: 1.959965e+00	ci left: 4.419108e-06	ci right 6.262209e-05	k: 3	n:140000
IL32   140000 perm   33 sec   (4259 perm/sec)   p_kst 2.142857e-05   p_cons 9.172143e-01   p_joint 9.357143e-04

Joint ci ratio: 3.209783e-01	ci left: 8.341730e-04	ci right 1.158947e-03	k: 148	n:150000
Cons ci ratio: 3.039262e-03	ci left: 9.158880e-01	ci right 9.186825e-01	k: 137594	n:150000
KS ci ratio: 1.600296e+00	ci left: 1.082333e-05	ci right 7.778715e-05	k: 5	n:150000
IL32   150000 perm   36 sec   (4209 perm/sec)   p_kst 3.333333e-05   p_cons 9.172933e-01   p_joint 9.866667e-04

Joint ci ratio: 3.335476e-01	ci left: 7.189255e-04	ci right 1.012149e-03	k: 137	n:160000
Cons ci ratio: 2.941770e-03	ci left: 9.159838e-01	ci right 9.186886e-01	k: 146775	n:160000
KS ci ratio: 1.600298e+00	ci left: 1.014687e-05	ci right 7.292556e-05	k: 5	n:160000
IL32   160000 perm   38 sec   (4156 perm/sec)   p_kst 3.125000e-05   p_cons 9.173438e-01   p_joint 8.562500e-04

Joint ci ratio: 3.788403e-01	ci left: 5.105221e-04	ci right 7.540916e-04	k: 106	n:170000
Cons ci ratio: 2.846447e-03	ci left: 9.164250e-01	ci right 9.190431e-01	k: 156016	n:170000
KS ci ratio: 1.600300e+00	ci left: 9.549987e-06	ci right 6.863590e-05	k: 5	n:170000
IL32   170000 perm   42 sec   (4090 perm/sec)   p_kst 2.941176e-05   p_cons 9.177412e-01   p_joint 6.235294e-04

Joint ci ratio: 3.686458e-01	ci left: 5.123626e-04	ci right 7.486477e-04	k: 112	n:180000
Cons ci ratio: 2.762723e-03	ci left: 9.166559e-01	ci right 9.191973e-01	k: 165228	n:180000
KS ci ratio: 1.600302e+00	ci left: 9.019428e-06	ci right 6.482287e-05	k: 5	n:180000
IL32   180000 perm   45 sec   (4034 perm/sec)   p_kst 2.777778e-05   p_cons 9.179333e-01   p_joint 6.222222e-04

Joint ci ratio: 3.607522e-01	ci left: 5.093005e-04	ci right 7.379624e-04	k: 117	n:190000
Cons ci ratio: 2.690756e-03	ci left: 9.165930e-01	ci right 9.190679e-01	k: 174389	n:190000
KS ci ratio: 1.600304e+00	ci left: 8.544719e-06	ci right 6.141120e-05	k: 5	n:190000
IL32   190000 perm   48 sec   (3945 perm/sec)   p_kst 2.631579e-05   p_cons 9.178368e-01   p_joint 6.157895e-04

Joint ci ratio: 3.622972e-01	ci left: 4.792882e-04	ci right 6.956145e-04	k: 116	n:200000
Cons ci ratio: 2.626477e-03	ci left: 9.164014e-01	ci right 9.188164e-01	k: 183523	n:200000
KS ci ratio: 1.600305e+00	ci left: 8.117480e-06	ci right 5.834069e-05	k: 5	n:200000
IL32   200000 perm   51 sec   (3894 perm/sec)   p_kst 2.500000e-05   p_cons 9.176150e-01   p_joint 5.800000e-04

Joint ci ratio: 3.547962e-01	ci left: 4.781299e-04	ci right 6.884354e-04	k: 121	n:210000
Cons ci ratio: 2.561413e-03	ci left: 9.165356e-01	ci right 9.188909e-01	k: 192721	n:210000
KS ci ratio: 1.600307e+00	ci left: 7.730931e-06	ci right 5.556260e-05	k: 5	n:210000
IL32   210000 perm   55 sec   (3828 perm/sec)   p_kst 2.380952e-05   p_cons 9.177190e-01   p_joint 5.761905e-04

Joint ci ratio: 3.450348e-01	ci left: 4.854193e-04	ci right 6.917457e-04	k: 128	n:220000
Cons ci ratio: 2.499671e-03	ci left: 9.167360e-01	ci right 9.190348e-01	k: 201936	n:220000
KS ci ratio: 1.600308e+00	ci left: 7.379523e-06	ci right 5.303707e-05	k: 5	n:220000
IL32   220000 perm   58 sec   (3783 perm/sec)   p_kst 2.272727e-05   p_cons 9.178909e-01   p_joint 5.818182e-04

Joint ci ratio: 3.372801e-01	ci left: 4.881666e-04	ci right 6.899829e-04	k: 134	n:230000
Cons ci ratio: 2.444718e-03	ci left: 9.167619e-01	ci right 9.190102e-01	k: 211115	n:230000
KS ci ratio: 1.481595e+00	ci left: 9.573512e-06	ci right 5.677945e-05	k: 6	n:230000
IL32   230000 perm   62 sec   (3738 perm/sec)   p_kst 2.608696e-05   p_cons 9.178913e-01   p_joint 5.826087e-04

Joint ci ratio: 3.232164e-01	ci left: 5.136839e-04	ci right 7.153610e-04	k: 146	n:240000
Cons ci ratio: 2.394956e-03	ci left: 9.166772e-01	ci right 9.188794e-01	k: 220268	n:240000
KS ci ratio: 1.385903e+00	ci left: 1.172659e-05	ci right 6.009355e-05	k: 7	n:240000
IL32   240000 perm   65 sec   (3694 perm/sec)   p_kst 2.916667e-05   p_cons 9.177833e-01   p_joint 6.083333e-04

Joint ci ratio: 3.424016e-01	ci left: 4.344764e-04	ci right 6.174277e-04	k: 130	n:250000
Cons ci ratio: 2.348546e-03	ci left: 9.165716e-01	ci right 9.187307e-01	k: 229414	n:250000
KS ci ratio: 1.385904e+00	ci left: 1.125752e-05	ci right 5.768985e-05	k: 7	n:250000
IL32   250000 perm   69 sec   (3647 perm/sec)   p_kst 2.800000e-05   p_cons 9.176560e-01   p_joint 5.200000e-04

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.418790e-05	k: 0	n:260000
Cons ci ratio: 2.303146e-03	ci left: 9.165790e-01	ci right 9.186963e-01	k: 238587	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
IL32   260000 perm   72 sec   (3601 perm/sec)   p_kst 3.846154e-06   p_cons 9.176423e-01   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.366242e-05	k: 0	n:270000
Cons ci ratio: 2.259727e-03	ci left: 9.166235e-01	ci right 9.187008e-01	k: 247770	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
IL32   270000 perm   76 sec   (3539 perm/sec)   p_kst 3.703704e-06   p_cons 9.176667e-01   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.317448e-05	k: 0	n:280000
Cons ci ratio: 2.218045e-03	ci left: 9.167083e-01	ci right 9.187474e-01	k: 256965	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
IL32   280000 perm   80 sec   (3501 perm/sec)   p_kst 3.571429e-06   p_cons 9.177321e-01   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.272019e-05	k: 0	n:290000
Cons ci ratio: 2.181423e-03	ci left: 9.165898e-01	ci right 9.185949e-01	k: 266103	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
IL32   290000 perm   84 sec   (3454 perm/sec)   p_kst 3.448276e-06   p_cons 9.175966e-01   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.229619e-05	k: 0	n:300000
Cons ci ratio: 2.144897e-03	ci left: 9.165969e-01	ci right 9.185683e-01	k: 275276	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
IL32   300000 perm   88 sec   (3419 perm/sec)   p_kst 3.333333e-06   p_cons 9.175867e-01   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.189954e-05	k: 0	n:310000
Cons ci ratio: 2.109201e-03	ci left: 9.166719e-01	ci right 9.186106e-01	k: 284470	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
IL32   310000 perm   92 sec   (3374 perm/sec)   p_kst 3.225806e-06   p_cons 9.176452e-01   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.152768e-05	k: 0	n:320000
Cons ci ratio: 2.077375e-03	ci left: 9.165854e-01	ci right 9.184945e-01	k: 293614	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
IL32   320000 perm   96 sec   (3328 perm/sec)   p_kst 3.125000e-06   p_cons 9.175437e-01   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.117836e-05	k: 0	n:330000
Cons ci ratio: 2.045880e-03	ci left: 9.165835e-01	ci right 9.184637e-01	k: 302784	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
IL32   330000 perm   100 sec   (3284 perm/sec)   p_kst 3.030303e-06   p_cons 9.175273e-01   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.084959e-05	k: 0	n:340000
Cons ci ratio: 2.014991e-03	ci left: 9.166411e-01	ci right 9.184929e-01	k: 311974	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
IL32   340000 perm   105 sec   (3251 perm/sec)   p_kst 2.941176e-06   p_cons 9.175706e-01   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.053960e-05	k: 0	n:350000
Cons ci ratio: 1.986848e-03	ci left: 9.165894e-01	ci right 9.184151e-01	k: 321127	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
IL32   350000 perm   109 sec   (3218 perm/sec)   p_kst 2.857143e-06   p_cons 9.175057e-01   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.024683e-05	k: 0	n:360000
Cons ci ratio: 1.958844e-03	ci left: 9.166189e-01	ci right 9.184189e-01	k: 330308	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
IL32   360000 perm   113 sec   (3176 perm/sec)   p_kst 2.777778e-06   p_cons 9.175222e-01   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 9.969895e-06	k: 0	n:370000
Cons ci ratio: 1.931440e-03	ci left: 9.166904e-01	ci right 9.184653e-01	k: 339505	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
IL32   370000 perm   118 sec   (3142 perm/sec)   p_kst 2.702703e-06   p_cons 9.175811e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.707530e-06	k: 0	n:380000
Cons ci ratio: 1.906712e-03	ci left: 9.166340e-01	ci right 9.183860e-01	k: 348655	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
IL32   380000 perm   122 sec   (3110 perm/sec)   p_kst 2.631579e-06   p_cons 9.175132e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.458621e-06	k: 0	n:390000
Cons ci ratio: 1.881346e-03	ci left: 9.167069e-01	ci right 9.184356e-01	k: 357854	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
IL32   390000 perm   127 sec   (3081 perm/sec)   p_kst 2.564103e-06   p_cons 9.175744e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.222156e-06	k: 0	n:400000
Cons ci ratio: 1.855830e-03	ci left: 9.168692e-01	ci right 9.185748e-01	k: 367090	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
IL32   400000 perm   131 sec   (3051 perm/sec)   p_kst 2.500000e-06   p_cons 9.177250e-01   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 8.997226e-06	k: 0	n:410000
Cons ci ratio: 1.832946e-03	ci left: 9.168889e-01	ci right 9.185735e-01	k: 376271	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
IL32   410000 perm   136 sec   (3021 perm/sec)   p_kst 2.439024e-06   p_cons 9.177341e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.783008e-06	k: 0	n:420000
Cons ci ratio: 1.809947e-03	ci left: 9.169868e-01	ci right 9.186503e-01	k: 385485	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
IL32   420000 perm   140 sec   (2991 perm/sec)   p_kst 2.380952e-06   p_cons 9.178214e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.578753e-06	k: 0	n:430000
Cons ci ratio: 1.788810e-03	ci left: 9.169937e-01	ci right 9.186378e-01	k: 394662	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
IL32   430000 perm   145 sec   (2963 perm/sec)   p_kst 2.325581e-06   p_cons 9.178186e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.383782e-06	k: 0	n:440000
Cons ci ratio: 1.767545e-03	ci left: 9.170736e-01	ci right 9.186982e-01	k: 403871	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
IL32   440000 perm   150 sec   (2934 perm/sec)   p_kst 2.272727e-06   p_cons 9.178886e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.197476e-06	k: 0	n:450000
Cons ci ratio: 1.747070e-03	ci left: 9.171455e-01	ci right 9.187514e-01	k: 413078	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
IL32   450000 perm   155 sec   (2906 perm/sec)   p_kst 2.222222e-06   p_cons 9.179511e-01   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.019271e-06	k: 0	n:460000
Cons ci ratio: 1.729384e-03	ci left: 9.170309e-01	ci right 9.186203e-01	k: 422201	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
IL32   460000 perm   160 sec   (2879 perm/sec)   p_kst 2.173913e-06   p_cons 9.178283e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.848649e-06	k: 0	n:470000
Cons ci ratio: 1.787752e-03	ci left: 9.101332e-01	ci right 9.117638e-01	k: 428147	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
IL32   470000 perm   165 sec   (2851 perm/sec)   p_kst 2.127660e-06   p_cons 9.109511e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.685136e-06	k: 0	n:480000
Cons ci ratio: 1.770110e-03	ci left: 9.100424e-01	ci right 9.116568e-01	k: 437209	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
IL32   480000 perm   170 sec   (2823 perm/sec)   p_kst 2.083333e-06   p_cons 9.108521e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.528297e-06	k: 0	n:490000
Cons ci ratio: 1.752318e-03	ci left: 9.100169e-01	ci right 9.116150e-01	k: 446301	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
IL32   490000 perm   175 sec   (2796 perm/sec)   p_kst 2.040816e-06   p_cons 9.108184e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.377732e-06	k: 0	n:500000
Cons ci ratio: 1.733813e-03	ci left: 9.101090e-01	ci right 9.116903e-01	k: 455451	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
IL32   500000 perm   181 sec   (2770 perm/sec)   p_kst 2.000000e-06   p_cons 9.109020e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.233071e-06	k: 0	n:510000
Cons ci ratio: 1.715860e-03	ci left: 9.101995e-01	ci right 9.117645e-01	k: 464602	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
IL32   510000 perm   186 sec   (2744 perm/sec)   p_kst 1.960784e-06   p_cons 9.109843e-01   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.093974e-06	k: 0	n:520000
Cons ci ratio: 1.697867e-03	ci left: 9.103425e-01	ci right 9.118914e-01	k: 473782	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
IL32   520000 perm   191 sec   (2718 perm/sec)   p_kst 1.923077e-06   p_cons 9.111192e-01   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.960126e-06	k: 0	n:530000
Cons ci ratio: 1.682169e-03	ci left: 9.103117e-01	ci right 9.118461e-01	k: 482873	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
IL32   530000 perm   197 sec   (2689 perm/sec)   p_kst 1.886792e-06   p_cons 9.110811e-01   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.831235e-06	k: 0	n:540000
Cons ci ratio: 1.666573e-03	ci left: 9.103136e-01	ci right 9.118338e-01	k: 491981	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
IL32   540000 perm   203 sec   (2665 perm/sec)   p_kst 1.851852e-06   p_cons 9.110759e-01   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.707031e-06	k: 0	n:550000
Cons ci ratio: 1.650978e-03	ci left: 9.103576e-01	ci right 9.118636e-01	k: 501112	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
IL32   550000 perm   208 sec   (2641 perm/sec)   p_kst 1.818182e-06   p_cons 9.111127e-01   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.587263e-06	k: 0	n:560000
Cons ci ratio: 1.636479e-03	ci left: 9.103337e-01	ci right 9.118264e-01	k: 510206	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
IL32   560000 perm   214 sec   (2617 perm/sec)   p_kst 1.785714e-06   p_cons 9.110821e-01   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.471697e-06	k: 0	n:570000
Cons ci ratio: 1.622128e-03	ci left: 9.103335e-01	ci right 9.118131e-01	k: 519313	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
IL32   570000 perm   220 sec   (2593 perm/sec)   p_kst 1.754386e-06   p_cons 9.110754e-01   p_joint 0

Joint ci ratio: 6.929449e-01	ci left: 3.631579e-05	ci right 7.586471e-05	k: 31	n:580000
Cons ci ratio: 1.607805e-03	ci left: 9.103681e-01	ci right 9.118347e-01	k: 528440	n:580000
KS ci ratio: 2.263205e+00	ci left: 4.176025e-07	ci right 1.245630e-05	k: 2	n:580000
IL32   580000 perm   226 sec   (2570 perm/sec)   p_kst 3.448276e-06   p_cons 9.111034e-01   p_joint 5.344828e-05

Joint ci ratio: 4.178419e-01	ci left: 1.181091e-04	ci right 1.818853e-04	k: 87	n:590000
Cons ci ratio: 1.594155e-03	ci left: 9.103709e-01	ci right 9.118250e-01	k: 537549	n:590000
KS ci ratio: 1.959992e+00	ci left: 1.048598e-06	ci right 1.485971e-05	k: 3	n:590000
IL32   590000 perm   232 sec   (2548 perm/sec)   p_kst 5.084746e-06   p_cons 9.111000e-01   p_joint 1.474576e-04

Joint ci ratio: 4.178424e-01	ci left: 1.161406e-04	ci right 1.788539e-04	k: 87	n:600000
Cons ci ratio: 1.579920e-03	ci left: 9.104691e-01	ci right 9.119103e-01	k: 546715	n:600000
KS ci ratio: 1.959992e+00	ci left: 1.031121e-06	ci right 1.461205e-05	k: 3	n:600000
IL32   600000 perm   238 sec   (2526 perm/sec)   p_kst 5.000000e-06   p_cons 9.111917e-01   p_joint 1.450000e-04

Joint ci ratio: 4.178429e-01	ci left: 1.142367e-04	ci right 1.759220e-04	k: 87	n:610000
Cons ci ratio: 1.567486e-03	ci left: 9.104159e-01	ci right 9.118457e-01	k: 555791	n:610000
KS ci ratio: 1.959992e+00	ci left: 1.014218e-06	ci right 1.437251e-05	k: 3	n:610000
IL32   610000 perm   244 sec   (2503 perm/sec)   p_kst 4.918033e-06   p_cons 9.111328e-01   p_joint 1.426230e-04

Joint ci ratio: 4.154890e-01	ci left: 1.138379e-04	ci right 1.748656e-04	k: 88	n:620000
Cons ci ratio: 1.554845e-03	ci left: 9.104164e-01	ci right 9.118346e-01	k: 564899	n:620000
KS ci ratio: 1.959992e+00	ci left: 9.978594e-07	ci right 1.414070e-05	k: 3	n:620000
IL32   620000 perm   250 sec   (2482 perm/sec)   p_kst 4.838710e-06   p_cons 9.111274e-01   p_joint 1.419355e-04

Joint ci ratio: 4.154895e-01	ci left: 1.120309e-04	ci right 1.720900e-04	k: 88	n:630000
Cons ci ratio: 1.542671e-03	ci left: 9.103993e-01	ci right 9.118064e-01	k: 573996	n:630000
KS ci ratio: 1.959992e+00	ci left: 9.820203e-07	ci right 1.391624e-05	k: 3	n:630000
IL32   630000 perm   256 sec   (2461 perm/sec)   p_kst 4.761905e-06   p_cons 9.111048e-01   p_joint 1.396825e-04

Joint ci ratio: 4.276787e-01	ci left: 1.032967e-04	ci right 1.607647e-04	k: 83	n:640000
Cons ci ratio: 1.531030e-03	ci left: 9.103562e-01	ci right 9.117526e-01	k: 583076	n:640000
KS ci ratio: 1.959992e+00	ci left: 9.666762e-07	ci right 1.369880e-05	k: 3	n:640000
IL32   640000 perm   263 sec   (2437 perm/sec)   p_kst 4.687500e-06   p_cons 9.110563e-01   p_joint 1.296875e-04

Joint ci ratio: 4.202397e-01	ci left: 1.058304e-04	ci right 1.633964e-04	k: 86	n:650000
Cons ci ratio: 1.518869e-03	ci left: 9.103978e-01	ci right 9.117831e-01	k: 592210	n:650000
KS ci ratio: 1.959992e+00	ci left: 9.518043e-07	ci right 1.348805e-05	k: 3	n:650000
IL32   650000 perm   269 sec   (2416 perm/sec)   p_kst 4.615385e-06   p_cons 9.110923e-01   p_joint 1.323077e-04

Joint ci ratio: 4.178452e-01	ci left: 1.055823e-04	ci right 1.625947e-04	k: 87	n:660000
Cons ci ratio: 1.507430e-03	ci left: 9.103911e-01	ci right 9.117659e-01	k: 601313	n:660000
KS ci ratio: 1.959993e+00	ci left: 9.373830e-07	ci right 1.328369e-05	k: 3	n:660000
IL32   660000 perm   276 sec   (2395 perm/sec)   p_kst 4.545455e-06   p_cons 9.110803e-01   p_joint 1.318182e-04

Joint ci ratio: 4.178456e-01	ci left: 1.040064e-04	ci right 1.601680e-04	k: 87	n:670000
Cons ci ratio: 1.495570e-03	ci left: 9.104579e-01	ci right 9.118221e-01	k: 610465	n:670000
KS ci ratio: 1.959993e+00	ci left: 9.233922e-07	ci right 1.308543e-05	k: 3	n:670000
IL32   670000 perm   282 sec   (2374 perm/sec)   p_kst 4.477612e-06   p_cons 9.111418e-01   p_joint 1.298507e-04

Joint ci ratio: 4.202409e-01	ci left: 1.011614e-04	ci right 1.561878e-04	k: 86	n:680000
Cons ci ratio: 1.484552e-03	ci left: 9.104609e-01	ci right 9.118150e-01	k: 619575	n:680000
KS ci ratio: 1.959993e+00	ci left: 9.098129e-07	ci right 1.289299e-05	k: 3	n:680000
IL32   680000 perm   289 sec   (2354 perm/sec)   p_kst 4.411765e-06   p_cons 9.111397e-01   p_joint 1.264706e-04

Joint ci ratio: 4.178465e-01	ci left: 1.009917e-04	ci right 1.555255e-04	k: 87	n:690000
Cons ci ratio: 1.473272e-03	ci left: 9.105191e-01	ci right 9.118630e-01	k: 628723	n:690000
KS ci ratio: 1.959993e+00	ci left: 8.966272e-07	ci right 1.270614e-05	k: 3	n:690000
IL32   690000 perm   296 sec   (2333 perm/sec)   p_kst 4.347826e-06   p_cons 9.111928e-01   p_joint 1.260870e-04

Joint ci ratio: 4.154925e-01	ci left: 1.008277e-04	ci right 1.548813e-04	k: 88	n:700000
Cons ci ratio: 1.463690e-03	ci left: 9.104151e-01	ci right 9.117501e-01	k: 637759	n:700000
KS ci ratio: 1.959993e+00	ci left: 8.838182e-07	ci right 1.252462e-05	k: 3	n:700000
IL32   700000 perm   303 sec   (2310 perm/sec)   p_kst 4.285714e-06   p_cons 9.110843e-01   p_joint 1.257143e-04

Joint ci ratio: 4.131778e-01	ci left: 1.006692e-04	ci right 1.542543e-04	k: 89	n:710000
Cons ci ratio: 1.453407e-03	ci left: 9.104130e-01	ci right 9.117386e-01	k: 646865	n:710000
KS ci ratio: 1.959993e+00	ci left: 8.713700e-07	ci right 1.234822e-05	k: 3	n:710000
IL32   710000 perm   310 sec   (2290 perm/sec)   p_kst 4.225352e-06   p_cons 9.110775e-01   p_joint 1.253521e-04

Joint ci ratio: 4.064585e-01	ci left: 1.030081e-04	ci right 1.567058e-04	k: 92	n:720000
Cons ci ratio: 1.443165e-03	ci left: 9.104305e-01	ci right 9.117467e-01	k: 655985	n:720000
KS ci ratio: 1.959993e+00	ci left: 8.592677e-07	ci right 1.217672e-05	k: 3	n:720000
IL32   720000 perm   317 sec   (2269 perm/sec)   p_kst 4.166667e-06   p_cons 9.110903e-01   p_joint 1.277778e-04

Joint ci ratio: 4.000567e-01	ci left: 1.052898e-04	ci right 1.590834e-04	k: 95	n:730000
Cons ci ratio: 1.433875e-03	ci left: 9.103637e-01	ci right 9.116714e-01	k: 665044	n:730000
KS ci ratio: 1.959993e+00	ci left: 8.474969e-07	ci right 1.200992e-05	k: 3	n:730000
IL32   730000 perm   325 sec   (2249 perm/sec)   p_kst 4.109589e-06   p_cons 9.110192e-01   p_joint 1.301370e-04

Joint ci ratio: 3.979893e-01	ci left: 1.050827e-04	ci right 1.584199e-04	k: 96	n:740000
Cons ci ratio: 1.425129e-03	ci left: 9.102568e-01	ci right 9.115562e-01	k: 674072	n:740000
KS ci ratio: 1.959993e+00	ci left: 8.360442e-07	ci right 1.184762e-05	k: 3	n:740000
IL32   740000 perm   332 sec   (2230 perm/sec)   p_kst 4.054054e-06   p_cons 9.109081e-01   p_joint 1.297297e-04

Joint ci ratio: 4.355317e-01	ci left: 8.458091e-05	ci right 1.327542e-04	k: 80	n:750000
Cons ci ratio: 1.415725e-03	ci left: 9.102463e-01	ci right 9.115372e-01	k: 683170	n:750000
KS ci ratio: 1.959993e+00	ci left: 8.248969e-07	ci right 1.168965e-05	k: 3	n:750000
IL32   750000 perm   339 sec   (2211 perm/sec)   p_kst 4.000000e-06   p_cons 9.108933e-01   p_joint 1.066667e-04

Joint ci ratio: 4.328679e-01	ci left: 8.463994e-05	ci right 1.324662e-04	k: 81	n:760000
Cons ci ratio: 1.406197e-03	ci left: 9.102718e-01	ci right 9.115540e-01	k: 692295	n:760000
KS ci ratio: 1.959994e+00	ci left: 8.140430e-07	ci right 1.153584e-05	k: 3	n:760000
IL32   760000 perm   347 sec   (2192 perm/sec)   p_kst 3.947368e-06   p_cons 9.109145e-01   p_joint 1.065789e-04

Joint ci ratio: 4.302524e-01	ci left: 8.469831e-05	ci right 1.321848e-04	k: 82	n:770000
Cons ci ratio: 1.397171e-03	ci left: 9.102602e-01	ci right 9.115341e-01	k: 701392	n:770000
KS ci ratio: 1.959994e+00	ci left: 8.034710e-07	ci right 1.138603e-05	k: 3	n:770000
IL32   770000 perm   354 sec   (2174 perm/sec)   p_kst 3.896104e-06   p_cons 9.108987e-01   p_joint 1.064935e-04

Joint ci ratio: 4.276838e-01	ci left: 8.475604e-05	ci right 1.319098e-04	k: 83	n:780000
Cons ci ratio: 1.387901e-03	ci left: 9.102978e-01	ci right 9.115633e-01	k: 710527	n:780000
KS ci ratio: 1.959994e+00	ci left: 7.931701e-07	ci right 1.124005e-05	k: 3	n:780000
IL32   780000 perm   362 sec   (2156 perm/sec)   p_kst 3.846154e-06   p_cons 9.109321e-01   p_joint 1.064103e-04

Joint ci ratio: 4.251606e-01	ci left: 8.481312e-05	ci right 1.316410e-04	k: 84	n:790000
Cons ci ratio: 1.379157e-03	ci left: 9.102938e-01	ci right 9.115513e-01	k: 719630	n:790000
KS ci ratio: 1.959994e+00	ci left: 7.831300e-07	ci right 1.109777e-05	k: 3	n:790000
IL32   790000 perm   370 sec   (2136 perm/sec)   p_kst 3.797468e-06   p_cons 9.109241e-01   p_joint 1.063291e-04

Joint ci ratio: 4.178502e-01	ci left: 8.710518e-05	ci right 1.341410e-04	k: 87	n:800000
Cons ci ratio: 1.370618e-03	ci left: 9.102849e-01	ci right 9.115346e-01	k: 728729	n:800000
KS ci ratio: 1.959994e+00	ci left: 7.733408e-07	ci right 1.095905e-05	k: 3	n:800000
IL32   800000 perm   378 sec   (2118 perm/sec)   p_kst 3.750000e-06   p_cons 9.109112e-01   p_joint 1.087500e-04

Joint ci ratio: 4.154961e-01	ci left: 8.713492e-05	ci right 1.338483e-04	k: 88	n:810000
Cons ci ratio: 1.362433e-03	ci left: 9.102527e-01	ci right 9.114949e-01	k: 737809	n:810000
KS ci ratio: 1.959994e+00	ci left: 7.637934e-07	ci right 1.082376e-05	k: 3	n:810000
IL32   810000 perm   386 sec   (2100 perm/sec)   p_kst 3.703704e-06   p_cons 9.108753e-01   p_joint 1.086420e-04

Joint ci ratio: 4.109046e-01	ci left: 8.825776e-05	ci right 1.349072e-04	k: 90	n:820000
Cons ci ratio: 1.354189e-03	ci left: 9.102458e-01	ci right 9.114805e-01	k: 746909	n:820000
KS ci ratio: 1.959994e+00	ci left: 7.544788e-07	ci right 1.069176e-05	k: 3	n:820000
IL32   820000 perm   394 sec   (2083 perm/sec)   p_kst 3.658537e-06   p_cons 9.108646e-01   p_joint 1.097561e-04

Joint ci ratio: 4.109049e-01	ci left: 8.719440e-05	ci right 1.332818e-04	k: 90	n:830000
Cons ci ratio: 1.346372e-03	ci left: 9.102053e-01	ci right 9.114328e-01	k: 755981	n:830000
KS ci ratio: 1.959994e+00	ci left: 7.453887e-07	ci right 1.056294e-05	k: 3	n:830000
IL32   830000 perm   402 sec   (2066 perm/sec)   p_kst 3.614458e-06   p_cons 9.108205e-01   p_joint 1.084337e-04

Joint ci ratio: 4.202461e-01	ci left: 8.189234e-05	ci right 1.264381e-04	k: 86	n:840000
Cons ci ratio: 1.338002e-03	ci left: 9.102493e-01	ci right 9.114692e-01	k: 765123	n:840000
KS ci ratio: 1.959994e+00	ci left: 7.365150e-07	ci right 1.043719e-05	k: 3	n:840000
IL32   840000 perm   410 sec   (2050 perm/sec)   p_kst 3.571429e-06   p_cons 9.108607e-01   p_joint 1.023810e-04

Joint ci ratio: 4.154972e-01	ci left: 8.303442e-05	ci right 1.275496e-04	k: 88	n:850000
Cons ci ratio: 1.329815e-03	ci left: 9.102888e-01	ci right 9.115013e-01	k: 774262	n:850000
KS ci ratio: 1.959994e+00	ci left: 7.278501e-07	ci right 1.031440e-05	k: 3	n:850000
IL32   850000 perm   418 sec   (2034 perm/sec)   p_kst 3.529412e-06   p_cons 9.108965e-01   p_joint 1.035294e-04

Joint ci ratio: 4.131824e-01	ci left: 8.311046e-05	ci right 1.273498e-04	k: 89	n:860000
Cons ci ratio: 1.322137e-03	ci left: 9.102831e-01	ci right 9.114886e-01	k: 783363	n:860000
KS ci ratio: 1.959994e+00	ci left: 7.193868e-07	ci right 1.019447e-05	k: 3	n:860000
IL32   860000 perm   426 sec   (2017 perm/sec)   p_kst 3.488372e-06   p_cons 9.108872e-01   p_joint 1.034884e-04

Joint ci ratio: 4.131827e-01	ci left: 8.215516e-05	ci right 1.258861e-04	k: 89	n:870000
Cons ci ratio: 1.314496e-03	ci left: 9.102890e-01	ci right 9.114875e-01	k: 792474	n:870000
KS ci ratio: 1.959994e+00	ci left: 7.111179e-07	ci right 1.007729e-05	k: 3	n:870000
IL32   870000 perm   435 sec   (2002 perm/sec)   p_kst 3.448276e-06   p_cons 9.108897e-01   p_joint 1.022989e-04

Joint ci ratio: 4.131829e-01	ci left: 8.122157e-05	ci right 1.244555e-04	k: 89	n:880000
Cons ci ratio: 1.306777e-03	ci left: 9.103211e-01	ci right 9.115126e-01	k: 801608	n:880000
KS ci ratio: 1.959994e+00	ci left: 7.030371e-07	ci right 9.962778e-06	k: 3	n:880000
IL32   880000 perm   443 sec   (1986 perm/sec)   p_kst 3.409091e-06   p_cons 9.109182e-01   p_joint 1.011364e-04

Joint ci ratio: 4.467059e-01	ci left: 6.728075e-05	ci right 1.068812e-04	k: 76	n:890000
Cons ci ratio: 1.299308e-03	ci left: 9.103378e-01	ci right 9.115225e-01	k: 810729	n:890000
KS ci ratio: 1.959994e+00	ci left: 6.951378e-07	ci right 9.850837e-06	k: 3	n:890000
IL32   890000 perm   452 sec   (1971 perm/sec)   p_kst 3.370787e-06   p_cons 9.109315e-01   p_joint 8.539326e-05

Joint ci ratio: 4.438331e-01	ci left: 6.751968e-05	ci right 1.069286e-04	k: 77	n:900000
Cons ci ratio: 1.292373e-03	ci left: 9.103029e-01	ci right 9.114812e-01	k: 819804	n:900000
KS ci ratio: 1.959995e+00	ci left: 6.874140e-07	ci right 9.741383e-06	k: 3	n:900000
IL32   900000 perm   460 sec   (1956 perm/sec)   p_kst 3.333333e-06   p_cons 9.108933e-01   p_joint 8.555556e-05

Joint ci ratio: 4.328718e-01	ci left: 7.068818e-05	ci right 1.106313e-04	k: 81	n:910000
Cons ci ratio: 1.285591e-03	ci left: 9.102632e-01	ci right 9.114353e-01	k: 828874	n:910000
KS ci ratio: 1.753072e+00	ci left: 1.197656e-06	ci right 1.125445e-05	k: 4	n:910000
IL32   910000 perm   469 sec   (1941 perm/sec)   p_kst 4.395604e-06   p_cons 9.108505e-01   p_joint 8.901099e-05

Joint ci ratio: 4.276873e-01	ci left: 7.185827e-05	ci right 1.118368e-04	k: 83	n:920000
Cons ci ratio: 1.278333e-03	ci left: 9.102986e-01	ci right 9.114641e-01	k: 838012	n:920000
KS ci ratio: 1.753072e+00	ci left: 1.184638e-06	ci right 1.113212e-05	k: 4	n:920000
IL32   920000 perm   477 sec   (1927 perm/sec)   p_kst 4.347826e-06   p_cons 9.108826e-01   p_joint 9.021739e-05

Joint ci ratio: 4.276875e-01	ci left: 7.108559e-05	ci right 1.106343e-04	k: 83	n:930000
Cons ci ratio: 1.271802e-03	ci left: 9.102556e-01	ci right 9.114150e-01	k: 847078	n:930000
KS ci ratio: 1.753072e+00	ci left: 1.171899e-06	ci right 1.101242e-05	k: 4	n:930000
IL32   930000 perm   486 sec   (1913 perm/sec)   p_kst 4.301075e-06   p_cons 9.108366e-01   p_joint 8.924731e-05

Joint ci ratio: 4.587832e-01	ci left: 5.993192e-05	ci right 9.645871e-05	k: 72	n:940000
Cons ci ratio: 1.264939e-03	ci left: 9.102689e-01	ci right 9.114221e-01	k: 856196	n:940000
KS ci ratio: 1.753072e+00	ci left: 1.159432e-06	ci right 1.089527e-05	k: 4	n:940000
IL32   940000 perm   495 sec   (1899 perm/sec)   p_kst 4.255319e-06   p_cons 9.108468e-01   p_joint 7.659574e-05

Joint ci ratio: 4.587834e-01	ci left: 5.930105e-05	ci right 9.544336e-05	k: 72	n:950000
Cons ci ratio: 1.258610e-03	ci left: 9.102272e-01	ci right 9.113745e-01	k: 865262	n:950000
KS ci ratio: 1.753072e+00	ci left: 1.147228e-06	ci right 1.078058e-05	k: 4	n:950000
IL32   950000 perm   504 sec   (1885 perm/sec)   p_kst 4.210526e-06   p_cons 9.108021e-01   p_joint 7.578947e-05

Joint ci ratio: 4.556729e-01	ci left: 5.960499e-05	ci right 9.561004e-05	k: 73	n:960000
Cons ci ratio: 1.251925e-03	ci left: 9.102448e-01	ci right 9.113861e-01	k: 874384	n:960000
KS ci ratio: 1.753072e+00	ci left: 1.135278e-06	ci right 1.066829e-05	k: 4	n:960000
IL32   960000 perm   513 sec   (1871 perm/sec)   p_kst 4.166667e-06   p_cons 9.108167e-01   p_joint 7.604167e-05

Joint ci ratio: 4.556731e-01	ci left: 5.899050e-05	ci right 9.462438e-05	k: 73	n:970000
Cons ci ratio: 1.245812e-03	ci left: 9.102010e-01	ci right 9.113367e-01	k: 883447	n:970000
KS ci ratio: 1.753072e+00	ci left: 1.123574e-06	ci right 1.055830e-05	k: 4	n:970000
IL32   970000 perm   522 sec   (1857 perm/sec)   p_kst 4.123711e-06   p_cons 9.107701e-01   p_joint 7.525773e-05

Joint ci ratio: 4.438347e-01	ci left: 6.200782e-05	ci right 9.819984e-05	k: 77	n:980000
Cons ci ratio: 1.239367e-03	ci left: 9.102135e-01	ci right 9.113433e-01	k: 892564	n:980000
KS ci ratio: 1.600328e+00	ci left: 1.656621e-06	ci right 1.190642e-05	k: 5	n:980000
IL32   980000 perm   532 sec   (1844 perm/sec)   p_kst 5.102041e-06   p_cons 9.107796e-01   p_joint 7.857143e-05

Joint ci ratio: 4.438349e-01	ci left: 6.138148e-05	ci right 9.720793e-05	k: 77	n:990000
Cons ci ratio: 1.233136e-03	ci left: 9.102105e-01	ci right 9.113346e-01	k: 901666	n:990000
KS ci ratio: 1.600328e+00	ci left: 1.639887e-06	ci right 1.178615e-05	k: 5	n:990000
IL32   990000 perm   541 sec   (1831 perm/sec)   p_kst 5.050505e-06   p_cons 9.107737e-01   p_joint 7.777778e-05

Joint ci ratio: 4.410168e-01	ci left: 6.165624e-05	ci right 9.734659e-05	k: 78	n:1000000
Cons ci ratio: 1.227150e-03	ci left: 9.101875e-01	ci right 9.113061e-01	k: 910748	n:1000000
KS ci ratio: 1.600328e+00	ci left: 1.623488e-06	ci right 1.166829e-05	k: 5	n:1000000
IL32   1000000 perm   550 sec   (1818 perm/sec)   p_kst 5.000000e-06   p_cons 9.107480e-01   p_joint 7.800000e-05

Joint ci ratio: 4.652018e-01	ci left: 5.402854e-05	ci right 8.756434e-05	k: 70	n:1010000
Cons ci ratio: 1.220862e-03	ci left: 9.102166e-01	ci right 9.113295e-01	k: 919882	n:1010000
KS ci ratio: 1.600328e+00	ci left: 1.607414e-06	ci right 1.155277e-05	k: 5	n:1010000
IL32   1010000 perm   559 sec   (1805 perm/sec)   p_kst 4.950495e-06   p_cons 9.107743e-01   p_joint 6.930693e-05

Joint ci ratio: 4.652020e-01	ci left: 5.349884e-05	ci right 8.670587e-05	k: 70	n:1020000
Cons ci ratio: 1.214758e-03	ci left: 9.102334e-01	ci right 9.113407e-01	k: 929004	n:1020000
KS ci ratio: 1.600328e+00	ci left: 1.591655e-06	ci right 1.143950e-05	k: 5	n:1020000
IL32   1020000 perm   569 sec   (1794 perm/sec)   p_kst 4.901961e-06   p_cons 9.107882e-01   p_joint 6.862745e-05

Joint ci ratio: 4.587848e-01	ci left: 5.469511e-05	ci right 8.803035e-05	k: 72	n:1030000
Cons ci ratio: 1.208709e-03	ci left: 9.102547e-01	ci right 9.113566e-01	k: 938131	n:1030000
KS ci ratio: 1.600328e+00	ci left: 1.576202e-06	ci right 1.132844e-05	k: 5	n:1030000
IL32   1030000 perm   578 sec   (1782 perm/sec)   p_kst 4.854369e-06   p_cons 9.108068e-01   p_joint 6.990291e-05

Joint ci ratio: 4.556743e-01	ci left: 5.501996e-05	ci right 8.825549e-05	k: 73	n:1040000
Cons ci ratio: 1.203098e-03	ci left: 9.102284e-01	ci right 9.113251e-01	k: 947209	n:1040000
KS ci ratio: 1.600328e+00	ci left: 1.561046e-06	ci right 1.121951e-05	k: 5	n:1040000
IL32   1040000 perm   587 sec   (1771 perm/sec)   p_kst 4.807692e-06   p_cons 9.107779e-01   p_joint 7.019231e-05

Joint ci ratio: 4.652025e-01	ci left: 5.197029e-05	ci right 8.422858e-05	k: 70	n:1050000
Cons ci ratio: 1.197101e-03	ci left: 9.102656e-01	ci right 9.113569e-01	k: 956353	n:1050000
KS ci ratio: 1.600328e+00	ci left: 1.546179e-06	ci right 1.111266e-05	k: 5	n:1050000
IL32   1050000 perm   597 sec   (1759 perm/sec)   p_kst 4.761905e-06   p_cons 9.108124e-01   p_joint 6.666667e-05

Joint ci ratio: 4.652026e-01	ci left: 5.148001e-05	ci right 8.343398e-05	k: 70	n:1060000
Cons ci ratio: 1.191448e-03	ci left: 9.102671e-01	ci right 9.113533e-01	k: 965460	n:1060000
KS ci ratio: 1.600328e+00	ci left: 1.531593e-06	ci right 1.100783e-05	k: 5	n:1060000
IL32   1060000 perm   606 sec   (1748 perm/sec)   p_kst 4.716981e-06   p_cons 9.108113e-01   p_joint 6.603774e-05

Joint ci ratio: 4.652028e-01	ci left: 5.099888e-05	ci right 8.265423e-05	k: 70	n:1070000
Cons ci ratio: 1.186060e-03	ci left: 9.102434e-01	ci right 9.113245e-01	k: 974540	n:1070000
KS ci ratio: 1.600328e+00	ci left: 1.517279e-06	ci right 1.090495e-05	k: 5	n:1070000
IL32   1070000 perm   616 sec   (1737 perm/sec)   p_kst 4.672897e-06   p_cons 9.107850e-01   p_joint 6.542056e-05

Joint ci ratio: 4.652029e-01	ci left: 5.052667e-05	ci right 8.188892e-05	k: 70	n:1080000
Cons ci ratio: 1.180191e-03	ci left: 9.102962e-01	ci right 9.113720e-01	k: 983702	n:1080000
KS ci ratio: 1.600328e+00	ci left: 1.503230e-06	ci right 1.080398e-05	k: 5	n:1080000
IL32   1080000 perm   626 sec   (1726 perm/sec)   p_kst 4.629630e-06   p_cons 9.108352e-01   p_joint 6.481481e-05

Joint ci ratio: 4.587857e-01	ci left: 5.168435e-05	ci right 8.318469e-05	k: 72	n:1090000
Cons ci ratio: 1.174681e-03	ci left: 9.103103e-01	ci right 9.113811e-01	k: 992823	n:1090000
KS ci ratio: 1.600328e+00	ci left: 1.489439e-06	ci right 1.070486e-05	k: 5	n:1090000
IL32   1090000 perm   635 sec   (1716 perm/sec)   p_kst 4.587156e-06   p_cons 9.108468e-01   p_joint 6.605505e-05

Joint ci ratio: 4.587859e-01	ci left: 5.121449e-05	ci right 8.242847e-05	k: 72	n:1100000
Cons ci ratio: 1.169411e-03	ci left: 9.103014e-01	ci right 9.113674e-01	k: 1001919	n:1100000
KS ci ratio: 1.600328e+00	ci left: 1.475898e-06	ci right 1.060754e-05	k: 5	n:1100000
IL32   1100000 perm   645 sec   (1705 perm/sec)   p_kst 4.545455e-06   p_cons 9.108355e-01   p_joint 6.545455e-05

Joint ci ratio: 4.556753e-01	ci left: 5.155021e-05	ci right 8.268988e-05	k: 73	n:1110000
Cons ci ratio: 1.164050e-03	ci left: 9.103152e-01	ci right 9.113763e-01	k: 1011040	n:1110000
KS ci ratio: 1.600328e+00	ci left: 1.462602e-06	ci right 1.051198e-05	k: 5	n:1110000
IL32   1110000 perm   655 sec   (1695 perm/sec)   p_kst 4.504505e-06   p_cons 9.108468e-01   p_joint 6.576577e-05

Joint ci ratio: 4.556755e-01	ci left: 5.108993e-05	ci right 8.195158e-05	k: 73	n:1120000
Cons ci ratio: 1.158787e-03	ci left: 9.103252e-01	ci right 9.113816e-01	k: 1020157	n:1120000
KS ci ratio: 1.600328e+00	ci left: 1.449543e-06	ci right 1.041812e-05	k: 5	n:1120000
IL32   1120000 perm   665 sec   (1684 perm/sec)   p_kst 4.464286e-06   p_cons 9.108545e-01   p_joint 6.517857e-05

Joint ci ratio: 4.556756e-01	ci left: 5.063781e-05	ci right 8.122635e-05	k: 73	n:1130000
Cons ci ratio: 1.153734e-03	ci left: 9.103156e-01	ci right 9.113673e-01	k: 1029252	n:1130000
KS ci ratio: 1.600328e+00	ci left: 1.436715e-06	ci right 1.032593e-05	k: 5	n:1130000
IL32   1130000 perm   675 sec   (1674 perm/sec)   p_kst 4.424779e-06   p_cons 9.108425e-01   p_joint 6.460177e-05

Joint ci ratio: 4.556758e-01	ci left: 5.019361e-05	ci right 8.051385e-05	k: 73	n:1140000
Cons ci ratio: 1.148628e-03	ci left: 9.103228e-01	ci right 9.113699e-01	k: 1038366	n:1140000
KS ci ratio: 1.600328e+00	ci left: 1.424112e-06	ci right 1.023535e-05	k: 5	n:1140000
IL32   1140000 perm   685 sec   (1664 perm/sec)   p_kst 4.385965e-06   p_cons 9.108474e-01   p_joint 6.403509e-05

Joint ci ratio: 4.556759e-01	ci left: 4.975714e-05	ci right 7.981373e-05	k: 73	n:1150000
Cons ci ratio: 1.143534e-03	ci left: 9.103377e-01	ci right 9.113802e-01	k: 1047489	n:1150000
KS ci ratio: 1.600328e+00	ci left: 1.411729e-06	ci right 1.014635e-05	k: 5	n:1150000
IL32   1150000 perm   695 sec   (1654 perm/sec)   p_kst 4.347826e-06   p_cons 9.108600e-01   p_joint 6.347826e-05

Joint ci ratio: 4.526278e-01	ci left: 5.009163e-05	ci right 8.008575e-05	k: 74	n:1160000
Cons ci ratio: 1.138616e-03	ci left: 9.103369e-01	ci right 9.113748e-01	k: 1056594	n:1160000
KS ci ratio: 1.600328e+00	ci left: 1.399559e-06	ci right 1.005888e-05	k: 5	n:1160000
IL32   1160000 perm   706 sec   (1643 perm/sec)   p_kst 4.310345e-06   p_cons 9.108569e-01   p_joint 6.379310e-05

Joint ci ratio: 4.526279e-01	ci left: 4.966349e-05	ci right 7.940126e-05	k: 74	n:1170000
Cons ci ratio: 1.133361e-03	ci left: 9.103935e-01	ci right 9.114267e-01	k: 1065766	n:1170000
KS ci ratio: 1.600329e+00	ci left: 1.387597e-06	ci right 9.972905e-06	k: 5	n:1170000
IL32   1170000 perm   716 sec   (1633 perm/sec)   p_kst 4.273504e-06   p_cons 9.109111e-01   p_joint 6.324786e-05

Joint ci ratio: 4.526280e-01	ci left: 4.924261e-05	ci right 7.872837e-05	k: 74	n:1180000
Cons ci ratio: 1.128301e-03	ci left: 9.104313e-01	ci right 9.114599e-01	k: 1074917	n:1180000
KS ci ratio: 1.600329e+00	ci left: 1.375837e-06	ci right 9.888389e-06	k: 5	n:1180000
IL32   1180000 perm   727 sec   (1623 perm/sec)   p_kst 4.237288e-06   p_cons 9.109466e-01   p_joint 6.271186e-05

Joint ci ratio: 4.526282e-01	ci left: 4.882881e-05	ci right 7.806679e-05	k: 74	n:1190000
Cons ci ratio: 1.123577e-03	ci left: 9.104297e-01	ci right 9.114540e-01	k: 1084022	n:1190000
KS ci ratio: 1.600329e+00	ci left: 1.364276e-06	ci right 9.805294e-06	k: 5	n:1190000
IL32   1190000 perm   738 sec   (1613 perm/sec)   p_kst 4.201681e-06   p_cons 9.109429e-01   p_joint 6.218487e-05

Joint ci ratio: 4.526283e-01	ci left: 4.842190e-05	ci right 7.741624e-05	k: 74	n:1200000
Cons ci ratio: 1.118934e-03	ci left: 9.104248e-01	ci right 9.114449e-01	k: 1093123	n:1200000
KS ci ratio: 1.600329e+00	ci left: 1.352907e-06	ci right 9.723583e-06	k: 5	n:1200000
IL32   1200000 perm   748 sec   (1603 perm/sec)   p_kst 4.166667e-06   p_cons 9.109358e-01   p_joint 6.166667e-05

Joint ci ratio: 4.526284e-01	ci left: 4.802171e-05	ci right 7.677644e-05	k: 74	n:1210000
Cons ci ratio: 1.114155e-03	ci left: 9.104482e-01	ci right 9.114639e-01	k: 1102258	n:1210000
KS ci ratio: 1.600329e+00	ci left: 1.341726e-06	ci right 9.643223e-06	k: 5	n:1210000
IL32   1210000 perm   759 sec   (1594 perm/sec)   p_kst 4.132231e-06   p_cons 9.109570e-01   p_joint 6.115702e-05

Joint ci ratio: 4.467112e-01	ci left: 4.908174e-05	ci right 7.797097e-05	k: 76	n:1220000
Cons ci ratio: 1.109476e-03	ci left: 9.104654e-01	ci right 9.114769e-01	k: 1111386	n:1220000
KS ci ratio: 1.600329e+00	ci left: 1.330728e-06	ci right 9.564180e-06	k: 5	n:1220000
IL32   1220000 perm   770 sec   (1585 perm/sec)   p_kst 4.098361e-06   p_cons 9.109721e-01   p_joint 6.229508e-05

Joint ci ratio: 4.467113e-01	ci left: 4.868270e-05	ci right 7.733707e-05	k: 76	n:1230000
Cons ci ratio: 1.104905e-03	ci left: 9.104750e-01	ci right 9.114824e-01	k: 1120505	n:1230000
KS ci ratio: 1.600329e+00	ci left: 1.319909e-06	ci right 9.486423e-06	k: 5	n:1230000
IL32   1230000 perm   780 sec   (1576 perm/sec)   p_kst 4.065041e-06   p_cons 9.109797e-01   p_joint 6.178862e-05

Joint ci ratio: 4.467114e-01	ci left: 4.829010e-05	ci right 7.671339e-05	k: 76	n:1240000
Cons ci ratio: 1.100555e-03	ci left: 9.104603e-01	ci right 9.114636e-01	k: 1129594	n:1240000
KS ci ratio: 1.600329e+00	ci left: 1.309264e-06	ci right 9.409920e-06	k: 5	n:1240000
IL32   1240000 perm   791 sec   (1567 perm/sec)   p_kst 4.032258e-06   p_cons 9.109629e-01   p_joint 6.129032e-05

Joint ci ratio: 4.467115e-01	ci left: 4.790377e-05	ci right 7.609968e-05	k: 76	n:1250000
Cons ci ratio: 1.096277e-03	ci left: 9.104425e-01	ci right 9.114420e-01	k: 1138679	n:1250000
KS ci ratio: 1.600329e+00	ci left: 1.298790e-06	ci right 9.334641e-06	k: 5	n:1250000
IL32   1250000 perm   802 sec   (1559 perm/sec)   p_kst 4.000000e-06   p_cons 9.109432e-01   p_joint 6.080000e-05

Joint ci ratio: 4.467116e-01	ci left: 4.752358e-05	ci right 7.549572e-05	k: 76	n:1260000
Cons ci ratio: 1.091706e-03	ci left: 9.104760e-01	ci right 9.114713e-01	k: 1147828	n:1260000
KS ci ratio: 1.600329e+00	ci left: 1.288482e-06	ci right 9.260557e-06	k: 5	n:1260000
IL32   1260000 perm   813 sec   (1550 perm/sec)   p_kst 3.968254e-06   p_cons 9.109746e-01   p_joint 6.031746e-05

Joint ci ratio: 4.438388e-01	ci left: 4.784847e-05	ci right 7.577642e-05	k: 77	n:1270000
Cons ci ratio: 1.087647e-03	ci left: 9.104411e-01	ci right 9.114326e-01	k: 1156891	n:1270000
KS ci ratio: 1.600329e+00	ci left: 1.278337e-06	ci right 9.187639e-06	k: 5	n:1270000
IL32   1270000 perm   824 sec   (1541 perm/sec)   p_kst 3.937008e-06   p_cons 9.109378e-01   p_joint 6.062992e-05

Joint ci ratio: 4.438389e-01	ci left: 4.747465e-05	ci right 7.518443e-05	k: 77	n:1280000
Cons ci ratio: 1.083245e-03	ci left: 9.104647e-01	ci right 9.114522e-01	k: 1166028	n:1280000
KS ci ratio: 1.600329e+00	ci left: 1.268350e-06	ci right 9.115861e-06	k: 5	n:1280000
IL32   1280000 perm   835 sec   (1532 perm/sec)   p_kst 3.906250e-06   p_cons 9.109594e-01   p_joint 6.015625e-05

Joint ci ratio: 4.382556e-01	ci left: 4.848482e-05	ci right 7.632312e-05	k: 79	n:1290000
Cons ci ratio: 1.078588e-03	ci left: 9.105345e-01	ci right 9.115179e-01	k: 1175225	n:1290000
KS ci ratio: 1.481616e+00	ci left: 1.706897e-06	ci right 1.012360e-05	k: 6	n:1290000
IL32   1290000 perm   847 sec   (1523 perm/sec)   p_kst 4.651163e-06   p_cons 9.110271e-01   p_joint 6.124031e-05

Joint ci ratio: 4.382557e-01	ci left: 4.811186e-05	ci right 7.573603e-05	k: 79	n:1300000
Cons ci ratio: 1.074463e-03	ci left: 9.105316e-01	ci right 9.115112e-01	k: 1184329	n:1300000
KS ci ratio: 1.481616e+00	ci left: 1.693767e-06	ci right 1.004572e-05	k: 6	n:1300000
IL32   1300000 perm   858 sec   (1515 perm/sec)   p_kst 4.615385e-06   p_cons 9.110223e-01   p_joint 6.076923e-05

Joint ci ratio: 4.382558e-01	ci left: 4.774459e-05	ci right 7.515789e-05	k: 79	n:1310000
Cons ci ratio: 1.070220e-03	ci left: 9.105540e-01	ci right 9.115297e-01	k: 1193466	n:1310000
KS ci ratio: 1.481616e+00	ci left: 1.680837e-06	ci right 9.969037e-06	k: 6	n:1310000
IL32   1310000 perm   870 sec   (1506 perm/sec)   p_kst 4.580153e-06   p_cons 9.110427e-01   p_joint 6.030534e-05

Joint ci ratio: 4.382559e-01	ci left: 4.738289e-05	ci right 7.458852e-05	k: 79	n:1320000
Cons ci ratio: 1.066150e-03	ci left: 9.105570e-01	ci right 9.115291e-01	k: 1202578	n:1320000
KS ci ratio: 1.481616e+00	ci left: 1.668103e-06	ci right 9.893514e-06	k: 6	n:1320000
IL32   1320000 perm   881 sec   (1498 perm/sec)   p_kst 4.545455e-06   p_cons 9.110439e-01   p_joint 5.984848e-05

Joint ci ratio: 4.382560e-01	ci left: 4.702662e-05	ci right 7.402771e-05	k: 79	n:1330000
Cons ci ratio: 1.062289e-03	ci left: 9.105352e-01	ci right 9.115037e-01	k: 1211657	n:1330000
KS ci ratio: 1.481616e+00	ci left: 1.655561e-06	ci right 9.819127e-06	k: 6	n:1330000
IL32   1330000 perm   893 sec   (1489 perm/sec)   p_kst 4.511278e-06   p_cons 9.110203e-01   p_joint 5.939850e-05

Joint ci ratio: 4.328782e-01	ci left: 4.800453e-05	ci right 7.513050e-05	k: 81	n:1340000
Cons ci ratio: 1.058178e-03	ci left: 9.105585e-01	ci right 9.115233e-01	k: 1220796	n:1340000
KS ci ratio: 1.481616e+00	ci left: 1.643206e-06	ci right 9.745850e-06	k: 6	n:1340000
IL32   1340000 perm   905 sec   (1480 perm/sec)   p_kst 4.477612e-06   p_cons 9.110418e-01   p_joint 6.044776e-05

Joint ci ratio: 4.328783e-01	ci left: 4.764894e-05	ci right 7.457398e-05	k: 81	n:1350000
Cons ci ratio: 1.054172e-03	ci left: 9.105726e-01	ci right 9.115338e-01	k: 1229923	n:1350000
KS ci ratio: 1.481616e+00	ci left: 1.631034e-06	ci right 9.673659e-06	k: 6	n:1350000
IL32   1350000 perm   917 sec   (1473 perm/sec)   p_kst 4.444444e-06   p_cons 9.110541e-01   p_joint 6.000000e-05

Joint ci ratio: 4.328784e-01	ci left: 4.729858e-05	ci right 7.402564e-05	k: 81	n:1360000
Cons ci ratio: 1.050468e-03	ci left: 9.105467e-01	ci right 9.115045e-01	k: 1238996	n:1360000
KS ci ratio: 1.481616e+00	ci left: 1.619042e-06	ci right 9.602530e-06	k: 6	n:1360000
IL32   1360000 perm   928 sec   (1465 perm/sec)   p_kst 4.411765e-06   p_cons 9.110265e-01   p_joint 5.955882e-05

Joint ci ratio: 4.251704e-01	ci left: 4.890663e-05	ci right 7.591019e-05	k: 84	n:1370000
Cons ci ratio: 1.046835e-03	ci left: 9.105161e-01	ci right 9.114705e-01	k: 1248062	n:1370000
KS ci ratio: 1.481616e+00	ci left: 1.607224e-06	ci right 9.532438e-06	k: 6	n:1370000
IL32   1370000 perm   941 sec   (1456 perm/sec)   p_kst 4.379562e-06   p_cons 9.109942e-01   p_joint 6.131387e-05

Joint ci ratio: 4.251704e-01	ci left: 4.855223e-05	ci right 7.536012e-05	k: 84	n:1380000
Cons ci ratio: 1.042947e-03	ci left: 9.105317e-01	ci right 9.114825e-01	k: 1257191	n:1380000
KS ci ratio: 1.481616e+00	ci left: 1.595577e-06	ci right 9.463363e-06	k: 6	n:1380000
IL32   1380000 perm   953 sec   (1448 perm/sec)   p_kst 4.347826e-06   p_cons 9.110080e-01   p_joint 6.086957e-05

Joint ci ratio: 4.226912e-01	ci left: 4.884559e-05	ci right 7.561371e-05	k: 85	n:1390000
Cons ci ratio: 1.039396e-03	ci left: 9.105009e-01	ci right 9.114485e-01	k: 1266256	n:1390000
KS ci ratio: 1.385925e+00	ci left: 2.024724e-06	ci right 1.037600e-05	k: 7	n:1390000
IL32   1390000 perm   965 sec   (1440 perm/sec)   p_kst 5.035971e-06   p_cons 9.109755e-01   p_joint 6.115108e-05

Joint ci ratio: 4.226913e-01	ci left: 4.849669e-05	ci right 7.507362e-05	k: 85	n:1400000
Cons ci ratio: 1.035621e-03	ci left: 9.105114e-01	ci right 9.114555e-01	k: 1275378	n:1400000
KS ci ratio: 1.385925e+00	ci left: 2.010262e-06	ci right 1.030188e-05	k: 7	n:1400000
IL32   1400000 perm   978 sec   (1432 perm/sec)   p_kst 5.000000e-06   p_cons 9.109843e-01   p_joint 6.071429e-05

Joint ci ratio: 4.202550e-01	ci left: 4.878673e-05	ci right 7.532521e-05	k: 86	n:1410000
Cons ci ratio: 1.031991e-03	ci left: 9.105053e-01	ci right 9.114462e-01	k: 1284477	n:1410000
KS ci ratio: 1.385925e+00	ci left: 1.996004e-06	ci right 1.022882e-05	k: 7	n:1410000
IL32   1410000 perm   990 sec   (1424 perm/sec)   p_kst 4.964539e-06   p_cons 9.109766e-01   p_joint 6.099291e-05

Joint ci ratio: 4.202551e-01	ci left: 4.844316e-05	ci right 7.479475e-05	k: 86	n:1420000
Cons ci ratio: 1.028279e-03	ci left: 9.105185e-01	ci right 9.114559e-01	k: 1293603	n:1420000
KS ci ratio: 1.385925e+00	ci left: 1.981948e-06	ci right 1.015679e-05	k: 7	n:1420000
IL32   1420000 perm   1002 sec   (1417 perm/sec)   p_kst 4.929577e-06   p_cons 9.109880e-01   p_joint 6.056338e-05

Joint ci ratio: 4.178604e-01	ci left: 4.872995e-05	ci right 7.504435e-05	k: 87	n:1430000
Cons ci ratio: 1.024628e-03	ci left: 9.105279e-01	ci right 9.114620e-01	k: 1302724	n:1430000
KS ci ratio: 1.385925e+00	ci left: 1.968088e-06	ci right 1.008576e-05	k: 7	n:1430000
IL32   1430000 perm   1015 sec   (1409 perm/sec)   p_kst 4.895105e-06   p_cons 9.109958e-01   p_joint 6.083916e-05

Joint ci ratio: 4.178605e-01	ci left: 4.839155e-05	ci right 7.452321e-05	k: 87	n:1440000
Cons ci ratio: 1.020981e-03	ci left: 9.105428e-01	ci right 9.114736e-01	k: 1311853	n:1440000
KS ci ratio: 1.385925e+00	ci left: 1.954421e-06	ci right 1.001572e-05	k: 7	n:1440000
IL32   1440000 perm   1027 sec   (1402 perm/sec)   p_kst 4.861111e-06   p_cons 9.110090e-01   p_joint 6.041667e-05

Joint ci ratio: 4.155063e-01	ci left: 4.867515e-05	ci right 7.477083e-05	k: 88	n:1450000
Cons ci ratio: 1.017550e-03	ci left: 9.105291e-01	ci right 9.114568e-01	k: 1320941	n:1450000
KS ci ratio: 1.385925e+00	ci left: 1.940942e-06	ci right 9.946647e-06	k: 7	n:1450000
IL32   1450000 perm   1040 sec   (1394 perm/sec)   p_kst 4.827586e-06   p_cons 9.109938e-01   p_joint 6.068966e-05

Joint ci ratio: 4.155064e-01	ci left: 4.834176e-05	ci right 7.425870e-05	k: 88	n:1460000
Cons ci ratio: 1.013956e-03	ci left: 9.105473e-01	ci right 9.114717e-01	k: 1330075	n:1460000
KS ci ratio: 1.385925e+00	ci left: 1.927648e-06	ci right 9.878520e-06	k: 7	n:1460000
IL32   1460000 perm   1053 sec   (1386 perm/sec)   p_kst 4.794521e-06   p_cons 9.110103e-01   p_joint 6.027397e-05

Joint ci ratio: 4.155064e-01	ci left: 4.801290e-05	ci right 7.375354e-05	k: 88	n:1470000
Cons ci ratio: 1.010468e-03	ci left: 9.105542e-01	ci right 9.114754e-01	k: 1339193	n:1470000
KS ci ratio: 1.385925e+00	ci left: 1.914535e-06	ci right 9.811319e-06	k: 7	n:1470000
IL32   1470000 perm   1066 sec   (1379 perm/sec)   p_kst 4.761905e-06   p_cons 9.110156e-01   p_joint 5.986395e-05

Joint ci ratio: 4.155065e-01	ci left: 4.768849e-05	ci right 7.325521e-05	k: 88	n:1480000
Cons ci ratio: 1.007128e-03	ci left: 9.105428e-01	ci right 9.114610e-01	k: 1348284	n:1480000
KS ci ratio: 1.385925e+00	ci left: 1.901599e-06	ci right 9.745026e-06	k: 7	n:1480000
IL32   1480000 perm   1079 sec   (1371 perm/sec)   p_kst 4.729730e-06   p_cons 9.110027e-01   p_joint 5.945946e-05

Joint ci ratio: 4.155066e-01	ci left: 4.736843e-05	ci right 7.276357e-05	k: 88	n:1490000
Cons ci ratio: 1.003772e-03	ci left: 9.105396e-01	ci right 9.114547e-01	k: 1357387	n:1490000
KS ci ratio: 1.385925e+00	ci left: 1.888836e-06	ci right 9.679624e-06	k: 7	n:1490000
IL32   1490000 perm   1092 sec   (1364 perm/sec)   p_kst 4.697987e-06   p_cons 9.109980e-01   p_joint 5.906040e-05

Joint ci ratio: 4.155067e-01	ci left: 4.705264e-05	ci right 7.227848e-05	k: 88	n:1500000
Cons ci ratio: 1.000511e-03	ci left: 9.105265e-01	ci right 9.114386e-01	k: 1366475	n:1500000
KS ci ratio: 1.385925e+00	ci left: 1.876244e-06	ci right 9.615093e-06	k: 7	n:1500000
IL32   1500000 perm   1105 sec   (1357 perm/sec)   p_kst 4.666667e-06   p_cons 9.109833e-01   p_joint 5.866667e-05

Joint ci ratio: 4.155068e-01	ci left: 4.674103e-05	ci right 7.179982e-05	k: 88	n:1510000
Cons ci ratio: 9.971675e-04	ci left: 9.105321e-01	ci right 9.114412e-01	k: 1375591	n:1510000
KS ci ratio: 1.385925e+00	ci left: 1.863819e-06	ci right 9.551417e-06	k: 7	n:1510000
IL32   1510000 perm   1119 sec   (1350 perm/sec)   p_kst 4.635762e-06   p_cons 9.109874e-01   p_joint 5.827815e-05

Joint ci ratio: 4.131919e-01	ci left: 4.702283e-05	ci right 7.205357e-05	k: 89	n:1520000
Cons ci ratio: 9.938452e-04	ci left: 9.105396e-01	ci right 9.114457e-01	k: 1384710	n:1520000
KS ci ratio: 1.385925e+00	ci left: 1.851557e-06	ci right 9.488579e-06	k: 7	n:1520000
IL32   1520000 perm   1132 sec   (1343 perm/sec)   p_kst 4.605263e-06   p_cons 9.109934e-01   p_joint 5.855263e-05

Joint ci ratio: 4.131920e-01	ci left: 4.671549e-05	ci right 7.158263e-05	k: 89	n:1530000
Cons ci ratio: 9.907913e-04	ci left: 9.105084e-01	ci right 9.114116e-01	k: 1393770	n:1530000
KS ci ratio: 1.385925e+00	ci left: 1.839455e-06	ci right 9.426562e-06	k: 7	n:1530000
IL32   1530000 perm   1145 sec   (1336 perm/sec)   p_kst 4.575163e-06   p_cons 9.109608e-01   p_joint 5.816993e-05

Joint ci ratio: 4.086759e-01	ci left: 4.757657e-05	ci right 7.255005e-05	k: 91	n:1540000
Cons ci ratio: 9.875321e-04	ci left: 9.105160e-01	ci right 9.114162e-01	k: 1402889	n:1540000
KS ci ratio: 1.385925e+00	ci left: 1.827510e-06	ci right 9.365351e-06	k: 7	n:1540000
IL32   1540000 perm   1159 sec   (1329 perm/sec)   p_kst 4.545455e-06   p_cons 9.109669e-01   p_joint 5.909091e-05

Joint ci ratio: 4.043047e-01	ci left: 4.842801e-05	ci right 7.350356e-05	k: 93	n:1550000
Cons ci ratio: 9.843283e-04	ci left: 9.105196e-01	ci right 9.114169e-01	k: 1412002	n:1550000
KS ci ratio: 1.385925e+00	ci left: 1.815720e-06	ci right 9.304930e-06	k: 7	n:1550000
IL32   1550000 perm   1172 sec   (1322 perm/sec)   p_kst 4.516129e-06   p_cons 9.109690e-01   p_joint 6.000000e-05

Joint ci ratio: 4.000709e-01	ci left: 4.926993e-05	ci right 7.444345e-05	k: 95	n:1560000
Cons ci ratio: 9.812718e-04	ci left: 9.105039e-01	ci right 9.113984e-01	k: 1421085	n:1560000
KS ci ratio: 1.385925e+00	ci left: 1.804081e-06	ci right 9.245283e-06	k: 7	n:1560000
IL32   1560000 perm   1186 sec   (1316 perm/sec)   p_kst 4.487179e-06   p_cons 9.109519e-01   p_joint 6.089744e-05

Joint ci ratio: 3.939623e-01	ci left: 5.067616e-05	ci right 7.606993e-05	k: 98	n:1570000
Cons ci ratio: 9.779248e-04	ci left: 9.105414e-01	ci right 9.114329e-01	k: 1430251	n:1570000
KS ci ratio: 1.385925e+00	ci left: 1.792590e-06	ci right 9.186396e-06	k: 7	n:1570000
IL32   1570000 perm   1199 sec   (1309 perm/sec)   p_kst 4.458599e-06   p_cons 9.109879e-01   p_joint 6.242038e-05

Joint ci ratio: 3.919875e-01	ci left: 5.092580e-05	ci right 7.628362e-05	k: 99	n:1580000
Cons ci ratio: 9.748932e-04	ci left: 9.105315e-01	ci right 9.114202e-01	k: 1439343	n:1580000
KS ci ratio: 1.385925e+00	ci left: 1.781244e-06	ci right 9.128254e-06	k: 7	n:1580000
IL32   1580000 perm   1213 sec   (1302 perm/sec)   p_kst 4.430380e-06   p_cons 9.109766e-01   p_joint 6.265823e-05

Joint ci ratio: 3.900421e-01	ci left: 5.117261e-05	ci right 7.649432e-05	k: 100	n:1590000
Cons ci ratio: 9.719536e-04	ci left: 9.105110e-01	ci right 9.113970e-01	k: 1448418	n:1590000
KS ci ratio: 1.385925e+00	ci left: 1.770041e-06	ci right 9.070844e-06	k: 7	n:1590000
IL32   1590000 perm   1227 sec   (1296 perm/sec)   p_kst 4.402516e-06   p_cons 9.109547e-01   p_joint 6.289308e-05

Joint ci ratio: 3.900421e-01	ci left: 5.085277e-05	ci right 7.601623e-05	k: 100	n:1600000
Cons ci ratio: 9.687829e-04	ci left: 9.105339e-01	ci right 9.114171e-01	k: 1457562	n:1600000
KS ci ratio: 1.385925e+00	ci left: 1.758979e-06	ci right 9.014151e-06	k: 7	n:1600000
IL32   1600000 perm   1241 sec   (1290 perm/sec)   p_kst 4.375000e-06   p_cons 9.109763e-01   p_joint 6.250000e-05

Joint ci ratio: 3.881254e-01	ci left: 5.109727e-05	ci right 7.622567e-05	k: 101	n:1610000
Cons ci ratio: 9.657021e-04	ci left: 9.105467e-01	ci right 9.114270e-01	k: 1466690	n:1610000
KS ci ratio: 1.385925e+00	ci left: 1.748053e-06	ci right 8.958163e-06	k: 7	n:1610000
IL32   1610000 perm   1255 sec   (1283 perm/sec)   p_kst 4.347826e-06   p_cons 9.109876e-01   p_joint 6.273292e-05

Joint ci ratio: 3.881255e-01	ci left: 5.078186e-05	ci right 7.575514e-05	k: 101	n:1620000
Cons ci ratio: 9.629326e-04	ci left: 9.105116e-01	ci right 9.113894e-01	k: 1475741	n:1620000
KS ci ratio: 1.385925e+00	ci left: 1.737263e-06	ci right 8.902866e-06	k: 7	n:1620000
IL32   1620000 perm   1269 sec   (1277 perm/sec)   p_kst 4.320988e-06   p_cons 9.109512e-01   p_joint 6.234568e-05

Joint ci ratio: 4.155077e-01	ci left: 4.329996e-05	ci right 6.651398e-05	k: 88	n:1630000
Cons ci ratio: 9.601068e-04	ci left: 9.104905e-01	ci right 9.113657e-01	k: 1484814	n:1630000
KS ci ratio: 1.385925e+00	ci left: 1.726605e-06	ci right 8.848247e-06	k: 7	n:1630000
IL32   1630000 perm   1283 sec   (1270 perm/sec)   p_kst 4.294479e-06   p_cons 9.109288e-01   p_joint 5.398773e-05

Joint ci ratio: 4.155078e-01	ci left: 4.303593e-05	ci right 6.610841e-05	k: 88	n:1640000
Cons ci ratio: 9.571978e-04	ci left: 9.104880e-01	ci right 9.113605e-01	k: 1493917	n:1640000
KS ci ratio: 1.385925e+00	ci left: 1.716077e-06	ci right 8.794294e-06	k: 7	n:1640000
IL32   1640000 perm   1298 sec   (1264 perm/sec)   p_kst 4.268293e-06   p_cons 9.109250e-01   p_joint 5.365854e-05

Joint ci ratio: 4.131929e-01	ci left: 4.331798e-05	ci right 6.637665e-05	k: 89	n:1650000
Cons ci ratio: 9.541511e-04	ci left: 9.105135e-01	ci right 9.113833e-01	k: 1503066	n:1650000
KS ci ratio: 1.385926e+00	ci left: 1.705676e-06	ci right 8.740996e-06	k: 7	n:1650000
IL32   1650000 perm   1313 sec   (1256 perm/sec)   p_kst 4.242424e-06   p_cons 9.109491e-01   p_joint 5.393939e-05

Joint ci ratio: 4.226934e-01	ci left: 4.090079e-05	ci right 6.331517e-05	k: 85	n:1660000
Cons ci ratio: 9.512781e-04	ci left: 9.105139e-01	ci right 9.113811e-01	k: 1512174	n:1660000
KS ci ratio: 1.385926e+00	ci left: 1.695401e-06	ci right 8.688339e-06	k: 7	n:1660000
IL32   1660000 perm   1328 sec   (1250 perm/sec)   p_kst 4.216867e-06   p_cons 9.109482e-01   p_joint 5.120482e-05

Joint ci ratio: 4.226935e-01	ci left: 4.065587e-05	ci right 6.293604e-05	k: 85	n:1670000
Cons ci ratio: 9.484763e-04	ci left: 9.105065e-01	ci right 9.113711e-01	k: 1521269	n:1670000
KS ci ratio: 1.385926e+00	ci left: 1.685249e-06	ci right 8.636313e-06	k: 7	n:1670000
IL32   1670000 perm   1343 sec   (1244 perm/sec)   p_kst 4.191617e-06   p_cons 9.109395e-01   p_joint 5.089820e-05

Joint ci ratio: 4.226935e-01	ci left: 4.041387e-05	ci right 6.256142e-05	k: 85	n:1680000
Cons ci ratio: 9.456194e-04	ci left: 9.105129e-01	ci right 9.113749e-01	k: 1530387	n:1680000
KS ci ratio: 1.385926e+00	ci left: 1.675218e-06	ci right 8.584907e-06	k: 7	n:1680000
IL32   1680000 perm   1357 sec   (1238 perm/sec)   p_kst 4.166667e-06   p_cons 9.109446e-01   p_joint 5.059524e-05

Joint ci ratio: 4.226936e-01	ci left: 4.017474e-05	ci right 6.219124e-05	k: 85	n:1690000
Cons ci ratio: 9.429669e-04	ci left: 9.104885e-01	ci right 9.113480e-01	k: 1539453	n:1690000
KS ci ratio: 1.385926e+00	ci left: 1.665305e-06	ci right 8.534109e-06	k: 7	n:1690000
IL32   1690000 perm   1372 sec   (1232 perm/sec)   p_kst 4.142012e-06   p_cons 9.109189e-01   p_joint 5.029586e-05

Joint ci ratio: 4.202572e-01	ci left: 4.046425e-05	ci right 6.247569e-05	k: 86	n:1700000
Cons ci ratio: 9.402343e-04	ci left: 9.104820e-01	ci right 9.113390e-01	k: 1548549	n:1700000
KS ci ratio: 1.385926e+00	ci left: 1.655509e-06	ci right 8.483908e-06	k: 7	n:1700000
IL32   1700000 perm   1387 sec   (1226 perm/sec)   p_kst 4.117647e-06   p_cons 9.109112e-01   p_joint 5.058824e-05

Joint ci ratio: 4.410241e-01	ci left: 3.605616e-05	ci right 5.692806e-05	k: 78	n:1710000
Cons ci ratio: 9.373767e-04	ci left: 9.105013e-01	ci right 9.113558e-01	k: 1557689	n:1710000
KS ci ratio: 1.385926e+00	ci left: 1.645828e-06	ci right 8.434295e-06	k: 7	n:1710000
IL32   1710000 perm   1402 sec   (1220 perm/sec)   p_kst 4.093567e-06   p_cons 9.109292e-01   p_joint 4.561404e-05

Joint ci ratio: 4.382590e-01	ci left: 3.636356e-05	ci right 5.724245e-05	k: 79	n:1720000
Cons ci ratio: 9.345818e-04	ci left: 9.105140e-01	ci right 9.113660e-01	k: 1566818	n:1720000
KS ci ratio: 1.385926e+00	ci left: 1.636259e-06	ci right 8.385258e-06	k: 7	n:1720000
IL32   1720000 perm   1417 sec   (1214 perm/sec)   p_kst 4.069767e-06   p_cons 9.109407e-01   p_joint 4.593023e-05

Joint ci ratio: 4.382591e-01	ci left: 3.615337e-05	ci right 5.691157e-05	k: 79	n:1730000
Cons ci ratio: 9.317454e-04	ci left: 9.105382e-01	ci right 9.113876e-01	k: 1575967	n:1730000
KS ci ratio: 1.385926e+00	ci left: 1.626801e-06	ci right 8.336789e-06	k: 7	n:1730000
IL32   1730000 perm   1431 sec   (1209 perm/sec)   p_kst 4.046243e-06   p_cons 9.109636e-01   p_joint 4.566474e-05

Joint ci ratio: 4.355453e-01	ci left: 3.645707e-05	ci right 5.722205e-05	k: 80	n:1740000
Cons ci ratio: 9.291583e-04	ci left: 9.105230e-01	ci right 9.113699e-01	k: 1585048	n:1740000
KS ci ratio: 1.385926e+00	ci left: 1.617452e-06	ci right 8.288876e-06	k: 7	n:1740000
IL32   1740000 perm   1446 sec   (1203 perm/sec)   p_kst 4.022989e-06   p_cons 9.109471e-01   p_joint 4.597701e-05

Joint ci ratio: 4.355454e-01	ci left: 3.624875e-05	ci right 5.689507e-05	k: 80	n:1750000
Cons ci ratio: 9.266775e-04	ci left: 9.104930e-01	ci right 9.113377e-01	k: 1594103	n:1750000
KS ci ratio: 1.385926e+00	ci left: 1.608209e-06	ci right 8.241511e-06	k: 7	n:1750000
IL32   1750000 perm   1461 sec   (1198 perm/sec)   p_kst 4.000000e-06   p_cons 9.109160e-01   p_joint 4.571429e-05

Joint ci ratio: 4.355454e-01	ci left: 3.604279e-05	ci right 5.657180e-05	k: 80	n:1760000
Cons ci ratio: 9.241419e-04	ci left: 9.104764e-01	ci right 9.113188e-01	k: 1603181	n:1760000
KS ci ratio: 1.385926e+00	ci left: 1.599071e-06	ci right 8.194685e-06	k: 7	n:1760000
IL32   1760000 perm   1476 sec   (1192 perm/sec)   p_kst 3.977273e-06   p_cons 9.108983e-01   p_joint 4.545455e-05

Joint ci ratio: 4.355455e-01	ci left: 3.583915e-05	ci right 5.625219e-05	k: 80	n:1770000
Cons ci ratio: 9.215757e-04	ci left: 9.104692e-01	ci right 9.113092e-01	k: 1612275	n:1770000
KS ci ratio: 1.385926e+00	ci left: 1.590037e-06	ci right 8.148387e-06	k: 7	n:1770000
IL32   1770000 perm   1491 sec   (1187 perm/sec)   p_kst 3.954802e-06   p_cons 9.108898e-01   p_joint 4.519774e-05

Joint ci ratio: 4.355455e-01	ci left: 3.563781e-05	ci right 5.593617e-05	k: 80	n:1780000
Cons ci ratio: 9.189194e-04	ci left: 9.104817e-01	ci right 9.113192e-01	k: 1621404	n:1780000
KS ci ratio: 1.385926e+00	ci left: 1.581104e-06	ci right 8.102610e-06	k: 7	n:1780000
IL32   1780000 perm   1507 sec   (1182 perm/sec)   p_kst 3.932584e-06   p_cons 9.109011e-01   p_joint 4.494382e-05

Joint ci ratio: 4.355456e-01	ci left: 3.543872e-05	ci right 5.562368e-05	k: 80	n:1790000
Cons ci ratio: 9.163175e-04	ci left: 9.104884e-01	ci right 9.113236e-01	k: 1630523	n:1790000
KS ci ratio: 1.385926e+00	ci left: 1.572271e-06	ci right 8.057344e-06	k: 7	n:1790000
IL32   1790000 perm   1522 sec   (1176 perm/sec)   p_kst 3.910615e-06   p_cons 9.109067e-01   p_joint 4.469274e-05

Joint ci ratio: 4.355456e-01	ci left: 3.524183e-05	ci right 5.531466e-05	k: 80	n:1800000
Cons ci ratio: 9.137501e-04	ci left: 9.104929e-01	ci right 9.113258e-01	k: 1639638	n:1800000
KS ci ratio: 1.385926e+00	ci left: 1.563536e-06	ci right 8.012581e-06	k: 7	n:1800000
IL32   1800000 perm   1538 sec   (1171 perm/sec)   p_kst 3.888889e-06   p_cons 9.109100e-01   p_joint 4.444444e-05

Joint ci ratio: 4.355457e-01	ci left: 3.504713e-05	ci right 5.500905e-05	k: 80	n:1810000
Cons ci ratio: 9.111172e-04	ci left: 9.105128e-01	ci right 9.113433e-01	k: 1648781	n:1810000
KS ci ratio: 1.385926e+00	ci left: 1.554898e-06	ci right 7.968313e-06	k: 7	n:1810000
IL32   1810000 perm   1553 sec   (1165 perm/sec)   p_kst 3.867403e-06   p_cons 9.109287e-01   p_joint 4.419890e-05

Joint ci ratio: 4.328817e-01	ci left: 3.534394e-05	ci right 5.531597e-05	k: 81	n:1820000
Cons ci ratio: 9.085501e-04	ci left: 9.105248e-01	ci right 9.113530e-01	k: 1657910	n:1820000
KS ci ratio: 1.385926e+00	ci left: 1.546355e-06	ci right 7.924531e-06	k: 7	n:1820000
IL32   1820000 perm   1569 sec   (1160 perm/sec)   p_kst 3.846154e-06   p_cons 9.109396e-01   p_joint 4.450549e-05

Joint ci ratio: 4.526332e-01	ci left: 3.175200e-05	ci right 5.076489e-05	k: 74	n:1830000
Cons ci ratio: 9.061326e-04	ci left: 9.105137e-01	ci right 9.113396e-01	k: 1666997	n:1830000
KS ci ratio: 1.385926e+00	ci left: 1.537905e-06	ci right 7.881227e-06	k: 7	n:1830000
IL32   1830000 perm   1585 sec   (1155 perm/sec)   p_kst 3.825137e-06   p_cons 9.109273e-01   p_joint 4.043716e-05

Joint ci ratio: 4.526333e-01	ci left: 3.157943e-05	ci right 5.048899e-05	k: 74	n:1840000
Cons ci ratio: 9.036466e-04	ci left: 9.105185e-01	ci right 9.113422e-01	k: 1676113	n:1840000
KS ci ratio: 1.385926e+00	ci left: 1.529546e-06	ci right 7.838395e-06	k: 7	n:1840000
IL32   1840000 perm   1600 sec   (1150 perm/sec)   p_kst 3.804348e-06   p_cons 9.109310e-01   p_joint 4.021739e-05

Joint ci ratio: 4.719036e-01	ci left: 2.854317e-05	ci right 4.659772e-05	k: 68	n:1850000
Cons ci ratio: 9.011569e-04	ci left: 9.105276e-01	ci right 9.113490e-01	k: 1685237	n:1850000
KS ci ratio: 1.385926e+00	ci left: 1.521279e-06	ci right 7.796025e-06	k: 7	n:1850000
IL32   1850000 perm   1616 sec   (1145 perm/sec)   p_kst 3.783784e-06   p_cons 9.109389e-01   p_joint 3.675676e-05

Joint ci ratio: 4.719037e-01	ci left: 2.838971e-05	ci right 4.634719e-05	k: 68	n:1860000
Cons ci ratio: 8.988276e-04	ci left: 9.105112e-01	ci right 9.113305e-01	k: 1694314	n:1860000
KS ci ratio: 1.385926e+00	ci left: 1.513100e-06	ci right 7.754111e-06	k: 7	n:1860000
IL32   1860000 perm   1632 sec   (1140 perm/sec)   p_kst 3.763441e-06   p_cons 9.109215e-01   p_joint 3.655914e-05

Joint ci ratio: 4.719037e-01	ci left: 2.823789e-05	ci right 4.609935e-05	k: 68	n:1870000
Cons ci ratio: 8.964808e-04	ci left: 9.105015e-01	ci right 9.113186e-01	k: 1703403	n:1870000
KS ci ratio: 1.385926e+00	ci left: 1.505008e-06	ci right 7.712645e-06	k: 7	n:1870000
IL32   1870000 perm   1647 sec   (1135 perm/sec)   p_kst 3.743316e-06   p_cons 9.109107e-01   p_joint 3.636364e-05

Joint ci ratio: 4.685208e-01	ci left: 2.855655e-05	ci right 4.644867e-05	k: 69	n:1880000
Cons ci ratio: 8.942079e-04	ci left: 9.104817e-01	ci right 9.112968e-01	k: 1712473	n:1880000
KS ci ratio: 1.385926e+00	ci left: 1.497003e-06	ci right 7.671621e-06	k: 7	n:1880000
IL32   1880000 perm   1663 sec   (1131 perm/sec)   p_kst 3.723404e-06   p_cons 9.108899e-01   p_joint 3.670213e-05

Joint ci ratio: 4.685208e-01	ci left: 2.840546e-05	ci right 4.620291e-05	k: 69	n:1890000
Cons ci ratio: 8.919144e-04	ci left: 9.104691e-01	ci right 9.112820e-01	k: 1721556	n:1890000
KS ci ratio: 1.385926e+00	ci left: 1.489082e-06	ci right 7.631030e-06	k: 7	n:1890000
IL32   1890000 perm   1679 sec   (1126 perm/sec)   p_kst 3.703704e-06   p_cons 9.108762e-01   p_joint 3.650794e-05

Joint ci ratio: 4.685209e-01	ci left: 2.825596e-05	ci right 4.595973e-05	k: 69	n:1900000
Cons ci ratio: 8.896125e-04	ci left: 9.104613e-01	ci right 9.112722e-01	k: 1730648	n:1900000
KS ci ratio: 1.385926e+00	ci left: 1.481245e-06	ci right 7.590867e-06	k: 7	n:1900000
IL32   1900000 perm   1694 sec   (1121 perm/sec)   p_kst 3.684211e-06   p_cons 9.108674e-01   p_joint 3.631579e-05

Joint ci ratio: 4.685209e-01	ci left: 2.810802e-05	ci right 4.571911e-05	k: 69	n:1910000
Cons ci ratio: 8.871280e-04	ci left: 9.104904e-01	ci right 9.112990e-01	k: 1739810	n:1910000
KS ci ratio: 1.385926e+00	ci left: 1.473490e-06	ci right 7.551124e-06	k: 7	n:1910000
IL32   1910000 perm   1711 sec   (1116 perm/sec)   p_kst 3.664921e-06   p_cons 9.108953e-01   p_joint 3.612565e-05

Joint ci ratio: 4.685210e-01	ci left: 2.796162e-05	ci right 4.548099e-05	k: 69	n:1920000
Cons ci ratio: 8.848799e-04	ci left: 9.104794e-01	ci right 9.112860e-01	k: 1748896	n:1920000
KS ci ratio: 1.385926e+00	ci left: 1.465815e-06	ci right 7.511796e-06	k: 7	n:1920000
IL32   1920000 perm   1727 sec   (1112 perm/sec)   p_kst 3.645833e-06   p_cons 9.108833e-01   p_joint 3.593750e-05

Joint ci ratio: 4.685210e-01	ci left: 2.781674e-05	ci right 4.524534e-05	k: 69	n:1930000
Cons ci ratio: 8.825700e-04	ci left: 9.104832e-01	ci right 9.112876e-01	k: 1758010	n:1930000
KS ci ratio: 1.385926e+00	ci left: 1.458220e-06	ci right 7.472874e-06	k: 7	n:1930000
IL32   1930000 perm   1743 sec   (1107 perm/sec)   p_kst 3.626943e-06   p_cons 9.108860e-01   p_joint 3.575130e-05

Joint ci ratio: 4.685210e-01	ci left: 2.767336e-05	ci right 4.501212e-05	k: 69	n:1940000
Cons ci ratio: 8.802444e-04	ci left: 9.104931e-01	ci right 9.112954e-01	k: 1767136	n:1940000
KS ci ratio: 1.385926e+00	ci left: 1.450704e-06	ci right 7.434355e-06	k: 7	n:1940000
IL32   1940000 perm   1759 sec   (1103 perm/sec)   p_kst 3.608247e-06   p_cons 9.108948e-01   p_joint 3.556701e-05

Joint ci ratio: 4.685211e-01	ci left: 2.753144e-05	ci right 4.478129e-05	k: 69	n:1950000
Cons ci ratio: 8.779954e-04	ci left: 9.104921e-01	ci right 9.112923e-01	k: 1776241	n:1950000
KS ci ratio: 1.385926e+00	ci left: 1.443264e-06	ci right 7.396230e-06	k: 7	n:1950000
IL32   1950000 perm   1776 sec   (1098 perm/sec)   p_kst 3.589744e-06   p_cons 9.108928e-01   p_joint 3.538462e-05

Joint ci ratio: 4.652099e-01	ci left: 2.784114e-05	ci right 4.512264e-05	k: 70	n:1960000
Cons ci ratio: 8.758186e-04	ci left: 9.104809e-01	ci right 9.112791e-01	k: 1785326	n:1960000
KS ci ratio: 1.385926e+00	ci left: 1.435901e-06	ci right 7.358494e-06	k: 7	n:1960000
IL32   1960000 perm   1792 sec   (1094 perm/sec)   p_kst 3.571429e-06   p_cons 9.108806e-01   p_joint 3.571429e-05

Joint ci ratio: 4.652099e-01	ci left: 2.769981e-05	ci right 4.489359e-05	k: 70	n:1970000
Cons ci ratio: 8.735214e-04	ci left: 9.104952e-01	ci right 9.112914e-01	k: 1794461	n:1970000
KS ci ratio: 1.385926e+00	ci left: 1.428612e-06	ci right 7.321141e-06	k: 7	n:1970000
IL32   1970000 perm   1809 sec   (1089 perm/sec)   p_kst 3.553299e-06   p_cons 9.108939e-01   p_joint 3.553299e-05

Joint ci ratio: 4.652100e-01	ci left: 2.755992e-05	ci right 4.466686e-05	k: 70	n:1980000
Cons ci ratio: 8.712909e-04	ci left: 9.105003e-01	ci right 9.112945e-01	k: 1803578	n:1980000
KS ci ratio: 1.385926e+00	ci left: 1.421397e-06	ci right 7.284166e-06	k: 7	n:1980000
IL32   1980000 perm   1825 sec   (1085 perm/sec)   p_kst 3.535354e-06   p_cons 9.108980e-01   p_joint 3.535354e-05

Joint ci ratio: 4.619680e-01	ci left: 2.786522e-05	ci right 4.500323e-05	k: 71	n:1990000
Cons ci ratio: 8.690424e-04	ci left: 9.105119e-01	ci right 9.113040e-01	k: 1812708	n:1990000
KS ci ratio: 1.385926e+00	ci left: 1.414254e-06	ci right 7.247562e-06	k: 7	n:1990000
IL32   1990000 perm   1841 sec   (1081 perm/sec)   p_kst 3.517588e-06   p_cons 9.109085e-01   p_joint 3.567839e-05

Joint ci ratio: 4.619680e-01	ci left: 2.772590e-05	ci right 4.477821e-05	k: 71	n:2000000
Cons ci ratio: 8.670595e-04	ci left: 9.104768e-01	ci right 9.112670e-01	k: 1821745	n:2000000
KS ci ratio: 1.385926e+00	ci left: 1.407183e-06	ci right 7.211324e-06	k: 7	n:2000000
IL32   2000000 perm   1858 sec   (1077 perm/sec)   p_kst 3.500000e-06   p_cons 9.108725e-01   p_joint 3.550000e-05

Joint ci ratio: 4.587929e-01	ci left: 2.802775e-05	ci right 4.511028e-05	k: 72	n:2010000
Cons ci ratio: 8.649231e-04	ci left: 9.104734e-01	ci right 9.112617e-01	k: 1830845	n:2010000
KS ci ratio: 1.385926e+00	ci left: 1.400182e-06	ci right 7.175447e-06	k: 7	n:2010000
IL32   2010000 perm   1874 sec   (1072 perm/sec)   p_kst 3.482587e-06   p_cons 9.108682e-01   p_joint 3.582090e-05

Joint ci ratio: 4.587929e-01	ci left: 2.788900e-05	ci right 4.488696e-05	k: 72	n:2020000
Cons ci ratio: 8.627918e-04	ci left: 9.104721e-01	ci right 9.112584e-01	k: 1839949	n:2020000
KS ci ratio: 1.385926e+00	ci left: 1.393250e-06	ci right 7.139925e-06	k: 7	n:2020000
IL32   2020000 perm   1891 sec   (1068 perm/sec)   p_kst 3.465347e-06   p_cons 9.108658e-01   p_joint 3.564356e-05

Joint ci ratio: 4.587929e-01	ci left: 2.775161e-05	ci right 4.466585e-05	k: 72	n:2030000
Cons ci ratio: 8.606266e-04	ci left: 9.104801e-01	ci right 9.112645e-01	k: 1849072	n:2030000
KS ci ratio: 1.385926e+00	ci left: 1.386387e-06	ci right 7.104753e-06	k: 7	n:2030000
IL32   2030000 perm   1907 sec   (1064 perm/sec)   p_kst 3.448276e-06   p_cons 9.108729e-01   p_joint 3.546798e-05

Joint ci ratio: 4.587930e-01	ci left: 2.761557e-05	ci right 4.444690e-05	k: 72	n:2040000
Cons ci ratio: 8.585062e-04	ci left: 9.104827e-01	ci right 9.112652e-01	k: 1858184	n:2040000
KS ci ratio: 1.385926e+00	ci left: 1.379591e-06	ci right 7.069926e-06	k: 7	n:2040000
IL32   2040000 perm   1924 sec   (1060 perm/sec)   p_kst 3.431373e-06   p_cons 9.108745e-01   p_joint 3.529412e-05

Joint ci ratio: 4.587930e-01	ci left: 2.748086e-05	ci right 4.423008e-05	k: 72	n:2050000
Cons ci ratio: 8.564425e-04	ci left: 9.104774e-01	ci right 9.112580e-01	k: 1867280	n:2050000
KS ci ratio: 1.385926e+00	ci left: 1.372861e-06	ci right 7.035439e-06	k: 7	n:2050000
IL32   2050000 perm   1941 sec   (1056 perm/sec)   p_kst 3.414634e-06   p_cons 9.108683e-01   p_joint 3.512195e-05

Joint ci ratio: 4.587931e-01	ci left: 2.734746e-05	ci right 4.401538e-05	k: 72	n:2060000
Cons ci ratio: 8.543962e-04	ci left: 9.104717e-01	ci right 9.112504e-01	k: 1876375	n:2060000
KS ci ratio: 1.385926e+00	ci left: 1.366197e-06	ci right 7.001286e-06	k: 7	n:2060000
IL32   2060000 perm   1958 sec   (1052 perm/sec)   p_kst 3.398058e-06   p_cons 9.108617e-01   p_joint 3.495146e-05

Joint ci ratio: 4.587931e-01	ci left: 2.721535e-05	ci right 4.380274e-05	k: 72	n:2070000
Cons ci ratio: 8.524227e-04	ci left: 9.104549e-01	ci right 9.112318e-01	k: 1885447	n:2070000
KS ci ratio: 1.385926e+00	ci left: 1.359597e-06	ci right 6.967464e-06	k: 7	n:2070000
IL32   2070000 perm   1975 sec   (1048 perm/sec)   p_kst 3.381643e-06   p_cons 9.108440e-01   p_joint 3.478261e-05

Joint ci ratio: 4.587931e-01	ci left: 2.708450e-05	ci right 4.359215e-05	k: 72	n:2080000
Cons ci ratio: 8.504176e-04	ci left: 9.104470e-01	ci right 9.112221e-01	k: 1894537	n:2080000
KS ci ratio: 1.385926e+00	ci left: 1.353060e-06	ci right 6.933966e-06	k: 7	n:2080000
IL32   2080000 perm   1993 sec   (1044 perm/sec)   p_kst 3.365385e-06   p_cons 9.108351e-01   p_joint 3.461538e-05

Joint ci ratio: 4.526344e-01	ci left: 2.780197e-05	ci right 4.444967e-05	k: 74	n:2090000
Cons ci ratio: 8.483815e-04	ci left: 9.104478e-01	ci right 9.112210e-01	k: 1903645	n:2090000
KS ci ratio: 1.385926e+00	ci left: 1.346586e-06	ci right 6.900789e-06	k: 7	n:2090000
IL32   2090000 perm   2010 sec   (1040 perm/sec)   p_kst 3.349282e-06   p_cons 9.108349e-01   p_joint 3.540670e-05

Joint ci ratio: 4.526344e-01	ci left: 2.766958e-05	ci right 4.423800e-05	k: 74	n:2100000
Cons ci ratio: 8.463972e-04	ci left: 9.104414e-01	ci right 9.112127e-01	k: 1912738	n:2100000
KS ci ratio: 1.385926e+00	ci left: 1.340174e-06	ci right 6.867929e-06	k: 7	n:2100000
IL32   2100000 perm   2028 sec   (1036 perm/sec)   p_kst 3.333333e-06   p_cons 9.108276e-01   p_joint 3.523810e-05

Joint ci ratio: 4.526345e-01	ci left: 2.753845e-05	ci right 4.402834e-05	k: 74	n:2110000
Cons ci ratio: 8.444170e-04	ci left: 9.104369e-01	ci right 9.112065e-01	k: 1921835	n:2110000
KS ci ratio: 1.385926e+00	ci left: 1.333822e-06	ci right 6.835379e-06	k: 7	n:2110000
IL32   2110000 perm   2045 sec   (1032 perm/sec)   p_kst 3.317536e-06   p_cons 9.108223e-01   p_joint 3.507109e-05

Joint ci ratio: 4.496467e-01	ci left: 2.782664e-05	ci right 4.434563e-05	k: 75	n:2120000
Cons ci ratio: 8.425141e-04	ci left: 9.104202e-01	ci right 9.111881e-01	k: 1930906	n:2120000
KS ci ratio: 1.385926e+00	ci left: 1.327531e-06	ci right 6.803137e-06	k: 7	n:2120000
IL32   2120000 perm   2063 sec   (1028 perm/sec)   p_kst 3.301887e-06   p_cons 9.108047e-01   p_joint 3.537736e-05

Joint ci ratio: 4.496467e-01	ci left: 2.769599e-05	ci right 4.413743e-05	k: 75	n:2130000
Cons ci ratio: 8.405997e-04	ci left: 9.104084e-01	ci right 9.111745e-01	k: 1939987	n:2130000
KS ci ratio: 1.385926e+00	ci left: 1.321298e-06	ci right 6.771197e-06	k: 7	n:2130000
IL32   2130000 perm   2080 sec   (1024 perm/sec)   p_kst 3.286385e-06   p_cons 9.107920e-01   p_joint 3.521127e-05

Joint ci ratio: 4.496467e-01	ci left: 2.756657e-05	ci right 4.393118e-05	k: 75	n:2140000
Cons ci ratio: 8.386356e-04	ci left: 9.104089e-01	ci right 9.111732e-01	k: 1949094	n:2140000
KS ci ratio: 1.385926e+00	ci left: 1.315124e-06	ci right 6.739556e-06	k: 7	n:2140000
IL32   2140000 perm   2098 sec   (1020 perm/sec)   p_kst 3.271028e-06   p_cons 9.107916e-01   p_joint 3.504673e-05

Joint ci ratio: 4.496468e-01	ci left: 2.743836e-05	ci right 4.372685e-05	k: 75	n:2150000
Cons ci ratio: 8.367570e-04	ci left: 9.103954e-01	ci right 9.111579e-01	k: 1958171	n:2150000
KS ci ratio: 1.385926e+00	ci left: 1.309007e-06	ci right 6.708210e-06	k: 7	n:2150000
IL32   2150000 perm   2116 sec   (1016 perm/sec)   p_kst 3.255814e-06   p_cons 9.107772e-01   p_joint 3.488372e-05

Joint ci ratio: 4.467174e-01	ci left: 2.772202e-05	ci right 4.403931e-05	k: 76	n:2160000
Cons ci ratio: 8.348459e-04	ci left: 9.103908e-01	ci right 9.111516e-01	k: 1967267	n:2160000
KS ci ratio: 1.385926e+00	ci left: 1.302947e-06	ci right 6.677153e-06	k: 7	n:2160000
IL32   2160000 perm   2134 sec   (1012 perm/sec)   p_kst 3.240741e-06   p_cons 9.107718e-01   p_joint 3.518519e-05

Joint ci ratio: 4.438445e-01	ci left: 2.800341e-05	ci right 4.434855e-05	k: 77	n:2170000
Cons ci ratio: 8.329075e-04	ci left: 9.103941e-01	ci right 9.111532e-01	k: 1976380	n:2170000
KS ci ratio: 1.385926e+00	ci left: 1.296942e-06	ci right 6.646383e-06	k: 7	n:2170000
IL32   2170000 perm   2152 sec   (1008 perm/sec)   p_kst 3.225806e-06   p_cons 9.107742e-01   p_joint 3.548387e-05

Joint ci ratio: 4.438446e-01	ci left: 2.787496e-05	ci right 4.414512e-05	k: 77	n:2180000
Cons ci ratio: 8.309850e-04	ci left: 9.103970e-01	ci right 9.111542e-01	k: 1985492	n:2180000
KS ci ratio: 1.385926e+00	ci left: 1.290993e-06	ci right 6.615895e-06	k: 7	n:2180000
IL32   2180000 perm   2170 sec   (1005 perm/sec)   p_kst 3.211009e-06   p_cons 9.107761e-01   p_joint 3.532110e-05

Joint ci ratio: 4.438446e-01	ci left: 2.774767e-05	ci right 4.394355e-05	k: 77	n:2190000
Cons ci ratio: 8.291316e-04	ci left: 9.103888e-01	ci right 9.111444e-01	k: 1994580	n:2190000
KS ci ratio: 1.385926e+00	ci left: 1.285098e-06	ci right 6.585685e-06	k: 7	n:2190000
IL32   2190000 perm   2188 sec   (1001 perm/sec)   p_kst 3.196347e-06   p_cons 9.107671e-01   p_joint 3.515982e-05

Joint ci ratio: 4.438446e-01	ci left: 2.762155e-05	ci right 4.374380e-05	k: 77	n:2200000
Cons ci ratio: 8.273068e-04	ci left: 9.103775e-01	ci right 9.111314e-01	k: 2003661	n:2200000
KS ci ratio: 1.385926e+00	ci left: 1.279257e-06	ci right 6.555750e-06	k: 7	n:2200000
IL32   2200000 perm   2206 sec   (997 perm/sec)   p_kst 3.181818e-06   p_cons 9.107550e-01   p_joint 3.500000e-05

Joint ci ratio: 4.438447e-01	ci left: 2.749656e-05	ci right 4.354587e-05	k: 77	n:2210000
Cons ci ratio: 8.254687e-04	ci left: 9.103713e-01	ci right 9.111235e-01	k: 2012753	n:2210000
KS ci ratio: 1.385926e+00	ci left: 1.273468e-06	ci right 6.526086e-06	k: 7	n:2210000
IL32   2210000 perm   2225 sec   (993 perm/sec)   p_kst 3.167421e-06   p_cons 9.107480e-01   p_joint 3.484163e-05

Joint ci ratio: 4.438447e-01	ci left: 2.737270e-05	ci right 4.334972e-05	k: 77	n:2220000
Cons ci ratio: 8.236496e-04	ci left: 9.103638e-01	ci right 9.111144e-01	k: 2021842	n:2220000
KS ci ratio: 1.385926e+00	ci left: 1.267732e-06	ci right 6.496690e-06	k: 7	n:2220000
IL32   2220000 perm   2243 sec   (990 perm/sec)   p_kst 3.153153e-06   p_cons 9.107396e-01   p_joint 3.468468e-05

Joint ci ratio: 4.382614e-01	ci left: 2.804720e-05	ci right 4.415118e-05	k: 79	n:2230000
Cons ci ratio: 8.218492e-04	ci left: 9.103551e-01	ci right 9.111040e-01	k: 2030928	n:2230000
KS ci ratio: 1.385926e+00	ci left: 1.262047e-06	ci right 6.467557e-06	k: 7	n:2230000
IL32   2230000 perm   2261 sec   (986 perm/sec)   p_kst 3.139013e-06   p_cons 9.107300e-01   p_joint 3.542601e-05

Joint ci ratio: 4.788970e-01	ci left: 2.278775e-05	ci right 3.748565e-05	k: 66	n:2240000
Cons ci ratio: 8.199030e-04	ci left: 9.103777e-01	ci right 9.111248e-01	k: 2040084	n:2240000
KS ci ratio: 1.385927e+00	ci left: 1.256413e-06	ci right 6.438684e-06	k: 7	n:2240000
IL32   2240000 perm   2280 sec   (983 perm/sec)   p_kst 3.125000e-06   p_cons 9.107518e-01   p_joint 2.946429e-05

Joint ci ratio: 4.788970e-01	ci left: 2.268647e-05	ci right 3.731904e-05	k: 66	n:2250000
Cons ci ratio: 8.181249e-04	ci left: 9.103694e-01	ci right 9.111149e-01	k: 2049171	n:2250000
KS ci ratio: 1.385927e+00	ci left: 1.250829e-06	ci right 6.410067e-06	k: 7	n:2250000
IL32   2250000 perm   2298 sec   (979 perm/sec)   p_kst 3.111111e-06   p_cons 9.107427e-01   p_joint 2.933333e-05

Joint ci ratio: 4.788970e-01	ci left: 2.258609e-05	ci right 3.715392e-05	k: 66	n:2260000
Cons ci ratio: 8.162672e-04	ci left: 9.103793e-01	ci right 9.111232e-01	k: 2058299	n:2260000
KS ci ratio: 1.385927e+00	ci left: 1.245294e-06	ci right 6.381704e-06	k: 7	n:2260000
IL32   2260000 perm   2317 sec   (975 perm/sec)   p_kst 3.097345e-06   p_cons 9.107518e-01   p_joint 2.920354e-05

Joint ci ratio: 4.753626e-01	ci left: 2.287411e-05	ci right 3.748339e-05	k: 67	n:2270000
Cons ci ratio: 8.144529e-04	ci left: 9.103830e-01	ci right 9.111252e-01	k: 2067413	n:2270000
KS ci ratio: 1.385927e+00	ci left: 1.239808e-06	ci right 6.353591e-06	k: 7	n:2270000
IL32   2270000 perm   2336 sec   (972 perm/sec)   p_kst 3.083700e-06   p_cons 9.107546e-01   p_joint 2.951542e-05

Joint ci ratio: 4.938666e-01	ci left: 2.084877e-05	ci right 3.486004e-05	k: 62	n:2280000
Cons ci ratio: 8.125564e-04	ci left: 9.104056e-01	ci right 9.111460e-01	k: 2076570	n:2280000
KS ci ratio: 1.385927e+00	ci left: 1.234371e-06	ci right 6.325725e-06	k: 7	n:2280000
IL32   2280000 perm   2354 sec   (968 perm/sec)   p_kst 3.070175e-06   p_cons 9.107763e-01   p_joint 2.719298e-05

Joint ci ratio: 4.938667e-01	ci left: 2.075772e-05	ci right 3.470782e-05	k: 62	n:2290000
Cons ci ratio: 8.108103e-04	ci left: 9.104003e-01	ci right 9.111392e-01	k: 2085664	n:2290000
KS ci ratio: 1.385927e+00	ci left: 1.228980e-06	ci right 6.298101e-06	k: 7	n:2290000
IL32   2290000 perm   2373 sec   (965 perm/sec)   p_kst 3.056769e-06   p_cons 9.107703e-01   p_joint 2.707424e-05

Joint ci ratio: 4.938667e-01	ci left: 2.066747e-05	ci right 3.455691e-05	k: 62	n:2300000
Cons ci ratio: 8.090819e-04	ci left: 9.103939e-01	ci right 9.111312e-01	k: 2094755	n:2300000
KS ci ratio: 1.385927e+00	ci left: 1.223637e-06	ci right 6.270718e-06	k: 7	n:2300000
IL32   2300000 perm   2392 sec   (962 perm/sec)   p_kst 3.043478e-06   p_cons 9.107630e-01   p_joint 2.695652e-05

Joint ci ratio: 4.899931e-01	ci left: 2.095717e-05	ci right 3.489353e-05	k: 63	n:2310000
Cons ci ratio: 8.074484e-04	ci left: 9.103705e-01	ci right 9.111063e-01	k: 2103807	n:2310000
KS ci ratio: 1.385927e+00	ci left: 1.218340e-06	ci right 6.243572e-06	k: 7	n:2310000
IL32   2310000 perm   2411 sec   (958 perm/sec)   p_kst 3.030303e-06   p_cons 9.107390e-01   p_joint 2.727273e-05

Joint ci ratio: 4.825117e-01	ci left: 2.162318e-05	ci right 3.571014e-05	k: 65	n:2320000
Cons ci ratio: 8.056729e-04	ci left: 9.103781e-01	ci right 9.111123e-01	k: 2112930	n:2320000
KS ci ratio: 1.385927e+00	ci left: 1.213088e-06	ci right 6.216660e-06	k: 7	n:2320000
IL32   2320000 perm   2431 sec   (955 perm/sec)   p_kst 3.017241e-06   p_cons 9.107457e-01   p_joint 2.801724e-05

Joint ci ratio: 4.825117e-01	ci left: 2.153038e-05	ci right 3.555687e-05	k: 65	n:2330000
Cons ci ratio: 8.038285e-04	ci left: 9.104019e-01	ci right 9.111344e-01	k: 2122091	n:2330000
KS ci ratio: 1.385927e+00	ci left: 1.207882e-06	ci right 6.189980e-06	k: 7	n:2330000
IL32   2330000 perm   2450 sec   (951 perm/sec)   p_kst 3.004292e-06   p_cons 9.107687e-01   p_joint 2.789700e-05

Joint ci ratio: 4.788973e-01	ci left: 2.181391e-05	ci right 3.588370e-05	k: 66	n:2340000
Cons ci ratio: 8.020641e-04	ci left: 9.104118e-01	ci right 9.111427e-01	k: 2131220	n:2340000
KS ci ratio: 1.385927e+00	ci left: 1.202720e-06	ci right 6.163527e-06	k: 7	n:2340000
IL32   2340000 perm   2469 sec   (948 perm/sec)   p_kst 2.991453e-06   p_cons 9.107778e-01   p_joint 2.820513e-05

Joint ci ratio: 4.788973e-01	ci left: 2.172108e-05	ci right 3.573100e-05	k: 66	n:2350000
Cons ci ratio: 8.003470e-04	ci left: 9.104144e-01	ci right 9.111437e-01	k: 2140332	n:2350000
KS ci ratio: 1.385927e+00	ci left: 1.197602e-06	ci right 6.137299e-06	k: 7	n:2350000
IL32   2350000 perm   2488 sec   (945 perm/sec)   p_kst 2.978723e-06   p_cons 9.107796e-01   p_joint 2.808511e-05

Joint ci ratio: 4.788973e-01	ci left: 2.162904e-05	ci right 3.557960e-05	k: 66	n:2360000
Cons ci ratio: 7.986407e-04	ci left: 9.104170e-01	ci right 9.111447e-01	k: 2149444	n:2360000
KS ci ratio: 1.385927e+00	ci left: 1.192528e-06	ci right 6.111294e-06	k: 7	n:2360000
IL32   2360000 perm   2507 sec   (941 perm/sec)   p_kst 2.966102e-06   p_cons 9.107814e-01   p_joint 2.796610e-05

Joint ci ratio: 4.788974e-01	ci left: 2.153778e-05	ci right 3.542948e-05	k: 66	n:2370000
Cons ci ratio: 7.970157e-04	ci left: 9.104051e-01	ci right 9.111314e-01	k: 2158522	n:2370000
KS ci ratio: 1.385927e+00	ci left: 1.187496e-06	ci right 6.085507e-06	k: 7	n:2370000
IL32   2370000 perm   2527 sec   (938 perm/sec)   p_kst 2.953586e-06   p_cons 9.107688e-01   p_joint 2.784810e-05

Joint ci ratio: 4.788974e-01	ci left: 2.144729e-05	ci right 3.528062e-05	k: 66	n:2380000
Cons ci ratio: 7.952588e-04	ci left: 9.104224e-01	ci right 9.111472e-01	k: 2167669	n:2380000
KS ci ratio: 1.385927e+00	ci left: 1.182506e-06	ci right 6.059938e-06	k: 7	n:2380000
IL32   2380000 perm   2546 sec   (935 perm/sec)   p_kst 2.941176e-06   p_cons 9.107853e-01   p_joint 2.773109e-05

Joint ci ratio: 4.719056e-01	ci left: 2.209407e-05	ci right 3.606940e-05	k: 68	n:2390000
Cons ci ratio: 7.936502e-04	ci left: 9.104115e-01	ci right 9.111348e-01	k: 2176749	n:2390000
KS ci ratio: 1.385927e+00	ci left: 1.177559e-06	ci right 6.034583e-06	k: 7	n:2390000
IL32   2390000 perm   2566 sec   (931 perm/sec)   p_kst 2.928870e-06   p_cons 9.107736e-01   p_joint 2.845188e-05

Joint ci ratio: 4.719057e-01	ci left: 2.200201e-05	ci right 3.591912e-05	k: 68	n:2400000
Cons ci ratio: 7.919112e-04	ci left: 9.104295e-01	ci right 9.111512e-01	k: 2185898	n:2400000
KS ci ratio: 1.385927e+00	ci left: 1.172652e-06	ci right 6.009439e-06	k: 7	n:2400000
IL32   2400000 perm   2585 sec   (928 perm/sec)   p_kst 2.916667e-06   p_cons 9.107908e-01   p_joint 2.833333e-05

Joint ci ratio: 4.719057e-01	ci left: 2.191071e-05	ci right 3.577007e-05	k: 68	n:2410000
Cons ci ratio: 7.903309e-04	ci left: 9.104170e-01	ci right 9.111372e-01	k: 2194974	n:2410000
KS ci ratio: 1.385927e+00	ci left: 1.167786e-06	ci right 5.984503e-06	k: 7	n:2410000
IL32   2410000 perm   2605 sec   (925 perm/sec)   p_kst 2.904564e-06   p_cons 9.107776e-01   p_joint 2.821577e-05

Joint ci ratio: 4.719057e-01	ci left: 2.182017e-05	ci right 3.562226e-05	k: 68	n:2420000
Cons ci ratio: 7.885395e-04	ci left: 9.104501e-01	ci right 9.111687e-01	k: 2204160	n:2420000
KS ci ratio: 1.385927e+00	ci left: 1.162961e-06	ci right 5.959774e-06	k: 7	n:2420000
IL32   2420000 perm   2625 sec   (922 perm/sec)   p_kst 2.892562e-06   p_cons 9.108099e-01   p_joint 2.809917e-05

Joint ci ratio: 4.719057e-01	ci left: 2.173038e-05	ci right 3.547567e-05	k: 68	n:2430000
Cons ci ratio: 7.868417e-04	ci left: 9.104661e-01	ci right 9.111831e-01	k: 2213305	n:2430000
KS ci ratio: 1.385927e+00	ci left: 1.158175e-06	ci right 5.935248e-06	k: 7	n:2430000
IL32   2430000 perm   2646 sec   (918 perm/sec)   p_kst 2.880658e-06   p_cons 9.108251e-01   p_joint 2.798354e-05

Joint ci ratio: 4.719058e-01	ci left: 2.164132e-05	ci right 3.533028e-05	k: 68	n:2440000
Cons ci ratio: 7.852242e-04	ci left: 9.104675e-01	ci right 9.111831e-01	k: 2222415	n:2440000
KS ci ratio: 1.385927e+00	ci left: 1.153428e-06	ci right 5.910924e-06	k: 7	n:2440000
IL32   2440000 perm   2666 sec   (915 perm/sec)   p_kst 2.868852e-06   p_cons 9.108258e-01   p_joint 2.786885e-05

Joint ci ratio: 4.719058e-01	ci left: 2.155299e-05	ci right 3.518607e-05	k: 68	n:2450000
Cons ci ratio: 7.835792e-04	ci left: 9.104767e-01	ci right 9.111909e-01	k: 2231544	n:2450000
KS ci ratio: 1.385927e+00	ci left: 1.148720e-06	ci right 5.886797e-06	k: 7	n:2450000
IL32   2450000 perm   2686 sec   (912 perm/sec)   p_kst 2.857143e-06   p_cons 9.108343e-01   p_joint 2.775510e-05

Joint ci ratio: 4.719058e-01	ci left: 2.146537e-05	ci right 3.504304e-05	k: 68	n:2460000
Cons ci ratio: 7.819230e-04	ci left: 9.104904e-01	ci right 9.112030e-01	k: 2240684	n:2460000
KS ci ratio: 1.385927e+00	ci left: 1.144051e-06	ci right 5.862867e-06	k: 7	n:2460000
IL32   2460000 perm   2705 sec   (909 perm/sec)   p_kst 2.845528e-06   p_cons 9.108472e-01   p_joint 2.764228e-05

Joint ci ratio: 4.719059e-01	ci left: 2.137847e-05	ci right 3.490117e-05	k: 68	n:2470000
Cons ci ratio: 7.803434e-04	ci left: 9.104901e-01	ci right 9.112013e-01	k: 2249790	n:2470000
KS ci ratio: 1.385927e+00	ci left: 1.139419e-06	ci right 5.839131e-06	k: 7	n:2470000
IL32   2470000 perm   2725 sec   (906 perm/sec)   p_kst 2.834008e-06   p_cons 9.108462e-01   p_joint 2.753036e-05

Joint ci ratio: 4.719059e-01	ci left: 2.129226e-05	ci right 3.476044e-05	k: 68	n:2480000
Cons ci ratio: 7.787945e-04	ci left: 9.104854e-01	ci right 9.111951e-01	k: 2258885	n:2480000
KS ci ratio: 1.385927e+00	ci left: 1.134825e-06	ci right 5.815586e-06	k: 7	n:2480000
IL32   2480000 perm   2746 sec   (903 perm/sec)   p_kst 2.822581e-06   p_cons 9.108407e-01   p_joint 2.741935e-05

Joint ci ratio: 4.719059e-01	ci left: 2.120675e-05	ci right 3.462084e-05	k: 68	n:2490000
Cons ci ratio: 7.772837e-04	ci left: 9.104747e-01	ci right 9.111830e-01	k: 2267965	n:2490000
KS ci ratio: 1.385927e+00	ci left: 1.130267e-06	ci right 5.792230e-06	k: 7	n:2490000
IL32   2490000 perm   2766 sec   (900 perm/sec)   p_kst 2.811245e-06   p_cons 9.108293e-01   p_joint 2.730924e-05

Joint ci ratio: 4.719059e-01	ci left: 2.112192e-05	ci right 3.448236e-05	k: 68	n:2500000
Cons ci ratio: 7.756861e-04	ci left: 9.104841e-01	ci right 9.111910e-01	k: 2277095	n:2500000
KS ci ratio: 1.385927e+00	ci left: 1.125746e-06	ci right 5.769062e-06	k: 7	n:2500000
IL32   2500000 perm   2786 sec   (897 perm/sec)   p_kst 2.800000e-06   p_cons 9.108380e-01   p_joint 2.720000e-05

Joint ci ratio: 4.719060e-01	ci left: 2.103777e-05	ci right 3.434498e-05	k: 68	n:2510000
Cons ci ratio: 7.741154e-04	ci left: 9.104898e-01	ci right 9.111953e-01	k: 2286216	n:2510000
KS ci ratio: 1.385927e+00	ci left: 1.121261e-06	ci right 5.746077e-06	k: 7	n:2510000
IL32   2510000 perm   2807 sec   (894 perm/sec)   p_kst 2.788845e-06   p_cons 9.108430e-01   p_joint 2.709163e-05

Joint ci ratio: 4.719060e-01	ci left: 2.095429e-05	ci right 3.420869e-05	k: 68	n:2520000
Cons ci ratio: 7.726693e-04	ci left: 9.104713e-01	ci right 9.111754e-01	k: 2295276	n:2520000
KS ci ratio: 1.385927e+00	ci left: 1.116811e-06	ci right 5.723275e-06	k: 7	n:2520000
IL32   2520000 perm   2828 sec   (891 perm/sec)   p_kst 2.777778e-06   p_cons 9.108238e-01   p_joint 2.698413e-05

Joint ci ratio: 4.719060e-01	ci left: 2.087147e-05	ci right 3.407348e-05	k: 68	n:2530000
Cons ci ratio: 7.711394e-04	ci left: 9.104723e-01	ci right 9.111750e-01	k: 2304385	n:2530000
KS ci ratio: 1.385927e+00	ci left: 1.112397e-06	ci right 5.700654e-06	k: 7	n:2530000
IL32   2530000 perm   2849 sec   (888 perm/sec)   p_kst 2.766798e-06   p_cons 9.108241e-01   p_joint 2.687747e-05

Joint ci ratio: 4.719060e-01	ci left: 2.078929e-05	ci right 3.393933e-05	k: 68	n:2540000
Cons ci ratio: 7.696036e-04	ci left: 9.104764e-01	ci right 9.111778e-01	k: 2313502	n:2540000
KS ci ratio: 1.385927e+00	ci left: 1.108018e-06	ci right 5.678210e-06	k: 7	n:2540000
IL32   2540000 perm   2869 sec   (885 perm/sec)   p_kst 2.755906e-06   p_cons 9.108276e-01   p_joint 2.677165e-05

Joint ci ratio: 4.685231e-01	ci left: 2.105344e-05	ci right 3.424455e-05	k: 69	n:2550000
Cons ci ratio: 7.681362e-04	ci left: 9.104680e-01	ci right 9.111680e-01	k: 2322587	n:2550000
KS ci ratio: 1.385927e+00	ci left: 1.103672e-06	ci right 5.655943e-06	k: 7	n:2550000
IL32   2550000 perm   2890 sec   (882 perm/sec)   p_kst 2.745098e-06   p_cons 9.108184e-01   p_joint 2.705882e-05

Joint ci ratio: 4.685231e-01	ci left: 2.097120e-05	ci right 3.411078e-05	k: 69	n:2560000
Cons ci ratio: 7.665389e-04	ci left: 9.104889e-01	ci right 9.111875e-01	k: 2331747	n:2560000
KS ci ratio: 1.385927e+00	ci left: 1.099361e-06	ci right 5.633849e-06	k: 7	n:2560000
IL32   2560000 perm   2911 sec   (879 perm/sec)   p_kst 2.734375e-06   p_cons 9.108387e-01   p_joint 2.695312e-05

Joint ci ratio: 4.652119e-01	ci left: 2.123291e-05	ci right 3.441263e-05	k: 70	n:2570000
Cons ci ratio: 7.651495e-04	ci left: 9.104676e-01	ci right 9.111649e-01	k: 2340799	n:2570000
KS ci ratio: 1.385927e+00	ci left: 1.095084e-06	ci right 5.611928e-06	k: 7	n:2570000
IL32   2570000 perm   2932 sec   (876 perm/sec)   p_kst 2.723735e-06   p_cons 9.108167e-01   p_joint 2.723735e-05

Joint ci ratio: 4.938675e-01	ci left: 1.842448e-05	ci right 3.080656e-05	k: 62	n:2580000
Cons ci ratio: 7.636546e-04	ci left: 9.104706e-01	ci right 9.111665e-01	k: 2349913	n:2580000
KS ci ratio: 1.385927e+00	ci left: 1.090839e-06	ci right 5.590176e-06	k: 7	n:2580000
IL32   2580000 perm   2953 sec   (874 perm/sec)   p_kst 2.713178e-06   p_cons 9.108190e-01   p_joint 2.403101e-05

Joint ci ratio: 4.938675e-01	ci left: 1.835335e-05	ci right 3.068762e-05	k: 62	n:2590000
Cons ci ratio: 7.621448e-04	ci left: 9.104785e-01	ci right 9.111731e-01	k: 2359040	n:2590000
KS ci ratio: 1.385927e+00	ci left: 1.086627e-06	ci right 5.568593e-06	k: 7	n:2590000
IL32   2590000 perm   2974 sec   (871 perm/sec)   p_kst 2.702703e-06   p_cons 9.108263e-01   p_joint 2.393822e-05

Joint ci ratio: 5.018986e-01	ci left: 1.761017e-05	ci right 2.970448e-05	k: 60	n:2600000
Cons ci ratio: 7.606908e-04	ci left: 9.104764e-01	ci right 9.111696e-01	k: 2368141	n:2600000
KS ci ratio: 1.385927e+00	ci left: 1.082448e-06	ci right 5.547175e-06	k: 7	n:2600000
IL32   2600000 perm   2995 sec   (868 perm/sec)   p_kst 2.692308e-06   p_cons 9.108235e-01   p_joint 2.307692e-05

Joint ci ratio: 4.978345e-01	ci left: 1.787750e-05	ci right 3.002176e-05	k: 61	n:2610000
Cons ci ratio: 7.591950e-04	ci left: 9.104850e-01	ci right 9.111769e-01	k: 2377270	n:2610000
KS ci ratio: 1.385927e+00	ci left: 1.078301e-06	ci right 5.525921e-06	k: 7	n:2610000
IL32   2610000 perm   3016 sec   (865 perm/sec)   p_kst 2.681992e-06   p_cons 9.108314e-01   p_joint 2.337165e-05

Joint ci ratio: 4.938675e-01	ci left: 1.814319e-05	ci right 3.033624e-05	k: 62	n:2620000
Cons ci ratio: 7.577863e-04	ci left: 9.104768e-01	ci right 9.111674e-01	k: 2386355	n:2620000
KS ci ratio: 1.385927e+00	ci left: 1.074185e-06	ci right 5.504830e-06	k: 7	n:2620000
IL32   2620000 perm   3037 sec   (863 perm/sec)   p_kst 2.671756e-06   p_cons 9.108225e-01   p_joint 2.366412e-05

Joint ci ratio: 5.018987e-01	ci left: 1.740929e-05	ci right 2.936564e-05	k: 60	n:2630000
Cons ci ratio: 7.563517e-04	ci left: 9.104758e-01	ci right 9.111651e-01	k: 2395459	n:2630000
KS ci ratio: 1.385927e+00	ci left: 1.070101e-06	ci right 5.483899e-06	k: 7	n:2630000
IL32   2630000 perm   3059 sec   (860 perm/sec)   p_kst 2.661597e-06   p_cons 9.108209e-01   p_joint 2.281369e-05

Joint ci ratio: 4.978346e-01	ci left: 1.767435e-05	ci right 2.968060e-05	k: 61	n:2640000
Cons ci ratio: 7.548813e-04	ci left: 9.104844e-01	ci right 9.111723e-01	k: 2404588	n:2640000
KS ci ratio: 1.306664e+00	ci left: 1.308271e-06	ci right 5.970896e-06	k: 8	n:2640000
IL32   2640000 perm   3080 sec   (857 perm/sec)   p_kst 3.030303e-06   p_cons 9.108288e-01   p_joint 2.310606e-05

Joint ci ratio: 4.978346e-01	ci left: 1.760765e-05	ci right 2.956860e-05	k: 61	n:2650000
Cons ci ratio: 7.534159e-04	ci left: 9.104936e-01	ci right 9.111802e-01	k: 2413719	n:2650000
KS ci ratio: 1.306664e+00	ci left: 1.303334e-06	ci right 5.948365e-06	k: 8	n:2650000
IL32   2650000 perm   3102 sec   (854 perm/sec)   p_kst 3.018868e-06   p_cons 9.108374e-01   p_joint 2.301887e-05

Joint ci ratio: 4.978346e-01	ci left: 1.754146e-05	ci right 2.945744e-05	k: 61	n:2660000
Cons ci ratio: 7.520042e-04	ci left: 9.104930e-01	ci right 9.111783e-01	k: 2422824	n:2660000
KS ci ratio: 1.306664e+00	ci left: 1.298434e-06	ci right 5.926002e-06	k: 8	n:2660000
IL32   2660000 perm   3123 sec   (852 perm/sec)   p_kst 3.007519e-06   p_cons 9.108361e-01   p_joint 2.293233e-05

Joint ci ratio: 4.978346e-01	ci left: 1.747576e-05	ci right 2.934712e-05	k: 61	n:2670000
Cons ci ratio: 7.505831e-04	ci left: 9.104961e-01	ci right 9.111801e-01	k: 2431939	n:2670000
KS ci ratio: 1.306664e+00	ci left: 1.293571e-06	ci right 5.903808e-06	k: 8	n:2670000
IL32   2670000 perm   3144 sec   (849 perm/sec)   p_kst 2.996255e-06   p_cons 9.108386e-01   p_joint 2.284644e-05

Joint ci ratio: 4.978346e-01	ci left: 1.741055e-05	ci right 2.923761e-05	k: 61	n:2680000
Cons ci ratio: 7.492097e-04	ci left: 9.104906e-01	ci right 9.111734e-01	k: 2441031	n:2680000
KS ci ratio: 1.306664e+00	ci left: 1.288744e-06	ci right 5.881779e-06	k: 8	n:2680000
IL32   2680000 perm   3166 sec   (846 perm/sec)   p_kst 2.985075e-06   p_cons 9.108325e-01   p_joint 2.276119e-05

Joint ci ratio: 4.938677e-01	ci left: 1.767106e-05	ci right 2.954682e-05	k: 62	n:2690000
Cons ci ratio: 7.477616e-04	ci left: 9.105031e-01	ci right 9.111845e-01	k: 2450171	n:2690000
KS ci ratio: 1.306664e+00	ci left: 1.283953e-06	ci right 5.859913e-06	k: 8	n:2690000
IL32   2690000 perm   3189 sec   (844 perm/sec)   p_kst 2.973978e-06   p_cons 9.108442e-01   p_joint 2.304833e-05

Joint ci ratio: 4.938677e-01	ci left: 1.760562e-05	ci right 2.943739e-05	k: 62	n:2700000
Cons ci ratio: 7.464852e-04	ci left: 9.104798e-01	ci right 9.111601e-01	k: 2459215	n:2700000
KS ci ratio: 1.306664e+00	ci left: 1.279198e-06	ci right 5.838210e-06	k: 8	n:2700000
IL32   2700000 perm   3212 sec   (841 perm/sec)   p_kst 2.962963e-06   p_cons 9.108204e-01   p_joint 2.296296e-05

Joint ci ratio: 4.899941e-01	ci left: 1.786386e-05	ci right 2.974321e-05	k: 63	n:2710000
Cons ci ratio: 7.451493e-04	ci left: 9.104711e-01	ci right 9.111502e-01	k: 2468298	n:2710000
KS ci ratio: 1.306664e+00	ci left: 1.274478e-06	ci right 5.816667e-06	k: 8	n:2710000
IL32   2710000 perm   3234 sec   (838 perm/sec)   p_kst 2.952030e-06   p_cons 9.108111e-01   p_joint 2.324723e-05

Joint ci ratio: 5.103349e-01	ci left: 1.619189e-05	ci right 2.756552e-05	k: 58	n:2720000
Cons ci ratio: 7.437297e-04	ci left: 9.104824e-01	ci right 9.111601e-01	k: 2477435	n:2720000
KS ci ratio: 1.306664e+00	ci left: 1.269792e-06	ci right 5.795282e-06	k: 8	n:2720000
IL32   2720000 perm   3256 sec   (835 perm/sec)   p_kst 2.941176e-06   p_cons 9.108217e-01   p_joint 2.132353e-05

Joint ci ratio: 5.103349e-01	ci left: 1.613258e-05	ci right 2.746455e-05	k: 58	n:2730000
Cons ci ratio: 7.423600e-04	ci left: 9.104844e-01	ci right 9.111609e-01	k: 2486547	n:2730000
KS ci ratio: 1.306664e+00	ci left: 1.265141e-06	ci right 5.774054e-06	k: 8	n:2730000
IL32   2730000 perm   3278 sec   (833 perm/sec)   p_kst 2.930403e-06   p_cons 9.108231e-01   p_joint 2.124542e-05

Joint ci ratio: 5.060642e-01	ci left: 1.639184e-05	ci right 2.777572e-05	k: 59	n:2740000
Cons ci ratio: 7.409595e-04	ci left: 9.104948e-01	ci right 9.111700e-01	k: 2495682	n:2740000
KS ci ratio: 1.306664e+00	ci left: 1.260524e-06	ci right 5.752981e-06	k: 8	n:2740000
IL32   2740000 perm   3301 sec   (830 perm/sec)   p_kst 2.919708e-06   p_cons 9.108328e-01   p_joint 2.153285e-05

Joint ci ratio: 5.060642e-01	ci left: 1.633223e-05	ci right 2.767471e-05	k: 59	n:2750000
Cons ci ratio: 7.395586e-04	ci left: 9.105069e-01	ci right 9.111809e-01	k: 2504822	n:2750000
KS ci ratio: 1.306664e+00	ci left: 1.255940e-06	ci right 5.732061e-06	k: 8	n:2750000
IL32   2750000 perm   3323 sec   (827 perm/sec)   p_kst 2.909091e-06   p_cons 9.108444e-01   p_joint 2.145455e-05

Joint ci ratio: 5.060642e-01	ci left: 1.627306e-05	ci right 2.757444e-05	k: 59	n:2760000
Cons ci ratio: 7.381492e-04	ci left: 9.105226e-01	ci right 9.111953e-01	k: 2513972	n:2760000
KS ci ratio: 1.306664e+00	ci left: 1.251389e-06	ci right 5.711292e-06	k: 8	n:2760000
IL32   2760000 perm   3346 sec   (825 perm/sec)   p_kst 2.898551e-06   p_cons 9.108594e-01   p_joint 2.137681e-05

Joint ci ratio: 5.060643e-01	ci left: 1.621431e-05	ci right 2.747490e-05	k: 59	n:2770000
Cons ci ratio: 7.368329e-04	ci left: 9.105194e-01	ci right 9.111909e-01	k: 2523070	n:2770000
KS ci ratio: 1.306664e+00	ci left: 1.246872e-06	ci right 5.690674e-06	k: 8	n:2770000
IL32   2770000 perm   3368 sec   (822 perm/sec)   p_kst 2.888087e-06   p_cons 9.108556e-01   p_joint 2.129964e-05

Joint ci ratio: 5.018990e-01	ci left: 1.646994e-05	ci right 2.778117e-05	k: 60	n:2780000
Cons ci ratio: 7.354732e-04	ci left: 9.105274e-01	ci right 9.111977e-01	k: 2532199	n:2780000
KS ci ratio: 1.239610e+00	ci left: 1.480351e-06	ci right 6.145604e-06	k: 9	n:2780000
IL32   2780000 perm   3391 sec   (820 perm/sec)   p_kst 3.237410e-06   p_cons 9.108629e-01   p_joint 2.158273e-05

Joint ci ratio: 5.018990e-01	ci left: 1.641091e-05	ci right 2.768160e-05	k: 60	n:2790000
Cons ci ratio: 7.341614e-04	ci left: 9.105263e-01	ci right 9.111954e-01	k: 2541303	n:2790000
KS ci ratio: 1.239610e+00	ci left: 1.475045e-06	ci right 6.123577e-06	k: 9	n:2790000
IL32   2790000 perm   3413 sec   (817 perm/sec)   p_kst 3.225806e-06   p_cons 9.108613e-01   p_joint 2.150538e-05

Joint ci ratio: 5.018990e-01	ci left: 1.635230e-05	ci right 2.758273e-05	k: 60	n:2800000
Cons ci ratio: 7.328148e-04	ci left: 9.105346e-01	ci right 9.112024e-01	k: 2550433	n:2800000
KS ci ratio: 1.239610e+00	ci left: 1.469777e-06	ci right 6.101707e-06	k: 9	n:2800000
IL32   2800000 perm   3436 sec   (815 perm/sec)   p_kst 3.214286e-06   p_cons 9.108689e-01   p_joint 2.142857e-05

Joint ci ratio: 5.018990e-01	ci left: 1.629410e-05	ci right 2.748458e-05	k: 60	n:2810000
Cons ci ratio: 7.315044e-04	ci left: 9.105364e-01	ci right 9.112030e-01	k: 2559545	n:2810000
KS ci ratio: 1.239610e+00	ci left: 1.464547e-06	ci right 6.079992e-06	k: 9	n:2810000
IL32   2810000 perm   3459 sec   (812 perm/sec)   p_kst 3.202847e-06   p_cons 9.108701e-01   p_joint 2.135231e-05

Joint ci ratio: 5.018991e-01	ci left: 1.623632e-05	ci right 2.738711e-05	k: 60	n:2820000
Cons ci ratio: 7.301037e-04	ci left: 9.105598e-01	ci right 9.112252e-01	k: 2568718	n:2820000
KS ci ratio: 1.239610e+00	ci left: 1.459353e-06	ci right 6.058432e-06	k: 9	n:2820000
IL32   2820000 perm   3482 sec   (810 perm/sec)   p_kst 3.191489e-06   p_cons 9.108929e-01   p_joint 2.127660e-05

Joint ci ratio: 5.018991e-01	ci left: 1.617895e-05	ci right 2.729034e-05	k: 60	n:2830000
Cons ci ratio: 7.288236e-04	ci left: 9.105579e-01	ci right 9.112221e-01	k: 2577820	n:2830000
KS ci ratio: 1.239610e+00	ci left: 1.454196e-06	ci right 6.037024e-06	k: 9	n:2830000
IL32   2830000 perm   3505 sec   (807 perm/sec)   p_kst 3.180212e-06   p_cons 9.108905e-01   p_joint 2.120141e-05

Joint ci ratio: 5.018991e-01	ci left: 1.612198e-05	ci right 2.719425e-05	k: 60	n:2840000
Cons ci ratio: 7.275549e-04	ci left: 9.105550e-01	ci right 9.112181e-01	k: 2586919	n:2840000
KS ci ratio: 1.239610e+00	ci left: 1.449076e-06	ci right 6.015767e-06	k: 9	n:2840000
IL32   2840000 perm   3528 sec   (805 perm/sec)   p_kst 3.169014e-06   p_cons 9.108870e-01   p_joint 2.112676e-05

Joint ci ratio: 5.018991e-01	ci left: 1.606541e-05	ci right 2.709883e-05	k: 60	n:2850000
Cons ci ratio: 7.263212e-04	ci left: 9.105458e-01	ci right 9.112077e-01	k: 2596000	n:2850000
KS ci ratio: 1.239610e+00	ci left: 1.443992e-06	ci right 5.994659e-06	k: 9	n:2850000
IL32   2850000 perm   3551 sec   (803 perm/sec)   p_kst 3.157895e-06   p_cons 9.108772e-01   p_joint 2.105263e-05

Joint ci ratio: 5.018991e-01	ci left: 1.600924e-05	ci right 2.700408e-05	k: 60	n:2860000
Cons ci ratio: 7.250046e-04	ci left: 9.105566e-01	ci right 9.112174e-01	k: 2605138	n:2860000
KS ci ratio: 1.239610e+00	ci left: 1.438943e-06	ci right 5.973699e-06	k: 9	n:2860000
IL32   2860000 perm   3575 sec   (800 perm/sec)   p_kst 3.146853e-06   p_cons 9.108874e-01   p_joint 2.097902e-05

Joint ci ratio: 5.018991e-01	ci left: 1.595346e-05	ci right 2.690999e-05	k: 60	n:2870000
Cons ci ratio: 7.237480e-04	ci left: 9.105555e-01	ci right 9.112151e-01	k: 2614242	n:2870000
KS ci ratio: 1.239610e+00	ci left: 1.433929e-06	ci right 5.952885e-06	k: 9	n:2870000
IL32   2870000 perm   3599 sec   (797 perm/sec)   p_kst 3.135889e-06   p_cons 9.108857e-01   p_joint 2.090592e-05

Joint ci ratio: 5.018992e-01	ci left: 1.589806e-05	ci right 2.681655e-05	k: 60	n:2880000
Cons ci ratio: 7.224546e-04	ci left: 9.105641e-01	ci right 9.112225e-01	k: 2623374	n:2880000
KS ci ratio: 1.239610e+00	ci left: 1.428950e-06	ci right 5.932215e-06	k: 9	n:2880000
IL32   2880000 perm   3623 sec   (795 perm/sec)   p_kst 3.125000e-06   p_cons 9.108937e-01   p_joint 2.083333e-05

Joint ci ratio: 5.018992e-01	ci left: 1.584305e-05	ci right 2.672376e-05	k: 60	n:2890000
Cons ci ratio: 7.212297e-04	ci left: 9.105588e-01	ci right 9.112161e-01	k: 2632466	n:2890000
KS ci ratio: 1.239610e+00	ci left: 1.424005e-06	ci right 5.911688e-06	k: 9	n:2890000
IL32   2890000 perm   3647 sec   (792 perm/sec)   p_kst 3.114187e-06   p_cons 9.108879e-01   p_joint 2.076125e-05

Joint ci ratio: 5.018992e-01	ci left: 1.578842e-05	ci right 2.663161e-05	k: 60	n:2900000
Cons ci ratio: 7.199681e-04	ci left: 9.105632e-01	ci right 9.112194e-01	k: 2641586	n:2900000
KS ci ratio: 1.239610e+00	ci left: 1.419095e-06	ci right 5.891303e-06	k: 9	n:2900000
IL32   2900000 perm   3671 sec   (790 perm/sec)   p_kst 3.103448e-06   p_cons 9.108917e-01   p_joint 2.068966e-05

Joint ci ratio: 5.018992e-01	ci left: 1.573417e-05	ci right 2.654009e-05	k: 60	n:2910000
Cons ci ratio: 7.187405e-04	ci left: 9.105614e-01	ci right 9.112165e-01	k: 2650688	n:2910000
KS ci ratio: 1.239610e+00	ci left: 1.414219e-06	ci right 5.871058e-06	k: 9	n:2910000
IL32   2910000 perm   3695 sec   (788 perm/sec)   p_kst 3.092784e-06   p_cons 9.108893e-01   p_joint 2.061856e-05

Joint ci ratio: 4.978351e-01	ci left: 1.597955e-05	ci right 2.683453e-05	k: 61	n:2920000
Cons ci ratio: 7.175252e-04	ci left: 9.105583e-01	ci right 9.112122e-01	k: 2659786	n:2920000
KS ci ratio: 1.239611e+00	ci left: 1.409375e-06	ci right 5.850952e-06	k: 9	n:2920000
IL32   2920000 perm   3719 sec   (785 perm/sec)   p_kst 3.082192e-06   p_cons 9.108856e-01   p_joint 2.089041e-05

Joint ci ratio: 4.978351e-01	ci left: 1.592501e-05	ci right 2.674294e-05	k: 61	n:2930000
Cons ci ratio: 7.162694e-04	ci left: 9.105657e-01	ci right 9.112185e-01	k: 2668915	n:2930000
KS ci ratio: 1.239611e+00	ci left: 1.404565e-06	ci right 5.830983e-06	k: 9	n:2930000
IL32   2930000 perm   3743 sec   (783 perm/sec)   p_kst 3.071672e-06   p_cons 9.108925e-01   p_joint 2.081911e-05

Joint ci ratio: 4.978352e-01	ci left: 1.587084e-05	ci right 2.665198e-05	k: 61	n:2940000
Cons ci ratio: 7.150785e-04	ci left: 9.105598e-01	ci right 9.112115e-01	k: 2678005	n:2940000
KS ci ratio: 1.239611e+00	ci left: 1.399788e-06	ci right 5.811150e-06	k: 9	n:2940000
IL32   2940000 perm   3767 sec   (780 perm/sec)   p_kst 3.061224e-06   p_cons 9.108861e-01   p_joint 2.074830e-05

Joint ci ratio: 4.978352e-01	ci left: 1.581704e-05	ci right 2.656163e-05	k: 61	n:2950000
Cons ci ratio: 7.138802e-04	ci left: 9.105570e-01	ci right 9.112076e-01	k: 2687104	n:2950000
KS ci ratio: 1.239611e+00	ci left: 1.395043e-06	ci right 5.791451e-06	k: 9	n:2950000
IL32   2950000 perm   3791 sec   (778 perm/sec)   p_kst 3.050847e-06   p_cons 9.108827e-01   p_joint 2.067797e-05

Joint ci ratio: 4.978352e-01	ci left: 1.576361e-05	ci right 2.647190e-05	k: 61	n:2960000
Cons ci ratio: 7.126745e-04	ci left: 9.105573e-01	ci right 9.112068e-01	k: 2696212	n:2960000
KS ci ratio: 1.239611e+00	ci left: 1.390330e-06	ci right 5.771885e-06	k: 9	n:2960000
IL32   2960000 perm   3815 sec   (776 perm/sec)   p_kst 3.040541e-06   p_cons 9.108824e-01   p_joint 2.060811e-05

Joint ci ratio: 4.978352e-01	ci left: 1.571053e-05	ci right 2.638277e-05	k: 61	n:2970000
Cons ci ratio: 7.114395e-04	ci left: 9.105657e-01	ci right 9.112140e-01	k: 2705344	n:2970000
KS ci ratio: 1.239611e+00	ci left: 1.385648e-06	ci right 5.752451e-06	k: 9	n:2970000
IL32   2970000 perm   3839 sec   (774 perm/sec)   p_kst 3.030303e-06   p_cons 9.108902e-01   p_joint 2.053872e-05

Joint ci ratio: 4.978352e-01	ci left: 1.565781e-05	ci right 2.629424e-05	k: 61	n:2980000
Cons ci ratio: 7.101860e-04	ci left: 9.105797e-01	ci right 9.112269e-01	k: 2714493	n:2980000
KS ci ratio: 1.239611e+00	ci left: 1.380999e-06	ci right 5.733148e-06	k: 9	n:2980000
IL32   2980000 perm   3863 sec   (771 perm/sec)   p_kst 3.020134e-06   p_cons 9.109037e-01   p_joint 2.046980e-05

Joint ci ratio: 4.978353e-01	ci left: 1.560544e-05	ci right 2.620630e-05	k: 61	n:2990000
Cons ci ratio: 7.091216e-04	ci left: 9.105517e-01	ci right 9.111980e-01	k: 2723517	n:2990000
KS ci ratio: 1.239611e+00	ci left: 1.376380e-06	ci right 5.713973e-06	k: 9	n:2990000
IL32   2990000 perm   3887 sec   (769 perm/sec)   p_kst 3.010033e-06   p_cons 9.108753e-01   p_joint 2.040134e-05

Joint ci ratio: 4.978353e-01	ci left: 1.555342e-05	ci right 2.611894e-05	k: 61	n:3000000
Cons ci ratio: 7.079587e-04	ci left: 9.105477e-01	ci right 9.111929e-01	k: 2732612	n:3000000
KS ci ratio: 1.239611e+00	ci left: 1.371792e-06	ci right 5.694927e-06	k: 9	n:3000000
IL32   3000000 perm   3912 sec   (767 perm/sec)   p_kst 3.000000e-06   p_cons 9.108707e-01   p_joint 2.033333e-05

Joint ci ratio: 4.978353e-01	ci left: 1.550175e-05	ci right 2.603217e-05	k: 61	n:3010000
Cons ci ratio: 7.067538e-04	ci left: 9.105546e-01	ci right 9.111987e-01	k: 2741740	n:3010000
KS ci ratio: 1.239611e+00	ci left: 1.367234e-06	ci right 5.676007e-06	k: 9	n:3010000
IL32   3010000 perm   3937 sec   (765 perm/sec)   p_kst 2.990033e-06   p_cons 9.108771e-01   p_joint 2.026578e-05

Joint ci ratio: 4.978353e-01	ci left: 1.545042e-05	ci right 2.594597e-05	k: 61	n:3020000
Cons ci ratio: 7.056040e-04	ci left: 9.105503e-01	ci right 9.111933e-01	k: 2750834	n:3020000
KS ci ratio: 1.239611e+00	ci left: 1.362707e-06	ci right 5.657212e-06	k: 9	n:3020000
IL32   3020000 perm   3961 sec   (762 perm/sec)   p_kst 2.980132e-06   p_cons 9.108722e-01   p_joint 2.019868e-05

Joint ci ratio: 4.978353e-01	ci left: 1.539943e-05	ci right 2.586034e-05	k: 61	n:3030000
Cons ci ratio: 7.043709e-04	ci left: 9.105664e-01	ci right 9.112084e-01	k: 2759990	n:3030000
KS ci ratio: 1.239611e+00	ci left: 1.358210e-06	ci right 5.638541e-06	k: 9	n:3030000
IL32   3030000 perm   3985 sec   (760 perm/sec)   p_kst 2.970297e-06   p_cons 9.108878e-01   p_joint 2.013201e-05

Joint ci ratio: 4.978353e-01	ci left: 1.534877e-05	ci right 2.577527e-05	k: 61	n:3040000
Cons ci ratio: 7.032526e-04	ci left: 9.105575e-01	ci right 9.111983e-01	k: 2769070	n:3040000
KS ci ratio: 1.239611e+00	ci left: 1.353742e-06	ci right 5.619994e-06	k: 9	n:3040000
IL32   3040000 perm   4010 sec   (758 perm/sec)   p_kst 2.960526e-06   p_cons 9.108783e-01   p_joint 2.006579e-05

Joint ci ratio: 4.978354e-01	ci left: 1.529845e-05	ci right 2.569076e-05	k: 61	n:3050000
Cons ci ratio: 7.021141e-04	ci left: 9.105544e-01	ci right 9.111943e-01	k: 2778168	n:3050000
KS ci ratio: 1.239611e+00	ci left: 1.349304e-06	ci right 5.601567e-06	k: 9	n:3050000
IL32   3050000 perm   4035 sec   (756 perm/sec)   p_kst 2.950820e-06   p_cons 9.108748e-01   p_joint 2.000000e-05

Joint ci ratio: 4.978354e-01	ci left: 1.524845e-05	ci right 2.560681e-05	k: 61	n:3060000
Cons ci ratio: 7.009613e-04	ci left: 9.105560e-01	ci right 9.111948e-01	k: 2787280	n:3060000
KS ci ratio: 1.239611e+00	ci left: 1.344894e-06	ci right 5.583262e-06	k: 9	n:3060000
IL32   3060000 perm   4060 sec   (754 perm/sec)   p_kst 2.941176e-06   p_cons 9.108758e-01   p_joint 1.993464e-05

Joint ci ratio: 4.938684e-01	ci left: 1.548376e-05	ci right 2.588957e-05	k: 62	n:3070000
Cons ci ratio: 6.997777e-04	ci left: 9.105661e-01	ci right 9.112038e-01	k: 2796418	n:3070000
KS ci ratio: 1.239611e+00	ci left: 1.340513e-06	ci right 5.565075e-06	k: 9	n:3070000
IL32   3070000 perm   4085 sec   (751 perm/sec)   p_kst 2.931596e-06   p_cons 9.108853e-01   p_joint 2.019544e-05

Joint ci ratio: 4.938684e-01	ci left: 1.543349e-05	ci right 2.580551e-05	k: 62	n:3080000
Cons ci ratio: 6.986783e-04	ci left: 9.105579e-01	ci right 9.111946e-01	k: 2805500	n:3080000
KS ci ratio: 1.239611e+00	ci left: 1.336161e-06	ci right 5.547007e-06	k: 9	n:3080000
IL32   3080000 perm   4111 sec   (749 perm/sec)   p_kst 2.922078e-06   p_cons 9.108766e-01   p_joint 2.012987e-05

Joint ci ratio: 4.899948e-01	ci left: 1.566700e-05	ci right 2.608548e-05	k: 63	n:3090000
Cons ci ratio: 6.975632e-04	ci left: 9.105546e-01	ci right 9.111903e-01	k: 2814597	n:3090000
KS ci ratio: 1.239611e+00	ci left: 1.331837e-06	ci right 5.529055e-06	k: 9	n:3090000
IL32   3090000 perm   4137 sec   (747 perm/sec)   p_kst 2.912621e-06   p_cons 9.108728e-01   p_joint 2.038835e-05

Joint ci ratio: 4.899949e-01	ci left: 1.561646e-05	ci right 2.600133e-05	k: 63	n:3100000
Cons ci ratio: 6.964257e-04	ci left: 9.105578e-01	ci right 9.111924e-01	k: 2823714	n:3100000
KS ci ratio: 1.239611e+00	ci left: 1.327541e-06	ci right 5.511220e-06	k: 9	n:3100000
IL32   3100000 perm   4162 sec   (745 perm/sec)   p_kst 2.903226e-06   p_cons 9.108755e-01   p_joint 2.032258e-05

Joint ci ratio: 4.899949e-01	ci left: 1.556625e-05	ci right 2.591773e-05	k: 63	n:3110000
Cons ci ratio: 6.953241e-04	ci left: 9.105538e-01	ci right 9.111875e-01	k: 2832809	n:3110000
KS ci ratio: 1.239611e+00	ci left: 1.323272e-06	ci right 5.493499e-06	k: 9	n:3110000
IL32   3110000 perm   4188 sec   (743 perm/sec)   p_kst 2.893891e-06   p_cons 9.108711e-01   p_joint 2.025723e-05

Joint ci ratio: 4.899949e-01	ci left: 1.551636e-05	ci right 2.583466e-05	k: 63	n:3120000
Cons ci ratio: 6.941934e-04	ci left: 9.105580e-01	ci right 9.111906e-01	k: 2841929	n:3120000
KS ci ratio: 1.239611e+00	ci left: 1.319031e-06	ci right 5.475891e-06	k: 9	n:3120000
IL32   3120000 perm   4213 sec   (741 perm/sec)   p_kst 2.884615e-06   p_cons 9.108747e-01   p_joint 2.019231e-05

Joint ci ratio: 4.899949e-01	ci left: 1.546678e-05	ci right 2.575212e-05	k: 63	n:3130000
Cons ci ratio: 6.930246e-04	ci left: 9.105723e-01	ci right 9.112039e-01	k: 2851081	n:3130000
KS ci ratio: 1.239611e+00	ci left: 1.314817e-06	ci right 5.458397e-06	k: 9	n:3130000
IL32   3130000 perm   4239 sec   (738 perm/sec)   p_kst 2.875399e-06   p_cons 9.108885e-01   p_joint 2.012780e-05

Joint ci ratio: 4.899949e-01	ci left: 1.541753e-05	ci right 2.567011e-05	k: 63	n:3140000
Cons ci ratio: 6.919635e-04	ci left: 9.105627e-01	ci right 9.111933e-01	k: 2860158	n:3140000
KS ci ratio: 1.239611e+00	ci left: 1.310629e-06	ci right 5.441013e-06	k: 9	n:3140000
IL32   3140000 perm   4265 sec   (736 perm/sec)   p_kst 2.866242e-06   p_cons 9.108783e-01   p_joint 2.006369e-05

Joint ci ratio: 4.825135e-01	ci left: 1.592563e-05	ci right 2.630083e-05	k: 65	n:3150000
Cons ci ratio: 6.908518e-04	ci left: 9.105661e-01	ci right 9.111957e-01	k: 2869276	n:3150000
KS ci ratio: 1.239611e+00	ci left: 1.306468e-06	ci right 5.423740e-06	k: 9	n:3150000
IL32   3150000 perm   4292 sec   (734 perm/sec)   p_kst 2.857143e-06   p_cons 9.108813e-01   p_joint 2.063492e-05

Joint ci ratio: 4.825135e-01	ci left: 1.587523e-05	ci right 2.621760e-05	k: 65	n:3160000
Cons ci ratio: 6.897602e-04	ci left: 9.105660e-01	ci right 9.111946e-01	k: 2878383	n:3160000
KS ci ratio: 1.239611e+00	ci left: 1.302334e-06	ci right 5.406576e-06	k: 9	n:3160000
IL32   3160000 perm   4318 sec   (732 perm/sec)   p_kst 2.848101e-06   p_cons 9.108807e-01   p_joint 2.056962e-05

Joint ci ratio: 4.825135e-01	ci left: 1.582515e-05	ci right 2.613489e-05	k: 65	n:3170000
Cons ci ratio: 6.886765e-04	ci left: 9.105653e-01	ci right 9.111929e-01	k: 2887488	n:3170000
KS ci ratio: 1.239611e+00	ci left: 1.298226e-06	ci right 5.389521e-06	k: 9	n:3170000
IL32   3170000 perm   4344 sec   (730 perm/sec)   p_kst 2.839117e-06   p_cons 9.108795e-01   p_joint 2.050473e-05

Joint ci ratio: 4.788991e-01	ci left: 1.605173e-05	ci right 2.640501e-05	k: 66	n:3180000
Cons ci ratio: 6.875406e-04	ci left: 9.105782e-01	ci right 9.112047e-01	k: 2896636	n:3180000
KS ci ratio: 1.239611e+00	ci left: 1.294143e-06	ci right 5.372573e-06	k: 9	n:3180000
IL32   3180000 perm   4370 sec   (728 perm/sec)   p_kst 2.830189e-06   p_cons 9.108918e-01   p_joint 2.075472e-05

Joint ci ratio: 4.788991e-01	ci left: 1.600141e-05	ci right 2.632224e-05	k: 66	n:3190000
Cons ci ratio: 6.864315e-04	ci left: 9.105859e-01	ci right 9.112115e-01	k: 2905768	n:3190000
KS ci ratio: 1.239611e+00	ci left: 1.290086e-06	ci right 5.355731e-06	k: 9	n:3190000
IL32   3190000 perm   4396 sec   (726 perm/sec)   p_kst 2.821317e-06   p_cons 9.108991e-01   p_joint 2.068966e-05

Joint ci ratio: 4.788991e-01	ci left: 1.595141e-05	ci right 2.623998e-05	k: 66	n:3200000
Cons ci ratio: 6.853581e-04	ci left: 9.105864e-01	ci right 9.112110e-01	k: 2914877	n:3200000
KS ci ratio: 1.239611e+00	ci left: 1.286055e-06	ci right 5.338994e-06	k: 9	n:3200000
IL32   3200000 perm   4422 sec   (724 perm/sec)   p_kst 2.812500e-06   p_cons 9.108991e-01   p_joint 2.062500e-05

Joint ci ratio: 4.788991e-01	ci left: 1.590172e-05	ci right 2.615824e-05	k: 66	n:3210000
Cons ci ratio: 6.842004e-04	ci left: 9.106081e-01	ci right 9.112317e-01	k: 2924054	n:3210000
KS ci ratio: 1.239611e+00	ci left: 1.282048e-06	ci right 5.322362e-06	k: 9	n:3210000
IL32   3210000 perm   4449 sec   (722 perm/sec)   p_kst 2.803738e-06   p_cons 9.109202e-01   p_joint 2.056075e-05

Joint ci ratio: 4.788992e-01	ci left: 1.585233e-05	ci right 2.607700e-05	k: 66	n:3220000
Cons ci ratio: 6.831309e-04	ci left: 9.106101e-01	ci right 9.112327e-01	k: 2933168	n:3220000
KS ci ratio: 1.239611e+00	ci left: 1.278067e-06	ci right 5.305833e-06	k: 9	n:3220000
IL32   3220000 perm   4476 sec   (719 perm/sec)   p_kst 2.795031e-06   p_cons 9.109217e-01   p_joint 2.049689e-05

Joint ci ratio: 4.788992e-01	ci left: 1.580325e-05	ci right 2.599627e-05	k: 66	n:3230000
Cons ci ratio: 6.820859e-04	ci left: 9.106074e-01	ci right 9.112290e-01	k: 2942267	n:3230000
KS ci ratio: 1.239611e+00	ci left: 1.274110e-06	ci right 5.289406e-06	k: 9	n:3230000
IL32   3230000 perm   4502 sec   (718 perm/sec)   p_kst 2.786378e-06   p_cons 9.109186e-01   p_joint 2.043344e-05

Joint ci ratio: 4.788992e-01	ci left: 1.575448e-05	ci right 2.591603e-05	k: 66	n:3240000
Cons ci ratio: 6.809900e-04	ci left: 9.106180e-01	ci right 9.112387e-01	k: 2951409	n:3240000
KS ci ratio: 1.239611e+00	ci left: 1.270178e-06	ci right 5.273081e-06	k: 9	n:3240000
IL32   3240000 perm   4528 sec   (716 perm/sec)   p_kst 2.777778e-06   p_cons 9.109287e-01   p_joint 2.037037e-05

Joint ci ratio: 4.788992e-01	ci left: 1.570600e-05	ci right 2.583629e-05	k: 66	n:3250000
Cons ci ratio: 6.800373e-04	ci left: 9.105956e-01	ci right 9.112154e-01	k: 2960444	n:3250000
KS ci ratio: 1.239611e+00	ci left: 1.266269e-06	ci right 5.256856e-06	k: 9	n:3250000
IL32   3250000 perm   4554 sec   (714 perm/sec)   p_kst 2.769231e-06   p_cons 9.109058e-01   p_joint 2.030769e-05

Joint ci ratio: 4.788992e-01	ci left: 1.565782e-05	ci right 2.575704e-05	k: 66	n:3260000
Cons ci ratio: 6.790231e-04	ci left: 9.105890e-01	ci right 9.112078e-01	k: 2969530	n:3260000
KS ci ratio: 1.239611e+00	ci left: 1.262385e-06	ci right 5.240731e-06	k: 9	n:3260000
IL32   3260000 perm   4580 sec   (712 perm/sec)   p_kst 2.760736e-06   p_cons 9.108988e-01   p_joint 2.024540e-05

Joint ci ratio: 4.719075e-01	ci left: 1.614825e-05	ci right 2.636268e-05	k: 68	n:3270000
Cons ci ratio: 6.779827e-04	ci left: 9.105898e-01	ci right 9.112077e-01	k: 2978640	n:3270000
KS ci ratio: 1.181922e+00	ci left: 1.466481e-06	ci right 5.623955e-06	k: 10	n:3270000
IL32   3270000 perm   4606 sec   (710 perm/sec)   p_kst 3.058104e-06   p_cons 9.108991e-01   p_joint 2.079511e-05

Joint ci ratio: 4.685245e-01	ci left: 1.636775e-05	ci right 2.662307e-05	k: 69	n:3280000
Cons ci ratio: 6.770018e-04	ci left: 9.105774e-01	ci right 9.111944e-01	k: 2987707	n:3280000
KS ci ratio: 1.181922e+00	ci left: 1.462010e-06	ci right 5.606809e-06	k: 10	n:3280000
IL32   3280000 perm   4632 sec   (708 perm/sec)   p_kst 3.048780e-06   p_cons 9.108863e-01   p_joint 2.103659e-05

Joint ci ratio: 4.685246e-01	ci left: 1.631800e-05	ci right 2.654215e-05	k: 69	n:3290000
Cons ci ratio: 6.759530e-04	ci left: 9.105825e-01	ci right 9.111985e-01	k: 2996831	n:3290000
KS ci ratio: 1.181922e+00	ci left: 1.457566e-06	ci right 5.589767e-06	k: 10	n:3290000
IL32   3290000 perm   4659 sec   (706 perm/sec)   p_kst 3.039514e-06   p_cons 9.108909e-01   p_joint 2.097264e-05

Joint ci ratio: 4.685246e-01	ci left: 1.626856e-05	ci right 2.646172e-05	k: 69	n:3300000
Cons ci ratio: 6.749594e-04	ci left: 9.105754e-01	ci right 9.111905e-01	k: 3005915	n:3300000
KS ci ratio: 1.181922e+00	ci left: 1.453149e-06	ci right 5.572828e-06	k: 10	n:3300000
IL32   3300000 perm   4685 sec   (704 perm/sec)   p_kst 3.030303e-06   p_cons 9.108833e-01   p_joint 2.090909e-05

Joint ci ratio: 4.685246e-01	ci left: 1.621941e-05	ci right 2.638177e-05	k: 69	n:3310000
Cons ci ratio: 6.739577e-04	ci left: 9.105714e-01	ci right 9.111856e-01	k: 3015009	n:3310000
KS ci ratio: 1.181922e+00	ci left: 1.448759e-06	ci right 5.555992e-06	k: 10	n:3310000
IL32   3310000 perm   4712 sec   (703 perm/sec)   p_kst 3.021148e-06   p_cons 9.108789e-01   p_joint 2.084592e-05

Joint ci ratio: 4.652134e-01	ci left: 1.643631e-05	ci right 2.663872e-05	k: 70	n:3320000
Cons ci ratio: 6.729329e-04	ci left: 9.105740e-01	ci right 9.111873e-01	k: 3024125	n:3320000
KS ci ratio: 1.181922e+00	ci left: 1.444395e-06	ci right 5.539257e-06	k: 10	n:3320000
IL32   3320000 perm   4738 sec   (701 perm/sec)   p_kst 3.012048e-06   p_cons 9.108810e-01   p_joint 2.108434e-05

Joint ci ratio: 4.619714e-01	ci left: 1.665217e-05	ci right 2.689387e-05	k: 71	n:3330000
Cons ci ratio: 6.719028e-04	ci left: 9.105791e-01	ci right 9.111914e-01	k: 3033249	n:3330000
KS ci ratio: 1.131604e+00	ci left: 1.648998e-06	ci right 5.910514e-06	k: 11	n:3330000
IL32   3330000 perm   4765 sec   (699 perm/sec)   p_kst 3.303303e-06   p_cons 9.108856e-01   p_joint 2.132132e-05

Joint ci ratio: 4.619714e-01	ci left: 1.660231e-05	ci right 2.681335e-05	k: 71	n:3340000
Cons ci ratio: 6.709282e-04	ci left: 9.105718e-01	ci right 9.111832e-01	k: 3042332	n:3340000
KS ci ratio: 1.131604e+00	ci left: 1.644061e-06	ci right 5.892818e-06	k: 11	n:3340000
IL32   3340000 perm   4791 sec   (697 perm/sec)   p_kst 3.293413e-06   p_cons 9.108778e-01   p_joint 2.125749e-05

Joint ci ratio: 4.619714e-01	ci left: 1.655275e-05	ci right 2.673331e-05	k: 71	n:3350000
Cons ci ratio: 6.699110e-04	ci left: 9.105759e-01	ci right 9.111864e-01	k: 3051453	n:3350000
KS ci ratio: 1.131604e+00	ci left: 1.639153e-06	ci right 5.875228e-06	k: 11	n:3350000
IL32   3350000 perm   4818 sec   (695 perm/sec)   p_kst 3.283582e-06   p_cons 9.108815e-01   p_joint 2.119403e-05

Joint ci ratio: 4.587962e-01	ci left: 1.676657e-05	ci right 2.698566e-05	k: 72	n:3360000
Cons ci ratio: 6.689254e-04	ci left: 9.105734e-01	ci right 9.111830e-01	k: 3060552	n:3360000
KS ci ratio: 1.131604e+00	ci left: 1.634275e-06	ci right 5.857742e-06	k: 11	n:3360000
IL32   3360000 perm   4845 sec   (694 perm/sec)   p_kst 3.273810e-06   p_cons 9.108786e-01   p_joint 2.142857e-05

Joint ci ratio: 4.587963e-01	ci left: 1.671682e-05	ci right 2.690559e-05	k: 72	n:3370000
Cons ci ratio: 6.679246e-04	ci left: 9.105757e-01	ci right 9.111844e-01	k: 3069667	n:3370000
KS ci ratio: 1.131604e+00	ci left: 1.629426e-06	ci right 5.840360e-06	k: 11	n:3370000
IL32   3370000 perm   4872 sec   (692 perm/sec)   p_kst 3.264095e-06   p_cons 9.108804e-01   p_joint 2.136499e-05

Joint ci ratio: 4.587963e-01	ci left: 1.666736e-05	ci right 2.682599e-05	k: 72	n:3380000
Cons ci ratio: 6.669806e-04	ci left: 9.105653e-01	ci right 9.111731e-01	k: 3078739	n:3380000
KS ci ratio: 1.131604e+00	ci left: 1.624605e-06	ci right 5.823081e-06	k: 11	n:3380000
IL32   3380000 perm   4900 sec   (690 perm/sec)   p_kst 3.254438e-06   p_cons 9.108695e-01   p_joint 2.130178e-05

Joint ci ratio: 4.587963e-01	ci left: 1.661820e-05	ci right 2.674685e-05	k: 72	n:3390000
Cons ci ratio: 6.659849e-04	ci left: 9.105685e-01	ci right 9.111754e-01	k: 3087857	n:3390000
KS ci ratio: 1.131604e+00	ci left: 1.619812e-06	ci right 5.805904e-06	k: 11	n:3390000
IL32   3390000 perm   4927 sec   (688 perm/sec)   p_kst 3.244838e-06   p_cons 9.108723e-01   p_joint 2.123894e-05

Joint ci ratio: 4.587963e-01	ci left: 1.656932e-05	ci right 2.666819e-05	k: 72	n:3400000
Cons ci ratio: 6.649647e-04	ci left: 9.105787e-01	ci right 9.111847e-01	k: 3096999	n:3400000
KS ci ratio: 1.131604e+00	ci left: 1.615048e-06	ci right 5.788827e-06	k: 11	n:3400000
IL32   3400000 perm   4955 sec   (686 perm/sec)   p_kst 3.235294e-06   p_cons 9.108821e-01   p_joint 2.117647e-05

Joint ci ratio: 4.556857e-01	ci left: 1.678020e-05	ci right 2.691680e-05	k: 73	n:3410000
Cons ci ratio: 6.639527e-04	ci left: 9.105880e-01	ci right 9.111931e-01	k: 3106138	n:3410000
KS ci ratio: 1.131604e+00	ci left: 1.610312e-06	ci right 5.771851e-06	k: 11	n:3410000
IL32   3410000 perm   4983 sec   (684 perm/sec)   p_kst 3.225806e-06   p_cons 9.108909e-01   p_joint 2.140762e-05

Joint ci ratio: 4.556857e-01	ci left: 1.673113e-05	ci right 2.683810e-05	k: 73	n:3420000
Cons ci ratio: 6.630433e-04	ci left: 9.105733e-01	ci right 9.111775e-01	k: 3115195	n:3420000
KS ci ratio: 1.131604e+00	ci left: 1.605604e-06	ci right 5.754975e-06	k: 11	n:3420000
IL32   3420000 perm   5010 sec   (683 perm/sec)   p_kst 3.216374e-06   p_cons 9.108757e-01   p_joint 2.134503e-05

Joint ci ratio: 4.556858e-01	ci left: 1.668235e-05	ci right 2.675985e-05	k: 73	n:3430000
Cons ci ratio: 6.620877e-04	ci left: 9.105709e-01	ci right 9.111742e-01	k: 3124294	n:3430000
KS ci ratio: 1.131604e+00	ci left: 1.600922e-06	ci right 5.738196e-06	k: 11	n:3430000
IL32   3430000 perm   5037 sec   (681 perm/sec)   p_kst 3.206997e-06   p_cons 9.108729e-01   p_joint 2.128280e-05

Joint ci ratio: 4.556858e-01	ci left: 1.663386e-05	ci right 2.668206e-05	k: 73	n:3440000
Cons ci ratio: 6.611669e-04	ci left: 9.105609e-01	ci right 9.111634e-01	k: 3133367	n:3440000
KS ci ratio: 1.131604e+00	ci left: 1.596269e-06	ci right 5.721516e-06	k: 11	n:3440000
IL32   3440000 perm   5065 sec   (679 perm/sec)   p_kst 3.197674e-06   p_cons 9.108625e-01   p_joint 2.122093e-05

Joint ci ratio: 4.556858e-01	ci left: 1.658564e-05	ci right 2.660472e-05	k: 73	n:3450000
Cons ci ratio: 6.601734e-04	ci left: 9.105699e-01	ci right 9.111715e-01	k: 3142505	n:3450000
KS ci ratio: 1.131604e+00	ci left: 1.591642e-06	ci right 5.704932e-06	k: 11	n:3450000
IL32   3450000 perm   5093 sec   (677 perm/sec)   p_kst 3.188406e-06   p_cons 9.108710e-01   p_joint 2.115942e-05

Joint ci ratio: 4.556858e-01	ci left: 1.653771e-05	ci right 2.652783e-05	k: 73	n:3460000
Cons ci ratio: 6.591937e-04	ci left: 9.105765e-01	ci right 9.111772e-01	k: 3151635	n:3460000
KS ci ratio: 1.131604e+00	ci left: 1.587042e-06	ci right 5.688443e-06	k: 11	n:3460000
IL32   3460000 perm   5121 sec   (676 perm/sec)   p_kst 3.179191e-06   p_cons 9.108772e-01   p_joint 2.109827e-05

Joint ci ratio: 4.556858e-01	ci left: 1.649005e-05	ci right 2.645138e-05	k: 73	n:3470000
Cons ci ratio: 6.581973e-04	ci left: 9.105882e-01	ci right 9.111880e-01	k: 3160783	n:3470000
KS ci ratio: 1.131604e+00	ci left: 1.582468e-06	ci right 5.672050e-06	k: 11	n:3470000
IL32   3470000 perm   5148 sec   (674 perm/sec)   p_kst 3.170029e-06   p_cons 9.108885e-01   p_joint 2.103746e-05

Joint ci ratio: 4.556858e-01	ci left: 1.644266e-05	ci right 2.637537e-05	k: 73	n:3480000
Cons ci ratio: 6.572008e-04	ci left: 9.106011e-01	ci right 9.112000e-01	k: 3169935	n:3480000
KS ci ratio: 1.131604e+00	ci left: 1.577921e-06	ci right 5.655751e-06	k: 11	n:3480000
IL32   3480000 perm   5177 sec   (672 perm/sec)   p_kst 3.160920e-06   p_cons 9.109009e-01   p_joint 2.097701e-05

Joint ci ratio: 4.556858e-01	ci left: 1.639555e-05	ci right 2.629980e-05	k: 73	n:3490000
Cons ci ratio: 6.562238e-04	ci left: 9.106101e-01	ci right 9.112081e-01	k: 3179074	n:3490000
KS ci ratio: 1.131604e+00	ci left: 1.573399e-06	ci right 5.639546e-06	k: 11	n:3490000
IL32   3490000 perm   5206 sec   (670 perm/sec)   p_kst 3.151862e-06   p_cons 9.109095e-01   p_joint 2.091691e-05

Joint ci ratio: 4.556859e-01	ci left: 1.634871e-05	ci right 2.622466e-05	k: 73	n:3500000
Cons ci ratio: 6.552604e-04	ci left: 9.106168e-01	ci right 9.112140e-01	k: 3188205	n:3500000
KS ci ratio: 1.131604e+00	ci left: 1.568904e-06	ci right 5.623433e-06	k: 11	n:3500000
IL32   3500000 perm   5234 sec   (669 perm/sec)   p_kst 3.142857e-06   p_cons 9.109157e-01   p_joint 2.085714e-05

Joint ci ratio: 4.526377e-01	ci left: 1.655443e-05	ci right 2.646723e-05	k: 74	n:3510000
Cons ci ratio: 6.543782e-04	ci left: 9.106043e-01	ci right 9.112007e-01	k: 3197269	n:3510000
KS ci ratio: 1.131604e+00	ci left: 1.564434e-06	ci right 5.607411e-06	k: 11	n:3510000
IL32   3510000 perm   5261 sec   (667 perm/sec)   p_kst 3.133903e-06   p_cons 9.109028e-01   p_joint 2.108262e-05

Joint ci ratio: 4.526377e-01	ci left: 1.650740e-05	ci right 2.639204e-05	k: 74	n:3520000
Cons ci ratio: 6.535121e-04	ci left: 9.105888e-01	ci right 9.111844e-01	k: 3206322	n:3520000
KS ci ratio: 1.131604e+00	ci left: 1.559990e-06	ci right 5.591481e-06	k: 11	n:3520000
IL32   3520000 perm   5290 sec   (665 perm/sec)   p_kst 3.125000e-06   p_cons 9.108869e-01   p_joint 2.102273e-05

Joint ci ratio: 5.334403e-01	ci left: 1.124666e-05	ci right 1.963885e-05	k: 53	n:3530000
Cons ci ratio: 6.525868e-04	ci left: 9.105890e-01	ci right 9.111837e-01	k: 3215430	n:3530000
KS ci ratio: 1.131604e+00	ci left: 1.555571e-06	ci right 5.575641e-06	k: 11	n:3530000
IL32   3530000 perm   5319 sec   (664 perm/sec)   p_kst 3.116147e-06   p_cons 9.108867e-01   p_joint 1.501416e-05

Joint ci ratio: 5.717869e-01	ci left: 9.513513e-06	ci right 1.733260e-05	k: 46	n:3540000
Cons ci ratio: 6.517039e-04	ci left: 9.105796e-01	ci right 9.111734e-01	k: 3224504	n:3540000
KS ci ratio: 1.131604e+00	ci left: 1.551176e-06	ci right 5.559891e-06	k: 11	n:3540000
IL32   3540000 perm   5347 sec   (662 perm/sec)   p_kst 3.107345e-06   p_cons 9.108768e-01   p_joint 1.299435e-05

Joint ci ratio: 5.717869e-01	ci left: 9.486714e-06	ci right 1.728378e-05	k: 46	n:3550000
Cons ci ratio: 6.507806e-04	ci left: 9.105812e-01	ci right 9.111742e-01	k: 3233617	n:3550000
KS ci ratio: 1.131604e+00	ci left: 1.546807e-06	ci right 5.544229e-06	k: 11	n:3550000
IL32   3550000 perm   5376 sec   (660 perm/sec)   p_kst 3.098592e-06   p_cons 9.108780e-01   p_joint 1.295775e-05

Joint ci ratio: 6.048655e-01	ci left: 8.264705e-06	ci right 1.562388e-05	k: 41	n:3560000
Cons ci ratio: 6.499096e-04	ci left: 9.105707e-01	ci right 9.111629e-01	k: 3242687	n:3560000
KS ci ratio: 1.131604e+00	ci left: 1.542462e-06	ci right 5.528656e-06	k: 11	n:3560000
IL32   3560000 perm   5404 sec   (659 perm/sec)   p_kst 3.089888e-06   p_cons 9.108671e-01   p_joint 1.151685e-05

Joint ci ratio: 6.048655e-01	ci left: 8.241555e-06	ci right 1.558012e-05	k: 41	n:3570000
Cons ci ratio: 6.490050e-04	ci left: 9.105695e-01	ci right 9.111609e-01	k: 3251790	n:3570000
KS ci ratio: 1.131604e+00	ci left: 1.538141e-06	ci right 5.513169e-06	k: 11	n:3570000
IL32   3570000 perm   5433 sec   (657 perm/sec)   p_kst 3.081232e-06   p_cons 9.108655e-01   p_joint 1.148459e-05

Joint ci ratio: 6.048655e-01	ci left: 8.218534e-06	ci right 1.553660e-05	k: 41	n:3580000
Cons ci ratio: 6.481589e-04	ci left: 9.105546e-01	ci right 9.111453e-01	k: 3260844	n:3580000
KS ci ratio: 1.131604e+00	ci left: 1.533845e-06	ci right 5.497769e-06	k: 11	n:3580000
IL32   3580000 perm   5461 sec   (656 perm/sec)   p_kst 3.072626e-06   p_cons 9.108503e-01   p_joint 1.145251e-05

Joint ci ratio: 6.048655e-01	ci left: 8.195641e-06	ci right 1.549332e-05	k: 41	n:3590000
Cons ci ratio: 6.472716e-04	ci left: 9.105510e-01	ci right 9.111408e-01	k: 3269938	n:3590000
KS ci ratio: 1.131604e+00	ci left: 1.529572e-06	ci right 5.482455e-06	k: 11	n:3590000
IL32   3590000 perm   5489 sec   (654 perm/sec)   p_kst 3.064067e-06   p_cons 9.108462e-01   p_joint 1.142061e-05

Joint ci ratio: 5.977907e-01	ci left: 8.408320e-06	ci right 1.576991e-05	k: 42	n:3600000
Cons ci ratio: 6.464002e-04	ci left: 9.105443e-01	ci right 9.111334e-01	k: 3279021	n:3600000
KS ci ratio: 1.131604e+00	ci left: 1.525323e-06	ci right 5.467226e-06	k: 11	n:3600000
IL32   3600000 perm   5517 sec   (652 perm/sec)   p_kst 3.055556e-06   p_cons 9.108392e-01   p_joint 1.166667e-05

Joint ci ratio: 5.977908e-01	ci left: 8.385028e-06	ci right 1.572623e-05	k: 42	n:3610000
Cons ci ratio: 6.455454e-04	ci left: 9.105344e-01	ci right 9.111226e-01	k: 3288092	n:3610000
KS ci ratio: 1.131604e+00	ci left: 1.521098e-06	ci right 5.452082e-06	k: 11	n:3610000
IL32   3610000 perm   5546 sec   (651 perm/sec)   p_kst 3.047091e-06   p_cons 9.108288e-01   p_joint 1.163435e-05

Joint ci ratio: 5.977908e-01	ci left: 8.361865e-06	ci right 1.568279e-05	k: 42	n:3620000
Cons ci ratio: 6.446469e-04	ci left: 9.105363e-01	ci right 9.111238e-01	k: 3297206	n:3620000
KS ci ratio: 1.131604e+00	ci left: 1.516896e-06	ci right 5.437021e-06	k: 11	n:3620000
IL32   3620000 perm   5576 sec   (649 perm/sec)   p_kst 3.038674e-06   p_cons 9.108304e-01   p_joint 1.160221e-05

Joint ci ratio: 5.977908e-01	ci left: 8.338829e-06	ci right 1.563958e-05	k: 42	n:3630000
Cons ci ratio: 6.437390e-04	ci left: 9.105416e-01	ci right 9.111282e-01	k: 3306332	n:3630000
KS ci ratio: 1.131605e+00	ci left: 1.512717e-06	ci right 5.422043e-06	k: 11	n:3630000
IL32   3630000 perm   5605 sec   (648 perm/sec)   p_kst 3.030303e-06   p_cons 9.108353e-01   p_joint 1.157025e-05

Joint ci ratio: 5.977908e-01	ci left: 8.315920e-06	ci right 1.559662e-05	k: 42	n:3640000
Cons ci ratio: 6.428708e-04	ci left: 9.105378e-01	ci right 9.111236e-01	k: 3315425	n:3640000
KS ci ratio: 1.131605e+00	ci left: 1.508561e-06	ci right 5.407147e-06	k: 11	n:3640000
IL32   3640000 perm   5634 sec   (646 perm/sec)   p_kst 3.021978e-06   p_cons 9.108310e-01   p_joint 1.153846e-05

Joint ci ratio: 5.977908e-01	ci left: 8.293137e-06	ci right 1.555389e-05	k: 42	n:3650000
Cons ci ratio: 6.419888e-04	ci left: 9.105384e-01	ci right 9.111234e-01	k: 3324534	n:3650000
KS ci ratio: 1.131605e+00	ci left: 1.504428e-06	ci right 5.392333e-06	k: 11	n:3650000
IL32   3650000 perm   5663 sec   (645 perm/sec)   p_kst 3.013699e-06   p_cons 9.108312e-01   p_joint 1.150685e-05

Joint ci ratio: 5.977908e-01	ci left: 8.270478e-06	ci right 1.551139e-05	k: 42	n:3660000
Cons ci ratio: 6.410943e-04	ci left: 9.105431e-01	ci right 9.111273e-01	k: 3333658	n:3660000
KS ci ratio: 1.131605e+00	ci left: 1.500318e-06	ci right 5.377600e-06	k: 11	n:3660000
IL32   3660000 perm   5692 sec   (643 perm/sec)   p_kst 3.005464e-06   p_cons 9.108355e-01   p_joint 1.147541e-05

Joint ci ratio: 5.977908e-01	ci left: 8.247943e-06	ci right 1.546912e-05	k: 42	n:3670000
Cons ci ratio: 6.402325e-04	ci left: 9.105404e-01	ci right 9.111238e-01	k: 3342755	n:3670000
KS ci ratio: 1.131605e+00	ci left: 1.496230e-06	ci right 5.362947e-06	k: 11	n:3670000
IL32   3670000 perm   5722 sec   (641 perm/sec)   p_kst 2.997275e-06   p_cons 9.108324e-01   p_joint 1.144414e-05

Joint ci ratio: 5.977908e-01	ci left: 8.225530e-06	ci right 1.542709e-05	k: 42	n:3680000
Cons ci ratio: 6.393313e-04	ci left: 9.105486e-01	ci right 9.111312e-01	k: 3351892	n:3680000
KS ci ratio: 1.131605e+00	ci left: 1.492164e-06	ci right 5.348374e-06	k: 11	n:3680000
IL32   3680000 perm   5751 sec   (640 perm/sec)   p_kst 2.989130e-06   p_cons 9.108402e-01   p_joint 1.141304e-05

Joint ci ratio: 5.977908e-01	ci left: 8.203238e-06	ci right 1.538528e-05	k: 42	n:3690000
Cons ci ratio: 6.384840e-04	ci left: 9.105440e-01	ci right 9.111258e-01	k: 3360982	n:3690000
KS ci ratio: 1.131605e+00	ci left: 1.488120e-06	ci right 5.333879e-06	k: 11	n:3690000
IL32   3690000 perm   5780 sec   (638 perm/sec)   p_kst 2.981030e-06   p_cons 9.108352e-01   p_joint 1.138211e-05

Joint ci ratio: 5.977908e-01	ci left: 8.181067e-06	ci right 1.534370e-05	k: 42	n:3700000
Cons ci ratio: 6.376953e-04	ci left: 9.105254e-01	ci right 9.111064e-01	k: 3370020	n:3700000
KS ci ratio: 1.131605e+00	ci left: 1.484098e-06	ci right 5.319464e-06	k: 11	n:3700000
IL32   3700000 perm   5809 sec   (637 perm/sec)   p_kst 2.972973e-06   p_cons 9.108162e-01   p_joint 1.135135e-05

Joint ci ratio: 5.977909e-01	ci left: 8.159016e-06	ci right 1.530234e-05	k: 42	n:3710000
Cons ci ratio: 6.368365e-04	ci left: 9.105254e-01	ci right 9.111057e-01	k: 3379127	n:3710000
KS ci ratio: 1.131605e+00	ci left: 1.480098e-06	ci right 5.305125e-06	k: 11	n:3710000
IL32   3710000 perm   5838 sec   (635 perm/sec)   p_kst 2.964960e-06   p_cons 9.108159e-01   p_joint 1.132075e-05

Joint ci ratio: 5.977909e-01	ci left: 8.137083e-06	ci right 1.526121e-05	k: 42	n:3720000
Cons ci ratio: 6.360064e-04	ci left: 9.105191e-01	ci right 9.110986e-01	k: 3388210	n:3720000
KS ci ratio: 1.131605e+00	ci left: 1.476119e-06	ci right 5.290864e-06	k: 11	n:3720000
IL32   3720000 perm   5868 sec   (634 perm/sec)   p_kst 2.956989e-06   p_cons 9.108091e-01   p_joint 1.129032e-05

Joint ci ratio: 5.977909e-01	ci left: 8.115268e-06	ci right 1.522029e-05	k: 42	n:3730000
Cons ci ratio: 6.351754e-04	ci left: 9.105138e-01	ci right 9.110926e-01	k: 3397297	n:3730000
KS ci ratio: 1.131605e+00	ci left: 1.472162e-06	ci right 5.276680e-06	k: 11	n:3730000
IL32   3730000 perm   5898 sec   (632 perm/sec)   p_kst 2.949062e-06   p_cons 9.108035e-01   p_joint 1.126005e-05

Joint ci ratio: 5.977909e-01	ci left: 8.093569e-06	ci right 1.517960e-05	k: 42	n:3740000
Cons ci ratio: 6.343393e-04	ci left: 9.105107e-01	ci right 9.110887e-01	k: 3406392	n:3740000
KS ci ratio: 1.131605e+00	ci left: 1.468226e-06	ci right 5.262571e-06	k: 11	n:3740000
IL32   3740000 perm   5928 sec   (631 perm/sec)   p_kst 2.941176e-06   p_cons 9.108000e-01   p_joint 1.122995e-05

Joint ci ratio: 5.977909e-01	ci left: 8.071986e-06	ci right 1.513912e-05	k: 42	n:3750000
Cons ci ratio: 6.334992e-04	ci left: 9.105095e-01	ci right 9.110867e-01	k: 3415494	n:3750000
KS ci ratio: 1.131605e+00	ci left: 1.464310e-06	ci right 5.248538e-06	k: 11	n:3750000
IL32   3750000 perm   5958 sec   (629 perm/sec)   p_kst 2.933333e-06   p_cons 9.107984e-01   p_joint 1.120000e-05

Joint ci ratio: 5.977909e-01	ci left: 8.050518e-06	ci right 1.509885e-05	k: 42	n:3760000
Cons ci ratio: 6.326541e-04	ci left: 9.105104e-01	ci right 9.110869e-01	k: 3424604	n:3760000
KS ci ratio: 1.131605e+00	ci left: 1.460416e-06	ci right 5.234579e-06	k: 11	n:3760000
IL32   3760000 perm   5988 sec   (628 perm/sec)   p_kst 2.925532e-06   p_cons 9.107989e-01   p_joint 1.117021e-05

Joint ci ratio: 5.977909e-01	ci left: 8.029164e-06	ci right 1.505880e-05	k: 42	n:3770000
Cons ci ratio: 6.317680e-04	ci left: 9.105227e-01	ci right 9.110984e-01	k: 3433757	n:3770000
KS ci ratio: 1.131605e+00	ci left: 1.456542e-06	ci right 5.220694e-06	k: 11	n:3770000
IL32   3770000 perm   6018 sec   (626 perm/sec)   p_kst 2.917772e-06   p_cons 9.108109e-01   p_joint 1.114058e-05

Joint ci ratio: 5.977909e-01	ci left: 8.007923e-06	ci right 1.501897e-05	k: 42	n:3780000
Cons ci ratio: 6.308960e-04	ci left: 9.105323e-01	ci right 9.111072e-01	k: 3442900	n:3780000
KS ci ratio: 1.131605e+00	ci left: 1.452689e-06	ci right 5.206883e-06	k: 11	n:3780000
IL32   3780000 perm   6049 sec   (625 perm/sec)   p_kst 2.910053e-06   p_cons 9.108201e-01   p_joint 1.111111e-05

Joint ci ratio: 5.977909e-01	ci left: 7.986794e-06	ci right 1.497934e-05	k: 42	n:3790000
Cons ci ratio: 6.301063e-04	ci left: 9.105216e-01	ci right 9.110957e-01	k: 3451966	n:3790000
KS ci ratio: 1.131605e+00	ci left: 1.448856e-06	ci right 5.193144e-06	k: 11	n:3790000
IL32   3790000 perm   6079 sec   (623 perm/sec)   p_kst 2.902375e-06   p_cons 9.108090e-01   p_joint 1.108179e-05

Joint ci ratio: 5.977909e-01	ci left: 7.965776e-06	ci right 1.493992e-05	k: 42	n:3800000
Cons ci ratio: 6.292920e-04	ci left: 9.105180e-01	ci right 9.110914e-01	k: 3461059	n:3800000
KS ci ratio: 1.131605e+00	ci left: 1.445043e-06	ci right 5.179478e-06	k: 11	n:3800000
IL32   3800000 perm   6110 sec   (622 perm/sec)   p_kst 2.894737e-06   p_cons 9.108050e-01   p_joint 1.105263e-05

Joint ci ratio: 5.977909e-01	ci left: 7.944868e-06	ci right 1.490071e-05	k: 42	n:3810000
Cons ci ratio: 6.284819e-04	ci left: 9.105141e-01	ci right 9.110868e-01	k: 3470151	n:3810000
KS ci ratio: 1.131605e+00	ci left: 1.441250e-06	ci right 5.165883e-06	k: 11	n:3810000
IL32   3810000 perm   6141 sec   (620 perm/sec)   p_kst 2.887139e-06   p_cons 9.108008e-01   p_joint 1.102362e-05

Joint ci ratio: 5.977910e-01	ci left: 7.924070e-06	ci right 1.486170e-05	k: 42	n:3820000
Cons ci ratio: 6.276618e-04	ci left: 9.105137e-01	ci right 9.110857e-01	k: 3479256	n:3820000
KS ci ratio: 1.131605e+00	ci left: 1.437477e-06	ci right 5.152360e-06	k: 11	n:3820000
IL32   3820000 perm   6170 sec   (619 perm/sec)   p_kst 2.879581e-06   p_cons 9.108000e-01   p_joint 1.099476e-05

Joint ci ratio: 5.977910e-01	ci left: 7.903381e-06	ci right 1.482290e-05	k: 42	n:3830000
Cons ci ratio: 6.268499e-04	ci left: 9.105120e-01	ci right 9.110832e-01	k: 3488356	n:3830000
KS ci ratio: 1.131605e+00	ci left: 1.433724e-06	ci right 5.138908e-06	k: 11	n:3830000
IL32   3830000 perm   6200 sec   (618 perm/sec)   p_kst 2.872063e-06   p_cons 9.107979e-01   p_joint 1.096606e-05

Joint ci ratio: 5.977910e-01	ci left: 7.882799e-06	ci right 1.478429e-05	k: 42	n:3840000
Cons ci ratio: 6.260362e-04	ci left: 9.105116e-01	ci right 9.110820e-01	k: 3497461	n:3840000
KS ci ratio: 1.131605e+00	ci left: 1.429991e-06	ci right 5.125525e-06	k: 11	n:3840000
IL32   3840000 perm   6231 sec   (616 perm/sec)   p_kst 2.864583e-06   p_cons 9.107971e-01   p_joint 1.093750e-05

Joint ci ratio: 5.977910e-01	ci left: 7.862324e-06	ci right 1.474589e-05	k: 42	n:3850000
Cons ci ratio: 6.252176e-04	ci left: 9.105133e-01	ci right 9.110830e-01	k: 3506574	n:3850000
KS ci ratio: 1.131605e+00	ci left: 1.426276e-06	ci right 5.112212e-06	k: 11	n:3850000
IL32   3850000 perm   6261 sec   (615 perm/sec)   p_kst 2.857143e-06   p_cons 9.107984e-01   p_joint 1.090909e-05

Joint ci ratio: 5.977910e-01	ci left: 7.841955e-06	ci right 1.470769e-05	k: 42	n:3860000
Cons ci ratio: 6.244331e-04	ci left: 9.105069e-01	ci right 9.110759e-01	k: 3515656	n:3860000
KS ci ratio: 1.131605e+00	ci left: 1.422581e-06	ci right 5.098968e-06	k: 11	n:3860000
IL32   3860000 perm   6291 sec   (614 perm/sec)   p_kst 2.849741e-06   p_cons 9.107917e-01   p_joint 1.088083e-05

Joint ci ratio: 5.977910e-01	ci left: 7.821692e-06	ci right 1.466969e-05	k: 42	n:3870000
Cons ci ratio: 6.236951e-04	ci left: 9.104892e-01	ci right 9.110575e-01	k: 3524694	n:3870000
KS ci ratio: 1.131605e+00	ci left: 1.418905e-06	ci right 5.085792e-06	k: 11	n:3870000
IL32   3870000 perm   6322 sec   (612 perm/sec)   p_kst 2.842377e-06   p_cons 9.107736e-01   p_joint 1.085271e-05

Joint ci ratio: 5.977910e-01	ci left: 7.801533e-06	ci right 1.463188e-05	k: 42	n:3880000
Cons ci ratio: 6.228738e-04	ci left: 9.104940e-01	ci right 9.110616e-01	k: 3533819	n:3880000
KS ci ratio: 1.131605e+00	ci left: 1.415248e-06	ci right 5.072685e-06	k: 11	n:3880000
IL32   3880000 perm   6353 sec   (611 perm/sec)   p_kst 2.835052e-06   p_cons 9.107781e-01   p_joint 1.082474e-05

Joint ci ratio: 6.198032e-01	ci left: 7.129267e-06	ci right 1.370545e-05	k: 39	n:3890000
Cons ci ratio: 6.220784e-04	ci left: 9.104929e-01	ci right 9.110597e-01	k: 3542921	n:3890000
KS ci ratio: 1.131605e+00	ci left: 1.411610e-06	ci right 5.059644e-06	k: 11	n:3890000
IL32   3890000 perm   6385 sec   (609 perm/sec)   p_kst 2.827763e-06   p_cons 9.107766e-01   p_joint 1.002571e-05

Joint ci ratio: 6.198032e-01	ci left: 7.110987e-06	ci right 1.367030e-05	k: 39	n:3900000
Cons ci ratio: 6.213164e-04	ci left: 9.104838e-01	ci right 9.110499e-01	k: 3551992	n:3900000
KS ci ratio: 1.131605e+00	ci left: 1.407991e-06	ci right 5.046671e-06	k: 11	n:3900000
IL32   3900000 perm   6415 sec   (608 perm/sec)   p_kst 2.820513e-06   p_cons 9.107672e-01   p_joint 1.000000e-05

Joint ci ratio: 6.198032e-01	ci left: 7.092800e-06	ci right 1.363534e-05	k: 39	n:3910000
Cons ci ratio: 6.205103e-04	ci left: 9.104871e-01	ci right 9.110525e-01	k: 3561111	n:3910000
KS ci ratio: 1.131605e+00	ci left: 1.404390e-06	ci right 5.033764e-06	k: 11	n:3910000
IL32   3910000 perm   6446 sec   (607 perm/sec)   p_kst 2.813299e-06   p_cons 9.107701e-01   p_joint 9.974425e-06

Joint ci ratio: 6.121979e-01	ci left: 7.289955e-06	ci right 1.389504e-05	k: 40	n:3920000
Cons ci ratio: 6.196733e-04	ci left: 9.104993e-01	ci right 9.110639e-01	k: 3570265	n:3920000
KS ci ratio: 1.131605e+00	ci left: 1.400807e-06	ci right 5.020923e-06	k: 11	n:3920000
IL32   3920000 perm   6477 sec   (605 perm/sec)   p_kst 2.806122e-06   p_cons 9.107819e-01   p_joint 1.020408e-05

Joint ci ratio: 6.048658e-01	ci left: 7.486602e-06	ci right 1.415293e-05	k: 41	n:3930000
Cons ci ratio: 6.189113e-04	ci left: 9.104925e-01	ci right 9.110565e-01	k: 3579345	n:3930000
KS ci ratio: 1.131605e+00	ci left: 1.397243e-06	ci right 5.008147e-06	k: 11	n:3930000
IL32   3930000 perm   6508 sec   (604 perm/sec)   p_kst 2.798982e-06   p_cons 9.107748e-01   p_joint 1.043257e-05

Joint ci ratio: 6.048658e-01	ci left: 7.467601e-06	ci right 1.411701e-05	k: 41	n:3940000
Cons ci ratio: 6.180972e-04	ci left: 9.105003e-01	ci right 9.110635e-01	k: 3588482	n:3940000
KS ci ratio: 1.131605e+00	ci left: 1.393696e-06	ci right 4.995436e-06	k: 11	n:3940000
IL32   3940000 perm   6541 sec   (602 perm/sec)   p_kst 2.791878e-06   p_cons 9.107822e-01   p_joint 1.040609e-05

Joint ci ratio: 7.040499e-01	ci left: 5.124278e-06	ci right 1.084223e-05	k: 30	n:3950000
Cons ci ratio: 6.173362e-04	ci left: 9.104949e-01	ci right 9.110574e-01	k: 3597567	n:3950000
KS ci ratio: 1.131605e+00	ci left: 1.390168e-06	ci right 4.982789e-06	k: 11	n:3950000
IL32   3950000 perm   6573 sec   (601 perm/sec)   p_kst 2.784810e-06   p_cons 9.107765e-01   p_joint 7.594937e-06

Joint ci ratio: 7.040499e-01	ci left: 5.111337e-06	ci right 1.081485e-05	k: 30	n:3960000
Cons ci ratio: 6.165675e-04	ci left: 9.104923e-01	ci right 9.110541e-01	k: 3606663	n:3960000
KS ci ratio: 1.131605e+00	ci left: 1.386657e-06	ci right 4.970206e-06	k: 11	n:3960000
IL32   3960000 perm   6605 sec   (600 perm/sec)   p_kst 2.777778e-06   p_cons 9.107735e-01   p_joint 7.575758e-06

Joint ci ratio: 7.040499e-01	ci left: 5.098463e-06	ci right 1.078761e-05	k: 30	n:3970000
Cons ci ratio: 6.157559e-04	ci left: 9.105018e-01	ci right 9.110629e-01	k: 3615807	n:3970000
KS ci ratio: 1.131605e+00	ci left: 1.383165e-06	ci right 4.957687e-06	k: 11	n:3970000
IL32   3970000 perm   6636 sec   (598 perm/sec)   p_kst 2.770781e-06   p_cons 9.107826e-01   p_joint 7.556675e-06

Joint ci ratio: 6.929618e-01	ci left: 5.292216e-06	ci right 1.105577e-05	k: 31	n:3980000
Cons ci ratio: 6.149626e-04	ci left: 9.105072e-01	ci right 9.110676e-01	k: 3624935	n:3980000
KS ci ratio: 1.131605e+00	ci left: 1.379689e-06	ci right 4.945230e-06	k: 11	n:3980000
IL32   3980000 perm   6668 sec   (597 perm/sec)   p_kst 2.763819e-06   p_cons 9.107877e-01   p_joint 7.788945e-06

Joint ci ratio: 6.929618e-01	ci left: 5.278952e-06	ci right 1.102806e-05	k: 31	n:3990000
Cons ci ratio: 6.141507e-04	ci left: 9.105184e-01	ci right 9.110780e-01	k: 3634086	n:3990000
KS ci ratio: 1.131605e+00	ci left: 1.376231e-06	ci right 4.932836e-06	k: 11	n:3990000
IL32   3990000 perm   6700 sec   (596 perm/sec)   p_kst 2.756892e-06   p_cons 9.107985e-01   p_joint 7.769424e-06

Joint ci ratio: 6.929618e-01	ci left: 5.265755e-06	ci right 1.100049e-05	k: 31	n:4000000
Cons ci ratio: 6.133919e-04	ci left: 9.105162e-01	ci right 9.110752e-01	k: 3643184	n:4000000
KS ci ratio: 1.131605e+00	ci left: 1.372791e-06	ci right 4.920504e-06	k: 11	n:4000000
IL32   4000000 perm   6731 sec   (594 perm/sec)   p_kst 2.750000e-06   p_cons 9.107960e-01   p_joint 7.750000e-06

Joint ci ratio: 6.929618e-01	ci left: 5.252623e-06	ci right 1.097306e-05	k: 31	n:4010000
Cons ci ratio: 6.126398e-04	ci left: 9.105131e-01	ci right 9.110713e-01	k: 3652278	n:4010000
KS ci ratio: 1.131605e+00	ci left: 1.369367e-06	ci right 4.908234e-06	k: 11	n:4010000
IL32   4010000 perm   6763 sec   (593 perm/sec)   p_kst 2.743142e-06   p_cons 9.107925e-01   p_joint 7.730673e-06

Joint ci ratio: 6.929618e-01	ci left: 5.239557e-06	ci right 1.094576e-05	k: 31	n:4020000
Cons ci ratio: 6.118173e-04	ci left: 9.105294e-01	ci right 9.110869e-01	k: 3661450	n:4020000
KS ci ratio: 1.131605e+00	ci left: 1.365961e-06	ci right 4.896024e-06	k: 11	n:4020000
IL32   4020000 perm   6795 sec   (592 perm/sec)   p_kst 2.736318e-06   p_cons 9.108085e-01   p_joint 7.711443e-06

Joint ci ratio: 6.929618e-01	ci left: 5.226556e-06	ci right 1.091860e-05	k: 31	n:4030000
Cons ci ratio: 6.110951e-04	ci left: 9.105198e-01	ci right 9.110766e-01	k: 3670518	n:4030000
KS ci ratio: 1.131605e+00	ci left: 1.362572e-06	ci right 4.883875e-06	k: 11	n:4030000
IL32   4030000 perm   6827 sec   (590 perm/sec)   p_kst 2.729529e-06   p_cons 9.107985e-01   p_joint 7.692308e-06

Joint ci ratio: 6.929618e-01	ci left: 5.213619e-06	ci right 1.089157e-05	k: 31	n:4040000
Cons ci ratio: 6.103253e-04	ci left: 9.105236e-01	ci right 9.110797e-01	k: 3679640	n:4040000
KS ci ratio: 1.131605e+00	ci left: 1.359199e-06	ci right 4.871786e-06	k: 11	n:4040000
IL32   4040000 perm   6858 sec   (589 perm/sec)   p_kst 2.722772e-06   p_cons 9.108020e-01   p_joint 7.673267e-06

Joint ci ratio: 6.823815e-01	ci left: 5.404445e-06	ci right 1.115417e-05	k: 32	n:4050000
Cons ci ratio: 6.095417e-04	ci left: 9.105319e-01	ci right 9.110873e-01	k: 3688780	n:4050000
KS ci ratio: 1.131605e+00	ci left: 1.355843e-06	ci right 4.859757e-06	k: 11	n:4050000
IL32   4050000 perm   6890 sec   (588 perm/sec)   p_kst 2.716049e-06   p_cons 9.108099e-01   p_joint 7.901235e-06

Joint ci ratio: 6.823816e-01	ci left: 5.391133e-06	ci right 1.112669e-05	k: 32	n:4060000
Cons ci ratio: 6.088129e-04	ci left: 9.105263e-01	ci right 9.110810e-01	k: 3697864	n:4060000
KS ci ratio: 1.131605e+00	ci left: 1.352503e-06	ci right 4.847788e-06	k: 11	n:4060000
IL32   4060000 perm   6922 sec   (587 perm/sec)   p_kst 2.709360e-06   p_cons 9.108039e-01   p_joint 7.881773e-06

Joint ci ratio: 6.823816e-01	ci left: 5.377887e-06	ci right 1.109936e-05	k: 32	n:4070000
Cons ci ratio: 6.080342e-04	ci left: 9.105347e-01	ci right 9.110888e-01	k: 3707005	n:4070000
KS ci ratio: 1.131605e+00	ci left: 1.349180e-06	ci right 4.835877e-06	k: 11	n:4070000
IL32   4070000 perm   6956 sec   (585 perm/sec)   p_kst 2.702703e-06   p_cons 9.108120e-01   p_joint 7.862408e-06

Joint ci ratio: 6.823816e-01	ci left: 5.364706e-06	ci right 1.107215e-05	k: 32	n:4080000
Cons ci ratio: 6.072639e-04	ci left: 9.105417e-01	ci right 9.110950e-01	k: 3716140	n:4080000
KS ci ratio: 1.131605e+00	ci left: 1.345873e-06	ci right 4.824024e-06	k: 11	n:4080000
IL32   4080000 perm   6988 sec   (584 perm/sec)   p_kst 2.696078e-06   p_cons 9.108186e-01   p_joint 7.843137e-06

Joint ci ratio: 6.823816e-01	ci left: 5.351589e-06	ci right 1.104508e-05	k: 32	n:4090000
Cons ci ratio: 6.065267e-04	ci left: 9.105405e-01	ci right 9.110932e-01	k: 3725242	n:4090000
KS ci ratio: 1.131605e+00	ci left: 1.342583e-06	ci right 4.812229e-06	k: 11	n:4090000
IL32   4090000 perm   7021 sec   (583 perm/sec)   p_kst 2.689487e-06   p_cons 9.108171e-01   p_joint 7.823961e-06

Joint ci ratio: 6.823816e-01	ci left: 5.338537e-06	ci right 1.101814e-05	k: 32	n:4100000
Cons ci ratio: 6.057886e-04	ci left: 9.105403e-01	ci right 9.110923e-01	k: 3734348	n:4100000
KS ci ratio: 1.131605e+00	ci left: 1.339308e-06	ci right 4.800492e-06	k: 11	n:4100000
IL32   4100000 perm   7053 sec   (581 perm/sec)   p_kst 2.682927e-06   p_cons 9.108166e-01   p_joint 7.804878e-06

Joint ci ratio: 6.823816e-01	ci left: 5.325548e-06	ci right 1.099133e-05	k: 32	n:4110000
Cons ci ratio: 6.051066e-04	ci left: 9.105257e-01	ci right 9.110771e-01	k: 3743395	n:4110000
KS ci ratio: 1.131605e+00	ci left: 1.336049e-06	ci right 4.788812e-06	k: 11	n:4110000
IL32   4110000 perm   7085 sec   (580 perm/sec)   p_kst 2.676399e-06   p_cons 9.108017e-01   p_joint 7.785888e-06

Joint ci ratio: 6.823816e-01	ci left: 5.312621e-06	ci right 1.096466e-05	k: 32	n:4120000
Cons ci ratio: 6.043583e-04	ci left: 9.105297e-01	ci right 9.110804e-01	k: 3752518	n:4120000
KS ci ratio: 1.131605e+00	ci left: 1.332807e-06	ci right 4.777189e-06	k: 11	n:4120000
IL32   4120000 perm   7118 sec   (579 perm/sec)   p_kst 2.669903e-06   p_cons 9.108053e-01   p_joint 7.766990e-06

Joint ci ratio: 6.823816e-01	ci left: 5.299758e-06	ci right 1.093811e-05	k: 32	n:4130000
Cons ci ratio: 6.035902e-04	ci left: 9.105397e-01	ci right 9.110897e-01	k: 3761666	n:4130000
KS ci ratio: 1.131605e+00	ci left: 1.329580e-06	ci right 4.765622e-06	k: 11	n:4130000
IL32   4130000 perm   7151 sec   (578 perm/sec)   p_kst 2.663438e-06   p_cons 9.108150e-01   p_joint 7.748184e-06

Joint ci ratio: 6.722716e-01	ci left: 5.486886e-06	ci right 1.119425e-05	k: 33	n:4140000
Cons ci ratio: 6.028520e-04	ci left: 9.105424e-01	ci right 9.110918e-01	k: 3770784	n:4140000
KS ci ratio: 1.131605e+00	ci left: 1.326368e-06	ci right 4.754111e-06	k: 11	n:4140000
IL32   4140000 perm   7183 sec   (576 perm/sec)   p_kst 2.657005e-06   p_cons 9.108174e-01   p_joint 7.971014e-06

Joint ci ratio: 6.722716e-01	ci left: 5.473664e-06	ci right 1.116728e-05	k: 33	n:4150000
Cons ci ratio: 6.021629e-04	ci left: 9.105326e-01	ci right 9.110813e-01	k: 3779850	n:4150000
KS ci ratio: 1.131605e+00	ci left: 1.323172e-06	ci right 4.742655e-06	k: 11	n:4150000
IL32   4150000 perm   7216 sec   (575 perm/sec)   p_kst 2.650602e-06   p_cons 9.108072e-01   p_joint 7.951807e-06

Joint ci ratio: 6.722716e-01	ci left: 5.460506e-06	ci right 1.114043e-05	k: 33	n:4160000
Cons ci ratio: 6.014672e-04	ci left: 9.105252e-01	ci right 9.110733e-01	k: 3788926	n:4160000
KS ci ratio: 1.131605e+00	ci left: 1.319991e-06	ci right 4.731254e-06	k: 11	n:4160000
IL32   4160000 perm   7249 sec   (574 perm/sec)   p_kst 2.644231e-06   p_cons 9.107995e-01   p_joint 7.932692e-06

Joint ci ratio: 6.722716e-01	ci left: 5.447412e-06	ci right 1.111372e-05	k: 33	n:4170000
Cons ci ratio: 6.007305e-04	ci left: 9.105296e-01	ci right 9.110770e-01	k: 3798051	n:4170000
KS ci ratio: 1.131605e+00	ci left: 1.316826e-06	ci right 4.719908e-06	k: 11	n:4170000
IL32   4170000 perm   7282 sec   (573 perm/sec)   p_kst 2.637890e-06   p_cons 9.108036e-01   p_joint 7.913669e-06

Joint ci ratio: 6.722716e-01	ci left: 5.434380e-06	ci right 1.108713e-05	k: 33	n:4180000
Cons ci ratio: 6.000098e-04	ci left: 9.105304e-01	ci right 9.110771e-01	k: 3807161	n:4180000
KS ci ratio: 1.131605e+00	ci left: 1.313675e-06	ci right 4.708617e-06	k: 11	n:4180000
IL32   4180000 perm   7315 sec   (571 perm/sec)   p_kst 2.631579e-06   p_cons 9.108041e-01   p_joint 7.894737e-06

Joint ci ratio: 6.625981e-01	ci left: 5.619574e-06	ci right 1.133926e-05	k: 34	n:4190000
Cons ci ratio: 5.993013e-04	ci left: 9.105286e-01	ci right 9.110747e-01	k: 3816260	n:4190000
KS ci ratio: 1.087211e+00	ci left: 1.479852e-06	ci right 5.002760e-06	k: 12	n:4190000
IL32   4190000 perm   7348 sec   (570 perm/sec)   p_kst 2.863962e-06   p_cons 9.108019e-01   p_joint 8.114558e-06

Joint ci ratio: 6.625981e-01	ci left: 5.606194e-06	ci right 1.131227e-05	k: 34	n:4200000
Cons ci ratio: 5.985866e-04	ci left: 9.105291e-01	ci right 9.110746e-01	k: 3825369	n:4200000
KS ci ratio: 1.087211e+00	ci left: 1.476328e-06	ci right 4.990848e-06	k: 12	n:4200000
IL32   4200000 perm   7383 sec   (569 perm/sec)   p_kst 2.857143e-06   p_cons 9.108021e-01   p_joint 8.095238e-06

Joint ci ratio: 6.625981e-01	ci left: 5.592878e-06	ci right 1.128540e-05	k: 34	n:4210000
Cons ci ratio: 5.979059e-04	ci left: 9.105211e-01	ci right 9.110659e-01	k: 3834442	n:4210000
KS ci ratio: 1.087211e+00	ci left: 1.472822e-06	ci right 4.978994e-06	k: 12	n:4210000
IL32   4210000 perm   7415 sec   (568 perm/sec)   p_kst 2.850356e-06   p_cons 9.107938e-01   p_joint 8.076010e-06

Joint ci ratio: 6.625981e-01	ci left: 5.579624e-06	ci right 1.125865e-05	k: 34	n:4220000
Cons ci ratio: 5.971935e-04	ci left: 9.105224e-01	ci right 9.110666e-01	k: 3843554	n:4220000
KS ci ratio: 1.087211e+00	ci left: 1.469331e-06	ci right 4.967195e-06	k: 12	n:4220000
IL32   4220000 perm   7449 sec   (567 perm/sec)   p_kst 2.843602e-06   p_cons 9.107948e-01   p_joint 8.056872e-06

Joint ci ratio: 6.625981e-01	ci left: 5.566434e-06	ci right 1.123204e-05	k: 34	n:4230000
Cons ci ratio: 5.964368e-04	ci left: 9.105365e-01	ci right 9.110800e-01	k: 3852720	n:4230000
KS ci ratio: 1.087211e+00	ci left: 1.465858e-06	ci right 4.955452e-06	k: 12	n:4230000
IL32   4230000 perm   7482 sec   (565 perm/sec)   p_kst 2.836879e-06   p_cons 9.108085e-01   p_joint 8.037825e-06

Joint ci ratio: 6.625981e-01	ci left: 5.553305e-06	ci right 1.120555e-05	k: 34	n:4240000
Cons ci ratio: 5.957884e-04	ci left: 9.105217e-01	ci right 9.110645e-01	k: 3861764	n:4240000
KS ci ratio: 1.087211e+00	ci left: 1.462401e-06	ci right 4.943765e-06	k: 12	n:4240000
IL32   4240000 perm   7516 sec   (564 perm/sec)   p_kst 2.830189e-06   p_cons 9.107934e-01   p_joint 8.018868e-06

Joint ci ratio: 6.625981e-01	ci left: 5.540239e-06	ci right 1.117918e-05	k: 34	n:4250000
Cons ci ratio: 5.950965e-04	ci left: 9.105194e-01	ci right 9.110617e-01	k: 3870861	n:4250000
KS ci ratio: 1.087211e+00	ci left: 1.458960e-06	ci right 4.932132e-06	k: 12	n:4250000
IL32   4250000 perm   7550 sec   (563 perm/sec)   p_kst 2.823529e-06   p_cons 9.107908e-01   p_joint 8.000000e-06

Joint ci ratio: 6.625981e-01	ci left: 5.527233e-06	ci right 1.115294e-05	k: 34	n:4260000
Cons ci ratio: 5.943890e-04	ci left: 9.105221e-01	ci right 9.110637e-01	k: 3879979	n:4260000
KS ci ratio: 1.087211e+00	ci left: 1.455535e-06	ci right 4.920555e-06	k: 12	n:4260000
IL32   4260000 perm   7583 sec   (562 perm/sec)   p_kst 2.816901e-06   p_cons 9.107932e-01   p_joint 7.981221e-06

Joint ci ratio: 6.625981e-01	ci left: 5.514289e-06	ci right 1.112682e-05	k: 34	n:4270000
Cons ci ratio: 5.936942e-04	ci left: 9.105220e-01	ci right 9.110629e-01	k: 3889085	n:4270000
KS ci ratio: 1.087211e+00	ci left: 1.452126e-06	ci right 4.909031e-06	k: 12	n:4270000
IL32   4270000 perm   7617 sec   (561 perm/sec)   p_kst 2.810304e-06   p_cons 9.107927e-01   p_joint 7.962529e-06

Joint ci ratio: 6.625981e-01	ci left: 5.501405e-06	ci right 1.110082e-05	k: 34	n:4280000
Cons ci ratio: 5.930010e-04	ci left: 9.105221e-01	ci right 9.110624e-01	k: 3898192	n:4280000
KS ci ratio: 1.087211e+00	ci left: 1.448733e-06	ci right 4.897561e-06	k: 12	n:4280000
IL32   4280000 perm   7651 sec   (559 perm/sec)   p_kst 2.803738e-06   p_cons 9.107925e-01   p_joint 7.943925e-06

Joint ci ratio: 6.533305e-01	ci left: 5.682706e-06	ci right 1.134649e-05	k: 35	n:4290000
Cons ci ratio: 5.922916e-04	ci left: 9.105273e-01	ci right 9.110670e-01	k: 3907321	n:4290000
KS ci ratio: 1.087211e+00	ci left: 1.445356e-06	ci right 4.886145e-06	k: 12	n:4290000
IL32   4290000 perm   7685 sec   (558 perm/sec)   p_kst 2.797203e-06   p_cons 9.107974e-01   p_joint 8.158508e-06

Joint ci ratio: 6.533305e-01	ci left: 5.669491e-06	ci right 1.132010e-05	k: 35	n:4300000
Cons ci ratio: 5.915703e-04	ci left: 9.105365e-01	ci right 9.110755e-01	k: 3916467	n:4300000
KS ci ratio: 1.087211e+00	ci left: 1.441995e-06	ci right 4.874782e-06	k: 12	n:4300000
IL32   4300000 perm   7718 sec   (557 perm/sec)   p_kst 2.790698e-06   p_cons 9.108063e-01   p_joint 8.139535e-06

Joint ci ratio: 6.533305e-01	ci left: 5.656336e-06	ci right 1.129384e-05	k: 35	n:4310000
Cons ci ratio: 5.909132e-04	ci left: 9.105287e-01	ci right 9.110671e-01	k: 3925540	n:4310000
KS ci ratio: 1.087211e+00	ci left: 1.438649e-06	ci right 4.863472e-06	k: 12	n:4310000
IL32   4310000 perm   7753 sec   (556 perm/sec)   p_kst 2.784223e-06   p_cons 9.107981e-01   p_joint 8.120650e-06

Joint ci ratio: 6.533305e-01	ci left: 5.643243e-06	ci right 1.126770e-05	k: 35	n:4320000
Cons ci ratio: 5.902625e-04	ci left: 9.105197e-01	ci right 9.110575e-01	k: 3934608	n:4320000
KS ci ratio: 1.087211e+00	ci left: 1.435319e-06	ci right 4.852214e-06	k: 12	n:4320000
IL32   4320000 perm   7787 sec   (555 perm/sec)   p_kst 2.777778e-06   p_cons 9.107889e-01   p_joint 8.101852e-06

Joint ci ratio: 6.533305e-01	ci left: 5.630210e-06	ci right 1.124167e-05	k: 35	n:4330000
Cons ci ratio: 5.895301e-04	ci left: 9.105339e-01	ci right 9.110711e-01	k: 3943776	n:4330000
KS ci ratio: 1.087211e+00	ci left: 1.432004e-06	ci right 4.841008e-06	k: 12	n:4330000
IL32   4330000 perm   7821 sec   (554 perm/sec)   p_kst 2.771363e-06   p_cons 9.108028e-01   p_joint 8.083141e-06

Joint ci ratio: 6.533305e-01	ci left: 5.617237e-06	ci right 1.121577e-05	k: 35	n:4340000
Cons ci ratio: 5.888105e-04	ci left: 9.105453e-01	ci right 9.110818e-01	k: 3952932	n:4340000
KS ci ratio: 1.087211e+00	ci left: 1.428705e-06	ci right 4.829853e-06	k: 12	n:4340000
IL32   4340000 perm   7855 sec   (553 perm/sec)   p_kst 2.764977e-06   p_cons 9.108138e-01   p_joint 8.064516e-06

Joint ci ratio: 6.533306e-01	ci left: 5.604324e-06	ci right 1.118999e-05	k: 35	n:4350000
Cons ci ratio: 5.881217e-04	ci left: 9.105488e-01	ci right 9.110847e-01	k: 3962054	n:4350000
KS ci ratio: 1.087211e+00	ci left: 1.425420e-06	ci right 4.818750e-06	k: 12	n:4350000
IL32   4350000 perm   7889 sec   (551 perm/sec)   p_kst 2.758621e-06   p_cons 9.108170e-01   p_joint 8.045977e-06

Joint ci ratio: 6.533306e-01	ci left: 5.591470e-06	ci right 1.116432e-05	k: 35	n:4360000
Cons ci ratio: 5.874296e-04	ci left: 9.105539e-01	ci right 9.110891e-01	k: 3971183	n:4360000
KS ci ratio: 1.087211e+00	ci left: 1.422151e-06	ci right 4.807698e-06	k: 12	n:4360000
IL32   4360000 perm   7923 sec   (550 perm/sec)   p_kst 2.752294e-06   p_cons 9.108218e-01   p_joint 8.027523e-06

Joint ci ratio: 6.533306e-01	ci left: 5.578675e-06	ci right 1.113878e-05	k: 35	n:4370000
Cons ci ratio: 5.867309e-04	ci left: 9.105615e-01	ci right 9.110961e-01	k: 3980323	n:4370000
KS ci ratio: 1.087211e+00	ci left: 1.418897e-06	ci right 4.796696e-06	k: 12	n:4370000
IL32   4370000 perm   7957 sec   (549 perm/sec)   p_kst 2.745995e-06   p_cons 9.108291e-01   p_joint 8.009153e-06

Joint ci ratio: 6.533306e-01	ci left: 5.565938e-06	ci right 1.111335e-05	k: 35	n:4380000
Cons ci ratio: 5.860634e-04	ci left: 9.105610e-01	ci right 9.110950e-01	k: 3989428	n:4380000
KS ci ratio: 1.087211e+00	ci left: 1.415657e-06	ci right 4.785745e-06	k: 12	n:4380000
IL32   4380000 perm   7991 sec   (548 perm/sec)   p_kst 2.739726e-06   p_cons 9.108283e-01   p_joint 7.990868e-06

Joint ci ratio: 6.533306e-01	ci left: 5.553259e-06	ci right 1.108803e-05	k: 35	n:4390000
Cons ci ratio: 5.853744e-04	ci left: 9.105672e-01	ci right 9.111006e-01	k: 3998562	n:4390000
KS ci ratio: 1.087211e+00	ci left: 1.412432e-06	ci right 4.774844e-06	k: 12	n:4390000
IL32   4390000 perm   8025 sec   (547 perm/sec)   p_kst 2.733485e-06   p_cons 9.108342e-01   p_joint 7.972665e-06

Joint ci ratio: 6.533306e-01	ci left: 5.540638e-06	ci right 1.106283e-05	k: 35	n:4400000
Cons ci ratio: 5.847255e-04	ci left: 9.105629e-01	ci right 9.110957e-01	k: 4007650	n:4400000
KS ci ratio: 1.087211e+00	ci left: 1.409222e-06	ci right 4.763992e-06	k: 12	n:4400000
IL32   4400000 perm   8060 sec   (546 perm/sec)   p_kst 2.727273e-06   p_cons 9.108295e-01   p_joint 7.954545e-06

Joint ci ratio: 6.533306e-01	ci left: 5.528075e-06	ci right 1.103774e-05	k: 35	n:4410000
Cons ci ratio: 5.840820e-04	ci left: 9.105577e-01	ci right 9.110899e-01	k: 4016734	n:4410000
KS ci ratio: 1.087211e+00	ci left: 1.406027e-06	ci right 4.753189e-06	k: 12	n:4410000
IL32   4410000 perm   8094 sec   (545 perm/sec)   p_kst 2.721088e-06   p_cons 9.108240e-01   p_joint 7.936508e-06

Joint ci ratio: 6.533306e-01	ci left: 5.515568e-06	ci right 1.101277e-05	k: 35	n:4420000
Cons ci ratio: 5.834357e-04	ci left: 9.105538e-01	ci right 9.110855e-01	k: 4025824	n:4420000
KS ci ratio: 1.087211e+00	ci left: 1.402846e-06	ci right 4.742435e-06	k: 12	n:4420000
IL32   4420000 perm   8128 sec   (544 perm/sec)   p_kst 2.714932e-06   p_cons 9.108199e-01   p_joint 7.918552e-06

Joint ci ratio: 6.533306e-01	ci left: 5.503117e-06	ci right 1.098791e-05	k: 35	n:4430000
Cons ci ratio: 5.827608e-04	ci left: 9.105586e-01	ci right 9.110896e-01	k: 4034952	n:4430000
KS ci ratio: 1.087211e+00	ci left: 1.399679e-06	ci right 4.731730e-06	k: 12	n:4430000
IL32   4430000 perm   8164 sec   (543 perm/sec)   p_kst 2.708804e-06   p_cons 9.108244e-01   p_joint 7.900677e-06

Joint ci ratio: 6.533306e-01	ci left: 5.490723e-06	ci right 1.096316e-05	k: 35	n:4440000
Cons ci ratio: 5.820809e-04	ci left: 9.105654e-01	ci right 9.110958e-01	k: 4044089	n:4440000
KS ci ratio: 1.087211e+00	ci left: 1.396527e-06	ci right 4.721073e-06	k: 12	n:4440000
IL32   4440000 perm   8200 sec   (541 perm/sec)   p_kst 2.702703e-06   p_cons 9.108309e-01   p_joint 7.882883e-06

Joint ci ratio: 6.533306e-01	ci left: 5.478384e-06	ci right 1.093853e-05	k: 35	n:4450000
Cons ci ratio: 5.814123e-04	ci left: 9.105697e-01	ci right 9.110995e-01	k: 4053215	n:4450000
KS ci ratio: 1.087211e+00	ci left: 1.393388e-06	ci right 4.710464e-06	k: 12	n:4450000
IL32   4450000 perm   8234 sec   (540 perm/sec)   p_kst 2.696629e-06   p_cons 9.108348e-01   p_joint 7.865169e-06

Joint ci ratio: 6.533306e-01	ci left: 5.466101e-06	ci right 1.091400e-05	k: 35	n:4460000
Cons ci ratio: 5.807636e-04	ci left: 9.105690e-01	ci right 9.110982e-01	k: 4062319	n:4460000
KS ci ratio: 1.087211e+00	ci left: 1.390264e-06	ci right 4.699902e-06	k: 12	n:4460000
IL32   4460000 perm   8269 sec   (539 perm/sec)   p_kst 2.690583e-06   p_cons 9.108339e-01   p_joint 7.847534e-06

Joint ci ratio: 6.533306e-01	ci left: 5.453872e-06	ci right 1.088959e-05	k: 35	n:4470000
Cons ci ratio: 5.800979e-04	ci left: 9.105737e-01	ci right 9.111023e-01	k: 4071447	n:4470000
KS ci ratio: 1.087211e+00	ci left: 1.387154e-06	ci right 4.689388e-06	k: 12	n:4470000
IL32   4470000 perm   8304 sec   (538 perm/sec)   p_kst 2.684564e-06   p_cons 9.108383e-01   p_joint 7.829978e-06

Joint ci ratio: 6.722718e-01	ci left: 5.070470e-06	ci right 1.034469e-05	k: 33	n:4480000
Cons ci ratio: 5.794855e-04	ci left: 9.105641e-01	ci right 9.110921e-01	k: 4080511	n:4480000
KS ci ratio: 1.087211e+00	ci left: 1.384058e-06	ci right 4.678921e-06	k: 12	n:4480000
IL32   4480000 perm   8339 sec   (537 perm/sec)   p_kst 2.678571e-06   p_cons 9.108283e-01   p_joint 7.366071e-06

Joint ci ratio: 6.722718e-01	ci left: 5.059177e-06	ci right 1.032165e-05	k: 33	n:4490000
Cons ci ratio: 5.788289e-04	ci left: 9.105674e-01	ci right 9.110949e-01	k: 4089633	n:4490000
KS ci ratio: 1.087211e+00	ci left: 1.380975e-06	ci right 4.668500e-06	k: 12	n:4490000
IL32   4490000 perm   8375 sec   (536 perm/sec)   p_kst 2.672606e-06   p_cons 9.108314e-01   p_joint 7.349666e-06

Joint ci ratio: 6.722718e-01	ci left: 5.047934e-06	ci right 1.029871e-05	k: 33	n:4500000
Cons ci ratio: 5.781714e-04	ci left: 9.105717e-01	ci right 9.110985e-01	k: 4098759	n:4500000
KS ci ratio: 1.087211e+00	ci left: 1.377906e-06	ci right 4.658125e-06	k: 12	n:4500000
IL32   4500000 perm   8410 sec   (535 perm/sec)   p_kst 2.666667e-06   p_cons 9.108353e-01   p_joint 7.333333e-06

Joint ci ratio: 6.625983e-01	ci left: 5.220845e-06	ci right 1.053471e-05	k: 34	n:4510000
Cons ci ratio: 5.775398e-04	ci left: 9.105692e-01	ci right 9.110955e-01	k: 4107855	n:4510000
KS ci ratio: 1.087211e+00	ci left: 1.374851e-06	ci right 4.647797e-06	k: 12	n:4510000
IL32   4510000 perm   8446 sec   (534 perm/sec)   p_kst 2.660754e-06   p_cons 9.108326e-01   p_joint 7.538803e-06

Joint ci ratio: 6.625983e-01	ci left: 5.209295e-06	ci right 1.051140e-05	k: 34	n:4520000
Cons ci ratio: 5.769276e-04	ci left: 9.105619e-01	ci right 9.110876e-01	k: 4116929	n:4520000
KS ci ratio: 1.087211e+00	ci left: 1.371809e-06	ci right 4.637514e-06	k: 12	n:4520000
IL32   4520000 perm   8482 sec   (533 perm/sec)   p_kst 2.654867e-06   p_cons 9.108250e-01   p_joint 7.522124e-06

Joint ci ratio: 6.625983e-01	ci left: 5.197795e-06	ci right 1.048819e-05	k: 34	n:4530000
Cons ci ratio: 5.763493e-04	ci left: 9.105455e-01	ci right 9.110707e-01	k: 4125962	n:4530000
KS ci ratio: 1.087211e+00	ci left: 1.368781e-06	ci right 4.627277e-06	k: 12	n:4530000
IL32   4530000 perm   8517 sec   (532 perm/sec)   p_kst 2.649007e-06   p_cons 9.108084e-01   p_joint 7.505519e-06

Joint ci ratio: 6.625983e-01	ci left: 5.186346e-06	ci right 1.046509e-05	k: 34	n:4540000
Cons ci ratio: 5.757112e-04	ci left: 9.105467e-01	ci right 9.110713e-01	k: 4135074	n:4540000
KS ci ratio: 1.087211e+00	ci left: 1.365766e-06	ci right 4.617085e-06	k: 12	n:4540000
IL32   4540000 perm   8553 sec   (531 perm/sec)   p_kst 2.643172e-06   p_cons 9.108093e-01   p_joint 7.488987e-06

Joint ci ratio: 6.625983e-01	ci left: 5.174948e-06	ci right 1.044209e-05	k: 34	n:4550000
Cons ci ratio: 5.750627e-04	ci left: 9.105514e-01	ci right 9.110754e-01	k: 4144202	n:4550000
KS ci ratio: 1.087211e+00	ci left: 1.362764e-06	ci right 4.606937e-06	k: 12	n:4550000
IL32   4550000 perm   8589 sec   (530 perm/sec)   p_kst 2.637363e-06   p_cons 9.108136e-01   p_joint 7.472527e-06

Joint ci ratio: 6.625983e-01	ci left: 5.163599e-06	ci right 1.041919e-05	k: 34	n:4560000
Cons ci ratio: 5.744172e-04	ci left: 9.105558e-01	ci right 9.110792e-01	k: 4153329	n:4560000
KS ci ratio: 1.087211e+00	ci left: 1.359776e-06	ci right 4.596834e-06	k: 12	n:4560000
IL32   4560000 perm   8625 sec   (529 perm/sec)   p_kst 2.631579e-06   p_cons 9.108178e-01   p_joint 7.456140e-06

Joint ci ratio: 6.625983e-01	ci left: 5.152300e-06	ci right 1.039639e-05	k: 34	n:4570000
Cons ci ratio: 5.737939e-04	ci left: 9.105545e-01	ci right 9.110773e-01	k: 4162430	n:4570000
KS ci ratio: 1.087211e+00	ci left: 1.356801e-06	ci right 4.586776e-06	k: 12	n:4570000
IL32   4570000 perm   8661 sec   (528 perm/sec)   p_kst 2.625821e-06   p_cons 9.108162e-01   p_joint 7.439825e-06

Joint ci ratio: 6.625983e-01	ci left: 5.141051e-06	ci right 1.037369e-05	k: 34	n:4580000
Cons ci ratio: 5.731750e-04	ci left: 9.105526e-01	ci right 9.110748e-01	k: 4171528	n:4580000
KS ci ratio: 1.087211e+00	ci left: 1.353838e-06	ci right 4.576761e-06	k: 12	n:4580000
IL32   4580000 perm   8697 sec   (527 perm/sec)   p_kst 2.620087e-06   p_cons 9.108140e-01   p_joint 7.423581e-06

Joint ci ratio: 6.625983e-01	ci left: 5.129850e-06	ci right 1.035109e-05	k: 34	n:4590000
Cons ci ratio: 5.725258e-04	ci left: 9.105598e-01	ci right 9.110815e-01	k: 4180668	n:4590000
KS ci ratio: 1.087211e+00	ci left: 1.350889e-06	ci right 4.566790e-06	k: 12	n:4590000
IL32   4590000 perm   8733 sec   (526 perm/sec)   p_kst 2.614379e-06   p_cons 9.108209e-01   p_joint 7.407407e-06

Joint ci ratio: 6.625983e-01	ci left: 5.118698e-06	ci right 1.032859e-05	k: 34	n:4600000
Cons ci ratio: 5.718696e-04	ci left: 9.105696e-01	ci right 9.110907e-01	k: 4189820	n:4600000
KS ci ratio: 1.087211e+00	ci left: 1.347952e-06	ci right 4.556862e-06	k: 12	n:4600000
IL32   4600000 perm   8769 sec   (525 perm/sec)   p_kst 2.608696e-06   p_cons 9.108304e-01   p_joint 7.391304e-06

Joint ci ratio: 6.625983e-01	ci left: 5.107595e-06	ci right 1.030619e-05	k: 34	n:4610000
Cons ci ratio: 5.712256e-04	ci left: 9.105766e-01	ci right 9.110971e-01	k: 4198959	n:4610000
KS ci ratio: 1.087211e+00	ci left: 1.345028e-06	ci right 4.546977e-06	k: 12	n:4610000
IL32   4610000 perm   8805 sec   (524 perm/sec)   p_kst 2.603037e-06   p_cons 9.108371e-01   p_joint 7.375271e-06

Joint ci ratio: 6.533307e-01	ci left: 5.276798e-06	ci right 1.053603e-05	k: 35	n:4620000
Cons ci ratio: 5.705884e-04	ci left: 9.105822e-01	ci right 9.111021e-01	k: 4208092	n:4620000
KS ci ratio: 1.087211e+00	ci left: 1.342117e-06	ci right 4.537135e-06	k: 12	n:4620000
IL32   4620000 perm   8843 sec   (522 perm/sec)   p_kst 2.597403e-06   p_cons 9.108424e-01   p_joint 7.575758e-06

Joint ci ratio: 6.533307e-01	ci left: 5.265401e-06	ci right 1.051327e-05	k: 35	n:4630000
Cons ci ratio: 5.699987e-04	ci left: 9.105748e-01	ci right 9.110942e-01	k: 4217165	n:4630000
KS ci ratio: 1.087211e+00	ci left: 1.339218e-06	ci right 4.527336e-06	k: 12	n:4630000
IL32   4630000 perm   8879 sec   (521 perm/sec)   p_kst 2.591793e-06   p_cons 9.108348e-01   p_joint 7.559395e-06

Joint ci ratio: 6.533307e-01	ci left: 5.254053e-06	ci right 1.049062e-05	k: 35	n:4640000
Cons ci ratio: 5.693746e-04	ci left: 9.105778e-01	ci right 9.110967e-01	k: 4226286	n:4640000
KS ci ratio: 1.087211e+00	ci left: 1.336332e-06	ci right 4.517579e-06	k: 12	n:4640000
IL32   4640000 perm   8916 sec   (520 perm/sec)   p_kst 2.586207e-06   p_cons 9.108375e-01   p_joint 7.543103e-06

Joint ci ratio: 6.533307e-01	ci left: 5.242754e-06	ci right 1.046806e-05	k: 35	n:4650000
Cons ci ratio: 5.687713e-04	ci left: 9.105755e-01	ci right 9.110937e-01	k: 4235382	n:4650000
KS ci ratio: 1.087211e+00	ci left: 1.333458e-06	ci right 4.507863e-06	k: 12	n:4650000
IL32   4650000 perm   8952 sec   (519 perm/sec)   p_kst 2.580645e-06   p_cons 9.108348e-01   p_joint 7.526882e-06

Joint ci ratio: 6.533307e-01	ci left: 5.231504e-06	ci right 1.044559e-05	k: 35	n:4660000
Cons ci ratio: 5.681535e-04	ci left: 9.105778e-01	ci right 9.110955e-01	k: 4244500	n:4660000
KS ci ratio: 1.087211e+00	ci left: 1.330596e-06	ci right 4.498190e-06	k: 12	n:4660000
IL32   4660000 perm   8989 sec   (518 perm/sec)   p_kst 2.575107e-06   p_cons 9.108369e-01   p_joint 7.510730e-06

Joint ci ratio: 6.533307e-01	ci left: 5.220301e-06	ci right 1.042322e-05	k: 35	n:4670000
Cons ci ratio: 5.675534e-04	ci left: 9.105756e-01	ci right 9.110928e-01	k: 4253597	n:4670000
KS ci ratio: 1.087211e+00	ci left: 1.327747e-06	ci right 4.488558e-06	k: 12	n:4670000
IL32   4670000 perm   9026 sec   (517 perm/sec)   p_kst 2.569593e-06   p_cons 9.108345e-01   p_joint 7.494647e-06

Joint ci ratio: 6.533308e-01	ci left: 5.209147e-06	ci right 1.040095e-05	k: 35	n:4680000
Cons ci ratio: 5.669619e-04	ci left: 9.105716e-01	ci right 9.110882e-01	k: 4262685	n:4680000
KS ci ratio: 1.087211e+00	ci left: 1.324910e-06	ci right 4.478967e-06	k: 12	n:4680000
IL32   4680000 perm   9063 sec   (516 perm/sec)   p_kst 2.564103e-06   p_cons 9.108301e-01   p_joint 7.478632e-06

Joint ci ratio: 6.533308e-01	ci left: 5.198040e-06	ci right 1.037878e-05	k: 35	n:4690000
Cons ci ratio: 5.663358e-04	ci left: 9.105780e-01	ci right 9.110940e-01	k: 4271822	n:4690000
KS ci ratio: 1.087211e+00	ci left: 1.322085e-06	ci right 4.469417e-06	k: 12	n:4690000
IL32   4690000 perm   9100 sec   (515 perm/sec)   p_kst 2.558635e-06   p_cons 9.108362e-01   p_joint 7.462687e-06

Joint ci ratio: 6.533308e-01	ci left: 5.186980e-06	ci right 1.035669e-05	k: 35	n:4700000
Cons ci ratio: 5.657028e-04	ci left: 9.105869e-01	ci right 9.111024e-01	k: 4280971	n:4700000
KS ci ratio: 1.087211e+00	ci left: 1.319272e-06	ci right 4.459907e-06	k: 12	n:4700000
IL32   4700000 perm   9137 sec   (514 perm/sec)   p_kst 2.553191e-06   p_cons 9.108449e-01   p_joint 7.446809e-06

Joint ci ratio: 6.533308e-01	ci left: 5.175968e-06	ci right 1.033470e-05	k: 35	n:4710000
Cons ci ratio: 5.651134e-04	ci left: 9.105839e-01	ci right 9.110988e-01	k: 4290064	n:4710000
KS ci ratio: 1.087211e+00	ci left: 1.316471e-06	ci right 4.450438e-06	k: 12	n:4710000
IL32   4710000 perm   9174 sec   (513 perm/sec)   p_kst 2.547771e-06   p_cons 9.108416e-01   p_joint 7.430998e-06

Joint ci ratio: 6.823820e-01	ci left: 4.637288e-06	ci right 9.570845e-06	k: 32	n:4720000
Cons ci ratio: 5.645192e-04	ci left: 9.105828e-01	ci right 9.110972e-01	k: 4299166	n:4720000
KS ci ratio: 1.087211e+00	ci left: 1.313682e-06	ci right 4.441010e-06	k: 12	n:4720000
IL32   4720000 perm   9210 sec   (512 perm/sec)   p_kst 2.542373e-06   p_cons 9.108403e-01   p_joint 6.779661e-06

Joint ci ratio: 6.722720e-01	ci left: 4.802474e-06	ci right 9.797929e-06	k: 33	n:4730000
Cons ci ratio: 5.638923e-04	ci left: 9.105917e-01	ci right 9.111055e-01	k: 4308315	n:4730000
KS ci ratio: 1.087211e+00	ci left: 1.310904e-06	ci right 4.431621e-06	k: 12	n:4730000
IL32   4730000 perm   9247 sec   (512 perm/sec)   p_kst 2.536998e-06   p_cons 9.108488e-01   p_joint 6.976744e-06

Joint ci ratio: 6.722720e-01	ci left: 4.792343e-06	ci right 9.777258e-06	k: 33	n:4740000
Cons ci ratio: 5.633466e-04	ci left: 9.105777e-01	ci right 9.110910e-01	k: 4317356	n:4740000
KS ci ratio: 1.087211e+00	ci left: 1.308139e-06	ci right 4.422271e-06	k: 12	n:4740000
IL32   4740000 perm   9285 sec   (511 perm/sec)   p_kst 2.531646e-06   p_cons 9.108346e-01   p_joint 6.962025e-06

Joint ci ratio: 6.722720e-01	ci left: 4.782253e-06	ci right 9.756675e-06	k: 33	n:4750000
Cons ci ratio: 5.627353e-04	ci left: 9.105832e-01	ci right 9.110959e-01	k: 4326489	n:4750000
KS ci ratio: 1.087211e+00	ci left: 1.305385e-06	ci right 4.412961e-06	k: 12	n:4750000
IL32   4750000 perm   9322 sec   (510 perm/sec)   p_kst 2.526316e-06   p_cons 9.108398e-01   p_joint 6.947368e-06

Joint ci ratio: 6.722720e-01	ci left: 4.772207e-06	ci right 9.736177e-06	k: 33	n:4760000
Cons ci ratio: 5.621500e-04	ci left: 9.105817e-01	ci right 9.110939e-01	k: 4335589	n:4760000
KS ci ratio: 1.087211e+00	ci left: 1.302642e-06	ci right 4.403690e-06	k: 12	n:4760000
IL32   4760000 perm   9360 sec   (509 perm/sec)   p_kst 2.521008e-06   p_cons 9.108380e-01   p_joint 6.932773e-06

Joint ci ratio: 6.722720e-01	ci left: 4.762202e-06	ci right 9.715766e-06	k: 33	n:4770000
Cons ci ratio: 5.615614e-04	ci left: 9.105816e-01	ci right 9.110933e-01	k: 4344696	n:4770000
KS ci ratio: 1.087211e+00	ci left: 1.299912e-06	ci right 4.394458e-06	k: 12	n:4770000
IL32   4770000 perm   9398 sec   (508 perm/sec)   p_kst 2.515723e-06   p_cons 9.108377e-01   p_joint 6.918239e-06

Joint ci ratio: 6.722720e-01	ci left: 4.752239e-06	ci right 9.695440e-06	k: 33	n:4780000
Cons ci ratio: 5.609812e-04	ci left: 9.105797e-01	ci right 9.110909e-01	k: 4353794	n:4780000
KS ci ratio: 1.087211e+00	ci left: 1.297192e-06	ci right 4.385265e-06	k: 12	n:4780000
IL32   4780000 perm   9436 sec   (507 perm/sec)   p_kst 2.510460e-06   p_cons 9.108356e-01   p_joint 6.903766e-06

Joint ci ratio: 6.722720e-01	ci left: 4.742318e-06	ci right 9.675199e-06	k: 33	n:4790000
Cons ci ratio: 5.603991e-04	ci left: 9.105789e-01	ci right 9.110895e-01	k: 4362897	n:4790000
KS ci ratio: 1.087211e+00	ci left: 1.294484e-06	ci right 4.376110e-06	k: 12	n:4790000
IL32   4790000 perm   9473 sec   (506 perm/sec)   p_kst 2.505219e-06   p_cons 9.108344e-01   p_joint 6.889353e-06

Joint ci ratio: 6.722720e-01	ci left: 4.732438e-06	ci right 9.655043e-06	k: 33	n:4800000
Cons ci ratio: 5.598082e-04	ci left: 9.105812e-01	ci right 9.110913e-01	k: 4372015	n:4800000
KS ci ratio: 1.087211e+00	ci left: 1.291787e-06	ci right 4.366993e-06	k: 12	n:4800000
IL32   4800000 perm   9511 sec   (505 perm/sec)   p_kst 2.500000e-06   p_cons 9.108365e-01   p_joint 6.875000e-06

Joint ci ratio: 6.722720e-01	ci left: 4.722599e-06	ci right 9.634970e-06	k: 33	n:4810000
Cons ci ratio: 5.592470e-04	ci left: 9.105753e-01	ci right 9.110849e-01	k: 4381094	n:4810000
KS ci ratio: 1.087211e+00	ci left: 1.289101e-06	ci right 4.357914e-06	k: 12	n:4810000
IL32   4810000 perm   9549 sec   (504 perm/sec)   p_kst 2.494802e-06   p_cons 9.108304e-01   p_joint 6.860707e-06

Joint ci ratio: 6.722720e-01	ci left: 4.712802e-06	ci right 9.614980e-06	k: 33	n:4820000
Cons ci ratio: 5.586325e-04	ci left: 9.105855e-01	ci right 9.110945e-01	k: 4390250	n:4820000
KS ci ratio: 1.087211e+00	ci left: 1.286427e-06	ci right 4.348873e-06	k: 12	n:4820000
IL32   4820000 perm   9587 sec   (503 perm/sec)   p_kst 2.489627e-06   p_cons 9.108402e-01   p_joint 6.846473e-06

Joint ci ratio: 6.722720e-01	ci left: 4.703044e-06	ci right 9.595074e-06	k: 33	n:4830000
Cons ci ratio: 5.580421e-04	ci left: 9.105892e-01	ci right 9.110977e-01	k: 4399375	n:4830000
KS ci ratio: 1.087211e+00	ci left: 1.283764e-06	ci right 4.339869e-06	k: 12	n:4830000
IL32   4830000 perm   9625 sec   (502 perm/sec)   p_kst 2.484472e-06   p_cons 9.108437e-01   p_joint 6.832298e-06

Joint ci ratio: 6.722720e-01	ci left: 4.693327e-06	ci right 9.575249e-06	k: 33	n:4840000
Cons ci ratio: 5.574564e-04	ci left: 9.105921e-01	ci right 9.111000e-01	k: 4408496	n:4840000
KS ci ratio: 1.087211e+00	ci left: 1.281111e-06	ci right 4.330902e-06	k: 12	n:4840000
IL32   4840000 perm   9663 sec   (501 perm/sec)   p_kst 2.479339e-06   p_cons 9.108463e-01   p_joint 6.818182e-06

Joint ci ratio: 6.722720e-01	ci left: 4.683650e-06	ci right 9.555506e-06	k: 33	n:4850000
Cons ci ratio: 5.568669e-04	ci left: 9.105966e-01	ci right 9.111040e-01	k: 4417625	n:4850000
KS ci ratio: 1.087211e+00	ci left: 1.278470e-06	ci right 4.321972e-06	k: 12	n:4850000
IL32   4850000 perm   9702 sec   (500 perm/sec)   p_kst 2.474227e-06   p_cons 9.108505e-01   p_joint 6.804124e-06

Joint ci ratio: 6.722720e-01	ci left: 4.674013e-06	ci right 9.535845e-06	k: 33	n:4860000
Cons ci ratio: 5.562489e-04	ci left: 9.106099e-01	ci right 9.111168e-01	k: 4426797	n:4860000
KS ci ratio: 1.087211e+00	ci left: 1.275839e-06	ci right 4.313079e-06	k: 12	n:4860000
IL32   4860000 perm   9741 sec   (499 perm/sec)   p_kst 2.469136e-06   p_cons 9.108636e-01   p_joint 6.790123e-06

Joint ci ratio: 6.722720e-01	ci left: 4.664415e-06	ci right 9.516264e-06	k: 33	n:4870000
Cons ci ratio: 5.556604e-04	ci left: 9.106152e-01	ci right 9.111215e-01	k: 4435930	n:4870000
KS ci ratio: 1.087211e+00	ci left: 1.273219e-06	ci right 4.304223e-06	k: 12	n:4870000
IL32   4870000 perm   9781 sec   (498 perm/sec)   p_kst 2.464066e-06   p_cons 9.108686e-01   p_joint 6.776181e-06

Joint ci ratio: 6.722720e-01	ci left: 4.654857e-06	ci right 9.496763e-06	k: 33	n:4880000
Cons ci ratio: 5.550667e-04	ci left: 9.106225e-01	ci right 9.111283e-01	k: 4445073	n:4880000
KS ci ratio: 1.087211e+00	ci left: 1.270610e-06	ci right 4.295403e-06	k: 12	n:4880000
IL32   4880000 perm   9820 sec   (497 perm/sec)   p_kst 2.459016e-06   p_cons 9.108756e-01   p_joint 6.762295e-06

Joint ci ratio: 6.722720e-01	ci left: 4.645338e-06	ci right 9.477343e-06	k: 33	n:4890000
Cons ci ratio: 5.545141e-04	ci left: 9.106183e-01	ci right 9.111236e-01	k: 4454160	n:4890000
KS ci ratio: 1.087211e+00	ci left: 1.268012e-06	ci right 4.286619e-06	k: 12	n:4890000
IL32   4890000 perm   9859 sec   (496 perm/sec)   p_kst 2.453988e-06   p_cons 9.108712e-01   p_joint 6.748466e-06

Joint ci ratio: 6.722721e-01	ci left: 4.635858e-06	ci right 9.458001e-06	k: 33	n:4900000
Cons ci ratio: 5.539234e-04	ci left: 9.106257e-01	ci right 9.111305e-01	k: 4463304	n:4900000
KS ci ratio: 1.087211e+00	ci left: 1.265424e-06	ci right 4.277871e-06	k: 12	n:4900000
IL32   4900000 perm   9897 sec   (495 perm/sec)   p_kst 2.448980e-06   p_cons 9.108784e-01   p_joint 6.734694e-06

Joint ci ratio: 6.722721e-01	ci left: 4.626416e-06	ci right 9.438739e-06	k: 33	n:4910000
Cons ci ratio: 5.533811e-04	ci left: 9.106195e-01	ci right 9.111238e-01	k: 4472381	n:4910000
KS ci ratio: 1.087211e+00	ci left: 1.262847e-06	ci right 4.269158e-06	k: 12	n:4910000
IL32   4910000 perm   9936 sec   (494 perm/sec)   p_kst 2.443992e-06   p_cons 9.108719e-01   p_joint 6.720978e-06

Joint ci ratio: 6.722721e-01	ci left: 4.617013e-06	ci right 9.419554e-06	k: 33	n:4920000
Cons ci ratio: 5.528203e-04	ci left: 9.106192e-01	ci right 9.111230e-01	k: 4481487	n:4920000
KS ci ratio: 1.087211e+00	ci left: 1.260280e-06	ci right 4.260481e-06	k: 12	n:4920000
IL32   4920000 perm   9975 sec   (493 perm/sec)   p_kst 2.439024e-06   p_cons 9.108713e-01   p_joint 6.707317e-06

Joint ci ratio: 6.722721e-01	ci left: 4.607648e-06	ci right 9.400448e-06	k: 33	n:4930000
Cons ci ratio: 5.522737e-04	ci left: 9.106153e-01	ci right 9.111185e-01	k: 4490575	n:4930000
KS ci ratio: 1.087211e+00	ci left: 1.257724e-06	ci right 4.251839e-06	k: 12	n:4930000
IL32   4930000 perm   10014 sec   (492 perm/sec)   p_kst 2.434077e-06   p_cons 9.108671e-01   p_joint 6.693712e-06

Joint ci ratio: 6.625985e-01	ci left: 4.766399e-06	ci right 9.617718e-06	k: 34	n:4940000
Cons ci ratio: 5.517410e-04	ci left: 9.106077e-01	ci right 9.111104e-01	k: 4499645	n:4940000
KS ci ratio: 1.047662e+00	ci left: 1.401206e-06	ci right 4.500076e-06	k: 13	n:4940000
IL32   4940000 perm   10053 sec   (491 perm/sec)   p_kst 2.631579e-06   p_cons 9.108593e-01   p_joint 6.882591e-06

Joint ci ratio: 6.625985e-01	ci left: 4.756770e-06	ci right 9.598288e-06	k: 34	n:4950000
Cons ci ratio: 5.511715e-04	ci left: 9.106115e-01	ci right 9.111137e-01	k: 4508771	n:4950000
KS ci ratio: 1.047662e+00	ci left: 1.398375e-06	ci right 4.490985e-06	k: 13	n:4950000
IL32   4950000 perm   10092 sec   (490 perm/sec)   p_kst 2.626263e-06   p_cons 9.108628e-01   p_joint 6.868687e-06

Joint ci ratio: 6.625985e-01	ci left: 4.747180e-06	ci right 9.578937e-06	k: 34	n:4960000
Cons ci ratio: 5.506044e-04	ci left: 9.106150e-01	ci right 9.111167e-01	k: 4517896	n:4960000
KS ci ratio: 1.047662e+00	ci left: 1.395556e-06	ci right 4.481930e-06	k: 13	n:4960000
IL32   4960000 perm   10131 sec   (490 perm/sec)   p_kst 2.620968e-06   p_cons 9.108661e-01   p_joint 6.854839e-06

Joint ci ratio: 6.625985e-01	ci left: 4.737628e-06	ci right 9.559663e-06	k: 34	n:4970000
Cons ci ratio: 5.500104e-04	ci left: 9.106270e-01	ci right 9.111282e-01	k: 4527063	n:4970000
KS ci ratio: 1.047662e+00	ci left: 1.392748e-06	ci right 4.472913e-06	k: 13	n:4970000
IL32   4970000 perm   10170 sec   (489 perm/sec)   p_kst 2.615694e-06   p_cons 9.108779e-01   p_joint 6.841046e-06

Joint ci ratio: 6.625985e-01	ci left: 4.728115e-06	ci right 9.540467e-06	k: 34	n:4980000
Cons ci ratio: 5.494795e-04	ci left: 9.106209e-01	ci right 9.111216e-01	k: 4536140	n:4980000
KS ci ratio: 1.047662e+00	ci left: 1.389951e-06	ci right 4.463931e-06	k: 13	n:4980000
IL32   4980000 perm   10210 sec   (488 perm/sec)   p_kst 2.610442e-06   p_cons 9.108715e-01   p_joint 6.827309e-06

Joint ci ratio: 6.625985e-01	ci left: 4.718639e-06	ci right 9.521348e-06	k: 34	n:4990000
Cons ci ratio: 5.489406e-04	ci left: 9.106176e-01	ci right 9.111178e-01	k: 4545231	n:4990000
KS ci ratio: 1.047662e+00	ci left: 1.387166e-06	ci right 4.454985e-06	k: 13	n:4990000
IL32   4990000 perm   10248 sec   (487 perm/sec)   p_kst 2.605210e-06   p_cons 9.108679e-01   p_joint 6.813627e-06

Joint ci ratio: 6.625986e-01	ci left: 4.709202e-06	ci right 9.502306e-06	k: 34	n:5000000
Cons ci ratio: 5.483804e-04	ci left: 9.106211e-01	ci right 9.111208e-01	k: 4554356	n:5000000
KS ci ratio: 1.047662e+00	ci left: 1.384391e-06	ci right 4.446075e-06	k: 13	n:5000000
IL32   5000000 perm   10287 sec   (486 perm/sec)   p_kst 2.600000e-06   p_cons 9.108712e-01   p_joint 6.800000e-06

Outputting figure to mutsig2_images.part000000000085/IL32.3_591_5000000_2.6e-06_0.91087_6.8e-06.png
                gene_name: IL32
               theta_stop: 1.0 
                    nperm: 5000000 
                     p_ks: 2.60e-06 
        ci_ks_bounds_left: 1.38e-06 
       ci_ks_bounds_right: 4.45e-06 
                   p_cons: 0.91 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.91 
                  p_joint: 6.80e-06 
     ci_joint_bounds_left: 4.71e-06 
    ci_joint_bounds_right: 9.50e-06 

Current progress: 17 percent done.
IL7R
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.784639e-02	ci left: 3.055038e-01	ci right 3.238042e-01	k: 3146	n:10000
Cons ci ratio: 8.135889e-02	ci left: 1.806791e-01	ci right 1.961029e-01	k: 1883	n:10000
KS ci ratio: 5.230103e-02	ci left: 3.501865e-01	ci right 3.690954e-01	k: 3596	n:10000
IL7R   10000 perm   1 sec   (6726 perm/sec)   p_kst 3.596000e-01   p_cons 1.883000e-01   p_joint 3.146000e-01

Outputting figure to mutsig2_images.part000000000085/IL7R.2_1412_10000_0.3596_0.1883_0.3146.png
                gene_name: IL7R
               theta_stop: 0.081 
                    nperm: 10000 
                     p_ks: 0.36 
        ci_ks_bounds_left: 0.35 
       ci_ks_bounds_right: 0.37 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.20 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.31 
    ci_joint_bounds_right: 0.32 

Current progress: 33 percent done.
IMPDH2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.496762e-02	ci left: 8.661108e-01	ci right 8.792713e-01	k: 8728	n:10000
Cons ci ratio: 2.366395e-02	ci left: 7.241112e-01	ci right 7.415529e-01	k: 7329	n:10000
KS ci ratio: 6.687871e-02	ci left: 2.470728e-01	ci right 2.642697e-01	k: 2556	n:10000
IMPDH2   10000 perm   2 sec   (6500 perm/sec)   p_kst 2.556000e-01   p_cons 7.329000e-01   p_joint 8.728000e-01

Outputting figure to mutsig2_images.part000000000085/IMPDH2.2_1601_10000_0.2556_0.7329_0.8728.png
                gene_name: IMPDH2
               theta_stop: 0.067 
                    nperm: 10000 
                     p_ks: 0.26 
        ci_ks_bounds_left: 0.25 
       ci_ks_bounds_right: 0.26 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.72 
     ci_cons_bounds_right: 0.74 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.87 
    ci_joint_bounds_right: 0.88 

Current progress: 50 percent done.
INHBA
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.866854e-02	ci left: 1.910164e-01	ci right 2.067594e-01	k: 1988	n:10000
Cons ci ratio: 4.597208e-02	ci left: 4.111978e-01	ci right 4.306483e-01	k: 4209	n:10000
KS ci ratio: 1.090626e-01	ci left: 1.081269e-01	ci right 1.206987e-01	k: 1143	n:10000
INHBA   10000 perm   2 sec   (6658 perm/sec)   p_kst 1.143000e-01   p_cons 4.209000e-01   p_joint 1.988000e-01

Joint ci ratio: 8.436352e-03	ci left: 9.113045e-01	ci right 9.190743e-01	k: 18305	n:20000
Cons ci ratio: 3.219211e-02	ci left: 4.188336e-01	ci right 4.325880e-01	k: 8514	n:20000
KS ci ratio: 7.789121e-02	ci left: 1.080049e-01	ci right 1.168081e-01	k: 2247	n:20000
INHBA   20000 perm   3 sec   (5967 perm/sec)   p_kst 1.123500e-01   p_cons 4.257000e-01   p_joint 9.152500e-01

Outputting figure to mutsig2_images.part000000000085/INHBA.2_1289_20000_0.11235_0.4257_0.91525.png
                gene_name: INHBA
               theta_stop: 0.078 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.43 
      ci_cons_bounds_left: 0.42 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.92 
     ci_joint_bounds_left: 0.91 
    ci_joint_bounds_right: 0.92 

Current progress: 67 percent done.
INPP5F
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.008231e-01	ci left: 3.300513e-02	ci right 4.046787e-02	k: 366	n:10000
Cons ci ratio: 2.142107e-01	ci left: 2.892165e-02	ci right 3.595419e-02	k: 323	n:10000
KS ci ratio: 8.409273e-02	ci left: 1.709408e-01	ci right 1.860470e-01	k: 1784	n:10000
INPP5F   10000 perm   2 sec   (5617 perm/sec)   p_kst 1.784000e-01   p_cons 3.230000e-02   p_joint 3.660000e-02

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 1.178121e-01	ci left: 4.935201e-02	ci right 5.557892e-02	k: 1048	n:20000
KS ci ratio: 5.910097e-02	ci left: 1.749444e-01	ci right 1.856487e-01	k: 3605	n:20000
INPP5F   20000 perm   4 sec   (4866 perm/sec)   p_kst 1.802500e-01   p_cons 5.240000e-02   p_joint 1

Joint ci ratio: 1.306580e-04	ci left: 9.998770e-01	ci right 1	k: 30000	n:30000
Cons ci ratio: 9.793022e-02	ci left: 4.821186e-02	ci right 5.320894e-02	k: 1520	n:30000
KS ci ratio: 4.806635e-02	ci left: 1.770868e-01	ci right 1.858416e-01	k: 5443	n:30000
INPP5F   30000 perm   6 sec   (4741 perm/sec)   p_kst 1.814333e-01   p_cons 5.066667e-02   p_joint 1

Outputting figure to mutsig2_images.part000000000085/INPP5F.2_3479_30000_0.18143_0.050667_1.png
                gene_name: INPP5F
               theta_stop: 0.098 
                    nperm: 30000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.18 
       ci_ks_bounds_right: 0.19 
                   p_cons: 0.051 
      ci_cons_bounds_left: 0.048 
     ci_cons_bounds_right: 0.053 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
INTS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.435667e-02	ci left: 5.557167e-01	ci right 5.752451e-01	k: 5655	n:10000
Cons ci ratio: 7.432953e-02	ci left: 2.094474e-01	ci right 2.257174e-01	k: 2175	n:10000
KS ci ratio: 4.753408e-02	ci left: 3.950588e-01	ci right 4.143968e-01	k: 4047	n:10000
INTS1   10000 perm   2 sec   (4539 perm/sec)   p_kst 4.047000e-01   p_cons 2.175000e-01   p_joint 5.655000e-01

Outputting figure to mutsig2_images.part000000000085/INTS1.2_6761_10000_0.4047_0.2175_0.5655.png
                gene_name: INTS1
               theta_stop: 0.074 
                    nperm: 10000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.22 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.23 
                  p_joint: 0.57 
     ci_joint_bounds_left: 0.56 
    ci_joint_bounds_right: 0.58 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000085
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 85 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1714>
Subject: Job 8704242: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1714>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000086> was used as the working directory.
Started at Thu Nov 15 19:33:43 2012
Results reported at Thu Nov 15 19:36:09 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000086.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000086.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 86  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000086.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    168.97 sec.
    Max Memory :      5963 MB
    Max Swap   :      8536 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
86
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 86
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 86: processing genes 7691 - 7780
Calculating significance of each gene.
Using projection method.
7691	INTS4	1
7692	INTS5	1
7693	INTS6	1
7694	INTS7	1
7695	INTS8	1
7696	INTS9	2.963301e-01
In gene INTU the following bins exceed PROBCAP:
    THCA-EM-A3AN-TP	categ 6	N = 2881    n = 1	mu =   6.67e-08
7697	INTU	2.504664e-02
7698	INVS	1
7699	IP6K1	1
7700	IP6K2	1
7701	IP6K3	1
7702	IPCEF1	1
7703	IPMK	5.012576e-02
7704	IPO11	1.004679e-01
7705	IPO13	1
7706	IPO4	1
7707	IPO5	1
7708	IPO7	1
7709	IPO8	1
7710	IPO9	1
7711	IPP	1
7712	IPPK	1
7713	IQCA1	1
7714	IQCB1	1
7715	IQCC	1
7716	IQCD	1
7717	IQCE	1
7718	IQCF1	1
7719	IQCF2	1
7720	IQCF3	1
7721	IQCG	1
7722	IQCH	1
7723	IQCJ	1
7724	IQCK	1
7725	IQGAP1	1.907615e-01
7726	IQGAP2	1
7727	IQGAP3	1
7728	IQSEC1	1
7729	IQSEC2	1.880777e-01
7730	IQSEC3	1
7731	IQUB	1
7732	IRAK1	1
7733	IRAK1BP1	1
7734	IRAK2	2.342007e-01
7735	IRAK3	3.676443e-02
7736	IRAK4	1
7737	IREB2	3.153092e-01
7738	IRF1	1.506719e-01
7739	IRF2	1
7740	IRF2BP1	1
7741	IRF2BP2	1
In gene IRF3 the following bins exceed PROBCAP:
    THCA-FE-A23A-TP	categ 6	N = 1177    n = 1	mu =   6.85e-08
7742	IRF3	3.947094e-02
7743	IRF4	1.718478e-01
7744	IRF5	2.017329e-01
7745	IRF6	1
7746	IRF7	1
7747	IRF8	1
7748	IRF9	1
7749	IRGC	1
7750	IRGQ	1
7751	IRS1	1
7752	IRS2	1
In gene IRS4 the following bins exceed PROBCAP:
    THCA-EL-A3CM-TP	categ 6	N = 3764    n = 1	mu =   1.06e-07
7753	IRS4	2.512005e-01
7754	IRX1	1
7755	IRX2	1.184403e-01
7756	IRX3	4.602480e-02
7757	IRX4	1
7758	IRX5	1
7759	IRX6	1
7760	ISCA1	1
7761	ISCA1P1	1
7762	ISCA2	1
7763	ISCU	1
7764	ISG15	1
7765	ISG20	1
7766	ISG20L2	1
7767	ISL1	1
7768	ISL2	1
7769	ISLR	1
7770	ISLR2	1
7771	ISM1	6.438604e-02
7772	ISM2	1
7773	ISOC1	1
7774	ISOC2	7.367491e-02
7775	ISPD	1
7776	ISX	1
7777	ISY1	1
In gene ISYNA1 the following bins exceed PROBCAP:
    THCA-ET-A3BU-TP	categ 6	N = 1197    n = 1	mu =   3.49e-08
7778	ISYNA1	3.973308e-03
7779	ITCH	1
7780	ITFG1	1
Done

Running MutSig 2:
Scatter job 86: processing genes 7691 - 7780
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
INTU
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.351485e-02	ci left: 3.397522e-01	ci right 3.585358e-01	k: 3491	n:10000
KS ci ratio: 1.444432e-02	ci left: 8.739813e-01	ci right 8.867962e-01	k: 8805	n:10000
INTU   10000 perm   2 sec   (5678 perm/sec)   p_kst 8.805000e-01   p_cons 3.491000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000086/INTU.2_2893_10000_0.8805_0.3491_1.png
                gene_name: INTU
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.89 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
IQGAP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.319143e-02	ci left: 2.146757e-01	ci right 2.310860e-01	k: 2228	n:10000
Cons ci ratio: 4.439572e-02	ci left: 4.282451e-01	ci right 4.477911e-01	k: 4380	n:10000
KS ci ratio: 8.686029e-02	ci left: 1.618004e-01	ci right 1.765928e-01	k: 1691	n:10000
IQGAP1   10000 perm   2 sec   (5062 perm/sec)   p_kst 1.691000e-01   p_cons 4.380000e-01   p_joint 2.228000e-01

Outputting figure to mutsig2_images.part000000000086/IQGAP1.2_5126_10000_0.1691_0.438_0.2228.png
                gene_name: IQGAP1
               theta_stop: 0.087 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.23 

Current progress: 50 percent done.
IRS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.787610e-02	ci left: 5.072521e-01	ci right 5.269379e-01	k: 5171	n:10000
Cons ci ratio: 2.174454e-02	ci left: 7.562597e-01	ci right 7.729859e-01	k: 7647	n:10000
KS ci ratio: 8.745193e-02	ci left: 1.599340e-01	ci right 1.746603e-01	k: 1672	n:10000
IRS1   10000 perm   2 sec   (5682 perm/sec)   p_kst 1.672000e-01   p_cons 7.647000e-01   p_joint 5.171000e-01

Outputting figure to mutsig2_images.part000000000086/IRS1.2_3733_10000_0.1672_0.7647_0.5171.png
                gene_name: IRS1
               theta_stop: 0.087 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.17 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.76 
     ci_cons_bounds_right: 0.77 
                  p_joint: 0.52 
     ci_joint_bounds_left: 0.51 
    ci_joint_bounds_right: 0.53 

Current progress: 75 percent done.
ISYNA1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.136961e-03	ci left: 9.643613e-01	ci right 9.713627e-01	k: 9680	n:10000
Cons ci ratio: 1.236221e-02	ci left: 9.038097e-01	ci right 9.151504e-01	k: 9096	n:10000
KS ci ratio: 5.667384e-02	ci left: 3.143335e-01	ci right 3.327693e-01	k: 3235	n:10000
ISYNA1   10000 perm   2 sec   (6012 perm/sec)   p_kst 3.235000e-01   p_cons 9.096000e-01   p_joint 9.680000e-01

Outputting figure to mutsig2_images.part000000000086/ISYNA1.2_1717_10000_0.3235_0.9096_0.968.png
                gene_name: ISYNA1
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.91 
      ci_cons_bounds_left: 0.90 
     ci_cons_bounds_right: 0.92 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.96 
    ci_joint_bounds_right: 0.97 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000086
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 86 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1709>
Subject: Job 8704243: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1709>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000087> was used as the working directory.
Started at Thu Nov 15 19:33:43 2012
Results reported at Thu Nov 15 19:36:37 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000087.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000087.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 87  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000087.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    198.50 sec.
    Max Memory :      6020 MB
    Max Swap   :      8507 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
87
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 87
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 87: processing genes 7781 - 7870
Calculating significance of each gene.
Using projection method.
7781	ITFG2	1
7782	ITFG3	1
7783	ITGA1	1
7784	ITGA10	1.357318e-01
7785	ITGA11	1
7786	ITGA2	1
7787	ITGA2B	1
7788	ITGA3	8.067680e-02
7789	ITGA4	1
7790	ITGA5	1
7791	ITGA6	1
7792	ITGA7	1
7793	ITGA8	1
7794	ITGA9	1
7795	ITGAD	1.197019e-01
7796	ITGAE	1
7797	ITGAL	2.827484e-03
7798	ITGAM	3.628523e-02
7799	ITGAV	1
7800	ITGAX	1
7801	ITGB1	5.548847e-02
7802	ITGB1BP1	1
7803	ITGB1BP2	1
7804	ITGB1BP3	1
7805	ITGB2	1
7806	ITGB3	2.540435e-01
7807	ITGB3BP	1
7808	ITGB4	5.213801e-01
7809	ITGB5	1
7810	ITGB6	1
7811	ITGB7	1
7812	ITGB8	2.950453e-01
7813	ITGBL1	1
7814	ITIH1	2.047777e-01
7815	ITIH2	1
7816	ITIH3	1
7817	ITIH4	1
7818	ITIH5	1
7819	ITIH5L	7.837674e-02
7820	ITK	1
7821	ITLN1	1
7822	ITLN2	1
7823	ITM2A	1
7824	ITM2B	1
7825	ITM2C	3.052834e-02
7826	ITPA	1
7827	ITPK1	1
7828	ITPKA	1
7829	ITPKB	1
7830	ITPKC	1
7831	ITPR1	3.382694e-01
7832	ITPR2	1.187354e-02
7833	ITPR3	1
7834	ITPRIP	1
7835	ITPRIPL1	1
7836	ITPRIPL2	1
7837	ITSN1	1
7838	ITSN2	1
7839	IVD	1
7840	IVL	1
7841	IVNS1ABP	1
7842	IWS1	1
7843	IYD	1
7844	IZUMO1	1
7845	JAG1	1
7846	JAG2	1
7847	JAGN1	1
7848	JAK1	1.554050e-01
7849	JAK2	1
7850	JAK3	1
7851	JAKMIP1	1
7852	JAKMIP2	2.974234e-01
7853	JAKMIP3	1
7854	JAM2	1
7855	JAM3	1
7856	JARID2	1
7857	JAZF1	1
7858	JDP2	1
7859	JHDM1D	1
7860	JKAMP	1
7861	JMJD1C	3.033053e-02
7862	JMJD4	1
7863	JMJD5	1
7864	JMJD6	1
7865	JMJD7	1
7866	JMJD7-PLA2G4B	1
7867	JMJD8	1
7868	JMY	1
7869	JOSD1	1
7870	JOSD2	1
Done

Running MutSig 2:
Scatter job 87: processing genes 7781 - 7870
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ITGAL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.252190e-02	ci left: 2.178334e-01	ci right 2.343265e-01	k: 2260	n:10000
Cons ci ratio: 1.209850e-01	ci left: 8.922438e-02	ci right 1.008128e-01	k: 949	n:10000
KS ci ratio: 5.623661e-02	ci left: 3.177077e-01	ci right 3.361932e-01	k: 3269	n:10000
ITGAL   10000 perm   2 sec   (4912 perm/sec)   p_kst 3.269000e-01   p_cons 9.490000e-02   p_joint 2.260000e-01

Joint ci ratio: 4.788192e-02	ci left: 2.449528e-01	ci right 2.570197e-01	k: 5019	n:20000
Cons ci ratio: 8.166503e-02	ci left: 9.906579e-02	ci right 1.075499e-01	k: 2065	n:20000
KS ci ratio: 3.967965e-02	ci left: 3.213943e-01	ci right 3.344558e-01	k: 6558	n:20000
ITGAL   20000 perm   6 sec   (3187 perm/sec)   p_kst 3.279000e-01   p_cons 1.032500e-01   p_joint 2.509500e-01

Outputting figure to mutsig2_images.part000000000087/ITGAL.4_3637_20000_0.3279_0.10325_0.25095.png
                gene_name: ITGAL
               theta_stop: 0.082 
                    nperm: 20000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.10 
      ci_cons_bounds_left: 0.099 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.26 

Current progress: 11 percent done.
ITPR2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.456068e-02	ci left: 8.722429e-01	ci right 8.851355e-01	k: 8788	n:10000
KS ci ratio: 2.229388e-02	ci left: 7.470537e-01	ci right 7.639972e-01	k: 7556	n:10000
ITPR2   10000 perm   2 sec   (4135 perm/sec)   p_kst 7.556000e-01   p_cons 8.788000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000087/ITPR2.4_8334_10000_0.7556_0.8788_1.png
                gene_name: ITPR2
               theta_stop: 0.022 
                    nperm: 10000 
                     p_ks: 0.76 
        ci_ks_bounds_left: 0.75 
       ci_ks_bounds_right: 0.76 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.89 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 22 percent done.
JMJD1C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.628204e-02	ci left: 2.008694e-01	ci right 2.169006e-01	k: 2088	n:10000
Cons ci ratio: 2.850386e-02	ci left: 6.446834e-01	ci right 6.634268e-01	k: 6541	n:10000
KS ci ratio: 1.338395e-01	ci left: 7.368948e-02	ci right 8.435729e-02	k: 789	n:10000
JMJD1C   10000 perm   2 sec   (4010 perm/sec)   p_kst 7.890000e-02   p_cons 6.541000e-01   p_joint 2.088000e-01

Joint ci ratio: 5.719380e-02	ci left: 1.847318e-01	ci right 1.956584e-01	k: 3803	n:20000
Cons ci ratio: 1.992057e-02	ci left: 6.527842e-01	ci right 6.659694e-01	k: 13188	n:20000
KS ci ratio: 9.268048e-02	ci left: 7.828247e-02	ci right 8.593954e-02	k: 1641	n:20000
JMJD1C   20000 perm   5 sec   (3680 perm/sec)   p_kst 8.205000e-02   p_cons 6.594000e-01   p_joint 1.901500e-01

Outputting figure to mutsig2_images.part000000000087/JMJD1C.4_7727_20000_0.08205_0.6594_0.19015.png
                gene_name: JMJD1C
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.082 
        ci_ks_bounds_left: 0.078 
       ci_ks_bounds_right: 0.086 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.65 
     ci_cons_bounds_right: 0.67 
                  p_joint: 0.19 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.20 

Current progress: 33 percent done.
ITGA3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.712230e-02	ci left: 3.992419e-01	ci right 4.186112e-01	k: 4089	n:10000
Cons ci ratio: 4.319882e-02	ci left: 4.417117e-01	ci right 4.613165e-01	k: 4515	n:10000
KS ci ratio: 9.316556e-02	ci left: 1.433484e-01	ci right 1.574560e-01	k: 1503	n:10000
ITGA3   10000 perm   2 sec   (5529 perm/sec)   p_kst 1.503000e-01   p_cons 4.515000e-01   p_joint 4.089000e-01

Outputting figure to mutsig2_images.part000000000087/ITGA3.2_3416_10000_0.1503_0.4515_0.4089.png
                gene_name: ITGA3
               theta_stop: 0.093 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.41 
     ci_joint_bounds_left: 0.40 
    ci_joint_bounds_right: 0.42 

Current progress: 44 percent done.
ITGAD
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.635179e-02	ci left: 3.168145e-01	ci right 3.352869e-01	k: 3260	n:10000
KS ci ratio: 3.162458e-02	ci left: 5.960420e-01	ci right 6.152964e-01	k: 6057	n:10000
ITGAD   10000 perm   2 sec   (5485 perm/sec)   p_kst 6.057000e-01   p_cons 3.260000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000087/ITGAD.2_3606_10000_0.6057_0.326_1.png
                gene_name: ITGAD
               theta_stop: 0.056 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.33 
      ci_cons_bounds_left: 0.32 
     ci_cons_bounds_right: 0.34 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 56 percent done.
ITGAM
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.898779e-03	ci left: 9.881795e-01	ci right 9.921271e-01	k: 9903	n:10000
KS ci ratio: 2.117017e-02	ci left: 7.658760e-01	ci right 7.823640e-01	k: 7742	n:10000
ITGAM   10000 perm   2 sec   (5643 perm/sec)   p_kst 7.742000e-01   p_cons 9.903000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000087/ITGAM.2_3582_10000_0.7742_0.9903_1.png
                gene_name: ITGAM
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 0.99 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
ITGB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.926357e-02	ci left: 6.326140e-01	ci right 6.515032e-01	k: 6421	n:10000
Cons ci ratio: 1.374621e-01	ci left: 7.000876e-02	ci right 8.044030e-02	k: 751	n:10000
KS ci ratio: 2.926357e-02	ci left: 6.326140e-01	ci right 6.515032e-01	k: 6421	n:10000
ITGB1   10000 perm   2 sec   (5833 perm/sec)   p_kst 6.421000e-01   p_cons 7.510000e-02   p_joint 6.421000e-01

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 9.773037e-02	ci left: 7.080016e-02	ci right 7.812413e-02	k: 1488	n:20000
KS ci ratio: 2.082637e-02	ci left: 6.324494e-01	ci right 6.458101e-01	k: 12783	n:20000
ITGB1   20000 perm   4 sec   (5253 perm/sec)   p_kst 6.391500e-01   p_cons 7.440000e-02   p_joint 1

Outputting figure to mutsig2_images.part000000000087/ITGB1.2_2695_20000_0.63915_0.0744_1.png
                gene_name: ITGB1
               theta_stop: 0.098 
                    nperm: 20000 
                     p_ks: 0.64 
        ci_ks_bounds_left: 0.63 
       ci_ks_bounds_right: 0.65 
                   p_cons: 0.074 
      ci_cons_bounds_left: 0.071 
     ci_cons_bounds_right: 0.078 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 78 percent done.
ITIH5L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.553891e-02	ci left: 6.929276e-01	ci right 7.109546e-01	k: 7020	n:10000
KS ci ratio: 4.186327e-02	ci left: 4.572822e-01	ci right 4.769370e-01	k: 4671	n:10000
ITIH5L   10000 perm   2 sec   (5101 perm/sec)   p_kst 4.671000e-01   p_cons 7.020000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000087/ITIH5L.2_3994_10000_0.4671_0.702_1.png
                gene_name: ITIH5L
               theta_stop: 0.042 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.70 
      ci_cons_bounds_left: 0.69 
     ci_cons_bounds_right: 0.71 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 89 percent done.
ITPR1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.444083e-02	ci left: 4.277464e-01	ci right 4.472900e-01	k: 4375	n:10000
KS ci ratio: 2.150284e-02	ci left: 7.603080e-01	ci right 7.769353e-01	k: 7687	n:10000
ITPR1   10000 perm   2 sec   (4164 perm/sec)   p_kst 7.687000e-01   p_cons 4.375000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000087/ITPR1.2_8517_10000_0.7687_0.4375_1.png
                gene_name: ITPR1
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000087
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 87 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1654>
Subject: Job 8704244: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1654>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000088> was used as the working directory.
Started at Thu Nov 15 19:33:43 2012
Results reported at Thu Nov 15 19:35:58 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000088.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000088.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 88  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000088.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    157.81 sec.
    Max Memory :      5676 MB
    Max Swap   :      8434 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
88
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 88
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 88: processing genes 7871 - 7961
Calculating significance of each gene.
Using projection method.
7871	JPH1	1
7872	JPH2	1
7873	JPH3	1
7874	JPH4	1
7875	JRK	1
7876	JRKL	1
7877	JSRP1	1
7878	JTB	1
7879	JUB	5.020931e-02
7880	JUN	1.571609e-01
7881	JUNB	2.375031e-02
7882	JUND	1
7883	JUP	1
7884	KAAG1	1
7885	KAL1	1
7886	KALRN	1
7887	KANK1	1
7888	KANK2	2.877079e-01
7889	KANK3	1
7890	KANK4	1.483715e-01
7891	KARS	1.276452e-01
7892	KAT2A	1.169043e-01
7893	KAT2B	6.726821e-02
7894	KAT5	1
7895	KATNA1	1
7896	KATNAL1	1
7897	KATNAL2	1
7898	KATNB1	1
7899	KAZ	1
7900	KAZALD1	1
7901	KBTBD10	1
7902	KBTBD12	1
7903	KBTBD2	1
7904	KBTBD3	1.832524e-01
7905	KBTBD4	1.980630e-01
7906	KBTBD5	1.605728e-01
7907	KBTBD6	1
7908	KBTBD7	1
7909	KBTBD8	1.180745e-01
7910	KCMF1	1
7911	KCNA1	1
7912	KCNA10	1
7913	KCNA2	1
7914	KCNA3	1
7915	KCNA4	1.816731e-01
7916	KCNA5	3.267050e-02
7917	KCNA6	1
7918	KCNA7	1.165838e-01
7919	KCNAB1	1
7920	KCNAB2	1
7921	KCNAB3	1
7922	KCNB1	1
7923	KCNB2	2.996582e-01
7924	KCNC1	1
7925	KCNC2	1
7926	KCNC3	1
7927	KCNC4	3.169647e-01
7928	KCND1	1
7929	KCND2	1.917463e-01
7930	KCND3	1
7931	KCNE1	1
7932	KCNE1L	1
7933	KCNE2	1
7934	KCNE3	1
7935	KCNE4	1
7936	KCNF1	1
7937	KCNG1	1
7938	KCNG2	6.613208e-02
7939	KCNG3	1
7940	KCNG4	1
7941	KCNH1	1
7942	KCNH2	3.000035e-01
7943	KCNH3	1
7944	KCNH4	1
7945	KCNH5	1
7946	KCNH6	1
7947	KCNH7	1.348098e-01
7948	KCNH8	1
7949	KCNIP1	1
7950	KCNIP2	1.435958e-01
7951	KCNIP3	3.701673e-02
7952	KCNIP4	1
7953	KCNJ1	1
7954	KCNJ10	1
7955	KCNJ11	1
7956	KCNJ12	1
7957	KCNJ13	1
7958	KCNJ14	3.560372e-02
7959	KCNJ15	1
7960	KCNJ16	1
7961	KCNJ2	1
Done

Running MutSig 2:
Scatter job 88: processing genes 7871 - 7961
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
KCNA5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.344587e-02	ci left: 2.134918e-01	ci right 2.298706e-01	k: 2216	n:10000
Cons ci ratio: 5.312859e-02	ci left: 3.430310e-01	ci right 3.618550e-01	k: 3524	n:10000
KS ci ratio: 1.134190e-01	ci left: 1.006167e-01	ci right 1.128135e-01	k: 1066	n:10000
KCNA5   10000 perm   2 sec   (6136 perm/sec)   p_kst 1.066000e-01   p_cons 3.524000e-01   p_joint 2.216000e-01

Joint ci ratio: 3.214607e-02	ci left: 4.195321e-01	ci right 4.332893e-01	k: 8528	n:20000
Cons ci ratio: 3.731784e-02	ci left: 3.488626e-01	ci right 3.621795e-01	k: 7110	n:20000
KS ci ratio: 8.197512e-02	ci left: 9.837857e-02	ci right 1.068374e-01	k: 2051	n:20000
KCNA5   20000 perm   6 sec   (3584 perm/sec)   p_kst 1.025500e-01   p_cons 3.555000e-01   p_joint 4.264000e-01

Outputting figure to mutsig2_images.part000000000088/KCNA5.2_1846_20000_0.10255_0.3555_0.4264.png
                gene_name: KCNA5
               theta_stop: 0.082 
                    nperm: 20000 
                     p_ks: 0.10 
        ci_ks_bounds_left: 0.098 
       ci_ks_bounds_right: 0.11 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.43 
     ci_joint_bounds_left: 0.42 
    ci_joint_bounds_right: 0.43 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000088
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 88 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1712>
Subject: Job 8704245: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1712>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000089> was used as the working directory.
Started at Thu Nov 15 19:33:43 2012
Results reported at Thu Nov 15 20:32:49 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000089.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000089.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 89  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000089.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   3608.69 sec.
    Max Memory :      6018 MB
    Max Swap   :      8501 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
89
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 89
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 89: processing genes 7962 - 8051
Calculating significance of each gene.
Using projection method.
7962	KCNJ3	1
7963	KCNJ4	1
7964	KCNJ5	1
7965	KCNJ6	1
7966	KCNJ8	1
7967	KCNJ9	1
In gene KCNK1 the following bins exceed PROBCAP:
    THCA-DJ-A13O-TP	categ 5	N = 1007    n = 1	mu =   6.69e-08
7968	KCNK1	3.250103e-02
7969	KCNK10	1
In gene KCNK12 the following bins exceed PROBCAP:
    THCA-EL-A3T9-TP	categ 6	N = 468     n = 1	mu =   1.01e-07
7970	KCNK12	2.234936e-02
7971	KCNK13	1
7972	KCNK15	1
7973	KCNK16	1
7974	KCNK17	1
7975	KCNK18	5.092661e-03
7976	KCNK2	1
7977	KCNK3	1
7978	KCNK4	1
7979	KCNK5	1
7980	KCNK6	1.659346e-02
7981	KCNK7	1
7982	KCNK9	1
7983	KCNMA1	5.380256e-02
7984	KCNMB1	1
7985	KCNMB2	1
7986	KCNMB3	1
7987	KCNMB4	1
7988	KCNN1	1
7989	KCNN2	8.213394e-03
7990	KCNN3	1.180356e-02
7991	KCNN4	1.478516e-01
7992	KCNQ1	1
7993	KCNQ2	1
7994	KCNQ3	2.228978e-01
7995	KCNQ4	1
7996	KCNQ5	3.571461e-01
7997	KCNRG	1
7998	KCNS1	1
7999	KCNS2	1.404029e-01
8000/18093 8000	KCNS3	1
8001	KCNT1	1
8002	KCNT2	2.633482e-01
8003	KCNU1	1.125065e-01
8004	KCNV1	1
8005	KCNV2	1
8006	KCTD1	1
8007	KCTD10	1
8008	KCTD11	1
8009	KCTD12	1
8010	KCTD13	1
8011	KCTD14	1
8012	KCTD15	1
8013	KCTD16	4.529124e-02
8014	KCTD17	1
8015	KCTD18	1
8016	KCTD19	1
8017	KCTD2	1
8018	KCTD20	1
8019	KCTD21	1
8020	KCTD3	1
8021	KCTD4	1
8022	KCTD5	1
8023	KCTD6	1
8024	KCTD7	1
8025	KCTD8	1
8026	KCTD9	1
8027	KDELC1	1
8028	KDELC2	1
8029	KDELR1	1
8030	KDELR2	1
8031	KDELR3	1
8032	KDM1A	1
8033	KDM1B	1
8034	KDM2A	1.109701e-01
8035	KDM2B	4.003897e-01
8036	KDM3A	3.586239e-01
In gene KDM3B the following bins exceed PROBCAP:
    THCA-EL-A3T9-TP	categ 6	N = 5202    n = 1	mu =   1.01e-07
8037	KDM3B	3.069540e-01
8038	KDM4A	1
8039	KDM4B	1
8040	KDM4C	2.252720e-01
8041	KDM4D	1
8042	KDM4DL	1
8043	KDM5A	3.662529e-01
8044	KDM5B	1
8045	KDM5C	1
8046	KDM6A	2.010722e-01
In gene KDM6B the following bins exceed PROBCAP:
    THCA-BJ-A28S-TP	categ 6	N = 4313    n = 1	mu =   2.86e-07
    THCA-EM-A2CP-TP	categ 6	N = 4313    n = 1	mu =   6.74e-08
8047	KDM6B	2.649691e-03
8048	KDR	2.821099e-01
8049	KDSR	9.668780e-02
8050	KEAP1	6.390278e-02
8051	KEL	1
Done

Running MutSig 2:
Scatter job 89: processing genes 7962 - 8051
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
KDM6B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.676772e-02	ci left: 1.620951e-01	ci right 1.768979e-01	k: 1694	n:10000
Cons ci ratio: 1.076832e-02	ci left: 9.247196e-01	ci right 9.348283e-01	k: 9299	n:10000
KS ci ratio: 1.440974e-01	ci left: 6.391519e-02	ci right 7.393770e-02	k: 688	n:10000
KDM6B   10000 perm   2 sec   (4073 perm/sec)   p_kst 6.880000e-02   p_cons 9.299000e-01   p_joint 1.694000e-01

Joint ci ratio: 5.717524e-02	ci left: 1.848307e-01	ci right 1.957595e-01	k: 3805	n:20000
Cons ci ratio: 7.462553e-03	ci left: 9.288835e-01	ci right 9.358902e-01	k: 18649	n:20000
KS ci ratio: 1.030640e-01	ci left: 6.396343e-02	ci right 7.096296e-02	k: 1348	n:20000
KDM6B   20000 perm   7 sec   (2701 perm/sec)   p_kst 6.740000e-02   p_cons 9.324500e-01   p_joint 1.902500e-01

Joint ci ratio: 5.307231e-02	ci left: 1.497677e-01	ci right 1.579661e-01	k: 4615	n:30000
Cons ci ratio: 6.057887e-03	ci left: 9.302819e-01	ci right 9.359672e-01	k: 27995	n:30000
KS ci ratio: 8.391874e-02	ci left: 6.494777e-02	ci right 7.066961e-02	k: 2033	n:30000
KDM6B   30000 perm   10 sec   (2993 perm/sec)   p_kst 6.776667e-02   p_cons 9.331667e-01   p_joint 1.538333e-01

Outputting figure to mutsig2_images.part000000000089/KDM6B.4_5125_30000_0.067767_0.93317_0.15383.png
                gene_name: KDM6B
               theta_stop: 0.084 
                    nperm: 30000 
                     p_ks: 0.068 
        ci_ks_bounds_left: 0.065 
       ci_ks_bounds_right: 0.071 
                   p_cons: 0.93 
      ci_cons_bounds_left: 0.93 
     ci_cons_bounds_right: 0.94 
                  p_joint: 0.15 
     ci_joint_bounds_left: 0.15 
    ci_joint_bounds_right: 0.16 

Current progress: 17 percent done.
KCNK18
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.032079e-02	ci left: 7.800585e-01	ci right 7.961733e-01	k: 7882	n:10000
Cons ci ratio: 5.192847e-02	ci left: 3.534668e-01	ci right 3.724131e-01	k: 3629	n:10000
KS ci ratio: 2.066107e-02	ci left: 7.743839e-01	ci right 7.906512e-01	k: 7826	n:10000
KCNK18   10000 perm   2 sec   (6265 perm/sec)   p_kst 7.826000e-01   p_cons 3.629000e-01   p_joint 7.882000e-01

Outputting figure to mutsig2_images.part000000000089/KCNK18.2_1166_10000_0.7826_0.3629_0.7882.png
                gene_name: KCNK18
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.79 
     ci_joint_bounds_left: 0.78 
    ci_joint_bounds_right: 0.80 

Current progress: 33 percent done.
KCNMA1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.521745e-02	ci left: 5.434917e-01	ci right 5.630773e-01	k: 5533	n:10000
KS ci ratio: 7.025640e-02	ci left: 2.289892e-01	ci right 2.457640e-01	k: 2373	n:10000
KCNMA1   10000 perm   2 sec   (5361 perm/sec)   p_kst 2.373000e-01   p_cons 5.533000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000089/KCNMA1.2_3995_10000_0.2373_0.5533_1.png
                gene_name: KCNMA1
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
KCNN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
Cons ci ratio: 2.185407e-03	ci left: 9.957201e-01	ci right 9.979750e-01	k: 9970	n:10000
KS ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
KCNN2   10000 perm   2 sec   (6478 perm/sec)   p_kst 5.000000e-04   p_cons 9.970000e-01   p_joint 5.000000e-04

Joint ci ratio: 9.235139e-01	ci left: 4.952318e-04	ci right 1.360585e-03	k: 17	n:20000
Cons ci ratio: 1.415040e-03	ci left: 9.966486e-01	ci right 9.981008e-01	k: 19949	n:20000
KS ci ratio: 1.047271e+00	ci left: 3.461416e-04	ci right 1.111263e-03	k: 13	n:20000
KCNN2   20000 perm   3 sec   (5764 perm/sec)   p_kst 6.500000e-04   p_cons 9.974500e-01   p_joint 8.500000e-04

Joint ci ratio: 6.117725e-01	ci left: 9.527184e-04	ci right 1.815184e-03	k: 40	n:30000
Cons ci ratio: 1.140476e-03	ci left: 9.968672e-01	ci right 9.980331e-01	k: 29925	n:30000
KS ci ratio: 9.236603e-01	ci left: 3.301378e-04	ci right 9.071337e-04	k: 17	n:30000
KCNN2   30000 perm   5 sec   (5479 perm/sec)   p_kst 5.666667e-04   p_cons 9.975000e-01   p_joint 1.333333e-03

Joint ci ratio: 6.623027e-01	ci left: 5.887193e-04	ci right 1.187589e-03	k: 34	n:40000
Cons ci ratio: 9.358671e-04	ci left: 9.972351e-01	ci right 9.981904e-01	k: 39910	n:40000
KS ci ratio: 7.999166e-01	ci left: 3.645345e-04	ci right 8.626582e-04	k: 23	n:40000
KCNN2   40000 perm   8 sec   (5296 perm/sec)   p_kst 5.750000e-04   p_cons 9.977500e-01   p_joint 8.500000e-04

Joint ci ratio: 7.541931e-01	ci left: 3.397085e-04	ci right 7.618283e-04	k: 26	n:50000
Cons ci ratio: 8.193727e-04	ci left: 9.973927e-01	ci right 9.982278e-01	k: 49892	n:50000
KS ci ratio: 7.541931e-01	ci left: 3.397085e-04	ci right 7.618283e-04	k: 26	n:50000
KCNN2   50000 perm   10 sec   (5154 perm/sec)   p_kst 5.200000e-04   p_cons 9.978400e-01   p_joint 5.200000e-04

Joint ci ratio: 6.821911e-01	ci left: 3.648273e-04	ci right 7.528249e-04	k: 32	n:60000
Cons ci ratio: 7.739056e-04	ci left: 9.972652e-01	ci right 9.980521e-01	k: 59861	n:60000
KS ci ratio: 6.821911e-01	ci left: 3.648273e-04	ci right 7.528249e-04	k: 32	n:60000
KCNN2   60000 perm   12 sec   (5032 perm/sec)   p_kst 5.333333e-04   p_cons 9.976833e-01   p_joint 5.333333e-04

Joint ci ratio: 6.275230e-01	ci left: 3.841858e-04	ci right 7.450385e-04	k: 38	n:70000
Cons ci ratio: 7.223407e-04	ci left: 9.972550e-01	ci right 9.979885e-01	k: 69835	n:70000
KS ci ratio: 6.275230e-01	ci left: 3.841858e-04	ci right 7.450385e-04	k: 38	n:70000
KCNN2   70000 perm   14 sec   (4924 perm/sec)   p_kst 5.428571e-04   p_cons 9.976429e-01   p_joint 5.428571e-04

Joint ci ratio: 5.976300e-01	ci left: 3.783992e-04	ci right 7.095820e-04	k: 42	n:80000
Cons ci ratio: 6.654132e-04	ci left: 9.973565e-01	ci right 9.980316e-01	k: 79817	n:80000
KS ci ratio: 5.976300e-01	ci left: 3.783992e-04	ci right 7.095820e-04	k: 42	n:80000
KCNN2   80000 perm   17 sec   (4825 perm/sec)   p_kst 5.250000e-04   p_cons 9.977125e-01   p_joint 5.250000e-04

Joint ci ratio: 5.598444e-01	ci left: 3.932633e-04	ci right 7.070612e-04	k: 48	n:90000
Cons ci ratio: 6.197194e-04	ci left: 9.974361e-01	ci right 9.980645e-01	k: 89799	n:90000
KS ci ratio: 5.598444e-01	ci left: 3.932633e-04	ci right 7.070612e-04	k: 48	n:90000
KCNN2   90000 perm   19 sec   (4729 perm/sec)   p_kst 5.333333e-04   p_cons 9.977667e-01   p_joint 5.333333e-04

Joint ci ratio: 5.434621e-01	ci left: 3.797513e-04	ci right 6.705020e-04	k: 51	n:100000
Cons ci ratio: 5.977555e-04	ci left: 9.973725e-01	ci right 9.979780e-01	k: 99769	n:100000
KS ci ratio: 5.434621e-01	ci left: 3.797513e-04	ci right 6.705020e-04	k: 51	n:100000
KCNN2   100000 perm   22 sec   (4635 perm/sec)   p_kst 5.100000e-04   p_cons 9.976900e-01   p_joint 5.100000e-04

Joint ci ratio: 5.102013e-01	ci left: 4.004039e-04	ci right 6.815697e-04	k: 58	n:110000
Cons ci ratio: 5.629571e-04	ci left: 9.974471e-01	ci right 9.980171e-01	k: 109752	n:110000
KS ci ratio: 5.102013e-01	ci left: 4.004039e-04	ci right 6.815697e-04	k: 58	n:110000
KCNN2   110000 perm   24 sec   (4552 perm/sec)   p_kst 5.272727e-04   p_cons 9.977455e-01   p_joint 5.272727e-04

Joint ci ratio: 4.937419e-01	ci left: 3.961476e-04	ci right 6.622951e-04	k: 62	n:120000
Cons ci ratio: 5.501761e-04	ci left: 9.973595e-01	ci right 9.979160e-01	k: 119718	n:120000
KS ci ratio: 4.937419e-01	ci left: 3.961476e-04	ci right 6.622951e-04	k: 62	n:120000
KCNN2   120000 perm   27 sec   (4442 perm/sec)   p_kst 5.166667e-04   p_cons 9.976500e-01   p_joint 5.166667e-04

Joint ci ratio: 4.684017e-01	ci left: 4.129929e-04	ci right 6.716751e-04	k: 69	n:130000
Cons ci ratio: 5.246176e-04	ci left: 9.974081e-01	ci right 9.979386e-01	k: 129699	n:130000
KS ci ratio: 4.684017e-01	ci left: 4.129929e-04	ci right 6.716751e-04	k: 69	n:130000
KCNN2   130000 perm   30 sec   (4370 perm/sec)   p_kst 5.307692e-04   p_cons 9.976846e-01   p_joint 5.307692e-04

Joint ci ratio: 4.437274e-01	ci left: 4.340750e-04	ci right 6.873584e-04	k: 77	n:140000
Cons ci ratio: 5.022284e-04	ci left: 9.974500e-01	ci right 9.979576e-01	k: 139680	n:140000
KS ci ratio: 4.437274e-01	ci left: 4.340750e-04	ci right 6.873584e-04	k: 77	n:140000
KCNN2   140000 perm   33 sec   (4299 perm/sec)   p_kst 5.500000e-04   p_cons 9.977143e-01   p_joint 5.500000e-04

Joint ci ratio: 4.275859e-01	ci left: 4.407503e-04	ci right 6.858944e-04	k: 83	n:150000
Cons ci ratio: 4.831244e-04	ci left: 9.974794e-01	ci right 9.979677e-01	k: 149660	n:150000
KS ci ratio: 4.275859e-01	ci left: 4.407503e-04	ci right 6.858944e-04	k: 83	n:150000
KCNN2   150000 perm   35 sec   (4230 perm/sec)   p_kst 5.533333e-04   p_cons 9.977333e-01   p_joint 5.533333e-04

Joint ci ratio: 4.085695e-01	ci left: 4.579460e-04	ci right 6.982537e-04	k: 91	n:160000
Cons ci ratio: 4.718054e-04	ci left: 9.974463e-01	ci right 9.979229e-01	k: 159631	n:160000
KS ci ratio: 4.085695e-01	ci left: 4.579460e-04	ci right 6.982537e-04	k: 91	n:160000
KCNN2   160000 perm   38 sec   (4169 perm/sec)   p_kst 5.687500e-04   p_cons 9.976938e-01   p_joint 5.687500e-04

Joint ci ratio: 3.979010e-01	ci left: 4.574368e-04	ci right 6.895595e-04	k: 96	n:170000
Cons ci ratio: 4.582292e-04	ci left: 9.974483e-01	ci right 9.979109e-01	k: 169607	n:170000
KS ci ratio: 3.979010e-01	ci left: 4.574368e-04	ci right 6.895595e-04	k: 96	n:170000
KCNN2   170000 perm   41 sec   (4109 perm/sec)   p_kst 5.647059e-04   p_cons 9.976882e-01   p_joint 5.647059e-04

Joint ci ratio: 3.806309e-01	ci left: 4.771329e-04	ci right 7.061172e-04	k: 105	n:180000
Cons ci ratio: 4.468270e-04	ci left: 9.974386e-01	ci right 9.978896e-01	k: 179581	n:180000
KS ci ratio: 3.806309e-01	ci left: 4.771329e-04	ci right 7.061172e-04	k: 105	n:180000
KCNN2   180000 perm   44 sec   (4051 perm/sec)   p_kst 5.833333e-04   p_cons 9.976722e-01   p_joint 5.833333e-04

Joint ci ratio: 3.736481e-01	ci left: 4.710774e-04	ci right 6.919929e-04	k: 109	n:190000
Cons ci ratio: 4.720189e-04	ci left: 9.970124e-01	ci right 9.974880e-01	k: 189479	n:190000
KS ci ratio: 3.736481e-01	ci left: 4.710774e-04	ci right 6.919929e-04	k: 109	n:190000
KCNN2   190000 perm   48 sec   (3994 perm/sec)   p_kst 5.736842e-04   p_cons 9.972579e-01   p_joint 5.736842e-04

Joint ci ratio: 3.607579e-01	ci left: 4.838342e-04	ci right 7.010664e-04	k: 117	n:200000
Cons ci ratio: 4.556496e-04	ci left: 9.970731e-01	ci right 9.975323e-01	k: 199462	n:200000
KS ci ratio: 3.607579e-01	ci left: 4.838342e-04	ci right 7.010664e-04	k: 117	n:200000
KCNN2   200000 perm   51 sec   (3936 perm/sec)   p_kst 5.850000e-04   p_cons 9.973100e-01   p_joint 5.850000e-04

Joint ci ratio: 3.505103e-01	ci left: 4.911508e-04	ci right 7.039806e-04	k: 124	n:210000
Cons ci ratio: 4.450822e-04	ci left: 9.970736e-01	ci right 9.975220e-01	k: 209434	n:210000
KS ci ratio: 3.505103e-01	ci left: 4.911508e-04	ci right 7.039806e-04	k: 124	n:210000
KCNN2   210000 perm   54 sec   (3877 perm/sec)   p_kst 5.904762e-04   p_cons 9.973048e-01   p_joint 5.904762e-04

Joint ci ratio: 3.437044e-01	ci left: 4.895718e-04	ci right 6.966824e-04	k: 129	n:220000
Cons ci ratio: 4.333787e-04	ci left: 9.970978e-01	ci right 9.975343e-01	k: 219411	n:220000
KS ci ratio: 3.437044e-01	ci left: 4.895718e-04	ci right 6.966824e-04	k: 129	n:220000
KCNN2   220000 perm   58 sec   (3822 perm/sec)   p_kst 5.863636e-04   p_cons 9.973227e-01   p_joint 5.863636e-04

Joint ci ratio: 3.385370e-01	ci left: 4.841875e-04	ci right 6.852678e-04	k: 133	n:230000
Cons ci ratio: 4.239156e-04	ci left: 9.971020e-01	ci right 9.975288e-01	k: 229384	n:230000
KS ci ratio: 3.385370e-01	ci left: 4.841875e-04	ci right 6.852678e-04	k: 133	n:230000
KCNN2   230000 perm   61 sec   (3769 perm/sec)   p_kst 5.782609e-04   p_cons 9.973217e-01   p_joint 5.782609e-04

Joint ci ratio: 3.360413e-01	ci left: 4.716400e-04	ci right 6.657524e-04	k: 135	n:240000
Cons ci ratio: 4.150464e-04	ci left: 9.971058e-01	ci right 9.975237e-01	k: 239357	n:240000
KS ci ratio: 3.360413e-01	ci left: 4.716400e-04	ci right 6.657524e-04	k: 135	n:240000
KCNN2   240000 perm   65 sec   (3720 perm/sec)   p_kst 5.625000e-04   p_cons 9.973208e-01   p_joint 5.625000e-04

Joint ci ratio: 3.288650e-01	ci left: 4.747716e-04	ci right 6.651181e-04	k: 141	n:250000
Cons ci ratio: 4.073189e-04	ci left: 9.971012e-01	ci right 9.975112e-01	k: 249328	n:250000
KS ci ratio: 3.288650e-01	ci left: 4.747716e-04	ci right 6.651181e-04	k: 141	n:250000
KCNN2   250000 perm   68 sec   (3669 perm/sec)   p_kst 5.640000e-04   p_cons 9.973120e-01   p_joint 5.640000e-04

Joint ci ratio: 3.232241e-01	ci left: 4.741681e-04	ci right 6.603359e-04	k: 146	n:260000
Cons ci ratio: 4.019987e-04	ci left: 9.970690e-01	ci right 9.974736e-01	k: 259292	n:260000
KS ci ratio: 3.232241e-01	ci left: 4.741681e-04	ci right 6.603359e-04	k: 146	n:260000
KCNN2   260000 perm   72 sec   (3620 perm/sec)   p_kst 5.615385e-04   p_cons 9.972769e-01   p_joint 5.615385e-04

Joint ci ratio: 3.189153e-01	ci left: 4.702272e-04	ci right 6.518840e-04	k: 150	n:270000
Cons ci ratio: 3.930662e-04	ci left: 9.970931e-01	ci right 9.974887e-01	k: 269270	n:270000
KS ci ratio: 3.189153e-01	ci left: 4.702272e-04	ci right 6.518840e-04	k: 150	n:270000
KCNN2   270000 perm   76 sec   (3571 perm/sec)   p_kst 5.555556e-04   p_cons 9.972963e-01   p_joint 5.555556e-04

Joint ci ratio: 3.168261e-01	ci left: 4.600060e-04	ci right 6.363140e-04	k: 152	n:280000
Cons ci ratio: 3.864748e-04	ci left: 9.970897e-01	ci right 9.974785e-01	k: 279241	n:280000
KS ci ratio: 3.168261e-01	ci left: 4.600060e-04	ci right 6.363140e-04	k: 152	n:280000
KCNN2   280000 perm   79 sec   (3523 perm/sec)   p_kst 5.428571e-04   p_cons 9.972893e-01   p_joint 5.428571e-04

Joint ci ratio: 3.117730e-01	ci left: 4.600253e-04	ci right 6.329690e-04	k: 157	n:290000
Cons ci ratio: 3.821300e-04	ci left: 9.970580e-01	ci right 9.974423e-01	k: 289204	n:290000
KS ci ratio: 3.117730e-01	ci left: 4.600253e-04	ci right 6.329690e-04	k: 157	n:290000
KCNN2   290000 perm   83 sec   (3476 perm/sec)   p_kst 5.413793e-04   p_cons 9.972552e-01   p_joint 5.413793e-04

Joint ci ratio: 3.069542e-01	ci left: 4.600641e-04	ci right 6.298265e-04	k: 162	n:300000
Cons ci ratio: 3.742232e-04	ci left: 9.970836e-01	ci right 9.974600e-01	k: 299183	n:300000
KS ci ratio: 3.069542e-01	ci left: 4.600641e-04	ci right 6.298265e-04	k: 162	n:300000
KCNN2   300000 perm   87 sec   (3430 perm/sec)   p_kst 5.400000e-04   p_cons 9.972767e-01   p_joint 5.400000e-04

Joint ci ratio: 3.032565e-01	ci left: 4.571388e-04	ci right 6.233976e-04	k: 166	n:310000
Cons ci ratio: 3.654497e-04	ci left: 9.971277e-01	ci right 9.974952e-01	k: 309168	n:310000
KS ci ratio: 3.032565e-01	ci left: 4.571388e-04	ci right 6.233976e-04	k: 166	n:310000
KCNN2   310000 perm   92 sec   (3385 perm/sec)   p_kst 5.354839e-04   p_cons 9.973161e-01   p_joint 5.354839e-04

Joint ci ratio: 3.014584e-01	ci left: 4.486288e-04	ci right 6.106397e-04	k: 168	n:320000
Cons ci ratio: 3.590918e-04	ci left: 9.971399e-01	ci right 9.975010e-01	k: 319144	n:320000
KS ci ratio: 3.014584e-01	ci left: 4.486288e-04	ci right 6.106397e-04	k: 168	n:320000
KCNN2   320000 perm   96 sec   (3343 perm/sec)   p_kst 5.250000e-04   p_cons 9.973250e-01   p_joint 5.250000e-04

Joint ci ratio: 2.979535e-01	ci left: 4.462438e-04	ci right 6.051655e-04	k: 172	n:330000
Cons ci ratio: 3.536531e-04	ci left: 9.971420e-01	ci right 9.974976e-01	k: 329117	n:330000
KS ci ratio: 2.979535e-01	ci left: 4.462438e-04	ci right 6.051655e-04	k: 172	n:330000
KCNN2   330000 perm   100 sec   (3301 perm/sec)   p_kst 5.212121e-04   p_cons 9.973242e-01   p_joint 5.212121e-04

Joint ci ratio: 2.904915e-01	ci left: 4.576368e-04	ci right 6.157843e-04	k: 181	n:340000
Cons ci ratio: 3.478785e-04	ci left: 9.971532e-01	ci right 9.975030e-01	k: 339093	n:340000
KS ci ratio: 2.904915e-01	ci left: 4.576368e-04	ci right 6.157843e-04	k: 181	n:340000
KCNN2   340000 perm   104 sec   (3262 perm/sec)   p_kst 5.323529e-04   p_cons 9.973324e-01   p_joint 5.323529e-04

Joint ci ratio: 2.873516e-01	ci left: 4.551618e-04	ci right 6.104451e-04	k: 185	n:350000
Cons ci ratio: 3.432945e-04	ci left: 9.971490e-01	ci right 9.974941e-01	k: 349064	n:350000
KS ci ratio: 2.873516e-01	ci left: 4.551618e-04	ci right 6.104451e-04	k: 185	n:350000
KCNN2   350000 perm   109 sec   (3221 perm/sec)   p_kst 5.285714e-04   p_cons 9.973257e-01   p_joint 5.285714e-04

Joint ci ratio: 2.828258e-01	ci left: 4.579937e-04	ci right 6.113432e-04	k: 191	n:360000
Cons ci ratio: 3.387093e-04	ci left: 9.971480e-01	ci right 9.974884e-01	k: 359036	n:360000
KS ci ratio: 2.828258e-01	ci left: 4.579937e-04	ci right 6.113432e-04	k: 191	n:360000
KCNN2   360000 perm   113 sec   (3183 perm/sec)   p_kst 5.305556e-04   p_cons 9.973222e-01   p_joint 5.305556e-04

Joint ci ratio: 2.785073e-01	ci left: 4.606906e-04	ci right 6.121749e-04	k: 197	n:370000
Cons ci ratio: 3.339647e-04	ci left: 9.971526e-01	ci right 9.974882e-01	k: 369010	n:370000
KS ci ratio: 2.785073e-01	ci left: 4.606906e-04	ci right 6.121749e-04	k: 197	n:370000
KCNN2   370000 perm   118 sec   (3134 perm/sec)   p_kst 5.324324e-04   p_cons 9.973243e-01   p_joint 5.324324e-04

Joint ci ratio: 2.750562e-01	ci left: 4.608120e-04	ci right 6.101338e-04	k: 202	n:380000
Cons ci ratio: 3.308723e-04	ci left: 9.971326e-01	ci right 9.974651e-01	k: 378975	n:380000
KS ci ratio: 2.750562e-01	ci left: 4.608120e-04	ci right 6.101338e-04	k: 202	n:380000
KCNN2   380000 perm   123 sec   (3094 perm/sec)   p_kst 5.315789e-04   p_cons 9.973026e-01   p_joint 5.315789e-04

Joint ci ratio: 2.697906e-01	ci left: 4.681085e-04	ci right 6.163994e-04	k: 210	n:390000
Cons ci ratio: 3.255125e-04	ci left: 9.971532e-01	ci right 9.974803e-01	k: 388955	n:390000
KS ci ratio: 2.697906e-01	ci left: 4.681085e-04	ci right 6.163994e-04	k: 210	n:390000
KCNN2   390000 perm   128 sec   (3058 perm/sec)   p_kst 5.384615e-04   p_cons 9.973205e-01   p_joint 5.384615e-04

Joint ci ratio: 2.642133e-01	ci left: 4.774002e-04	ci right 6.249913e-04	k: 219	n:400000
Cons ci ratio: 3.221950e-04	ci left: 9.971420e-01	ci right 9.974657e-01	k: 398923	n:400000
KS ci ratio: 2.642133e-01	ci left: 4.774002e-04	ci right 6.249913e-04	k: 219	n:400000
KCNN2   400000 perm   132 sec   (3023 perm/sec)   p_kst 5.475000e-04   p_cons 9.973075e-01   p_joint 5.475000e-04

Joint ci ratio: 2.630216e-01	ci left: 4.703118e-04	ci right 6.149477e-04	k: 221	n:410000
Cons ci ratio: 3.178153e-04	ci left: 9.971514e-01	ci right 9.974707e-01	k: 408899	n:410000
KS ci ratio: 2.630216e-01	ci left: 4.703118e-04	ci right 6.149477e-04	k: 221	n:410000
KCNN2   410000 perm   137 sec   (2990 perm/sec)   p_kst 5.390244e-04   p_cons 9.973146e-01   p_joint 5.390244e-04

Joint ci ratio: 2.601089e-01	ci left: 4.702382e-04	ci right 6.129896e-04	k: 226	n:420000
Cons ci ratio: 3.133280e-04	ci left: 9.971653e-01	ci right 9.974801e-01	k: 418877	n:420000
KS ci ratio: 2.601089e-01	ci left: 4.702382e-04	ci right 6.129896e-04	k: 226	n:420000
KCNN2   420000 perm   142 sec   (2961 perm/sec)   p_kst 5.380952e-04   p_cons 9.973262e-01   p_joint 5.380952e-04

Joint ci ratio: 2.561884e-01	ci left: 4.745284e-04	ci right 6.160639e-04	k: 233	n:430000
Cons ci ratio: 3.098303e-04	ci left: 9.971643e-01	ci right 9.974755e-01	k: 428849	n:430000
KS ci ratio: 2.561884e-01	ci left: 4.745284e-04	ci right 6.160639e-04	k: 233	n:430000
KCNN2   430000 perm   147 sec   (2930 perm/sec)   p_kst 5.418605e-04   p_cons 9.973233e-01   p_joint 5.418605e-04

Joint ci ratio: 2.534946e-01	ci left: 4.743815e-04	ci right 6.141504e-04	k: 238	n:440000
Cons ci ratio: 3.077460e-04	ci left: 9.971399e-01	ci right 9.974490e-01	k: 438811	n:440000
KS ci ratio: 2.534946e-01	ci left: 4.743815e-04	ci right 6.141504e-04	k: 238	n:440000
KCNN2   440000 perm   152 sec   (2897 perm/sec)   p_kst 5.409091e-04   p_cons 9.972977e-01   p_joint 5.409091e-04

Joint ci ratio: 2.508840e-01	ci left: 4.742486e-04	ci right 6.123145e-04	k: 243	n:450000
Cons ci ratio: 3.041764e-04	ci left: 9.971440e-01	ci right 9.974495e-01	k: 448785	n:450000
KS ci ratio: 2.508840e-01	ci left: 4.742486e-04	ci right 6.123145e-04	k: 243	n:450000
KCNN2   450000 perm   157 sec   (2862 perm/sec)   p_kst 5.400000e-04   p_cons 9.973000e-01   p_joint 5.400000e-04

Joint ci ratio: 2.463802e-01	ci left: 4.822854e-04	ci right 6.197847e-04	k: 252	n:460000
Cons ci ratio: 3.009706e-04	ci left: 9.971435e-01	ci right 9.974458e-01	k: 458757	n:460000
KS ci ratio: 2.463802e-01	ci left: 4.822854e-04	ci right 6.197847e-04	k: 252	n:460000
KCNN2   460000 perm   162 sec   (2831 perm/sec)   p_kst 5.478261e-04   p_cons 9.972978e-01   p_joint 5.478261e-04

Joint ci ratio: 2.430406e-01	ci left: 4.860045e-04	ci right 6.224027e-04	k: 259	n:470000
Cons ci ratio: 2.980987e-04	ci left: 9.971387e-01	ci right 9.974381e-01	k: 468727	n:470000
KS ci ratio: 2.430406e-01	ci left: 4.860045e-04	ci right 6.224027e-04	k: 259	n:470000
KCNN2   470000 perm   168 sec   (2797 perm/sec)   p_kst 5.510638e-04   p_cons 9.972915e-01   p_joint 5.510638e-04

Joint ci ratio: 2.416511e-01	ci left: 4.817498e-04	ci right 6.160650e-04	k: 262	n:480000
Cons ci ratio: 2.957597e-04	ci left: 9.971256e-01	ci right 9.974225e-01	k: 478693	n:480000
KS ci ratio: 2.416511e-01	ci left: 4.817498e-04	ci right 6.160650e-04	k: 262	n:480000
KCNN2   480000 perm   173 sec   (2768 perm/sec)   p_kst 5.458333e-04   p_cons 9.972771e-01   p_joint 5.458333e-04

Joint ci ratio: 2.393864e-01	ci left: 4.815073e-04	ci right 6.143101e-04	k: 267	n:490000
Cons ci ratio: 2.918180e-04	ci left: 9.971444e-01	ci right 9.974374e-01	k: 488674	n:490000
KS ci ratio: 2.393864e-01	ci left: 4.815073e-04	ci right 6.143101e-04	k: 267	n:490000
KCNN2   490000 perm   179 sec   (2739 perm/sec)   p_kst 5.448980e-04   p_cons 9.972939e-01   p_joint 5.448980e-04

Joint ci ratio: 2.358909e-01	ci left: 4.869248e-04	ci right 6.189745e-04	k: 275	n:500000
Cons ci ratio: 2.884482e-04	ci left: 9.971543e-01	ci right 9.974439e-01	k: 498651	n:500000
KS ci ratio: 2.358909e-01	ci left: 4.869248e-04	ci right 6.189745e-04	k: 275	n:500000
KCNN2   500000 perm   184 sec   (2710 perm/sec)   p_kst 5.500000e-04   p_cons 9.973020e-01   p_joint 5.500000e-04

Joint ci ratio: 2.337829e-01	ci left: 4.866043e-04	ci right 6.172175e-04	k: 280	n:510000
Cons ci ratio: 2.857103e-04	ci left: 9.971537e-01	ci right 9.974406e-01	k: 508623	n:510000
KS ci ratio: 2.337829e-01	ci left: 4.866043e-04	ci right 6.172175e-04	k: 280	n:510000
KCNN2   510000 perm   190 sec   (2682 perm/sec)   p_kst 5.490196e-04   p_cons 9.973000e-01   p_joint 5.490196e-04

Joint ci ratio: 2.293360e-01	ci left: 4.971737e-04	ci right 6.277262e-04	k: 291	n:520000
Cons ci ratio: 2.830487e-04	ci left: 9.971532e-01	ci right 9.974374e-01	k: 518595	n:520000
KS ci ratio: 2.293360e-01	ci left: 4.971737e-04	ci right 6.277262e-04	k: 291	n:520000
KCNN2   520000 perm   196 sec   (2656 perm/sec)   p_kst 5.596154e-04   p_cons 9.972981e-01   p_joint 5.596154e-04

Joint ci ratio: 2.266353e-01	ci left: 5.002465e-04	ci right 6.298427e-04	k: 298	n:530000
Cons ci ratio: 2.799694e-04	ci left: 9.971624e-01	ci right 9.974434e-01	k: 528572	n:530000
KS ci ratio: 2.266353e-01	ci left: 5.002465e-04	ci right 6.298427e-04	k: 298	n:530000
KCNN2   530000 perm   201 sec   (2633 perm/sec)   p_kst 5.622642e-04   p_cons 9.973057e-01   p_joint 5.622642e-04

Joint ci ratio: 2.255074e-01	ci left: 4.962235e-04	ci right 6.240488e-04	k: 301	n:540000
Cons ci ratio: 2.772731e-04	ci left: 9.971656e-01	ci right 9.974439e-01	k: 538546	n:540000
KS ci ratio: 2.255074e-01	ci left: 4.962235e-04	ci right 6.240488e-04	k: 301	n:540000
KCNN2   540000 perm   207 sec   (2610 perm/sec)   p_kst 5.574074e-04   p_cons 9.973074e-01   p_joint 5.574074e-04

Joint ci ratio: 2.225781e-01	ci left: 5.009306e-04	ci right 6.280626e-04	k: 309	n:550000
Cons ci ratio: 2.748389e-04	ci left: 9.971649e-01	ci right 9.974407e-01	k: 548518	n:550000
KS ci ratio: 2.225781e-01	ci left: 5.009306e-04	ci right 6.280626e-04	k: 309	n:550000
KCNN2   550000 perm   213 sec   (2586 perm/sec)   p_kst 5.618182e-04   p_cons 9.973055e-01   p_joint 5.618182e-04

Joint ci ratio: 2.215094e-01	ci left: 4.970445e-04	ci right 6.225020e-04	k: 312	n:560000
Cons ci ratio: 2.726485e-04	ci left: 9.971606e-01	ci right 9.974342e-01	k: 558488	n:560000
KS ci ratio: 2.215094e-01	ci left: 4.970445e-04	ci right 6.225020e-04	k: 312	n:560000
KCNN2   560000 perm   218 sec   (2563 perm/sec)   p_kst 5.571429e-04   p_cons 9.973000e-01   p_joint 5.571429e-04

Joint ci ratio: 2.187313e-01	ci left: 5.015859e-04	ci right 6.263884e-04	k: 320	n:570000
Cons ci ratio: 2.698044e-04	ci left: 9.971708e-01	ci right 9.974416e-01	k: 568466	n:570000
KS ci ratio: 2.187313e-01	ci left: 5.015859e-04	ci right 6.263884e-04	k: 320	n:570000
KCNN2   570000 perm   225 sec   (2539 perm/sec)   p_kst 5.614035e-04   p_cons 9.973088e-01   p_joint 5.614035e-04

Joint ci ratio: 2.160551e-01	ci left: 5.059801e-04	ci right 6.301314e-04	k: 328	n:580000
Cons ci ratio: 2.680747e-04	ci left: 9.971595e-01	ci right 9.974286e-01	k: 578432	n:580000
KS ci ratio: 2.160551e-01	ci left: 5.059801e-04	ci right 6.301314e-04	k: 328	n:580000
KCNN2   580000 perm   231 sec   (2515 perm/sec)   p_kst 5.655172e-04   p_cons 9.972966e-01   p_joint 5.655172e-04

Joint ci ratio: 2.154021e-01	ci left: 5.006107e-04	ci right 6.230241e-04	k: 330	n:590000
Cons ci ratio: 2.657054e-04	ci left: 9.971625e-01	ci right 9.974292e-01	k: 588406	n:590000
KS ci ratio: 2.154021e-01	ci left: 5.006107e-04	ci right 6.230241e-04	k: 330	n:590000
KCNN2   590000 perm   237 sec   (2488 perm/sec)   p_kst 5.593220e-04   p_cons 9.972983e-01   p_joint 5.593220e-04

Joint ci ratio: 2.131596e-01	ci left: 5.033079e-04	ci right 6.249321e-04	k: 337	n:600000
Cons ci ratio: 2.636420e-04	ci left: 9.971603e-01	ci right 9.974248e-01	k: 598377	n:600000
KS ci ratio: 2.131596e-01	ci left: 5.033079e-04	ci right 6.249321e-04	k: 337	n:600000
KCNN2   600000 perm   244 sec   (2464 perm/sec)   p_kst 5.616667e-04   p_cons 9.972950e-01   p_joint 5.616667e-04

Joint ci ratio: 2.125324e-01	ci left: 4.981607e-04	ci right 6.181407e-04	k: 339	n:610000
Cons ci ratio: 2.606716e-04	ci left: 9.971783e-01	ci right 9.974399e-01	k: 608360	n:610000
KS ci ratio: 2.125324e-01	ci left: 4.981607e-04	ci right 6.181407e-04	k: 339	n:610000
KCNN2   610000 perm   250 sec   (2441 perm/sec)   p_kst 5.557377e-04   p_cons 9.973115e-01   p_joint 5.557377e-04

Joint ci ratio: 2.116014e-01	ci left: 4.947075e-04	ci right 6.132661e-04	k: 342	n:620000
Cons ci ratio: 2.587239e-04	ci left: 9.971759e-01	ci right 9.974355e-01	k: 618331	n:620000
KS ci ratio: 2.116014e-01	ci left: 4.947075e-04	ci right 6.132661e-04	k: 342	n:620000
KCNN2   620000 perm   256 sec   (2419 perm/sec)   p_kst 5.516129e-04   p_cons 9.973081e-01   p_joint 5.516129e-04

Joint ci ratio: 2.109877e-01	ci left: 4.898615e-04	ci right 6.068743e-04	k: 344	n:630000
Cons ci ratio: 2.561359e-04	ci left: 9.971883e-01	ci right 9.974452e-01	k: 628311	n:630000
KS ci ratio: 2.109877e-01	ci left: 4.898615e-04	ci right 6.068743e-04	k: 344	n:630000
KCNN2   630000 perm   263 sec   (2398 perm/sec)   p_kst 5.460317e-04   p_cons 9.973190e-01   p_joint 5.460317e-04

Joint ci ratio: 2.097754e-01	ci left: 4.881281e-04	ci right 6.039707e-04	k: 348	n:640000
Cons ci ratio: 2.537686e-04	ci left: 9.971970e-01	ci right 9.974516e-01	k: 638289	n:640000
KS ci ratio: 2.097754e-01	ci left: 4.881281e-04	ci right 6.039707e-04	k: 348	n:640000
KCNN2   640000 perm   269 sec   (2378 perm/sec)   p_kst 5.437500e-04   p_cons 9.973266e-01   p_joint 5.437500e-04

Joint ci ratio: 2.088800e-01	ci left: 4.849918e-04	ci right 5.995360e-04	k: 351	n:650000
Cons ci ratio: 2.514639e-04	ci left: 9.972055e-01	ci right 9.974578e-01	k: 648267	n:650000
KS ci ratio: 2.088800e-01	ci left: 4.849918e-04	ci right 5.995360e-04	k: 351	n:650000
KCNN2   650000 perm   276 sec   (2359 perm/sec)   p_kst 5.400000e-04   p_cons 9.973338e-01   p_joint 5.400000e-04

Joint ci ratio: 2.077034e-01	ci left: 4.833879e-04	ci right 5.968284e-04	k: 355	n:660000
Cons ci ratio: 2.494324e-04	ci left: 9.972090e-01	ci right 9.974593e-01	k: 658242	n:660000
KS ci ratio: 2.077034e-01	ci left: 4.833879e-04	ci right 5.968284e-04	k: 355	n:660000
KCNN2   660000 perm   282 sec   (2340 perm/sec)   p_kst 5.378788e-04   p_cons 9.973364e-01   p_joint 5.378788e-04

Joint ci ratio: 2.062600e-01	ci left: 4.832490e-04	ci right 5.957695e-04	k: 360	n:670000
Cons ci ratio: 2.477272e-04	ci left: 9.972064e-01	ci right 9.974549e-01	k: 668213	n:670000
KS ci ratio: 2.062600e-01	ci left: 4.832490e-04	ci right 5.957695e-04	k: 360	n:670000
KCNN2   670000 perm   289 sec   (2321 perm/sec)   p_kst 5.373134e-04   p_cons 9.973328e-01   p_joint 5.373134e-04

Joint ci ratio: 2.054087e-01	ci left: 4.803267e-04	ci right 5.916471e-04	k: 363	n:680000
Cons ci ratio: 2.455123e-04	ci left: 9.972159e-01	ci right 9.974622e-01	k: 678192	n:680000
KS ci ratio: 2.054087e-01	ci left: 4.803267e-04	ci right 5.916471e-04	k: 363	n:680000
KCNN2   680000 perm   295 sec   (2302 perm/sec)   p_kst 5.338235e-04   p_cons 9.973412e-01   p_joint 5.338235e-04

Joint ci ratio: 2.040123e-01	ci left: 4.802404e-04	ci right 5.906899e-04	k: 368	n:690000
Cons ci ratio: 2.440858e-04	ci left: 9.972088e-01	ci right 9.974536e-01	k: 688160	n:690000
KS ci ratio: 2.040123e-01	ci left: 4.802404e-04	ci right 5.906899e-04	k: 368	n:690000
KCNN2   690000 perm   302 sec   (2283 perm/sec)   p_kst 5.333333e-04   p_cons 9.973333e-01   p_joint 5.333333e-04

Joint ci ratio: 2.029157e-01	ci left: 4.788029e-04	ci right 5.882565e-04	k: 372	n:700000
Cons ci ratio: 2.425518e-04	ci left: 9.972049e-01	ci right 9.974481e-01	k: 698130	n:700000
KS ci ratio: 2.029157e-01	ci left: 4.788029e-04	ci right 5.882565e-04	k: 372	n:700000
KCNN2   700000 perm   309 sec   (2264 perm/sec)   p_kst 5.314286e-04   p_cons 9.973286e-01   p_joint 5.314286e-04

Joint ci ratio: 2.015692e-01	ci left: 4.787449e-04	ci right 5.873696e-04	k: 377	n:710000
Cons ci ratio: 2.408549e-04	ci left: 9.972053e-01	ci right 9.974469e-01	k: 708103	n:710000
KS ci ratio: 2.015692e-01	ci left: 4.787449e-04	ci right 5.873696e-04	k: 377	n:710000
KCNN2   710000 perm   316 sec   (2245 perm/sec)   p_kst 5.309859e-04   p_cons 9.973282e-01   p_joint 5.309859e-04

Joint ci ratio: 1.994691e-01	ci left: 4.826490e-04	ci right 5.908798e-04	k: 385	n:720000
Cons ci ratio: 2.395666e-04	ci left: 9.971973e-01	ci right 9.974376e-01	k: 718070	n:720000
KS ci ratio: 1.994691e-01	ci left: 4.826490e-04	ci right 5.908798e-04	k: 385	n:720000
KCNN2   720000 perm   323 sec   (2227 perm/sec)   p_kst 5.347222e-04   p_cons 9.973194e-01   p_joint 5.347222e-04

Joint ci ratio: 1.986988e-01	ci left: 4.799420e-04	ci right 5.870998e-04	k: 388	n:730000
Cons ci ratio: 2.377483e-04	ci left: 9.972021e-01	ci right 9.974405e-01	k: 728046	n:730000
KS ci ratio: 1.986988e-01	ci left: 4.799420e-04	ci right 5.870998e-04	k: 388	n:730000
KCNN2   730000 perm   331 sec   (2209 perm/sec)   p_kst 5.315068e-04   p_cons 9.973233e-01   p_joint 5.315068e-04

Joint ci ratio: 1.961924e-01	ci left: 4.863020e-04	ci right 5.933465e-04	k: 398	n:740000
Cons ci ratio: 2.358507e-04	ci left: 9.972095e-01	ci right 9.974460e-01	k: 738024	n:740000
KS ci ratio: 1.961924e-01	ci left: 4.863020e-04	ci right 5.933465e-04	k: 398	n:740000
KCNN2   740000 perm   338 sec   (2191 perm/sec)   p_kst 5.378378e-04   p_cons 9.973297e-01   p_joint 5.378378e-04

Joint ci ratio: 1.947336e-01	ci left: 4.874265e-04	ci right 5.938262e-04	k: 404	n:750000
Cons ci ratio: 2.342897e-04	ci left: 9.972099e-01	ci right 9.974449e-01	k: 747997	n:750000
KS ci ratio: 1.947336e-01	ci left: 4.874265e-04	ci right 5.938262e-04	k: 404	n:750000
KCNN2   750000 perm   345 sec   (2173 perm/sec)   p_kst 5.386667e-04   p_cons 9.973293e-01   p_joint 5.386667e-04

Joint ci ratio: 1.928380e-01	ci left: 4.910287e-04	ci right 5.970490e-04	k: 412	n:760000
Cons ci ratio: 2.331612e-04	ci left: 9.972009e-01	ci right 9.974347e-01	k: 757963	n:760000
KS ci ratio: 1.928380e-01	ci left: 4.910287e-04	ci right 5.970490e-04	k: 412	n:760000
KCNN2   760000 perm   352 sec   (2157 perm/sec)   p_kst 5.421053e-04   p_cons 9.973197e-01   p_joint 5.421053e-04

Joint ci ratio: 1.900953e-01	ci left: 4.994894e-04	ci right 6.056254e-04	k: 424	n:770000
Cons ci ratio: 2.309203e-04	ci left: 9.972187e-01	ci right 9.974503e-01	k: 767949	n:770000
KS ci ratio: 1.900953e-01	ci left: 4.994894e-04	ci right 6.056254e-04	k: 424	n:770000
KCNN2   770000 perm   360 sec   (2140 perm/sec)   p_kst 5.506494e-04   p_cons 9.973364e-01   p_joint 5.506494e-04

Joint ci ratio: 1.889870e-01	ci left: 4.991917e-04	ci right 6.045750e-04	k: 429	n:780000
Cons ci ratio: 2.297864e-04	ci left: 9.972111e-01	ci right 9.974416e-01	k: 777916	n:780000
KS ci ratio: 1.889870e-01	ci left: 4.991917e-04	ci right 6.045750e-04	k: 429	n:780000
KCNN2   780000 perm   367 sec   (2124 perm/sec)   p_kst 5.500000e-04   p_cons 9.973282e-01   p_joint 5.500000e-04

Joint ci ratio: 1.883314e-01	ci left: 4.964909e-04	ci right 6.008989e-04	k: 432	n:790000
Cons ci ratio: 2.283420e-04	ci left: 9.972115e-01	ci right 9.974405e-01	k: 787889	n:790000
KS ci ratio: 1.883314e-01	ci left: 4.964909e-04	ci right 6.008989e-04	k: 432	n:790000
KCNN2   790000 perm   375 sec   (2107 perm/sec)   p_kst 5.468354e-04   p_cons 9.973278e-01   p_joint 5.468354e-04

Joint ci ratio: 1.872534e-01	ci left: 4.962409e-04	ci right 5.999311e-04	k: 437	n:800000
Cons ci ratio: 2.264987e-04	ci left: 9.972221e-01	ci right 9.974492e-01	k: 797870	n:800000
KS ci ratio: 1.872534e-01	ci left: 4.962409e-04	ci right 5.999311e-04	k: 437	n:800000
KCNN2   800000 perm   382 sec   (2092 perm/sec)   p_kst 5.462500e-04   p_cons 9.973375e-01   p_joint 5.462500e-04

Joint ci ratio: 1.861938e-01	ci left: 4.959988e-04	ci right 5.989856e-04	k: 442	n:810000
Cons ci ratio: 2.245391e-04	ci left: 9.972363e-01	ci right 9.974614e-01	k: 807854	n:810000
KS ci ratio: 1.861938e-01	ci left: 4.959988e-04	ci right 5.989856e-04	k: 442	n:810000
KCNN2   810000 perm   390 sec   (2077 perm/sec)   p_kst 5.456790e-04   p_cons 9.973506e-01   p_joint 5.456790e-04

Joint ci ratio: 1.855668e-01	ci left: 4.934383e-04	ci right 5.955096e-04	k: 445	n:820000
Cons ci ratio: 2.235512e-04	ci left: 9.972276e-01	ci right 9.974518e-01	k: 817820	n:820000
KS ci ratio: 1.855668e-01	ci left: 4.934383e-04	ci right 5.955096e-04	k: 445	n:820000
KCNN2   820000 perm   398 sec   (2062 perm/sec)   p_kst 5.426829e-04   p_cons 9.973415e-01   p_joint 5.426829e-04

Joint ci ratio: 1.845353e-01	ci left: 4.932383e-04	ci right 5.946376e-04	k: 450	n:830000
Cons ci ratio: 2.219683e-04	ci left: 9.972340e-01	ci right 9.974565e-01	k: 827798	n:830000
KS ci ratio: 1.845353e-01	ci left: 4.932383e-04	ci right 5.946376e-04	k: 450	n:830000
KCNN2   830000 perm   406 sec   (2047 perm/sec)   p_kst 5.421687e-04   p_cons 9.973470e-01   p_joint 5.421687e-04

Joint ci ratio: 1.829198e-01	ci left: 4.964523e-04	ci right 5.975199e-04	k: 458	n:840000
Cons ci ratio: 2.207155e-04	ci left: 9.972329e-01	ci right 9.974542e-01	k: 837770	n:840000
KS ci ratio: 1.829198e-01	ci left: 4.964523e-04	ci right 5.975199e-04	k: 458	n:840000
KCNN2   840000 perm   413 sec   (2032 perm/sec)   p_kst 5.452381e-04   p_cons 9.973452e-01   p_joint 5.452381e-04

Joint ci ratio: 1.811521e-01	ci left: 5.007175e-04	ci right 6.015603e-04	k: 467	n:850000
Cons ci ratio: 2.194348e-04	ci left: 9.972330e-01	ci right 9.974530e-01	k: 847743	n:850000
KS ci ratio: 1.811521e-01	ci left: 5.007175e-04	ci right 6.015603e-04	k: 467	n:850000
KCNN2   850000 perm   421 sec   (2017 perm/sec)   p_kst 5.494118e-04   p_cons 9.973447e-01   p_joint 5.494118e-04

Joint ci ratio: 1.792467e-01	ci left: 5.059988e-04	ci right 6.067171e-04	k: 477	n:860000
Cons ci ratio: 2.179845e-04	ci left: 9.972379e-01	ci right 9.974564e-01	k: 857720	n:860000
KS ci ratio: 1.792467e-01	ci left: 5.059988e-04	ci right 6.067171e-04	k: 477	n:860000
KCNN2   860000 perm   429 sec   (2003 perm/sec)   p_kst 5.546512e-04   p_cons 9.973488e-01   p_joint 5.546512e-04

Joint ci ratio: 1.779483e-01	ci left: 5.078690e-04	ci right 6.081485e-04	k: 484	n:870000
Cons ci ratio: 2.170329e-04	ci left: 9.972309e-01	ci right 9.974485e-01	k: 867687	n:870000
KS ci ratio: 1.779483e-01	ci left: 5.078690e-04	ci right 6.081485e-04	k: 484	n:870000
KCNN2   870000 perm   437 sec   (1989 perm/sec)   p_kst 5.563218e-04   p_cons 9.973414e-01   p_joint 5.563218e-04

Joint ci ratio: 1.775829e-01	ci left: 5.042693e-04	ci right 6.036116e-04	k: 486	n:880000
Cons ci ratio: 2.159073e-04	ci left: 9.972288e-01	ci right 9.974452e-01	k: 877658	n:880000
KS ci ratio: 1.775829e-01	ci left: 5.042693e-04	ci right 6.036116e-04	k: 486	n:880000
KCNN2   880000 perm   446 sec   (1975 perm/sec)   p_kst 5.522727e-04   p_cons 9.973386e-01   p_joint 5.522727e-04

Joint ci ratio: 1.770387e-01	ci left: 5.018245e-04	ci right 6.003498e-04	k: 489	n:890000
Cons ci ratio: 2.149349e-04	ci left: 9.972232e-01	ci right 9.974387e-01	k: 887626	n:890000
KS ci ratio: 1.770387e-01	ci left: 5.018245e-04	ci right 6.003498e-04	k: 489	n:890000
KCNN2   890000 perm   454 sec   (1962 perm/sec)   p_kst 5.494382e-04   p_cons 9.973326e-01   p_joint 5.494382e-04

Joint ci ratio: 1.763206e-01	ci left: 5.004966e-04	ci right 5.983200e-04	k: 493	n:900000
Cons ci ratio: 2.138853e-04	ci left: 9.972201e-01	ci right 9.974345e-01	k: 897596	n:900000
KS ci ratio: 1.763206e-01	ci left: 5.004966e-04	ci right 5.983200e-04	k: 493	n:900000
KCNN2   900000 perm   462 sec   (1949 perm/sec)   p_kst 5.477778e-04   p_cons 9.973289e-01   p_joint 5.477778e-04

Joint ci ratio: 1.759651e-01	ci left: 4.970974e-04	ci right 5.940398e-04	k: 495	n:910000
Cons ci ratio: 2.128506e-04	ci left: 9.972170e-01	ci right 9.974304e-01	k: 907566	n:910000
KS ci ratio: 1.759651e-01	ci left: 4.970974e-04	ci right 5.940398e-04	k: 495	n:910000
KCNN2   910000 perm   470 sec   (1935 perm/sec)   p_kst 5.439560e-04   p_cons 9.973253e-01   p_joint 5.439560e-04

Joint ci ratio: 1.752600e-01	ci left: 4.958509e-04	ci right 5.921216e-04	k: 499	n:920000
Cons ci ratio: 2.114854e-04	ci left: 9.972229e-01	ci right 9.974348e-01	k: 917544	n:920000
KS ci ratio: 1.752600e-01	ci left: 4.958509e-04	ci right 5.921216e-04	k: 499	n:920000
KCNN2   920000 perm   479 sec   (1922 perm/sec)   p_kst 5.423913e-04   p_cons 9.973304e-01   p_joint 5.423913e-04

Joint ci ratio: 1.733628e-01	ci left: 5.018312e-04	ci right 5.980980e-04	k: 510	n:930000
Cons ci ratio: 2.101454e-04	ci left: 9.972286e-01	ci right 9.974392e-01	k: 927522	n:930000
KS ci ratio: 1.733628e-01	ci left: 5.018312e-04	ci right 5.980980e-04	k: 510	n:930000
KCNN2   930000 perm   487 sec   (1909 perm/sec)   p_kst 5.483871e-04   p_cons 9.973355e-01   p_joint 5.483871e-04

Joint ci ratio: 1.726884e-01	ci left: 5.005636e-04	ci right 5.961748e-04	k: 514	n:940000
Cons ci ratio: 2.094150e-04	ci left: 9.972190e-01	ci right 9.974289e-01	k: 937486	n:940000
KS ci ratio: 1.726884e-01	ci left: 5.005636e-04	ci right 5.961748e-04	k: 514	n:940000
KCNN2   940000 perm   496 sec   (1896 perm/sec)   p_kst 5.468085e-04   p_cons 9.973255e-01   p_joint 5.468085e-04

Joint ci ratio: 1.718562e-01	ci left: 5.003307e-04	ci right 5.953891e-04	k: 519	n:950000
Cons ci ratio: 2.080733e-04	ci left: 9.972258e-01	ci right 9.974343e-01	k: 947465	n:950000
KS ci ratio: 1.718562e-01	ci left: 5.003307e-04	ci right 5.953891e-04	k: 519	n:950000
KCNN2   950000 perm   505 sec   (1882 perm/sec)   p_kst 5.463158e-04   p_cons 9.973316e-01   p_joint 5.463158e-04

Joint ci ratio: 1.703877e-01	ci left: 5.040925e-04	ci right 5.989632e-04	k: 528	n:960000
Cons ci ratio: 2.068371e-04	ci left: 9.972303e-01	ci right 9.974376e-01	k: 957442	n:960000
KS ci ratio: 1.703877e-01	ci left: 5.040925e-04	ci right 5.989632e-04	k: 528	n:960000
KCNN2   960000 perm   513 sec   (1870 perm/sec)   p_kst 5.500000e-04   p_cons 9.973354e-01   p_joint 5.500000e-04

Joint ci ratio: 1.694295e-01	ci left: 5.048182e-04	ci right 5.992366e-04	k: 534	n:970000
Cons ci ratio: 2.056223e-04	ci left: 9.972346e-01	ci right 9.974407e-01	k: 967419	n:970000
KS ci ratio: 1.694295e-01	ci left: 5.048182e-04	ci right 5.992366e-04	k: 534	n:970000
KCNN2   970000 perm   522 sec   (1857 perm/sec)   p_kst 5.505155e-04   p_cons 9.973392e-01   p_joint 5.505155e-04

Joint ci ratio: 1.686434e-01	ci left: 5.045532e-04	ci right 5.984397e-04	k: 539	n:980000
Cons ci ratio: 2.046641e-04	ci left: 9.972327e-01	ci right 9.974378e-01	k: 977390	n:980000
KS ci ratio: 1.686434e-01	ci left: 5.045532e-04	ci right 5.984397e-04	k: 539	n:980000
KCNN2   980000 perm   531 sec   (1845 perm/sec)   p_kst 5.500000e-04   p_cons 9.973367e-01   p_joint 5.500000e-04

Joint ci ratio: 1.678680e-01	ci left: 5.042946e-04	ci right 5.976578e-04	k: 544	n:990000
Cons ci ratio: 2.039896e-04	ci left: 9.972236e-01	ci right 9.974280e-01	k: 987354	n:990000
KS ci ratio: 1.678680e-01	ci left: 5.042946e-04	ci right 5.976578e-04	k: 544	n:990000
KCNN2   990000 perm   540 sec   (1832 perm/sec)   p_kst 5.494949e-04   p_cons 9.973273e-01   p_joint 5.494949e-04

Joint ci ratio: 1.672555e-01	ci left: 5.030838e-04	ci right 5.958489e-04	k: 548	n:1000000
Cons ci ratio: 2.026343e-04	ci left: 9.972330e-01	ci right 9.974361e-01	k: 997336	n:1000000
KS ci ratio: 1.672555e-01	ci left: 5.030838e-04	ci right 5.958489e-04	k: 548	n:1000000
KCNN2   1000000 perm   549 sec   (1820 perm/sec)   p_kst 5.480000e-04   p_cons 9.973360e-01   p_joint 5.480000e-04

Joint ci ratio: 1.666496e-01	ci left: 5.018977e-04	ci right 5.940751e-04	k: 552	n:1010000
Cons ci ratio: 2.018670e-04	ci left: 9.972271e-01	ci right 9.974294e-01	k: 1007303	n:1010000
KS ci ratio: 1.666496e-01	ci left: 5.018977e-04	ci right 5.940751e-04	k: 552	n:1010000
KCNN2   1010000 perm   559 sec   (1807 perm/sec)   p_kst 5.465347e-04   p_cons 9.973297e-01   p_joint 5.465347e-04

Joint ci ratio: 1.656047e-01	ci left: 5.035546e-04	ci right 5.953986e-04	k: 559	n:1020000
Cons ci ratio: 2.005158e-04	ci left: 9.972373e-01	ci right 9.974383e-01	k: 1017286	n:1020000
KS ci ratio: 1.656047e-01	ci left: 5.035546e-04	ci right 5.953986e-04	k: 559	n:1020000
KCNN2   1020000 perm   568 sec   (1796 perm/sec)   p_kst 5.480392e-04   p_cons 9.973392e-01   p_joint 5.480392e-04

Joint ci ratio: 1.645791e-01	ci left: 5.051811e-04	ci right 5.966947e-04	k: 566	n:1030000
Cons ci ratio: 1.993349e-04	ci left: 9.972434e-01	ci right 9.974431e-01	k: 1027265	n:1030000
KS ci ratio: 1.645791e-01	ci left: 5.051811e-04	ci right 5.966947e-04	k: 566	n:1030000
KCNN2   1030000 perm   577 sec   (1784 perm/sec)   p_kst 5.495146e-04   p_cons 9.973447e-01   p_joint 5.495146e-04

Joint ci ratio: 1.644345e-01	ci left: 5.012454e-04	ci right 5.919584e-04	k: 567	n:1040000
Cons ci ratio: 1.979937e-04	ci left: 9.972542e-01	ci right 9.974526e-01	k: 1037249	n:1040000
KS ci ratio: 1.644345e-01	ci left: 5.012454e-04	ci right 5.919584e-04	k: 567	n:1040000
KCNN2   1040000 perm   587 sec   (1772 perm/sec)   p_kst 5.451923e-04   p_cons 9.973548e-01   p_joint 5.451923e-04

Joint ci ratio: 1.638587e-01	ci left: 5.001247e-04	ci right 5.902866e-04	k: 571	n:1050000
Cons ci ratio: 1.969966e-04	ci left: 9.972561e-01	ci right 9.974535e-01	k: 1047224	n:1050000
KS ci ratio: 1.638587e-01	ci left: 5.001247e-04	ci right 5.902866e-04	k: 571	n:1050000
KCNN2   1050000 perm   596 sec   (1761 perm/sec)   p_kst 5.438095e-04   p_cons 9.973562e-01   p_joint 5.438095e-04

Joint ci ratio: 1.630060e-01	ci left: 5.008354e-04	ci right 5.906096e-04	k: 577	n:1060000
Cons ci ratio: 1.959092e-04	ci left: 9.972609e-01	ci right 9.974572e-01	k: 1057202	n:1060000
KS ci ratio: 1.630060e-01	ci left: 5.008354e-04	ci right 5.906096e-04	k: 577	n:1060000
KCNN2   1060000 perm   606 sec   (1750 perm/sec)   p_kst 5.443396e-04   p_cons 9.973604e-01   p_joint 5.443396e-04

Joint ci ratio: 1.624450e-01	ci left: 4.997408e-04	ci right 5.889803e-04	k: 581	n:1070000
Cons ci ratio: 1.952541e-04	ci left: 9.972541e-01	ci right 9.974497e-01	k: 1067168	n:1070000
KS ci ratio: 1.624450e-01	ci left: 4.997408e-04	ci right 5.889803e-04	k: 581	n:1070000
KCNN2   1070000 perm   615 sec   (1739 perm/sec)   p_kst 5.429907e-04   p_cons 9.973533e-01   p_joint 5.429907e-04

Joint ci ratio: 1.606600e-01	ci left: 5.066641e-04	ci right 5.960498e-04	k: 594	n:1080000
Cons ci ratio: 1.941955e-04	ci left: 9.972588e-01	ci right 9.974534e-01	k: 1077146	n:1080000
KS ci ratio: 1.606600e-01	ci left: 5.066641e-04	ci right 5.960498e-04	k: 594	n:1080000
KCNN2   1080000 perm   625 sec   (1728 perm/sec)   p_kst 5.500000e-04   p_cons 9.973574e-01   p_joint 5.500000e-04

Joint ci ratio: 1.599892e-01	ci left: 5.064189e-04	ci right 5.953525e-04	k: 599	n:1090000
Cons ci ratio: 1.932544e-04	ci left: 9.972606e-01	ci right 9.974542e-01	k: 1087121	n:1090000
KS ci ratio: 1.599892e-01	ci left: 5.064189e-04	ci right 5.953525e-04	k: 599	n:1090000
KCNN2   1090000 perm   635 sec   (1717 perm/sec)   p_kst 5.495413e-04   p_cons 9.973587e-01   p_joint 5.495413e-04

Joint ci ratio: 1.591952e-01	ci left: 5.070518e-04	ci right 5.956124e-04	k: 605	n:1100000
Cons ci ratio: 1.921607e-04	ci left: 9.972670e-01	ci right 9.974595e-01	k: 1097101	n:1100000
KS ci ratio: 1.591952e-01	ci left: 5.070518e-04	ci right 5.956124e-04	k: 605	n:1100000
KCNN2   1100000 perm   645 sec   (1706 perm/sec)   p_kst 5.500000e-04   p_cons 9.973645e-01   p_joint 5.500000e-04

Joint ci ratio: 1.586725e-01	ci left: 5.059441e-04	ci right 5.939934e-04	k: 609	n:1110000
Cons ci ratio: 1.910845e-04	ci left: 9.972732e-01	ci right 9.974647e-01	k: 1107081	n:1110000
KS ci ratio: 1.586725e-01	ci left: 5.059441e-04	ci right 5.939934e-04	k: 609	n:1110000
KCNN2   1110000 perm   655 sec   (1696 perm/sec)   p_kst 5.486486e-04   p_cons 9.973703e-01   p_joint 5.486486e-04

Joint ci ratio: 1.582839e-01	ci left: 5.039990e-04	ci right 5.914746e-04	k: 612	n:1120000
Cons ci ratio: 1.905108e-04	ci left: 9.972658e-01	ci right 9.974566e-01	k: 1117046	n:1120000
KS ci ratio: 1.582839e-01	ci left: 5.039990e-04	ci right 5.914746e-04	k: 612	n:1120000
KCNN2   1120000 perm   664 sec   (1686 perm/sec)   p_kst 5.464286e-04   p_cons 9.973625e-01   p_joint 5.464286e-04

Joint ci ratio: 1.575149e-01	ci left: 5.046388e-04	ci right 5.917597e-04	k: 618	n:1130000
Cons ci ratio: 1.896218e-04	ci left: 9.972674e-01	ci right 9.974574e-01	k: 1127021	n:1130000
KS ci ratio: 1.575149e-01	ci left: 5.046388e-04	ci right 5.917597e-04	k: 618	n:1130000
KCNN2   1130000 perm   674 sec   (1676 perm/sec)   p_kst 5.469027e-04   p_cons 9.973637e-01   p_joint 5.469027e-04

Joint ci ratio: 1.570085e-01	ci left: 5.035828e-04	ci right 5.902156e-04	k: 622	n:1140000
Cons ci ratio: 1.889025e-04	ci left: 9.972646e-01	ci right 9.974539e-01	k: 1136991	n:1140000
KS ci ratio: 1.570085e-01	ci left: 5.035828e-04	ci right 5.902156e-04	k: 622	n:1140000
KCNN2   1140000 perm   684 sec   (1666 perm/sec)   p_kst 5.456140e-04   p_cons 9.973605e-01   p_joint 5.456140e-04

Joint ci ratio: 1.562578e-01	ci left: 5.042167e-04	ci right 5.905050e-04	k: 628	n:1150000
Cons ci ratio: 1.880047e-04	ci left: 9.972672e-01	ci right 9.974555e-01	k: 1146967	n:1150000
KS ci ratio: 1.562578e-01	ci left: 5.042167e-04	ci right 5.905050e-04	k: 628	n:1150000
KCNN2   1150000 perm   694 sec   (1656 perm/sec)   p_kst 5.460870e-04   p_cons 9.973626e-01   p_joint 5.460870e-04

Joint ci ratio: 1.551515e-01	ci left: 5.073264e-04	ci right 5.934750e-04	k: 637	n:1160000
Cons ci ratio: 1.871502e-04	ci left: 9.972688e-01	ci right 9.974563e-01	k: 1156942	n:1160000
KS ci ratio: 1.551515e-01	ci left: 5.073264e-04	ci right 5.934750e-04	k: 637	n:1160000
KCNN2   1160000 perm   704 sec   (1647 perm/sec)   p_kst 5.491379e-04   p_cons 9.973638e-01   p_joint 5.491379e-04

Joint ci ratio: 1.544271e-01	ci left: 5.079199e-04	ci right 5.937293e-04	k: 643	n:1170000
Cons ci ratio: 1.863980e-04	ci left: 9.972678e-01	ci right 9.974545e-01	k: 1166914	n:1170000
KS ci ratio: 1.544271e-01	ci left: 5.079199e-04	ci right 5.937293e-04	k: 643	n:1170000
KCNN2   1170000 perm   714 sec   (1638 perm/sec)   p_kst 5.495726e-04   p_cons 9.973624e-01   p_joint 5.495726e-04

Joint ci ratio: 1.535945e-01	ci left: 5.093191e-04	ci right 5.948583e-04	k: 650	n:1180000
Cons ci ratio: 1.855950e-04	ci left: 9.972685e-01	ci right 9.974544e-01	k: 1176888	n:1180000
KS ci ratio: 1.535945e-01	ci left: 5.093191e-04	ci right 5.948583e-04	k: 650	n:1180000
KCNN2   1180000 perm   725 sec   (1628 perm/sec)   p_kst 5.508475e-04   p_cons 9.973627e-01   p_joint 5.508475e-04

Joint ci ratio: 1.532419e-01	ci left: 5.074633e-04	ci right 5.924772e-04	k: 653	n:1190000
Cons ci ratio: 1.844478e-04	ci left: 9.972795e-01	ci right 9.974643e-01	k: 1186874	n:1190000
KS ci ratio: 1.532419e-01	ci left: 5.074633e-04	ci right 5.924772e-04	k: 653	n:1190000
KCNN2   1190000 perm   735 sec   (1619 perm/sec)   p_kst 5.487395e-04   p_cons 9.973731e-01   p_joint 5.487395e-04

Joint ci ratio: 1.528918e-01	ci left: 5.056387e-04	ci right 5.901356e-04	k: 656	n:1200000
Cons ci ratio: 1.838155e-04	ci left: 9.972759e-01	ci right 9.974600e-01	k: 1196843	n:1200000
KS ci ratio: 1.528918e-01	ci left: 5.056387e-04	ci right 5.901356e-04	k: 656	n:1200000
KCNN2   1200000 perm   745 sec   (1610 perm/sec)   p_kst 5.466667e-04   p_cons 9.973692e-01   p_joint 5.466667e-04

Joint ci ratio: 1.515140e-01	ci left: 5.109996e-04	ci right 5.955531e-04	k: 668	n:1210000
Cons ci ratio: 1.831893e-04	ci left: 9.972723e-01	ci right 9.974558e-01	k: 1206812	n:1210000
KS ci ratio: 1.515140e-01	ci left: 5.109996e-04	ci right 5.955531e-04	k: 668	n:1210000
KCNN2   1210000 perm   756 sec   (1600 perm/sec)   p_kst 5.520661e-04   p_cons 9.973653e-01   p_joint 5.520661e-04

Joint ci ratio: 1.509510e-01	ci left: 5.107543e-04	ci right 5.949249e-04	k: 673	n:1220000
Cons ci ratio: 1.824269e-04	ci left: 9.972730e-01	ci right 9.974558e-01	k: 1216786	n:1220000
KS ci ratio: 1.509510e-01	ci left: 5.107543e-04	ci right 5.949249e-04	k: 673	n:1220000
KCNN2   1220000 perm   767 sec   (1591 perm/sec)   p_kst 5.516393e-04   p_cons 9.973656e-01   p_joint 5.516393e-04

Joint ci ratio: 1.501731e-01	ci left: 5.120786e-04	ci right 5.959933e-04	k: 680	n:1230000
Cons ci ratio: 1.816739e-04	ci left: 9.972737e-01	ci right 9.974557e-01	k: 1226760	n:1230000
KS ci ratio: 1.501731e-01	ci left: 5.120786e-04	ci right 5.959933e-04	k: 680	n:1230000
KCNN2   1230000 perm   777 sec   (1582 perm/sec)   p_kst 5.528455e-04   p_cons 9.973659e-01   p_joint 5.528455e-04

Joint ci ratio: 1.497341e-01	ci left: 5.110536e-04	ci right 5.945337e-04	k: 684	n:1240000
Cons ci ratio: 1.808746e-04	ci left: 9.972760e-01	ci right 9.974572e-01	k: 1236736	n:1240000
KS ci ratio: 1.497341e-01	ci left: 5.110536e-04	ci right 5.945337e-04	k: 684	n:1240000
KCNN2   1240000 perm   788 sec   (1573 perm/sec)   p_kst 5.516129e-04   p_cons 9.973677e-01   p_joint 5.516129e-04

Joint ci ratio: 1.490825e-01	ci left: 5.115858e-04	ci right 5.947568e-04	k: 690	n:1250000
Cons ci ratio: 1.799209e-04	ci left: 9.972831e-01	ci right 9.974634e-01	k: 1246718	n:1250000
KS ci ratio: 1.490825e-01	ci left: 5.115858e-04	ci right 5.947568e-04	k: 690	n:1250000
KCNN2   1250000 perm   799 sec   (1565 perm/sec)   p_kst 5.520000e-04   p_cons 9.973744e-01   p_joint 5.520000e-04

Joint ci ratio: 1.484395e-01	ci left: 5.121102e-04	ci right 5.949755e-04	k: 696	n:1260000
Cons ci ratio: 1.791712e-04	ci left: 9.972845e-01	ci right 9.974640e-01	k: 1256693	n:1260000
KS ci ratio: 1.484395e-01	ci left: 5.121102e-04	ci right 5.949755e-04	k: 696	n:1260000
KCNN2   1260000 perm   810 sec   (1556 perm/sec)   p_kst 5.523810e-04   p_cons 9.973754e-01   p_joint 5.523810e-04

Joint ci ratio: 1.473857e-01	ci left: 5.156606e-04	ci right 5.984558e-04	k: 706	n:1270000
Cons ci ratio: 1.785381e-04	ci left: 9.972827e-01	ci right 9.974615e-01	k: 1266664	n:1270000
KS ci ratio: 1.473857e-01	ci left: 5.156606e-04	ci right 5.984558e-04	k: 706	n:1270000
KCNN2   1270000 perm   821 sec   (1547 perm/sec)   p_kst 5.559055e-04   p_cons 9.973732e-01   p_joint 5.559055e-04

Joint ci ratio: 1.468673e-01	ci left: 5.153944e-04	ci right 5.978303e-04	k: 711	n:1280000
Cons ci ratio: 1.778585e-04	ci left: 9.972824e-01	ci right 9.974606e-01	k: 1276637	n:1280000
KS ci ratio: 1.468673e-01	ci left: 5.153944e-04	ci right 5.978303e-04	k: 711	n:1280000
KCNN2   1280000 perm   832 sec   (1539 perm/sec)   p_kst 5.554687e-04   p_cons 9.973727e-01   p_joint 5.554687e-04

Joint ci ratio: 1.463543e-01	ci left: 5.151329e-04	ci right 5.972140e-04	k: 716	n:1290000
Cons ci ratio: 1.771604e-04	ci left: 9.972830e-01	ci right 9.974605e-01	k: 1286611	n:1290000
KS ci ratio: 1.463543e-01	ci left: 5.151329e-04	ci right 5.972140e-04	k: 716	n:1290000
KCNN2   1290000 perm   843 sec   (1530 perm/sec)   p_kst 5.550388e-04   p_cons 9.973729e-01   p_joint 5.550388e-04

Joint ci ratio: 1.459479e-01	ci left: 5.141347e-04	ci right 5.958094e-04	k: 720	n:1300000
Cons ci ratio: 1.763410e-04	ci left: 9.972875e-01	ci right 9.974641e-01	k: 1296590	n:1300000
KS ci ratio: 1.459479e-01	ci left: 5.141347e-04	ci right 5.958094e-04	k: 720	n:1300000
KCNN2   1300000 perm   854 sec   (1521 perm/sec)   p_kst 5.538462e-04   p_cons 9.973769e-01   p_joint 5.538462e-04

Joint ci ratio: 1.454445e-01	ci left: 5.138877e-04	ci right 5.952171e-04	k: 725	n:1310000
Cons ci ratio: 1.760189e-04	ci left: 9.972772e-01	ci right 9.974535e-01	k: 1306550	n:1310000
KS ci ratio: 1.454445e-01	ci left: 5.138877e-04	ci right 5.952171e-04	k: 725	n:1310000
KCNN2   1310000 perm   866 sec   (1513 perm/sec)   p_kst 5.534351e-04   p_cons 9.973664e-01   p_joint 5.534351e-04

Joint ci ratio: 1.446496e-01	ci left: 5.158353e-04	ci right 5.969882e-04	k: 733	n:1320000
Cons ci ratio: 1.753927e-04	ci left: 9.972762e-01	ci right 9.974519e-01	k: 1316522	n:1320000
KS ci ratio: 1.446496e-01	ci left: 5.158353e-04	ci right 5.969882e-04	k: 733	n:1320000
KCNN2   1320000 perm   877 sec   (1505 perm/sec)   p_kst 5.553030e-04   p_cons 9.973652e-01   p_joint 5.553030e-04

Joint ci ratio: 1.443550e-01	ci left: 5.141309e-04	ci right 5.948368e-04	k: 736	n:1330000
Cons ci ratio: 1.747732e-04	ci left: 9.972753e-01	ci right 9.974503e-01	k: 1326494	n:1330000
KS ci ratio: 1.443550e-01	ci left: 5.141309e-04	ci right 5.948368e-04	k: 736	n:1330000
KCNN2   1330000 perm   888 sec   (1498 perm/sec)   p_kst 5.533835e-04   p_cons 9.973639e-01   p_joint 5.533835e-04

Joint ci ratio: 1.438678e-01	ci left: 5.138909e-04	ci right 5.942635e-04	k: 741	n:1340000
Cons ci ratio: 1.740366e-04	ci left: 9.972782e-01	ci right 9.974525e-01	k: 1336471	n:1340000
KS ci ratio: 1.438678e-01	ci left: 5.138909e-04	ci right 5.942635e-04	k: 741	n:1340000
KCNN2   1340000 perm   900 sec   (1489 perm/sec)   p_kst 5.529851e-04   p_cons 9.973664e-01   p_joint 5.529851e-04

Joint ci ratio: 1.434817e-01	ci left: 5.129407e-04	ci right 5.929310e-04	k: 745	n:1350000
Cons ci ratio: 1.732357e-04	ci left: 9.972833e-01	ci right 9.974568e-01	k: 1346451	n:1350000
KS ci ratio: 1.434817e-01	ci left: 5.129407e-04	ci right 5.929310e-04	k: 745	n:1350000
KCNN2   1350000 perm   911 sec   (1482 perm/sec)   p_kst 5.518519e-04   p_cons 9.973711e-01   p_joint 5.518519e-04

Joint ci ratio: 1.426237e-01	ci left: 5.155499e-04	ci right 5.954255e-04	k: 754	n:1360000
Cons ci ratio: 1.723726e-04	ci left: 9.972906e-01	ci right 9.974632e-01	k: 1356434	n:1360000
KS ci ratio: 1.426237e-01	ci left: 5.155499e-04	ci right 5.954255e-04	k: 754	n:1360000
KCNN2   1360000 perm   923 sec   (1474 perm/sec)   p_kst 5.544118e-04   p_cons 9.973779e-01   p_joint 5.544118e-04

Joint ci ratio: 1.419671e-01	ci left: 5.167144e-04	ci right 5.963705e-04	k: 761	n:1370000
Cons ci ratio: 1.716889e-04	ci left: 9.972925e-01	ci right 9.974645e-01	k: 1366410	n:1370000
KS ci ratio: 1.419671e-01	ci left: 5.167144e-04	ci right 5.963705e-04	k: 761	n:1370000
KCNN2   1370000 perm   935 sec   (1466 perm/sec)   p_kst 5.554745e-04   p_cons 9.973796e-01   p_joint 5.554745e-04

Joint ci ratio: 1.413194e-01	ci left: 5.178628e-04	ci right 5.973011e-04	k: 768	n:1380000
Cons ci ratio: 1.711081e-04	ci left: 9.972915e-01	ci right 9.974629e-01	k: 1376382	n:1380000
KS ci ratio: 1.413194e-01	ci left: 5.178628e-04	ci right 5.973011e-04	k: 768	n:1380000
KCNN2   1380000 perm   947 sec   (1458 perm/sec)   p_kst 5.565217e-04   p_cons 9.973783e-01   p_joint 5.565217e-04

Joint ci ratio: 1.408622e-01	ci left: 5.176073e-04	ci right 5.967280e-04	k: 773	n:1390000
Cons ci ratio: 1.704628e-04	ci left: 9.972927e-01	ci right 9.974635e-01	k: 1386357	n:1390000
KS ci ratio: 1.408622e-01	ci left: 5.176073e-04	ci right 5.967280e-04	k: 773	n:1390000
KCNN2   1390000 perm   959 sec   (1449 perm/sec)   p_kst 5.561151e-04   p_cons 9.973791e-01   p_joint 5.561151e-04

Joint ci ratio: 1.405901e-01	ci left: 5.159775e-04	ci right 5.946839e-04	k: 776	n:1400000
Cons ci ratio: 1.700334e-04	ci left: 9.972874e-01	ci right 9.974577e-01	k: 1396323	n:1400000
KS ci ratio: 1.405901e-01	ci left: 5.159775e-04	ci right 5.946839e-04	k: 776	n:1400000
KCNN2   1400000 perm   972 sec   (1441 perm/sec)   p_kst 5.542857e-04   p_cons 9.973736e-01   p_joint 5.542857e-04

Joint ci ratio: 1.402297e-01	ci left: 5.150553e-04	ci right 5.934028e-04	k: 780	n:1410000
Cons ci ratio: 1.694461e-04	ci left: 9.972872e-01	ci right 9.974569e-01	k: 1406296	n:1410000
KS ci ratio: 1.402297e-01	ci left: 5.150553e-04	ci right 5.934028e-04	k: 780	n:1410000
KCNN2   1410000 perm   984 sec   (1433 perm/sec)   p_kst 5.531915e-04   p_cons 9.973730e-01   p_joint 5.531915e-04

Joint ci ratio: 1.394285e-01	ci left: 5.175445e-04	ci right 5.957835e-04	k: 789	n:1420000
Cons ci ratio: 1.690235e-04	ci left: 9.972820e-01	ci right 9.974512e-01	k: 1416262	n:1420000
KS ci ratio: 1.394285e-01	ci left: 5.175445e-04	ci right 5.957835e-04	k: 789	n:1420000
KCNN2   1420000 perm   996 sec   (1425 perm/sec)   p_kst 5.556338e-04   p_cons 9.973676e-01   p_joint 5.556338e-04

Joint ci ratio: 1.389894e-01	ci left: 5.173001e-04	ci right 5.952354e-04	k: 794	n:1430000
Cons ci ratio: 1.683344e-04	ci left: 9.972853e-01	ci right 9.974539e-01	k: 1426240	n:1430000
KS ci ratio: 1.389894e-01	ci left: 5.173001e-04	ci right 5.952354e-04	k: 794	n:1430000
KCNN2   1430000 perm   1009 sec   (1418 perm/sec)   p_kst 5.552448e-04   p_cons 9.973706e-01   p_joint 5.552448e-04

Joint ci ratio: 1.387280e-01	ci left: 5.157186e-04	ci right 5.932575e-04	k: 797	n:1440000
Cons ci ratio: 1.677422e-04	ci left: 9.972858e-01	ci right 9.974538e-01	k: 1436214	n:1440000
KS ci ratio: 1.387280e-01	ci left: 5.157186e-04	ci right 5.932575e-04	k: 797	n:1440000
KCNN2   1440000 perm   1021 sec   (1410 perm/sec)   p_kst 5.534722e-04   p_cons 9.973708e-01   p_joint 5.534722e-04

Joint ci ratio: 1.380377e-01	ci left: 5.174882e-04	ci right 5.948742e-04	k: 805	n:1450000
Cons ci ratio: 1.671122e-04	ci left: 9.972877e-01	ci right 9.974551e-01	k: 1446190	n:1450000
KS ci ratio: 1.380377e-01	ci left: 5.174882e-04	ci right 5.948742e-04	k: 805	n:1450000
KCNN2   1450000 perm   1034 sec   (1402 perm/sec)   p_kst 5.551724e-04   p_cons 9.973724e-01   p_joint 5.551724e-04

Joint ci ratio: 1.372732e-01	ci left: 5.198959e-04	ci right 5.971762e-04	k: 814	n:1460000
Cons ci ratio: 1.665981e-04	ci left: 9.972861e-01	ci right 9.974530e-01	k: 1456161	n:1460000
KS ci ratio: 1.372732e-01	ci left: 5.198959e-04	ci right 5.971762e-04	k: 814	n:1460000
KCNN2   1460000 perm   1047 sec   (1395 perm/sec)   p_kst 5.575342e-04   p_cons 9.973705e-01   p_joint 5.575342e-04

Joint ci ratio: 1.369377e-01	ci left: 5.189869e-04	ci right 5.959281e-04	k: 818	n:1470000
Cons ci ratio: 1.661746e-04	ci left: 9.972818e-01	ci right 9.974482e-01	k: 1466128	n:1470000
KS ci ratio: 1.369377e-01	ci left: 5.189869e-04	ci right 5.959281e-04	k: 818	n:1470000
KCNN2   1470000 perm   1060 sec   (1387 perm/sec)   p_kst 5.564626e-04   p_cons 9.973660e-01   p_joint 5.564626e-04

Joint ci ratio: 1.361913e-01	ci left: 5.213536e-04	ci right 5.981903e-04	k: 827	n:1480000
Cons ci ratio: 1.656261e-04	ci left: 9.972816e-01	ci right 9.974475e-01	k: 1476101	n:1480000
KS ci ratio: 1.361913e-01	ci left: 5.213536e-04	ci right 5.981903e-04	k: 827	n:1480000
KCNN2   1480000 perm   1072 sec   (1380 perm/sec)   p_kst 5.587838e-04   p_cons 9.973655e-01   p_joint 5.587838e-04

Joint ci ratio: 1.357005e-01	ci left: 5.217445e-04	ci right 5.983393e-04	k: 833	n:1490000
Cons ci ratio: 1.650620e-04	ci left: 9.972822e-01	ci right 9.974474e-01	k: 1486075	n:1490000
KS ci ratio: 1.357005e-01	ci left: 5.217445e-04	ci right 5.983393e-04	k: 833	n:1490000
KCNN2   1490000 perm   1085 sec   (1373 perm/sec)   p_kst 5.590604e-04   p_cons 9.973658e-01   p_joint 5.590604e-04

Joint ci ratio: 1.352955e-01	ci left: 5.214865e-04	ci right 5.977966e-04	k: 838	n:1500000
Cons ci ratio: 1.644201e-04	ci left: 9.972854e-01	ci right 9.974500e-01	k: 1496053	n:1500000
KS ci ratio: 1.352955e-01	ci left: 5.214865e-04	ci right 5.977966e-04	k: 838	n:1500000
KCNN2   1500000 perm   1098 sec   (1366 perm/sec)   p_kst 5.586667e-04   p_cons 9.973687e-01   p_joint 5.586667e-04

Joint ci ratio: 1.348942e-01	ci left: 5.212323e-04	ci right 5.972608e-04	k: 843	n:1510000
Cons ci ratio: 1.638888e-04	ci left: 9.972852e-01	ci right 9.974493e-01	k: 1506026	n:1510000
KS ci ratio: 1.348942e-01	ci left: 5.212323e-04	ci right 5.972608e-04	k: 843	n:1510000
KCNN2   1510000 perm   1110 sec   (1360 perm/sec)   p_kst 5.582781e-04   p_cons 9.973682e-01   p_joint 5.582781e-04

Joint ci ratio: 1.346552e-01	ci left: 5.197103e-04	ci right 5.953717e-04	k: 846	n:1520000
Cons ci ratio: 1.634036e-04	ci left: 9.972837e-01	ci right 9.974473e-01	k: 1515997	n:1520000
KS ci ratio: 1.346552e-01	ci left: 5.197103e-04	ci right 5.953717e-04	k: 846	n:1520000
KCNN2   1520000 perm   1123 sec   (1353 perm/sec)   p_kst 5.565789e-04   p_cons 9.973664e-01   p_joint 5.565789e-04

Joint ci ratio: 1.341022e-01	ci left: 5.207349e-04	ci right 5.962092e-04	k: 853	n:1530000
Cons ci ratio: 1.627199e-04	ci left: 9.972888e-01	ci right 9.974518e-01	k: 1525978	n:1530000
KS ci ratio: 1.341022e-01	ci left: 5.207349e-04	ci right 5.962092e-04	k: 853	n:1530000
KCNN2   1530000 perm   1136 sec   (1347 perm/sec)   p_kst 5.575163e-04   p_cons 9.973712e-01   p_joint 5.575163e-04

Joint ci ratio: 1.335558e-01	ci left: 5.217468e-04	ci right 5.970353e-04	k: 860	n:1540000
Cons ci ratio: 1.621246e-04	ci left: 9.972913e-01	ci right 9.974536e-01	k: 1535955	n:1540000
KS ci ratio: 1.335558e-01	ci left: 5.217468e-04	ci right 5.970353e-04	k: 860	n:1540000
KCNN2   1540000 perm   1149 sec   (1340 perm/sec)   p_kst 5.584416e-04   p_cons 9.973734e-01   p_joint 5.584416e-04

Joint ci ratio: 1.332468e-01	ci left: 5.208751e-04	ci right 5.958502e-04	k: 864	n:1550000
Cons ci ratio: 1.616351e-04	ci left: 9.972904e-01	ci right 9.974522e-01	k: 1545927	n:1550000
KS ci ratio: 1.332468e-01	ci left: 5.208751e-04	ci right 5.958502e-04	k: 864	n:1550000
KCNN2   1550000 perm   1162 sec   (1334 perm/sec)   p_kst 5.574194e-04   p_cons 9.973723e-01   p_joint 5.574194e-04

Joint ci ratio: 1.326347e-01	ci left: 5.224939e-04	ci right 5.973292e-04	k: 872	n:1560000
Cons ci ratio: 1.609332e-04	ci left: 9.972967e-01	ci right 9.974578e-01	k: 1555910	n:1560000
KS ci ratio: 1.326347e-01	ci left: 5.224939e-04	ci right 5.973292e-04	k: 872	n:1560000
KCNN2   1560000 perm   1175 sec   (1328 perm/sec)   p_kst 5.589744e-04   p_cons 9.973782e-01   p_joint 5.589744e-04

Joint ci ratio: 1.323320e-01	ci left: 5.216292e-04	ci right 5.961568e-04	k: 876	n:1570000
Cons ci ratio: 1.602396e-04	ci left: 9.973029e-01	ci right 9.974634e-01	k: 1565893	n:1570000
KS ci ratio: 1.323320e-01	ci left: 5.216292e-04	ci right 5.961568e-04	k: 876	n:1570000
KCNN2   1570000 perm   1188 sec   (1321 perm/sec)   p_kst 5.579618e-04   p_cons 9.973841e-01   p_joint 5.579618e-04

Joint ci ratio: 1.319564e-01	ci left: 5.213877e-04	ci right 5.956527e-04	k: 881	n:1580000
Cons ci ratio: 1.598253e-04	ci left: 9.973001e-01	ci right 9.974601e-01	k: 1575862	n:1580000
KS ci ratio: 1.319564e-01	ci left: 5.213877e-04	ci right 5.956527e-04	k: 881	n:1580000
KCNN2   1580000 perm   1201 sec   (1315 perm/sec)   p_kst 5.575949e-04   p_cons 9.973810e-01   p_joint 5.575949e-04

Joint ci ratio: 1.318072e-01	ci left: 5.193249e-04	ci right 5.932059e-04	k: 883	n:1590000
Cons ci ratio: 1.594140e-04	ci left: 9.972973e-01	ci right 9.974569e-01	k: 1585831	n:1590000
KS ci ratio: 1.318072e-01	ci left: 5.193249e-04	ci right 5.932059e-04	k: 883	n:1590000
KCNN2   1590000 perm   1215 sec   (1309 perm/sec)   p_kst 5.553459e-04   p_cons 9.973780e-01   p_joint 5.553459e-04

Joint ci ratio: 1.315100e-01	ci left: 5.184967e-04	ci right 5.920807e-04	k: 887	n:1600000
Cons ci ratio: 1.589487e-04	ci left: 9.972964e-01	ci right 9.974555e-01	k: 1595803	n:1600000
KS ci ratio: 1.315100e-01	ci left: 5.184967e-04	ci right 5.920807e-04	k: 887	n:1600000
KCNN2   1600000 perm   1228 sec   (1303 perm/sec)   p_kst 5.543750e-04   p_cons 9.973769e-01   p_joint 5.543750e-04

Joint ci ratio: 1.312149e-01	ci left: 5.176791e-04	ci right 5.909692e-04	k: 891	n:1610000
Cons ci ratio: 1.583746e-04	ci left: 9.972993e-01	ci right 9.974579e-01	k: 1605781	n:1610000
KS ci ratio: 1.312149e-01	ci left: 5.176791e-04	ci right 5.909692e-04	k: 891	n:1610000
KCNN2   1610000 perm   1241 sec   (1297 perm/sec)   p_kst 5.534161e-04   p_cons 9.973795e-01   p_joint 5.534161e-04

Joint ci ratio: 1.306303e-01	ci left: 5.192601e-04	ci right 5.924212e-04	k: 899	n:1620000
Cons ci ratio: 1.579929e-04	ci left: 9.972959e-01	ci right 9.974541e-01	k: 1615749	n:1620000
KS ci ratio: 1.306303e-01	ci left: 5.192601e-04	ci right 5.924212e-04	k: 899	n:1620000
KCNN2   1620000 perm   1255 sec   (1291 perm/sec)   p_kst 5.549383e-04   p_cons 9.973759e-01   p_joint 5.549383e-04

Joint ci ratio: 1.301252e-01	ci left: 5.202289e-04	ci right 5.932211e-04	k: 906	n:1630000
Cons ci ratio: 1.575215e-04	ci left: 9.972957e-01	ci right 9.974534e-01	k: 1625722	n:1630000
KS ci ratio: 1.301252e-01	ci left: 5.202289e-04	ci right 5.932211e-04	k: 906	n:1630000
KCNN2   1630000 perm   1269 sec   (1285 perm/sec)   p_kst 5.558282e-04   p_cons 9.973755e-01   p_joint 5.558282e-04

Joint ci ratio: 1.296969e-01	ci left: 5.205964e-04	ci right 5.933813e-04	k: 912	n:1640000
Cons ci ratio: 1.569078e-04	ci left: 9.973005e-01	ci right 9.974575e-01	k: 1635703	n:1640000
KS ci ratio: 1.296969e-01	ci left: 5.205964e-04	ci right 5.933813e-04	k: 912	n:1640000
KCNN2   1640000 perm   1283 sec   (1279 perm/sec)   p_kst 5.560976e-04   p_cons 9.973799e-01   p_joint 5.560976e-04

Joint ci ratio: 1.291323e-01	ci left: 5.221328e-04	ci right 5.947904e-04	k: 920	n:1650000
Cons ci ratio: 1.563190e-04	ci left: 9.973045e-01	ci right 9.974610e-01	k: 1645683	n:1650000
KS ci ratio: 1.291323e-01	ci left: 5.221328e-04	ci right 5.947904e-04	k: 920	n:1650000
KCNN2   1650000 perm   1296 sec   (1273 perm/sec)   p_kst 5.575758e-04   p_cons 9.973836e-01   p_joint 5.575758e-04

Joint ci ratio: 1.288529e-01	ci left: 5.213193e-04	ci right 5.936947e-04	k: 924	n:1660000
Cons ci ratio: 1.558984e-04	ci left: 9.973030e-01	ci right 9.974591e-01	k: 1655654	n:1660000
KS ci ratio: 1.288529e-01	ci left: 5.213193e-04	ci right 5.936947e-04	k: 924	n:1660000
KCNN2   1660000 perm   1310 sec   (1267 perm/sec)   p_kst 5.566265e-04   p_cons 9.973819e-01   p_joint 5.566265e-04

Joint ci ratio: 1.285060e-01	ci left: 5.210952e-04	ci right 5.932299e-04	k: 929	n:1670000
Cons ci ratio: 1.554276e-04	ci left: 9.973034e-01	ci right 9.974590e-01	k: 1665628	n:1670000
KS ci ratio: 1.285060e-01	ci left: 5.210952e-04	ci right 5.932299e-04	k: 929	n:1670000
KCNN2   1670000 perm   1324 sec   (1262 perm/sec)   p_kst 5.562874e-04   p_cons 9.973820e-01   p_joint 5.562874e-04

Joint ci ratio: 1.278205e-01	ci left: 5.237551e-04	ci right 5.958419e-04	k: 939	n:1680000
Cons ci ratio: 1.548550e-04	ci left: 9.973073e-01	ci right 9.974624e-01	k: 1675608	n:1680000
KS ci ratio: 1.278205e-01	ci left: 5.237551e-04	ci right 5.958419e-04	k: 939	n:1680000
KCNN2   1680000 perm   1338 sec   (1256 perm/sec)   p_kst 5.589286e-04   p_cons 9.973857e-01   p_joint 5.589286e-04

Joint ci ratio: 1.274145e-01	ci left: 5.240929e-04	ci right 5.959798e-04	k: 945	n:1690000
Cons ci ratio: 1.544986e-04	ci left: 9.973041e-01	ci right 9.974587e-01	k: 1685576	n:1690000
KS ci ratio: 1.274145e-01	ci left: 5.240929e-04	ci right 5.959798e-04	k: 945	n:1690000
KCNN2   1690000 perm   1352 sec   (1250 perm/sec)   p_kst 5.591716e-04   p_cons 9.973822e-01   p_joint 5.591716e-04

Joint ci ratio: 1.272801e-01	ci left: 5.221490e-04	ci right 5.936880e-04	k: 947	n:1700000
Cons ci ratio: 1.540577e-04	ci left: 9.973038e-01	ci right 9.974580e-01	k: 1695549	n:1700000
KS ci ratio: 1.272801e-01	ci left: 5.221490e-04	ci right 5.936880e-04	k: 947	n:1700000
KCNN2   1700000 perm   1367 sec   (1243 perm/sec)   p_kst 5.570588e-04   p_cons 9.973818e-01   p_joint 5.570588e-04

Joint ci ratio: 1.268128e-01	ci left: 5.230589e-04	ci right 5.944397e-04	k: 954	n:1710000
Cons ci ratio: 1.535690e-04	ci left: 9.973053e-01	ci right 9.974591e-01	k: 1705525	n:1710000
KS ci ratio: 1.268128e-01	ci left: 5.230589e-04	ci right 5.944397e-04	k: 954	n:1710000
KCNN2   1710000 perm   1382 sec   (1237 perm/sec)   p_kst 5.578947e-04   p_cons 9.973830e-01   p_joint 5.578947e-04

Joint ci ratio: 1.266141e-01	ci left: 5.217068e-04	ci right 5.927831e-04	k: 957	n:1720000
Cons ci ratio: 1.530336e-04	ci left: 9.973086e-01	ci right 9.974618e-01	k: 1715504	n:1720000
KS ci ratio: 1.266141e-01	ci left: 5.217068e-04	ci right 5.927831e-04	k: 957	n:1720000
KCNN2   1720000 perm   1396 sec   (1232 perm/sec)   p_kst 5.563953e-04   p_cons 9.973860e-01   p_joint 5.563953e-04

Joint ci ratio: 1.262195e-01	ci left: 5.220497e-04	ci right 5.929344e-04	k: 963	n:1730000
Cons ci ratio: 1.526559e-04	ci left: 9.973066e-01	ci right 9.974594e-01	k: 1725474	n:1730000
KS ci ratio: 1.262195e-01	ci left: 5.220497e-04	ci right 5.929344e-04	k: 963	n:1730000
KCNN2   1730000 perm   1411 sec   (1226 perm/sec)   p_kst 5.566474e-04   p_cons 9.973838e-01   p_joint 5.566474e-04

Joint ci ratio: 1.258285e-01	ci left: 5.223890e-04	ci right 5.930837e-04	k: 969	n:1740000
Cons ci ratio: 1.522976e-04	ci left: 9.973040e-01	ci right 9.974564e-01	k: 1735443	n:1740000
KS ci ratio: 1.258285e-01	ci left: 5.223890e-04	ci right 5.930837e-04	k: 969	n:1740000
KCNN2   1740000 perm   1426 sec   (1221 perm/sec)   p_kst 5.568966e-04   p_cons 9.973810e-01   p_joint 5.568966e-04

Joint ci ratio: 1.255055e-01	ci left: 5.221712e-04	ci right 5.926416e-04	k: 974	n:1750000
Cons ci ratio: 1.518419e-04	ci left: 9.973049e-01	ci right 9.974569e-01	k: 1745418	n:1750000
KS ci ratio: 1.255055e-01	ci left: 5.221712e-04	ci right 5.926416e-04	k: 974	n:1750000
KCNN2   1750000 perm   1440 sec   (1215 perm/sec)   p_kst 5.565714e-04   p_cons 9.973817e-01   p_joint 5.565714e-04

Joint ci ratio: 1.251210e-01	ci left: 5.225065e-04	ci right 5.927902e-04	k: 980	n:1760000
Cons ci ratio: 1.514398e-04	ci left: 9.973041e-01	ci right 9.974557e-01	k: 1755390	n:1760000
KS ci ratio: 1.251210e-01	ci left: 5.225065e-04	ci right 5.927902e-04	k: 980	n:1760000
KCNN2   1760000 perm   1455 sec   (1210 perm/sec)   p_kst 5.568182e-04   p_cons 9.973807e-01   p_joint 5.568182e-04

Joint ci ratio: 1.248034e-01	ci left: 5.222911e-04	ci right 5.923542e-04	k: 985	n:1770000
Cons ci ratio: 1.509755e-04	ci left: 9.973055e-01	ci right 9.974567e-01	k: 1765366	n:1770000
KS ci ratio: 1.248034e-01	ci left: 5.222911e-04	ci right 5.923542e-04	k: 985	n:1770000
KCNN2   1770000 perm   1470 sec   (1204 perm/sec)   p_kst 5.564972e-04   p_cons 9.973819e-01   p_joint 5.564972e-04

Joint ci ratio: 1.242376e-01	ci left: 5.242556e-04	ci right 5.942399e-04	k: 994	n:1780000
Cons ci ratio: 1.507096e-04	ci left: 9.973002e-01	ci right 9.974510e-01	k: 1775330	n:1780000
KS ci ratio: 1.242376e-01	ci left: 5.242556e-04	ci right 5.942399e-04	k: 994	n:1780000
KCNN2   1780000 perm   1484 sec   (1199 perm/sec)   p_kst 5.584270e-04   p_cons 9.973764e-01   p_joint 5.584270e-04

Joint ci ratio: 1.238028e-01	ci left: 5.251161e-04	ci right 5.949520e-04	k: 1001	n:1790000
Cons ci ratio: 1.503002e-04	ci left: 9.972999e-01	ci right 9.974504e-01	k: 1785303	n:1790000
KS ci ratio: 1.238028e-01	ci left: 5.251161e-04	ci right 5.949520e-04	k: 1001	n:1790000
KCNN2   1790000 perm   1499 sec   (1194 perm/sec)   p_kst 5.592179e-04   p_cons 9.973760e-01   p_joint 5.592179e-04

Joint ci ratio: 1.231895e-01	ci left: 5.275828e-04	ci right 5.973737e-04	k: 1011	n:1800000
Cons ci ratio: 1.498146e-04	ci left: 9.973025e-01	ci right 9.974525e-01	k: 1795281	n:1800000
KS ci ratio: 1.231895e-01	ci left: 5.275828e-04	ci right 5.973737e-04	k: 1011	n:1800000
KCNN2   1800000 perm   1513 sec   (1189 perm/sec)   p_kst 5.616667e-04   p_cons 9.973783e-01   p_joint 5.616667e-04

Joint ci ratio: 1.227656e-01	ci left: 5.284164e-04	ci right 5.980596e-04	k: 1018	n:1810000
Cons ci ratio: 1.493493e-04	ci left: 9.973046e-01	ci right 9.974541e-01	k: 1805258	n:1810000
KS ci ratio: 1.227656e-01	ci left: 5.284164e-04	ci right 5.980596e-04	k: 1018	n:1810000
KCNN2   1810000 perm   1529 sec   (1184 perm/sec)   p_kst 5.624309e-04   p_cons 9.973801e-01   p_joint 5.624309e-04

Joint ci ratio: 1.224655e-01	ci left: 5.281760e-04	ci right 5.976051e-04	k: 1023	n:1820000
Cons ci ratio: 1.489509e-04	ci left: 9.973043e-01	ci right 9.974534e-01	k: 1815231	n:1820000
KS ci ratio: 1.224655e-01	ci left: 5.281760e-04	ci right 5.976051e-04	k: 1023	n:1820000
KCNN2   1820000 perm   1544 sec   (1179 perm/sec)   p_kst 5.620879e-04   p_cons 9.973797e-01   p_joint 5.620879e-04

Joint ci ratio: 1.224059e-01	ci left: 5.258194e-04	ci right 5.949027e-04	k: 1024	n:1830000
Cons ci ratio: 1.486022e-04	ci left: 9.973024e-01	ci right 9.974512e-01	k: 1825201	n:1830000
KS ci ratio: 1.224059e-01	ci left: 5.258194e-04	ci right 5.949027e-04	k: 1024	n:1830000
KCNN2   1830000 perm   1559 sec   (1174 perm/sec)   p_kst 5.595628e-04   p_cons 9.973776e-01   p_joint 5.595628e-04

Joint ci ratio: 1.220492e-01	ci left: 5.261229e-04	ci right 5.950300e-04	k: 1030	n:1840000
Cons ci ratio: 1.481327e-04	ci left: 9.973050e-01	ci right 9.974532e-01	k: 1835179	n:1840000
KS ci ratio: 1.220492e-01	ci left: 5.261229e-04	ci right 5.950300e-04	k: 1030	n:1840000
KCNN2   1840000 perm   1574 sec   (1169 perm/sec)   p_kst 5.597826e-04   p_cons 9.973799e-01   p_joint 5.597826e-04

Joint ci ratio: 1.215198e-01	ci left: 5.279957e-04	ci right 5.968266e-04	k: 1039	n:1850000
Cons ci ratio: 1.477592e-04	ci left: 9.973042e-01	ci right 9.974521e-01	k: 1845151	n:1850000
KS ci ratio: 1.215198e-01	ci left: 5.279957e-04	ci right 5.968266e-04	k: 1039	n:1850000
KCNN2   1850000 perm   1590 sec   (1164 perm/sec)   p_kst 5.616216e-04   p_cons 9.973789e-01   p_joint 5.616216e-04

Joint ci ratio: 1.212869e-01	ci left: 5.272422e-04	ci right 5.958337e-04	k: 1043	n:1860000
Cons ci ratio: 1.473734e-04	ci left: 9.973040e-01	ci right 9.974515e-01	k: 1855124	n:1860000
KS ci ratio: 1.212869e-01	ci left: 5.272422e-04	ci right 5.958337e-04	k: 1043	n:1860000
KCNN2   1860000 perm   1605 sec   (1159 perm/sec)   p_kst 5.607527e-04   p_cons 9.973785e-01   p_joint 5.607527e-04

Joint ci ratio: 1.208822e-01	ci left: 5.280527e-04	ci right 5.965041e-04	k: 1050	n:1870000
Cons ci ratio: 1.471257e-04	ci left: 9.972989e-01	ci right 9.974461e-01	k: 1865088	n:1870000
KS ci ratio: 1.208822e-01	ci left: 5.280527e-04	ci right 5.965041e-04	k: 1050	n:1870000
KCNN2   1870000 perm   1621 sec   (1154 perm/sec)   p_kst 5.614973e-04   p_cons 9.973733e-01   p_joint 5.614973e-04

Joint ci ratio: 1.204816e-01	ci left: 5.288549e-04	ci right 5.971669e-04	k: 1057	n:1880000
Cons ci ratio: 1.467000e-04	ci left: 9.973003e-01	ci right 9.974471e-01	k: 1875064	n:1880000
KS ci ratio: 1.204816e-01	ci left: 5.288549e-04	ci right 5.971669e-04	k: 1057	n:1880000
KCNN2   1880000 perm   1636 sec   (1149 perm/sec)   p_kst 5.622340e-04   p_cons 9.973745e-01   p_joint 5.622340e-04

Joint ci ratio: 1.201980e-01	ci left: 5.286226e-04	ci right 5.967324e-04	k: 1062	n:1890000
Cons ci ratio: 1.462780e-04	ci left: 9.973017e-01	ci right 9.974481e-01	k: 1885040	n:1890000
KS ci ratio: 1.201980e-01	ci left: 5.286226e-04	ci right 5.967324e-04	k: 1062	n:1890000
KCNN2   1890000 perm   1651 sec   (1145 perm/sec)   p_kst 5.619048e-04   p_cons 9.973757e-01   p_joint 5.619048e-04

Joint ci ratio: 1.198041e-01	ci left: 5.294140e-04	ci right 5.973864e-04	k: 1069	n:1900000
Cons ci ratio: 1.459769e-04	ci left: 9.972988e-01	ci right 9.974449e-01	k: 1895008	n:1900000
KS ci ratio: 1.198041e-01	ci left: 5.294140e-04	ci right 5.973864e-04	k: 1069	n:1900000
KCNN2   1900000 perm   1666 sec   (1140 perm/sec)   p_kst 5.626316e-04   p_cons 9.973726e-01   p_joint 5.626316e-04

Joint ci ratio: 1.194696e-01	ci left: 5.296896e-04	ci right 5.974941e-04	k: 1075	n:1910000
Cons ci ratio: 1.455902e-04	ci left: 9.972992e-01	ci right 9.974449e-01	k: 1904982	n:1910000
KS ci ratio: 1.194696e-01	ci left: 5.296896e-04	ci right 5.974941e-04	k: 1075	n:1910000
KCNN2   1910000 perm   1682 sec   (1136 perm/sec)   p_kst 5.628272e-04   p_cons 9.973728e-01   p_joint 5.628272e-04

Joint ci ratio: 1.193035e-01	ci left: 5.284466e-04	ci right 5.959913e-04	k: 1078	n:1920000
Cons ci ratio: 1.452210e-04	ci left: 9.972990e-01	ci right 9.974443e-01	k: 1914955	n:1920000
KS ci ratio: 1.193035e-01	ci left: 5.284466e-04	ci right 5.959913e-04	k: 1078	n:1920000
KCNN2   1920000 perm   1697 sec   (1131 perm/sec)   p_kst 5.614583e-04   p_cons 9.973724e-01   p_joint 5.614583e-04

Joint ci ratio: 1.191932e-01	ci left: 5.267139e-04	ci right 5.939704e-04	k: 1080	n:1930000
Cons ci ratio: 1.448546e-04	ci left: 9.972988e-01	ci right 9.974438e-01	k: 1924928	n:1930000
KS ci ratio: 1.191932e-01	ci left: 5.267139e-04	ci right 5.939704e-04	k: 1080	n:1930000
KCNN2   1930000 perm   1713 sec   (1127 perm/sec)   p_kst 5.595855e-04   p_cons 9.973720e-01   p_joint 5.595855e-04

Joint ci ratio: 1.190282e-01	ci left: 5.254992e-04	ci right 5.925012e-04	k: 1083	n:1940000
Cons ci ratio: 1.444767e-04	ci left: 9.972991e-01	ci right 9.974437e-01	k: 1934902	n:1940000
KS ci ratio: 1.190282e-01	ci left: 5.254992e-04	ci right 5.925012e-04	k: 1083	n:1940000
KCNN2   1940000 perm   1729 sec   (1122 perm/sec)   p_kst 5.582474e-04   p_cons 9.973722e-01   p_joint 5.582474e-04

Joint ci ratio: 1.187547e-01	ci left: 5.252921e-04	ci right 5.921031e-04	k: 1088	n:1950000
Cons ci ratio: 1.439748e-04	ci left: 9.973041e-01	ci right 9.974482e-01	k: 1944885	n:1950000
KS ci ratio: 1.187547e-01	ci left: 5.252921e-04	ci right 5.921031e-04	k: 1088	n:1950000
KCNN2   1950000 perm   1744 sec   (1118 perm/sec)   p_kst 5.579487e-04   p_cons 9.973769e-01   p_joint 5.579487e-04

Joint ci ratio: 1.186459e-01	ci left: 5.236022e-04	ci right 5.901328e-04	k: 1090	n:1960000
Cons ci ratio: 1.436458e-04	ci left: 9.973029e-01	ci right 9.974467e-01	k: 1954856	n:1960000
KS ci ratio: 1.186459e-01	ci left: 5.236022e-04	ci right 5.901328e-04	k: 1090	n:1960000
KCNN2   1960000 perm   1760 sec   (1113 perm/sec)   p_kst 5.561224e-04   p_cons 9.973755e-01   p_joint 5.561224e-04

Joint ci ratio: 1.184290e-01	ci left: 5.229145e-04	ci right 5.892279e-04	k: 1094	n:1970000
Cons ci ratio: 1.432217e-04	ci left: 9.973053e-01	ci right 9.974486e-01	k: 1964834	n:1970000
KS ci ratio: 1.184290e-01	ci left: 5.229145e-04	ci right 5.892279e-04	k: 1094	n:1970000
KCNN2   1970000 perm   1777 sec   (1109 perm/sec)   p_kst 5.553299e-04   p_cons 9.973777e-01   p_joint 5.553299e-04

Joint ci ratio: 1.181059e-01	ci left: 5.232142e-04	ci right 5.893719e-04	k: 1100	n:1980000
Cons ci ratio: 1.428840e-04	ci left: 9.973045e-01	ci right 9.974475e-01	k: 1974806	n:1980000
KS ci ratio: 1.181059e-01	ci left: 5.232142e-04	ci right 5.893719e-04	k: 1100	n:1980000
KCNN2   1980000 perm   1793 sec   (1104 perm/sec)   p_kst 5.555556e-04   p_cons 9.973768e-01   p_joint 5.555556e-04

Joint ci ratio: 1.178920e-01	ci left: 5.225357e-04	ci right 5.884796e-04	k: 1104	n:1990000
Cons ci ratio: 1.425213e-04	ci left: 9.973048e-01	ci right 9.974475e-01	k: 1984780	n:1990000
KS ci ratio: 1.178920e-01	ci left: 5.225357e-04	ci right 5.884796e-04	k: 1104	n:1990000
KCNN2   1990000 perm   1809 sec   (1100 perm/sec)   p_kst 5.547739e-04   p_cons 9.973769e-01   p_joint 5.547739e-04

Joint ci ratio: 1.176792e-01	ci left: 5.218641e-04	ci right 5.875961e-04	k: 1108	n:2000000
Cons ci ratio: 1.421885e-04	ci left: 9.973041e-01	ci right 9.974464e-01	k: 1994752	n:2000000
KS ci ratio: 1.176792e-01	ci left: 5.218641e-04	ci right 5.875961e-04	k: 1108	n:2000000
KCNN2   2000000 perm   1826 sec   (1095 perm/sec)   p_kst 5.540000e-04   p_cons 9.973760e-01   p_joint 5.540000e-04

Joint ci ratio: 1.173095e-01	ci left: 5.226480e-04	ci right 5.882576e-04	k: 1115	n:2010000
Cons ci ratio: 1.418445e-04	ci left: 9.973039e-01	ci right 9.974459e-01	k: 2004725	n:2010000
KS ci ratio: 1.173095e-01	ci left: 5.226480e-04	ci right 5.882576e-04	k: 1115	n:2010000
KCNN2   2010000 perm   1842 sec   (1091 perm/sec)   p_kst 5.547264e-04   p_cons 9.973756e-01   p_joint 5.547264e-04

Joint ci ratio: 1.169954e-01	ci left: 5.229439e-04	ci right 5.884027e-04	k: 1121	n:2020000
Cons ci ratio: 1.414763e-04	ci left: 9.973047e-01	ci right 9.974463e-01	k: 2014700	n:2020000
KS ci ratio: 1.169954e-01	ci left: 5.229439e-04	ci right 5.884027e-04	k: 1121	n:2020000
KCNN2   2020000 perm   1859 sec   (1087 perm/sec)   p_kst 5.549505e-04   p_cons 9.973762e-01   p_joint 5.549505e-04

Joint ci ratio: 1.165805e-01	ci left: 5.241936e-04	ci right 5.895601e-04	k: 1129	n:2030000
Cons ci ratio: 1.411109e-04	ci left: 9.973055e-01	ci right 9.974467e-01	k: 2024675	n:2030000
KS ci ratio: 1.165805e-01	ci left: 5.241936e-04	ci right 5.895601e-04	k: 1129	n:2030000
KCNN2   2030000 perm   1876 sec   (1082 perm/sec)   p_kst 5.561576e-04   p_cons 9.973768e-01   p_joint 5.561576e-04

Joint ci ratio: 1.161189e-01	ci left: 5.259074e-04	ci right 5.912102e-04	k: 1138	n:2040000
Cons ci ratio: 1.407483e-04	ci left: 9.973063e-01	ci right 9.974472e-01	k: 2034650	n:2040000
KS ci ratio: 1.161189e-01	ci left: 5.259074e-04	ci right 5.912102e-04	k: 1138	n:2040000
KCNN2   2040000 perm   1893 sec   (1078 perm/sec)   p_kst 5.578431e-04   p_cons 9.973775e-01   p_joint 5.578431e-04

Joint ci ratio: 1.155620e-01	ci left: 5.285524e-04	ci right 5.938475e-04	k: 1149	n:2050000
Cons ci ratio: 1.404016e-04	ci left: 9.973066e-01	ci right 9.974471e-01	k: 2044624	n:2050000
KS ci ratio: 1.155620e-01	ci left: 5.285524e-04	ci right 5.938475e-04	k: 1149	n:2050000
KCNN2   2050000 perm   1909 sec   (1074 perm/sec)   p_kst 5.604878e-04   p_cons 9.973776e-01   p_joint 5.604878e-04

Joint ci ratio: 1.152119e-01	ci left: 5.292866e-04	ci right 5.944608e-04	k: 1156	n:2060000
Cons ci ratio: 1.400834e-04	ci left: 9.973059e-01	ci right 9.974461e-01	k: 2054596	n:2060000
KS ci ratio: 1.152119e-01	ci left: 5.292866e-04	ci right 5.944608e-04	k: 1156	n:2060000
KCNN2   2060000 perm   1926 sec   (1070 perm/sec)   p_kst 5.611650e-04   p_cons 9.973767e-01   p_joint 5.611650e-04

Joint ci ratio: 1.149638e-01	ci left: 5.290756e-04	ci right 5.940740e-04	k: 1161	n:2070000
Cons ci ratio: 1.396254e-04	ci left: 9.973106e-01	ci right 9.974503e-01	k: 2064579	n:2070000
KS ci ratio: 1.149638e-01	ci left: 5.290756e-04	ci right 5.940740e-04	k: 1161	n:2070000
KCNN2   2070000 perm   1943 sec   (1066 perm/sec)   p_kst 5.608696e-04   p_cons 9.973812e-01   p_joint 5.608696e-04

Joint ci ratio: 1.147172e-01	ci left: 5.288668e-04	ci right 5.936907e-04	k: 1166	n:2080000
Cons ci ratio: 1.392484e-04	ci left: 9.973123e-01	ci right 9.974517e-01	k: 2074556	n:2080000
KS ci ratio: 1.147172e-01	ci left: 5.288668e-04	ci right 5.936907e-04	k: 1166	n:2080000
KCNN2   2080000 perm   1959 sec   (1062 perm/sec)   p_kst 5.605769e-04   p_cons 9.973827e-01   p_joint 5.605769e-04

Joint ci ratio: 1.145701e-01	ci left: 5.277306e-04	ci right 5.923267e-04	k: 1169	n:2090000
Cons ci ratio: 1.389254e-04	ci left: 9.973121e-01	ci right 9.974511e-01	k: 2084529	n:2090000
KS ci ratio: 1.145701e-01	ci left: 5.277306e-04	ci right 5.923267e-04	k: 1169	n:2090000
KCNN2   2090000 perm   1976 sec   (1058 perm/sec)   p_kst 5.593301e-04   p_cons 9.973823e-01   p_joint 5.593301e-04

Joint ci ratio: 1.143748e-01	ci left: 5.270678e-04	ci right 5.914653e-04	k: 1173	n:2100000
Cons ci ratio: 1.385161e-04	ci left: 9.973152e-01	ci right 9.974539e-01	k: 2094509	n:2100000
KS ci ratio: 1.143748e-01	ci left: 5.270678e-04	ci right 5.914653e-04	k: 1173	n:2100000
KCNN2   2100000 perm   1993 sec   (1054 perm/sec)   p_kst 5.585714e-04   p_cons 9.973852e-01   p_joint 5.585714e-04

Joint ci ratio: 1.139871e-01	ci left: 5.282530e-04	ci right 5.925619e-04	k: 1181	n:2110000
Cons ci ratio: 1.380851e-04	ci left: 9.973193e-01	ci right 9.974575e-01	k: 2104491	n:2110000
KS ci ratio: 1.139871e-01	ci left: 5.282530e-04	ci right 5.925619e-04	k: 1181	n:2110000
KCNN2   2110000 perm   2010 sec   (1050 perm/sec)   p_kst 5.597156e-04   p_cons 9.973891e-01   p_joint 5.597156e-04

Joint ci ratio: 1.137947e-01	ci left: 5.275943e-04	ci right 5.917073e-04	k: 1185	n:2120000
Cons ci ratio: 1.377326e-04	ci left: 9.973205e-01	ci right 9.974583e-01	k: 2114467	n:2120000
KS ci ratio: 1.137947e-01	ci left: 5.275943e-04	ci right 5.917073e-04	k: 1185	n:2120000
KCNN2   2120000 perm   2026 sec   (1046 perm/sec)   p_kst 5.589623e-04   p_cons 9.973901e-01   p_joint 5.589623e-04

Joint ci ratio: 1.136033e-01	ci left: 5.269418e-04	ci right 5.908607e-04	k: 1189	n:2130000
Cons ci ratio: 1.374077e-04	ci left: 9.973207e-01	ci right 9.974582e-01	k: 2124441	n:2130000
KS ci ratio: 1.136033e-01	ci left: 5.269418e-04	ci right 5.908607e-04	k: 1189	n:2130000
KCNN2   2130000 perm   2043 sec   (1042 perm/sec)   p_kst 5.582160e-04   p_cons 9.973901e-01   p_joint 5.582160e-04

Joint ci ratio: 1.135081e-01	ci left: 5.253875e-04	ci right 5.890608e-04	k: 1191	n:2140000
Cons ci ratio: 1.369619e-04	ci left: 9.973257e-01	ci right 9.974627e-01	k: 2134425	n:2140000
KS ci ratio: 1.135081e-01	ci left: 5.253875e-04	ci right 5.890608e-04	k: 1191	n:2140000
KCNN2   2140000 perm   2061 sec   (1039 perm/sec)   p_kst 5.565421e-04   p_cons 9.973949e-01   p_joint 5.565421e-04

Joint ci ratio: 1.134131e-01	ci left: 5.238477e-04	ci right 5.872776e-04	k: 1193	n:2150000
Cons ci ratio: 1.366178e-04	ci left: 9.973268e-01	ci right 9.974635e-01	k: 2144401	n:2150000
KS ci ratio: 1.134131e-01	ci left: 5.238477e-04	ci right 5.872776e-04	k: 1193	n:2150000
KCNN2   2150000 perm   2078 sec   (1035 perm/sec)   p_kst 5.548837e-04   p_cons 9.973958e-01   p_joint 5.548837e-04

Joint ci ratio: 1.130350e-01	ci left: 5.250213e-04	ci right 5.883673e-04	k: 1201	n:2160000
Cons ci ratio: 1.363857e-04	ci left: 9.973237e-01	ci right 9.974602e-01	k: 2154368	n:2160000
KS ci ratio: 1.130350e-01	ci left: 5.250213e-04	ci right 5.883673e-04	k: 1201	n:2160000
KCNN2   2160000 perm   2095 sec   (1031 perm/sec)   p_kst 5.560185e-04   p_cons 9.973926e-01   p_joint 5.560185e-04

Joint ci ratio: 1.128474e-01	ci left: 5.243931e-04	ci right 5.875513e-04	k: 1205	n:2170000
Cons ci ratio: 1.360822e-04	ci left: 9.973234e-01	ci right 9.974596e-01	k: 2164341	n:2170000
KS ci ratio: 1.128474e-01	ci left: 5.243931e-04	ci right 5.875513e-04	k: 1205	n:2170000
KCNN2   2170000 perm   2113 sec   (1027 perm/sec)   p_kst 5.552995e-04   p_cons 9.973922e-01   p_joint 5.552995e-04

Joint ci ratio: 1.124749e-01	ci left: 5.255539e-04	ci right 5.886291e-04	k: 1213	n:2180000
Cons ci ratio: 1.357567e-04	ci left: 9.973241e-01	ci right 9.974599e-01	k: 2174316	n:2180000
KS ci ratio: 1.124749e-01	ci left: 5.255539e-04	ci right 5.886291e-04	k: 1213	n:2180000
KCNN2   2180000 perm   2130 sec   (1023 perm/sec)   p_kst 5.564220e-04   p_cons 9.973927e-01   p_joint 5.564220e-04

Joint ci ratio: 1.121980e-01	ci left: 5.258169e-04	ci right 5.887580e-04	k: 1219	n:2190000
Cons ci ratio: 1.354455e-04	ci left: 9.973243e-01	ci right 9.974598e-01	k: 2184290	n:2190000
KS ci ratio: 1.121980e-01	ci left: 5.258169e-04	ci right 5.887580e-04	k: 1219	n:2190000
KCNN2   2190000 perm   2148 sec   (1020 perm/sec)   p_kst 5.566210e-04   p_cons 9.973927e-01   p_joint 5.566210e-04

Joint ci ratio: 1.121062e-01	ci left: 5.243104e-04	ci right 5.870164e-04	k: 1221	n:2200000
Cons ci ratio: 1.350537e-04	ci left: 9.973277e-01	ci right 9.974628e-01	k: 2194271	n:2200000
KS ci ratio: 1.121062e-01	ci left: 5.243104e-04	ci right 5.870164e-04	k: 1221	n:2200000
KCNN2   2200000 perm   2166 sec   (1016 perm/sec)   p_kst 5.550000e-04   p_cons 9.973959e-01   p_joint 5.550000e-04

Joint ci ratio: 1.116502e-01	ci left: 5.263362e-04	ci right 5.890117e-04	k: 1231	n:2210000
Cons ci ratio: 1.348059e-04	ci left: 9.973256e-01	ci right 9.974605e-01	k: 2204240	n:2210000
KS ci ratio: 1.116502e-01	ci left: 5.263362e-04	ci right 5.890117e-04	k: 1231	n:2210000
KCNN2   2210000 perm   2183 sec   (1012 perm/sec)   p_kst 5.570136e-04   p_cons 9.973937e-01   p_joint 5.570136e-04

Joint ci ratio: 1.114243e-01	ci left: 5.261548e-04	ci right 5.886735e-04	k: 1236	n:2220000
Cons ci ratio: 1.344662e-04	ci left: 9.973271e-01	ci right 9.974617e-01	k: 2214217	n:2220000
KS ci ratio: 1.114243e-01	ci left: 5.261548e-04	ci right 5.886735e-04	k: 1236	n:2220000
KCNN2   2220000 perm   2201 sec   (1008 perm/sec)   p_kst 5.567568e-04   p_cons 9.973950e-01   p_joint 5.567568e-04

Joint ci ratio: 1.111998e-01	ci left: 5.259750e-04	ci right 5.883383e-04	k: 1241	n:2230000
Cons ci ratio: 1.341522e-04	ci left: 9.973277e-01	ci right 9.974620e-01	k: 2224192	n:2230000
KS ci ratio: 1.111998e-01	ci left: 5.259750e-04	ci right 5.883383e-04	k: 1241	n:2230000
KCNN2   2230000 perm   2219 sec   (1005 perm/sec)   p_kst 5.565022e-04   p_cons 9.973955e-01   p_joint 5.565022e-04

Joint ci ratio: 1.110213e-01	ci left: 5.253630e-04	ci right 5.875471e-04	k: 1245	n:2240000
Cons ci ratio: 1.339093e-04	ci left: 9.973257e-01	ci right 9.974597e-01	k: 2234161	n:2240000
KS ci ratio: 1.110213e-01	ci left: 5.253630e-04	ci right 5.875471e-04	k: 1245	n:2240000
KCNN2   2240000 perm   2237 sec   (1001 perm/sec)   p_kst 5.558036e-04   p_cons 9.973933e-01   p_joint 5.558036e-04

Joint ci ratio: 1.106665e-01	ci left: 5.264851e-04	ci right 5.885899e-04	k: 1253	n:2250000
Cons ci ratio: 1.336791e-04	ci left: 9.973231e-01	ci right 9.974569e-01	k: 2244129	n:2250000
KS ci ratio: 1.106665e-01	ci left: 5.264851e-04	ci right 5.885899e-04	k: 1253	n:2250000
KCNN2   2250000 perm   2255 sec   (998 perm/sec)   p_kst 5.568889e-04   p_cons 9.973907e-01   p_joint 5.568889e-04

Joint ci ratio: 1.104465e-01	ci left: 5.263067e-04	ci right 5.882590e-04	k: 1258	n:2260000
Cons ci ratio: 1.333252e-04	ci left: 9.973256e-01	ci right 9.974590e-01	k: 2254108	n:2260000
KS ci ratio: 1.104465e-01	ci left: 5.263067e-04	ci right 5.882590e-04	k: 1258	n:2260000
KCNN2   2260000 perm   2273 sec   (994 perm/sec)   p_kst 5.566372e-04   p_cons 9.973929e-01   p_joint 5.566372e-04

Joint ci ratio: 1.103152e-01	ci left: 5.252733e-04	ci right 5.870257e-04	k: 1261	n:2270000
Cons ci ratio: 1.330417e-04	ci left: 9.973253e-01	ci right 9.974584e-01	k: 2264081	n:2270000
KS ci ratio: 1.103152e-01	ci left: 5.252733e-04	ci right 5.870257e-04	k: 1261	n:2270000
KCNN2   2270000 perm   2293 sec   (990 perm/sec)   p_kst 5.555066e-04   p_cons 9.973925e-01   p_joint 5.555066e-04

Joint ci ratio: 1.102280e-01	ci left: 5.238224e-04	ci right 5.853524e-04	k: 1263	n:2280000
Cons ci ratio: 1.327487e-04	ci left: 9.973255e-01	ci right 9.974583e-01	k: 2274055	n:2280000
KS ci ratio: 1.102280e-01	ci left: 5.238224e-04	ci right 5.853524e-04	k: 1263	n:2280000
KCNN2   2280000 perm   2311 sec   (986 perm/sec)   p_kst 5.539474e-04   p_cons 9.973925e-01   p_joint 5.539474e-04

Joint ci ratio: 1.098808e-01	ci left: 5.249323e-04	ci right 5.863858e-04	k: 1271	n:2290000
Cons ci ratio: 1.324799e-04	ci left: 9.973248e-01	ci right 9.974574e-01	k: 2284027	n:2290000
KS ci ratio: 1.098808e-01	ci left: 5.249323e-04	ci right 5.863858e-04	k: 1271	n:2290000
KCNN2   2290000 perm   2330 sec   (983 perm/sec)   p_kst 5.550218e-04   p_cons 9.973917e-01   p_joint 5.550218e-04

Joint ci ratio: 1.097515e-01	ci left: 5.239185e-04	ci right 5.851765e-04	k: 1274	n:2300000
Cons ci ratio: 1.321133e-04	ci left: 9.973281e-01	ci right 9.974603e-01	k: 2294008	n:2300000
KS ci ratio: 1.097515e-01	ci left: 5.239185e-04	ci right 5.851765e-04	k: 1274	n:2300000
KCNN2   2300000 perm   2348 sec   (979 perm/sec)   p_kst 5.539130e-04   p_cons 9.973948e-01   p_joint 5.539130e-04

Joint ci ratio: 1.096227e-01	ci left: 5.229135e-04	ci right 5.839776e-04	k: 1277	n:2310000
Cons ci ratio: 1.318264e-04	ci left: 9.973282e-01	ci right 9.974601e-01	k: 2303982	n:2310000
KS ci ratio: 1.096227e-01	ci left: 5.229135e-04	ci right 5.839776e-04	k: 1277	n:2310000
KCNN2   2310000 perm   2367 sec   (976 perm/sec)   p_kst 5.528139e-04   p_cons 9.973948e-01   p_joint 5.528139e-04

Joint ci ratio: 1.093662e-01	ci left: 5.231749e-04	ci right 5.841175e-04	k: 1283	n:2320000
Cons ci ratio: 1.316286e-04	ci left: 9.973249e-01	ci right 9.974566e-01	k: 2313948	n:2320000
KS ci ratio: 1.093662e-01	ci left: 5.231749e-04	ci right 5.841175e-04	k: 1283	n:2320000
KCNN2   2320000 perm   2385 sec   (973 perm/sec)   p_kst 5.530172e-04   p_cons 9.973914e-01   p_joint 5.530172e-04

Joint ci ratio: 1.092388e-01	ci left: 5.221819e-04	ci right 5.829333e-04	k: 1286	n:2330000
Cons ci ratio: 1.313990e-04	ci left: 9.973229e-01	ci right 9.974544e-01	k: 2323917	n:2330000
KS ci ratio: 1.092388e-01	ci left: 5.221819e-04	ci right 5.829333e-04	k: 1286	n:2330000
KCNN2   2330000 perm   2404 sec   (969 perm/sec)   p_kst 5.519313e-04   p_cons 9.973893e-01   p_joint 5.519313e-04

Joint ci ratio: 1.090694e-01	ci left: 5.216131e-04	ci right 5.821982e-04	k: 1290	n:2340000
Cons ci ratio: 1.311490e-04	ci left: 9.973218e-01	ci right 9.974530e-01	k: 2333888	n:2340000
KS ci ratio: 1.090694e-01	ci left: 5.216131e-04	ci right 5.821982e-04	k: 1290	n:2340000
KCNN2   2340000 perm   2423 sec   (966 perm/sec)   p_kst 5.512821e-04   p_cons 9.973880e-01   p_joint 5.512821e-04

Joint ci ratio: 1.088588e-01	ci left: 5.214631e-04	ci right 5.819064e-04	k: 1295	n:2350000
Cons ci ratio: 1.309645e-04	ci left: 9.973181e-01	ci right 9.974492e-01	k: 2343853	n:2350000
KS ci ratio: 1.088588e-01	ci left: 5.214631e-04	ci right 5.819064e-04	k: 1295	n:2350000
KCNN2   2350000 perm   2442 sec   (962 perm/sec)   p_kst 5.510638e-04   p_cons 9.973843e-01   p_joint 5.510638e-04

Joint ci ratio: 1.085243e-01	ci left: 5.225512e-04	ci right 5.829226e-04	k: 1303	n:2360000
Cons ci ratio: 1.307168e-04	ci left: 9.973170e-01	ci right 9.974478e-01	k: 2353824	n:2360000
KS ci ratio: 1.085243e-01	ci left: 5.225512e-04	ci right 5.829226e-04	k: 1303	n:2360000
KCNN2   2360000 perm   2461 sec   (959 perm/sec)   p_kst 5.521186e-04   p_cons 9.973831e-01   p_joint 5.521186e-04

Joint ci ratio: 1.083169e-01	ci left: 5.223988e-04	ci right 5.826299e-04	k: 1308	n:2370000
Cons ci ratio: 1.304916e-04	ci left: 9.973151e-01	ci right 9.974457e-01	k: 2363793	n:2370000
KS ci ratio: 1.083169e-01	ci left: 5.223988e-04	ci right 5.826299e-04	k: 1308	n:2370000
KCNN2   2370000 perm   2480 sec   (956 perm/sec)   p_kst 5.518987e-04   p_cons 9.973810e-01   p_joint 5.518987e-04

Joint ci ratio: 1.081106e-01	ci left: 5.222479e-04	ci right 5.823395e-04	k: 1313	n:2380000
Cons ci ratio: 1.303198e-04	ci left: 9.973111e-01	ci right 9.974415e-01	k: 2373757	n:2380000
KS ci ratio: 1.081106e-01	ci left: 5.222479e-04	ci right 5.823395e-04	k: 1313	n:2380000
KCNN2   2380000 perm   2499 sec   (952 perm/sec)   p_kst 5.516807e-04   p_cons 9.973769e-01   p_joint 5.516807e-04

Joint ci ratio: 1.079465e-01	ci left: 5.216911e-04	ci right 5.816218e-04	k: 1317	n:2390000
Cons ci ratio: 1.300341e-04	ci left: 9.973117e-01	ci right 9.974419e-01	k: 2383732	n:2390000
KS ci ratio: 1.079465e-01	ci left: 5.216911e-04	ci right 5.816218e-04	k: 1317	n:2390000
KCNN2   2390000 perm   2518 sec   (949 perm/sec)   p_kst 5.510460e-04   p_cons 9.973774e-01   p_joint 5.510460e-04

Joint ci ratio: 1.076609e-01	ci left: 5.223555e-04	ci right 5.821937e-04	k: 1324	n:2400000
Cons ci ratio: 1.297502e-04	ci left: 9.973124e-01	ci right 9.974422e-01	k: 2393707	n:2400000
KS ci ratio: 1.076609e-01	ci left: 5.223555e-04	ci right 5.821937e-04	k: 1324	n:2400000
KCNN2   2400000 perm   2538 sec   (946 perm/sec)   p_kst 5.516667e-04   p_cons 9.973779e-01   p_joint 5.516667e-04

Joint ci ratio: 1.073776e-01	ci left: 5.230145e-04	ci right 5.827606e-04	k: 1331	n:2410000
Cons ci ratio: 1.294887e-04	ci left: 9.973122e-01	ci right 9.974418e-01	k: 2403680	n:2410000
KS ci ratio: 1.073776e-01	ci left: 5.230145e-04	ci right 5.827606e-04	k: 1331	n:2410000
KCNN2   2410000 perm   2557 sec   (942 perm/sec)   p_kst 5.522822e-04   p_cons 9.973776e-01   p_joint 5.522822e-04

Joint ci ratio: 1.070566e-01	ci left: 5.240704e-04	ci right 5.837468e-04	k: 1339	n:2420000
Cons ci ratio: 1.291879e-04	ci left: 9.973137e-01	ci right 9.974430e-01	k: 2413657	n:2420000
KS ci ratio: 1.070566e-01	ci left: 5.240704e-04	ci right 5.837468e-04	k: 1339	n:2420000
KCNN2   2420000 perm   2576 sec   (939 perm/sec)   p_kst 5.533058e-04   p_cons 9.973789e-01   p_joint 5.533058e-04

Joint ci ratio: 1.069768e-01	ci left: 5.227147e-04	ci right 5.821897e-04	k: 1341	n:2430000
Cons ci ratio: 1.289906e-04	ci left: 9.973110e-01	ci right 9.974401e-01	k: 2423624	n:2430000
KS ci ratio: 1.069768e-01	ci left: 5.227147e-04	ci right 5.821897e-04	k: 1341	n:2430000
KCNN2   2430000 perm   2596 sec   (936 perm/sec)   p_kst 5.518519e-04   p_cons 9.973761e-01   p_joint 5.518519e-04

Joint ci ratio: 1.067385e-01	ci left: 5.229658e-04	ci right 5.823284e-04	k: 1347	n:2440000
Cons ci ratio: 1.287740e-04	ci left: 9.973092e-01	ci right 9.974380e-01	k: 2433593	n:2440000
KS ci ratio: 1.067385e-01	ci left: 5.229658e-04	ci right 5.823284e-04	k: 1347	n:2440000
KCNN2   2440000 perm   2615 sec   (933 perm/sec)   p_kst 5.520492e-04   p_cons 9.973742e-01   p_joint 5.520492e-04

Joint ci ratio: 1.066200e-01	ci left: 5.220230e-04	ci right 5.812087e-04	k: 1350	n:2450000
Cons ci ratio: 1.285083e-04	ci left: 9.973094e-01	ci right 9.974380e-01	k: 2443567	n:2450000
KS ci ratio: 1.066200e-01	ci left: 5.220230e-04	ci right 5.812087e-04	k: 1350	n:2450000
KCNN2   2450000 perm   2635 sec   (930 perm/sec)   p_kst 5.510204e-04   p_cons 9.973743e-01   p_joint 5.510204e-04

Joint ci ratio: 1.064625e-01	ci left: 5.214837e-04	ci right 5.805154e-04	k: 1354	n:2460000
Cons ci ratio: 1.283039e-04	ci left: 9.973072e-01	ci right 9.974355e-01	k: 2453535	n:2460000
KS ci ratio: 1.064625e-01	ci left: 5.214837e-04	ci right 5.805154e-04	k: 1354	n:2460000
KCNN2   2460000 perm   2655 sec   (927 perm/sec)   p_kst 5.504065e-04   p_cons 9.973720e-01   p_joint 5.504065e-04

Joint ci ratio: 1.062276e-01	ci left: 5.217369e-04	ci right 5.806588e-04	k: 1360	n:2470000
Cons ci ratio: 1.280312e-04	ci left: 9.973078e-01	ci right 9.974359e-01	k: 2463510	n:2470000
KS ci ratio: 1.062276e-01	ci left: 5.217369e-04	ci right 5.806588e-04	k: 1360	n:2470000
KCNN2   2470000 perm   2674 sec   (924 perm/sec)   p_kst 5.506073e-04   p_cons 9.973725e-01   p_joint 5.506073e-04

Joint ci ratio: 1.059942e-01	ci left: 5.219883e-04	ci right 5.808010e-04	k: 1366	n:2480000
Cons ci ratio: 1.278094e-04	ci left: 9.973065e-01	ci right 9.974343e-01	k: 2473480	n:2480000
KS ci ratio: 1.059942e-01	ci left: 5.219883e-04	ci right 5.808010e-04	k: 1366	n:2480000
KCNN2   2480000 perm   2694 sec   (920 perm/sec)   p_kst 5.508065e-04   p_cons 9.973710e-01   p_joint 5.508065e-04

Joint ci ratio: 1.057238e-01	ci left: 5.226288e-04	ci right 5.813541e-04	k: 1373	n:2490000
Cons ci ratio: 1.275594e-04	ci left: 9.973063e-01	ci right 9.974339e-01	k: 2483453	n:2490000
KS ci ratio: 1.057238e-01	ci left: 5.226288e-04	ci right 5.813541e-04	k: 1373	n:2490000
KCNN2   2490000 perm   2714 sec   (918 perm/sec)   p_kst 5.514056e-04   p_cons 9.973707e-01   p_joint 5.514056e-04

Joint ci ratio: 1.054555e-01	ci left: 5.232643e-04	ci right 5.819026e-04	k: 1380	n:2500000
Cons ci ratio: 1.273108e-04	ci left: 9.973061e-01	ci right 9.974335e-01	k: 2493426	n:2500000
KS ci ratio: 1.054555e-01	ci left: 5.232643e-04	ci right 5.819026e-04	k: 1380	n:2500000
KCNN2   2500000 perm   2734 sec   (915 perm/sec)   p_kst 5.520000e-04   p_cons 9.973704e-01   p_joint 5.520000e-04

Joint ci ratio: 1.052271e-01	ci left: 5.235071e-04	ci right 5.820377e-04	k: 1386	n:2510000
Cons ci ratio: 1.270444e-04	ci left: 9.973068e-01	ci right 9.974339e-01	k: 2503401	n:2510000
KS ci ratio: 1.052271e-01	ci left: 5.235071e-04	ci right 5.820377e-04	k: 1386	n:2510000
KCNN2   2510000 perm   2753 sec   (912 perm/sec)   p_kst 5.521912e-04   p_cons 9.973709e-01   p_joint 5.521912e-04

Joint ci ratio: 1.048873e-01	ci left: 5.249073e-04	ci right 5.833932e-04	k: 1395	n:2520000
Cons ci ratio: 1.268181e-04	ci left: 9.973058e-01	ci right 9.974327e-01	k: 2513372	n:2520000
KS ci ratio: 1.048873e-01	ci left: 5.249073e-04	ci right 5.833932e-04	k: 1395	n:2520000
KCNN2   2520000 perm   2773 sec   (909 perm/sec)   p_kst 5.535714e-04   p_cons 9.973698e-01   p_joint 5.535714e-04

Joint ci ratio: 1.046253e-01	ci left: 5.255269e-04	ci right 5.839266e-04	k: 1402	n:2530000
Cons ci ratio: 1.266024e-04	ci left: 9.973045e-01	ci right 9.974311e-01	k: 2523342	n:2530000
KS ci ratio: 1.046253e-01	ci left: 5.255269e-04	ci right 5.839266e-04	k: 1402	n:2530000
KCNN2   2530000 perm   2793 sec   (906 perm/sec)   p_kst 5.541502e-04   p_cons 9.973684e-01   p_joint 5.541502e-04

Joint ci ratio: 1.045137e-01	ci left: 5.246081e-04	ci right 5.828396e-04	k: 1405	n:2540000
Cons ci ratio: 1.263499e-04	ci left: 9.973047e-01	ci right 9.974311e-01	k: 2533316	n:2540000
KS ci ratio: 1.045137e-01	ci left: 5.246081e-04	ci right 5.828396e-04	k: 1405	n:2540000
KCNN2   2540000 perm   2813 sec   (903 perm/sec)   p_kst 5.531496e-04   p_cons 9.973685e-01   p_joint 5.531496e-04

Joint ci ratio: 1.043653e-01	ci left: 5.240784e-04	ci right 5.821636e-04	k: 1409	n:2550000
Cons ci ratio: 1.260612e-04	ci left: 9.973066e-01	ci right 9.974327e-01	k: 2543294	n:2550000
KS ci ratio: 1.043653e-01	ci left: 5.240784e-04	ci right 5.821636e-04	k: 1409	n:2550000
KCNN2   2550000 perm   2833 sec   (900 perm/sec)   p_kst 5.525490e-04   p_cons 9.973702e-01   p_joint 5.525490e-04

Joint ci ratio: 1.041808e-01	ci left: 5.239334e-04	ci right 5.818935e-04	k: 1414	n:2560000
Cons ci ratio: 1.258026e-04	ci left: 9.973072e-01	ci right 9.974331e-01	k: 2553269	n:2560000
KS ci ratio: 1.041808e-01	ci left: 5.239334e-04	ci right 5.818935e-04	k: 1414	n:2560000
KCNN2   2560000 perm   2854 sec   (897 perm/sec)   p_kst 5.523437e-04   p_cons 9.973707e-01   p_joint 5.523437e-04

Joint ci ratio: 1.039606e-01	ci left: 5.241686e-04	ci right 5.820247e-04	k: 1420	n:2570000
Cons ci ratio: 1.255548e-04	ci left: 9.973075e-01	ci right 9.974331e-01	k: 2563243	n:2570000
KS ci ratio: 1.039606e-01	ci left: 5.241686e-04	ci right 5.820247e-04	k: 1420	n:2570000
KCNN2   2570000 perm   2874 sec   (894 perm/sec)   p_kst 5.525292e-04   p_cons 9.973708e-01   p_joint 5.525292e-04

Joint ci ratio: 1.038511e-01	ci left: 5.232695e-04	ci right 5.809618e-04	k: 1423	n:2580000
Cons ci ratio: 1.254381e-04	ci left: 9.973022e-01	ci right 9.974277e-01	k: 2573203	n:2580000
KS ci ratio: 1.038511e-01	ci left: 5.232695e-04	ci right 5.809618e-04	k: 1423	n:2580000
KCNN2   2580000 perm   2895 sec   (891 perm/sec)   p_kst 5.515504e-04   p_cons 9.973655e-01   p_joint 5.515504e-04

Joint ci ratio: 1.036330e-01	ci left: 5.235057e-04	ci right 5.810954e-04	k: 1429	n:2590000
Cons ci ratio: 1.251373e-04	ci left: 9.973048e-01	ci right 9.974300e-01	k: 2583183	n:2590000
KS ci ratio: 1.036330e-01	ci left: 5.235057e-04	ci right 5.810954e-04	k: 1429	n:2590000
KCNN2   2590000 perm   2915 sec   (888 perm/sec)   p_kst 5.517375e-04   p_cons 9.973680e-01   p_joint 5.517375e-04

Joint ci ratio: 1.035607e-01	ci left: 5.222415e-04	ci right 5.796496e-04	k: 1431	n:2600000
Cons ci ratio: 1.249026e-04	ci left: 9.973047e-01	ci right 9.974296e-01	k: 2593156	n:2600000
KS ci ratio: 1.035607e-01	ci left: 5.222415e-04	ci right 5.796496e-04	k: 1431	n:2600000
KCNN2   2600000 perm   2936 sec   (886 perm/sec)   p_kst 5.503846e-04   p_cons 9.973677e-01   p_joint 5.503846e-04

Joint ci ratio: 1.034524e-01	ci left: 5.213602e-04	ci right 5.786079e-04	k: 1434	n:2610000
Cons ci ratio: 1.246146e-04	ci left: 9.973068e-01	ci right 9.974315e-01	k: 2603135	n:2610000
KS ci ratio: 1.034524e-01	ci left: 5.213602e-04	ci right 5.786079e-04	k: 1434	n:2610000
KCNN2   2610000 perm   2956 sec   (883 perm/sec)   p_kst 5.494253e-04   p_cons 9.973697e-01   p_joint 5.494253e-04

Joint ci ratio: 1.031652e-01	ci left: 5.223449e-04	ci right 5.795318e-04	k: 1442	n:2620000
Cons ci ratio: 1.244462e-04	ci left: 9.973040e-01	ci right 9.974285e-01	k: 2613101	n:2620000
KS ci ratio: 1.031652e-01	ci left: 5.223449e-04	ci right 5.795318e-04	k: 1442	n:2620000
KCNN2   2620000 perm   2977 sec   (880 perm/sec)   p_kst 5.503817e-04   p_cons 9.973668e-01   p_joint 5.503817e-04

Joint ci ratio: 1.029158e-01	ci left: 5.229518e-04	ci right 5.800584e-04	k: 1449	n:2630000
Cons ci ratio: 1.241794e-04	ci left: 9.973054e-01	ci right 9.974296e-01	k: 2623078	n:2630000
KS ci ratio: 1.029158e-01	ci left: 5.229518e-04	ci right 5.800584e-04	k: 1449	n:2630000
KCNN2   2630000 perm   2998 sec   (877 perm/sec)   p_kst 5.509506e-04   p_cons 9.973681e-01   p_joint 5.509506e-04

Joint ci ratio: 1.027389e-01	ci left: 5.228161e-04	ci right 5.798038e-04	k: 1454	n:2640000
Cons ci ratio: 1.239858e-04	ci left: 9.973037e-01	ci right 9.974278e-01	k: 2633047	n:2640000
KS ci ratio: 1.027389e-01	ci left: 5.228161e-04	ci right 5.798038e-04	k: 1454	n:2640000
KCNN2   2640000 perm   3020 sec   (874 perm/sec)   p_kst 5.507576e-04   p_cons 9.973663e-01   p_joint 5.507576e-04

Joint ci ratio: 1.027037e-01	ci left: 5.212109e-04	ci right 5.780030e-04	k: 1455	n:2650000
Cons ci ratio: 1.237130e-04	ci left: 9.973055e-01	ci right 9.974293e-01	k: 2643025	n:2650000
KS ci ratio: 1.027037e-01	ci left: 5.212109e-04	ci right 5.780030e-04	k: 1455	n:2650000
KCNN2   2650000 perm   3041 sec   (871 perm/sec)   p_kst 5.490566e-04   p_cons 9.973679e-01   p_joint 5.490566e-04

Joint ci ratio: 1.025981e-01	ci left: 5.203503e-04	ci right 5.769868e-04	k: 1458	n:2660000
Cons ci ratio: 1.233801e-04	ci left: 9.973099e-01	ci right 9.974333e-01	k: 2653010	n:2660000
KS ci ratio: 1.025981e-01	ci left: 5.203503e-04	ci right 5.769868e-04	k: 1458	n:2660000
KCNN2   2660000 perm   3062 sec   (869 perm/sec)   p_kst 5.481203e-04   p_cons 9.973722e-01   p_joint 5.481203e-04

Joint ci ratio: 1.025279e-01	ci left: 5.191312e-04	ci right 5.755941e-04	k: 1460	n:2670000
Cons ci ratio: 1.231815e-04	ci left: 9.973086e-01	ci right 9.974319e-01	k: 2662980	n:2670000
KS ci ratio: 1.025279e-01	ci left: 5.191312e-04	ci right 5.755941e-04	k: 1460	n:2670000
KCNN2   2670000 perm   3083 sec   (866 perm/sec)   p_kst 5.468165e-04   p_cons 9.973708e-01   p_joint 5.468165e-04

Joint ci ratio: 1.023180e-01	ci left: 5.193756e-04	ci right 5.757425e-04	k: 1466	n:2680000
Cons ci ratio: 1.229927e-04	ci left: 9.973070e-01	ci right 9.974300e-01	k: 2672949	n:2680000
KS ci ratio: 1.023180e-01	ci left: 5.193756e-04	ci right 5.757425e-04	k: 1466	n:2680000
KCNN2   2680000 perm   3105 sec   (863 perm/sec)   p_kst 5.470149e-04   p_cons 9.973690e-01   p_joint 5.470149e-04

Joint ci ratio: 1.021441e-01	ci left: 5.192561e-04	ci right 5.755084e-04	k: 1471	n:2690000
Cons ci ratio: 1.227524e-04	ci left: 9.973076e-01	ci right 9.974304e-01	k: 2682924	n:2690000
KS ci ratio: 1.021441e-01	ci left: 5.192561e-04	ci right 5.755084e-04	k: 1471	n:2690000
KCNN2   2690000 perm   3127 sec   (860 perm/sec)   p_kst 5.468401e-04   p_cons 9.973695e-01   p_joint 5.468401e-04

Joint ci ratio: 1.020402e-01	ci left: 5.184157e-04	ci right 5.745164e-04	k: 1474	n:2700000
Cons ci ratio: 1.225568e-04	ci left: 9.973063e-01	ci right 9.974289e-01	k: 2692894	n:2700000
KS ci ratio: 1.020402e-01	ci left: 5.184157e-04	ci right 5.745164e-04	k: 1474	n:2700000
KCNN2   2700000 perm   3149 sec   (858 perm/sec)   p_kst 5.459259e-04   p_cons 9.973681e-01   p_joint 5.459259e-04

Joint ci ratio: 1.018333e-01	ci left: 5.186603e-04	ci right 5.746669e-04	k: 1480	n:2710000
Cons ci ratio: 1.223707e-04	ci left: 9.973047e-01	ci right 9.974271e-01	k: 2702863	n:2710000
KS ci ratio: 1.018333e-01	ci left: 5.186603e-04	ci right 5.746669e-04	k: 1480	n:2710000
KCNN2   2710000 perm   3170 sec   (855 perm/sec)   p_kst 5.461255e-04   p_cons 9.973664e-01   p_joint 5.461255e-04

Joint ci ratio: 1.014911e-01	ci left: 5.203364e-04	ci right 5.763240e-04	k: 1490	n:2720000
Cons ci ratio: 1.221084e-04	ci left: 9.973064e-01	ci right 9.974286e-01	k: 2712841	n:2720000
KS ci ratio: 1.014911e-01	ci left: 5.203364e-04	ci right 5.763240e-04	k: 1490	n:2720000
KCNN2   2720000 perm   3192 sec   (852 perm/sec)   p_kst 5.477941e-04   p_cons 9.973680e-01   p_joint 5.477941e-04

Joint ci ratio: 1.013892e-01	ci left: 5.195015e-04	ci right 5.753397e-04	k: 1493	n:2730000
Cons ci ratio: 1.218818e-04	ci left: 9.973066e-01	ci right 9.974286e-01	k: 2722815	n:2730000
KS ci ratio: 1.013892e-01	ci left: 5.195015e-04	ci right 5.753397e-04	k: 1493	n:2730000
KCNN2   2730000 perm   3213 sec   (850 perm/sec)   p_kst 5.468864e-04   p_cons 9.973681e-01   p_joint 5.468864e-04

Joint ci ratio: 1.011862e-01	ci left: 5.197398e-04	ci right 5.754852e-04	k: 1499	n:2740000
Cons ci ratio: 1.216649e-04	ci left: 9.973065e-01	ci right 9.974282e-01	k: 2732788	n:2740000
KS ci ratio: 1.011862e-01	ci left: 5.197398e-04	ci right 5.754852e-04	k: 1499	n:2740000
KCNN2   2740000 perm   3235 sec   (847 perm/sec)   p_kst 5.470803e-04   p_cons 9.973679e-01   p_joint 5.470803e-04

Joint ci ratio: 1.009845e-01	ci left: 5.199765e-04	ci right 5.756294e-04	k: 1505	n:2750000
Cons ci ratio: 1.214997e-04	ci left: 9.973042e-01	ci right 9.974257e-01	k: 2742755	n:2750000
KS ci ratio: 1.009845e-01	ci left: 5.199765e-04	ci right 5.756294e-04	k: 1505	n:2750000
KCNN2   2750000 perm   3257 sec   (844 perm/sec)   p_kst 5.472727e-04   p_cons 9.973655e-01   p_joint 5.472727e-04

Joint ci ratio: 1.008172e-01	ci left: 5.198584e-04	ci right 5.754011e-04	k: 1510	n:2760000
Cons ci ratio: 1.213015e-04	ci left: 9.973033e-01	ci right 9.974246e-01	k: 2752726	n:2760000
KS ci ratio: 1.008172e-01	ci left: 5.198584e-04	ci right 5.754011e-04	k: 1510	n:2760000
KCNN2   2760000 perm   3279 sec   (842 perm/sec)   p_kst 5.471014e-04   p_cons 9.973645e-01   p_joint 5.471014e-04

Joint ci ratio: 1.004522e-01	ci left: 5.218528e-04	ci right 5.773949e-04	k: 1521	n:2770000
Cons ci ratio: 1.210378e-04	ci left: 9.973054e-01	ci right 9.974264e-01	k: 2762705	n:2770000
KS ci ratio: 1.004522e-01	ci left: 5.218528e-04	ci right 5.773949e-04	k: 1521	n:2770000
KCNN2   2770000 perm   3300 sec   (839 perm/sec)   p_kst 5.490975e-04   p_cons 9.973664e-01   p_joint 5.490975e-04

Joint ci ratio: 1.001892e-01	ci left: 5.227812e-04	ci right 5.782678e-04	k: 1529	n:2780000
Cons ci ratio: 1.208585e-04	ci left: 9.973038e-01	ci right 9.974247e-01	k: 2772674	n:2780000
KS ci ratio: 1.001892e-01	ci left: 5.227812e-04	ci right 5.782678e-04	k: 1529	n:2780000
KCNN2   2780000 perm   3322 sec   (837 perm/sec)   p_kst 5.500000e-04   p_cons 9.973647e-01   p_joint 5.500000e-04

Joint ci ratio: 1.000585e-01	ci left: 5.223052e-04	ci right 5.776647e-04	k: 1533	n:2790000
Cons ci ratio: 1.206223e-04	ci left: 9.973047e-01	ci right 9.974254e-01	k: 2782650	n:2790000
KS ci ratio: 1.000585e-01	ci left: 5.223052e-04	ci right 5.776647e-04	k: 1533	n:2790000
KCNN2   2790000 perm   3344 sec   (834 perm/sec)   p_kst 5.494624e-04   p_cons 9.973656e-01   p_joint 5.494624e-04

Joint ci ratio: 9.976618e-02	ci left: 5.235738e-04	ci right 5.788962e-04	k: 1542	n:2800000
Cons ci ratio: 1.203629e-04	ci left: 9.973068e-01	ci right 9.974272e-01	k: 2792629	n:2800000
KS ci ratio: 9.976618e-02	ci left: 5.235738e-04	ci right 5.788962e-04	k: 1542	n:2800000
KCNN2   2800000 perm   3367 sec   (832 perm/sec)   p_kst 5.507143e-04   p_cons 9.973675e-01   p_joint 5.507143e-04

Outputting figure to mutsig2_images.part000000000089/KCNN2.2_1772_2800000_0.00055071_0.99737_0.00055071.png
                gene_name: KCNN2
               theta_stop: 0.100 
                    nperm: 2800000 
                     p_ks: 0.00055 
        ci_ks_bounds_left: 0.00052 
       ci_ks_bounds_right: 0.00058 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.00055 
     ci_joint_bounds_left: 0.00052 
    ci_joint_bounds_right: 0.00058 

Current progress: 67 percent done.
KCNN3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.087943e-02	ci left: 7.707371e-01	ci right 7.871001e-01	k: 7790	n:10000
KS ci ratio: 5.907576e-02	ci left: 2.965789e-01	ci right 3.147345e-01	k: 3056	n:10000
KCNN3   10000 perm   2 sec   (6274 perm/sec)   p_kst 3.056000e-01   p_cons 7.790000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000089/KCNN3.2_2250_10000_0.3056_0.779_1.png
                gene_name: KCNN3
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.31 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.79 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
KDM2A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.711733e-02	ci left: 5.173580e-01	ci right 5.370262e-01	k: 5272	n:10000
Cons ci ratio: 4.385883e-02	ci left: 4.342293e-01	ci right 4.538033e-01	k: 4440	n:10000
KS ci ratio: 5.875724e-02	ci left: 2.988593e-01	ci right 3.170527e-01	k: 3079	n:10000
KDM2A   10000 perm   2 sec   (5561 perm/sec)   p_kst 3.079000e-01   p_cons 4.440000e-01   p_joint 5.272000e-01

Outputting figure to mutsig2_images.part000000000089/KDM2A.2_3569_10000_0.3079_0.444_0.5272.png
                gene_name: KDM2A
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.53 
     ci_joint_bounds_left: 0.52 
    ci_joint_bounds_right: 0.54 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000089
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 89 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1723>
Subject: Job 8704246: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1723>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000090> was used as the working directory.
Started at Thu Nov 15 19:33:43 2012
Results reported at Thu Nov 15 22:16:39 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000090.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000090.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 90  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000090.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   9834.08 sec.
    Max Memory :      6047 MB
    Max Swap   :      8542 MB

    Max Processes  :         7
    Max Threads    :        72

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
90
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 90
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 90: processing genes 8052 - 8142
Calculating significance of each gene.
Using projection method.
8052	KERA	1
8053	KHDC1	1
8054	KHDC1L	1
8055	KHDRBS1	1
8056	KHDRBS2	2.430279e-02
8057	KHDRBS3	1
8058	KHK	1
8059	KHNYN	2.747705e-01
8060	KHSRP	1
8061	KIAA0020	1
8062	KIAA0090	1
8063	KIAA0100	1
8064	KIAA0101	1
8065	KIAA0141	1
8066	KIAA0146	1
8067	KIAA0174	1.581361e-01
In gene KIAA0182 the following bins exceed PROBCAP:
    THCA-BJ-A28S-TP	categ 6	N = 3191    n = 1	mu =   2.86e-07
    THCA-CE-A27D-TP	categ 6	N = 3202    n = 1	mu =   1.03e-07
8068	KIAA0182	7.514477e-02
8069	KIAA0195	2.751975e-01
8070	KIAA0196	1
8071	KIAA0226	1
8072	KIAA0232	4.752485e-01
In gene KIAA0240 the following bins exceed PROBCAP:
    THCA-ET-A25J-TP	categ 6	N = 3284    n = 1	mu =   1.02e-07
8073	KIAA0240	1.913503e-01
8074	KIAA0247	1
In gene KIAA0284 the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 2103    n = 1	mu =   2.41e-07
8075	KIAA0284	4.545537e-02
8076	KIAA0317	1
8077	KIAA0319	1
8078	KIAA0319L	1
8079	KIAA0355	1
8080	KIAA0368	1
8081	KIAA0391	1
8082	KIAA0406	1
8083	KIAA0408	1
8084	KIAA0415	1
8085	KIAA0427	1
8086	KIAA0430	4.348466e-01
8087	KIAA0467	6.167669e-01
8088	KIAA0494	1
8089	KIAA0495	1
8090	KIAA0513	6.443280e-02
8091	KIAA0528	1
8092	KIAA0556	5.025367e-01
8093	KIAA0562	1
8094	KIAA0564	1
8095	KIAA0586	1
8096	KIAA0649	1
8097	KIAA0652	1
8098	KIAA0664	1
8099	KIAA0748	1
8100	KIAA0753	3.420106e-01
In gene KIAA0754 the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 3794    n = 1	mu =   2.44e-07
8101	KIAA0754	3.640514e-01
8102	KIAA0776	1
8103	KIAA0802	1
8104	KIAA0831	1.928145e-01
8105	KIAA0892	1.380266e-02
8106	KIAA0895	1
8107	KIAA0895L	1
8108	KIAA0907	1.189050e-01
8109	KIAA0913	1
8110	KIAA0922	1
8111	KIAA0947	4.721430e-01
In gene KIAA1009 the following bins exceed PROBCAP:
    THCA-EL-A3D1-TP	categ 6	N = 3030    n = 1	mu =   7.33e-08
8112	KIAA1009	1.253221e-01
8113	KIAA1012	1
8114	KIAA1024	1
8115	KIAA1033	1
8116	KIAA1045	1
8117	KIAA1109	7.346234e-01
8118	KIAA1143	1
8119	KIAA1147	1
8120	KIAA1161	1
8121	KIAA1191	1
8122	KIAA1199	1
8123	KIAA1210	1
8124	KIAA1211	9.335061e-03
8125	KIAA1217	1
8126	KIAA1244	2.321712e-01
8127	KIAA1257	1
8128	KIAA1267	1
8129	KIAA1274	2.649198e-01
8130	KIAA1279	1
8131	KIAA1310	2.623337e-01
8132	KIAA1324	1
8133	KIAA1324L	1
8134	KIAA1328	1
8135	KIAA1370	1
8136	KIAA1377	1
8137	KIAA1383	1
8138	KIAA1407	1
8139	KIAA1409	5.417204e-01
8140	KIAA1429	1
8141	KIAA1430	1
8142	KIAA1432	2.810690e-02
Done

Running MutSig 2:
Scatter job 90: processing genes 8052 - 8142
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
KIAA1211
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.247453e-02	ci left: 9.022685e-01	ci right 9.136926e-01	k: 9081	n:10000
Cons ci ratio: 7.472467e-02	ci left: 2.076722e-01	ci right 2.238937e-01	k: 2157	n:10000
KS ci ratio: 2.167205e-02	ci left: 7.574741e-01	ci right 7.741708e-01	k: 7659	n:10000
KIAA1211   10000 perm   2 sec   (5522 perm/sec)   p_kst 7.659000e-01   p_cons 2.157000e-01   p_joint 9.081000e-01

Outputting figure to mutsig2_images.part000000000090/KIAA1211.3_3734_10000_0.7659_0.2157_0.9081.png
                gene_name: KIAA1211
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.77 
                   p_cons: 0.22 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.91 
     ci_joint_bounds_left: 0.90 
    ci_joint_bounds_right: 0.91 

Current progress: 17 percent done.
KIAA1432
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.239677e-02	ci left: 4.509930e-01	ci right 4.706299e-01	k: 4608	n:10000
Cons ci ratio: 1.512986e-01	ci left: 5.812294e-02	ci right 6.773362e-02	k: 628	n:10000
KS ci ratio: 6.488330e-02	ci left: 2.586449e-01	ci right 2.760908e-01	k: 2673	n:10000
KIAA1432   10000 perm   2 sec   (5691 perm/sec)   p_kst 2.673000e-01   p_cons 6.280000e-02   p_joint 4.608000e-01

Joint ci ratio: 1.869380e-02	ci left: 6.808734e-01	ci right 6.937721e-01	k: 13747	n:20000
Cons ci ratio: 1.105463e-01	ci left: 5.587115e-02	ci right 6.245774e-02	k: 1182	n:20000
KS ci ratio: 4.636475e-02	ci left: 2.571563e-01	ci right 2.694126e-01	k: 5265	n:20000
KIAA1432   20000 perm   4 sec   (5175 perm/sec)   p_kst 2.632500e-01   p_cons 5.910000e-02   p_joint 6.873500e-01

Joint ci ratio: 2.731105e-02	ci left: 4.015331e-01	ci right 4.126849e-01	k: 12213	n:30000
Cons ci ratio: 9.090286e-02	ci left: 5.570741e-02	ci right 6.104519e-02	k: 1750	n:30000
KS ci ratio: 3.786325e-02	ci left: 2.582233e-01	ci right 2.682226e-01	k: 7896	n:30000
KIAA1432   30000 perm   6 sec   (4998 perm/sec)   p_kst 2.632000e-01   p_cons 5.833333e-02   p_joint 4.071000e-01

Outputting figure to mutsig2_images.part000000000090/KIAA1432.3_4209_30000_0.2632_0.058333_0.4071.png
                gene_name: KIAA1432
               theta_stop: 0.091 
                    nperm: 30000 
                     p_ks: 0.26 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.27 
                   p_cons: 0.058 
      ci_cons_bounds_left: 0.056 
     ci_cons_bounds_right: 0.061 
                  p_joint: 0.41 
     ci_joint_bounds_left: 0.40 
    ci_joint_bounds_right: 0.41 

Current progress: 33 percent done.
KIAA0182
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.498839e-01	ci left: 9.148061e-04	ci right 2.597003e-03	k: 16	n:10000
Cons ci ratio: 1.251018e-01	ci left: 8.378084e-02	ci right 9.505967e-02	k: 893	n:10000
KS ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
KIAA0182   10000 perm   2 sec   (6393 perm/sec)   p_kst 5.000000e-04   p_cons 8.930000e-02   p_joint 1.600000e-03

Joint ci ratio: 1.047271e+00	ci left: 3.461416e-04	ci right 1.111263e-03	k: 13	n:20000
Cons ci ratio: 9.438160e-02	ci left: 7.564046e-02	ci right 8.318235e-02	k: 1587	n:20000
KS ci ratio: 1.306340e+00	ci left: 1.727069e-04	ci right 7.880065e-04	k: 8	n:20000
KIAA0182   20000 perm   3 sec   (5753 perm/sec)   p_kst 4.000000e-04   p_cons 7.935000e-02   p_joint 6.500000e-04

Joint ci ratio: 1.086959e+00	ci left: 2.067024e-04	ci right 6.986151e-04	k: 12	n:30000
Cons ci ratio: 7.657496e-02	ci left: 7.724892e-02	ci right 8.343264e-02	k: 2409	n:30000
KS ci ratio: 1.131361e+00	ci left: 1.830524e-04	ci right 6.559730e-04	k: 11	n:30000
KIAA0182   30000 perm   5 sec   (5481 perm/sec)   p_kst 3.666667e-04   p_cons 8.030000e-02   p_joint 4.000000e-04

Joint ci ratio: 9.797917e-01	ci left: 2.098994e-04	ci right 6.184302e-04	k: 15	n:40000
Cons ci ratio: 6.584194e-02	ci left: 7.871359e-02	ci right 8.409737e-02	k: 3255	n:40000
KS ci ratio: 1.011937e+00	ci left: 1.913610e-04	ci right 5.871709e-04	k: 14	n:40000
KIAA0182   40000 perm   8 sec   (5317 perm/sec)   p_kst 3.500000e-04   p_cons 8.137500e-02   p_joint 3.750000e-04

Joint ci ratio: 9.237773e-01	ci left: 1.980746e-04	ci right 5.443173e-04	k: 17	n:50000
Cons ci ratio: 5.889882e-02	ci left: 7.897805e-02	ci right 8.379068e-02	k: 4068	n:50000
KS ci ratio: 9.505685e-01	ci left: 1.829184e-04	ci right 5.196081e-04	k: 16	n:50000
KIAA0182   50000 perm   10 sec   (5183 perm/sec)   p_kst 3.200000e-04   p_cons 8.136000e-02   p_joint 3.400000e-04

Joint ci ratio: 8.763852e-01	ci left: 1.906644e-04	ci right 4.944703e-04	k: 19	n:60000
Cons ci ratio: 5.196221e-02	ci left: 8.437776e-02	ci right 8.889565e-02	k: 5197	n:60000
KS ci ratio: 8.991598e-01	ci left: 1.778084e-04	ci right 4.740881e-04	k: 18	n:60000
KIAA0182   60000 perm   12 sec   (5066 perm/sec)   p_kst 3.000000e-04   p_cons 8.661667e-02   p_joint 3.166667e-04

Joint ci ratio: 8.172364e-01	ci left: 1.969713e-04	ci right 4.757939e-04	k: 22	n:70000
Cons ci ratio: 4.811784e-02	ci left: 8.451242e-02	ci right 8.869335e-02	k: 6061	n:70000
KS ci ratio: 8.356095e-01	ci left: 1.857140e-04	ci right 4.585455e-04	k: 21	n:70000
KIAA0182   70000 perm   14 sec   (4963 perm/sec)   p_kst 3.000000e-04   p_cons 8.658571e-02   p_joint 3.142857e-04

Joint ci ratio: 7.277892e-01	ci left: 2.325847e-04	ci right 5.058080e-04	k: 28	n:80000
Cons ci ratio: 4.672567e-02	ci left: 7.896995e-02	ci right 8.276051e-02	k: 6468	n:80000
KS ci ratio: 7.686455e-01	ci left: 2.022434e-04	ci right 4.612773e-04	k: 25	n:80000
KIAA0182   80000 perm   16 sec   (4865 perm/sec)   p_kst 3.125000e-04   p_cons 8.085000e-02   p_joint 3.500000e-04

Joint ci ratio: 6.928376e-01	ci left: 2.340449e-04	ci right 4.888761e-04	k: 31	n:90000
Cons ci ratio: 4.392099e-02	ci left: 7.952246e-02	ci right 8.310458e-02	k: 7317	n:90000
KS ci ratio: 7.542870e-01	ci left: 1.887202e-04	ci right 4.232607e-04	k: 26	n:90000
KIAA0182   90000 perm   19 sec   (4775 perm/sec)   p_kst 2.888889e-04   p_cons 8.130000e-02   p_joint 3.444444e-04

Joint ci ratio: 6.822684e-01	ci left: 2.188897e-04	ci right 4.517148e-04	k: 32	n:100000
Cons ci ratio: 4.167581e-02	ci left: 7.958358e-02	ci right 8.298076e-02	k: 8127	n:100000
KS ci ratio: 7.542987e-01	ci left: 1.698474e-04	ci right 3.809372e-04	k: 26	n:100000
KIAA0182   100000 perm   21 sec   (4689 perm/sec)   p_kst 2.600000e-04   p_cons 8.127000e-02   p_joint 3.200000e-04

Joint ci ratio: 6.443327e-01	ci left: 2.292280e-04	ci right 4.530549e-04	k: 36	n:110000
Cons ci ratio: 3.977945e-02	ci left: 7.950229e-02	ci right 8.273802e-02	k: 8922	n:110000
KS ci ratio: 7.155900e-01	ci left: 1.765683e-04	ci right 3.786040e-04	k: 29	n:110000
KIAA0182   110000 perm   24 sec   (4613 perm/sec)   p_kst 2.636364e-04   p_cons 8.110909e-02   p_joint 3.272727e-04

Joint ci ratio: 6.197005e-01	ci left: 2.311167e-04	ci right 4.442592e-04	k: 39	n:120000
Cons ci ratio: 3.651461e-02	ci left: 8.602277e-02	ci right 8.923052e-02	k: 10514	n:120000
KS ci ratio: 7.155984e-01	ci left: 1.618537e-04	ci right 3.470554e-04	k: 29	n:120000
KIAA0182   120000 perm   26 sec   (4536 perm/sec)   p_kst 2.416667e-04   p_cons 8.761667e-02   p_joint 3.250000e-04

Joint ci ratio: 5.716852e-01	ci left: 2.590711e-04	ci right 4.719533e-04	k: 46	n:130000
Cons ci ratio: 3.504040e-02	ci left: 8.627459e-02	ci right 8.935921e-02	k: 11415	n:130000
KS ci ratio: 6.443498e-01	ci left: 1.939608e-04	ci right 3.833579e-04	k: 36	n:130000
KIAA0182   130000 perm   29 sec   (4459 perm/sec)   p_kst 2.769231e-04   p_cons 8.780769e-02   p_joint 3.538462e-04

Joint ci ratio: 6.276127e-01	ci left: 1.920859e-04	ci right 3.725381e-04	k: 38	n:140000
Cons ci ratio: 3.378410e-02	ci left: 8.624457e-02	ci right 8.921539e-02	k: 12281	n:140000
KS ci ratio: 6.047762e-01	ci left: 2.101673e-04	ci right 3.972730e-04	k: 41	n:140000
KIAA0182   140000 perm   32 sec   (4384 perm/sec)   p_kst 2.928571e-04   p_cons 8.772143e-02   p_joint 2.714286e-04

Joint ci ratio: 5.237325e-01	ci left: 2.762351e-04	ci right 4.772407e-04	k: 55	n:150000
Cons ci ratio: 3.264573e-02	ci left: 8.625998e-02	ci right 8.912932e-02	k: 13153	n:150000
KS ci ratio: 5.778819e-01	ci left: 2.188302e-04	ci right 4.014032e-04	k: 45	n:150000
KIAA0182   150000 perm   35 sec   (4317 perm/sec)   p_kst 3.000000e-04   p_cons 8.768667e-02   p_joint 3.666667e-04

Joint ci ratio: 4.899005e-01	ci left: 3.025812e-04	ci right 5.037496e-04	k: 63	n:160000
Cons ci ratio: 3.166099e-02	ci left: 8.604535e-02	ci right 8.881963e-02	k: 13988	n:160000
KS ci ratio: 5.435162e-01	ci left: 2.373392e-04	ci right 4.190764e-04	k: 51	n:160000
KIAA0182   160000 perm   38 sec   (4247 perm/sec)   p_kst 3.187500e-04   p_cons 8.742500e-02   p_joint 3.937500e-04

Joint ci ratio: 5.333581e-01	ci left: 2.335416e-04	ci right 4.077763e-04	k: 53	n:170000
Cons ci ratio: 3.075005e-02	ci left: 8.590971e-02	ci right 8.859850e-02	k: 14832	n:170000
KS ci ratio: 5.102505e-01	ci left: 2.590795e-04	ci right 4.410277e-04	k: 58	n:170000
KIAA0182   170000 perm   41 sec   (4133 perm/sec)   p_kst 3.411765e-04   p_cons 8.724706e-02   p_joint 3.117647e-04

Joint ci ratio: 5.102555e-01	ci left: 2.446857e-04	ci right 4.165273e-04	k: 58	n:180000
Cons ci ratio: 2.985404e-02	ci left: 8.610470e-02	ci right 8.871972e-02	k: 15733	n:180000
KS ci ratio: 4.861270e-01	ci left: 2.738315e-04	ci right 4.540141e-04	k: 64	n:180000
KIAA0182   180000 perm   44 sec   (4064 perm/sec)   p_kst 3.555556e-04   p_cons 8.740556e-02   p_joint 3.222222e-04

Joint ci ratio: 4.937904e-01	ci left: 2.501933e-04	ci right 4.183029e-04	k: 62	n:190000
Cons ci ratio: 2.907901e-02	ci left: 8.602398e-02	ci right 8.856758e-02	k: 16585	n:190000
KS ci ratio: 4.752835e-01	ci left: 2.732948e-04	ci right 4.478083e-04	k: 67	n:190000
KIAA0182   190000 perm   47 sec   (4003 perm/sec)   p_kst 3.526316e-04   p_cons 8.728947e-02   p_joint 3.263158e-04

Joint ci ratio: 4.752878e-01	ci left: 2.596295e-04	ci right 4.254189e-04	k: 67	n:200000
Cons ci ratio: 2.834712e-02	ci left: 8.603161e-02	ci right 8.851036e-02	k: 17453	n:200000
KS ci ratio: 4.618921e-01	ci left: 2.772680e-04	ci right 4.477634e-04	k: 71	n:200000
KIAA0182   200000 perm   51 sec   (3943 perm/sec)   p_kst 3.550000e-04   p_cons 8.726500e-02   p_joint 3.350000e-04

Joint ci ratio: 4.063941e-01	ci left: 3.531808e-04	ci right 5.372583e-04	k: 92	n:210000
Cons ci ratio: 2.765875e-02	ci left: 8.609130e-02	ci right 8.851058e-02	k: 18332	n:210000
KS ci ratio: 4.495724e-01	ci left: 2.809256e-04	ci right 4.476614e-04	k: 75	n:210000
KIAA0182   210000 perm   54 sec   (3889 perm/sec)   p_kst 3.571429e-04   p_cons 8.729524e-02   p_joint 4.380952e-04

Joint ci ratio: 3.999951e-01	ci left: 3.493803e-04	ci right 5.278500e-04	k: 95	n:220000
Cons ci ratio: 2.700974e-02	ci left: 8.619592e-02	ci right 8.856041e-02	k: 19222	n:220000
KS ci ratio: 4.409543e-01	ci left: 2.802632e-04	ci right 4.424693e-04	k: 78	n:220000
KIAA0182   220000 perm   57 sec   (3834 perm/sec)   p_kst 3.545455e-04   p_cons 8.737273e-02   p_joint 4.318182e-04

Joint ci ratio: 5.146552e-01	ci left: 1.877063e-04	ci right 3.210757e-04	k: 57	n:230000
Cons ci ratio: 2.639430e-02	ci left: 8.635256e-02	ci right 8.866655e-02	k: 20126	n:230000
KS ci ratio: 4.301973e-01	ci left: 2.835620e-04	ci right 4.425184e-04	k: 82	n:230000
KIAA0182   230000 perm   61 sec   (3779 perm/sec)   p_kst 3.565217e-04   p_cons 8.750435e-02   p_joint 2.478261e-04

Joint ci ratio: 5.102767e-01	ci left: 1.835126e-04	ci right 3.123992e-04	k: 58	n:240000
Cons ci ratio: 2.586631e-02	ci left: 8.620673e-02	ci right 8.846991e-02	k: 20960	n:240000
KS ci ratio: 4.302006e-01	ci left: 2.717466e-04	ci right 4.240809e-04	k: 82	n:240000
KIAA0182   240000 perm   64 sec   (3724 perm/sec)   p_kst 3.416667e-04   p_cons 8.733333e-02   p_joint 2.416667e-04

Joint ci ratio: 5.018423e-01	ci left: 1.831501e-04	ci right 3.089169e-04	k: 60	n:250000
Cons ci ratio: 2.536113e-02	ci left: 8.612073e-02	ci right 8.833685e-02	k: 21806	n:250000
KS ci ratio: 4.251106e-01	ci left: 2.680153e-04	ci right 4.159742e-04	k: 84	n:250000
KIAA0182   250000 perm   68 sec   (3675 perm/sec)   p_kst 3.360000e-04   p_cons 8.722400e-02   p_joint 2.400000e-04

Joint ci ratio: 4.938128e-01	ci left: 1.828318e-04	ci right 3.056867e-04	k: 62	n:260000
Cons ci ratio: 2.487000e-02	ci left: 8.613354e-02	ci right 8.830645e-02	k: 22676	n:260000
KS ci ratio: 4.201970e-01	ci left: 2.645809e-04	ci right 4.084814e-04	k: 86	n:260000
KIAA0182   260000 perm   72 sec   (3625 perm/sec)   p_kst 3.307692e-04   p_cons 8.721538e-02   p_joint 2.384615e-04

Joint ci ratio: 4.899410e-01	ci left: 1.793043e-04	ci right 2.985250e-04	k: 63	n:270000
Cons ci ratio: 2.441600e-02	ci left: 8.608316e-02	ci right 8.821460e-02	k: 23529	n:270000
KS ci ratio: 4.178045e-01	ci left: 2.580946e-04	ci right 3.974450e-04	k: 87	n:270000
KIAA0182   270000 perm   75 sec   (3578 perm/sec)   p_kst 3.222222e-04   p_cons 8.714444e-02   p_joint 2.333333e-04

Joint ci ratio: 4.861589e-01	ci left: 1.760322e-04	ci right 2.918714e-04	k: 64	n:280000
Cons ci ratio: 2.397253e-02	ci left: 8.612552e-02	ci right 8.821874e-02	k: 24407	n:280000
KS ci ratio: 4.154524e-01	ci left: 2.520737e-04	ci right 3.871947e-04	k: 88	n:280000
KIAA0182   280000 perm   79 sec   (3532 perm/sec)   p_kst 3.142857e-04   p_cons 8.716786e-02   p_joint 2.285714e-04

Joint ci ratio: 5.779256e-01	ci left: 1.131860e-04	ci right 2.076275e-04	k: 45	n:290000
Cons ci ratio: 2.354881e-02	ci left: 8.618930e-02	ci right 8.824654e-02	k: 25292	n:290000
KS ci ratio: 4.131394e-01	ci left: 2.464702e-04	ci right 3.776493e-04	k: 89	n:290000
KIAA0182   290000 perm   83 sec   (3485 perm/sec)   p_kst 3.068966e-04   p_cons 8.721379e-02   p_joint 1.551724e-04

Joint ci ratio: 5.717450e-01	ci left: 1.122614e-04	ci right 2.045199e-04	k: 46	n:300000
Cons ci ratio: 2.313082e-02	ci left: 8.635855e-02	ci right 8.838276e-02	k: 26210	n:300000
KS ci ratio: 4.021192e-01	ci left: 2.532124e-04	ci right 3.834272e-04	k: 94	n:300000
KIAA0182   300000 perm   87 sec   (3437 perm/sec)   p_kst 3.133333e-04   p_cons 8.736667e-02   p_joint 1.533333e-04

Joint ci ratio: 5.717465e-01	ci left: 1.086400e-04	ci right 1.979227e-04	k: 46	n:310000
Cons ci ratio: 2.274857e-02	ci left: 8.641770e-02	ci right 8.840938e-02	k: 27097	n:310000
KS ci ratio: 4.000207e-01	ci left: 2.479445e-04	ci right 3.746084e-04	k: 95	n:310000
KIAA0182   310000 perm   91 sec   (3396 perm/sec)   p_kst 3.064516e-04   p_cons 8.740968e-02   p_joint 1.483871e-04

Joint ci ratio: 5.717479e-01	ci left: 1.052449e-04	ci right 1.917378e-04	k: 46	n:320000
Cons ci ratio: 2.240177e-02	ci left: 8.635215e-02	ci right 8.831158e-02	k: 27945	n:320000
KS ci ratio: 3.959185e-01	ci left: 2.458206e-04	ci right 3.697745e-04	k: 97	n:320000
KIAA0182   320000 perm   95 sec   (3357 perm/sec)   p_kst 3.031250e-04   p_cons 8.732813e-02   p_joint 1.437500e-04

Joint ci ratio: 5.599576e-01	ci left: 1.072486e-04	ci right 1.928471e-04	k: 48	n:330000
Cons ci ratio: 2.203851e-02	ci left: 8.651994e-02	ci right 8.845095e-02	k: 28869	n:330000
KS ci ratio: 3.899943e-01	ci left: 2.465641e-04	ci right 3.685540e-04	k: 100	n:330000
KIAA0182   330000 perm   100 sec   (3303 perm/sec)   p_kst 3.030303e-04   p_cons 8.748182e-02   p_joint 1.454545e-04

Joint ci ratio: 5.488678e-01	ci left: 1.091518e-04	ci right 1.938742e-04	k: 50	n:340000
Cons ci ratio: 2.171513e-02	ci left: 8.651128e-02	ci right 8.841340e-02	k: 29736	n:340000
KS ci ratio: 3.843283e-01	ci left: 2.472769e-04	ci right 3.673924e-04	k: 103	n:340000
KIAA0182   340000 perm   104 sec   (3266 perm/sec)   p_kst 3.029412e-04   p_cons 8.745882e-02   p_joint 1.470588e-04

Joint ci ratio: 5.488690e-01	ci left: 1.060331e-04	ci right 1.883351e-04	k: 50	n:350000
Cons ci ratio: 2.140023e-02	ci left: 8.654312e-02	ci right 8.841801e-02	k: 30617	n:350000
KS ci ratio: 3.771434e-01	ci left: 2.505468e-04	ci right 3.694127e-04	k: 107	n:350000
KIAA0182   350000 perm   108 sec   (3231 perm/sec)   p_kst 3.057143e-04   p_cons 8.747714e-02   p_joint 1.428571e-04

Joint ci ratio: 5.435662e-01	ci left: 1.054819e-04	ci right 1.862614e-04	k: 51	n:360000
Cons ci ratio: 2.109680e-02	ci left: 8.658719e-02	ci right 8.843612e-02	k: 31503	n:360000
KS ci ratio: 3.720121e-01	ci left: 2.511360e-04	ci right 3.682655e-04	k: 110	n:360000
KIAA0182   360000 perm   113 sec   (3195 perm/sec)   p_kst 3.055556e-04   p_cons 8.750833e-02   p_joint 1.416667e-04

Joint ci ratio: 5.334048e-01	ci left: 1.073008e-04	ci right 1.873616e-04	k: 53	n:370000
Cons ci ratio: 2.079712e-02	ci left: 8.669632e-02	ci right 8.852096e-02	k: 32414	n:370000
KS ci ratio: 3.639053e-01	ci left: 2.566128e-04	ci right 3.730697e-04	k: 115	n:370000
KIAA0182   370000 perm   117 sec   (3158 perm/sec)   p_kst 3.108108e-04   p_cons 8.760541e-02   p_joint 1.432432e-04

Joint ci ratio: 3.277448e-01	ci left: 3.147600e-04	ci right 4.404329e-04	k: 142	n:380000
Cons ci ratio: 2.051797e-02	ci left: 8.673700e-02	ci right 8.853771e-02	k: 33301	n:380000
KS ci ratio: 3.623479e-01	ci left: 2.522512e-04	ci right 3.661229e-04	k: 116	n:380000
KIAA0182   380000 perm   122 sec   (3125 perm/sec)   p_kst 3.052632e-04   p_cons 8.763421e-02   p_joint 3.736842e-04

Joint ci ratio: 3.254773e-01	ci left: 3.113969e-04	ci right 4.346871e-04	k: 144	n:390000
Cons ci ratio: 2.024521e-02	ci left: 8.681149e-02	ci right 8.858951e-02	k: 34202	n:390000
KS ci ratio: 3.623493e-01	ci left: 2.457831e-04	ci right 3.567354e-04	k: 116	n:390000
KIAA0182   390000 perm   126 sec   (3091 perm/sec)   p_kst 2.974359e-04   p_cons 8.769744e-02   p_joint 3.692308e-04

Joint ci ratio: 3.232563e-01	ci left: 3.082048e-04	ci right 4.292258e-04	k: 146	n:400000
Cons ci ratio: 1.999648e-02	ci left: 8.677539e-02	ci right 8.853058e-02	k: 35060	n:400000
KS ci ratio: 3.592919e-01	ci left: 2.441852e-04	ci right 3.532685e-04	k: 118	n:400000
KIAA0182   400000 perm   131 sec   (3059 perm/sec)   p_kst 2.950000e-04   p_cons 8.765000e-02   p_joint 3.650000e-04

Joint ci ratio: 3.210802e-01	ci left: 3.051711e-04	ci right 4.240282e-04	k: 148	n:410000
Cons ci ratio: 1.976696e-02	ci left: 8.665863e-02	ci right 8.839111e-02	k: 35884	n:410000
KS ci ratio: 3.577926e-01	ci left: 2.404487e-04	ci right 3.473102e-04	k: 119	n:410000
KIAA0182   410000 perm   135 sec   (3027 perm/sec)   p_kst 2.902439e-04   p_cons 8.752195e-02   p_joint 3.609756e-04

Joint ci ratio: 3.189473e-01	ci left: 3.022845e-04	ci right 4.190755e-04	k: 150	n:420000
Cons ci ratio: 1.953378e-02	ci left: 8.663998e-02	ci right 8.835143e-02	k: 36747	n:420000
KS ci ratio: 3.548482e-01	ci left: 2.390594e-04	ci right 3.442274e-04	k: 121	n:420000
KIAA0182   420000 perm   140 sec   (2997 perm/sec)   p_kst 2.880952e-04   p_cons 8.749286e-02   p_joint 3.571429e-04

Joint ci ratio: 3.189487e-01	ci left: 2.952545e-04	ci right 4.093299e-04	k: 150	n:430000
Cons ci ratio: 1.931036e-02	ci left: 8.660843e-02	ci right 8.829946e-02	k: 37604	n:430000
KS ci ratio: 3.548494e-01	ci left: 2.334997e-04	ci right 3.362223e-04	k: 121	n:430000
KIAA0182   430000 perm   145 sec   (2967 perm/sec)   p_kst 2.813953e-04   p_cons 8.745116e-02   p_joint 3.488372e-04

Joint ci ratio: 3.168578e-01	ci left: 2.927269e-04	ci right 4.049340e-04	k: 152	n:440000
Cons ci ratio: 1.909090e-02	ci left: 8.660783e-02	ci right 8.827942e-02	k: 38474	n:440000
KS ci ratio: 3.519764e-01	ci left: 2.323348e-04	ci right 3.335283e-04	k: 123	n:440000
KIAA0182   440000 perm   150 sec   (2937 perm/sec)   p_kst 2.795455e-04   p_cons 8.744091e-02   p_joint 3.454545e-04

Joint ci ratio: 3.148074e-01	ci left: 2.903140e-04	ci right 4.007311e-04	k: 154	n:450000
Cons ci ratio: 1.886168e-02	ci left: 8.675119e-02	ci right 8.840523e-02	k: 39409	n:450000
KS ci ratio: 3.491721e-01	ci left: 2.312249e-04	ci right 3.309509e-04	k: 125	n:450000
KIAA0182   450000 perm   155 sec   (2907 perm/sec)   p_kst 2.777778e-04   p_cons 8.757556e-02   p_joint 3.422222e-04

Joint ci ratio: 5.018707e-01	ci left: 9.953691e-05	ci right 1.678923e-04	k: 60	n:460000
Cons ci ratio: 1.866411e-02	ci left: 8.668711e-02	ci right 8.832243e-02	k: 40251	n:460000
KS ci ratio: 3.450880e-01	ci left: 2.321515e-04	ci right 3.308444e-04	k: 128	n:460000
KIAA0182   460000 perm   160 sec   (2878 perm/sec)   p_kst 2.782609e-04   p_cons 8.750217e-02   p_joint 1.304348e-04

Joint ci ratio: 5.018715e-01	ci left: 9.741907e-05	ci right 1.643202e-04	k: 60	n:470000
Cons ci ratio: 1.846672e-02	ci left: 8.667670e-02	ci right 8.829435e-02	k: 41117	n:470000
KS ci ratio: 3.450890e-01	ci left: 2.272120e-04	ci right 3.238053e-04	k: 128	n:470000
KIAA0182   470000 perm   165 sec   (2850 perm/sec)   p_kst 2.723404e-04   p_cons 8.748298e-02   p_joint 1.276596e-04

Joint ci ratio: 4.978078e-01	ci left: 9.721003e-05	ci right 1.632409e-04	k: 61	n:480000
Cons ci ratio: 1.827188e-02	ci left: 8.669793e-02	ci right 8.829872e-02	k: 41998	n:480000
KS ci ratio: 3.411449e-01	ci left: 2.281899e-04	ci right 3.238458e-04	k: 131	n:480000
KIAA0182   480000 perm   170 sec   (2822 perm/sec)   p_kst 2.729167e-04   p_cons 8.749583e-02   p_joint 1.270833e-04

Joint ci ratio: 6.823607e-01	ci left: 4.466975e-05	ci right 9.219152e-05	k: 32	n:490000
Cons ci ratio: 1.884329e-02	ci left: 8.038790e-02	ci right 8.191909e-02	k: 39764	n:490000
KS ci ratio: 3.373331e-01	ci left: 2.291339e-04	ci right 3.238788e-04	k: 134	n:490000
KIAA0182   490000 perm   175 sec   (2795 perm/sec)   p_kst 2.734694e-04   p_cons 8.115102e-02   p_joint 6.530612e-05

Joint ci ratio: 6.823612e-01	ci left: 4.377635e-05	ci right 9.034771e-05	k: 32	n:500000
Cons ci ratio: 1.866506e-02	ci left: 8.030692e-02	ci right 8.182194e-02	k: 40531	n:500000
KS ci ratio: 3.360912e-01	ci left: 2.263821e-04	ci right 3.195698e-04	k: 135	n:500000
KIAA0182   500000 perm   181 sec   (2765 perm/sec)   p_kst 2.700000e-04   p_cons 8.106200e-02   p_joint 6.400000e-05

Joint ci ratio: 2.997193e-01	ci left: 2.851147e-04	ci right 3.873689e-04	k: 170	n:510000
Cons ci ratio: 1.847888e-02	ci left: 8.033266e-02	ci right 8.183289e-02	k: 41351	n:510000
KS ci ratio: 3.324444e-01	ci left: 2.273320e-04	ci right 3.196779e-04	k: 138	n:510000
KIAA0182   510000 perm   186 sec   (2739 perm/sec)   p_kst 2.705882e-04   p_cons 8.108039e-02   p_joint 3.333333e-04

Joint ci ratio: 2.962740e-01	ci left: 2.867491e-04	ci right 3.881851e-04	k: 174	n:520000
Cons ci ratio: 1.829581e-02	ci left: 8.037663e-02	ci right 8.186266e-02	k: 42181	n:520000
KS ci ratio: 3.300785e-01	ci left: 2.264865e-04	ci right 3.176952e-04	k: 140	n:520000
KIAA0182   520000 perm   192 sec   (2715 perm/sec)   p_kst 2.692308e-04   p_cons 8.111731e-02   p_joint 3.346154e-04

Joint ci ratio: 2.962749e-01	ci left: 2.813386e-04	ci right 3.808611e-04	k: 174	n:530000
Cons ci ratio: 1.812633e-02	ci left: 8.035137e-02	ci right 8.182302e-02	k: 42975	n:530000
KS ci ratio: 3.300793e-01	ci left: 2.222131e-04	ci right 3.117011e-04	k: 140	n:530000
KIAA0182   530000 perm   197 sec   (2689 perm/sec)   p_kst 2.641509e-04   p_cons 8.108491e-02   p_joint 3.283019e-04

Joint ci ratio: 2.913222e-01	ci left: 2.864211e-04	ci right 3.857355e-04	k: 180	n:540000
Cons ci ratio: 1.796505e-02	ci left: 8.029760e-02	ci right 8.175505e-02	k: 43753	n:540000
KS ci ratio: 3.232718e-01	ci left: 2.282982e-04	ci right 3.179477e-04	k: 146	n:540000
KIAA0182   540000 perm   203 sec   (2664 perm/sec)   p_kst 2.703704e-04   p_cons 8.102407e-02   p_joint 3.333333e-04

Joint ci ratio: 2.889376e-01	ci left: 2.862711e-04	ci right 3.845725e-04	k: 183	n:550000
Cons ci ratio: 1.780126e-02	ci left: 8.030198e-02	ci right 8.174608e-02	k: 44562	n:550000
KS ci ratio: 3.210951e-01	ci left: 2.274896e-04	ci right 3.160963e-04	k: 148	n:550000
KIAA0182   550000 perm   208 sec   (2640 perm/sec)   p_kst 2.690909e-04   p_cons 8.102182e-02   p_joint 3.327273e-04

Joint ci ratio: 2.873804e-01	ci left: 2.844724e-04	ci right 3.815340e-04	k: 185	n:560000
Cons ci ratio: 1.763806e-02	ci left: 8.033827e-02	ci right 8.176964e-02	k: 45389	n:560000
KS ci ratio: 3.200235e-01	ci left: 2.250693e-04	ci right 3.123807e-04	k: 149	n:560000
KIAA0182   560000 perm   214 sec   (2617 perm/sec)   p_kst 2.660714e-04   p_cons 8.105179e-02   p_joint 3.303571e-04

Joint ci ratio: 2.835935e-01	ci left: 2.876257e-04	ci right 3.842387e-04	k: 190	n:570000
Cons ci ratio: 1.748359e-02	ci left: 8.033665e-02	ci right 8.175533e-02	k: 46195	n:570000
KS ci ratio: 3.158397e-01	ci left: 2.275784e-04	ci right 3.144759e-04	k: 153	n:570000
KIAA0182   570000 perm   220 sec   (2594 perm/sec)   p_kst 2.684211e-04   p_cons 8.104386e-02   p_joint 3.333333e-04

Joint ci ratio: 2.828546e-01	ci left: 2.842682e-04	ci right 3.794602e-04	k: 191	n:580000
Cons ci ratio: 1.732929e-02	ci left: 8.036777e-02	ci right 8.177435e-02	k: 47020	n:580000
KS ci ratio: 3.148196e-01	ci left: 2.252423e-04	ci right 3.109141e-04	k: 154	n:580000
KIAA0182   580000 perm   226 sec   (2570 perm/sec)   p_kst 2.655172e-04   p_cons 8.106897e-02   p_joint 3.293103e-04

Joint ci ratio: 2.799533e-01	ci left: 2.857514e-04	ci right 3.802855e-04	k: 195	n:590000
Cons ci ratio: 1.717921e-02	ci left: 8.039620e-02	ci right 8.179097e-02	k: 47844	n:590000
KS ci ratio: 3.118164e-01	ci left: 2.261097e-04	ci right 3.111276e-04	k: 157	n:590000
KIAA0182   590000 perm   232 sec   (2548 perm/sec)   p_kst 2.661017e-04   p_cons 8.109153e-02   p_joint 3.305085e-04

Joint ci ratio: 2.785361e-01	ci left: 2.840888e-04	ci right 3.775136e-04	k: 197	n:600000
Cons ci ratio: 1.703410e-02	ci left: 8.041377e-02	ci right 8.179695e-02	k: 48662	n:600000
KS ci ratio: 3.098616e-01	ci left: 2.254145e-04	ci right 3.095347e-04	k: 159	n:600000
KIAA0182   600000 perm   238 sec   (2526 perm/sec)   p_kst 2.650000e-04   p_cons 8.110333e-02   p_joint 3.283333e-04

Joint ci ratio: 2.750841e-01	ci left: 2.870595e-04	ci right 3.800890e-04	k: 202	n:610000
Cons ci ratio: 1.689837e-02	ci left: 8.038019e-02	ci right 8.175167e-02	k: 49449	n:610000
KS ci ratio: 3.060592e-01	ci left: 2.277699e-04	ci right 3.115228e-04	k: 163	n:610000
KIAA0182   610000 perm   244 sec   (2504 perm/sec)   p_kst 2.672131e-04   p_cons 8.106393e-02   p_joint 3.311475e-04

Joint ci ratio: 2.737392e-01	ci left: 2.854334e-04	ci right 3.774058e-04	k: 204	n:620000
Cons ci ratio: 1.675441e-02	ci left: 8.044895e-02	ci right 8.180980e-02	k: 50299	n:620000
KS ci ratio: 3.051307e-01	ci left: 2.255854e-04	ci right 3.082345e-04	k: 164	n:620000
KIAA0182   620000 perm   250 sec   (2483 perm/sec)   p_kst 2.645161e-04   p_cons 8.112742e-02   p_joint 3.290323e-04

Joint ci ratio: 2.717580e-01	ci left: 2.853389e-04	ci right 3.765020e-04	k: 207	n:630000
Cons ci ratio: 1.663140e-02	ci left: 8.036062e-02	ci right 8.170990e-02	k: 51051	n:630000
KS ci ratio: 3.023940e-01	ci left: 2.264038e-04	ci right 3.084656e-04	k: 167	n:630000
KIAA0182   630000 perm   256 sec   (2463 perm/sec)   p_kst 2.650794e-04   p_cons 8.103333e-02   p_joint 3.285714e-04

Joint ci ratio: 2.698192e-01	ci left: 2.852498e-04	ci right 3.756241e-04	k: 210	n:640000
Cons ci ratio: 1.650171e-02	ci left: 8.035914e-02	ci right 8.169778e-02	k: 51857	n:640000
KS ci ratio: 3.006101e-01	ci left: 2.257548e-04	ci right 3.070065e-04	k: 169	n:640000
KIAA0182   640000 perm   262 sec   (2442 perm/sec)   p_kst 2.640625e-04   p_cons 8.102656e-02   p_joint 3.281250e-04

Joint ci ratio: 2.672974e-01	ci left: 2.866009e-04	ci right 3.764124e-04	k: 214	n:650000
Cons ci ratio: 1.637078e-02	ci left: 8.039607e-02	ci right 8.172459e-02	k: 52688	n:650000
KS ci ratio: 2.971344e-01	ci left: 2.279742e-04	ci right 3.088972e-04	k: 173	n:650000
KIAA0182   650000 perm   268 sec   (2421 perm/sec)   p_kst 2.661538e-04   p_cons 8.105846e-02   p_joint 3.292308e-04

Joint ci ratio: 2.660630e-01	ci left: 2.850862e-04	ci right 3.739416e-04	k: 216	n:660000
Cons ci ratio: 1.624820e-02	ci left: 8.038361e-02	ci right 8.170189e-02	k: 53487	n:660000
KS ci ratio: 2.954415e-01	ci left: 2.273251e-04	ci right 3.074718e-04	k: 175	n:660000
KIAA0182   660000 perm   275 sec   (2401 perm/sec)   p_kst 2.651515e-04   p_cons 8.104091e-02   p_joint 3.272727e-04

Joint ci ratio: 2.642428e-01	ci left: 2.850112e-04	ci right 3.731350e-04	k: 219	n:670000
Cons ci ratio: 1.613448e-02	ci left: 8.031505e-02	ci right 8.162290e-02	k: 54248	n:670000
KS ci ratio: 2.937772e-01	ci left: 2.266967e-04	ci right 3.060877e-04	k: 177	n:670000
KIAA0182   670000 perm   281 sec   (2383 perm/sec)   p_kst 2.641791e-04   p_cons 8.096716e-02   p_joint 3.268657e-04

Joint ci ratio: 2.607110e-01	ci left: 2.890630e-04	ci right 3.770503e-04	k: 225	n:680000
Cons ci ratio: 1.602470e-02	ci left: 8.023389e-02	ci right 8.153145e-02	k: 54999	n:680000
KS ci ratio: 2.905306e-01	ci left: 2.288143e-04	ci right 3.078986e-04	k: 181	n:680000
KIAA0182   680000 perm   288 sec   (2365 perm/sec)   p_kst 2.661765e-04   p_cons 8.088088e-02   p_joint 3.308824e-04

Joint ci ratio: 2.589977e-01	ci left: 2.889383e-04	ci right 3.762162e-04	k: 228	n:690000
Cons ci ratio: 1.591170e-02	ci left: 8.020565e-02	ci right 8.149352e-02	k: 55785	n:690000
KS ci ratio: 2.889475e-01	ci left: 2.281861e-04	ci right 3.065449e-04	k: 183	n:690000
KIAA0182   690000 perm   294 sec   (2346 perm/sec)   p_kst 2.652174e-04   p_cons 8.084783e-02   p_joint 3.304348e-04

Joint ci ratio: 2.567648e-01	ci left: 2.901556e-04	ci right 3.769245e-04	k: 232	n:700000
Cons ci ratio: 1.579483e-02	ci left: 8.023661e-02	ci right 8.151543e-02	k: 56612	n:700000
KS ci ratio: 2.866203e-01	ci left: 2.289027e-04	ci right 3.067599e-04	k: 186	n:700000
KIAA0182   700000 perm   301 sec   (2328 perm/sec)   p_kst 2.657143e-04   p_cons 8.087429e-02   p_joint 3.314286e-04

Joint ci ratio: 2.562160e-01	ci left: 2.873867e-04	ci right 3.731146e-04	k: 233	n:710000
Cons ci ratio: 1.568302e-02	ci left: 8.024288e-02	ci right 8.151266e-02	k: 57422	n:710000
KS ci ratio: 2.858573e-01	ci left: 2.269860e-04	ci right 3.039487e-04	k: 187	n:710000
KIAA0182   710000 perm   307 sec   (2309 perm/sec)   p_kst 2.633803e-04   p_cons 8.087606e-02   p_joint 3.281690e-04

Joint ci ratio: 2.556707e-01	ci left: 2.846950e-04	ci right 3.694103e-04	k: 234	n:720000
Cons ci ratio: 1.557850e-02	ci left: 8.020194e-02	ci right 8.146254e-02	k: 58198	n:720000
KS ci ratio: 2.851004e-01	ci left: 2.251228e-04	ci right 3.012153e-04	k: 188	n:720000
KIAA0182   720000 perm   314 sec   (2292 perm/sec)   p_kst 2.611111e-04   p_cons 8.083056e-02   p_joint 3.250000e-04

Joint ci ratio: 2.545899e-01	ci left: 2.833596e-04	ci right 3.672645e-04	k: 236	n:730000
Cons ci ratio: 1.546876e-02	ci left: 8.023178e-02	ci right 8.148388e-02	k: 59025	n:730000
KS ci ratio: 2.843495e-01	ci left: 2.233110e-04	ci right 2.985565e-04	k: 189	n:730000
KIAA0182   730000 perm   321 sec   (2275 perm/sec)   p_kst 2.589041e-04   p_cons 8.085616e-02   p_joint 3.232877e-04

Joint ci ratio: 2.535226e-01	ci left: 2.820610e-04	ci right 3.651759e-04	k: 238	n:740000
Cons ci ratio: 1.536704e-02	ci left: 8.020562e-02	ci right 8.144901e-02	k: 59811	n:740000
KS ci ratio: 2.828647e-01	ci left: 2.228038e-04	ci right 2.974164e-04	k: 191	n:740000
KIAA0182   740000 perm   328 sec   (2258 perm/sec)   p_kst 2.581081e-04   p_cons 8.082568e-02   p_joint 3.216216e-04

Joint ci ratio: 2.519463e-01	ci left: 2.820468e-04	ci right 3.645597e-04	k: 241	n:750000
Cons ci ratio: 1.525621e-02	ci left: 8.028781e-02	ci right 8.152343e-02	k: 60678	n:750000
KS ci ratio: 2.814030e-01	ci left: 2.223110e-04	ci right 2.963057e-04	k: 193	n:750000
KIAA0182   750000 perm   335 sec   (2241 perm/sec)   p_kst 2.573333e-04   p_cons 8.090400e-02   p_joint 3.213333e-04

Joint ci ratio: 2.509118e-01	ci left: 2.808014e-04	ci right 3.625600e-04	k: 243	n:760000
Cons ci ratio: 1.515726e-02	ci left: 8.027478e-02	ci right 8.150210e-02	k: 61474	n:760000
KS ci ratio: 2.799637e-01	ci left: 2.218323e-04	ci right 2.952233e-04	k: 195	n:760000
KIAA0182   760000 perm   342 sec   (2224 perm/sec)   p_kst 2.565789e-04   p_cons 8.088684e-02   p_joint 3.197368e-04

Joint ci ratio: 2.493835e-01	ci left: 2.808065e-04	ci right 3.619913e-04	k: 246	n:770000
Cons ci ratio: 1.506166e-02	ci left: 8.024787e-02	ci right 8.146698e-02	k: 62259	n:770000
KS ci ratio: 2.778453e-01	ci left: 2.225750e-04	ci right 2.955571e-04	k: 198	n:770000
KIAA0182   770000 perm   349 sec   (2207 perm/sec)   p_kst 2.571429e-04   p_cons 8.085584e-02   p_joint 3.194805e-04

Joint ci ratio: 2.473882e-01	ci left: 2.820155e-04	ci right 3.627971e-04	k: 250	n:780000
Cons ci ratio: 1.496642e-02	ci left: 8.023572e-02	ci right 8.144688e-02	k: 63055	n:780000
KS ci ratio: 2.757743e-01	ci left: 2.233007e-04	ci right 2.958803e-04	k: 201	n:780000
KIAA0182   780000 perm   356 sec   (2191 perm/sec)   p_kst 2.576923e-04   p_cons 8.083974e-02   p_joint 3.205128e-04

Joint ci ratio: 2.464087e-01	ci left: 2.808207e-04	ci right 3.608927e-04	k: 252	n:790000
Cons ci ratio: 1.486980e-02	ci left: 8.025545e-02	ci right 8.145902e-02	k: 63876	n:790000
KS ci ratio: 2.750945e-01	ci left: 2.216525e-04	ci right 2.934881e-04	k: 202	n:790000
KIAA0182   790000 perm   363 sec   (2175 perm/sec)   p_kst 2.556962e-04   p_cons 8.085570e-02   p_joint 3.189873e-04

Joint ci ratio: 2.454406e-01	ci left: 2.796563e-04	ci right 3.590353e-04	k: 254	n:800000
Cons ci ratio: 1.478062e-02	ci left: 8.021865e-02	ci right 8.141439e-02	k: 64652	n:800000
KS ci ratio: 2.744197e-01	ci left: 2.200457e-04	ci right 2.911554e-04	k: 203	n:800000
KIAA0182   800000 perm   371 sec   (2159 perm/sec)   p_kst 2.537500e-04   p_cons 8.081500e-02   p_joint 3.175000e-04

Joint ci ratio: 2.430689e-01	ci left: 2.819989e-04	ci right 3.611527e-04	k: 259	n:810000
Cons ci ratio: 1.469010e-02	ci left: 8.021231e-02	ci right 8.140057e-02	k: 65452	n:810000
KS ci ratio: 2.717680e-01	ci left: 2.219293e-04	ci right 2.928364e-04	k: 207	n:810000
KIAA0182   810000 perm   378 sec   (2143 perm/sec)   p_kst 2.555556e-04   p_cons 8.080494e-02   p_joint 3.197531e-04

Joint ci ratio: 2.416786e-01	ci left: 2.819962e-04	ci right 3.606286e-04	k: 262	n:820000
Cons ci ratio: 1.460289e-02	ci left: 8.018913e-02	ci right 8.136993e-02	k: 66238	n:820000
KS ci ratio: 2.698290e-01	ci left: 2.226330e-04	ci right 2.931715e-04	k: 210	n:820000
KIAA0182   820000 perm   385 sec   (2127 perm/sec)   p_kst 2.560976e-04   p_cons 8.077805e-02   p_joint 3.195122e-04

Joint ci ratio: 2.412208e-01	ci left: 2.797306e-04	ci right 3.575614e-04	k: 263	n:830000
Cons ci ratio: 1.451769e-02	ci left: 8.016172e-02	ci right 8.133518e-02	k: 67020	n:830000
KS ci ratio: 2.691922e-01	ci left: 2.210741e-04	ci right 2.909254e-04	k: 211	n:830000
KIAA0182   830000 perm   393 sec   (2113 perm/sec)   p_kst 2.542169e-04   p_cons 8.074699e-02   p_joint 3.168675e-04

Joint ci ratio: 2.398618e-01	ci left: 2.797566e-04	ci right 3.570909e-04	k: 266	n:840000
Cons ci ratio: 1.443177e-02	ci left: 8.015754e-02	ci right 8.132393e-02	k: 67821	n:840000
KS ci ratio: 2.679314e-01	ci left: 2.206629e-04	ci right 2.900029e-04	k: 213	n:840000
KIAA0182   840000 perm   400 sec   (2098 perm/sec)   p_kst 2.535714e-04   p_cons 8.073929e-02   p_joint 3.166667e-04

Joint ci ratio: 2.376467e-01	ci left: 2.819959e-04	ci right 3.591234e-04	k: 271	n:850000
Cons ci ratio: 1.434952e-02	ci left: 8.013119e-02	ci right 8.129049e-02	k: 68603	n:850000
KS ci ratio: 2.654617e-01	ci left: 2.224581e-04	ci right 2.916109e-04	k: 217	n:850000
KIAA0182   850000 perm   408 sec   (2083 perm/sec)   p_kst 2.552941e-04   p_cons 8.070941e-02   p_joint 3.188235e-04

Joint ci ratio: 2.363470e-01	ci left: 2.819981e-04	ci right 3.586427e-04	k: 274	n:860000
Cons ci ratio: 1.426385e-02	ci left: 8.015531e-02	ci right 8.130798e-02	k: 69428	n:860000
KS ci ratio: 2.642524e-01	ci left: 2.220426e-04	ci right 2.906997e-04	k: 219	n:860000
KIAA0182   860000 perm   416 sec   (2068 perm/sec)   p_kst 2.546512e-04   p_cons 8.073023e-02   p_joint 3.186047e-04

Joint ci ratio: 2.338097e-01	ci left: 2.852472e-04	ci right 3.618222e-04	k: 280	n:870000
Cons ci ratio: 1.418068e-02	ci left: 8.016858e-02	ci right 8.131467e-02	k: 70244	n:870000
KS ci ratio: 2.618821e-01	ci left: 2.237849e-04	ci right 2.922585e-04	k: 223	n:870000
KIAA0182   870000 perm   424 sec   (2054 perm/sec)   p_kst 2.563218e-04   p_cons 8.074023e-02   p_joint 3.218391e-04

Joint ci ratio: 2.329822e-01	ci left: 2.841456e-04	ci right 3.601160e-04	k: 282	n:880000
Cons ci ratio: 1.410219e-02	ci left: 8.014759e-02	ci right 8.128699e-02	k: 71030	n:880000
KS ci ratio: 2.607209e-01	ci left: 2.233658e-04	ci right 2.913586e-04	k: 225	n:880000
KIAA0182   880000 perm   431 sec   (2039 perm/sec)   p_kst 2.556818e-04   p_cons 8.071591e-02   p_joint 3.204545e-04

Joint ci ratio: 2.325720e-01	ci left: 2.820110e-04	ci right 3.572588e-04	k: 283	n:890000
Cons ci ratio: 1.402010e-02	ci left: 8.017861e-02	ci right 8.131176e-02	k: 71862	n:890000
KS ci ratio: 2.601462e-01	ci left: 2.219063e-04	ci right 2.892817e-04	k: 226	n:890000
KIAA0182   890000 perm   439 sec   (2025 perm/sec)   p_kst 2.539326e-04   p_cons 8.074382e-02   p_joint 3.179775e-04

Joint ci ratio: 2.325724e-01	ci left: 2.788775e-04	ci right 3.532894e-04	k: 283	n:900000
Cons ci ratio: 1.393797e-02	ci left: 8.022447e-02	ci right 8.135157e-02	k: 72708	n:900000
KS ci ratio: 2.601466e-01	ci left: 2.194406e-04	ci right 2.860675e-04	k: 226	n:900000
KIAA0182   900000 perm   448 sec   (2011 perm/sec)   p_kst 2.511111e-04   p_cons 8.078667e-02   p_joint 3.144444e-04

Joint ci ratio: 2.317579e-01	ci left: 2.778829e-04	ci right 3.517325e-04	k: 285	n:910000
Cons ci ratio: 1.385512e-02	ci left: 8.029233e-02	ci right 8.141363e-02	k: 73575	n:910000
KS ci ratio: 2.590082e-01	ci left: 2.190840e-04	ci right 2.852644e-04	k: 228	n:910000
KIAA0182   910000 perm   456 sec   (1997 perm/sec)   p_kst 2.505495e-04   p_cons 8.085165e-02   p_joint 3.131868e-04

Joint ci ratio: 2.301539e-01	ci left: 2.789587e-04	ci right 3.525082e-04	k: 289	n:920000
Cons ci ratio: 1.378179e-02	ci left: 8.027206e-02	ci right 8.138710e-02	k: 74362	n:920000
KS ci ratio: 2.573280e-01	ci left: 2.197526e-04	ci right 2.856351e-04	k: 231	n:920000
KIAA0182   920000 perm   464 sec   (1983 perm/sec)   p_kst 2.510870e-04   p_cons 8.082826e-02   p_joint 3.141304e-04

Joint ci ratio: 2.301543e-01	ci left: 2.759591e-04	ci right 3.487179e-04	k: 289	n:930000
Cons ci ratio: 1.370722e-02	ci left: 8.027797e-02	ci right 8.138701e-02	k: 75173	n:930000
KS ci ratio: 2.573284e-01	ci left: 2.173896e-04	ci right 2.825638e-04	k: 231	n:930000
KIAA0182   930000 perm   472 sec   (1970 perm/sec)   p_kst 2.483871e-04   p_cons 8.083118e-02   p_joint 3.107527e-04

Joint ci ratio: 2.289730e-01	ci left: 2.760313e-04	ci right 3.483828e-04	k: 292	n:940000
Cons ci ratio: 1.362985e-02	ci left: 8.032725e-02	ci right 8.143065e-02	k: 76025	n:940000
KS ci ratio: 2.556805e-01	ci left: 2.180633e-04	ci right 2.829541e-04	k: 234	n:940000
KIAA0182   940000 perm   481 sec   (1956 perm/sec)   p_kst 2.489362e-04   p_cons 8.087766e-02   p_joint 3.106383e-04

Joint ci ratio: 2.278098e-01	ci left: 2.761030e-04	ci right 3.480539e-04	k: 295	n:950000
Cons ci ratio: 1.356079e-02	ci left: 8.029890e-02	ci right 8.139628e-02	k: 76804	n:950000
KS ci ratio: 2.545995e-01	ci left: 2.177385e-04	ci right 2.822152e-04	k: 236	n:950000
KIAA0182   950000 perm   489 sec   (1943 perm/sec)   p_kst 2.484211e-04   p_cons 8.084632e-02   p_joint 3.105263e-04

Joint ci ratio: 2.270441e-01	ci left: 2.751915e-04	ci right 3.466302e-04	k: 297	n:960000
Cons ci ratio: 1.349087e-02	ci left: 8.029193e-02	ci right 8.138352e-02	k: 77603	n:960000
KS ci ratio: 2.535320e-01	ci left: 2.174211e-04	ci right 2.814912e-04	k: 238	n:960000
KIAA0182   960000 perm   498 sec   (1928 perm/sec)   p_kst 2.479167e-04   p_cons 8.083646e-02   p_joint 3.093750e-04

Joint ci ratio: 2.262862e-01	ci left: 2.742993e-04	ci right 3.452354e-04	k: 299	n:970000
Cons ci ratio: 1.342156e-02	ci left: 8.029026e-02	ci right 8.137617e-02	k: 78407	n:970000
KS ci ratio: 2.530035e-01	ci left: 2.161451e-04	ci right 2.796855e-04	k: 239	n:970000
KIAA0182   970000 perm   506 sec   (1915 perm/sec)   p_kst 2.463918e-04   p_cons 8.083196e-02   p_joint 3.082474e-04

Joint ci ratio: 2.236911e-01	ci left: 2.782407e-04	ci right 3.492573e-04	k: 306	n:980000
Cons ci ratio: 1.335550e-02	ci left: 8.026421e-02	ci right 8.134439e-02	k: 79187	n:980000
KS ci ratio: 2.493921e-01	ci left: 2.206328e-04	ci right 2.844230e-04	k: 246	n:980000
KIAA0182   980000 perm   515 sec   (1903 perm/sec)   p_kst 2.510204e-04   p_cons 8.080306e-02   p_joint 3.122449e-04

Joint ci ratio: 2.222478e-01	ci left: 2.792450e-04	ci right 3.499951e-04	k: 310	n:990000
Cons ci ratio: 1.328734e-02	ci left: 8.027295e-02	ci right 8.134769e-02	k: 80001	n:990000
KS ci ratio: 2.478911e-01	ci left: 2.212457e-04	ci right 2.847688e-04	k: 249	n:990000
KIAA0182   990000 perm   524 sec   (1891 perm/sec)   p_kst 2.515152e-04   p_cons 8.080909e-02   p_joint 3.131313e-04

Joint ci ratio: 2.197876e-01	ci left: 2.830651e-04	ci right 3.538819e-04	k: 317	n:1000000
Cons ci ratio: 1.322270e-02	ci left: 8.025361e-02	ci right 8.132282e-02	k: 80787	n:1000000
KS ci ratio: 2.449685e-01	ci left: 2.246628e-04	ci right 2.882908e-04	k: 255	n:1000000
KIAA0182   1000000 perm   532 sec   (1878 perm/sec)   p_kst 2.550000e-04   p_cons 8.078700e-02   p_joint 3.170000e-04

Joint ci ratio: 2.187582e-01	ci left: 2.830696e-04	ci right 3.535113e-04	k: 320	n:1010000
Cons ci ratio: 1.316172e-02	ci left: 8.020406e-02	ci right 8.126765e-02	k: 81542	n:1010000
KS ci ratio: 2.435456e-01	ci left: 2.252270e-04	ci right 2.885881e-04	k: 258	n:1010000
KIAA0182   1010000 perm   541 sec   (1866 perm/sec)   p_kst 2.554455e-04   p_cons 8.073465e-02   p_joint 3.168317e-04

Joint ci ratio: 2.174077e-01	ci left: 2.840018e-04	ci right 3.541809e-04	k: 324	n:1020000
Cons ci ratio: 1.309820e-02	ci left: 8.019362e-02	ci right 8.125190e-02	k: 82336	n:1020000
KS ci ratio: 2.416863e-01	ci left: 2.267021e-04	ci right 2.899183e-04	k: 262	n:1020000
KIAA0182   1020000 perm   550 sec   (1854 perm/sec)   p_kst 2.568627e-04   p_cons 8.072157e-02   p_joint 3.176471e-04

Joint ci ratio: 2.174081e-01	ci left: 2.812445e-04	ci right 3.507424e-04	k: 324	n:1030000
Cons ci ratio: 1.303499e-02	ci left: 8.019017e-02	ci right 8.124326e-02	k: 83137	n:1030000
KS ci ratio: 2.416866e-01	ci left: 2.245010e-04	ci right 2.871036e-04	k: 262	n:1030000
KIAA0182   1030000 perm   559 sec   (1842 perm/sec)   p_kst 2.543689e-04   p_cons 8.071553e-02   p_joint 3.145631e-04

Joint ci ratio: 2.164116e-01	ci left: 2.812681e-04	ci right 3.504109e-04	k: 327	n:1040000
Cons ci ratio: 1.296832e-02	ci left: 8.023665e-02	ci right 8.128492e-02	k: 83990	n:1040000
KS ci ratio: 2.407729e-01	ci left: 2.241492e-04	ci right 2.863821e-04	k: 264	n:1040000
KIAA0182   1040000 perm   569 sec   (1829 perm/sec)   p_kst 2.538462e-04   p_cons 8.075962e-02   p_joint 3.144231e-04

Joint ci ratio: 2.157549e-01	ci left: 2.803911e-04	ci right 3.490814e-04	k: 329	n:1050000
Cons ci ratio: 1.290821e-02	ci left: 8.021864e-02	ci right 8.126177e-02	k: 84776	n:1050000
KS ci ratio: 2.398695e-01	ci left: 2.238045e-04	ci right 2.856739e-04	k: 266	n:1050000
KIAA0182   1050000 perm   578 sec   (1817 perm/sec)   p_kst 2.533333e-04   p_cons 8.073905e-02   p_joint 3.133333e-04

Joint ci ratio: 4.064670e-01	ci left: 6.996752e-05	ci right 1.064422e-04	k: 92	n:1060000
Cons ci ratio: 1.280810e-02	ci left: 8.067317e-02	ci right 8.171402e-02	k: 86064	n:1060000
KS ci ratio: 2.389762e-01	ci left: 2.234668e-04	ci right 2.849786e-04	k: 268	n:1060000
KIAA0182   1060000 perm   587 sec   (1806 perm/sec)   p_kst 2.528302e-04   p_cons 8.119245e-02   p_joint 8.679245e-05

Joint ci ratio: 4.042992e-01	ci left: 7.015289e-05	ci right 1.064768e-04	k: 93	n:1070000
Cons ci ratio: 1.274698e-02	ci left: 8.068872e-02	ci right 8.172477e-02	k: 86890	n:1070000
KS ci ratio: 2.372188e-01	ci left: 2.248936e-04	ci right 2.862762e-04	k: 272	n:1070000
KIAA0182   1070000 perm   596 sec   (1794 perm/sec)   p_kst 2.542056e-04   p_cons 8.120561e-02   p_joint 8.691589e-05

Joint ci ratio: 4.000654e-01	ci left: 7.116785e-05	ci right 1.075291e-04	k: 95	n:1080000
Cons ci ratio: 1.268674e-02	ci left: 8.070399e-02	ci right 8.173530e-02	k: 87716	n:1080000
KS ci ratio: 2.354997e-01	ci left: 2.262957e-04	ci right 2.875481e-04	k: 276	n:1080000
KIAA0182   1080000 perm   606 sec   (1783 perm/sec)   p_kst 2.555556e-04   p_cons 8.121852e-02   p_joint 8.796296e-05

Joint ci ratio: 4.000655e-01	ci left: 7.051493e-05	ci right 1.065426e-04	k: 95	n:1090000
Cons ci ratio: 1.262943e-02	ci left: 8.069429e-02	ci right 8.172078e-02	k: 88515	n:1090000
KS ci ratio: 2.342346e-01	ci left: 2.268099e-04	ci right 2.878240e-04	k: 279	n:1090000
KIAA0182   1090000 perm   615 sec   (1772 perm/sec)   p_kst 2.559633e-04   p_cons 8.120642e-02   p_joint 8.715596e-05

Joint ci ratio: 4.000657e-01	ci left: 6.987388e-05	ci right 1.055741e-04	k: 95	n:1100000
Cons ci ratio: 1.257136e-02	ci left: 8.070290e-02	ci right 8.172476e-02	k: 89334	n:1100000
KS ci ratio: 2.321706e-01	ci left: 2.290280e-04	ci right 2.900179e-04	k: 284	n:1100000
KIAA0182   1100000 perm   624 sec   (1762 perm/sec)   p_kst 2.581818e-04   p_cons 8.121273e-02   p_joint 8.636364e-05

Joint ci ratio: 4.000658e-01	ci left: 6.924438e-05	ci right 1.046229e-04	k: 95	n:1110000
Cons ci ratio: 1.251590e-02	ci left: 8.068982e-02	ci right 8.170696e-02	k: 90129	n:1110000
KS ci ratio: 2.309581e-01	ci left: 2.295106e-04	ci right 2.902643e-04	k: 287	n:1110000
KIAA0182   1110000 perm   634 sec   (1751 perm/sec)   p_kst 2.585586e-04   p_cons 8.119730e-02   p_joint 8.558559e-05

Joint ci ratio: 3.939572e-01	ci left: 7.103728e-05	ci right 1.066335e-04	k: 98	n:1120000
Cons ci ratio: 1.246035e-02	ci left: 8.068677e-02	ci right 8.169933e-02	k: 90935	n:1120000
KS ci ratio: 2.297645e-01	ci left: 2.299854e-04	ci right 2.905055e-04	k: 290	n:1120000
KIAA0182   1120000 perm   643 sec   (1741 perm/sec)   p_kst 2.589286e-04   p_cons 8.119196e-02   p_joint 8.750000e-05

Joint ci ratio: 3.919825e-01	ci left: 7.120614e-05	ci right 1.066618e-04	k: 99	n:1130000
Cons ci ratio: 1.240354e-02	ci left: 8.070761e-02	ci right 8.171578e-02	k: 91768	n:1130000
KS ci ratio: 2.285892e-01	ci left: 2.304526e-04	ci right 2.907417e-04	k: 293	n:1130000
KIAA0182   1130000 perm   653 sec   (1730 perm/sec)   p_kst 2.592920e-04   p_cons 8.121062e-02   p_joint 8.761062e-05

Joint ci ratio: 3.919826e-01	ci left: 7.058152e-05	ci right 1.057261e-04	k: 99	n:1140000
Cons ci ratio: 1.235033e-02	ci left: 8.069398e-02	ci right 8.169763e-02	k: 92562	n:1140000
KS ci ratio: 2.278157e-01	ci left: 2.300852e-04	ci right 2.900458e-04	k: 295	n:1140000
KIAA0182   1140000 perm   663 sec   (1720 perm/sec)   p_kst 2.587719e-04   p_cons 8.119474e-02   p_joint 8.684211e-05

Joint ci ratio: 3.919828e-01	ci left: 6.996776e-05	ci right 1.048068e-04	k: 99	n:1150000
Cons ci ratio: 1.229580e-02	ci left: 8.070487e-02	ci right 8.170419e-02	k: 93384	n:1150000
KS ci ratio: 2.274320e-01	ci left: 2.289044e-04	ci right 2.884428e-04	k: 296	n:1150000
KIAA0182   1150000 perm   672 sec   (1710 perm/sec)   p_kst 2.573913e-04   p_cons 8.120348e-02   p_joint 8.608696e-05

Joint ci ratio: 3.919829e-01	ci left: 6.936459e-05	ci right 1.039033e-04	k: 99	n:1160000
Cons ci ratio: 1.224255e-02	ci left: 8.070871e-02	ci right 8.170372e-02	k: 94198	n:1160000
KS ci ratio: 2.259156e-01	ci left: 2.301836e-04	ci right 2.895999e-04	k: 300	n:1160000
KIAA0182   1160000 perm   682 sec   (1700 perm/sec)   p_kst 2.586207e-04   p_cons 8.120517e-02   p_joint 8.534483e-05

Joint ci ratio: 3.900376e-01	ci left: 6.954240e-05	ci right 1.039536e-04	k: 100	n:1170000
Cons ci ratio: 1.218970e-02	ci left: 8.071591e-02	ci right 8.170668e-02	k: 95016	n:1170000
KS ci ratio: 2.247981e-01	ci left: 2.306356e-04	ci right 2.898333e-04	k: 303	n:1170000
KIAA0182   1170000 perm   692 sec   (1690 perm/sec)   p_kst 2.589744e-04   p_cons 8.121026e-02   p_joint 8.547009e-05

Joint ci ratio: 3.862321e-01	ci left: 7.048258e-05	ci right 1.049321e-04	k: 102	n:1180000
Cons ci ratio: 1.213719e-02	ci left: 8.072721e-02	ci right 8.171383e-02	k: 95839	n:1180000
KS ci ratio: 2.226117e-01	ci left: 2.334809e-04	ci right 2.927462e-04	k: 309	n:1180000
KIAA0182   1180000 perm   702 sec   (1681 perm/sec)   p_kst 2.618644e-04   p_cons 8.121949e-02   p_joint 8.644068e-05

Joint ci ratio: 3.862322e-01	ci left: 6.989028e-05	ci right 1.040503e-04	k: 102	n:1190000
Cons ci ratio: 1.208631e-02	ci left: 8.072661e-02	ci right 8.170905e-02	k: 96648	n:1190000
KS ci ratio: 2.226119e-01	ci left: 2.315189e-04	ci right 2.902862e-04	k: 309	n:1190000
KIAA0182   1190000 perm   712 sec   (1671 perm/sec)   p_kst 2.596639e-04   p_cons 8.121681e-02   p_joint 8.571429e-05

Joint ci ratio: 3.843708e-01	ci left: 7.006047e-05	ci right 1.040969e-04	k: 103	n:1200000
Cons ci ratio: 1.203720e-02	ci left: 8.071189e-02	ci right 8.169013e-02	k: 97440	n:1200000
KS ci ratio: 2.208379e-01	ci left: 2.335248e-04	ci right 2.922648e-04	k: 314	n:1200000
KIAA0182   1200000 perm   722 sec   (1662 perm/sec)   p_kst 2.616667e-04   p_cons 8.120000e-02   p_joint 8.583333e-05

Joint ci ratio: 3.843709e-01	ci left: 6.948146e-05	ci right 1.032366e-04	k: 103	n:1210000
Cons ci ratio: 1.198516e-02	ci left: 8.074111e-02	ci right 8.171544e-02	k: 98285	n:1210000
KS ci ratio: 2.194488e-01	ci left: 2.347184e-04	ci right 2.933372e-04	k: 318	n:1210000
KIAA0182   1210000 perm   732 sec   (1652 perm/sec)   p_kst 2.628099e-04   p_cons 8.122727e-02   p_joint 8.512397e-05

Joint ci ratio: 3.825362e-01	ci left: 6.965259e-05	ci right 1.032887e-04	k: 104	n:1220000
Cons ci ratio: 1.193452e-02	ci left: 8.076086e-02	ci right 8.173129e-02	k: 99119	n:1220000
KS ci ratio: 2.187642e-01	ci left: 2.343439e-04	ci right 2.926619e-04	k: 320	n:1220000
KIAA0182   1220000 perm   743 sec   (1643 perm/sec)   p_kst 2.622951e-04   p_cons 8.124508e-02   p_joint 8.524590e-05

Joint ci ratio: 3.771855e-01	ci left: 7.129247e-05	ci right 1.051198e-04	k: 107	n:1230000
Cons ci ratio: 1.188678e-02	ci left: 8.075193e-02	ci right 8.171834e-02	k: 99918	n:1230000
KS ci ratio: 2.174137e-01	ci left: 2.355131e-04	ci right 2.937119e-04	k: 324	n:1230000
KIAA0182   1230000 perm   753 sec   (1634 perm/sec)   p_kst 2.634146e-04   p_cons 8.123415e-02   p_joint 8.699187e-05

Joint ci ratio: 3.771856e-01	ci left: 7.071752e-05	ci right 1.042721e-04	k: 107	n:1240000
Cons ci ratio: 1.183845e-02	ci left: 8.075762e-02	ci right 8.172014e-02	k: 100735	n:1240000
KS ci ratio: 2.174139e-01	ci left: 2.336137e-04	ci right 2.913433e-04	k: 324	n:1240000
KIAA0182   1240000 perm   763 sec   (1625 perm/sec)   p_kst 2.612903e-04   p_cons 8.123790e-02   p_joint 8.629032e-05

Joint ci ratio: 3.771857e-01	ci left: 7.015178e-05	ci right 1.034379e-04	k: 107	n:1250000
Cons ci ratio: 1.179191e-02	ci left: 8.074807e-02	ci right 8.170667e-02	k: 101533	n:1250000
KS ci ratio: 2.170803e-01	ci left: 2.325013e-04	ci right 2.898561e-04	k: 325	n:1250000
KIAA0182   1250000 perm   774 sec   (1616 perm/sec)   p_kst 2.600000e-04   p_cons 8.122640e-02   p_joint 8.560000e-05

Joint ci ratio: 3.720534e-01	ci left: 7.175182e-05	ci right 1.052211e-04	k: 110	n:1260000
Cons ci ratio: 1.174298e-02	ci left: 8.077588e-02	ci right 8.173081e-02	k: 102378	n:1260000
KS ci ratio: 2.154343e-01	ci left: 2.344094e-04	ci right 2.917384e-04	k: 330	n:1260000
KIAA0182   1260000 perm   784 sec   (1607 perm/sec)   p_kst 2.619048e-04   p_cons 8.125238e-02   p_joint 8.730159e-05

Joint ci ratio: 3.687460e-01	ci left: 7.261507e-05	ci right 1.061133e-04	k: 112	n:1270000
Cons ci ratio: 1.169570e-02	ci left: 8.078991e-02	ci right 8.174113e-02	k: 103206	n:1270000
KS ci ratio: 2.151097e-01	ci left: 2.333086e-04	ci right 2.902711e-04	k: 331	n:1270000
KIAA0182   1270000 perm   795 sec   (1598 perm/sec)   p_kst 2.606299e-04   p_cons 8.126457e-02   p_joint 8.818898e-05

Joint ci ratio: 3.655253e-01	ci left: 7.346612e-05	ci right 1.069903e-04	k: 114	n:1280000
Cons ci ratio: 1.164948e-02	ci left: 8.079750e-02	ci right 8.174502e-02	k: 104026	n:1280000
KS ci ratio: 2.141444e-01	ci left: 2.337036e-04	ci right 2.904729e-04	k: 334	n:1280000
KIAA0182   1280000 perm   805 sec   (1589 perm/sec)   p_kst 2.609375e-04   p_cons 8.127031e-02   p_joint 8.906250e-05

Joint ci ratio: 3.639464e-01	ci left: 7.360077e-05	ci right 1.070069e-04	k: 115	n:1290000
Cons ci ratio: 1.160651e-02	ci left: 8.077018e-02	ci right 8.171387e-02	k: 104801	n:1290000
KS ci ratio: 2.125637e-01	ci left: 2.355609e-04	ci right 2.923039e-04	k: 339	n:1290000
KIAA0182   1290000 perm   816 sec   (1581 perm/sec)   p_kst 2.627907e-04   p_cons 8.124109e-02   p_joint 8.914729e-05

Joint ci ratio: 3.639465e-01	ci left: 7.303461e-05	ci right 1.061837e-04	k: 115	n:1300000
Cons ci ratio: 1.156163e-02	ci left: 8.077398e-02	ci right 8.171404e-02	k: 105616	n:1300000
KS ci ratio: 2.125640e-01	ci left: 2.337489e-04	ci right 2.900554e-04	k: 339	n:1300000
KIAA0182   1300000 perm   827 sec   (1573 perm/sec)   p_kst 2.607692e-04   p_cons 8.124308e-02   p_joint 8.846154e-05

Joint ci ratio: 3.623878e-01	ci left: 7.317080e-05	ci right 1.062059e-04	k: 116	n:1310000
Cons ci ratio: 1.151680e-02	ci left: 8.078382e-02	ci right 8.172032e-02	k: 106439	n:1310000
KS ci ratio: 2.119416e-01	ci left: 2.334101e-04	ci right 2.894490e-04	k: 341	n:1310000
KIAA0182   1310000 perm   837 sec   (1564 perm/sec)   p_kst 2.603053e-04   p_cons 8.125115e-02   p_joint 8.854962e-05

Joint ci ratio: 3.623879e-01	ci left: 7.261647e-05	ci right 1.054013e-04	k: 116	n:1320000
Cons ci ratio: 1.147108e-02	ci left: 8.081165e-02	ci right 8.174473e-02	k: 107286	n:1320000
KS ci ratio: 2.110180e-01	ci left: 2.337942e-04	ci right 2.896491e-04	k: 344	n:1320000
KIAA0182   1320000 perm   849 sec   (1556 perm/sec)   p_kst 2.606061e-04   p_cons 8.127727e-02   p_joint 8.787879e-05

Joint ci ratio: 3.593296e-01	ci left: 7.343792e-05	ci right 1.062483e-04	k: 118	n:1330000
Cons ci ratio: 1.142660e-02	ci left: 8.083007e-02	ci right 8.175972e-02	k: 108121	n:1330000
KS ci ratio: 2.101065e-01	ci left: 2.341730e-04	ci right 2.898457e-04	k: 347	n:1330000
KIAA0182   1330000 perm   860 sec   (1547 perm/sec)   p_kst 2.609023e-04   p_cons 8.129398e-02   p_joint 8.872180e-05

Joint ci ratio: 3.563474e-01	ci left: 7.424825e-05	ci right 1.070816e-04	k: 120	n:1340000
Cons ci ratio: 1.138456e-02	ci left: 8.082292e-02	ci right 8.174904e-02	k: 108922	n:1340000
KS ci ratio: 2.092066e-01	ci left: 2.345468e-04	ci right 2.900389e-04	k: 350	n:1340000
KIAA0182   1340000 perm   871 sec   (1539 perm/sec)   p_kst 2.611940e-04   p_cons 8.128507e-02   p_joint 8.955224e-05

Joint ci ratio: 3.563475e-01	ci left: 7.369826e-05	ci right 1.062884e-04	k: 120	n:1350000
Cons ci ratio: 1.134507e-02	ci left: 8.078854e-02	ci right 8.171104e-02	k: 109686	n:1350000
KS ci ratio: 2.092068e-01	ci left: 2.328093e-04	ci right 2.878905e-04	k: 350	n:1350000
KIAA0182   1350000 perm   882 sec   (1531 perm/sec)   p_kst 2.592593e-04   p_cons 8.124889e-02   p_joint 8.888889e-05

Joint ci ratio: 3.563477e-01	ci left: 7.315635e-05	ci right 1.055069e-04	k: 120	n:1360000
Cons ci ratio: 1.130509e-02	ci left: 8.076640e-02	ci right 8.168538e-02	k: 110466	n:1360000
KS ci ratio: 2.080248e-01	ci left: 2.338851e-04	ci right 2.888682e-04	k: 354	n:1360000
KIAA0182   1360000 perm   893 sec   (1523 perm/sec)   p_kst 2.602941e-04   p_cons 8.122500e-02   p_joint 8.823529e-05

Joint ci ratio: 3.548842e-01	ci left: 7.328709e-05	ci right 1.055316e-04	k: 121	n:1370000
Cons ci ratio: 1.126421e-02	ci left: 8.076207e-02	ci right 8.167766e-02	k: 111270	n:1370000
KS ci ratio: 2.071513e-01	ci left: 2.342538e-04	ci right 2.890631e-04	k: 357	n:1370000
KIAA0182   1370000 perm   904 sec   (1515 perm/sec)   p_kst 2.605839e-04   p_cons 8.121898e-02   p_joint 8.832117e-05

Joint ci ratio: 3.534386e-01	ci left: 7.341619e-05	ci right 1.055557e-04	k: 122	n:1380000
Cons ci ratio: 1.122355e-02	ci left: 8.076070e-02	ci right 8.167294e-02	k: 112078	n:1380000
KS ci ratio: 2.057195e-01	ci left: 2.359923e-04	ci right 2.907787e-04	k: 362	n:1380000
KIAA0182   1380000 perm   916 sec   (1507 perm/sec)   p_kst 2.623188e-04   p_cons 8.121594e-02   p_joint 8.840580e-05

Joint ci ratio: 3.520106e-01	ci left: 7.354371e-05	ci right 1.055793e-04	k: 123	n:1390000
Cons ci ratio: 1.118382e-02	ci left: 8.075289e-02	ci right 8.166180e-02	k: 112877	n:1390000
KS ci ratio: 2.051552e-01	ci left: 2.356593e-04	ci right 2.901995e-04	k: 364	n:1390000
KIAA0182   1390000 perm   927 sec   (1499 perm/sec)   p_kst 2.618705e-04   p_cons 8.120647e-02   p_joint 8.848921e-05

Joint ci ratio: 3.520107e-01	ci left: 7.301839e-05	ci right 1.048251e-04	k: 123	n:1400000
Cons ci ratio: 1.114413e-02	ci left: 8.075019e-02	ci right 8.165582e-02	k: 113683	n:1400000
KS ci ratio: 2.037641e-01	ci left: 2.373646e-04	ci right 2.918806e-04	k: 369	n:1400000
KIAA0182   1400000 perm   939 sec   (1491 perm/sec)   p_kst 2.635714e-04   p_cons 8.120214e-02   p_joint 8.785714e-05

Joint ci ratio: 3.505998e-01	ci left: 7.314717e-05	ci right 1.048532e-04	k: 124	n:1410000
Cons ci ratio: 1.110465e-02	ci left: 8.075037e-02	ci right 8.165277e-02	k: 114493	n:1410000
KS ci ratio: 2.032156e-01	ci left: 2.370273e-04	ci right 2.913012e-04	k: 371	n:1410000
KIAA0182   1410000 perm   951 sec   (1483 perm/sec)   p_kst 2.631206e-04   p_cons 8.120071e-02   p_joint 8.794326e-05

Joint ci ratio: 3.478281e-01	ci left: 7.391698e-05	ci right 1.056463e-04	k: 126	n:1420000
Cons ci ratio: 1.106819e-02	ci left: 8.071542e-02	ci right 8.161446e-02	k: 115253	n:1420000
KS ci ratio: 2.026716e-01	ci left: 2.366950e-04	ci right 2.907297e-04	k: 373	n:1420000
KIAA0182   1420000 perm   962 sec   (1476 perm/sec)   p_kst 2.626761e-04   p_cons 8.116408e-02   p_joint 8.873239e-05

Joint ci ratio: 3.464667e-01	ci left: 7.403841e-05	ci right 1.056676e-04	k: 127	n:1430000
Cons ci ratio: 1.102703e-02	ci left: 8.074933e-02	ci right 8.164537e-02	k: 116111	n:1430000
KS ci ratio: 2.015963e-01	ci left: 2.376955e-04	ci right 2.916352e-04	k: 377	n:1430000
KIAA0182   1430000 perm   974 sec   (1469 perm/sec)   p_kst 2.636364e-04   p_cons 8.119650e-02   p_joint 8.881119e-05

Joint ci ratio: 3.437911e-01	ci left: 7.479277e-05	ci right 1.064426e-04	k: 129	n:1440000
Cons ci ratio: 1.098862e-02	ci left: 8.075160e-02	ci right 8.164453e-02	k: 116924	n:1440000
KS ci ratio: 2.005380e-01	ci left: 2.386827e-04	ci right 2.925274e-04	k: 381	n:1440000
KIAA0182   1440000 perm   986 sec   (1461 perm/sec)   p_kst 2.645833e-04   p_cons 8.119722e-02   p_joint 8.958333e-05

Joint ci ratio: 3.398914e-01	ci left: 7.616834e-05	ci right 1.079544e-04	k: 132	n:1450000
Cons ci ratio: 1.094996e-02	ci left: 8.076279e-02	ci right 8.165268e-02	k: 117750	n:1450000
KS ci ratio: 1.994961e-01	ci left: 2.396571e-04	ci right 2.934065e-04	k: 385	n:1450000
KIAA0182   1450000 perm   997 sec   (1454 perm/sec)   p_kst 2.655172e-04   p_cons 8.120690e-02   p_joint 9.103448e-05

Joint ci ratio: 3.386208e-01	ci left: 7.627322e-05	ci right 1.079580e-04	k: 133	n:1460000
Cons ci ratio: 1.091300e-02	ci left: 8.075606e-02	ci right 8.164286e-02	k: 118550	n:1460000
KS ci ratio: 1.992383e-01	ci left: 2.386664e-04	ci right 2.921160e-04	k: 386	n:1460000
KIAA0182   1460000 perm   1010 sec   (1446 perm/sec)   p_kst 2.643836e-04   p_cons 8.119863e-02   p_joint 9.109589e-05

Joint ci ratio: 3.386209e-01	ci left: 7.575436e-05	ci right 1.072236e-04	k: 133	n:1470000
Cons ci ratio: 1.087408e-02	ci left: 8.078133e-02	ci right 8.166522e-02	k: 119397	n:1470000
KS ci ratio: 1.987255e-01	ci left: 2.383355e-04	ci right 2.915571e-04	k: 388	n:1470000
KIAA0182   1470000 perm   1021 sec   (1439 perm/sec)   p_kst 2.639456e-04   p_cons 8.122245e-02   p_joint 9.047619e-05

Joint ci ratio: 3.386210e-01	ci left: 7.524250e-05	ci right 1.064991e-04	k: 133	n:1480000
Cons ci ratio: 1.083758e-02	ci left: 8.077863e-02	ci right 8.165950e-02	k: 120203	n:1480000
KS ci ratio: 1.979636e-01	ci left: 2.386515e-04	ci right 2.917146e-04	k: 391	n:1480000
KIAA0182   1480000 perm   1034 sec   (1432 perm/sec)   p_kst 2.641892e-04   p_cons 8.121824e-02   p_joint 8.986486e-05

Joint ci ratio: 3.386211e-01	ci left: 7.473751e-05	ci right 1.057844e-04	k: 133	n:1490000
Cons ci ratio: 1.080117e-02	ci left: 8.077998e-02	ci right 8.165789e-02	k: 121015	n:1490000
KS ci ratio: 1.967129e-01	ci left: 2.402398e-04	ci right 2.932781e-04	k: 396	n:1490000
KIAA0182   1490000 perm   1046 sec   (1425 perm/sec)   p_kst 2.657718e-04   p_cons 8.121812e-02   p_joint 8.926174e-05

Joint ci ratio: 3.348928e-01	ci left: 7.607017e-05	ci right 1.072476e-04	k: 136	n:1500000
Cons ci ratio: 1.076540e-02	ci left: 8.077733e-02	ci right 8.165229e-02	k: 121821	n:1500000
KS ci ratio: 1.952428e-01	ci left: 2.424420e-04	ci right 2.955189e-04	k: 402	n:1500000
KIAA0182   1500000 perm   1058 sec   (1418 perm/sec)   p_kst 2.680000e-04   p_cons 8.121400e-02   p_joint 9.066667e-05

Joint ci ratio: 3.348929e-01	ci left: 7.556639e-05	ci right 1.065374e-04	k: 136	n:1510000
Cons ci ratio: 1.072860e-02	ci left: 8.079388e-02	ci right 8.166601e-02	k: 122656	n:1510000
KS ci ratio: 1.940426e-01	ci left: 2.439863e-04	ci right 2.970342e-04	k: 407	n:1510000
KIAA0182   1510000 perm   1070 sec   (1411 perm/sec)   p_kst 2.695364e-04   p_cons 8.122914e-02   p_joint 9.006623e-05

Joint ci ratio: 3.336773e-01	ci left: 7.567193e-05	ci right 1.065494e-04	k: 137	n:1520000
Cons ci ratio: 1.069233e-02	ci left: 8.080825e-02	ci right 8.167756e-02	k: 123488	n:1520000
KS ci ratio: 1.938054e-01	ci left: 2.430071e-04	ci right 2.957698e-04	k: 408	n:1520000
KIAA0182   1520000 perm   1083 sec   (1404 perm/sec)   p_kst 2.684211e-04   p_cons 8.124211e-02   p_joint 9.013158e-05

Joint ci ratio: 3.312852e-01	ci left: 7.637542e-05	ci right 1.072689e-04	k: 139	n:1530000
Cons ci ratio: 1.065609e-02	ci left: 8.082700e-02	ci right 8.169355e-02	k: 124327	n:1530000
KS ci ratio: 1.930985e-01	ci left: 2.432846e-04	ci right 2.958923e-04	k: 411	n:1530000
KIAA0182   1530000 perm   1095 sec   (1397 perm/sec)   p_kst 2.686275e-04   p_cons 8.125948e-02   p_joint 9.084967e-05

Joint ci ratio: 3.301083e-01	ci left: 7.647492e-05	ci right 1.072754e-04	k: 140	n:1540000
Cons ci ratio: 1.062146e-02	ci left: 8.082801e-02	ci right 8.169174e-02	k: 125139	n:1540000
KS ci ratio: 1.928647e-01	ci left: 2.423228e-04	ci right 2.946517e-04	k: 412	n:1540000
KIAA0182   1540000 perm   1108 sec   (1390 perm/sec)   p_kst 2.675325e-04   p_cons 8.125909e-02   p_joint 9.090909e-05

Joint ci ratio: 3.301084e-01	ci left: 7.598153e-05	ci right 1.065833e-04	k: 140	n:1550000
Cons ci ratio: 1.058790e-02	ci left: 8.081873e-02	ci right 8.167961e-02	k: 125935	n:1550000
KS ci ratio: 1.919373e-01	ci left: 2.432158e-04	ci right 2.954555e-04	k: 416	n:1550000
KIAA0182   1550000 perm   1120 sec   (1384 perm/sec)   p_kst 2.683871e-04   p_cons 8.124839e-02   p_joint 9.032258e-05

Joint ci ratio: 3.301085e-01	ci left: 7.549447e-05	ci right 1.059001e-04	k: 140	n:1560000
Cons ci ratio: 1.055643e-02	ci left: 8.078462e-02	ci right 8.164257e-02	k: 126692	n:1560000
KS ci ratio: 1.917077e-01	ci left: 2.422669e-04	ci right 2.942333e-04	k: 417	n:1560000
KIAA0182   1560000 perm   1133 sec   (1376 perm/sec)   p_kst 2.673077e-04   p_cons 8.121282e-02   p_joint 8.974359e-05

Joint ci ratio: 3.301086e-01	ci left: 7.501361e-05	ci right 1.052256e-04	k: 140	n:1570000
Cons ci ratio: 1.052254e-02	ci left: 8.078908e-02	ci right 8.164431e-02	k: 127509	n:1570000
KS ci ratio: 1.910234e-01	ci left: 2.425431e-04	ci right 2.943615e-04	k: 420	n:1570000
KIAA0182   1570000 perm   1146 sec   (1370 perm/sec)   p_kst 2.675159e-04   p_cons 8.121592e-02   p_joint 8.917197e-05

Joint ci ratio: 3.289442e-01	ci left: 7.511940e-05	ci right 1.052447e-04	k: 141	n:1580000
Cons ci ratio: 1.048870e-02	ci left: 8.079728e-02	ci right 8.164982e-02	k: 128332	n:1580000
KS ci ratio: 1.907971e-01	ci left: 2.416107e-04	ci right 2.931616e-04	k: 421	n:1580000
KIAA0182   1580000 perm   1159 sec   (1363 perm/sec)   p_kst 2.664557e-04   p_cons 8.122278e-02   p_joint 8.924051e-05

Joint ci ratio: 3.255233e-01	ci left: 7.637877e-05	ci right 1.066240e-04	k: 144	n:1590000
Cons ci ratio: 1.045444e-02	ci left: 8.081605e-02	ci right 8.166598e-02	k: 129172	n:1590000
KS ci ratio: 1.896766e-01	ci left: 2.430860e-04	ci right 2.946120e-04	k: 426	n:1590000
KIAA0182   1590000 perm   1172 sec   (1357 perm/sec)   p_kst 2.679245e-04   p_cons 8.124025e-02   p_joint 9.056604e-05

Joint ci ratio: 3.255234e-01	ci left: 7.590140e-05	ci right 1.059576e-04	k: 144	n:1600000
Cons ci ratio: 1.042152e-02	ci left: 8.082024e-02	ci right 8.166753e-02	k: 129989	n:1600000
KS ci ratio: 1.896767e-01	ci left: 2.415667e-04	ci right 2.927707e-04	k: 426	n:1600000
KIAA0182   1600000 perm   1185 sec   (1350 perm/sec)   p_kst 2.662500e-04   p_cons 8.124312e-02   p_joint 9.000000e-05

Joint ci ratio: 3.255235e-01	ci left: 7.542996e-05	ci right 1.052995e-04	k: 144	n:1610000
Cons ci ratio: 1.039025e-02	ci left: 8.080517e-02	ci right 8.164975e-02	k: 130775	n:1610000
KS ci ratio: 1.890139e-01	ci left: 2.418413e-04	ci right 2.929038e-04	k: 429	n:1610000
KIAA0182   1610000 perm   1198 sec   (1344 perm/sec)   p_kst 2.664596e-04   p_cons 8.122671e-02   p_joint 8.944099e-05

Joint ci ratio: 3.244068e-01	ci left: 7.553128e-05	ci right 1.053170e-04	k: 145	n:1620000
Cons ci ratio: 1.035780e-02	ci left: 8.081124e-02	ci right 8.165322e-02	k: 131595	n:1620000
KS ci ratio: 1.879243e-01	ci left: 2.432893e-04	ci right 2.943276e-04	k: 434	n:1620000
KIAA0182   1620000 perm   1211 sec   (1338 perm/sec)   p_kst 2.679012e-04   p_cons 8.123148e-02   p_joint 8.950617e-05

Joint ci ratio: 3.244069e-01	ci left: 7.506789e-05	ci right 1.046708e-04	k: 145	n:1630000
Cons ci ratio: 1.032379e-02	ci left: 8.084416e-02	ci right 8.168371e-02	k: 132459	n:1630000
KS ci ratio: 1.879245e-01	ci left: 2.417967e-04	ci right 2.925220e-04	k: 434	n:1630000
KIAA0182   1630000 perm   1225 sec   (1331 perm/sec)   p_kst 2.662577e-04   p_cons 8.126319e-02   p_joint 8.895706e-05

Joint ci ratio: 3.244070e-01	ci left: 7.461016e-05	ci right 1.040326e-04	k: 145	n:1640000
Cons ci ratio: 1.029233e-02	ci left: 8.084445e-02	ci right 8.168142e-02	k: 133270	n:1640000
KS ci ratio: 1.870663e-01	ci left: 2.426469e-04	ci right 2.932916e-04	k: 438	n:1640000
KIAA0182   1640000 perm   1238 sec   (1325 perm/sec)   p_kst 2.670732e-04   p_cons 8.126220e-02   p_joint 8.841463e-05

Joint ci ratio: 3.233017e-01	ci left: 7.471477e-05	ci right 1.040573e-04	k: 146	n:1650000
Cons ci ratio: 1.026204e-02	ci left: 8.083204e-02	ci right 8.166640e-02	k: 134060	n:1650000
KS ci ratio: 1.864304e-01	ci left: 2.429095e-04	ci right 2.934172e-04	k: 441	n:1650000
KIAA0182   1650000 perm   1251 sec   (1319 perm/sec)   p_kst 2.672727e-04   p_cons 8.124848e-02   p_joint 8.848485e-05

Joint ci ratio: 2.654784e-01	ci left: 1.139084e-04	ci right 1.493201e-04	k: 217	n:1660000
Cons ci ratio: 1.023098e-02	ci left: 8.083480e-02	ci right 8.166666e-02	k: 134875	n:1660000
KS ci ratio: 1.858009e-01	ci left: 2.431692e-04	ci right 2.935410e-04	k: 444	n:1660000
KIAA0182   1660000 perm   1265 sec   (1313 perm/sec)   p_kst 2.674699e-04   p_cons 8.125000e-02   p_joint 1.307229e-04

Joint ci ratio: 2.648716e-01	ci left: 1.137853e-04	ci right 1.490645e-04	k: 218	n:1670000
Cons ci ratio: 1.020085e-02	ci left: 8.082798e-02	ci right 8.165730e-02	k: 135674	n:1670000
KS ci ratio: 1.849713e-01	ci left: 2.439972e-04	ci right 2.942895e-04	k: 448	n:1670000
KIAA0182   1670000 perm   1278 sec   (1307 perm/sec)   p_kst 2.682635e-04   p_cons 8.124192e-02   p_joint 1.305389e-04

Joint ci ratio: 2.636703e-01	ci left: 1.142196e-04	ci right 1.494464e-04	k: 220	n:1680000
Cons ci ratio: 1.017087e-02	ci left: 8.082303e-02	ci right 8.164985e-02	k: 136476	n:1680000
KS ci ratio: 1.843564e-01	ci left: 2.442480e-04	ci right 2.944059e-04	k: 451	n:1680000
KIAA0182   1680000 perm   1292 sec   (1301 perm/sec)   p_kst 2.684524e-04   p_cons 8.123571e-02   p_joint 1.309524e-04

Joint ci ratio: 2.636704e-01	ci left: 1.135438e-04	ci right 1.485621e-04	k: 220	n:1690000
Cons ci ratio: 1.014260e-02	ci left: 8.079688e-02	ci right 8.162112e-02	k: 137242	n:1690000
KS ci ratio: 1.843566e-01	ci left: 2.428027e-04	ci right 2.926639e-04	k: 451	n:1690000
KIAA0182   1690000 perm   1305 sec   (1295 perm/sec)   p_kst 2.668639e-04   p_cons 8.120828e-02   p_joint 1.301775e-04

Joint ci ratio: 2.350867e-01	ci left: 1.443171e-04	ci right 1.833015e-04	k: 277	n:1700000
Cons ci ratio: 1.011177e-02	ci left: 8.081213e-02	ci right 8.163401e-02	k: 138078	n:1700000
KS ci ratio: 1.835461e-01	ci left: 2.436191e-04	ci right 2.934035e-04	k: 455	n:1700000
KIAA0182   1700000 perm   1319 sec   (1289 perm/sec)   p_kst 2.676471e-04   p_cons 8.122235e-02   p_joint 1.629412e-04

Joint ci ratio: 2.350868e-01	ci left: 1.434732e-04	ci right 1.822296e-04	k: 277	n:1710000
Cons ci ratio: 1.008193e-02	ci left: 8.081670e-02	ci right 8.163618e-02	k: 138896	n:1710000
KS ci ratio: 1.833453e-01	ci left: 2.427523e-04	ci right 2.922993e-04	k: 456	n:1710000
KIAA0182   1710000 perm   1333 sec   (1283 perm/sec)   p_kst 2.666667e-04   p_cons 8.122573e-02   p_joint 1.619883e-04

Joint ci ratio: 2.342457e-01	ci left: 1.437335e-04	ci right 1.824011e-04	k: 279	n:1720000
Cons ci ratio: 1.005146e-02	ci left: 8.083456e-02	ci right 8.165173e-02	k: 139737	n:1720000
KS ci ratio: 1.833455e-01	ci left: 2.413410e-04	ci right 2.905999e-04	k: 456	n:1720000
KIAA0182   1720000 perm   1347 sec   (1277 perm/sec)   p_kst 2.651163e-04   p_cons 8.124244e-02   p_joint 1.622093e-04

Joint ci ratio: 2.334135e-01	ci left: 1.439910e-04	ci right 1.825705e-04	k: 281	n:1730000
Cons ci ratio: 1.002145e-02	ci left: 8.084934e-02	ci right 8.166421e-02	k: 140573	n:1730000
KS ci ratio: 1.825482e-01	ci left: 2.421522e-04	ci right 2.913380e-04	k: 460	n:1730000
KIAA0182   1730000 perm   1360 sec   (1272 perm/sec)   p_kst 2.658960e-04   p_cons 8.125607e-02   p_joint 1.624277e-04

Joint ci ratio: 2.325902e-01	ci left: 1.442458e-04	ci right 1.827376e-04	k: 283	n:1740000
Cons ci ratio: 9.992633e-03	ci left: 8.085018e-02	ci right 8.166271e-02	k: 141385	n:1740000
KS ci ratio: 1.823506e-01	ci left: 2.413090e-04	ci right 2.902646e-04	k: 461	n:1740000
KIAA0182   1740000 perm   1374 sec   (1266 perm/sec)   p_kst 2.649425e-04   p_cons 8.125575e-02   p_joint 1.626437e-04

Joint ci ratio: 2.313712e-01	ci left: 1.450362e-04	ci right 1.835071e-04	k: 286	n:1750000
Cons ci ratio: 9.964101e-03	ci left: 8.085045e-02	ci right 8.166065e-02	k: 142196	n:1750000
KS ci ratio: 1.811778e-01	ci left: 2.432027e-04	ci right 2.921903e-04	k: 467	n:1750000
KIAA0182   1750000 perm   1388 sec   (1261 perm/sec)   p_kst 2.668571e-04   p_cons 8.125486e-02   p_joint 1.634286e-04

Joint ci ratio: 2.309692e-01	ci left: 1.447474e-04	ci right 1.830655e-04	k: 287	n:1760000
Cons ci ratio: 9.934301e-03	ci left: 8.087340e-02	ci right 8.168139e-02	k: 143047	n:1760000
KS ci ratio: 1.809846e-01	ci left: 2.423633e-04	ci right 2.911241e-04	k: 468	n:1760000
KIAA0182   1760000 perm   1402 sec   (1255 perm/sec)   p_kst 2.659091e-04   p_cons 8.127670e-02   p_joint 1.630682e-04

Joint ci ratio: 2.305693e-01	ci left: 1.444619e-04	ci right 1.826288e-04	k: 288	n:1770000
Cons ci ratio: 9.906077e-03	ci left: 8.087636e-02	ci right 8.168207e-02	k: 143863	n:1770000
KS ci ratio: 1.804085e-01	ci left: 2.426122e-04	ci right 2.912508e-04	k: 471	n:1770000
KIAA0182   1770000 perm   1416 sec   (1250 perm/sec)   p_kst 2.661017e-04   p_cons 8.127853e-02   p_joint 1.627119e-04

Joint ci ratio: 2.297756e-01	ci left: 1.447092e-04	ci right 1.827911e-04	k: 290	n:1780000
Cons ci ratio: 9.878204e-03	ci left: 8.087761e-02	ci right 8.168105e-02	k: 144676	n:1780000
KS ci ratio: 1.794604e-01	ci left: 2.439317e-04	ci right 2.925499e-04	k: 476	n:1780000
KIAA0182   1780000 perm   1430 sec   (1244 perm/sec)   p_kst 2.674157e-04   p_cons 8.127865e-02   p_joint 1.629213e-04

Joint ci ratio: 2.293819e-01	ci left: 1.444273e-04	ci right 1.823606e-04	k: 291	n:1790000
Cons ci ratio: 9.852223e-03	ci left: 8.085377e-02	ci right 8.165485e-02	k: 145444	n:1790000
KS ci ratio: 1.792726e-01	ci left: 2.431026e-04	ci right 2.914993e-04	k: 477	n:1790000
KIAA0182   1790000 perm   1445 sec   (1239 perm/sec)   p_kst 2.664804e-04   p_cons 8.125363e-02   p_joint 1.625698e-04

Joint ci ratio: 2.286003e-01	ci left: 1.446723e-04	ci right 1.825222e-04	k: 293	n:1800000
Cons ci ratio: 9.824619e-03	ci left: 8.085791e-02	ci right 8.165677e-02	k: 146262	n:1800000
KS ci ratio: 1.781578e-01	ci left: 2.449362e-04	ci right 2.933621e-04	k: 483	n:1800000
KIAA0182   1800000 perm   1459 sec   (1234 perm/sec)   p_kst 2.683333e-04   p_cons 8.125667e-02   p_joint 1.627778e-04

Joint ci ratio: 2.274427e-01	ci left: 1.454358e-04	ci right 1.832658e-04	k: 296	n:1810000
Cons ci ratio: 9.797969e-03	ci left: 8.085098e-02	ci right 8.164760e-02	k: 147060	n:1810000
KS ci ratio: 1.774261e-01	ci left: 2.456946e-04	ci right 2.940495e-04	k: 487	n:1810000
KIAA0182   1810000 perm   1473 sec   (1228 perm/sec)   p_kst 2.690608e-04   p_cons 8.124862e-02   p_joint 1.635359e-04

Joint ci ratio: 2.270608e-01	ci left: 1.451548e-04	ci right 1.828395e-04	k: 297	n:1820000
Cons ci ratio: 9.769271e-03	ci left: 8.087867e-02	ci right 8.167321e-02	k: 147921	n:1820000
KS ci ratio: 1.767033e-01	ci left: 2.464450e-04	ci right 2.947289e-04	k: 491	n:1820000
KIAA0182   1820000 perm   1488 sec   (1224 perm/sec)   p_kst 2.697802e-04   p_cons 8.127527e-02   p_joint 1.631868e-04

Joint ci ratio: 2.263027e-01	ci left: 1.453925e-04	ci right 1.829952e-04	k: 299	n:1830000
Cons ci ratio: 9.742534e-03	ci left: 8.087989e-02	ci right 8.167225e-02	k: 148734	n:1830000
KS ci ratio: 1.761670e-01	ci left: 2.466653e-04	ci right 2.948301e-04	k: 494	n:1830000
KIAA0182   1830000 perm   1502 sec   (1218 perm/sec)   p_kst 2.699454e-04   p_cons 8.127541e-02   p_joint 1.633880e-04

Joint ci ratio: 2.263028e-01	ci left: 1.446023e-04	ci right 1.820007e-04	k: 299	n:1840000
Cons ci ratio: 9.716333e-03	ci left: 8.087622e-02	ci right 8.166640e-02	k: 149538	n:1840000
KS ci ratio: 1.761671e-01	ci left: 2.453247e-04	ci right 2.932277e-04	k: 494	n:1840000
KIAA0182   1840000 perm   1517 sec   (1213 perm/sec)   p_kst 2.684783e-04   p_cons 8.127065e-02   p_joint 1.625000e-04

Joint ci ratio: 2.259266e-01	ci left: 1.443306e-04	ci right 1.815880e-04	k: 300	n:1850000
Cons ci ratio: 9.691466e-03	ci left: 8.085533e-02	ci right 8.164328e-02	k: 150310	n:1850000
KS ci ratio: 1.758124e-01	ci left: 2.450321e-04	ci right 2.927714e-04	k: 496	n:1850000
KIAA0182   1850000 perm   1531 sec   (1208 perm/sec)   p_kst 2.681081e-04   p_cons 8.124865e-02   p_joint 1.621622e-04

Joint ci ratio: 2.259267e-01	ci left: 1.435546e-04	ci right 1.806118e-04	k: 300	n:1860000
Cons ci ratio: 9.664142e-03	ci left: 8.087544e-02	ci right 8.166135e-02	k: 151158	n:1860000
KS ci ratio: 1.754597e-01	ci left: 2.447427e-04	ci right 2.923198e-04	k: 498	n:1860000
KIAA0182   1860000 perm   1546 sec   (1203 perm/sec)   p_kst 2.677419e-04   p_cons 8.126774e-02   p_joint 1.612903e-04

Joint ci ratio: 2.240731e-01	ci left: 1.453101e-04	ci right 1.824701e-04	k: 305	n:1870000
Cons ci ratio: 9.638464e-03	ci left: 8.087346e-02	ci right 8.165725e-02	k: 151965	n:1870000
KS ci ratio: 1.745871e-01	ci left: 2.459906e-04	ci right 2.935474e-04	k: 503	n:1870000
KIAA0182   1870000 perm   1560 sec   (1198 perm/sec)   p_kst 2.689840e-04   p_cons 8.126471e-02   p_joint 1.631016e-04

Joint ci ratio: 2.237079e-01	ci left: 1.450392e-04	ci right 1.820613e-04	k: 306	n:1880000
Cons ci ratio: 9.612681e-03	ci left: 8.087628e-02	ci right 8.165799e-02	k: 152781	n:1880000
KS ci ratio: 1.742418e-01	ci left: 2.456995e-04	ci right 2.930962e-04	k: 505	n:1880000
KIAA0182   1880000 perm   1576 sec   (1193 perm/sec)   p_kst 2.686170e-04   p_cons 8.126649e-02   p_joint 1.627660e-04

Joint ci ratio: 2.229827e-01	ci left: 1.452708e-04	ci right 1.822153e-04	k: 308	n:1890000
Cons ci ratio: 9.588191e-03	ci left: 8.086218e-02	ci right 8.164175e-02	k: 153565	n:1890000
KS ci ratio: 1.737275e-01	ci left: 2.459177e-04	ci right 2.932018e-04	k: 508	n:1890000
KIAA0182   1890000 perm   1591 sec   (1188 perm/sec)   p_kst 2.687831e-04   p_cons 8.125132e-02   p_joint 1.629630e-04

Joint ci ratio: 2.222646e-01	ci left: 1.455002e-04	ci right 1.823675e-04	k: 310	n:1900000
Cons ci ratio: 9.563011e-03	ci left: 8.086188e-02	ci right 8.163939e-02	k: 154375	n:1900000
KS ci ratio: 1.730488e-01	ci left: 2.466373e-04	ci right 2.938552e-04	k: 512	n:1900000
KIAA0182   1900000 perm   1606 sec   (1183 perm/sec)   p_kst 2.694737e-04   p_cons 8.125000e-02   p_joint 1.631579e-04

Joint ci ratio: 2.219081e-01	ci left: 1.452328e-04	ci right 1.819653e-04	k: 311	n:1910000
Cons ci ratio: 9.536556e-03	ci left: 8.088458e-02	ci right 8.166015e-02	k: 155229	n:1910000
KS ci ratio: 1.730489e-01	ci left: 2.453460e-04	ci right 2.923167e-04	k: 512	n:1910000
KIAA0182   1910000 perm   1621 sec   (1178 perm/sec)   p_kst 2.680628e-04   p_cons 8.127173e-02   p_joint 1.628272e-04

Joint ci ratio: 2.215534e-01	ci left: 1.449683e-04	ci right 1.815673e-04	k: 312	n:1920000
Cons ci ratio: 9.511945e-03	ci left: 8.088158e-02	ci right 8.165510e-02	k: 156034	n:1920000
KS ci ratio: 1.727126e-01	ci left: 2.450648e-04	ci right 2.918809e-04	k: 514	n:1920000
KIAA0182   1920000 perm   1636 sec   (1173 perm/sec)   p_kst 2.677083e-04   p_cons 8.126771e-02   p_joint 1.625000e-04

Joint ci ratio: 2.208489e-01	ci left: 1.451960e-04	ci right 1.817201e-04	k: 314	n:1930000
Cons ci ratio: 9.486141e-03	ci left: 8.090032e-02	ci right 8.167192e-02	k: 156881	n:1930000
KS ci ratio: 1.720457e-01	ci left: 2.457781e-04	ci right 2.925304e-04	k: 518	n:1930000
KIAA0182   1930000 perm   1651 sec   (1169 perm/sec)   p_kst 2.683938e-04   p_cons 8.128549e-02   p_joint 1.626943e-04

Joint ci ratio: 2.208490e-01	ci left: 1.444476e-04	ci right 1.807834e-04	k: 314	n:1940000
Cons ci ratio: 9.460742e-03	ci left: 8.091579e-02	ci right 8.168546e-02	k: 157722	n:1940000
KS ci ratio: 1.718803e-01	ci left: 2.450045e-04	ci right 2.915602e-04	k: 519	n:1940000
KIAA0182   1940000 perm   1667 sec   (1164 perm/sec)   p_kst 2.675258e-04   p_cons 8.130000e-02   p_joint 1.618557e-04

Joint ci ratio: 2.204993e-01	ci left: 1.441913e-04	ci right 1.803975e-04	k: 315	n:1950000
Cons ci ratio: 9.436420e-03	ci left: 8.091729e-02	ci right 8.168498e-02	k: 158536	n:1950000
KS ci ratio: 1.715507e-01	ci left: 2.447296e-04	ci right 2.911347e-04	k: 521	n:1950000
KIAA0182   1950000 perm   1682 sec   (1159 perm/sec)   p_kst 2.671795e-04   p_cons 8.130051e-02   p_joint 1.615385e-04

Joint ci ratio: 2.204994e-01	ci left: 1.434556e-04	ci right 1.794771e-04	k: 315	n:1960000
Cons ci ratio: 9.412735e-03	ci left: 8.091165e-02	ci right 8.167734e-02	k: 159336	n:1960000
KS ci ratio: 1.712231e-01	ci left: 2.444576e-04	ci right 2.907134e-04	k: 523	n:1960000
KIAA0182   1960000 perm   1697 sec   (1155 perm/sec)   p_kst 2.668367e-04   p_cons 8.129388e-02   p_joint 1.607143e-04

Joint ci ratio: 2.198049e-01	ci left: 1.436867e-04	ci right 1.796371e-04	k: 317	n:1970000
Cons ci ratio: 9.388175e-03	ci left: 8.092278e-02	ci right 8.168657e-02	k: 160169	n:1970000
KS ci ratio: 1.704119e-01	ci left: 2.456463e-04	ci right 2.918842e-04	k: 528	n:1970000
KIAA0182   1970000 perm   1713 sec   (1150 perm/sec)   p_kst 2.680203e-04   p_cons 8.130406e-02   p_joint 1.609137e-04

Joint ci ratio: 2.194601e-01	ci left: 1.434383e-04	ci right 1.792627e-04	k: 318	n:1980000
Cons ci ratio: 9.365357e-03	ci left: 8.090911e-02	ci right 8.167091e-02	k: 160953	n:1980000
KS ci ratio: 1.699307e-01	ci left: 2.458563e-04	ci right 2.919896e-04	k: 531	n:1980000
KIAA0182   1980000 perm   1728 sec   (1146 perm/sec)   p_kst 2.681818e-04   p_cons 8.128939e-02   p_joint 1.606061e-04

Joint ci ratio: 2.194602e-01	ci left: 1.427175e-04	ci right 1.783619e-04	k: 318	n:1990000
Cons ci ratio: 9.341416e-03	ci left: 8.091613e-02	ci right 8.167604e-02	k: 161778	n:1990000
KS ci ratio: 1.696122e-01	ci left: 2.455832e-04	ci right 2.915701e-04	k: 533	n:1990000
KIAA0182   1990000 perm   1744 sec   (1141 perm/sec)   p_kst 2.678392e-04   p_cons 8.129548e-02   p_joint 1.597990e-04

Joint ci ratio: 2.187755e-01	ci left: 1.429490e-04	ci right 1.785248e-04	k: 320	n:2000000
Cons ci ratio: 9.316909e-03	ci left: 8.093507e-02	ci right 8.169315e-02	k: 162627	n:2000000
KS ci ratio: 1.694537e-01	ci left: 2.448340e-04	ci right 2.906334e-04	k: 534	n:2000000
KIAA0182   2000000 perm   1760 sec   (1137 perm/sec)   p_kst 2.670000e-04   p_cons 8.131350e-02   p_joint 1.600000e-04

Joint ci ratio: 2.180971e-01	ci left: 1.431784e-04	ci right 1.786860e-04	k: 322	n:2010000
Cons ci ratio: 9.292409e-03	ci left: 8.095679e-02	ci right 8.171307e-02	k: 163482	n:2010000
KS ci ratio: 1.688237e-01	ci left: 2.455218e-04	ci right 2.912617e-04	k: 538	n:2010000
KIAA0182   2010000 perm   1775 sec   (1132 perm/sec)   p_kst 2.676617e-04   p_cons 8.133433e-02   p_joint 1.601990e-04

Joint ci ratio: 2.170911e-01	ci left: 1.438738e-04	ci right 1.793674e-04	k: 325	n:2020000
Cons ci ratio: 9.270219e-03	ci left: 8.094422e-02	ci right 8.169857e-02	k: 164268	n:2020000
KS ci ratio: 1.682006e-01	ci left: 2.462030e-04	ci right 2.918834e-04	k: 542	n:2020000
KIAA0182   2020000 perm   1792 sec   (1128 perm/sec)   p_kst 2.683168e-04   p_cons 8.132079e-02   p_joint 1.608911e-04

Joint ci ratio: 2.980193e-01	ci left: 7.253991e-05	ci right 9.838012e-05	k: 172	n:2030000
Cons ci ratio: 9.246450e-03	ci left: 8.095979e-02	ci right 8.171234e-02	k: 165111	n:2030000
KS ci ratio: 1.680461e-01	ci left: 2.454621e-04	ci right 2.909589e-04	k: 543	n:2030000
KIAA0182   2030000 perm   1808 sec   (1123 perm/sec)   p_kst 2.674877e-04   p_cons 8.133547e-02   p_joint 8.472906e-05

Joint ci ratio: 2.980194e-01	ci left: 7.218433e-05	ci right 9.789786e-05	k: 172	n:2040000
Cons ci ratio: 9.224708e-03	ci left: 8.094538e-02	ci right 8.169601e-02	k: 165893	n:2040000
KS ci ratio: 1.677380e-01	ci left: 2.451980e-04	ci right 2.905542e-04	k: 545	n:2040000
KIAA0182   2040000 perm   1823 sec   (1119 perm/sec)   p_kst 2.671569e-04   p_cons 8.132010e-02   p_joint 8.431373e-05

Joint ci ratio: 2.154452e-01	ci left: 1.440753e-04	ci right 1.793134e-04	k: 330	n:2050000
Cons ci ratio: 9.201947e-03	ci left: 8.095009e-02	ci right 8.169890e-02	k: 166714	n:2050000
KS ci ratio: 1.674317e-01	ci left: 2.449366e-04	ci right 2.901533e-04	k: 547	n:2050000
KIAA0182   2050000 perm   1839 sec   (1114 perm/sec)   p_kst 2.668293e-04   p_cons 8.132390e-02   p_joint 1.609756e-04

Joint ci ratio: 2.144754e-01	ci left: 1.447538e-04	ci right 1.799776e-04	k: 333	n:2060000
Cons ci ratio: 9.180219e-03	ci left: 8.094071e-02	ci right 8.168766e-02	k: 167506	n:2060000
KS ci ratio: 1.663723e-01	ci left: 2.470037e-04	ci right 2.922847e-04	k: 554	n:2060000
KIAA0182   2060000 perm   1856 sec   (1110 perm/sec)   p_kst 2.689320e-04   p_cons 8.131359e-02   p_joint 1.616505e-04

Joint ci ratio: 2.128877e-01	ci left: 1.463407e-04	ci right 1.816526e-04	k: 338	n:2070000
Cons ci ratio: 9.158347e-03	ci left: 8.093624e-02	ci right 8.168136e-02	k: 168308	n:2070000
KS ci ratio: 1.650392e-01	ci left: 2.499780e-04	ci right 2.954006e-04	k: 563	n:2070000
KIAA0182   2070000 perm   1872 sec   (1106 perm/sec)   p_kst 2.719807e-04   p_cons 8.130821e-02   p_joint 1.632850e-04

Joint ci ratio: 2.122624e-01	ci left: 1.465475e-04	ci right 1.817919e-04	k: 340	n:2080000
Cons ci ratio: 9.135926e-03	ci left: 8.094333e-02	ci right 8.168668e-02	k: 169134	n:2080000
KS ci ratio: 1.643124e-01	ci left: 2.510810e-04	ci right 2.964832e-04	k: 568	n:2080000
KIAA0182   2080000 perm   1889 sec   (1101 perm/sec)   p_kst 2.730769e-04   p_cons 8.131442e-02   p_joint 1.634615e-04

Joint ci ratio: 2.110282e-01	ci left: 1.476588e-04	ci right 1.829373e-04	k: 344	n:2090000
Cons ci ratio: 9.114165e-03	ci left: 8.094224e-02	ci right 8.168380e-02	k: 169943	n:2090000
KS ci ratio: 1.635951e-01	ci left: 2.521739e-04	ci right 2.975550e-04	k: 573	n:2090000
KIAA0182   2090000 perm   1905 sec   (1097 perm/sec)   p_kst 2.741627e-04   p_cons 8.131244e-02   p_joint 1.645933e-04

Joint ci ratio: 2.107231e-01	ci left: 1.474067e-04	ci right 1.825675e-04	k: 345	n:2100000
Cons ci ratio: 9.092993e-03	ci left: 8.093403e-02	ci right 8.167379e-02	k: 170737	n:2100000
KS ci ratio: 1.633109e-01	ci left: 2.518865e-04	ci right 2.971294e-04	k: 575	n:2100000
KIAA0182   2100000 perm   1922 sec   (1093 perm/sec)   p_kst 2.738095e-04   p_cons 8.130333e-02   p_joint 1.642857e-04

Joint ci ratio: 2.107232e-01	ci left: 1.467081e-04	ci right 1.817022e-04	k: 345	n:2110000
Cons ci ratio: 9.070817e-03	ci left: 8.094482e-02	ci right 8.168287e-02	k: 171571	n:2110000
KS ci ratio: 1.630281e-01	ci left: 2.516019e-04	ci right 2.967077e-04	k: 577	n:2110000
KIAA0182   2110000 perm   1938 sec   (1089 perm/sec)   p_kst 2.734597e-04   p_cons 8.131327e-02   p_joint 1.635071e-04

Joint ci ratio: 2.104194e-01	ci left: 1.464629e-04	ci right 1.813417e-04	k: 346	n:2120000
Cons ci ratio: 9.049916e-03	ci left: 8.093716e-02	ci right 8.167342e-02	k: 172366	n:2120000
KS ci ratio: 1.627468e-01	ci left: 2.513200e-04	ci right 2.962900e-04	k: 579	n:2120000
KIAA0182   2120000 perm   1955 sec   (1085 perm/sec)   p_kst 2.731132e-04   p_cons 8.130472e-02   p_joint 1.632075e-04

Joint ci ratio: 2.938041e-01	ci left: 7.130747e-05	ci right 9.628250e-05	k: 177	n:2130000
Cons ci ratio: 9.030068e-03	ci left: 8.091457e-02	ci right 8.164901e-02	k: 173129	n:2130000
KS ci ratio: 1.621885e-01	ci left: 2.519417e-04	ci right 2.968532e-04	k: 583	n:2130000
KIAA0182   2130000 perm   1972 sec   (1080 perm/sec)   p_kst 2.737089e-04   p_cons 8.128122e-02   p_joint 8.309859e-05

Joint ci ratio: 2.938041e-01	ci left: 7.097426e-05	ci right 9.583258e-05	k: 177	n:2140000
Cons ci ratio: 9.008319e-03	ci left: 8.092578e-02	ci right 8.165853e-02	k: 173964	n:2140000
KS ci ratio: 1.620499e-01	ci left: 2.512127e-04	ci right 2.959523e-04	k: 584	n:2140000
KIAA0182   2140000 perm   1989 sec   (1076 perm/sec)   p_kst 2.728972e-04   p_cons 8.129159e-02   p_joint 8.271028e-05

Joint ci ratio: 2.938042e-01	ci left: 7.064414e-05	ci right 9.538685e-05	k: 177	n:2150000
Cons ci ratio: 8.987735e-03	ci left: 8.092017e-02	ci right 8.165119e-02	k: 174763	n:2150000
KS ci ratio: 1.617736e-01	ci left: 2.509368e-04	ci right 2.955436e-04	k: 586	n:2150000
KIAA0182   2150000 perm   2006 sec   (1072 perm/sec)   p_kst 2.725581e-04   p_cons 8.128512e-02   p_joint 8.232558e-05

Joint ci ratio: 2.938042e-01	ci left: 7.031708e-05	ci right 9.494525e-05	k: 177	n:2160000
Cons ci ratio: 8.966207e-03	ci left: 8.093263e-02	ci right 8.166201e-02	k: 175601	n:2160000
KS ci ratio: 1.616360e-01	ci left: 2.502193e-04	ci right 2.946571e-04	k: 587	n:2160000
KIAA0182   2160000 perm   2023 sec   (1068 perm/sec)   p_kst 2.717593e-04   p_cons 8.129676e-02   p_joint 8.194444e-05

Joint ci ratio: 2.938043e-01	ci left: 6.999304e-05	ci right 9.450772e-05	k: 177	n:2170000
Cons ci ratio: 8.945716e-03	ci left: 8.093027e-02	ci right 8.165795e-02	k: 176407	n:2170000
KS ci ratio: 1.613619e-01	ci left: 2.499506e-04	ci right 2.942581e-04	k: 589	n:2170000
KIAA0182   2170000 perm   2040 sec   (1064 perm/sec)   p_kst 2.714286e-04   p_cons 8.129355e-02   p_joint 8.156682e-05

Joint ci ratio: 2.929825e-01	ci left: 7.009693e-05	ci right 9.456657e-05	k: 178	n:2180000
Cons ci ratio: 8.924598e-03	ci left: 8.094074e-02	ci right 8.166679e-02	k: 177241	n:2180000
KS ci ratio: 1.605475e-01	ci left: 2.514455e-04	ci right 2.957713e-04	k: 595	n:2180000
KIAA0182   2180000 perm   2057 sec   (1060 perm/sec)   p_kst 2.729358e-04   p_cons 8.130321e-02   p_joint 8.165138e-05

Joint ci ratio: 2.929825e-01	ci left: 6.977685e-05	ci right 9.413477e-05	k: 178	n:2190000
Cons ci ratio: 8.902322e-03	ci left: 8.097300e-02	ci right 8.169751e-02	k: 178123	n:2190000
KS ci ratio: 1.602788e-01	ci left: 2.511739e-04	ci right 2.953706e-04	k: 597	n:2190000
KIAA0182   2190000 perm   2074 sec   (1056 perm/sec)   p_kst 2.726027e-04   p_cons 8.133470e-02   p_joint 8.127854e-05

Joint ci ratio: 2.929826e-01	ci left: 6.945968e-05	ci right 9.370688e-05	k: 178	n:2200000
Cons ci ratio: 8.881320e-03	ci left: 8.098637e-02	ci right 8.170928e-02	k: 178964	n:2200000
KS ci ratio: 1.598783e-01	ci left: 2.513412e-04	ci right 2.954463e-04	k: 600	n:2200000
KIAA0182   2200000 perm   2092 sec   (1052 perm/sec)   p_kst 2.727273e-04   p_cons 8.134727e-02   p_joint 8.090909e-05

Joint ci ratio: 2.921676e-01	ci left: 6.956467e-05	ci right 9.376847e-05	k: 179	n:2210000
Cons ci ratio: 8.862290e-03	ci left: 8.096891e-02	ci right 8.169011e-02	k: 179737	n:2210000
KS ci ratio: 1.596129e-01	ci left: 2.510727e-04	ci right 2.950505e-04	k: 602	n:2210000
KIAA0182   2210000 perm   2109 sec   (1048 perm/sec)   p_kst 2.723982e-04   p_cons 8.132896e-02   p_joint 8.099548e-05

Joint ci ratio: 2.913594e-01	ci left: 6.966881e-05	ci right 9.382941e-05	k: 180	n:2220000
Cons ci ratio: 8.842208e-03	ci left: 8.097139e-02	ci right 8.169097e-02	k: 180554	n:2220000
KS ci ratio: 1.594808e-01	ci left: 2.503742e-04	ci right 2.941899e-04	k: 603	n:2220000
KIAA0182   2220000 perm   2126 sec   (1044 perm/sec)   p_kst 2.716216e-04   p_cons 8.133063e-02   p_joint 8.108108e-05

Joint ci ratio: 2.913594e-01	ci left: 6.935639e-05	ci right 9.340866e-05	k: 180	n:2230000
Cons ci ratio: 8.822872e-03	ci left: 8.096355e-02	ci right 8.168148e-02	k: 181348	n:2230000
KS ci ratio: 1.593490e-01	ci left: 2.496820e-04	ci right 2.933370e-04	k: 604	n:2230000
KIAA0182   2230000 perm   2144 sec   (1040 perm/sec)   p_kst 2.708520e-04   p_cons 8.132197e-02   p_joint 8.071749e-05

Joint ci ratio: 2.897628e-01	ci left: 6.987456e-05	ci right 9.394940e-05	k: 182	n:2240000
Cons ci ratio: 8.802241e-03	ci left: 8.097985e-02	ci right 8.169624e-02	k: 182196	n:2240000
KS ci ratio: 1.590863e-01	ci left: 2.494247e-04	ci right 2.929558e-04	k: 606	n:2240000
KIAA0182   2240000 perm   2161 sec   (1036 perm/sec)   p_kst 2.705357e-04   p_cons 8.133750e-02   p_joint 8.125000e-05

Joint ci ratio: 2.889744e-01	ci left: 6.997619e-05	ci right 9.400845e-05	k: 183	n:2250000
Cons ci ratio: 8.781624e-03	ci left: 8.099822e-02	ci right 8.171308e-02	k: 183049	n:2250000
KS ci ratio: 1.588249e-01	ci left: 2.491696e-04	ci right 2.925780e-04	k: 608	n:2250000
KIAA0182   2250000 perm   2179 sec   (1033 perm/sec)   p_kst 2.702222e-04   p_cons 8.135511e-02   p_joint 8.133333e-05

Joint ci ratio: 2.889744e-01	ci left: 6.966656e-05	ci right 9.359249e-05	k: 183	n:2260000
Cons ci ratio: 8.762163e-03	ci left: 8.099921e-02	ci right 8.171249e-02	k: 183863	n:2260000
KS ci ratio: 1.586947e-01	ci left: 2.484920e-04	ci right 2.917435e-04	k: 609	n:2260000
KIAA0182   2260000 perm   2197 sec   (1029 perm/sec)   p_kst 2.694690e-04   p_cons 8.135531e-02   p_joint 8.097345e-05

Joint ci ratio: 2.889745e-01	ci left: 6.935966e-05	ci right 9.318019e-05	k: 183	n:2270000
Cons ci ratio: 8.741903e-03	ci left: 8.101601e-02	ci right 8.172779e-02	k: 184713	n:2270000
KS ci ratio: 1.584352e-01	ci left: 2.482434e-04	ci right 2.913743e-04	k: 611	n:2270000
KIAA0182   2270000 perm   2215 sec   (1025 perm/sec)   p_kst 2.691630e-04   p_cons 8.137137e-02   p_joint 8.061674e-05

Joint ci ratio: 2.881924e-01	ci left: 6.946231e-05	ci right 9.324176e-05	k: 184	n:2280000
Cons ci ratio: 8.721629e-03	ci left: 8.103530e-02	ci right 8.174558e-02	k: 185569	n:2280000
KS ci ratio: 1.580483e-01	ci left: 2.484183e-04	ci right 2.914642e-04	k: 614	n:2280000
KIAA0182   2280000 perm   2232 sec   (1021 perm/sec)   p_kst 2.692982e-04   p_cons 8.138991e-02   p_joint 8.070175e-05

Joint ci ratio: 2.874166e-01	ci left: 6.956414e-05	ci right 9.330271e-05	k: 185	n:2290000
Cons ci ratio: 8.702614e-03	ci left: 8.103525e-02	ci right 8.174397e-02	k: 186381	n:2290000
KS ci ratio: 1.574096e-01	ci left: 2.494308e-04	ci right 2.924609e-04	k: 619	n:2290000
KIAA0182   2290000 perm   2250 sec   (1018 perm/sec)   p_kst 2.703057e-04   p_cons 8.138908e-02   p_joint 8.078603e-05

Joint ci ratio: 2.866471e-01	ci left: 6.966517e-05	ci right 9.336304e-05	k: 186	n:2300000
Cons ci ratio: 8.683066e-03	ci left: 8.104648e-02	ci right 8.175370e-02	k: 187219	n:2300000
KS ci ratio: 1.567787e-01	ci left: 2.504348e-04	ci right 2.934486e-04	k: 624	n:2300000
KIAA0182   2300000 perm   2268 sec   (1014 perm/sec)   p_kst 2.713043e-04   p_cons 8.139957e-02   p_joint 8.086957e-05

Joint ci ratio: 2.858837e-01	ci left: 6.976542e-05	ci right 9.342277e-05	k: 187	n:2310000
Cons ci ratio: 8.664552e-03	ci left: 8.104206e-02	ci right 8.174773e-02	k: 188021	n:2310000
KS ci ratio: 1.562793e-01	ci left: 2.510144e-04	ci right 2.939776e-04	k: 628	n:2310000
KIAA0182   2310000 perm   2285 sec   (1011 perm/sec)   p_kst 2.718615e-04   p_cons 8.139437e-02   p_joint 8.095238e-05

Joint ci ratio: 2.858837e-01	ci left: 6.946470e-05	ci right 9.302008e-05	k: 187	n:2320000
Cons ci ratio: 8.646131e-03	ci left: 8.103811e-02	ci right 8.174224e-02	k: 188824	n:2320000
KS ci ratio: 1.557847e-01	ci left: 2.515893e-04	ci right 2.945019e-04	k: 632	n:2320000
KIAA0182   2320000 perm   2303 sec   (1007 perm/sec)   p_kst 2.724138e-04   p_cons 8.138966e-02   p_joint 8.060345e-05

Joint ci ratio: 2.851264e-01	ci left: 6.956503e-05	ci right 9.308069e-05	k: 188	n:2330000
Cons ci ratio: 8.628174e-03	ci left: 8.102821e-02	ci right 8.173078e-02	k: 189613	n:2330000
KS ci ratio: 1.552948e-01	ci left: 2.521594e-04	ci right 2.950214e-04	k: 636	n:2330000
KIAA0182   2330000 perm   2321 sec   (1004 perm/sec)   p_kst 2.729614e-04   p_cons 8.137897e-02   p_joint 8.068670e-05

Joint ci ratio: 2.851265e-01	ci left: 6.926774e-05	ci right 9.268291e-05	k: 188	n:2340000
Cons ci ratio: 8.608999e-03	ci left: 8.104141e-02	ci right 8.174253e-02	k: 190456	n:2340000
KS ci ratio: 1.550516e-01	ci left: 2.519033e-04	ci right 2.946485e-04	k: 638	n:2340000
KIAA0182   2340000 perm   2339 sec   (1000 perm/sec)   p_kst 2.726496e-04   p_cons 8.139145e-02   p_joint 8.034188e-05

Joint ci ratio: 2.843751e-01	ci left: 6.936813e-05	ci right 9.274435e-05	k: 189	n:2350000
Cons ci ratio: 8.590563e-03	ci left: 8.104389e-02	ci right 8.174352e-02	k: 191274	n:2350000
KS ci ratio: 1.548095e-01	ci left: 2.516495e-04	ci right 2.942787e-04	k: 640	n:2350000
KIAA0182   2350000 perm   2357 sec   (997 perm/sec)   p_kst 2.723404e-04   p_cons 8.139319e-02   p_joint 8.042553e-05

Joint ci ratio: 2.836297e-01	ci left: 6.946775e-05	ci right 9.280520e-05	k: 190	n:2360000
Cons ci ratio: 8.572414e-03	ci left: 8.104339e-02	ci right 8.174153e-02	k: 192085	n:2360000
KS ci ratio: 1.543287e-01	ci left: 2.522125e-04	ci right 2.947922e-04	k: 644	n:2360000
KIAA0182   2360000 perm   2375 sec   (994 perm/sec)   p_kst 2.728814e-04   p_cons 8.139195e-02   p_joint 8.050847e-05

Joint ci ratio: 2.836298e-01	ci left: 6.917463e-05	ci right 9.241361e-05	k: 190	n:2370000
Cons ci ratio: 8.555081e-03	ci left: 8.103069e-02	ci right 8.172730e-02	k: 192867	n:2370000
KS ci ratio: 1.540900e-01	ci left: 2.519596e-04	ci right 2.944248e-04	k: 646	n:2370000
KIAA0182   2370000 perm   2394 sec   (990 perm/sec)   p_kst 2.725738e-04   p_cons 8.137848e-02   p_joint 8.016878e-05

Joint ci ratio: 2.836298e-01	ci left: 6.888398e-05	ci right 9.202532e-05	k: 190	n:2380000
Cons ci ratio: 8.536988e-03	ci left: 8.103319e-02	ci right 8.172834e-02	k: 193685	n:2380000
KS ci ratio: 1.539711e-01	ci left: 2.513050e-04	ci right 2.936240e-04	k: 647	n:2380000
KIAA0182   2380000 perm   2412 sec   (987 perm/sec)   p_kst 2.718487e-04   p_cons 8.138025e-02   p_joint 7.983193e-05

Joint ci ratio: 2.836299e-01	ci left: 6.859576e-05	ci right 9.164028e-05	k: 190	n:2390000
Cons ci ratio: 8.519009e-03	ci left: 8.103566e-02	ci right 8.172937e-02	k: 194503	n:2390000
KS ci ratio: 1.539712e-01	ci left: 2.502535e-04	ci right 2.923955e-04	k: 647	n:2390000
KIAA0182   2390000 perm   2431 sec   (983 perm/sec)   p_kst 2.707113e-04   p_cons 8.138201e-02   p_joint 7.949791e-05

Joint ci ratio: 2.828903e-01	ci left: 6.869702e-05	ci right 9.170463e-05	k: 191	n:2400000
Cons ci ratio: 8.500504e-03	ci left: 8.104935e-02	ci right 8.174166e-02	k: 195348	n:2400000
KS ci ratio: 1.534982e-01	ci left: 2.508133e-04	ci right 2.929079e-04	k: 651	n:2400000
KIAA0182   2400000 perm   2449 sec   (980 perm/sec)   p_kst 2.712500e-04   p_cons 8.139500e-02   p_joint 7.958333e-05

Joint ci ratio: 2.821564e-01	ci left: 6.879751e-05	ci right 9.176838e-05	k: 192	n:2410000
Cons ci ratio: 8.483626e-03	ci left: 8.103642e-02	ci right 8.172724e-02	k: 196129	n:2410000
KS ci ratio: 1.530294e-01	ci left: 2.513687e-04	ci right 2.934159e-04	k: 655	n:2410000
KIAA0182   2410000 perm   2467 sec   (977 perm/sec)   p_kst 2.717842e-04   p_cons 8.138133e-02   p_joint 7.966805e-05

Joint ci ratio: 2.821565e-01	ci left: 6.851322e-05	ci right 9.138917e-05	k: 192	n:2420000
Cons ci ratio: 8.464999e-03	ci left: 8.105619e-02	ci right 8.174564e-02	k: 196989	n:2420000
KS ci ratio: 1.527967e-01	ci left: 2.511248e-04	ci right 2.930615e-04	k: 657	n:2420000
KIAA0182   2420000 perm   2486 sec   (973 perm/sec)   p_kst 2.714876e-04   p_cons 8.140041e-02   p_joint 7.933884e-05

Joint ci ratio: 2.814283e-01	ci left: 6.861372e-05	ci right 9.145361e-05	k: 193	n:2430000
Cons ci ratio: 8.447331e-03	ci left: 8.106100e-02	ci right 8.174905e-02	k: 197813	n:2430000
KS ci ratio: 1.525650e-01	ci left: 2.508830e-04	ci right 2.927099e-04	k: 659	n:2430000
KIAA0182   2430000 perm   2505 sec   (970 perm/sec)   p_kst 2.711934e-04   p_cons 8.140453e-02   p_joint 7.942387e-05

Joint ci ratio: 2.799887e-01	ci left: 6.909450e-05	ci right 9.195602e-05	k: 195	n:2440000
Cons ci ratio: 8.428596e-03	ci left: 8.108664e-02	ci right 8.177337e-02	k: 198688	n:2440000
KS ci ratio: 1.523344e-01	ci left: 2.506432e-04	ci right 2.923612e-04	k: 661	n:2440000
KIAA0182   2440000 perm   2524 sec   (967 perm/sec)   p_kst 2.709016e-04   p_cons 8.142951e-02   p_joint 7.991803e-05

Joint ci ratio: 2.799887e-01	ci left: 6.881248e-05	ci right 9.158069e-05	k: 195	n:2450000
Cons ci ratio: 8.410948e-03	ci left: 8.109496e-02	ci right 8.178032e-02	k: 199521	n:2450000
KS ci ratio: 1.523345e-01	ci left: 2.496201e-04	ci right 2.911679e-04	k: 661	n:2450000
KIAA0182   2450000 perm   2543 sec   (963 perm/sec)   p_kst 2.697959e-04   p_cons 8.143714e-02   p_joint 7.959184e-05

Joint ci ratio: 2.799888e-01	ci left: 6.853275e-05	ci right 9.120841e-05	k: 195	n:2460000
Cons ci ratio: 8.394163e-03	ci left: 8.108982e-02	ci right 8.177377e-02	k: 200321	n:2460000
KS ci ratio: 1.521049e-01	ci left: 2.493874e-04	ci right 2.908282e-04	k: 663	n:2460000
KIAA0182   2460000 perm   2563 sec   (960 perm/sec)   p_kst 2.695122e-04   p_cons 8.143130e-02   p_joint 7.926829e-05

Joint ci ratio: 2.785710e-01	ci left: 6.900831e-05	ci right 9.170542e-05	k: 197	n:2470000
Cons ci ratio: 8.377274e-03	ci left: 8.108837e-02	ci right 8.177091e-02	k: 201130	n:2470000
KS ci ratio: 1.516488e-01	ci left: 2.499357e-04	ci right 2.913317e-04	k: 667	n:2470000
KIAA0182   2470000 perm   2582 sec   (957 perm/sec)   p_kst 2.700405e-04   p_cons 8.142915e-02   p_joint 7.975709e-05

Joint ci ratio: 2.771746e-01	ci left: 6.948032e-05	ci right 9.219813e-05	k: 199	n:2480000
Cons ci ratio: 8.360757e-03	ci left: 8.108209e-02	ci right 8.176324e-02	k: 201927	n:2480000
KS ci ratio: 1.513094e-01	ci left: 2.500917e-04	ci right 2.914125e-04	k: 670	n:2480000
KIAA0182   2480000 perm   2601 sec   (953 perm/sec)   p_kst 2.701613e-04   p_cons 8.142218e-02   p_joint 8.024194e-05

Joint ci ratio: 2.744436e-01	ci left: 7.069663e-05	ci right 9.354509e-05	k: 203	n:2490000
Cons ci ratio: 8.344674e-03	ci left: 8.106986e-02	ci right 8.174959e-02	k: 202709	n:2490000
KS ci ratio: 1.506373e-01	ci left: 2.514059e-04	ci right 2.927427e-04	k: 676	n:2490000
KIAA0182   2490000 perm   2620 sec   (950 perm/sec)   p_kst 2.714859e-04   p_cons 8.140924e-02   p_joint 8.152610e-05

Joint ci ratio: 2.731080e-01	ci left: 7.115893e-05	ci right 9.402569e-05	k: 205	n:2500000
Cons ci ratio: 8.328437e-03	ci left: 8.106212e-02	ci right 8.174045e-02	k: 203502	n:2500000
KS ci ratio: 1.505262e-01	ci left: 2.507852e-04	ci right 2.919868e-04	k: 677	n:2500000
KIAA0182   2500000 perm   2640 sec   (947 perm/sec)   p_kst 2.708000e-04   p_cons 8.140080e-02   p_joint 8.200000e-05

Joint ci ratio: 2.717918e-01	ci left: 7.161782e-05	ci right 9.450219e-05	k: 207	n:2510000
Cons ci ratio: 8.311742e-03	ci left: 8.106438e-02	ci right 8.174137e-02	k: 204320	n:2510000
KS ci ratio: 1.498645e-01	ci left: 2.520867e-04	ci right 2.933037e-04	k: 683	n:2510000
KIAA0182   2510000 perm   2659 sec   (944 perm/sec)   p_kst 2.721116e-04   p_cons 8.140239e-02   p_joint 8.247012e-05

Joint ci ratio: 2.711408e-01	ci left: 7.170344e-05	ci right 9.455095e-05	k: 208	n:2520000
Cons ci ratio: 8.294728e-03	ci left: 8.107415e-02	ci right 8.174983e-02	k: 205157	n:2520000
KS ci ratio: 1.494282e-01	ci left: 2.526142e-04	ci right 2.937865e-04	k: 687	n:2520000
KIAA0182   2520000 perm   2678 sec   (941 perm/sec)   p_kst 2.726190e-04   p_cons 8.141151e-02   p_joint 8.253968e-05

Joint ci ratio: 2.698526e-01	ci left: 7.215694e-05	ci right 9.502122e-05	k: 210	n:2530000
Cons ci ratio: 8.278256e-03	ci left: 8.107596e-02	ci right 8.175030e-02	k: 205974	n:2530000
KS ci ratio: 1.493197e-01	ci left: 2.519962e-04	ci right 2.930353e-04	k: 688	n:2530000
KIAA0182   2530000 perm   2698 sec   (938 perm/sec)   p_kst 2.719368e-04   p_cons 8.141265e-02   p_joint 8.300395e-05

Joint ci ratio: 2.698527e-01	ci left: 7.187286e-05	ci right 9.464712e-05	k: 210	n:2540000
Cons ci ratio: 8.262056e-03	ci left: 8.107461e-02	ci right 8.174761e-02	k: 206783	n:2540000
KS ci ratio: 1.488881e-01	ci left: 2.525202e-04	ci right 2.935152e-04	k: 692	n:2540000
KIAA0182   2540000 perm   2717 sec   (935 perm/sec)   p_kst 2.724409e-04   p_cons 8.141063e-02   p_joint 8.267717e-05

Joint ci ratio: 2.698527e-01	ci left: 7.159100e-05	ci right 9.427596e-05	k: 210	n:2550000
Cons ci ratio: 8.245713e-03	ci left: 8.107757e-02	ci right 8.174926e-02	k: 207603	n:2550000
KS ci ratio: 1.481417e-01	ci left: 2.541730e-04	ci right 2.952111e-04	k: 699	n:2550000
KIAA0182   2550000 perm   2736 sec   (932 perm/sec)   p_kst 2.741176e-04   p_cons 8.141294e-02   p_joint 8.235294e-05

Joint ci ratio: 2.685827e-01	ci left: 7.203988e-05	ci right 9.474154e-05	k: 212	n:2560000
Cons ci ratio: 8.229036e-03	ci left: 8.108831e-02	ci right 8.175873e-02	k: 208443	n:2560000
KS ci ratio: 1.477202e-01	ci left: 2.546848e-04	ci right 2.956783e-04	k: 703	n:2560000
KIAA0182   2560000 perm   2756 sec   (929 perm/sec)   p_kst 2.746094e-04   p_cons 8.142305e-02   p_joint 8.281250e-05

Joint ci ratio: 2.685828e-01	ci left: 7.175956e-05	ci right 9.437290e-05	k: 212	n:2570000
Cons ci ratio: 8.213187e-03	ci left: 8.108577e-02	ci right 8.175486e-02	k: 209249	n:2570000
KS ci ratio: 1.475109e-01	ci left: 2.544433e-04	ci right 2.953347e-04	k: 705	n:2570000
KIAA0182   2570000 perm   2776 sec   (926 perm/sec)   p_kst 2.743191e-04   p_cons 8.141984e-02   p_joint 8.249027e-05

Joint ci ratio: 2.685828e-01	ci left: 7.148142e-05	ci right 9.400712e-05	k: 212	n:2580000
Cons ci ratio: 8.197535e-03	ci left: 8.108131e-02	ci right 8.174909e-02	k: 210050	n:2580000
KS ci ratio: 1.471984e-01	ci left: 2.545770e-04	ci right 2.953956e-04	k: 708	n:2580000
KIAA0182   2580000 perm   2795 sec   (923 perm/sec)   p_kst 2.744186e-04   p_cons 8.141473e-02   p_joint 8.217054e-05

Joint ci ratio: 2.685829e-01	ci left: 7.120543e-05	ci right 9.364416e-05	k: 212	n:2590000
Cons ci ratio: 8.181740e-03	ci left: 8.108113e-02	ci right 8.174761e-02	k: 210862	n:2590000
KS ci ratio: 1.470948e-01	ci left: 2.539660e-04	ci right 2.946554e-04	k: 709	n:2590000
KIAA0182   2590000 perm   2815 sec   (920 perm/sec)   p_kst 2.737452e-04   p_cons 8.141390e-02   p_joint 8.185328e-05

Joint ci ratio: 2.679546e-01	ci left: 7.129032e-05	ci right 9.369441e-05	k: 213	n:2600000
Cons ci ratio: 8.165678e-03	ci left: 8.108747e-02	ci right 8.175269e-02	k: 211691	n:2600000
KS ci ratio: 1.466821e-01	ci left: 2.544711e-04	ci right 2.951171e-04	k: 713	n:2600000
KIAA0182   2600000 perm   2835 sec   (917 perm/sec)   p_kst 2.742308e-04   p_cons 8.141962e-02   p_joint 8.192308e-05

Joint ci ratio: 2.667111e-01	ci left: 7.173211e-05	ci right 9.415294e-05	k: 215	n:2610000
Cons ci ratio: 8.149711e-03	ci left: 8.109377e-02	ci right 8.175773e-02	k: 212520	n:2610000
KS ci ratio: 1.463749e-01	ci left: 2.546034e-04	ci right 2.951779e-04	k: 716	n:2610000
KIAA0182   2610000 perm   2855 sec   (914 perm/sec)   p_kst 2.743295e-04   p_cons 8.142529e-02   p_joint 8.237548e-05

Joint ci ratio: 2.667112e-01	ci left: 7.145832e-05	ci right 9.379358e-05	k: 215	n:2620000
Cons ci ratio: 8.134398e-03	ci left: 8.108973e-02	ci right 8.175241e-02	k: 213322	n:2620000
KS ci ratio: 1.459683e-01	ci left: 2.551025e-04	ci right 2.956338e-04	k: 720	n:2620000
KIAA0182   2620000 perm   2875 sec   (911 perm/sec)   p_kst 2.748092e-04   p_cons 8.142061e-02   p_joint 8.206107e-05

Joint ci ratio: 2.654848e-01	ci left: 7.189635e-05	ci right 9.424801e-05	k: 217	n:2630000
Cons ci ratio: 8.118902e-03	ci left: 8.109066e-02	ci right 8.175208e-02	k: 214137	n:2630000
KS ci ratio: 1.456656e-01	ci left: 2.552316e-04	ci right 2.956919e-04	k: 723	n:2630000
KIAA0182   2630000 perm   2896 sec   (908 perm/sec)   p_kst 2.749049e-04   p_cons 8.142091e-02   p_joint 8.250951e-05

Joint ci ratio: 2.654849e-01	ci left: 7.162401e-05	ci right 9.389101e-05	k: 217	n:2640000
Cons ci ratio: 8.103536e-03	ci left: 8.109083e-02	ci right 8.175099e-02	k: 214950	n:2640000
KS ci ratio: 1.455651e-01	ci left: 2.546298e-04	ci right 2.949645e-04	k: 724	n:2640000
KIAA0182   2640000 perm   2916 sec   (905 perm/sec)   p_kst 2.742424e-04   p_cons 8.142045e-02   p_joint 8.219697e-05

Joint ci ratio: 2.654849e-01	ci left: 7.135373e-05	ci right 9.353671e-05	k: 217	n:2650000
Cons ci ratio: 8.087522e-03	ci left: 8.110456e-02	ci right 8.176352e-02	k: 215799	n:2650000
KS ci ratio: 1.452649e-01	ci left: 2.547598e-04	ci right 2.950246e-04	k: 727	n:2650000
KIAA0182   2650000 perm   2936 sec   (903 perm/sec)   p_kst 2.743396e-04   p_cons 8.143358e-02   p_joint 8.188679e-05

Joint ci ratio: 2.654850e-01	ci left: 7.108548e-05	ci right 9.318507e-05	k: 217	n:2660000
Cons ci ratio: 8.072312e-03	ci left: 8.110505e-02	ci right 8.176278e-02	k: 216613	n:2660000
KS ci ratio: 1.450658e-01	ci left: 2.545266e-04	ci right 2.946947e-04	k: 729	n:2660000
KIAA0182   2660000 perm   2956 sec   (900 perm/sec)   p_kst 2.740602e-04   p_cons 8.143346e-02   p_joint 8.157895e-05

Joint ci ratio: 2.642754e-01	ci left: 7.151858e-05	ci right 9.363475e-05	k: 219	n:2670000
Cons ci ratio: 8.057814e-03	ci left: 8.109395e-02	ci right 8.175040e-02	k: 217396	n:2670000
KS ci ratio: 1.447686e-01	ci left: 2.546562e-04	ci right 2.947553e-04	k: 732	n:2670000
KIAA0182   2670000 perm   2977 sec   (897 perm/sec)   p_kst 2.741573e-04   p_cons 8.142172e-02   p_joint 8.202247e-05

Joint ci ratio: 2.642754e-01	ci left: 7.125172e-05	ci right 9.328536e-05	k: 219	n:2680000
Cons ci ratio: 8.042430e-03	ci left: 8.110082e-02	ci right 8.175606e-02	k: 218227	n:2680000
KS ci ratio: 1.444732e-01	ci left: 2.547849e-04	ci right 2.948153e-04	k: 735	n:2680000
KIAA0182   2680000 perm   2997 sec   (894 perm/sec)   p_kst 2.742537e-04   p_cons 8.142799e-02   p_joint 8.171642e-05

Joint ci ratio: 2.642755e-01	ci left: 7.098684e-05	ci right 9.293858e-05	k: 219	n:2690000
Cons ci ratio: 8.026675e-03	ci left: 8.111616e-02	ci right 8.177024e-02	k: 219081	n:2690000
KS ci ratio: 1.443752e-01	ci left: 2.541961e-04	ci right 2.941045e-04	k: 736	n:2690000
KIAA0182   2690000 perm   3017 sec   (892 perm/sec)   p_kst 2.736059e-04   p_cons 8.144275e-02   p_joint 8.141264e-05

Joint ci ratio: 2.642755e-01	ci left: 7.072392e-05	ci right 9.259437e-05	k: 219	n:2700000
Cons ci ratio: 8.012182e-03	ci left: 8.110959e-02	ci right 8.176242e-02	k: 219876	n:2700000
KS ci ratio: 1.441798e-01	ci left: 2.539686e-04	ci right 2.937827e-04	k: 738	n:2700000
KIAA0182   2700000 perm   3038 sec   (889 perm/sec)   p_kst 2.733333e-04   p_cons 8.143556e-02   p_joint 8.111111e-05

Joint ci ratio: 2.642756e-01	ci left: 7.046295e-05	ci right 9.225269e-05	k: 219	n:2710000
Cons ci ratio: 7.996545e-03	ci left: 8.112589e-02	ci right 8.177758e-02	k: 220733	n:2710000
KS ci ratio: 1.437911e-01	ci left: 2.544543e-04	ci right 2.942278e-04	k: 742	n:2710000
KIAA0182   2710000 perm   3058 sec   (886 perm/sec)   p_kst 2.738007e-04   p_cons 8.145129e-02   p_joint 8.081181e-05

Joint ci ratio: 2.630824e-01	ci left: 7.089059e-05	ci right 9.269731e-05	k: 221	n:2720000
Cons ci ratio: 7.982607e-03	ci left: 8.111199e-02	ci right 8.176243e-02	k: 221508	n:2720000
KS ci ratio: 1.435980e-01	ci left: 2.542277e-04	ci right 2.939078e-04	k: 744	n:2720000
KIAA0182   2720000 perm   3079 sec   (883 perm/sec)   p_kst 2.735294e-04   p_cons 8.143676e-02   p_joint 8.125000e-05

Joint ci ratio: 2.630824e-01	ci left: 7.063092e-05	ci right 9.235776e-05	k: 221	n:2730000
Cons ci ratio: 7.966967e-03	ci left: 8.113147e-02	ci right 8.178078e-02	k: 222374	n:2730000
KS ci ratio: 1.434056e-01	ci left: 2.540027e-04	ci right 2.935901e-04	k: 746	n:2730000
KIAA0182   2730000 perm   3100 sec   (881 perm/sec)   p_kst 2.732601e-04   p_cons 8.145568e-02   p_joint 8.095238e-05

Joint ci ratio: 2.624919e-01	ci left: 7.071406e-05	ci right 9.240964e-05	k: 222	n:2740000
Cons ci ratio: 7.952542e-03	ci left: 8.112967e-02	ci right 8.177778e-02	k: 223182	n:2740000
KS ci ratio: 1.431185e-01	ci left: 2.541313e-04	ci right 2.936527e-04	k: 749	n:2740000
KIAA0182   2740000 perm   3121 sec   (878 perm/sec)   p_kst 2.733577e-04   p_cons 8.145328e-02   p_joint 8.102190e-05

Joint ci ratio: 2.624919e-01	ci left: 7.045692e-05	ci right 9.207360e-05	k: 222	n:2750000
Cons ci ratio: 7.938698e-03	ci left: 8.111845e-02	ci right 8.176534e-02	k: 223964	n:2750000
KS ci ratio: 1.429281e-01	ci left: 2.539085e-04	ci right 2.933382e-04	k: 751	n:2750000
KIAA0182   2750000 perm   3142 sec   (875 perm/sec)   p_kst 2.730909e-04   p_cons 8.144145e-02   p_joint 8.072727e-05

Joint ci ratio: 2.619053e-01	ci left: 7.054015e-05	ci right 9.212608e-05	k: 223	n:2760000
Cons ci ratio: 7.924637e-03	ci left: 8.111274e-02	ci right 8.175843e-02	k: 224761	n:2760000
KS ci ratio: 1.426439e-01	ci left: 2.540366e-04	ci right 2.934011e-04	k: 754	n:2760000
KIAA0182   2760000 perm   3163 sec   (873 perm/sec)   p_kst 2.731884e-04   p_cons 8.143514e-02   p_joint 8.079710e-05

Joint ci ratio: 2.619054e-01	ci left: 7.028549e-05	ci right 9.179350e-05	k: 223	n:2770000
Cons ci ratio: 7.910918e-03	ci left: 8.110202e-02	ci right 8.174651e-02	k: 225544	n:2770000
KS ci ratio: 1.424553e-01	ci left: 2.538158e-04	ci right 2.930897e-04	k: 756	n:2770000
KIAA0182   2770000 perm   3185 sec   (870 perm/sec)   p_kst 2.729242e-04   p_cons 8.142383e-02   p_joint 8.050542e-05

Joint ci ratio: 2.613227e-01	ci left: 7.036879e-05	ci right 9.184655e-05	k: 224	n:2780000
Cons ci ratio: 7.896226e-03	ci left: 8.111113e-02	ci right 8.175449e-02	k: 226382	n:2780000
KS ci ratio: 1.423614e-01	ci left: 2.532497e-04	ci right 2.924079e-04	k: 757	n:2780000
KIAA0182   2780000 perm   3206 sec   (867 perm/sec)   p_kst 2.723022e-04   p_cons 8.143237e-02   p_joint 8.057554e-05

Joint ci ratio: 2.613227e-01	ci left: 7.011657e-05	ci right 9.151736e-05	k: 224	n:2790000
Cons ci ratio: 7.882201e-03	ci left: 8.110909e-02	ci right 8.175128e-02	k: 227189	n:2790000
KS ci ratio: 1.421740e-01	ci left: 2.530333e-04	ci right 2.921022e-04	k: 759	n:2790000
KIAA0182   2790000 perm   3227 sec   (865 perm/sec)   p_kst 2.720430e-04   p_cons 8.142975e-02   p_joint 8.028674e-05

Joint ci ratio: 2.601689e-01	ci left: 7.053376e-05	ci right 9.195137e-05	k: 226	n:2800000
Cons ci ratio: 7.868682e-03	ci left: 8.109886e-02	ci right 8.173986e-02	k: 227973	n:2800000
KS ci ratio: 1.418942e-01	ci left: 2.531630e-04	ci right 2.921685e-04	k: 762	n:2800000
KIAA0182   2800000 perm   3248 sec   (862 perm/sec)   p_kst 2.721429e-04   p_cons 8.141893e-02   p_joint 8.071429e-05

Joint ci ratio: 2.601690e-01	ci left: 7.028275e-05	ci right 9.162414e-05	k: 226	n:2810000
Cons ci ratio: 7.854728e-03	ci left: 8.109829e-02	ci right 8.173816e-02	k: 228784	n:2810000
KS ci ratio: 1.418942e-01	ci left: 2.522620e-04	ci right 2.911287e-04	k: 762	n:2810000
KIAA0182   2810000 perm   3270 sec   (859 perm/sec)   p_kst 2.711744e-04   p_cons 8.141779e-02   p_joint 8.042705e-05

Joint ci ratio: 2.601690e-01	ci left: 7.003352e-05	ci right 9.129924e-05	k: 226	n:2820000
Cons ci ratio: 7.841666e-03	ci left: 8.108216e-02	ci right 8.172083e-02	k: 229551	n:2820000
KS ci ratio: 1.417086e-01	ci left: 2.520516e-04	ci right 2.908307e-04	k: 764	n:2820000
KIAA0182   2820000 perm   3291 sec   (857 perm/sec)   p_kst 2.709220e-04   p_cons 8.140106e-02   p_joint 8.014184e-05

Joint ci ratio: 2.601691e-01	ci left: 6.978605e-05	ci right 9.097663e-05	k: 226	n:2830000
Cons ci ratio: 7.827818e-03	ci left: 8.108237e-02	ci right 8.171990e-02	k: 230364	n:2830000
KS ci ratio: 1.414316e-01	ci left: 2.521834e-04	ci right 2.909006e-04	k: 767	n:2830000
KIAA0182   2830000 perm   3313 sec   (854 perm/sec)   p_kst 2.710247e-04   p_cons 8.140071e-02   p_joint 7.985866e-05

Joint ci ratio: 2.590304e-01	ci left: 7.019873e-05	ci right 9.140623e-05	k: 228	n:2840000
Cons ci ratio: 7.813142e-03	ci left: 8.109980e-02	ci right 8.173627e-02	k: 231226	n:2840000
KS ci ratio: 1.411562e-01	ci left: 2.523145e-04	ci right 2.909700e-04	k: 770	n:2840000
KIAA0182   2840000 perm   3335 sec   (852 perm/sec)   p_kst 2.711268e-04   p_cons 8.141761e-02   p_joint 8.028169e-05

Joint ci ratio: 2.584667e-01	ci left: 7.028054e-05	ci right 9.145909e-05	k: 229	n:2850000
Cons ci ratio: 7.799993e-03	ci left: 8.108944e-02	ci right 8.172475e-02	k: 232009	n:2850000
KS ci ratio: 1.407914e-01	ci left: 2.527832e-04	ci right 2.914020e-04	k: 774	n:2850000
KIAA0182   2850000 perm   3356 sec   (849 perm/sec)   p_kst 2.715789e-04   p_cons 8.140667e-02   p_joint 8.035088e-05

Joint ci ratio: 2.584667e-01	ci left: 7.003480e-05	ci right 9.113930e-05	k: 229	n:2860000
Cons ci ratio: 7.787001e-03	ci left: 8.107740e-02	ci right 8.171156e-02	k: 232787	n:2860000
KS ci ratio: 1.406101e-01	ci left: 2.525740e-04	ci right 2.911070e-04	k: 776	n:2860000
KIAA0182   2860000 perm   3378 sec   (847 perm/sec)   p_kst 2.713287e-04   p_cons 8.139406e-02   p_joint 8.006993e-05

Joint ci ratio: 2.584667e-01	ci left: 6.979078e-05	ci right 9.082175e-05	k: 229	n:2870000
Cons ci ratio: 7.773368e-03	ci left: 8.107902e-02	ci right 8.171207e-02	k: 233604	n:2870000
KS ci ratio: 1.404295e-01	ci left: 2.523663e-04	ci right 2.908141e-04	k: 778	n:2870000
KIAA0182   2870000 perm   3400 sec   (844 perm/sec)   p_kst 2.710801e-04   p_cons 8.139512e-02   p_joint 7.979094e-05

Joint ci ratio: 2.584668e-01	ci left: 6.954845e-05	ci right 9.050640e-05	k: 229	n:2880000
Cons ci ratio: 7.761212e-03	ci left: 8.105359e-02	ci right 8.168545e-02	k: 234343	n:2880000
KS ci ratio: 1.401599e-01	ci left: 2.524951e-04	ci right 2.908825e-04	k: 781	n:2880000
KIAA0182   2880000 perm   3422 sec   (842 perm/sec)   p_kst 2.711806e-04   p_cons 8.136910e-02   p_joint 7.951389e-05

Joint ci ratio: 2.579067e-01	ci left: 6.963143e-05	ci right 9.056159e-05	k: 230	n:2890000
Cons ci ratio: 7.747426e-03	ci left: 8.106080e-02	ci right 8.169159e-02	k: 235176	n:2890000
KS ci ratio: 1.398027e-01	ci left: 2.529571e-04	ci right 2.913085e-04	k: 785	n:2890000
KIAA0182   2890000 perm   3444 sec   (839 perm/sec)   p_kst 2.716263e-04   p_cons 8.137578e-02   p_joint 7.958478e-05

Joint ci ratio: 2.579067e-01	ci left: 6.939132e-05	ci right 9.024931e-05	k: 230	n:2900000
Cons ci ratio: 7.734124e-03	ci left: 8.106005e-02	ci right 8.168975e-02	k: 235986	n:2900000
KS ci ratio: 1.398028e-01	ci left: 2.520848e-04	ci right 2.903040e-04	k: 785	n:2900000
KIAA0182   2900000 perm   3466 sec   (837 perm/sec)   p_kst 2.706897e-04   p_cons 8.137448e-02   p_joint 7.931034e-05

Joint ci ratio: 2.573503e-01	ci left: 6.947431e-05	ci right 9.030496e-05	k: 231	n:2910000
Cons ci ratio: 7.720713e-03	ci left: 8.106274e-02	ci right 8.169136e-02	k: 236806	n:2910000
KS ci ratio: 1.391843e-01	ci left: 2.535401e-04	ci right 2.917958e-04	k: 792	n:2910000
KIAA0182   2910000 perm   3489 sec   (834 perm/sec)   p_kst 2.721649e-04   p_cons 8.137663e-02   p_joint 7.938144e-05

Joint ci ratio: 2.567974e-01	ci left: 6.955679e-05	ci right 9.036018e-05	k: 232	n:2920000
Cons ci ratio: 7.707336e-03	ci left: 8.106609e-02	ci right 8.169364e-02	k: 237628	n:2920000
KS ci ratio: 1.390091e-01	ci left: 2.533329e-04	ci right 2.915052e-04	k: 794	n:2920000
KIAA0182   2920000 perm   3511 sec   (832 perm/sec)   p_kst 2.719178e-04   p_cons 8.137945e-02   p_joint 7.945205e-05

Joint ci ratio: 2.567975e-01	ci left: 6.931939e-05	ci right 9.005178e-05	k: 232	n:2930000
Cons ci ratio: 7.694696e-03	ci left: 8.105648e-02	ci right 8.168292e-02	k: 238412	n:2930000
KS ci ratio: 1.386607e-01	ci left: 2.537860e-04	ci right 2.919229e-04	k: 798	n:2930000
KIAA0182   2930000 perm   3534 sec   (829 perm/sec)   p_kst 2.723549e-04   p_cons 8.136928e-02   p_joint 7.918089e-05

Joint ci ratio: 2.562482e-01	ci left: 6.940188e-05	ci right 9.010744e-05	k: 233	n:2940000
Cons ci ratio: 7.681995e-03	ci left: 8.104930e-02	ci right 8.167465e-02	k: 239203	n:2940000
KS ci ratio: 1.381429e-01	ci left: 2.548930e-04	ci right 2.930414e-04	k: 804	n:2940000
KIAA0182   2940000 perm   3556 sec   (827 perm/sec)   p_kst 2.734694e-04   p_cons 8.136156e-02   p_joint 7.925170e-05

Joint ci ratio: 2.557024e-01	ci left: 6.948386e-05	ci right 9.016268e-05	k: 234	n:2950000
Cons ci ratio: 7.669531e-03	ci left: 8.103879e-02	ci right 8.166304e-02	k: 239984	n:2950000
KS ci ratio: 1.381430e-01	ci left: 2.540289e-04	ci right 2.920480e-04	k: 804	n:2950000
KIAA0182   2950000 perm   3579 sec   (824 perm/sec)   p_kst 2.725424e-04   p_cons 8.135051e-02   p_joint 7.932203e-05

Joint ci ratio: 2.551600e-01	ci left: 6.956533e-05	ci right 9.021749e-05	k: 235	n:2960000
Cons ci ratio: 7.656798e-03	ci left: 8.103477e-02	ci right 8.165794e-02	k: 240784	n:2960000
KS ci ratio: 1.379717e-01	ci left: 2.538231e-04	ci right 2.917604e-04	k: 806	n:2960000
KIAA0182   2960000 perm   3601 sec   (822 perm/sec)   p_kst 2.722973e-04   p_cons 8.134595e-02   p_joint 7.939189e-05

Joint ci ratio: 2.540856e-01	ci left: 6.996153e-05	ci right 9.063001e-05	k: 237	n:2970000
Cons ci ratio: 7.643337e-03	ci left: 8.104623e-02	ci right 8.166839e-02	k: 241630	n:2970000
KS ci ratio: 1.376310e-01	ci left: 2.542688e-04	ci right 2.921712e-04	k: 810	n:2970000
KIAA0182   2970000 perm   3624 sec   (820 perm/sec)   p_kst 2.727273e-04   p_cons 8.135690e-02   p_joint 7.979798e-05

Joint ci ratio: 2.535535e-01	ci left: 7.004099e-05	ci right 9.068275e-05	k: 238	n:2980000
Cons ci ratio: 7.630512e-03	ci left: 8.104656e-02	ci right 8.166768e-02	k: 242443	n:2980000
KS ci ratio: 1.373771e-01	ci left: 2.543877e-04	ci right 2.922321e-04	k: 813	n:2980000
KIAA0182   2980000 perm   3647 sec   (817 perm/sec)   p_kst 2.728188e-04   p_cons 8.135671e-02   p_joint 7.986577e-05

Joint ci ratio: 2.524992e-01	ci left: 7.043322e-05	ci right 9.109069e-05	k: 240	n:2990000
Cons ci ratio: 7.616507e-03	ci left: 8.107126e-02	ci right 8.169142e-02	k: 243329	n:2990000
KS ci ratio: 1.372929e-01	ci left: 2.538598e-04	ci right 2.916007e-04	k: 814	n:2990000
KIAA0182   2990000 perm   3669 sec   (815 perm/sec)   p_kst 2.722408e-04   p_cons 8.138094e-02   p_joint 8.026756e-05

Joint ci ratio: 2.519769e-01	ci left: 7.051071e-05	ci right 9.114141e-05	k: 241	n:3000000
Cons ci ratio: 7.603409e-03	ci left: 8.107949e-02	ci right 8.169865e-02	k: 244166	n:3000000
KS ci ratio: 1.369572e-01	ci left: 2.543012e-04	ci right 2.920077e-04	k: 818	n:3000000
KIAA0182   3000000 perm   3692 sec   (813 perm/sec)   p_kst 2.726667e-04   p_cons 8.138867e-02   p_joint 8.033333e-05

Joint ci ratio: 2.499198e-01	ci left: 7.152179e-05	ci right 9.225091e-05	k: 245	n:3010000
Cons ci ratio: 7.590918e-03	ci left: 8.107706e-02	ci right 8.169517e-02	k: 244971	n:3010000
KS ci ratio: 1.364582e-01	ci left: 2.553815e-04	ci right 2.930991e-04	k: 824	n:3010000
KIAA0182   3010000 perm   3714 sec   (810 perm/sec)   p_kst 2.737542e-04   p_cons 8.138571e-02   p_joint 8.139535e-05

Joint ci ratio: 2.494134e-01	ci left: 7.159537e-05	ci right 9.229725e-05	k: 246	n:3020000
Cons ci ratio: 7.579210e-03	ci left: 8.106043e-02	ci right 8.167746e-02	k: 245733	n:3020000
KS ci ratio: 1.362931e-01	ci left: 2.551756e-04	ci right 2.928134e-04	k: 826	n:3020000
KIAA0182   3020000 perm   3737 sec   (808 perm/sec)   p_kst 2.735099e-04   p_cons 8.136854e-02   p_joint 8.145695e-05

Joint ci ratio: 2.479123e-01	ci left: 7.228749e-05	ci right 9.304430e-05	k: 249	n:3030000
Cons ci ratio: 7.566905e-03	ci left: 8.105676e-02	ci right 8.167275e-02	k: 246534	n:3030000
KS ci ratio: 1.360465e-01	ci left: 2.552898e-04	ci right 2.928708e-04	k: 829	n:3030000
KIAA0182   3030000 perm   3760 sec   (806 perm/sec)   p_kst 2.735974e-04   p_cons 8.136436e-02   p_joint 8.217822e-05

Joint ci ratio: 2.469265e-01	ci left: 7.266681e-05	ci right 9.343683e-05	k: 251	n:3040000
Cons ci ratio: 7.553928e-03	ci left: 8.106756e-02	ci right 8.168258e-02	k: 247379	n:3040000
KS ci ratio: 1.357199e-01	ci left: 2.557211e-04	ci right 2.932679e-04	k: 833	n:3040000
KIAA0182   3040000 perm   3783 sec   (804 perm/sec)   p_kst 2.740132e-04   p_cons 8.137467e-02   p_joint 8.256579e-05

Joint ci ratio: 2.464380e-01	ci left: 7.273616e-05	ci right 9.347858e-05	k: 252	n:3050000
Cons ci ratio: 7.541481e-03	ci left: 8.106913e-02	ci right 8.168314e-02	k: 248196	n:3050000
KS ci ratio: 1.355574e-01	ci left: 2.555161e-04	ci right 2.929844e-04	k: 835	n:3050000
KIAA0182   3050000 perm   3806 sec   (801 perm/sec)   p_kst 2.737705e-04   p_cons 8.137574e-02   p_joint 8.262295e-05

Joint ci ratio: 2.454697e-01	ci left: 7.311178e-05	ci right 9.386689e-05	k: 254	n:3060000
Cons ci ratio: 7.528650e-03	ci left: 8.107950e-02	ci right 8.169254e-02	k: 249040	n:3060000
KS ci ratio: 1.355575e-01	ci left: 2.546811e-04	ci right 2.920269e-04	k: 835	n:3060000
KIAA0182   3060000 perm   3829 sec   (799 perm/sec)   p_kst 2.728758e-04   p_cons 8.138562e-02   p_joint 8.300654e-05

Joint ci ratio: 2.454697e-01	ci left: 7.287363e-05	ci right 9.356114e-05	k: 254	n:3070000
Cons ci ratio: 7.516671e-03	ci left: 8.107419e-02	ci right 8.168621e-02	k: 249836	n:3070000
KS ci ratio: 1.352343e-01	ci left: 2.551103e-04	ci right 2.924227e-04	k: 839	n:3070000
KIAA0182   3070000 perm   3853 sec   (797 perm/sec)   p_kst 2.732899e-04   p_cons 8.137980e-02   p_joint 8.273616e-05

Joint ci ratio: 2.454697e-01	ci left: 7.263703e-05	ci right 9.325737e-05	k: 254	n:3080000
Cons ci ratio: 7.504162e-03	ci left: 8.108058e-02	ci right 8.169163e-02	k: 250668	n:3080000
KS ci ratio: 1.349935e-01	ci left: 2.552231e-04	ci right 2.924802e-04	k: 842	n:3080000
KIAA0182   3080000 perm   3876 sec   (795 perm/sec)   p_kst 2.733766e-04   p_cons 8.138571e-02   p_joint 8.246753e-05

Joint ci ratio: 2.454698e-01	ci left: 7.240195e-05	ci right 9.295556e-05	k: 254	n:3090000
Cons ci ratio: 7.491910e-03	ci left: 8.108306e-02	ci right 8.169313e-02	k: 251488	n:3090000
KS ci ratio: 1.349135e-01	ci left: 2.547099e-04	ci right 2.918682e-04	k: 843	n:3090000
KIAA0182   3090000 perm   3899 sec   (792 perm/sec)   p_kst 2.728155e-04   p_cons 8.138770e-02   p_joint 8.220065e-05

Joint ci ratio: 2.454698e-01	ci left: 7.216840e-05	ci right 9.265571e-05	k: 254	n:3100000
Cons ci ratio: 7.480347e-03	ci left: 8.107297e-02	ci right 8.168201e-02	k: 252269	n:3100000
KS ci ratio: 1.348337e-01	ci left: 2.541999e-04	ci right 2.912602e-04	k: 844	n:3100000
KIAA0182   3100000 perm   3923 sec   (790 perm/sec)   p_kst 2.722581e-04   p_cons 8.137710e-02   p_joint 8.193548e-05

Joint ci ratio: 2.454698e-01	ci left: 7.193635e-05	ci right 9.235778e-05	k: 254	n:3110000
Cons ci ratio: 7.468099e-03	ci left: 8.107770e-02	ci right 8.168578e-02	k: 253096	n:3110000
KS ci ratio: 1.345950e-01	ci left: 2.543147e-04	ci right 2.913208e-04	k: 847	n:3110000
KIAA0182   3110000 perm   3946 sec   (788 perm/sec)   p_kst 2.723473e-04   p_cons 8.138135e-02   p_joint 8.167203e-05

Joint ci ratio: 2.449899e-01	ci left: 7.200660e-05	ci right 9.240193e-05	k: 255	n:3120000
Cons ci ratio: 7.456566e-03	ci left: 8.106929e-02	ci right 8.167636e-02	k: 253882	n:3120000
KS ci ratio: 1.342786e-01	ci left: 2.547385e-04	ci right 2.917122e-04	k: 851	n:3120000
KIAA0182   3120000 perm   3970 sec   (786 perm/sec)   p_kst 2.727564e-04   p_cons 8.137244e-02   p_joint 8.173077e-05

Joint ci ratio: 2.445128e-01	ci left: 7.207644e-05	ci right 9.244576e-05	k: 256	n:3130000
Cons ci ratio: 7.444625e-03	ci left: 8.107018e-02	ci right 8.167628e-02	k: 254697	n:3130000
KS ci ratio: 1.338082e-01	ci left: 2.557773e-04	ci right 2.927614e-04	k: 857	n:3130000
KIAA0182   3130000 perm   3993 sec   (784 perm/sec)   p_kst 2.738019e-04   p_cons 8.137284e-02   p_joint 8.178914e-05

Joint ci ratio: 2.440385e-01	ci left: 7.214588e-05	ci right 9.248928e-05	k: 257	n:3140000
Cons ci ratio: 7.432931e-03	ci left: 8.106725e-02	ci right 8.167237e-02	k: 255500	n:3140000
KS ci ratio: 1.333427e-01	ci left: 2.568097e-04	ci right 2.938036e-04	k: 863	n:3140000
KIAA0182   3140000 perm   4017 sec   (782 perm/sec)   p_kst 2.748408e-04   p_cons 8.136943e-02   p_joint 8.184713e-05

Joint ci ratio: 2.440385e-01	ci left: 7.191684e-05	ci right 9.219566e-05	k: 257	n:3150000
Cons ci ratio: 7.420976e-03	ci left: 8.107068e-02	ci right 8.167485e-02	k: 256323	n:3150000
KS ci ratio: 1.333428e-01	ci left: 2.559944e-04	ci right 2.928709e-04	k: 863	n:3150000
KIAA0182   3150000 perm   4040 sec   (780 perm/sec)   p_kst 2.739683e-04   p_cons 8.137238e-02   p_joint 8.158730e-05

Joint ci ratio: 2.430980e-01	ci left: 7.228354e-05	ci right 9.257536e-05	k: 259	n:3160000
Cons ci ratio: 7.409331e-03	ci left: 8.106903e-02	ci right 8.167224e-02	k: 257130	n:3160000
KS ci ratio: 1.328821e-01	ci left: 2.570198e-04	ci right 2.939060e-04	k: 869	n:3160000
KIAA0182   3160000 perm   4064 sec   (778 perm/sec)   p_kst 2.750000e-04   p_cons 8.137025e-02   p_joint 8.196203e-05

Joint ci ratio: 2.421684e-01	ci left: 7.264808e-05	ci right 9.295252e-05	k: 261	n:3170000
Cons ci ratio: 7.396959e-03	ci left: 8.108314e-02	ci right 8.168544e-02	k: 257987	n:3170000
KS ci ratio: 1.327297e-01	ci left: 2.568190e-04	ci right 2.936308e-04	k: 871	n:3170000
KIAA0182   3170000 perm   4088 sec   (775 perm/sec)   p_kst 2.747634e-04   p_cons 8.138391e-02   p_joint 8.233438e-05

Joint ci ratio: 2.421684e-01	ci left: 7.241963e-05	ci right 9.266022e-05	k: 261	n:3180000
Cons ci ratio: 7.385534e-03	ci left: 8.107927e-02	ci right 8.168061e-02	k: 258787	n:3180000
KS ci ratio: 1.325777e-01	ci left: 2.566195e-04	ci right 2.933572e-04	k: 873	n:3180000
KIAA0182   3180000 perm   4112 sec   (773 perm/sec)   p_kst 2.745283e-04   p_cons 8.137956e-02   p_joint 8.207547e-05

Joint ci ratio: 2.417076e-01	ci left: 7.248708e-05	ci right 9.270220e-05	k: 262	n:3190000
Cons ci ratio: 7.374704e-03	ci left: 8.106447e-02	ci right 8.166481e-02	k: 259552	n:3190000
KS ci ratio: 1.323508e-01	ci left: 2.567243e-04	ci right 2.934092e-04	k: 876	n:3190000
KIAA0182   3190000 perm   4136 sec   (771 perm/sec)   p_kst 2.746082e-04   p_cons 8.136426e-02   p_joint 8.213166e-05

Joint ci ratio: 2.417076e-01	ci left: 7.226056e-05	ci right 9.241250e-05	k: 262	n:3200000
Cons ci ratio: 7.363166e-03	ci left: 8.106505e-02	ci right 8.166446e-02	k: 260366	n:3200000
KS ci ratio: 1.321250e-01	ci left: 2.568285e-04	ci right 2.934607e-04	k: 879	n:3200000
KIAA0182   3200000 perm   4160 sec   (769 perm/sec)   p_kst 2.746875e-04   p_cons 8.136438e-02   p_joint 8.187500e-05

Joint ci ratio: 2.417076e-01	ci left: 7.203545e-05	ci right 9.212462e-05	k: 262	n:3210000
Cons ci ratio: 7.352035e-03	ci left: 8.105848e-02	ci right 8.165692e-02	k: 261157	n:3210000
KS ci ratio: 1.319751e-01	ci left: 2.566309e-04	ci right 2.931902e-04	k: 881	n:3210000
KIAA0182   3210000 perm   4184 sec   (767 perm/sec)   p_kst 2.744548e-04   p_cons 8.135732e-02   p_joint 8.161994e-05

Joint ci ratio: 2.407937e-01	ci left: 7.239531e-05	ci right 9.249710e-05	k: 264	n:3220000
Cons ci ratio: 7.340787e-03	ci left: 8.105535e-02	ci right 8.165285e-02	k: 261959	n:3220000
KS ci ratio: 1.316026e-01	ci left: 2.573355e-04	ci right 2.938836e-04	k: 886	n:3220000
KIAA0182   3220000 perm   4208 sec   (765 perm/sec)   p_kst 2.751553e-04   p_cons 8.135373e-02   p_joint 8.198758e-05

Joint ci ratio: 2.398902e-01	ci left: 7.275309e-05	ci right 9.286715e-05	k: 266	n:3230000
Cons ci ratio: 7.329499e-03	ci left: 8.105410e-02	ci right 8.165067e-02	k: 262767	n:3230000
KS ci ratio: 1.312332e-01	ci left: 2.580359e-04	ci right 2.945726e-04	k: 891	n:3230000
KIAA0182   3230000 perm   4232 sec   (763 perm/sec)   p_kst 2.758514e-04   p_cons 8.135201e-02   p_joint 8.235294e-05

Joint ci ratio: 2.398902e-01	ci left: 7.252854e-05	ci right 9.258052e-05	k: 266	n:3240000
Cons ci ratio: 7.318141e-03	ci left: 8.105533e-02	ci right 8.165098e-02	k: 263583	n:3240000
KS ci ratio: 1.311597e-01	ci left: 2.575380e-04	ci right 2.939822e-04	k: 892	n:3240000
KIAA0182   3240000 perm   4256 sec   (761 perm/sec)   p_kst 2.753086e-04   p_cons 8.135278e-02   p_joint 8.209877e-05

Joint ci ratio: 2.389967e-01	ci left: 7.288385e-05	ci right 9.294789e-05	k: 268	n:3250000
Cons ci ratio: 7.306717e-03	ci left: 8.105900e-02	ci right 8.165374e-02	k: 264407	n:3250000
KS ci ratio: 1.308669e-01	ci left: 2.579360e-04	ci right 2.943487e-04	k: 896	n:3250000
KIAA0182   3250000 perm   4281 sec   (759 perm/sec)   p_kst 2.756923e-04   p_cons 8.135600e-02   p_joint 8.246154e-05

Joint ci ratio: 2.385537e-01	ci left: 7.294867e-05	ci right 9.298784e-05	k: 269	n:3260000
Cons ci ratio: 7.295420e-03	ci left: 8.106112e-02	ci right 8.165496e-02	k: 265226	n:3260000
KS ci ratio: 1.307941e-01	ci left: 2.574415e-04	ci right 2.937626e-04	k: 897	n:3260000
KIAA0182   3260000 perm   4306 sec   (757 perm/sec)   p_kst 2.751534e-04   p_cons 8.135767e-02   p_joint 8.251534e-05

Joint ci ratio: 2.385537e-01	ci left: 7.272559e-05	ci right 9.270347e-05	k: 269	n:3270000
Cons ci ratio: 7.283609e-03	ci left: 8.107483e-02	ci right 8.166780e-02	k: 266083	n:3270000
KS ci ratio: 1.305037e-01	ci left: 2.578375e-04	ci right 2.941274e-04	k: 901	n:3270000
KIAA0182   3270000 perm   4330 sec   (755 perm/sec)   p_kst 2.755352e-04   p_cons 8.137095e-02   p_joint 8.226300e-05

Joint ci ratio: 2.385537e-01	ci left: 7.250386e-05	ci right 9.242084e-05	k: 269	n:3280000
Cons ci ratio: 7.272642e-03	ci left: 8.107233e-02	ci right 8.166439e-02	k: 266887	n:3280000
KS ci ratio: 1.301434e-01	ci left: 2.585261e-04	ci right 2.948047e-04	k: 906	n:3280000
KIAA0182   3280000 perm   4355 sec   (753 perm/sec)   p_kst 2.762195e-04   p_cons 8.136799e-02   p_joint 8.201220e-05

Joint ci ratio: 2.385538e-01	ci left: 7.228349e-05	ci right 9.213993e-05	k: 269	n:3290000
Cons ci ratio: 7.262359e-03	ci left: 8.105679e-02	ci right 8.164790e-02	k: 267648	n:3290000
KS ci ratio: 1.297150e-01	ci left: 2.595047e-04	ci right 2.957916e-04	k: 912	n:3290000
KIAA0182   3290000 perm   4380 sec   (751 perm/sec)   p_kst 2.772036e-04   p_cons 8.135198e-02   p_joint 8.176292e-05

Joint ci ratio: 2.385538e-01	ci left: 7.206444e-05	ci right 9.186072e-05	k: 269	n:3300000
Cons ci ratio: 7.251399e-03	ci left: 8.105618e-02	ci right 8.164638e-02	k: 268458	n:3300000
KS ci ratio: 1.296441e-01	ci left: 2.590116e-04	ci right 2.952081e-04	k: 913	n:3300000
KIAA0182   3300000 perm   4405 sec   (749 perm/sec)   p_kst 2.766667e-04   p_cons 8.135091e-02   p_joint 8.151515e-05

Joint ci ratio: 2.376751e-01	ci left: 7.241491e-05	ci right 9.222340e-05	k: 271	n:3310000
Cons ci ratio: 7.240137e-03	ci left: 8.106280e-02	ci right 8.165213e-02	k: 269292	n:3310000
KS ci ratio: 1.295025e-01	ci left: 2.588137e-04	ci right 2.949401e-04	k: 915	n:3310000
KIAA0182   3310000 perm   4430 sec   (747 perm/sec)   p_kst 2.764350e-04   p_cons 8.135710e-02   p_joint 8.187311e-05

Joint ci ratio: 2.372394e-01	ci left: 7.248008e-05	ci right 9.226471e-05	k: 272	n:3320000
Cons ci ratio: 7.229219e-03	ci left: 8.106337e-02	ci right 8.165181e-02	k: 270106	n:3320000
KS ci ratio: 1.294319e-01	ci left: 2.583256e-04	ci right 2.943627e-04	k: 916	n:3320000
KIAA0182   3320000 perm   4456 sec   (745 perm/sec)   p_kst 2.759036e-04   p_cons 8.135723e-02   p_joint 8.192771e-05

Joint ci ratio: 2.368061e-01	ci left: 7.254489e-05	ci right 9.230574e-05	k: 273	n:3330000
Cons ci ratio: 7.218350e-03	ci left: 8.106394e-02	ci right 8.165150e-02	k: 270920	n:3330000
KS ci ratio: 1.292207e-01	ci left: 2.584216e-04	ci right 2.944087e-04	k: 919	n:3330000
KIAA0182   3330000 perm   4481 sec   (743 perm/sec)   p_kst 2.759760e-04   p_cons 8.135736e-02   p_joint 8.198198e-05

Joint ci ratio: 2.368061e-01	ci left: 7.232769e-05	ci right 9.202938e-05	k: 273	n:3340000
Cons ci ratio: 7.206865e-03	ci left: 8.107826e-02	ci right 8.166498e-02	k: 271780	n:3340000
KS ci ratio: 1.291506e-01	ci left: 2.579376e-04	ci right 2.938363e-04	k: 920	n:3340000
KIAA0182   3340000 perm   4506 sec   (741 perm/sec)   p_kst 2.754491e-04   p_cons 8.137126e-02   p_joint 8.173653e-05

Joint ci ratio: 2.368061e-01	ci left: 7.211179e-05	ci right 9.175466e-05	k: 273	n:3350000
Cons ci ratio: 7.195694e-03	ci left: 8.108713e-02	ci right 8.167300e-02	k: 272622	n:3350000
KS ci ratio: 1.291506e-01	ci left: 2.571676e-04	ci right 2.929592e-04	k: 920	n:3350000
KIAA0182   3350000 perm   4531 sec   (739 perm/sec)   p_kst 2.746269e-04   p_cons 8.137970e-02   p_joint 8.149254e-05

Joint ci ratio: 2.368062e-01	ci left: 7.189717e-05	ci right 9.148159e-05	k: 273	n:3360000
Cons ci ratio: 7.185648e-03	ci left: 8.107366e-02	ci right 8.165861e-02	k: 273389	n:3360000
KS ci ratio: 1.288014e-01	ci left: 2.578423e-04	ci right 2.936234e-04	k: 925	n:3360000
KIAA0182   3360000 perm   4556 sec   (737 perm/sec)   p_kst 2.752976e-04   p_cons 8.136577e-02   p_joint 8.125000e-05

Joint ci ratio: 2.363752e-01	ci left: 7.196297e-05	ci right 9.152442e-05	k: 274	n:3370000
Cons ci ratio: 7.174518e-03	ci left: 8.108367e-02	ci right 8.166779e-02	k: 274235	n:3370000
KS ci ratio: 1.287320e-01	ci left: 2.573644e-04	ci right 2.930584e-04	k: 926	n:3370000
KIAA0182   3370000 perm   4581 sec   (736 perm/sec)   p_kst 2.747774e-04   p_cons 8.137537e-02   p_joint 8.130564e-05

Joint ci ratio: 2.363752e-01	ci left: 7.175006e-05	ci right 9.125364e-05	k: 274	n:3380000
Cons ci ratio: 7.164092e-03	ci left: 8.108004e-02	ci right 8.166328e-02	k: 275035	n:3380000
KS ci ratio: 1.287320e-01	ci left: 2.566029e-04	ci right 2.921914e-04	k: 926	n:3380000
KIAA0182   3380000 perm   4607 sec   (734 perm/sec)   p_kst 2.739645e-04   p_cons 8.137130e-02   p_joint 8.106509e-05

Joint ci ratio: 2.363753e-01	ci left: 7.153841e-05	ci right 9.098445e-05	k: 274	n:3390000
Cons ci ratio: 7.153246e-03	ci left: 8.108615e-02	ci right 8.166855e-02	k: 275868	n:3390000
KS ci ratio: 1.284551e-01	ci left: 2.569880e-04	ci right 2.925473e-04	k: 930	n:3390000
KIAA0182   3390000 perm   4632 sec   (732 perm/sec)   p_kst 2.743363e-04   p_cons 8.137699e-02   p_joint 8.082596e-05

Joint ci ratio: 2.363753e-01	ci left: 7.132800e-05	ci right 9.071685e-05	k: 274	n:3400000
Cons ci ratio: 7.142589e-03	ci left: 8.108929e-02	ci right 8.167084e-02	k: 276691	n:3400000
KS ci ratio: 1.281801e-01	ci left: 2.573709e-04	ci right 2.929011e-04	k: 934	n:3400000
KIAA0182   3400000 perm   4658 sec   (730 perm/sec)   p_kst 2.747059e-04   p_cons 8.137971e-02   p_joint 8.058824e-05

Joint ci ratio: 2.355204e-01	ci left: 7.167067e-05	ci right 9.107194e-05	k: 276	n:3410000
Cons ci ratio: 7.131882e-03	ci left: 8.109446e-02	ci right 8.167517e-02	k: 277521	n:3410000
KS ci ratio: 1.279067e-01	ci left: 2.577515e-04	ci right 2.932527e-04	k: 938	n:3410000
KIAA0182   3410000 perm   4684 sec   (728 perm/sec)   p_kst 2.750733e-04   p_cons 8.138446e-02   p_joint 8.093842e-05

Joint ci ratio: 2.350964e-01	ci left: 7.173627e-05	ci right 9.111525e-05	k: 277	n:3420000
Cons ci ratio: 7.120679e-03	ci left: 8.111098e-02	ci right 8.169089e-02	k: 278390	n:3420000
KS ci ratio: 1.279068e-01	ci left: 2.569979e-04	ci right 2.923953e-04	k: 938	n:3420000
KIAA0182   3420000 perm   4710 sec   (726 perm/sec)   p_kst 2.742690e-04   p_cons 8.140058e-02   p_joint 8.099415e-05

Joint ci ratio: 2.350964e-01	ci left: 7.152712e-05	ci right 9.084961e-05	k: 277	n:3430000
Cons ci ratio: 7.111221e-03	ci left: 8.109190e-02	ci right 8.167090e-02	k: 279137	n:3430000
KS ci ratio: 1.278388e-01	ci left: 2.565308e-04	ci right 2.918437e-04	k: 939	n:3430000
KIAA0182   3430000 perm   4736 sec   (724 perm/sec)   p_kst 2.737609e-04   p_cons 8.138105e-02   p_joint 8.075802e-05

Joint ci ratio: 2.350964e-01	ci left: 7.131919e-05	ci right 9.058551e-05	k: 277	n:3440000
Cons ci ratio: 7.100778e-03	ci left: 8.109441e-02	ci right 8.167257e-02	k: 279958	n:3440000
KS ci ratio: 1.278388e-01	ci left: 2.557851e-04	ci right 2.909953e-04	k: 939	n:3440000
KIAA0182   3440000 perm   4761 sec   (722 perm/sec)   p_kst 2.729651e-04   p_cons 8.138314e-02   p_joint 8.052326e-05

Joint ci ratio: 2.350965e-01	ci left: 7.111247e-05	ci right 9.032295e-05	k: 277	n:3450000
Cons ci ratio: 7.090711e-03	ci left: 8.108996e-02	ci right 8.166727e-02	k: 280755	n:3450000
KS ci ratio: 1.277709e-01	ci left: 2.553243e-04	ci right 2.904509e-04	k: 940	n:3450000
KIAA0182   3450000 perm   4787 sec   (721 perm/sec)   p_kst 2.724638e-04   p_cons 8.137826e-02   p_joint 8.028986e-05

Joint ci ratio: 2.350965e-01	ci left: 7.090694e-05	ci right 9.006190e-05	k: 277	n:3460000
Cons ci ratio: 7.080878e-03	ci left: 8.108149e-02	ci right 8.165794e-02	k: 281538	n:3460000
KS ci ratio: 1.275677e-01	ci left: 2.554257e-04	ci right 2.905062e-04	k: 943	n:3460000
KIAA0182   3460000 perm   4813 sec   (719 perm/sec)   p_kst 2.725434e-04   p_cons 8.136936e-02   p_joint 8.005780e-05

Joint ci ratio: 2.346748e-01	ci left: 7.097383e-05	ci right 9.010747e-05	k: 278	n:3470000
Cons ci ratio: 7.070623e-03	ci left: 8.108286e-02	ci right 8.165848e-02	k: 282355	n:3470000
KS ci ratio: 1.274328e-01	ci left: 2.552476e-04	ci right 2.902638e-04	k: 945	n:3470000
KIAA0182   3470000 perm   4838 sec   (717 perm/sec)   p_kst 2.723343e-04   p_cons 8.137032e-02   p_joint 8.011527e-05

Joint ci ratio: 2.346748e-01	ci left: 7.076988e-05	ci right 8.984854e-05	k: 278	n:3480000
Cons ci ratio: 7.060833e-03	ci left: 8.107532e-02	ci right 8.165009e-02	k: 283141	n:3480000
KS ci ratio: 1.274329e-01	ci left: 2.545141e-04	ci right 2.894297e-04	k: 945	n:3480000
KIAA0182   3480000 perm   4864 sec   (715 perm/sec)   p_kst 2.715517e-04   p_cons 8.136236e-02   p_joint 7.988506e-05

Joint ci ratio: 2.346748e-01	ci left: 7.056710e-05	ci right 8.959109e-05	k: 278	n:3490000
Cons ci ratio: 7.051407e-03	ci left: 8.106097e-02	ci right 8.163486e-02	k: 283903	n:3490000
KS ci ratio: 1.272984e-01	ci left: 2.543397e-04	ci right 2.891917e-04	k: 947	n:3490000
KIAA0182   3490000 perm   4890 sec   (714 perm/sec)   p_kst 2.713467e-04   p_cons 8.134756e-02   p_joint 7.965616e-05

Joint ci ratio: 2.342554e-01	ci left: 7.063441e-05	ci right 8.963759e-05	k: 279	n:3500000
Cons ci ratio: 7.041158e-03	ci left: 8.106495e-02	ci right 8.163803e-02	k: 284729	n:3500000
KS ci ratio: 1.270974e-01	ci left: 2.544428e-04	ci right 2.892498e-04	k: 950	n:3500000
KIAA0182   3500000 perm   4916 sec   (712 perm/sec)   p_kst 2.714286e-04   p_cons 8.135114e-02   p_joint 7.971429e-05

Joint ci ratio: 2.342554e-01	ci left: 7.043317e-05	ci right 8.938221e-05	k: 279	n:3510000
Cons ci ratio: 7.030927e-03	ci left: 8.106948e-02	ci right 8.164176e-02	k: 285557	n:3510000
KS ci ratio: 1.270307e-01	ci left: 2.539938e-04	ci right 2.887197e-04	k: 951	n:3510000
KIAA0182   3510000 perm   4943 sec   (710 perm/sec)   p_kst 2.709402e-04   p_cons 8.135527e-02   p_joint 7.948718e-05

Joint ci ratio: 2.338382e-01	ci left: 7.050051e-05	ci right 8.942900e-05	k: 280	n:3520000
Cons ci ratio: 7.021274e-03	ci left: 8.106264e-02	ci right 8.163408e-02	k: 286345	n:3520000
KS ci ratio: 1.268310e-01	ci left: 2.540974e-04	ci right 2.887788e-04	k: 954	n:3520000
KIAA0182   3520000 perm   4969 sec   (708 perm/sec)   p_kst 2.710227e-04   p_cons 8.134801e-02   p_joint 7.954545e-05

Joint ci ratio: 2.330104e-01	ci left: 7.083423e-05	ci right 8.977531e-05	k: 282	n:3530000
Cons ci ratio: 7.011474e-03	ci left: 8.105979e-02	ci right 8.163041e-02	k: 287147	n:3530000
KS ci ratio: 1.265002e-01	ci left: 2.547491e-04	ci right 2.894220e-04	k: 959	n:3530000
KIAA0182   3530000 perm   4995 sec   (707 perm/sec)   p_kst 2.716714e-04   p_cons 8.134476e-02   p_joint 7.988669e-05

Joint ci ratio: 2.325998e-01	ci left: 7.090015e-05	ci right 8.982063e-05	k: 283	n:3540000
Cons ci ratio: 7.001305e-03	ci left: 8.106571e-02	ci right 8.163554e-02	k: 287980	n:3540000
KS ci ratio: 1.261720e-01	ci left: 2.553973e-04	ci right 2.900615e-04	k: 964	n:3540000
KIAA0182   3540000 perm   5021 sec   (705 perm/sec)   p_kst 2.723164e-04   p_cons 8.135028e-02   p_joint 7.994350e-05

Joint ci ratio: 2.321914e-01	ci left: 7.096572e-05	ci right 8.986568e-05	k: 284	n:3550000
Cons ci ratio: 6.991246e-03	ci left: 8.107019e-02	ci right 8.163923e-02	k: 288808	n:3550000
KS ci ratio: 1.260415e-01	ci left: 2.552235e-04	ci right 2.898255e-04	k: 966	n:3550000
KIAA0182   3550000 perm   5048 sec   (703 perm/sec)   p_kst 2.721127e-04   p_cons 8.135437e-02   p_joint 8.000000e-05

Joint ci ratio: 2.317851e-01	ci left: 7.103095e-05	ci right 8.991044e-05	k: 285	n:3560000
Cons ci ratio: 6.981572e-03	ci left: 8.106735e-02	ci right 8.163558e-02	k: 289610	n:3560000
KS ci ratio: 1.257169e-01	ci left: 2.558668e-04	ci right 2.904601e-04	k: 971	n:3560000
KIAA0182   3560000 perm   5075 sec   (702 perm/sec)   p_kst 2.727528e-04   p_cons 8.135112e-02   p_joint 8.005618e-05

Joint ci ratio: 2.309789e-01	ci left: 7.135974e-05	ci right 9.025123e-05	k: 287	n:3570000
Cons ci ratio: 6.972172e-03	ci left: 8.105949e-02	ci right 8.162690e-02	k: 290394	n:3570000
KS ci ratio: 1.254590e-01	ci left: 2.562354e-04	ci right 2.908021e-04	k: 975	n:3570000
KIAA0182   3570000 perm   5101 sec   (700 perm/sec)   p_kst 2.731092e-04   p_cons 8.134286e-02   p_joint 8.039216e-05

Joint ci ratio: 2.293913e-01	ci left: 7.221331e-05	ci right 9.118076e-05	k: 291	n:3580000
Cons ci ratio: 6.962941e-03	ci left: 8.104889e-02	ci right 8.161547e-02	k: 291168	n:3580000
KS ci ratio: 1.250114e-01	ci left: 2.574137e-04	ci right 2.920064e-04	k: 982	n:3580000
KIAA0182   3580000 perm   5128 sec   (698 perm/sec)   p_kst 2.743017e-04   p_cons 8.133184e-02   p_joint 8.128492e-05

Joint ci ratio: 2.286096e-01	ci left: 7.253731e-05	ci right 9.151578e-05	k: 293	n:3590000
Cons ci ratio: 6.953915e-03	ci left: 8.103474e-02	ci right 8.160048e-02	k: 291929	n:3590000
KS ci ratio: 1.248211e-01	ci left: 2.575062e-04	ci right 2.920547e-04	k: 985	n:3590000
KIAA0182   3590000 perm   5156 sec   (696 perm/sec)   p_kst 2.743733e-04   p_cons 8.131727e-02   p_joint 8.161560e-05

Joint ci ratio: 2.278360e-01	ci left: 7.285961e-05	ci right 9.184883e-05	k: 295	n:3600000
Cons ci ratio: 6.944627e-03	ci left: 8.102704e-02	ci right 8.159197e-02	k: 292713	n:3600000
KS ci ratio: 1.244430e-01	ci left: 2.584056e-04	ci right 2.929621e-04	k: 991	n:3600000
KIAA0182   3600000 perm   5183 sec   (695 perm/sec)   p_kst 2.752778e-04   p_cons 8.130917e-02   p_joint 8.194444e-05

Joint ci ratio: 2.274521e-01	ci left: 7.291900e-05	ci right 9.188718e-05	k: 296	n:3610000
Cons ci ratio: 6.934784e-03	ci left: 8.103211e-02	ci right 8.159627e-02	k: 293543	n:3610000
KS ci ratio: 1.241928e-01	ci left: 2.587634e-04	ci right 2.932930e-04	k: 995	n:3610000
KIAA0182   3610000 perm   5210 sec   (693 perm/sec)   p_kst 2.756233e-04   p_cons 8.131385e-02   p_joint 8.199446e-05

Joint ci ratio: 2.274521e-01	ci left: 7.271756e-05	ci right 9.163335e-05	k: 296	n:3620000
Cons ci ratio: 6.925534e-03	ci left: 8.102529e-02	ci right 8.158864e-02	k: 294330	n:3620000
KS ci ratio: 1.240683e-01	ci left: 2.585839e-04	ci right 2.930524e-04	k: 997	n:3620000
KIAA0182   3620000 perm   5237 sec   (691 perm/sec)   p_kst 2.754144e-04   p_cons 8.130663e-02   p_joint 8.176796e-05

Joint ci ratio: 2.274521e-01	ci left: 7.251724e-05	ci right 9.138092e-05	k: 296	n:3630000
Cons ci ratio: 6.915389e-03	ci left: 8.103858e-02	ci right 8.160120e-02	k: 295190	n:3630000
KS ci ratio: 1.237586e-01	ci left: 2.592063e-04	ci right 2.936652e-04	k: 1002	n:3630000
KIAA0182   3630000 perm   5264 sec   (690 perm/sec)   p_kst 2.760331e-04   p_cons 8.131956e-02   p_joint 8.154270e-05

Joint ci ratio: 2.266901e-01	ci left: 7.283621e-05	ci right 9.171052e-05	k: 298	n:3640000
Cons ci ratio: 6.906356e-03	ci left: 8.102877e-02	ci right 8.159058e-02	k: 295966	n:3640000
KS ci ratio: 1.236355e-01	ci left: 2.590266e-04	ci right 2.934249e-04	k: 1004	n:3640000
KIAA0182   3640000 perm   5291 sec   (688 perm/sec)   p_kst 2.758242e-04   p_cons 8.130934e-02   p_joint 8.186813e-05

Joint ci ratio: 2.259357e-01	ci left: 7.315355e-05	ci right 9.203821e-05	k: 300	n:3650000
Cons ci ratio: 6.897080e-03	ci left: 8.102502e-02	ci right 8.158605e-02	k: 296764	n:3650000
KS ci ratio: 1.234513e-01	ci left: 2.591135e-04	ci right 2.934683e-04	k: 1007	n:3650000
KIAA0182   3650000 perm   5319 sec   (686 perm/sec)   p_kst 2.758904e-04   p_cons 8.130521e-02   p_joint 8.219178e-05

Joint ci ratio: 2.259357e-01	ci left: 7.295367e-05	ci right 9.178674e-05	k: 300	n:3660000
Cons ci ratio: 6.887425e-03	ci left: 8.103030e-02	ci right 8.159058e-02	k: 297595	n:3660000
KS ci ratio: 1.233902e-01	ci left: 2.586703e-04	ci right 2.929481e-04	k: 1008	n:3660000
KIAA0182   3660000 perm   5346 sec   (685 perm/sec)   p_kst 2.754098e-04   p_cons 8.131011e-02   p_joint 8.196721e-05

Joint ci ratio: 2.259357e-01	ci left: 7.275489e-05	ci right 9.153664e-05	k: 300	n:3670000
Cons ci ratio: 6.879003e-03	ci left: 8.100971e-02	ci right 8.156916e-02	k: 298331	n:3670000
KS ci ratio: 1.232071e-01	ci left: 2.587577e-04	ci right 2.929925e-04	k: 1011	n:3670000
KIAA0182   3670000 perm   5374 sec   (683 perm/sec)   p_kst 2.754768e-04   p_cons 8.128910e-02   p_joint 8.174387e-05

Joint ci ratio: 2.255614e-01	ci left: 7.281356e-05	ci right 9.157498e-05	k: 301	n:3680000
Cons ci ratio: 6.869911e-03	ci left: 8.100442e-02	ci right 8.156309e-02	k: 299123	n:3680000
KS ci ratio: 1.229039e-01	ci left: 2.593715e-04	ci right 2.935968e-04	k: 1016	n:3680000
KIAA0182   3680000 perm   5401 sec   (681 perm/sec)   p_kst 2.760870e-04   p_cons 8.128342e-02   p_joint 8.179348e-05

Joint ci ratio: 2.244492e-01	ci left: 7.338342e-05	ci right 9.218556e-05	k: 304	n:3690000
Cons ci ratio: 6.860531e-03	ci left: 8.100619e-02	ci right 8.156411e-02	k: 299941	n:3690000
KS ci ratio: 1.227832e-01	ci left: 2.591939e-04	ci right 2.933598e-04	k: 1018	n:3690000
KIAA0182   3690000 perm   5429 sec   (680 perm/sec)   p_kst 2.758808e-04   p_cons 8.128482e-02   p_joint 8.238482e-05

Joint ci ratio: 2.240822e-01	ci left: 7.344018e-05	ci right 9.222184e-05	k: 305	n:3700000
Cons ci ratio: 6.850955e-03	ci left: 8.101309e-02	ci right 8.157027e-02	k: 300778	n:3700000
KS ci ratio: 1.225429e-01	ci left: 2.595413e-04	ci right 2.936812e-04	k: 1022	n:3700000
KIAA0182   3700000 perm   5456 sec   (678 perm/sec)   p_kst 2.762162e-04   p_cons 8.129135e-02   p_joint 8.243243e-05

Joint ci ratio: 2.240822e-01	ci left: 7.324222e-05	ci right 9.197326e-05	k: 305	n:3710000
Cons ci ratio: 6.841863e-03	ci left: 8.101026e-02	ci right 8.156668e-02	k: 301579	n:3710000
KS ci ratio: 1.225429e-01	ci left: 2.588417e-04	ci right 2.928896e-04	k: 1022	n:3710000
KIAA0182   3710000 perm   5483 sec   (677 perm/sec)   p_kst 2.754717e-04   p_cons 8.128814e-02   p_joint 8.221024e-05

Joint ci ratio: 2.237170e-01	ci left: 7.329908e-05	ci right 9.200989e-05	k: 306	n:3720000
Cons ci ratio: 6.833077e-03	ci left: 8.100154e-02	ci right 8.155718e-02	k: 302358	n:3720000
KS ci ratio: 1.224233e-01	ci left: 2.586671e-04	ci right 2.926564e-04	k: 1024	n:3720000
KIAA0182   3720000 perm   5511 sec   (675 perm/sec)   p_kst 2.752688e-04   p_cons 8.127903e-02   p_joint 8.225806e-05

Joint ci ratio: 2.226318e-01	ci left: 7.386190e-05	ci right 9.261239e-05	k: 309	n:3730000
Cons ci ratio: 6.824019e-03	ci left: 8.099955e-02	ci right 8.155445e-02	k: 303162	n:3730000
KS ci ratio: 1.222446e-01	ci left: 2.587533e-04	ci right 2.927007e-04	k: 1027	n:3730000
KIAA0182   3730000 perm   5539 sec   (673 perm/sec)   p_kst 2.753351e-04   p_cons 8.127668e-02   p_joint 8.284182e-05

Joint ci ratio: 2.226318e-01	ci left: 7.366441e-05	ci right 9.236476e-05	k: 309	n:3740000
Cons ci ratio: 6.814497e-03	ci left: 8.100853e-02	ci right 8.156271e-02	k: 304007	n:3740000
KS ci ratio: 1.221852e-01	ci left: 2.583206e-04	ci right 2.921936e-04	k: 1028	n:3740000
KIAA0182   3740000 perm   5567 sec   (672 perm/sec)   p_kst 2.748663e-04   p_cons 8.128529e-02   p_joint 8.262032e-05

Joint ci ratio: 2.226318e-01	ci left: 7.346797e-05	ci right 9.211846e-05	k: 309	n:3750000
Cons ci ratio: 6.805294e-03	ci left: 8.101133e-02	ci right 8.156478e-02	k: 304829	n:3750000
KS ci ratio: 1.221259e-01	ci left: 2.578903e-04	ci right 2.916892e-04	k: 1029	n:3750000
KIAA0182   3750000 perm   5595 sec   (670 perm/sec)   p_kst 2.744000e-04   p_cons 8.128773e-02   p_joint 8.240000e-05

Joint ci ratio: 2.222736e-01	ci left: 7.352371e-05	ci right 9.215421e-05	k: 310	n:3760000
Cons ci ratio: 6.795825e-03	ci left: 8.102076e-02	ci right 8.157350e-02	k: 305676	n:3760000
KS ci ratio: 1.220075e-01	ci left: 2.577201e-04	ci right 2.914616e-04	k: 1031	n:3760000
KIAA0182   3760000 perm   5623 sec   (669 perm/sec)   p_kst 2.742021e-04   p_cons 8.129681e-02   p_joint 8.244681e-05

Joint ci ratio: 2.222736e-01	ci left: 7.332869e-05	ci right 9.190978e-05	k: 310	n:3770000
Cons ci ratio: 6.786818e-03	ci left: 8.102087e-02	ci right 8.157287e-02	k: 306488	n:3770000
KS ci ratio: 1.218306e-01	ci left: 2.578079e-04	ci right 2.915085e-04	k: 1034	n:3770000
KIAA0182   3770000 perm   5651 sec   (667 perm/sec)   p_kst 2.742706e-04   p_cons 8.129655e-02   p_joint 8.222812e-05

Joint ci ratio: 2.219171e-01	ci left: 7.338453e-05	ci right 9.194587e-05	k: 311	n:3780000
Cons ci ratio: 6.777582e-03	ci left: 8.102679e-02	ci right 8.157808e-02	k: 307322	n:3780000
KS ci ratio: 1.216544e-01	ci left: 2.578954e-04	ci right 2.915551e-04	k: 1037	n:3780000
KIAA0182   3780000 perm   5679 sec   (666 perm/sec)   p_kst 2.743386e-04   p_cons 8.130212e-02   p_joint 8.227513e-05

Joint ci ratio: 2.215623e-01	ci left: 7.344010e-05	ci right 9.198175e-05	k: 312	n:3790000
Cons ci ratio: 6.768814e-03	ci left: 8.102320e-02	ci right 8.157375e-02	k: 308120	n:3790000
KS ci ratio: 1.214789e-01	ci left: 2.579824e-04	ci right 2.916015e-04	k: 1040	n:3790000
KIAA0182   3790000 perm   5708 sec   (664 perm/sec)   p_kst 2.744063e-04   p_cons 8.129815e-02   p_joint 8.232190e-05

Joint ci ratio: 2.212092e-01	ci left: 7.349541e-05	ci right 9.201742e-05	k: 313	n:3800000
Cons ci ratio: 6.759902e-03	ci left: 8.102357e-02	ci right 8.157339e-02	k: 308933	n:3800000
KS ci ratio: 1.210148e-01	ci left: 2.593449e-04	ci right 2.930032e-04	k: 1048	n:3800000
KIAA0182   3800000 perm   5736 sec   (662 perm/sec)   p_kst 2.757895e-04   p_cons 8.129816e-02   p_joint 8.236842e-05

Joint ci ratio: 2.212093e-01	ci left: 7.330251e-05	ci right 9.177591e-05	k: 313	n:3810000
Cons ci ratio: 6.751404e-03	ci left: 8.101555e-02	ci right 8.156462e-02	k: 309714	n:3810000
KS ci ratio: 1.208421e-01	ci left: 2.594278e-04	ci right 2.930453e-04	k: 1051	n:3810000
KIAA0182   3810000 perm   5764 sec   (661 perm/sec)   p_kst 2.758530e-04   p_cons 8.128976e-02   p_joint 8.215223e-05

Joint ci ratio: 2.205081e-01	ci left: 7.360521e-05	ci right 9.208813e-05	k: 315	n:3820000
Cons ci ratio: 6.742324e-03	ci left: 8.102116e-02	ci right 8.156953e-02	k: 310547	n:3820000
KS ci ratio: 1.208421e-01	ci left: 2.587487e-04	ci right 2.922782e-04	k: 1051	n:3820000
KIAA0182   3820000 perm   5793 sec   (659 perm/sec)   p_kst 2.751309e-04   p_cons 8.129503e-02   p_joint 8.246073e-05

Joint ci ratio: 2.205081e-01	ci left: 7.341303e-05	ci right 9.184769e-05	k: 315	n:3830000
Cons ci ratio: 6.733787e-03	ci left: 8.101553e-02	ci right 8.156317e-02	k: 311337	n:3830000
KS ci ratio: 1.207274e-01	ci left: 2.585795e-04	ci right 2.920530e-04	k: 1053	n:3830000
KIAA0182   3830000 perm   5821 sec   (658 perm/sec)   p_kst 2.749347e-04   p_cons 8.128903e-02   p_joint 8.224543e-05

Joint ci ratio: 2.205081e-01	ci left: 7.322185e-05	ci right 9.160851e-05	k: 315	n:3840000
Cons ci ratio: 6.725023e-03	ci left: 8.101566e-02	ci right 8.156258e-02	k: 312149	n:3840000
KS ci ratio: 1.205560e-01	ci left: 2.586638e-04	ci right 2.920973e-04	k: 1056	n:3840000
KIAA0182   3840000 perm   5850 sec   (656 perm/sec)   p_kst 2.750000e-04   p_cons 8.128880e-02   p_joint 8.203125e-05

Joint ci ratio: 2.205081e-01	ci left: 7.303166e-05	ci right 9.137056e-05	k: 315	n:3850000
Cons ci ratio: 6.716680e-03	ci left: 8.100722e-02	ci right 8.155341e-02	k: 312928	n:3850000
KS ci ratio: 1.204990e-01	ci left: 2.582439e-04	ci right 2.916062e-04	k: 1057	n:3850000
KIAA0182   3850000 perm   5879 sec   (655 perm/sec)   p_kst 2.745455e-04   p_cons 8.128000e-02   p_joint 8.181818e-05

Joint ci ratio: 2.205082e-01	ci left: 7.284246e-05	ci right 9.113385e-05	k: 315	n:3860000
Cons ci ratio: 6.707622e-03	ci left: 8.101539e-02	ci right 8.156089e-02	k: 313771	n:3860000
KS ci ratio: 1.203285e-01	ci left: 2.583286e-04	ci right 2.916513e-04	k: 1060	n:3860000
KIAA0182   3860000 perm   5907 sec   (653 perm/sec)   p_kst 2.746114e-04   p_cons 8.128782e-02   p_joint 8.160622e-05

Joint ci ratio: 2.858884e-01	ci left: 4.164283e-05	ci right 5.576412e-05	k: 187	n:3870000
Cons ci ratio: 6.698752e-03	ci left: 8.102016e-02	ci right 8.156496e-02	k: 314601	n:3870000
KS ci ratio: 1.202719e-01	ci left: 2.579117e-04	ci right 2.911639e-04	k: 1061	n:3870000
KIAA0182   3870000 perm   5936 sec   (652 perm/sec)   p_kst 2.741602e-04   p_cons 8.129225e-02   p_joint 4.832041e-05

Joint ci ratio: 2.858884e-01	ci left: 4.153551e-05	ci right 5.562040e-05	k: 187	n:3880000
Cons ci ratio: 6.690321e-03	ci left: 8.101590e-02	ci right 8.155999e-02	k: 315396	n:3880000
KS ci ratio: 1.201024e-01	ci left: 2.579970e-04	ci right 2.912099e-04	k: 1064	n:3880000
KIAA0182   3880000 perm   5965 sec   (650 perm/sec)   p_kst 2.742268e-04   p_cons 8.128763e-02   p_joint 4.819588e-05

Joint ci ratio: 2.858884e-01	ci left: 4.142873e-05	ci right 5.547741e-05	k: 187	n:3890000
Cons ci ratio: 6.681738e-03	ci left: 8.101576e-02	ci right 8.155915e-02	k: 316207	n:3890000
KS ci ratio: 1.199898e-01	ci left: 2.578324e-04	ci right 2.909908e-04	k: 1066	n:3890000
KIAA0182   3890000 perm   5994 sec   (649 perm/sec)   p_kst 2.740360e-04   p_cons 8.128715e-02   p_joint 4.807198e-05

Joint ci ratio: 2.851311e-01	ci left: 4.156055e-05	ci right 5.560988e-05	k: 188	n:3900000
Cons ci ratio: 6.672523e-03	ci left: 8.103048e-02	ci right 8.157322e-02	k: 317076	n:3900000
KS ci ratio: 1.198214e-01	ci left: 2.579175e-04	ci right 2.910370e-04	k: 1069	n:3900000
KIAA0182   3900000 perm   6023 sec   (648 perm/sec)   p_kst 2.741026e-04   p_cons 8.130154e-02   p_joint 4.820513e-05

Joint ci ratio: 2.836343e-01	ci left: 4.192929e-05	ci right 5.601555e-05	k: 190	n:3910000
Cons ci ratio: 6.663997e-03	ci left: 8.103057e-02	ci right 8.157261e-02	k: 317888	n:3910000
KS ci ratio: 1.194313e-01	ci left: 2.589946e-04	ci right 2.921365e-04	k: 1076	n:3910000
KIAA0182   3910000 perm   6052 sec   (646 perm/sec)   p_kst 2.751918e-04   p_cons 8.130128e-02   p_joint 4.859335e-05

Joint ci ratio: 2.836343e-01	ci left: 4.182233e-05	ci right 5.587265e-05	k: 190	n:3920000
Cons ci ratio: 6.655355e-03	ci left: 8.103397e-02	ci right 8.157532e-02	k: 318713	n:3920000
KS ci ratio: 1.192654e-01	ci left: 2.590763e-04	ci right 2.921794e-04	k: 1079	n:3920000
KIAA0182   3920000 perm   6081 sec   (645 perm/sec)   p_kst 2.752551e-04   p_cons 8.130434e-02   p_joint 4.846939e-05

Joint ci ratio: 2.836343e-01	ci left: 4.171591e-05	ci right 5.573048e-05	k: 190	n:3930000
Cons ci ratio: 6.646124e-03	ci left: 8.105132e-02	ci right 8.159204e-02	k: 319593	n:3930000
KS ci ratio: 1.189354e-01	ci left: 2.598984e-04	ci right 2.930081e-04	k: 1085	n:3930000
KIAA0182   3930000 perm   6111 sec   (643 perm/sec)   p_kst 2.760814e-04   p_cons 8.132137e-02   p_joint 4.834606e-05

Joint ci ratio: 2.836343e-01	ci left: 4.161004e-05	ci right 5.558904e-05	k: 190	n:3940000
Cons ci ratio: 6.637924e-03	ci left: 8.104629e-02	ci right 8.158630e-02	k: 320385	n:3940000
KS ci ratio: 1.188260e-01	ci left: 2.597312e-04	ci right 2.927871e-04	k: 1087	n:3940000
KIAA0182   3940000 perm   6140 sec   (642 perm/sec)   p_kst 2.758883e-04   p_cons 8.131599e-02   p_joint 4.822335e-05

Joint ci ratio: 2.836344e-01	ci left: 4.150469e-05	ci right 5.544830e-05	k: 190	n:3950000
Cons ci ratio: 6.629563e-03	ci left: 8.104558e-02	ci right 8.158491e-02	k: 321194	n:3950000
KS ci ratio: 1.187170e-01	ci left: 2.595650e-04	ci right 2.925672e-04	k: 1089	n:3950000
KIAA0182   3950000 perm   6169 sec   (640 perm/sec)   p_kst 2.756962e-04   p_cons 8.131494e-02   p_joint 4.810127e-05

Joint ci ratio: 2.836344e-01	ci left: 4.139988e-05	ci right 5.530828e-05	k: 190	n:3960000
Cons ci ratio: 6.621558e-03	ci left: 8.103756e-02	ci right 8.157618e-02	k: 321974	n:3960000
KS ci ratio: 1.186626e-01	ci left: 2.591545e-04	ci right 2.920885e-04	k: 1090	n:3960000
KIAA0182   3960000 perm   6199 sec   (639 perm/sec)   p_kst 2.752525e-04   p_cons 8.130657e-02   p_joint 4.797980e-05

Joint ci ratio: 2.828948e-01	ci left: 4.152960e-05	ci right 5.543870e-05	k: 191	n:3970000
Cons ci ratio: 6.613314e-03	ci left: 8.103562e-02	ci right 8.157355e-02	k: 322778	n:3970000
KS ci ratio: 1.184456e-01	ci left: 2.594794e-04	ci right 2.923901e-04	k: 1094	n:3970000
KIAA0182   3970000 perm   6228 sec   (637 perm/sec)   p_kst 2.755668e-04   p_cons 8.130428e-02   p_joint 4.811083e-05

Joint ci ratio: 2.170998e-01	ci left: 7.302109e-05	ci right 9.103613e-05	k: 325	n:3980000
Cons ci ratio: 6.604946e-03	ci left: 8.103720e-02	ci right 8.157446e-02	k: 323596	n:3980000
KS ci ratio: 1.183916e-01	ci left: 2.590713e-04	ci right 2.919142e-04	k: 1095	n:3980000
KIAA0182   3980000 perm   6258 sec   (636 perm/sec)   p_kst 2.751256e-04   p_cons 8.130553e-02   p_joint 8.165829e-05

Joint ci ratio: 2.167676e-01	ci left: 7.307509e-05	ci right 9.107219e-05	k: 326	n:3990000
Cons ci ratio: 6.597273e-03	ci left: 8.102376e-02	ci right 8.156031e-02	k: 324354	n:3990000
KS ci ratio: 1.182299e-01	ci left: 2.591516e-04	ci right 2.919567e-04	k: 1098	n:3990000
KIAA0182   3990000 perm   6287 sec   (635 perm/sec)   p_kst 2.751880e-04   p_cons 8.129173e-02   p_joint 8.170426e-05

Joint ci ratio: 2.164369e-01	ci left: 7.312884e-05	ci right 9.110805e-05	k: 327	n:4000000
Cons ci ratio: 6.589175e-03	ci left: 8.102062e-02	ci right 8.155648e-02	k: 325153	n:4000000
KS ci ratio: 1.182299e-01	ci left: 2.585037e-04	ci right 2.912268e-04	k: 1098	n:4000000
KIAA0182   4000000 perm   6317 sec   (633 perm/sec)   p_kst 2.745000e-04   p_cons 8.128825e-02   p_joint 8.175000e-05

Joint ci ratio: 2.164369e-01	ci left: 7.294647e-05	ci right 9.088085e-05	k: 327	n:4010000
Cons ci ratio: 6.580997e-03	ci left: 8.101999e-02	ci right 8.155518e-02	k: 325962	n:4010000
KS ci ratio: 1.180154e-01	ci left: 2.588271e-04	ci right 2.915275e-04	k: 1102	n:4010000
KIAA0182   4010000 perm   6346 sec   (632 perm/sec)   p_kst 2.748130e-04   p_cons 8.128728e-02   p_joint 8.154613e-05

Joint ci ratio: 2.161077e-01	ci left: 7.300030e-05	ci right 9.091699e-05	k: 328	n:4020000
Cons ci ratio: 6.572148e-03	ci left: 8.103526e-02	ci right 8.156983e-02	k: 326835	n:4020000
KS ci ratio: 1.178019e-01	ci left: 2.591489e-04	ci right 2.918267e-04	k: 1106	n:4020000
KIAA0182   4020000 perm   6376 sec   (631 perm/sec)   p_kst 2.751244e-04   p_cons 8.130224e-02   p_joint 8.159204e-05

Joint ci ratio: 2.157800e-01	ci left: 7.305388e-05	ci right 9.095293e-05	k: 329	n:4030000
Cons ci ratio: 6.564436e-03	ci left: 8.102542e-02	ci right 8.155930e-02	k: 327607	n:4030000
KS ci ratio: 1.177488e-01	ci left: 2.587467e-04	ci right 2.913580e-04	k: 1107	n:4030000
KIAA0182   4030000 perm   6405 sec   (629 perm/sec)   p_kst 2.746898e-04   p_cons 8.129206e-02   p_joint 8.163772e-05

Joint ci ratio: 2.154538e-01	ci left: 7.310721e-05	ci right 9.098867e-05	k: 330	n:4040000
Cons ci ratio: 6.556339e-03	ci left: 8.102503e-02	ci right 8.155824e-02	k: 328417	n:4040000
KS ci ratio: 1.176427e-01	ci left: 2.585867e-04	ci right 2.911464e-04	k: 1109	n:4040000
KIAA0182   4040000 perm   6435 sec   (628 perm/sec)   p_kst 2.745050e-04   p_cons 8.129134e-02   p_joint 8.168317e-05

Joint ci ratio: 2.148058e-01	ci left: 7.339392e-05	ci right 9.128439e-05	k: 332	n:4050000
Cons ci ratio: 6.548542e-03	ci left: 8.101848e-02	ci right 8.155101e-02	k: 329202	n:4050000
KS ci ratio: 1.173786e-01	ci left: 2.591465e-04	ci right 2.916984e-04	k: 1114	n:4050000
KIAA0182   4050000 perm   6465 sec   (626 perm/sec)   p_kst 2.750617e-04   p_cons 8.128444e-02   p_joint 8.197531e-05

Joint ci ratio: 2.148058e-01	ci left: 7.321315e-05	ci right 9.105956e-05	k: 332	n:4060000
Cons ci ratio: 6.540622e-03	ci left: 8.101540e-02	ci right 8.154727e-02	k: 330001	n:4060000
KS ci ratio: 1.172210e-01	ci left: 2.592255e-04	ci right 2.917405e-04	k: 1117	n:4060000
KIAA0182   4060000 perm   6495 sec   (625 perm/sec)   p_kst 2.751232e-04   p_cons 8.128103e-02   p_joint 8.177340e-05

Joint ci ratio: 2.148059e-01	ci left: 7.303326e-05	ci right 9.083582e-05	k: 332	n:4070000
Cons ci ratio: 6.532773e-03	ci left: 8.101136e-02	ci right 8.154256e-02	k: 330796	n:4070000
KS ci ratio: 1.171686e-01	ci left: 2.588271e-04	ci right 2.912766e-04	k: 1118	n:4070000
KIAA0182   4070000 perm   6525 sec   (624 perm/sec)   p_kst 2.746929e-04   p_cons 8.127666e-02   p_joint 8.157248e-05

Joint ci ratio: 2.148059e-01	ci left: 7.285426e-05	ci right 9.061319e-05	k: 332	n:4080000
Cons ci ratio: 6.524717e-03	ci left: 8.101272e-02	ci right 8.154327e-02	k: 331613	n:4080000
KS ci ratio: 1.170119e-01	ci left: 2.589064e-04	ci right 2.913195e-04	k: 1121	n:4080000
KIAA0182   4080000 perm   6555 sec   (622 perm/sec)   p_kst 2.747549e-04   p_cons 8.127770e-02   p_joint 8.137255e-05

Joint ci ratio: 2.148059e-01	ci left: 7.267613e-05	ci right 9.039164e-05	k: 332	n:4090000
Cons ci ratio: 6.516893e-03	ci left: 8.100943e-02	ci right 8.153932e-02	k: 332411	n:4090000
KS ci ratio: 1.168038e-01	ci left: 2.592228e-04	ci right 2.916138e-04	k: 1125	n:4090000
KIAA0182   4090000 perm   6585 sec   (621 perm/sec)   p_kst 2.750611e-04   p_cons 8.127408e-02   p_joint 8.117359e-05

Joint ci ratio: 2.138447e-01	ci left: 7.319130e-05	ci right 9.094209e-05	k: 335	n:4100000
Cons ci ratio: 6.509278e-03	ci left: 8.100203e-02	ci right 8.153125e-02	k: 333192	n:4100000
KS ci ratio: 1.165453e-01	ci left: 2.597745e-04	ci right 2.921576e-04	k: 1130	n:4100000
KIAA0182   4100000 perm   6616 sec   (620 perm/sec)   p_kst 2.756098e-04   p_cons 8.126634e-02   p_joint 8.170732e-05

Joint ci ratio: 2.138448e-01	ci left: 7.301322e-05	ci right 9.072082e-05	k: 335	n:4110000
Cons ci ratio: 6.501394e-03	ci left: 8.100146e-02	ci right 8.153003e-02	k: 334001	n:4110000
KS ci ratio: 1.163910e-01	ci left: 2.598511e-04	ci right 2.921980e-04	k: 1133	n:4110000
KIAA0182   4110000 perm   6646 sec   (618 perm/sec)   p_kst 2.756691e-04   p_cons 8.126545e-02   p_joint 8.150852e-05

Joint ci ratio: 2.135272e-01	ci left: 7.306574e-05	ci right 9.075632e-05	k: 336	n:4120000
Cons ci ratio: 6.493200e-03	ci left: 8.100865e-02	ci right 8.153660e-02	k: 334842	n:4120000
KS ci ratio: 1.162886e-01	ci left: 2.596917e-04	ci right 2.919883e-04	k: 1135	n:4120000
KIAA0182   4120000 perm   6676 sec   (617 perm/sec)   p_kst 2.754854e-04   p_cons 8.127233e-02   p_joint 8.155340e-05

Joint ci ratio: 2.135273e-01	ci left: 7.288882e-05	ci right 9.053657e-05	k: 336	n:4130000
Cons ci ratio: 6.485289e-03	ci left: 8.101000e-02	ci right 8.153732e-02	k: 335659	n:4130000
KS ci ratio: 1.162886e-01	ci left: 2.590629e-04	ci right 2.912813e-04	k: 1135	n:4130000
KIAA0182   4130000 perm   6706 sec   (616 perm/sec)   p_kst 2.748184e-04   p_cons 8.127337e-02   p_joint 8.135593e-05

Joint ci ratio: 2.128964e-01	ci left: 7.317006e-05	ci right 9.082673e-05	k: 338	n:4140000
Cons ci ratio: 6.477480e-03	ci left: 8.100966e-02	ci right 8.153634e-02	k: 336469	n:4140000
KS ci ratio: 1.161864e-01	ci left: 2.589062e-04	ci right 2.910749e-04	k: 1137	n:4140000
KIAA0182   4140000 perm   6737 sec   (615 perm/sec)   p_kst 2.746377e-04   p_cons 8.127271e-02   p_joint 8.164251e-05

Joint ci ratio: 2.125831e-01	ci left: 7.322187e-05	ci right 9.086165e-05	k: 339	n:4150000
Cons ci ratio: 6.469669e-03	ci left: 8.101004e-02	ci right 8.153608e-02	k: 337282	n:4150000
KS ci ratio: 1.160844e-01	ci left: 2.587502e-04	ci right 2.908694e-04	k: 1139	n:4150000
KIAA0182   4150000 perm   6768 sec   (613 perm/sec)   p_kst 2.744578e-04   p_cons 8.127277e-02   p_joint 8.168675e-05

Joint ci ratio: 2.122712e-01	ci left: 7.327346e-05	ci right 9.089639e-05	k: 340	n:4160000
Cons ci ratio: 6.462312e-03	ci left: 8.100058e-02	ci right 8.152596e-02	k: 338054	n:4160000
KS ci ratio: 1.159827e-01	ci left: 2.585951e-04	ci right 2.906649e-04	k: 1141	n:4160000
KIAA0182   4160000 perm   6798 sec   (612 perm/sec)   p_kst 2.742788e-04   p_cons 8.126298e-02   p_joint 8.173077e-05

Joint ci ratio: 2.119606e-01	ci left: 7.332481e-05	ci right 9.093094e-05	k: 341	n:4170000
Cons ci ratio: 6.454244e-03	ci left: 8.100817e-02	ci right 8.153294e-02	k: 338897	n:4170000
KS ci ratio: 1.158307e-01	ci left: 2.586735e-04	ci right 2.907082e-04	k: 1144	n:4170000
KIAA0182   4170000 perm   6829 sec   (611 perm/sec)   p_kst 2.743405e-04   p_cons 8.127026e-02   p_joint 8.177458e-05

Joint ci ratio: 2.113435e-01	ci left: 7.360250e-05	ci right 9.121719e-05	k: 343	n:4180000
Cons ci ratio: 6.446340e-03	ci left: 8.101262e-02	ci right 8.153677e-02	k: 339727	n:4180000
KS ci ratio: 1.156792e-01	ci left: 2.587516e-04	ci right 2.907512e-04	k: 1147	n:4180000
KIAA0182   4180000 perm   6860 sec   (609 perm/sec)   p_kst 2.744019e-04   p_cons 8.127440e-02   p_joint 8.205742e-05

Joint ci ratio: 2.113435e-01	ci left: 7.342684e-05	ci right 9.099949e-05	k: 343	n:4190000
Cons ci ratio: 6.438671e-03	ci left: 8.101227e-02	ci right 8.153580e-02	k: 340537	n:4190000
KS ci ratio: 1.156793e-01	ci left: 2.581340e-04	ci right 2.900573e-04	k: 1147	n:4190000
KIAA0182   4190000 perm   6891 sec   (608 perm/sec)   p_kst 2.737470e-04   p_cons 8.127375e-02   p_joint 8.186158e-05

Joint ci ratio: 2.110370e-01	ci left: 7.347752e-05	ci right 9.103349e-05	k: 344	n:4200000
Cons ci ratio: 6.430568e-03	ci left: 8.102263e-02	ci right 8.154556e-02	k: 341392	n:4200000
KS ci ratio: 1.155787e-01	ci left: 2.579819e-04	ci right 2.898566e-04	k: 1149	n:4200000
KIAA0182   4200000 perm   6921 sec   (607 perm/sec)   p_kst 2.735714e-04   p_cons 8.128381e-02   p_joint 8.190476e-05

Joint ci ratio: 2.110370e-01	ci left: 7.330298e-05	ci right 9.081726e-05	k: 344	n:4210000
Cons ci ratio: 6.423139e-03	ci left: 8.101800e-02	ci right 8.154030e-02	k: 342184	n:4210000
KS ci ratio: 1.154282e-01	ci left: 2.580611e-04	ci right 2.899013e-04	k: 1152	n:4210000
KIAA0182   4210000 perm   6953 sec   (606 perm/sec)   p_kst 2.736342e-04   p_cons 8.127886e-02   p_joint 8.171021e-05

Joint ci ratio: 2.110371e-01	ci left: 7.312928e-05	ci right 9.060206e-05	k: 344	n:4220000
Cons ci ratio: 6.415787e-03	ci left: 8.101221e-02	ci right 8.153386e-02	k: 342971	n:4220000
KS ci ratio: 1.153282e-01	ci left: 2.579098e-04	ci right 2.897019e-04	k: 1154	n:4220000
KIAA0182   4220000 perm   6984 sec   (604 perm/sec)   p_kst 2.734597e-04   p_cons 8.127275e-02   p_joint 8.151659e-05

Joint ci ratio: 2.110371e-01	ci left: 7.295640e-05	ci right 9.038787e-05	k: 344	n:4230000
Cons ci ratio: 6.408166e-03	ci left: 8.101329e-02	ci right 8.153433e-02	k: 343787	n:4230000
KS ci ratio: 1.152783e-01	ci left: 2.575297e-04	ci right 2.892603e-04	k: 1155	n:4230000
KIAA0182   4230000 perm   7016 sec   (603 perm/sec)   p_kst 2.730496e-04   p_cons 8.127352e-02   p_joint 8.132388e-05

Joint ci ratio: 2.110371e-01	ci left: 7.278433e-05	ci right 9.017469e-05	k: 344	n:4240000
Cons ci ratio: 6.400753e-03	ci left: 8.101012e-02	ci right 8.153054e-02	k: 344585	n:4240000
KS ci ratio: 1.152285e-01	ci left: 2.571513e-04	ci right 2.888207e-04	k: 1156	n:4240000
KIAA0182   4240000 perm   7048 sec   (602 perm/sec)   p_kst 2.726415e-04   p_cons 8.127005e-02   p_joint 8.113208e-05

Joint ci ratio: 2.110371e-01	ci left: 7.261307e-05	ci right 8.996252e-05	k: 344	n:4250000
Cons ci ratio: 6.392853e-03	ci left: 8.101896e-02	ci right 8.153879e-02	k: 345434	n:4250000
KS ci ratio: 1.151291e-01	ci left: 2.570033e-04	ci right 2.886253e-04	k: 1158	n:4250000
KIAA0182   4250000 perm   7079 sec   (600 perm/sec)   p_kst 2.724706e-04   p_cons 8.127859e-02   p_joint 8.094118e-05

Joint ci ratio: 2.107319e-01	ci left: 7.266496e-05	ci right 8.999846e-05	k: 345	n:4260000
Cons ci ratio: 6.385183e-03	ci left: 8.102306e-02	ci right 8.154229e-02	k: 346263	n:4260000
KS ci ratio: 1.149309e-01	ci left: 2.573120e-04	ci right 2.889137e-04	k: 1162	n:4260000
KIAA0182   4260000 perm   7111 sec   (599 perm/sec)   p_kst 2.727700e-04   p_cons 8.128239e-02   p_joint 8.098592e-05

Joint ci ratio: 2.104281e-01	ci left: 7.271663e-05	ci right 9.003421e-05	k: 346	n:4270000
Cons ci ratio: 6.377760e-03	ci left: 8.102201e-02	ci right 8.154062e-02	k: 347070	n:4270000
KS ci ratio: 1.147830e-01	ci left: 2.573918e-04	ci right 2.889598e-04	k: 1165	n:4270000
KIAA0182   4270000 perm   7142 sec   (598 perm/sec)   p_kst 2.728337e-04   p_cons 8.128103e-02   p_joint 8.103044e-05

Joint ci ratio: 2.104281e-01	ci left: 7.254673e-05	ci right 8.982385e-05	k: 346	n:4280000
Cons ci ratio: 6.370522e-03	ci left: 8.101722e-02	ci right 8.153522e-02	k: 347861	n:4280000
KS ci ratio: 1.147338e-01	ci left: 2.570173e-04	ci right 2.885250e-04	k: 1166	n:4280000
KIAA0182   4280000 perm   7174 sec   (597 perm/sec)   p_kst 2.724299e-04   p_cons 8.127593e-02   p_joint 8.084112e-05

Joint ci ratio: 2.101255e-01	ci left: 7.259845e-05	ci right 8.985983e-05	k: 347	n:4290000
Cons ci ratio: 6.362951e-03	ci left: 8.102084e-02	ci right 8.153824e-02	k: 348688	n:4290000
KS ci ratio: 1.146356e-01	ci left: 2.568710e-04	ci right 2.883321e-04	k: 1168	n:4290000
KIAA0182   4290000 perm   7205 sec   (595 perm/sec)   p_kst 2.722611e-04   p_cons 8.127925e-02   p_joint 8.088578e-05

Joint ci ratio: 2.095243e-01	ci left: 7.287030e-05	ci right 9.014037e-05	k: 349	n:4300000
Cons ci ratio: 6.355497e-03	ci left: 8.102235e-02	ci right 8.153915e-02	k: 349506	n:4300000
KS ci ratio: 1.145377e-01	ci left: 2.567254e-04	ci right 2.881400e-04	k: 1170	n:4300000
KIAA0182   4300000 perm   7237 sec   (594 perm/sec)   p_kst 2.720930e-04   p_cons 8.128047e-02   p_joint 8.116279e-05

Joint ci ratio: 2.095243e-01	ci left: 7.270122e-05	ci right 8.993123e-05	k: 349	n:4310000
Cons ci ratio: 6.347516e-03	ci left: 8.103682e-02	ci right 8.155307e-02	k: 350380	n:4310000
KS ci ratio: 1.144400e-01	ci left: 2.565805e-04	ci right 2.879487e-04	k: 1172	n:4310000
KIAA0182   4310000 perm   7269 sec   (593 perm/sec)   p_kst 2.719258e-04   p_cons 8.129466e-02   p_joint 8.097448e-05

Joint ci ratio: 2.095243e-01	ci left: 7.253293e-05	ci right 8.972306e-05	k: 349	n:4320000
Cons ci ratio: 6.340086e-03	ci left: 8.103898e-02	ci right 8.155463e-02	k: 351201	n:4320000
KS ci ratio: 1.142454e-01	ci left: 2.568860e-04	ci right 2.882346e-04	k: 1176	n:4320000
KIAA0182   4320000 perm   7301 sec   (592 perm/sec)   p_kst 2.722222e-04   p_cons 8.129653e-02   p_joint 8.078704e-05

Joint ci ratio: 2.095243e-01	ci left: 7.236542e-05	ci right 8.951585e-05	k: 349	n:4330000
Cons ci ratio: 6.333074e-03	ci left: 8.103191e-02	ci right 8.154694e-02	k: 351982	n:4330000
KS ci ratio: 1.141969e-01	ci left: 2.565171e-04	ci right 2.878065e-04	k: 1177	n:4330000
KIAA0182   4330000 perm   7333 sec   (590 perm/sec)   p_kst 2.718245e-04   p_cons 8.128915e-02   p_joint 8.060046e-05

Joint ci ratio: 2.092256e-01	ci left: 7.241701e-05	ci right 8.955207e-05	k: 350	n:4340000
Cons ci ratio: 6.326114e-03	ci left: 8.102418e-02	ci right 8.153859e-02	k: 352760	n:4340000
KS ci ratio: 1.140035e-01	ci left: 2.568214e-04	ci right 2.880913e-04	k: 1181	n:4340000
KIAA0182   4340000 perm   7365 sec   (589 perm/sec)   p_kst 2.721198e-04   p_cons 8.128111e-02   p_joint 8.064516e-05

Joint ci ratio: 2.089282e-01	ci left: 7.246839e-05	ci right 8.958810e-05	k: 351	n:4350000
Cons ci ratio: 6.318982e-03	ci left: 8.102107e-02	ci right 8.153489e-02	k: 353558	n:4350000
KS ci ratio: 1.137631e-01	ci left: 2.573477e-04	ci right 2.886111e-04	k: 1186	n:4350000
KIAA0182   4350000 perm   7397 sec   (588 perm/sec)   p_kst 2.726437e-04   p_cons 8.127770e-02   p_joint 8.068966e-05

Joint ci ratio: 2.089282e-01	ci left: 7.230217e-05	ci right 8.938263e-05	k: 351	n:4360000
Cons ci ratio: 6.311807e-03	ci left: 8.101959e-02	ci right 8.153280e-02	k: 354363	n:4360000
KS ci ratio: 1.136196e-01	ci left: 2.574260e-04	ci right 2.886568e-04	k: 1189	n:4360000
KIAA0182   4360000 perm   7430 sec   (587 perm/sec)   p_kst 2.727064e-04   p_cons 8.127592e-02   p_joint 8.050459e-05

Joint ci ratio: 2.086321e-01	ci left: 7.235359e-05	ci right 8.941887e-05	k: 352	n:4370000
Cons ci ratio: 6.304395e-03	ci left: 8.102428e-02	ci right 8.153692e-02	k: 355195	n:4370000
KS ci ratio: 1.136196e-01	ci left: 2.568369e-04	ci right 2.879963e-04	k: 1189	n:4370000
KIAA0182   4370000 perm   7462 sec   (586 perm/sec)   p_kst 2.720824e-04   p_cons 8.128032e-02   p_joint 8.054920e-05

Joint ci ratio: 2.086321e-01	ci left: 7.218840e-05	ci right 8.921472e-05	k: 352	n:4380000
Cons ci ratio: 6.297279e-03	ci left: 8.102256e-02	ci right 8.153461e-02	k: 355999	n:4380000
KS ci ratio: 1.135719e-01	ci left: 2.564723e-04	ci right 2.875736e-04	k: 1190	n:4380000
KIAA0182   4380000 perm   7494 sec   (584 perm/sec)   p_kst 2.716895e-04   p_cons 8.127831e-02   p_joint 8.036530e-05

Joint ci ratio: 2.086321e-01	ci left: 7.202396e-05	ci right 8.901150e-05	k: 352	n:4390000
Cons ci ratio: 6.290120e-03	ci left: 8.102245e-02	ci right 8.153391e-02	k: 356810	n:4390000
KS ci ratio: 1.135243e-01	ci left: 2.561094e-04	ci right 2.871527e-04	k: 1191	n:4390000
KIAA0182   4390000 perm   7526 sec   (583 perm/sec)   p_kst 2.712984e-04   p_cons 8.127790e-02   p_joint 8.018223e-05

Joint ci ratio: 2.083372e-01	ci left: 7.207568e-05	ci right 8.904832e-05	k: 353	n:4400000
Cons ci ratio: 6.282670e-03	ci left: 8.102982e-02	ci right 8.154073e-02	k: 357654	n:4400000
KS ci ratio: 1.133817e-01	ci left: 2.561898e-04	ci right 2.872013e-04	k: 1194	n:4400000
KIAA0182   4400000 perm   7559 sec   (582 perm/sec)   p_kst 2.713636e-04   p_cons 8.128500e-02   p_joint 8.022727e-05

Joint ci ratio: 2.080436e-01	ci left: 7.212718e-05	ci right 8.908496e-05	k: 354	n:4410000
Cons ci ratio: 6.275579e-03	ci left: 8.102924e-02	ci right 8.153956e-02	k: 358463	n:4410000
KS ci ratio: 1.132397e-01	ci left: 2.562699e-04	ci right 2.872496e-04	k: 1197	n:4410000
KIAA0182   4410000 perm   7592 sec   (581 perm/sec)   p_kst 2.714286e-04   p_cons 8.128413e-02   p_joint 8.027211e-05

Joint ci ratio: 2.077512e-01	ci left: 7.217846e-05	ci right 8.912141e-05	k: 355	n:4420000
Cons ci ratio: 6.268570e-03	ci left: 8.102731e-02	ci right 8.153704e-02	k: 359266	n:4420000
KS ci ratio: 1.130982e-01	ci left: 2.563496e-04	ci right 2.872976e-04	k: 1200	n:4420000
KIAA0182   4420000 perm   7624 sec   (580 perm/sec)   p_kst 2.714932e-04   p_cons 8.128190e-02   p_joint 8.031674e-05

Joint ci ratio: 2.074600e-01	ci left: 7.222953e-05	ci right 8.915769e-05	k: 356	n:4430000
Cons ci ratio: 6.261858e-03	ci left: 8.101884e-02	ci right 8.152798e-02	k: 360040	n:4430000
KS ci ratio: 1.128634e-01	ci left: 2.568677e-04	ci right 2.878096e-04	k: 1205	n:4430000
KIAA0182   4430000 perm   7657 sec   (579 perm/sec)   p_kst 2.720090e-04   p_cons 8.127314e-02   p_joint 8.036117e-05

Joint ci ratio: 2.071701e-01	ci left: 7.228038e-05	ci right 8.919378e-05	k: 357	n:4440000
Cons ci ratio: 6.254856e-03	ci left: 8.101784e-02	ci right 8.152640e-02	k: 360847	n:4440000
KS ci ratio: 1.128167e-01	ci left: 2.565081e-04	ci right 2.873930e-04	k: 1206	n:4440000
KIAA0182   4440000 perm   7690 sec   (577 perm/sec)   p_kst 2.716216e-04   p_cons 8.127185e-02   p_joint 8.040541e-05

Joint ci ratio: 2.071701e-01	ci left: 7.211795e-05	ci right 8.899335e-05	k: 357	n:4450000
Cons ci ratio: 6.247897e-03	ci left: 8.101639e-02	ci right 8.152438e-02	k: 361652	n:4450000
KS ci ratio: 1.127233e-01	ci left: 2.563684e-04	ci right 2.872093e-04	k: 1208	n:4450000
KIAA0182   4450000 perm   7723 sec   (576 perm/sec)   p_kst 2.714607e-04   p_cons 8.127011e-02   p_joint 8.022472e-05

Joint ci ratio: 2.071701e-01	ci left: 7.195625e-05	ci right 8.879381e-05	k: 357	n:4460000
Cons ci ratio: 6.240736e-03	ci left: 8.102033e-02	ci right 8.152775e-02	k: 362481	n:4460000
KS ci ratio: 1.126768e-01	ci left: 2.560115e-04	ci right 2.867959e-04	k: 1209	n:4460000
KIAA0182   4460000 perm   7756 sec   (575 perm/sec)   p_kst 2.710762e-04   p_cons 8.127377e-02   p_joint 8.004484e-05

Joint ci ratio: 2.068814e-01	ci left: 7.200739e-05	ci right 8.883046e-05	k: 358	n:4470000
Cons ci ratio: 6.233525e-03	ci left: 8.102603e-02	ci right 8.153290e-02	k: 363318	n:4470000
KS ci ratio: 1.125838e-01	ci left: 2.558736e-04	ci right 2.866143e-04	k: 1211	n:4470000
KIAA0182   4470000 perm   7790 sec   (574 perm/sec)   p_kst 2.709172e-04   p_cons 8.127919e-02   p_joint 8.008949e-05

Joint ci ratio: 2.063075e-01	ci left: 7.227000e-05	ci right 8.910167e-05	k: 360	n:4480000
Cons ci ratio: 6.226683e-03	ci left: 8.102346e-02	ci right 8.152976e-02	k: 364118	n:4480000
KS ci ratio: 1.123984e-01	ci left: 2.561702e-04	ci right 2.868925e-04	k: 1215	n:4480000
KIAA0182   4480000 perm   7823 sec   (573 perm/sec)   p_kst 2.712054e-04   p_cons 8.127634e-02   p_joint 8.035714e-05

Joint ci ratio: 2.057383e-01	ci left: 7.253150e-05	ci right 8.937161e-05	k: 362	n:4490000
Cons ci ratio: 6.219585e-03	ci left: 8.102758e-02	ci right 8.153332e-02	k: 364948	n:4490000
KS ci ratio: 1.119390e-01	ci left: 2.577643e-04	ci right 2.885431e-04	k: 1225	n:4490000
KIAA0182   4490000 perm   7856 sec   (572 perm/sec)   p_kst 2.728285e-04   p_cons 8.128018e-02   p_joint 8.062361e-05

Joint ci ratio: 2.054555e-01	ci left: 7.258110e-05	ci right 8.940665e-05	k: 363	n:4500000
Cons ci ratio: 6.212475e-03	ci left: 8.103256e-02	ci right 8.153776e-02	k: 365782	n:4500000
KS ci ratio: 1.118934e-01	ci left: 2.574075e-04	ci right 2.881304e-04	k: 1226	n:4500000
KIAA0182   4500000 perm   7890 sec   (570 perm/sec)   p_kst 2.724444e-04   p_cons 8.128489e-02   p_joint 8.066667e-05

Joint ci ratio: 2.048933e-01	ci left: 7.284084e-05	ci right 8.967462e-05	k: 365	n:4510000
Cons ci ratio: 6.206154e-03	ci left: 8.101915e-02	ci right 8.152374e-02	k: 366533	n:4510000
KS ci ratio: 1.117115e-01	ci left: 2.576989e-04	ci right 2.884032e-04	k: 1230	n:4510000
KIAA0182   4510000 perm   7923 sec   (569 perm/sec)   p_kst 2.727273e-04   p_cons 8.127118e-02   p_joint 8.093126e-05

Joint ci ratio: 2.048934e-01	ci left: 7.267969e-05	ci right 8.947623e-05	k: 365	n:4520000
Cons ci ratio: 6.199236e-03	ci left: 8.102059e-02	ci right 8.152463e-02	k: 367351	n:4520000
KS ci ratio: 1.116208e-01	ci left: 2.575589e-04	ci right 2.882200e-04	k: 1232	n:4520000
KIAA0182   4520000 perm   7957 sec   (568 perm/sec)   p_kst 2.725664e-04   p_cons 8.127235e-02   p_joint 8.075221e-05

Joint ci ratio: 2.043358e-01	ci left: 7.293813e-05	ci right 8.974280e-05	k: 367	n:4530000
Cons ci ratio: 6.192479e-03	ci left: 8.101873e-02	ci right 8.152220e-02	k: 368154	n:4530000
KS ci ratio: 1.114402e-01	ci left: 2.578487e-04	ci right 2.884914e-04	k: 1236	n:4530000
KIAA0182   4530000 perm   7990 sec   (567 perm/sec)   p_kst 2.728477e-04   p_cons 8.127020e-02   p_joint 8.101545e-05

Joint ci ratio: 2.037828e-01	ci left: 7.319549e-05	ci right 9.000813e-05	k: 369	n:4540000
Cons ci ratio: 6.185871e-03	ci left: 8.101379e-02	ci right 8.151670e-02	k: 368943	n:4540000
KS ci ratio: 1.113502e-01	ci left: 2.577090e-04	ci right 2.883087e-04	k: 1238	n:4540000
KIAA0182   4540000 perm   8024 sec   (566 perm/sec)   p_kst 2.726872e-04   p_cons 8.126498e-02   p_joint 8.127753e-05

Joint ci ratio: 2.032342e-01	ci left: 7.345179e-05	ci right 9.027224e-05	k: 371	n:4550000
Cons ci ratio: 6.178985e-03	ci left: 8.101612e-02	ci right 8.151848e-02	k: 369765	n:4550000
KS ci ratio: 1.111709e-01	ci left: 2.579973e-04	ci right 2.885787e-04	k: 1242	n:4550000
KIAA0182   4550000 perm   8058 sec   (565 perm/sec)   p_kst 2.729670e-04   p_cons 8.126703e-02   p_joint 8.153846e-05

Joint ci ratio: 2.032342e-01	ci left: 7.329071e-05	ci right 9.007427e-05	k: 371	n:4560000
Cons ci ratio: 6.172112e-03	ci left: 8.101866e-02	ci right 8.152047e-02	k: 370588	n:4560000
KS ci ratio: 1.110370e-01	ci left: 2.580711e-04	ci right 2.886220e-04	k: 1245	n:4560000
KIAA0182   4560000 perm   8091 sec   (564 perm/sec)   p_kst 2.730263e-04   p_cons 8.126930e-02   p_joint 8.135965e-05

Joint ci ratio: 2.032342e-01	ci left: 7.313033e-05	ci right 8.987717e-05	k: 371	n:4570000
Cons ci ratio: 6.165181e-03	ci left: 8.102315e-02	ci right 8.152443e-02	k: 371420	n:4570000
KS ci ratio: 1.109480e-01	ci left: 2.579319e-04	ci right 2.884402e-04	k: 1247	n:4570000
KIAA0182   4570000 perm   8125 sec   (562 perm/sec)   p_kst 2.728665e-04   p_cons 8.127352e-02   p_joint 8.118162e-05

Joint ci ratio: 2.024196e-01	ci left: 7.359242e-05	ci right 9.036918e-05	k: 374	n:4580000
Cons ci ratio: 6.158391e-03	ci left: 8.102479e-02	ci right 8.152552e-02	k: 372239	n:4580000
KS ci ratio: 1.107264e-01	ci left: 2.584301e-04	ci right 2.889324e-04	k: 1252	n:4580000
KIAA0182   4580000 perm   8158 sec   (561 perm/sec)   p_kst 2.733624e-04   p_cons 8.127489e-02   p_joint 8.165939e-05

Joint ci ratio: 2.021503e-01	ci left: 7.363892e-05	ci right 9.040118e-05	k: 375	n:4590000
Cons ci ratio: 6.151623e-03	ci left: 8.102642e-02	ci right 8.152661e-02	k: 373058	n:4590000
KS ci ratio: 1.106381e-01	ci left: 2.582908e-04	ci right 2.887507e-04	k: 1254	n:4590000
KIAA0182   4590000 perm   8192 sec   (560 perm/sec)   p_kst 2.732026e-04   p_cons 8.127625e-02   p_joint 8.169935e-05

Joint ci ratio: 2.021503e-01	ci left: 7.347883e-05	ci right 9.020466e-05	k: 375	n:4600000
Cons ci ratio: 6.144734e-03	ci left: 8.103152e-02	ci right 8.153118e-02	k: 373893	n:4600000
KS ci ratio: 1.104184e-01	ci left: 2.587862e-04	ci right 2.892399e-04	k: 1259	n:4600000
KIAA0182   4600000 perm   8226 sec   (559 perm/sec)   p_kst 2.736957e-04   p_cons 8.128109e-02   p_joint 8.152174e-05

Joint ci ratio: 2.021503e-01	ci left: 7.331944e-05	ci right 9.000899e-05	k: 375	n:4610000
Cons ci ratio: 6.138001e-03	ci left: 8.103335e-02	ci right 8.153247e-02	k: 374713	n:4610000
KS ci ratio: 1.103308e-01	ci left: 2.586467e-04	ci right 2.890583e-04	k: 1261	n:4610000
KIAA0182   4610000 perm   8260 sec   (558 perm/sec)   p_kst 2.735358e-04   p_cons 8.128265e-02   p_joint 8.134490e-05

Joint ci ratio: 2.021503e-01	ci left: 7.316074e-05	ci right 8.981416e-05	k: 375	n:4620000
Cons ci ratio: 6.131273e-03	ci left: 8.103560e-02	ci right 8.153419e-02	k: 375535	n:4620000
KS ci ratio: 1.102872e-01	ci left: 2.582973e-04	ci right 2.886551e-04	k: 1262	n:4620000
KIAA0182   4620000 perm   8294 sec   (557 perm/sec)   p_kst 2.731602e-04   p_cons 8.128463e-02   p_joint 8.116883e-05

Joint ci ratio: 2.021503e-01	ci left: 7.300273e-05	ci right 8.962018e-05	k: 375	n:4630000
Cons ci ratio: 6.124718e-03	ci left: 8.103418e-02	ci right 8.153222e-02	k: 376340	n:4630000
KS ci ratio: 1.100695e-01	ci left: 2.587896e-04	ci right 2.891413e-04	k: 1267	n:4630000
KIAA0182   4630000 perm   8328 sec   (556 perm/sec)   p_kst 2.736501e-04   p_cons 8.128294e-02   p_joint 8.099352e-05

Joint ci ratio: 2.013486e-01	ci left: 7.345929e-05	ci right 9.010620e-05	k: 378	n:4640000
Cons ci ratio: 6.118166e-03	ci left: 8.103319e-02	ci right 8.153069e-02	k: 377147	n:4640000
KS ci ratio: 1.099395e-01	ci left: 2.588606e-04	ci right 2.891825e-04	k: 1270	n:4640000
KIAA0182   4640000 perm   8362 sec   (555 perm/sec)   p_kst 2.737069e-04   p_cons 8.128168e-02   p_joint 8.146552e-05

Joint ci ratio: 2.005564e-01	ci left: 7.391401e-05	ci right 9.059000e-05	k: 381	n:4650000
Cons ci ratio: 6.111406e-03	ci left: 8.103779e-02	ci right 8.153477e-02	k: 377980	n:4650000
KS ci ratio: 1.097669e-01	ci left: 2.591405e-04	ci right 2.894444e-04	k: 1274	n:4650000
KIAA0182   4650000 perm   8396 sec   (554 perm/sec)   p_kst 2.739785e-04   p_cons 8.128602e-02   p_joint 8.193548e-05

Joint ci ratio: 2.005564e-01	ci left: 7.375540e-05	ci right 9.039560e-05	k: 381	n:4660000
Cons ci ratio: 6.104818e-03	ci left: 8.103873e-02	ci right 8.153518e-02	k: 378796	n:4660000
KS ci ratio: 1.096809e-01	ci left: 2.590018e-04	ci right 2.892643e-04	k: 1276	n:4660000
KIAA0182   4660000 perm   8430 sec   (553 perm/sec)   p_kst 2.738197e-04   p_cons 8.128670e-02   p_joint 8.175966e-05

Joint ci ratio: 2.002944e-01	ci left: 7.380085e-05	ci right 9.042690e-05	k: 382	n:4670000
Cons ci ratio: 6.098120e-03	ci left: 8.104288e-02	ci right 8.153880e-02	k: 379627	n:4670000
KS ci ratio: 1.095523e-01	ci left: 2.590720e-04	ci right 2.893049e-04	k: 1279	n:4670000
KIAA0182   4670000 perm   8464 sec   (552 perm/sec)   p_kst 2.738758e-04   p_cons 8.129058e-02   p_joint 8.179872e-05

Joint ci ratio: 1.997735e-01	ci left: 7.404910e-05	ci right 9.068240e-05	k: 384	n:4680000
Cons ci ratio: 6.091592e-03	ci left: 8.104337e-02	ci right 8.153877e-02	k: 380441	n:4680000
KS ci ratio: 1.094241e-01	ci left: 2.591419e-04	ci right 2.893453e-04	k: 1282	n:4680000
KIAA0182   4680000 perm   8498 sec   (551 perm/sec)   p_kst 2.739316e-04   p_cons 8.129081e-02   p_joint 8.205128e-05

Joint ci ratio: 1.992566e-01	ci left: 7.429635e-05	ci right 9.093677e-05	k: 386	n:4690000
Cons ci ratio: 6.085145e-03	ci left: 8.104238e-02	ci right 8.153724e-02	k: 381248	n:4690000
KS ci ratio: 1.092540e-01	ci left: 2.594189e-04	ci right 2.896045e-04	k: 1286	n:4690000
KIAA0182   4690000 perm   8533 sec   (550 perm/sec)   p_kst 2.742004e-04   p_cons 8.128955e-02   p_joint 8.230277e-05

Joint ci ratio: 1.984887e-01	ci left: 7.474479e-05	ci right 9.141332e-05	k: 389	n:4700000
Cons ci ratio: 6.078737e-03	ci left: 8.104096e-02	ci right 8.153530e-02	k: 382053	n:4700000
KS ci ratio: 1.090423e-01	ci left: 2.599018e-04	ci right 2.900812e-04	k: 1291	n:4700000
KIAA0182   4700000 perm   8567 sec   (549 perm/sec)   p_kst 2.746809e-04   p_cons 8.128787e-02   p_joint 8.276596e-05

Joint ci ratio: 1.982347e-01	ci left: 7.478787e-05	ci right 9.144208e-05	k: 390	n:4710000
Cons ci ratio: 6.072495e-03	ci left: 8.103595e-02	ci right 8.152974e-02	k: 382841	n:4710000
KS ci ratio: 1.089159e-01	ci left: 2.599695e-04	ci right 2.901196e-04	k: 1294	n:4710000
KIAA0182   4710000 perm   8602 sec   (548 perm/sec)   p_kst 2.747346e-04   p_cons 8.128259e-02   p_joint 8.280255e-05

Joint ci ratio: 1.982347e-01	ci left: 7.462942e-05	ci right 9.124835e-05	k: 390	n:4720000
Cons ci ratio: 6.065971e-03	ci left: 8.103837e-02	ci right 8.153164e-02	k: 383664	n:4720000
KS ci ratio: 1.087900e-01	ci left: 2.600371e-04	ci right 2.901578e-04	k: 1297	n:4720000
KIAA0182   4720000 perm   8637 sec   (547 perm/sec)   p_kst 2.747881e-04   p_cons 8.128475e-02   p_joint 8.262712e-05

Joint ci ratio: 1.972283e-01	ci left: 7.527545e-05	ci right 9.194291e-05	k: 394	n:4730000
Cons ci ratio: 6.059537e-03	ci left: 8.103908e-02	ci right 8.153183e-02	k: 384479	n:4730000
KS ci ratio: 1.085394e-01	ci left: 2.607213e-04	ci right 2.908473e-04	k: 1303	n:4730000
KIAA0182   4730000 perm   8671 sec   (545 perm/sec)   p_kst 2.754757e-04   p_cons 8.128520e-02   p_joint 8.329810e-05

Joint ci ratio: 1.969792e-01	ci left: 7.531720e-05	ci right 9.197031e-05	k: 395	n:4740000
Cons ci ratio: 6.053602e-03	ci left: 8.102799e-02	ci right 8.152020e-02	k: 385238	n:4740000
KS ci ratio: 1.084147e-01	ci left: 2.607870e-04	ci right 2.908838e-04	k: 1306	n:4740000
KIAA0182   4740000 perm   8706 sec   (544 perm/sec)   p_kst 2.755274e-04   p_cons 8.127384e-02   p_joint 8.333333e-05

Joint ci ratio: 1.969792e-01	ci left: 7.515863e-05	ci right 9.177669e-05	k: 395	n:4750000
Cons ci ratio: 6.047105e-03	ci left: 8.103125e-02	ci right 8.152294e-02	k: 386065	n:4750000
KS ci ratio: 1.082905e-01	ci left: 2.608525e-04	ci right 2.909201e-04	k: 1309	n:4750000
KIAA0182   4750000 perm   8741 sec   (543 perm/sec)   p_kst 2.755789e-04   p_cons 8.127684e-02   p_joint 8.315789e-05

Joint ci ratio: 1.964836e-01	ci left: 7.540021e-05	ci right 9.202471e-05	k: 397	n:4760000
Cons ci ratio: 6.040697e-03	ci left: 8.103282e-02	ci right 8.152400e-02	k: 386884	n:4760000
KS ci ratio: 1.082080e-01	ci left: 2.607132e-04	ci right 2.907405e-04	k: 1311	n:4760000
KIAA0182   4760000 perm   8776 sec   (542 perm/sec)   p_kst 2.754202e-04   p_cons 8.127815e-02   p_joint 8.340336e-05

Joint ci ratio: 1.962372e-01	ci left: 7.544148e-05	ci right 9.205173e-05	k: 398	n:4770000
Cons ci ratio: 6.034826e-03	ci left: 8.102161e-02	ci right 8.151224e-02	k: 387642	n:4770000
KS ci ratio: 1.081668e-01	ci left: 2.603706e-04	ci right 2.903463e-04	k: 1312	n:4770000
KIAA0182   4770000 perm   8811 sec   (541 perm/sec)   p_kst 2.750524e-04   p_cons 8.126667e-02   p_joint 8.343816e-05

Joint ci ratio: 1.959918e-01	ci left: 7.548258e-05	ci right 9.207861e-05	k: 399	n:4780000
Cons ci ratio: 6.028600e-03	ci left: 8.101963e-02	ci right 8.150974e-02	k: 388444	n:4780000
KS ci ratio: 1.080845e-01	ci left: 2.602330e-04	ci right 2.901686e-04	k: 1314	n:4780000
KIAA0182   4780000 perm   8846 sec   (540 perm/sec)   p_kst 2.748954e-04   p_cons 8.126444e-02   p_joint 8.347280e-05

Joint ci ratio: 1.952609e-01	ci left: 7.592063e-05	ci right 9.254332e-05	k: 402	n:4790000
Cons ci ratio: 6.022023e-03	ci left: 8.102684e-02	ci right 8.151646e-02	k: 389290	n:4790000
KS ci ratio: 1.079614e-01	ci left: 2.602991e-04	ci right 2.902060e-04	k: 1317	n:4790000
KIAA0182   4790000 perm   8882 sec   (539 perm/sec)   p_kst 2.749478e-04   p_cons 8.127140e-02   p_joint 8.392484e-05

Joint ci ratio: 1.945381e-01	ci left: 7.635697e-05	ci right 9.300598e-05	k: 405	n:4800000
Cons ci ratio: 6.015711e-03	ci left: 8.102799e-02	ci right 8.151710e-02	k: 390107	n:4800000
KS ci ratio: 1.077979e-01	ci left: 2.605677e-04	ci right 2.904572e-04	k: 1321	n:4800000
KIAA0182   4800000 perm   8917 sec   (538 perm/sec)   p_kst 2.752083e-04   p_cons 8.127229e-02   p_joint 8.437500e-05

Joint ci ratio: 1.945381e-01	ci left: 7.619822e-05	ci right 9.281262e-05	k: 405	n:4810000
Cons ci ratio: 6.009494e-03	ci left: 8.102726e-02	ci right 8.151586e-02	k: 390915	n:4810000
KS ci ratio: 1.077572e-01	ci left: 2.602283e-04	ci right 2.900669e-04	k: 1322	n:4810000
KIAA0182   4810000 perm   8952 sec   (537 perm/sec)   p_kst 2.748441e-04   p_cons 8.127131e-02   p_joint 8.419958e-05

Joint ci ratio: 1.938233e-01	ci left: 7.663228e-05	ci right 9.327269e-05	k: 408	n:4820000
Cons ci ratio: 6.003246e-03	ci left: 8.102778e-02	ci right 8.151587e-02	k: 391729	n:4820000
KS ci ratio: 1.073925e-01	ci left: 2.615054e-04	ci right 2.913825e-04	k: 1331	n:4820000
KIAA0182   4820000 perm   8987 sec   (536 perm/sec)   p_kst 2.761411e-04   p_cons 8.127158e-02   p_joint 8.464730e-05

Joint ci ratio: 1.935868e-01	ci left: 7.667062e-05	ci right 9.329665e-05	k: 409	n:4830000
Cons ci ratio: 5.996885e-03	ci left: 8.103161e-02	ci right 8.151920e-02	k: 392559	n:4830000
KS ci ratio: 1.071514e-01	ci left: 2.621728e-04	ci right 2.920548e-04	k: 1337	n:4830000
KIAA0182   4830000 perm   9023 sec   (535 perm/sec)   p_kst 2.768116e-04   p_cons 8.127516e-02   p_joint 8.467909e-05

Joint ci ratio: 1.933511e-01	ci left: 7.670882e-05	ci right 9.332049e-05	k: 410	n:4840000
Cons ci ratio: 5.990891e-03	ci left: 8.102675e-02	ci right 8.151383e-02	k: 393347	n:4840000
KS ci ratio: 1.071114e-01	ci left: 2.618322e-04	ci right 2.916635e-04	k: 1338	n:4840000
KIAA0182   4840000 perm   9059 sec   (534 perm/sec)   p_kst 2.764463e-04   p_cons 8.127004e-02   p_joint 8.471074e-05

Joint ci ratio: 1.933511e-01	ci left: 7.655065e-05	ci right 9.312808e-05	k: 410	n:4850000
Cons ci ratio: 5.984991e-03	ci left: 8.102006e-02	ci right 8.150662e-02	k: 394126	n:4850000
KS ci ratio: 1.069916e-01	ci left: 2.618944e-04	ci right 2.916972e-04	k: 1341	n:4850000
KIAA0182   4850000 perm   9095 sec   (533 perm/sec)   p_kst 2.764948e-04   p_cons 8.126309e-02   p_joint 8.453608e-05

Joint ci ratio: 1.931163e-01	ci left: 7.658895e-05	ci right 9.315216e-05	k: 411	n:4860000
Cons ci ratio: 5.979387e-03	ci left: 8.100642e-02	ci right 8.149244e-02	k: 394871	n:4860000
KS ci ratio: 1.068325e-01	ci left: 2.621565e-04	ci right 2.919421e-04	k: 1345	n:4860000
KIAA0182   4860000 perm   9131 sec   (532 perm/sec)   p_kst 2.767490e-04   p_cons 8.124918e-02   p_joint 8.456790e-05

Joint ci ratio: 1.928824e-01	ci left: 7.662710e-05	ci right 9.317613e-05	k: 412	n:4870000
Cons ci ratio: 5.973455e-03	ci left: 8.100144e-02	ci right 8.148694e-02	k: 395658	n:4870000
KS ci ratio: 1.067928e-01	ci left: 2.618181e-04	ci right 2.915534e-04	k: 1346	n:4870000
KIAA0182   4870000 perm   9167 sec   (531 perm/sec)   p_kst 2.763860e-04   p_cons 8.124394e-02   p_joint 8.459959e-05

Joint ci ratio: 1.926493e-01	ci left: 7.666511e-05	ci right 9.319999e-05	k: 413	n:4880000
Cons ci ratio: 5.967286e-03	ci left: 8.100283e-02	ci right 8.148784e-02	k: 396476	n:4880000
KS ci ratio: 1.067137e-01	ci left: 2.616805e-04	ci right 2.913768e-04	k: 1348	n:4880000
KIAA0182   4880000 perm   9203 sec   (530 perm/sec)   p_kst 2.762295e-04   p_cons 8.124508e-02   p_joint 8.463115e-05

Joint ci ratio: 1.921856e-01	ci left: 7.689762e-05	ci right 9.343807e-05	k: 415	n:4890000
Cons ci ratio: 5.961421e-03	ci left: 8.099706e-02	ci right 8.148156e-02	k: 397259	n:4890000
KS ci ratio: 1.065952e-01	ci left: 2.617425e-04	ci right 2.914108e-04	k: 1351	n:4890000
KIAA0182   4890000 perm   9238 sec   (529 perm/sec)   p_kst 2.762781e-04   p_cons 8.123906e-02   p_joint 8.486708e-05

Joint ci ratio: 1.919550e-01	ci left: 7.693496e-05	ci right 9.346127e-05	k: 416	n:4900000
Cons ci ratio: 5.955713e-03	ci left: 8.098785e-02	ci right 8.147183e-02	k: 398025	n:4900000
KS ci ratio: 1.064378e-01	ci left: 2.620029e-04	ci right 2.916541e-04	k: 1355	n:4900000
KIAA0182   4900000 perm   9274 sec   (528 perm/sec)   p_kst 2.765306e-04   p_cons 8.122959e-02   p_joint 8.489796e-05

Joint ci ratio: 1.919551e-01	ci left: 7.677827e-05	ci right 9.327092e-05	k: 416	n:4910000
Cons ci ratio: 5.950013e-03	ci left: 8.097888e-02	ci right 8.146234e-02	k: 398792	n:4910000
KS ci ratio: 1.063986e-01	ci left: 2.616675e-04	ci right 2.912692e-04	k: 1356	n:4910000
KIAA0182   4910000 perm   9310 sec   (527 perm/sec)   p_kst 2.761711e-04   p_cons 8.122037e-02   p_joint 8.472505e-05

Joint ci ratio: 1.917253e-01	ci left: 7.681571e-05	ci right 9.329435e-05	k: 417	n:4920000
Cons ci ratio: 5.943617e-03	ci left: 8.098782e-02	ci right 8.147081e-02	k: 399647	n:4920000
KS ci ratio: 1.062812e-01	ci left: 2.617292e-04	ci right 2.913032e-04	k: 1359	n:4920000
KIAA0182   4920000 perm   9346 sec   (526 perm/sec)   p_kst 2.762195e-04   p_cons 8.122907e-02   p_joint 8.475610e-05

Joint ci ratio: 1.917253e-01	ci left: 7.665989e-05	ci right 9.310511e-05	k: 417	n:4930000
Cons ci ratio: 5.937814e-03	ci left: 8.098233e-02	ci right 8.146481e-02	k: 400431	n:4930000
KS ci ratio: 1.062422e-01	ci left: 2.613958e-04	ci right 2.909205e-04	k: 1360	n:4930000
KIAA0182   4930000 perm   9383 sec   (525 perm/sec)   p_kst 2.758621e-04   p_cons 8.122333e-02   p_joint 8.458418e-05

Joint ci ratio: 1.917253e-01	ci left: 7.650471e-05	ci right 9.291664e-05	k: 417	n:4940000
Cons ci ratio: 5.931586e-03	ci left: 8.098799e-02	ci right 8.147000e-02	k: 401270	n:4940000
KS ci ratio: 1.061642e-01	ci left: 2.612607e-04	ci right 2.907472e-04	k: 1362	n:4940000
KIAA0182   4940000 perm   9420 sec   (524 perm/sec)   p_kst 2.757085e-04   p_cons 8.122874e-02   p_joint 8.441296e-05

Joint ci ratio: 1.908145e-01	ci left: 7.711954e-05	ci right 9.357565e-05	k: 421	n:4950000
Cons ci ratio: 5.925457e-03	ci left: 8.099160e-02	ci right 8.147313e-02	k: 402099	n:4950000
KS ci ratio: 1.060088e-01	ci left: 2.615196e-04	ci right 2.909894e-04	k: 1366	n:4950000
KIAA0182   4950000 perm   9456 sec   (523 perm/sec)   p_kst 2.759596e-04   p_cons 8.123212e-02   p_joint 8.505051e-05

Joint ci ratio: 1.901398e-01	ci left: 7.754006e-05	ci right 9.402064e-05	k: 424	n:4960000
Cons ci ratio: 5.919547e-03	ci left: 8.099017e-02	ci right 8.147121e-02	k: 402903	n:4960000
KS ci ratio: 1.059313e-01	ci left: 2.613848e-04	ci right 2.908166e-04	k: 1368	n:4960000
KIAA0182   4960000 perm   9492 sec   (523 perm/sec)   p_kst 2.758065e-04   p_cons 8.123044e-02   p_joint 8.548387e-05

Joint ci ratio: 1.899165e-01	ci left: 7.757568e-05	ci right 9.404223e-05	k: 425	n:4970000
Cons ci ratio: 5.913575e-03	ci left: 8.099075e-02	ci right 8.147131e-02	k: 403717	n:4970000
KS ci ratio: 1.058927e-01	ci left: 2.610548e-04	ci right 2.904380e-04	k: 1369	n:4970000
KIAA0182   4970000 perm   9529 sec   (522 perm/sec)   p_kst 2.754527e-04   p_cons 8.123078e-02   p_joint 8.551308e-05

Joint ci ratio: 1.899165e-01	ci left: 7.741990e-05	ci right 9.385339e-05	k: 425	n:4980000
Cons ci ratio: 5.907558e-03	ci left: 8.099293e-02	ci right 8.147301e-02	k: 404539	n:4980000
KS ci ratio: 1.057769e-01	ci left: 2.611170e-04	ci right 2.904731e-04	k: 1372	n:4980000
KIAA0182   4980000 perm   9566 sec   (521 perm/sec)   p_kst 2.755020e-04   p_cons 8.123273e-02   p_joint 8.534137e-05

Joint ci ratio: 1.899165e-01	ci left: 7.726475e-05	ci right 9.366531e-05	k: 425	n:4990000
Cons ci ratio: 5.901559e-03	ci left: 8.099511e-02	ci right 8.147471e-02	k: 405361	n:4990000
KS ci ratio: 1.057384e-01	ci left: 2.607889e-04	ci right 2.900967e-04	k: 1373	n:4990000
KIAA0182   4990000 perm   9602 sec   (520 perm/sec)   p_kst 2.751503e-04   p_cons 8.123467e-02   p_joint 8.517034e-05

Joint ci ratio: 1.899165e-01	ci left: 7.711022e-05	ci right 9.347798e-05	k: 425	n:5000000
Cons ci ratio: 5.895887e-03	ci left: 8.098949e-02	ci right 8.146860e-02	k: 406144	n:5000000
KS ci ratio: 1.055848e-01	ci left: 2.610461e-04	ci right 2.903377e-04	k: 1377	n:5000000
KIAA0182   5000000 perm   9639 sec   (519 perm/sec)   p_kst 2.754000e-04   p_cons 8.122880e-02   p_joint 8.500000e-05

Outputting figure to mutsig2_images.part000000000090/KIAA0182.2_3718_5000000_0.0002754_0.081229_8.5e-05.png
                gene_name: KIAA0182
               theta_stop: 0.19 
                    nperm: 5000000 
                     p_ks: 0.00028 
        ci_ks_bounds_left: 0.00026 
       ci_ks_bounds_right: 0.00029 
                   p_cons: 0.081 
      ci_cons_bounds_left: 0.081 
     ci_cons_bounds_right: 0.081 
                  p_joint: 8.50e-05 
     ci_joint_bounds_left: 7.71e-05 
    ci_joint_bounds_right: 9.35e-05 

Current progress: 50 percent done.
KIAA0284
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.161796e-02	ci left: 5.961424e-01	ci right 6.153959e-01	k: 6058	n:10000
Cons ci ratio: 2.149762e-03	ci left: 9.958378e-01	ci right 9.980570e-01	k: 9971	n:10000
KS ci ratio: 8.679855e-02	ci left: 1.619969e-01	ci right 1.767962e-01	k: 1693	n:10000
KIAA0284   10000 perm   2 sec   (5995 perm/sec)   p_kst 1.693000e-01   p_cons 9.971000e-01   p_joint 6.058000e-01

Outputting figure to mutsig2_images.part000000000090/KIAA0284.2_4737_10000_0.1693_0.9971_0.6058.png
                gene_name: KIAA0284
               theta_stop: 0.087 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.18 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.61 
     ci_joint_bounds_left: 0.60 
    ci_joint_bounds_right: 0.62 

Current progress: 67 percent done.
KIAA0892
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.688109e-03	ci left: 9.683648e-01	ci right 9.749566e-01	k: 9718	n:10000
Cons ci ratio: 2.797670e-02	ci left: 6.531359e-01	ci right 6.717694e-01	k: 6625	n:10000
KS ci ratio: 1.353717e-02	ci left: 8.872890e-01	ci right 8.994808e-01	k: 8935	n:10000
KIAA0892   10000 perm   1 sec   (7239 perm/sec)   p_kst 8.935000e-01   p_cons 6.625000e-01   p_joint 9.718000e-01

Outputting figure to mutsig2_images.part000000000090/KIAA0892.2_1918_10000_0.8935_0.6625_0.9718.png
                gene_name: KIAA0892
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.89 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.65 
     ci_cons_bounds_right: 0.67 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.97 

Current progress: 83 percent done.
KIAA1244
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.821783e-02	ci left: 8.147659e-01	ci right 8.298458e-01	k: 8224	n:10000
Cons ci ratio: 3.245844e-02	ci left: 5.834959e-01	ci right 6.028498e-01	k: 5932	n:10000
KS ci ratio: 2.366646e-01	ci left: 2.353468e-02	ci right 2.994503e-02	k: 266	n:10000
KIAA1244   10000 perm   2 sec   (5499 perm/sec)   p_kst 2.660000e-02   p_cons 5.932000e-01   p_joint 8.224000e-01

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 2.357885e-02	ci left: 5.732738e-01	ci right 5.870028e-01	k: 11603	n:20000
KS ci ratio: 1.663931e-01	ci left: 2.474968e-02	ci right 2.928924e-02	k: 539	n:20000
KIAA1244   20000 perm   4 sec   (4962 perm/sec)   p_kst 2.695000e-02   p_cons 5.801500e-01   p_joint 1

Joint ci ratio: 1.306580e-04	ci left: 9.998770e-01	ci right 1	k: 30000	n:30000
Cons ci ratio: 1.921359e-02	ci left: 5.755261e-01	ci right 5.867249e-01	k: 17434	n:30000
KS ci ratio: 1.336716e-01	ci left: 2.600110e-02	ci right 2.975775e-02	k: 835	n:30000
KIAA1244   30000 perm   6 sec   (4757 perm/sec)   p_kst 2.783333e-02   p_cons 5.811333e-01   p_joint 1

Joint ci ratio: 9.799510e-05	ci left: 9.999078e-01	ci right 1	k: 40000	n:40000
Cons ci ratio: 1.665187e-02	ci left: 5.759212e-01	ci right 5.856170e-01	k: 23231	n:40000
KS ci ratio: 1.146398e-01	ci left: 2.676963e-02	ci right 3.004931e-02	k: 1135	n:40000
KIAA1244   40000 perm   9 sec   (4631 perm/sec)   p_kst 2.837500e-02   p_cons 5.807750e-01   p_joint 1

Joint ci ratio: 7.839686e-05	ci left: 9.999262e-01	ci right 1	k: 50000	n:50000
Cons ci ratio: 1.488220e-02	ci left: 5.768209e-01	ci right 5.854897e-01	k: 29058	n:50000
KS ci ratio: 1.021676e-01	ci left: 2.713693e-02	ci right 3.007814e-02	k: 1429	n:50000
KIAA1244   50000 perm   11 sec   (4525 perm/sec)   p_kst 2.858000e-02   p_cons 5.811600e-01   p_joint 1

Joint ci ratio: 6.533116e-05	ci left: 9.999385e-01	ci right 1	k: 60000	n:60000
Cons ci ratio: 1.358865e-02	ci left: 5.770900e-01	ci right 5.850022e-01	k: 34863	n:60000
KS ci ratio: 9.284901e-02	ci left: 2.750887e-02	ci right 3.020363e-02	k: 1730	n:60000
KIAA1244   60000 perm   14 sec   (4434 perm/sec)   p_kst 2.883333e-02   p_cons 5.810500e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000090/KIAA1244.2_6670_60000_0.028833_0.58105_1.png
                gene_name: KIAA1244
               theta_stop: 0.093 
                    nperm: 60000 
                     p_ks: 0.029 
        ci_ks_bounds_left: 0.028 
       ci_ks_bounds_right: 0.030 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.58 
     ci_cons_bounds_right: 0.59 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000090
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 90 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1557>
Subject: Job 8704247: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1557>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000091> was used as the working directory.
Started at Thu Nov 15 19:33:50 2012
Results reported at Thu Nov 15 19:57:14 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000091.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000091.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 91  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000091.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   1623.95 sec.
    Max Memory :      6151 MB
    Max Swap   :      8438 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
91
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 91
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 91: processing genes 8143 - 8232
Calculating significance of each gene.
Using projection method.
8143	KIAA1462	1
8144	KIAA1467	2.406710e-01
8145	KIAA1468	4.315309e-01
8146	KIAA1486	1
8147	KIAA1522	4.785942e-02
8148	KIAA1524	1
8149	KIAA1529	1.527133e-01
8150	KIAA1530	2.550391e-01
8151	KIAA1539	1
8152	KIAA1543	1
8153	KIAA1549	4.131056e-01
8154	KIAA1586	1
8155	KIAA1598	1
8156	KIAA1609	1.120856e-01
8157	KIAA1614	1
8158	KIAA1632	9.260176e-02
8159	KIAA1644	1
8160	KIAA1683	1
8161	KIAA1704	1
8162	KIAA1712	1
8163	KIAA1715	1
8164	KIAA1737	1
8165	KIAA1751	1
8166	KIAA1755	2.846069e-01
8167	KIAA1797	2.221404e-01
8168	KIAA1804	1
8169	KIAA1826	1
8170	KIAA1841	1
8171	KIAA1919	1
8172	KIAA1949	1
8173	KIAA1958	2.691395e-01
8174	KIAA1967	1.906296e-01
8175	KIAA1984	1
8176	KIAA2013	1
8177	KIAA2018	4.314349e-01
8178	KIAA2022	4.607636e-01
8179	KIAA2026	1
8180	KIDINS220	4.047612e-01
8181	KIF11	1
8182	KIF12	1
8183	KIF13A	1
8184	KIF13B	1
8185	KIF14	4.523403e-01
8186	KIF15	3.487466e-01
8187	KIF16B	1
8188	KIF17	1
8189	KIF18A	1
8190	KIF18B	1
8191	KIF19	1
8192	KIF1A	1.425150e-01
8193	KIF1B	1.284647e-01
8194	KIF1C	2.312355e-01
8195	KIF20A	1
8196	KIF20B	1
8197	KIF21A	4.870183e-01
8198	KIF21B	3.113498e-01
8199	KIF22	1
8200	KIF23	8.993864e-02
8201	KIF24	1
8202	KIF25	1.218794e-02
8203	KIF26A	1
8204	KIF26B	1
8205	KIF27	4.458228e-01
8206	KIF2A	1
8207	KIF2B	1
8208	KIF2C	2.770482e-01
8209	KIF3A	1
8210	KIF3B	1
8211	KIF3C	1
8212	KIF4A	1
8213	KIF4B	1
8214	KIF5A	1
8215	KIF5B	1
8216	KIF5C	1
8217	KIF6	1
8218	KIF7	1
8219	KIF9	1.017738e-01
8220	KIFAP3	1
8221	KIFC1	1
8222	KIFC2	1
8223	KIFC3	1
8224	KIN	1
8225	KIR2DL1	1.335954e-01
8226	KIR2DL3	1
8227	KIR2DL4	1
8228	KIR2DS4	5.273483e-02
8229	KIR3DL1	3.190582e-03
8230	KIR3DL2	1
8231	KIR3DL3	1
8232	KIR3DP1	1
Done

Running MutSig 2:
Scatter job 91: processing genes 8143 - 8232
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
KIAA1632
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.733613e-02	ci left: 1.964346e-01	ci right 2.123380e-01	k: 2043	n:10000
Cons ci ratio: 1.123029e-01	ci left: 1.024689e-01	ci right 1.147601e-01	k: 1085	n:10000
KS ci ratio: 5.650599e-02	ci left: 3.156236e-01	ci right 3.340785e-01	k: 3248	n:10000
KIAA1632   10000 perm   3 sec   (3256 perm/sec)   p_kst 3.248000e-01   p_cons 1.085000e-01   p_joint 2.043000e-01

Joint ci ratio: 5.822618e-02	ci left: 1.793431e-01	ci right 1.901487e-01	k: 3694	n:20000
Cons ci ratio: 7.574393e-02	ci left: 1.136089e-01	ci right 1.226025e-01	k: 2361	n:20000
KS ci ratio: 3.959429e-02	ci left: 3.223393e-01	ci right 3.354104e-01	k: 6577	n:20000
KIAA1632   20000 perm   10 sec   (2067 perm/sec)   p_kst 3.288500e-01   p_cons 1.180500e-01   p_joint 1.847000e-01

Outputting figure to mutsig2_images.part000000000091/KIAA1632.3_7916_20000_0.32885_0.11805_0.1847.png
                gene_name: KIAA1632
               theta_stop: 0.076 
                    nperm: 20000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.12 
      ci_cons_bounds_left: 0.11 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.19 

Current progress: 11 percent done.
KIAA1522
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.770819e-02	ci left: 6.574640e-01	ci right 6.760388e-01	k: 6668	n:10000
KS ci ratio: 2.511849e-02	ci left: 6.998865e-01	ci right 7.177916e-01	k: 7089	n:10000
KIAA1522   10000 perm   2 sec   (5302 perm/sec)   p_kst 7.089000e-01   p_cons 6.668000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000091/KIAA1522.2_3313_10000_0.7089_0.6668_1.png
                gene_name: KIAA1522
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.71 
        ci_ks_bounds_left: 0.70 
       ci_ks_bounds_right: 0.72 
                   p_cons: 0.67 
      ci_cons_bounds_left: 0.66 
     ci_cons_bounds_right: 0.68 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 22 percent done.
KIAA1529
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.701956e-02	ci left: 2.462819e-01	ci right 2.634612e-01	k: 2548	n:10000
Cons ci ratio: 6.466872e-02	ci left: 2.599312e-01	ci right 2.774037e-01	k: 2686	n:10000
KS ci ratio: 5.757927e-02	ci left: 3.074877e-01	ci right 3.258192e-01	k: 3166	n:10000
KIAA1529   10000 perm   2 sec   (4764 perm/sec)   p_kst 3.166000e-01   p_cons 2.686000e-01   p_joint 2.548000e-01

Outputting figure to mutsig2_images.part000000000091/KIAA1529.2_5093_10000_0.3166_0.2686_0.2548.png
                gene_name: KIAA1529
               theta_stop: 0.067 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.27 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.28 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.25 
    ci_joint_bounds_right: 0.26 

Current progress: 33 percent done.
KIF1A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.531823e-02	ci left: 4.181748e-01	ci right 4.376672e-01	k: 4279	n:10000
Cons ci ratio: 9.258663e-02	ci left: 1.449173e-01	ci right 1.590860e-01	k: 1519	n:10000
KS ci ratio: 2.246886e-02	ci left: 7.441210e-01	ci right 7.611316e-01	k: 7527	n:10000
KIF1A   10000 perm   2 sec   (4576 perm/sec)   p_kst 7.527000e-01   p_cons 1.519000e-01   p_joint 4.279000e-01

Outputting figure to mutsig2_images.part000000000091/KIF1A.2_5257_10000_0.7527_0.1519_0.4279.png
                gene_name: KIF1A
               theta_stop: 0.093 
                    nperm: 10000 
                     p_ks: 0.75 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.76 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.43 
     ci_joint_bounds_left: 0.42 
    ci_joint_bounds_right: 0.44 

Current progress: 44 percent done.
KIF1B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.461386e-02	ci left: 1.395251e-01	ci right 1.534815e-01	k: 1464	n:10000
Cons ci ratio: 2.618131e-02	ci left: 6.823426e-01	ci right 7.005457e-01	k: 6915	n:10000
KS ci ratio: 1.879096e-01	ci left: 3.777051e-02	ci right 4.569926e-02	k: 416	n:10000
KIF1B   10000 perm   3 sec   (3927 perm/sec)   p_kst 4.160000e-02   p_cons 6.915000e-01   p_joint 1.464000e-01

Joint ci ratio: 7.295216e-02	ci left: 1.215289e-01	ci right 1.307801e-01	k: 2522	n:20000
Cons ci ratio: 1.840731e-02	ci left: 6.875102e-01	ci right 7.003334e-01	k: 13879	n:20000
KS ci ratio: 1.325438e-01	ci left: 3.911656e-02	ci right 4.471761e-02	k: 837	n:20000
KIF1B   20000 perm   6 sec   (3579 perm/sec)   p_kst 4.185000e-02   p_cons 6.939500e-01   p_joint 1.261000e-01

Joint ci ratio: 3.737170e-02	ci left: 2.632922e-01	ci right 2.733527e-01	k: 8049	n:30000
Cons ci ratio: 1.509160e-02	ci left: 6.869417e-01	ci right 6.974211e-01	k: 20766	n:30000
KS ci ratio: 1.082224e-01	ci left: 3.962807e-02	ci right 4.419451e-02	k: 1256	n:30000
KIF1B   30000 perm   9 sec   (3385 perm/sec)   p_kst 4.186667e-02   p_cons 6.922000e-01   p_joint 2.683000e-01

Joint ci ratio: 3.599419e-02	ci left: 2.245666e-01	ci right 2.328228e-01	k: 9147	n:40000
Cons ci ratio: 1.305751e-02	ci left: 6.880518e-01	ci right 6.971202e-01	k: 27704	n:40000
KS ci ratio: 9.479130e-02	ci left: 3.905325e-02	ci right 4.296375e-02	k: 1639	n:40000
KIF1B   40000 perm   12 sec   (3310 perm/sec)   p_kst 4.097500e-02   p_cons 6.926000e-01   p_joint 2.286750e-01

Outputting figure to mutsig2_images.part000000000091/KIF1B.2_6986_40000_0.040975_0.6926_0.22867.png
                gene_name: KIF1B
               theta_stop: 0.095 
                    nperm: 40000 
                     p_ks: 0.041 
        ci_ks_bounds_left: 0.039 
       ci_ks_bounds_right: 0.043 
                   p_cons: 0.69 
      ci_cons_bounds_left: 0.69 
     ci_cons_bounds_right: 0.70 
                  p_joint: 0.23 
     ci_joint_bounds_left: 0.22 
    ci_joint_bounds_right: 0.23 

Current progress: 56 percent done.
KIF25
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.991661e-01	ci left: 1.458544e-03	ci right 3.449143e-03	k: 23	n:10000
Cons ci ratio: 3.232413e-02	ci left: 5.855029e-01	ci right 6.048417e-01	k: 5952	n:10000
KS ci ratio: 1.385306e+00	ci left: 2.814811e-04	ci right 1.441732e-03	k: 7	n:10000
KIF25   10000 perm   1 sec   (6986 perm/sec)   p_kst 7.000000e-04   p_cons 5.952000e-01   p_joint 2.300000e-03

Joint ci ratio: 9.503118e-01	ci left: 4.573361e-04	ci right 1.298826e-03	k: 16	n:20000
Cons ci ratio: 2.296713e-02	ci left: 5.860530e-01	ci right 5.997199e-01	k: 11858	n:20000
KS ci ratio: 8.988600e-01	ci left: 5.334815e-04	ci right 1.422016e-03	k: 18	n:20000
KIF25   20000 perm   3 sec   (6041 perm/sec)   p_kst 9.000000e-04   p_cons 5.929000e-01   p_joint 8.000000e-04

Joint ci ratio: 4.894689e-01	ci left: 1.614063e-03	ci right 2.686024e-03	k: 63	n:30000
Cons ci ratio: 1.869214e-02	ci left: 5.888850e-01	ci right 6.000300e-01	k: 17834	n:30000
KS ci ratio: 6.925834e-01	ci left: 7.022045e-04	ci right 1.466416e-03	k: 31	n:30000
KIF25   30000 perm   5 sec   (5691 perm/sec)   p_kst 1.033333e-03   p_cons 5.944667e-01   p_joint 2.100000e-03

Joint ci ratio: 3.732384e-01	ci left: 2.238026e-03	ci right 3.286237e-03	k: 109	n:40000
Cons ci ratio: 1.610728e-02	ci left: 5.920485e-01	ci right 6.016874e-01	k: 23875	n:40000
KS ci ratio: 6.273885e-01	ci left: 6.723615e-04	ci right 1.303718e-03	k: 38	n:40000
KIF25   40000 perm   7 sec   (5440 perm/sec)   p_kst 9.500000e-04   p_cons 5.968750e-01   p_joint 2.725000e-03

Joint ci ratio: 3.446878e-01	ci left: 2.136179e-03	ci right 3.043112e-03	k: 128	n:50000
Cons ci ratio: 1.435409e-02	ci left: 5.943279e-01	ci right 6.029407e-01	k: 29932	n:50000
KS ci ratio: 5.597199e-01	ci left: 7.079104e-04	ci right 1.272622e-03	k: 48	n:50000
KIF25   50000 perm   9 sec   (5293 perm/sec)   p_kst 9.600000e-04   p_cons 5.986400e-01   p_joint 2.560000e-03

Joint ci ratio: 4.106125e-01	ci left: 1.206344e-03	ci right 1.843438e-03	k: 90	n:60000
Cons ci ratio: 1.311685e-02	ci left: 5.942141e-01	ci right 6.020764e-01	k: 35889	n:60000
KS ci ratio: 5.016452e-01	ci left: 7.631894e-04	ci right 1.287013e-03	k: 60	n:60000
KIF25   60000 perm   12 sec   (5116 perm/sec)   p_kst 1.000000e-03   p_cons 5.981500e-01   p_joint 1.500000e-03

Joint ci ratio: 3.408679e-01	ci left: 1.564926e-03	ci right 2.220326e-03	k: 131	n:70000
Cons ci ratio: 1.259047e-02	ci left: 5.770055e-01	ci right 5.843306e-01	k: 40647	n:70000
KS ci ratio: 4.585587e-01	ci left: 8.048781e-04	ci right 1.295143e-03	k: 72	n:70000
KIF25   70000 perm   14 sec   (4977 perm/sec)   p_kst 1.028571e-03   p_cons 5.806714e-01   p_joint 1.871429e-03

Joint ci ratio: 3.383506e-01	ci left: 1.392156e-03	ci right 1.969947e-03	k: 133	n:80000
Cons ci ratio: 1.179266e-02	ci left: 5.766083e-01	ci right 5.834609e-01	k: 46403	n:80000
KS ci ratio: 4.380474e-01	ci left: 7.818886e-04	ci right 1.230570e-03	k: 79	n:80000
KIF25   80000 perm   16 sec   (4869 perm/sec)   p_kst 9.875000e-04   p_cons 5.800375e-01   p_joint 1.662500e-03

Joint ci ratio: 3.879157e-01	ci left: 9.141585e-04	ci right 1.363437e-03	k: 101	n:90000
Cons ci ratio: 1.111327e-02	ci left: 5.770232e-01	ci right 5.834827e-01	k: 52223	n:90000
KS ci ratio: 4.153114e-01	ci left: 7.842779e-04	ci right 1.204513e-03	k: 88	n:90000
KIF25   90000 perm   19 sec   (4761 perm/sec)   p_kst 9.777778e-04   p_cons 5.802556e-01   p_joint 1.122222e-03

Joint ci ratio: 3.219819e-01	ci left: 1.242111e-03	ci right 1.727543e-03	k: 147	n:100000
Cons ci ratio: 1.052537e-02	ci left: 5.780047e-01	ci right 5.841306e-01	k: 58107	n:100000
KS ci ratio: 3.918020e-01	ci left: 8.046937e-04	ci right 1.205160e-03	k: 99	n:100000
KIF25   100000 perm   21 sec   (4659 perm/sec)   p_kst 9.900000e-04   p_cons 5.810700e-01   p_joint 1.470000e-03

Joint ci ratio: 3.087117e-01	ci left: 1.238024e-03	ci right 1.697996e-03	k: 160	n:110000
Cons ci ratio: 1.004469e-02	ci left: 5.777045e-01	ci right 5.835457e-01	k: 63869	n:110000
KS ci ratio: 3.752801e-01	ci left: 8.054719e-04	ci right 1.185268e-03	k: 108	n:110000
KIF25   110000 perm   24 sec   (4569 perm/sec)   p_kst 9.818182e-04   p_cons 5.806273e-01   p_joint 1.454545e-03

Joint ci ratio: 2.776498e-01	ci left: 1.428318e-03	ci right 1.896294e-03	k: 198	n:120000
Cons ci ratio: 9.643300e-03	ci left: 5.765008e-01	ci right 5.820954e-01	k: 69516	n:120000
KS ci ratio: 3.476582e-01	ci left: 8.747511e-04	ci right 1.250034e-03	k: 126	n:120000
KIF25   120000 perm   27 sec   (4474 perm/sec)   p_kst 1.050000e-03   p_cons 5.793000e-01   p_joint 1.650000e-03

Joint ci ratio: 2.658837e-01	ci left: 1.447481e-03	ci right 1.898292e-03	k: 216	n:130000
Cons ci ratio: 9.268500e-03	ci left: 5.764261e-01	ci right 5.818012e-01	k: 75285	n:130000
KS ci ratio: 3.323110e-01	ci left: 8.918947e-04	ci right 1.254031e-03	k: 138	n:130000
KIF25   130000 perm   30 sec   (4392 perm/sec)   p_kst 1.061538e-03   p_cons 5.791154e-01   p_joint 1.661538e-03

Joint ci ratio: 3.436459e-01	ci left: 7.693474e-04	ci right 1.094752e-03	k: 129	n:140000
Cons ci ratio: 8.921434e-03	ci left: 5.770663e-01	ci right 5.822447e-01	k: 81152	n:140000
KS ci ratio: 3.146865e-01	ci left: 9.332034e-04	ci right 1.287981e-03	k: 154	n:140000
KIF25   140000 perm   32 sec   (4309 perm/sec)   p_kst 1.100000e-03   p_cons 5.796571e-01   p_joint 9.214286e-04

Joint ci ratio: 3.577010e-01	ci left: 6.572534e-04	ci right 9.492675e-04	k: 119	n:150000
Cons ci ratio: 8.607682e-03	ci left: 5.777910e-01	ci right 5.827926e-01	k: 87044	n:150000
KS ci ratio: 3.050027e-01	ci left: 9.324744e-04	ci right 1.273949e-03	k: 164	n:150000
KIF25   150000 perm   35 sec   (4233 perm/sec)   p_kst 1.093333e-03   p_cons 5.802933e-01   p_joint 7.933333e-04

Joint ci ratio: 3.449965e-01	ci left: 6.674630e-04	ci right 9.511307e-04	k: 128	n:160000
Cons ci ratio: 8.342051e-03	ci left: 5.774207e-01	ci right 5.822639e-01	k: 92775	n:160000
KS ci ratio: 2.920142e-01	ci left: 9.609296e-04	ci right 1.295071e-03	k: 179	n:160000
KIF25   160000 perm   39 sec   (4155 perm/sec)   p_kst 1.118750e-03   p_cons 5.798437e-01   p_joint 8.000000e-04

Joint ci ratio: 3.463508e-01	ci left: 6.228262e-04	ci right 8.887952e-04	k: 127	n:170000
Cons ci ratio: 8.095369e-03	ci left: 5.773493e-01	ci right 5.820480e-01	k: 98549	n:170000
KS ci ratio: 2.834810e-01	ci left: 9.644418e-04	ci right 1.288252e-03	k: 190	n:170000
KIF25   170000 perm   42 sec   (4082 perm/sec)   p_kst 1.117647e-03   p_cons 5.797000e-01   p_joint 7.470588e-04

Joint ci ratio: 3.385094e-01	ci left: 6.186917e-04	ci right 8.756070e-04	k: 133	n:180000
Cons ci ratio: 7.864239e-03	ci left: 5.776047e-01	ci right 5.821705e-01	k: 104380	n:180000
KS ci ratio: 2.749741e-01	ci left: 9.728621e-04	ci right 1.288004e-03	k: 202	n:180000
KIF25   180000 perm   45 sec   (4009 perm/sec)   p_kst 1.122222e-03   p_cons 5.798889e-01   p_joint 7.388889e-04

Joint ci ratio: 3.311775e-01	ci left: 6.150531e-04	ci right 8.637469e-04	k: 139	n:190000
Cons ci ratio: 7.664408e-03	ci left: 5.770343e-01	ci right 5.814791e-01	k: 110059	n:190000
KS ci ratio: 2.690758e-01	ci left: 9.657965e-04	ci right 1.270806e-03	k: 211	n:190000
KIF25   190000 perm   48 sec   (3941 perm/sec)   p_kst 1.110526e-03   p_cons 5.792579e-01   p_joint 7.315789e-04

Joint ci ratio: 3.265482e-01	ci left: 6.026487e-04	ci right 8.422061e-04	k: 143	n:200000
Cons ci ratio: 7.474909e-03	ci left: 5.767926e-01	ci right 5.811252e-01	k: 115792	n:200000
KS ci ratio: 2.647433e-01	ci left: 9.501639e-04	ci right 1.244604e-03	k: 218	n:200000
KIF25   200000 perm   52 sec   (3872 perm/sec)   p_kst 1.090000e-03   p_cons 5.789600e-01   p_joint 7.150000e-04

Joint ci ratio: 2.462992e-01	ci left: 1.056475e-03	ci right 1.357565e-03	k: 252	n:210000
Cons ci ratio: 7.295664e-03	ci left: 5.767848e-01	ci right 5.810130e-01	k: 121569	n:210000
KS ci ratio: 2.561150e-01	ci left: 9.716864e-04	ci right 1.261415e-03	k: 233	n:210000
KIF25   210000 perm   55 sec   (3809 perm/sec)   p_kst 1.109524e-03   p_cons 5.789000e-01   p_joint 1.200000e-03

Joint ci ratio: 3.088255e-01	ci left: 6.189799e-04	ci right 8.490499e-04	k: 160	n:220000
Cons ci ratio: 7.127528e-03	ci left: 5.768608e-01	ci right 5.809916e-01	k: 127364	n:220000
KS ci ratio: 2.523705e-01	ci left: 9.573088e-04	ci right 1.237921e-03	k: 240	n:220000
KIF25   220000 perm   59 sec   (3750 perm/sec)   p_kst 1.090909e-03   p_cons 5.789273e-01   p_joint 7.272727e-04

Joint ci ratio: 3.014270e-01	ci left: 6.241882e-04	ci right 8.495714e-04	k: 168	n:230000
Cons ci ratio: 6.968082e-03	ci left: 5.771009e-01	ci right 5.811406e-01	k: 133198	n:230000
KS ci ratio: 2.468009e-01	ci left: 9.605219e-04	ci right 1.234909e-03	k: 251	n:230000
KIF25   230000 perm   62 sec   (3695 perm/sec)   p_kst 1.091304e-03   p_cons 5.791217e-01   p_joint 7.304348e-04

Joint ci ratio: 2.970661e-01	ci left: 6.174495e-04	ci right 8.365659e-04	k: 173	n:240000
Cons ci ratio: 6.823541e-03	ci left: 5.769884e-01	ci right 5.809431e-01	k: 138952	n:240000
KS ci ratio: 2.439168e-01	ci left: 9.439621e-04	ci right 1.209990e-03	k: 257	n:240000
KIF25   240000 perm   66 sec   (3638 perm/sec)   p_kst 1.070833e-03   p_cons 5.789667e-01   p_joint 7.208333e-04

Joint ci ratio: 2.904634e-01	ci left: 6.223941e-04	ci right 8.374541e-04	k: 181	n:250000
Cons ci ratio: 6.686318e-03	ci left: 5.769817e-01	ci right 5.808565e-01	k: 144730	n:250000
KS ci ratio: 2.384343e-01	ci left: 9.513038e-04	ci right 1.212485e-03	k: 269	n:250000
KIF25   250000 perm   70 sec   (3583 perm/sec)   p_kst 1.076000e-03   p_cons 5.789200e-01   p_joint 7.240000e-04

Joint ci ratio: 2.842822e-01	ci left: 6.270080e-04	ci right 8.382247e-04	k: 189	n:260000
Cons ci ratio: 6.560987e-03	ci left: 5.766838e-01	ci right 5.804837e-01	k: 150432	n:260000
KS ci ratio: 2.333055e-01	ci left: 9.581422e-04	ci right 1.214727e-03	k: 281	n:260000
KIF25   260000 perm   74 sec   (3527 perm/sec)   p_kst 1.080769e-03   p_cons 5.785846e-01   p_joint 7.269231e-04

Joint ci ratio: 2.813379e-01	ci left: 6.175492e-04	ci right 8.230429e-04	k: 193	n:270000
Cons ci ratio: 6.441807e-03	ci left: 5.764568e-01	ci right 5.801859e-01	k: 156147	n:270000
KS ci ratio: 2.284941e-01	ci left: 9.645297e-04	ci right 1.216747e-03	k: 293	n:270000
KIF25   270000 perm   78 sec   (3476 perm/sec)   p_kst 1.085185e-03   p_cons 5.783222e-01   p_joint 7.148148e-04

Joint ci ratio: 2.508425e-01	ci left: 7.621999e-04	ci right 9.840552e-04	k: 243	n:280000
Cons ci ratio: 6.327130e-03	ci left: 5.763825e-01	ci right 5.800444e-01	k: 161900	n:280000
KS ci ratio: 2.243359e-01	ci left: 9.671401e-04	ci right 1.214801e-03	k: 304	n:280000
KIF25   280000 perm   82 sec   (3426 perm/sec)   p_kst 1.085714e-03   p_cons 5.782143e-01   p_joint 8.678571e-04

Joint ci ratio: 2.468291e-01	ci left: 7.617832e-04	ci right 9.794253e-04	k: 251	n:290000
Cons ci ratio: 6.219114e-03	ci left: 5.762552e-01	ci right 5.798536e-01	k: 167636	n:290000
KS ci ratio: 2.214515e-01	ci left: 9.598361e-04	ci right 1.202036e-03	k: 312	n:290000
KIF25   290000 perm   86 sec   (3379 perm/sec)   p_kst 1.075862e-03   p_cons 5.780552e-01   p_joint 8.655172e-04

Joint ci ratio: 2.513658e-01	ci left: 7.082605e-04	ci right 9.149127e-04	k: 242	n:300000
Cons ci ratio: 6.113604e-03	ci left: 5.763637e-01	ci right 5.799015e-01	k: 173440	n:300000
KS ci ratio: 2.176598e-01	ci left: 9.624922e-04	ci right 1.200648e-03	k: 323	n:300000
KIF25   300000 perm   90 sec   (3332 perm/sec)   p_kst 1.076667e-03   p_cons 5.781333e-01   p_joint 8.066667e-04

Joint ci ratio: 2.478222e-01	ci left: 7.065816e-04	ci right 9.093896e-04	k: 249	n:310000
Cons ci ratio: 6.013488e-03	ci left: 5.764495e-01	ci right 5.799296e-01	k: 179239	n:310000
KS ci ratio: 2.143769e-01	ci left: 9.619569e-04	ci right 1.195918e-03	k: 333	n:310000
KIF25   310000 perm   94 sec   (3286 perm/sec)   p_kst 1.074194e-03   p_cons 5.781903e-01   p_joint 8.032258e-04

Joint ci ratio: 2.434780e-01	ci left: 7.108950e-04	ci right 9.108237e-04	k: 258	n:320000
Cons ci ratio: 5.696290e-03	ci left: 5.950573e-01	ci right 5.984597e-01	k: 190963	n:320000
KS ci ratio: 2.115463e-01	ci left: 9.585206e-04	ci right 1.188169e-03	k: 342	n:320000
KIF25   320000 perm   99 sec   (3241 perm/sec)   p_kst 1.068750e-03   p_cons 5.967594e-01   p_joint 8.062500e-04

Joint ci ratio: 2.389088e-01	ci left: 7.178249e-04	ci right 9.153534e-04	k: 268	n:330000
Cons ci ratio: 5.608281e-03	ci left: 5.951725e-01	ci right 5.985228e-01	k: 196960	n:330000
KS ci ratio: 2.091225e-01	ci left: 9.524397e-04	ci right 1.177682e-03	k: 350	n:330000
KIF25   330000 perm   103 sec   (3197 perm/sec)   p_kst 1.060606e-03   p_cons 5.968485e-01   p_joint 8.121212e-04

Joint ci ratio: 2.362889e-01	ci left: 7.133088e-04	ci right 9.071272e-04	k: 274	n:340000
Cons ci ratio: 5.523587e-03	ci left: 5.953372e-01	ci right 5.986376e-01	k: 202976	n:340000
KS ci ratio: 2.053535e-01	ci left: 9.606784e-04	ci right 1.183260e-03	k: 363	n:340000
KIF25   340000 perm   108 sec   (3154 perm/sec)   p_kst 1.067647e-03   p_cons 5.969882e-01   p_joint 8.058824e-04

Joint ci ratio: 2.325145e-01	ci left: 7.171330e-04	ci right 9.084307e-04	k: 283	n:350000
Cons ci ratio: 5.441744e-03	ci left: 5.955700e-01	ci right 5.988226e-01	k: 209019	n:350000
KS ci ratio: 2.023192e-01	ci left: 9.630551e-04	ci right 1.182483e-03	k: 374	n:350000
KIF25   350000 perm   112 sec   (3114 perm/sec)   p_kst 1.068571e-03   p_cons 5.971971e-01   p_joint 8.085714e-04

Joint ci ratio: 2.304953e-01	ci left: 7.102958e-04	ci right 8.978899e-04	k: 288	n:360000
Cons ci ratio: 5.363804e-03	ci left: 5.957569e-01	ci right 5.989638e-01	k: 215050	n:360000
KS ci ratio: 2.009853e-01	ci left: 9.494905e-04	ci right 1.164226e-03	k: 379	n:360000
KIF25   360000 perm   117 sec   (3075 perm/sec)   p_kst 1.052778e-03   p_cons 5.973611e-01   p_joint 8.000000e-04

Joint ci ratio: 2.273699e-01	ci left: 7.114803e-04	ci right 8.964820e-04	k: 296	n:370000
Cons ci ratio: 5.294053e-03	ci left: 5.954850e-01	ci right 5.986486e-01	k: 220915	n:370000
KS ci ratio: 1.983920e-01	ci left: 9.495043e-04	ci right 1.161137e-03	k: 389	n:370000
KIF25   370000 perm   122 sec   (3036 perm/sec)   p_kst 1.051351e-03   p_cons 5.970676e-01   p_joint 8.000000e-04

Joint ci ratio: 2.258552e-01	ci left: 7.026856e-04	ci right 8.840138e-04	k: 300	n:380000
Cons ci ratio: 5.223207e-03	ci left: 5.955727e-01	ci right 5.986942e-01	k: 226911	n:380000
KS ci ratio: 1.956519e-01	ci left: 9.520369e-04	ci right 1.160955e-03	k: 400	n:380000
KIF25   380000 perm   127 sec   (2998 perm/sec)   p_kst 1.052632e-03   p_cons 5.971342e-01   p_joint 7.894737e-04

Joint ci ratio: 2.229124e-01	ci left: 7.040280e-04	ci right 8.830105e-04	k: 308	n:390000
Cons ci ratio: 5.154581e-03	ci left: 5.957075e-01	ci right 5.987885e-01	k: 232927	n:390000
KS ci ratio: 1.930223e-01	ci left: 9.544587e-04	ci right 1.160762e-03	k: 411	n:390000
KIF25   390000 perm   132 sec   (2960 perm/sec)   p_kst 1.053846e-03   p_cons 5.972487e-01   p_joint 7.897436e-04

Joint ci ratio: 2.204298e-01	ci left: 7.029556e-04	ci right 8.794054e-04	k: 315	n:400000
Cons ci ratio: 5.091236e-03	ci left: 5.955856e-01	ci right 5.986280e-01	k: 238843	n:400000
KS ci ratio: 1.904959e-01	ci left: 9.567771e-04	ci right 1.160562e-03	k: 422	n:400000
KIF25   400000 perm   137 sec   (2922 perm/sec)   p_kst 1.055000e-03   p_cons 5.971075e-01   p_joint 7.875000e-04

Joint ci ratio: 2.289267e-01	ci left: 6.328660e-04	ci right 7.987119e-04	k: 292	n:410000
Cons ci ratio: 5.028792e-03	ci left: 5.956016e-01	ci right 5.986067e-01	k: 244813	n:410000
KS ci ratio: 1.882834e-01	ci left: 9.566750e-04	ci right 1.157800e-03	k: 432	n:410000
KIF25   410000 perm   142 sec   (2887 perm/sec)   p_kst 1.053659e-03   p_cons 5.971049e-01   p_joint 7.121951e-04

Joint ci ratio: 2.258638e-01	ci left: 6.357606e-04	ci right 7.998256e-04	k: 300	n:420000
Cons ci ratio: 4.972329e-03	ci left: 5.952551e-01	ci right 5.982246e-01	k: 250631	n:420000
KS ci ratio: 1.857271e-01	ci left: 9.611311e-04	ci right 1.160141e-03	k: 444	n:420000
KIF25   420000 perm   147 sec   (2852 perm/sec)   p_kst 1.057143e-03   p_cons 5.967405e-01   p_joint 7.142857e-04

Joint ci ratio: 2.118848e-01	ci left: 7.111055e-04	ci right 8.817835e-04	k: 341	n:430000
Cons ci ratio: 4.912044e-03	ci left: 5.954809e-01	ci right 5.984154e-01	k: 256688	n:430000
KS ci ratio: 1.840804e-01	ci left: 9.565225e-04	ci right 1.152626e-03	k: 452	n:430000
KIF25   430000 perm   153 sec   (2819 perm/sec)   p_kst 1.051163e-03   p_cons 5.969488e-01   p_joint 7.930233e-04

Joint ci ratio: 2.091504e-01	ci left: 7.143204e-04	ci right 8.832741e-04	k: 350	n:440000
Cons ci ratio: 4.855687e-03	ci left: 5.955194e-01	ci right 5.984203e-01	k: 262667	n:440000
KS ci ratio: 1.816894e-01	ci left: 9.608078e-04	ci right 1.154950e-03	k: 464	n:440000
KIF25   440000 perm   158 sec   (2784 perm/sec)   p_kst 1.054545e-03   p_cons 5.969705e-01   p_joint 7.954545e-04

Joint ci ratio: 2.015381e-01	ci left: 7.553641e-04	ci right 9.267236e-04	k: 377	n:450000
Cons ci ratio: 4.800738e-03	ci left: 5.956052e-01	ci right 5.984736e-01	k: 268668	n:450000
KS ci ratio: 1.795777e-01	ci left: 9.627958e-04	ci right 1.154833e-03	k: 475	n:450000
KIF25   450000 perm   163 sec   (2753 perm/sec)   p_kst 1.055556e-03   p_cons 5.970400e-01   p_joint 8.377778e-04

Joint ci ratio: 1.994388e-01	ci left: 7.554614e-04	ci right 9.248407e-04	k: 385	n:460000
Cons ci ratio: 4.747849e-03	ci left: 5.956635e-01	ci right 5.985005e-01	k: 274658	n:460000
KS ci ratio: 1.780879e-01	ci left: 9.584781e-04	ci right 1.147897e-03	k: 483	n:460000
KIF25   460000 perm   169 sec   (2722 perm/sec)   p_kst 1.050000e-03   p_cons 5.970826e-01   p_joint 8.369565e-04

Joint ci ratio: 1.976549e-01	ci left: 7.535409e-04	ci right 9.207964e-04	k: 392	n:470000
Cons ci ratio: 4.697605e-03	ci left: 5.956237e-01	ci right 5.984304e-01	k: 280603	n:470000
KS ci ratio: 1.771761e-01	ci left: 9.482497e-04	ci right 1.134585e-03	k: 488	n:470000
KIF25   470000 perm   175 sec   (2693 perm/sec)   p_kst 1.038298e-03   p_cons 5.970277e-01   p_joint 8.340426e-04

Joint ci ratio: 1.969059e-01	ci left: 7.437831e-04	ci right 9.081720e-04	k: 395	n:480000
Cons ci ratio: 4.649386e-03	ci left: 5.955378e-01	ci right 5.983152e-01	k: 286525	n:480000
KS ci ratio: 1.757448e-01	ci left: 9.444249e-04	ci right 1.128350e-03	k: 496	n:480000
KIF25   480000 perm   180 sec   (2663 perm/sec)   p_kst 1.033333e-03   p_cons 5.969271e-01   p_joint 8.229167e-04

Joint ci ratio: 1.930431e-01	ci left: 7.596637e-04	ci right 9.238820e-04	k: 411	n:490000
Cons ci ratio: 4.778068e-03	ci left: 5.773201e-01	ci right 5.800872e-01	k: 283565	n:490000
KS ci ratio: 1.734900e-01	ci left: 9.505223e-04	ci right 1.133011e-03	k: 509	n:490000
KIF25   490000 perm   186 sec   (2633 perm/sec)   p_kst 1.038776e-03   p_cons 5.787041e-01   p_joint 8.387755e-04

Joint ci ratio: 1.918830e-01	ci left: 7.539883e-04	ci right 9.158859e-04	k: 416	n:500000
Cons ci ratio: 4.730299e-03	ci left: 5.773079e-01	ci right 5.800472e-01	k: 289339	n:500000
KS ci ratio: 1.718138e-01	ci left: 9.506476e-04	ci right 1.131214e-03	k: 519	n:500000
KIF25   500000 perm   192 sec   (2604 perm/sec)   p_kst 1.038000e-03   p_cons 5.786780e-01   p_joint 8.320000e-04

Joint ci ratio: 1.976614e-01	ci left: 6.944375e-04	ci right 8.485799e-04	k: 392	n:510000
Cons ci ratio: 4.681544e-03	ci left: 5.775455e-01	ci right 5.802575e-01	k: 295240	n:510000
KS ci ratio: 1.703462e-01	ci left: 9.488988e-04	ci right 1.127436e-03	k: 528	n:510000
KIF25   510000 perm   198 sec   (2575 perm/sec)   p_kst 1.035294e-03   p_cons 5.789020e-01   p_joint 7.686275e-04

Joint ci ratio: 1.971615e-01	ci left: 6.847387e-04	ci right 8.362976e-04	k: 394	n:520000
Cons ci ratio: 4.636731e-03	ci left: 5.775143e-01	ci right 5.802002e-01	k: 301006	n:520000
KS ci ratio: 1.689156e-01	ci left: 9.472236e-04	ci right 1.123796e-03	k: 537	n:520000
KIF25   520000 perm   204 sec   (2548 perm/sec)   p_kst 1.032692e-03   p_cons 5.788577e-01   p_joint 7.576923e-04

Joint ci ratio: 2.065318e-01	ci left: 6.091146e-04	ci right 7.511527e-04	k: 359	n:530000
Cons ci ratio: 4.592524e-03	ci left: 5.775543e-01	ci right 5.802147e-01	k: 306809	n:530000
KS ci ratio: 1.670625e-01	ci left: 9.510412e-04	ci right 1.126185e-03	k: 549	n:530000
KIF25   530000 perm   210 sec   (2521 perm/sec)   p_kst 1.035849e-03   p_cons 5.788849e-01   p_joint 6.773585e-04

Joint ci ratio: 1.935213e-01	ci left: 6.857974e-04	ci right 8.344581e-04	k: 409	n:540000
Cons ci ratio: 4.550042e-03	ci left: 5.775410e-01	ci right 5.801767e-01	k: 312584	n:540000
KS ci ratio: 1.663090e-01	ci left: 9.423020e-04	ci right 1.114975e-03	k: 554	n:540000
KIF25   540000 perm   216 sec   (2495 perm/sec)   p_kst 1.025926e-03   p_cons 5.788593e-01   p_joint 7.574074e-04

Joint ci ratio: 2.031736e-01	ci left: 6.076640e-04	ci right 7.467739e-04	k: 371	n:550000
Cons ci ratio: 4.508885e-03	ci left: 5.775102e-01	ci right 5.801217e-01	k: 318349	n:550000
KS ci ratio: 1.654180e-01	ci left: 9.356252e-04	ci right 1.106065e-03	k: 560	n:550000
KIF25   550000 perm   223 sec   (2468 perm/sec)   p_kst 1.018182e-03   p_cons 5.788164e-01   p_joint 6.745455e-04

Joint ci ratio: 1.689218e-01	ci left: 8.795622e-04	ci right 1.043528e-03	k: 537	n:560000
Cons ci ratio: 4.468596e-03	ci left: 5.775055e-01	ci right 5.800937e-01	k: 324128	n:560000
KS ci ratio: 1.622651e-01	ci left: 9.565935e-04	ci right 1.127208e-03	k: 582	n:560000
KIF25   560000 perm   229 sec   (2442 perm/sec)   p_kst 1.039286e-03   p_cons 5.788000e-01   p_joint 9.589286e-04

Joint ci ratio: 1.676800e-01	ci left: 8.775751e-04	ci right 1.039847e-03	k: 545	n:570000
Cons ci ratio: 4.428555e-03	ci left: 5.775906e-01	ci right 5.801559e-01	k: 329958	n:570000
KS ci ratio: 1.611635e-01	ci left: 9.532781e-04	ci right 1.122035e-03	k: 590	n:570000
KIF25   570000 perm   236 sec   (2417 perm/sec)   p_kst 1.035088e-03   p_cons 5.788737e-01   p_joint 9.561404e-04

Joint ci ratio: 1.669181e-01	ci left: 8.707040e-04	ci right 1.030900e-03	k: 550	n:580000
Cons ci ratio: 4.390813e-03	ci left: 5.775349e-01	ci right 5.800781e-01	k: 335708	n:580000
KS ci ratio: 1.603522e-01	ci left: 9.467707e-04	ci right 1.113450e-03	k: 596	n:580000
KIF25   580000 perm   242 sec   (2393 perm/sec)   p_kst 1.027586e-03   p_cons 5.788069e-01   p_joint 9.482759e-04

Joint ci ratio: 1.845149e-01	ci left: 6.938843e-04	ci right 8.365152e-04	k: 450	n:590000
Cons ci ratio: 4.353672e-03	ci left: 5.775202e-01	ci right 5.800417e-01	k: 341481	n:590000
KS ci ratio: 1.590259e-01	ci left: 9.469956e-04	ci right 1.112204e-03	k: 606	n:590000
KIF25   590000 perm   249 sec   (2369 perm/sec)   p_kst 1.027119e-03   p_cons 5.787814e-01   p_joint 7.627119e-04

Joint ci ratio: 1.828998e-01	ci left: 6.950398e-04	ci right 8.365191e-04	k: 458	n:600000
Cons ci ratio: 4.316646e-03	ci left: 5.775978e-01	ci right 5.800981e-01	k: 347309	n:600000
KS ci ratio: 1.577320e-01	ci left: 9.472184e-04	ci right 1.110994e-03	k: 616	n:600000
KIF25   600000 perm   256 sec   (2345 perm/sec)   p_kst 1.026667e-03   p_cons 5.788483e-01   p_joint 7.633333e-04

Joint ci ratio: 1.823057e-01	ci left: 6.883387e-04	ci right 8.279485e-04	k: 461	n:610000
Cons ci ratio: 4.281773e-03	ci left: 5.775335e-01	ci right 5.800133e-01	k: 353052	n:610000
KS ci ratio: 1.570974e-01	ci left: 9.395638e-04	ci right 1.101301e-03	k: 621	n:610000
KIF25   610000 perm   263 sec   (2321 perm/sec)   p_kst 1.018033e-03   p_cons 5.787738e-01   p_joint 7.557377e-04

Joint ci ratio: 1.743665e-01	ci left: 7.434988e-04	ci right 8.870382e-04	k: 504	n:620000
Cons ci ratio: 4.246171e-03	ci left: 5.776505e-01	ci right 5.801101e-01	k: 358906	n:620000
KS ci ratio: 1.558496e-01	ci left: 9.399071e-04	ci right 1.100298e-03	k: 631	n:620000
KIF25   620000 perm   270 sec   (2296 perm/sec)   p_kst 1.017742e-03   p_cons 5.788806e-01   p_joint 8.129032e-04

Joint ci ratio: 1.724976e-01	ci left: 7.483998e-04	ci right 8.911755e-04	k: 515	n:630000
Cons ci ratio: 4.213129e-03	ci left: 5.775685e-01	ci right 5.800086e-01	k: 364637	n:630000
KS ci ratio: 1.539128e-01	ci left: 9.494008e-04	ci right 1.109213e-03	k: 647	n:630000
KIF25   630000 perm   277 sec   (2273 perm/sec)   p_kst 1.026984e-03   p_cons 5.787889e-01   p_joint 8.174603e-04

Joint ci ratio: 1.716683e-01	ci left: 7.441819e-04	ci right 8.853997e-04	k: 520	n:640000
Cons ci ratio: 4.180566e-03	ci left: 5.775220e-01	ci right 5.799429e-01	k: 370389	n:640000
KS ci ratio: 1.532057e-01	ci left: 9.435810e-04	ci right 1.101617e-03	k: 653	n:640000
KIF25   640000 perm   284 sec   (2250 perm/sec)   p_kst 1.020312e-03   p_cons 5.787328e-01   p_joint 8.125000e-04

Joint ci ratio: 1.775655e-01	ci left: 6.827088e-04	ci right 8.171898e-04	k: 486	n:650000
Cons ci ratio: 4.148065e-03	ci left: 5.775570e-01	ci right 5.799592e-01	k: 376193	n:650000
KS ci ratio: 1.518190e-01	ci left: 9.468215e-04	ci right 1.103834e-03	k: 665	n:650000
KIF25   650000 perm   292 sec   (2228 perm/sec)   p_kst 1.023077e-03   p_cons 5.787585e-01   p_joint 7.476923e-04

Joint ci ratio: 1.766612e-01	ci left: 6.796045e-04	ci right 8.127196e-04	k: 491	n:660000
Cons ci ratio: 4.116886e-03	ci left: 5.775228e-01	ci right 5.799068e-01	k: 381952	n:660000
KS ci ratio: 1.509155e-01	ci left: 9.441377e-04	ci right 1.099689e-03	k: 673	n:660000
KIF25   660000 perm   299 sec   (2207 perm/sec)   p_kst 1.019697e-03   p_cons 5.787152e-01   p_joint 7.439394e-04

Joint ci ratio: 1.754178e-01	ci left: 6.794486e-04	ci right 8.114971e-04	k: 498	n:670000
Cons ci ratio: 4.085712e-03	ci left: 5.775718e-01	ci right 5.799379e-01	k: 387766	n:670000
KS ci ratio: 1.492632e-01	ci left: 9.515937e-04	ci right 1.106504e-03	k: 688	n:670000
KIF25   670000 perm   306 sec   (2186 perm/sec)   p_kst 1.026866e-03   p_cons 5.787552e-01   p_joint 7.432836e-04

Joint ci ratio: 1.658786e-01	ci left: 7.525208e-04	ci right 8.900244e-04	k: 557	n:680000
Cons ci ratio: 4.055932e-03	ci left: 5.775356e-01	ci right 5.798843e-01	k: 393523	n:680000
KS ci ratio: 1.473500e-01	ci left: 9.630884e-04	ci right 1.117684e-03	k: 706	n:680000
KIF25   680000 perm   314 sec   (2166 perm/sec)   p_kst 1.038235e-03   p_cons 5.787103e-01   p_joint 8.191176e-04

Joint ci ratio: 1.648480e-01	ci left: 7.513398e-04	ci right 8.876900e-04	k: 564	n:690000
Cons ci ratio: 4.026507e-03	ci left: 5.775353e-01	ci right 5.798669e-01	k: 399304	n:690000
KS ci ratio: 1.463189e-01	ci left: 9.630909e-04	ci right 1.116510e-03	k: 716	n:690000
KIF25   690000 perm   322 sec   (2146 perm/sec)   p_kst 1.037681e-03   p_cons 5.787014e-01   p_joint 8.173913e-04

Joint ci ratio: 1.636932e-01	ci left: 7.515651e-04	ci right 8.869067e-04	k: 572	n:700000
Cons ci ratio: 3.997350e-03	ci left: 5.775794e-01	ci right 5.798942e-01	k: 405116	n:700000
KS ci ratio: 1.453091e-01	ci left: 9.630970e-04	ci right 1.115366e-03	k: 726	n:700000
KIF25   700000 perm   329 sec   (2126 perm/sec)   p_kst 1.037143e-03   p_cons 5.787371e-01   p_joint 8.171429e-04

Joint ci ratio: 1.629840e-01	ci left: 7.477340e-04	ci right 8.817450e-04	k: 577	n:710000
Cons ci ratio: 3.969815e-03	ci left: 5.774997e-01	ci right 5.797982e-01	k: 410841	n:710000
KS ci ratio: 1.445164e-01	ci left: 9.603912e-04	ci right 1.111333e-03	k: 734	n:710000
KIF25   710000 perm   337 sec   (2106 perm/sec)   p_kst 1.033803e-03   p_cons 5.786493e-01   p_joint 8.126761e-04

Joint ci ratio: 1.615919e-01	ci left: 7.506737e-04	ci right 8.839509e-04	k: 587	n:720000
Cons ci ratio: 3.942190e-03	ci left: 5.775029e-01	ci right 5.797854e-01	k: 416624	n:720000
KS ci ratio: 1.432548e-01	ci left: 9.644582e-04	ci right 1.114603e-03	k: 747	n:720000
KIF25   720000 perm   345 sec   (2086 perm/sec)   p_kst 1.037500e-03   p_cons 5.786444e-01   p_joint 8.152778e-04

Joint ci ratio: 1.603692e-01	ci left: 7.522226e-04	ci right 8.846670e-04	k: 596	n:730000
Cons ci ratio: 3.914452e-03	ci left: 5.775910e-01	ci right 5.798577e-01	k: 422469	n:730000
KS ci ratio: 1.425895e-01	ci left: 9.604924e-04	ci right 1.109266e-03	k: 754	n:730000
KIF25   730000 perm   353 sec   (2068 perm/sec)   p_kst 1.032877e-03   p_cons 5.787247e-01   p_joint 8.164384e-04

Joint ci ratio: 1.589116e-01	ci left: 7.563286e-04	ci right 8.881701e-04	k: 607	n:740000
Cons ci ratio: 3.887797e-03	ci left: 5.776132e-01	ci right 5.798645e-01	k: 428267	n:740000
KS ci ratio: 1.414695e-01	ci left: 9.631529e-04	ci right 1.111068e-03	k: 766	n:740000
KIF25   740000 perm   361 sec   (2050 perm/sec)   p_kst 1.035135e-03   p_cons 5.787392e-01   p_joint 8.202703e-04

Joint ci ratio: 1.419344e-01	ci left: 9.438798e-04	ci right 1.089352e-03	k: 761	n:750000
Cons ci ratio: 3.861944e-03	ci left: 5.776016e-01	ci right 5.798378e-01	k: 434040	n:750000
KS ci ratio: 1.397484e-01	ci left: 9.747534e-04	ci right 1.122477e-03	k: 785	n:750000
KIF25   750000 perm   369 sec   (2032 perm/sec)   p_kst 1.046667e-03   p_cons 5.787200e-01   p_joint 1.014667e-03

Joint ci ratio: 1.621483e-01	ci left: 7.061133e-04	ci right 8.319527e-04	k: 583	n:760000
Cons ci ratio: 3.836247e-03	ci left: 5.776350e-01	ci right 5.798565e-01	k: 439847	n:760000
KS ci ratio: 1.387806e-01	ci left: 9.758971e-04	ci right 1.122685e-03	k: 796	n:760000
KIF25   760000 perm   377 sec   (2015 perm/sec)   p_kst 1.047368e-03   p_cons 5.787461e-01   p_joint 7.671053e-04

Joint ci ratio: 1.615962e-01	ci left: 7.019272e-04	ci right 8.265534e-04	k: 587	n:770000
Cons ci ratio: 3.811991e-03	ci left: 5.775481e-01	ci right 5.797552e-01	k: 445562	n:770000
KS ci ratio: 1.379181e-01	ci left: 9.757606e-04	ci right 1.121541e-03	k: 806	n:770000
KIF25   770000 perm   385 sec   (1998 perm/sec)   p_kst 1.046753e-03   p_cons 5.786519e-01   p_joint 7.623377e-04

Joint ci ratio: 1.602392e-01	ci left: 7.052325e-04	ci right 8.292928e-04	k: 597	n:780000
Cons ci ratio: 3.787720e-03	ci left: 5.775238e-01	ci right 5.797167e-01	k: 451324	n:780000
KS ci ratio: 1.363219e-01	ci left: 9.867746e-04	ci right 1.132356e-03	k: 825	n:780000
KIF25   780000 perm   394 sec   (1981 perm/sec)   p_kst 1.057692e-03   p_cons 5.786205e-01   p_joint 7.653846e-04

Joint ci ratio: 1.591779e-01	ci left: 7.060274e-04	ci right 8.293263e-04	k: 605	n:790000
Cons ci ratio: 3.763106e-03	ci left: 5.776039e-01	ci right 5.797828e-01	k: 457168	n:790000
KS ci ratio: 1.355854e-01	ci left: 9.852887e-04	ci right 1.129802e-03	k: 834	n:790000
KIF25   790000 perm   402 sec   (1964 perm/sec)   p_kst 1.055696e-03   p_cons 5.786937e-01   p_joint 7.658228e-04

Joint ci ratio: 1.580088e-01	ci left: 7.080056e-04	ci right 8.306558e-04	k: 614	n:800000
Cons ci ratio: 3.739407e-03	ci left: 5.776246e-01	ci right 5.797898e-01	k: 462966	n:800000
KS ci ratio: 1.347808e-01	ci left: 9.850498e-04	ci right 1.128602e-03	k: 844	n:800000
KIF25   800000 perm   411 sec   (1947 perm/sec)   p_kst 1.055000e-03   p_cons 5.787075e-01   p_joint 7.675000e-04

Joint ci ratio: 1.572438e-01	ci left: 7.063800e-04	ci right 8.281002e-04	k: 620	n:810000
Cons ci ratio: 3.716677e-03	ci left: 5.775756e-01	ci right 5.797275e-01	k: 468708	n:810000
KS ci ratio: 1.341475e-01	ci left: 9.824329e-04	ci right 1.124878e-03	k: 852	n:810000
KIF25   810000 perm   419 sec   (1932 perm/sec)   p_kst 1.051852e-03   p_cons 5.786519e-01   p_joint 7.654321e-04

Joint ci ratio: 1.563650e-01	ci left: 7.059672e-04	ci right 8.268727e-04	k: 627	n:820000
Cons ci ratio: 3.693672e-03	ci left: 5.776182e-01	ci right 5.797569e-01	k: 474524	n:820000
KS ci ratio: 1.334455e-01	ci left: 9.810602e-04	ci right 1.122502e-03	k: 861	n:820000
KIF25   820000 perm   428 sec   (1916 perm/sec)   p_kst 1.050000e-03   p_cons 5.786878e-01   p_joint 7.646341e-04

Joint ci ratio: 1.489538e-01	ci left: 7.716282e-04	ci right 8.969580e-04	k: 691	n:830000
Cons ci ratio: 3.672587e-03	ci left: 5.774609e-01	ci right 5.795867e-01	k: 480175	n:830000
KS ci ratio: 1.324502e-01	ci left: 9.843820e-04	ci right 1.125162e-03	k: 874	n:830000
KIF25   830000 perm   437 sec   (1901 perm/sec)   p_kst 1.053012e-03   p_cons 5.785241e-01   p_joint 8.325301e-04

Joint ci ratio: 1.484189e-01	ci left: 7.681730e-04	ci right 8.924537e-04	k: 696	n:840000
Cons ci ratio: 3.650315e-03	ci left: 5.775134e-01	ci right 5.796265e-01	k: 485999	n:840000
KS ci ratio: 1.319239e-01	ci left: 9.807208e-04	ci right 1.120376e-03	k: 881	n:840000
KIF25   840000 perm   446 sec   (1885 perm/sec)   p_kst 1.048810e-03   p_cons 5.785702e-01   p_joint 8.285714e-04

Joint ci ratio: 1.473654e-01	ci left: 7.704651e-04	ci right 8.941539e-04	k: 706	n:850000
Cons ci ratio: 3.629179e-03	ci left: 5.774659e-01	ci right 5.795665e-01	k: 491739	n:850000
KS ci ratio: 1.311823e-01	ci left: 9.805605e-04	ci right 1.119346e-03	k: 891	n:850000
KIF25   850000 perm   454 sec   (1871 perm/sec)   p_kst 1.048235e-03   p_cons 5.785165e-01   p_joint 8.305882e-04

Joint ci ratio: 1.325285e-01	ci left: 9.489177e-04	ci right 1.084712e-03	k: 873	n:860000
Cons ci ratio: 3.608286e-03	ci left: 5.774357e-01	ci right 5.795242e-01	k: 497493	n:860000
KS ci ratio: 1.304532e-01	ci left: 9.804060e-04	ci right 1.118339e-03	k: 901	n:860000
KIF25   860000 perm   463 sec   (1856 perm/sec)   p_kst 1.047674e-03   p_cons 5.784802e-01   p_joint 1.015116e-03

Joint ci ratio: 1.363294e-01	ci left: 8.846913e-04	ci right 1.015220e-03	k: 825	n:870000
Cons ci ratio: 3.587157e-03	ci left: 5.774868e-01	ci right 5.795632e-01	k: 503317	n:870000
KS ci ratio: 1.298073e-01	ci left: 9.791449e-04	ci right 1.116166e-03	k: 910	n:870000
KIF25   870000 perm   472 sec   (1842 perm/sec)   p_kst 1.045977e-03   p_cons 5.785253e-01   p_joint 9.482759e-04

Joint ci ratio: 1.351077e-01	ci left: 8.911049e-04	ci right 1.021307e-03	k: 840	n:880000
Cons ci ratio: 3.566529e-03	ci left: 5.775186e-01	ci right 5.795831e-01	k: 509125	n:880000
KS ci ratio: 1.292413e-01	ci left: 9.768146e-04	ci right 1.112868e-03	k: 918	n:880000
KIF25   880000 perm   481 sec   (1828 perm/sec)   p_kst 1.043182e-03   p_cons 5.785511e-01   p_joint 9.545455e-04

Joint ci ratio: 1.295954e-01	ci left: 9.604025e-04	ci right 1.094564e-03	k: 913	n:890000
Cons ci ratio: 3.546072e-03	ci left: 5.775744e-01	ci right 5.796273e-01	k: 514955	n:890000
KS ci ratio: 1.282677e-01	ci left: 9.810629e-04	ci right 1.116600e-03	k: 932	n:890000
KIF25   890000 perm   491 sec   (1814 perm/sec)   p_kst 1.047191e-03   p_cons 5.786011e-01   p_joint 1.025843e-03

Joint ci ratio: 1.287528e-01	ci left: 9.626339e-04	ci right 1.096167e-03	k: 925	n:900000
Cons ci ratio: 3.526284e-03	ci left: 5.775846e-01	ci right 5.796260e-01	k: 520745	n:900000
KS ci ratio: 1.274506e-01	ci left: 9.830692e-04	ci right 1.117953e-03	k: 944	n:900000
KIF25   900000 perm   500 sec   (1801 perm/sec)   p_kst 1.048889e-03   p_cons 5.786056e-01   p_joint 1.027778e-03

Joint ci ratio: 1.278583e-01	ci left: 9.658828e-04	ci right 1.098865e-03	k: 938	n:910000
Cons ci ratio: 3.506501e-03	ci left: 5.776396e-01	ci right 5.796698e-01	k: 526576	n:910000
KS ci ratio: 1.267152e-01	ci left: 9.839699e-04	ci right 1.118140e-03	k: 955	n:910000
KIF25   910000 perm   509 sec   (1787 perm/sec)   p_kst 1.049451e-03   p_cons 5.786549e-01   p_joint 1.030769e-03

Joint ci ratio: 1.243929e-01	ci left: 1.011177e-03	ci right 1.146344e-03	k: 991	n:920000
Cons ci ratio: 3.487139e-03	ci left: 5.776805e-01	ci right 5.796995e-01	k: 532395	n:920000
KS ci ratio: 1.257323e-01	ci left: 9.890642e-04	ci right 1.122805e-03	k: 970	n:920000
KIF25   920000 perm   519 sec   (1774 perm/sec)   p_kst 1.054348e-03   p_cons 5.786902e-01   p_joint 1.077174e-03

Joint ci ratio: 1.238946e-01	ci left: 1.008639e-03	ci right 1.142887e-03	k: 999	n:930000
Cons ci ratio: 3.468003e-03	ci left: 5.777333e-01	ci right 5.797414e-01	k: 538226	n:930000
KS ci ratio: 1.252177e-01	ci left: 9.867612e-04	ci right 1.119604e-03	k: 978	n:930000
KIF25   930000 perm   528 sec   (1761 perm/sec)   p_kst 1.051613e-03   p_cons 5.787376e-01   p_joint 1.074194e-03

Joint ci ratio: 1.232797e-01	ci left: 1.008218e-03	ci right 1.141695e-03	k: 1009	n:940000
Cons ci ratio: 3.449405e-03	ci left: 5.777532e-01	ci right 5.797506e-01	k: 544027	n:940000
KS ci ratio: 1.243944e-01	ci left: 9.896619e-04	ci right 1.121954e-03	k: 991	n:940000
KIF25   940000 perm   538 sec   (1748 perm/sec)   p_kst 1.054255e-03   p_cons 5.787521e-01   p_joint 1.073404e-03

Joint ci ratio: 1.224339e-01	ci left: 1.011889e-03	ci right 1.144867e-03	k: 1023	n:950000
Cons ci ratio: 3.431184e-03	ci left: 5.777611e-01	ci right 5.797479e-01	k: 549817	n:950000
KS ci ratio: 1.235871e-01	ci left: 9.925042e-04	ci right 1.124253e-03	k: 1004	n:950000
KIF25   950000 perm   547 sec   (1735 perm/sec)   p_kst 1.056842e-03   p_cons 5.787547e-01   p_joint 1.076842e-03

Joint ci ratio: 1.219586e-01	ci left: 1.009427e-03	ci right 1.141529e-03	k: 1031	n:960000
Cons ci ratio: 3.413226e-03	ci left: 5.777720e-01	ci right 5.797484e-01	k: 555610	n:960000
KS ci ratio: 1.230375e-01	ci left: 9.912514e-04	ci right 1.122206e-03	k: 1013	n:960000
KIF25   960000 perm   557 sec   (1723 perm/sec)   p_kst 1.055208e-03   p_cons 5.787604e-01   p_joint 1.073958e-03

Joint ci ratio: 1.214304e-01	ci left: 1.008017e-03	ci right 1.139322e-03	k: 1040	n:970000
Cons ci ratio: 3.395369e-03	ci left: 5.778084e-01	ci right 5.797746e-01	k: 561428	n:970000
KS ci ratio: 1.222561e-01	ci left: 9.940233e-04	ci right 1.124449e-03	k: 1026	n:970000
KIF25   970000 perm   567 sec   (1710 perm/sec)   p_kst 1.057732e-03   p_cons 5.787918e-01   p_joint 1.072165e-03

Joint ci ratio: 1.211982e-01	ci left: 1.001689e-03	ci right 1.131902e-03	k: 1044	n:980000
Cons ci ratio: 3.377322e-03	ci left: 5.779115e-01	ci right 5.798676e-01	k: 567312	n:980000
KS ci ratio: 1.219008e-01	ci left: 9.898156e-04	ci right 1.119285e-03	k: 1032	n:980000
KIF25   980000 perm   577 sec   (1698 perm/sec)   p_kst 1.053061e-03   p_cons 5.788898e-01   p_joint 1.065306e-03

Joint ci ratio: 1.207371e-01	ci left: 9.994067e-04	ci right 1.128793e-03	k: 1052	n:990000
Cons ci ratio: 3.360242e-03	ci left: 5.779136e-01	ci right 5.798597e-01	k: 573098	n:990000
KS ci ratio: 1.215486e-01	ci left: 9.856934e-04	ci right 1.114224e-03	k: 1038	n:990000
KIF25   990000 perm   587 sec   (1686 perm/sec)   p_kst 1.048485e-03   p_cons 5.788869e-01   p_joint 1.062626e-03

Joint ci ratio: 1.224372e-01	ci left: 9.612934e-04	ci right 1.087625e-03	k: 1023	n:1000000
Cons ci ratio: 3.342945e-03	ci left: 5.779846e-01	ci right 5.799210e-01	k: 578953	n:1000000
KS ci ratio: 1.209679e-01	ci left: 9.855331e-04	ci right 1.113385e-03	k: 1048	n:1000000
KIF25   1000000 perm   597 sec   (1674 perm/sec)   p_kst 1.048000e-03   p_cons 5.789530e-01   p_joint 1.023000e-03

Joint ci ratio: 1.219027e-01	ci left: 9.604142e-04	ci right 1.086040e-03	k: 1032	n:1010000
Cons ci ratio: 3.326459e-03	ci left: 5.779740e-01	ci right 5.799008e-01	k: 584727	n:1010000
KS ci ratio: 1.205094e-01	ci left: 9.834569e-04	ci right 1.110522e-03	k: 1056	n:1010000
KIF25   1010000 perm   607 sec   (1663 perm/sec)   p_kst 1.045545e-03   p_cons 5.789376e-01   p_joint 1.021782e-03

Joint ci ratio: 1.191082e-01	ci left: 9.975909e-04	ci right 1.124878e-03	k: 1081	n:1020000
Cons ci ratio: 3.310322e-03	ci left: 5.779480e-01	ci right 5.798653e-01	k: 590485	n:1020000
KS ci ratio: 1.198310e-01	ci left: 9.852263e-04	ci right 1.111752e-03	k: 1068	n:1020000
KIF25   1020000 perm   618 sec   (1651 perm/sec)   p_kst 1.047059e-03   p_cons 5.789069e-01   p_joint 1.059804e-03

Joint ci ratio: 1.185073e-01	ci left: 9.982678e-04	ci right 1.124953e-03	k: 1092	n:1030000
Cons ci ratio: 3.293912e-03	ci left: 5.779973e-01	ci right 5.799052e-01	k: 596320	n:1030000
KS ci ratio: 1.191640e-01	ci left: 9.869633e-04	ci right 1.112957e-03	k: 1080	n:1030000
KIF25   1030000 perm   628 sec   (1640 perm/sec)   p_kst 1.048544e-03   p_cons 5.789515e-01   p_joint 1.060194e-03

Joint ci ratio: 1.180225e-01	ci left: 9.970669e-04	ci right 1.123046e-03	k: 1101	n:1040000
Cons ci ratio: 3.277815e-03	ci left: 5.780350e-01	ci right 5.799338e-01	k: 602144	n:1040000
KS ci ratio: 1.185079e-01	ci left: 9.886688e-04	ci right 1.114137e-03	k: 1092	n:1040000
KIF25   1040000 perm   639 sec   (1629 perm/sec)   p_kst 1.050000e-03   p_cons 5.789846e-01   p_joint 1.058654e-03

Joint ci ratio: 1.173850e-01	ci left: 9.986631e-04	ci right 1.124115e-03	k: 1113	n:1050000
Cons ci ratio: 3.261588e-03	ci left: 5.781264e-01	ci right 5.800160e-01	k: 608025	n:1050000
KS ci ratio: 1.180231e-01	ci left: 9.875707e-04	ci right 1.112351e-03	k: 1101	n:1050000
KIF25   1050000 perm   649 sec   (1618 perm/sec)   p_kst 1.048571e-03   p_cons 5.790714e-01   p_joint 1.060000e-03

Joint ci ratio: 1.170705e-01	ci left: 9.947361e-04	ci right 1.119337e-03	k: 1119	n:1060000
Cons ci ratio: 3.246674e-03	ci left: 5.780547e-01	ci right 5.799354e-01	k: 613735	n:1060000
KS ci ratio: 1.173856e-01	ci left: 9.892415e-04	ci right 1.113511e-03	k: 1113	n:1060000
KIF25   1060000 perm   660 sec   (1607 perm/sec)   p_kst 1.050000e-03   p_cons 5.789953e-01   p_joint 1.055660e-03

Joint ci ratio: 1.166030e-01	ci left: 9.936048e-04	ci right 1.117533e-03	k: 1128	n:1070000
Cons ci ratio: 3.231361e-03	ci left: 5.780751e-01	ci right 5.799469e-01	k: 619542	n:1070000
KS ci ratio: 1.169665e-01	ci left: 9.872537e-04	ci right 1.110800e-03	k: 1121	n:1070000
KIF25   1070000 perm   670 sec   (1596 perm/sec)   p_kst 1.047664e-03   p_cons 5.790112e-01   p_joint 1.054206e-03

Joint ci ratio: 1.162434e-01	ci left: 9.906974e-04	ci right 1.113855e-03	k: 1135	n:1080000
Cons ci ratio: 3.216599e-03	ci left: 5.780441e-01	ci right 5.799073e-01	k: 625294	n:1080000
KS ci ratio: 1.165003e-01	ci left: 9.862024e-04	ci right 1.109091e-03	k: 1130	n:1080000
KIF25   1080000 perm   681 sec   (1585 perm/sec)   p_kst 1.046296e-03   p_cons 5.789759e-01   p_joint 1.050926e-03

Joint ci ratio: 1.155334e-01	ci left: 9.940803e-04	ci right 1.116853e-03	k: 1149	n:1090000
Cons ci ratio: 3.201839e-03	ci left: 5.780440e-01	ci right 5.798987e-01	k: 631079	n:1090000
KS ci ratio: 1.157351e-01	ci left: 9.905166e-04	ci right 1.113077e-03	k: 1145	n:1090000
KIF25   1090000 perm   692 sec   (1575 perm/sec)   p_kst 1.050459e-03   p_cons 5.789716e-01   p_joint 1.054128e-03

Joint ci ratio: 1.150841e-01	ci left: 9.929890e-04	ci right 1.115117e-03	k: 1158	n:1100000
Cons ci ratio: 3.187470e-03	ci left: 5.780149e-01	ci right 5.798611e-01	k: 636832	n:1100000
KS ci ratio: 1.151836e-01	ci left: 9.912231e-04	ci right 1.113247e-03	k: 1156	n:1100000
KIF25   1100000 perm   703 sec   (1565 perm/sec)   p_kst 1.050909e-03   p_cons 5.789382e-01   p_joint 1.052727e-03

Joint ci ratio: 1.145908e-01	ci left: 9.927934e-04	ci right 1.114339e-03	k: 1168	n:1110000
Cons ci ratio: 3.173123e-03	ci left: 5.780124e-01	ci right 5.798503e-01	k: 642614	n:1110000
KS ci ratio: 1.148369e-01	ci left: 9.884180e-04	ci right 1.109705e-03	k: 1163	n:1110000
KIF25   1110000 perm   714 sec   (1554 perm/sec)   p_kst 1.047748e-03   p_cons 5.789315e-01   p_joint 1.052252e-03

Joint ci ratio: 1.160412e-01	ci left: 9.587821e-04	ci right 1.077751e-03	k: 1139	n:1120000
Cons ci ratio: 3.159355e-03	ci left: 5.779501e-01	ci right 5.797798e-01	k: 648329	n:1120000
KS ci ratio: 1.140554e-01	ci left: 9.934698e-04	ci right 1.114491e-03	k: 1179	n:1120000
KIF25   1120000 perm   726 sec   (1544 perm/sec)   p_kst 1.052679e-03   p_cons 5.788652e-01   p_joint 1.016964e-03

Joint ci ratio: 1.153350e-01	ci left: 9.623283e-04	ci right 1.080961e-03	k: 1153	n:1130000
Cons ci ratio: 3.145731e-03	ci left: 5.778943e-01	ci right 5.797159e-01	k: 654050	n:1130000
KS ci ratio: 1.132897e-01	ci left: 9.984348e-04	ci right 1.119190e-03	k: 1195	n:1130000
KIF25   1130000 perm   737 sec   (1534 perm/sec)   p_kst 1.057522e-03   p_cons 5.788053e-01   p_joint 1.020354e-03

Joint ci ratio: 1.148879e-01	ci left: 9.615542e-04	ci right 1.079601e-03	k: 1162	n:1140000
Cons ci ratio: 3.132191e-03	ci left: 5.778535e-01	ci right 5.796671e-01	k: 659787	n:1140000
KS ci ratio: 1.128659e-01	ci left: 9.973481e-04	ci right 1.117491e-03	k: 1204	n:1140000
KIF25   1140000 perm   748 sec   (1524 perm/sec)   p_kst 1.056140e-03   p_cons 5.787605e-01   p_joint 1.019298e-03

Joint ci ratio: 1.141539e-01	ci left: 9.658629e-04	ci right 1.083630e-03	k: 1177	n:1150000
Cons ci ratio: 3.118513e-03	ci left: 5.778622e-01	ci right 5.796679e-01	k: 665580	n:1150000
KS ci ratio: 1.122157e-01	ci left: 1.000507e-03	ci right 1.120290e-03	k: 1218	n:1150000
KIF25   1150000 perm   759 sec   (1515 perm/sec)   p_kst 1.059130e-03   p_cons 5.787652e-01   p_joint 1.023478e-03

Joint ci ratio: 1.136246e-01	ci left: 9.667491e-04	ci right 1.084041e-03	k: 1188	n:1160000
Cons ci ratio: 3.105019e-03	ci left: 5.778698e-01	ci right 5.796677e-01	k: 671372	n:1160000
KS ci ratio: 1.117128e-01	ci left: 1.001099e-03	ci right 1.120380e-03	k: 1229	n:1160000
KIF25   1160000 perm   771 sec   (1505 perm/sec)   p_kst 1.059483e-03   p_cons 5.787690e-01   p_joint 1.024138e-03

Joint ci ratio: 1.133867e-01	ci left: 9.626384e-04	ci right 1.079171e-03	k: 1193	n:1170000
Cons ci ratio: 3.091464e-03	ci left: 5.779141e-01	ci right 5.797043e-01	k: 677207	n:1170000
KS ci ratio: 1.113964e-01	ci left: 9.983584e-04	ci right 1.116954e-03	k: 1236	n:1170000
KIF25   1170000 perm   782 sec   (1496 perm/sec)   p_kst 1.056410e-03   p_cons 5.788094e-01   p_joint 1.019658e-03

Joint ci ratio: 1.130088e-01	ci left: 9.610681e-04	ci right 1.076997e-03	k: 1201	n:1180000
Cons ci ratio: 3.077920e-03	ci left: 5.779840e-01	ci right 5.797665e-01	k: 683073	n:1180000
KS ci ratio: 1.110381e-01	ci left: 9.964888e-04	ci right 1.114457e-03	k: 1244	n:1180000
KIF25   1180000 perm   794 sec   (1487 perm/sec)   p_kst 1.054237e-03   p_cons 5.788754e-01   p_joint 1.017797e-03

Joint ci ratio: 1.124488e-01	ci left: 9.627916e-04	ci right 1.078315e-03	k: 1213	n:1190000
Cons ci ratio: 3.064759e-03	ci left: 5.780199e-01	ci right 5.797949e-01	k: 688900	n:1190000
KS ci ratio: 1.105508e-01	ci left: 9.971025e-04	ci right 1.114591e-03	k: 1255	n:1190000
KIF25   1190000 perm   806 sec   (1477 perm/sec)   p_kst 1.054622e-03   p_cons 5.789076e-01   p_joint 1.019328e-03

Joint ci ratio: 1.118514e-01	ci left: 9.652979e-04	ci right 1.080466e-03	k: 1226	n:1200000
Cons ci ratio: 3.051754e-03	ci left: 5.780568e-01	ci right 5.798244e-01	k: 694729	n:1200000
KS ci ratio: 1.102005e-01	ci left: 9.952759e-04	ci right 1.112154e-03	k: 1263	n:1200000
KIF25   1200000 perm   817 sec   (1468 perm/sec)   p_kst 1.052500e-03   p_cons 5.789408e-01   p_joint 1.021667e-03

Joint ci ratio: 1.115339e-01	ci left: 9.629437e-04	ci right 1.077483e-03	k: 1233	n:1210000
Cons ci ratio: 3.039099e-03	ci left: 5.780635e-01	ci right 5.798237e-01	k: 700522	n:1210000
KS ci ratio: 1.098103e-01	ci left: 9.942838e-04	ci right 1.110605e-03	k: 1272	n:1210000
KIF25   1210000 perm   829 sec   (1459 perm/sec)   p_kst 1.051240e-03   p_cons 5.789438e-01   p_joint 1.019008e-03

Joint ci ratio: 1.110400e-01	ci left: 9.638161e-04	ci right 1.077918e-03	k: 1244	n:1220000
Cons ci ratio: 3.026879e-03	ci left: 5.780249e-01	ci right 5.797780e-01	k: 706260	n:1220000
KS ci ratio: 1.094242e-01	ci left: 9.933087e-04	ci right 1.109081e-03	k: 1281	n:1220000
KIF25   1220000 perm   841 sec   (1450 perm/sec)   p_kst 1.050000e-03   p_cons 5.789016e-01   p_joint 1.019672e-03

Joint ci ratio: 1.104207e-01	ci left: 9.670472e-04	ci right 1.080852e-03	k: 1258	n:1230000
Cons ci ratio: 3.014093e-03	ci left: 5.781025e-01	ci right 5.798484e-01	k: 712140	n:1230000
KS ci ratio: 1.086637e-01	ci left: 9.994682e-04	ci right 1.115097e-03	k: 1299	n:1230000
KIF25   1230000 perm   853 sec   (1441 perm/sec)   p_kst 1.056098e-03   p_cons 5.789756e-01   p_joint 1.022764e-03

Joint ci ratio: 1.100717e-01	ci left: 9.655221e-04	ci right 1.078765e-03	k: 1266	n:1240000
Cons ci ratio: 3.001764e-03	ci left: 5.781304e-01	ci right 5.798692e-01	k: 717960	n:1240000
KS ci ratio: 1.082896e-01	ci left: 9.984691e-04	ci right 1.113559e-03	k: 1308	n:1240000
KIF25   1240000 perm   865 sec   (1433 perm/sec)   p_kst 1.054839e-03   p_cons 5.790000e-01   p_joint 1.020968e-03

Joint ci ratio: 1.096399e-01	ci left: 9.655781e-04	ci right 1.078354e-03	k: 1276	n:1250000
Cons ci ratio: 2.990140e-03	ci left: 5.780675e-01	ci right 5.797993e-01	k: 723667	n:1250000
KS ci ratio: 1.078783e-01	ci left: 9.982651e-04	ci right 1.112867e-03	k: 1318	n:1250000
KIF25   1250000 perm   878 sec   (1424 perm/sec)   p_kst 1.054400e-03   p_cons 5.789336e-01   p_joint 1.020800e-03

Joint ci ratio: 1.092981e-01	ci left: 9.640901e-04	ci right 1.076319e-03	k: 1284	n:1260000
Cons ci ratio: 2.978592e-03	ci left: 5.780151e-01	ci right 5.797401e-01	k: 729386	n:1260000
KS ci ratio: 1.074717e-01	ci left: 9.980651e-04	ci right 1.112185e-03	k: 1328	n:1260000
KIF25   1260000 perm   890 sec   (1416 perm/sec)   p_kst 1.053968e-03   p_cons 5.788778e-01   p_joint 1.019048e-03

Joint ci ratio: 1.088753e-01	ci left: 9.641580e-04	ci right 1.075933e-03	k: 1294	n:1270000
Cons ci ratio: 2.966832e-03	ci left: 5.780203e-01	ci right 5.797384e-01	k: 735177	n:1270000
KS ci ratio: 1.071097e-01	ci left: 9.971027e-04	ci right 1.110704e-03	k: 1337	n:1270000
KIF25   1270000 perm   902 sec   (1408 perm/sec)   p_kst 1.052756e-03   p_cons 5.788795e-01   p_joint 1.018898e-03

Joint ci ratio: 1.084158e-01	ci left: 9.649858e-04	ci right 1.076354e-03	k: 1305	n:1280000
Cons ci ratio: 2.955200e-03	ci left: 5.780269e-01	ci right 5.797384e-01	k: 740970	n:1280000
KS ci ratio: 1.065142e-01	ci left: 1.000719e-03	ci right 1.114058e-03	k: 1352	n:1280000
KIF25   1280000 perm   914 sec   (1400 perm/sec)   p_kst 1.056250e-03   p_cons 5.788828e-01   p_joint 1.019531e-03

Joint ci ratio: 1.079211e-01	ci left: 9.665560e-04	ci right 1.077564e-03	k: 1317	n:1290000
Cons ci ratio: 2.943615e-03	ci left: 5.780482e-01	ci right 5.797530e-01	k: 746782	n:1290000
KS ci ratio: 1.059672e-01	ci left: 1.003526e-03	ci right 1.116563e-03	k: 1366	n:1290000
KIF25   1290000 perm   927 sec   (1392 perm/sec)   p_kst 1.058915e-03   p_cons 5.789008e-01   p_joint 1.020930e-03

Joint ci ratio: 1.072717e-01	ci left: 9.710975e-04	ci right 1.081914e-03	k: 1333	n:1300000
Cons ci ratio: 2.932406e-03	ci left: 5.780292e-01	ci right 5.797274e-01	k: 752542	n:1300000
KS ci ratio: 1.054286e-01	ci left: 1.006291e-03	ci right 1.119028e-03	k: 1380	n:1300000
KIF25   1300000 perm   939 sec   (1384 perm/sec)   p_kst 1.061538e-03   p_cons 5.788785e-01   p_joint 1.025385e-03

Joint ci ratio: 1.067130e-01	ci left: 9.740857e-04	ci right 1.084628e-03	k: 1347	n:1310000
Cons ci ratio: 2.921287e-03	ci left: 5.780165e-01	ci right 5.797083e-01	k: 758310	n:1310000
KS ci ratio: 1.049357e-01	ci left: 1.008272e-03	ci right 1.120670e-03	k: 1393	n:1310000
KIF25   1310000 perm   952 sec   (1376 perm/sec)   p_kst 1.063359e-03   p_cons 5.788626e-01   p_joint 1.028244e-03

Joint ci ratio: 1.044126e-01	ci left: 1.010962e-03	ci right 1.123064e-03	k: 1407	n:1320000
Cons ci ratio: 2.910298e-03	ci left: 5.780034e-01	ci right 5.796887e-01	k: 764077	n:1320000
KS ci ratio: 1.047108e-01	ci left: 1.005060e-03	ci right 1.116845e-03	k: 1399	n:1320000
KIF25   1320000 perm   965 sec   (1368 perm/sec)   p_kst 1.059848e-03   p_cons 5.788462e-01   p_joint 1.065909e-03

Joint ci ratio: 1.040071e-01	ci left: 1.011416e-03	ci right 1.123106e-03	k: 1418	n:1330000
Cons ci ratio: 2.899473e-03	ci left: 5.779836e-01	ci right 5.796626e-01	k: 769835	n:1330000
KS ci ratio: 1.041910e-01	ci left: 1.007754e-03	ci right 1.119249e-03	k: 1413	n:1330000
KIF25   1330000 perm   978 sec   (1360 perm/sec)   p_kst 1.062406e-03   p_cons 5.788233e-01   p_joint 1.066165e-03

Joint ci ratio: 1.036789e-01	ci left: 1.010410e-03	ci right 1.121616e-03	k: 1427	n:1340000
Cons ci ratio: 2.888714e-03	ci left: 5.779732e-01	ci right 5.796459e-01	k: 775605	n:1340000
KS ci ratio: 1.037152e-01	ci left: 1.009683e-03	ci right 1.120850e-03	k: 1426	n:1340000
KIF25   1340000 perm   991 sec   (1353 perm/sec)   p_kst 1.064179e-03   p_cons 5.788097e-01   p_joint 1.064925e-03

Joint ci ratio: 1.033178e-01	ci left: 1.010141e-03	ci right 1.120906e-03	k: 1437	n:1350000
Cons ci ratio: 2.878088e-03	ci left: 5.779606e-01	ci right 5.796272e-01	k: 781372	n:1350000
KS ci ratio: 1.033538e-01	ci left: 1.009419e-03	ci right 1.120146e-03	k: 1436	n:1350000
KIF25   1350000 perm   1003 sec   (1345 perm/sec)   p_kst 1.063704e-03   p_cons 5.787941e-01   p_joint 1.064444e-03

Joint ci ratio: 1.028893e-01	ci left: 1.011309e-03	ci right 1.121715e-03	k: 1449	n:1360000
Cons ci ratio: 2.867275e-03	ci left: 5.779998e-01	ci right 5.796602e-01	k: 787209	n:1360000
KS ci ratio: 1.029248e-01	ci left: 1.010593e-03	ci right 1.120961e-03	k: 1448	n:1360000
KIF25   1360000 perm   1016 sec   (1338 perm/sec)   p_kst 1.064706e-03   p_cons 5.788301e-01   p_joint 1.065441e-03

Joint ci ratio: 1.024311e-01	ci left: 1.013173e-03	ci right 1.123260e-03	k: 1462	n:1370000
Cons ci ratio: 2.856651e-03	ci left: 5.780267e-01	ci right 5.796810e-01	k: 793030	n:1370000
KS ci ratio: 1.023611e-01	ci left: 1.014596e-03	ci right 1.124757e-03	k: 1464	n:1370000
KIF25   1370000 perm   1030 sec   (1331 perm/sec)   p_kst 1.068613e-03   p_cons 5.788540e-01   p_joint 1.067153e-03

Joint ci ratio: 1.018409e-01	ci left: 1.017836e-03	ci right 1.127754e-03	k: 1479	n:1380000
Cons ci ratio: 2.846221e-03	ci left: 5.780402e-01	ci right 5.796885e-01	k: 798833	n:1380000
KS ci ratio: 1.018064e-01	ci left: 1.018542e-03	ci right 1.128497e-03	k: 1480	n:1380000
KIF25   1380000 perm   1043 sec   (1323 perm/sec)   p_kst 1.072464e-03   p_cons 5.788645e-01   p_joint 1.071739e-03

Joint ci ratio: 1.014304e-01	ci left: 1.018927e-03	ci right 1.128493e-03	k: 1491	n:1390000
Cons ci ratio: 2.836285e-03	ci left: 5.779880e-01	ci right 5.796304e-01	k: 804545	n:1390000
KS ci ratio: 1.014304e-01	ci left: 1.018927e-03	ci right 1.128493e-03	k: 1491	n:1390000
KIF25   1390000 perm   1056 sec   (1316 perm/sec)   p_kst 1.072662e-03   p_cons 5.788094e-01   p_joint 1.072662e-03

Joint ci ratio: 1.010586e-01	ci left: 1.019307e-03	ci right 1.128488e-03	k: 1502	n:1400000
Cons ci ratio: 2.826055e-03	ci left: 5.780052e-01	ci right 5.796416e-01	k: 810353	n:1400000
KS ci ratio: 1.009578e-01	ci left: 1.021396e-03	ci right 1.130685e-03	k: 1505	n:1400000
KIF25   1400000 perm   1069 sec   (1309 perm/sec)   p_kst 1.075000e-03   p_cons 5.788236e-01   p_joint 1.072857e-03

Joint ci ratio: 1.007241e-01	ci left: 1.018991e-03	ci right 1.127756e-03	k: 1512	n:1410000
Cons ci ratio: 2.815869e-03	ci left: 5.780335e-01	ci right 5.796641e-01	k: 816177	n:1410000
KS ci ratio: 1.006243e-01	ci left: 1.021065e-03	ci right 1.129937e-03	k: 1515	n:1410000
KIF25   1410000 perm   1083 sec   (1302 perm/sec)   p_kst 1.074468e-03   p_cons 5.788489e-01   p_joint 1.072340e-03

Joint ci ratio: 1.004589e-01	ci left: 1.017307e-03	ci right 1.125590e-03	k: 1520	n:1420000
Cons ci ratio: 2.806324e-03	ci left: 5.779691e-01	ci right 5.795940e-01	k: 821870	n:1420000
KS ci ratio: 1.002283e-01	ci left: 1.022113e-03	ci right 1.130643e-03	k: 1527	n:1420000
KIF25   1420000 perm   1096 sec   (1295 perm/sec)   p_kst 1.075352e-03   p_cons 5.787817e-01   p_joint 1.070423e-03

Joint ci ratio: 1.002287e-01	ci left: 1.014965e-03	ci right 1.122736e-03	k: 1527	n:1430000
Cons ci ratio: 2.796469e-03	ci left: 5.779762e-01	ci right 5.795955e-01	k: 827664	n:1430000
KS ci ratio: 9.986948e-02	ci left: 1.022465e-03	ci right 1.130621e-03	k: 1538	n:1430000
KIF25   1430000 perm   1110 sec   (1288 perm/sec)   p_kst 1.075524e-03   p_cons 5.787860e-01   p_joint 1.067832e-03

Joint ci ratio: 9.269914e-02	ci left: 1.182772e-03	ci right 1.298415e-03	k: 1785	n:1440000
Cons ci ratio: 2.786813e-03	ci left: 5.779667e-01	ci right 5.795803e-01	k: 833434	n:1440000
KS ci ratio: 9.948234e-02	ci left: 1.023490e-03	ci right 1.131310e-03	k: 1550	n:1440000
KIF25   1440000 perm   1124 sec   (1281 perm/sec)   p_kst 1.076389e-03   p_cons 5.787736e-01   p_joint 1.239583e-03

Outputting figure to mutsig2_images.part000000000091/KIF25.2_1187_1440000_0.0010764_0.57877_0.0012396.png
                gene_name: KIF25
               theta_stop: 0.099 
                    nperm: 1440000 
                     p_ks: 0.0011 
        ci_ks_bounds_left: 0.0010 
       ci_ks_bounds_right: 0.0011 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.58 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.0012 
     ci_joint_bounds_left: 0.0012 
    ci_joint_bounds_right: 0.0013 

Current progress: 67 percent done.
KIF2C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.972249e-01	ci left: 3.424249e-02	ci right 4.182967e-02	k: 379	n:10000
Cons ci ratio: 1.766676e-02	ci left: 8.237123e-01	ci right 8.384943e-01	k: 8312	n:10000
KS ci ratio: 4.023926e-01	ci left: 7.512676e-03	ci right 1.138119e-02	k: 93	n:10000
KIF2C   10000 perm   2 sec   (5893 perm/sec)   p_kst 9.300000e-03   p_cons 8.312000e-01   p_joint 3.790000e-02

Joint ci ratio: 6.549509e-02	ci left: 1.469022e-01	ci right 1.568992e-01	k: 3037	n:20000
Cons ci ratio: 1.266272e-02	ci left: 8.220396e-01	ci right 8.325651e-01	k: 16547	n:20000
KS ci ratio: 2.786178e-01	ci left: 8.434855e-03	ci right 1.121045e-02	k: 195	n:20000
KIF2C   20000 perm   4 sec   (5212 perm/sec)   p_kst 9.750000e-03   p_cons 8.273500e-01   p_joint 1.518500e-01

Joint ci ratio: 9.563391e-02	ci left: 5.049159e-02	ci right 5.559541e-02	k: 1590	n:30000
Cons ci ratio: 1.031661e-02	ci left: 8.236476e-01	ci right 8.322221e-01	k: 24839	n:30000
KS ci ratio: 2.244287e-01	ci left: 8.936542e-03	ci right 1.122650e-02	k: 301	n:30000
KIF2C   30000 perm   6 sec   (4974 perm/sec)   p_kst 1.003333e-02   p_cons 8.279667e-01   p_joint 5.300000e-02

Joint ci ratio: 8.627683e-02	ci left: 4.695381e-02	ci right 5.121196e-02	k: 1962	n:40000
Cons ci ratio: 8.946664e-03	ci left: 8.238369e-01	ci right 8.312655e-01	k: 33103	n:40000
KS ci ratio: 1.935541e-01	ci left: 9.167106e-03	ci right 1.115497e-02	k: 405	n:40000
KIF2C   40000 perm   8 sec   (4810 perm/sec)   p_kst 1.012500e-02   p_cons 8.275750e-01   p_joint 4.905000e-02

Joint ci ratio: 7.643028e-02	ci left: 4.806656e-02	ci right 5.190590e-02	k: 2498	n:50000
Cons ci ratio: 8.038390e-03	ci left: 8.229302e-01	ci right 8.295919e-01	k: 41314	n:50000
KS ci ratio: 1.740760e-01	ci left: 9.165546e-03	ci right 1.093203e-02	k: 501	n:50000
KIF2C   50000 perm   11 sec   (4672 perm/sec)   p_kst 1.002000e-02   p_cons 8.262800e-01   p_joint 4.996000e-02

Joint ci ratio: 8.061176e-02	ci left: 3.638613e-02	ci right 3.945878e-02	k: 2274	n:60000
Cons ci ratio: 7.337908e-03	ci left: 8.232277e-01	ci right 8.293073e-01	k: 49577	n:60000
KS ci ratio: 1.604498e-01	ci left: 9.059234e-03	ci right 1.065538e-02	k: 590	n:60000
KIF2C   60000 perm   13 sec   (4534 perm/sec)   p_kst 9.833333e-03   p_cons 8.262833e-01   p_joint 3.790000e-02

Joint ci ratio: 6.701606e-02	ci left: 4.503616e-02	ci right 4.817299e-02	k: 3261	n:70000
Cons ci ratio: 6.807707e-03	ci left: 8.228547e-01	ci right 8.284897e-01	k: 57798	n:70000
KS ci ratio: 1.508289e-01	ci left: 8.835896e-03	ci right 1.029091e-02	k: 668	n:70000
KIF2C   70000 perm   16 sec   (4435 perm/sec)   p_kst 9.542857e-03   p_cons 8.256857e-01   p_joint 4.658571e-02

Joint ci ratio: 6.190801e-02	ci left: 4.624560e-02	ci right 4.921231e-02	k: 3817	n:80000
Cons ci ratio: 6.361618e-03	ci left: 8.233297e-01	ci right 8.285966e-01	k: 66078	n:80000
KS ci ratio: 1.398529e-01	ci left: 9.044482e-03	ci right 1.041642e-02	k: 777	n:80000
KIF2C   80000 perm   18 sec   (4341 perm/sec)   p_kst 9.712500e-03   p_cons 8.259750e-01   p_joint 4.771250e-02

Joint ci ratio: 5.864942e-02	ci left: 4.590027e-02	ci right 4.868456e-02	k: 4255	n:90000
Cons ci ratio: 5.993322e-03	ci left: 8.236971e-01	ci right 8.286596e-01	k: 74357	n:90000
KS ci ratio: 1.331864e-01	ci left: 8.898033e-03	ci right 1.017832e-02	k: 857	n:90000
KIF2C   90000 perm   21 sec   (4246 perm/sec)   p_kst 9.522222e-03   p_cons 8.261889e-01   p_joint 4.727778e-02

Joint ci ratio: 5.521754e-02	ci left: 4.665361e-02	ci right 4.931269e-02	k: 4797	n:100000
Cons ci ratio: 5.681184e-03	ci left: 8.240581e-01	ci right 8.287630e-01	k: 82642	n:100000
KS ci ratio: 1.257759e-01	ci left: 9.014594e-03	ci right 1.023410e-02	k: 961	n:100000
KIF2C   100000 perm   24 sec   (4163 perm/sec)   p_kst 9.610000e-03   p_cons 8.264200e-01   p_joint 4.797000e-02

Joint ci ratio: 5.257363e-02	ci left: 4.684288e-02	ci right 4.938101e-02	k: 5291	n:110000
Cons ci ratio: 5.411849e-03	ci left: 8.244318e-01	ci right 8.289146e-01	k: 90935	n:110000
KS ci ratio: 1.195354e-01	ci left: 9.102755e-03	ci right 1.026877e-02	k: 1064	n:110000
KIF2C   110000 perm   27 sec   (4077 perm/sec)   p_kst 9.672727e-03   p_cons 8.266818e-01   p_joint 4.810000e-02

Joint ci ratio: 5.034501e-02	ci left: 4.687963e-02	ci right 4.930894e-02	k: 5770	n:120000
Cons ci ratio: 5.185940e-03	ci left: 8.242784e-01	ci right 8.285725e-01	k: 99172	n:120000
KS ci ratio: 1.141403e-01	ci left: 9.177467e-03	ci right 1.029642e-02	k: 1167	n:120000
KIF2C   120000 perm   30 sec   (3995 perm/sec)   p_kst 9.725000e-03   p_cons 8.264333e-01   p_joint 4.808333e-02

Joint ci ratio: 4.343123e-02	ci left: 5.768708e-02	ci right 6.025571e-02	k: 7665	n:130000
Cons ci ratio: 4.982666e-03	ci left: 8.243531e-01	ci right 8.284785e-01	k: 107435	n:130000
KS ci ratio: 1.093719e-01	ci left: 9.249169e-03	ci right 1.032671e-02	k: 1271	n:130000
KIF2C   130000 perm   33 sec   (3924 perm/sec)   p_kst 9.776923e-03   p_cons 8.264231e-01   p_joint 5.896154e-02

Joint ci ratio: 4.180484e-02	ci left: 5.785619e-02	ci right 6.033354e-02	k: 8272	n:140000
Cons ci ratio: 4.792475e-03	ci left: 8.249653e-01	ci right 8.289355e-01	k: 115774	n:140000
KS ci ratio: 1.049244e-01	ci left: 9.353202e-03	ci right 1.039582e-02	k: 1381	n:140000
KIF2C   140000 perm   36 sec   (3848 perm/sec)   p_kst 9.864286e-03   p_cons 8.269571e-01   p_joint 5.908571e-02

Joint ci ratio: 4.028821e-02	ci left: 5.816938e-02	ci right 6.056768e-02	k: 8904	n:150000
Cons ci ratio: 4.632834e-03	ci left: 8.248552e-01	ci right 8.286921e-01	k: 124017	n:150000
KS ci ratio: 1.012187e-01	ci left: 9.398633e-03	ci right 1.040711e-02	k: 1484	n:150000
KIF2C   150000 perm   40 sec   (3786 perm/sec)   p_kst 9.893333e-03   p_cons 8.267800e-01   p_joint 5.936000e-02

Joint ci ratio: 3.899945e-02	ci left: 5.823428e-02	ci right 6.055672e-02	k: 9502	n:160000
Cons ci ratio: 4.480415e-03	ci left: 8.252568e-01	ci right 8.289688e-01	k: 132339	n:160000
KS ci ratio: 9.850838e-02	ci left: 9.316992e-03	ci right 1.028839e-02	k: 1567	n:160000
KIF2C   160000 perm   43 sec   (3727 perm/sec)   p_kst 9.793750e-03   p_cons 8.271188e-01   p_joint 5.938750e-02

Outputting figure to mutsig2_images.part000000000091/KIF2C.2_2262_160000_0.0097938_0.82712_0.059388.png
                gene_name: KIF2C
               theta_stop: 0.099 
                    nperm: 160000 
                     p_ks: 0.0098 
        ci_ks_bounds_left: 0.0093 
       ci_ks_bounds_right: 0.010 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.83 
                  p_joint: 0.059 
     ci_joint_bounds_left: 0.058 
    ci_joint_bounds_right: 0.061 

Current progress: 78 percent done.
KIF4B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.466872e-02	ci left: 2.599312e-01	ci right 2.774037e-01	k: 2686	n:10000
Cons ci ratio: 1.001251e-01	ci left: 1.262063e-01	ci right 1.396083e-01	k: 1328	n:10000
KS ci ratio: 6.385595e-02	ci left: 2.648793e-01	ci right 2.824527e-01	k: 2736	n:10000
KIF4B   10000 perm   2 sec   (5139 perm/sec)   p_kst 2.736000e-01   p_cons 1.328000e-01   p_joint 2.686000e-01

Joint ci ratio: 6.120284e-02	ci left: 1.649655e-01	ci right 1.754306e-01	k: 3403	n:20000
Cons ci ratio: 7.054046e-02	ci left: 1.290118e-01	ci right 1.384949e-01	k: 2674	n:20000
KS ci ratio: 4.491033e-02	ci left: 2.696141e-01	ci right 2.820511e-01	k: 5516	n:20000
KIF4B   20000 perm   4 sec   (4660 perm/sec)   p_kst 2.758000e-01   p_cons 1.337000e-01   p_joint 1.701500e-01

Outputting figure to mutsig2_images.part000000000091/KIF4B.2_3709_20000_0.2758_0.1337_0.17015.png
                gene_name: KIF4B
               theta_stop: 0.071 
                    nperm: 20000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.27 
       ci_ks_bounds_right: 0.28 
                   p_cons: 0.13 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.14 
                  p_joint: 0.17 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.18 

Current progress: 89 percent done.
KIR3DL1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.651539e-03	ci left: 9.686815e-01	ci right 9.752397e-01	k: 9721	n:10000
KS ci ratio: 3.692423e-02	ci left: 5.199601e-01	ci right 5.396225e-01	k: 5298	n:10000
KIR3DL1   10000 perm   2 sec   (6659 perm/sec)   p_kst 5.298000e-01   p_cons 9.721000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000091/KIR3DL1.2_1371_10000_0.5298_0.9721_1.png
                gene_name: KIR3DL1
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.53 
        ci_ks_bounds_left: 0.52 
       ci_ks_bounds_right: 0.54 
                   p_cons: 0.97 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000091
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 91 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1648>
Subject: Job 8704248: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1648>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000092> was used as the working directory.
Started at Thu Nov 15 19:33:57 2012
Results reported at Thu Nov 15 19:35:43 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000092.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000092.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 92  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000092.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    131.35 sec.
    Max Memory :      4671 MB
    Max Swap   :      7476 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
92
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 92
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 92: processing genes 8233 - 8323
Calculating significance of each gene.
Using projection method.
8233	KIRREL	1
8234	KIRREL2	1
8235	KIRREL3	1
8236	KISS1	1
8237	KIT	1
8238	KITLG	1
8239	KL	1
8240	KLB	1
8241	KLC1	1
8242	KLC2	4.684478e-02
8243	KLC3	1
8244	KLC4	1
8245	KLF1	1
8246	KLF10	1
8247	KLF11	1
8248	KLF12	1
8249	KLF13	1
8250	KLF14	1
8251	KLF15	1
8252	KLF16	1
8253	KLF17	1
8254	KLF3	1
8255	KLF4	1
8256	KLF5	1
8257	KLF6	1.285678e-02
8258	KLF7	1
8259	KLF8	1
8260	KLF9	1
8261	KLHDC1	1
8262	KLHDC10	1
8263	KLHDC2	4.845593e-02
8264	KLHDC3	1
8265	KLHDC4	1
8266	KLHDC5	1
8267	KLHDC7A	3.099052e-01
8268	KLHDC7B	1
8269	KLHDC8A	1
8270	KLHDC8B	1
8271	KLHDC9	1
8272	KLHL1	1
8273	KLHL10	7.246690e-02
8274	KLHL11	1
8275	KLHL12	1
8276	KLHL13	1
In gene KLHL14 the following bins exceed PROBCAP:
    THCA-ET-A3DQ-TP	categ 5	N = 1919    n = 1	mu =   3.44e-08
8277	KLHL14	5.742185e-02
8278	KLHL15	1
8279	KLHL17	1
8280	KLHL18	1
8281	KLHL2	1
8282	KLHL20	1
8283	KLHL21	1
8284	KLHL22	1
8285	KLHL23	1
8286	KLHL24	8.046154e-02
8287	KLHL25	1
8288	KLHL26	1
8289	KLHL28	1
8290	KLHL3	1
8291	KLHL30	1
8292	KLHL31	1
8293	KLHL32	1
8294	KLHL34	1
8295	KLHL35	1.120424e-01
8296	KLHL36	1
8297	KLHL38	1
8298	KLHL4	1.822046e-01
8299	KLHL5	1
8300	KLHL6	1
8301	KLHL7	1
8302	KLHL8	1
8303	KLHL9	1
8304	KLK1	1
8305	KLK10	1
8306	KLK11	1
8307	KLK12	1
8308	KLK13	1
8309	KLK14	1
8310	KLK15	1
8311	KLK2	1
8312	KLK3	1
8313	KLK4	1
8314	KLK5	1
8315	KLK6	1
8316	KLK7	1
8317	KLK8	1
8318	KLK9	1
8319	KLKB1	1
8320	KLRAQ1	1
8321	KLRB1	1
8322	KLRC1	1
8323	KLRC2	1
Done

Running MutSig 2:
Scatter job 92: processing genes 8233 - 8323
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000092
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 92 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1556>
Subject: Job 8704249: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1556>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000093> was used as the working directory.
Started at Thu Nov 15 19:34:12 2012
Results reported at Thu Nov 15 19:37:56 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000093.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000093.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 93  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000093.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    312.92 sec.
    Max Memory :      5741 MB
    Max Swap   :      8522 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
93
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 93
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 93: processing genes 8324 - 8413
Calculating significance of each gene.
Using projection method.
8324	KLRC3	1
8325	KLRC4	1
8326	KLRD1	1
8327	KLRF1	1
8328	KLRG1	1
8329	KLRG2	1
8330	KLRK1	1
8331	KMO	1
8332	KNCN	1
8333	KNDC1	1
8334	KNG1	1
8335	KNTC1	1
8336	KPNA1	2.867856e-02
8337	KPNA2	1
8338	KPNA3	1
8339	KPNA4	1
8340	KPNA5	1
8341	KPNA6	1
8342	KPNB1	1
8343	KPRP	1
8344	KPTN	1
8345	KRAS	1.228649e-04
8346	KRBA1	1
8347	KRBA2	1.870214e-01
8348	KRCC1	1
8349	KREMEN1	1
8350	KREMEN2	1
8351	KRI1	1
8352	KRIT1	1
8353	KRR1	1.327953e-01
8354	KRT1	1
8355	KRT10	1
8356	KRT12	1
8357	KRT13	1
8358	KRT14	1
8359	KRT15	1
8360	KRT16	1
8361	KRT17	1
8362	KRT18	1.941619e-01
8363	KRT19	1
8364	KRT2	1
8365	KRT20	1
8366	KRT222	1
8367	KRT23	1
8368	KRT24	1
8369	KRT25	1
8370	KRT26	1
8371	KRT27	1
8372	KRT28	1
8373	KRT3	1
8374	KRT31	1
8375	KRT32	1.635672e-01
8376	KRT33A	1.538782e-01
8377	KRT33B	1
8378	KRT34	1
8379	KRT35	5.903706e-03
8380	KRT36	1
8381	KRT37	1
8382	KRT38	1
8383	KRT39	1
8384	KRT4	1
8385	KRT40	1
8386	KRT5	1
8387	KRT6A	1
8388	KRT6B	1
8389	KRT6C	1
8390	KRT7	1
8391	KRT71	1
8392	KRT72	1
8393	KRT73	1
8394	KRT74	1
8395	KRT75	1
8396	KRT76	1
8397	KRT77	1
8398	KRT78	1
8399	KRT79	1
8400	KRT8	1
8401	KRT80	1
8402	KRT81	1
8403	KRT82	1
8404	KRT83	1
8405	KRT84	1
8406	KRT85	2.186990e-01
8407	KRT86	1
8408	KRT9	1
8409	KRTAP1-1	1.029049e-02
8410	KRTAP1-3	1
8411	KRTAP1-5	1
8412	KRTAP10-1	5.210267e-02
8413	KRTAP10-10	3.367441e-02
Done

Running MutSig 2:
Scatter job 93: processing genes 8324 - 8413
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
KRAS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.803670e-01	ci left: 4.101996e-02	ci right 4.924766e-02	k: 450	n:10000
Cons ci ratio: 3.733977e-01	ci left: 8.867630e-03	ci right 1.302464e-02	k: 108	n:10000
KS ci ratio: 1.081046e-01	ci left: 1.098838e-01	ci right 1.225407e-01	k: 1161	n:10000
KRAS   10000 perm   2 sec   (6389 perm/sec)   p_kst 1.161000e-01   p_cons 1.080000e-02   p_joint 4.500000e-02

Joint ci ratio: 1.566712e-01	ci left: 2.796788e-02	ci right 3.276994e-02	k: 606	n:20000
Cons ci ratio: 2.628223e-01	ci left: 9.554158e-03	ci right 1.249060e-02	k: 219	n:20000
KS ci ratio: 7.529283e-02	ci left: 1.148383e-01	ci right 1.238727e-01	k: 2386	n:20000
KRAS   20000 perm   7 sec   (2892 perm/sec)   p_kst 1.193000e-01   p_cons 1.095000e-02   p_joint 3.030000e-02

Joint ci ratio: 1.362934e-01	ci left: 2.500178e-02	ci right 2.869062e-02	k: 804	n:30000
Cons ci ratio: 2.193492e-01	ci left: 9.377501e-03	ci right 1.171874e-02	k: 315	n:30000
KS ci ratio: 6.193427e-02	ci left: 1.141397e-01	ci right 1.214679e-01	k: 3533	n:30000
KRAS   30000 perm   9 sec   (3340 perm/sec)   p_kst 1.177667e-01   p_cons 1.050000e-02   p_joint 2.680000e-02

Joint ci ratio: 1.449724e-01	ci left: 1.664736e-02	ci right 1.927329e-02	k: 717	n:40000
Cons ci ratio: 1.909577e-01	ci left: 9.428988e-03	ci right 1.144304e-02	k: 416	n:40000
KS ci ratio: 5.388340e-02	ci left: 1.136926e-01	ci right 1.200132e-01	k: 4673	n:40000
KRAS   40000 perm   11 sec   (3603 perm/sec)   p_kst 1.168250e-01   p_cons 1.040000e-02   p_joint 1.792500e-02

Joint ci ratio: 1.194056e-01	ci left: 1.983873e-02	ci right 2.237730e-02	k: 1054	n:50000
Cons ci ratio: 1.698539e-01	ci left: 9.644224e-03	ci right 1.145328e-02	k: 526	n:50000
KS ci ratio: 4.816453e-02	ci left: 1.141554e-01	ci right 1.198092e-01	k: 5848	n:50000
KRAS   50000 perm   13 sec   (3750 perm/sec)   p_kst 1.169600e-01   p_cons 1.052000e-02   p_joint 2.108000e-02

Joint ci ratio: 1.238072e-01	ci left: 1.541501e-02	ci right 1.746548e-02	k: 985	n:60000
Cons ci ratio: 1.547338e-01	ci left: 9.763920e-03	ci right 1.141727e-02	k: 634	n:60000
KS ci ratio: 4.380846e-02	ci left: 1.151482e-01	ci right 1.203222e-01	k: 7063	n:60000
KRAS   60000 perm   16 sec   (3834 perm/sec)   p_kst 1.177167e-01   p_cons 1.056667e-02   p_joint 1.641667e-02

Joint ci ratio: 1.131977e-01	ci left: 1.588862e-02	ci right 1.780888e-02	k: 1178	n:70000
Cons ci ratio: 1.417014e-01	ci left: 1.004750e-02	ci right 1.159345e-02	k: 756	n:70000
KS ci ratio: 4.054299e-02	ci left: 1.154206e-01	ci right 1.202111e-01	k: 8246	n:70000
KRAS   70000 perm   18 sec   (3878 perm/sec)   p_kst 1.178000e-01   p_cons 1.080000e-02   p_joint 1.682857e-02

Joint ci ratio: 1.113232e-01	ci left: 1.441218e-02	ci right 1.612324e-02	k: 1220	n:80000
Cons ci ratio: 1.323289e-01	ci left: 1.013157e-02	ci right 1.157924e-02	k: 867	n:80000
KS ci ratio: 3.797739e-02	ci left: 1.152886e-01	ci right 1.197641e-01	k: 9401	n:80000
KRAS   80000 perm   21 sec   (3891 perm/sec)   p_kst 1.175125e-01   p_cons 1.083750e-02   p_joint 1.525000e-02

Joint ci ratio: 1.135107e-01	ci left: 1.233492e-02	ci right 1.383004e-02	k: 1176	n:90000
Cons ci ratio: 1.257740e-01	ci left: 1.000578e-02	ci right 1.135937e-02	k: 960	n:90000
KS ci ratio: 3.583088e-02	ci left: 1.152707e-01	ci right 1.194873e-01	k: 10563	n:90000
KRAS   90000 perm   23 sec   (3888 perm/sec)   p_kst 1.173667e-01   p_cons 1.066667e-02   p_joint 1.306667e-02

Joint ci ratio: 1.027352e-01	ci left: 1.361225e-02	ci right 1.509612e-02	k: 1434	n:100000
Cons ci ratio: 1.188581e-01	ci left: 1.012007e-02	ci right 1.140855e-02	k: 1075	n:100000
KS ci ratio: 3.396559e-02	ci left: 1.155401e-01	ci right 1.195422e-01	k: 11753	n:100000
KRAS   100000 perm   26 sec   (3875 perm/sec)   p_kst 1.175300e-01   p_cons 1.075000e-02   p_joint 1.434000e-02

Joint ci ratio: 8.818719e-02	ci left: 1.686671e-02	ci right 1.843160e-02	k: 1940	n:110000
Cons ci ratio: 1.134043e-01	ci left: 1.013572e-02	ci right 1.136301e-02	k: 1181	n:110000
KS ci ratio: 3.249811e-02	ci left: 1.149166e-01	ci right 1.187218e-01	k: 12849	n:110000
KRAS   110000 perm   29 sec   (3846 perm/sec)   p_kst 1.168091e-01   p_cons 1.073636e-02   p_joint 1.763636e-02

Joint ci ratio: 7.894404e-02	ci left: 1.933791e-02	ci right 2.093539e-02	k: 2415	n:120000
Cons ci ratio: 1.095446e-01	ci left: 9.979615e-03	ci right 1.114422e-02	k: 1266	n:120000
KS ci ratio: 3.114375e-02	ci left: 1.148058e-01	ci right 1.184461e-01	k: 13994	n:120000
KRAS   120000 perm   31 sec   (3823 perm/sec)   p_kst 1.166167e-01   p_cons 1.055000e-02   p_joint 2.012500e-02

Joint ci ratio: 7.136158e-02	ci left: 2.187448e-02	ci right 2.350076e-02	k: 2948	n:130000
Cons ci ratio: 1.054641e-01	ci left: 9.960496e-03	ci right 1.107688e-02	k: 1366	n:130000
KS ci ratio: 2.986762e-02	ci left: 1.152498e-01	ci right 1.187519e-01	k: 15209	n:130000
KRAS   130000 perm   34 sec   (3785 perm/sec)   p_kst 1.169923e-01   p_cons 1.050769e-02   p_joint 2.267692e-02

Joint ci ratio: 7.489323e-02	ci left: 1.847355e-02	ci right 1.991789e-02	k: 2686	n:140000
Cons ci ratio: 1.015983e-01	ci left: 9.986579e-03	ci right 1.106241e-02	k: 1472	n:140000
KS ci ratio: 2.875235e-02	ci left: 1.155194e-01	ci right 1.188964e-01	k: 16408	n:140000
KRAS   140000 perm   37 sec   (3756 perm/sec)   p_kst 1.172000e-01   p_cons 1.051429e-02   p_joint 1.918571e-02

Joint ci ratio: 7.014889e-02	ci left: 1.967746e-02	ci right 2.111450e-02	k: 3058	n:150000
Cons ci ratio: 9.819147e-02	ci left: 9.996822e-03	ci right 1.103556e-02	k: 1576	n:150000
KS ci ratio: 2.776585e-02	ci left: 1.156624e-01	ci right 1.189257e-01	k: 17593	n:150000
KRAS   150000 perm   40 sec   (3722 perm/sec)   p_kst 1.172867e-01   p_cons 1.050667e-02   p_joint 2.038667e-02

Outputting figure to mutsig2_images.part000000000093/KRAS.3_707_150000_0.11729_0.010507_0.020387.png
                gene_name: KRAS
               theta_stop: 0.098 
                    nperm: 150000 
                     p_ks: 0.12 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.011 
      ci_cons_bounds_left: 0.0100 
     ci_cons_bounds_right: 0.011 
                  p_joint: 0.020 
     ci_joint_bounds_left: 0.020 
    ci_joint_bounds_right: 0.021 

Current progress: 33 percent done.
KPNA1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.127910e-02	ci left: 7.640535e-01	ci right 7.805875e-01	k: 7724	n:10000
Cons ci ratio: 2.209473e-02	ci left: 7.503916e-01	ci right 7.672574e-01	k: 7589	n:10000
KS ci ratio: 2.969142e-02	ci left: 6.258780e-01	ci right 6.448431e-01	k: 6354	n:10000
KPNA1   10000 perm   2 sec   (6542 perm/sec)   p_kst 6.354000e-01   p_cons 7.589000e-01   p_joint 7.724000e-01

Outputting figure to mutsig2_images.part000000000093/KPNA1.2_1669_10000_0.6354_0.7589_0.7724.png
                gene_name: KPNA1
               theta_stop: 0.030 
                    nperm: 10000 
                     p_ks: 0.64 
        ci_ks_bounds_left: 0.63 
       ci_ks_bounds_right: 0.64 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.75 
     ci_cons_bounds_right: 0.77 
                  p_joint: 0.77 
     ci_joint_bounds_left: 0.76 
    ci_joint_bounds_right: 0.78 

Current progress: 67 percent done.
KRT35
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.080668e-02	ci left: 7.719526e-01	ci right 7.882839e-01	k: 7802	n:10000
KS ci ratio: 2.047888e-02	ci left: 7.774236e-01	ci right 7.936097e-01	k: 7856	n:10000
KRT35   10000 perm   2 sec   (6397 perm/sec)   p_kst 7.856000e-01   p_cons 7.802000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000093/KRT35.2_1396_10000_0.7856_0.7802_1.png
                gene_name: KRT35
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.79 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000093
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 93 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1701>
Subject: Job 8704250: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1701>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000094> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:36:41 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000094.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000094.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 94  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000094.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    180.33 sec.
    Max Memory :      5687 MB
    Max Swap   :      8422 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
94
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 94
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 94: processing genes 8414 - 8504
Calculating significance of each gene.
Using projection method.
8414	KRTAP10-11	1.208780e-01
8415	KRTAP10-12	1
8416	KRTAP10-2	1
8417	KRTAP10-3	1.701386e-02
8418	KRTAP10-4	1.002553e-01
8419	KRTAP10-5	1.385670e-01
8420	KRTAP10-6	1
8421	KRTAP10-7	1
8422	KRTAP10-8	1
8423	KRTAP10-9	1
8424	KRTAP11-1	1
8425	KRTAP12-1	1
8426	KRTAP12-2	1
8427	KRTAP12-3	1
8428	KRTAP12-4	1
8429	KRTAP13-1	1
8430	KRTAP13-2	1
8431	KRTAP13-3	1
8432	KRTAP13-4	1
8433	KRTAP15-1	1
8434	KRTAP17-1	1
8435	KRTAP19-1	1
8436	KRTAP19-2	1
8437	KRTAP19-3	1
8438	KRTAP19-4	1
8439	KRTAP19-5	1
8440	KRTAP19-6	1
8441	KRTAP19-7	1
8442	KRTAP19-8	1
8443	KRTAP20-1	1
8444	KRTAP20-2	1
8445	KRTAP21-1	1
8446	KRTAP21-2	1
8447	KRTAP22-1	1
8448	KRTAP23-1	1
8449	KRTAP24-1	1
8450	KRTAP26-1	1
8451	KRTAP27-1	4.001496e-02
8452	KRTAP3-1	1
8453	KRTAP3-2	1
8454	KRTAP3-3	1.040005e-02
8455	KRTAP4-1	1
8456	KRTAP4-11	7.290887e-02
8457	KRTAP4-12	1
8458	KRTAP4-2	3.241953e-02
8459	KRTAP4-3	1
8460	KRTAP4-4	1.135071e-04
8461	KRTAP4-5	1
8462	KRTAP4-7	1
8463	KRTAP4-8	1
8464	KRTAP4-9	4.893604e-02
8465	KRTAP5-1	1
8466	KRTAP5-10	1
8467	KRTAP5-11	1
8468	KRTAP5-2	1
8469	KRTAP5-3	3.349177e-02
8470	KRTAP5-4	2.407783e-02
8471	KRTAP5-5	1
8472	KRTAP5-6	1
8473	KRTAP5-7	1
8474	KRTAP5-8	1
8475	KRTAP5-9	1
8476	KRTAP6-1	1
8477	KRTAP6-2	1.298908e-02
8478	KRTAP6-3	1
8479	KRTAP8-1	5.794190e-03
8480	KRTAP9-2	1
8481	KRTAP9-3	1
8482	KRTAP9-4	1
8483	KRTAP9-8	1
8484	KRTAP9-9	1
8485	KRTCAP2	1
8486	KRTCAP3	1.735961e-02
8487	KRTDAP	1
8488	KSR1	1
8489	KSR2	7.871469e-02
8490	KTELC1	1
8491	KTI12	1.986652e-01
8492	KTN1	1
8493	KY	1
8494	KYNU	1
8495	L1CAM	1
8496	L1TD1	1.180729e-01
8497	L2HGDH	1
8498	L3MBTL	1
8499	L3MBTL2	1
8500	L3MBTL3	1
8501	L3MBTL4	1
8502	LACE1	1
8503	LACRT	1
8504	LACTB	1
Done

Running MutSig 2:
Scatter job 94: processing genes 8414 - 8504
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
KRTAP4-12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.422642e-02	ci left: 7.147204e-01	ci right 7.323492e-01	k: 7236	n:10000
KS ci ratio: 4.253351e-02	ci left: 4.493959e-01	ci right 4.690278e-01	k: 4592	n:10000
KRTAP4-12   10000 perm   2 sec   (5198 perm/sec)   p_kst 4.592000e-01   p_cons 7.236000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000094/KRTAP4-12.3_610_10000_0.4592_0.7236_1.png
                gene_name: KRTAP4-12
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
KRTAP4-4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.038998e-01	ci left: 1.180892e-01	ci right 1.311304e-01	k: 1245	n:10000
Cons ci ratio: 6.017928e-02	ci left: 2.888472e-01	ci right 3.068707e-01	k: 2978	n:10000
KS ci ratio: 1.038998e-01	ci left: 1.180892e-01	ci right 1.311304e-01	k: 1245	n:10000
KRTAP4-4   10000 perm   1 sec   (7639 perm/sec)   p_kst 1.245000e-01   p_cons 2.978000e-01   p_joint 1.245000e-01

Joint ci ratio: 2.306955e-02	ci left: 5.838978e-01	ci right 5.975758e-01	k: 11815	n:20000
Cons ci ratio: 4.295861e-02	ci left: 2.875919e-01	ci right 3.002681e-01	k: 5878	n:20000
KS ci ratio: 7.321807e-02	ci left: 1.207415e-01	ci right 1.299677e-01	k: 2506	n:20000
KRTAP4-4   20000 perm   3 sec   (6694 perm/sec)   p_kst 1.253000e-01   p_cons 2.939000e-01   p_joint 5.907500e-01

Outputting figure to mutsig2_images.part000000000094/KRTAP4-4.2_505_20000_0.1253_0.2939_0.59075.png
                gene_name: KRTAP4-4
               theta_stop: 0.073 
                    nperm: 20000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.29 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.30 
                  p_joint: 0.59 
     ci_joint_bounds_left: 0.58 
    ci_joint_bounds_right: 0.60 

Current progress: 67 percent done.
KSR2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.447185e-02	ci left: 2.611186e-01	ci right 2.786156e-01	k: 2698	n:10000
Cons ci ratio: 6.498281e-02	ci left: 2.580513e-01	ci right 2.754848e-01	k: 2667	n:10000
KS ci ratio: 6.518270e-02	ci left: 2.568641e-01	ci right 2.742727e-01	k: 2655	n:10000
KSR2   10000 perm   2 sec   (5730 perm/sec)   p_kst 2.655000e-01   p_cons 2.667000e-01   p_joint 2.698000e-01

Outputting figure to mutsig2_images.part000000000094/KSR2.2_2846_10000_0.2655_0.2667_0.2698.png
                gene_name: KSR2
               theta_stop: 0.065 
                    nperm: 10000 
                     p_ks: 0.27 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.27 
                   p_cons: 0.27 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.28 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.26 
    ci_joint_bounds_right: 0.28 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000094
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 94 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1708>
Subject: Job 8704252: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1708>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000095> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:37:06 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000095.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000095.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 95  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000095.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    188.94 sec.
    Max Memory :      6057 MB
    Max Swap   :      8515 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
95
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 95
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 95: processing genes 8505 - 8594
Calculating significance of each gene.
Using projection method.
8505	LACTB2	1
8506	LAD1	1
8507	LAG3	1
8508	LAGE3	1
8509	LAIR1	1
8510	LAIR2	1
8511	LALBA	1
8512	LAMA1	1
8513	LAMA2	5.163735e-01
8514	LAMA3	3.021377e-01
8515	LAMA4	5.202927e-02
8516	LAMA5	7.305772e-01
8517	LAMB1	3.161576e-01
8518	LAMB2	4.991531e-01
8519	LAMB3	1
8520	LAMB4	3.097068e-01
8521	LAMC1	6.457428e-02
8522	LAMC2	3.926749e-01
8523	LAMC3	3.464954e-01
8524	LAMP1	1
8525	LAMP2	1
8526	LAMP3	6.361447e-03
8527	LANCL1	1
8528	LANCL2	1
8529	LANCL3	1
8530	LAP3	1
8531	LAPTM4A	1
8532	LAPTM4B	1
8533	LAPTM5	1
8534	LARGE	1
In gene LARP1 the following bins exceed PROBCAP:
    THCA-DJ-A2PO-TP	categ 6	N = 3136    n = 1	mu =   3.61e-08
8535	LARP1	2.466079e-03
8536	LARP1B	1
8537	LARP4	1
8538	LARP4B	2.109539e-01
8539	LARP6	1
8540	LARP7	1
8541	LARS	2.411067e-01
8542	LARS2	1
8543	LAS1L	1
8544	LASP1	1
8545	LASS1	1
8546	LASS2	2.116057e-02
8547	LASS3	1
8548	LASS4	1
8549	LASS5	1
8550	LASS6	8.906939e-02
8551	LAT	1
8552	LAT2	1
8553	LATS1	2.374212e-01
8554	LATS2	2.488181e-01
8555	LAX1	1
8556	LAYN	1
8557	LBH	4.003639e-02
8558	LBP	8.295839e-02
8559	LBR	1
8560	LBX1	1
8561	LBX2	1
8562	LBXCOR1	1
8563	LCA5	4.459554e-02
8564	LCA5L	1
8565	LCAT	1
8566	LCE1A	1
8567	LCE1B	1
8568	LCE1C	1
8569	LCE1D	1
8570	LCE1E	2.009150e-02
8571	LCE1F	1
8572	LCE2A	1
8573	LCE2B	1
8574	LCE2C	1
8575	LCE2D	1
8576	LCE3A	1
8577	LCE3B	1
8578	LCE3C	1
8579	LCE3D	1
8580	LCE3E	1
8581	LCE4A	1
8582	LCE5A	1
8583	LCK	1.562418e-01
8584	LCLAT1	1
8585	LCMT1	6.358476e-03
8586	LCMT2	1
8587	LCN1	1
8588	LCN10	1
8589	LCN12	1
8590	LCN15	1
8591	LCN2	1
8592	LCN6	1
8593	LCN8	1
8594	LCN9	1
Done

Running MutSig 2:
Scatter job 95: processing genes 8505 - 8594
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
LAMA4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.956251e-01	ci left: 3.481398e-02	ci right 4.245779e-02	k: 385	n:10000
Cons ci ratio: 1.422220e-01	ci left: 6.555836e-02	ci right 7.569349e-02	k: 705	n:10000
KS ci ratio: 9.035409e-02	ci left: 1.511960e-01	ci right 1.656036e-01	k: 1583	n:10000
LAMA4   10000 perm   2 sec   (4712 perm/sec)   p_kst 1.583000e-01   p_cons 7.050000e-02   p_joint 3.850000e-02

Joint ci ratio: 1.240530e-01	ci left: 4.459306e-02	ci right 5.053936e-02	k: 950	n:20000
Cons ci ratio: 1.029821e-01	ci left: 6.406102e-02	ci right 7.106534e-02	k: 1350	n:20000
KS ci ratio: 6.450905e-02	ci left: 1.507991e-01	ci right 1.609012e-01	k: 3116	n:20000
LAMA4   20000 perm   7 sec   (3033 perm/sec)   p_kst 1.558000e-01   p_cons 6.750000e-02   p_joint 4.750000e-02

Joint ci ratio: 8.520659e-02	ci left: 6.308525e-02	ci right 6.873250e-02	k: 1976	n:30000
Cons ci ratio: 8.385242e-02	ci left: 6.504582e-02	ci right 7.077154e-02	k: 2036	n:30000
KS ci ratio: 5.272179e-02	ci left: 1.514821e-01	ci right 1.597180e-01	k: 4667	n:30000
LAMA4   30000 perm   9 sec   (3279 perm/sec)   p_kst 1.555667e-01   p_cons 6.786667e-02   p_joint 6.586667e-02

Outputting figure to mutsig2_images.part000000000095/LAMA4.3_5792_30000_0.15557_0.067867_0.065867.png
                gene_name: LAMA4
               theta_stop: 0.085 
                    nperm: 30000 
                     p_ks: 0.16 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.068 
      ci_cons_bounds_left: 0.065 
     ci_cons_bounds_right: 0.071 
                  p_joint: 0.066 
     ci_joint_bounds_left: 0.063 
    ci_joint_bounds_right: 0.069 

Current progress: 17 percent done.
LARP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.515566e-02	ci left: 3.262447e-01	ci right 3.448511e-01	k: 3355	n:10000
Cons ci ratio: 1.091164e-01	ci left: 1.080293e-01	ci right 1.205964e-01	k: 1142	n:10000
KS ci ratio: 1.852255e-02	ci left: 8.097874e-01	ci right 8.250272e-01	k: 8175	n:10000
LARP1   10000 perm   2 sec   (5510 perm/sec)   p_kst 8.175000e-01   p_cons 1.142000e-01   p_joint 3.355000e-01

Joint ci ratio: 4.177792e-02	ci left: 2.992193e-01	ci right 3.120372e-01	k: 6112	n:20000
Cons ci ratio: 7.536455e-02	ci left: 1.146416e-01	ci right 1.236695e-01	k: 2382	n:20000
KS ci ratio: 1.311895e-02	ci left: 8.115702e-01	ci right 8.223375e-01	k: 16340	n:20000
LARP1   20000 perm   4 sec   (4950 perm/sec)   p_kst 8.170000e-01   p_cons 1.191000e-01   p_joint 3.056000e-01

Outputting figure to mutsig2_images.part000000000095/LARP1.3_3136_20000_0.817_0.1191_0.3056.png
                gene_name: LARP1
               theta_stop: 0.075 
                    nperm: 20000 
                     p_ks: 0.82 
        ci_ks_bounds_left: 0.81 
       ci_ks_bounds_right: 0.82 
                   p_cons: 0.12 
      ci_cons_bounds_left: 0.11 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.31 

Current progress: 33 percent done.
LAMA3
Processing conservation and coverage...
95% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.183198e-01	ci left: 9.301905e-02	ci right 1.048158e-01	k: 988	n:10000
Cons ci ratio: 1.969557e-01	ci left: 3.433772e-02	ci right 4.193438e-02	k: 380	n:10000
KS ci ratio: 1.813674e-02	ci left: 8.160871e-01	ci right 8.311239e-01	k: 8237	n:10000
LAMA3   10000 perm   3 sec   (3169 perm/sec)   p_kst 8.237000e-01   p_cons 3.800000e-02   p_joint 9.880000e-02

Joint ci ratio: 1.031050e-01	ci left: 6.391463e-02	ci right 7.091178e-02	k: 1347	n:20000
Cons ci ratio: 1.408160e-01	ci left: 3.466792e-02	ci right 3.996769e-02	k: 745	n:20000
KS ci ratio: 1.275567e-02	ci left: 8.199148e-01	ci right 8.304905e-01	k: 16505	n:20000
LAMA3   20000 perm   8 sec   (2574 perm/sec)   p_kst 8.252500e-01   p_cons 3.725000e-02   p_joint 6.735000e-02

Joint ci ratio: 8.180295e-02	ci left: 6.818418e-02	ci right 7.403254e-02	k: 2132	n:30000
Cons ci ratio: 1.143939e-01	ci left: 3.550805e-02	ci right 3.984874e-02	k: 1129	n:30000
KS ci ratio: 1.051517e-02	ci left: 8.180948e-01	ci right 8.267760e-01	k: 24674	n:30000
LAMA3   30000 perm   12 sec   (2512 perm/sec)   p_kst 8.224667e-01   p_cons 3.763333e-02   p_joint 7.106667e-02

Joint ci ratio: 6.791868e-02	ci left: 7.425807e-02	ci right 7.950355e-02	k: 3074	n:40000
Cons ci ratio: 9.922822e-02	ci left: 3.568374e-02	ci right 3.943378e-02	k: 1501	n:40000
KS ci ratio: 9.131807e-03	ci left: 8.178628e-01	ci right 8.253905e-01	k: 32866	n:40000
LAMA3   40000 perm   16 sec   (2548 perm/sec)   p_kst 8.216500e-01   p_cons 3.752500e-02   p_joint 7.685000e-02

Outputting figure to mutsig2_images.part000000000095/LAMA3.2_10477_40000_0.82165_0.037525_0.07685.png
                gene_name: LAMA3
               theta_stop: 0.099 
                    nperm: 40000 
                     p_ks: 0.82 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.038 
      ci_cons_bounds_left: 0.036 
     ci_cons_bounds_right: 0.039 
                  p_joint: 0.077 
     ci_joint_bounds_left: 0.074 
    ci_joint_bounds_right: 0.080 

Current progress: 50 percent done.
LAMC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.619910e-02	ci left: 4.088062e-01	ci right 4.282413e-01	k: 4185	n:10000
Cons ci ratio: 8.290783e-02	ci left: 1.750712e-01	ci right 1.903141e-01	k: 1826	n:10000
KS ci ratio: 7.767639e-03	ci left: 9.583798e-01	ci right 9.659480e-01	k: 9623	n:10000
LAMC1   10000 perm   2 sec   (5031 perm/sec)   p_kst 9.623000e-01   p_cons 1.826000e-01   p_joint 4.185000e-01

Outputting figure to mutsig2_images.part000000000095/LAMC1.2_4942_10000_0.9623_0.1826_0.4185.png
                gene_name: LAMC1
               theta_stop: 0.083 
                    nperm: 10000 
                     p_ks: 0.96 
        ci_ks_bounds_left: 0.96 
       ci_ks_bounds_right: 0.97 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.42 
     ci_joint_bounds_left: 0.41 
    ci_joint_bounds_right: 0.43 

Current progress: 67 percent done.
LAMP3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.997850e-02	ci left: 2.902347e-01	ci right 3.082824e-01	k: 2992	n:10000
Cons ci ratio: 9.083148e-02	ci left: 1.498222e-01	ci right 1.641783e-01	k: 1569	n:10000
KS ci ratio: 2.298170e-02	ci left: 7.355281e-01	ci right 7.527294e-01	k: 7442	n:10000
LAMP3   10000 perm   2 sec   (6547 perm/sec)   p_kst 7.442000e-01   p_cons 1.569000e-01   p_joint 2.992000e-01

Outputting figure to mutsig2_images.part000000000095/LAMP3.2_1275_10000_0.7442_0.1569_0.2992.png
                gene_name: LAMP3
               theta_stop: 0.091 
                    nperm: 10000 
                     p_ks: 0.74 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.75 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.31 

Current progress: 83 percent done.
LCMT1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.237715e-02	ci left: 2.185242e-01	ci right 2.350353e-01	k: 2267	n:10000
KS ci ratio: 4.461276e-02	ci left: 4.258518e-01	ci right 4.453858e-01	k: 4356	n:10000
LCMT1   10000 perm   2 sec   (6638 perm/sec)   p_kst 4.356000e-01   p_cons 2.267000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000095/LCMT1.2_1049_10000_0.4356_0.2267_1.png
                gene_name: LCMT1
               theta_stop: 0.072 
                    nperm: 10000 
                     p_ks: 0.44 
        ci_ks_bounds_left: 0.43 
       ci_ks_bounds_right: 0.45 
                   p_cons: 0.23 
      ci_cons_bounds_left: 0.22 
     ci_cons_bounds_right: 0.24 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000095
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 95 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1710>
Subject: Job 8704254: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1710>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000096> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:36:40 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000096.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000096.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 96  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000096.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    166.98 sec.
    Max Memory :      5662 MB
    Max Swap   :      8406 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
96
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 96
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 96: processing genes 8595 - 8685
Calculating significance of each gene.
Using projection method.
8595	LCNL1	1
8596	LCOR	1
8597	LCORL	1
8598	LCP1	1
8599	LCP2	1
8600	LCT	4.800836e-01
8601	LCTL	1
8602	LDB1	1
8603	LDB2	1
8604	LDB3	1
8605	LDHA	1.075485e-02
8606	LDHAL6A	1
8607	LDHAL6B	1
8608	LDHB	1
8609	LDHC	1
8610	LDHD	1
8611	LDLR	1
8612	LDLRAD1	1
8613	LDLRAD2	1
8614	LDLRAD3	8.357783e-02
8615	LDLRAP1	1
8616	LDOC1	1
8617	LDOC1L	1
8618	LEAP2	1
8619	LECT1	1
8620	LECT2	9.168629e-03
8621	LEF1	1.992923e-01
8622	LEFTY1	1
8623	LEFTY2	1
8624	LEKR1	1
8625	LELP1	1
8626	LEMD1	1
8627	LEMD2	1.018829e-01
8628	LEMD3	1
8629	LENEP	1
8630	LENG1	1
8631	LENG8	1.163123e-01
8632	LENG9	1
8633	LEO1	1
8634	LEP	1
8635	LEPR	1
8636	LEPRE1	1
8637	LEPREL1	1
8638	LEPREL2	1
8639	LEPROT	1
8640	LEPROTL1	1
8641	LETM1	2.951987e-02
8642	LETM2	8.473752e-02
8643	LETMD1	7.272019e-02
8644	LFNG	1
8645	LGALS1	1
8646	LGALS12	1
8647	LGALS13	1.313851e-02
8648	LGALS14	1
8649	LGALS2	1
8650	LGALS3	1
8651	LGALS3BP	1
8652	LGALS4	1
8653	LGALS7B	1
8654	LGALS8	1
8655	LGALS9	1
8656	LGALS9B	1
8657	LGALS9C	1
8658	LGI1	1
8659	LGI2	1
8660	LGI3	1.373441e-01
8661	LGI4	1
8662	LGMN	1
8663	LGR4	1
8664	LGR5	2.629802e-01
8665	LGR6	1
8666	LGSN	1
8667	LGTN	1
8668	LHB	1
8669	LHCGR	1
8670	LHFP	1
8671	LHFPL1	1
8672	LHFPL2	1
8673	LHFPL3	1
8674	LHFPL4	1
8675	LHFPL5	1
8676	LHPP	1
8677	LHX1	1
8678	LHX2	1
8679	LHX3	1
8680	LHX4	1
8681	LHX5	1
8682	LHX6	1
8683	LHX8	1
8684	LHX9	1
8685	LIAS	1
Done

Running MutSig 2:
Scatter job 96: processing genes 8595 - 8685
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
LDHA
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.284434e-01	ci left: 7.970251e-02	ci right 9.074052e-02	k: 851	n:10000
Cons ci ratio: 2.228902e-01	ci left: 2.664945e-02	ci right 3.342800e-02	k: 299	n:10000
KS ci ratio: 2.555722e-02	ci left: 6.926251e-01	ci right 7.106573e-01	k: 7017	n:10000
LDHA   10000 perm   2 sec   (6410 perm/sec)   p_kst 7.017000e-01   p_cons 2.990000e-02   p_joint 8.510000e-02

Joint ci ratio: 9.623711e-02	ci left: 7.290196e-02	ci right 8.032169e-02	k: 1531	n:20000
Cons ci ratio: 1.581552e-01	ci left: 2.743895e-02	ci right 3.219905e-02	k: 595	n:20000
KS ci ratio: 1.778556e-02	ci left: 7.019958e-01	ci right 7.146436e-01	k: 14167	n:20000
LDHA   20000 perm   6 sec   (3578 perm/sec)   p_kst 7.083500e-01   p_cons 2.975000e-02   p_joint 7.655000e-02

Joint ci ratio: 7.813681e-02	ci left: 7.436775e-02	ci right 8.044773e-02	k: 2321	n:30000
Cons ci ratio: 1.268842e-01	ci left: 2.887377e-02	ci right 3.281777e-02	k: 924	n:30000
KS ci ratio: 1.461045e-02	ci left: 7.006406e-01	ci right 7.109861e-01	k: 21175	n:30000
LDHA   30000 perm   8 sec   (3937 perm/sec)   p_kst 7.058333e-01   p_cons 3.080000e-02   p_joint 7.736667e-02

Joint ci ratio: 9.021275e-02	ci left: 4.303797e-02	ci right 4.712840e-02	k: 1802	n:40000
Cons ci ratio: 1.103168e-01	ci left: 2.890948e-02	ci right 3.230912e-02	k: 1223	n:40000
KS ci ratio: 1.264724e-02	ci left: 7.015331e-01	ci right 7.104870e-01	k: 28241	n:40000
LDHA   40000 perm   10 sec   (4128 perm/sec)   p_kst 7.060250e-01   p_cons 3.057500e-02   p_joint 4.505000e-02

Joint ci ratio: 5.301111e-02	ci left: 9.596070e-02	ci right 1.012060e-01	k: 4928	n:50000
Cons ci ratio: 9.954651e-02	ci left: 2.858065e-02	ci right 3.159424e-02	k: 1503	n:50000
KS ci ratio: 1.133455e-02	ci left: 7.011816e-01	ci right 7.091945e-01	k: 35260	n:50000
LDHA   50000 perm   12 sec   (4222 perm/sec)   p_kst 7.052000e-01   p_cons 3.006000e-02   p_joint 9.856000e-02

Outputting figure to mutsig2_images.part000000000096/LDHA.2_1213_50000_0.7052_0.03006_0.09856.png
                gene_name: LDHA
               theta_stop: 0.100 
                    nperm: 50000 
                     p_ks: 0.71 
        ci_ks_bounds_left: 0.70 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.030 
      ci_cons_bounds_left: 0.029 
     ci_cons_bounds_right: 0.032 
                  p_joint: 0.099 
     ci_joint_bounds_left: 0.096 
    ci_joint_bounds_right: 0.10 

Current progress: 50 percent done.
LETM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.714896e-02	ci left: 6.665257e-01	ci right 6.849718e-01	k: 6758	n:10000
Cons ci ratio: 3.430079e-02	ci left: 5.565186e-01	ci right 5.760428e-01	k: 5663	n:10000
KS ci ratio: 5.465244e-02	ci left: 3.303159e-01	ci right 3.489775e-01	k: 3396	n:10000
LETM1   10000 perm   2 sec   (5990 perm/sec)   p_kst 3.396000e-01   p_cons 5.663000e-01   p_joint 6.758000e-01

Outputting figure to mutsig2_images.part000000000096/LETM1.2_2276_10000_0.3396_0.5663_0.6758.png
                gene_name: LETM1
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.34 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.35 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.68 
     ci_joint_bounds_left: 0.67 
    ci_joint_bounds_right: 0.68 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000096
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 96 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1642>
Subject: Job 8704256: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1642>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000097> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 20:06:10 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000097.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000097.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 97  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000097.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   2055.71 sec.
    Max Memory :      5768 MB
    Max Swap   :      8668 MB

    Max Processes  :         7
    Max Threads    :        94

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
97
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 97
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 97: processing genes 8686 - 8775
Calculating significance of each gene.
Using projection method.
8686	LIF	1
8687	LIFR	1
8688	LIG1	1
8689	LIG3	1
8690	LIG4	1.792453e-01
8691	LILRA1	1
8692	LILRA2	7.056250e-02
8693	LILRA3	1
8694	LILRA4	1
8695	LILRA5	1
8696	LILRA6	1
8697	LILRB1	1
8698	LILRB2	1
8699	LILRB3	1.376531e-01
8700	LILRB4	8.677773e-02
8701	LILRB5	1
8702	LIM2	1
8703	LIMA1	1
8704	LIMCH1	1
8705	LIMD1	1.642361e-01
8706	LIMD2	1
8707	LIME1	1
8708	LIMK1	1
8709	LIMK2	1
8710	LIMS1	1
8711	LIMS2	1
8712	LIN28A	1
8713	LIN28B	1
8714	LIN37	1
8715	LIN52	1
8716	LIN54	2.666834e-01
8717	LIN7A	1
8718	LIN7B	1
8719	LIN7C	1
8720	LIN9	1
8721	LINGO1	1
8722	LINGO2	2.548731e-01
8723	LINGO3	1
8724	LINGO4	1
8725	LINS1	1
8726	LIPA	1
8727	LIPC	1
8728	LIPE	2.339240e-01
8729	LIPF	1
8730	LIPG	1
8731	LIPH	1
8732	LIPI	1
8733	LIPJ	1
8734	LIPK	1
8735	LIPN	1
8736	LIPT1	1.418719e-01
8737	LITAF	1
8738	LIX1	1
8739	LIX1L	1
8740	LLGL1	1
8741	LLGL2	1
8742	LLPH	1
8743	LMAN1	1
8744	LMAN1L	1
8745	LMAN2	1
8746	LMAN2L	1
8747	LMBR1	1
8748	LMBR1L	1
8749	LMBRD1	1
8750	LMBRD2	1
8751	LMCD1	1
8752	LMF1	1
8753	LMF2	1
8754	LMLN	1
8755	LMNA	1
8756	LMNB1	1
8757	LMNB2	1
8758	LMO1	1
8759	LMO2	1
8760	LMO3	1
8761	LMO4	1
8762	LMO7	1
8763	LMOD1	1
8764	LMOD2	1
8765	LMOD3	8.099263e-02
8766	LMTK2	1
8767	LMTK3	1
8768	LMX1A	6.664940e-02
In gene LMX1B the following bins exceed PROBCAP:
    THCA-FE-A3PB-TP	categ 6	N = 981     n = 1	mu =   1.02e-07
8769	LMX1B	3.698507e-03
8770	LNP1	2.927178e-02
8771	LNPEP	1
8772	LNX1	2.347660e-01
8773	LNX2	1
8774	LOC100130932	1
8775	LOC100302652	1
Done

Running MutSig 2:
Scatter job 97: processing genes 8686 - 8775
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
LMX1B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 2.125218e-01	ci left: 2.939568e-02	ci right 3.647982e-02	k: 328	n:10000
KS ci ratio: 1.181215e+00	ci left: 4.796397e-04	ci right 1.838264e-03	k: 10	n:10000
LMX1B   10000 perm   2 sec   (6063 perm/sec)   p_kst 1.000000e-03   p_cons 3.280000e-02   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 1.561414e-01	ci left: 2.816027e-02	ci right 3.297749e-02	k: 610	n:20000
KS ci ratio: 9.503118e-01	ci left: 4.573361e-04	ci right 1.298826e-03	k: 16	n:20000
LMX1B   20000 perm   6 sec   (3519 perm/sec)   p_kst 8.000000e-04   p_cons 3.050000e-02   p_joint 0

Joint ci ratio: 3.919869e+00	ci left: 0	ci right 1.229551e-04	k: 0	n:30000
Cons ci ratio: 1.393472e-01	ci left: 2.390657e-02	ci right 2.751941e-02	k: 770	n:30000
KS ci ratio: 8.354264e-01	ci left: 4.333616e-04	ci right 1.069826e-03	k: 21	n:30000
LMX1B   30000 perm   8 sec   (3836 perm/sec)   p_kst 7.000000e-04   p_cons 2.566667e-02   p_joint 0

Joint ci ratio: 3.919902e+00	ci left: 0	ci right 9.221773e-05	k: 0	n:40000
Cons ci ratio: 1.212245e-01	ci left: 2.392868e-02	ci right 2.704073e-02	k: 1018	n:40000
KS ci ratio: 7.837452e-01	ci left: 3.844680e-04	ci right 8.926218e-04	k: 24	n:40000
LMX1B   40000 perm   10 sec   (4021 perm/sec)   p_kst 6.000000e-04   p_cons 2.545000e-02   p_joint 0

Joint ci ratio: 3.919922e+00	ci left: 0	ci right 7.377487e-05	k: 0	n:50000
Cons ci ratio: 1.075526e-01	ci left: 2.448638e-02	ci right 2.728903e-02	k: 1293	n:50000
KS ci ratio: 7.154689e-01	ci left: 3.884684e-04	ci right 8.328714e-04	k: 29	n:50000
LMX1B   50000 perm   12 sec   (4143 perm/sec)   p_kst 5.800000e-04   p_cons 2.586000e-02   p_joint 0

Joint ci ratio: 2.263138e+00	ci left: 4.036847e-06	ci right 1.204062e-04	k: 2	n:60000
Cons ci ratio: 9.833797e-02	ci left: 2.452983e-02	ci right 2.708298e-02	k: 1547	n:60000
KS ci ratio: 6.357013e-01	ci left: 4.342262e-04	ci right 8.498946e-04	k: 37	n:60000
LMX1B   60000 perm   14 sec   (4191 perm/sec)   p_kst 6.166667e-04   p_cons 2.578333e-02   p_joint 3.333333e-05

Joint ci ratio: 1.753002e+00	ci left: 1.556972e-05	ci right 1.463019e-04	k: 4	n:70000
Cons ci ratio: 9.109516e-02	ci left: 2.459619e-02	ci right 2.695762e-02	k: 1803	n:70000
KS ci ratio: 5.777784e-01	ci left: 4.689419e-04	ci right 8.601000e-04	k: 45	n:70000
LMX1B   70000 perm   17 sec   (4206 perm/sec)   p_kst 6.428571e-04   p_cons 2.575714e-02   p_joint 5.714286e-05

Joint ci ratio: 1.131515e+00	ci left: 6.864144e-05	ci right 2.460121e-04	k: 11	n:80000
Cons ci ratio: 8.626363e-02	ci left: 2.407597e-02	ci right 2.625865e-02	k: 2012	n:80000
KS ci ratio: 5.332610e-01	ci left: 4.962961e-04	ci right 8.664779e-04	k: 53	n:80000
LMX1B   80000 perm   19 sec   (4196 perm/sec)   p_kst 6.625000e-04   p_cons 2.515000e-02   p_joint 1.375000e-04

Joint ci ratio: 7.542870e-01	ci left: 1.887202e-04	ci right 4.232607e-04	k: 26	n:90000
Cons ci ratio: 8.132328e-02	ci left: 2.414224e-02	ci right 2.619963e-02	k: 2264	n:90000
KS ci ratio: 4.936980e-01	ci left: 5.282067e-04	ci right 8.830387e-04	k: 62	n:90000
LMX1B   90000 perm   22 sec   (4179 perm/sec)   p_kst 6.888889e-04   p_cons 2.515556e-02   p_joint 2.888889e-04

Joint ci ratio: 6.822684e-01	ci left: 2.188897e-04	ci right 4.517148e-04	k: 32	n:100000
Cons ci ratio: 7.700372e-02	ci left: 2.428643e-02	ci right 2.624124e-02	k: 2525	n:100000
KS ci ratio: 4.555198e-01	ci left: 5.722458e-04	ci right 9.177792e-04	k: 73	n:100000
LMX1B   100000 perm   24 sec   (4166 perm/sec)   p_kst 7.300000e-04   p_cons 2.525000e-02   p_joint 3.200000e-04

Joint ci ratio: 6.721675e-01	ci left: 2.065149e-04	ci right 4.212860e-04	k: 33	n:110000
Cons ci ratio: 7.371467e-02	ci left: 2.413894e-02	ci right 2.599531e-02	k: 2756	n:110000
KS ci ratio: 4.250175e-01	ci left: 6.091506e-04	ci right 9.453478e-04	k: 84	n:110000
LMX1B   110000 perm   27 sec   (4141 perm/sec)   p_kst 7.636364e-04   p_cons 2.505455e-02   p_joint 3.000000e-04

Joint ci ratio: 6.721764e-01	ci left: 1.893047e-04	ci right 3.861808e-04	k: 33	n:120000
Cons ci ratio: 7.026123e-02	ci left: 2.439426e-02	ci right 2.617879e-02	k: 3033	n:120000
KS ci ratio: 4.130476e-01	ci left: 5.956603e-04	ci right 9.126066e-04	k: 89	n:120000
LMX1B   120000 perm   29 sec   (4113 perm/sec)   p_kst 7.416667e-04   p_cons 2.527500e-02   p_joint 2.750000e-04

Joint ci ratio: 6.276058e-01	ci left: 2.068624e-04	ci right 4.011933e-04	k: 38	n:130000
Cons ci ratio: 6.760866e-02	ci left: 2.435477e-02	ci right 2.606650e-02	k: 3276	n:130000
KS ci ratio: 3.958290e-01	ci left: 6.051209e-04	ci right 9.101697e-04	k: 97	n:130000
LMX1B   130000 perm   32 sec   (4082 perm/sec)   p_kst 7.461538e-04   p_cons 2.520000e-02   p_joint 2.923077e-04

Joint ci ratio: 6.197157e-01	ci left: 1.980988e-04	ci right 3.807968e-04	k: 39	n:140000
Cons ci ratio: 6.541679e-02	ci left: 2.418846e-02	ci right 2.583129e-02	k: 3500	n:140000
KS ci ratio: 3.753204e-01	ci left: 6.328594e-04	ci right 9.313020e-04	k: 108	n:140000
LMX1B   140000 perm   35 sec   (4042 perm/sec)   p_kst 7.714286e-04   p_cons 2.500000e-02   p_joint 2.785714e-04

Joint ci ratio: 6.121154e-01	ci left: 1.905172e-04	ci right 3.631068e-04	k: 40	n:150000
Cons ci ratio: 6.345128e-02	ci left: 2.402542e-02	ci right 2.560635e-02	k: 3721	n:150000
KS ci ratio: 3.638209e-01	ci left: 6.330022e-04	ci right 9.201965e-04	k: 115	n:150000
LMX1B   150000 perm   37 sec   (4003 perm/sec)   p_kst 7.666667e-04   p_cons 2.480667e-02   p_joint 2.666667e-04

Joint ci ratio: 5.842751e-01	ci left: 1.998223e-04	ci right 3.691573e-04	k: 44	n:160000
Cons ci ratio: 6.151700e-02	ci left: 2.398808e-02	ci right 2.551671e-02	k: 3959	n:160000
KS ci ratio: 3.477046e-01	ci left: 6.560496e-04	ci right 9.375487e-04	k: 126	n:160000
LMX1B   160000 perm   40 sec   (3959 perm/sec)   p_kst 7.875000e-04   p_cons 2.474375e-02   p_joint 2.750000e-04

Joint ci ratio: 5.657217e-01	ci left: 2.031470e-04	ci right 3.676305e-04	k: 47	n:170000
Cons ci ratio: 5.975677e-02	ci left: 2.394998e-02	ci right 2.543100e-02	k: 4196	n:170000
KS ci ratio: 3.347722e-01	ci left: 6.712440e-04	ci right 9.462412e-04	k: 136	n:170000
LMX1B   170000 perm   43 sec   (3918 perm/sec)   p_kst 8.000000e-04   p_cons 2.468235e-02   p_joint 2.764706e-04

Joint ci ratio: 5.542932e-01	ci left: 2.013981e-04	ci right 3.598764e-04	k: 49	n:180000
Cons ci ratio: 5.806566e-02	ci left: 2.397691e-02	ci right 2.541623e-02	k: 4444	n:180000
KS ci ratio: 3.311707e-01	ci left: 6.492248e-04	ci right 9.117295e-04	k: 139	n:180000
LMX1B   180000 perm   47 sec   (3867 perm/sec)   p_kst 7.722222e-04   p_cons 2.468889e-02   p_joint 2.722222e-04

Joint ci ratio: 5.284948e-01	ci left: 2.135147e-04	ci right 3.708170e-04	k: 54	n:190000
Cons ci ratio: 5.640579e-02	ci left: 2.408978e-02	ci right 2.549319e-02	k: 4709	n:190000
KS ci ratio: 3.199395e-01	ci left: 6.633876e-04	ci right 9.206594e-04	k: 149	n:190000
LMX1B   190000 perm   50 sec   (3817 perm/sec)   p_kst 7.842105e-04   p_cons 2.478421e-02   p_joint 2.842105e-04

Joint ci ratio: 4.899204e-01	ci left: 2.420629e-04	ci right 4.030041e-04	k: 63	n:200000
Cons ci ratio: 5.492021e-02	ci left: 2.415736e-02	ci right 2.552646e-02	k: 4967	n:200000
KS ci ratio: 3.107518e-01	ci left: 6.716582e-04	ci right 9.231750e-04	k: 158	n:200000
LMX1B   200000 perm   54 sec   (3734 perm/sec)   p_kst 7.900000e-04   p_cons 2.483500e-02   p_joint 3.150000e-04

Joint ci ratio: 4.824417e-01	ci left: 2.388918e-04	ci right 3.944967e-04	k: 65	n:210000
Cons ci ratio: 5.358821e-02	ci left: 2.418134e-02	ci right 2.551753e-02	k: 5217	n:210000
KS ci ratio: 3.050509e-01	ci left: 6.660384e-04	ci right 9.099868e-04	k: 164	n:210000
LMX1B   210000 perm   57 sec   (3693 perm/sec)   p_kst 7.809524e-04   p_cons 2.484286e-02   p_joint 3.095238e-04

Joint ci ratio: 4.587241e-01	ci left: 2.560793e-04	ci right 4.121283e-04	k: 72	n:220000
Cons ci ratio: 5.227029e-02	ci left: 2.427531e-02	ci right 2.558270e-02	k: 5483	n:220000
KS ci ratio: 2.904489e-01	ci left: 7.072707e-04	ci right 9.516450e-04	k: 181	n:220000
LMX1B   220000 perm   60 sec   (3648 perm/sec)   p_kst 8.227273e-04   p_cons 2.492273e-02   p_joint 3.272727e-04

Joint ci ratio: 4.495796e-01	ci left: 2.564964e-04	ci right 4.087359e-04	k: 75	n:230000
Cons ci ratio: 5.098142e-02	ci left: 2.442158e-02	ci right 2.570347e-02	k: 5763	n:230000
KS ci ratio: 2.873115e-01	ci left: 6.926503e-04	ci right 9.289183e-04	k: 185	n:230000
LMX1B   230000 perm   64 sec   (3609 perm/sec)   p_kst 8.043478e-04   p_cons 2.505652e-02   p_joint 3.260870e-04

Joint ci ratio: 4.409609e-01	ci left: 2.569072e-04	ci right 4.055984e-04	k: 78	n:240000
Cons ci ratio: 4.986809e-02	ci left: 2.447371e-02	ci right 2.572947e-02	k: 6023	n:240000
KS ci ratio: 2.806024e-01	ci left: 6.986202e-04	ci right 9.303761e-04	k: 194	n:240000
LMX1B   240000 perm   67 sec   (3567 perm/sec)   p_kst 8.083333e-04   p_cons 2.509583e-02   p_joint 3.250000e-04

Joint ci ratio: 4.328197e-01	ci left: 2.573108e-04	ci right 4.026866e-04	k: 81	n:250000
Cons ci ratio: 4.881669e-02	ci left: 2.452984e-02	ci right 2.576120e-02	k: 6285	n:250000
KS ci ratio: 2.756982e-01	ci left: 6.967226e-04	ci right 9.231092e-04	k: 201	n:250000
LMX1B   250000 perm   71 sec   (3527 perm/sec)   p_kst 8.040000e-04   p_cons 2.514000e-02   p_joint 3.240000e-04

Joint ci ratio: 4.201970e-01	ci left: 2.645809e-04	ci right 4.084814e-04	k: 86	n:260000
Cons ci ratio: 4.788163e-02	ci left: 2.452870e-02	ci right 2.573576e-02	k: 6533	n:260000
KS ci ratio: 2.684834e-01	ci left: 7.093483e-04	ci right 9.327906e-04	k: 212	n:260000
LMX1B   260000 perm   75 sec   (3489 perm/sec)   p_kst 8.153846e-04   p_cons 2.512692e-02   p_joint 3.307692e-04

Joint ci ratio: 4.108576e-01	ci left: 2.680476e-04	ci right 4.097076e-04	k: 90	n:270000
Cons ci ratio: 4.698766e-02	ci left: 2.453884e-02	ci right 2.572324e-02	k: 6784	n:270000
KS ci ratio: 2.647811e-01	ci left: 7.038128e-04	ci right 9.219474e-04	k: 218	n:270000
LMX1B   270000 perm   78 sec   (3449 perm/sec)   p_kst 8.074074e-04   p_cons 2.512593e-02   p_joint 3.333333e-04

Joint ci ratio: 4.021146e-01	ci left: 2.712996e-04	ci right 4.108138e-04	k: 94	n:280000
Cons ci ratio: 4.608489e-02	ci left: 2.460847e-02	ci right 2.577281e-02	k: 7052	n:280000
KS ci ratio: 2.583705e-01	ci left: 7.153874e-04	ci right 9.308754e-04	k: 229	n:280000
LMX1B   280000 perm   82 sec   (3410 perm/sec)   p_kst 8.178571e-04   p_cons 2.518571e-02   p_joint 3.357143e-04

Joint ci ratio: 3.959122e-01	ci left: 2.712511e-04	ci right 4.080256e-04	k: 97	n:290000
Cons ci ratio: 4.073724e-02	ci left: 3.031071e-02	ci right 3.157455e-02	k: 8972	n:290000
KS ci ratio: 2.550660e-01	ci left: 7.100771e-04	ci right 9.207947e-04	k: 235	n:290000
LMX1B   290000 perm   86 sec   (3371 perm/sec)   p_kst 8.103448e-04   p_cons 3.093793e-02   p_joint 3.344828e-04

Joint ci ratio: 3.880712e-01	ci left: 2.742286e-04	ci right 4.090657e-04	k: 101	n:300000
Cons ci ratio: 4.003120e-02	ci left: 3.035296e-02	ci right 3.159612e-02	k: 9291	n:300000
KS ci ratio: 2.498272e-01	ci left: 7.176329e-04	ci right 9.255388e-04	k: 245	n:300000
LMX1B   300000 perm   90 sec   (3333 perm/sec)   p_kst 8.166667e-04   p_cons 3.097000e-02   p_joint 3.366667e-04

Joint ci ratio: 3.788947e-01	ci left: 2.799570e-04	ci right 4.135463e-04	k: 106	n:310000
Cons ci ratio: 3.935643e-02	ci left: 3.039905e-02	ci right 3.162264e-02	k: 9612	n:310000
KS ci ratio: 2.439466e-01	ci left: 7.307992e-04	ci right 9.367813e-04	k: 257	n:310000
LMX1B   310000 perm   94 sec   (3296 perm/sec)   p_kst 8.290323e-04   p_cons 3.100645e-02   p_joint 3.419355e-04

Joint ci ratio: 3.736925e-01	ci left: 2.796967e-04	ci right 4.108807e-04	k: 109	n:320000
Cons ci ratio: 3.874687e-02	ci left: 3.039290e-02	ci right 3.159687e-02	k: 9917	n:320000
KS ci ratio: 2.402503e-01	ci left: 7.314453e-04	ci right 9.340205e-04	k: 265	n:320000
LMX1B   320000 perm   98 sec   (3258 perm/sec)   p_kst 8.281250e-04   p_cons 3.099063e-02   p_joint 3.406250e-04

Joint ci ratio: 3.703418e-01	ci left: 2.767149e-04	ci right 4.050547e-04	k: 111	n:330000
Cons ci ratio: 3.815324e-02	ci left: 3.040527e-02	ci right 3.159087e-02	k: 10228	n:330000
KS ci ratio: 2.371507e-01	ci left: 7.292238e-04	ci right 9.281954e-04	k: 272	n:330000
LMX1B   330000 perm   103 sec   (3215 perm/sec)   p_kst 8.242424e-04   p_cons 3.099394e-02   p_joint 3.363636e-04

Joint ci ratio: 3.324216e-01	ci left: 3.410015e-04	ci right 4.795110e-04	k: 138	n:340000
Cons ci ratio: 3.755484e-02	ci left: 3.046659e-02	ci right 3.163554e-02	k: 10556	n:340000
KS ci ratio: 2.354337e-01	ci left: 7.188438e-04	ci right 9.133562e-04	k: 276	n:340000
LMX1B   340000 perm   107 sec   (3177 perm/sec)   p_kst 8.117647e-04   p_cons 3.104706e-02   p_joint 4.058824e-04

Joint ci ratio: 3.265990e-01	ci left: 3.443628e-04	ci right 4.812737e-04	k: 143	n:350000
Cons ci ratio: 3.702588e-02	ci left: 3.045658e-02	ci right 3.160834e-02	k: 10860	n:350000
KS ci ratio: 2.321059e-01	ci left: 7.198240e-04	ci right 9.114536e-04	k: 284	n:350000
LMX1B   350000 perm   112 sec   (3139 perm/sec)   p_kst 8.114286e-04   p_cons 3.102857e-02   p_joint 4.085714e-04

Joint ci ratio: 3.243553e-01	ci left: 3.398987e-04	ci right 4.739132e-04	k: 145	n:360000
Cons ci ratio: 3.650517e-02	ci left: 3.046927e-02	ci right 3.160497e-02	k: 11172	n:360000
KS ci ratio: 2.304953e-01	ci left: 7.102958e-04	ci right 8.978899e-04	k: 288	n:360000
LMX1B   360000 perm   116 sec   (3102 perm/sec)   p_kst 8.000000e-04   p_cons 3.103333e-02   p_joint 4.027778e-04

Joint ci ratio: 3.178882e-01	ci left: 3.456218e-04	ci right 4.786232e-04	k: 151	n:370000
Cons ci ratio: 3.599936e-02	ci left: 3.049209e-02	ci right 3.161257e-02	k: 11488	n:370000
KS ci ratio: 2.285279e-01	ci left: 7.038349e-04	ci right 8.879122e-04	k: 293	n:370000
LMX1B   370000 perm   121 sec   (3066 perm/sec)   p_kst 7.918919e-04   p_cons 3.104865e-02   p_joint 4.081081e-04

Joint ci ratio: 3.127850e-01	ci left: 3.486433e-04	ci right 4.802235e-04	k: 156	n:380000
Cons ci ratio: 3.552643e-02	ci left: 3.049295e-02	ci right 3.159843e-02	k: 11796	n:380000
KS ci ratio: 2.254807e-01	ci left: 7.051685e-04	ci right 8.867937e-04	k: 301	n:380000
LMX1B   380000 perm   125 sec   (3034 perm/sec)   p_kst 7.921053e-04   p_cons 3.104211e-02   p_joint 4.105263e-04

Joint ci ratio: 3.360782e-01	ci left: 2.902352e-04	ci right 4.097019e-04	k: 135	n:390000
Cons ci ratio: 3.507466e-02	ci left: 3.048876e-02	ci right 3.157976e-02	k: 12102	n:390000
KS ci ratio: 2.214823e-01	ci left: 7.137140e-04	ci right 8.938363e-04	k: 312	n:390000
LMX1B   390000 perm   130 sec   (3004 perm/sec)   p_kst 8.000000e-04   p_cons 3.103077e-02   p_joint 3.461538e-04

Joint ci ratio: 1.951705e-01	ci left: 9.091884e-04	ci right 1.108154e-03	k: 402	n:400000
Cons ci ratio: 3.465266e-02	ci left: 3.046256e-02	ci right 3.153924e-02	k: 12399	n:400000
KS ci ratio: 2.193901e-01	ci left: 7.100428e-04	ci right 8.873175e-04	k: 318	n:400000
LMX1B   400000 perm   135 sec   (2970 perm/sec)   p_kst 7.950000e-04   p_cons 3.099750e-02   p_joint 1.005000e-03

Joint ci ratio: 3.289017e-01	ci left: 2.894901e-04	ci right 4.055678e-04	k: 141	n:410000
Cons ci ratio: 3.421357e-02	ci left: 3.049335e-02	ci right 3.155719e-02	k: 12719	n:410000
KS ci ratio: 2.180284e-01	ci left: 7.019461e-04	ci right 8.759658e-04	k: 322	n:410000
LMX1B   410000 perm   139 sec   (2941 perm/sec)   p_kst 7.853659e-04   p_cons 3.102195e-02   p_joint 3.439024e-04

Joint ci ratio: 3.277507e-01	ci left: 2.847821e-04	ci right 3.984881e-04	k: 142	n:420000
Cons ci ratio: 3.380950e-02	ci left: 3.048969e-02	ci right 3.154060e-02	k: 13025	n:420000
KS ci ratio: 2.153775e-01	ci left: 7.032470e-04	ci right 8.751892e-04	k: 330	n:420000
LMX1B   420000 perm   144 sec   (2910 perm/sec)   p_kst 7.857143e-04   p_cons 3.101190e-02   p_joint 3.380952e-04

Joint ci ratio: 3.232605e-01	ci left: 2.867016e-04	ci right 3.992807e-04	k: 146	n:430000
Cons ci ratio: 3.340648e-02	ci left: 3.050934e-02	ci right 3.154815e-02	k: 13341	n:430000
KS ci ratio: 2.131358e-01	ci left: 7.022979e-04	ci right 8.719873e-04	k: 337	n:430000
LMX1B   430000 perm   149 sec   (2880 perm/sec)   p_kst 7.837209e-04   p_cons 3.102558e-02   p_joint 3.395349e-04

Joint ci ratio: 3.158270e-01	ci left: 2.948192e-04	ci right 4.073864e-04	k: 153	n:440000
Cons ci ratio: 3.300134e-02	ci left: 3.055748e-02	ci right 3.158507e-02	k: 13670	n:440000
KS ci ratio: 2.106574e-01	ci left: 7.035537e-04	ci right 8.713146e-04	k: 345	n:440000
LMX1B   440000 perm   154 sec   (2852 perm/sec)   p_kst 7.840909e-04   p_cons 3.106818e-02   p_joint 3.477273e-04

Joint ci ratio: 1.834776e-01	ci left: 9.203688e-04	ci right 1.108373e-03	k: 455	n:450000
Cons ci ratio: 3.265032e-02	ci left: 3.053080e-02	ci right 3.154637e-02	k: 13966	n:450000
KS ci ratio: 2.065193e-01	ci left: 7.174059e-04	ci right 8.846851e-04	k: 359	n:450000
LMX1B   450000 perm   159 sec   (2824 perm/sec)   p_kst 7.977778e-04   p_cons 3.103556e-02   p_joint 1.011111e-03

Joint ci ratio: 1.820859e-01	ci left: 9.148816e-04	ci right 1.100192e-03	k: 462	n:460000
Cons ci ratio: 3.227176e-02	ci left: 3.057651e-02	ci right 3.158159e-02	k: 14295	n:460000
KS ci ratio: 2.056652e-01	ci left: 7.079949e-04	ci right 8.723112e-04	k: 362	n:460000
LMX1B   460000 perm   165 sec   (2796 perm/sec)   p_kst 7.869565e-04   p_cons 3.107609e-02   p_joint 1.004348e-03

Joint ci ratio: 1.801509e-01	ci left: 9.157281e-04	ci right 1.099023e-03	k: 472	n:470000
Cons ci ratio: 3.192410e-02	ci left: 3.058656e-02	ci right 3.158094e-02	k: 14608	n:470000
KS ci ratio: 2.037106e-01	ci left: 7.070614e-04	ci right 8.694074e-04	k: 369	n:470000
LMX1B   470000 perm   170 sec   (2771 perm/sec)   p_kst 7.851064e-04   p_cons 3.108085e-02   p_joint 1.004255e-03

Joint ci ratio: 1.782762e-01	ci left: 9.165493e-04	ci right 1.097894e-03	k: 482	n:480000
Cons ci ratio: 3.160055e-02	ci left: 3.057144e-02	ci right 3.155507e-02	k: 14909	n:480000
KS ci ratio: 2.020792e-01	ci left: 7.041958e-04	ci right 8.644291e-04	k: 375	n:480000
LMX1B   480000 perm   175 sec   (2746 perm/sec)   p_kst 7.812500e-04   p_cons 3.106042e-02   p_joint 1.004167e-03

Joint ci ratio: 1.771799e-01	ci left: 9.095440e-04	ci right 1.088277e-03	k: 488	n:490000
Cons ci ratio: 3.129514e-02	ci left: 3.054078e-02	ci right 3.151376e-02	k: 15202	n:490000
KS ci ratio: 2.007494e-01	ci left: 6.995138e-04	ci right 8.575059e-04	k: 380	n:490000
LMX1B   490000 perm   180 sec   (2719 perm/sec)   p_kst 7.755102e-04   p_cons 3.102449e-02   p_joint 9.959184e-04

Joint ci ratio: 1.750447e-01	ci left: 9.142954e-04	ci right 1.091569e-03	k: 500	n:500000
Cons ci ratio: 3.096235e-02	ci left: 3.058087e-02	ci right 3.154458e-02	k: 15530	n:500000
KS ci ratio: 1.984193e-01	ci left: 7.026241e-04	ci right 8.592540e-04	k: 389	n:500000
LMX1B   500000 perm   185 sec   (2696 perm/sec)   p_kst 7.780000e-04   p_cons 3.106000e-02   p_joint 1.000000e-03

Joint ci ratio: 1.724809e-01	ci left: 9.245012e-04	ci right 1.100854e-03	k: 515	n:510000
Cons ci ratio: 3.064793e-02	ci left: 3.060386e-02	ci right 3.155834e-02	k: 15850	n:510000
KS ci ratio: 1.959229e-01	ci left: 7.074872e-04	ci right 8.629802e-04	k: 399	n:510000
LMX1B   510000 perm   191 sec   (2674 perm/sec)   p_kst 7.823529e-04   p_cons 3.107843e-02   p_joint 1.009804e-03

Joint ci ratio: 1.711595e-01	ci left: 9.214452e-04	ci right 1.095730e-03	k: 523	n:520000
Cons ci ratio: 3.035744e-02	ci left: 3.059739e-02	ci right 3.154246e-02	k: 16155	n:520000
KS ci ratio: 1.942309e-01	ci left: 7.066858e-04	ci right 8.605027e-04	k: 406	n:520000
LMX1B   520000 perm   196 sec   (2650 perm/sec)   p_kst 7.807692e-04   p_cons 3.106731e-02   p_joint 1.005769e-03

Joint ci ratio: 1.692324e-01	ci left: 9.257367e-04	ci right 1.098660e-03	k: 535	n:530000
Cons ci ratio: 3.007128e-02	ci left: 3.059870e-02	ci right 3.153474e-02	k: 16464	n:530000
KS ci ratio: 1.916577e-01	ci left: 7.131045e-04	ci right 8.660225e-04	k: 417	n:530000
LMX1B   530000 perm   202 sec   (2627 perm/sec)   p_kst 7.867925e-04   p_cons 3.106415e-02   p_joint 1.009434e-03

Joint ci ratio: 1.678294e-01	ci left: 9.245571e-04	ci right 1.095684e-03	k: 544	n:540000
Cons ci ratio: 2.979215e-02	ci left: 3.060183e-02	ci right 3.152913e-02	k: 16774	n:540000
KS ci ratio: 1.900729e-01	ci left: 7.122424e-04	ci right 8.635668e-04	k: 424	n:540000
LMX1B   540000 perm   207 sec   (2605 perm/sec)   p_kst 7.851852e-04   p_cons 3.106296e-02   p_joint 1.007407e-03

Joint ci ratio: 1.661608e-01	ci left: 9.269112e-04	ci right 1.096597e-03	k: 555	n:550000
Cons ci ratio: 2.952510e-02	ci left: 3.059587e-02	ci right 3.151454e-02	k: 17079	n:550000
KS ci ratio: 1.880916e-01	ci left: 7.148817e-04	ci right 8.650028e-04	k: 433	n:550000
LMX1B   550000 perm   213 sec   (2582 perm/sec)   p_kst 7.872727e-04   p_cons 3.105273e-02   p_joint 1.009091e-03

Joint ci ratio: 1.651251e-01	ci left: 9.223408e-04	ci right 1.090033e-03	k: 562	n:560000
Cons ci ratio: 2.926338e-02	ci left: 3.059370e-02	ci right 3.150402e-02	k: 17386	n:560000
KS ci ratio: 1.870179e-01	ci left: 7.106252e-04	ci right 8.589038e-04	k: 438	n:560000
LMX1B   560000 perm   219 sec   (2559 perm/sec)   p_kst 7.821429e-04   p_cons 3.104643e-02   p_joint 1.003571e-03

Joint ci ratio: 1.636779e-01	ci left: 9.229815e-04	ci right 1.089175e-03	k: 572	n:570000
Cons ci ratio: 2.900088e-02	ci left: 3.060731e-02	ci right 3.150974e-02	k: 17702	n:570000
KS ci ratio: 1.853368e-01	ci left: 7.115390e-04	ci right 8.585238e-04	k: 446	n:570000
LMX1B   570000 perm   225 sec   (2537 perm/sec)   p_kst 7.824561e-04   p_cons 3.105614e-02   p_joint 1.003509e-03

Joint ci ratio: 1.624075e-01	ci left: 9.219521e-04	ci right 1.086546e-03	k: 581	n:580000
Cons ci ratio: 2.875109e-02	ci left: 3.060851e-02	ci right 3.150307e-02	k: 18011	n:580000
KS ci ratio: 1.839025e-01	ci left: 7.107823e-04	ci right 8.563478e-04	k: 453	n:580000
LMX1B   580000 perm   231 sec   (2514 perm/sec)   p_kst 7.810345e-04   p_cons 3.105345e-02   p_joint 1.001724e-03

Joint ci ratio: 1.613030e-01	ci left: 9.193358e-04	ci right 1.082238e-03	k: 589	n:590000
Cons ci ratio: 2.851005e-02	ci left: 3.060466e-02	ci right 3.149148e-02	k: 18317	n:590000
KS ci ratio: 1.825011e-01	ci left: 7.100554e-04	ci right 8.542414e-04	k: 460	n:590000
LMX1B   590000 perm   237 sec   (2492 perm/sec)   p_kst 7.796610e-04   p_cons 3.104576e-02   p_joint 9.983051e-04

Joint ci ratio: 1.600868e-01	ci left: 9.184103e-04	ci right 1.079804e-03	k: 598	n:600000
Cons ci ratio: 2.826401e-02	ci left: 3.062413e-02	ci right 3.150374e-02	k: 18637	n:600000
KS ci ratio: 1.809379e-01	ci left: 7.109480e-04	ci right 8.539432e-04	k: 468	n:600000
LMX1B   600000 perm   243 sec   (2469 perm/sec)   p_kst 7.800000e-04   p_cons 3.106167e-02   p_joint 9.966667e-04

Joint ci ratio: 1.587670e-01	ci left: 9.190938e-04	ci right 1.079149e-03	k: 608	n:610000
Cons ci ratio: 2.803415e-02	ci left: 3.062183e-02	ci right 3.149411e-02	k: 18944	n:610000
KS ci ratio: 1.794141e-01	ci left: 7.118165e-04	ci right 8.536497e-04	k: 476	n:610000
LMX1B   610000 perm   249 sec   (2448 perm/sec)   p_kst 7.803279e-04   p_cons 3.105574e-02   p_joint 9.967213e-04

Joint ci ratio: 1.576068e-01	ci left: 9.182112e-04	ci right 1.076834e-03	k: 617	n:620000
Cons ci ratio: 2.779343e-02	ci left: 3.065488e-02	ci right 3.152048e-02	k: 19273	n:620000
KS ci ratio: 1.779283e-01	ci left: 7.126618e-04	ci right 8.533608e-04	k: 484	n:620000
LMX1B   620000 perm   256 sec   (2426 perm/sec)   p_kst 7.806452e-04   p_cons 3.108548e-02   p_joint 9.951613e-04

Joint ci ratio: 1.563469e-01	ci left: 9.188859e-04	ci right 1.076237e-03	k: 627	n:630000
Cons ci ratio: 2.758787e-02	ci left: 3.062384e-02	ci right 3.148207e-02	k: 19562	n:630000
KS ci ratio: 1.768380e-01	ci left: 7.104506e-04	ci right 8.497617e-04	k: 490	n:630000
LMX1B   630000 perm   262 sec   (2405 perm/sec)   p_kst 7.777778e-04   p_cons 3.105079e-02   p_joint 9.952381e-04

Joint ci ratio: 1.554831e-01	ci left: 9.150390e-04	ci right 1.070785e-03	k: 634	n:640000
Cons ci ratio: 2.735979e-02	ci left: 3.065278e-02	ci right 3.150460e-02	k: 19889	n:640000
KS ci ratio: 1.761226e-01	ci left: 7.053235e-04	ci right 8.430102e-04	k: 494	n:640000
LMX1B   640000 perm   268 sec   (2384 perm/sec)   p_kst 7.718750e-04   p_cons 3.107656e-02   p_joint 9.906250e-04

Joint ci ratio: 1.543930e-01	ci left: 9.142707e-04	ci right 1.068694e-03	k: 643	n:650000
Cons ci ratio: 2.714212e-02	ci left: 3.067015e-02	ci right 3.151557e-02	k: 20209	n:650000
KS ci ratio: 1.754158e-01	ci left: 7.003553e-04	ci right 8.364653e-04	k: 498	n:650000
LMX1B   650000 perm   275 sec   (2364 perm/sec)   p_kst 7.661538e-04   p_cons 3.109077e-02   p_joint 9.892308e-04

Joint ci ratio: 1.095897e-01	ci left: 1.828791e-03	ci right 2.042285e-03	k: 1276	n:660000
Cons ci ratio: 2.695126e-02	ci left: 3.063886e-02	ci right 3.147738e-02	k: 20497	n:660000
KS ci ratio: 1.738548e-01	ci left: 7.027843e-04	ci right 8.380233e-04	k: 507	n:660000
LMX1B   660000 perm   282 sec   (2344 perm/sec)   p_kst 7.681818e-04   p_cons 3.105606e-02   p_joint 1.933333e-03

Joint ci ratio: 1.089098e-01	ci left: 1.824723e-03	ci right 2.036337e-03	k: 1292	n:670000
Cons ci ratio: 2.674577e-02	ci left: 3.065004e-02	ci right 3.148238e-02	k: 20813	n:670000
KS ci ratio: 1.730058e-01	ci left: 6.994336e-04	ci right 8.333020e-04	k: 512	n:670000
LMX1B   670000 perm   288 sec   (2324 perm/sec)   p_kst 7.641791e-04   p_cons 3.106418e-02   p_joint 1.928358e-03

Joint ci ratio: 1.084085e-01	ci left: 1.815056e-03	ci right 2.024518e-03	k: 1304	n:680000
Cons ci ratio: 2.655660e-02	ci left: 3.063462e-02	ci right 3.146056e-02	k: 21111	n:680000
KS ci ratio: 1.720031e-01	ci left: 6.975903e-04	ci right 8.302518e-04	k: 518	n:680000
LMX1B   680000 perm   295 sec   (2305 perm/sec)   p_kst 7.617647e-04   p_cons 3.104559e-02   p_joint 1.917647e-03

Joint ci ratio: 1.077502e-01	ci left: 1.811312e-03	ci right 2.018992e-03	k: 1320	n:690000
Cons ci ratio: 2.636884e-02	ci left: 3.062542e-02	ci right 3.144519e-02	k: 21413	n:690000
KS ci ratio: 1.710176e-01	ci left: 6.958027e-04	ci right 8.272878e-04	k: 524	n:690000
LMX1B   690000 perm   302 sec   (2286 perm/sec)   p_kst 7.594203e-04   p_cons 3.103333e-02   p_joint 1.913043e-03

Joint ci ratio: 1.069037e-01	ci left: 1.814631e-03	ci right 2.020954e-03	k: 1341	n:700000
Cons ci ratio: 2.618998e-02	ci left: 3.060515e-02	ci right 3.141874e-02	k: 21707	n:700000
KS ci ratio: 1.700489e-01	ci left: 6.940682e-04	ci right 8.244064e-04	k: 530	n:700000
LMX1B   700000 perm   309 sec   (2267 perm/sec)   p_kst 7.571429e-04   p_cons 3.101000e-02   p_joint 1.915714e-03

Joint ci ratio: 1.060379e-01	ci left: 1.819234e-03	ci right 2.024300e-03	k: 1363	n:710000
Cons ci ratio: 2.601045e-02	ci left: 3.059527e-02	ci right 3.140293e-02	k: 22008	n:710000
KS ci ratio: 1.687821e-01	ci left: 6.950824e-04	ci right 8.245399e-04	k: 538	n:710000
LMX1B   710000 perm   316 sec   (2248 perm/sec)   p_kst 7.577465e-04   p_cons 3.099718e-02   p_joint 1.919718e-03

Joint ci ratio: 1.050031e-01	ci left: 1.830478e-03	ci right 2.034674e-03	k: 1390	n:720000
Cons ci ratio: 2.582679e-02	ci left: 3.060362e-02	ci right 3.140572e-02	k: 22322	n:720000
KS ci ratio: 1.678507e-01	ci left: 6.934108e-04	ci right 8.217721e-04	k: 544	n:720000
LMX1B   720000 perm   323 sec   (2230 perm/sec)   p_kst 7.555556e-04   p_cons 3.100278e-02   p_joint 1.930556e-03

Joint ci ratio: 1.045910e-01	ci left: 1.820076e-03	ci right 2.022265e-03	k: 1401	n:730000
Cons ci ratio: 2.564697e-02	ci left: 3.061176e-02	ci right 3.140841e-02	k: 22636	n:730000
KS ci ratio: 1.672385e-01	ci left: 6.891615e-04	ci right 8.162241e-04	k: 548	n:730000
LMX1B   730000 perm   330 sec   (2211 perm/sec)   p_kst 7.506849e-04   p_cons 3.100822e-02   p_joint 1.919178e-03

Joint ci ratio: 1.038528e-01	ci left: 1.821803e-03	ci right 2.022669e-03	k: 1421	n:740000
Cons ci ratio: 2.546113e-02	ci left: 3.064253e-02	ci right 3.143412e-02	k: 22967	n:740000
KS ci ratio: 1.655874e-01	ci left: 6.940945e-04	ci right 8.206772e-04	k: 559	n:740000
LMX1B   740000 perm   337 sec   (2194 perm/sec)   p_kst 7.554054e-04   p_cons 3.103649e-02   p_joint 1.920270e-03

Joint ci ratio: 1.031659e-01	ci left: 1.822190e-03	ci right 2.021689e-03	k: 1440	n:750000
Cons ci ratio: 2.529551e-02	ci left: 3.063408e-02	ci right 3.142022e-02	k: 23269	n:750000
KS ci ratio: 1.642725e-01	ci left: 6.963447e-04	ci right 8.222297e-04	k: 568	n:750000
LMX1B   750000 perm   345 sec   (2176 perm/sec)   p_kst 7.573333e-04   p_cons 3.102533e-02   p_joint 1.920000e-03

Joint ci ratio: 1.025628e-01	ci left: 1.820006e-03	ci right 2.018031e-03	k: 1457	n:760000
Cons ci ratio: 2.511990e-02	ci left: 3.065724e-02	ci right 3.143844e-02	k: 23595	n:760000
KS ci ratio: 1.629884e-01	ci left: 6.985395e-04	ci right 8.237374e-04	k: 577	n:760000
LMX1B   760000 perm   352 sec   (2159 perm/sec)   p_kst 7.592105e-04   p_cons 3.104605e-02   p_joint 1.917105e-03

Joint ci ratio: 1.018665e-01	ci left: 1.821680e-03	ci right 2.018461e-03	k: 1477	n:770000
Cons ci ratio: 2.495974e-02	ci left: 3.065143e-02	ci right 3.142743e-02	k: 23899	n:770000
KS ci ratio: 1.615962e-01	ci left: 7.019272e-04	ci right 8.265534e-04	k: 587	n:770000
LMX1B   770000 perm   360 sec   (2141 perm/sec)   p_kst 7.623377e-04   p_cons 3.103766e-02   p_joint 1.918182e-03

Joint ci ratio: 1.013878e-01	ci left: 1.815817e-03	ci right 2.010988e-03	k: 1491	n:780000
Cons ci ratio: 2.481001e-02	ci left: 3.062794e-02	ci right 3.139862e-02	k: 24189	n:780000
KS ci ratio: 1.607782e-01	ci left: 7.003101e-04	ci right 8.239589e-04	k: 593	n:780000
LMX1B   780000 perm   367 sec   (2124 perm/sec)   p_kst 7.602564e-04   p_cons 3.101154e-02   p_joint 1.911538e-03

Joint ci ratio: 1.006150e-01	ci left: 1.821211e-03	ci right 2.015382e-03	k: 1514	n:790000
Cons ci ratio: 2.463958e-02	ci left: 3.066168e-02	ci right 3.142784e-02	k: 24524	n:790000
KS ci ratio: 1.595737e-01	ci left: 7.023812e-04	ci right 8.253777e-04	k: 602	n:790000
LMX1B   790000 perm   375 sec   (2108 perm/sec)   p_kst 7.620253e-04   p_cons 3.104304e-02   p_joint 1.916456e-03

Joint ci ratio: 1.001208e-01	ci left: 1.816725e-03	ci right 2.009410e-03	k: 1529	n:800000
Cons ci ratio: 2.449652e-02	ci left: 3.063619e-02	ci right 3.139721e-02	k: 24812	n:800000
KS ci ratio: 1.586555e-01	ci left: 7.020031e-04	ci right 8.241586e-04	k: 609	n:800000
LMX1B   800000 perm   383 sec   (2091 perm/sec)   p_kst 7.612500e-04   p_cons 3.101500e-02   p_joint 1.911250e-03

Joint ci ratio: 9.940849e-02	ci left: 1.820779e-03	ci right 2.012440e-03	k: 1551	n:810000
Cons ci ratio: 2.435092e-02	ci left: 3.062362e-02	ci right 3.137974e-02	k: 25110	n:810000
KS ci ratio: 1.573706e-01	ci left: 7.051940e-04	ci right 8.268171e-04	k: 619	n:810000
LMX1B   810000 perm   390 sec   (2075 perm/sec)   p_kst 7.641975e-04   p_cons 3.100000e-02   p_joint 1.914815e-03

Joint ci ratio: 9.858572e-02	ci left: 1.829497e-03	ci right 2.020390e-03	k: 1577	n:820000
Cons ci ratio: 2.419512e-02	ci left: 3.064289e-02	ci right 3.139458e-02	k: 25434	n:820000
KS ci ratio: 1.562406e-01	ci left: 7.071391e-04	ci right 8.281398e-04	k: 628	n:820000
LMX1B   820000 perm   398 sec   (2059 perm/sec)   p_kst 7.658537e-04   p_cons 3.101707e-02   p_joint 1.923171e-03

Joint ci ratio: 9.796680e-02	ci left: 1.830959e-03	ci right 2.020736e-03	k: 1597	n:830000
Cons ci ratio: 2.403986e-02	ci left: 3.066770e-02	ci right 3.141510e-02	k: 25763	n:830000
KS ci ratio: 1.553785e-01	ci left: 7.067242e-04	ci right 8.269246e-04	k: 635	n:830000
LMX1B   830000 perm   406 sec   (2043 perm/sec)   p_kst 7.650602e-04   p_cons 3.103976e-02   p_joint 1.924096e-03

Joint ci ratio: 9.717903e-02	ci left: 1.839360e-03	ci right 2.028387e-03	k: 1623	n:840000
Cons ci ratio: 2.388471e-02	ci left: 3.069903e-02	ci right 3.144230e-02	k: 26098	n:840000
KS ci ratio: 1.538139e-01	ci left: 7.131885e-04	ci right 8.331544e-04	k: 648	n:840000
LMX1B   840000 perm   414 sec   (2029 perm/sec)   p_kst 7.714286e-04   p_cons 3.106905e-02   p_joint 1.932143e-03

Joint ci ratio: 9.685206e-02	ci left: 1.830347e-03	ci right 2.017779e-03	k: 1634	n:850000
Cons ci ratio: 2.374784e-02	ci left: 3.069104e-02	ci right 3.142980e-02	k: 26400	n:850000
KS ci ratio: 1.532251e-01	ci left: 7.104544e-04	ci right 8.294608e-04	k: 653	n:850000
LMX1B   850000 perm   422 sec   (2013 perm/sec)   p_kst 7.682353e-04   p_cons 3.105882e-02   p_joint 1.922353e-03

Joint ci ratio: 9.609066e-02	ci left: 1.838567e-03	ci right 2.025278e-03	k: 1660	n:860000
Cons ci ratio: 2.361740e-02	ci left: 3.067285e-02	ci right 3.140706e-02	k: 26693	n:860000
KS ci ratio: 1.517240e-01	ci left: 7.167330e-04	ci right 8.355083e-04	k: 666	n:860000
LMX1B   860000 perm   430 sec   (1998 perm/sec)   p_kst 7.744186e-04   p_cons 3.103837e-02   p_joint 1.930233e-03

Joint ci ratio: 9.563136e-02	ci left: 1.835384e-03	ci right 2.020831e-03	k: 1676	n:870000
Cons ci ratio: 2.348414e-02	ci left: 3.066765e-02	ci right 3.139754e-02	k: 26997	n:870000
KS ci ratio: 1.510464e-01	ci left: 7.151300e-04	ci right 8.330624e-04	k: 672	n:870000
LMX1B   870000 perm   439 sec   (1983 perm/sec)   p_kst 7.724138e-04   p_cons 3.103103e-02   p_joint 1.926437e-03

Joint ci ratio: 9.492610e-02	ci left: 1.842260e-03	ci right 2.026952e-03	k: 1701	n:880000
Cons ci ratio: 2.333769e-02	ci left: 3.070214e-02	ci right 3.142823e-02	k: 27336	n:880000
KS ci ratio: 1.498266e-01	ci left: 7.190331e-04	ci right 8.365658e-04	k: 683	n:880000
LMX1B   880000 perm   447 sec   (1969 perm/sec)   p_kst 7.761364e-04   p_cons 3.106364e-02   p_joint 1.932955e-03

Joint ci ratio: 9.440067e-02	ci left: 1.842403e-03	ci right 2.026031e-03	k: 1720	n:890000
Cons ci ratio: 2.321515e-02	ci left: 3.068111e-02	ci right 3.140285e-02	k: 27626	n:890000
KS ci ratio: 1.488504e-01	ci left: 7.206886e-04	ci right 8.376561e-04	k: 692	n:890000
LMX1B   890000 perm   455 sec   (1956 perm/sec)   p_kst 7.775281e-04   p_cons 3.104045e-02   p_joint 1.932584e-03

Joint ci ratio: 9.399218e-02	ci left: 1.838206e-03	ci right 2.020579e-03	k: 1735	n:900000
Cons ci ratio: 2.308728e-02	ci left: 3.067934e-02	ci right 3.139701e-02	k: 27933	n:900000
KS ci ratio: 1.482103e-01	ci left: 7.190998e-04	ci right 8.352631e-04	k: 698	n:900000
LMX1B   900000 perm   464 sec   (1941 perm/sec)   p_kst 7.755556e-04   p_cons 3.103667e-02   p_joint 1.927778e-03

Joint ci ratio: 1.039814e-01	ci left: 1.478241e-03	ci right 1.641441e-03	k: 1418	n:910000
Cons ci ratio: 2.297031e-02	ci left: 3.065468e-02	ci right 3.136809e-02	k: 28219	n:910000
KS ci ratio: 1.478937e-01	ci left: 7.143721e-04	ci right 8.295033e-04	k: 701	n:910000
LMX1B   910000 perm   472 sec   (1928 perm/sec)   p_kst 7.703297e-04   p_cons 3.100989e-02   p_joint 1.558242e-03

Joint ci ratio: 1.035810e-01	ci left: 1.473820e-03	ci right 1.635866e-03	k: 1429	n:920000
Cons ci ratio: 2.284228e-02	ci left: 3.066407e-02	ci right 3.137367e-02	k: 28536	n:920000
KS ci ratio: 1.473700e-01	ci left: 7.118411e-04	ci right 8.261225e-04	k: 706	n:920000
LMX1B   920000 perm   480 sec   (1915 perm/sec)   p_kst 7.673913e-04   p_cons 3.101739e-02   p_joint 1.553261e-03

Joint ci ratio: 1.027929e-01	ci left: 1.481018e-03	ci right 1.642542e-03	k: 1451	n:930000
Cons ci ratio: 2.271678e-02	ci left: 3.067220e-02	ci right 3.137804e-02	k: 28852	n:930000
KS ci ratio: 1.463386e-01	ci left: 7.145446e-04	ci right 8.283868e-04	k: 716	n:930000
LMX1B   930000 perm   489 sec   (1902 perm/sec)   p_kst 7.698925e-04   p_cons 3.102366e-02   p_joint 1.560215e-03

Joint ci ratio: 9.189841e-02	ci left: 1.843113e-03	ci right 2.021680e-03	k: 1815	n:940000
Cons ci ratio: 2.259652e-02	ci left: 3.067170e-02	ci right 3.137374e-02	k: 29160	n:940000
KS ci ratio: 1.453284e-01	ci left: 7.171932e-04	ci right 8.306003e-04	k: 726	n:940000
LMX1B   940000 perm   497 sec   (1890 perm/sec)   p_kst 7.723404e-04   p_cons 3.102128e-02   p_joint 1.930851e-03

Joint ci ratio: 9.147138e-02	ci left: 1.841196e-03	ci right 2.018705e-03	k: 1832	n:950000
Cons ci ratio: 2.248209e-02	ci left: 3.066076e-02	ci right 3.135895e-02	k: 29458	n:950000
KS ci ratio: 1.446339e-01	ci left: 7.167450e-04	ci right 8.294927e-04	k: 733	n:950000
LMX1B   950000 perm   506 sec   (1878 perm/sec)   p_kst 7.715789e-04   p_cons 3.100842e-02   p_joint 1.928421e-03

Joint ci ratio: 9.097637e-02	ci left: 1.842375e-03	ci right 2.018985e-03	k: 1852	n:960000
Cons ci ratio: 2.235775e-02	ci left: 3.068113e-02	ci right 3.137587e-02	k: 29786	n:960000
KS ci ratio: 1.442416e-01	ci left: 7.132949e-04	ci right 8.251694e-04	k: 737	n:960000
LMX1B   960000 perm   514 sec   (1866 perm/sec)   p_kst 7.677083e-04   p_cons 3.102708e-02   p_joint 1.929167e-03

Joint ci ratio: 9.034444e-02	ci left: 1.849578e-03	ci right 2.025582e-03	k: 1878	n:970000
Cons ci ratio: 2.223888e-02	ci left: 3.069186e-02	ci right 3.138310e-02	k: 30105	n:970000
KS ci ratio: 1.428922e-01	ci left: 7.198561e-04	ci right 8.316134e-04	k: 751	n:970000
LMX1B   970000 perm   523 sec   (1854 perm/sec)   p_kst 7.742268e-04   p_cons 3.103608e-02   p_joint 1.936082e-03

Joint ci ratio: 8.993861e-02	ci left: 1.847661e-03	ci right 2.022651e-03	k: 1895	n:980000
Cons ci ratio: 2.212376e-02	ci left: 3.069731e-02	ci right 3.138505e-02	k: 30419	n:980000
KS ci ratio: 1.421381e-01	ci left: 7.203828e-04	ci right 8.315817e-04	k: 759	n:980000
LMX1B   980000 perm   532 sec   (1842 perm/sec)   p_kst 7.744898e-04   p_cons 3.103980e-02   p_joint 1.933673e-03

Joint ci ratio: 8.967922e-02	ci left: 1.839859e-03	ci right 2.013581e-03	k: 1906	n:990000
Cons ci ratio: 2.201337e-02	ci left: 3.069462e-02	ci right 3.137883e-02	k: 30725	n:990000
KS ci ratio: 1.415805e-01	ci left: 7.189517e-04	ci right 8.294575e-04	k: 765	n:990000
LMX1B   990000 perm   541 sec   (1831 perm/sec)   p_kst 7.727273e-04   p_cons 3.103535e-02   p_joint 1.925253e-03

Joint ci ratio: 8.935207e-02	ci left: 1.835147e-03	ci right 2.007759e-03	k: 1920	n:1000000
Cons ci ratio: 2.191118e-02	ci left: 3.067409e-02	ci right 3.135463e-02	k: 31013	n:1000000
KS ci ratio: 1.410293e-01	ci left: 7.175500e-04	ci right 8.273749e-04	k: 771	n:1000000
LMX1B   1000000 perm   550 sec   (1819 perm/sec)   p_kst 7.710000e-04   p_cons 3.101300e-02   p_joint 1.920000e-03

Joint ci ratio: 8.893642e-02	ci left: 1.834401e-03	ci right 2.006099e-03	k: 1938	n:1010000
Cons ci ratio: 2.180285e-02	ci left: 3.067466e-02	ci right 3.135180e-02	k: 31322	n:1010000
KS ci ratio: 1.399456e-01	ci left: 7.219092e-04	ci right 8.314815e-04	k: 783	n:1010000
LMX1B   1010000 perm   559 sec   (1807 perm/sec)   p_kst 7.752475e-04   p_cons 3.101188e-02   p_joint 1.918812e-03

Joint ci ratio: 8.845862e-02	ci left: 1.836549e-03	ci right 2.007476e-03	k: 1959	n:1020000
Cons ci ratio: 2.168868e-02	ci left: 3.069570e-02	ci right 3.136971e-02	k: 31652	n:1020000
KS ci ratio: 1.393250e-01	ci left: 7.214547e-04	ci right 8.304321e-04	k: 790	n:1020000
LMX1B   1020000 perm   568 sec   (1796 perm/sec)   p_kst 7.745098e-04   p_cons 3.103137e-02   p_joint 1.920588e-03

Joint ci ratio: 8.814460e-02	ci left: 1.832010e-03	ci right 2.001878e-03	k: 1973	n:1030000
Cons ci ratio: 2.158255e-02	ci left: 3.069896e-02	ci right 3.136970e-02	k: 31964	n:1030000
KS ci ratio: 1.388870e-01	ci left: 7.191356e-04	ci right 8.273929e-04	k: 795	n:1030000
LMX1B   1030000 perm   577 sec   (1785 perm/sec)   p_kst 7.718447e-04   p_cons 3.103301e-02   p_joint 1.915534e-03

Joint ci ratio: 8.761340e-02	ci left: 1.836965e-03	ci right 2.006213e-03	k: 1997	n:1040000
Cons ci ratio: 2.147110e-02	ci left: 3.072129e-02	ci right 3.138902e-02	k: 32296	n:1040000
KS ci ratio: 1.380225e-01	ci left: 7.215032e-04	ci right 8.293854e-04	k: 805	n:1040000
LMX1B   1040000 perm   586 sec   (1773 perm/sec)   p_kst 7.740385e-04   p_cons 3.105385e-02   p_joint 1.920192e-03

Joint ci ratio: 8.719978e-02	ci left: 1.837169e-03	ci right 2.005597e-03	k: 2016	n:1050000
Cons ci ratio: 2.136948e-02	ci left: 3.072047e-02	ci right 3.138498e-02	k: 32604	n:1050000
KS ci ratio: 1.371740e-01	ci left: 7.238278e-04	ci right 8.313378e-04	k: 815	n:1050000
LMX1B   1050000 perm   596 sec   (1762 perm/sec)   p_kst 7.761905e-04   p_cons 3.105143e-02   p_joint 1.920000e-03

Joint ci ratio: 8.683470e-02	ci left: 1.835526e-03	ci right 2.003063e-03	k: 2033	n:1060000
Cons ci ratio: 2.127028e-02	ci left: 3.071686e-02	ci right 3.137816e-02	k: 32909	n:1060000
KS ci ratio: 1.365065e-01	ci left: 7.242880e-04	ci right 8.313004e-04	k: 823	n:1060000
LMX1B   1060000 perm   605 sec   (1751 perm/sec)   p_kst 7.764151e-04   p_cons 3.104623e-02   p_joint 1.917925e-03

Joint ci ratio: 8.645306e-02	ci left: 1.834830e-03	ci right 2.001530e-03	k: 2051	n:1070000
Cons ci ratio: 2.116917e-02	ci left: 3.072261e-02	ci right 3.138086e-02	k: 33224	n:1070000
KS ci ratio: 1.358486e-01	ci left: 7.247409e-04	ci right 8.312624e-04	k: 831	n:1070000
LMX1B   1070000 perm   615 sec   (1740 perm/sec)   p_kst 7.766355e-04   p_cons 3.105047e-02   p_joint 1.916822e-03

Joint ci ratio: 8.597243e-02	ci left: 1.838678e-03	ci right 2.004752e-03	k: 2074	n:1080000
Cons ci ratio: 2.106980e-02	ci left: 3.072735e-02	ci right 3.138257e-02	k: 33538	n:1080000
KS ci ratio: 1.355235e-01	ci left: 7.216083e-04	ci right 8.273950e-04	k: 835	n:1080000
LMX1B   1080000 perm   624 sec   (1730 perm/sec)   p_kst 7.731481e-04   p_cons 3.105370e-02   p_joint 1.920370e-03

Joint ci ratio: 8.547933e-02	ci left: 1.843356e-03	ci right 2.008850e-03	k: 2098	n:1090000
Cons ci ratio: 2.097087e-02	ci left: 3.073475e-02	ci right 3.138701e-02	k: 33855	n:1090000
KS ci ratio: 1.349597e-01	ci left: 7.211927e-04	ci right 8.264434e-04	k: 842	n:1090000
LMX1B   1090000 perm   634 sec   (1719 perm/sec)   p_kst 7.724771e-04   p_cons 3.105963e-02   p_joint 1.924771e-03

Joint ci ratio: 8.501467e-02	ci left: 1.847062e-03	ci right 2.011942e-03	k: 2121	n:1100000
Cons ci ratio: 2.087237e-02	ci left: 3.074473e-02	ci right 3.139411e-02	k: 34175	n:1100000
KS ci ratio: 1.345614e-01	ci left: 7.190286e-04	ci right 8.236290e-04	k: 847	n:1100000
LMX1B   1100000 perm   644 sec   (1708 perm/sec)   p_kst 7.700000e-04   p_cons 3.106818e-02   p_joint 1.928182e-03

Joint ci ratio: 8.465643e-02	ci left: 1.846293e-03	ci right 2.010377e-03	k: 2139	n:1110000
Cons ci ratio: 2.078177e-02	ci left: 3.073572e-02	ci right 3.138205e-02	k: 34474	n:1110000
KS ci ratio: 1.340095e-01	ci left: 7.186453e-04	ci right 8.227269e-04	k: 854	n:1110000
LMX1B   1110000 perm   654 sec   (1698 perm/sec)   p_kst 7.693694e-04   p_cons 3.105766e-02   p_joint 1.927027e-03

Joint ci ratio: 8.422450e-02	ci left: 1.849037e-03	ci right 2.012485e-03	k: 2161	n:1120000
Cons ci ratio: 2.067210e-02	ci left: 3.078550e-02	ci right 3.142943e-02	k: 34839	n:1120000
KS ci ratio: 1.335418e-01	ci left: 7.174066e-04	ci right 8.209175e-04	k: 860	n:1120000
LMX1B   1120000 perm   664 sec   (1687 perm/sec)   p_kst 7.678571e-04   p_cons 3.110625e-02   p_joint 1.929464e-03

Joint ci ratio: 8.387611e-02	ci left: 1.848268e-03	ci right 2.010939e-03	k: 2179	n:1130000
Cons ci ratio: 2.058529e-02	ci left: 3.077278e-02	ci right 3.141370e-02	k: 35134	n:1130000
KS ci ratio: 1.328492e-01	ci left: 7.187571e-04	ci right 8.218826e-04	k: 869	n:1130000
LMX1B   1130000 perm   674 sec   (1677 perm/sec)   p_kst 7.690265e-04   p_cons 3.109204e-02   p_joint 1.928319e-03

Joint ci ratio: 8.336119e-02	ci left: 1.855244e-03	ci right 2.017478e-03	k: 2206	n:1140000
Cons ci ratio: 2.049091e-02	ci left: 3.078559e-02	ci right 3.142381e-02	k: 35458	n:1140000
KS ci ratio: 1.319421e-01	ci left: 7.226300e-04	ci right 8.255477e-04	k: 881	n:1140000
LMX1B   1140000 perm   684 sec   (1667 perm/sec)   p_kst 7.728070e-04   p_cons 3.110351e-02   p_joint 1.935088e-03

Joint ci ratio: 8.296734e-02	ci left: 1.856993e-03	ci right 2.018575e-03	k: 2227	n:1150000
Cons ci ratio: 2.040458e-02	ci left: 3.077829e-02	ci right 3.141364e-02	k: 35759	n:1150000
KS ci ratio: 1.312740e-01	ci left: 7.239147e-04	ci right 8.264526e-04	k: 890	n:1150000
LMX1B   1150000 perm   694 sec   (1657 perm/sec)   p_kst 7.739130e-04   p_cons 3.109478e-02   p_joint 1.936522e-03

Joint ci ratio: 8.256063e-02	ci left: 1.859558e-03	ci right 2.020532e-03	k: 2249	n:1160000
Cons ci ratio: 2.031788e-02	ci left: 3.077541e-02	ci right 3.140797e-02	k: 36065	n:1160000
KS ci ratio: 1.306159e-01	ci left: 7.251786e-04	ci right 8.273406e-04	k: 899	n:1160000
LMX1B   1160000 perm   704 sec   (1647 perm/sec)   p_kst 7.750000e-04   p_cons 3.109052e-02   p_joint 1.938793e-03

Joint ci ratio: 8.221425e-02	ci left: 1.859569e-03	ci right 2.019836e-03	k: 2268	n:1170000
Cons ci ratio: 2.023428e-02	ci left: 3.076663e-02	ci right 3.139638e-02	k: 36364	n:1170000
KS ci ratio: 1.300392e-01	ci left: 7.255952e-04	ci right 8.273297e-04	k: 907	n:1170000
LMX1B   1170000 perm   715 sec   (1637 perm/sec)   p_kst 7.752137e-04   p_cons 3.108034e-02   p_joint 1.938462e-03

Joint ci ratio: 8.189012e-02	ci left: 1.858751e-03	ci right 2.018286e-03	k: 2286	n:1180000
Cons ci ratio: 2.014236e-02	ci left: 3.078584e-02	ci right 3.141308e-02	k: 36696	n:1180000
KS ci ratio: 1.296118e-01	ci left: 7.243656e-04	ci right 8.255683e-04	k: 913	n:1180000
LMX1B   1180000 perm   725 sec   (1627 perm/sec)   p_kst 7.737288e-04   p_cons 3.109831e-02   p_joint 1.937288e-03

Joint ci ratio: 8.149898e-02	ci left: 1.861241e-03	ci right 2.020191e-03	k: 2308	n:1190000
Cons ci ratio: 2.005475e-02	ci left: 3.079553e-02	ci right 3.142020e-02	k: 37017	n:1190000
KS ci ratio: 1.289783e-01	ci left: 7.255970e-04	ci right 8.264382e-04	k: 922	n:1190000
LMX1B   1190000 perm   736 sec   (1618 perm/sec)   p_kst 7.747899e-04   p_cons 3.110672e-02   p_joint 1.939496e-03

Joint ci ratio: 8.130583e-02	ci left: 1.854710e-03	ci right 2.012709e-03	k: 2319	n:1200000
Cons ci ratio: 1.997158e-02	ci left: 3.079511e-02	ci right 3.141716e-02	k: 37326	n:1200000
KS ci ratio: 1.287694e-01	ci left: 7.219696e-04	ci right 8.221319e-04	k: 925	n:1200000
LMX1B   1200000 perm   746 sec   (1608 perm/sec)   p_kst 7.708333e-04   p_cons 3.110500e-02   p_joint 1.932500e-03

Joint ci ratio: 8.099228e-02	ci left: 1.853956e-03	ci right 2.011253e-03	k: 2337	n:1210000
Cons ci ratio: 1.989245e-02	ci left: 3.078566e-02	ci right 3.140502e-02	k: 37624	n:1210000
KS ci ratio: 1.283544e-01	ci left: 7.208021e-04	ci right 8.204555e-04	k: 931	n:1210000
LMX1B   1210000 perm   757 sec   (1599 perm/sec)   p_kst 7.694215e-04   p_cons 3.109421e-02   p_joint 1.931405e-03

Joint ci ratio: 8.066519e-02	ci left: 1.854019e-03	ci right 2.010656e-03	k: 2356	n:1220000
Cons ci ratio: 1.981101e-02	ci left: 3.078615e-02	ci right 3.140296e-02	k: 37934	n:1220000
KS ci ratio: 1.278751e-01	ci left: 7.204477e-04	ci right 8.196520e-04	k: 938	n:1220000
LMX1B   1220000 perm   767 sec   (1590 perm/sec)   p_kst 7.688525e-04   p_cons 3.109344e-02   p_joint 1.931148e-03

Joint ci ratio: 8.030817e-02	ci left: 1.855675e-03	ci right 2.011726e-03	k: 2377	n:1230000
Cons ci ratio: 1.972604e-02	ci left: 3.080040e-02	ci right 3.141482e-02	k: 38261	n:1230000
KS ci ratio: 1.272666e-01	ci left: 7.216740e-04	ci right 8.205386e-04	k: 947	n:1230000
LMX1B   1230000 perm   778 sec   (1581 perm/sec)   p_kst 7.699187e-04   p_cons 3.110650e-02   p_joint 1.932520e-03

Joint ci ratio: 7.997255e-02	ci left: 1.856516e-03	ci right 2.011954e-03	k: 2397	n:1240000
Cons ci ratio: 1.964426e-02	ci left: 3.080800e-02	ci right 3.142000e-02	k: 38580	n:1240000
KS ci ratio: 1.266005e-01	ci left: 7.236626e-04	ci right 8.222417e-04	k: 957	n:1240000
LMX1B   1240000 perm   789 sec   (1571 perm/sec)   p_kst 7.717742e-04   p_cons 3.111290e-02   p_joint 1.933065e-03

Joint ci ratio: 7.960813e-02	ci left: 1.858913e-03	ci right 2.013810e-03	k: 2419	n:1250000
Cons ci ratio: 1.956841e-02	ci left: 3.080036e-02	ci right 3.140981e-02	k: 38880	n:1250000
KS ci ratio: 1.259447e-01	ci left: 7.256206e-04	ci right 8.239163e-04	k: 967	n:1250000
LMX1B   1250000 perm   800 sec   (1563 perm/sec)   p_kst 7.736000e-04   p_cons 3.110400e-02   p_joint 1.935200e-03

Joint ci ratio: 7.923238e-02	ci left: 1.862051e-03	ci right 2.016443e-03	k: 2442	n:1260000
Cons ci ratio: 1.949575e-02	ci left: 3.078574e-02	ci right 3.139261e-02	k: 39171	n:1260000
KS ci ratio: 1.254918e-01	ci left: 7.252425e-04	ci right 8.231075e-04	k: 974	n:1260000
LMX1B   1260000 perm   811 sec   (1554 perm/sec)   p_kst 7.730159e-04   p_cons 3.108810e-02   p_joint 1.938095e-03

Joint ci ratio: 7.899039e-02	ci left: 1.858966e-03	ci right 2.012611e-03	k: 2457	n:1270000
Cons ci ratio: 1.941450e-02	ci left: 3.080034e-02	ci right 3.140495e-02	k: 39499	n:1270000
KS ci ratio: 1.252995e-01	ci left: 7.218200e-04	ci right 8.190627e-04	k: 977	n:1270000
LMX1B   1270000 perm   822 sec   (1545 perm/sec)   p_kst 7.692913e-04   p_cons 3.110157e-02   p_joint 1.934646e-03

Joint ci ratio: 7.870279e-02	ci left: 1.858228e-03	ci right 2.011227e-03	k: 2475	n:1280000
Cons ci ratio: 1.933953e-02	ci left: 3.079840e-02	ci right 3.140060e-02	k: 39806	n:1280000
KS ci ratio: 1.249805e-01	ci left: 7.199647e-04	ci right 8.166923e-04	k: 982	n:1280000
LMX1B   1280000 perm   833 sec   (1536 perm/sec)   p_kst 7.671875e-04   p_cons 3.109844e-02   p_joint 1.933594e-03

Joint ci ratio: 7.848139e-02	ci left: 1.854463e-03	ci right 2.006702e-03	k: 2489	n:1290000
Cons ci ratio: 1.926591e-02	ci left: 3.079494e-02	ci right 3.139476e-02	k: 40111	n:1290000
KS ci ratio: 1.247272e-01	ci left: 7.173875e-04	ci right 8.135590e-04	k: 986	n:1290000
LMX1B   1290000 perm   844 sec   (1528 perm/sec)   p_kst 7.643411e-04   p_cons 3.109380e-02   p_joint 1.929457e-03

Joint ci ratio: 7.816807e-02	ci left: 1.855281e-03	ci right 2.006952e-03	k: 2509	n:1300000
Cons ci ratio: 1.919410e-02	ci left: 3.078848e-02	ci right 3.138592e-02	k: 40412	n:1300000
KS ci ratio: 1.244126e-01	ci left: 7.155954e-04	ci right 8.112668e-04	k: 991	n:1300000
LMX1B   1300000 perm   856 sec   (1519 perm/sec)   p_kst 7.623077e-04   p_cons 3.108615e-02   p_joint 1.930000e-03

Joint ci ratio: 7.790476e-02	ci left: 1.853842e-03	ci right 2.004862e-03	k: 2526	n:1310000
Cons ci ratio: 1.911413e-02	ci left: 3.081024e-02	ci right 3.140558e-02	k: 40750	n:1310000
KS ci ratio: 1.237901e-01	ci left: 7.175295e-04	ci right 8.129443e-04	k: 1001	n:1310000
LMX1B   1310000 perm   868 sec   (1509 perm/sec)   p_kst 7.641221e-04   p_cons 3.110687e-02   p_joint 1.928244e-03

Joint ci ratio: 7.761354e-02	ci left: 1.853912e-03	ci right 2.004347e-03	k: 2545	n:1320000
Cons ci ratio: 1.904544e-02	ci left: 3.079924e-02	ci right 3.139221e-02	k: 41045	n:1320000
KS ci ratio: 1.232988e-01	ci left: 7.179669e-04	ci right 8.130335e-04	k: 1009	n:1320000
LMX1B   1320000 perm   879 sec   (1501 perm/sec)   p_kst 7.643939e-04   p_cons 3.109470e-02   p_joint 1.928030e-03

Joint ci ratio: 7.741633e-02	ci left: 1.849558e-03	ci right 1.999241e-03	k: 2558	n:1330000
Cons ci ratio: 1.897985e-02	ci left: 3.078093e-02	ci right 3.137149e-02	k: 41330	n:1330000
KS ci ratio: 1.228738e-01	ci left: 7.176698e-04	ci right 8.123456e-04	k: 1016	n:1330000
LMX1B   1330000 perm   891 sec   (1493 perm/sec)   p_kst 7.639098e-04   p_cons 3.107519e-02   p_joint 1.923308e-03

Joint ci ratio: 7.714552e-02	ci left: 1.848928e-03	ci right 1.998014e-03	k: 2576	n:1340000
Cons ci ratio: 1.891025e-02	ci left: 3.077776e-02	ci right 3.136606e-02	k: 41635	n:1340000
KS ci ratio: 1.223336e-01	ci left: 7.188245e-04	ci right 8.132056e-04	k: 1025	n:1340000
LMX1B   1340000 perm   902 sec   (1485 perm/sec)   p_kst 7.649254e-04   p_cons 3.107090e-02   p_joint 1.922388e-03

Joint ci ratio: 7.690723e-02	ci left: 1.846856e-03	ci right 1.995294e-03	k: 2592	n:1350000
Cons ci ratio: 1.883909e-02	ci left: 3.078201e-02	ci right 3.136815e-02	k: 41950	n:1350000
KS ci ratio: 1.220960e-01	ci left: 7.163722e-04	ci right 8.102354e-04	k: 1029	n:1350000
LMX1B   1350000 perm   914 sec   (1477 perm/sec)   p_kst 7.622222e-04   p_cons 3.107407e-02   p_joint 1.920000e-03

Joint ci ratio: 7.655363e-02	ci left: 1.850585e-03	ci right 1.998608e-03	k: 2616	n:1360000
Cons ci ratio: 1.877491e-02	ci left: 3.076644e-02	ci right 3.135027e-02	k: 42238	n:1360000
KS ci ratio: 1.215075e-01	ci left: 7.182337e-04	ci right 8.118546e-04	k: 1039	n:1360000
LMX1B   1360000 perm   926 sec   (1469 perm/sec)   p_kst 7.639706e-04   p_cons 3.105735e-02   p_joint 1.923529e-03

Joint ci ratio: 7.637892e-02	ci left: 1.845668e-03	ci right 1.992946e-03	k: 2628	n:1370000
Cons ci ratio: 1.870799e-02	ci left: 3.076199e-02	ci right 3.134364e-02	k: 42541	n:1370000
KS ci ratio: 1.211007e-01	ci left: 7.179456e-04	ci right 8.111931e-04	k: 1046	n:1370000
LMX1B   1370000 perm   938 sec   (1461 perm/sec)   p_kst 7.635036e-04   p_cons 3.105182e-02   p_joint 1.918248e-03

Joint ci ratio: 7.610441e-02	ci left: 1.845800e-03	ci right 1.992535e-03	k: 2647	n:1380000
Cons ci ratio: 1.864155e-02	ci left: 3.075834e-02	ci right 3.133783e-02	k: 42845	n:1380000
KS ci ratio: 1.206979e-01	ci left: 7.176621e-04	ci right 8.105407e-04	k: 1053	n:1380000
LMX1B   1380000 perm   949 sec   (1453 perm/sec)   p_kst 7.630435e-04   p_cons 3.104710e-02   p_joint 1.918116e-03

Joint ci ratio: 7.579015e-02	ci left: 1.848047e-03	ci right 1.994328e-03	k: 2669	n:1390000
Cons ci ratio: 1.857670e-02	ci left: 3.075188e-02	ci right 3.132921e-02	k: 43145	n:1390000
KS ci ratio: 1.200728e-01	ci left: 7.201745e-04	ci right 8.128613e-04	k: 1064	n:1390000
LMX1B   1390000 perm   961 sec   (1446 perm/sec)   p_kst 7.654676e-04   p_cons 3.103957e-02   p_joint 1.920144e-03

Joint ci ratio: 7.557826e-02	ci left: 1.845358e-03	ci right 1.991000e-03	k: 2684	n:1400000
Cons ci ratio: 1.851406e-02	ci left: 3.074054e-02	ci right 3.131569e-02	k: 43438	n:1400000
KS ci ratio: 1.197921e-01	ci left: 7.184947e-04	ci right 8.107337e-04	k: 1069	n:1400000
LMX1B   1400000 perm   974 sec   (1438 perm/sec)   p_kst 7.635714e-04   p_cons 3.102714e-02   p_joint 1.917143e-03

Joint ci ratio: 7.524260e-02	ci left: 1.848971e-03	ci right 1.994222e-03	k: 2708	n:1410000
Cons ci ratio: 1.844792e-02	ci left: 3.074278e-02	ci right 3.131589e-02	k: 43750	n:1410000
KS ci ratio: 1.193467e-01	ci left: 7.189030e-04	ci right 8.108272e-04	k: 1077	n:1410000
LMX1B   1410000 perm   986 sec   (1430 perm/sec)   p_kst 7.638298e-04   p_cons 3.102837e-02   p_joint 1.920567e-03

Joint ci ratio: 7.498013e-02	ci left: 1.849079e-03	ci right 1.993809e-03	k: 2727	n:1420000
Cons ci ratio: 1.838355e-02	ci left: 3.074148e-02	ci right 3.131255e-02	k: 44057	n:1420000
KS ci ratio: 1.189063e-01	ci left: 7.193063e-04	ci right 8.109187e-04	k: 1085	n:1420000
LMX1B   1420000 perm   998 sec   (1423 perm/sec)   p_kst 7.640845e-04   p_cons 3.102606e-02   p_joint 1.920423e-03

Joint ci ratio: 7.477494e-02	ci left: 1.846442e-03	ci right 1.990553e-03	k: 2742	n:1430000
Cons ci ratio: 1.832220e-02	ci left: 3.073254e-02	ci right 3.130152e-02	k: 44353	n:1430000
KS ci ratio: 1.185250e-01	ci left: 7.190259e-04	ci right 8.102883e-04	k: 1092	n:1430000
LMX1B   1430000 perm   1010 sec   (1416 perm/sec)   p_kst 7.636364e-04   p_cons 3.101608e-02   p_joint 1.917483e-03

Joint ci ratio: 7.447680e-02	ci left: 1.848612e-03	ci right 1.992292e-03	k: 2764	n:1440000
Cons ci ratio: 1.825029e-02	ci left: 3.076038e-02	ci right 3.132762e-02	k: 44702	n:1440000
KS ci ratio: 1.178794e-01	ci left: 7.221197e-04	ci right 8.132409e-04	k: 1104	n:1440000
LMX1B   1440000 perm   1022 sec   (1409 perm/sec)   p_kst 7.666667e-04   p_cons 3.104306e-02   p_joint 1.919444e-03

Joint ci ratio: 7.416886e-02	ci left: 1.851430e-03	ci right 1.994709e-03	k: 2787	n:1450000
Cons ci ratio: 1.818275e-02	ci left: 3.077617e-02	ci right 3.134157e-02	k: 45034	n:1450000
KS ci ratio: 1.175079e-01	ci left: 7.218250e-04	ci right 8.126020e-04	k: 1111	n:1450000
LMX1B   1450000 perm   1035 sec   (1401 perm/sec)   p_kst 7.662069e-04   p_cons 3.105793e-02   p_joint 1.922069e-03

Joint ci ratio: 7.378586e-02	ci left: 1.858245e-03	ci right 2.001277e-03	k: 2816	n:1460000
Cons ci ratio: 1.811843e-02	ci left: 3.078355e-02	ci right 3.134707e-02	k: 45354	n:1460000
KS ci ratio: 1.168267e-01	ci left: 7.255242e-04	ci right 8.162010e-04	k: 1124	n:1460000
LMX1B   1460000 perm   1047 sec   (1394 perm/sec)   p_kst 7.698630e-04   p_cons 3.106438e-02   p_joint 1.928767e-03

Joint ci ratio: 7.342165e-02	ci left: 1.864301e-03	ci right 2.007060e-03	k: 2844	n:1470000
Cons ci ratio: 1.805581e-02	ci left: 3.078746e-02	ci right 3.134908e-02	k: 45669	n:1470000
KS ci ratio: 1.161063e-01	ci left: 7.298352e-04	ci right 8.204497e-04	k: 1138	n:1470000
LMX1B   1470000 perm   1060 sec   (1387 perm/sec)   p_kst 7.741497e-04   p_cons 3.106735e-02   p_joint 1.934694e-03

Joint ci ratio: 7.321614e-02	ci left: 1.862317e-03	ci right 2.004508e-03	k: 2860	n:1480000
Cons ci ratio: 1.800010e-02	ci left: 3.077046e-02	ci right 3.133002e-02	k: 45953	n:1480000
KS ci ratio: 1.158524e-01	ci left: 7.281842e-04	ci right 8.183825e-04	k: 1143	n:1480000
LMX1B   1480000 perm   1072 sec   (1381 perm/sec)   p_kst 7.722973e-04   p_cons 3.104932e-02   p_joint 1.932432e-03

Joint ci ratio: 7.288554e-02	ci left: 1.866949e-03	ci right 2.008823e-03	k: 2886	n:1490000
Cons ci ratio: 1.793470e-02	ci left: 3.078777e-02	ci right 3.134560e-02	k: 46288	n:1490000
KS ci ratio: 1.151000e-01	ci left: 7.330735e-04	ci right 8.232476e-04	k: 1158	n:1490000
LMX1B   1490000 perm   1084 sec   (1374 perm/sec)   p_kst 7.771812e-04   p_cons 3.106577e-02   p_joint 1.936913e-03

Joint ci ratio: 7.268449e-02	ci left: 1.864976e-03	ci right 2.006292e-03	k: 2902	n:1500000
Cons ci ratio: 1.787257e-02	ci left: 3.079623e-02	ci right 3.135225e-02	k: 46610	n:1500000
KS ci ratio: 1.146065e-01	ci left: 7.346615e-04	ci right 8.246174e-04	k: 1168	n:1500000
LMX1B   1500000 perm   1097 sec   (1367 perm/sec)   p_kst 7.786667e-04   p_cons 3.107333e-02   p_joint 1.934667e-03

Joint ci ratio: 7.238578e-02	ci left: 1.868231e-03	ci right 2.009187e-03	k: 2926	n:1510000
Cons ci ratio: 1.781226e-02	ci left: 3.080062e-02	ci right 3.135483e-02	k: 46926	n:1510000
KS ci ratio: 1.143136e-01	ci left: 7.336559e-04	ci right 8.232436e-04	k: 1174	n:1510000
LMX1B   1510000 perm   1110 sec   (1361 perm/sec)   p_kst 7.774834e-04   p_cons 3.107682e-02   p_joint 1.937748e-03

Joint ci ratio: 7.218882e-02	ci left: 1.866276e-03	ci right 2.006686e-03	k: 2942	n:1520000
Cons ci ratio: 1.775178e-02	ci left: 3.080757e-02	ci right 3.136001e-02	k: 47246	n:1520000
KS ci ratio: 1.141197e-01	ci left: 7.313856e-04	ci right 8.205343e-04	k: 1178	n:1520000
LMX1B   1520000 perm   1123 sec   (1354 perm/sec)   p_kst 7.750000e-04   p_cons 3.108289e-02   p_joint 1.935526e-03

Joint ci ratio: 7.189615e-02	ci left: 1.869482e-03	ci right 2.009539e-03	k: 2966	n:1530000
Cons ci ratio: 1.769499e-02	ci left: 3.080403e-02	ci right 3.135461e-02	k: 47550	n:1530000
KS ci ratio: 1.134955e-01	ci left: 7.348602e-04	ci right 8.239097e-04	k: 1191	n:1530000
LMX1B   1530000 perm   1136 sec   (1347 perm/sec)   p_kst 7.784314e-04   p_cons 3.107843e-02   p_joint 1.938562e-03

Joint ci ratio: 7.157106e-02	ci left: 1.874560e-03	ci right 2.014336e-03	k: 2993	n:1540000
Cons ci ratio: 1.763360e-02	ci left: 3.081799e-02	ci right 3.136689e-02	k: 47881	n:1540000
KS ci ratio: 1.131165e-01	ci left: 7.351360e-04	ci right 8.239016e-04	k: 1199	n:1540000
LMX1B   1540000 perm   1149 sec   (1341 perm/sec)   p_kst 7.785714e-04   p_cons 3.109156e-02   p_joint 1.943506e-03

Joint ci ratio: 7.126216e-02	ci left: 1.878941e-03	ci right 2.018414e-03	k: 3019	n:1550000
Cons ci ratio: 1.757774e-02	ci left: 3.081507e-02	ci right 3.136217e-02	k: 48186	n:1550000
KS ci ratio: 1.126015e-01	ci left: 7.372897e-04	ci right 8.258831e-04	k: 1210	n:1550000
LMX1B   1550000 perm   1162 sec   (1334 perm/sec)   p_kst 7.806452e-04   p_cons 3.108774e-02   p_joint 1.947742e-03

Joint ci ratio: 7.100394e-02	ci left: 1.880748e-03	ci right 2.019829e-03	k: 3041	n:1560000
Cons ci ratio: 1.751905e-02	ci left: 3.082368e-02	ci right 3.136909e-02	k: 48509	n:1560000
KS ci ratio: 1.120934e-01	ci left: 7.394166e-04	ci right 8.278383e-04	k: 1221	n:1560000
LMX1B   1560000 perm   1175 sec   (1328 perm/sec)   p_kst 7.826923e-04   p_cons 3.109551e-02   p_joint 1.949359e-03

Joint ci ratio: 8.440437e-02	ci left: 1.314055e-03	ci right 1.430472e-03	k: 2153	n:1570000
Cons ci ratio: 1.746372e-02	ci left: 3.082267e-02	ci right 3.136632e-02	k: 48817	n:1570000
KS ci ratio: 1.117283e-01	ci left: 7.396599e-04	ci right 8.278035e-04	k: 1229	n:1570000
LMX1B   1570000 perm   1188 sec   (1322 perm/sec)   p_kst 7.828025e-04   p_cons 3.109363e-02   p_joint 1.371338e-03

Joint ci ratio: 8.401507e-02	ci left: 1.318130e-03	ci right 1.434343e-03	k: 2173	n:1580000
Cons ci ratio: 1.740433e-02	ci left: 3.083744e-02	ci right 3.137947e-02	k: 49150	n:1580000
KS ci ratio: 1.115925e-01	ci left: 7.368242e-04	ci right 8.245161e-04	k: 1232	n:1580000
LMX1B   1580000 perm   1201 sec   (1315 perm/sec)   p_kst 7.797468e-04   p_cons 3.110759e-02   p_joint 1.375316e-03

Joint ci ratio: 1.491994e-01	ci left: 4.015829e-04	ci right 4.669258e-04	k: 689	n:1590000
Cons ci ratio: 1.734826e-02	ci left: 3.084262e-02	ci right 3.138299e-02	k: 49468	n:1590000
KS ci ratio: 1.111874e-01	ci left: 7.376927e-04	ci right 8.251484e-04	k: 1241	n:1590000
LMX1B   1590000 perm   1214 sec   (1309 perm/sec)   p_kst 7.805031e-04   p_cons 3.111195e-02   p_joint 4.333333e-04

Joint ci ratio: 1.485548e-01	ci left: 4.026833e-04	ci right 4.678971e-04	k: 695	n:1600000
Cons ci ratio: 1.729309e-02	ci left: 3.084650e-02	ci right 3.138520e-02	k: 49784	n:1600000
KS ci ratio: 1.105217e-01	ci left: 7.421973e-04	ci right 8.296260e-04	k: 1256	n:1600000
LMX1B   1600000 perm   1228 sec   (1303 perm/sec)   p_kst 7.850000e-04   p_cons 3.111500e-02   p_joint 4.343750e-04

Joint ci ratio: 1.483420e-01	ci left: 4.013783e-04	ci right 4.662793e-04	k: 697	n:1610000
Cons ci ratio: 1.724431e-02	ci left: 3.082992e-02	ci right 3.136680e-02	k: 50067	n:1610000
KS ci ratio: 1.103027e-01	ci left: 7.406072e-04	ci right 8.276644e-04	k: 1261	n:1610000
LMX1B   1610000 perm   1241 sec   (1297 perm/sec)   p_kst 7.832298e-04   p_cons 3.109752e-02   p_joint 4.329193e-04

Joint ci ratio: 1.479188e-01	ci left: 4.012783e-04	ci right 4.659616e-04	k: 701	n:1620000
Cons ci ratio: 1.718853e-02	ci left: 3.083937e-02	ci right 3.137465e-02	k: 50392	n:1620000
KS ci ratio: 1.099547e-01	ci left: 7.408378e-04	ci right 8.276296e-04	k: 1269	n:1620000
LMX1B   1620000 perm   1254 sec   (1291 perm/sec)   p_kst 7.833333e-04   p_cons 3.110617e-02   p_joint 4.327160e-04

Joint ci ratio: 1.477086e-01	ci left: 3.999980e-04	ci right 4.643753e-04	k: 703	n:1630000
Cons ci ratio: 1.713678e-02	ci left: 3.083648e-02	ci right 3.137009e-02	k: 50697	n:1630000
KS ci ratio: 1.098684e-01	ci left: 7.374860e-04	ci right 8.238129e-04	k: 1271	n:1630000
LMX1B   1630000 perm   1268 sec   (1285 perm/sec)   p_kst 7.797546e-04   p_cons 3.110245e-02   p_joint 4.312883e-04

Joint ci ratio: 1.474993e-01	ci left: 3.987335e-04	ci right 4.628083e-04	k: 705	n:1640000
Cons ci ratio: 1.708239e-02	ci left: 3.084457e-02	ci right 3.137660e-02	k: 51020	n:1640000
KS ci ratio: 1.094817e-01	ci left: 7.383264e-04	ci right 8.244279e-04	k: 1280	n:1640000
LMX1B   1640000 perm   1282 sec   (1279 perm/sec)   p_kst 7.804878e-04   p_cons 3.110976e-02   p_joint 4.298780e-04

Joint ci ratio: 1.469798e-01	ci left: 3.992356e-04	ci right 4.631453e-04	k: 710	n:1650000
Cons ci ratio: 1.703193e-02	ci left: 3.084048e-02	ci right 3.137086e-02	k: 51323	n:1650000
KS ci ratio: 1.091839e-01	ci left: 7.379781e-04	ci right 8.237898e-04	k: 1287	n:1650000
LMX1B   1650000 perm   1296 sec   (1273 perm/sec)   p_kst 7.800000e-04   p_cons 3.110485e-02   p_joint 4.303030e-04

Joint ci ratio: 1.463634e-01	ci left: 4.003124e-04	ci right 4.641022e-04	k: 716	n:1660000
Cons ci ratio: 1.698702e-02	ci left: 3.081845e-02	ci right 3.134704e-02	k: 51596	n:1660000
KS ci ratio: 1.090571e-01	ci left: 7.352903e-04	ci right 8.206838e-04	k: 1290	n:1660000
LMX1B   1660000 perm   1309 sec   (1268 perm/sec)   p_kst 7.771084e-04   p_cons 3.108193e-02   p_joint 4.313253e-04

Joint ci ratio: 6.867322e-02	ci left: 1.880420e-03	ci right 2.014730e-03	k: 3251	n:1670000
Cons ci ratio: 1.693757e-02	ci left: 3.081398e-02	ci right 3.134094e-02	k: 51898	n:1670000
KS ci ratio: 1.088466e-01	ci left: 7.337997e-04	ci right 8.188451e-04	k: 1295	n:1670000
LMX1B   1670000 perm   1323 sec   (1262 perm/sec)   p_kst 7.754491e-04   p_cons 3.107665e-02   p_joint 1.946707e-03

Joint ci ratio: 1.457550e-01	ci left: 3.989876e-04	ci right 4.622791e-04	k: 722	n:1680000
Cons ci ratio: 1.688604e-02	ci left: 3.081846e-02	ci right 3.134387e-02	k: 52215	n:1680000
KS ci ratio: 1.084706e-01	ci left: 7.346435e-04	ci right 8.194737e-04	k: 1304	n:1680000
LMX1B   1680000 perm   1337 sec   (1257 perm/sec)   p_kst 7.761905e-04   p_cons 3.108036e-02   p_joint 4.297619e-04

Joint ci ratio: 1.453534e-01	ci left: 3.989074e-04	ci right 4.619967e-04	k: 726	n:1690000
Cons ci ratio: 1.683300e-02	ci left: 3.082996e-02	ci right 3.135390e-02	k: 52544	n:1690000
KS ci ratio: 1.082221e-01	ci left: 7.337505e-04	ci right 8.182712e-04	k: 1310	n:1690000
LMX1B   1690000 perm   1351 sec   (1251 perm/sec)   p_kst 7.751479e-04   p_cons 3.109112e-02   p_joint 4.295858e-04

Joint ci ratio: 1.447572e-01	ci left: 3.999623e-04	ci right 4.629365e-04	k: 732	n:1700000
Cons ci ratio: 1.678292e-02	ci left: 3.083253e-02	ci right 3.135495e-02	k: 52858	n:1700000
KS ci ratio: 1.076894e-01	ci left: 7.368750e-04	ci right 8.213112e-04	k: 1323	n:1700000
LMX1B   1700000 perm   1365 sec   (1246 perm/sec)   p_kst 7.782353e-04   p_cons 3.109294e-02   p_joint 4.305882e-04

Joint ci ratio: 6.777247e-02	ci left: 1.886443e-03	ci right 2.019346e-03	k: 3338	n:1710000
Cons ci ratio: 1.673457e-02	ci left: 3.083042e-02	ci right 3.135128e-02	k: 53164	n:1710000
KS ci ratio: 1.074058e-01	ci left: 7.365492e-04	ci right 8.207119e-04	k: 1330	n:1710000
LMX1B   1710000 perm   1379 sec   (1240 perm/sec)   p_kst 7.777778e-04   p_cons 3.109006e-02   p_joint 1.952047e-03

Joint ci ratio: 6.755025e-02	ci left: 1.888050e-03	ci right 2.020613e-03	k: 3360	n:1720000
Cons ci ratio: 1.668246e-02	ci left: 3.084340e-02	ci right 3.136284e-02	k: 53496	n:1720000
KS ci ratio: 1.070845e-01	ci left: 7.367934e-04	ci right 8.207162e-04	k: 1338	n:1720000
LMX1B   1720000 perm   1393 sec   (1235 perm/sec)   p_kst 7.779070e-04   p_cons 3.110233e-02   p_joint 1.953488e-03

Joint ci ratio: 9.360496e-02	ci left: 9.653036e-04	ci right 1.060657e-03	k: 1751	n:1730000
Cons ci ratio: 1.663274e-02	ci left: 3.084931e-02	ci right 3.136729e-02	k: 53816	n:1730000
KS ci ratio: 1.066077e-01	ci left: 7.392856e-04	ci right 8.230938e-04	k: 1350	n:1730000
LMX1B   1730000 perm   1407 sec   (1229 perm/sec)   p_kst 7.803468e-04   p_cons 3.110751e-02   p_joint 1.012139e-03

Joint ci ratio: 6.719142e-02	ci left: 1.886689e-03	ci right 2.018426e-03	k: 3396	n:1740000
Cons ci ratio: 1.658616e-02	ci left: 3.084543e-02	ci right 3.136188e-02	k: 54119	n:1740000
KS ci ratio: 1.063718e-01	ci left: 7.383932e-04	ci right 8.219035e-04	k: 1356	n:1740000
LMX1B   1740000 perm   1422 sec   (1224 perm/sec)   p_kst 7.793103e-04   p_cons 3.110287e-02   p_joint 1.951724e-03

Joint ci ratio: 6.703381e-02	ci left: 1.884897e-03	ci right 2.016188e-03	k: 3412	n:1750000
Cons ci ratio: 1.654467e-02	ci left: 3.082452e-02	ci right 3.133932e-02	k: 54392	n:1750000
KS ci ratio: 1.061375e-01	ci left: 7.375113e-04	ci right 8.207266e-04	k: 1362	n:1750000
LMX1B   1750000 perm   1436 sec   (1219 perm/sec)   p_kst 7.782857e-04   p_cons 3.108114e-02   p_joint 1.949714e-03

Joint ci ratio: 6.682850e-02	ci left: 1.885920e-03	ci right 2.016864e-03	k: 3433	n:1760000
Cons ci ratio: 1.649477e-02	ci left: 3.083554e-02	ci right 3.134896e-02	k: 54721	n:1760000
KS ci ratio: 1.058274e-01	ci left: 7.377458e-04	ci right 8.207293e-04	k: 1370	n:1760000
LMX1B   1760000 perm   1450 sec   (1213 perm/sec)   p_kst 7.784091e-04   p_cons 3.109148e-02   p_joint 1.950568e-03

Joint ci ratio: 6.666374e-02	ci left: 1.884709e-03	ci right 2.015234e-03	k: 3450	n:1770000
Cons ci ratio: 1.644393e-02	ci left: 3.085151e-02	ci right 3.136359e-02	k: 55059	n:1770000
KS ci ratio: 1.056350e-01	ci left: 7.363279e-04	ci right 8.189919e-04	k: 1375	n:1770000
LMX1B   1770000 perm   1465 sec   (1208 perm/sec)   p_kst 7.768362e-04   p_cons 3.110678e-02   p_joint 1.949153e-03

Joint ci ratio: 6.650980e-02	ci left: 1.882960e-03	ci right 2.013051e-03	k: 3466	n:1780000
Cons ci ratio: 1.639601e-02	ci left: 3.085834e-02	ci right 3.136903e-02	k: 55381	n:1780000
KS ci ratio: 1.054055e-01	ci left: 7.354730e-04	ci right 8.178506e-04	k: 1381	n:1780000
LMX1B   1780000 perm   1480 sec   (1203 perm/sec)   p_kst 7.758427e-04   p_cons 3.111292e-02   p_joint 1.947191e-03

Joint ci ratio: 6.626169e-02	ci left: 1.886725e-03	ci right 2.016571e-03	k: 3492	n:1790000
Cons ci ratio: 1.634895e-02	ci left: 3.086343e-02	ci right 3.137272e-02	k: 55700	n:1790000
KS ci ratio: 1.048379e-01	ci left: 7.395239e-04	ci right 8.218816e-04	k: 1396	n:1790000
LMX1B   1790000 perm   1494 sec   (1198 perm/sec)   p_kst 7.798883e-04   p_cons 3.111732e-02   p_joint 1.950838e-03

Joint ci ratio: 6.615776e-02	ci left: 1.882253e-03	ci right 2.011580e-03	k: 3503	n:1800000
Cons ci ratio: 1.630500e-02	ci left: 3.085851e-02	ci right 3.136634e-02	k: 56001	n:1800000
KS ci ratio: 1.046882e-01	ci left: 7.375794e-04	ci right 8.195961e-04	k: 1400	n:1800000
LMX1B   1800000 perm   1509 sec   (1193 perm/sec)   p_kst 7.777778e-04   p_cons 3.111167e-02   p_joint 1.946111e-03

Joint ci ratio: 6.593226e-02	ci left: 1.884894e-03	ci right 2.013945e-03	k: 3527	n:1810000
Cons ci ratio: 1.625947e-02	ci left: 3.086079e-02	ci right 3.136723e-02	k: 56315	n:1810000
KS ci ratio: 1.044277e-01	ci left: 7.372706e-04	ci right 8.190364e-04	k: 1407	n:1810000
LMX1B   1810000 perm   1524 sec   (1188 perm/sec)   p_kst 7.773481e-04   p_cons 3.111326e-02   p_joint 1.948619e-03

Joint ci ratio: 6.577403e-02	ci left: 1.883724e-03	ci right 2.012374e-03	k: 3544	n:1820000
Cons ci ratio: 1.621358e-02	ci left: 3.086579e-02	ci right 3.137087e-02	k: 56634	n:1820000
KS ci ratio: 1.041323e-01	ci left: 7.375007e-04	ci right 8.190464e-04	k: 1415	n:1820000
LMX1B   1820000 perm   1539 sec   (1183 perm/sec)   p_kst 7.774725e-04   p_cons 3.111758e-02   p_joint 1.947253e-03

Joint ci ratio: 6.563540e-02	ci left: 1.881493e-03	ci right 2.009709e-03	k: 3559	n:1830000
Cons ci ratio: 1.617438e-02	ci left: 3.084733e-02	ci right 3.135087e-02	k: 56910	n:1830000
KS ci ratio: 1.040223e-01	ci left: 7.350672e-04	ci right 8.162528e-04	k: 1418	n:1830000
LMX1B   1830000 perm   1554 sec   (1178 perm/sec)   p_kst 7.748634e-04   p_cons 3.109836e-02   p_joint 1.944809e-03

Joint ci ratio: 6.547012e-02	ci left: 1.880890e-03	ci right 2.008730e-03	k: 3577	n:1840000
Cons ci ratio: 1.612891e-02	ci left: 3.085344e-02	ci right 3.135565e-02	k: 57231	n:1840000
KS ci ratio: 1.036939e-01	ci left: 7.358366e-04	ci right 8.168350e-04	k: 1427	n:1840000
LMX1B   1840000 perm   1569 sec   (1173 perm/sec)   p_kst 7.755435e-04   p_cons 3.110380e-02   p_joint 1.944022e-03

Joint ci ratio: 6.527880e-02	ci left: 1.881888e-03	ci right 2.009408e-03	k: 3598	n:1850000
Cons ci ratio: 1.608079e-02	ci left: 3.087079e-02	ci right 3.137177e-02	k: 57573	n:1850000
KS ci ratio: 1.034047e-01	ci left: 7.360714e-04	ci right 8.168559e-04	k: 1435	n:1850000
LMX1B   1850000 perm   1584 sec   (1168 perm/sec)   p_kst 7.756757e-04   p_cons 3.112054e-02   p_joint 1.944865e-03

Joint ci ratio: 6.510718e-02	ci left: 1.881819e-03	ci right 2.008987e-03	k: 3617	n:1860000
Cons ci ratio: 1.603511e-02	ci left: 3.088045e-02	ci right 3.138015e-02	k: 57901	n:1860000
KS ci ratio: 1.030464e-01	ci left: 7.373516e-04	ci right 8.179793e-04	k: 1445	n:1860000
LMX1B   1860000 perm   1599 sec   (1163 perm/sec)   p_kst 7.768817e-04   p_cons 3.112957e-02   p_joint 1.944624e-03

Joint ci ratio: 6.497271e-02	ci left: 1.879647e-03	ci right 2.006395e-03	k: 3632	n:1870000
Cons ci ratio: 1.599094e-02	ci left: 3.088575e-02	ci right 3.138415e-02	k: 58221	n:1870000
KS ci ratio: 1.027625e-01	ci left: 7.375765e-04	ci right 8.179932e-04	k: 1453	n:1870000
LMX1B   1870000 perm   1614 sec   (1159 perm/sec)   p_kst 7.770053e-04   p_cons 3.113422e-02   p_joint 1.942246e-03

Joint ci ratio: 6.470592e-02	ci left: 1.885348e-03	ci right 2.011939e-03	k: 3662	n:1880000
Cons ci ratio: 1.594686e-02	ci left: 3.089206e-02	ci right 3.138917e-02	k: 58543	n:1880000
KS ci ratio: 1.023759e-01	ci left: 7.393542e-04	ci right 8.196433e-04	k: 1464	n:1880000
LMX1B   1880000 perm   1629 sec   (1154 perm/sec)   p_kst 7.787234e-04   p_cons 3.113989e-02   p_joint 1.947872e-03

Joint ci ratio: 6.451243e-02	ci left: 1.886825e-03	ci right 2.013122e-03	k: 3684	n:1890000
Cons ci ratio: 1.590844e-02	ci left: 3.087827e-02	ci right 3.137396e-02	k: 58827	n:1890000
KS ci ratio: 1.020975e-01	ci left: 7.395669e-04	ci right 8.196475e-04	k: 1472	n:1890000
LMX1B   1890000 perm   1644 sec   (1149 perm/sec)   p_kst 7.788360e-04   p_cons 3.112540e-02   p_joint 1.949206e-03

Joint ci ratio: 6.439033e-02	ci left: 1.884144e-03	ci right 2.010014e-03	k: 3698	n:1900000
Cons ci ratio: 1.586683e-02	ci left: 3.087774e-02	ci right 3.137211e-02	k: 59136	n:1900000
KS ci ratio: 1.019593e-01	ci left: 7.377259e-04	ci right 8.174926e-04	k: 1476	n:1900000
LMX1B   1900000 perm   1660 sec   (1145 perm/sec)   p_kst 7.768421e-04   p_cons 3.112421e-02   p_joint 1.946316e-03

Joint ci ratio: 6.423425e-02	ci left: 1.883551e-03	ci right 2.009066e-03	k: 3716	n:1910000
Cons ci ratio: 1.582308e-02	ci left: 3.088661e-02	ci right 3.137974e-02	k: 59463	n:1910000
KS ci ratio: 1.016843e-01	ci left: 7.379453e-04	ci right 8.175076e-04	k: 1484	n:1910000
LMX1B   1910000 perm   1676 sec   (1140 perm/sec)   p_kst 7.769634e-04   p_cons 3.113246e-02   p_joint 1.945550e-03

Joint ci ratio: 7.632731e-02	ci left: 1.319502e-03	ci right 1.424719e-03	k: 2633	n:1920000
Cons ci ratio: 1.578541e-02	ci left: 3.087359e-02	ci right 3.136533e-02	k: 59748	n:1920000
KS ci ratio: 1.013775e-01	ci left: 7.386703e-04	ci right 8.180562e-04	k: 1493	n:1920000
LMX1B   1920000 perm   1691 sec   (1135 perm/sec)   p_kst 7.776042e-04   p_cons 3.111875e-02   p_joint 1.371354e-03

Joint ci ratio: 7.613967e-02	ci left: 1.319273e-03	ci right 1.424201e-03	k: 2646	n:1930000
Cons ci ratio: 1.574435e-02	ci left: 3.087464e-02	ci right 3.136511e-02	k: 60060	n:1930000
KS ci ratio: 1.011072e-01	ci left: 7.388832e-04	ci right 8.180676e-04	k: 1501	n:1930000
LMX1B   1930000 perm   1707 sec   (1131 perm/sec)   p_kst 7.777202e-04   p_cons 3.111917e-02   p_joint 1.370984e-03

Joint ci ratio: 1.439773e-01	ci left: 3.544565e-04	ci right 4.099393e-04	k: 740	n:1940000
Cons ci ratio: 1.570845e-02	ci left: 3.085720e-02	ci right 3.134626e-02	k: 60336	n:1940000
KS ci ratio: 1.007056e-01	ci left: 7.411040e-04	ci right 8.201923e-04	k: 1513	n:1940000
LMX1B   1940000 perm   1722 sec   (1126 perm/sec)   p_kst 7.798969e-04   p_cons 3.110103e-02   p_joint 3.814433e-04

Joint ci ratio: 1.346635e-01	ci left: 4.051059e-04	ci right 4.640866e-04	k: 846	n:1950000
Cons ci ratio: 1.566972e-02	ci left: 3.085169e-02	ci right 3.133945e-02	k: 60635	n:1950000
KS ci ratio: 1.003416e-01	ci left: 7.428027e-04	ci right 8.217690e-04	k: 1524	n:1950000
LMX1B   1950000 perm   1738 sec   (1122 perm/sec)   p_kst 7.815385e-04   p_cons 3.109487e-02   p_joint 4.338462e-04

Joint ci ratio: 1.432063e-01	ci left: 3.547746e-04	ci right 4.099844e-04	k: 748	n:1960000
Cons ci ratio: 1.563022e-02	ci left: 3.085030e-02	ci right 3.133680e-02	k: 60942	n:1960000
KS ci ratio: 9.985157e-02	ci left: 7.464744e-04	ci right 8.254208e-04	k: 1539	n:1960000
LMX1B   1960000 perm   1754 sec   (1118 perm/sec)   p_kst 7.852041e-04   p_cons 3.109286e-02   p_joint 3.816327e-04

Joint ci ratio: 1.341891e-01	ci left: 4.039364e-04	ci right 4.625231e-04	k: 852	n:1970000
Cons ci ratio: 1.559206e-02	ci left: 3.084489e-02	ci right 3.133010e-02	k: 61241	n:1970000
KS ci ratio: 9.972225e-02	ci left: 7.446650e-04	ci right 8.233120e-04	k: 1543	n:1970000
LMX1B   1970000 perm   1770 sec   (1113 perm/sec)   p_kst 7.832487e-04   p_cons 3.108680e-02   p_joint 4.324873e-04

Joint ci ratio: 1.339538e-01	ci left: 4.033606e-04	ci right 4.617531e-04	k: 855	n:1980000
Cons ci ratio: 1.555523e-02	ci left: 3.083550e-02	ci right 3.131941e-02	k: 61532	n:1980000
KS ci ratio: 9.952909e-02	ci left: 7.438588e-04	ci right 8.222596e-04	k: 1549	n:1980000
LMX1B   1980000 perm   1786 sec   (1109 perm/sec)   p_kst 7.823232e-04   p_cons 3.107677e-02   p_joint 4.318182e-04

Joint ci ratio: 7.498704e-02	ci left: 1.319923e-03	ci right 1.423245e-03	k: 2728	n:1990000
Cons ci ratio: 1.551490e-02	ci left: 3.084073e-02	ci right 3.132345e-02	k: 61852	n:1990000
KS ci ratio: 9.927323e-02	ci left: 7.440410e-04	ci right 8.222477e-04	k: 1557	n:1990000
LMX1B   1990000 perm   1802 sec   (1105 perm/sec)   p_kst 7.824121e-04   p_cons 3.108141e-02   p_joint 1.370854e-03

Outputting figure to mutsig2_images.part000000000097/LMX1B.2_1274_1990000_0.00078241_0.031081_0.0013709.png
                gene_name: LMX1B
               theta_stop: 0.099 
                    nperm: 1990000 
                     p_ks: 0.00078 
        ci_ks_bounds_left: 0.00074 
       ci_ks_bounds_right: 0.00082 
                   p_cons: 0.031 
      ci_cons_bounds_left: 0.031 
     ci_cons_bounds_right: 0.031 
                  p_joint: 0.0014 
     ci_joint_bounds_left: 0.0013 
    ci_joint_bounds_right: 0.0014 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000097
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 97 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1647>
Subject: Job 8704258: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1647>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000098> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:36:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000098.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000098.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 98  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000098.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    176.37 sec.
    Max Memory :      5743 MB
    Max Swap   :      8385 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
98
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 98
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 98: processing genes 8776 - 8866
Calculating significance of each gene.
Using projection method.
8776	LOC150786	1
8777	LOC153328	1
8778	LOC200726	1
8779	LOC285033	1
8780	LOC286238	1
8781	LOC391322	4.505717e-02
8782	LOC400696	1
8783	LOC401052	1
8784	LOC402644	1
8785	LOC440563	1
8786	LOC55908	1
8787	LOC642587	1
8788	LOC645961	1
8789	LOC646498	1
8790	LOC649330	1
8791	LOC653486	1
8792	LOC728819	1
8793	LOC729020	1
8794	LOC729991-MEF2B	1
8795	LOC81691	1
8796	LOH12CR1	1
8797	LONP1	4.234778e-01
8798	LONP2	1.153927e-01
8799	LONRF1	1
8800	LONRF2	1.119161e-01
8801	LONRF3	1
8802	LOX	8.487193e-02
8803	LOXL1	1
8804	LOXL2	1
8805	LOXL3	1
8806	LOXL4	1
8807	LPA	1
8808	LPAR1	1
8809	LPAR2	1
8810	LPAR3	1
8811	LPAR4	8.679083e-02
8812	LPAR5	1
8813	LPAR6	4.847185e-02
8814	LPCAT1	1
8815	LPCAT2	1
8816	LPCAT3	1
8817	LPCAT4	1
8818	LPGAT1	1
8819	LPHN1	1
8820	LPHN2	3.926078e-01
8821	LPHN3	4.031787e-01
8822	LPIN1	1
8823	LPIN2	1
8824	LPIN3	1
8825	LPL	4.523857e-02
8826	LPO	1
8827	LPP	2.031033e-01
8828	LPPR1	1
8829	LPPR2	1
In gene LPPR3 the following bins exceed PROBCAP:
    THCA-BJ-A18Y-TP	categ 6	N = 721     n = 1	mu =   1.74e-07
8830	LPPR3	6.575094e-02
8831	LPPR4	2.221493e-01
8832	LPPR5	1
8833	LPXN	1
8834	LRAT	1
8835	LRBA	1
8836	LRCH1	1.762007e-01
8837	LRCH2	1
8838	LRCH3	1
8839	LRCH4	1
8840	LRDD	1.786350e-01
8841	LRFN1	1
8842	LRFN2	1
8843	LRFN3	2.235607e-01
8844	LRFN4	1
8845	LRFN5	1
8846	LRG1	1
8847	LRGUK	1
8848	LRIG1	3.184921e-01
8849	LRIG2	1
8850	LRIG3	1.306343e-01
8851	LRIT1	1.495808e-01
8852	LRIT2	1
8853	LRIT3	1
8854	LRMP	1
In gene LRP1 the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 13734   n = 1	mu =   2.03e-07
8855	LRP1	3.893909e-02
8856	LRP10	3.182073e-01
In gene LRP11 the following bins exceed PROBCAP:
    THCA-EM-A1CW-TP	categ 6	N = 914     n = 1	mu =   1.37e-07
8857	LRP11	6.730673e-02
8858	LRP12	1
8859	LRP1B	6.184747e-01
8860	LRP2	6.940374e-01
8861	LRP2BP	1
8862	LRP3	1
8863	LRP4	5.551606e-01
8864	LRP5	2.228712e-01
8865	LRP5L	1
8866	LRP6	1
Done

Running MutSig 2:
Scatter job 98: processing genes 8776 - 8866
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
LRP1
Processing conservation and coverage...
71% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.975474e-02	ci left: 3.733580e-01	ci right 3.925103e-01	k: 3829	n:10000
Cons ci ratio: 1.693796e-02	ci left: 8.354145e-01	ci right 8.497853e-01	k: 8427	n:10000
KS ci ratio: 6.268811e-02	ci left: 2.722050e-01	ci right 2.899227e-01	k: 2810	n:10000
LRP1   10000 perm   3 sec   (2871 perm/sec)   p_kst 2.810000e-01   p_cons 8.427000e-01   p_joint 3.829000e-01

Outputting figure to mutsig2_images.part000000000098/LRP1.6_13991_10000_0.281_0.8427_0.3829.png
                gene_name: LRP1
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.27 
       ci_ks_bounds_right: 0.29 
                   p_cons: 0.84 
      ci_cons_bounds_left: 0.84 
     ci_cons_bounds_right: 0.85 
                  p_joint: 0.38 
     ci_joint_bounds_left: 0.37 
    ci_joint_bounds_right: 0.39 

Current progress: 25 percent done.
LONP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.955631e-02	ci left: 4.855531e-01	ci right 5.052495e-01	k: 4954	n:10000
Cons ci ratio: 7.961909e-02	ci left: 1.872743e-01	ci right 2.029038e-01	k: 1950	n:10000
KS ci ratio: 4.118018e-02	ci left: 4.654705e-01	ci right 4.851439e-01	k: 4753	n:10000
LONP2   10000 perm   2 sec   (5809 perm/sec)   p_kst 4.753000e-01   p_cons 1.950000e-01   p_joint 4.954000e-01

Outputting figure to mutsig2_images.part000000000098/LONP2.2_2619_10000_0.4753_0.195_0.4954.png
                gene_name: LONP2
               theta_stop: 0.080 
                    nperm: 10000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.47 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.20 
      ci_cons_bounds_left: 0.19 
     ci_cons_bounds_right: 0.20 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 50 percent done.
LRP1B
Processing conservation and coverage...
70% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.857206e-03	ci left: 9.357874e-01	ci right 9.451540e-01	k: 9406	n:10000
Cons ci ratio: 1.115922e-02	ci left: 9.197660e-01	ci right 9.301849e-01	k: 9251	n:10000
KS ci ratio: 6.947002e-02	ci left: 2.330389e-01	ci right 2.499119e-01	k: 2414	n:10000
LRP1B   10000 perm   3 sec   (3168 perm/sec)   p_kst 2.414000e-01   p_cons 9.251000e-01   p_joint 9.406000e-01

Outputting figure to mutsig2_images.part000000000098/LRP1B.2_14164_10000_0.2414_0.9251_0.9406.png
                gene_name: LRP1B
               theta_stop: 0.069 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.93 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.93 
                  p_joint: 0.94 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.95 

Current progress: 75 percent done.
LRP5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.896504e-02	ci left: 6.373404e-01	ci right 6.561741e-01	k: 6468	n:10000
Cons ci ratio: 1.418244e-02	ci left: 8.778686e-01	ci right 8.905067e-01	k: 8843	n:10000
KS ci ratio: 3.839503e-02	ci left: 5.004505e-01	ci right 5.201435e-01	k: 5103	n:10000
LRP5   10000 perm   2 sec   (5120 perm/sec)   p_kst 5.103000e-01   p_cons 8.843000e-01   p_joint 6.468000e-01

Outputting figure to mutsig2_images.part000000000098/LRP5.2_4940_10000_0.5103_0.8843_0.6468.png
                gene_name: LRP5
               theta_stop: 0.038 
                    nperm: 10000 
                     p_ks: 0.51 
        ci_ks_bounds_left: 0.50 
       ci_ks_bounds_right: 0.52 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.65 
     ci_joint_bounds_left: 0.64 
    ci_joint_bounds_right: 0.66 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000098
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 98 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1650>
Subject: Job 8704259: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1650>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000099> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:36:51 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000099.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000099.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 99  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000099.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    183.65 sec.
    Max Memory :      5504 MB
    Max Swap   :      8318 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
99
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 99
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 99: processing genes 8867 - 8956
Calculating significance of each gene.
Using projection method.
8867	LRP8	1
8868	LRPAP1	1.095794e-01
8869	LRPPRC	1
8870	LRRC1	1
8871	LRRC10	1
8872	LRRC14	1
8873	LRRC14B	1
8874	LRRC15	1
8875	LRRC16A	1
8876	LRRC16B	1
8877	LRRC17	1
8878	LRRC18	1
8879	LRRC19	1
8880	LRRC2	1
8881	LRRC20	1
8882	LRRC23	1
8883	LRRC24	1
8884	LRRC25	1
8885	LRRC27	1
8886	LRRC28	1
8887	LRRC29	1
8888	LRRC3	1
8889	LRRC30	1
8890	LRRC31	1
8891	LRRC32	9.506627e-02
8892	LRRC33	1
8893	LRRC34	1
8894	LRRC36	1.780293e-01
8895	LRRC37A2	1.088793e-01
8896	LRRC37A3	1
8897	LRRC37B	1
8898	LRRC39	1
8899	LRRC3B	1
8900	LRRC4	1
8901	LRRC40	1
8902	LRRC41	1
8903	LRRC42	1.769839e-01
8904	LRRC43	2.226290e-01
8905	LRRC45	1
8906	LRRC46	1
8907	LRRC47	1
8908	LRRC48	1
8909	LRRC49	1
8910	LRRC4B	1
8911	LRRC4C	2.242584e-01
8912	LRRC50	1
8913	LRRC52	1
8914	LRRC55	1.230833e-01
8915	LRRC56	1.670612e-01
8916	LRRC57	1
8917	LRRC58	1
8918	LRRC59	1
8919	LRRC6	1
8920	LRRC61	1
8921	LRRC66	1
8922	LRRC67	1
8923	LRRC7	2.169498e-01
8924	LRRC8A	1.970476e-02
8925	LRRC8B	1
8926	LRRC8C	1
8927	LRRC8D	1
8928	LRRC8E	1
8929	LRRCC1	1.775320e-01
8930	LRRFIP1	1
8931	LRRFIP2	1
8932	LRRIQ1	1
8933	LRRIQ3	7.647699e-04
8934	LRRIQ4	1
8935	LRRK1	1
8936	LRRK2	1
8937	LRRN1	1
8938	LRRN2	1
8939	LRRN3	1
8940	LRRN4	5.114732e-02
8941	LRRN4CL	1
8942	LRRTM1	1
8943	LRRTM2	1.237506e-01
8944	LRRTM3	1
8945	LRRTM4	4.565817e-02
8946	LRSAM1	1.947156e-02
8947	LRTM1	1
8948	LRTM2	1
8949	LRTOMT	1
8950	LRWD1	1
8951	LSAMP	4.817864e-02
8952	LSG1	1
8953	LSM1	1
8954	LSM10	1
8955	LSM11	1
8956	LSM12	1
Done

Running MutSig 2:
Scatter job 99: processing genes 8867 - 8956
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
LRRIQ3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.249459e-02	ci left: 3.484968e-01	ci right 3.673860e-01	k: 3579	n:10000
Cons ci ratio: 5.111871e-02	ci left: 3.607251e-01	ci right 3.797506e-01	k: 3702	n:10000
KS ci ratio: 4.978634e-02	ci left: 3.730595e-01	ci right 3.922089e-01	k: 3826	n:10000
LRRIQ3   10000 perm   2 sec   (5576 perm/sec)   p_kst 3.826000e-01   p_cons 3.702000e-01   p_joint 3.579000e-01

Outputting figure to mutsig2_images.part000000000099/LRRIQ3.3_1903_10000_0.3826_0.3702_0.3579.png
                gene_name: LRRIQ3
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.39 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.36 
     ci_joint_bounds_left: 0.35 
    ci_joint_bounds_right: 0.37 

Current progress: 33 percent done.
LRRC8A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.282482e-03	ci left: 9.859942e-01	ci right 9.903144e-01	k: 9883	n:10000
Cons ci ratio: 2.577713e-02	ci left: 6.889954e-01	ci right 7.070891e-01	k: 6981	n:10000
KS ci ratio: 5.381047e-02	ci left: 3.372686e-01	ci right 3.560208e-01	k: 3466	n:10000
LRRC8A   10000 perm   2 sec   (5421 perm/sec)   p_kst 3.466000e-01   p_cons 6.981000e-01   p_joint 9.883000e-01

Outputting figure to mutsig2_images.part000000000099/LRRC8A.2_2441_10000_0.3466_0.6981_0.9883.png
                gene_name: LRRC8A
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.35 
        ci_ks_bounds_left: 0.34 
       ci_ks_bounds_right: 0.36 
                   p_cons: 0.70 
      ci_cons_bounds_left: 0.69 
     ci_cons_bounds_right: 0.71 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 67 percent done.
LRSAM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.620585e-02	ci left: 6.819395e-01	ci right 7.001491e-01	k: 6911	n:10000
Cons ci ratio: 6.916798e-02	ci left: 2.346196e-01	ci right 2.515303e-01	k: 2430	n:10000
KS ci ratio: 2.714896e-02	ci left: 6.665257e-01	ci right 6.849718e-01	k: 6758	n:10000
LRSAM1   10000 perm   2 sec   (5952 perm/sec)   p_kst 6.758000e-01   p_cons 2.430000e-01   p_joint 6.911000e-01

Outputting figure to mutsig2_images.part000000000099/LRSAM1.2_2268_10000_0.6758_0.243_0.6911.png
                gene_name: LRSAM1
               theta_stop: 0.069 
                    nperm: 10000 
                     p_ks: 0.68 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.68 
                   p_cons: 0.24 
      ci_cons_bounds_left: 0.23 
     ci_cons_bounds_right: 0.25 
                  p_joint: 0.69 
     ci_joint_bounds_left: 0.68 
    ci_joint_bounds_right: 0.70 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000099
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 99 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1705>
Subject: Job 8704260: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1705>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000100> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:36:18 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000100.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000100.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 100  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000100.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    142.88 sec.
    Max Memory :      4708 MB
    Max Swap   :      7512 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
100
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 100
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 100: processing genes 8957 - 9047
Calculating significance of each gene.
Using projection method.
8957	LSM14A	1
8958	LSM14B	1
8959	LSM2	1
8960	LSM3	1
8961	LSM4	1
8962	LSM5	1
8963	LSM6	1
8964	LSM7	1
8965	LSMD1	1
8966	LSP1	1
In gene LSR the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 1720    n = 1	mu =   2.02e-07
8967	LSR	1.766301e-01
8968	LSS	1
8969	LST-3TM12	1
8970	LST1	1
8971	LTA	1
8972	LTA4H	1
8973	LTB	1
8974	LTB4R	1.027231e-02
In gene LTB4R2 the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 993     n = 1	mu =   1.67e-07
8975	LTB4R2	8.549740e-02
In gene LTBP1 the following bins exceed PROBCAP:
    THCA-ET-A3BO-TP	categ 6	N = 4859    n = 1	mu =   1.40e-07
8976	LTBP1	3.719049e-01
8977	LTBP2	1.105508e-01
8978	LTBP3	1.583514e-01
8979	LTBP4	1
8980	LTBR	1
8981	LTC4S	1
8982	LTF	2.648731e-01
8983	LTK	1
8984	LTV1	1
8985	LUC7L	1
8986	LUC7L2	1
8987	LUC7L3	2.557584e-02
8988	LUM	1
8989	LUZP1	4.046765e-01
8990	LUZP2	1
8991	LUZP4	1
8992	LXN	1
8993	LY6D	1
8994	LY6E	1
8995	LY6G5B	1
8996	LY6G5C	1
8997	LY6G6C	1
8998	LY6G6D	1
8999	LY6G6F	1
9000/18093 9000	LY6H	1
9001	LY6K	1
9002	LY75	2.583060e-01
9003	LY86	1
9004	LY9	1.728538e-01
9005	LY96	1
9006	LYAR	1
9007	LYG1	1
9008	LYG2	1
9009	LYN	1
9010	LYNX1	1
9011	LYPD1	1
9012	LYPD2	1
9013	LYPD3	1
9014	LYPD4	1
9015	LYPD5	1
9016	LYPD6	1
In gene LYPD6B the following bins exceed PROBCAP:
    THCA-DJ-A2Q3-TP	categ 6	N = 572     n = 1	mu =   1.36e-07
9017	LYPD6B	4.275905e-02
9018	LYPLA1	1
9019	LYPLA2	1
9020	LYPLAL1	1.411841e-02
9021	LYRM1	1
9022	LYRM2	1
9023	LYRM4	1
9024	LYRM5	1
9025	LYRM7	1
9026	LYSMD1	1
9027	LYSMD2	1
9028	LYSMD3	1
9029	LYSMD4	1
9030	LYST	1
9031	LYVE1	1
9032	LYZ	1.593046e-02
9033	LYZL1	1
9034	LYZL2	7.082294e-02
9035	LYZL4	1
9036	LYZL6	1
9037	LZIC	1
9038	LZTFL1	1
9039	LZTR1	3.507368e-01
9040	LZTS1	1
9041	LZTS2	2.597376e-01
9042	M6PR	1
9043	MAB21L1	7.641818e-02
9044	MAB21L2	1
9045	MACC1	1
9046	MACF1	9.721893e-01
9047	MACROD1	1
Done

Running MutSig 2:
Scatter job 100: processing genes 8957 - 9047
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
LTBP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.735752e-02	ci left: 8.286969e-01	ci right 8.433068e-01	k: 8361	n:10000
Cons ci ratio: 3.688720e-02	ci left: 5.204606e-01	ci right 5.401218e-01	k: 5303	n:10000
KS ci ratio: 7.492393e-02	ci left: 2.067847e-01	ci right 2.229817e-01	k: 2148	n:10000
LTBP2   10000 perm   2 sec   (4785 perm/sec)   p_kst 2.148000e-01   p_cons 5.303000e-01   p_joint 8.361000e-01

Outputting figure to mutsig2_images.part000000000100/LTBP2.2_5610_10000_0.2148_0.5303_0.8361.png
                gene_name: LTBP2
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.21 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.22 
                   p_cons: 0.53 
      ci_cons_bounds_left: 0.52 
     ci_cons_bounds_right: 0.54 
                  p_joint: 0.84 
     ci_joint_bounds_left: 0.83 
    ci_joint_bounds_right: 0.84 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000100
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 100 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1728>
Subject: Job 8704264: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1728>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000101> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:36:13 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000101.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000101.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 101  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000101.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    109.73 sec.
    Max Memory :      5576 MB
    Max Swap   :      8269 MB

    Max Processes  :         7
    Max Threads    :        67

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
101
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 101
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 101: processing genes 9048 - 9137
Calculating significance of each gene.
Using projection method.
9048	MACROD2	1
9049	MAD1L1	1
9050	MAD2L1	1
9051	MAD2L1BP	1
9052	MAD2L2	1
9053	MADCAM1	1
9054	MADD	1
9055	MAEA	1
9056	MAEL	1
9057	MAF	1
9058	MAF1	1
9059	MAFB	1
9060	MAFF	1
9061	MAFG	1
9062	MAFK	1
9063	MAG	1
9064	MAGEA1	1.121805e-01
9065	MAGEA10	1.504187e-01
9066	MAGEA11	1
9067	MAGEA12	1
9068	MAGEA3	1
9069	MAGEA4	1
9070	MAGEA5	1
9071	MAGEA6	8.463439e-02
9072	MAGEA8	1
9073	MAGEB1	1
9074	MAGEB10	1.387997e-01
9075	MAGEB16	1
9076	MAGEB18	1
9077	MAGEB2	1
9078	MAGEB3	1.305607e-01
9079	MAGEB4	1.313300e-01
9080	MAGEB6	1
In gene MAGEC1 the following bins exceed PROBCAP:
    THCA-FK-A3SE-TP	categ 6	N = 3437    n = 1	mu =   1.00e-07
9081	MAGEC1	1.800035e-01
9082	MAGEC2	1
9083	MAGEC3	1
9084	MAGED1	3.389481e-02
9085	MAGED2	3.407625e-02
9086	MAGEE1	1
9087	MAGEE2	1.667032e-01
9088	MAGEF1	9.479637e-02
9089	MAGEH1	1
9090	MAGEL2	1
9091	MAGI1	1
9092	MAGI2	3.929685e-01
9093	MAGI3	1
9094	MAGIX	1
9095	MAGOH	4.836359e-02
9096	MAGOHB	1
9097	MAGT1	1
9098	MAK	1
9099	MAK16	1
9100	MAL	1
9101	MAL2	1
9102	MALL	1
9103	MALT1	1
9104	MAMDC2	1
9105	MAMDC4	2.613436e-01
9106	MAML1	1
9107	MAML2	1
9108	MAML3	1
9109	MAMLD1	1.880866e-01
9110	MAMSTR	1
9111	MAN1A1	1
9112	MAN1A2	1
9113	MAN1B1	1
9114	MAN1C1	1
9115	MAN2A1	1
9116	MAN2A2	1
9117	MAN2B1	1
9118	MAN2B2	1
9119	MAN2C1	2.341772e-01
9120	MANBA	1
9121	MANBAL	1
9122	MANEA	7.428564e-02
9123	MANEAL	1
9124	MANF	1
9125	MANSC1	1
9126	MAOA	1
9127	MAOB	1
9128	MAP1A	1.408204e-01
9129	MAP1B	1.852267e-01
9130	MAP1D	1
9131	MAP1LC3A	1
9132	MAP1LC3B	1
9133	MAP1LC3B2	1
9134	MAP1LC3C	1
9135	MAP1S	1
9136	MAP2	1
9137	MAP2K1	1
Done

Running MutSig 2:
Scatter job 101: processing genes 9048 - 9137
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MAP1A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.786312e-02	ci left: 1.942671e-01	ci right 2.101068e-01	k: 2021	n:10000
Cons ci ratio: 2.371229e-02	ci left: 7.233032e-01	ci right 7.407614e-01	k: 7321	n:10000
KS ci ratio: 1.203560e-01	ci left: 9.009981e-02	ci right 1.017368e-01	k: 958	n:10000
MAP1A   10000 perm   2 sec   (4297 perm/sec)   p_kst 9.580000e-02   p_cons 7.321000e-01   p_joint 2.021000e-01

Joint ci ratio: 4.813796e-02	ci left: 2.429691e-01	ci right 2.550039e-01	k: 4979	n:20000
Cons ci ratio: 1.676525e-02	ci left: 7.259542e-01	ci right 7.382782e-01	k: 14643	n:20000
KS ci ratio: 8.590112e-02	ci left: 9.023491e-02	ci right 9.838348e-02	k: 1885	n:20000
MAP1A   20000 perm   7 sec   (2954 perm/sec)   p_kst 9.425000e-02   p_cons 7.321500e-01   p_joint 2.489500e-01

Outputting figure to mutsig2_images.part000000000101/MAP1A.3_8424_20000_0.09425_0.73215_0.24895.png
                gene_name: MAP1A
               theta_stop: 0.086 
                    nperm: 20000 
                     p_ks: 0.094 
        ci_ks_bounds_left: 0.090 
       ci_ks_bounds_right: 0.098 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.74 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.26 

Current progress: 33 percent done.
MAGED1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.645486e-01	ci left: 4.926618e-02	ci right 5.819605e-02	k: 536	n:10000
Cons ci ratio: 1.072707e-01	ci left: 1.114460e-01	ci right 1.241776e-01	k: 1177	n:10000
KS ci ratio: 8.846994e-02	ci left: 1.567914e-01	ci right 1.714049e-01	k: 1640	n:10000
MAGED1   10000 perm   1 sec   (6824 perm/sec)   p_kst 1.640000e-01   p_cons 1.177000e-01   p_joint 5.360000e-02

Joint ci ratio: 1.148937e-01	ci left: 5.183164e-02	ci right 5.819850e-02	k: 1099	n:20000
Cons ci ratio: 7.627586e-02	ci left: 1.121830e-01	ci right 1.211288e-01	k: 2332	n:20000
KS ci ratio: 6.260429e-02	ci left: 1.587444e-01	ci right 1.690536e-01	k: 3277	n:20000
MAGED1   20000 perm   3 sec   (6100 perm/sec)   p_kst 1.638500e-01   p_cons 1.166000e-01   p_joint 5.495000e-02

Joint ci ratio: 9.303778e-02	ci left: 5.326166e-02	ci right 5.849143e-02	k: 1675	n:30000
Cons ci ratio: 6.174627e-02	ci left: 1.147645e-01	ci right 1.221096e-01	k: 3552	n:30000
KS ci ratio: 5.162590e-02	ci left: 1.570223e-01	ci right 1.653768e-01	k: 4835	n:30000
MAGED1   30000 perm   5 sec   (5800 perm/sec)   p_kst 1.611667e-01   p_cons 1.184000e-01   p_joint 5.583333e-02

Outputting figure to mutsig2_images.part000000000101/MAGED1.2_2553_30000_0.16117_0.1184_0.055833.png
                gene_name: MAGED1
               theta_stop: 0.093 
                    nperm: 30000 
                     p_ks: 0.16 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.17 
                   p_cons: 0.12 
      ci_cons_bounds_left: 0.11 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.056 
     ci_joint_bounds_left: 0.053 
    ci_joint_bounds_right: 0.058 

Current progress: 67 percent done.
MAP1B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.324517e-02	ci left: 3.420374e-01	ci right 3.608492e-01	k: 3514	n:10000
Cons ci ratio: 7.312811e-02	ci left: 2.149717e-01	ci right 2.313898e-01	k: 2231	n:10000
KS ci ratio: 1.246706e-02	ci left: 9.023712e-01	ci right 9.137898e-01	k: 9082	n:10000
MAP1B   10000 perm   2 sec   (5162 perm/sec)   p_kst 9.082000e-01   p_cons 2.231000e-01   p_joint 3.514000e-01

Outputting figure to mutsig2_images.part000000000101/MAP1B.2_7435_10000_0.9082_0.2231_0.3514.png
                gene_name: MAP1B
               theta_stop: 0.073 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.90 
       ci_ks_bounds_right: 0.91 
                   p_cons: 0.22 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.23 
                  p_joint: 0.35 
     ci_joint_bounds_left: 0.34 
    ci_joint_bounds_right: 0.36 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000101
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 101 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1725>
Subject: Job 8704265: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1725>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000102> was used as the working directory.
Started at Thu Nov 15 19:34:18 2012
Results reported at Thu Nov 15 19:38:29 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000102.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000102.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 102  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000102.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    250.17 sec.
    Max Memory :      5892 MB
    Max Swap   :      8520 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
102
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 102
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 102: processing genes 9138 - 9227
Calculating significance of each gene.
Using projection method.
9138	MAP2K2	1
9139	MAP2K3	1
9140	MAP2K4	1
9141	MAP2K5	1.762342e-01
9142	MAP2K6	7.586269e-02
9143	MAP2K7	1
9144	MAP3K1	4.600263e-01
9145	MAP3K10	1
9146	MAP3K11	1
9147	MAP3K12	1
9148	MAP3K13	1
9149	MAP3K14	1
9150	MAP3K15	1
9151	MAP3K2	1
9152	MAP3K3	1.955571e-04
9153	MAP3K4	1
9154	MAP3K5	1
9155	MAP3K6	2.127301e-01
9156	MAP3K7	1
9157	MAP3K8	1.112985e-01
9158	MAP3K9	1
9159	MAP4	1
9160	MAP4K1	1
9161	MAP4K2	1
9162	MAP4K3	1
9163	MAP4K4	2.882360e-01
9164	MAP4K5	1
9165	MAP6	1
9166	MAP7	1
9167	MAP7D1	1
9168	MAP7D2	1.360328e-01
9169	MAP7D3	1
9170	MAP9	1
9171	MAPK1	1
9172	MAPK10	1.488051e-01
9173	MAPK11	1
9174	MAPK12	1
9175	MAPK13	1
9176	MAPK14	1
9177	MAPK15	1
9178	MAPK1IP1L	1
9179	MAPK3	1
9180	MAPK4	8.063126e-02
9181	MAPK6	1
9182	MAPK7	1
9183	MAPK8	1
9184	MAPK8IP1	1
9185	MAPK8IP2	1.080461e-01
9186	MAPK8IP3	1
9187	MAPK9	1
9188	MAPKAP1	1
9189	MAPKAPK2	1
9190	MAPKAPK3	6.088045e-02
9191	MAPKAPK5	1
9192	MAPKBP1	1
9193	MAPKSP1	1
9194	MAPRE1	2.332501e-02
9195	MAPRE2	1
9196	MAPRE3	1
9197	MAPT	1
9198	MARCH1	6.867745e-02
9199	MARCH10	2.661505e-01
9200	MARCH11	1
9201	MARCH2	1
9202	MARCH3	1
9203	MARCH4	1
9204	MARCH5	1
9205	MARCH6	1.436827e-01
9206	MARCH7	2.860620e-01
9207	MARCH8	3.050251e-02
9208	MARCH9	1
9209	MARCKS	1
9210	MARCKSL1	1
9211	MARCO	1
9212	MARK1	1
9213	MARK2	2.912791e-02
9214	MARK3	1
9215	MARK4	1
9216	MARS	1.031330e-01
9217	MARS2	7.351662e-02
9218	MARVELD2	1
9219	MARVELD3	1
9220	MAS1	1
9221	MAS1L	1.242721e-01
9222	MASP1	1
9223	MASP2	1
9224	MAST1	3.409675e-01
In gene MAST2 the following bins exceed PROBCAP:
    THCA-FY-A3I4-TP	categ 6	N = 5258    n = 1	mu =   1.02e-07
9225	MAST2	9.351281e-02
9226	MAST3	1
9227	MAST4	1
Done

Running MutSig 2:
Scatter job 102: processing genes 9138 - 9227
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MAP3K3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.666552e-01	ci left: 9.230735e-03	ci right 1.346114e-02	k: 112	n:10000
Cons ci ratio: 6.890587e-02	ci left: 2.360028e-01	ci right 2.529463e-01	k: 2444	n:10000
KS ci ratio: 6.346671e-01	ci left: 2.606439e-03	ci right 5.096391e-03	k: 37	n:10000
MAP3K3   10000 perm   2 sec   (6188 perm/sec)   p_kst 3.700000e-03   p_cons 2.444000e-01   p_joint 1.120000e-02

Joint ci ratio: 2.800644e-01	ci left: 8.341806e-03	ci right 1.110354e-02	k: 193	n:20000
Cons ci ratio: 4.874403e-02	ci left: 2.383577e-01	ci right 2.503167e-01	k: 4886	n:20000
KS ci ratio: 4.854134e-01	ci left: 2.465236e-03	ci right 4.084517e-03	k: 64	n:20000
MAP3K3   20000 perm   5 sec   (3750 perm/sec)   p_kst 3.200000e-03   p_cons 2.443000e-01   p_joint 9.650000e-03

Joint ci ratio: 1.646946e-01	ci left: 1.700528e-02	ci right 2.008897e-02	k: 555	n:30000
Cons ci ratio: 3.960819e-02	ci left: 2.412339e-01	ci right 2.510153e-01	k: 7383	n:30000
KS ci ratio: 3.800645e-01	ci left: 2.863519e-03	ci right 4.235401e-03	k: 105	n:30000
MAP3K3   30000 perm   7 sec   (4068 perm/sec)   p_kst 3.500000e-03   p_cons 2.461000e-01   p_joint 1.850000e-02

Joint ci ratio: 1.233527e-01	ci left: 2.310407e-02	ci right 2.616548e-02	k: 984	n:40000
Cons ci ratio: 3.439520e-02	ci left: 2.408908e-01	ci right 2.493463e-01	k: 9804	n:40000
KS ci ratio: 3.205363e-01	ci left: 3.128777e-03	ci right 4.345020e-03	k: 148	n:40000
MAP3K3   40000 perm   9 sec   (4233 perm/sec)   p_kst 3.700000e-03   p_cons 2.451000e-01   p_joint 2.460000e-02

Joint ci ratio: 1.468011e-01	ci left: 1.302701e-02	ci right 1.510997e-02	k: 702	n:50000
Cons ci ratio: 3.082275e-02	ci left: 2.406382e-01	ci right 2.481915e-01	k: 12220	n:50000
KS ci ratio: 2.752498e-01	ci left: 3.484334e-03	ci right 4.614445e-03	k: 201	n:50000
MAP3K3   50000 perm   12 sec   (4257 perm/sec)   p_kst 4.020000e-03   p_cons 2.444000e-01   p_joint 1.404000e-02

Joint ci ratio: 1.924588e-01	ci left: 6.205638e-03	ci right 7.542730e-03	k: 411	n:60000
Cons ci ratio: 2.811209e-02	ci left: 2.412973e-01	ci right 2.481940e-01	k: 14684	n:60000
KS ci ratio: 2.602608e-01	ci left: 3.276731e-03	ci right 4.272217e-03	k: 225	n:60000
MAP3K3   60000 perm   14 sec   (4312 perm/sec)   p_kst 3.750000e-03   p_cons 2.447333e-01   p_joint 6.850000e-03

Joint ci ratio: 1.969288e-01	ci left: 5.074209e-03	ci right 6.195940e-03	k: 393	n:70000
Cons ci ratio: 2.603329e-02	ci left: 2.414618e-01	ci right 2.478450e-01	k: 17125	n:70000
KS ci ratio: 2.435967e-01	ci left: 3.236925e-03	ci right 4.147836e-03	k: 257	n:70000
MAP3K3   70000 perm   16 sec   (4328 perm/sec)   p_kst 3.671429e-03   p_cons 2.446429e-01   p_joint 5.614286e-03

Joint ci ratio: 1.549409e-01	ci left: 7.322214e-03	ci right 8.563869e-03	k: 634	n:80000
Cons ci ratio: 2.430390e-02	ci left: 2.423962e-01	ci right 2.483723e-01	k: 19630	n:80000
KS ci ratio: 2.270374e-01	ci left: 3.291109e-03	ci right 4.145503e-03	k: 296	n:80000
MAP3K3   80000 perm   18 sec   (4327 perm/sec)   p_kst 3.700000e-03   p_cons 2.453750e-01   p_joint 7.925000e-03

Joint ci ratio: 1.186189e-01	ci left: 1.127727e-02	ci right 1.271000e-02	k: 1078	n:90000
Cons ci ratio: 2.291523e-02	ci left: 2.425470e-01	ci right 2.481805e-01	k: 22082	n:90000
KS ci ratio: 2.134528e-01	ci left: 3.334886e-03	ci right 4.142065e-03	k: 335	n:90000
MAP3K3   90000 perm   21 sec   (4309 perm/sec)   p_kst 3.722222e-03   p_cons 2.453556e-01   p_joint 1.197778e-02

Joint ci ratio: 9.026590e-02	ci left: 1.767381e-02	ci right 1.935428e-02	k: 1850	n:100000
Cons ci ratio: 2.171506e-02	ci left: 2.431039e-01	ci right 2.484508e-01	k: 24577	n:100000
KS ci ratio: 2.028631e-01	ci left: 3.342642e-03	ci right 4.106588e-03	k: 371	n:100000
MAP3K3   100000 perm   23 sec   (4284 perm/sec)   p_kst 3.710000e-03   p_cons 2.457700e-01   p_joint 1.850000e-02

Joint ci ratio: 7.612831e-02	ci left: 2.263960e-02	ci right 2.444019e-02	k: 2588	n:110000
Cons ci ratio: 2.134751e-02	ci left: 2.321074e-01	ci right 2.371248e-01	k: 25807	n:110000
KS ci ratio: 1.956424e-01	ci left: 3.280604e-03	ci right 4.000503e-03	k: 399	n:110000
MAP3K3   110000 perm   26 sec   (4256 perm/sec)   p_kst 3.627273e-03   p_cons 2.346091e-01   p_joint 2.352727e-02

Joint ci ratio: 7.488507e-02	ci left: 2.148832e-02	ci right 2.316821e-02	k: 2678	n:120000
Cons ci ratio: 2.043071e-02	ci left: 2.323542e-01	ci right 2.371586e-01	k: 28170	n:120000
KS ci ratio: 1.854802e-01	ci left: 3.364353e-03	ci right 4.059970e-03	k: 444	n:120000
MAP3K3   120000 perm   28 sec   (4221 perm/sec)   p_kst 3.700000e-03   p_cons 2.347500e-01   p_joint 2.231667e-02

Joint ci ratio: 8.276856e-02	ci left: 1.625902e-02	ci right 1.767034e-02	k: 2204	n:130000
Cons ci ratio: 1.964627e-02	ci left: 2.321376e-01	ci right 2.367511e-01	k: 30477	n:130000
KS ci ratio: 1.797223e-01	ci left: 3.318431e-03	ci right 3.980936e-03	k: 473	n:130000
MAP3K3   130000 perm   31 sec   (4178 perm/sec)   p_kst 3.638462e-03   p_cons 2.344385e-01   p_joint 1.695385e-02

Joint ci ratio: 8.259153e-02	ci left: 1.518125e-02	ci right 1.649606e-02	k: 2216	n:140000
Cons ci ratio: 1.889195e-02	ci left: 2.329732e-01	ci right 2.374235e-01	k: 32927	n:140000
KS ci ratio: 1.720822e-01	ci left: 3.375033e-03	ci right 4.017221e-03	k: 516	n:140000
MAP3K3   140000 perm   34 sec   (4136 perm/sec)   p_kst 3.685714e-03   p_cons 2.351929e-01   p_joint 1.582857e-02

Joint ci ratio: 8.715564e-02	ci left: 1.272637e-02	ci right 1.389256e-02	k: 1995	n:150000
Cons ci ratio: 1.825677e-02	ci left: 2.329425e-01	ci right 2.372411e-01	k: 35263	n:150000
KS ci ratio: 1.668421e-01	ci left: 3.360699e-03	ci right 3.978730e-03	k: 549	n:150000
MAP3K3   150000 perm   37 sec   (4090 perm/sec)   p_kst 3.660000e-03   p_cons 2.350867e-01   p_joint 1.330000e-02

Joint ci ratio: 9.016670e-02	ci left: 1.114829e-02	ci right 1.220702e-02	k: 1867	n:160000
Cons ci ratio: 1.767979e-02	ci left: 2.329553e-01	ci right 2.371168e-01	k: 37605	n:160000
KS ci ratio: 1.619139e-01	ci left: 3.354414e-03	ci right 3.951294e-03	k: 583	n:160000
MAP3K3   160000 perm   40 sec   (4047 perm/sec)   p_kst 3.643750e-03   p_cons 2.350312e-01   p_joint 1.166875e-02

Joint ci ratio: 8.316605e-02	ci left: 1.236320e-02	ci right 1.344174e-02	k: 2192	n:170000
Cons ci ratio: 1.714277e-02	ci left: 2.332089e-01	ci right 2.372472e-01	k: 39988	n:170000
KS ci ratio: 1.580411e-01	ci left: 3.320850e-03	ci right 3.896283e-03	k: 612	n:170000
MAP3K3   170000 perm   43 sec   (3997 perm/sec)   p_kst 3.600000e-03   p_cons 2.352235e-01   p_joint 1.289412e-02

Joint ci ratio: 8.371954e-02	ci left: 1.152928e-02	ci right 1.254208e-02	k: 2165	n:180000
Cons ci ratio: 1.666731e-02	ci left: 2.331037e-01	ci right 2.370271e-01	k: 42311	n:180000
KS ci ratio: 1.527707e-01	ci left: 3.365965e-03	ci right 3.927986e-03	k: 655	n:180000
MAP3K3   180000 perm   46 sec   (3950 perm/sec)   p_kst 3.638889e-03   p_cons 2.350611e-01   p_joint 1.202778e-02

Joint ci ratio: 8.770216e-02	ci left: 9.948689e-03	ci right 1.086634e-02	k: 1976	n:190000
Cons ci ratio: 1.623410e-02	ci left: 2.329060e-01	ci right 2.367232e-01	k: 44614	n:190000
KS ci ratio: 1.485288e-01	ci left: 3.381272e-03	ci right 3.928780e-03	k: 693	n:190000
MAP3K3   190000 perm   49 sec   (3903 perm/sec)   p_kst 3.647368e-03   p_cons 2.348105e-01   p_joint 1.040000e-02

Joint ci ratio: 8.831362e-02	ci left: 9.323983e-03	ci right 1.019031e-02	k: 1950	n:200000
Cons ci ratio: 1.581978e-02	ci left: 2.330284e-01	ci right 2.367492e-01	k: 46977	n:200000
KS ci ratio: 1.453207e-01	ci left: 3.361508e-03	ci right 3.893039e-03	k: 724	n:200000
MAP3K3   200000 perm   52 sec   (3859 perm/sec)   p_kst 3.620000e-03   p_cons 2.348850e-01   p_joint 9.750000e-03

Joint ci ratio: 7.793176e-02	ci left: 1.144059e-02	ci right 1.237296e-02	k: 2499	n:210000
Cons ci ratio: 1.545099e-02	ci left: 2.327842e-01	ci right 2.364136e-01	k: 49265	n:210000
KS ci ratio: 1.419355e-01	ci left: 3.362114e-03	ci right 3.880308e-03	k: 759	n:210000
MAP3K3   210000 perm   55 sec   (3814 perm/sec)   p_kst 3.614286e-03   p_cons 2.345952e-01   p_joint 1.190000e-02

Joint ci ratio: 7.964597e-02	ci left: 1.045693e-02	ci right 1.132875e-02	k: 2395	n:220000
Cons ci ratio: 1.509938e-02	ci left: 2.327399e-01	ci right 2.362853e-01	k: 51592	n:220000
KS ci ratio: 1.386888e-01	ci left: 3.367183e-03	ci right 3.873306e-03	k: 795	n:220000
MAP3K3   220000 perm   58 sec   (3770 perm/sec)   p_kst 3.613636e-03   p_cons 2.345091e-01   p_joint 1.088636e-02

Joint ci ratio: 7.870794e-02	ci left: 1.024942e-02	ci right 1.109341e-02	k: 2453	n:230000
Cons ci ratio: 1.477502e-02	ci left: 2.325962e-01	ci right 2.360627e-01	k: 53895	n:230000
KS ci ratio: 1.358192e-01	ci left: 3.363534e-03	ci right 3.857802e-03	k: 829	n:230000
MAP3K3   230000 perm   62 sec   (3725 perm/sec)   p_kst 3.604348e-03   p_cons 2.343261e-01   p_joint 1.066522e-02

Joint ci ratio: 7.700055e-02	ci left: 1.027178e-02	ci right 1.109844e-02	k: 2563	n:240000
Cons ci ratio: 1.446903e-02	ci left: 2.325068e-01	ci right 2.358996e-01	k: 56208	n:240000
KS ci ratio: 1.333531e-01	ci left: 3.348202e-03	ci right 3.830575e-03	k: 860	n:240000
MAP3K3   240000 perm   65 sec   (3686 perm/sec)   p_kst 3.583333e-03   p_cons 2.342000e-01   p_joint 1.067917e-02

Joint ci ratio: 7.129474e-02	ci left: 1.152183e-02	ci right 1.237754e-02	k: 2986	n:250000
Cons ci ratio: 1.418382e-02	ci left: 2.323615e-01	ci right 2.356847e-01	k: 58505	n:250000
KS ci ratio: 1.306497e-01	ci left: 3.353520e-03	ci right 3.826104e-03	k: 896	n:250000
MAP3K3   250000 perm   69 sec   (3643 perm/sec)   p_kst 3.584000e-03   p_cons 2.340200e-01   p_joint 1.194400e-02

Joint ci ratio: 7.514606e-02	ci left: 9.968297e-03	ci right 1.075037e-02	k: 2692	n:260000
Cons ci ratio: 1.391110e-02	ci left: 2.323238e-01	ci right 2.355821e-01	k: 60827	n:260000
KS ci ratio: 1.272179e-01	ci left: 3.406927e-03	ci right 3.873476e-03	k: 945	n:260000
MAP3K3   260000 perm   72 sec   (3602 perm/sec)   p_kst 3.634615e-03   p_cons 2.339500e-01   p_joint 1.035385e-02

Joint ci ratio: 7.364264e-02	ci left: 1.000257e-02	ci right 1.077096e-02	k: 2803	n:270000
Cons ci ratio: 1.364704e-02	ci left: 2.324595e-01	ci right 2.356573e-01	k: 63195	n:270000
KS ci ratio: 1.248643e-01	ci left: 3.409875e-03	ci right 3.867549e-03	k: 981	n:270000
MAP3K3   270000 perm   76 sec   (3559 perm/sec)   p_kst 3.633333e-03   p_cons 2.340556e-01   p_joint 1.038148e-02

Joint ci ratio: 7.377614e-02	ci left: 9.613714e-03	ci right 1.035362e-02	k: 2794	n:280000
Cons ci ratio: 1.340789e-02	ci left: 2.323081e-01	ci right 2.354474e-01	k: 65485	n:280000
KS ci ratio: 1.232457e-01	ci left: 3.378065e-03	ci right 3.825163e-03	k: 1007	n:280000
MAP3K3   280000 perm   80 sec   (3521 perm/sec)   p_kst 3.596429e-03   p_cons 2.338750e-01   p_joint 9.978571e-03

Joint ci ratio: 6.645730e-02	ci left: 1.146102e-02	ci right 1.225223e-02	k: 3437	n:290000
Cons ci ratio: 1.317403e-02	ci left: 2.323534e-01	ci right 2.354381e-01	k: 67829	n:290000
KS ci ratio: 1.208122e-01	ci left: 3.398646e-03	ci right 3.838951e-03	k: 1048	n:290000
MAP3K3   290000 perm   84 sec   (3472 perm/sec)   p_kst 3.613793e-03   p_cons 2.338931e-01   p_joint 1.185172e-02

Joint ci ratio: 7.428536e-02	ci left: 8.854892e-03	ci right 9.541306e-03	k: 2758	n:300000
Cons ci ratio: 1.295730e-02	ci left: 2.322498e-01	ci right 2.352820e-01	k: 70129	n:300000
KS ci ratio: 1.193443e-01	ci left: 3.369418e-03	ci right 3.800259e-03	k: 1074	n:300000
MAP3K3   300000 perm   87 sec   (3433 perm/sec)   p_kst 3.580000e-03   p_cons 2.337633e-01   p_joint 9.193333e-03

Joint ci ratio: 7.337627e-02	ci left: 8.787711e-03	ci right 9.460224e-03	k: 2827	n:310000
Cons ci ratio: 1.273876e-02	ci left: 2.324944e-01	ci right 2.354783e-01	k: 72535	n:310000
KS ci ratio: 1.170253e-01	ci left: 3.395339e-03	ci right 3.820475e-03	k: 1117	n:310000
MAP3K3   310000 perm   91 sec   (3396 perm/sec)   p_kst 3.603226e-03   p_cons 2.339839e-01   p_joint 9.119355e-03

Joint ci ratio: 7.222349e-02	ci left: 8.792293e-03	ci right 9.454142e-03	k: 2918	n:320000
Cons ci ratio: 1.253484e-02	ci left: 2.326119e-01	ci right 2.355491e-01	k: 74905	n:320000
KS ci ratio: 1.149857e-01	ci left: 3.410609e-03	ci right 3.829709e-03	k: 1157	n:320000
MAP3K3   320000 perm   95 sec   (3359 perm/sec)   p_kst 3.615625e-03   p_cons 2.340781e-01   p_joint 9.118750e-03

Joint ci ratio: 7.624947e-02	ci left: 7.642380e-03	ci right 8.251157e-03	k: 2621	n:330000
Cons ci ratio: 1.234334e-02	ci left: 2.326380e-01	ci right 2.355303e-01	k: 77247	n:330000
KS ci ratio: 1.129545e-01	ci left: 3.430904e-03	ci right 3.844554e-03	k: 1199	n:330000
MAP3K3   330000 perm   99 sec   (3326 perm/sec)   p_kst 3.633333e-03   p_cons 2.340818e-01   p_joint 7.942424e-03

Joint ci ratio: 7.677656e-02	ci left: 7.316586e-03	ci right 7.903618e-03	k: 2586	n:340000
Cons ci ratio: 1.215735e-02	ci left: 2.327509e-01	ci right 2.356007e-01	k: 79619	n:340000
KS ci ratio: 1.113880e-01	ci left: 3.427189e-03	ci right 3.834284e-03	k: 1233	n:340000
MAP3K3   340000 perm   103 sec   (3292 perm/sec)   p_kst 3.626471e-03   p_cons 2.341735e-01   p_joint 7.605882e-03

Joint ci ratio: 7.662104e-02	ci left: 7.138341e-03	ci right 7.709860e-03	k: 2597	n:350000
Cons ci ratio: 1.198011e-02	ci left: 2.328405e-01	ci right 2.356496e-01	k: 81985	n:350000
KS ci ratio: 1.096248e-01	ci left: 3.440398e-03	ci right 3.842175e-03	k: 1273	n:350000
MAP3K3   350000 perm   107 sec   (3256 perm/sec)   p_kst 3.637143e-03   p_cons 2.342429e-01   p_joint 7.420000e-03

Joint ci ratio: 7.541058e-02	ci left: 7.168956e-03	ci right 7.733460e-03	k: 2681	n:360000
Cons ci ratio: 1.181854e-02	ci left: 2.326788e-01	ci right 2.354478e-01	k: 84262	n:360000
KS ci ratio: 1.079016e-01	ci left: 3.455623e-03	ci right 3.852432e-03	k: 1314	n:360000
MAP3K3   360000 perm   112 sec   (3222 perm/sec)   p_kst 3.650000e-03   p_cons 2.340611e-01   p_joint 7.447222e-03

Joint ci ratio: 7.567445e-02	ci left: 6.927438e-03	ci right 7.474917e-03	k: 2663	n:370000
Cons ci ratio: 1.166086e-02	ci left: 2.326015e-01	ci right 2.353324e-01	k: 86567	n:370000
KS ci ratio: 1.065335e-01	ci left: 3.451655e-03	ci right 3.842668e-03	k: 1348	n:370000
MAP3K3   370000 perm   116 sec   (3188 perm/sec)   p_kst 3.643243e-03   p_cons 2.339649e-01   p_joint 7.197297e-03

Joint ci ratio: 7.525611e-02	ci left: 6.822581e-03	ci right 7.358661e-03	k: 2693	n:380000
Cons ci ratio: 1.150351e-02	ci left: 2.327098e-01	ci right 2.354048e-01	k: 88941	n:380000
KS ci ratio: 1.054845e-01	ci left: 3.429989e-03	ci right 3.814484e-03	k: 1375	n:380000
MAP3K3   380000 perm   121 sec   (3151 perm/sec)   p_kst 3.618421e-03   p_cons 2.340553e-01   p_joint 7.086842e-03

Joint ci ratio: 7.467904e-02	ci left: 6.753307e-03	ci right 7.279698e-03	k: 2735	n:390000
Cons ci ratio: 1.135390e-02	ci left: 2.327641e-01	ci right 2.354245e-01	k: 91296	n:390000
KS ci ratio: 1.040941e-01	ci left: 3.434426e-03	ci right 3.814033e-03	k: 1412	n:390000
MAP3K3   390000 perm   125 sec   (3118 perm/sec)   p_kst 3.620513e-03   p_cons 2.340923e-01   p_joint 7.012821e-03

Joint ci ratio: 7.486493e-02	ci left: 6.552557e-03	ci right 7.064627e-03	k: 2722	n:400000
Cons ci ratio: 1.120912e-02	ci left: 2.328434e-01	ci right 2.354705e-01	k: 93662	n:400000
KS ci ratio: 1.030430e-01	ci left: 3.419186e-03	ci right 3.793062e-03	k: 1441	n:400000
MAP3K3   400000 perm   130 sec   (3087 perm/sec)   p_kst 3.602500e-03   p_cons 2.341550e-01   p_joint 6.805000e-03

Joint ci ratio: 7.290260e-02	ci left: 6.747070e-03	ci right 7.259935e-03	k: 2870	n:410000
Cons ci ratio: 1.107125e-02	ci left: 2.328703e-01	ci right 2.354652e-01	k: 96008	n:410000
KS ci ratio: 1.010962e-01	ci left: 3.468894e-03	ci right 3.840614e-03	k: 1497	n:410000
MAP3K3   410000 perm   134 sec   (3053 perm/sec)   p_kst 3.651220e-03   p_cons 2.341659e-01   p_joint 7.000000e-03

Joint ci ratio: 6.978295e-02	ci left: 7.196829e-03	ci right 7.719525e-03	k: 3131	n:420000
Cons ci ratio: 1.093943e-02	ci left: 2.328605e-01	ci right 2.354242e-01	k: 98339	n:420000
KS ci ratio: 1.000011e-01	ci left: 3.462897e-03	ci right 3.829718e-03	k: 1530	n:420000
MAP3K3   420000 perm   139 sec   (3020 perm/sec)   p_kst 3.642857e-03   p_cons 2.341405e-01   p_joint 7.454762e-03

Joint ci ratio: 6.374209e-02	ci left: 8.440601e-03	ci right 8.998607e-03	k: 3748	n:430000
Cons ci ratio: 1.081046e-02	ci left: 2.329093e-01	ci right 2.354431e-01	k: 100695	n:430000
KS ci ratio: 9.868792e-02	ci left: 3.475345e-03	ci right 3.838370e-03	k: 1571	n:430000
MAP3K3   430000 perm   144 sec   (2981 perm/sec)   p_kst 3.653488e-03   p_cons 2.341744e-01   p_joint 8.716279e-03

Outputting figure to mutsig2_images.part000000000102/MAP3K3.4_2042_430000_0.0036535_0.23417_0.0087163.png
                gene_name: MAP3K3
               theta_stop: 0.099 
                    nperm: 430000 
                     p_ks: 0.0037 
        ci_ks_bounds_left: 0.0035 
       ci_ks_bounds_right: 0.0038 
                   p_cons: 0.23 
      ci_cons_bounds_left: 0.23 
     ci_cons_bounds_right: 0.24 
                  p_joint: 0.0087 
     ci_joint_bounds_left: 0.0084 
    ci_joint_bounds_right: 0.0090 

Current progress: 33 percent done.
MARK2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.525594e-02	ci left: 8.617190e-01	ci right 8.750656e-01	k: 8685	n:10000
Cons ci ratio: 3.062734e-02	ci left: 6.113069e-01	ci right 6.304227e-01	k: 6209	n:10000
KS ci ratio: 2.934637e-02	ci left: 6.313068e-01	ci right 6.502111e-01	k: 6408	n:10000
MARK2   10000 perm   1 sec   (6871 perm/sec)   p_kst 6.408000e-01   p_cons 6.209000e-01   p_joint 8.685000e-01

Outputting figure to mutsig2_images.part000000000102/MARK2.2_2443_10000_0.6408_0.6209_0.8685.png
                gene_name: MARK2
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.64 
        ci_ks_bounds_left: 0.63 
       ci_ks_bounds_right: 0.65 
                   p_cons: 0.62 
      ci_cons_bounds_left: 0.61 
     ci_cons_bounds_right: 0.63 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.86 
    ci_joint_bounds_right: 0.88 

Current progress: 67 percent done.
MAST2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.663683e-02	ci left: 8.402009e-01	ci right 8.543961e-01	k: 8474	n:10000
Cons ci ratio: 3.092077e-02	ci left: 6.067866e-01	ci right 6.259455e-01	k: 6164	n:10000
KS ci ratio: 4.764275e-02	ci left: 3.939633e-01	ci right 4.132929e-01	k: 4036	n:10000
MAST2   10000 perm   2 sec   (5497 perm/sec)   p_kst 4.036000e-01   p_cons 6.164000e-01   p_joint 8.474000e-01

Outputting figure to mutsig2_images.part000000000102/MAST2.2_5513_10000_0.4036_0.6164_0.8474.png
                gene_name: MAST2
               theta_stop: 0.048 
                    nperm: 10000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.62 
      ci_cons_bounds_left: 0.61 
     ci_cons_bounds_right: 0.63 
                  p_joint: 0.85 
     ci_joint_bounds_left: 0.84 
    ci_joint_bounds_right: 0.85 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000102
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 102 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1649>
Subject: Job 8704268: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1649>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000103> was used as the working directory.
Started at Thu Nov 15 19:34:25 2012
Results reported at Thu Nov 15 19:37:22 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000103.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000103.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 103  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000103.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    200.91 sec.
    Max Memory :      6010 MB
    Max Swap   :      8474 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
103
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 103
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 103: processing genes 9228 - 9318
Calculating significance of each gene.
Using projection method.
9228	MASTL	1
9229	MAT1A	2.729407e-02
9230	MAT2A	1
9231	MAT2B	1
9232	MATK	1
9233	MATN1	1
9234	MATN2	1
9235	MATN3	1
9236	MATN4	1
9237	MATR3	1
9238	MAVS	1
9239	MAX	1
9240	MAZ	1
9241	MB	1
9242	MBD1	3.127924e-01
9243	MBD2	1
9244	MBD3	1
9245	MBD3L1	1
9246	MBD4	1
9247	MBD5	1
9248	MBD6	3.349551e-02
9249	MBIP	1.495227e-01
9250	MBL2	1
9251	MBLAC1	1
9252	MBLAC2	1
9253	MBNL1	1
9254	MBNL2	1
9255	MBNL3	1.879482e-02
9256	MBOAT1	1
9257	MBOAT2	1.491130e-01
9258	MBOAT7	1
9259	MBP	1
9260	MBTD1	1
In gene MBTPS1 the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 3224    n = 1	mu =   2.44e-07
    THCA-BJ-A28R-TP	categ 6	N = 3216    n = 1	mu =   6.72e-08
9261	MBTPS1	5.029107e-02
9262	MBTPS2	1
9263	MC1R	1
9264	MC2R	1
9265	MC3R	1
9266	MC4R	1
9267	MC5R	1
9268	MCAM	1
9269	MCART1	1
9270	MCART2	1
9271	MCART6	1
9272	MCAT	1
9273	MCC	9.443885e-02
9274	MCCC1	1
9275	MCCC2	1
9276	MCCD1	1
9277	MCEE	1
9278	MCF2	8.732512e-02
9279	MCF2L	3.387104e-02
9280	MCF2L2	1.537945e-01
9281	MCFD2	1
9282	MCHR1	1
9283	MCHR2	1
9284	MCL1	1
9285	MCM10	7.738434e-02
9286	MCM2	1
9287	MCM3	1
9288	MCM3AP	1
9289	MCM4	1
9290	MCM5	1
9291	MCM6	1
9292	MCM7	1
9293	MCM8	1
9294	MCM9	1.559546e-01
9295	MCOLN1	1.571057e-01
9296	MCOLN2	1
9297	MCOLN3	1
9298	MCPH1	2.224516e-01
9299	MCRS1	1
9300	MCTP1	1
9301	MCTP2	2.500726e-01
9302	MCTS1	1
9303	MDC1	1
9304	MDFI	1
9305	MDFIC	1
9306	MDGA1	1
9307	MDGA2	1.296193e-01
9308	MDH1	1
9309	MDH1B	1
9310	MDH2	1
9311	MDK	1
9312	MDM1	1
9313	MDM2	1
9314	MDM4	1
9315	MDN1	9.286915e-01
9316	MDP1	1
9317	ME1	1
9318	ME2	1
Done

Running MutSig 2:
Scatter job 103: processing genes 9228 - 9318
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MDN1
Processing conservation and coverage...
58% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.893634e-02	ci left: 4.934506e-01	ci right 5.131474e-01	k: 5033	n:10000
Cons ci ratio: 3.821876e-02	ci left: 5.027508e-01	ci right 5.224418e-01	k: 5126	n:10000
KS ci ratio: 4.665763e-02	ci left: 4.040236e-01	ci right 4.234267e-01	k: 4137	n:10000
MDN1   10000 perm   4 sec   (2254 perm/sec)   p_kst 4.137000e-01   p_cons 5.126000e-01   p_joint 5.033000e-01

Outputting figure to mutsig2_images.part000000000103/MDN1.4_17199_10000_0.4137_0.5126_0.5033.png
                gene_name: MDN1
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.51 
      ci_cons_bounds_left: 0.50 
     ci_cons_bounds_right: 0.52 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 20 percent done.
MBD6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.852541e-03	ci left: 9.824212e-01	ci right 9.872903e-01	k: 9850	n:10000
Cons ci ratio: 1.957624e-02	ci left: 7.924290e-01	ci right 8.081956e-01	k: 8004	n:10000
KS ci ratio: 2.282482e-02	ci left: 7.381561e-01	ci right 7.553000e-01	k: 7468	n:10000
MBD6   10000 perm   3 sec   (3066 perm/sec)   p_kst 7.468000e-01   p_cons 8.004000e-01   p_joint 9.850000e-01

Outputting figure to mutsig2_images.part000000000103/MBD6.2_3056_10000_0.7468_0.8004_0.985.png
                gene_name: MBD6
               theta_stop: 0.023 
                    nperm: 10000 
                     p_ks: 0.75 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.76 
                   p_cons: 0.80 
      ci_cons_bounds_left: 0.79 
     ci_cons_bounds_right: 0.81 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 40 percent done.
MBTPS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.439852e-01	ci left: 6.401182e-02	ci right 7.404101e-02	k: 689	n:10000
KS ci ratio: 2.051534e-02	ci left: 7.768156e-01	ci right 7.930181e-01	k: 7850	n:10000
MBTPS1   10000 perm   3 sec   (3900 perm/sec)   p_kst 7.850000e-01   p_cons 6.890000e-02   p_joint 1

Joint ci ratio: 1.554656e-02	ci left: 7.547243e-01	ci right 7.665998e-01	k: 15214	n:20000
Cons ci ratio: 1.027783e-01	ci left: 6.430502e-02	ci right 7.132127e-02	k: 1355	n:20000
KS ci ratio: 1.434729e-02	ci left: 7.829755e-01	ci right 7.943404e-01	k: 15774	n:20000
MBTPS1   20000 perm   5 sec   (3725 perm/sec)   p_kst 7.887000e-01   p_cons 6.775000e-02   p_joint 7.607000e-01

Joint ci ratio: 1.306580e-04	ci left: 9.998770e-01	ci right 1	k: 30000	n:30000
Cons ci ratio: 8.268265e-02	ci left: 6.681093e-02	ci right 7.260607e-02	k: 2090	n:30000
KS ci ratio: 1.167580e-02	ci left: 7.851447e-01	ci right 7.943991e-01	k: 23694	n:30000
MBTPS1   30000 perm   8 sec   (3546 perm/sec)   p_kst 7.898000e-01   p_cons 6.966667e-02   p_joint 1

Outputting figure to mutsig2_images.part000000000103/MBTPS1.2_3247_30000_0.7898_0.069667_1.png
                gene_name: MBTPS1
               theta_stop: 0.083 
                    nperm: 30000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.79 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.070 
      ci_cons_bounds_left: 0.067 
     ci_cons_bounds_right: 0.073 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 60 percent done.
MCC
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.288515e-02	ci left: 7.371453e-01	ci right 7.543113e-01	k: 7458	n:10000
KS ci ratio: 2.294549e-02	ci left: 7.361346e-01	ci right 7.533227e-01	k: 7448	n:10000
MCC   10000 perm   2 sec   (5575 perm/sec)   p_kst 7.448000e-01   p_cons 7.458000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000103/MCC.2_3197_10000_0.7448_0.7458_1.png
                gene_name: MCC
               theta_stop: 0.023 
                    nperm: 10000 
                     p_ks: 0.74 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.75 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.75 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 80 percent done.
MCF2L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.265484e-02	ci left: 3.471054e-01	ci right 3.659783e-01	k: 3565	n:10000
Cons ci ratio: 1.749511e-01	ci left: 4.360497e-02	ci right 5.206094e-02	k: 477	n:10000
KS ci ratio: 3.423800e-02	ci left: 5.574207e-01	ci right 5.769402e-01	k: 5672	n:10000
MCF2L   10000 perm   2 sec   (5528 perm/sec)   p_kst 5.672000e-01   p_cons 4.770000e-02   p_joint 3.565000e-01

Joint ci ratio: 6.755281e-02	ci left: 1.392105e-01	ci right 1.489932e-01	k: 2881	n:20000
Cons ci ratio: 1.248824e-01	ci left: 4.401091e-02	ci right 4.992170e-02	k: 938	n:20000
KS ci ratio: 2.437948e-02	ci left: 5.568933e-01	ci right 5.706882e-01	k: 11276	n:20000
MCF2L   20000 perm   4 sec   (4966 perm/sec)   p_kst 5.638000e-01   p_cons 4.690000e-02   p_joint 1.440500e-01

Joint ci ratio: 5.433714e-02	ci left: 1.438016e-01	ci right 1.518668e-01	k: 4434	n:30000
Cons ci ratio: 1.001703e-01	ci left: 4.612881e-02	ci right 5.102575e-02	k: 1456	n:30000
KS ci ratio: 1.991967e-02	ci left: 5.578319e-01	ci right 5.690891e-01	k: 16904	n:30000
MCF2L   30000 perm   6 sec   (4727 perm/sec)   p_kst 5.634667e-01   p_cons 4.853333e-02   p_joint 1.478000e-01

Joint ci ratio: 4.705436e-02	ci left: 1.443599e-01	ci right 1.513413e-01	k: 5913	n:40000
Cons ci ratio: 8.662544e-02	ci left: 4.658653e-02	ci right 5.082930e-02	k: 1947	n:40000
KS ci ratio: 1.723855e-02	ci left: 5.589482e-01	ci right 5.686925e-01	k: 22553	n:40000
MCF2L   40000 perm   9 sec   (4578 perm/sec)   p_kst 5.638250e-01   p_cons 4.867500e-02   p_joint 1.478250e-01

Outputting figure to mutsig2_images.part000000000103/MCF2L.2_3764_40000_0.56383_0.048675_0.14783.png
                gene_name: MCF2L
               theta_stop: 0.087 
                    nperm: 40000 
                     p_ks: 0.56 
        ci_ks_bounds_left: 0.56 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.049 
      ci_cons_bounds_left: 0.047 
     ci_cons_bounds_right: 0.051 
                  p_joint: 0.15 
     ci_joint_bounds_left: 0.14 
    ci_joint_bounds_right: 0.15 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000103
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 103 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1726>
Subject: Job 8704269: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1726>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000104> was used as the working directory.
Started at Thu Nov 15 19:34:27 2012
Results reported at Thu Nov 15 20:53:56 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000104.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000104.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 104  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000104.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   4611.14 sec.
    Max Memory :      5859 MB
    Max Swap   :      8544 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
104
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 104
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 104: processing genes 9319 - 9408
Calculating significance of each gene.
Using projection method.
9319	ME3	1
9320	MEA1	1
9321	MEAF6	1
9322	MECOM	1
9323	MECP2	6.653749e-02
9324	MECR	1
9325	MED1	3.243433e-01
9326	MED10	1
9327	MED11	1
9328	MED12	1
9329	MED12L	1
9330	MED13	3.065195e-01
9331	MED13L	1
9332	MED14	1
9333	MED15	1
9334	MED16	1.816597e-01
9335	MED17	1
9336	MED18	1
9337	MED19	1
9338	MED20	1
9339	MED21	1
9340	MED22	1
9341	MED23	3.615255e-01
9342	MED24	1
9343	MED25	1
9344	MED26	1
9345	MED27	1
9346	MED28	1
9347	MED29	1
9348	MED30	1
9349	MED31	7.751367e-05
9350	MED4	1
9351	MED6	1
9352	MED7	1
9353	MED8	1
In gene MED9 the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 448     n = 1	mu =   1.67e-07
9354	MED9	4.013600e-02
9355	MEF2A	1
9356	MEF2B	1.084415e-01
9357	MEF2C	1
9358	MEF2D	1
9359	MEFV	1.842395e-01
9360	MEGF10	1
In gene MEGF11 the following bins exceed PROBCAP:
    THCA-BJ-A18Z-TP	categ 6	N = 1799    n = 1	mu =   6.95e-08
9361	MEGF11	7.228540e-02
9362	MEGF6	3.082819e-02
9363	MEGF8	1
9364	MEGF9	1
9365	MEI1	1
9366	MEIG1	1
9367	MEIS1	1
9368	MEIS2	1
9369	MEIS3	1
9370	MELK	1
9371	MEMO1	1
In gene MEN1 the following bins exceed PROBCAP:
    THCA-BJ-A0ZE-TP	categ 6	N = 1685    n = 1	mu =   9.96e-08
9372	MEN1	8.849663e-02
In gene MEOX1 the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 5	N = 730     n = 1	mu =   1.70e-07
9373	MEOX1	6.800129e-02
9374	MEOX2	1
9375	MEP1A	2.736861e-01
9376	MEP1B	1
9377	MEPCE	1.331756e-02
9378	MEPE	1
9379	MERTK	1
9380	MESDC1	1
9381	MESDC2	1
9382	MESP2	1
9383	MEST	1
9384	MET	1
9385	METAP1	1
9386	METAP2	1
9387	METRNL	7.375153e-02
9388	METT10D	1
9389	METT11D1	1
9390	METT5D1	1
9391	METTL1	1
9392	METTL10	1
9393	METTL11A	1
9394	METTL12	1
9395	METTL13	1
9396	METTL14	1
9397	METTL2A	1
9398	METTL2B	7.841098e-02
9399	METTL3	1
9400	METTL4	1
9401	METTL5	1
9402	METTL6	1
9403	METTL7A	1
9404	METTL7B	1
9405	METTL8	1
9406	METTL9	1
9407	MEX3A	1
9408	MEX3B	1
Done

Running MutSig 2:
Scatter job 104: processing genes 9319 - 9408
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MED31
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.756597e-02	ci left: 3.075869e-01	ci right 3.259199e-01	k: 3167	n:10000
Cons ci ratio: 2.169017e-02	ci left: 7.571705e-01	ci right 7.738746e-01	k: 7656	n:10000
KS ci ratio: 7.000510e-02	ci left: 2.302732e-01	ci right 2.470793e-01	k: 2386	n:10000
MED31   10000 perm   1 sec   (7512 perm/sec)   p_kst 2.386000e-01   p_cons 7.656000e-01   p_joint 3.167000e-01

Outputting figure to mutsig2_images.part000000000104/MED31.2_412_10000_0.2386_0.7656_0.3167.png
                gene_name: MED31
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.77 
      ci_cons_bounds_left: 0.76 
     ci_cons_bounds_right: 0.77 
                  p_joint: 0.32 
     ci_joint_bounds_left: 0.31 
    ci_joint_bounds_right: 0.33 

Current progress: 33 percent done.
MEGF6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 4.023926e-01	ci left: 7.512676e-03	ci right 1.138119e-02	k: 93	n:10000
KS ci ratio: 1.752551e+00	ci left: 1.089969e-04	ci right 1.023839e-03	k: 4	n:10000
MEGF6   10000 perm   2 sec   (5971 perm/sec)   p_kst 4.000000e-04   p_cons 9.300000e-03   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 2.884389e-01	ci left: 7.830711e-03	ci right 1.051490e-02	k: 182	n:20000
KS ci ratio: 1.011735e+00	ci left: 3.827477e-04	ci right 1.174202e-03	k: 14	n:20000
MEGF6   20000 perm   4 sec   (5361 perm/sec)   p_kst 7.000000e-04   p_cons 9.100000e-03   p_joint 0

Joint ci ratio: 3.919869e+00	ci left: 0	ci right 1.229551e-04	k: 0	n:30000
Cons ci ratio: 2.340103e-01	ci left: 8.182088e-03	ci right 1.038119e-02	k: 277	n:30000
KS ci ratio: 8.551005e-01	ci left: 4.072634e-04	ci right 1.029426e-03	k: 20	n:30000
MEGF6   30000 perm   6 sec   (5150 perm/sec)   p_kst 6.666667e-04   p_cons 9.233333e-03   p_joint 0

Joint ci ratio: 8.763085e-01	ci left: 2.860045e-04	ci right 7.416724e-04	k: 19	n:40000
Cons ci ratio: 2.017461e-01	ci left: 8.406347e-03	ci right 1.031590e-02	k: 373	n:40000
KS ci ratio: 7.276527e-01	ci left: 4.651937e-04	ci right 1.011537e-03	k: 28	n:40000
MEGF6   40000 perm   8 sec   (5018 perm/sec)   p_kst 7.000000e-04   p_cons 9.325000e-03   p_joint 4.750000e-04

Joint ci ratio: 1.131459e+00	ci left: 1.098282e-04	ci right 3.936066e-04	k: 11	n:50000
Cons ci ratio: 1.821264e-01	ci left: 8.343543e-03	ci right 1.003418e-02	k: 458	n:50000
KS ci ratio: 6.530916e-01	ci left: 4.876226e-04	ci right 9.733974e-04	k: 35	n:50000
MEGF6   50000 perm   10 sec   (4905 perm/sec)   p_kst 7.000000e-04   p_cons 9.160000e-03   p_joint 2.200000e-04

Joint ci ratio: 1.181806e+00	ci left: 7.992595e-05	ci right 3.064845e-04	k: 10	n:60000
Cons ci ratio: 2.148658e-01	ci left: 4.923914e-03	ci right 6.124677e-03	k: 330	n:60000
KS ci ratio: 6.274931e-01	ci left: 4.482221e-04	ci right 8.691969e-04	k: 38	n:60000
MEGF6   60000 perm   12 sec   (4808 perm/sec)   p_kst 6.333333e-04   p_cons 5.500000e-03   p_joint 1.666667e-04

Joint ci ratio: 1.181823e+00	ci left: 6.850761e-05	ci right 2.627036e-04	k: 10	n:70000
Cons ci ratio: 1.997525e-01	ci left: 4.924832e-03	ci right 6.031054e-03	k: 382	n:70000
KS ci ratio: 5.656052e-01	ci left: 4.933809e-04	ci right 8.927588e-04	k: 47	n:70000
MEGF6   70000 perm   15 sec   (4709 perm/sec)   p_kst 6.714286e-04   p_cons 5.457143e-03   p_joint 1.428571e-04

Joint ci ratio: 1.306585e+00	ci left: 4.317386e-05	ci right 1.970303e-04	k: 8	n:80000
Cons ci ratio: 1.874368e-01	ci left: 4.927749e-03	ci right 5.958616e-03	k: 434	n:80000
KS ci ratio: 5.434261e-01	ci left: 4.746963e-04	ci right 8.381106e-04	k: 51	n:80000
MEGF6   80000 perm   17 sec   (4620 perm/sec)   p_kst 6.375000e-04   p_cons 5.425000e-03   p_joint 1.000000e-04

Joint ci ratio: 1.239537e+00	ci left: 4.572735e-05	ci right 1.898226e-04	k: 9	n:90000
Cons ci ratio: 1.748191e-01	ci left: 5.069762e-03	ci right 6.051409e-03	k: 499	n:90000
KS ci ratio: 5.145525e-01	ci left: 4.797147e-04	ci right 8.204800e-04	k: 57	n:90000
MEGF6   90000 perm   20 sec   (4547 perm/sec)   p_kst 6.333333e-04   p_cons 5.544444e-03   p_joint 1.000000e-04

Joint ci ratio: 1.131533e+00	ci left: 5.491284e-05	ci right 1.968118e-04	k: 11	n:100000
Cons ci ratio: 1.648891e-01	ci left: 5.156465e-03	ci right 6.092561e-03	k: 561	n:100000
KS ci ratio: 4.976837e-01	ci left: 4.666328e-04	ci right 7.835025e-04	k: 61	n:100000
MEGF6   100000 perm   22 sec   (4478 perm/sec)   p_kst 6.100000e-04   p_cons 5.610000e-03   p_joint 1.100000e-04

Joint ci ratio: 1.181860e+00	ci left: 4.359528e-05	ci right 1.671787e-04	k: 10	n:110000
Cons ci ratio: 1.572412e-01	ci left: 5.176278e-03	ci right 6.068274e-03	k: 617	n:110000
KS ci ratio: 4.823717e-01	ci left: 4.560798e-04	ci right 7.531010e-04	k: 65	n:110000
MEGF6   110000 perm   25 sec   (4413 perm/sec)   p_kst 5.909091e-04   p_cons 5.609091e-03   p_joint 9.090909e-05

Joint ci ratio: 3.532718e-01	ci left: 8.443495e-04	ci right 1.213782e-03	k: 122	n:120000
Cons ci ratio: 1.151399e-01	ci left: 9.015537e-03	ci right 1.012502e-02	k: 1147	n:120000
KS ci ratio: 4.650788e-01	ci left: 4.547643e-04	ci right 7.369499e-04	k: 70	n:120000
MEGF6   120000 perm   28 sec   (4344 perm/sec)   p_kst 5.833333e-04   p_cons 9.558333e-03   p_joint 1.016667e-03

Joint ci ratio: 4.130596e-01	ci left: 5.498373e-04	ci right 8.424116e-04	k: 89	n:130000
Cons ci ratio: 1.109688e-01	ci left: 8.979808e-03	ci right 1.004224e-02	k: 1235	n:130000
KS ci ratio: 4.381328e-01	ci left: 4.811443e-04	ci right 7.573092e-04	k: 79	n:130000
MEGF6   130000 perm   30 sec   (4275 perm/sec)   p_kst 6.076923e-04   p_cons 9.500000e-03   p_joint 6.846154e-04

Joint ci ratio: 3.116813e-01	ci left: 9.529494e-04	ci right 1.311086e-03	k: 157	n:140000
Cons ci ratio: 1.072203e-01	ci left: 8.949807e-03	ci right 9.970665e-03	k: 1323	n:140000
KS ci ratio: 4.177406e-01	ci left: 4.977678e-04	ci right 7.664742e-04	k: 87	n:140000
MEGF6   140000 perm   33 sec   (4212 perm/sec)   p_kst 6.214286e-04   p_cons 9.450000e-03   p_joint 1.121429e-03

Joint ci ratio: 2.987248e-01	ci left: 9.756106e-04	ci right 1.324134e-03	k: 171	n:150000
Cons ci ratio: 1.034953e-01	ci left: 8.982788e-03	ci right 9.969645e-03	k: 1420	n:150000
KS ci ratio: 3.958491e-01	ci left: 5.244334e-04	ci right 7.888224e-04	k: 97	n:150000
MEGF6   150000 perm   36 sec   (4150 perm/sec)   p_kst 6.466667e-04   p_cons 9.466667e-03   p_joint 1.140000e-03

Joint ci ratio: 2.842169e-01	ci left: 1.018919e-03	ci right 1.362068e-03	k: 189	n:160000
Cons ci ratio: 9.993417e-02	ci left: 9.048754e-03	ci right 1.000664e-02	k: 1523	n:160000
KS ci ratio: 3.719397e-01	ci left: 5.650742e-04	ci right 8.285649e-04	k: 110	n:160000
MEGF6   160000 perm   39 sec   (4090 perm/sec)   p_kst 6.875000e-04   p_cons 9.518750e-03   p_joint 1.181250e-03

Joint ci ratio: 3.335561e-01	ci left: 6.766331e-04	ci right 9.526148e-04	k: 137	n:170000
Cons ci ratio: 9.692774e-02	ci left: 9.067284e-03	ci right 9.996617e-03	k: 1619	n:170000
KS ci ratio: 3.592190e-01	ci left: 5.745722e-04	ci right 8.311873e-04	k: 118	n:170000
MEGF6   170000 perm   42 sec   (4034 perm/sec)   p_kst 6.941176e-04   p_cons 9.523529e-03   p_joint 8.058824e-04

Joint ci ratio: 3.220886e-01	ci left: 6.900282e-04	ci right 9.598011e-04	k: 147	n:180000
Cons ci ratio: 9.379177e-02	ci left: 9.160104e-03	ci right 1.006691e-02	k: 1729	n:180000
KS ci ratio: 3.423664e-01	ci left: 6.034489e-04	ci right 8.575222e-04	k: 130	n:180000
MEGF6   180000 perm   45 sec   (3977 perm/sec)   p_kst 7.222222e-04   p_cons 9.605556e-03   p_joint 8.166667e-04

Joint ci ratio: 3.463647e-01	ci left: 5.572620e-04	ci right 7.952438e-04	k: 127	n:190000
Cons ci ratio: 9.136883e-02	ci left: 9.156133e-03	ci right 1.003787e-02	k: 1822	n:190000
KS ci ratio: 3.300002e-01	ci left: 6.198797e-04	ci right 8.694449e-04	k: 140	n:190000
MEGF6   190000 perm   48 sec   (3923 perm/sec)   p_kst 7.368421e-04   p_cons 9.589474e-03   p_joint 6.684211e-04

Joint ci ratio: 3.323737e-01	ci left: 5.797151e-04	ci right 8.151476e-04	k: 138	n:200000
Cons ci ratio: 8.879749e-02	ci left: 9.221287e-03	ci right 1.008301e-02	k: 1929	n:200000
KS ci ratio: 3.231965e-01	ci left: 6.164263e-04	ci right 8.584240e-04	k: 146	n:200000
MEGF6   200000 perm   52 sec   (3869 perm/sec)   p_kst 7.300000e-04   p_cons 9.645000e-03   p_joint 6.900000e-04

Joint ci ratio: 3.199516e-01	ci left: 6.002045e-04	ci right 8.329830e-04	k: 149	n:210000
Cons ci ratio: 8.675480e-02	ci left: 9.210655e-03	ci right 1.005058e-02	k: 2021	n:210000
KS ci ratio: 3.088201e-01	ci left: 6.484567e-04	ci right 8.894782e-04	k: 160	n:210000
MEGF6   210000 perm   55 sec   (3817 perm/sec)   p_kst 7.619048e-04   p_cons 9.623810e-03   p_joint 7.095238e-04

Joint ci ratio: 3.623069e-01	ci left: 4.357146e-04	ci right 6.323802e-04	k: 116	n:220000
Cons ci ratio: 8.482664e-02	ci left: 9.205645e-03	ci right 1.002554e-02	k: 2114	n:220000
KS ci ratio: 2.987797e-01	ci left: 6.651723e-04	ci right 9.028449e-04	k: 171	n:220000
MEGF6   220000 perm   58 sec   (3768 perm/sec)   p_kst 7.772727e-04   p_cons 9.609091e-03   p_joint 5.272727e-04

Joint ci ratio: 3.670498e-01	ci left: 4.049209e-04	ci right 5.906540e-04	k: 113	n:230000
Cons ci ratio: 8.313569e-02	ci left: 9.175710e-03	ci right 9.975853e-03	k: 2201	n:230000
KS ci ratio: 2.880876e-01	ci left: 6.886160e-04	ci right 9.242580e-04	k: 184	n:230000
MEGF6   230000 perm   62 sec   (3718 perm/sec)   p_kst 8.000000e-04   p_cons 9.569565e-03   p_joint 4.913043e-04

Joint ci ratio: 3.533632e-01	ci left: 4.221574e-04	ci right 6.069208e-04	k: 122	n:240000
Cons ci ratio: 8.109605e-02	ci left: 9.250487e-03	ci right 1.003642e-02	k: 2313	n:240000
KS ci ratio: 2.827879e-01	ci left: 6.870026e-04	ci right 9.169963e-04	k: 191	n:240000
MEGF6   240000 perm   65 sec   (3669 perm/sec)   p_kst 7.958333e-04   p_cons 9.637500e-03   p_joint 5.083333e-04

Joint ci ratio: 3.450470e-01	ci left: 4.271666e-04	ci right 6.087402e-04	k: 128	n:250000
Cons ci ratio: 7.956458e-02	ci left: 9.233232e-03	ci right 1.000220e-02	k: 2403	n:250000
KS ci ratio: 2.723455e-01	ci left: 7.153495e-04	ci right 9.444785e-04	k: 206	n:250000
MEGF6   250000 perm   69 sec   (3621 perm/sec)   p_kst 8.240000e-04   p_cons 9.612000e-03   p_joint 5.120000e-04

Joint ci ratio: 3.312106e-01	ci left: 4.494552e-04	ci right 6.312109e-04	k: 139	n:260000
Cons ci ratio: 7.786493e-02	ci left: 9.277783e-03	ci right 1.003321e-02	k: 2509	n:260000
KS ci ratio: 2.703959e-01	ci left: 6.985887e-04	ci right 9.204753e-04	k: 209	n:260000
MEGF6   260000 perm   73 sec   (3579 perm/sec)   p_kst 8.038462e-04   p_cons 9.650000e-03   p_joint 5.346154e-04

Joint ci ratio: 3.300367e-01	ci left: 4.362045e-04	ci right 6.118436e-04	k: 140	n:270000
Cons ci ratio: 7.613759e-02	ci left: 9.351899e-03	ci right 1.009572e-02	k: 2624	n:270000
KS ci ratio: 2.635793e-01	ci left: 7.107300e-04	ci right 9.298437e-04	k: 220	n:270000
MEGF6   270000 perm   77 sec   (3527 perm/sec)   p_kst 8.148148e-04   p_cons 9.718519e-03   p_joint 5.185185e-04

Joint ci ratio: 1.986134e-01	ci left: 1.251328e-03	ci right 1.530585e-03	k: 388	n:280000
Cons ci ratio: 7.481036e-02	ci left: 9.347280e-03	ci right 1.007721e-02	k: 2718	n:280000
KS ci ratio: 2.578102e-01	ci left: 7.187280e-04	ci right 9.346771e-04	k: 230	n:280000
MEGF6   280000 perm   80 sec   (3484 perm/sec)   p_kst 8.214286e-04   p_cons 9.707143e-03   p_joint 1.385714e-03

Joint ci ratio: 1.968525e-01	ci left: 1.231120e-03	ci right 1.503139e-03	k: 395	n:290000
Cons ci ratio: 7.337917e-02	ci left: 9.387096e-03	ci right 1.010551e-02	k: 2825	n:290000
KS ci ratio: 2.561546e-01	ci left: 7.036221e-04	ci right 9.134577e-04	k: 233	n:290000
MEGF6   290000 perm   84 sec   (3442 perm/sec)   p_kst 8.034483e-04   p_cons 9.741379e-03   p_joint 1.362069e-03

Joint ci ratio: 1.941750e-01	ci left: 1.224954e-03	ci right 1.491494e-03	k: 406	n:300000
Cons ci ratio: 7.216388e-02	ci left: 9.388369e-03	ci right 1.009448e-02	k: 2921	n:300000
KS ci ratio: 2.518851e-01	ci left: 7.051372e-04	ci right 9.113698e-04	k: 241	n:300000
MEGF6   300000 perm   88 sec   (3401 perm/sec)   p_kst 8.033333e-04   p_cons 9.736667e-03   p_joint 1.353333e-03

Joint ci ratio: 1.844510e-01	ci left: 1.320659e-03	ci right 1.592024e-03	k: 450	n:310000
Cons ci ratio: 7.105460e-02	ci left: 9.376977e-03	ci right 1.007094e-02	k: 3013	n:310000
KS ci ratio: 2.473276e-01	ci left: 7.096074e-04	ci right 9.128150e-04	k: 250	n:310000
MEGF6   310000 perm   92 sec   (3358 perm/sec)   p_kst 8.064516e-04   p_cons 9.719355e-03   p_joint 1.451613e-03

Joint ci ratio: 1.865377e-01	ci left: 1.249585e-03	ci right 1.509580e-03	k: 440	n:320000
Cons ci ratio: 6.999495e-02	ci left: 9.366374e-03	ci right 1.004880e-02	k: 3105	n:320000
KS ci ratio: 2.430089e-01	ci left: 7.138297e-04	ci right 9.141387e-04	k: 259	n:320000
MEGF6   320000 perm   96 sec   (3319 perm/sec)   p_kst 8.093750e-04   p_cons 9.703125e-03   p_joint 1.375000e-03

Joint ci ratio: 1.786060e-01	ci left: 1.327398e-03	ci right 1.590572e-03	k: 480	n:330000
Cons ci ratio: 6.886184e-02	ci left: 9.389250e-03	ci right 1.006183e-02	k: 3208	n:330000
KS ci ratio: 2.393545e-01	ci left: 7.149760e-04	ci right 9.121420e-04	k: 267	n:330000
MEGF6   330000 perm   101 sec   (3281 perm/sec)   p_kst 8.090909e-04   p_cons 9.721212e-03   p_joint 1.454545e-03

Joint ci ratio: 1.755305e-01	ci left: 1.336142e-03	ci right 1.596004e-03	k: 497	n:340000
Cons ci ratio: 6.789599e-02	ci left: 9.379055e-03	ci right 1.004111e-02	k: 3300	n:340000
KS ci ratio: 2.350095e-01	ci left: 7.216118e-04	ci right 9.164702e-04	k: 277	n:340000
MEGF6   340000 perm   105 sec   (3235 perm/sec)   p_kst 8.147059e-04   p_cons 9.705882e-03   p_joint 1.461765e-03

Joint ci ratio: 1.734538e-01	ci left: 1.330754e-03	ci right 1.586186e-03	k: 509	n:350000
Cons ci ratio: 6.690002e-02	ci left: 9.389174e-03	ci right 1.004184e-02	k: 3399	n:350000
KS ci ratio: 2.329253e-01	ci left: 7.144423e-04	ci right 9.054074e-04	k: 282	n:350000
MEGF6   350000 perm   109 sec   (3198 perm/sec)   p_kst 8.057143e-04   p_cons 9.711429e-03   p_joint 1.454286e-03

Joint ci ratio: 1.712848e-01	ci left: 1.328342e-03	ci right 1.579793e-03	k: 522	n:360000
Cons ci ratio: 6.601335e-02	ci left: 9.379671e-03	ci right 1.002270e-02	k: 3491	n:360000
KS ci ratio: 2.300973e-01	ci left: 7.129134e-04	ci right 9.008275e-04	k: 289	n:360000
MEGF6   360000 perm   114 sec   (3162 perm/sec)   p_kst 8.027778e-04   p_cons 9.697222e-03   p_joint 1.450000e-03

Joint ci ratio: 1.691953e-01	ci left: 1.326079e-03	ci right 1.573726e-03	k: 535	n:370000
Cons ci ratio: 6.522537e-02	ci left: 9.352122e-03	ci right 9.985323e-03	k: 3576	n:370000
KS ci ratio: 2.262292e-01	ci left: 7.191281e-04	ci right 9.050496e-04	k: 299	n:370000
MEGF6   370000 perm   118 sec   (3129 perm/sec)   p_kst 8.081081e-04   p_cons 9.664865e-03   p_joint 1.445946e-03

Joint ci ratio: 1.671804e-01	ci left: 1.323952e-03	ci right 1.567962e-03	k: 548	n:380000
Cons ci ratio: 6.441168e-02	ci left: 9.341604e-03	ci right 9.965908e-03	k: 3667	n:380000
KS ci ratio: 2.236355e-01	ci left: 7.175868e-04	ci right 9.006898e-04	k: 306	n:380000
MEGF6   380000 perm   123 sec   (3095 perm/sec)   p_kst 8.052632e-04   p_cons 9.650000e-03   p_joint 1.442105e-03

Joint ci ratio: 1.637830e-01	ci left: 1.346538e-03	ci right 1.589171e-03	k: 571	n:390000
Cons ci ratio: 6.352540e-02	ci left: 9.361956e-03	ci right 9.978695e-03	k: 3770	n:390000
KS ci ratio: 2.193878e-01	ci left: 7.282498e-04	ci right 9.100682e-04	k: 318	n:390000
MEGF6   390000 perm   127 sec   (3062 perm/sec)   p_kst 8.153846e-04   p_cons 9.666667e-03   p_joint 1.464103e-03

Joint ci ratio: 1.623708e-01	ci left: 1.336854e-03	ci right 1.575462e-03	k: 581	n:400000
Cons ci ratio: 6.276476e-02	ci left: 9.354275e-03	ci right 9.962860e-03	k: 3862	n:400000
KS ci ratio: 2.180263e-01	ci left: 7.194954e-04	ci right 8.978639e-04	k: 322	n:400000
MEGF6   400000 perm   132 sec   (3031 perm/sec)   p_kst 8.050000e-04   p_cons 9.655000e-03   p_joint 1.452500e-03

Joint ci ratio: 1.597827e-01	ci left: 1.348722e-03	ci right 1.585243e-03	k: 600	n:410000
Cons ci ratio: 6.196756e-02	ci left: 9.366222e-03	ci right 9.967567e-03	k: 3962	n:410000
KS ci ratio: 2.153754e-01	ci left: 7.204000e-04	ci right 8.965343e-04	k: 330	n:410000
MEGF6   410000 perm   137 sec   (3000 perm/sec)   p_kst 8.048780e-04   p_cons 9.663415e-03   p_joint 1.463415e-03

Joint ci ratio: 1.580825e-01	ci left: 1.346331e-03	ci right 1.579681e-03	k: 613	n:420000
Cons ci ratio: 6.110892e-02	ci left: 9.405786e-03	ci right 1.000101e-02	k: 4074	n:420000
KS ci ratio: 2.128190e-01	ci left: 7.212740e-04	ci right 8.952556e-04	k: 338	n:420000
MEGF6   420000 perm   141 sec   (2970 perm/sec)   p_kst 8.047619e-04   p_cons 9.700000e-03   p_joint 1.459524e-03

Joint ci ratio: 1.561861e-01	ci left: 1.348533e-03	ci right 1.579199e-03	k: 628	n:430000
Cons ci ratio: 6.042361e-02	ci left: 9.400038e-03	ci right 9.987992e-03	k: 4167	n:430000
KS ci ratio: 2.094473e-01	ci left: 7.287294e-04	ci right 9.013673e-04	k: 349	n:430000
MEGF6   430000 perm   146 sec   (2940 perm/sec)   p_kst 8.116279e-04   p_cons 9.690698e-03   p_joint 1.460465e-03

Joint ci ratio: 1.552034e-01	ci left: 1.335357e-03	ci right 1.562198e-03	k: 636	n:440000
Cons ci ratio: 5.980337e-02	ci left: 9.381153e-03	ci right 9.961695e-03	k: 4254	n:440000
KS ci ratio: 2.076753e-01	ci left: 7.250914e-04	ci right 8.952294e-04	k: 355	n:440000
MEGF6   440000 perm   151 sec   (2909 perm/sec)   p_kst 8.068182e-04   p_cons 9.668182e-03   p_joint 1.445455e-03

Joint ci ratio: 1.529385e-01	ci left: 1.346278e-03	ci right 1.571331e-03	k: 655	n:450000
Cons ci ratio: 5.916746e-02	ci left: 9.374086e-03	ci right 9.947810e-03	k: 4346	n:450000
KS ci ratio: 2.053805e-01	ci left: 7.258367e-04	ci right 8.940313e-04	k: 363	n:450000
MEGF6   450000 perm   156 sec   (2880 perm/sec)   p_kst 8.066667e-04   p_cons 9.657778e-03   p_joint 1.455556e-03

Joint ci ratio: 1.513323e-01	ci left: 1.346287e-03	ci right 1.568764e-03	k: 669	n:460000
Cons ci ratio: 5.855141e-02	ci left: 9.367357e-03	ci right 9.934497e-03	k: 4438	n:460000
KS ci ratio: 2.026157e-01	ci left: 7.306865e-04	ci right 8.974437e-04	k: 373	n:460000
MEGF6   460000 perm   161 sec   (2850 perm/sec)   p_kst 8.108696e-04   p_cons 9.647826e-03   p_joint 1.454348e-03

Joint ci ratio: 1.491221e-01	ci left: 1.358597e-03	ci right 1.579537e-03	k: 689	n:470000
Cons ci ratio: 5.796067e-02	ci left: 9.358847e-03	ci right 9.919564e-03	k: 4529	n:470000
KS ci ratio: 1.996996e-01	ci left: 7.373657e-04	ci right 9.029303e-04	k: 384	n:470000
MEGF6   470000 perm   167 sec   (2823 perm/sec)   p_kst 8.170213e-04   p_cons 9.636170e-03   p_joint 1.465957e-03

Joint ci ratio: 1.475271e-01	ci left: 1.360383e-03	ci right 1.579039e-03	k: 704	n:480000
Cons ci ratio: 5.731237e-02	ci left: 9.375364e-03	ci right 9.930579e-03	k: 4632	n:480000
KS ci ratio: 1.979088e-01	ci left: 7.358613e-04	ci right 8.994277e-04	k: 391	n:480000
MEGF6   480000 perm   172 sec   (2795 perm/sec)   p_kst 8.145833e-04   p_cons 9.650000e-03   p_joint 1.466667e-03

Joint ci ratio: 1.458808e-01	ci left: 1.364075e-03	ci right 1.580664e-03	k: 720	n:490000
Cons ci ratio: 5.682484e-02	ci left: 9.344961e-03	ci right 9.893514e-03	k: 4712	n:490000
KS ci ratio: 1.956751e-01	ci left: 7.383062e-04	ci right 9.003431e-04	k: 400	n:490000
MEGF6   490000 perm   177 sec   (2768 perm/sec)   p_kst 8.163265e-04   p_cons 9.616327e-03   p_joint 1.469388e-03

Joint ci ratio: 1.442885e-01	ci left: 1.367632e-03	ci right 1.582211e-03	k: 736	n:500000
Cons ci ratio: 5.621940e-02	ci left: 9.359180e-03	ci right 9.902525e-03	k: 4814	n:500000
KS ci ratio: 1.932797e-01	ci left: 7.425665e-04	ci right 9.033086e-04	k: 410	n:500000
MEGF6   500000 perm   182 sec   (2741 perm/sec)   p_kst 8.200000e-04   p_cons 9.628000e-03   p_joint 1.472000e-03

Joint ci ratio: 1.432241e-01	ci left: 1.361608e-03	ci right 1.573532e-03	k: 747	n:510000
Cons ci ratio: 5.566722e-02	ci left: 9.361269e-03	ci right 9.899225e-03	k: 4910	n:510000
KS ci ratio: 1.914257e-01	ci left: 7.429373e-04	ci right 9.020374e-04	k: 418	n:510000
MEGF6   510000 perm   188 sec   (2715 perm/sec)   p_kst 8.196078e-04   p_cons 9.627451e-03   p_joint 1.464706e-03

Joint ci ratio: 1.419957e-01	ci left: 1.359531e-03	ci right 1.569163e-03	k: 760	n:520000
Cons ci ratio: 5.515881e-02	ci left: 9.353819e-03	ci right 9.886281e-03	k: 5001	n:520000
KS ci ratio: 1.896240e-01	ci left: 7.433008e-04	ci right 9.008081e-04	k: 426	n:520000
MEGF6   520000 perm   193 sec   (2691 perm/sec)   p_kst 8.192308e-04   p_cons 9.617308e-03   p_joint 1.461538e-03

Joint ci ratio: 1.407984e-01	ci left: 1.357540e-03	ci right 1.564952e-03	k: 773	n:530000
Cons ci ratio: 5.466950e-02	ci left: 9.344810e-03	ci right 9.871892e-03	k: 5091	n:530000
KS ci ratio: 1.874415e-01	ci left: 7.472539e-04	ci right 9.035689e-04	k: 436	n:530000
MEGF6   530000 perm   199 sec   (2667 perm/sec)   p_kst 8.226415e-04   p_cons 9.605660e-03   p_joint 1.458491e-03

Joint ci ratio: 1.391888e-01	ci left: 1.364567e-03	ci right 1.570471e-03	k: 791	n:540000
Cons ci ratio: 5.416661e-02	ci left: 9.345290e-03	ci right 9.867399e-03	k: 5186	n:540000
KS ci ratio: 1.853327e-01	ci left: 7.510704e-04	ci right 9.062176e-04	k: 446	n:540000
MEGF6   540000 perm   204 sec   (2644 perm/sec)   p_kst 8.259259e-04   p_cons 9.603704e-03   p_joint 1.464815e-03

Joint ci ratio: 1.376332e-01	ci left: 1.371351e-03	ci right 1.575777e-03	k: 809	n:550000
Cons ci ratio: 5.364146e-02	ci left: 9.358333e-03	ci right 9.875944e-03	k: 5288	n:550000
KS ci ratio: 1.836962e-01	ci left: 7.512882e-04	ci right 9.049575e-04	k: 454	n:550000
MEGF6   550000 perm   210 sec   (2621 perm/sec)   p_kst 8.254545e-04   p_cons 9.614545e-03   p_joint 1.470909e-03

Joint ci ratio: 1.367085e-01	ci left: 1.365831e-03	ci right 1.567955e-03	k: 820	n:560000
Cons ci ratio: 5.317115e-02	ci left: 9.356835e-03	ci right 9.869686e-03	k: 5382	n:560000
KS ci ratio: 1.822995e-01	ci left: 7.497997e-04	ci right 9.018696e-04	k: 461	n:560000
MEGF6   560000 perm   216 sec   (2598 perm/sec)   p_kst 8.232143e-04   p_cons 9.610714e-03   p_joint 1.464286e-03

Joint ci ratio: 1.354765e-01	ci left: 1.367289e-03	ci right 1.567658e-03	k: 835	n:570000
Cons ci ratio: 5.264510e-02	ci left: 9.379650e-03	ci right 9.888511e-03	k: 5490	n:570000
KS ci ratio: 1.809341e-01	ci left: 7.483677e-04	ci right 8.988858e-04	k: 468	n:570000
MEGF6   570000 perm   221 sec   (2575 perm/sec)   p_kst 8.210526e-04   p_cons 9.631579e-03   p_joint 1.464912e-03

Joint ci ratio: 1.347537e-01	ci left: 1.358707e-03	ci right 1.556671e-03	k: 844	n:580000
Cons ci ratio: 5.222864e-02	ci left: 9.367665e-03	ci right 9.871734e-03	k: 5578	n:580000
KS ci ratio: 1.801681e-01	ci left: 7.420494e-04	ci right 8.905960e-04	k: 472	n:580000
MEGF6   580000 perm   227 sec   (2552 perm/sec)   p_kst 8.137931e-04   p_cons 9.617241e-03   p_joint 1.455172e-03

Joint ci ratio: 1.337291e-01	ci left: 1.356972e-03	ci right 1.553060e-03	k: 857	n:590000
Cons ci ratio: 5.177119e-02	ci left: 9.374507e-03	ci right 9.874394e-03	k: 5677	n:590000
KS ci ratio: 1.784780e-01	ci left: 7.440419e-04	ci right 8.914393e-04	k: 481	n:590000
MEGF6   590000 perm   233 sec   (2531 perm/sec)   p_kst 8.152542e-04   p_cons 9.622034e-03   p_joint 1.452542e-03

Joint ci ratio: 1.325752e-01	ci left: 1.358523e-03	ci right 1.553008e-03	k: 872	n:600000
Cons ci ratio: 5.133004e-02	ci left: 9.379493e-03	ci right 9.875259e-03	k: 5775	n:600000
KS ci ratio: 1.771961e-01	ci left: 7.427886e-04	ci right 8.887675e-04	k: 488	n:600000
MEGF6   600000 perm   239 sec   (2511 perm/sec)   p_kst 8.133333e-04   p_cons 9.625000e-03   p_joint 1.453333e-03

Joint ci ratio: 1.319726e-01	ci left: 1.348933e-03	ci right 1.541098e-03	k: 880	n:610000
Cons ci ratio: 5.095694e-02	ci left: 9.363292e-03	ci right 9.854497e-03	k: 5860	n:610000
KS ci ratio: 1.761193e-01	ci left: 7.400127e-04	ci right 8.844682e-04	k: 494	n:610000
MEGF6   610000 perm   245 sec   (2490 perm/sec)   p_kst 8.098361e-04   p_cons 9.606557e-03   p_joint 1.442623e-03

Joint ci ratio: 1.308632e-01	ci left: 1.350574e-03	ci right 1.541230e-03	k: 895	n:620000
Cons ci ratio: 5.057899e-02	ci left: 9.352403e-03	ci right 9.839292e-03	k: 5948	n:620000
KS ci ratio: 1.743665e-01	ci left: 7.434988e-04	ci right 8.870382e-04	k: 504	n:620000
MEGF6   620000 perm   251 sec   (2469 perm/sec)   p_kst 8.129032e-04   p_cons 9.593548e-03   p_joint 1.443548e-03

Joint ci ratio: 1.295679e-01	ci left: 1.356777e-03	ci right 1.546268e-03	k: 913	n:630000
Cons ci ratio: 5.017576e-02	ci left: 9.354414e-03	ci right 9.837413e-03	k: 6044	n:630000
KS ci ratio: 1.724976e-01	ci left: 7.483998e-04	ci right 8.911755e-04	k: 515	n:630000
MEGF6   630000 perm   257 sec   (2447 perm/sec)   p_kst 8.174603e-04   p_cons 9.593651e-03   p_joint 1.449206e-03

Joint ci ratio: 1.285869e-01	ci left: 1.356746e-03	ci right 1.544688e-03	k: 927	n:640000
Cons ci ratio: 4.978202e-02	ci left: 9.356377e-03	ci right 9.835578e-03	k: 6140	n:640000
KS ci ratio: 1.711757e-01	ci left: 7.486684e-04	ci right 8.902880e-04	k: 523	n:640000
MEGF6   640000 perm   264 sec   (2426 perm/sec)   p_kst 8.171875e-04   p_cons 9.593750e-03   p_joint 1.448438e-03

Joint ci ratio: 1.270885e-01	ci left: 1.368637e-03	ci right 1.555851e-03	k: 949	n:650000
Cons ci ratio: 4.938143e-02	ci left: 9.364372e-03	ci right 9.840014e-03	k: 6240	n:650000
KS ci ratio: 1.683081e-01	ci left: 7.636669e-04	ci right 9.054582e-04	k: 541	n:650000
MEGF6   650000 perm   270 sec   (2407 perm/sec)   p_kst 8.323077e-04   p_cons 9.600000e-03   p_joint 1.460000e-03

Joint ci ratio: 1.262279e-01	ci left: 1.366973e-03	ci right 1.552598e-03	k: 962	n:660000
Cons ci ratio: 4.897475e-02	ci left: 9.378128e-03	ci right 9.850434e-03	k: 6344	n:660000
KS ci ratio: 1.673844e-01	ci left: 7.608051e-04	ci right 9.012117e-04	k: 547	n:660000
MEGF6   660000 perm   276 sec   (2387 perm/sec)   p_kst 8.287879e-04   p_cons 9.612121e-03   p_joint 1.457576e-03

Joint ci ratio: 1.253846e-01	ci left: 1.365363e-03	ci right 1.549439e-03	k: 975	n:670000
Cons ci ratio: 4.855137e-02	ci left: 9.401810e-03	ci right 9.871101e-03	k: 6455	n:670000
KS ci ratio: 1.667774e-01	ci left: 7.551701e-04	ci right 8.939806e-04	k: 551	n:670000
MEGF6   670000 perm   283 sec   (2368 perm/sec)   p_kst 8.223881e-04   p_cons 9.634328e-03   p_joint 1.455224e-03

Joint ci ratio: 1.243065e-01	ci left: 1.369504e-03	ci right 1.552433e-03	k: 992	n:680000
Cons ci ratio: 4.818324e-02	ci left: 9.407376e-03	ci right 9.873286e-03	k: 6554	n:680000
KS ci ratio: 1.645558e-01	ci left: 7.652093e-04	ci right 9.038059e-04	k: 566	n:680000
MEGF6   680000 perm   290 sec   (2346 perm/sec)   p_kst 8.323529e-04   p_cons 9.638235e-03   p_joint 1.458824e-03

Joint ci ratio: 1.236857e-01	ci left: 1.363699e-03	ci right 1.544876e-03	k: 1002	n:690000
Cons ci ratio: 4.779436e-02	ci left: 9.424251e-03	ci right 9.887126e-03	k: 6661	n:690000
KS ci ratio: 1.634071e-01	ci left: 7.652377e-04	ci right 9.027769e-04	k: 574	n:690000
MEGF6   690000 perm   296 sec   (2328 perm/sec)   p_kst 8.318841e-04   p_cons 9.653623e-03   p_joint 1.452174e-03

Joint ci ratio: 1.231959e-01	ci left: 1.355293e-03	ci right 1.534588e-03	k: 1010	n:700000
Cons ci ratio: 4.744661e-02	ci left: 9.427952e-03	ci right 9.887548e-03	k: 6759	n:700000
KS ci ratio: 1.628421e-01	ci left: 7.597866e-04	ci right 8.958277e-04	k: 578	n:700000
MEGF6   700000 perm   303 sec   (2310 perm/sec)   p_kst 8.257143e-04   p_cons 9.655714e-03   p_joint 1.442857e-03

Joint ci ratio: 1.221133e-01	ci left: 1.360778e-03	ci right 1.539104e-03	k: 1028	n:710000
Cons ci ratio: 4.704750e-02	ci left: 9.455226e-03	ci right 9.912168e-03	k: 6874	n:710000
KS ci ratio: 1.617287e-01	ci left: 7.598954e-04	ci right 8.949352e-04	k: 586	n:710000
MEGF6   710000 perm   310 sec   (2287 perm/sec)   p_kst 8.253521e-04   p_cons 9.681690e-03   p_joint 1.447887e-03

Joint ci ratio: 1.215247e-01	ci left: 1.355344e-03	ci right 1.532039e-03	k: 1038	n:720000
Cons ci ratio: 4.672922e-02	ci left: 9.452928e-03	ci right 9.906586e-03	k: 6968	n:720000
KS ci ratio: 1.611809e-01	ci left: 7.546722e-04	ci right 8.882856e-04	k: 590	n:720000
MEGF6   720000 perm   317 sec   (2268 perm/sec)   p_kst 8.194444e-04   p_cons 9.677778e-03   p_joint 1.441667e-03

Joint ci ratio: 1.208867e-01	ci left: 1.351389e-03	ci right 1.526578e-03	k: 1049	n:730000
Cons ci ratio: 4.643059e-02	ci left: 9.445287e-03	ci right 9.895604e-03	k: 7058	n:730000
KS ci ratio: 1.601010e-01	ci left: 7.548526e-04	ci right 8.875164e-04	k: 598	n:730000
MEGF6   730000 perm   324 sec   (2251 perm/sec)   p_kst 8.191781e-04   p_cons 9.668493e-03   p_joint 1.436986e-03

Joint ci ratio: 1.195276e-01	ci left: 1.364585e-03	ci right 1.539355e-03	k: 1073	n:740000
Cons ci ratio: 4.609206e-02	ci left: 9.456564e-03	ci right 9.904044e-03	k: 7162	n:740000
KS ci ratio: 1.582616e-01	ci left: 7.628174e-04	ci right 8.951945e-04	k: 612	n:740000
MEGF6   740000 perm   331 sec   (2234 perm/sec)   p_kst 8.270270e-04   p_cons 9.678378e-03   p_joint 1.450000e-03

Joint ci ratio: 1.185925e-01	ci left: 1.368382e-03	ci right 1.542172e-03	k: 1090	n:750000
Cons ci ratio: 4.576719e-02	ci left: 9.464915e-03	ci right 9.909551e-03	k: 7264	n:750000
KS ci ratio: 1.567345e-01	ci left: 7.680161e-04	ci right 8.998885e-04	k: 624	n:750000
MEGF6   750000 perm   338 sec   (2216 perm/sec)   p_kst 8.320000e-04   p_cons 9.685333e-03   p_joint 1.453333e-03

Joint ci ratio: 1.173612e-01	ci left: 1.379748e-03	ci right 1.553035e-03	k: 1113	n:760000
Cons ci ratio: 4.543042e-02	ci left: 9.480864e-03	ci right 9.922886e-03	k: 7372	n:760000
KS ci ratio: 1.552508e-01	ci left: 7.730840e-04	ci right 9.044529e-04	k: 636	n:760000
MEGF6   760000 perm   347 sec   (2189 perm/sec)   p_kst 8.368421e-04   p_cons 9.700000e-03   p_joint 1.464474e-03

Joint ci ratio: 1.161675e-01	ci left: 1.390827e-03	ci right 1.563607e-03	k: 1136	n:770000
Cons ci ratio: 4.510706e-02	ci left: 9.493841e-03	ci right 9.933236e-03	k: 7478	n:770000
KS ci ratio: 1.540462e-01	ci left: 7.755284e-04	ci right 9.061959e-04	k: 646	n:770000
MEGF6   770000 perm   354 sec   (2173 perm/sec)   p_kst 8.389610e-04   p_cons 9.711688e-03   p_joint 1.475325e-03

Joint ci ratio: 1.153085e-01	ci left: 1.394160e-03	ci right 1.565986e-03	k: 1153	n:780000
Cons ci ratio: 4.483231e-02	ci left: 9.488747e-03	ci right 9.925162e-03	k: 7570	n:780000
KS ci ratio: 1.533371e-01	ci left: 7.729822e-04	ci right 9.025660e-04	k: 652	n:780000
MEGF6   780000 perm   364 sec   (2140 perm/sec)   p_kst 8.358974e-04   p_cons 9.705128e-03   p_joint 1.478205e-03

Joint ci ratio: 1.147631e-01	ci left: 1.390036e-03	ci right 1.560489e-03	k: 1164	n:790000
Cons ci ratio: 4.450392e-02	ci left: 9.508827e-03	ci right 9.942880e-03	k: 7682	n:790000
KS ci ratio: 1.522912e-01	ci left: 7.741544e-04	ci right 9.029688e-04	k: 661	n:790000
MEGF6   790000 perm   372 sec   (2125 perm/sec)   p_kst 8.367089e-04   p_cons 9.724051e-03   p_joint 1.473418e-03

Joint ci ratio: 1.143716e-01	ci left: 1.382374e-03	ci right 1.551269e-03	k: 1172	n:800000
Cons ci ratio: 4.422849e-02	ci left: 9.508636e-03	ci right 9.939925e-03	k: 7778	n:800000
KS ci ratio: 1.517196e-01	ci left: 7.704896e-04	ci right 8.981694e-04	k: 666	n:800000
MEGF6   800000 perm   379 sec   (2109 perm/sec)   p_kst 8.325000e-04   p_cons 9.722500e-03   p_joint 1.465000e-03

Joint ci ratio: 1.136472e-01	ci left: 1.383298e-03	ci right 1.551164e-03	k: 1187	n:810000
Cons ci ratio: 4.394121e-02	ci left: 9.515784e-03	ci right 9.944523e-03	k: 7880	n:810000
KS ci ratio: 1.503726e-01	ci left: 7.752325e-04	ci right 9.024550e-04	k: 678	n:810000
MEGF6   810000 perm   387 sec   (2095 perm/sec)   p_kst 8.370370e-04   p_cons 9.728395e-03   p_joint 1.465432e-03

Joint ci ratio: 1.130306e-01	ci left: 1.381832e-03	ci right 1.548551e-03	k: 1200	n:820000
Cons ci ratio: 4.368157e-02	ci left: 9.513116e-03	ci right 9.939139e-03	k: 7974	n:820000
KS ci ratio: 1.494946e-01	ci left: 7.751685e-04	ci right 9.015713e-04	k: 686	n:820000
MEGF6   820000 perm   394 sec   (2080 perm/sec)   p_kst 8.365854e-04   p_cons 9.724390e-03   p_joint 1.463415e-03

Joint ci ratio: 1.174741e-01	ci left: 1.261040e-03	ci right 1.419581e-03	k: 1111	n:830000
Cons ci ratio: 4.341018e-02	ci left: 9.517670e-03	ci right 9.941183e-03	k: 8074	n:830000
KS ci ratio: 1.479937e-01	ci left: 7.820690e-04	ci right 9.082035e-04	k: 700	n:830000
MEGF6   830000 perm   402 sec   (2066 perm/sec)   p_kst 8.433735e-04   p_cons 9.727711e-03   p_joint 1.338554e-03

Joint ci ratio: 1.166896e-01	ci left: 1.263362e-03	ci right 1.421061e-03	k: 1126	n:840000
Cons ci ratio: 4.312781e-02	ci left: 9.529191e-03	ci right 9.950390e-03	k: 8180	n:840000
KS ci ratio: 1.467427e-01	ci left: 7.865178e-04	ci right 9.122035e-04	k: 712	n:840000
MEGF6   840000 perm   409 sec   (2052 perm/sec)   p_kst 8.476190e-04   p_cons 9.738095e-03   p_joint 1.340476e-03

Joint ci ratio: 1.105274e-01	ci left: 1.395959e-03	ci right 1.560409e-03	k: 1255	n:850000
Cons ci ratio: 4.287439e-02	ci left: 9.529974e-03	ci right 9.948671e-03	k: 8277	n:850000
KS ci ratio: 1.460278e-01	ci left: 7.851983e-04	ci right 9.100085e-04	k: 719	n:850000
MEGF6   850000 perm   417 sec   (2038 perm/sec)   p_kst 8.458824e-04   p_cons 9.737647e-03   p_joint 1.476471e-03

Joint ci ratio: 1.097436e-01	ci left: 1.400081e-03	ci right 1.563771e-03	k: 1273	n:860000
Cons ci ratio: 4.258690e-02	ci left: 9.548003e-03	ci right 9.964611e-03	k: 8389	n:860000
KS ci ratio: 1.449247e-01	ci left: 7.883933e-04	ci right 9.126828e-04	k: 730	n:860000
MEGF6   860000 perm   425 sec   (2024 perm/sec)   p_kst 8.488372e-04   p_cons 9.754651e-03   p_joint 1.480233e-03

Joint ci ratio: 1.088498e-01	ci left: 1.407467e-03	ci right 1.570594e-03	k: 1294	n:870000
Cons ci ratio: 4.231013e-02	ci left: 9.563352e-03	ci right 9.977852e-03	k: 8499	n:870000
KS ci ratio: 1.435561e-01	ci left: 7.948427e-04	ci right 9.188642e-04	k: 744	n:870000
MEGF6   870000 perm   433 sec   (2011 perm/sec)   p_kst 8.551724e-04   p_cons 9.768966e-03   p_joint 1.487356e-03

Joint ci ratio: 1.082662e-01	ci left: 1.406950e-03	ci right 1.569087e-03	k: 1308	n:880000
Cons ci ratio: 4.202883e-02	ci left: 9.582860e-03	ci right 9.995377e-03	k: 8613	n:880000
KS ci ratio: 1.427915e-01	ci left: 7.945756e-04	ci right 9.178390e-04	k: 752	n:880000
MEGF6   880000 perm   441 sec   (1997 perm/sec)   p_kst 8.545455e-04   p_cons 9.787500e-03   p_joint 1.486364e-03

Joint ci ratio: 1.076919e-01	ci left: 1.406447e-03	ci right 1.567612e-03	k: 1322	n:890000
Cons ci ratio: 4.178693e-02	ci left: 9.586370e-03	ci right 9.996606e-03	k: 8713	n:890000
KS ci ratio: 1.420390e-01	ci left: 7.943163e-04	ci right 9.168350e-04	k: 760	n:890000
MEGF6   890000 perm   449 sec   (1983 perm/sec)   p_kst 8.539326e-04   p_cons 9.789888e-03   p_joint 1.485393e-03

Joint ci ratio: 1.072472e-01	ci left: 1.402713e-03	ci right 1.562745e-03	k: 1333	n:900000
Cons ci ratio: 4.155868e-02	ci left: 9.585409e-03	ci right 9.993310e-03	k: 8809	n:900000
KS ci ratio: 1.413904e-01	ci left: 7.929925e-04	ci right 9.147014e-04	k: 767	n:900000
MEGF6   900000 perm   457 sec   (1970 perm/sec)   p_kst 8.522222e-04   p_cons 9.787778e-03   p_joint 1.481111e-03

Joint ci ratio: 1.066492e-01	ci left: 1.403341e-03	ci right 1.562496e-03	k: 1348	n:910000
Cons ci ratio: 4.136228e-02	ci left: 9.571425e-03	ci right 9.976760e-03	k: 8893	n:910000
KS ci ratio: 1.406597e-01	ci left: 7.927594e-04	ci right 9.137509e-04	k: 775	n:910000
MEGF6   910000 perm   465 sec   (1957 perm/sec)   p_kst 8.516484e-04   p_cons 9.772527e-03   p_joint 1.481319e-03

Joint ci ratio: 1.061001e-01	ci left: 1.402900e-03	ci right 1.561135e-03	k: 1362	n:920000
Cons ci ratio: 4.115707e-02	ci left: 9.563128e-03	ci right 9.966055e-03	k: 8982	n:920000
KS ci ratio: 1.398510e-01	ci left: 7.935818e-04	ci right 9.139445e-04	k: 784	n:920000
MEGF6   920000 perm   473 sec   (1944 perm/sec)   p_kst 8.521739e-04   p_cons 9.763043e-03   p_joint 1.480435e-03

Joint ci ratio: 1.056363e-01	ci left: 1.400377e-03	ci right 1.557593e-03	k: 1374	n:930000
Cons ci ratio: 4.095032e-02	ci left: 9.557143e-03	ci right 9.957747e-03	k: 9073	n:930000
KS ci ratio: 1.392317e-01	ci left: 7.923127e-04	ci right 9.119067e-04	k: 791	n:930000
MEGF6   930000 perm   482 sec   (1931 perm/sec)   p_kst 8.505376e-04   p_cons 9.755914e-03   p_joint 1.477419e-03

Joint ci ratio: 1.052926e-01	ci left: 1.394801e-03	ci right 1.550850e-03	k: 1383	n:940000
Cons ci ratio: 4.075115e-02	ci left: 9.549184e-03	ci right 9.947463e-03	k: 9162	n:940000
KS ci ratio: 1.387946e-01	ci left: 7.890179e-04	ci right 9.077097e-04	k: 796	n:940000
MEGF6   940000 perm   490 sec   (1919 perm/sec)   p_kst 8.468085e-04   p_cons 9.746809e-03   p_joint 1.471277e-03

Joint ci ratio: 1.048016e-01	ci left: 1.393443e-03	ci right 1.548569e-03	k: 1396	n:950000
Cons ci ratio: 4.052391e-02	ci left: 9.555986e-03	ci right 9.952274e-03	k: 9265	n:950000
KS ci ratio: 1.380175e-01	ci left: 7.898581e-04	ci right 9.079563e-04	k: 805	n:950000
MEGF6   950000 perm   498 sec   (1906 perm/sec)   p_kst 8.473684e-04   p_cons 9.752632e-03   p_joint 1.469474e-03

Joint ci ratio: 1.041327e-01	ci left: 1.397188e-03	ci right 1.551678e-03	k: 1414	n:960000
Cons ci ratio: 4.031998e-02	ci left: 9.553372e-03	ci right 9.947511e-03	k: 9359	n:960000
KS ci ratio: 1.370850e-01	ci left: 7.926945e-04	ci right 9.103508e-04	k: 816	n:960000
MEGF6   960000 perm   507 sec   (1894 perm/sec)   p_kst 8.500000e-04   p_cons 9.748958e-03   p_joint 1.472917e-03

Joint ci ratio: 1.034765e-01	ci left: 1.400860e-03	ci right 1.554719e-03	k: 1432	n:970000
Cons ci ratio: 4.011697e-02	ci left: 9.551836e-03	ci right 9.943883e-03	k: 9454	n:970000
KS ci ratio: 1.359250e-01	ci left: 7.984627e-04	ci right 9.158911e-04	k: 830	n:970000
MEGF6   970000 perm   516 sec   (1881 perm/sec)   p_kst 8.556701e-04   p_cons 9.746392e-03   p_joint 1.476289e-03

Joint ci ratio: 1.031176e-01	ci left: 1.396505e-03	ci right 1.549323e-03	k: 1442	n:980000
Cons ci ratio: 3.991487e-02	ci left: 9.551348e-03	ci right 9.941354e-03	k: 9550	n:980000
KS ci ratio: 1.353562e-01	ci left: 7.972155e-04	ci right 9.139304e-04	k: 837	n:980000
MEGF6   980000 perm   524 sec   (1869 perm/sec)   p_kst 8.540816e-04   p_cons 9.744898e-03   p_joint 1.471429e-03

Joint ci ratio: 1.026210e-01	ci left: 1.396177e-03	ci right 1.548178e-03	k: 1456	n:990000
Cons ci ratio: 3.969088e-02	ci left: 9.562876e-03	ci right 9.951112e-03	k: 9658	n:990000
KS ci ratio: 1.347945e-01	ci left: 7.959946e-04	ci right 9.120083e-04	k: 844	n:990000
MEGF6   990000 perm   533 sec   (1857 perm/sec)   p_kst 8.525253e-04   p_cons 9.755556e-03   p_joint 1.470707e-03

Joint ci ratio: 1.022360e-01	ci left: 1.392933e-03	ci right 1.543978e-03	k: 1467	n:1000000
Cons ci ratio: 3.950536e-02	ci left: 9.557346e-03	ci right 9.943502e-03	k: 9749	n:1000000
KS ci ratio: 1.340823e-01	ci left: 7.967320e-04	ci right 9.121907e-04	k: 853	n:1000000
MEGF6   1000000 perm   542 sec   (1846 perm/sec)   p_kst 8.530000e-04   p_cons 9.749000e-03   p_joint 1.467000e-03

Joint ci ratio: 1.774071e-01	ci left: 4.403082e-04	ci right 5.269548e-04	k: 487	n:1010000
Cons ci ratio: 5.131519e-02	ci left: 5.597112e-03	ci right 5.892862e-03	k: 5801	n:1010000
KS ci ratio: 1.333040e-01	ci left: 7.984134e-04	ci right 9.133911e-04	k: 863	n:1010000
MEGF6   1010000 perm   550 sec   (1835 perm/sec)   p_kst 8.544554e-04   p_cons 5.743564e-03   p_joint 4.821782e-04

Joint ci ratio: 1.766845e-01	ci left: 4.397392e-04	ci right 5.258838e-04	k: 491	n:1020000
Cons ci ratio: 5.105184e-02	ci left: 5.600309e-03	ci right 5.894665e-03	k: 5861	n:1020000
KS ci ratio: 1.328437e-01	ci left: 7.962723e-04	ci right 9.105144e-04	k: 869	n:1020000
MEGF6   1020000 perm   559 sec   (1824 perm/sec)   p_kst 8.519608e-04   p_cons 5.746078e-03   p_joint 4.813725e-04

Joint ci ratio: 1.757935e-01	ci left: 4.401101e-04	ci right 5.258464e-04	k: 496	n:1030000
Cons ci ratio: 5.080976e-02	ci left: 5.599614e-03	ci right 5.892497e-03	k: 5917	n:1030000
KS ci ratio: 1.321618e-01	ci left: 7.969897e-04	ci right 9.107018e-04	k: 878	n:1030000
MEGF6   1030000 perm   568 sec   (1813 perm/sec)   p_kst 8.524272e-04   p_cons 5.744660e-03   p_joint 4.815534e-04

Joint ci ratio: 1.752655e-01	ci left: 4.386362e-04	ci right 5.238014e-04	k: 499	n:1040000
Cons ci ratio: 5.056683e-02	ci left: 5.599884e-03	ci right 5.891340e-03	k: 5974	n:1040000
KS ci ratio: 1.313424e-01	ci left: 7.995548e-04	ci right 9.128703e-04	k: 889	n:1040000
MEGF6   1040000 perm   577 sec   (1802 perm/sec)   p_kst 8.548077e-04   p_cons 5.744231e-03   p_joint 4.798077e-04

Joint ci ratio: 1.745687e-01	ci left: 4.381014e-04	ci right 5.227890e-04	k: 503	n:1050000
Cons ci ratio: 5.032736e-02	ci left: 5.600153e-03	ci right 5.890203e-03	k: 6031	n:1050000
KS ci ratio: 1.307561e-01	ci left: 7.993092e-04	ci right 9.120450e-04	k: 897	n:1050000
MEGF6   1050000 perm   586 sec   (1791 perm/sec)   p_kst 8.542857e-04   p_cons 5.743810e-03   p_joint 4.790476e-04

Joint ci ratio: 1.743961e-01	ci left: 4.348705e-04	ci right 5.188417e-04	k: 504	n:1060000
Cons ci ratio: 5.012024e-02	ci left: 5.593899e-03	ci right 5.882397e-03	k: 6081	n:1060000
KS ci ratio: 1.300340e-01	ci left: 8.008948e-04	ci right 9.131822e-04	k: 907	n:1060000
MEGF6   1060000 perm   595 sec   (1780 perm/sec)   p_kst 8.556604e-04   p_cons 5.736792e-03   p_joint 4.754717e-04

Joint ci ratio: 1.731996e-01	ci left: 4.370638e-04	ci right 5.208190e-04	k: 511	n:1070000
Cons ci ratio: 4.986660e-02	ci left: 5.598839e-03	ci right 5.886089e-03	k: 6143	n:1070000
KS ci ratio: 1.295357e-01	ci left: 7.997394e-04	ci right 9.114022e-04	k: 914	n:1070000
MEGF6   1070000 perm   605 sec   (1769 perm/sec)   p_kst 8.542056e-04   p_cons 5.741121e-03   p_joint 4.775701e-04

Joint ci ratio: 1.723601e-01	ci left: 4.374464e-04	ci right 5.208262e-04	k: 516	n:1080000
Cons ci ratio: 4.959669e-02	ci left: 5.608264e-03	ci right 5.894396e-03	k: 6210	n:1080000
KS ci ratio: 1.291132e-01	ci left: 7.977102e-04	ci right 9.086986e-04	k: 920	n:1080000
MEGF6   1080000 perm   614 sec   (1759 perm/sec)   p_kst 8.518519e-04   p_cons 5.750000e-03   p_joint 4.777778e-04

Joint ci ratio: 1.705547e-01	ci left: 4.430919e-04	ci right 5.265722e-04	k: 527	n:1090000
Cons ci ratio: 4.935088e-02	ci left: 5.612990e-03	ci right 5.897903e-03	k: 6272	n:1090000
KS ci ratio: 1.284870e-01	ci left: 7.983826e-04	ci right 9.088846e-04	k: 929	n:1090000
MEGF6   1090000 perm   623 sec   (1748 perm/sec)   p_kst 8.522936e-04   p_cons 5.754128e-03   p_joint 4.834862e-04

Joint ci ratio: 1.699124e-01	ci left: 4.425452e-04	ci right 5.255764e-04	k: 531	n:1100000
Cons ci ratio: 4.914382e-02	ci left: 5.609551e-03	ci right 5.893061e-03	k: 6325	n:1100000
KS ci ratio: 1.280062e-01	ci left: 7.972841e-04	ci right 9.071898e-04	k: 936	n:1100000
MEGF6   1100000 perm   633 sec   (1738 perm/sec)   p_kst 8.509091e-04   p_cons 5.750000e-03   p_joint 4.827273e-04

Joint ci ratio: 1.692772e-01	ci left: 4.420090e-04	ci right 5.245979e-04	k: 535	n:1110000
Cons ci ratio: 4.894319e-02	ci left: 5.605286e-03	ci right 5.887392e-03	k: 6377	n:1110000
KS ci ratio: 1.275308e-01	ci left: 7.962060e-04	ci right 9.055247e-04	k: 943	n:1110000
MEGF6   1110000 perm   642 sec   (1728 perm/sec)   p_kst 8.495495e-04   p_cons 5.745045e-03   p_joint 4.819820e-04

Joint ci ratio: 1.684932e-01	ci left: 4.423381e-04	ci right 5.245668e-04	k: 540	n:1120000
Cons ci ratio: 4.873738e-02	ci left: 5.602865e-03	ci right 5.883629e-03	k: 6431	n:1120000
KS ci ratio: 1.270607e-01	ci left: 7.951480e-04	ci right 9.038886e-04	k: 950	n:1120000
MEGF6   1120000 perm   652 sec   (1718 perm/sec)   p_kst 8.482143e-04   p_cons 5.741964e-03   p_joint 4.821429e-04

Joint ci ratio: 1.680281e-01	ci left: 4.409666e-04	ci right 5.226912e-04	k: 543	n:1130000
Cons ci ratio: 4.852663e-02	ci left: 5.602237e-03	ci right 5.881722e-03	k: 6487	n:1130000
KS ci ratio: 1.262663e-01	ci left: 7.983944e-04	ci right 9.068453e-04	k: 962	n:1130000
MEGF6   1130000 perm   662 sec   (1708 perm/sec)   p_kst 8.513274e-04   p_cons 5.740708e-03   p_joint 4.805310e-04

Joint ci ratio: 1.672612e-01	ci left: 4.413004e-04	ci right 5.226760e-04	k: 548	n:1140000
Cons ci ratio: 4.833344e-02	ci left: 5.598156e-03	ci right 5.876294e-03	k: 6539	n:1140000
KS ci ratio: 1.256804e-01	ci left: 7.990369e-04	ci right 9.070339e-04	k: 971	n:1140000
MEGF6   1140000 perm   672 sec   (1697 perm/sec)   p_kst 8.517544e-04   p_cons 5.735965e-03   p_joint 4.807018e-04

Joint ci ratio: 1.663545e-01	ci left: 4.424626e-04	ci right 5.235659e-04	k: 554	n:1150000
Cons ci ratio: 4.816091e-02	ci left: 5.589852e-03	ci right 5.866559e-03	k: 6586	n:1150000
KS ci ratio: 1.252944e-01	ci left: 7.971423e-04	ci right 9.045278e-04	k: 977	n:1150000
MEGF6   1150000 perm   682 sec   (1687 perm/sec)   p_kst 8.495652e-04   p_cons 5.726957e-03   p_joint 4.817391e-04

Joint ci ratio: 1.657583e-01	ci left: 4.419533e-04	ci right 5.226439e-04	k: 558	n:1160000
Cons ci ratio: 4.790315e-02	ci left: 5.602136e-03	ci right 5.877927e-03	k: 6657	n:1160000
KS ci ratio: 1.249120e-01	ci left: 7.952809e-04	ci right 9.020644e-04	k: 983	n:1160000
MEGF6   1160000 perm   692 sec   (1677 perm/sec)   p_kst 8.474138e-04   p_cons 5.738793e-03   p_joint 4.810345e-04

Joint ci ratio: 1.651685e-01	ci left: 4.414531e-04	ci right 5.217371e-04	k: 562	n:1170000
Cons ci ratio: 4.774233e-02	ci left: 5.592256e-03	ci right 5.866610e-03	k: 6702	n:1170000
KS ci ratio: 1.240947e-01	ci left: 7.992488e-04	ci right 9.058113e-04	k: 996	n:1170000
MEGF6   1170000 perm   703 sec   (1664 perm/sec)   p_kst 8.512821e-04   p_cons 5.728205e-03   p_joint 4.803419e-04

Joint ci ratio: 1.641510e-01	ci left: 4.433998e-04	ci right 5.234920e-04	k: 569	n:1180000
Cons ci ratio: 4.751237e-02	ci left: 5.599293e-03	ci right 5.872633e-03	k: 6767	n:1180000
KS ci ratio: 1.234156e-01	ci left: 8.015090e-04	ci right 9.077453e-04	k: 1007	n:1180000
MEGF6   1180000 perm   713 sec   (1655 perm/sec)   p_kst 8.533898e-04   p_cons 5.734746e-03   p_joint 4.822034e-04

Joint ci ratio: 1.632937e-01	ci left: 4.445092e-04	ci right 5.243413e-04	k: 575	n:1190000
Cons ci ratio: 4.729613e-02	ci left: 5.603724e-03	ci right 5.876001e-03	k: 6829	n:1190000
KS ci ratio: 1.226873e-01	ci left: 8.045473e-04	ci right 9.105114e-04	k: 1019	n:1190000
MEGF6   1190000 perm   723 sec   (1645 perm/sec)   p_kst 8.563025e-04   p_cons 5.738655e-03   p_joint 4.831933e-04

Joint ci ratio: 1.625896e-01	ci left: 4.448017e-04	ci right 5.243082e-04	k: 580	n:1200000
Cons ci ratio: 4.710001e-02	ci left: 5.603965e-03	ci right 5.875095e-03	k: 6886	n:1200000
KS ci ratio: 1.224477e-01	ci left: 8.010738e-04	ci right 9.063594e-04	k: 1023	n:1200000
MEGF6   1200000 perm   739 sec   (1624 perm/sec)   p_kst 8.525000e-04   p_cons 5.738333e-03   p_joint 4.833333e-04

Joint ci ratio: 1.616187e-01	ci left: 4.466761e-04	ci right 5.259947e-04	k: 587	n:1210000
Cons ci ratio: 4.691650e-02	ci left: 5.601755e-03	ci right 5.871693e-03	k: 6940	n:1210000
KS ci ratio: 1.215017e-01	ci left: 8.072732e-04	ci right 9.124950e-04	k: 1039	n:1210000
MEGF6   1210000 perm   749 sec   (1615 perm/sec)   p_kst 8.586777e-04   p_cons 5.735537e-03   p_joint 4.851240e-04

Joint ci ratio: 1.610718e-01	ci left: 4.461612e-04	ci right 5.250942e-04	k: 591	n:1220000
Cons ci ratio: 4.669486e-02	ci left: 5.609305e-03	ci right 5.878296e-03	k: 7006	n:1220000
KS ci ratio: 1.205203e-01	ci left: 8.141690e-04	ci right 9.193714e-04	k: 1056	n:1220000
MEGF6   1220000 perm   760 sec   (1606 perm/sec)   p_kst 8.655738e-04   p_cons 5.742623e-03   p_joint 4.844262e-04

Joint ci ratio: 1.605305e-01	ci left: 4.456550e-04	ci right 5.242079e-04	k: 595	n:1230000
Cons ci ratio: 4.650278e-02	ci left: 5.610306e-03	ci right 5.878208e-03	k: 7064	n:1230000
KS ci ratio: 1.199541e-01	ci left: 8.154354e-04	ci right 9.202712e-04	k: 1066	n:1230000
MEGF6   1230000 perm   770 sec   (1598 perm/sec)   p_kst 8.666667e-04   p_cons 5.743089e-03   p_joint 4.837398e-04

Joint ci ratio: 1.601281e-01	ci left: 4.443833e-04	ci right 5.224968e-04	k: 598	n:1240000
Cons ci ratio: 4.631633e-02	ci left: 5.610496e-03	ci right 5.877305e-03	k: 7121	n:1240000
KS ci ratio: 1.193404e-01	ci left: 8.174648e-04	ci right 9.219860e-04	k: 1077	n:1240000
MEGF6   1240000 perm   780 sec   (1589 perm/sec)   p_kst 8.685484e-04   p_cons 5.742742e-03   p_joint 4.822581e-04

Joint ci ratio: 1.594639e-01	ci left: 4.446683e-04	ci right 5.224767e-04	k: 603	n:1250000
Cons ci ratio: 4.609014e-02	ci left: 5.620966e-03	ci right 5.886932e-03	k: 7191	n:1250000
KS ci ratio: 1.189001e-01	ci left: 8.171344e-04	ci right 9.212007e-04	k: 1085	n:1250000
MEGF6   1250000 perm   791 sec   (1580 perm/sec)   p_kst 8.680000e-04   p_cons 5.752800e-03   p_joint 4.824000e-04

Joint ci ratio: 1.590695e-01	ci left: 4.434252e-04	ci right 5.208058e-04	k: 606	n:1260000
Cons ci ratio: 4.593090e-02	ci left: 5.615580e-03	ci right 5.880350e-03	k: 7241	n:1260000
KS ci ratio: 1.183024e-01	ci left: 8.191204e-04	ci right 9.228786e-04	k: 1096	n:1260000
MEGF6   1260000 perm   802 sec   (1572 perm/sec)   p_kst 8.698413e-04   p_cons 5.746825e-03   p_joint 4.809524e-04

Joint ci ratio: 1.582890e-01	ci left: 4.444705e-04	ci right 5.216168e-04	k: 612	n:1270000
Cons ci ratio: 4.571343e-02	ci left: 5.625072e-03	ci right 5.889001e-03	k: 7310	n:1270000
KS ci ratio: 1.179803e-01	ci left: 8.172554e-04	ci right 9.204758e-04	k: 1102	n:1270000
MEGF6   1270000 perm   812 sec   (1564 perm/sec)   p_kst 8.677165e-04   p_cons 5.755906e-03   p_joint 4.818898e-04

Joint ci ratio: 1.579032e-01	ci left: 4.432491e-04	ci right 5.199781e-04	k: 615	n:1280000
Cons ci ratio: 4.552385e-02	ci left: 5.628239e-03	ci right 5.891192e-03	k: 7371	n:1280000
KS ci ratio: 1.175548e-01	ci left: 8.169365e-04	ci right 9.197186e-04	k: 1110	n:1280000
MEGF6   1280000 perm   823 sec   (1556 perm/sec)   p_kst 8.671875e-04   p_cons 5.758594e-03   p_joint 4.804687e-04

Joint ci ratio: 1.567620e-01	ci left: 4.465151e-04	ci right 5.231984e-04	k: 624	n:1290000
Cons ci ratio: 4.534274e-02	ci left: 5.629826e-03	ci right 5.891780e-03	k: 7430	n:1290000
KS ci ratio: 1.172913e-01	ci left: 8.143657e-04	ci right 9.165789e-04	k: 1115	n:1290000
MEGF6   1290000 perm   834 sec   (1548 perm/sec)   p_kst 8.643411e-04   p_cons 5.759690e-03   p_joint 4.837209e-04

Joint ci ratio: 1.558913e-01	ci left: 4.482544e-04	ci right 5.247688e-04	k: 631	n:1300000
Cons ci ratio: 4.512441e-02	ci left: 5.641279e-03	ci right 5.902469e-03	k: 7502	n:1300000
KS ci ratio: 1.168732e-01	ci left: 8.140750e-04	ci right 9.158623e-04	k: 1123	n:1300000
MEGF6   1300000 perm   845 sec   (1538 perm/sec)   p_kst 8.638462e-04   p_cons 5.770769e-03   p_joint 4.853846e-04

Joint ci ratio: 1.552782e-01	ci left: 4.485008e-04	ci right 5.247282e-04	k: 636	n:1310000
Cons ci ratio: 4.495997e-02	ci left: 5.639728e-03	ci right 5.899869e-03	k: 7557	n:1310000
KS ci ratio: 1.163054e-01	ci left: 8.160128e-04	ci right 9.175126e-04	k: 1134	n:1310000
MEGF6   1310000 perm   857 sec   (1528 perm/sec)   p_kst 8.656489e-04   p_cons 5.768702e-03   p_joint 4.854962e-04

Joint ci ratio: 1.546724e-01	ci left: 4.487441e-04	ci right 5.246877e-04	k: 641	n:1320000
Cons ci ratio: 4.481508e-02	ci left: 5.633707e-03	ci right 5.892712e-03	k: 7606	n:1320000
KS ci ratio: 1.157457e-01	ci left: 8.179224e-04	ci right 9.191368e-04	k: 1145	n:1320000
MEGF6   1320000 perm   868 sec   (1520 perm/sec)   p_kst 8.674242e-04   p_cons 5.762121e-03   p_joint 4.856061e-04

Joint ci ratio: 1.538359e-01	ci left: 4.504301e-04	ci right 5.262088e-04	k: 648	n:1330000
Cons ci ratio: 4.465399e-02	ci left: 5.632239e-03	ci right 5.890222e-03	k: 7661	n:1330000
KS ci ratio: 1.154942e-01	ci left: 8.154232e-04	ci right 9.160941e-04	k: 1150	n:1330000
MEGF6   1330000 perm   880 sec   (1511 perm/sec)   p_kst 8.646617e-04   p_cons 5.760150e-03   p_joint 4.872180e-04

Joint ci ratio: 1.532467e-01	ci left: 4.506567e-04	ci right 5.261564e-04	k: 653	n:1340000
Cons ci ratio: 4.450042e-02	ci left: 5.629318e-03	ci right 5.886258e-03	k: 7714	n:1340000
KS ci ratio: 1.146994e-01	ci left: 8.209346e-04	ci right 9.215413e-04	k: 1166	n:1340000
MEGF6   1340000 perm   891 sec   (1504 perm/sec)   p_kst 8.701493e-04   p_cons 5.756716e-03   p_joint 4.873134e-04

Joint ci ratio: 1.527802e-01	ci left: 4.501680e-04	ci right 5.253353e-04	k: 657	n:1350000
Cons ci ratio: 4.433121e-02	ci left: 5.630838e-03	ci right 5.886845e-03	k: 7773	n:1350000
KS ci ratio: 1.141626e-01	ci left: 8.227686e-04	ci right 9.230963e-04	k: 1177	n:1350000
MEGF6   1350000 perm   902 sec   (1496 perm/sec)   p_kst 8.718519e-04   p_cons 5.757778e-03   p_joint 4.866667e-04

Joint ci ratio: 1.522030e-01	ci left: 4.503941e-04	ci right 5.252892e-04	k: 662	n:1360000
Cons ci ratio: 4.417810e-02	ci left: 5.628701e-03	ci right 5.883705e-03	k: 7827	n:1360000
KS ci ratio: 1.138249e-01	ci left: 8.217191e-04	ci right 9.216026e-04	k: 1184	n:1360000
MEGF6   1360000 perm   914 sec   (1488 perm/sec)   p_kst 8.705882e-04   p_cons 5.755147e-03   p_joint 4.867647e-04

Joint ci ratio: 1.519741e-01	ci left: 4.485109e-04	ci right 5.229704e-04	k: 664	n:1370000
Cons ci ratio: 4.401252e-02	ci left: 5.630207e-03	ci right 5.884298e-03	k: 7886	n:1370000
KS ci ratio: 1.133951e-01	ci left: 8.221039e-04	ci right 9.216315e-04	k: 1193	n:1370000
MEGF6   1370000 perm   925 sec   (1481 perm/sec)   p_kst 8.708029e-04   p_cons 5.756204e-03   p_joint 4.846715e-04

Joint ci ratio: 1.515192e-01	ci left: 4.480493e-04	ci right 5.221893e-04	k: 668	n:1380000
Cons ci ratio: 4.386546e-02	ci left: 5.627392e-03	ci right 5.880486e-03	k: 7939	n:1380000
KS ci ratio: 1.129232e-01	ci left: 8.231879e-04	ci right 9.224044e-04	k: 1203	n:1380000
MEGF6   1380000 perm   937 sec   (1473 perm/sec)   p_kst 8.717391e-04   p_cons 5.752899e-03   p_joint 4.840580e-04

Joint ci ratio: 1.508442e-01	ci left: 4.489792e-04	ci right 5.229122e-04	k: 674	n:1390000
Cons ci ratio: 4.368689e-02	ci left: 5.633158e-03	ci right 5.885455e-03	k: 8004	n:1390000
KS ci ratio: 1.123183e-01	ci left: 8.263548e-04	ci right 9.253842e-04	k: 1216	n:1390000
MEGF6   1390000 perm   948 sec   (1466 perm/sec)   p_kst 8.748201e-04   p_cons 5.758273e-03   p_joint 4.848921e-04

Joint ci ratio: 1.500679e-01	ci left: 4.505840e-04	ci right 5.243652e-04	k: 681	n:1400000
Cons ci ratio: 4.351861e-02	ci left: 5.636724e-03	ci right 5.888184e-03	k: 8066	n:1400000
KS ci ratio: 1.119052e-01	ci left: 8.267006e-04	ci right 9.253830e-04	k: 1225	n:1400000
MEGF6   1400000 perm   960 sec   (1459 perm/sec)   p_kst 8.750000e-04   p_cons 5.761429e-03   p_joint 4.864286e-04

Joint ci ratio: 1.495208e-01	ci left: 4.508015e-04	ci right 5.243252e-04	k: 686	n:1410000
Cons ci ratio: 4.337105e-02	ci left: 5.635331e-03	ci right 5.885855e-03	k: 8121	n:1410000
KS ci ratio: 1.117233e-01	ci left: 8.235949e-04	ci right 9.217363e-04	k: 1229	n:1410000
MEGF6   1410000 perm   974 sec   (1448 perm/sec)   p_kst 8.716312e-04   p_cons 5.759574e-03   p_joint 4.865248e-04

Joint ci ratio: 1.489797e-01	ci left: 4.510165e-04	ci right 5.242853e-04	k: 691	n:1420000
Cons ci ratio: 4.322499e-02	ci left: 5.633959e-03	ci right 5.883557e-03	k: 8176	n:1420000
KS ci ratio: 1.113168e-01	ci left: 8.239562e-04	ci right 9.217600e-04	k: 1238	n:1420000
MEGF6   1420000 perm   987 sec   (1439 perm/sec)   p_kst 8.718310e-04   p_cons 5.757746e-03   p_joint 4.866197e-04

Joint ci ratio: 1.485510e-01	ci left: 4.505556e-04	ci right 5.235202e-04	k: 695	n:1430000
Cons ci ratio: 4.308039e-02	ci left: 5.632607e-03	ci right 5.881290e-03	k: 8231	n:1430000
KS ci ratio: 1.106930e-01	ci left: 8.277128e-04	ci right 9.253759e-04	k: 1252	n:1430000
MEGF6   1430000 perm   999 sec   (1432 perm/sec)   p_kst 8.755245e-04   p_cons 5.755944e-03   p_joint 4.860140e-04

Joint ci ratio: 1.480203e-01	ci left: 4.507702e-04	ci right 5.234856e-04	k: 700	n:1440000
Cons ci ratio: 4.294505e-02	ci left: 5.629214e-03	ci right 5.876947e-03	k: 8283	n:1440000
KS ci ratio: 1.102975e-01	ci left: 8.280420e-04	ci right 9.253723e-04	k: 1261	n:1440000
MEGF6   1440000 perm   1011 sec   (1424 perm/sec)   p_kst 8.756944e-04   p_cons 5.752083e-03   p_joint 4.861111e-04

Joint ci ratio: 1.474952e-01	ci left: 4.509822e-04	ci right 5.234510e-04	k: 705	n:1450000
Cons ci ratio: 4.278259e-02	ci left: 5.633375e-03	ci right 5.880330e-03	k: 8346	n:1450000
KS ci ratio: 1.098199e-01	ci left: 8.297088e-04	ci right 9.267854e-04	k: 1272	n:1450000
MEGF6   1450000 perm   1023 sec   (1417 perm/sec)   p_kst 8.772414e-04   p_cons 5.755862e-03   p_joint 4.862069e-04

Joint ci ratio: 1.471829e-01	ci left: 4.498723e-04	ci right 5.219963e-04	k: 708	n:1460000
Cons ci ratio: 4.264748e-02	ci left: 5.630703e-03	ci right 5.876743e-03	k: 8399	n:1460000
KS ci ratio: 1.093484e-01	ci left: 8.313537e-04	ci right 9.281781e-04	k: 1283	n:1460000
MEGF6   1460000 perm   1035 sec   (1410 perm/sec)   p_kst 8.787671e-04   p_cons 5.752740e-03   p_joint 4.849315e-04

Joint ci ratio: 1.465640e-01	ci left: 4.507436e-04	ci right 5.226768e-04	k: 714	n:1470000
Cons ci ratio: 4.248331e-02	ci left: 5.636147e-03	ci right 5.881453e-03	k: 8464	n:1470000
KS ci ratio: 1.089250e-01	ci left: 8.323152e-04	ci right 9.288523e-04	k: 1293	n:1470000
MEGF6   1470000 perm   1049 sec   (1401 perm/sec)   p_kst 8.795918e-04   p_cons 5.757823e-03   p_joint 4.857143e-04

Joint ci ratio: 1.460542e-01	ci left: 4.509527e-04	ci right 5.226471e-04	k: 719	n:1480000
Cons ci ratio: 4.232353e-02	ci left: 5.640850e-03	ci right 5.885415e-03	k: 8528	n:1480000
KS ci ratio: 1.085482e-01	ci left: 8.326072e-04	ci right 9.288227e-04	k: 1302	n:1480000
MEGF6   1480000 perm   1061 sec   (1394 perm/sec)   p_kst 8.797297e-04   p_cons 5.762162e-03   p_joint 4.858108e-04

Joint ci ratio: 1.457509e-01	ci left: 4.498661e-04	ci right 5.212263e-04	k: 722	n:1490000
Cons ci ratio: 4.216060e-02	ci left: 5.646820e-03	ci right 5.890678e-03	k: 8594	n:1490000
KS ci ratio: 1.082992e-01	ci left: 8.309368e-04	ci right 9.267250e-04	k: 1308	n:1490000
MEGF6   1490000 perm   1073 sec   (1388 perm/sec)   p_kst 8.778523e-04   p_cons 5.767785e-03   p_joint 4.845638e-04

Joint ci ratio: 1.451499e-01	ci left: 4.507215e-04	ci right 5.218969e-04	k: 728	n:1500000
Cons ci ratio: 4.201661e-02	ci left: 5.648094e-03	ci right 5.891154e-03	k: 8653	n:1500000
KS ci ratio: 1.079698e-01	ci left: 8.305863e-04	ci right 9.260244e-04	k: 1316	n:1500000
MEGF6   1500000 perm   1085 sec   (1382 perm/sec)   p_kst 8.773333e-04   p_cons 5.768667e-03   p_joint 4.853333e-04

Joint ci ratio: 1.441642e-01	ci left: 4.541194e-04	ci right 5.253026e-04	k: 738	n:1510000
Cons ci ratio: 4.184754e-02	ci left: 5.656561e-03	ci right 5.898983e-03	k: 8723	n:1510000
KS ci ratio: 1.076841e-01	ci left: 8.295965e-04	ci right 9.246525e-04	k: 1323	n:1510000
MEGF6   1510000 perm   1098 sec   (1376 perm/sec)   p_kst 8.761589e-04   p_cons 5.776821e-03   p_joint 4.887417e-04

Joint ci ratio: 1.432941e-01	ci left: 4.568400e-04	ci right 5.279805e-04	k: 747	n:1520000
Cons ci ratio: 4.172106e-02	ci left: 5.653851e-03	ci right 5.895407e-03	k: 8776	n:1520000
KS ci ratio: 1.074006e-01	ci left: 8.286200e-04	ci right 9.232984e-04	k: 1330	n:1520000
MEGF6   1520000 perm   1110 sec   (1369 perm/sec)   p_kst 8.750000e-04   p_cons 5.773684e-03   p_joint 4.914474e-04

Joint ci ratio: 1.424395e-01	ci left: 4.595262e-04	ci right 5.306220e-04	k: 756	n:1530000
Cons ci ratio: 4.157442e-02	ci left: 5.656999e-03	ci right 5.897819e-03	k: 8838	n:1530000
KS ci ratio: 1.070793e-01	ci left: 8.282927e-04	ci right 9.226327e-04	k: 1338	n:1530000
MEGF6   1530000 perm   1123 sec   (1363 perm/sec)   p_kst 8.745098e-04   p_cons 5.776471e-03   p_joint 4.941176e-04

Joint ci ratio: 1.419714e-01	ci left: 4.596735e-04	ci right 5.305386e-04	k: 761	n:1540000
Cons ci ratio: 4.140126e-02	ci left: 5.667819e-03	ci right 5.908071e-03	k: 8912	n:1540000
KS ci ratio: 1.068006e-01	ci left: 8.273380e-04	ci right 9.213086e-04	k: 1345	n:1540000
MEGF6   1540000 perm   1135 sec   (1357 perm/sec)   p_kst 8.733766e-04   p_cons 5.787013e-03   p_joint 4.941558e-04

Joint ci ratio: 1.413237e-01	ci left: 4.610640e-04	ci right 5.317918e-04	k: 768	n:1550000
Cons ci ratio: 4.126721e-02	ci left: 5.668285e-03	ci right 5.907761e-03	k: 8970	n:1550000
KS ci ratio: 1.063275e-01	ci left: 8.295360e-04	ci right 9.233129e-04	k: 1357	n:1550000
MEGF6   1550000 perm   1148 sec   (1350 perm/sec)   p_kst 8.754839e-04   p_cons 5.787097e-03   p_joint 4.954839e-04

Joint ci ratio: 1.406848e-01	ci left: 4.624374e-04	ci right 5.330283e-04	k: 775	n:1560000
Cons ci ratio: 4.112986e-02	ci left: 5.670015e-03	ci right 5.908748e-03	k: 9030	n:1560000
KS ci ratio: 1.060935e-01	ci left: 8.279624e-04	ci right 9.213425e-04	k: 1363	n:1560000
MEGF6   1560000 perm   1162 sec   (1343 perm/sec)   p_kst 8.737179e-04   p_cons 5.788462e-03   p_joint 4.967949e-04

Joint ci ratio: 1.402337e-01	ci left: 4.625647e-04	ci right 5.329297e-04	k: 780	n:1570000
Cons ci ratio: 4.102112e-02	ci left: 5.664160e-03	ci right 5.902000e-03	k: 9078	n:1570000
KS ci ratio: 1.058224e-01	ci left: 8.270292e-04	ci right 9.200508e-04	k: 1370	n:1570000
MEGF6   1570000 perm   1174 sec   (1337 perm/sec)   p_kst 8.726115e-04   p_cons 5.782166e-03   p_joint 4.968153e-04

Joint ci ratio: 1.398760e-01	ci left: 4.620800e-04	ci right 5.321771e-04	k: 784	n:1580000
Cons ci ratio: 4.089297e-02	ci left: 5.664017e-03	ci right 5.901091e-03	k: 9135	n:1580000
KS ci ratio: 1.052860e-01	ci left: 8.304217e-04	ci right 9.233222e-04	k: 1384	n:1580000
MEGF6   1580000 perm   1187 sec   (1331 perm/sec)   p_kst 8.759494e-04   p_cons 5.781646e-03   p_joint 4.962025e-04

Joint ci ratio: 1.394326e-01	ci left: 4.622086e-04	ci right 5.320845e-04	k: 789	n:1590000
Cons ci ratio: 4.075709e-02	ci left: 5.666368e-03	ci right 5.902734e-03	k: 9196	n:1590000
KS ci ratio: 1.048703e-01	ci left: 8.319354e-04	ci right 9.246151e-04	k: 1395	n:1590000
MEGF6   1590000 perm   1202 sec   (1323 perm/sec)   p_kst 8.773585e-04   p_cons 5.783648e-03   p_joint 4.962264e-04

Joint ci ratio: 1.391687e-01	ci left: 4.611295e-04	ci right 5.306993e-04	k: 792	n:1600000
Cons ci ratio: 4.061814e-02	ci left: 5.669927e-03	ci right 5.905617e-03	k: 9259	n:1600000
KS ci ratio: 1.045339e-01	ci left: 8.322135e-04	ci right 9.246085e-04	k: 1404	n:1600000
MEGF6   1600000 perm   1216 sec   (1316 perm/sec)   p_kst 8.775000e-04   p_cons 5.786875e-03   p_joint 4.950000e-04

Joint ci ratio: 1.386452e-01	ci left: 4.618625e-04	ci right 5.312592e-04	k: 798	n:1610000
Cons ci ratio: 4.048716e-02	ci left: 5.671600e-03	ci right 5.906581e-03	k: 9319	n:1610000
KS ci ratio: 1.043485e-01	ci left: 8.300689e-04	ci right 9.220523e-04	k: 1409	n:1610000
MEGF6   1610000 perm   1229 sec   (1310 perm/sec)   p_kst 8.751553e-04   p_cons 5.788199e-03   p_joint 4.956522e-04

Joint ci ratio: 1.382995e-01	ci left: 4.613951e-04	ci right 5.305344e-04	k: 802	n:1620000
Cons ci ratio: 4.036393e-02	ci left: 5.671419e-03	ci right 5.905661e-03	k: 9376	n:1620000
KS ci ratio: 1.040905e-01	ci left: 8.291534e-04	ci right 9.207943e-04	k: 1416	n:1620000
MEGF6   1620000 perm   1241 sec   (1305 perm/sec)   p_kst 8.740741e-04   p_cons 5.787654e-03   p_joint 4.950617e-04

Joint ci ratio: 1.380419e-01	ci left: 4.603413e-04	ci right 5.291837e-04	k: 805	n:1630000
Cons ci ratio: 4.023324e-02	ci left: 5.673672e-03	ci right 5.907230e-03	k: 9437	n:1630000
KS ci ratio: 1.037615e-01	ci left: 8.294445e-04	ci right 9.208102e-04	k: 1425	n:1630000
MEGF6   1630000 perm   1255 sec   (1299 perm/sec)   p_kst 8.742331e-04   p_cons 5.789571e-03   p_joint 4.938650e-04

Joint ci ratio: 1.373618e-01	ci left: 4.622444e-04	ci right 5.310029e-04	k: 813	n:1640000
Cons ci ratio: 4.012293e-02	ci left: 5.670465e-03	ci right 5.903237e-03	k: 9489	n:1640000
KS ci ratio: 1.032916e-01	ci left: 8.321085e-04	ci right 9.233274e-04	k: 1438	n:1640000
MEGF6   1640000 perm   1268 sec   (1294 perm/sec)   p_kst 8.768293e-04   p_cons 5.785976e-03   p_joint 4.957317e-04

Joint ci ratio: 1.368583e-01	ci left: 4.629546e-04	ci right 5.315457e-04	k: 819	n:1650000
Cons ci ratio: 3.997772e-02	ci left: 5.677498e-03	ci right 5.909696e-03	k: 9558	n:1650000
KS ci ratio: 1.030413e-01	ci left: 8.311984e-04	ci right 9.220833e-04	k: 1445	n:1650000
MEGF6   1650000 perm   1281 sec   (1288 perm/sec)   p_kst 8.757576e-04   p_cons 5.792727e-03   p_joint 4.963636e-04

Joint ci ratio: 1.365257e-01	ci left: 4.624929e-04	ci right 5.308357e-04	k: 823	n:1660000
Cons ci ratio: 3.987993e-02	ci left: 5.671327e-03	ci right 5.902692e-03	k: 9605	n:1660000
KS ci ratio: 1.026515e-01	ci left: 8.326473e-04	ci right 9.233255e-04	k: 1456	n:1660000
MEGF6   1660000 perm   1294 sec   (1283 perm/sec)   p_kst 8.771084e-04   p_cons 5.786145e-03   p_joint 4.957831e-04

Joint ci ratio: 1.361956e-01	ci left: 4.620370e-04	ci right 5.301339e-04	k: 827	n:1670000
Cons ci ratio: 3.976008e-02	ci left: 5.671751e-03	ci right 5.902423e-03	k: 9663	n:1670000
KS ci ratio: 1.024409e-01	ci left: 8.311620e-04	ci right 9.214816e-04	k: 1462	n:1670000
MEGF6   1670000 perm   1307 sec   (1278 perm/sec)   p_kst 8.754491e-04   p_cons 5.786228e-03   p_joint 4.952096e-04

Joint ci ratio: 1.359496e-01	ci left: 4.610117e-04	ci right 5.288248e-04	k: 830	n:1680000
Cons ci ratio: 3.965977e-02	ci left: 5.666868e-03	ci right 5.896746e-03	k: 9712	n:1680000
KS ci ratio: 1.023013e-01	ci left: 8.285345e-04	ci right 9.184385e-04	k: 1466	n:1680000
MEGF6   1680000 perm   1320 sec   (1273 perm/sec)   p_kst 8.726190e-04   p_cons 5.780952e-03   p_joint 4.940476e-04

Joint ci ratio: 1.356236e-01	ci left: 4.605702e-04	ci right 5.281429e-04	k: 834	n:1690000
Cons ci ratio: 3.950124e-02	ci left: 5.679034e-03	ci right 5.908463e-03	k: 9790	n:1690000
KS ci ratio: 1.019544e-01	ci left: 8.293980e-04	ci right 9.190722e-04	k: 1476	n:1690000
MEGF6   1690000 perm   1334 sec   (1267 perm/sec)   p_kst 8.733728e-04   p_cons 5.792899e-03   p_joint 4.934911e-04

Joint ci ratio: 1.352194e-01	ci left: 4.607025e-04	ci right 5.280769e-04	k: 839	n:1700000
Cons ci ratio: 3.939079e-02	ci left: 5.677662e-03	ci right 5.906380e-03	k: 9845	n:1700000
KS ci ratio: 1.015426e-01	ci left: 8.313984e-04	ci right 9.209042e-04	k: 1488	n:1700000
MEGF6   1700000 perm   1347 sec   (1262 perm/sec)   p_kst 8.752941e-04   p_cons 5.791176e-03   p_joint 4.935294e-04

Joint ci ratio: 1.347390e-01	ci left: 4.613987e-04	ci right 5.286159e-04	k: 845	n:1710000
Cons ci ratio: 3.927927e-02	ci left: 5.676885e-03	ci right 5.904910e-03	k: 9901	n:1710000
KS ci ratio: 1.013048e-01	ci left: 8.305262e-04	ci right 9.197162e-04	k: 1495	n:1710000
MEGF6   1710000 perm   1360 sec   (1257 perm/sec)   p_kst 8.742690e-04   p_cons 5.790058e-03   p_joint 4.941520e-04

Joint ci ratio: 1.341063e-01	ci left: 4.632109e-04	ci right 5.303500e-04	k: 853	n:1720000
Cons ci ratio: 3.915090e-02	ci left: 5.681301e-03	ci right 5.908740e-03	k: 9966	n:1720000
KS ci ratio: 1.010014e-01	ci left: 8.307977e-04	ci right 9.197339e-04	k: 1504	n:1720000
MEGF6   1720000 perm   1374 sec   (1252 perm/sec)   p_kst 8.744186e-04   p_cons 5.794186e-03   p_joint 4.959302e-04

Joint ci ratio: 1.333278e-01	ci left: 4.661204e-04	ci right 5.332580e-04	k: 863	n:1730000
Cons ci ratio: 3.901987e-02	ci left: 5.686811e-03	ci right 5.913692e-03	k: 10033	n:1730000
KS ci ratio: 1.007341e-01	ci left: 8.305030e-04	ci right 9.191584e-04	k: 1512	n:1730000
MEGF6   1730000 perm   1388 sec   (1247 perm/sec)   p_kst 8.739884e-04   p_cons 5.799422e-03   p_joint 4.988439e-04

Joint ci ratio: 1.330970e-01	ci left: 4.651082e-04	ci right 5.319749e-04	k: 866	n:1740000
Cons ci ratio: 3.891534e-02	ci left: 5.684860e-03	ci right 5.911042e-03	k: 10087	n:1740000
KS ci ratio: 1.005682e-01	ci left: 8.285312e-04	ci right 9.168218e-04	k: 1517	n:1740000
MEGF6   1740000 perm   1401 sec   (1242 perm/sec)   p_kst 8.718391e-04   p_cons 5.797126e-03   p_joint 4.977011e-04

Joint ci ratio: 1.325628e-01	ci left: 4.663176e-04	ci right 5.330678e-04	k: 873	n:1750000
Cons ci ratio: 3.880202e-02	ci left: 5.685762e-03	ci right 5.911307e-03	k: 10146	n:1750000
KS ci ratio: 1.001729e-01	ci left: 8.304818e-04	ci right 9.186120e-04	k: 1529	n:1750000
MEGF6   1750000 perm   1415 sec   (1236 perm/sec)   p_kst 8.737143e-04   p_cons 5.797714e-03   p_joint 4.988571e-04

Joint ci ratio: 1.316618e-01	ci left: 4.702609e-04	ci right 5.370823e-04	k: 885	n:1760000
Cons ci ratio: 3.868398e-02	ci left: 5.688343e-03	ci right 5.913288e-03	k: 10208	n:1760000
KS ci ratio: 1.000097e-01	ci left: 8.285329e-04	ci right 9.163047e-04	k: 1534	n:1760000
MEGF6   1760000 perm   1429 sec   (1232 perm/sec)   p_kst 8.715909e-04   p_cons 5.800000e-03   p_joint 5.028409e-04

Joint ci ratio: 1.312182e-01	ci left: 4.708825e-04	ci right 5.375492e-04	k: 891	n:1770000
Cons ci ratio: 3.858590e-02	ci left: 5.685300e-03	ci right 5.909542e-03	k: 10260	n:1770000
KS ci ratio: 9.971782e-02	ci left: 8.288097e-04	ci right 9.163395e-04	k: 1543	n:1770000
MEGF6   1770000 perm   1443 sec   (1227 perm/sec)   p_kst 8.717514e-04   p_cons 5.796610e-03   p_joint 5.033898e-04

Joint ci ratio: 1.307791e-01	ci left: 4.714974e-04	ci right 5.380104e-04	k: 897	n:1780000
Cons ci ratio: 3.849231e-02	ci left: 5.681179e-03	ci right 5.904703e-03	k: 10310	n:1780000
KS ci ratio: 9.933247e-02	ci left: 8.307273e-04	ci right 9.181008e-04	k: 1555	n:1780000
MEGF6   1780000 perm   1457 sec   (1222 perm/sec)   p_kst 8.735955e-04   p_cons 5.792135e-03   p_joint 5.039326e-04

Joint ci ratio: 1.303443e-01	ci left: 4.721058e-04	ci right 5.384661e-04	k: 903	n:1790000
Cons ci ratio: 3.841246e-02	ci left: 5.673231e-03	ci right 5.895970e-03	k: 10353	n:1790000
KS ci ratio: 9.910984e-02	ci left: 8.298999e-04	ci right 9.169794e-04	k: 1562	n:1790000
MEGF6   1790000 perm   1471 sec   (1217 perm/sec)   p_kst 8.726257e-04   p_cons 5.783799e-03   p_joint 5.044693e-04

Joint ci ratio: 1.302005e-01	ci left: 4.705579e-04	ci right 5.366220e-04	k: 905	n:1800000
Cons ci ratio: 3.831643e-02	ci left: 5.670325e-03	ci right 5.892381e-03	k: 10405	n:1800000
KS ci ratio: 9.888869e-02	ci left: 8.290819e-04	ci right 9.158702e-04	k: 1569	n:1800000
MEGF6   1800000 perm   1485 sec   (1212 perm/sec)   p_kst 8.716667e-04   p_cons 5.780556e-03   p_joint 5.027778e-04

Joint ci ratio: 1.299855e-01	ci left: 4.695616e-04	ci right 5.353686e-04	k: 908	n:1810000
Cons ci ratio: 3.821376e-02	ci left: 5.669640e-03	ci right 5.891061e-03	k: 10461	n:1810000
KS ci ratio: 9.854402e-02	ci left: 8.304287e-04	ci right 9.170375e-04	k: 1580	n:1810000
MEGF6   1810000 perm   1500 sec   (1207 perm/sec)   p_kst 8.729282e-04   p_cons 5.779558e-03   p_joint 5.016575e-04

Joint ci ratio: 1.153074e-01	ci left: 5.980167e-04	ci right 6.717192e-04	k: 1154	n:1820000
Cons ci ratio: 3.809553e-02	ci left: 5.673862e-03	ci right 5.894748e-03	k: 10526	n:1820000
KS ci ratio: 9.832663e-02	ci left: 8.296174e-04	ci right 9.159396e-04	k: 1587	n:1820000
MEGF6   1820000 perm   1517 sec   (1200 perm/sec)   p_kst 8.719780e-04   p_cons 5.783516e-03   p_joint 6.340659e-04

Joint ci ratio: 1.292764e-01	ci left: 4.697171e-04	ci right 5.351592e-04	k: 918	n:1830000
Cons ci ratio: 3.799101e-02	ci left: 5.674250e-03	ci right 5.894531e-03	k: 10584	n:1830000
KS ci ratio: 9.795712e-02	ci left: 8.314804e-04	ci right 9.176527e-04	k: 1599	n:1830000
MEGF6   1830000 perm   1531 sec   (1195 perm/sec)   p_kst 8.737705e-04   p_cons 5.783607e-03   p_joint 5.016393e-04

Joint ci ratio: 1.289960e-01	ci left: 4.692679e-04	ci right 5.344948e-04	k: 922	n:1840000
Cons ci ratio: 3.788556e-02	ci left: 5.675173e-03	ci right 5.894865e-03	k: 10643	n:1840000
KS ci ratio: 9.762206e-02	ci left: 8.327936e-04	ci right 9.187899e-04	k: 1610	n:1840000
MEGF6   1840000 perm   1556 sec   (1182 perm/sec)   p_kst 8.750000e-04   p_cons 5.784239e-03   p_joint 5.010870e-04

Joint ci ratio: 1.285095e-01	ci left: 4.703933e-04	ci right 5.355112e-04	k: 929	n:1850000
Cons ci ratio: 3.777921e-02	ci left: 5.676622e-03	ci right 5.895740e-03	k: 10703	n:1850000
KS ci ratio: 9.726041e-02	ci left: 8.346204e-04	ci right 9.204679e-04	k: 1622	n:1850000
MEGF6   1850000 perm   1580 sec   (1171 perm/sec)   p_kst 8.767568e-04   p_cons 5.785405e-03   p_joint 5.021622e-04

Joint ci ratio: 1.283028e-01	ci left: 4.694254e-04	ci right 5.342968e-04	k: 932	n:1860000
Cons ci ratio: 3.768960e-02	ci left: 5.673263e-03	ci right 5.891721e-03	k: 10754	n:1860000
KS ci ratio: 9.705139e-02	ci left: 8.338052e-04	ci right 9.193740e-04	k: 1629	n:1860000
MEGF6   1860000 perm   1598 sec   (1164 perm/sec)   p_kst 8.758065e-04   p_cons 5.781720e-03   p_joint 5.010753e-04

Joint ci ratio: 1.278241e-01	ci left: 4.705385e-04	ci right 5.353028e-04	k: 939	n:1870000
Cons ci ratio: 3.760587e-02	ci left: 5.668351e-03	ci right 5.886125e-03	k: 10802	n:1870000
KS ci ratio: 9.669602e-02	ci left: 8.356080e-04	ci right 9.210301e-04	k: 1641	n:1870000
MEGF6   1870000 perm   1616 sec   (1157 perm/sec)   p_kst 8.775401e-04   p_cons 5.776471e-03   p_joint 5.021390e-04

Joint ci ratio: 1.277563e-01	ci left: 4.685505e-04	ci right 5.330044e-04	k: 940	n:1880000
Cons ci ratio: 3.750012e-02	ci left: 5.670343e-03	ci right 5.887567e-03	k: 10863	n:1880000
KS ci ratio: 9.631539e-02	ci left: 8.379114e-04	ci right 9.232127e-04	k: 1654	n:1880000
MEGF6   1880000 perm   1630 sec   (1153 perm/sec)   p_kst 8.797872e-04   p_cons 5.778191e-03   p_joint 5.000000e-04

Joint ci ratio: 1.275532e-01	ci left: 4.676080e-04	ci right 5.318222e-04	k: 943	n:1890000
Cons ci ratio: 3.740558e-02	ci left: 5.669169e-03	ci right 5.885789e-03	k: 10918	n:1890000
KS ci ratio: 9.605457e-02	ci left: 8.381253e-04	ci right 9.232044e-04	k: 1663	n:1890000
MEGF6   1890000 perm   1645 sec   (1149 perm/sec)   p_kst 8.798942e-04   p_cons 5.776720e-03   p_joint 4.989418e-04

Joint ci ratio: 1.269494e-01	ci left: 4.697330e-04	ci right 5.339107e-04	k: 952	n:1900000
Cons ci ratio: 3.729125e-02	ci left: 5.674265e-03	ci right 5.890403e-03	k: 10985	n:1900000
KS ci ratio: 9.591068e-02	ci left: 8.362825e-04	ci right 9.210402e-04	k: 1668	n:1900000
MEGF6   1900000 perm   1661 sec   (1144 perm/sec)   p_kst 8.778947e-04   p_cons 5.781579e-03   p_joint 5.010526e-04

Joint ci ratio: 1.266838e-01	ci left: 4.693015e-04	ci right 5.332760e-04	k: 956	n:1910000
Cons ci ratio: 3.722033e-02	ci left: 5.666342e-03	ci right 5.881758e-03	k: 11027	n:1910000
KS ci ratio: 9.562460e-02	ci left: 8.370143e-04	ci right 9.215789e-04	k: 1678	n:1910000
MEGF6   1910000 perm   1675 sec   (1140 perm/sec)   p_kst 8.785340e-04   p_cons 5.773298e-03   p_joint 5.005236e-04

Joint ci ratio: 1.264199e-01	ci left: 4.688746e-04	ci right 5.326478e-04	k: 960	n:1920000
Cons ci ratio: 3.711946e-02	ci left: 5.667789e-03	ci right 5.882664e-03	k: 11087	n:1920000
KS ci ratio: 9.539762e-02	ci left: 8.367220e-04	ci right 9.210452e-04	k: 1686	n:1920000
MEGF6   1920000 perm   1690 sec   (1136 perm/sec)   p_kst 8.781250e-04   p_cons 5.774479e-03   p_joint 5.000000e-04

Joint ci ratio: 1.259619e-01	ci left: 4.699576e-04	ci right 5.336293e-04	k: 967	n:1930000
Cons ci ratio: 3.701942e-02	ci left: 5.669222e-03	ci right 5.883560e-03	k: 11147	n:1930000
KS ci ratio: 9.514416e-02	ci left: 8.369388e-04	ci right 9.210472e-04	k: 1695	n:1930000
MEGF6   1930000 perm   1705 sec   (1132 perm/sec)   p_kst 8.782383e-04   p_cons 5.775648e-03   p_joint 5.010363e-04

Joint ci ratio: 1.256379e-01	ci left: 4.700314e-04	ci right 5.335370e-04	k: 972	n:1940000
Cons ci ratio: 3.691189e-02	ci left: 5.673195e-03	ci right 5.887047e-03	k: 11212	n:1940000
KS ci ratio: 9.494846e-02	ci left: 8.361471e-04	ci right 9.199936e-04	k: 1702	n:1940000
MEGF6   1940000 perm   1720 sec   (1128 perm/sec)   p_kst 8.773196e-04   p_cons 5.779381e-03   p_joint 5.010309e-04

Joint ci ratio: 1.214632e-01	ci left: 5.014158e-04	ci right 5.667490e-04	k: 1040	n:1950000
Cons ci ratio: 3.682666e-02	ci left: 5.670523e-03	ci right 5.883770e-03	k: 11264	n:1950000
KS ci ratio: 9.472625e-02	ci left: 8.358644e-04	ci right 9.194755e-04	k: 1710	n:1950000
MEGF6   1950000 perm   1735 sec   (1124 perm/sec)   p_kst 8.769231e-04   p_cons 5.776410e-03   p_joint 5.333333e-04

Joint ci ratio: 1.248702e-01	ci left: 4.711658e-04	ci right 5.344069e-04	k: 984	n:1960000
Cons ci ratio: 3.674037e-02	ci left: 5.668383e-03	ci right 5.881040e-03	k: 11317	n:1960000
KS ci ratio: 9.442316e-02	ci left: 8.370793e-04	ci right 9.205292e-04	k: 1721	n:1960000
MEGF6   1960000 perm   1751 sec   (1119 perm/sec)   p_kst 8.780612e-04   p_cons 5.773980e-03   p_joint 5.020408e-04

Joint ci ratio: 1.209416e-01	ci left: 5.007553e-04	ci right 5.657022e-04	k: 1049	n:1970000
Cons ci ratio: 3.665307e-02	ci left: 5.666769e-03	ci right 5.878850e-03	k: 11371	n:1970000
KS ci ratio: 9.425915e-02	ci left: 8.358040e-04	ci right 9.189740e-04	k: 1727	n:1970000
MEGF6   1970000 perm   1767 sec   (1115 perm/sec)   p_kst 8.766497e-04   p_cons 5.772081e-03   p_joint 5.324873e-04

Joint ci ratio: 1.205975e-01	ci left: 5.011650e-04	ci right 5.659669e-04	k: 1055	n:1980000
Cons ci ratio: 3.654870e-02	ci left: 5.670677e-03	ci right 5.882287e-03	k: 11436	n:1980000
KS ci ratio: 9.401464e-02	ci left: 8.360212e-04	ci right 9.189852e-04	k: 1736	n:1980000
MEGF6   1980000 perm   1784 sec   (1110 perm/sec)   p_kst 8.767677e-04   p_cons 5.775758e-03   p_joint 5.328283e-04

Joint ci ratio: 1.202563e-01	ci left: 5.015709e-04	ci right 5.662287e-04	k: 1061	n:1990000
Cons ci ratio: 3.645000e-02	ci left: 5.673053e-03	ci right 5.884168e-03	k: 11498	n:1990000
KS ci ratio: 9.374515e-02	ci left: 8.367273e-04	ci right 9.195102e-04	k: 1746	n:1990000
MEGF6   1990000 perm   1800 sec   (1106 perm/sec)   p_kst 8.773869e-04   p_cons 5.777889e-03   p_joint 5.331658e-04

Joint ci ratio: 1.236830e-01	ci left: 4.709471e-04	ci right 5.335140e-04	k: 1003	n:2000000
Cons ci ratio: 3.634893e-02	ci left: 5.676397e-03	ci right 5.887038e-03	k: 11562	n:2000000
KS ci ratio: 9.358464e-02	ci left: 8.354733e-04	ci right 9.179829e-04	k: 1752	n:2000000
MEGF6   2000000 perm   1821 sec   (1098 perm/sec)   p_kst 8.760000e-04   p_cons 5.781000e-03   p_joint 5.015000e-04

Joint ci ratio: 1.231931e-01	ci left: 4.724613e-04	ci right 5.349626e-04	k: 1011	n:2010000
Cons ci ratio: 3.623772e-02	ci left: 5.683159e-03	ci right 5.893393e-03	k: 11633	n:2010000
KS ci ratio: 9.350480e-02	ci left: 8.327743e-04	ci right 9.149434e-04	k: 1755	n:2010000
MEGF6   2010000 perm   1837 sec   (1094 perm/sec)   p_kst 8.731343e-04   p_cons 5.787562e-03   p_joint 5.029851e-04

Joint ci ratio: 1.231324e-01	ci left: 4.706022e-04	ci right 5.328246e-04	k: 1012	n:2020000
Cons ci ratio: 3.615395e-02	ci left: 5.681515e-03	ci right 5.891192e-03	k: 11687	n:2020000
KS ci ratio: 9.334553e-02	ci left: 8.315525e-04	ci right 9.134536e-04	k: 1761	n:2020000
MEGF6   2020000 perm   1853 sec   (1090 perm/sec)   p_kst 8.717822e-04   p_cons 5.785644e-03   p_joint 5.009901e-04

Joint ci ratio: 1.230111e-01	ci left: 4.692388e-04	ci right 5.312154e-04	k: 1014	n:2030000
Cons ci ratio: 3.606303e-02	ci left: 5.682329e-03	ci right 5.891498e-03	k: 11746	n:2030000
KS ci ratio: 9.321345e-02	ci left: 8.298618e-04	ci right 9.114744e-04	k: 1766	n:2030000
MEGF6   2030000 perm   1869 sec   (1086 perm/sec)   p_kst 8.699507e-04   p_cons 5.786207e-03   p_joint 4.995074e-04

Joint ci ratio: 1.227695e-01	ci left: 4.688391e-04	ci right 5.306324e-04	k: 1018	n:2040000
Cons ci ratio: 3.598506e-02	ci left: 5.679250e-03	ci right 5.887843e-03	k: 11797	n:2040000
KS ci ratio: 9.302940e-02	ci left: 8.291453e-04	ci right 9.105177e-04	k: 1773	n:2040000
MEGF6   2040000 perm   1885 sec   (1082 perm/sec)   p_kst 8.691176e-04   p_cons 5.782843e-03   p_joint 4.990196e-04

Joint ci ratio: 1.223499e-01	ci left: 4.698621e-04	ci right 5.315632e-04	k: 1025	n:2050000
Cons ci ratio: 3.590455e-02	ci left: 5.677167e-03	ci right 5.885208e-03	k: 11850	n:2050000
KS ci ratio: 9.284644e-02	ci left: 8.284359e-04	ci right 9.095701e-04	k: 1780	n:2050000
MEGF6   2050000 perm   1901 sec   (1078 perm/sec)   p_kst 8.682927e-04   p_cons 5.780488e-03   p_joint 5.000000e-04

Joint ci ratio: 1.221715e-01	ci left: 4.689930e-04	ci right 5.304836e-04	k: 1028	n:2060000
Cons ci ratio: 3.582609e-02	ci left: 5.674624e-03	ci right 5.882109e-03	k: 11902	n:2060000
KS ci ratio: 9.256099e-02	ci left: 8.296304e-04	ci right 9.106183e-04	k: 1791	n:2060000
MEGF6   2060000 perm   1917 sec   (1075 perm/sec)   p_kst 8.694175e-04   p_cons 5.777670e-03   p_joint 4.990291e-04

Joint ci ratio: 1.218757e-01	ci left: 4.690690e-04	ci right 5.304101e-04	k: 1033	n:2070000
Cons ci ratio: 3.573611e-02	ci left: 5.675937e-03	ci right 5.882937e-03	k: 11962	n:2070000
KS ci ratio: 9.245796e-02	ci left: 8.275102e-04	ci right 9.081962e-04	k: 1795	n:2070000
MEGF6   2070000 perm   1933 sec   (1071 perm/sec)   p_kst 8.671498e-04   p_cons 5.778744e-03   p_joint 4.990338e-04

Joint ci ratio: 1.216994e-01	ci left: 4.682122e-04	ci right 5.293463e-04	k: 1036	n:2080000
Cons ci ratio: 3.563787e-02	ci left: 5.680097e-03	ci right 5.886668e-03	k: 12028	n:2080000
KS ci ratio: 9.215055e-02	ci left: 8.291679e-04	ci right 9.097323e-04	k: 1807	n:2080000
MEGF6   2080000 perm   1949 sec   (1067 perm/sec)   p_kst 8.687500e-04   p_cons 5.782692e-03   p_joint 4.980769e-04

Joint ci ratio: 1.215238e-01	ci left: 4.673637e-04	ci right 5.282926e-04	k: 1039	n:2090000
Cons ci ratio: 3.555818e-02	ci left: 5.678526e-03	ci right 5.884569e-03	k: 12082	n:2090000
KS ci ratio: 9.194736e-02	ci left: 8.289402e-04	ci right 9.092953e-04	k: 1815	n:2090000
MEGF6   2090000 perm   1965 sec   (1064 perm/sec)   p_kst 8.684211e-04   p_cons 5.780861e-03   p_joint 4.971292e-04

Joint ci ratio: 1.213489e-01	ci left: 4.665233e-04	ci right 5.272489e-04	k: 1042	n:2100000
Cons ci ratio: 3.547755e-02	ci left: 5.677444e-03	ci right 5.882971e-03	k: 12137	n:2100000
KS ci ratio: 9.172036e-02	ci left: 8.291801e-04	ci right 9.093494e-04	k: 1824	n:2100000
MEGF6   2100000 perm   1981 sec   (1060 perm/sec)   p_kst 8.685714e-04   p_cons 5.779524e-03   p_joint 4.961905e-04

Joint ci ratio: 1.209437e-01	ci left: 4.675294e-04	ci right 5.281681e-04	k: 1049	n:2110000
Cons ci ratio: 3.540039e-02	ci left: 5.675432e-03	ci right 5.880430e-03	k: 12190	n:2110000
KS ci ratio: 9.134560e-02	ci left: 8.321967e-04	ci right 9.123114e-04	k: 1839	n:2110000
MEGF6   2110000 perm   1998 sec   (1056 perm/sec)   p_kst 8.715640e-04   p_cons 5.777251e-03   p_joint 4.971564e-04

Joint ci ratio: 1.207140e-01	ci left: 4.671538e-04	ci right 5.276205e-04	k: 1053	n:2120000
Cons ci ratio: 3.532228e-02	ci left: 5.673908e-03	ci right 5.878389e-03	k: 12244	n:2120000
KS ci ratio: 9.092634e-02	ci left: 8.361074e-04	ci right 9.162095e-04	k: 1856	n:2120000
MEGF6   2120000 perm   2014 sec   (1053 perm/sec)   p_kst 8.754717e-04   p_cons 5.775472e-03   p_joint 4.966981e-04

Joint ci ratio: 1.206569e-01	ci left: 4.654159e-04	ci right 5.256271e-04	k: 1054	n:2130000
Cons ci ratio: 3.523460e-02	ci left: 5.675656e-03	ci right 5.879682e-03	k: 12305	n:2130000
KS ci ratio: 9.068248e-02	ci left: 8.367703e-04	ci right 9.167094e-04	k: 1866	n:2130000
MEGF6   2130000 perm   2031 sec   (1049 perm/sec)   p_kst 8.760563e-04   p_cons 5.776995e-03   p_joint 4.948357e-04

Joint ci ratio: 1.203152e-01	ci left: 4.659603e-04	ci right 5.260591e-04	k: 1060	n:2140000
Cons ci ratio: 3.516473e-02	ci left: 5.671829e-03	ci right 5.875306e-03	k: 12354	n:2140000
KS ci ratio: 9.048883e-02	ci left: 8.365138e-04	ci right 9.162487e-04	k: 1874	n:2140000
MEGF6   2140000 perm   2048 sec   (1045 perm/sec)   p_kst 8.757009e-04   p_cons 5.772897e-03   p_joint 4.953271e-04

Joint ci ratio: 1.200891e-01	ci left: 4.655975e-04	ci right 5.255287e-04	k: 1064	n:2150000
Cons ci ratio: 3.509670e-02	ci left: 5.667578e-03	ci right 5.870501e-03	k: 12402	n:2150000
KS ci ratio: 9.044075e-02	ci left: 8.335321e-04	ci right 9.129385e-04	k: 1876	n:2150000
MEGF6   2150000 perm   2065 sec   (1041 perm/sec)   p_kst 8.725581e-04   p_cons 5.768372e-03   p_joint 4.948837e-04

Joint ci ratio: 1.200329e-01	ci left: 4.638910e-04	ci right 5.235726e-04	k: 1065	n:2160000
Cons ci ratio: 3.501634e-02	ci left: 5.667497e-03	ci right 5.869943e-03	k: 12459	n:2160000
KS ci ratio: 9.027262e-02	ci left: 8.328407e-04	ci right 9.120259e-04	k: 1883	n:2160000
MEGF6   2160000 perm   2083 sec   (1037 perm/sec)   p_kst 8.717593e-04   p_cons 5.768056e-03   p_joint 4.930556e-04

Joint ci ratio: 1.198083e-01	ci left: 4.635413e-04	ci right 5.230584e-04	k: 1069	n:2170000
Cons ci ratio: 3.491549e-02	ci left: 5.674269e-03	ci right 5.876362e-03	k: 12531	n:2170000
KS ci ratio: 9.010542e-02	ci left: 8.321558e-04	ci right 9.111215e-04	k: 1890	n:2170000
MEGF6   2170000 perm   2099 sec   (1034 perm/sec)   p_kst 8.709677e-04   p_cons 5.774654e-03   p_joint 4.926267e-04

Joint ci ratio: 1.196966e-01	ci left: 4.623049e-04	ci right 5.216039e-04	k: 1071	n:2180000
Cons ci ratio: 3.485725e-02	ci left: 5.667338e-03	ci right 5.868841e-03	k: 12573	n:2180000
KS ci ratio: 8.982080e-02	ci left: 8.337193e-04	ci right 9.125704e-04	k: 1902	n:2180000
MEGF6   2180000 perm   2116 sec   (1030 perm/sec)   p_kst 8.724771e-04   p_cons 5.767431e-03   p_joint 4.912844e-04

Joint ci ratio: 1.194184e-01	ci left: 4.624087e-04	ci right 5.215735e-04	k: 1076	n:2190000
Cons ci ratio: 3.477990e-02	ci left: 5.666808e-03	ci right 5.867836e-03	k: 12629	n:2190000
KS ci ratio: 8.958571e-02	ci left: 8.343762e-04	ci right 9.130720e-04	k: 1912	n:2190000
MEGF6   2190000 perm   2133 sec   (1027 perm/sec)   p_kst 8.730594e-04   p_cons 5.766667e-03   p_joint 4.913242e-04

Joint ci ratio: 1.189224e-01	ci left: 4.642759e-04	ci right 5.234155e-04	k: 1085	n:2200000
Cons ci ratio: 3.469207e-02	ci left: 5.669888e-03	ci right 5.870507e-03	k: 12693	n:2200000
KS ci ratio: 8.939899e-02	ci left: 8.341385e-04	ci right 9.126394e-04	k: 1920	n:2200000
MEGF6   2200000 perm   2150 sec   (1023 perm/sec)   p_kst 8.727273e-04   p_cons 5.769545e-03   p_joint 4.931818e-04

Joint ci ratio: 1.187586e-01	ci left: 4.634922e-04	ci right 5.224449e-04	k: 1088	n:2210000
Cons ci ratio: 3.461854e-02	ci left: 5.668455e-03	ci right 5.868590e-03	k: 12747	n:2210000
KS ci ratio: 8.921343e-02	ci left: 8.339032e-04	ci right 9.122106e-04	k: 1928	n:2210000
MEGF6   2210000 perm   2169 sec   (1019 perm/sec)   p_kst 8.723982e-04   p_cons 5.767873e-03   p_joint 4.923077e-04

Joint ci ratio: 1.185411e-01	ci left: 4.631527e-04	ci right 5.219468e-04	k: 1092	n:2220000
Cons ci ratio: 3.454277e-02	ci left: 5.667929e-03	ci right 5.867598e-03	k: 12803	n:2220000
KS ci ratio: 8.912117e-02	ci left: 8.319085e-04	ci right 9.099435e-04	k: 1932	n:2220000
MEGF6   2220000 perm   2186 sec   (1015 perm/sec)   p_kst 8.702703e-04   p_cons 5.767117e-03   p_joint 4.918919e-04

Joint ci ratio: 1.183248e-01	ci left: 4.628164e-04	ci right 5.214531e-04	k: 1096	n:2230000
Cons ci ratio: 3.447153e-02	ci left: 5.666074e-03	ci right 5.865258e-03	k: 12856	n:2230000
KS ci ratio: 8.886862e-02	ci left: 8.330009e-04	ci right 9.109055e-04	k: 1943	n:2230000
MEGF6   2230000 perm   2204 sec   (1012 perm/sec)   p_kst 8.713004e-04   p_cons 5.765022e-03   p_joint 4.914798e-04

Joint ci ratio: 1.181097e-01	ci left: 4.624831e-04	ci right 5.209637e-04	k: 1100	n:2240000
Cons ci ratio: 3.439672e-02	ci left: 5.665564e-03	ci right 5.864289e-03	k: 12912	n:2240000
KS ci ratio: 8.870909e-02	ci left: 8.323378e-04	ci right 9.100334e-04	k: 1950	n:2240000
MEGF6   2240000 perm   2221 sec   (1009 perm/sec)   p_kst 8.705357e-04   p_cons 5.764286e-03   p_joint 4.910714e-04

Joint ci ratio: 1.177360e-01	ci left: 4.634470e-04	ci right 5.218511e-04	k: 1107	n:2250000
Cons ci ratio: 3.430775e-02	ci left: 5.669905e-03	ci right 5.868259e-03	k: 12979	n:2250000
KS ci ratio: 8.850518e-02	ci left: 8.325498e-04	ci right 9.100774e-04	k: 1959	n:2250000
MEGF6   2250000 perm   2254 sec   (998 perm/sec)   p_kst 8.706667e-04   p_cons 5.768444e-03   p_joint 4.920000e-04

Joint ci ratio: 1.174184e-01	ci left: 4.639732e-04	ci right 5.222749e-04	k: 1113	n:2260000
Cons ci ratio: 3.423928e-02	ci left: 5.667629e-03	ci right 5.865499e-03	k: 13031	n:2260000
KS ci ratio: 8.832512e-02	ci left: 8.323275e-04	ci right 9.096686e-04	k: 1967	n:2260000
MEGF6   2260000 perm   2277 sec   (993 perm/sec)   p_kst 8.703540e-04   p_cons 5.765929e-03   p_joint 4.924779e-04

Joint ci ratio: 1.172082e-01	ci left: 4.636396e-04	ci right 5.217880e-04	k: 1117	n:2270000
Cons ci ratio: 3.416728e-02	ci left: 5.666683e-03	ci right 5.864096e-03	k: 13086	n:2270000
KS ci ratio: 8.814616e-02	ci left: 8.321074e-04	ci right 9.092632e-04	k: 1975	n:2270000
MEGF6   2270000 perm   2294 sec   (989 perm/sec)   p_kst 8.700441e-04   p_cons 5.764758e-03   p_joint 4.920705e-04

Joint ci ratio: 1.170513e-01	ci left: 4.628833e-04	ci right 5.208538e-04	k: 1120	n:2280000
Cons ci ratio: 3.409182e-02	ci left: 5.667051e-03	ci right 5.864032e-03	k: 13144	n:2280000
KS ci ratio: 8.794610e-02	ci left: 8.323182e-04	ci right 9.093095e-04	k: 1984	n:2280000
MEGF6   2280000 perm   2312 sec   (986 perm/sec)   p_kst 8.701754e-04   p_cons 5.764912e-03   p_joint 4.912281e-04

Joint ci ratio: 1.168951e-01	ci left: 4.621337e-04	ci right 5.199277e-04	k: 1123	n:2290000
Cons ci ratio: 3.400131e-02	ci left: 5.672612e-03	ci right 5.869253e-03	k: 13214	n:2290000
KS ci ratio: 8.781354e-02	ci left: 8.312461e-04	ci right 9.080164e-04	k: 1990	n:2290000
MEGF6   2290000 perm   2330 sec   (983 perm/sec)   p_kst 8.689956e-04   p_cons 5.770306e-03   p_joint 4.903930e-04

Joint ci ratio: 1.166877e-01	ci left: 4.618128e-04	ci right 5.194570e-04	k: 1127	n:2300000
Cons ci ratio: 3.393594e-02	ci left: 5.669934e-03	ci right 5.866096e-03	k: 13265	n:2300000
KS ci ratio: 8.765961e-02	ci left: 8.306087e-04	ci right 9.071787e-04	k: 1997	n:2300000
MEGF6   2300000 perm   2348 sec   (980 perm/sec)   p_kst 8.682609e-04   p_cons 5.767391e-03   p_joint 4.900000e-04

Joint ci ratio: 1.165328e-01	ci left: 4.610744e-04	ci right 5.185449e-04	k: 1130	n:2310000
Cons ci ratio: 3.387094e-02	ci left: 5.667279e-03	ci right 5.862967e-03	k: 13316	n:2310000
KS ci ratio: 8.741925e-02	ci left: 8.316707e-04	ci right 9.081176e-04	k: 2008	n:2310000
MEGF6   2310000 perm   2365 sec   (977 perm/sec)   p_kst 8.692641e-04   p_cons 5.764502e-03   p_joint 4.891775e-04

Joint ci ratio: 1.196425e-01	ci left: 4.348249e-04	ci right 4.905722e-04	k: 1072	n:2320000
Cons ci ratio: 3.378218e-02	ci left: 5.672769e-03	ci right 5.868123e-03	k: 13386	n:2320000
KS ci ratio: 8.720246e-02	ci left: 8.323021e-04	ci right 9.086078e-04	k: 2018	n:2320000
MEGF6   2320000 perm   2383 sec   (973 perm/sec)   p_kst 8.698276e-04   p_cons 5.769828e-03   p_joint 4.620690e-04

Joint ci ratio: 1.192541e-01	ci left: 4.358733e-04	ci right 4.915607e-04	k: 1079	n:2330000
Cons ci ratio: 3.371050e-02	ci left: 5.672679e-03	ci right 5.867608e-03	k: 13443	n:2330000
KS ci ratio: 8.698728e-02	ci left: 8.329284e-04	ci right 9.090934e-04	k: 2028	n:2330000
MEGF6   2330000 perm   2401 sec   (971 perm/sec)   p_kst 8.703863e-04   p_cons 5.769528e-03   p_joint 4.630901e-04

Joint ci ratio: 1.190889e-01	ci left: 4.352544e-04	ci right 4.907803e-04	k: 1082	n:2340000
Cons ci ratio: 3.363927e-02	ci left: 5.672591e-03	ci right 5.867097e-03	k: 13500	n:2340000
KS ci ratio: 8.681632e-02	ci left: 8.327134e-04	ci right 9.087015e-04	k: 2036	n:2340000
MEGF6   2340000 perm   2419 sec   (967 perm/sec)   p_kst 8.700855e-04   p_cons 5.769231e-03   p_joint 4.623932e-04

Joint ci ratio: 1.188149e-01	ci left: 4.354666e-04	ci right 4.908828e-04	k: 1087	n:2350000
Cons ci ratio: 3.358219e-02	ci left: 5.667862e-03	ci right 5.861870e-03	k: 13546	n:2350000
KS ci ratio: 8.666756e-02	ci left: 8.320840e-04	ci right 9.078780e-04	k: 2043	n:2350000
MEGF6   2350000 perm   2437 sec   (964 perm/sec)   p_kst 8.693617e-04   p_cons 5.764255e-03   p_joint 4.625532e-04

Joint ci ratio: 1.186515e-01	ci left: 4.348548e-04	ci right 4.901117e-04	k: 1090	n:2360000
Cons ci ratio: 3.351796e-02	ci left: 5.665695e-03	ci right 5.859250e-03	k: 13598	n:2360000
KS ci ratio: 8.647738e-02	ci left: 8.322893e-04	ci right 9.079272e-04	k: 2052	n:2360000
MEGF6   2360000 perm   2455 sec   (961 perm/sec)   p_kst 8.694915e-04   p_cons 5.761864e-03   p_joint 4.618644e-04

Joint ci ratio: 1.184346e-01	ci left: 4.346577e-04	ci right 4.897816e-04	k: 1094	n:2370000
Cons ci ratio: 3.344055e-02	ci left: 5.668149e-03	ci right 5.861332e-03	k: 13661	n:2370000
KS ci ratio: 8.635134e-02	ci left: 8.312544e-04	ci right 9.066826e-04	k: 2058	n:2370000
MEGF6   2370000 perm   2473 sec   (958 perm/sec)   p_kst 8.683544e-04   p_cons 5.764135e-03   p_joint 4.616034e-04

Joint ci ratio: 1.183266e-01	ci left: 4.336469e-04	ci right 4.885889e-04	k: 1096	n:2380000
Cons ci ratio: 3.337713e-02	ci left: 5.665999e-03	ci right 5.858736e-03	k: 13713	n:2380000
KS ci ratio: 8.614238e-02	ci left: 8.318728e-04	ci right 9.071653e-04	k: 2068	n:2380000
MEGF6   2380000 perm   2491 sec   (955 perm/sec)   p_kst 8.689076e-04   p_cons 5.761765e-03   p_joint 4.605042e-04

Joint ci ratio: 1.181652e-01	ci left: 4.330506e-04	ci right 4.878369e-04	k: 1099	n:2390000
Cons ci ratio: 3.330677e-02	ci left: 5.666357e-03	ci right 5.858693e-03	k: 13771	n:2390000
KS ci ratio: 8.591426e-02	ci left: 8.328957e-04	ci right 9.080711e-04	k: 2079	n:2390000
MEGF6   2390000 perm   2509 sec   (953 perm/sec)   p_kst 8.698745e-04   p_cons 5.761925e-03   p_joint 4.598326e-04

Joint ci ratio: 1.180045e-01	ci left: 4.324592e-04	ci right 4.870912e-04	k: 1102	n:2400000
Cons ci ratio: 3.325984e-02	ci left: 5.658862e-03	ci right 5.850667e-03	k: 13810	n:2400000
KS ci ratio: 8.577009e-02	ci left: 8.322793e-04	ci right 9.072668e-04	k: 2086	n:2400000
MEGF6   2400000 perm   2533 sec   (947 perm/sec)   p_kst 8.691667e-04   p_cons 5.754167e-03   p_joint 4.591667e-04

Joint ci ratio: 1.176317e-01	ci left: 4.334838e-04	ci right 4.880602e-04	k: 1109	n:2410000
Cons ci ratio: 3.319383e-02	ci left: 5.658013e-03	ci right 5.849401e-03	k: 13865	n:2410000
KS ci ratio: 8.552450e-02	ci left: 8.336985e-04	ci right 9.085880e-04	k: 2098	n:2410000
MEGF6   2410000 perm   2556 sec   (943 perm/sec)   p_kst 8.705394e-04   p_cons 5.753112e-03   p_joint 4.601660e-04

Joint ci ratio: 1.171053e-01	ci left: 4.357035e-04	ci right 4.902968e-04	k: 1119	n:2420000
Cons ci ratio: 3.313420e-02	ci left: 5.655123e-03	ci right 5.846063e-03	k: 13915	n:2420000
KS ci ratio: 8.538228e-02	ci left: 8.330842e-04	ci right 9.077879e-04	k: 2105	n:2420000
MEGF6   2420000 perm   2578 sec   (939 perm/sec)   p_kst 8.698347e-04   p_cons 5.750000e-03   p_joint 4.623967e-04

Joint ci ratio: 1.170009e-01	ci left: 4.347094e-04	ci right 4.891263e-04	k: 1121	n:2430000
Cons ci ratio: 3.307012e-02	ci left: 5.653889e-03	ci right 5.844411e-03	k: 13969	n:2430000
KS ci ratio: 8.518026e-02	ci left: 8.336834e-04	ci right 9.082551e-04	k: 2115	n:2430000
MEGF6   2430000 perm   2606 sec   (932 perm/sec)   p_kst 8.703704e-04   p_cons 5.748560e-03   p_joint 4.613169e-04

Joint ci ratio: 1.168448e-01	ci left: 4.341214e-04	ci right 4.883871e-04	k: 1124	n:2440000
Cons ci ratio: 3.300405e-02	ci left: 5.653478e-03	ci right 5.843599e-03	k: 14025	n:2440000
KS ci ratio: 8.505980e-02	ci left: 8.326733e-04	ci right 9.070441e-04	k: 2121	n:2440000
MEGF6   2440000 perm   2625 sec   (929 perm/sec)   p_kst 8.692623e-04   p_cons 5.747951e-03   p_joint 4.606557e-04

Joint ci ratio: 1.165345e-01	ci left: 4.347269e-04	ci right 4.889141e-04	k: 1130	n:2450000
Cons ci ratio: 3.293014e-02	ci left: 5.655905e-03	ci right 5.845674e-03	k: 14088	n:2450000
KS ci ratio: 8.491988e-02	ci left: 8.320710e-04	ci right 9.062598e-04	k: 2128	n:2450000
MEGF6   2450000 perm   2644 sec   (927 perm/sec)   p_kst 8.685714e-04   p_cons 5.750204e-03   p_joint 4.612245e-04

Joint ci ratio: 1.163290e-01	ci left: 4.345384e-04	ci right 4.886000e-04	k: 1134	n:2460000
Cons ci ratio: 3.286256e-02	ci left: 5.656297e-03	ci right 5.845682e-03	k: 14146	n:2460000
KS ci ratio: 8.476079e-02	ci left: 8.318717e-04	ci right 9.058968e-04	k: 2136	n:2460000
MEGF6   2460000 perm   2663 sec   (924 perm/sec)   p_kst 8.682927e-04   p_cons 5.750407e-03   p_joint 4.609756e-04

Joint ci ratio: 1.161756e-01	ci left: 4.339584e-04	ci right 4.878718e-04	k: 1137	n:2470000
Cons ci ratio: 3.278728e-02	ci left: 5.659497e-03	ci right 5.848547e-03	k: 14211	n:2470000
KS ci ratio: 8.470146e-02	ci left: 8.296926e-04	ci right 9.034695e-04	k: 2139	n:2470000
MEGF6   2470000 perm   2681 sec   (921 perm/sec)   p_kst 8.659919e-04   p_cons 5.753441e-03   p_joint 4.603239e-04

Joint ci ratio: 1.157693e-01	ci left: 4.353408e-04	ci right 4.892239e-04	k: 1145	n:2480000
Cons ci ratio: 3.272634e-02	ci left: 5.657873e-03	ci right 5.846510e-03	k: 14264	n:2480000
KS ci ratio: 8.448456e-02	ci left: 8.306887e-04	ci right 9.043558e-04	k: 2150	n:2480000
MEGF6   2480000 perm   2704 sec   (917 perm/sec)   p_kst 8.669355e-04   p_cons 5.751613e-03   p_joint 4.616935e-04

Joint ci ratio: 1.153672e-01	ci left: 4.367125e-04	ci right 4.905648e-04	k: 1153	n:2490000
Cons ci ratio: 3.266116e-02	ci left: 5.657855e-03	ci right 5.846109e-03	k: 14321	n:2490000
KS ci ratio: 8.428884e-02	ci left: 8.312839e-04	ci right 9.048246e-04	k: 2160	n:2490000
MEGF6   2490000 perm   2723 sec   (914 perm/sec)   p_kst 8.674699e-04   p_cons 5.751406e-03   p_joint 4.630522e-04

Joint ci ratio: 1.150684e-01	ci left: 4.372964e-04	ci right 4.910717e-04	k: 1159	n:2500000
Cons ci ratio: 3.259180e-02	ci left: 5.659424e-03	ci right 5.847323e-03	k: 14382	n:2500000
KS ci ratio: 8.407509e-02	ci left: 8.322662e-04	ci right 9.056979e-04	k: 2171	n:2500000
MEGF6   2500000 perm   2742 sec   (912 perm/sec)   p_kst 8.684000e-04   p_cons 5.752800e-03   p_joint 4.636000e-04

Joint ci ratio: 1.148706e-01	ci left: 4.371020e-04	ci right 4.907546e-04	k: 1163	n:2510000
Cons ci ratio: 3.251722e-02	ci left: 5.662958e-03	ci right 5.850536e-03	k: 14448	n:2510000
KS ci ratio: 8.397855e-02	ci left: 8.309005e-04	ci right 9.041235e-04	k: 2176	n:2510000
MEGF6   2510000 perm   2762 sec   (909 perm/sec)   p_kst 8.669323e-04   p_cons 5.756175e-03   p_joint 4.633466e-04

Joint ci ratio: 1.147721e-01	ci left: 4.361383e-04	ci right 4.896236e-04	k: 1165	n:2520000
Cons ci ratio: 3.245553e-02	ci left: 5.662134e-03	ci right 5.849322e-03	k: 14503	n:2520000
KS ci ratio: 8.384388e-02	ci left: 8.303228e-04	ci right 9.033717e-04	k: 2183	n:2520000
MEGF6   2520000 perm   2782 sec   (906 perm/sec)   p_kst 8.662698e-04   p_cons 5.755159e-03   p_joint 4.623016e-04

Joint ci ratio: 1.146738e-01	ci left: 4.351823e-04	ci right 4.885016e-04	k: 1167	n:2530000
Cons ci ratio: 3.238747e-02	ci left: 5.663669e-03	ci right 5.850508e-03	k: 14564	n:2530000
KS ci ratio: 8.372899e-02	ci left: 8.293627e-04	ci right 9.022223e-04	k: 2189	n:2530000
MEGF6   2530000 perm   2801 sec   (903 perm/sec)   p_kst 8.652174e-04   p_cons 5.756522e-03   p_joint 4.612648e-04

Joint ci ratio: 1.145269e-01	ci left: 4.346162e-04	ci right 4.877933e-04	k: 1170	n:2540000
Cons ci ratio: 3.231317e-02	ci left: 5.667536e-03	ci right 5.854066e-03	k: 14631	n:2540000
KS ci ratio: 8.346256e-02	ci left: 8.314941e-04	ci right 9.042972e-04	k: 2203	n:2540000
MEGF6   2540000 perm   2821 sec   (900 perm/sec)   p_kst 8.673228e-04   p_cons 5.760236e-03   p_joint 4.606299e-04

Joint ci ratio: 1.141860e-01	ci left: 4.355784e-04	ci right 4.887039e-04	k: 1177	n:2550000
Cons ci ratio: 3.225153e-02	ci left: 5.667094e-03	ci right 5.853247e-03	k: 14687	n:2550000
KS ci ratio: 8.331150e-02	ci left: 8.313052e-04	ci right 9.039536e-04	k: 2211	n:2550000
MEGF6   2550000 perm   2841 sec   (898 perm/sec)   p_kst 8.670588e-04   p_cons 5.759608e-03   p_joint 4.615686e-04

Joint ci ratio: 1.140893e-01	ci left: 4.346359e-04	ci right 4.875985e-04	k: 1179	n:2560000
Cons ci ratio: 3.219902e-02	ci left: 5.663555e-03	ci right 5.849284e-03	k: 14735	n:2560000
KS ci ratio: 8.318002e-02	ci left: 8.307354e-04	ci right 9.032139e-04	k: 2218	n:2560000
MEGF6   2560000 perm   2863 sec   (894 perm/sec)   p_kst 8.664062e-04   p_cons 5.755859e-03   p_joint 4.605469e-04

Joint ci ratio: 1.138483e-01	ci left: 4.348348e-04	ci right 4.877022e-04	k: 1184	n:2570000
Cons ci ratio: 3.214130e-02	ci left: 5.661975e-03	ci right 5.847313e-03	k: 14788	n:2570000
KS ci ratio: 8.303049e-02	ci left: 8.305511e-04	ci right 9.028769e-04	k: 2226	n:2570000
MEGF6   2570000 perm   2883 sec   (891 perm/sec)   p_kst 8.661479e-04   p_cons 5.754086e-03   p_joint 4.607004e-04

Joint ci ratio: 1.136089e-01	ci left: 4.350322e-04	ci right 4.878050e-04	k: 1189	n:2580000
Cons ci ratio: 3.208389e-02	ci left: 5.660407e-03	ci right 5.845356e-03	k: 14841	n:2580000
KS ci ratio: 8.282615e-02	ci left: 8.315071e-04	ci right 9.037293e-04	k: 2237	n:2580000
MEGF6   2580000 perm   2904 sec   (888 perm/sec)   p_kst 8.670543e-04   p_cons 5.752326e-03   p_joint 4.608527e-04

Joint ci ratio: 1.133235e-01	ci left: 4.356034e-04	ci right 4.883039e-04	k: 1195	n:2590000
Cons ci ratio: 3.202895e-02	ci left: 5.658085e-03	ci right 5.842636e-03	k: 14892	n:2590000
KS ci ratio: 8.262332e-02	ci left: 8.324559e-04	ci right 9.045750e-04	k: 2248	n:2590000
MEGF6   2590000 perm   2923 sec   (886 perm/sec)   p_kst 8.679537e-04   p_cons 5.749807e-03   p_joint 4.613900e-04

Joint ci ratio: 1.132290e-01	ci left: 4.346754e-04	ci right 4.872168e-04	k: 1197	n:2600000
Cons ci ratio: 3.196568e-02	ci left: 5.658834e-03	ci right 5.843038e-03	k: 14951	n:2600000
KS ci ratio: 8.234905e-02	ci left: 8.349044e-04	ci right 9.069840e-04	k: 2263	n:2600000
MEGF6   2600000 perm   2943 sec   (884 perm/sec)   p_kst 8.703846e-04   p_cons 5.750385e-03   p_joint 4.603846e-04

Joint ci ratio: 1.128527e-01	ci left: 4.359885e-04	ci right 4.885018e-04	k: 1205	n:2610000
Cons ci ratio: 3.189959e-02	ci left: 5.660718e-03	ci right 5.844596e-03	k: 15013	n:2610000
KS ci ratio: 8.222207e-02	ci left: 8.343323e-04	ci right 9.062461e-04	k: 2270	n:2610000
MEGF6   2610000 perm   2962 sec   (881 perm/sec)   p_kst 8.697318e-04   p_cons 5.752107e-03   p_joint 4.616858e-04

Joint ci ratio: 1.126195e-01	ci left: 4.361790e-04	ci right 4.885995e-04	k: 1210	n:2620000
Cons ci ratio: 3.183708e-02	ci left: 5.661452e-03	ci right 5.844987e-03	k: 15072	n:2620000
KS ci ratio: 8.207764e-02	ci left: 8.341385e-04	ci right 9.059033e-04	k: 2278	n:2620000
MEGF6   2620000 perm   2982 sec   (879 perm/sec)   p_kst 8.694656e-04   p_cons 5.752672e-03   p_joint 4.618321e-04

Joint ci ratio: 1.125267e-01	ci left: 4.352596e-04	ci right 4.875236e-04	k: 1212	n:2630000
Cons ci ratio: 3.177178e-02	ci left: 5.663312e-03	ci right 5.846524e-03	k: 15134	n:2630000
KS ci ratio: 8.198781e-02	ci left: 8.328290e-04	ci right 9.043990e-04	k: 2283	n:2630000
MEGF6   2630000 perm   3010 sec   (874 perm/sec)   p_kst 8.680608e-04   p_cons 5.754373e-03   p_joint 4.608365e-04

Joint ci ratio: 1.122033e-01	ci left: 4.361879e-04	ci right 4.884029e-04	k: 1219	n:2640000
Cons ci ratio: 3.171632e-02	ci left: 5.661777e-03	ci right 5.844613e-03	k: 15187	n:2640000
KS ci ratio: 8.186248e-02	ci left: 8.322716e-04	ci right 9.036791e-04	k: 2290	n:2640000
MEGF6   2640000 perm   3030 sec   (871 perm/sec)   p_kst 8.674242e-04   p_cons 5.752652e-03   p_joint 4.617424e-04

Joint ci ratio: 1.119741e-01	ci left: 4.363758e-04	ci right 4.884995e-04	k: 1224	n:2650000
Cons ci ratio: 3.166325e-02	ci left: 5.659504e-03	ci right 5.841956e-03	k: 15238	n:2650000
KS ci ratio: 8.166663e-02	ci left: 8.331970e-04	ci right 9.045047e-04	k: 2301	n:2650000
MEGF6   2650000 perm   3050 sec   (869 perm/sec)   p_kst 8.683019e-04   p_cons 5.750189e-03   p_joint 4.618868e-04

Joint ci ratio: 1.116555e-01	ci left: 4.372933e-04	ci right 4.893682e-04	k: 1231	n:2660000
Cons ci ratio: 3.160212e-02	ci left: 5.660233e-03	ci right 5.842349e-03	k: 15297	n:2660000
KS ci ratio: 8.154277e-02	ci left: 8.326426e-04	ci right 9.037896e-04	k: 2308	n:2660000
MEGF6   2660000 perm   3070 sec   (867 perm/sec)   p_kst 8.676692e-04   p_cons 5.750752e-03   p_joint 4.627820e-04

Joint ci ratio: 1.114747e-01	ci left: 4.371118e-04	ci right 4.890753e-04	k: 1235	n:2670000
Cons ci ratio: 3.155065e-02	ci left: 5.657612e-03	ci right 5.839342e-03	k: 15347	n:2670000
KS ci ratio: 8.143707e-02	ci left: 8.317254e-04	ci right 9.026976e-04	k: 2314	n:2670000
MEGF6   2670000 perm   3090 sec   (864 perm/sec)   p_kst 8.666667e-04   p_cons 5.747940e-03   p_joint 4.625468e-04

Joint ci ratio: 1.113397e-01	ci left: 4.365690e-04	ci right 4.884009e-04	k: 1238	n:2680000
Cons ci ratio: 3.149428e-02	ci left: 5.656862e-03	ci right 5.838238e-03	k: 15402	n:2680000
KS ci ratio: 8.120930e-02	ci left: 8.333741e-04	ci right 9.042787e-04	k: 2327	n:2680000
MEGF6   2680000 perm   3116 sec   (860 perm/sec)   p_kst 8.682836e-04   p_cons 5.747015e-03   p_joint 4.619403e-04

Joint ci ratio: 1.111604e-01	ci left: 4.363916e-04	ci right 4.881137e-04	k: 1242	n:2690000
Cons ci ratio: 3.143004e-02	ci left: 5.659069e-03	ci right 5.840139e-03	k: 15465	n:2690000
KS ci ratio: 8.110490e-02	ci left: 8.324613e-04	ci right 9.031928e-04	k: 2333	n:2690000
MEGF6   2690000 perm   3137 sec   (858 perm/sec)   p_kst 8.672862e-04   p_cons 5.749071e-03   p_joint 4.617100e-04

Joint ci ratio: 1.108930e-01	ci left: 4.369359e-04	ci right 4.885897e-04	k: 1248	n:2700000
Cons ci ratio: 3.137127e-02	ci left: 5.659422e-03	ci right 5.840159e-03	k: 15523	n:2700000
KS ci ratio: 8.089715e-02	ci left: 8.337325e-04	ci right 9.043821e-04	k: 2345	n:2700000
MEGF6   2700000 perm   3158 sec   (855 perm/sec)   p_kst 8.685185e-04   p_cons 5.749259e-03   p_joint 4.622222e-04

Joint ci ratio: 1.105395e-01	ci left: 4.381939e-04	ci right 4.898206e-04	k: 1256	n:2710000
Cons ci ratio: 3.130777e-02	ci left: 5.661604e-03	ci right 5.842038e-03	k: 15586	n:2710000
KS ci ratio: 8.077675e-02	ci left: 8.331868e-04	ci right 9.036801e-04	k: 2352	n:2710000
MEGF6   2710000 perm   3178 sec   (853 perm/sec)   p_kst 8.678967e-04   p_cons 5.751292e-03   p_joint 4.634686e-04

Joint ci ratio: 1.103641e-01	ci left: 4.380128e-04	ci right 4.895309e-04	k: 1260	n:2720000
Cons ci ratio: 3.125270e-02	ci left: 5.660852e-03	ci right 5.840938e-03	k: 15641	n:2720000
KS ci ratio: 8.062271e-02	ci left: 8.333657e-04	ci right 9.037333e-04	k: 2361	n:2720000
MEGF6   2720000 perm   3199 sec   (850 perm/sec)   p_kst 8.680147e-04   p_cons 5.750368e-03   p_joint 4.632353e-04

Joint ci ratio: 1.102331e-01	ci left: 4.374770e-04	ci right 4.888670e-04	k: 1263	n:2730000
Cons ci ratio: 3.119991e-02	ci left: 5.659378e-03	ci right 5.839108e-03	k: 15694	n:2730000
KS ci ratio: 8.046954e-02	ci left: 8.335434e-04	ci right 9.037861e-04	k: 2370	n:2730000
MEGF6   2730000 perm   3219 sec   (848 perm/sec)   p_kst 8.681319e-04   p_cons 5.748718e-03   p_joint 4.626374e-04

Joint ci ratio: 1.099723e-01	ci left: 4.380098e-04	ci right 4.893329e-04	k: 1269	n:2740000
Cons ci ratio: 3.114540e-02	ci left: 5.658640e-03	ci right 5.838027e-03	k: 15749	n:2740000
KS ci ratio: 8.035104e-02	ci left: 8.330046e-04	ci right 9.030937e-04	k: 2377	n:2740000
MEGF6   2740000 perm   3240 sec   (846 perm/sec)   p_kst 8.675182e-04   p_cons 5.747810e-03   p_joint 4.631387e-04

Joint ci ratio: 1.097565e-01	ci left: 4.381853e-04	ci right 4.894216e-04	k: 1274	n:2750000
Cons ci ratio: 3.107536e-02	ci left: 5.663681e-03	ci right 5.842817e-03	k: 15820	n:2750000
KS ci ratio: 8.021624e-02	ci left: 8.328262e-04	ci right 9.027772e-04	k: 2385	n:2750000
MEGF6   2750000 perm   3260 sec   (844 perm/sec)   p_kst 8.672727e-04   p_cons 5.752727e-03   p_joint 4.632727e-04

Joint ci ratio: 1.095847e-01	ci left: 4.380072e-04	ci right 4.891373e-04	k: 1278	n:2760000
Cons ci ratio: 3.101953e-02	ci left: 5.663652e-03	ci right 5.842460e-03	k: 15877	n:2760000
KS ci ratio: 8.011561e-02	ci left: 8.319390e-04	ci right 9.017238e-04	k: 2391	n:2760000
MEGF6   2760000 perm   3281 sec   (841 perm/sec)   p_kst 8.663043e-04   p_cons 5.752536e-03   p_joint 4.630435e-04

Joint ci ratio: 1.094565e-01	ci left: 4.374793e-04	ci right 4.884842e-04	k: 1281	n:2770000
Cons ci ratio: 3.096401e-02	ci left: 5.663624e-03	ci right 5.842105e-03	k: 15934	n:2770000
KS ci ratio: 7.991535e-02	ci left: 8.331811e-04	ci right 9.028872e-04	k: 2403	n:2770000
MEGF6   2770000 perm   3302 sec   (839 perm/sec)   p_kst 8.675090e-04   p_cons 5.752347e-03   p_joint 4.624549e-04

Joint ci ratio: 1.092861e-01	ci left: 4.373051e-04	ci right 4.882053e-04	k: 1285	n:2780000
Cons ci ratio: 3.091461e-02	ci left: 5.661455e-03	ci right 5.839577e-03	k: 15985	n:2780000
KS ci ratio: 7.970009e-02	ci left: 8.347670e-04	ci right 9.044089e-04	k: 2416	n:2780000
MEGF6   2780000 perm   3323 sec   (837 perm/sec)   p_kst 8.690647e-04   p_cons 5.750000e-03   p_joint 4.622302e-04

Joint ci ratio: 1.090743e-01	ci left: 4.374809e-04	ci right 4.882965e-04	k: 1290	n:2790000
Cons ci ratio: 3.085481e-02	ci left: 5.663213e-03	ci right 5.841041e-03	k: 16047	n:2790000
KS ci ratio: 7.956852e-02	ci left: 8.345853e-04	ci right 9.040918e-04	k: 2424	n:2790000
MEGF6   2790000 perm   3344 sec   (834 perm/sec)   p_kst 8.688172e-04   p_cons 5.751613e-03   p_joint 4.623656e-04

Joint ci ratio: 1.087797e-01	ci left: 4.383504e-04	ci right 4.891206e-04	k: 1297	n:2800000
Cons ci ratio: 3.079055e-02	ci left: 5.666732e-03	ci right 5.844293e-03	k: 16114	n:2800000
KS ci ratio: 7.935604e-02	ci left: 8.361553e-04	ci right 9.055980e-04	k: 2437	n:2800000
MEGF6   2800000 perm   3365 sec   (832 perm/sec)   p_kst 8.703571e-04   p_cons 5.755000e-03   p_joint 4.632143e-04

Joint ci ratio: 1.085708e-01	ci left: 4.385214e-04	ci right 4.892077e-04	k: 1302	n:2810000
Cons ci ratio: 3.073911e-02	ci left: 5.665635e-03	ci right 5.842859e-03	k: 16168	n:2810000
KS ci ratio: 7.925861e-02	ci left: 8.352725e-04	ci right 9.045528e-04	k: 2443	n:2810000
MEGF6   2810000 perm   3386 sec   (830 perm/sec)   p_kst 8.693950e-04   p_cons 5.753737e-03   p_joint 4.633452e-04

Joint ci ratio: 1.084461e-01	ci left: 4.380013e-04	ci right 4.885656e-04	k: 1305	n:2820000
Cons ci ratio: 3.067842e-02	ci left: 5.668065e-03	ci right 5.845009e-03	k: 16232	n:2820000
KS ci ratio: 7.921009e-02	ci left: 8.333532e-04	ci right 9.024301e-04	k: 2446	n:2820000
MEGF6   2820000 perm   3407 sec   (828 perm/sec)   p_kst 8.673759e-04   p_cons 5.756028e-03   p_joint 4.627660e-04

Joint ci ratio: 1.081978e-01	ci left: 4.385163e-04	ci right 4.890168e-04	k: 1311	n:2830000
Cons ci ratio: 3.063511e-02	ci left: 5.664166e-03	ci right 5.840735e-03	k: 16278	n:2830000
KS ci ratio: 7.908093e-02	ci left: 8.331794e-04	ci right 9.021241e-04	k: 2454	n:2830000
MEGF6   2830000 perm   3429 sec   (825 perm/sec)   p_kst 8.671378e-04   p_cons 5.751943e-03   p_joint 4.632509e-04

Joint ci ratio: 1.080743e-01	ci left: 4.380000e-04	ci right 4.883798e-04	k: 1314	n:2840000
Cons ci ratio: 3.058444e-02	ci left: 5.663090e-03	ci right 5.839328e-03	k: 16332	n:2840000
KS ci ratio: 7.890433e-02	ci left: 8.340425e-04	ci right 9.028973e-04	k: 2465	n:2840000
MEGF6   2840000 perm   3450 sec   (823 perm/sec)   p_kst 8.679577e-04   p_cons 5.750704e-03   p_joint 4.626761e-04

Joint ci ratio: 1.079923e-01	ci left: 4.371459e-04	ci right 4.873869e-04	k: 1316	n:2850000
Cons ci ratio: 3.054903e-02	ci left: 5.656451e-03	ci right 5.832275e-03	k: 16370	n:2850000
KS ci ratio: 7.879260e-02	ci left: 8.335237e-04	ci right 9.022338e-04	k: 2472	n:2850000
MEGF6   2850000 perm   3472 sec   (821 perm/sec)   p_kst 8.673684e-04   p_cons 5.743860e-03   p_joint 4.617544e-04

Joint ci ratio: 1.077471e-01	ci left: 4.376588e-04	ci right 4.878372e-04	k: 1322	n:2860000
Cons ci ratio: 3.048200e-02	ci left: 5.661656e-03	ci right 5.837249e-03	k: 16442	n:2860000
KS ci ratio: 7.868134e-02	ci left: 8.330086e-04	ci right 9.015749e-04	k: 2479	n:2860000
MEGF6   2860000 perm   3494 sec   (819 perm/sec)   p_kst 8.667832e-04   p_cons 5.748951e-03   p_joint 4.622378e-04

Joint ci ratio: 1.075441e-01	ci left: 4.378291e-04	ci right 4.879265e-04	k: 1327	n:2870000
Cons ci ratio: 3.043209e-02	ci left: 5.660601e-03	ci right 5.835869e-03	k: 16496	n:2870000
KS ci ratio: 7.846012e-02	ci left: 8.348884e-04	ci right 9.034074e-04	k: 2493	n:2870000
MEGF6   2870000 perm   3515 sec   (816 perm/sec)   p_kst 8.686411e-04   p_cons 5.747735e-03   p_joint 4.623693e-04

Joint ci ratio: 1.073019e-01	ci left: 4.383362e-04	ci right 4.883716e-04	k: 1333	n:2880000
Cons ci ratio: 3.037780e-02	ci left: 5.661277e-03	ci right 5.836247e-03	k: 16555	n:2880000
KS ci ratio: 7.839734e-02	ci left: 8.333511e-04	ci right 9.016867e-04	k: 2497	n:2880000
MEGF6   2880000 perm   3536 sec   (814 perm/sec)   p_kst 8.670139e-04   p_cons 5.748264e-03   p_joint 4.628472e-04

Joint ci ratio: 1.071414e-01	ci left: 4.381664e-04	ci right 4.881029e-04	k: 1337	n:2890000
Cons ci ratio: 3.033759e-02	ci left: 5.656797e-03	ci right 5.831393e-03	k: 16599	n:2890000
KS ci ratio: 7.822527e-02	ci left: 8.341992e-04	ci right 9.024474e-04	k: 2508	n:2890000
MEGF6   2890000 perm   3558 sec   (812 perm/sec)   p_kst 8.678201e-04   p_cons 5.743599e-03   p_joint 4.626298e-04

Joint ci ratio: 1.069418e-01	ci left: 4.383335e-04	ci right 4.881900e-04	k: 1342	n:2900000
Cons ci ratio: 3.027376e-02	ci left: 5.661246e-03	ci right 5.835606e-03	k: 16669	n:2900000
KS ci ratio: 7.808534e-02	ci left: 8.343655e-04	ci right 9.024996e-04	k: 2517	n:2900000
MEGF6   2900000 perm   3580 sec   (810 perm/sec)   p_kst 8.679310e-04   p_cons 5.747931e-03   p_joint 4.627586e-04

Joint ci ratio: 1.067829e-01	ci left: 4.381650e-04	ci right 4.879237e-04	k: 1346	n:2910000
Cons ci ratio: 3.023214e-02	ci left: 5.657479e-03	ci right 5.831479e-03	k: 16715	n:2910000
KS ci ratio: 7.799251e-02	ci left: 8.335199e-04	ci right 9.015003e-04	k: 2523	n:2910000
MEGF6   2910000 perm   3606 sec   (807 perm/sec)   p_kst 8.670103e-04   p_cons 5.743986e-03   p_joint 4.625430e-04

Joint ci ratio: 1.066247e-01	ci left: 4.379978e-04	ci right 4.876592e-04	k: 1350	n:2920000
Cons ci ratio: 3.017982e-02	ci left: 5.657817e-03	ci right 5.831521e-03	k: 16773	n:2920000
KS ci ratio: 7.785382e-02	ci left: 8.336875e-04	ci right 9.015552e-04	k: 2532	n:2920000
MEGF6   2920000 perm   3628 sec   (805 perm/sec)   p_kst 8.671233e-04   p_cons 5.744178e-03   p_joint 4.623288e-04

Joint ci ratio: 1.065065e-01	ci left: 4.374995e-04	ci right 4.870460e-04	k: 1353	n:2930000
Cons ci ratio: 3.012508e-02	ci left: 5.659169e-03	ci right 5.832595e-03	k: 16834	n:2930000
KS ci ratio: 7.774649e-02	ci left: 8.331847e-04	ci right 9.009138e-04	k: 2539	n:2930000
MEGF6   2930000 perm   3650 sec   (803 perm/sec)   p_kst 8.665529e-04   p_cons 5.745392e-03   p_joint 4.617747e-04

Joint ci ratio: 1.063104e-01	ci left: 4.376668e-04	ci right 4.871353e-04	k: 1358	n:2940000
Cons ci ratio: 3.007600e-02	ci left: 5.658487e-03	ci right 5.831604e-03	k: 16889	n:2940000
KS ci ratio: 7.756344e-02	ci left: 8.343532e-04	ci right 9.020103e-04	k: 2551	n:2940000
MEGF6   2940000 perm   3680 sec   (799 perm/sec)   p_kst 8.676871e-04   p_cons 5.744558e-03   p_joint 4.619048e-04

Joint ci ratio: 1.060765e-01	ci left: 4.381631e-04	ci right 4.875719e-04	k: 1364	n:2950000
Cons ci ratio: 3.002093e-02	ci left: 5.660165e-03	ci right 5.833011e-03	k: 16951	n:2950000
KS ci ratio: 7.745731e-02	ci left: 8.338517e-04	ci right 9.013715e-04	k: 2558	n:2950000
MEGF6   2950000 perm   3703 sec   (797 perm/sec)   p_kst 8.671186e-04   p_cons 5.746102e-03   p_joint 4.623729e-04

Joint ci ratio: 1.059989e-01	ci left: 4.373405e-04	ci right 4.866183e-04	k: 1366	n:2960000
Cons ci ratio: 2.997058e-02	ci left: 5.660155e-03	ci right 5.832706e-03	k: 17008	n:2960000
KS ci ratio: 7.729134e-02	ci left: 8.346790e-04	ci right 9.021144e-04	k: 2569	n:2960000
MEGF6   2960000 perm   3725 sec   (795 perm/sec)   p_kst 8.679054e-04   p_cons 5.745946e-03   p_joint 4.614865e-04

Joint ci ratio: 1.056516e-01	ci left: 4.388181e-04	ci right 4.880903e-04	k: 1375	n:2970000
Cons ci ratio: 2.991080e-02	ci left: 5.663822e-03	ci right 5.836134e-03	k: 17076	n:2970000
KS ci ratio: 7.714138e-02	ci left: 8.351706e-04	ci right 9.025090e-04	k: 2579	n:2970000
MEGF6   2970000 perm   3747 sec   (793 perm/sec)   p_kst 8.683502e-04   p_cons 5.749495e-03   p_joint 4.629630e-04

Joint ci ratio: 1.055367e-01	ci left: 4.383257e-04	ci right 4.874857e-04	k: 1378	n:2980000
Cons ci ratio: 2.987241e-02	ci left: 5.659470e-03	ci right 5.831425e-03	k: 17120	n:2980000
KS ci ratio: 7.694771e-02	ci left: 8.366464e-04	ci right 9.039269e-04	k: 2592	n:2980000
MEGF6   2980000 perm   3771 sec   (790 perm/sec)   p_kst 8.697987e-04   p_cons 5.744966e-03   p_joint 4.624161e-04

Joint ci ratio: 1.053839e-01	ci left: 4.381622e-04	ci right 4.872284e-04	k: 1382	n:2990000
Cons ci ratio: 2.983329e-02	ci left: 5.655480e-03	ci right 5.827085e-03	k: 17165	n:2990000
KS ci ratio: 7.677023e-02	ci left: 8.377845e-04	ci right 9.049942e-04	k: 2604	n:2990000
MEGF6   2990000 perm   3793 sec   (788 perm/sec)   p_kst 8.709030e-04   p_cons 5.740803e-03   p_joint 4.622074e-04

Joint ci ratio: 1.053079e-01	ci left: 4.373508e-04	ci right 4.862885e-04	k: 1384	n:3000000
Cons ci ratio: 2.977954e-02	ci left: 5.657141e-03	ci right 5.828482e-03	k: 17227	n:3000000
KS ci ratio: 7.666732e-02	ci left: 8.372805e-04	ci right 9.043556e-04	k: 2611	n:3000000
MEGF6   3000000 perm   3815 sec   (786 perm/sec)   p_kst 8.703333e-04   p_cons 5.742333e-03   p_joint 4.613333e-04

Joint ci ratio: 1.052699e-01	ci left: 4.362213e-04	ci right 4.850139e-04	k: 1385	n:3010000
Cons ci ratio: 2.971830e-02	ci left: 5.661759e-03	ci right 5.832881e-03	k: 17298	n:3010000
KS ci ratio: 7.655019e-02	ci left: 8.371057e-04	ci right 9.040598e-04	k: 2619	n:3010000
MEGF6   3010000 perm   3838 sec   (784 perm/sec)   p_kst 8.700997e-04   p_cons 5.746844e-03   p_joint 4.601329e-04

Joint ci ratio: 1.051184e-01	ci left: 4.360665e-04	ci right 4.847672e-04	k: 1389	n:3020000
Cons ci ratio: 2.966516e-02	ci left: 5.663389e-03	ci right 5.834249e-03	k: 17360	n:3020000
KS ci ratio: 7.647729e-02	ci left: 8.359578e-04	ci right 9.027536e-04	k: 2624	n:3020000
MEGF6   3020000 perm   3860 sec   (782 perm/sec)   p_kst 8.688742e-04   p_cons 5.748344e-03   p_joint 4.599338e-04

Joint ci ratio: 1.050051e-01	ci left: 4.355914e-04	ci right 4.841835e-04	k: 1392	n:3030000
Cons ci ratio: 2.962343e-02	ci left: 5.660750e-03	ci right 5.831286e-03	k: 17409	n:3030000
KS ci ratio: 7.631753e-02	ci left: 8.367599e-04	ci right 9.034739e-04	k: 2635	n:3030000
MEGF6   3030000 perm   3883 sec   (780 perm/sec)   p_kst 8.696370e-04   p_cons 5.745545e-03   p_joint 4.594059e-04

Joint ci ratio: 1.049299e-01	ci left: 4.347991e-04	ci right 4.832659e-04	k: 1394	n:3040000
Cons ci ratio: 2.957080e-02	ci left: 5.662373e-03	ci right 5.832650e-03	k: 17471	n:3040000
KS ci ratio: 7.617316e-02	ci left: 8.372341e-04	ci right 9.038541e-04	k: 2645	n:3040000
MEGF6   3040000 perm   3906 sec   (778 perm/sec)   p_kst 8.700658e-04   p_cons 5.747039e-03   p_joint 4.585526e-04

Joint ci ratio: 1.047423e-01	ci left: 4.349699e-04	ci right 4.833638e-04	k: 1399	n:3050000
Cons ci ratio: 2.953031e-02	ci left: 5.659429e-03	ci right 5.829380e-03	k: 17519	n:3050000
KS ci ratio: 7.605828e-02	ci left: 8.370621e-04	ci right 9.035635e-04	k: 2653	n:3050000
MEGF6   3050000 perm   3929 sec   (776 perm/sec)   p_kst 8.698361e-04   p_cons 5.743934e-03   p_joint 4.586885e-04

Joint ci ratio: 1.045930e-01	ci left: 4.348214e-04	ci right 4.831255e-04	k: 1403	n:3060000
Cons ci ratio: 2.947986e-02	ci left: 5.660397e-03	ci right 5.830082e-03	k: 17579	n:3060000
KS ci ratio: 7.594392e-02	ci left: 8.368913e-04	ci right 9.032748e-04	k: 2661	n:3060000
MEGF6   3060000 perm   3952 sec   (774 perm/sec)   p_kst 8.696078e-04   p_cons 5.744771e-03   p_joint 4.584967e-04

Joint ci ratio: 1.043702e-01	ci left: 4.353084e-04	ci right 4.835573e-04	k: 1409	n:3070000
Cons ci ratio: 2.943471e-02	ci left: 5.659420e-03	ci right 5.828811e-03	k: 17633	n:3070000
KS ci ratio: 7.584428e-02	ci left: 8.364021e-04	ci right 9.026559e-04	k: 2668	n:3070000
MEGF6   3070000 perm   3974 sec   (772 perm/sec)   p_kst 8.690554e-04   p_cons 5.743648e-03   p_joint 4.589577e-04

Joint ci ratio: 1.042963e-01	ci left: 4.345275e-04	ci right 4.826536e-04	k: 1411	n:3080000
Cons ci ratio: 2.938725e-02	ci left: 5.659415e-03	ci right 5.828529e-03	k: 17690	n:3080000
KS ci ratio: 7.573088e-02	ci left: 8.362347e-04	ci right 9.023718e-04	k: 2676	n:3080000
MEGF6   3080000 perm   3997 sec   (771 perm/sec)   p_kst 8.688312e-04   p_cons 5.743506e-03   p_joint 4.581169e-04

Joint ci ratio: 1.041122e-01	ci left: 4.346972e-04	ci right 4.827519e-04	k: 1416	n:3090000
Cons ci ratio: 2.934002e-02	ci left: 5.659411e-03	ci right 5.828248e-03	k: 17747	n:3090000
KS ci ratio: 7.561798e-02	ci left: 8.360685e-04	ci right 9.020895e-04	k: 2684	n:3090000
MEGF6   3090000 perm   4020 sec   (769 perm/sec)   p_kst 8.686084e-04   p_cons 5.743366e-03   p_joint 4.582524e-04

Joint ci ratio: 1.039655e-01	ci left: 4.345517e-04	ci right 4.825185e-04	k: 1420	n:3100000
Cons ci ratio: 2.929220e-02	ci left: 5.659728e-03	ci right 5.828294e-03	k: 17805	n:3100000
KS ci ratio: 7.551962e-02	ci left: 8.355869e-04	ci right 9.014803e-04	k: 2691	n:3100000
MEGF6   3100000 perm   4043 sec   (767 perm/sec)   p_kst 8.680645e-04   p_cons 5.743548e-03   p_joint 4.580645e-04

Joint ci ratio: 1.038925e-01	ci left: 4.337808e-04	ci right 4.816268e-04	k: 1422	n:3110000
Cons ci ratio: 2.924790e-02	ci left: 5.658765e-03	ci right 5.827044e-03	k: 17859	n:3110000
KS ci ratio: 7.539370e-02	ci left: 8.357394e-04	ci right 9.015301e-04	k: 2700	n:3110000
MEGF6   3110000 perm   4066 sec   (765 perm/sec)   p_kst 8.681672e-04   p_cons 5.742444e-03   p_joint 4.572347e-04

Joint ci ratio: 1.037832e-01	ci left: 4.333270e-04	ci right 4.810696e-04	k: 1425	n:3120000
Cons ci ratio: 2.920298e-02	ci left: 5.658128e-03	ci right 5.826125e-03	k: 17914	n:3120000
KS ci ratio: 7.526840e-02	ci left: 8.358910e-04	ci right 9.015795e-04	k: 2709	n:3120000
MEGF6   3120000 perm   4089 sec   (763 perm/sec)   p_kst 8.682692e-04   p_cons 5.741667e-03   p_joint 4.567308e-04

Joint ci ratio: 1.035293e-01	ci left: 4.341210e-04	ci right 4.818270e-04	k: 1432	n:3130000
Cons ci ratio: 2.915174e-02	ci left: 5.660032e-03	ci right 5.827786e-03	k: 17977	n:3130000
KS ci ratio: 7.511607e-02	ci left: 8.366687e-04	ci right 9.022795e-04	k: 2720	n:3130000
MEGF6   3130000 perm   4112 sec   (761 perm/sec)   p_kst 8.690096e-04   p_cons 5.743450e-03   p_joint 4.575080e-04

Joint ci ratio: 1.033492e-01	ci left: 4.342896e-04	ci right 4.819261e-04	k: 1437	n:3140000
Cons ci ratio: 2.909996e-02	ci left: 5.662240e-03	ci right 5.829756e-03	k: 18041	n:3140000
KS ci ratio: 7.503342e-02	ci left: 8.358791e-04	ci right 9.013527e-04	k: 2726	n:3140000
MEGF6   3140000 perm   4135 sec   (759 perm/sec)   p_kst 8.681529e-04   p_cons 5.745541e-03   p_joint 4.576433e-04

Joint ci ratio: 1.032774e-01	ci left: 4.335294e-04	ci right 4.810475e-04	k: 1439	n:3150000
Cons ci ratio: 2.905410e-02	ci left: 5.662228e-03	ci right 5.829476e-03	k: 18098	n:3150000
KS ci ratio: 7.489621e-02	ci left: 8.363407e-04	ci right 9.017254e-04	k: 2736	n:3150000
MEGF6   3150000 perm   4158 sec   (758 perm/sec)   p_kst 8.685714e-04   p_cons 5.745397e-03   p_joint 4.568254e-04

Joint ci ratio: 1.031343e-01	ci left: 4.333907e-04	ci right 4.808237e-04	k: 1443	n:3160000
Cons ci ratio: 2.901650e-02	ci left: 5.659075e-03	ci right 5.826010e-03	k: 18145	n:3160000
KS ci ratio: 7.475975e-02	ci left: 8.367994e-04	ci right 9.020955e-04	k: 2746	n:3160000
MEGF6   3160000 perm   4182 sec   (756 perm/sec)   p_kst 8.689873e-04   p_cons 5.742089e-03   p_joint 4.566456e-04

Joint ci ratio: 1.029207e-01	ci left: 4.338675e-04	ci right 4.812484e-04	k: 1449	n:3170000
Cons ci ratio: 2.897904e-02	ci left: 5.655942e-03	ci right 5.822565e-03	k: 18192	n:3170000
KS ci ratio: 7.459695e-02	ci left: 8.378744e-04	ci right 9.031060e-04	k: 2758	n:3170000
MEGF6   3170000 perm   4205 sec   (754 perm/sec)   p_kst 8.700315e-04   p_cons 5.738801e-03   p_joint 4.570978e-04

Joint ci ratio: 1.026731e-01	ci left: 4.346478e-04	ci right 4.819928e-04	k: 1456	n:3180000
Cons ci ratio: 2.893056e-02	ci left: 5.657200e-03	ci right 5.823577e-03	k: 18253	n:3180000
KS ci ratio: 7.442177e-02	ci left: 8.392515e-04	ci right 9.044302e-04	k: 2771	n:3180000
MEGF6   3180000 perm   4229 sec   (752 perm/sec)   p_kst 8.713836e-04   p_cons 5.739937e-03   p_joint 4.578616e-04

Joint ci ratio: 1.026028e-01	ci left: 4.338961e-04	ci right 4.811250e-04	k: 1458	n:3190000
Cons ci ratio: 2.888233e-02	ci left: 5.658450e-03	ci right 5.824581e-03	k: 18314	n:3190000
KS ci ratio: 7.431462e-02	ci left: 8.390818e-04	ci right 9.041494e-04	k: 2779	n:3190000
MEGF6   3190000 perm   4252 sec   (750 perm/sec)   p_kst 8.711599e-04   p_cons 5.741066e-03   p_joint 4.570533e-04

Joint ci ratio: 1.023575e-01	ci left: 4.346716e-04	ci right 4.818650e-04	k: 1465	n:3200000
Cons ci ratio: 2.884144e-02	ci left: 5.656900e-03	ci right 5.822747e-03	k: 18366	n:3200000
KS ci ratio: 7.422126e-02	ci left: 8.386066e-04	ci right 9.035521e-04	k: 2786	n:3200000
MEGF6   3200000 perm   4276 sec   (748 perm/sec)   p_kst 8.706250e-04   p_cons 5.739375e-03   p_joint 4.578125e-04

Joint ci ratio: 1.021486e-01	ci left: 4.351389e-04	ci right 4.822808e-04	k: 1471	n:3210000
Cons ci ratio: 2.879129e-02	ci left: 5.659071e-03	ci right 5.824689e-03	k: 18430	n:3210000
KS ci ratio: 7.410170e-02	ci left: 8.387458e-04	ci right 9.035930e-04	k: 2795	n:3210000
MEGF6   3210000 perm   4300 sec   (747 perm/sec)   p_kst 8.707165e-04   p_cons 5.741433e-03   p_joint 4.582555e-04

Joint ci ratio: 1.020793e-01	ci left: 4.343928e-04	ci right 4.814200e-04	k: 1473	n:3220000
Cons ci ratio: 2.874453e-02	ci left: 5.659996e-03	ci right 5.825367e-03	k: 18490	n:3220000
KS ci ratio: 7.406205e-02	ci left: 8.370554e-04	ci right 9.017358e-04	k: 2798	n:3220000
MEGF6   3220000 perm   4324 sec   (745 perm/sec)   p_kst 8.689441e-04   p_cons 5.742236e-03   p_joint 4.574534e-04

Joint ci ratio: 1.018378e-01	ci left: 4.351598e-04	ci right 4.821519e-04	k: 1480	n:3230000
Cons ci ratio: 2.870344e-02	ci left: 5.658763e-03	ci right 5.823858e-03	k: 18543	n:3230000
KS ci ratio: 7.395644e-02	ci left: 8.368949e-04	ci right 9.014667e-04	k: 2806	n:3230000
MEGF6   3230000 perm   4348 sec   (743 perm/sec)   p_kst 8.687307e-04   p_cons 5.740867e-03   p_joint 4.582043e-04

Joint ci ratio: 1.018378e-01	ci left: 4.338167e-04	ci right 4.806638e-04	k: 1480	n:3240000
Cons ci ratio: 2.865788e-02	ci left: 5.659377e-03	ci right 5.824224e-03	k: 18602	n:3240000
KS ci ratio: 7.381193e-02	ci left: 8.376442e-04	ci right 9.021421e-04	k: 2817	n:3240000
MEGF6   3240000 perm   4372 sec   (741 perm/sec)   p_kst 8.694444e-04   p_cons 5.741358e-03   p_joint 4.567901e-04

Joint ci ratio: 1.017006e-01	ci left: 4.336813e-04	ci right 4.804470e-04	k: 1484	n:3250000
Cons ci ratio: 2.861563e-02	ci left: 5.658766e-03	ci right 5.823348e-03	k: 18657	n:3250000
KS ci ratio: 7.372044e-02	ci left: 8.371809e-04	ci right 9.015599e-04	k: 2824	n:3250000
MEGF6   3250000 perm   4396 sec   (739 perm/sec)   p_kst 8.689231e-04   p_cons 5.740615e-03   p_joint 4.566154e-04

Joint ci ratio: 1.015639e-01	ci left: 4.335468e-04	ci right 4.802314e-04	k: 1488	n:3260000
Cons ci ratio: 2.855897e-02	ci left: 5.663945e-03	ci right 5.828346e-03	k: 18731	n:3260000
KS ci ratio: 7.360329e-02	ci left: 8.373228e-04	ci right 9.016059e-04	k: 2833	n:3260000
MEGF6   3260000 perm   4420 sec   (738 perm/sec)   p_kst 8.690184e-04   p_cons 5.745706e-03   p_joint 4.564417e-04

Joint ci ratio: 1.013938e-01	ci left: 4.337113e-04	ci right 4.803306e-04	k: 1493	n:3270000
Cons ci ratio: 2.851639e-02	ci left: 5.663627e-03	ci right 5.827770e-03	k: 18787	n:3270000
KS ci ratio: 7.342210e-02	ci left: 8.389648e-04	ci right 9.032087e-04	k: 2847	n:3270000
MEGF6   3270000 perm   4444 sec   (736 perm/sec)   p_kst 8.706422e-04   p_cons 5.745260e-03   p_joint 4.565749e-04

Joint ci ratio: 1.013600e-01	ci left: 4.326861e-04	ci right 4.791788e-04	k: 1494	n:3280000
Cons ci ratio: 2.847551e-02	ci left: 5.662706e-03	ci right 5.826583e-03	k: 18841	n:3280000
KS ci ratio: 7.326787e-02	ci left: 8.399985e-04	ci right 9.041806e-04	k: 2859	n:3280000
MEGF6   3280000 perm   4467 sec   (734 perm/sec)   p_kst 8.716463e-04   p_cons 5.744207e-03   p_joint 4.554878e-04

Joint ci ratio: 1.011909e-01	ci left: 4.328522e-04	ci right 4.792806e-04	k: 1499	n:3290000
Cons ci ratio: 2.841364e-02	ci left: 5.670241e-03	ci right 5.833974e-03	k: 18923	n:3290000
KS ci ratio: 7.312735e-02	ci left: 8.407276e-04	ci right 9.048370e-04	k: 2870	n:3290000
MEGF6   3290000 perm   4492 sec   (732 perm/sec)   p_kst 8.723404e-04   p_cons 5.751672e-03   p_joint 4.556231e-04

Joint ci ratio: 1.010226e-01	ci left: 4.330174e-04	ci right 4.793817e-04	k: 1504	n:3300000
Cons ci ratio: 2.837320e-02	ci left: 5.669306e-03	ci right 5.832775e-03	k: 18977	n:3300000
KS ci ratio: 7.297496e-02	ci left: 8.417499e-04	ci right 9.057978e-04	k: 2882	n:3300000
MEGF6   3300000 perm   4516 sec   (731 perm/sec)   p_kst 8.733333e-04   p_cons 5.750606e-03   p_joint 4.557576e-04

Joint ci ratio: 1.008552e-01	ci left: 4.331816e-04	ci right 4.794821e-04	k: 1509	n:3310000
Cons ci ratio: 2.832695e-02	ci left: 5.670777e-03	ci right 5.834017e-03	k: 19039	n:3310000
KS ci ratio: 7.288655e-02	ci left: 8.412831e-04	ci right 9.052147e-04	k: 2889	n:3310000
MEGF6   3310000 perm   4540 sec   (729 perm/sec)   p_kst 8.728097e-04   p_cons 5.751964e-03   p_joint 4.558912e-04

Joint ci ratio: 1.006554e-01	ci left: 4.336385e-04	ci right 4.798906e-04	k: 1515	n:3320000
Cons ci ratio: 2.829135e-02	ci left: 5.668052e-03	ci right 5.831005e-03	k: 19087	n:3320000
KS ci ratio: 7.274821e-02	ci left: 8.420020e-04	ci right 9.058617e-04	k: 2900	n:3320000
MEGF6   3320000 perm   4565 sec   (727 perm/sec)   p_kst 8.734940e-04   p_cons 5.749096e-03   p_joint 4.563253e-04

Joint ci ratio: 1.004238e-01	ci left: 4.343856e-04	ci right 4.806044e-04	k: 1522	n:3330000
Cons ci ratio: 2.824624e-02	ci left: 5.669219e-03	ci right 5.831942e-03	k: 19148	n:3330000
KS ci ratio: 7.258571e-02	ci left: 8.433065e-04	ci right 9.071162e-04	k: 2913	n:3330000
MEGF6   3330000 perm   4589 sec   (726 perm/sec)   p_kst 8.747748e-04   p_cons 5.750150e-03   p_joint 4.570571e-04

Joint ci ratio: 1.002266e-01	ci left: 4.348364e-04	ci right 4.810069e-04	k: 1528	n:3340000
Cons ci ratio: 2.820947e-02	ci left: 5.667110e-03	ci right 5.829557e-03	k: 19198	n:3340000
KS ci ratio: 7.241191e-02	ci left: 8.448972e-04	ci right 9.086678e-04	k: 2927	n:3340000
MEGF6   3340000 perm   4614 sec   (724 perm/sec)   p_kst 8.763473e-04   p_cons 5.747904e-03   p_joint 4.574850e-04

Joint ci ratio: 1.000957e-01	ci left: 4.347025e-04	ci right 4.807950e-04	k: 1532	n:3350000
Cons ci ratio: 2.817799e-02	ci left: 5.662938e-03	ci right 5.825082e-03	k: 19241	n:3350000
KS ci ratio: 7.228856e-02	ci left: 8.453062e-04	ci right 9.089944e-04	k: 2937	n:3350000
MEGF6   3350000 perm   4639 sec   (722 perm/sec)   p_kst 8.767164e-04   p_cons 5.743582e-03   p_joint 4.573134e-04

Joint ci ratio: 9.996540e-02	ci left: 4.345694e-04	ci right 4.805843e-04	k: 1536	n:3360000
Cons ci ratio: 2.814589e-02	ci left: 5.659087e-03	ci right 5.820933e-03	k: 19285	n:3360000
KS ci ratio: 7.219035e-02	ci left: 8.451284e-04	ci right 9.087130e-04	k: 2945	n:3360000
MEGF6   3360000 perm   4663 sec   (721 perm/sec)   p_kst 8.764881e-04   p_cons 5.739583e-03   p_joint 4.571429e-04

Outputting figure to mutsig2_images.part000000000104/MEGF6.2_4774_3360000_0.00087649_0.0057396_0.00045714.png
                gene_name: MEGF6
               theta_stop: 0.100 
                    nperm: 3360000 
                     p_ks: 0.00088 
        ci_ks_bounds_left: 0.00085 
       ci_ks_bounds_right: 0.00091 
                   p_cons: 0.0057 
      ci_cons_bounds_left: 0.0057 
     ci_cons_bounds_right: 0.0058 
                  p_joint: 0.00046 
     ci_joint_bounds_left: 0.00043 
    ci_joint_bounds_right: 0.00048 

Current progress: 67 percent done.
MEPCE
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.706549e-02	ci left: 8.333784e-01	ci right 8.478226e-01	k: 8407	n:10000
Cons ci ratio: 1.157215e-02	ci left: 9.144065e-01	ci right 9.251474e-01	k: 9199	n:10000
KS ci ratio: 5.565406e-02	ci left: 3.222736e-01	ci right 3.408246e-01	k: 3315	n:10000
MEPCE   10000 perm   2 sec   (6523 perm/sec)   p_kst 3.315000e-01   p_cons 9.199000e-01   p_joint 8.407000e-01

Outputting figure to mutsig2_images.part000000000104/MEPCE.2_2086_10000_0.3315_0.9199_0.8407.png
                gene_name: MEPCE
               theta_stop: 0.056 
                    nperm: 10000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.93 
                  p_joint: 0.84 
     ci_joint_bounds_left: 0.83 
    ci_joint_bounds_right: 0.85 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000104
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 104 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1646>
Subject: Job 8704271: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1646>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000105> was used as the working directory.
Started at Thu Nov 15 19:34:42 2012
Results reported at Thu Nov 15 19:37:44 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000105.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000105.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 105  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000105.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    177.75 sec.
    Max Memory :      5637 MB
    Max Swap   :      8359 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
105
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 105
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 105: processing genes 9409 - 9499
Calculating significance of each gene.
Using projection method.
9409	MEX3C	1
9410	MEX3D	1
9411	MFAP1	1
9412	MFAP2	1
9413	MFAP3	1
9414	MFAP3L	1
9415	MFAP4	1
9416	MFAP5	1
9417	MFF	1
9418	MFGE8	1
9419	MFHAS1	1
9420	MFI2	1
9421	MFN1	1
9422	MFN2	1
9423	MFNG	1
9424	MFRP	1
9425	MFSD1	1
9426	MFSD10	1
9427	MFSD11	1
9428	MFSD2A	1
9429	MFSD2B	1
9430	MFSD3	1
9431	MFSD4	1
9432	MFSD5	1
9433	MFSD6	1.574520e-01
9434	MFSD6L	6.466561e-02
9435	MFSD7	1.529048e-01
9436	MFSD8	1
9437	MFSD9	1
9438	MGA	1
9439	MGAM	2.374155e-01
9440	MGAT1	1
9441	MGAT2	1.031947e-01
9442	MGAT3	1
9443	MGAT4A	1
9444	MGAT4B	1
9445	MGAT4C	1
9446	MGAT5	1
9447	MGAT5B	4.980393e-02
9448	MGC26647	1
9449	MGC29506	1
9450	MGC42105	1
9451	MGC87042	1
9452	MGEA5	1
9453	MGLL	1
9454	MGMT	1
9455	MGP	1
9456	MGRN1	1
9457	MGST1	1
9458	MGST2	1
9459	MGST3	1
In gene MIA the following bins exceed PROBCAP:
    THCA-BJ-A18Y-TP	categ 6	N = 412     n = 1	mu =   1.74e-07
9460	MIA	4.081977e-02
9461	MIA2	8.463587e-02
9462	MIA3	4.179806e-01
9463	MIB1	1.834943e-01
9464	MIB2	1
9465	MICA	1
9466	MICAL1	1.366687e-01
9467	MICAL2	1
9468	MICAL3	1
9469	MICALCL	1
9470	MICALL1	1
9471	MICALL2	1
9472	MICB	1
9473	MID1	1
9474	MID1IP1	1
9475	MID2	2.419688e-02
9476	MIDN	1
9477	MIER1	1
9478	MIER2	1
9479	MIER3	1
9480	MIF	1
9481	MIF4GD	1
9482	MIIP	1
9483	MINA	1
9484	MINK1	1
9485	MINPP1	1
9486	MIOS	1
9487	MIOX	1
9488	MIP	1
9489	MIPEP	1
9490	MIPOL1	1
9491	MIS12	1
9492	MITD1	1
9493	MITF	1.247332e-01
9494	MIXL1	1
In gene MKI67 the following bins exceed PROBCAP:
    THCA-BJ-A28S-TP	categ 6	N = 9780    n = 1	mu =   2.86e-07
    THCA-DJ-A2PZ-TP	categ 6	N = 9827    n = 1	mu =   1.02e-07
9495	MKI67	1.881561e-01
9496	MKI67IP	1
9497	MKKS	1
9498	MKL1	2.089392e-01
9499	MKL2	2.659712e-01
Done

Running MutSig 2:
Scatter job 105: processing genes 9409 - 9499
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MKI67
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.355230e-01	ci left: 7.194552e-02	ci right 8.250234e-02	k: 771	n:10000
Cons ci ratio: 9.059204e-02	ci left: 1.505090e-01	ci right 1.648910e-01	k: 1576	n:10000
KS ci ratio: 1.270626e-01	ci left: 8.135280e-02	ci right 9.248921e-02	k: 868	n:10000
MKI67   10000 perm   3 sec   (3119 perm/sec)   p_kst 8.680000e-02   p_cons 1.576000e-01   p_joint 7.710000e-02

Joint ci ratio: 7.607298e-02	ci left: 1.127238e-01	ci right 1.216878e-01	k: 2343	n:20000
Cons ci ratio: 6.636013e-02	ci left: 1.435981e-01	ci right 1.535043e-01	k: 2970	n:20000
KS ci ratio: 9.001893e-02	ci left: 8.268849e-02	ci right 9.053218e-02	k: 1731	n:20000
MKI67   20000 perm   9 sec   (2183 perm/sec)   p_kst 8.655000e-02   p_cons 1.485000e-01   p_joint 1.171500e-01

Outputting figure to mutsig2_images.part000000000105/MKI67.3_9827_20000_0.08655_0.1485_0.11715.png
                gene_name: MKI67
               theta_stop: 0.090 
                    nperm: 20000 
                     p_ks: 0.087 
        ci_ks_bounds_left: 0.083 
       ci_ks_bounds_right: 0.091 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.15 
                  p_joint: 0.12 
     ci_joint_bounds_left: 0.11 
    ci_joint_bounds_right: 0.12 

Current progress: 33 percent done.
MGAT5B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.146865e-01	ci left: 9.857012e-02	ci right 1.106613e-01	k: 1045	n:10000
Cons ci ratio: 9.045589e-02	ci left: 1.509016e-01	ci right 1.652982e-01	k: 1580	n:10000
KS ci ratio: 1.312415e-01	ci left: 7.650089e-02	ci right 8.734413e-02	k: 818	n:10000
MGAT5B   10000 perm   2 sec   (5196 perm/sec)   p_kst 8.180000e-02   p_cons 1.580000e-01   p_joint 1.045000e-01

Joint ci ratio: 7.783271e-02	ci left: 1.081524e-01	ci right 1.169606e-01	k: 2250	n:20000
Cons ci ratio: 6.527987e-02	ci left: 1.477407e-01	ci right 1.577605e-01	k: 3054	n:20000
KS ci ratio: 9.336355e-02	ci left: 7.720594e-02	ci right 8.481639e-02	k: 1619	n:20000
MGAT5B   20000 perm   4 sec   (4968 perm/sec)   p_kst 8.095000e-02   p_cons 1.527000e-01   p_joint 1.125000e-01

Outputting figure to mutsig2_images.part000000000105/MGAT5B.2_2542_20000_0.08095_0.1527_0.1125.png
                gene_name: MGAT5B
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.081 
        ci_ks_bounds_left: 0.077 
       ci_ks_bounds_right: 0.085 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.11 
    ci_joint_bounds_right: 0.12 

Current progress: 67 percent done.
MID2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.863342e-02	ci left: 2.997517e-01	ci right 3.179597e-01	k: 3088	n:10000
Cons ci ratio: 7.712279e-02	ci left: 1.973215e-01	ci right 2.132506e-01	k: 2052	n:10000
KS ci ratio: 3.943783e-02	ci left: 4.870525e-01	ci right 5.067493e-01	k: 4969	n:10000
MID2   10000 perm   2 sec   (5652 perm/sec)   p_kst 4.969000e-01   p_cons 2.052000e-01   p_joint 3.088000e-01

Outputting figure to mutsig2_images.part000000000105/MID2.2_2248_10000_0.4969_0.2052_0.3088.png
                gene_name: MID2
               theta_stop: 0.077 
                    nperm: 10000 
                     p_ks: 0.50 
        ci_ks_bounds_left: 0.49 
       ci_ks_bounds_right: 0.51 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.20 
     ci_cons_bounds_right: 0.21 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.32 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000105
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 105 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1702>
Subject: Job 8704273: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1702>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000106> was used as the working directory.
Started at Thu Nov 15 19:34:48 2012
Results reported at Thu Nov 15 20:16:33 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000106.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000106.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 106  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000106.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   2590.07 sec.
    Max Memory :      5934 MB
    Max Swap   :      8470 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
106
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 106
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 106: processing genes 9500 - 9589
Calculating significance of each gene.
Using projection method.
9500	MKLN1	2.188656e-01
9501	MKNK1	1
9502	MKNK2	1.760247e-02
9503	MKRN1	9.441774e-02
9504	MKRN2	1
9505	MKRN3	1
9506	MKS1	1
9507	MKX	1
9508	MLANA	1
9509	MLC1	1
9510	MLEC	1
9511	MLF1	1
9512	MLF1IP	1
9513	MLF2	1
9514	MLH1	1
9515	MLH3	3.574288e-01
9516	MLKL	1
9517	MLL	2.051402e-01
9518	MLL2	1
In gene MLL3 the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 14813   n = 1	mu =   2.02e-07
9519	MLL3	4.491606e-02
9520	MLL4	2.542279e-01
9521	MLL5	8.696904e-02
9522	MLLT1	1
9523	MLLT10	1
9524	MLLT11	1
9525	MLLT3	1
9526	MLLT4	5.640123e-01
9527	MLLT6	1
9528	MLN	1
9529	MLNR	1
9530	MLPH	1
9531	MLST8	1
9532	MLX	1
9533	MLXIP	1
9534	MLXIPL	1
9535	MLYCD	1
9536	MMAA	1
9537	MMAB	1
9538	MMACHC	1
In gene MMADHC the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 919     n = 1	mu =   6.83e-08
9539	MMADHC	2.859871e-02
9540	MMD	1
9541	MMD2	1
9542	MME	1
9543	MMEL1	1
9544	MMGT1	1
9545	MMP1	1
9546	MMP10	1
9547	MMP11	1.388936e-01
In gene MMP12 the following bins exceed PROBCAP:
    THCA-ET-A3BS-TP	categ 6	N = 1081    n = 1	mu =   6.76e-08
9548	MMP12	4.559100e-03
9549	MMP13	1
9550	MMP14	1
9551	MMP15	1
9552	MMP16	2.056110e-01
9553	MMP17	1.699088e-01
9554	MMP19	1
9555	MMP2	1
9556	MMP20	1
9557	MMP21	1
9558	MMP24	1.083062e-01
9559	MMP25	1
9560	MMP26	1
9561	MMP27	1
9562	MMP28	1
9563	MMP3	1.675206e-01
9564	MMP7	1
9565	MMP8	1
9566	MMP9	1
In gene MMRN1 the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 3719    n = 1	mu =   1.07e-07
9567	MMRN1	2.218223e-01
9568	MMRN2	3.340085e-01
9569	MMS19	1.726094e-01
9570	MN1	3.697671e-02
9571	MNAT1	1
9572	MND1	1
9573	MNDA	1
9574	MNS1	1
9575	MNT	1
9576	MNX1	1
9577	MOAP1	1
9578	MOB2	1
9579	MOBKL1A	1
9580	MOBKL1B	1.914158e-02
9581	MOBKL2A	1
9582	MOBKL2B	6.615649e-02
9583	MOBKL2C	1
9584	MOBKL3	4.240135e-02
9585	MOBP	1
9586	MOCOS	1
9587	MOCS1	1
9588	MOCS2	1
9589	MOCS3	1
Done

Running MutSig 2:
Scatter job 106: processing genes 9500 - 9589
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MLL3
Processing conservation and coverage...
66% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.055514e-01	ci left: 1.147668e-01	ci right 1.276548e-01	k: 1211	n:10000
Cons ci ratio: 5.409676e-02	ci left: 3.348846e-01	ci right 3.536063e-01	k: 3442	n:10000
KS ci ratio: 1.052060e-01	ci left: 1.154507e-01	ci right 1.283705e-01	k: 1218	n:10000
MLL3   10000 perm   4 sec   (2585 perm/sec)   p_kst 1.218000e-01   p_cons 3.442000e-01   p_joint 1.211000e-01

Joint ci ratio: 6.097632e-02	ci left: 1.660026e-01	ci right 1.764932e-01	k: 3424	n:20000
Cons ci ratio: 3.772438e-02	ci left: 3.439344e-01	ci right 3.572091e-01	k: 7011	n:20000
KS ci ratio: 7.552655e-02	ci left: 1.141990e-01	ci right 1.232122e-01	k: 2373	n:20000
MLL3   20000 perm   10 sec   (1989 perm/sec)   p_kst 1.186500e-01   p_cons 3.505500e-01   p_joint 1.712000e-01

Outputting figure to mutsig2_images.part000000000106/MLL3.8_14972_20000_0.11865_0.35055_0.1712.png
                gene_name: MLL3
               theta_stop: 0.076 
                    nperm: 20000 
                     p_ks: 0.12 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.17 
     ci_joint_bounds_left: 0.17 
    ci_joint_bounds_right: 0.18 

Current progress: 17 percent done.
MLL
Processing conservation and coverage...
82% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.888965e-02	ci left: 4.940505e-01	ci right 5.137472e-01	k: 5039	n:10000
Cons ci ratio: 5.044595e-02	ci left: 3.668915e-01	ci right 3.859806e-01	k: 3764	n:10000
KS ci ratio: 5.804816e-02	ci left: 3.040161e-01	ci right 3.222929e-01	k: 3131	n:10000
MLL   10000 perm   3 sec   (3517 perm/sec)   p_kst 3.131000e-01   p_cons 3.764000e-01   p_joint 5.039000e-01

Outputting figure to mutsig2_images.part000000000106/MLL.3_12054_10000_0.3131_0.3764_0.5039.png
                gene_name: MLL
               theta_stop: 0.058 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.38 
      ci_cons_bounds_left: 0.37 
     ci_cons_bounds_right: 0.39 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 33 percent done.
MLL4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.497778e-03	ci left: 9.779161e-01	ci right 9.833989e-01	k: 9808	n:10000
Cons ci ratio: 2.049103e-02	ci left: 7.772209e-01	ci right 7.934125e-01	k: 7854	n:10000
KS ci ratio: 3.670990e-02	ci left: 5.228628e-01	ci right 5.425181e-01	k: 5327	n:10000
MLL4   10000 perm   2 sec   (4324 perm/sec)   p_kst 5.327000e-01   p_cons 7.854000e-01   p_joint 9.808000e-01

Outputting figure to mutsig2_images.part000000000106/MLL4.2_8296_10000_0.5327_0.7854_0.9808.png
                gene_name: MLL4
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.53 
        ci_ks_bounds_left: 0.52 
       ci_ks_bounds_right: 0.54 
                   p_cons: 0.79 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.79 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.98 

Current progress: 50 percent done.
MLL5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.958849e-02	ci left: 7.922262e-01	ci right 8.079986e-01	k: 8002	n:10000
KS ci ratio: 4.049311e-02	ci left: 4.738613e-01	ci right 4.935482e-01	k: 4837	n:10000
MLL5   10000 perm   2 sec   (5058 perm/sec)   p_kst 4.837000e-01   p_cons 8.002000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000106/MLL5.2_5677_10000_0.4837_0.8002_1.png
                gene_name: MLL5
               theta_stop: 0.040 
                    nperm: 10000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.47 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.80 
      ci_cons_bounds_left: 0.79 
     ci_cons_bounds_right: 0.81 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
MMP12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.046878e+00	ci left: 6.923711e-04	ci right 2.222014e-03	k: 13	n:10000
Cons ci ratio: 1.834238e-02	ci left: 8.127337e-01	ci right 8.278793e-01	k: 8204	n:10000
KS ci ratio: 1.385306e+00	ci left: 2.814811e-04	ci right 1.441732e-03	k: 7	n:10000
MMP12   10000 perm   1 sec   (6758 perm/sec)   p_kst 7.000000e-04   p_cons 8.204000e-01   p_joint 1.300000e-03

Joint ci ratio: 9.503118e-01	ci left: 4.573361e-04	ci right 1.298826e-03	k: 16	n:20000
Cons ci ratio: 1.301796e-02	ci left: 8.138962e-01	ci right 8.246108e-01	k: 16386	n:20000
KS ci ratio: 1.239272e+00	ci left: 2.057886e-04	ci right 8.540675e-04	k: 9	n:20000
MMP12   20000 perm   3 sec   (5950 perm/sec)   p_kst 4.500000e-04   p_cons 8.193000e-01   p_joint 8.000000e-04

Joint ci ratio: 5.713332e-01	ci left: 1.122805e-03	ci right 2.044728e-03	k: 46	n:30000
Cons ci ratio: 1.064216e-02	ci left: 8.145284e-01	ci right 8.232764e-01	k: 24568	n:30000
KS ci ratio: 9.504544e-01	ci left: 3.048758e-04	ci right 8.659558e-04	k: 16	n:30000
MMP12   30000 perm   5 sec   (5637 perm/sec)   p_kst 5.333333e-04   p_cons 8.189333e-01   p_joint 1.533333e-03

Joint ci ratio: 6.273885e-01	ci left: 6.723615e-04	ci right 1.303718e-03	k: 38	n:40000
Cons ci ratio: 8.730327e-03	ci left: 8.307709e-01	ci right 8.380805e-01	k: 33378	n:40000
KS ci ratio: 8.171313e-01	ci left: 3.447132e-04	ci right 8.325889e-04	k: 22	n:40000
MMP12   40000 perm   7 sec   (5449 perm/sec)   p_kst 5.500000e-04   p_cons 8.344500e-01   p_joint 9.500000e-04

Joint ci ratio: 5.777008e-01	ci left: 6.565396e-04	ci right 1.204088e-03	k: 45	n:50000
Cons ci ratio: 7.852367e-03	ci left: 8.296007e-01	ci right 8.361606e-01	k: 41645	n:50000
KS ci ratio: 6.927359e-01	ci left: 4.212976e-04	ci right 8.799261e-04	k: 31	n:50000
MMP12   50000 perm   9 sec   (5298 perm/sec)   p_kst 6.200000e-04   p_cons 8.329000e-01   p_joint 9.000000e-04

Joint ci ratio: 4.464350e-01	ci left: 9.981151e-04	ci right 1.585169e-03	k: 76	n:60000
Cons ci ratio: 7.188766e-03	ci left: 8.290848e-01	ci right 8.350830e-01	k: 49926	n:60000
KS ci ratio: 6.624021e-01	ci left: 3.924641e-04	ci right 7.917707e-04	k: 34	n:60000
MMP12   60000 perm   12 sec   (5135 perm/sec)   p_kst 5.666667e-04   p_cons 8.321000e-01   p_joint 1.266667e-03

Joint ci ratio: 4.436021e-01	ci left: 8.681973e-04	ci right 1.374622e-03	k: 77	n:70000
Cons ci ratio: 6.645621e-03	ci left: 8.297272e-01	ci right 8.352738e-01	k: 58276	n:70000
KS ci ratio: 6.046833e-01	ci left: 4.203504e-04	ci right 7.945046e-04	k: 41	n:70000
MMP12   70000 perm   14 sec   (5004 perm/sec)   p_kst 5.857143e-04   p_cons 8.325143e-01   p_joint 1.100000e-03

Joint ci ratio: 4.380474e-01	ci left: 7.818886e-04	ci right 1.230570e-03	k: 79	n:80000
Cons ci ratio: 6.222568e-03	ci left: 8.296300e-01	ci right 8.348209e-01	k: 66579	n:80000
KS ci ratio: 5.541950e-01	ci left: 4.531642e-04	ci right 8.096776e-04	k: 49	n:80000
MMP12   80000 perm   16 sec   (4889 perm/sec)   p_kst 6.125000e-04   p_cons 8.322375e-01   p_joint 9.875000e-04

Joint ci ratio: 3.735268e-01	ci left: 9.945505e-04	ci right 1.460778e-03	k: 109	n:90000
Cons ci ratio: 5.868874e-03	ci left: 8.296753e-01	ci right 8.345699e-01	k: 74892	n:90000
KS ci ratio: 5.236661e-01	ci left: 4.604047e-04	ci right 7.953718e-04	k: 55	n:90000
MMP12   90000 perm   19 sec   (4786 perm/sec)   p_kst 6.111111e-04   p_cons 8.321333e-01   p_joint 1.211111e-03

Joint ci ratio: 3.039969e-01	ci left: 1.408003e-03	ci right 1.921596e-03	k: 165	n:100000
Cons ci ratio: 5.560589e-03	ci left: 8.301609e-01	ci right 8.347998e-01	k: 83249	n:100000
KS ci ratio: 4.937155e-01	ci left: 4.753825e-04	ci right 7.947425e-04	k: 62	n:100000
MMP12   100000 perm   21 sec   (4693 perm/sec)   p_kst 6.200000e-04   p_cons 8.324900e-01   p_joint 1.650000e-03

Joint ci ratio: 3.106501e-01	ci left: 1.221253e-03	ci right 1.678409e-03	k: 158	n:110000
Cons ci ratio: 5.289518e-03	ci left: 8.309197e-01	ci right 8.353355e-01	k: 91645	n:110000
KS ci ratio: 4.717624e-01	ci left: 4.800734e-04	ci right 7.836279e-04	k: 68	n:110000
MMP12   110000 perm   24 sec   (4609 perm/sec)   p_kst 6.181818e-04   p_cons 8.331364e-01   p_joint 1.436364e-03

Joint ci ratio: 2.728837e-01	ci left: 1.482631e-03	ci right 1.958635e-03	k: 205	n:120000
Cons ci ratio: 5.067870e-03	ci left: 8.308189e-01	ci right 8.350483e-01	k: 99953	n:120000
KS ci ratio: 4.586598e-01	ci left: 4.694917e-04	ci right 7.555419e-04	k: 72	n:120000
MMP12   120000 perm   27 sec   (4521 perm/sec)   p_kst 6.000000e-04   p_cons 8.329417e-01   p_joint 1.708333e-03

Joint ci ratio: 2.605268e-01	ci left: 1.512151e-03	ci right 1.972071e-03	k: 225	n:130000
Cons ci ratio: 4.869240e-03	ci left: 8.308917e-01	ci right 8.349550e-01	k: 108281	n:130000
KS ci ratio: 4.381328e-01	ci left: 4.811443e-04	ci right 7.573092e-04	k: 79	n:130000
MMP12   130000 perm   29 sec   (4441 perm/sec)   p_kst 6.076923e-04   p_cons 8.329308e-01   p_joint 1.730769e-03

Joint ci ratio: 2.481980e-01	ci left: 1.557963e-03	ci right 2.005934e-03	k: 248	n:140000
Cons ci ratio: 4.691429e-03	ci left: 8.310071e-01	ci right 8.349220e-01	k: 116616	n:140000
KS ci ratio: 4.177406e-01	ci left: 4.977678e-04	ci right 7.664742e-04	k: 87	n:140000
MMP12   140000 perm   32 sec   (4364 perm/sec)   p_kst 6.214286e-04   p_cons 8.329714e-01   p_joint 1.771429e-03

Joint ci ratio: 2.108022e-01	ci left: 2.057598e-03	ci right 2.548624e-03	k: 344	n:150000
Cons ci ratio: 4.532318e-03	ci left: 8.310760e-01	ci right 8.348578e-01	k: 124946	n:150000
KS ci ratio: 4.063577e-01	ci left: 4.944610e-04	ci right 7.521467e-04	k: 92	n:150000
MMP12   150000 perm   35 sec   (4292 perm/sec)   p_kst 6.133333e-04   p_cons 8.329733e-01   p_joint 2.293333e-03

Joint ci ratio: 2.046666e-01	ci left: 2.053421e-03	ci right 2.527403e-03	k: 365	n:160000
Cons ci ratio: 4.390538e-03	ci left: 8.310001e-01	ci right 8.346628e-01	k: 133254	n:160000
KS ci ratio: 3.918763e-01	ci left: 5.029170e-04	ci right 7.532552e-04	k: 99	n:160000
MMP12   160000 perm   38 sec   (4219 perm/sec)   p_kst 6.187500e-04   p_cons 8.328375e-01   p_joint 2.281250e-03

Joint ci ratio: 1.977609e-01	ci left: 2.077871e-03	ci right 2.539364e-03	k: 391	n:170000
Cons ci ratio: 4.265778e-03	ci left: 8.306395e-01	ci right 8.341962e-01	k: 141512	n:170000
KS ci ratio: 3.753464e-01	ci left: 5.211723e-04	ci right 7.669654e-04	k: 108	n:170000
MMP12   170000 perm   41 sec   (4147 perm/sec)   p_kst 6.352941e-04   p_cons 8.324235e-01   p_joint 2.300000e-03

Joint ci ratio: 1.919711e-01	ci left: 2.089265e-03	ci right 2.538116e-03	k: 415	n:180000
Cons ci ratio: 4.140655e-03	ci left: 8.310234e-01	ci right 8.344770e-01	k: 149896	n:180000
KS ci ratio: 3.577251e-01	ci left: 5.477053e-04	ci right 7.910666e-04	k: 119	n:180000
MMP12   180000 perm   44 sec   (4080 perm/sec)   p_kst 6.611111e-04   p_cons 8.327556e-01   p_joint 2.305556e-03

Joint ci ratio: 1.879505e-01	ci left: 2.069533e-03	ci right 2.503771e-03	k: 433	n:190000
Cons ci ratio: 4.031477e-03	ci left: 8.309823e-01	ci right 8.343444e-01	k: 158207	n:190000
KS ci ratio: 3.533391e-01	ci left: 5.332572e-04	ci right 7.666268e-04	k: 122	n:190000
MMP12   190000 perm   47 sec   (4019 perm/sec)   p_kst 6.421053e-04   p_cons 8.326684e-01   p_joint 2.278947e-03

Joint ci ratio: 2.813024e-01	ci left: 8.337051e-04	ci right 1.111087e-03	k: 193	n:200000
Cons ci ratio: 3.928388e-03	ci left: 8.310971e-01	ci right 8.343733e-01	k: 166548	n:200000
KS ci ratio: 3.477324e-01	ci left: 5.248331e-04	ci right 7.500502e-04	k: 126	n:200000
MMP12   200000 perm   50 sec   (3966 perm/sec)   p_kst 6.300000e-04   p_cons 8.327400e-01   p_joint 9.650000e-04

Joint ci ratio: 2.736504e-01	ci left: 8.427425e-04	ci right 1.114193e-03	k: 204	n:210000
Cons ci ratio: 3.831052e-03	ci left: 8.313309e-01	ci right 8.345266e-01	k: 174916	n:210000
KS ci ratio: 3.410841e-01	ci left: 5.215912e-04	ci right 7.401948e-04	k: 131	n:210000
MMP12   210000 perm   54 sec   (3913 perm/sec)   p_kst 6.238095e-04   p_cons 8.329333e-01   p_joint 9.714286e-04

Joint ci ratio: 2.665906e-01	ci left: 8.510511e-04	ci right 1.116925e-03	k: 215	n:220000
Cons ci ratio: 3.745618e-03	ci left: 8.311702e-01	ci right 8.342938e-01	k: 183202	n:220000
KS ci ratio: 3.323843e-01	ci left: 5.270112e-04	ci right 7.410475e-04	k: 138	n:220000
MMP12   220000 perm   57 sec   (3863 perm/sec)   p_kst 6.272727e-04   p_cons 8.327364e-01   p_joint 9.772727e-04

Joint ci ratio: 2.600505e-01	ci left: 8.587190e-04	ci right 1.119338e-03	k: 226	n:230000
Cons ci ratio: 3.661649e-03	ci left: 8.313297e-01	ci right 8.343836e-01	k: 191558	n:230000
KS ci ratio: 3.254349e-01	ci left: 5.280309e-04	ci right 7.370613e-04	k: 144	n:230000
MMP12   230000 perm   60 sec   (3814 perm/sec)   p_kst 6.260870e-04   p_cons 8.328609e-01   p_joint 9.826087e-04

Joint ci ratio: 2.545051e-01	ci left: 8.619194e-04	ci right 1.117046e-03	k: 236	n:240000
Cons ci ratio: 3.585014e-03	ci left: 8.313261e-01	ci right 8.343159e-01	k: 199878	n:240000
KS ci ratio: 3.210385e-01	ci left: 5.213438e-04	ci right 7.243653e-04	k: 148	n:240000
MMP12   240000 perm   64 sec   (3765 perm/sec)   p_kst 6.166667e-04   p_cons 8.328250e-01   p_joint 9.833333e-04

Joint ci ratio: 2.487963e-01	ci left: 8.686684e-04	ci right 1.119133e-03	k: 247	n:250000
Cons ci ratio: 3.513956e-03	ci left: 8.312471e-01	ci right 8.341772e-01	k: 208179	n:250000
KS ci ratio: 3.127512e-01	ci left: 5.299460e-04	ci right 7.299265e-04	k: 156	n:250000
MMP12   250000 perm   67 sec   (3719 perm/sec)   p_kst 6.240000e-04   p_cons 8.327160e-01   p_joint 9.880000e-04

Joint ci ratio: 2.953805e-01	ci left: 5.770722e-04	ci right 7.804799e-04	k: 175	n:260000
Cons ci ratio: 3.445867e-03	ci left: 8.312636e-01	ci right 8.341367e-01	k: 216503	n:260000
KS ci ratio: 3.078877e-01	ci left: 5.272967e-04	ci right 7.225761e-04	k: 161	n:260000
MMP12   260000 perm   71 sec   (3671 perm/sec)   p_kst 6.192308e-04   p_cons 8.327038e-01   p_joint 6.730769e-04

Joint ci ratio: 2.896760e-01	ci left: 5.797231e-04	ci right 7.793959e-04	k: 182	n:270000
Cons ci ratio: 3.379611e-03	ci left: 8.314428e-01	ci right 8.342612e-01	k: 224871	n:270000
KS ci ratio: 3.014435e-01	ci left: 5.317118e-04	ci right 7.237154e-04	k: 168	n:270000
MMP12   270000 perm   75 sec   (3619 perm/sec)   p_kst 6.222222e-04   p_cons 8.328556e-01   p_joint 6.740741e-04

Joint ci ratio: 2.820700e-01	ci left: 5.921736e-04	ci right 7.898272e-04	k: 192	n:280000
Cons ci ratio: 3.316862e-03	ci left: 8.316240e-01	ci right 8.343905e-01	k: 233243	n:280000
KS ci ratio: 2.929004e-01	ci left: 5.457752e-04	ci right 7.362361e-04	k: 178	n:280000
MMP12   280000 perm   78 sec   (3573 perm/sec)   p_kst 6.357143e-04   p_cons 8.330107e-01   p_joint 6.857143e-04

Joint ci ratio: 2.777856e-01	ci left: 5.909912e-04	ci right 7.847301e-04	k: 198	n:290000
Cons ci ratio: 3.260631e-03	ci left: 8.315233e-01	ci right 8.342424e-01	k: 241537	n:290000
KS ci ratio: 2.888940e-01	ci left: 5.429388e-04	ci right 7.293447e-04	k: 183	n:290000
MMP12   290000 perm   82 sec   (3526 perm/sec)   p_kst 6.310345e-04   p_cons 8.328862e-01   p_joint 6.827586e-04

Joint ci ratio: 2.710572e-01	ci left: 6.023322e-04	ci right 7.941926e-04	k: 208	n:300000
Cons ci ratio: 3.206436e-03	ci left: 8.314933e-01	ci right 8.341670e-01	k: 249850	n:300000
KS ci ratio: 2.820765e-01	ci left: 5.526937e-04	ci right 7.371746e-04	k: 192	n:300000
MMP12   300000 perm   86 sec   (3481 perm/sec)   p_kst 6.400000e-04   p_cons 8.328333e-01   p_joint 6.933333e-04

Joint ci ratio: 2.666288e-01	ci left: 6.039611e-04	ci right 7.926724e-04	k: 215	n:310000
Cons ci ratio: 3.155586e-03	ci left: 8.314008e-01	ci right 8.340317e-01	k: 258143	n:310000
KS ci ratio: 2.777918e-01	ci left: 5.528612e-04	ci right 7.341047e-04	k: 198	n:310000
MMP12   310000 perm   90 sec   (3438 perm/sec)   p_kst 6.387097e-04   p_cons 8.327194e-01   p_joint 6.935484e-04

Joint ci ratio: 2.606620e-01	ci left: 6.142727e-04	ci right 8.012111e-04	k: 225	n:320000
Cons ci ratio: 3.106661e-03	ci left: 8.313521e-01	ci right 8.339419e-01	k: 266448	n:320000
KS ci ratio: 2.710631e-01	ci left: 5.646849e-04	ci right 7.445579e-04	k: 208	n:320000
MMP12   320000 perm   94 sec   (3395 perm/sec)   p_kst 6.500000e-04   p_cons 8.326500e-01   p_joint 7.031250e-04

Joint ci ratio: 2.561672e-01	ci left: 6.183309e-04	ci right 8.027409e-04	k: 233	n:330000
Cons ci ratio: 3.059910e-03	ci left: 8.313096e-01	ci right 8.338603e-01	k: 274754	n:330000
KS ci ratio: 2.660190e-01	ci left: 5.701840e-04	ci right 7.478658e-04	k: 216	n:330000
MMP12   330000 perm   98 sec   (3354 perm/sec)   p_kst 6.545455e-04   p_cons 8.325879e-01   p_joint 7.060606e-04

Joint ci ratio: 2.380278e-01	ci left: 7.022426e-04	ci right 8.946654e-04	k: 270	n:340000
Cons ci ratio: 3.013395e-03	ci left: 8.314382e-01	ci right 8.339503e-01	k: 283117	n:340000
KS ci ratio: 2.636016e-01	ci left: 5.643974e-04	ci right 7.384140e-04	k: 220	n:340000
MMP12   340000 perm   103 sec   (3311 perm/sec)   p_kst 6.470588e-04   p_cons 8.326971e-01   p_joint 7.941176e-04

Joint ci ratio: 2.333382e-01	ci left: 7.117519e-04	ci right 9.023838e-04	k: 281	n:350000
Cons ci ratio: 2.969515e-03	ci left: 8.315051e-01	ci right 8.339808e-01	k: 291461	n:350000
KS ci ratio: 2.595234e-01	ci left: 5.669607e-04	ci right 7.386247e-04	k: 227	n:350000
MMP12   350000 perm   107 sec   (3265 perm/sec)   p_kst 6.485714e-04   p_cons 8.327457e-01   p_joint 8.028571e-04

Joint ci ratio: 2.312977e-01	ci left: 7.050613e-04	ci right 8.920139e-04	k: 286	n:360000
Cons ci ratio: 2.930797e-03	ci left: 8.312538e-01	ci right 8.336964e-01	k: 299692	n:360000
KS ci ratio: 2.572773e-01	ci left: 5.616031e-04	ci right 7.299368e-04	k: 231	n:360000
MMP12   360000 perm   111 sec   (3229 perm/sec)   p_kst 6.416667e-04   p_cons 8.324778e-01   p_joint 7.944444e-04

Joint ci ratio: 2.300998e-01	ci left: 6.936446e-04	ci right 8.764820e-04	k: 289	n:370000
Cons ci ratio: 2.890046e-03	ci left: 8.313552e-01	ci right 8.337640e-01	k: 308048	n:370000
KS ci ratio: 2.567265e-01	ci left: 5.489527e-04	ci right 7.130859e-04	k: 232	n:370000
MMP12   370000 perm   116 sec   (3195 perm/sec)   p_kst 6.270270e-04   p_cons 8.325622e-01   p_joint 7.810811e-04

Joint ci ratio: 2.269901e-01	ci left: 6.952383e-04	ci right 8.756724e-04	k: 297	n:380000
Cons ci ratio: 2.852024e-03	ci left: 8.313458e-01	ci right 8.337228e-01	k: 316364	n:380000
KS ci ratio: 2.524290e-01	ci left: 5.542163e-04	ci right 7.167132e-04	k: 240	n:380000
MMP12   380000 perm   120 sec   (3161 perm/sec)   p_kst 6.315789e-04   p_cons 8.325368e-01   p_joint 7.815789e-04

Joint ci ratio: 2.240033e-01	ci left: 6.967659e-04	ci right 8.748888e-04	k: 305	n:390000
Cons ci ratio: 2.816836e-03	ci left: 8.312009e-01	ci right 8.335480e-01	k: 324627	n:390000
KS ci ratio: 2.493443e-01	ci left: 5.544230e-04	ci right 7.146859e-04	k: 246	n:390000
MMP12   390000 perm   125 sec   (3125 perm/sec)   p_kst 6.307692e-04   p_cons 8.323769e-01   p_joint 7.820513e-04

Joint ci ratio: 2.350240e-01	ci left: 6.133658e-04	ci right 7.790056e-04	k: 277	n:400000
Cons ci ratio: 2.781073e-03	ci left: 8.312489e-01	ci right 8.335663e-01	k: 332964	n:400000
KS ci ratio: 2.449213e-01	ci left: 5.616694e-04	ci right 7.207089e-04	k: 255	n:400000
MMP12   400000 perm   129 sec   (3092 perm/sec)   p_kst 6.375000e-04   p_cons 8.324100e-01   p_joint 6.925000e-04

Joint ci ratio: 2.329391e-01	ci left: 6.098858e-04	ci right 7.729144e-04	k: 282	n:410000
Cons ci ratio: 2.747767e-03	ci left: 8.311798e-01	ci right 8.334692e-01	k: 341254	n:410000
KS ci ratio: 2.425644e-01	ci left: 5.594204e-04	ci right 7.160693e-04	k: 260	n:410000
MMP12   410000 perm   134 sec   (3055 perm/sec)   p_kst 6.341463e-04   p_cons 8.323268e-01   p_joint 6.878049e-04

Joint ci ratio: 2.301106e-01	ci left: 6.110648e-04	ci right 7.721433e-04	k: 289	n:420000
Cons ci ratio: 2.713313e-03	ci left: 8.313529e-01	ci right 8.336140e-01	k: 349644	n:420000
KS ci ratio: 2.393754e-01	ci left: 5.617614e-04	ci right 7.166910e-04	k: 267	n:420000
MMP12   420000 perm   139 sec   (3020 perm/sec)   p_kst 6.357143e-04   p_cons 8.324857e-01   p_joint 6.880952e-04

Joint ci ratio: 2.277667e-01	ci left: 6.100072e-04	ci right 7.689389e-04	k: 295	n:430000
Cons ci ratio: 2.681440e-03	ci left: 8.313805e-01	ci right 8.336150e-01	k: 357975	n:430000
KS ci ratio: 2.376094e-01	ci left: 5.574435e-04	ci right 7.098811e-04	k: 271	n:430000
MMP12   430000 perm   144 sec   (2987 perm/sec)   p_kst 6.302326e-04   p_cons 8.325000e-01   p_joint 6.860465e-04

Joint ci ratio: 2.243805e-01	ci left: 6.154399e-04	ci right 7.730737e-04	k: 304	n:440000
Cons ci ratio: 2.649000e-03	ci left: 8.315824e-01	ci right 8.337905e-01	k: 366383	n:440000
KS ci ratio: 2.341900e-01	ci left: 5.618818e-04	ci right 7.130017e-04	k: 279	n:440000
MMP12   440000 perm   149 sec   (2956 perm/sec)   p_kst 6.340909e-04   p_cons 8.326886e-01   p_joint 6.909091e-04

Joint ci ratio: 2.218491e-01	ci left: 6.164498e-04	ci right 7.723177e-04	k: 311	n:450000
Cons ci ratio: 2.619796e-03	ci left: 8.315528e-01	ci right 8.337363e-01	k: 374691	n:450000
KS ci ratio: 2.313162e-01	ci left: 5.640442e-04	ci right 7.136181e-04	k: 286	n:450000
MMP12   450000 perm   154 sec   (2925 perm/sec)   p_kst 6.355556e-04   p_cons 8.326467e-01   p_joint 6.911111e-04

Joint ci ratio: 2.187165e-01	ci left: 6.215346e-04	ci right 7.761709e-04	k: 320	n:460000
Cons ci ratio: 2.591031e-03	ci left: 8.315790e-01	ci right 8.337386e-01	k: 383024	n:460000
KS ci ratio: 2.281578e-01	ci left: 5.681729e-04	ci right 7.164949e-04	k: 294	n:460000
MMP12   460000 perm   159 sec   (2893 perm/sec)   p_kst 6.391304e-04   p_cons 8.326609e-01   p_joint 6.956522e-04

Joint ci ratio: 2.163700e-01	ci left: 6.223927e-04	ci right 7.753604e-04	k: 327	n:470000
Cons ci ratio: 2.563272e-03	ci left: 8.315957e-01	ci right 8.337321e-01	k: 391353	n:470000
KS ci ratio: 2.254979e-01	ci left: 5.701316e-04	ci right 7.169887e-04	k: 301	n:470000
MMP12   470000 perm   164 sec   (2861 perm/sec)   p_kst 6.404255e-04   p_cons 8.326660e-01   p_joint 6.957447e-04

Joint ci ratio: 2.128298e-01	ci left: 6.311116e-04	ci right 7.833531e-04	k: 338	n:480000
Cons ci ratio: 2.536803e-03	ci left: 8.315659e-01	ci right 8.336801e-01	k: 399660	n:480000
KS ci ratio: 2.222106e-01	ci left: 5.759528e-04	ci right 7.218507e-04	k: 310	n:480000
MMP12   480000 perm   170 sec   (2829 perm/sec)   p_kst 6.458333e-04   p_cons 8.326250e-01   p_joint 7.041667e-04

Joint ci ratio: 2.100592e-01	ci left: 6.356267e-04	ci right 7.867046e-04	k: 347	n:490000
Cons ci ratio: 2.510292e-03	ci left: 8.316315e-01	ci right 8.337238e-01	k: 408013	n:490000
KS ci ratio: 2.190629e-01	ci left: 5.815512e-04	ci right 7.264996e-04	k: 319	n:490000
MMP12   490000 perm   175 sec   (2798 perm/sec)   p_kst 6.510204e-04   p_cons 8.326796e-01   p_joint 7.081633e-04

Joint ci ratio: 2.079779e-01	ci left: 6.361814e-04	ci right 7.857022e-04	k: 354	n:500000
Cons ci ratio: 2.484506e-03	ci left: 8.317046e-01	ci right 8.337755e-01	k: 416371	n:500000
KS ci ratio: 2.167054e-01	ci left: 5.831563e-04	ci right 7.267323e-04	k: 326	n:500000
MMP12   500000 perm   181 sec   (2768 perm/sec)   p_kst 6.520000e-04   p_cons 8.327420e-01   p_joint 7.080000e-04

Joint ci ratio: 2.062426e-01	ci left: 6.348618e-04	ci right 7.826704e-04	k: 360	n:510000
Cons ci ratio: 2.460069e-03	ci left: 8.317101e-01	ci right 8.337606e-01	k: 424696	n:510000
KS ci ratio: 2.147443e-01	ci left: 5.828509e-04	ci right 7.248821e-04	k: 332	n:510000
MMP12   510000 perm   186 sec   (2739 perm/sec)   p_kst 6.509804e-04   p_cons 8.327373e-01   p_joint 7.058824e-04

Joint ci ratio: 2.042716e-01	ci left: 6.354226e-04	ci right 7.817715e-04	k: 367	n:520000
Cons ci ratio: 2.436340e-03	ci left: 8.317155e-01	ci right 8.337462e-01	k: 433021	n:520000
KS ci ratio: 2.128356e-01	ci left: 5.825629e-04	ci right 7.230974e-04	k: 338	n:520000
MMP12   520000 perm   192 sec   (2710 perm/sec)   p_kst 6.500000e-04   p_cons 8.327327e-01   p_joint 7.057692e-04

Joint ci ratio: 2.020867e-01	ci left: 6.377600e-04	ci right 7.828822e-04	k: 375	n:530000
Cons ci ratio: 2.412516e-03	ci left: 8.318096e-01	ci right 8.338207e-01	k: 441393	n:530000
KS ci ratio: 2.106715e-01	ci left: 5.840784e-04	ci right 7.233609e-04	k: 345	n:530000
MMP12   530000 perm   198 sec   (2682 perm/sec)   p_kst 6.509434e-04   p_cons 8.328170e-01   p_joint 7.075472e-04

Joint ci ratio: 1.991932e-01	ci left: 6.452969e-04	ci right 7.897764e-04	k: 386	n:540000
Cons ci ratio: 2.389679e-03	ci left: 8.318651e-01	ci right 8.338572e-01	k: 449746	n:540000
KS ci ratio: 2.076909e-01	ci left: 5.908109e-04	ci right 7.294522e-04	k: 355	n:540000
MMP12   540000 perm   203 sec   (2655 perm/sec)   p_kst 6.574074e-04   p_cons 8.328630e-01   p_joint 7.148148e-04

Joint ci ratio: 1.964206e-01	ci left: 6.525740e-04	ci right 7.964058e-04	k: 397	n:550000
Cons ci ratio: 2.367462e-03	ci left: 8.319205e-01	ci right 8.338942e-01	k: 458100	n:550000
KS ci ratio: 2.045539e-01	ci left: 5.990369e-04	ci right 7.372199e-04	k: 366	n:550000
MMP12   550000 perm   209 sec   (2626 perm/sec)   p_kst 6.654545e-04   p_cons 8.329091e-01   p_joint 7.218182e-04

Joint ci ratio: 1.949568e-01	ci left: 6.511102e-04	ci right 7.934229e-04	k: 403	n:560000
Cons ci ratio: 2.345899e-03	ci left: 8.319686e-01	ci right 8.339244e-01	k: 466451	n:560000
KS ci ratio: 2.029021e-01	ci left: 5.985075e-04	ci right 7.353154e-04	k: 372	n:560000
MMP12   560000 perm   215 sec   (2599 perm/sec)   p_kst 6.642857e-04   p_cons 8.329482e-01   p_joint 7.196429e-04

Joint ci ratio: 1.703555e-01	ci left: 8.490110e-04	ci right 1.008763e-03	k: 528	n:570000
Cons ci ratio: 2.324870e-03	ci left: 8.320204e-01	ci right 8.339587e-01	k: 474805	n:570000
KS ci ratio: 2.007604e-01	ci left: 6.013333e-04	ci right 7.371585e-04	k: 380	n:570000
MMP12   570000 perm   222 sec   (2573 perm/sec)   p_kst 6.666667e-04   p_cons 8.329912e-01   p_joint 9.263158e-04

Joint ci ratio: 1.682996e-01	ci left: 8.558371e-04	ci right 1.014733e-03	k: 541	n:580000
Cons ci ratio: 2.304940e-03	ci left: 8.320048e-01	ci right 8.339264e-01	k: 483121	n:580000
KS ci ratio: 1.991981e-01	ci left: 6.007923e-04	ci right 7.353110e-04	k: 386	n:580000
MMP12   580000 perm   228 sec   (2547 perm/sec)   p_kst 6.655172e-04   p_cons 8.329672e-01   p_joint 9.327586e-04

Joint ci ratio: 1.667681e-01	ci left: 8.575699e-04	ci right 1.015193e-03	k: 551	n:590000
Cons ci ratio: 2.285499e-03	ci left: 8.319915e-01	ci right 8.338968e-01	k: 491438	n:590000
KS ci ratio: 1.974206e-01	ci left: 6.018847e-04	ci right 7.353008e-04	k: 393	n:590000
MMP12   590000 perm   234 sec   (2522 perm/sec)   p_kst 6.661017e-04   p_cons 8.329458e-01   p_joint 9.338983e-04

Joint ci ratio: 1.574767e-01	ci left: 9.504204e-04	ci right 1.114459e-03	k: 618	n:600000
Cons ci ratio: 2.266271e-03	ci left: 8.320121e-01	ci right 8.339014e-01	k: 499775	n:600000
KS ci ratio: 1.956899e-01	ci left: 6.029459e-04	ci right 7.352858e-04	k: 400	n:600000
MMP12   600000 perm   240 sec   (2497 perm/sec)   p_kst 6.666667e-04   p_cons 8.329583e-01   p_joint 1.030000e-03

Joint ci ratio: 1.398206e-01	ci left: 1.196895e-03	ci right 1.378386e-03	k: 784	n:610000
Cons ci ratio: 2.248076e-03	ci left: 8.319630e-01	ci right 8.338371e-01	k: 508070	n:610000
KS ci ratio: 1.937664e-01	ci left: 6.055370e-04	ci right 7.369852e-04	k: 408	n:610000
MMP12   610000 perm   247 sec   (2473 perm/sec)   p_kst 6.688525e-04   p_cons 8.329016e-01   p_joint 1.285246e-03

Joint ci ratio: 1.385901e-01	ci left: 1.199384e-03	ci right 1.379521e-03	k: 798	n:620000
Cons ci ratio: 2.228904e-03	ci left: 8.320919e-01	ci right 8.339502e-01	k: 516474	n:620000
KS ci ratio: 1.921292e-01	ci left: 6.065152e-04	ci right 7.369334e-04	k: 415	n:620000
MMP12   620000 perm   253 sec   (2450 perm/sec)   p_kst 6.693548e-04   p_cons 8.330226e-01   p_joint 1.287097e-03

Joint ci ratio: 1.377312e-01	ci left: 1.195671e-03	ci right 1.374045e-03	k: 808	n:630000
Cons ci ratio: 2.211752e-03	ci left: 8.320226e-01	ci right 8.338664e-01	k: 524756	n:630000
KS ci ratio: 1.912125e-01	ci left: 6.029324e-04	ci right 7.318897e-04	k: 419	n:630000
MMP12   630000 perm   260 sec   (2427 perm/sec)   p_kst 6.650794e-04   p_cons 8.329460e-01   p_joint 1.282540e-03

Joint ci ratio: 1.362236e-01	ci left: 1.204150e-03	ci right 1.381664e-03	k: 826	n:640000
Cons ci ratio: 2.193794e-03	ci left: 8.321074e-01	ci right 8.339364e-01	k: 533135	n:640000
KS ci ratio: 1.881021e-01	ci left: 6.143484e-04	ci right 7.433658e-04	k: 433	n:640000
MMP12   640000 perm   266 sec   (2404 perm/sec)   p_kst 6.765625e-04   p_cons 8.330234e-01   p_joint 1.290625e-03

Joint ci ratio: 1.352460e-01	ci left: 1.203459e-03	ci right 1.379495e-03	k: 838	n:650000
Cons ci ratio: 2.176880e-03	ci left: 8.321111e-01	ci right 8.339260e-01	k: 541463	n:650000
KS ci ratio: 1.868153e-01	ci left: 6.136945e-04	ci right 7.415929e-04	k: 439	n:650000
MMP12   650000 perm   273 sec   (2382 perm/sec)   p_kst 6.753846e-04   p_cons 8.330200e-01   p_joint 1.289231e-03

Joint ci ratio: 1.339742e-01	ci left: 1.208651e-03	ci right 1.383652e-03	k: 854	n:660000
Cons ci ratio: 2.159540e-03	ci left: 8.322194e-01	ci right 8.340201e-01	k: 549860	n:660000
KS ci ratio: 1.861822e-01	ci left: 6.087292e-04	ci right 7.351143e-04	k: 442	n:660000
MMP12   660000 perm   280 sec   (2361 perm/sec)   p_kst 6.696970e-04   p_cons 8.331212e-01   p_joint 1.293939e-03

Joint ci ratio: 1.331978e-01	ci left: 1.205038e-03	ci right 1.378425e-03	k: 864	n:670000
Cons ci ratio: 2.143112e-03	ci left: 8.322588e-01	ci right 8.340458e-01	k: 558213	n:670000
KS ci ratio: 1.849341e-01	ci left: 6.081829e-04	ci right 7.335132e-04	k: 448	n:670000
MMP12   670000 perm   286 sec   (2339 perm/sec)   p_kst 6.686567e-04   p_cons 8.331537e-01   p_joint 1.289552e-03

Joint ci ratio: 1.321327e-01	ci left: 1.207222e-03	ci right 1.379425e-03	k: 878	n:680000
Cons ci ratio: 2.126885e-03	ci left: 8.323191e-01	ci right 8.340927e-01	k: 566581	n:680000
KS ci ratio: 1.839132e-01	ci left: 6.062524e-04	ci right 7.304183e-04	k: 453	n:680000
MMP12   680000 perm   293 sec   (2319 perm/sec)   p_kst 6.661765e-04   p_cons 8.332074e-01   p_joint 1.291176e-03

Joint ci ratio: 1.314618e-01	ci left: 1.202339e-03	ci right 1.372906e-03	k: 887	n:690000
Cons ci ratio: 2.111473e-03	ci left: 8.323183e-01	ci right 8.340789e-01	k: 574908	n:690000
KS ci ratio: 1.833090e-01	ci left: 6.016140e-04	ci right 7.243802e-04	k: 456	n:690000
MMP12   690000 perm   300 sec   (2298 perm/sec)   p_kst 6.608696e-04   p_cons 8.332000e-01   p_joint 1.285507e-03

Joint ci ratio: 1.305825e-01	ci left: 1.201744e-03	ci right 1.370998e-03	k: 899	n:700000
Cons ci ratio: 2.096660e-03	ci left: 8.322816e-01	ci right 8.340299e-01	k: 583210	n:700000
KS ci ratio: 1.821175e-01	ci left: 6.011989e-04	ci right 7.229950e-04	k: 462	n:700000
MMP12   700000 perm   307 sec   (2279 perm/sec)   p_kst 6.600000e-04   p_cons 8.331571e-01   p_joint 1.284286e-03

Joint ci ratio: 1.292251e-01	ci left: 1.210709e-03	ci right 1.379317e-03	k: 918	n:710000
Cons ci ratio: 2.082418e-03	ci left: 8.322108e-01	ci right 8.339470e-01	k: 591487	n:710000
KS ci ratio: 1.796125e-01	ci left: 6.102125e-04	ci right 7.319495e-04	k: 475	n:710000
MMP12   710000 perm   314 sec   (2260 perm/sec)   p_kst 6.690141e-04   p_cons 8.330803e-01   p_joint 1.292958e-03

Joint ci ratio: 1.281144e-01	ci left: 1.215401e-03	ci right 1.383097e-03	k: 934	n:720000
Cons ci ratio: 2.067677e-03	ci left: 8.322478e-01	ci right 8.339717e-01	k: 599840	n:720000
KS ci ratio: 1.781218e-01	ci left: 6.123511e-04	ci right 7.333915e-04	k: 483	n:720000
MMP12   720000 perm   321 sec   (2242 perm/sec)   p_kst 6.708333e-04   p_cons 8.331111e-01   p_joint 1.297222e-03

Joint ci ratio: 1.275702e-01	ci left: 1.209360e-03	ci right 1.375460e-03	k: 942	n:730000
Cons ci ratio: 2.054134e-03	ci left: 8.321630e-01	ci right 8.338755e-01	k: 608105	n:730000
KS ci ratio: 1.773906e-01	ci left: 6.091983e-04	ci right 7.290682e-04	k: 487	n:730000
MMP12   730000 perm   328 sec   (2225 perm/sec)   p_kst 6.671233e-04   p_cons 8.330205e-01   p_joint 1.290411e-03

Joint ci ratio: 1.268994e-01	ci left: 1.206100e-03	ci right 1.370816e-03	k: 952	n:740000
Cons ci ratio: 2.040586e-03	ci left: 8.321171e-01	ci right 8.338181e-01	k: 616397	n:740000
KS ci ratio: 1.766684e-01	ci left: 6.061317e-04	ci right 7.248607e-04	k: 491	n:740000
MMP12   740000 perm   335 sec   (2208 perm/sec)   p_kst 6.635135e-04   p_cons 8.329689e-01   p_joint 1.286486e-03

Joint ci ratio: 1.259773e-01	ci left: 1.208095e-03	ci right 1.371796e-03	k: 966	n:750000
Cons ci ratio: 2.026934e-03	ci left: 8.321232e-01	ci right 8.338129e-01	k: 624727	n:750000
KS ci ratio: 1.757776e-01	ci left: 6.044225e-04	ci right 7.221564e-04	k: 496	n:750000
MMP12   750000 perm   342 sec   (2190 perm/sec)   p_kst 6.613333e-04   p_cons 8.329693e-01   p_joint 1.288000e-03

Joint ci ratio: 1.252029e-01	ci left: 1.207493e-03	ci right 1.370031e-03	k: 978	n:760000
Cons ci ratio: 2.013666e-03	ci left: 8.321134e-01	ci right 8.337920e-01	k: 633045	n:760000
KS ci ratio: 1.747262e-01	ci left: 6.040180e-04	ci right 7.208950e-04	k: 502	n:760000
MMP12   760000 perm   350 sec   (2173 perm/sec)   p_kst 6.605263e-04   p_cons 8.329539e-01   p_joint 1.286842e-03

Joint ci ratio: 1.243171e-01	ci left: 1.209425e-03	ci right 1.370987e-03	k: 992	n:770000
Cons ci ratio: 2.000571e-03	ci left: 8.321156e-01	ci right 8.337832e-01	k: 641372	n:770000
KS ci ratio: 1.733529e-01	ci left: 6.061107e-04	ci right 7.223744e-04	k: 510	n:770000
MMP12   770000 perm   357 sec   (2156 perm/sec)   p_kst 6.623377e-04   p_cons 8.329506e-01   p_joint 1.288312e-03

Joint ci ratio: 1.233885e-01	ci left: 1.212555e-03	ci right 1.373237e-03	k: 1007	n:780000
Cons ci ratio: 1.987838e-03	ci left: 8.321023e-01	ci right 8.337593e-01	k: 649687	n:780000
KS ci ratio: 1.716808e-01	ci left: 6.106071e-04	ci right 7.264866e-04	k: 520	n:780000
MMP12   780000 perm   365 sec   (2140 perm/sec)   p_kst 6.666667e-04   p_cons 8.329321e-01   p_joint 1.291026e-03

Joint ci ratio: 1.227812e-01	ci left: 1.209475e-03	ci right 1.368902e-03	k: 1017	n:790000
Cons ci ratio: 1.974717e-03	ci left: 8.321782e-01	ci right 8.338244e-01	k: 658072	n:790000
KS ci ratio: 1.708631e-01	ci left: 6.089357e-04	ci right 7.238908e-04	k: 525	n:790000
MMP12   790000 perm   373 sec   (2120 perm/sec)   p_kst 6.645570e-04   p_cons 8.330025e-01   p_joint 1.287342e-03

Joint ci ratio: 1.223020e-01	ci left: 1.204050e-03	ci right 1.362097e-03	k: 1025	n:800000
Cons ci ratio: 1.962468e-03	ci left: 8.321646e-01	ci right 8.338005e-01	k: 666387	n:800000
KS ci ratio: 1.702174e-01	ci left: 6.061105e-04	ci right 7.200555e-04	k: 529	n:800000
MMP12   800000 perm   380 sec   (2104 perm/sec)   p_kst 6.612500e-04   p_cons 8.329838e-01   p_joint 1.281250e-03

Joint ci ratio: 1.215344e-01	ci left: 1.204745e-03	ci right 1.361820e-03	k: 1038	n:810000
Cons ci ratio: 1.950211e-03	ci left: 8.321847e-01	ci right 8.338104e-01	k: 674729	n:810000
KS ci ratio: 1.691043e-01	ci left: 6.069027e-04	ci right 7.201745e-04	k: 536	n:810000
MMP12   810000 perm   388 sec   (2088 perm/sec)   p_kst 6.617284e-04   p_cons 8.329988e-01   p_joint 1.281481e-03

Joint ci ratio: 1.209540e-01	ci left: 1.201878e-03	ci right 1.357777e-03	k: 1048	n:820000
Cons ci ratio: 1.938734e-03	ci left: 8.321250e-01	ci right 8.337410e-01	k: 683006	n:820000
KS ci ratio: 1.680128e-01	ci left: 6.076779e-04	ci right 7.202882e-04	k: 543	n:820000
MMP12   820000 perm   396 sec   (2072 perm/sec)   p_kst 6.621951e-04   p_cons 8.329341e-01   p_joint 1.278049e-03

Joint ci ratio: 1.202114e-01	ci left: 1.202588e-03	ci right 1.357553e-03	k: 1061	n:830000
Cons ci ratio: 1.926755e-03	ci left: 8.321681e-01	ci right 8.337742e-01	k: 691367	n:830000
KS ci ratio: 1.673987e-01	ci left: 6.049734e-04	ci right 7.166315e-04	k: 547	n:830000
MMP12   830000 perm   404 sec   (2056 perm/sec)   p_kst 6.590361e-04   p_cons 8.329723e-01   p_joint 1.278313e-03

Joint ci ratio: 1.192050e-01	ci left: 1.209058e-03	ci right 1.363461e-03	k: 1079	n:840000
Cons ci ratio: 1.915422e-03	ci left: 8.321482e-01	ci right 8.337448e-01	k: 699676	n:840000
KS ci ratio: 1.660406e-01	ci left: 6.080387e-04	ci right 7.192610e-04	k: 556	n:840000
MMP12   840000 perm   412 sec   (2040 perm/sec)   p_kst 6.619048e-04   p_cons 8.329476e-01   p_joint 1.284524e-03

Joint ci ratio: 1.186027e-01	ci left: 1.207390e-03	ci right 1.360747e-03	k: 1090	n:850000
Cons ci ratio: 1.904600e-03	ci left: 8.320828e-01	ci right 8.336702e-01	k: 707946	n:850000
KS ci ratio: 1.653004e-01	ci left: 6.065237e-04	ci right 7.169252e-04	k: 561	n:850000
MMP12   850000 perm   420 sec   (2025 perm/sec)   p_kst 6.600000e-04   p_cons 8.328776e-01   p_joint 1.282353e-03

Joint ci ratio: 1.180094e-01	ci left: 1.205763e-03	ci right 1.358093e-03	k: 1101	n:860000
Cons ci ratio: 1.893556e-03	ci left: 8.320784e-01	ci right 8.336566e-01	k: 716267	n:860000
KS ci ratio: 1.641362e-01	ci left: 6.083900e-04	ci right 7.182742e-04	k: 569	n:860000
MMP12   860000 perm   428 sec   (2010 perm/sec)   p_kst 6.616279e-04   p_cons 8.328686e-01   p_joint 1.280233e-03

Joint ci ratio: 1.175307e-01	ci left: 1.201944e-03	ci right 1.353132e-03	k: 1110	n:870000
Cons ci ratio: 1.882795e-03	ci left: 8.320603e-01	ci right 8.336295e-01	k: 724576	n:870000
KS ci ratio: 1.638495e-01	ci left: 6.036014e-04	ci right 7.124115e-04	k: 571	n:870000
MMP12   870000 perm   436 sec   (1994 perm/sec)   p_kst 6.563218e-04   p_cons 8.328460e-01   p_joint 1.275862e-03

Joint ci ratio: 1.170055e-01	ci left: 1.199315e-03	ci right 1.349453e-03	k: 1120	n:880000
Cons ci ratio: 1.872047e-03	ci left: 8.320676e-01	ci right 8.336279e-01	k: 732907	n:880000
KS ci ratio: 1.628559e-01	ci left: 6.043717e-04	ci right 7.125953e-04	k: 578	n:880000
MMP12   880000 perm   445 sec   (1979 perm/sec)   p_kst 6.568182e-04   p_cons 8.328489e-01   p_joint 1.272727e-03

Joint ci ratio: 1.166941e-01	ci left: 1.192384e-03	ci right 1.341229e-03	k: 1126	n:890000
Cons ci ratio: 1.861466e-03	ci left: 8.320771e-01	ci right 8.336286e-01	k: 741240	n:890000
KS ci ratio: 1.627160e-01	ci left: 5.986587e-04	ci right 7.057581e-04	k: 579	n:890000
MMP12   890000 perm   453 sec   (1965 perm/sec)   p_kst 6.505618e-04   p_cons 8.328539e-01   p_joint 1.265169e-03

Joint ci ratio: 1.158742e-01	ci left: 1.196396e-03	ci right 1.344621e-03	k: 1142	n:900000
Cons ci ratio: 1.851432e-03	ci left: 8.320308e-01	ci right 8.335737e-01	k: 749523	n:900000
KS ci ratio: 1.616052e-01	ci left: 6.005352e-04	ci right 7.071656e-04	k: 587	n:900000
MMP12   900000 perm   462 sec   (1949 perm/sec)   p_kst 6.522222e-04   p_cons 8.328033e-01   p_joint 1.268889e-03

Joint ci ratio: 1.285453e-01	ci left: 9.552459e-04	ci right 1.087524e-03	k: 928	n:910000
Cons ci ratio: 1.841246e-03	ci left: 8.320328e-01	ci right 8.335673e-01	k: 757849	n:910000
KS ci ratio: 1.609226e-01	ci left: 5.992086e-04	ci right 7.051107e-04	k: 592	n:910000
MMP12   910000 perm   470 sec   (1934 perm/sec)   p_kst 6.505495e-04   p_cons 8.328011e-01   p_joint 1.019780e-03

Joint ci ratio: 1.275873e-01	ci left: 9.595928e-04	ci right 1.091407e-03	k: 942	n:920000
Cons ci ratio: 1.830991e-03	ci left: 8.320708e-01	ci right 8.335967e-01	k: 766208	n:920000
KS ci ratio: 1.591866e-01	ci left: 6.062601e-04	ci right 7.121421e-04	k: 605	n:920000
MMP12   920000 perm   479 sec   (1921 perm/sec)   p_kst 6.576087e-04   p_cons 8.328348e-01   p_joint 1.023913e-03

Joint ci ratio: 1.265181e-01	ci left: 9.659323e-04	ci right 1.097422e-03	k: 958	n:930000
Cons ci ratio: 1.821165e-03	ci left: 8.320680e-01	ci right 8.335858e-01	k: 774530	n:930000
KS ci ratio: 1.581460e-01	ci left: 6.080018e-04	ci right 7.134280e-04	k: 613	n:930000
MMP12   930000 perm   487 sec   (1908 perm/sec)   p_kst 6.591398e-04   p_cons 8.328280e-01   p_joint 1.030108e-03

Joint ci ratio: 1.257986e-01	ci left: 9.669893e-04	ci right 1.097819e-03	k: 969	n:940000
Cons ci ratio: 1.811280e-03	ci left: 8.320984e-01	ci right 8.336080e-01	k: 782883	n:940000
KS ci ratio: 1.571256e-01	ci left: 6.097087e-04	ci right 7.146844e-04	k: 621	n:940000
MMP12   940000 perm   496 sec   (1895 perm/sec)   p_kst 6.606383e-04   p_cons 8.328543e-01   p_joint 1.030851e-03

Joint ci ratio: 1.252191e-01	ci left: 9.659866e-04	ci right 1.096034e-03	k: 978	n:950000
Cons ci ratio: 1.801930e-03	ci left: 8.320702e-01	ci right 8.335719e-01	k: 791181	n:950000
KS ci ratio: 1.564980e-01	ci left: 6.083473e-04	ci right 7.126310e-04	k: 626	n:950000
MMP12   950000 perm   505 sec   (1882 perm/sec)   p_kst 6.589474e-04   p_cons 8.328221e-01   p_joint 1.029474e-03

Joint ci ratio: 1.318578e-01	ci left: 8.591345e-04	ci right 9.814091e-04	k: 882	n:960000
Cons ci ratio: 1.792683e-03	ci left: 8.320489e-01	ci right 8.335428e-01	k: 799485	n:960000
KS ci ratio: 1.562493e-01	ci left: 6.040121e-04	ci right 7.073727e-04	k: 628	n:960000
MMP12   960000 perm   514 sec   (1869 perm/sec)   p_kst 6.541667e-04   p_cons 8.327969e-01   p_joint 9.187500e-04

Joint ci ratio: 1.306787e-01	ci left: 8.662308e-04	ci right 9.883274e-04	k: 898	n:970000
Cons ci ratio: 1.783517e-03	ci left: 8.320373e-01	ci right 8.335236e-01	k: 807798	n:970000
KS ci ratio: 1.550216e-01	ci left: 6.076930e-04	ci right 7.107905e-04	k: 638	n:970000
MMP12   970000 perm   522 sec   (1856 perm/sec)   p_kst 6.577320e-04   p_cons 8.327814e-01   p_joint 9.257732e-04

Joint ci ratio: 1.299578e-01	ci left: 8.672631e-04	ci right 9.887790e-04	k: 908	n:980000
Cons ci ratio: 1.774796e-03	ci left: 8.319779e-01	ci right 8.334568e-01	k: 816064	n:980000
KS ci ratio: 1.540601e-01	ci left: 6.093397e-04	ci right 7.120162e-04	k: 646	n:980000
MMP12   980000 perm   531 sec   (1844 perm/sec)   p_kst 6.591837e-04   p_cons 8.327184e-01   p_joint 9.265306e-04

Joint ci ratio: 1.295312e-01	ci left: 8.643667e-04	ci right 9.850486e-04	k: 914	n:990000
Cons ci ratio: 1.765741e-03	ci left: 8.319926e-01	ci right 8.334640e-01	k: 824402	n:990000
KS ci ratio: 1.537045e-01	ci left: 6.060983e-04	ci right 7.079711e-04	k: 649	n:990000
MMP12   990000 perm   540 sec   (1832 perm/sec)   p_kst 6.555556e-04   p_cons 8.327293e-01   p_joint 9.232323e-04

Joint ci ratio: 1.091986e-01	ci left: 1.216708e-03	ci right 1.358207e-03	k: 1286	n:1000000
Cons ci ratio: 1.756595e-03	ci left: 8.320431e-01	ci right 8.335069e-01	k: 832776	n:1000000
KS ci ratio: 1.527671e-01	ci left: 6.077306e-04	ci right 7.091979e-04	k: 657	n:1000000
MMP12   1000000 perm   549 sec   (1820 perm/sec)   p_kst 6.570000e-04   p_cons 8.327760e-01   p_joint 1.286000e-03

Joint ci ratio: 1.086931e-01	ci left: 1.216218e-03	ci right 1.356964e-03	k: 1298	n:1010000
Cons ci ratio: 1.747808e-03	ci left: 8.320579e-01	ci right 8.335144e-01	k: 841115	n:1010000
KS ci ratio: 1.523051e-01	ci left: 6.055227e-04	ci right 7.062876e-04	k: 661	n:1010000
MMP12   1010000 perm   558 sec   (1809 perm/sec)   p_kst 6.544554e-04   p_cons 8.327871e-01   p_joint 1.285149e-03

Joint ci ratio: 1.081945e-01	ci left: 1.215740e-03	ci right 1.355744e-03	k: 1310	n:1020000
Cons ci ratio: 1.739787e-03	ci left: 8.319703e-01	ci right 8.334200e-01	k: 849350	n:1020000
KS ci ratio: 1.512801e-01	ci left: 6.080746e-04	ci right 7.085216e-04	k: 670	n:1020000
MMP12   1020000 perm   567 sec   (1798 perm/sec)   p_kst 6.568627e-04   p_cons 8.326961e-01   p_joint 1.284314e-03

Joint ci ratio: 1.078252e-01	ci left: 1.212439e-03	ci right 1.351555e-03	k: 1319	n:1030000
Cons ci ratio: 1.730718e-03	ci left: 8.320711e-01	ci right 8.335134e-01	k: 857777	n:1030000
KS ci ratio: 1.504971e-01	ci left: 6.087105e-04	ci right 7.086952e-04	k: 677	n:1030000
MMP12   1030000 perm   577 sec   (1786 perm/sec)   p_kst 6.572816e-04   p_cons 8.327932e-01   p_joint 1.280583e-03

Joint ci ratio: 1.072579e-01	ci left: 1.213880e-03	ci right 1.352383e-03	k: 1333	n:1040000
Cons ci ratio: 1.722174e-03	ci left: 8.321074e-01	ci right 8.335426e-01	k: 866139	n:1040000
KS ci ratio: 1.498356e-01	ci left: 6.084100e-04	ci right 7.078667e-04	k: 683	n:1040000
MMP12   1040000 perm   586 sec   (1774 perm/sec)   p_kst 6.567308e-04   p_cons 8.328260e-01   p_joint 1.281731e-03

Joint ci ratio: 1.066994e-01	ci left: 1.215296e-03	ci right 1.353193e-03	k: 1347	n:1050000
Cons ci ratio: 1.714178e-03	ci left: 8.320744e-01	ci right 8.335028e-01	k: 874429	n:1050000
KS ci ratio: 1.493996e-01	ci left: 6.062825e-04	ci right 7.050772e-04	k: 687	n:1050000
MMP12   1050000 perm   595 sec   (1763 perm/sec)   p_kst 6.542857e-04   p_cons 8.327895e-01   p_joint 1.282857e-03

Joint ci ratio: 1.061495e-01	ci left: 1.216687e-03	ci right 1.353986e-03	k: 1361	n:1060000
Cons ci ratio: 1.706061e-03	ci left: 8.320797e-01	ci right 8.335015e-01	k: 882759	n:1060000
KS ci ratio: 1.485384e-01	ci left: 6.078287e-04	ci right 7.062538e-04	k: 695	n:1060000
MMP12   1060000 perm   605 sec   (1751 perm/sec)   p_kst 6.556604e-04   p_cons 8.327915e-01   p_joint 1.283962e-03

Joint ci ratio: 1.056850e-01	ci left: 1.216234e-03	ci right 1.352844e-03	k: 1373	n:1070000
Cons ci ratio: 1.698218e-03	ci left: 8.320588e-01	ci right 8.334740e-01	k: 891061	n:1070000
KS ci ratio: 1.476919e-01	ci left: 6.093477e-04	ci right 7.074067e-04	k: 703	n:1070000
MMP12   1070000 perm   615 sec   (1740 perm/sec)   p_kst 6.570093e-04   p_cons 8.327673e-01   p_joint 1.283178e-03

Joint ci ratio: 1.052266e-01	ci left: 1.215790e-03	ci right 1.351722e-03	k: 1385	n:1080000
Cons ci ratio: 1.690324e-03	ci left: 8.320643e-01	ci right 8.334728e-01	k: 899391	n:1080000
KS ci ratio: 1.470665e-01	ci left: 6.090562e-04	ci right 7.066170e-04	k: 709	n:1080000
MMP12   1080000 perm   625 sec   (1728 perm/sec)   p_kst 6.564815e-04   p_cons 8.327694e-01   p_joint 1.282407e-03

Joint ci ratio: 1.050755e-01	ci left: 1.208209e-03	ci right 1.343087e-03	k: 1389	n:1090000
Cons ci ratio: 1.682456e-03	ci left: 8.320834e-01	ci right 8.334854e-01	k: 907736	n:1090000
KS ci ratio: 1.469635e-01	ci left: 6.043522e-04	ci right 7.010855e-04	k: 710	n:1090000
MMP12   1090000 perm   635 sec   (1717 perm/sec)   p_kst 6.513761e-04   p_cons 8.327853e-01   p_joint 1.274312e-03

Joint ci ratio: 1.044014e-01	ci left: 1.213161e-03	ci right 1.347669e-03	k: 1407	n:1100000
Cons ci ratio: 1.675015e-03	ci left: 8.320494e-01	ci right 8.334452e-01	k: 916023	n:1100000
KS ci ratio: 1.461435e-01	ci left: 6.058641e-04	ci right 7.022512e-04	k: 718	n:1100000
MMP12   1100000 perm   645 sec   (1706 perm/sec)   p_kst 6.527273e-04   p_cons 8.327482e-01   p_joint 1.279091e-03

Joint ci ratio: 1.224434e-01	ci left: 8.660275e-04	ci right 9.798458e-04	k: 1023	n:1110000
Cons ci ratio: 1.667261e-03	ci left: 8.320846e-01	ci right 8.334740e-01	k: 924386	n:1110000
KS ci ratio: 1.457388e-01	ci left: 6.038779e-04	ci right 6.996598e-04	k: 722	n:1110000
MMP12   1110000 perm   655 sec   (1696 perm/sec)   p_kst 6.504505e-04   p_cons 8.327802e-01   p_joint 9.216216e-04

Joint ci ratio: 1.037772e-01	ci left: 1.206280e-03	ci right 1.339177e-03	k: 1424	n:1120000
Cons ci ratio: 1.660109e-03	ci left: 8.320361e-01	ci right 8.334194e-01	k: 932656	n:1120000
KS ci ratio: 1.453375e-01	ci left: 6.019274e-04	ci right 6.971143e-04	k: 726	n:1120000
MMP12   1120000 perm   664 sec   (1686 perm/sec)   p_kst 6.482143e-04   p_cons 8.327286e-01   p_joint 1.271429e-03

Joint ci ratio: 1.033070e-01	ci left: 1.206812e-03	ci right 1.339129e-03	k: 1437	n:1130000
Cons ci ratio: 1.652580e-03	ci left: 8.320673e-01	ci right 8.334443e-01	k: 941015	n:1130000
KS ci ratio: 1.446428e-01	ci left: 6.025706e-04	ci right 6.973643e-04	k: 733	n:1130000
MMP12   1130000 perm   674 sec   (1676 perm/sec)   p_kst 6.486726e-04   p_cons 8.327566e-01   p_joint 1.271681e-03

Joint ci ratio: 1.027369e-01	ci left: 1.209899e-03	ci right 1.341778e-03	k: 1453	n:1140000
Cons ci ratio: 1.645288e-03	ci left: 8.320751e-01	ci right 8.334460e-01	k: 949348	n:1140000
KS ci ratio: 1.437639e-01	ci left: 6.048949e-04	ci right 6.994264e-04	k: 742	n:1140000
MMP12   1140000 perm   684 sec   (1666 perm/sec)   p_kst 6.508772e-04   p_cons 8.327614e-01   p_joint 1.274561e-03

Joint ci ratio: 1.022807e-01	ci left: 1.210393e-03	ci right 1.341705e-03	k: 1466	n:1150000
Cons ci ratio: 1.638490e-03	ci left: 8.320148e-01	ci right 8.333800e-01	k: 957603	n:1150000
KS ci ratio: 1.430914e-01	ci left: 6.055034e-04	ci right 6.996497e-04	k: 749	n:1150000
MMP12   1150000 perm   694 sec   (1656 perm/sec)   p_kst 6.513043e-04   p_cons 8.326983e-01   p_joint 1.274783e-03

Joint ci ratio: 1.016930e-01	ci left: 1.214240e-03	ci right 1.345167e-03	k: 1483	n:1160000
Cons ci ratio: 1.631397e-03	ci left: 8.320204e-01	ci right 8.333797e-01	k: 965933	n:1160000
KS ci ratio: 1.424283e-01	ci left: 6.061025e-04	ci right 6.998681e-04	k: 756	n:1160000
MMP12   1160000 perm   705 sec   (1646 perm/sec)   p_kst 6.517241e-04   p_cons 8.327009e-01   p_joint 1.278448e-03

Joint ci ratio: 1.190613e-01	ci left: 8.705205e-04	ci right 9.815467e-04	k: 1082	n:1170000
Cons ci ratio: 1.624630e-03	ci left: 8.319856e-01	ci right 8.333392e-01	k: 974216	n:1170000
KS ci ratio: 1.419603e-01	ci left: 6.050436e-04	ci right 6.983118e-04	k: 761	n:1170000
MMP12   1170000 perm   715 sec   (1637 perm/sec)   p_kst 6.504274e-04   p_cons 8.326632e-01   p_joint 9.247863e-04

Joint ci ratio: 1.185696e-01	ci left: 8.705436e-04	ci right 9.810822e-04	k: 1091	n:1180000
Cons ci ratio: 1.618059e-03	ci left: 8.319319e-01	ci right 8.332800e-01	k: 982476	n:1180000
KS ci ratio: 1.412208e-01	ci left: 6.064557e-04	ci right 6.994135e-04	k: 769	n:1180000
MMP12   1180000 perm   725 sec   (1628 perm/sec)   p_kst 6.516949e-04   p_cons 8.326068e-01   p_joint 9.245763e-04

Joint ci ratio: 1.180304e-01	ci left: 8.713828e-04	ci right 9.814897e-04	k: 1101	n:1190000
Cons ci ratio: 1.611110e-03	ci left: 8.319583e-01	ci right 8.333006e-01	k: 990830	n:1190000
KS ci ratio: 1.405832e-01	ci left: 6.070344e-04	ci right 6.996257e-04	k: 776	n:1190000
MMP12   1190000 perm   736 sec   (1617 perm/sec)   p_kst 6.521008e-04   p_cons 8.326303e-01   p_joint 9.252101e-04

Joint ci ratio: 1.173928e-01	ci left: 8.738269e-04	ci right 9.836048e-04	k: 1113	n:1200000
Cons ci ratio: 1.604490e-03	ci left: 8.319425e-01	ci right 8.332792e-01	k: 999134	n:1200000
KS ci ratio: 1.397759e-01	ci left: 6.092128e-04	ci right 7.015583e-04	k: 785	n:1200000
MMP12   1200000 perm   746 sec   (1608 perm/sec)   p_kst 6.541667e-04   p_cons 8.326117e-01   p_joint 9.275000e-04

Joint ci ratio: 9.924814e-02	ci left: 1.223686e-03	ci right 1.352274e-03	k: 1557	n:1210000
Cons ci ratio: 1.597923e-03	ci left: 8.319319e-01	ci right 8.332632e-01	k: 1007444	n:1210000
KS ci ratio: 1.390699e-01	ci left: 6.105590e-04	ci right 7.026023e-04	k: 793	n:1210000
MMP12   1210000 perm   757 sec   (1599 perm/sec)   p_kst 6.553719e-04   p_cons 8.325983e-01   p_joint 1.286777e-03

Joint ci ratio: 1.163530e-01	ci left: 8.754162e-04	ci right 9.843526e-04	k: 1133	n:1220000
Cons ci ratio: 1.591056e-03	ci left: 8.319881e-01	ci right 8.333136e-01	k: 1015835	n:1220000
KS ci ratio: 1.387210e-01	ci left: 6.087191e-04	ci right 7.002358e-04	k: 797	n:1220000
MMP12   1220000 perm   767 sec   (1590 perm/sec)   p_kst 6.532787e-04   p_cons 8.326516e-01   p_joint 9.286885e-04

Joint ci ratio: 1.159956e-01	ci left: 8.738246e-04	ci right 9.822061e-04	k: 1140	n:1230000
Cons ci ratio: 1.584790e-03	ci left: 8.319529e-01	ci right 8.332732e-01	k: 1024115	n:1230000
KS ci ratio: 1.383748e-01	ci left: 6.069094e-04	ci right 6.979076e-04	k: 801	n:1230000
MMP12   1230000 perm   778 sec   (1581 perm/sec)   p_kst 6.512195e-04   p_cons 8.326138e-01   p_joint 9.268293e-04

Joint ci ratio: 1.155911e-01	ci left: 8.730424e-04	ci right 9.809235e-04	k: 1148	n:1240000
Cons ci ratio: 1.578506e-03	ci left: 8.319344e-01	ci right 8.332495e-01	k: 1032415	n:1240000
KS ci ratio: 1.379456e-01	ci left: 6.059079e-04	ci right 6.964509e-04	k: 806	n:1240000
MMP12   1240000 perm   788 sec   (1573 perm/sec)   p_kst 6.500000e-04   p_cons 8.325927e-01   p_joint 9.258065e-04

Joint ci ratio: 1.152407e-01	ci left: 8.714963e-04	ci right 9.788378e-04	k: 1155	n:1250000
Cons ci ratio: 1.571805e-03	ci left: 8.320037e-01	ci right 8.333132e-01	k: 1040824	n:1250000
KS ci ratio: 1.375203e-01	ci left: 6.049227e-04	ci right 6.950171e-04	k: 811	n:1250000
MMP12   1250000 perm   799 sec   (1564 perm/sec)   p_kst 6.488000e-04   p_cons 8.326592e-01   p_joint 9.240000e-04

Joint ci ratio: 1.147455e-01	ci left: 8.722879e-04	ci right 9.792339e-04	k: 1165	n:1260000
Cons ci ratio: 1.565580e-03	ci left: 8.320018e-01	ci right 8.333062e-01	k: 1049145	n:1260000
KS ci ratio: 1.370150e-01	ci left: 6.047201e-04	ci right 6.944264e-04	k: 817	n:1260000
MMP12   1260000 perm   810 sec   (1556 perm/sec)   p_kst 6.484127e-04   p_cons 8.326548e-01   p_joint 9.246032e-04

Joint ci ratio: 1.143052e-01	ci left: 8.723031e-04	ci right 9.788129e-04	k: 1174	n:1270000
Cons ci ratio: 1.559543e-03	ci left: 8.319795e-01	ci right 8.332788e-01	k: 1057440	n:1270000
KS ci ratio: 1.365153e-01	ci left: 6.045213e-04	ci right 6.938444e-04	k: 823	n:1270000
MMP12   1270000 perm   821 sec   (1547 perm/sec)   p_kst 6.480315e-04   p_cons 8.326299e-01   p_joint 9.244094e-04

Joint ci ratio: 1.141114e-01	ci left: 8.685239e-04	ci right 9.743803e-04	k: 1178	n:1280000
Cons ci ratio: 1.553689e-03	ci left: 8.319372e-01	ci right 8.332316e-01	k: 1065709	n:1280000
KS ci ratio: 1.363502e-01	ci left: 6.013076e-04	ci right 6.900397e-04	k: 825	n:1280000
MMP12   1280000 perm   832 sec   (1539 perm/sec)   p_kst 6.445313e-04   p_cons 8.325852e-01   p_joint 9.203125e-04

Joint ci ratio: 9.655922e-02	ci left: 1.214345e-03	ci right 1.338299e-03	k: 1645	n:1290000
Cons ci ratio: 1.547525e-03	ci left: 8.319632e-01	ci right 8.332524e-01	k: 1074065	n:1290000
KS ci ratio: 1.357760e-01	ci left: 6.018879e-04	ci right 6.903015e-04	k: 832	n:1290000
MMP12   1290000 perm   843 sec   (1530 perm/sec)   p_kst 6.449612e-04   p_cons 8.326085e-01   p_joint 1.275194e-03

Joint ci ratio: 9.618014e-02	ci left: 1.214763e-03	ci right 1.338245e-03	k: 1658	n:1300000
Cons ci ratio: 1.541409e-03	ci left: 8.319933e-01	ci right 8.332775e-01	k: 1082427	n:1300000
KS ci ratio: 1.353704e-01	ci left: 6.009737e-04	ci right 6.889680e-04	k: 837	n:1300000
MMP12   1300000 perm   854 sec   (1522 perm/sec)   p_kst 6.438462e-04   p_cons 8.326362e-01   p_joint 1.275385e-03

Joint ci ratio: 9.577682e-02	ci left: 1.215920e-03	ci right 1.338973e-03	k: 1672	n:1310000
Cons ci ratio: 1.535487e-03	ci left: 8.320009e-01	ci right 8.332801e-01	k: 1090760	n:1310000
KS ci ratio: 1.346492e-01	ci left: 6.030244e-04	ci right 6.908108e-04	k: 846	n:1310000
MMP12   1310000 perm   866 sec   (1513 perm/sec)   p_kst 6.458015e-04   p_cons 8.326412e-01   p_joint 1.276336e-03

Joint ci ratio: 9.554882e-02	ci left: 1.212624e-03	ci right 1.335035e-03	k: 1680	n:1320000
Cons ci ratio: 1.529773e-03	ci left: 8.319825e-01	ci right 8.332570e-01	k: 1099059	n:1320000
KS ci ratio: 1.344115e-01	ci left: 6.006522e-04	ci right 6.879266e-04	k: 849	n:1320000
MMP12   1320000 perm   878 sec   (1504 perm/sec)   p_kst 6.431818e-04   p_cons 8.326205e-01   p_joint 1.272727e-03

Joint ci ratio: 1.046738e-01	ci left: 9.982347e-04	ci right 1.109220e-03	k: 1400	n:1330000
Cons ci ratio: 1.523687e-03	ci left: 8.320442e-01	ci right 8.333137e-01	k: 1107464	n:1330000
KS ci ratio: 1.340180e-01	ci left: 5.997692e-04	ci right 6.866398e-04	k: 854	n:1330000
MMP12   1330000 perm   889 sec   (1496 perm/sec)   p_kst 6.421053e-04   p_cons 8.326797e-01   p_joint 1.052632e-03

Joint ci ratio: 1.042283e-01	ci left: 9.995065e-04	ci right 1.110131e-03	k: 1412	n:1340000
Cons ci ratio: 1.517592e-03	ci left: 8.321200e-01	ci right 8.333845e-01	k: 1115889	n:1340000
KS ci ratio: 1.333953e-01	ci left: 6.010637e-04	ci right 6.876853e-04	k: 862	n:1340000
MMP12   1340000 perm   901 sec   (1487 perm/sec)   p_kst 6.432836e-04   p_cons 8.327530e-01   p_joint 1.053731e-03

Joint ci ratio: 1.038615e-01	ci left: 9.993174e-04	ci right 1.109508e-03	k: 1422	n:1350000
Cons ci ratio: 1.511674e-03	ci left: 8.321754e-01	ci right 8.334350e-01	k: 1124288	n:1350000
KS ci ratio: 1.330874e-01	ci left: 5.994756e-04	ci right 6.856531e-04	k: 866	n:1350000
MMP12   1350000 perm   913 sec   (1479 perm/sec)   p_kst 6.414815e-04   p_cons 8.328059e-01   p_joint 1.053333e-03

Joint ci ratio: 1.035346e-01	ci left: 9.984155e-04	ci right 1.108139e-03	k: 1431	n:1360000
Cons ci ratio: 1.506106e-03	ci left: 8.321777e-01	ci right 8.334327e-01	k: 1132616	n:1360000
KS ci ratio: 1.325533e-01	ci left: 6.000437e-04	ci right 6.859295e-04	k: 873	n:1360000
MMP12   1360000 perm   925 sec   (1471 perm/sec)   p_kst 6.419118e-04   p_cons 8.328059e-01   p_joint 1.052206e-03

Joint ci ratio: 1.032109e-01	ci left: 9.975273e-04	ci right 1.106789e-03	k: 1440	n:1370000
Cons ci ratio: 1.500528e-03	ci left: 8.321931e-01	ci right 8.334435e-01	k: 1140962	n:1370000
KS ci ratio: 1.320256e-01	ci left: 6.006042e-04	ci right 6.862012e-04	k: 880	n:1370000
MMP12   1370000 perm   936 sec   (1463 perm/sec)   p_kst 6.423358e-04   p_cons 8.328190e-01   p_joint 1.051095e-03

Joint ci ratio: 1.026777e-01	ci left: 1.000889e-03	ci right 1.109918e-03	k: 1455	n:1380000
Cons ci ratio: 1.495215e-03	ci left: 8.321706e-01	ci right 8.334165e-01	k: 1149256	n:1380000
KS ci ratio: 1.312825e-01	ci left: 6.032598e-04	ci right 6.887135e-04	k: 890	n:1380000
MMP12   1380000 perm   948 sec   (1455 perm/sec)   p_kst 6.449275e-04   p_cons 8.327942e-01   p_joint 1.054348e-03

Joint ci ratio: 1.023618e-01	ci left: 9.999968e-04	ci right 1.108574e-03	k: 1464	n:1390000
Cons ci ratio: 1.489873e-03	ci left: 8.321642e-01	ci right 8.334056e-01	k: 1157572	n:1390000
KS ci ratio: 1.308427e-01	ci left: 6.030948e-04	ci right 6.882168e-04	k: 896	n:1390000
MMP12   1390000 perm   961 sec   (1447 perm/sec)   p_kst 6.446043e-04   p_cons 8.327856e-01   p_joint 1.053237e-03

Joint ci ratio: 9.238724e-02	ci left: 1.224940e-03	ci right 1.344281e-03	k: 1797	n:1400000
Cons ci ratio: 1.484424e-03	ci left: 8.321887e-01	ci right 8.334256e-01	k: 1165931	n:1400000
KS ci ratio: 1.299044e-01	ci left: 6.077700e-04	ci right 6.928892e-04	k: 909	n:1400000
MMP12   1400000 perm   973 sec   (1439 perm/sec)   p_kst 6.492857e-04   p_cons 8.328079e-01   p_joint 1.283571e-03

Joint ci ratio: 9.205505e-02	ci left: 1.225260e-03	ci right 1.344180e-03	k: 1810	n:1410000
Cons ci ratio: 1.479181e-03	ci left: 8.321852e-01	ci right 8.334177e-01	k: 1174251	n:1410000
KS ci ratio: 1.293371e-01	ci left: 6.089494e-04	ci right 6.938327e-04	k: 917	n:1410000
MMP12   1410000 perm   985 sec   (1432 perm/sec)   p_kst 6.503546e-04   p_cons 8.328021e-01   p_joint 1.283688e-03

Joint ci ratio: 9.167610e-02	ci left: 1.226952e-03	ci right 1.345520e-03	k: 1825	n:1420000
Cons ci ratio: 1.473952e-03	ci left: 8.321894e-01	ci right 8.334176e-01	k: 1182582	n:1420000
KS ci ratio: 1.287771e-01	ci left: 6.101129e-04	ci right 6.947621e-04	k: 925	n:1420000
MMP12   1420000 perm   997 sec   (1424 perm/sec)   p_kst 6.514085e-04   p_cons 8.328042e-01   p_joint 1.285211e-03

Joint ci ratio: 9.137637e-02	ci left: 1.226571e-03	ci right 1.344694e-03	k: 1837	n:1430000
Cons ci ratio: 1.468885e-03	ci left: 8.321734e-01	ci right 8.333973e-01	k: 1190884	n:1430000
KS ci ratio: 1.283620e-01	ci left: 6.099072e-04	ci right 6.942343e-04	k: 931	n:1430000
MMP12   1430000 perm   1010 sec   (1417 perm/sec)   p_kst 6.510490e-04   p_cons 8.327860e-01   p_joint 1.284615e-03

Joint ci ratio: 9.100570e-02	ci left: 1.228233e-03	ci right 1.346010e-03	k: 1852	n:1440000
Cons ci ratio: 1.464068e-03	ci left: 8.321200e-01	ci right 8.333398e-01	k: 1199132	n:1440000
KS ci ratio: 1.277465e-01	ci left: 6.117216e-04	ci right 6.958633e-04	k: 940	n:1440000
MMP12   1440000 perm   1022 sec   (1408 perm/sec)   p_kst 6.527778e-04   p_cons 8.327306e-01   p_joint 1.286111e-03

Joint ci ratio: 9.066381e-02	ci left: 1.229198e-03	ci right 1.346602e-03	k: 1866	n:1450000
Cons ci ratio: 1.458997e-03	ci left: 8.321246e-01	ci right 8.333402e-01	k: 1207463	n:1450000
KS ci ratio: 1.272740e-01	ci left: 6.121764e-04	ci right 6.960458e-04	k: 947	n:1450000
MMP12   1450000 perm   1035 sec   (1401 perm/sec)   p_kst 6.531034e-04   p_cons 8.327331e-01   p_joint 1.286897e-03

Joint ci ratio: 9.034980e-02	ci left: 1.229481e-03	ci right 1.346484e-03	k: 1879	n:1460000
Cons ci ratio: 1.453964e-03	ci left: 8.321320e-01	ci right 8.333434e-01	k: 1215798	n:1460000
KS ci ratio: 1.270065e-01	ci left: 6.106360e-04	ci right 6.941052e-04	k: 951	n:1460000
MMP12   1460000 perm   1048 sec   (1393 perm/sec)   p_kst 6.513699e-04   p_cons 8.327384e-01   p_joint 1.286986e-03

Joint ci ratio: 1.054733e-01	ci left: 8.892518e-04	ci right 9.889217e-04	k: 1379	n:1470000
Cons ci ratio: 1.449086e-03	ci left: 8.321195e-01	ci right 8.333268e-01	k: 1224104	n:1470000
KS ci ratio: 1.264761e-01	ci left: 6.117517e-04	ci right 6.949980e-04	k: 959	n:1470000
MMP12   1470000 perm   1061 sec   (1386 perm/sec)   p_kst 6.523810e-04   p_cons 8.327238e-01   p_joint 9.380952e-04

Joint ci ratio: 8.975502e-02	ci left: 1.229378e-03	ci right 1.345560e-03	k: 1904	n:1480000
Cons ci ratio: 1.444099e-03	ci left: 8.321376e-01	ci right 8.333408e-01	k: 1232455	n:1480000
KS ci ratio: 1.260827e-01	ci left: 6.115442e-04	ci right 6.944841e-04	k: 965	n:1480000
MMP12   1480000 perm   1073 sec   (1379 perm/sec)   p_kst 6.520270e-04   p_cons 8.327399e-01   p_joint 1.286486e-03

Joint ci ratio: 8.933381e-02	ci left: 1.232937e-03	ci right 1.348881e-03	k: 1922	n:1490000
Cons ci ratio: 1.439340e-03	ci left: 8.321212e-01	ci right 8.333204e-01	k: 1240755	n:1490000
KS ci ratio: 1.253707e-01	ci left: 6.145903e-04	ci right 6.974377e-04	k: 976	n:1490000
MMP12   1490000 perm   1086 sec   (1372 perm/sec)   p_kst 6.550336e-04   p_cons 8.327215e-01   p_joint 1.289933e-03

Joint ci ratio: 8.896438e-02	ci left: 1.235147e-03	ci right 1.350793e-03	k: 1938	n:1500000
Cons ci ratio: 1.434470e-03	ci left: 8.321358e-01	ci right 8.333309e-01	k: 1249101	n:1500000
KS ci ratio: 1.247339e-01	ci left: 6.169512e-04	ci right 6.996631e-04	k: 986	n:1500000
MMP12   1500000 perm   1099 sec   (1365 perm/sec)   p_kst 6.573333e-04   p_cons 8.327340e-01   p_joint 1.292000e-03

Joint ci ratio: 8.848626e-02	ci left: 1.240566e-03	ci right 1.356062e-03	k: 1959	n:1510000
Cons ci ratio: 1.429696e-03	ci left: 8.321408e-01	ci right 8.333320e-01	k: 1257433	n:1510000
KS ci ratio: 1.241066e-01	ci left: 6.192819e-04	ci right 7.018581e-04	k: 996	n:1510000
MMP12   1510000 perm   1112 sec   (1358 perm/sec)   p_kst 6.596026e-04   p_cons 8.327371e-01   p_joint 1.297351e-03

Joint ci ratio: 8.803802e-02	ci left: 1.245272e-03	ci right 1.360589e-03	k: 1979	n:1520000
Cons ci ratio: 1.424805e-03	ci left: 8.321781e-01	ci right 8.333653e-01	k: 1265814	n:1520000
KS ci ratio: 1.234887e-01	ci left: 6.215829e-04	ci right 7.040231e-04	k: 1006	n:1520000
MMP12   1520000 perm   1125 sec   (1351 perm/sec)   p_kst 6.618421e-04   p_cons 8.327724e-01   p_joint 1.301974e-03

Joint ci ratio: 8.768437e-02	ci left: 1.247361e-03	ci right 1.362384e-03	k: 1995	n:1530000
Cons ci ratio: 1.420137e-03	ci left: 8.321809e-01	ci right 8.333642e-01	k: 1274143	n:1530000
KS ci ratio: 1.229405e-01	ci left: 6.232214e-04	ci right 7.054852e-04	k: 1015	n:1530000
MMP12   1530000 perm   1138 sec   (1345 perm/sec)   p_kst 6.633987e-04   p_cons 8.327732e-01   p_joint 1.303922e-03

Joint ci ratio: 8.737844e-02	ci left: 1.248153e-03	ci right 1.362827e-03	k: 2009	n:1540000
Cons ci ratio: 1.415623e-03	ci left: 8.321622e-01	ci right 8.333417e-01	k: 1282439	n:1540000
KS ci ratio: 1.223994e-01	ci left: 6.248394e-04	ci right 7.069275e-04	k: 1024	n:1540000
MMP12   1540000 perm   1151 sec   (1338 perm/sec)   p_kst 6.649351e-04   p_cons 8.327526e-01   p_joint 1.304545e-03

Joint ci ratio: 8.711880e-02	ci left: 1.247673e-03	ci right 1.361945e-03	k: 2021	n:1550000
Cons ci ratio: 1.411041e-03	ci left: 8.321657e-01	ci right 8.333414e-01	k: 1290769	n:1550000
KS ci ratio: 1.221021e-01	ci left: 6.239353e-04	ci right 7.056911e-04	k: 1029	n:1550000
MMP12   1550000 perm   1164 sec   (1332 perm/sec)   p_kst 6.638710e-04   p_cons 8.327542e-01   p_joint 1.303871e-03

Joint ci ratio: 9.561516e-02	ci left: 1.024811e-03	ci right 1.128338e-03	k: 1678	n:1560000
Cons ci ratio: 1.406688e-03	ci left: 8.321326e-01	ci right 8.333046e-01	k: 1299042	n:1560000
KS ci ratio: 1.219248e-01	ci left: 6.218000e-04	ci right 7.031492e-04	k: 1032	n:1560000
MMP12   1560000 perm   1177 sec   (1325 perm/sec)   p_kst 6.615385e-04   p_cons 8.327192e-01   p_joint 1.075641e-03

Joint ci ratio: 9.527525e-02	ci left: 1.025744e-03	ci right 1.128977e-03	k: 1690	n:1570000
Cons ci ratio: 1.402275e-03	ci left: 8.321197e-01	ci right 8.332880e-01	k: 1307346	n:1570000
KS ci ratio: 1.213970e-01	ci left: 6.233976e-04	ci right 7.045774e-04	k: 1041	n:1570000
MMP12   1570000 perm   1191 sec   (1319 perm/sec)   p_kst 6.630573e-04   p_cons 8.327045e-01   p_joint 1.076433e-03

Joint ci ratio: 1.161605e-01	ci left: 6.784083e-04	ci right 7.626797e-04	k: 1137	n:1580000
Cons ci ratio: 1.397856e-03	ci left: 8.321165e-01	ci right 8.332811e-01	k: 1315665	n:1580000
KS ci ratio: 1.211647e-01	ci left: 6.219068e-04	ci right 7.027265e-04	k: 1045	n:1580000
MMP12   1580000 perm   1204 sec   (1312 perm/sec)   p_kst 6.613924e-04   p_cons 8.326994e-01   p_joint 7.196203e-04

Joint ci ratio: 9.466146e-02	ci left: 1.026350e-03	ci right 1.128941e-03	k: 1712	n:1590000
Cons ci ratio: 1.393453e-03	ci left: 8.321183e-01	ci right 8.332792e-01	k: 1323992	n:1590000
KS ci ratio: 1.207040e-01	ci left: 6.228747e-04	ci right 7.034904e-04	k: 1053	n:1590000
MMP12   1590000 perm   1217 sec   (1306 perm/sec)   p_kst 6.622642e-04   p_cons 8.326994e-01   p_joint 1.076730e-03

Joint ci ratio: 9.422229e-02	ci left: 1.029699e-03	ci right 1.132121e-03	k: 1728	n:1600000
Cons ci ratio: 1.389030e-03	ci left: 8.321326e-01	ci right 8.332899e-01	k: 1332339	n:1600000
KS ci ratio: 1.199662e-01	ci left: 6.268623e-04	ci right 7.074629e-04	k: 1066	n:1600000
MMP12   1600000 perm   1231 sec   (1300 perm/sec)   p_kst 6.662500e-04   p_cons 8.327119e-01   p_joint 1.080000e-03

Joint ci ratio: 8.530274e-02	ci left: 1.254049e-03	ci right 1.366391e-03	k: 2108	n:1610000
Cons ci ratio: 1.384713e-03	ci left: 8.321337e-01	ci right 8.332874e-01	k: 1340665	n:1610000
KS ci ratio: 1.196303e-01	ci left: 6.265838e-04	ci right 7.069071e-04	k: 1072	n:1610000
MMP12   1610000 perm   1244 sec   (1294 perm/sec)   p_kst 6.658385e-04   p_cons 8.327112e-01   p_joint 1.309317e-03

Joint ci ratio: 9.365527e-02	ci left: 1.029645e-03	ci right 1.131412e-03	k: 1749	n:1620000
Cons ci ratio: 1.380276e-03	ci left: 8.321670e-01	ci right 8.333170e-01	k: 1349043	n:1620000
KS ci ratio: 1.191868e-01	ci left: 6.275067e-04	ci right 7.076291e-04	k: 1080	n:1620000
MMP12   1620000 perm   1257 sec   (1288 perm/sec)   p_kst 6.666667e-04   p_cons 8.327426e-01   p_joint 1.079630e-03

Joint ci ratio: 9.349527e-02	ci left: 1.026923e-03	ci right 1.128238e-03	k: 1755	n:1630000
Cons ci ratio: 1.375928e-03	ci left: 8.321906e-01	ci right 8.333370e-01	k: 1357406	n:1630000
KS ci ratio: 1.190219e-01	ci left: 6.254426e-04	ci right 7.051832e-04	k: 1083	n:1630000
MMP12   1630000 perm   1271 sec   (1282 perm/sec)   p_kst 6.644172e-04   p_cons 8.327644e-01   p_joint 1.076687e-03

Joint ci ratio: 9.320379e-02	ci left: 1.027212e-03	ci right 1.128222e-03	k: 1766	n:1640000
Cons ci ratio: 1.371747e-03	ci left: 8.321883e-01	ci right 8.333312e-01	k: 1365727	n:1640000
KS ci ratio: 1.186394e-01	ci left: 6.257704e-04	ci right 7.052784e-04	k: 1090	n:1640000
MMP12   1640000 perm   1285 sec   (1277 perm/sec)   p_kst 6.646341e-04   p_cons 8.327604e-01   p_joint 1.076829e-03

Joint ci ratio: 9.288888e-02	ci left: 1.028090e-03	ci right 1.128826e-03	k: 1778	n:1650000
Cons ci ratio: 1.367832e-03	ci left: 8.321393e-01	ci right 8.332789e-01	k: 1373971	n:1650000
KS ci ratio: 1.184226e-01	ci left: 6.243302e-04	ci right 7.035001e-04	k: 1094	n:1650000
MMP12   1650000 perm   1298 sec   (1271 perm/sec)   p_kst 6.630303e-04   p_cons 8.327097e-01   p_joint 1.077576e-03

Joint ci ratio: 9.252543e-02	ci left: 1.030135e-03	ci right 1.130655e-03	k: 1792	n:1660000
Cons ci ratio: 1.363589e-03	ci left: 8.321651e-01	ci right 8.333012e-01	k: 1382338	n:1660000
KS ci ratio: 1.178854e-01	ci left: 6.264153e-04	ci right 7.054641e-04	k: 1104	n:1660000
MMP12   1660000 perm   1312 sec   (1265 perm/sec)   p_kst 6.650602e-04   p_cons 8.327337e-01   p_joint 1.079518e-03

Joint ci ratio: 1.126978e-01	ci left: 6.831458e-04	ci right 7.653081e-04	k: 1208	n:1670000
Cons ci ratio: 1.359492e-03	ci left: 8.321684e-01	ci right 8.333011e-01	k: 1390668	n:1670000
KS ci ratio: 1.176197e-01	ci left: 6.255701e-04	ci right 7.043220e-04	k: 1109	n:1670000
MMP12   1670000 perm   1326 sec   (1259 perm/sec)   p_kst 6.640719e-04   p_cons 8.327353e-01   p_joint 7.233533e-04

Joint ci ratio: 1.124193e-01	ci left: 6.825504e-04	ci right 7.644247e-04	k: 1214	n:1680000
Cons ci ratio: 1.355351e-03	ci left: 8.321884e-01	ci right 8.333176e-01	k: 1399026	n:1680000
KS ci ratio: 1.173031e-01	ci left: 6.253129e-04	ci right 7.038059e-04	k: 1115	n:1680000
MMP12   1680000 perm   1341 sec   (1253 perm/sec)   p_kst 6.636905e-04   p_cons 8.327536e-01   p_joint 7.226190e-04

Joint ci ratio: 1.118224e-01	ci left: 6.859883e-04	ci right 7.678093e-04	k: 1227	n:1690000
Cons ci ratio: 1.351363e-03	ci left: 8.321844e-01	ci right 8.333103e-01	k: 1407344	n:1690000
KS ci ratio: 1.166773e-01	ci left: 6.285057e-04	ci right 7.069496e-04	k: 1127	n:1690000
MMP12   1690000 perm   1355 sec   (1247 perm/sec)   p_kst 6.668639e-04   p_cons 8.327479e-01   p_joint 7.260355e-04

Joint ci ratio: 1.114148e-01	ci left: 6.870994e-04	ci right 7.687346e-04	k: 1236	n:1700000
Cons ci ratio: 1.347421e-03	ci left: 8.321781e-01	ci right 8.333007e-01	k: 1415658	n:1700000
KS ci ratio: 1.162657e-01	ci left: 6.293774e-04	ci right 7.076340e-04	k: 1135	n:1700000
MMP12   1700000 perm   1369 sec   (1242 perm/sec)   p_kst 6.676471e-04   p_cons 8.327400e-01   p_joint 7.270588e-04

Joint ci ratio: 9.663316e-02	ci left: 9.149367e-04	ci right 1.008404e-03	k: 1643	n:1710000
Cons ci ratio: 1.343253e-03	ci left: 8.322258e-01	ci right 8.333450e-01	k: 1424064	n:1710000
KS ci ratio: 1.158078e-01	ci left: 6.308073e-04	ci right 7.089116e-04	k: 1144	n:1710000
MMP12   1710000 perm   1383 sec   (1236 perm/sec)   p_kst 6.690058e-04   p_cons 8.327860e-01   p_joint 9.608187e-04

Joint ci ratio: 1.106570e-01	ci left: 6.887191e-04	ci right 7.699539e-04	k: 1253	n:1720000
Cons ci ratio: 1.339337e-03	ci left: 8.322287e-01	ci right 8.333446e-01	k: 1432394	n:1720000
KS ci ratio: 1.154554e-01	ci left: 6.310919e-04	ci right 7.089774e-04	k: 1151	n:1720000
MMP12   1720000 perm   1398 sec   (1231 perm/sec)   p_kst 6.691860e-04   p_cons 8.327872e-01   p_joint 7.284884e-04

Joint ci ratio: 1.103057e-01	ci left: 6.892346e-04	ci right 7.702553e-04	k: 1261	n:1730000
Cons ci ratio: 1.335465e-03	ci left: 8.322292e-01	ci right 8.333419e-01	k: 1440720	n:1730000
KS ci ratio: 1.151062e-01	ci left: 6.313735e-04	ci right 7.090421e-04	k: 1158	n:1730000
MMP12   1730000 perm   1413 sec   (1225 perm/sec)   p_kst 6.693642e-04   p_cons 8.327861e-01   p_joint 7.289017e-04

Joint ci ratio: 9.564900e-02	ci left: 9.182324e-04	ci right 1.011028e-03	k: 1677	n:1740000
Cons ci ratio: 1.331556e-03	ci left: 8.322447e-01	ci right 8.333542e-01	k: 1449072	n:1740000
KS ci ratio: 1.145637e-01	ci left: 6.338852e-04	ci right 7.114705e-04	k: 1169	n:1740000
MMP12   1740000 perm   1427 sec   (1219 perm/sec)   p_kst 6.718391e-04   p_cons 8.328000e-01   p_joint 9.637931e-04

Joint ci ratio: 1.096130e-01	ci left: 6.902490e-04	ci right 7.708466e-04	k: 1277	n:1750000
Cons ci ratio: 1.327795e-03	ci left: 8.322360e-01	ci right 8.333423e-01	k: 1457382	n:1750000
KS ci ratio: 1.145149e-01	ci left: 6.308180e-04	ci right 7.079928e-04	k: 1170	n:1750000
MMP12   1750000 perm   1442 sec   (1214 perm/sec)   p_kst 6.685714e-04   p_cons 8.327897e-01   p_joint 7.297143e-04

Joint ci ratio: 1.092715e-01	ci left: 6.907482e-04	ci right 7.711366e-04	k: 1285	n:1760000
Cons ci ratio: 1.323947e-03	ci left: 8.322524e-01	ci right 8.333556e-01	k: 1465736	n:1760000
KS ci ratio: 1.142227e-01	ci left: 6.305454e-04	ci right 7.074767e-04	k: 1176	n:1760000
MMP12   1760000 perm   1457 sec   (1208 perm/sec)   p_kst 6.681818e-04   p_cons 8.328045e-01   p_joint 7.301136e-04

Joint ci ratio: 1.090175e-01	ci left: 6.901430e-04	ci right 7.702622e-04	k: 1291	n:1770000
Cons ci ratio: 1.320154e-03	ci left: 8.322642e-01	ci right 8.333641e-01	k: 1474082	n:1770000
KS ci ratio: 1.139809e-01	ci left: 6.297272e-04	ci right 7.063851e-04	k: 1181	n:1770000
MMP12   1770000 perm   1472 sec   (1203 perm/sec)   p_kst 6.672316e-04   p_cons 8.328147e-01   p_joint 7.293785e-04

Joint ci ratio: 1.087234e-01	ci left: 6.900913e-04	ci right 7.699746e-04	k: 1298	n:1780000
Cons ci ratio: 1.316528e-03	ci left: 8.322471e-01	ci right 8.333440e-01	k: 1482377	n:1780000
KS ci ratio: 1.136449e-01	ci left: 6.300101e-04	ci right 7.064611e-04	k: 1188	n:1780000
MMP12   1780000 perm   1486 sec   (1197 perm/sec)   p_kst 6.674157e-04   p_cons 8.327961e-01   p_joint 7.292135e-04

Joint ci ratio: 1.083486e-01	ci left: 6.911275e-04	ci right 7.708374e-04	k: 1307	n:1790000
Cons ci ratio: 1.312811e-03	ci left: 8.322559e-01	ci right 8.333497e-01	k: 1490718	n:1790000
KS ci ratio: 1.132171e-01	ci left: 6.313758e-04	ci right 7.076849e-04	k: 1197	n:1790000
MMP12   1790000 perm   1501 sec   (1192 perm/sec)   p_kst 6.687151e-04   p_cons 8.328034e-01   p_joint 7.301676e-04

Joint ci ratio: 1.078140e-01	ci left: 6.943149e-04	ci right 7.739722e-04	k: 1320	n:1800000
Cons ci ratio: 1.309295e-03	ci left: 8.322285e-01	ci right 8.333194e-01	k: 1498994	n:1800000
KS ci ratio: 1.126076e-01	ci left: 6.348865e-04	ci right 7.111793e-04	k: 1210	n:1800000
MMP12   1800000 perm   1516 sec   (1187 perm/sec)   p_kst 6.722222e-04   p_cons 8.327744e-01   p_joint 7.333333e-04

Joint ci ratio: 1.075295e-01	ci left: 6.942422e-04	ci right 7.736677e-04	k: 1327	n:1810000
Cons ci ratio: 1.305844e-03	ci left: 8.321936e-01	ci right 8.332816e-01	k: 1507256	n:1810000
KS ci ratio: 1.123297e-01	ci left: 6.346005e-04	ci right 7.106583e-04	k: 1216	n:1810000
MMP12   1810000 perm   1531 sec   (1182 perm/sec)   p_kst 6.718232e-04   p_cons 8.327381e-01   p_joint 7.331492e-04

Joint ci ratio: 1.070068e-01	ci left: 6.973789e-04	ci right 7.767511e-04	k: 1340	n:1820000
Cons ci ratio: 1.302286e-03	ci left: 8.321877e-01	ci right 8.332727e-01	k: 1515570	n:1820000
KS ci ratio: 1.117343e-01	ci left: 6.380564e-04	ci right 7.140965e-04	k: 1229	n:1820000
MMP12   1820000 perm   1546 sec   (1177 perm/sec)   p_kst 6.752747e-04   p_cons 8.327308e-01   p_joint 7.362637e-04

Joint ci ratio: 1.067683e-01	ci left: 6.967592e-04	ci right 7.758729e-04	k: 1346	n:1830000
Cons ci ratio: 1.298685e-03	ci left: 8.321973e-01	ci right 8.332793e-01	k: 1523912	n:1830000
KS ci ratio: 1.114628e-01	ci left: 6.377569e-04	ci right 7.135645e-04	k: 1235	n:1830000
MMP12   1830000 perm   1561 sec   (1172 perm/sec)   p_kst 6.748634e-04   p_cons 8.327388e-01   p_joint 7.355191e-04

Joint ci ratio: 1.065313e-01	ci left: 6.961463e-04	ci right 7.750040e-04	k: 1352	n:1840000
Cons ci ratio: 1.295231e-03	ci left: 8.321817e-01	ci right 8.332608e-01	k: 1532208	n:1840000
KS ci ratio: 1.112381e-01	ci left: 6.369325e-04	ci right 7.124795e-04	k: 1240	n:1840000
MMP12   1840000 perm   1576 sec   (1167 perm/sec)   p_kst 6.739130e-04   p_cons 8.327217e-01   p_joint 7.347826e-04

Joint ci ratio: 1.061397e-01	ci left: 6.976450e-04	ci right 7.763639e-04	k: 1362	n:1850000
Cons ci ratio: 1.291701e-03	ci left: 8.321884e-01	ci right 8.332646e-01	k: 1540545	n:1850000
KS ci ratio: 1.109257e-01	ci left: 6.371683e-04	ci right 7.125171e-04	k: 1247	n:1850000
MMP12   1850000 perm   1592 sec   (1162 perm/sec)   p_kst 6.740541e-04   p_cons 8.327270e-01   p_joint 7.362162e-04

Joint ci ratio: 1.058296e-01	ci left: 6.980813e-04	ci right 7.766049e-04	k: 1370	n:1860000
Cons ci ratio: 1.288195e-03	ci left: 8.321962e-01	ci right 8.332694e-01	k: 1548884	n:1860000
KS ci ratio: 1.107042e-01	ci left: 6.363563e-04	ci right 7.114490e-04	k: 1252	n:1860000
MMP12   1860000 perm   1607 sec   (1157 perm/sec)   p_kst 6.731183e-04   p_cons 8.327333e-01   p_joint 7.365591e-04

Joint ci ratio: 9.189202e-02	ci left: 9.275096e-04	ci right 1.017363e-03	k: 1817	n:1870000
Cons ci ratio: 1.284806e-03	ci left: 8.321846e-01	ci right 8.332550e-01	k: 1557187	n:1870000
KS ci ratio: 1.102213e-01	ci left: 6.386732e-04	ci right 7.136892e-04	k: 1263	n:1870000
MMP12   1870000 perm   1623 sec   (1152 perm/sec)   p_kst 6.754011e-04   p_cons 8.327203e-01   p_joint 9.716578e-04

Joint ci ratio: 9.179124e-02	ci left: 9.246548e-04	ci right 1.014128e-03	k: 1821	n:1880000
Cons ci ratio: 1.281368e-03	ci left: 8.321897e-01	ci right 8.332572e-01	k: 1565521	n:1880000
KS ci ratio: 1.100909e-01	ci left: 6.368278e-04	ci right 7.115327e-04	k: 1266	n:1880000
MMP12   1880000 perm   1638 sec   (1148 perm/sec)   p_kst 6.734043e-04   p_cons 8.327239e-01   p_joint 9.686170e-04

Joint ci ratio: 9.151537e-02	ci left: 9.254492e-04	ci right 1.014716e-03	k: 1832	n:1890000
Cons ci ratio: 1.278020e-03	ci left: 8.321809e-01	ci right 8.332456e-01	k: 1573829	n:1890000
KS ci ratio: 1.097880e-01	ci left: 6.370602e-04	ci right 7.115735e-04	k: 1273	n:1890000
MMP12   1890000 perm   1653 sec   (1143 perm/sec)   p_kst 6.735450e-04   p_cons 8.327138e-01   p_joint 9.693122e-04

Joint ci ratio: 9.136604e-02	ci left: 9.236640e-04	ci right 1.012605e-03	k: 1838	n:1900000
Cons ci ratio: 1.274619e-03	ci left: 8.321896e-01	ci right 8.332515e-01	k: 1582170	n:1900000
KS ci ratio: 1.097020e-01	ci left: 6.347309e-04	ci right 7.089100e-04	k: 1275	n:1900000
MMP12   1900000 perm   1669 sec   (1138 perm/sec)   p_kst 6.710526e-04   p_cons 8.327211e-01   p_joint 9.673684e-04

Joint ci ratio: 9.119271e-02	ci left: 9.224093e-04	ci right 1.011052e-03	k: 1845	n:1910000
Cons ci ratio: 1.271305e-03	ci left: 8.321851e-01	ci right 8.332442e-01	k: 1590486	n:1910000
KS ci ratio: 1.095306e-01	ci left: 6.334445e-04	ci right 7.073501e-04	k: 1279	n:1910000
MMP12   1910000 perm   1685 sec   (1134 perm/sec)   p_kst 6.696335e-04   p_cons 8.327152e-01   p_joint 9.659686e-04

Joint ci ratio: 9.087322e-02	ci left: 9.242218e-04	ci right 1.012711e-03	k: 1858	n:1920000
Cons ci ratio: 1.267969e-03	ci left: 8.321911e-01	ci right 8.332475e-01	k: 1598822	n:1920000
KS ci ratio: 1.092323e-01	ci left: 6.336915e-04	ci right 7.074115e-04	k: 1286	n:1920000
MMP12   1920000 perm   1700 sec   (1129 perm/sec)   p_kst 6.697917e-04   p_cons 8.327198e-01   p_joint 9.677083e-04

Joint ci ratio: 9.077574e-02	ci left: 9.214585e-04	ci right 1.009584e-03	k: 1862	n:1930000
Cons ci ratio: 1.264748e-03	ci left: 8.321773e-01	ci right 8.332310e-01	k: 1607120	n:1930000
KS ci ratio: 1.091477e-01	ci left: 6.314160e-04	ci right 7.048107e-04	k: 1288	n:1930000
MMP12   1930000 perm   1716 sec   (1125 perm/sec)   p_kst 6.673575e-04   p_cons 8.327047e-01   p_joint 9.647668e-04

Joint ci ratio: 9.055729e-02	ci left: 9.212427e-04	ci right 1.009124e-03	k: 1871	n:1940000
Cons ci ratio: 1.261419e-03	ci left: 8.321931e-01	ci right 8.332440e-01	k: 1615475	n:1940000
KS ci ratio: 1.089788e-01	ci left: 6.301669e-04	ci right 7.032958e-04	k: 1292	n:1940000
MMP12   1940000 perm   1732 sec   (1120 perm/sec)   p_kst 6.659794e-04   p_cons 8.327191e-01   p_joint 9.644330e-04

Joint ci ratio: 9.024440e-02	ci left: 9.230344e-04	ci right 1.010766e-03	k: 1884	n:1950000
Cons ci ratio: 1.258079e-03	ci left: 8.322170e-01	ci right 8.332651e-01	k: 1623846	n:1950000
KS ci ratio: 1.086432e-01	ci left: 6.309262e-04	ci right 7.039033e-04	k: 1300	n:1950000
MMP12   1950000 perm   1748 sec   (1116 perm/sec)   p_kst 6.666667e-04   p_cons 8.327415e-01   p_joint 9.661538e-04

Joint ci ratio: 9.010120e-02	ci left: 9.213172e-04	ci right 1.008740e-03	k: 1890	n:1960000
Cons ci ratio: 1.254795e-03	ci left: 8.322339e-01	ci right 8.332794e-01	k: 1632204	n:1960000
KS ci ratio: 1.085182e-01	ci left: 6.291962e-04	ci right 7.018842e-04	k: 1303	n:1960000
MMP12   1960000 perm   1764 sec   (1111 perm/sec)   p_kst 6.647959e-04   p_cons 8.327571e-01   p_joint 9.642857e-04

Joint ci ratio: 8.986390e-02	ci left: 9.216024e-04	ci right 1.008809e-03	k: 1900	n:1970000
Cons ci ratio: 1.251596e-03	ci left: 8.322375e-01	ci right 8.332803e-01	k: 1640536	n:1970000
KS ci ratio: 1.082694e-01	ci left: 6.289654e-04	ci right 7.014495e-04	k: 1309	n:1970000
MMP12   1970000 perm   1781 sec   (1106 perm/sec)   p_kst 6.644670e-04   p_cons 8.327594e-01   p_joint 9.644670e-04

Joint ci ratio: 8.962846e-02	ci left: 9.218850e-04	ci right 1.008878e-03	k: 1910	n:1980000
Cons ci ratio: 1.248451e-03	ci left: 8.322345e-01	ci right 8.332746e-01	k: 1648855	n:1980000
KS ci ratio: 1.079813e-01	ci left: 6.292286e-04	ci right 7.015378e-04	k: 1316	n:1980000
MMP12   1980000 perm   1797 sec   (1102 perm/sec)   p_kst 6.646465e-04   p_cons 8.327551e-01   p_joint 9.646465e-04

Joint ci ratio: 8.937158e-02	ci left: 9.226563e-04	ci right 1.009460e-03	k: 1921	n:1990000
Cons ci ratio: 1.245231e-03	ci left: 8.322536e-01	ci right 8.332911e-01	k: 1657218	n:1990000
KS ci ratio: 1.076548e-01	ci left: 6.299783e-04	ci right 7.021409e-04	k: 1324	n:1990000
MMP12   1990000 perm   1813 sec   (1097 perm/sec)   p_kst 6.653266e-04   p_cons 8.327729e-01   p_joint 9.653266e-04

Joint ci ratio: 8.923249e-02	ci left: 9.209760e-04	ci right 1.007479e-03	k: 1927	n:2000000
Cons ci ratio: 1.242207e-03	ci left: 8.322341e-01	ci right 8.332690e-01	k: 1665504	n:2000000
KS ci ratio: 1.074927e-01	ci left: 6.287746e-04	ci right 7.006840e-04	k: 1328	n:2000000
MMP12   2000000 perm   1829 sec   (1093 perm/sec)   p_kst 6.640000e-04   p_cons 8.327520e-01   p_joint 9.635000e-04

Joint ci ratio: 8.888727e-02	ci left: 9.236906e-04	ci right 1.010096e-03	k: 1942	n:2010000
Cons ci ratio: 1.239118e-03	ci left: 8.322341e-01	ci right 8.332664e-01	k: 1673829	n:2010000
KS ci ratio: 1.070106e-01	ci left: 6.314564e-04	ci right 7.033282e-04	k: 1340	n:2010000
MMP12   2010000 perm   1846 sec   (1089 perm/sec)   p_kst 6.666667e-04   p_cons 8.327507e-01   p_joint 9.661692e-04

Joint ci ratio: 8.872764e-02	ci left: 9.225062e-04	ci right 1.008638e-03	k: 1949	n:2020000
Cons ci ratio: 1.236002e-03	ci left: 8.322455e-01	ci right 8.332753e-01	k: 1682177	n:2020000
KS ci ratio: 1.067323e-01	ci left: 6.317031e-04	ci right 7.034043e-04	k: 1347	n:2020000
MMP12   2020000 perm   1862 sec   (1085 perm/sec)   p_kst 6.668317e-04   p_cons 8.327609e-01   p_joint 9.648515e-04

Joint ci ratio: 8.850100e-02	ci left: 9.227788e-04	ci right 1.008704e-03	k: 1959	n:2030000
Cons ci ratio: 1.233036e-03	ci left: 8.322283e-01	ci right 8.332555e-01	k: 1690467	n:2030000
KS ci ratio: 1.065350e-01	ci left: 6.309886e-04	ci right 7.024680e-04	k: 1352	n:2030000
MMP12   2030000 perm   1879 sec   (1080 perm/sec)   p_kst 6.660099e-04   p_cons 8.327424e-01   p_joint 9.650246e-04

Joint ci ratio: 8.832097e-02	ci left: 9.220902e-04	ci right 1.007768e-03	k: 1967	n:2040000
Cons ci ratio: 1.230076e-03	ci left: 8.322146e-01	ci right 8.332394e-01	k: 1698764	n:2040000
KS ci ratio: 1.063779e-01	ci left: 6.298041e-04	ci right 7.010375e-04	k: 1356	n:2040000
MMP12   2040000 perm   1896 sec   (1076 perm/sec)   p_kst 6.647059e-04   p_cons 8.327275e-01   p_joint 9.642157e-04

Joint ci ratio: 8.809742e-02	ci left: 9.223627e-04	ci right 1.007838e-03	k: 1977	n:2050000
Cons ci ratio: 1.227069e-03	ci left: 8.322167e-01	ci right 8.332390e-01	k: 1707093	n:2050000
KS ci ratio: 1.061436e-01	ci left: 6.295809e-04	ci right 7.006224e-04	k: 1362	n:2050000
MMP12   2050000 perm   1912 sec   (1072 perm/sec)   p_kst 6.643902e-04   p_cons 8.327283e-01   p_joint 9.643902e-04

Joint ci ratio: 8.787556e-02	ci left: 9.226328e-04	ci right 1.007906e-03	k: 1987	n:2060000
Cons ci ratio: 1.224079e-03	ci left: 8.322197e-01	ci right 8.332395e-01	k: 1715424	n:2060000
KS ci ratio: 1.058334e-01	ci left: 6.303053e-04	ci right 7.012077e-04	k: 1370	n:2060000
MMP12   2060000 perm   1929 sec   (1068 perm/sec)   p_kst 6.650485e-04   p_cons 8.327301e-01   p_joint 9.645631e-04

Joint ci ratio: 8.767733e-02	ci left: 9.224280e-04	ci right 1.007481e-03	k: 1996	n:2070000
Cons ci ratio: 1.221037e-03	ci left: 8.322397e-01	ci right 8.332570e-01	k: 1723790	n:2070000
KS ci ratio: 1.056410e-01	ci left: 6.296119e-04	ci right 7.002996e-04	k: 1375	n:2070000
MMP12   2070000 perm   1946 sec   (1064 perm/sec)   p_kst 6.642512e-04   p_cons 8.327488e-01   p_joint 9.642512e-04

Joint ci ratio: 7.462055e-02	ci left: 1.275548e-03	ci right 1.374887e-03	k: 2755	n:2080000
Cons ci ratio: 1.218162e-03	ci left: 8.322262e-01	ci right 8.332411e-01	k: 1732087	n:2080000
KS ci ratio: 1.054496e-01	ci left: 6.289253e-04	ci right 6.994001e-04	k: 1380	n:2080000
MMP12   2080000 perm   1962 sec   (1060 perm/sec)   p_kst 6.634615e-04   p_cons 8.327341e-01   p_joint 1.324519e-03

Joint ci ratio: 7.436455e-02	ci left: 1.278367e-03	ci right 1.377569e-03	k: 2774	n:2090000
Cons ci ratio: 1.215328e-03	ci left: 8.322081e-01	ci right 8.332206e-01	k: 1740374	n:2090000
KS ci ratio: 1.049943e-01	ci left: 6.315066e-04	ci right 7.019463e-04	k: 1392	n:2090000
MMP12   2090000 perm   1979 sec   (1056 perm/sec)   p_kst 6.660287e-04   p_cons 8.327148e-01   p_joint 1.327273e-03

Joint ci ratio: 7.415104e-02	ci left: 1.279757e-03	ci right 1.378769e-03	k: 2790	n:2100000
Cons ci ratio: 1.212401e-03	ci left: 8.322164e-01	ci right 8.332265e-01	k: 1748716	n:2100000
KS ci ratio: 1.047315e-01	ci left: 6.317454e-04	ci right 7.020244e-04	k: 1399	n:2100000
MMP12   2100000 perm   1996 sec   (1052 perm/sec)   p_kst 6.661905e-04   p_cons 8.327219e-01   p_joint 1.328571e-03

Joint ci ratio: 7.392618e-02	ci left: 1.281599e-03	ci right 1.380441e-03	k: 2807	n:2110000
Cons ci ratio: 1.209496e-03	ci left: 8.322242e-01	ci right 8.332318e-01	k: 1757057	n:2110000
KS ci ratio: 1.043223e-01	ci left: 6.338283e-04	ci right 7.040467e-04	k: 1410	n:2110000
MMP12   2110000 perm   2013 sec   (1048 perm/sec)   p_kst 6.682464e-04   p_cons 8.327284e-01   p_joint 1.330332e-03

Joint ci ratio: 7.371641e-02	ci left: 1.282962e-03	ci right 1.381616e-03	k: 2823	n:2120000
Cons ci ratio: 1.206794e-03	ci left: 8.321898e-01	ci right 8.331951e-01	k: 1765309	n:2120000
KS ci ratio: 1.040645e-01	ci left: 6.340544e-04	ci right 7.041137e-04	k: 1417	n:2120000
MMP12   2120000 perm   2030 sec   (1044 perm/sec)   p_kst 6.683962e-04   p_cons 8.326929e-01   p_joint 1.331604e-03

Joint ci ratio: 7.358629e-02	ci left: 1.281547e-03	ci right 1.379911e-03	k: 2833	n:2130000
Cons ci ratio: 1.203890e-03	ci left: 8.322065e-01	ci right 8.332095e-01	k: 1773669	n:2130000
KS ci ratio: 1.037721e-01	ci left: 6.347359e-04	ci right 7.046614e-04	k: 1425	n:2130000
MMP12   2130000 perm   2048 sec   (1040 perm/sec)   p_kst 6.690141e-04   p_cons 8.327085e-01   p_joint 1.330047e-03

Joint ci ratio: 7.331503e-02	ci left: 1.285191e-03	ci right 1.383456e-03	k: 2854	n:2140000
Cons ci ratio: 1.201028e-03	ci left: 8.322184e-01	ci right 8.332190e-01	k: 1782019	n:2140000
KS ci ratio: 1.032304e-01	ci left: 6.385978e-04	ci right 7.085592e-04	k: 1440	n:2140000
MMP12   2140000 perm   2065 sec   (1036 perm/sec)   p_kst 6.728972e-04   p_cons 8.327192e-01   p_joint 1.333645e-03

Joint ci ratio: 7.316146e-02	ci left: 1.284693e-03	ci right 1.382705e-03	k: 2866	n:2150000
Cons ci ratio: 1.198308e-03	ci left: 8.322018e-01	ci right 8.332001e-01	k: 1790308	n:2150000
KS ci ratio: 1.029806e-01	ci left: 6.387995e-04	ci right 7.086033e-04	k: 1447	n:2150000
MMP12   2150000 perm   2083 sec   (1032 perm/sec)   p_kst 6.730233e-04   p_cons 8.327014e-01   p_joint 1.333023e-03

Joint ci ratio: 7.304697e-02	ci left: 1.282836e-03	ci right 1.380546e-03	k: 2875	n:2160000
Cons ci ratio: 1.195638e-03	ci left: 8.321779e-01	ci right 8.331740e-01	k: 1798581	n:2160000
KS ci ratio: 1.027679e-01	ci left: 6.385484e-04	ci right 7.081720e-04	k: 1453	n:2160000
MMP12   2160000 perm   2100 sec   (1029 perm/sec)   p_kst 6.726852e-04   p_cons 8.326764e-01   p_joint 1.331019e-03

Joint ci ratio: 7.283197e-02	ci left: 1.284615e-03	ci right 1.382161e-03	k: 2892	n:2170000
Cons ci ratio: 1.192874e-03	ci left: 8.321806e-01	ci right 8.331743e-01	k: 1806911	n:2170000
KS ci ratio: 1.025565e-01	ci left: 6.382997e-04	ci right 7.077445e-04	k: 1459	n:2170000
MMP12   2170000 perm   2118 sec   (1025 perm/sec)   p_kst 6.723502e-04   p_cons 8.326779e-01   p_joint 1.332719e-03

Joint ci ratio: 7.266889e-02	ci left: 1.284577e-03	ci right 1.381893e-03	k: 2905	n:2180000
Cons ci ratio: 1.190193e-03	ci left: 8.321680e-01	ci right 8.331595e-01	k: 1815208	n:2180000
KS ci ratio: 1.023465e-01	ci left: 6.380535e-04	ci right 7.073207e-04	k: 1465	n:2180000
MMP12   2180000 perm   2135 sec   (1021 perm/sec)   p_kst 6.720183e-04   p_cons 8.326642e-01   p_joint 1.332569e-03

Joint ci ratio: 7.253178e-02	ci left: 1.283643e-03	ci right 1.380697e-03	k: 2916	n:2190000
Cons ci ratio: 1.187375e-03	ci left: 8.321922e-01	ci right 8.331813e-01	k: 1823585	n:2190000
KS ci ratio: 1.020683e-01	ci left: 6.386996e-04	ci right 7.078373e-04	k: 1473	n:2190000
MMP12   2190000 perm   2153 sec   (1017 perm/sec)   p_kst 6.726027e-04   p_cons 8.326872e-01   p_joint 1.331507e-03

Joint ci ratio: 7.228429e-02	ci left: 1.286735e-03	ci right 1.383676e-03	k: 2936	n:2200000
Cons ci ratio: 1.184690e-03	ci left: 8.321893e-01	ci right 8.331762e-01	k: 1831903	n:2200000
KS ci ratio: 1.016553e-01	ci left: 6.411121e-04	ci right 7.102132e-04	k: 1485	n:2200000
MMP12   2200000 perm   2171 sec   (1014 perm/sec)   p_kst 6.750000e-04   p_cons 8.326832e-01   p_joint 1.334545e-03

Joint ci ratio: 7.205151e-02	ci left: 1.289355e-03	ci right 1.386168e-03	k: 2955	n:2210000
Cons ci ratio: 1.182012e-03	ci left: 8.321891e-01	ci right 8.331738e-01	k: 1840227	n:2210000
KS ci ratio: 1.013149e-01	ci left: 6.426212e-04	ci right 7.116393e-04	k: 1495	n:2210000
MMP12   2210000 perm   2189 sec   (1010 perm/sec)   p_kst 6.764706e-04   p_cons 8.326819e-01   p_joint 1.337104e-03

Joint ci ratio: 7.183306e-02	ci left: 1.291509e-03	ci right 1.388177e-03	k: 2973	n:2220000
Cons ci ratio: 1.179274e-03	ci left: 8.322075e-01	ci right 8.331899e-01	k: 1848592	n:2220000
KS ci ratio: 1.009443e-01	ci left: 6.445562e-04	ci right 7.135139e-04	k: 1506	n:2220000
MMP12   2220000 perm   2206 sec   (1006 perm/sec)   p_kst 6.783784e-04   p_cons 8.326991e-01   p_joint 1.339189e-03

Joint ci ratio: 7.167658e-02	ci left: 1.291443e-03	ci right 1.387887e-03	k: 2986	n:2230000
Cons ci ratio: 1.176703e-03	ci left: 8.321906e-01	ci right 8.331709e-01	k: 1856879	n:2230000
KS ci ratio: 1.006774e-01	ci left: 6.451628e-04	ci right 7.139921e-04	k: 1514	n:2230000
MMP12   2230000 perm   2224 sec   (1003 perm/sec)   p_kst 6.789238e-04   p_cons 8.326812e-01   p_joint 1.339013e-03

Joint ci ratio: 7.141394e-02	ci left: 1.295323e-03	ci right 1.391688e-03	k: 3008	n:2240000
Cons ci ratio: 1.174201e-03	ci left: 8.321614e-01	ci right 8.331395e-01	k: 1865138	n:2240000
KS ci ratio: 1.002809e-01	ci left: 6.475052e-04	ci right 7.162963e-04	k: 1526	n:2240000
MMP12   2240000 perm   2242 sec   (999 perm/sec)   p_kst 6.812500e-04   p_cons 8.326509e-01   p_joint 1.342857e-03

Joint ci ratio: 7.128380e-02	ci left: 1.294368e-03	ci right 1.390479e-03	k: 3019	n:2250000
Cons ci ratio: 1.171618e-03	ci left: 8.321556e-01	ci right 8.331316e-01	k: 1873449	n:2250000
KS ci ratio: 1.001827e-01	ci left: 6.459272e-04	ci right 7.144796e-04	k: 1529	n:2250000
MMP12   2250000 perm   2261 sec   (995 perm/sec)   p_kst 6.795556e-04   p_cons 8.326440e-01   p_joint 1.341778e-03

Joint ci ratio: 7.117789e-02	ci left: 1.292552e-03	ci right 1.388379e-03	k: 3028	n:2260000
Cons ci ratio: 1.168875e-03	ci left: 8.321919e-01	ci right 8.331656e-01	k: 1881855	n:2260000
KS ci ratio: 9.998681e-02	ci left: 6.456576e-04	ci right 7.140395e-04	k: 1535	n:2260000
MMP12   2260000 perm   2280 sec   (991 perm/sec)   p_kst 6.792035e-04   p_cons 8.326792e-01   p_joint 1.339823e-03

Outputting figure to mutsig2_images.part000000000106/MMP12.2_1452_2260000_0.0006792_0.83268_0.0013398.png
                gene_name: MMP12
               theta_stop: 0.100 
                    nperm: 2260000 
                     p_ks: 0.00068 
        ci_ks_bounds_left: 0.00065 
       ci_ks_bounds_right: 0.00071 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.83 
                  p_joint: 0.0013 
     ci_joint_bounds_left: 0.0013 
    ci_joint_bounds_right: 0.0014 

Current progress: 83 percent done.
MN1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.106854e-02	ci left: 2.828028e-01	ci right 3.007187e-01	k: 2917	n:10000
Cons ci ratio: 3.600075e-02	ci left: 5.325743e-01	ci right 5.522010e-01	k: 5424	n:10000
KS ci ratio: 3.981388e-01	ci left: 7.692674e-03	ci right 1.160097e-02	k: 95	n:10000
MN1   10000 perm   2 sec   (5724 perm/sec)   p_kst 9.500000e-03   p_cons 5.424000e-01   p_joint 2.917000e-01

Joint ci ratio: 4.400609e-02	ci left: 2.777572e-01	ci right 2.903056e-01	k: 5680	n:20000
Cons ci ratio: 2.544268e-02	ci left: 5.357650e-01	ci right 5.496226e-01	k: 10854	n:20000
KS ci ratio: 2.884389e-01	ci left: 7.830711e-03	ci right 1.051490e-02	k: 182	n:20000
MN1   20000 perm   4 sec   (5153 perm/sec)   p_kst 9.100000e-03   p_cons 5.427000e-01   p_joint 2.840000e-01

Joint ci ratio: 3.836088e-02	ci left: 2.532215e-01	ci right 2.631587e-01	k: 7745	n:30000
Cons ci ratio: 2.080783e-02	ci left: 5.362415e-01	ci right 5.475504e-01	k: 16257	n:30000
KS ci ratio: 2.366011e-01	ci left: 7.993789e-03	ci right 1.016955e-02	k: 271	n:30000
MN1   30000 perm   6 sec   (4928 perm/sec)   p_kst 9.033333e-03   p_cons 5.419000e-01   p_joint 2.581667e-01

Joint ci ratio: 3.503678e-02	ci left: 2.341563e-01	ci right 2.425317e-01	k: 9533	n:40000
Cons ci ratio: 1.793338e-02	ci left: 5.394038e-01	ci right 5.491898e-01	k: 21772	n:40000
KS ci ratio: 2.036790e-01	ci left: 8.240160e-03	ci right 1.013212e-02	k: 366	n:40000
MN1   40000 perm   9 sec   (4607 perm/sec)   p_kst 9.150000e-03   p_cons 5.443000e-01   p_joint 2.383250e-01

Joint ci ratio: 3.175876e-02	ci left: 2.298172e-01	ci right 2.372537e-01	k: 11676	n:50000
Cons ci ratio: 1.605508e-02	ci left: 5.394618e-01	ci right 5.482131e-01	k: 27192	n:50000
KS ci ratio: 1.833396e-01	ci left: 8.228989e-03	ci right 9.908752e-03	k: 452	n:50000
MN1   50000 perm   11 sec   (4454 perm/sec)   p_kst 9.040000e-03   p_cons 5.438400e-01   p_joint 2.335200e-01

Joint ci ratio: 3.107369e-02	ci left: 2.063655e-01	ci right 2.128959e-01	k: 12577	n:60000
Cons ci ratio: 1.466879e-02	ci left: 5.394207e-01	ci right 5.474085e-01	k: 32605	n:60000
KS ci ratio: 1.690368e-01	ci left: 8.132065e-03	ci right 9.649344e-03	k: 532	n:60000
MN1   60000 perm   14 sec   (4389 perm/sec)   p_kst 8.866667e-03   p_cons 5.434167e-01   p_joint 2.096167e-01

Joint ci ratio: 3.170148e-02	ci left: 1.764219e-01	ci right 1.821190e-01	k: 12548	n:70000
Cons ci ratio: 1.359994e-02	ci left: 5.390150e-01	ci right 5.464100e-01	k: 37990	n:70000
KS ci ratio: 1.537564e-01	ci left: 8.492248e-03	ci right 9.920309e-03	k: 643	n:70000
MN1   70000 perm   16 sec   (4282 perm/sec)   p_kst 9.185714e-03   p_cons 5.427143e-01   p_joint 1.792571e-01

Joint ci ratio: 2.693672e-02	ci left: 2.064853e-01	ci right 2.121358e-01	k: 16744	n:80000
Cons ci ratio: 1.274153e-02	ci left: 5.384772e-01	ci right 5.453947e-01	k: 43355	n:80000
KS ci ratio: 1.439247e-01	ci left: 8.525897e-03	ci right 9.860061e-03	k: 734	n:80000
MN1   80000 perm   19 sec   (4237 perm/sec)   p_kst 9.175000e-03   p_cons 5.419375e-01   p_joint 2.093000e-01

Joint ci ratio: 2.236961e-02	ci left: 2.515460e-01	ci right 2.572477e-01	k: 22895	n:90000
Cons ci ratio: 1.198905e-02	ci left: 5.396608e-01	ci right 5.461809e-01	k: 48863	n:90000
KS ci ratio: 1.340568e-01	ci left: 8.779862e-03	ci right 1.005206e-02	k: 846	n:90000
MN1   90000 perm   22 sec   (4184 perm/sec)   p_kst 9.400000e-03   p_cons 5.429222e-01   p_joint 2.543889e-01

Joint ci ratio: 1.991900e-02	ci left: 2.763811e-01	ci right 2.819517e-01	k: 27916	n:100000
Cons ci ratio: 1.135578e-02	ci left: 5.406167e-01	ci right 5.468008e-01	k: 54371	n:100000
KS ci ratio: 1.269130e-01	ci left: 8.849920e-03	ci right 1.005879e-02	k: 944	n:100000
MN1   100000 perm   24 sec   (4128 perm/sec)   p_kst 9.440000e-03   p_cons 5.437100e-01   p_joint 2.791600e-01

Joint ci ratio: 1.859941e-02	ci left: 2.849715e-01	ci right 2.903306e-01	k: 31641	n:110000
Cons ci ratio: 1.083251e-02	ci left: 5.405235e-01	ci right 5.464197e-01	k: 59782	n:110000
KS ci ratio: 1.203945e-01	ci left: 8.970447e-03	ci right 1.012836e-02	k: 1049	n:110000
MN1   110000 perm   27 sec   (4074 perm/sec)   p_kst 9.536364e-03   p_cons 5.434727e-01   p_joint 2.876455e-01

Joint ci ratio: 1.780633e-02	ci left: 2.851148e-01	ci right 2.902455e-01	k: 34521	n:120000
Cons ci ratio: 1.037391e-02	ci left: 5.405265e-01	ci right 5.461714e-01	k: 65202	n:120000
KS ci ratio: 1.157009e-01	ci left: 8.926493e-03	ci right 1.003074e-02	k: 1136	n:120000
MN1   120000 perm   30 sec   (4020 perm/sec)   p_kst 9.466667e-03   p_cons 5.433500e-01   p_joint 2.876750e-01

Joint ci ratio: 1.634181e-02	ci left: 3.043013e-01	ci right 3.093227e-01	k: 39885	n:130000
Cons ci ratio: 9.967327e-03	ci left: 5.406182e-01	ci right 5.460414e-01	k: 70633	n:130000
KS ci ratio: 1.105183e-01	ci left: 9.054619e-03	ci right 1.012127e-02	k: 1245	n:130000
MN1   130000 perm   33 sec   (3965 perm/sec)   p_kst 9.576923e-03   p_cons 5.433308e-01   p_joint 3.068077e-01

Joint ci ratio: 1.651500e-02	ci left: 2.845743e-01	ci right 2.893203e-01	k: 40172	n:140000
Cons ci ratio: 9.603009e-03	ci left: 5.408078e-01	ci right 5.460333e-01	k: 76079	n:140000
KS ci ratio: 1.068543e-01	ci left: 9.012387e-03	ci right 1.003665e-02	k: 1332	n:140000
MN1   140000 perm   36 sec   (3911 perm/sec)   p_kst 9.514286e-03   p_cons 5.434214e-01   p_joint 2.869429e-01

Joint ci ratio: 1.539857e-02	ci left: 2.993644e-01	ci right 3.040166e-01	k: 45253	n:150000
Cons ci ratio: 9.294633e-03	ci left: 5.399747e-01	ci right 5.450236e-01	k: 81375	n:150000
KS ci ratio: 1.033120e-01	ci left: 9.015267e-03	ci right 1.000383e-02	k: 1425	n:150000
MN1   150000 perm   39 sec   (3860 perm/sec)   p_kst 9.500000e-03   p_cons 5.425000e-01   p_joint 3.016867e-01

Joint ci ratio: 1.491092e-02	ci left: 2.994016e-01	ci right 3.039056e-01	k: 48264	n:160000
Cons ci ratio: 9.004029e-03	ci left: 5.398049e-01	ci right 5.446935e-01	k: 86760	n:160000
KS ci ratio: 9.986803e-02	ci left: 9.060945e-03	ci right 1.001945e-02	k: 1525	n:160000
MN1   160000 perm   42 sec   (3809 perm/sec)   p_kst 9.531250e-03   p_cons 5.422500e-01   p_joint 3.016500e-01

Outputting figure to mutsig2_images.part000000000106/MN1.2_3971_160000_0.0095312_0.54225_0.30165.png
                gene_name: MN1
               theta_stop: 0.100 
                    nperm: 160000 
                     p_ks: 0.0095 
        ci_ks_bounds_left: 0.0091 
       ci_ks_bounds_right: 0.010 
                   p_cons: 0.54 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.54 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.30 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000106
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 106 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1652>
Subject: Job 8704274: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1652>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000107> was used as the working directory.
Started at Thu Nov 15 19:34:48 2012
Results reported at Thu Nov 15 19:37:12 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000107.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000107.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 107  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000107.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    166.90 sec.
    Max Memory :      5877 MB
    Max Swap   :      8432 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
107
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 107
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 107: processing genes 9590 - 9680
Calculating significance of each gene.
Using projection method.
9590	MOG	1
9591	MOGAT1	1
9592	MOGAT2	1
9593	MOGAT3	1
9594	MOGS	1
9595	MON1A	1
9596	MON1B	1
9597	MON2	1
9598	MORC1	1
9599	MORC2	1
9600	MORC3	1
9601	MORC4	1.088270e-01
9602	MORF4	5.475541e-02
9603	MORF4L1	1
9604	MORF4L2	2.402315e-03
9605	MORN1	1.664201e-01
9606	MORN3	1
9607	MORN4	1
9608	MORN5	1
9609	MOS	1
9610	MOSC1	1
9611	MOSC2	1
9612	MOSPD1	1
9613	MOSPD2	1
9614	MOSPD3	1
In gene MOV10 the following bins exceed PROBCAP:
    THCA-EM-A3O8-TP	categ 6	N = 3020    n = 1	mu =   6.74e-08
9615	MOV10	3.532644e-02
9616	MOV10L1	4.147546e-01
9617	MOXD1	1
9618	MPDU1	1
9619	MPDZ	6.162167e-02
9620	MPEG1	1
9621	MPG	1
9622	MPHOSPH10	1
9623	MPHOSPH6	1
9624	MPHOSPH8	1.508248e-01
9625	MPHOSPH9	1
9626	MPI	1
9627	MPL	1
9628	MPND	1
In gene MPO the following bins exceed PROBCAP:
    THCA-EM-A2CL-TP	categ 6	N = 2216    n = 1	mu =   3.35e-08
9629	MPO	7.147310e-02
9630	MPP1	1
9631	MPP2	1.712896e-01
9632	MPP3	1
9633	MPP4	1
9634	MPP5	1
9635	MPP6	2.242041e-01
9636	MPP7	1
9637	MPPE1	1
9638	MPPED1	6.849942e-02
9639	MPPED2	1
9640	MPRIP	1
9641	MPST	1
9642	MPV17	1
9643	MPV17L	2.367422e-02
9644	MPV17L2	1
In gene MPZ the following bins exceed PROBCAP:
    THCA-EL-A3CW-TP	categ 6	N = 700     n = 1	mu =   1.02e-07
9645	MPZ	3.168178e-02
9646	MPZL1	1
9647	MPZL2	1
9648	MPZL3	1
9649	MR1	1
9650	MRAP	1
9651	MRAP2	4.669629e-02
9652	MRAS	1
9653	MRC2	1
9654	MRE11A	1
9655	MREG	1
9656	MRFAP1	1
9657	MRFAP1L1	3.738193e-02
9658	MRGPRD	1
9659	MRGPRE	1
9660	MRGPRF	1
9661	MRGPRX1	1
9662	MRGPRX2	1
9663	MRGPRX3	1
9664	MRGPRX4	3.613679e-02
9665	MRI1	1
9666	MRM1	1
9667	MRO	1
9668	MRP63	1
9669	MRPL1	1
9670	MRPL10	3.326046e-02
9671	MRPL11	1
9672	MRPL12	1
9673	MRPL13	1
9674	MRPL14	1
9675	MRPL15	1
9676	MRPL16	1.024837e-01
9677	MRPL17	1
9678	MRPL18	1
9679	MRPL19	1
9680	MRPL2	1
Done

Running MutSig 2:
Scatter job 107: processing genes 9590 - 9680
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MORF4L2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.541488e-03	ci left: 9.900531e-01	ci right 9.936515e-01	k: 9920	n:10000
Cons ci ratio: 3.143295e-02	ci left: 5.989536e-01	ci right 6.181831e-01	k: 6086	n:10000
KS ci ratio: 3.553197e-02	ci left: 5.390841e-01	ci right 5.586874e-01	k: 5489	n:10000
MORF4L2   10000 perm   2 sec   (6287 perm/sec)   p_kst 5.489000e-01   p_cons 6.086000e-01   p_joint 9.920000e-01

Outputting figure to mutsig2_images.part000000000107/MORF4L2.2_871_10000_0.5489_0.6086_0.992.png
                gene_name: MORF4L2
               theta_stop: 0.036 
                    nperm: 10000 
                     p_ks: 0.55 
        ci_ks_bounds_left: 0.54 
       ci_ks_bounds_right: 0.56 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 33 percent done.
MOV10
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.271458e-02	ci left: 5.796832e-01	ci right 5.990647e-01	k: 5894	n:10000
KS ci ratio: 2.005282e-02	ci left: 7.845188e-01	ci right 8.005105e-01	k: 7926	n:10000
MOV10   10000 perm   2 sec   (5656 perm/sec)   p_kst 7.926000e-01   p_cons 5.894000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000107/MOV10.2_3092_10000_0.7926_0.5894_1.png
                gene_name: MOV10
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.59 
      ci_cons_bounds_left: 0.58 
     ci_cons_bounds_right: 0.60 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
MPDZ
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.910384e-01	ci left: 3.652992e-02	ci right 4.434069e-02	k: 403	n:10000
Cons ci ratio: 2.571973e-01	ci left: 1.977670e-02	ci right 2.570584e-02	k: 226	n:10000
KS ci ratio: 2.434149e-02	ci left: 7.128025e-01	ci right 7.304682e-01	k: 7217	n:10000
MPDZ   10000 perm   2 sec   (4366 perm/sec)   p_kst 7.217000e-01   p_cons 2.260000e-02   p_joint 4.030000e-02

Joint ci ratio: 1.747179e-01	ci left: 2.240180e-02	ci right 2.673793e-02	k: 490	n:20000
Cons ci ratio: 1.883388e-01	ci left: 1.920075e-02	ci right 2.324013e-02	k: 423	n:20000
KS ci ratio: 1.713956e-02	ci left: 7.171434e-01	ci right 7.295916e-01	k: 14468	n:20000
MPDZ   20000 perm   5 sec   (3857 perm/sec)   p_kst 7.234000e-01   p_cons 2.115000e-02   p_joint 2.450000e-02

Joint ci ratio: 1.140796e-01	ci left: 3.570254e-02	ci right 4.005421e-02	k: 1135	n:30000
Cons ci ratio: 1.175657e-01	ci left: 3.362884e-02	ci right 3.786168e-02	k: 1071	n:30000
KS ci ratio: 1.395952e-02	ci left: 7.193057e-01	ci right 7.294509e-01	k: 21732	n:30000
MPDZ   30000 perm   8 sec   (3751 perm/sec)   p_kst 7.244000e-01   p_cons 3.570000e-02   p_joint 3.783333e-02

Joint ci ratio: 9.971205e-02	ci left: 3.534213e-02	ci right 3.907544e-02	k: 1487	n:40000
Cons ci ratio: 1.016801e-01	ci left: 3.400054e-02	ci right 3.766724e-02	k: 1432	n:40000
KS ci ratio: 1.211204e-02	ci left: 7.192390e-01	ci right 7.280285e-01	k: 28946	n:40000
MPDZ   40000 perm   11 sec   (3566 perm/sec)   p_kst 7.236500e-01   p_cons 3.580000e-02   p_joint 3.717500e-02

Joint ci ratio: 8.165639e-02	ci left: 4.225803e-02	ci right 4.587514e-02	k: 2202	n:50000
Cons ci ratio: 9.063776e-02	ci left: 3.442323e-02	ci right 3.771091e-02	k: 1802	n:50000
KS ci ratio: 1.083905e-02	ci left: 7.194964e-01	ci right 7.273576e-01	k: 36172	n:50000
MPDZ   50000 perm   14 sec   (3553 perm/sec)   p_kst 7.234400e-01   p_cons 3.604000e-02   p_joint 4.404000e-02

Outputting figure to mutsig2_images.part000000000107/MPDZ.2_6306_50000_0.72344_0.03604_0.04404.png
                gene_name: MPDZ
               theta_stop: 0.091 
                    nperm: 50000 
                     p_ks: 0.72 
        ci_ks_bounds_left: 0.72 
       ci_ks_bounds_right: 0.73 
                   p_cons: 0.036 
      ci_cons_bounds_left: 0.034 
     ci_cons_bounds_right: 0.038 
                  p_joint: 0.044 
     ci_joint_bounds_left: 0.042 
    ci_joint_bounds_right: 0.046 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000107
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 107 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1651>
Subject: Job 8704276: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1651>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000108> was used as the working directory.
Started at Thu Nov 15 19:34:48 2012
Results reported at Thu Nov 15 19:37:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000108.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000108.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 108  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000108.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    146.97 sec.
    Max Memory :      5459 MB
    Max Swap   :      8246 MB

    Max Processes  :         7
    Max Threads    :        57

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
108
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 108
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

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Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 108: processing genes 9681 - 9770
Calculating significance of each gene.
Using projection method.
9681	MRPL20	1
9682	MRPL21	1
9683	MRPL22	1
9684	MRPL23	1
9685	MRPL24	1
9686	MRPL27	1
9687	MRPL28	1
9688	MRPL3	1
9689	MRPL30	1
9690	MRPL32	1
9691	MRPL33	1
9692	MRPL34	1
9693	MRPL35	1
9694	MRPL36	1
9695	MRPL37	1
9696	MRPL38	1.354020e-01
9697	MRPL39	1
9698	MRPL4	1
9699	MRPL40	1
9700	MRPL41	9.405271e-03
9701	MRPL42	1
9702	MRPL43	1
9703	MRPL44	1
9704	MRPL45	1
9705	MRPL46	1
9706	MRPL47	1
9707	MRPL48	1
9708	MRPL49	1
9709	MRPL50	1
9710	MRPL51	1
9711	MRPL52	1
9712	MRPL53	1
9713	MRPL54	1
9714	MRPL55	1
9715	MRPL9	1
9716	MRPS10	1
9717	MRPS11	1
9718	MRPS12	1
9719	MRPS14	1
9720	MRPS15	1
9721	MRPS16	1
9722	MRPS17	1
9723	MRPS18A	1
9724	MRPS18B	1
9725	MRPS18C	1
9726	MRPS2	1
9727	MRPS21	1
9728	MRPS22	1
9729	MRPS23	1
9730	MRPS24	1
9731	MRPS25	1
9732	MRPS26	1
9733	MRPS27	1
9734	MRPS28	1
9735	MRPS30	1
9736	MRPS31	4.208583e-02
9737	MRPS33	1
9738	MRPS34	1
9739	MRPS35	1
9740	MRPS36	1
9741	MRPS5	1
9742	MRPS6	1
9743	MRPS7	1
9744	MRPS9	1
9745	MRRF	1
9746	MRS2	8.044825e-02
9747	MRTO4	1
9748	MRVI1	1
9749	MS4A1	1
9750	MS4A10	1
9751	MS4A12	1
9752	MS4A13	1
9753	MS4A14	1
9754	MS4A15	1
In gene MS4A2 the following bins exceed PROBCAP:
    THCA-H2-A26U-TP	categ 6	N = 814     n = 1	mu =   9.95e-08
9755	MS4A2	3.297779e-02
9756	MS4A3	1
9757	MS4A4A	1
9758	MS4A5	1
9759	MS4A6A	1
9760	MS4A6E	1
9761	MS4A7	1
9762	MS4A8B	1
9763	MSC	1
9764	MSGN1	1
9765	MSH2	2.326839e-01
9766	MSH3	1
9767	MSH4	1
9768	MSH5	1
9769	MSH6	1
In gene MSI1 the following bins exceed PROBCAP:
    THCA-BJ-A192-TP	categ 6	N = 681     n = 1	mu =   6.92e-08
9770	MSI1	1.294979e-04
Done

Running MutSig 2:
Scatter job 108: processing genes 9681 - 9770
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MSI1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.211988e-02	ci left: 3.517769e-01	ci right 3.707040e-01	k: 3612	n:10000
Cons ci ratio: 3.210328e-02	ci left: 5.888147e-01	ci right 6.081279e-01	k: 5985	n:10000
KS ci ratio: 6.907414e-02	ci left: 2.351136e-01	ci right 2.520360e-01	k: 2435	n:10000
MSI1   10000 perm   3 sec   (3525 perm/sec)   p_kst 2.435000e-01   p_cons 5.985000e-01   p_joint 3.612000e-01

Outputting figure to mutsig2_images.part000000000108/MSI1.3_1145_10000_0.2435_0.5985_0.3612.png
                gene_name: MSI1
               theta_stop: 0.069 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.24 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 0.36 
     ci_joint_bounds_left: 0.35 
    ci_joint_bounds_right: 0.37 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000108
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 108 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1711>
Subject: Job 8704277: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1711>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000109> was used as the working directory.
Started at Thu Nov 15 19:34:48 2012
Results reported at Thu Nov 15 19:37:37 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000109.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000109.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 109  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000109.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    193.14 sec.
    Max Memory :      5840 MB
    Max Swap   :      8403 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
109
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 109
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 109: processing genes 9771 - 9861
Calculating significance of each gene.
Using projection method.
9771	MSI2	8.689995e-02
9772	MSL1	1
9773	MSL2	1
9774	MSL3	1
9775	MSL3L2	1
9776	MSLN	1
9777	MSLNL	6.973473e-03
9778	MSMB	1
9779	MSMP	1
9780	MSN	1
9781	MSR1	1
9782	MSRA	1
9783	MSRB2	1
9784	MSRB3	1
9785	MST1	1.570588e-01
9786	MST1R	1
9787	MST4	6.417238e-02
9788	MSTN	1
9789	MSTO1	1
In gene MSX1 the following bins exceed PROBCAP:
    THCA-BJ-A0Z5-TP	categ 6	N = 601     n = 1	mu =   3.33e-08
9790	MSX1	1.016232e-02
9791	MSX2	1
9792	MT1A	1
9793	MT1B	1
9794	MT1E	1
9795	MT1F	1
9796	MT1G	1
9797	MT1H	1
9798	MT1M	1
9799	MT1X	1
9800	MT2A	1
9801	MT3	1
9802	MT4	1
9803	MTA1	1
9804	MTA2	1
9805	MTA3	1
9806	MTAP	1
9807	MTBP	2.715685e-01
9808	MTCH1	1
9809	MTCH2	1
9810	MTCP1	1
9811	MTCP1NB	1
9812	MTDH	1
9813	MTERF	1
9814	MTERFD1	1
9815	MTERFD2	1
9816	MTERFD3	1
9817	MTF1	1
9818	MTF2	1
9819	MTFMT	1
9820	MTFR1	1
9821	MTG1	1
9822	MTHFD1	8.175387e-02
9823	MTHFD1L	3.256306e-01
9824	MTHFD2	1
9825	MTHFD2L	3.833519e-02
In gene MTHFR the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 1982    n = 1	mu =   2.06e-07
9826	MTHFR	4.469086e-02
9827	MTHFS	1
9828	MTHFSD	1
9829	MTIF2	1
9830	MTIF3	1
9831	MTL5	1
9832	MTM1	7.981840e-02
9833	MTMR1	1
9834	MTMR10	1
9835	MTMR11	2.462853e-01
In gene MTMR12 the following bins exceed PROBCAP:
    THCA-DJ-A2PN-TP	categ 5	N = 2231    n = 1	mu =   1.05e-07
9836	MTMR12	5.884495e-03
9837	MTMR14	1
9838	MTMR15	1
9839	MTMR2	1
9840	MTMR3	2.394397e-01
9841	MTMR4	1
9842	MTMR6	1
9843	MTMR7	1
In gene MTMR8 the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 2170    n = 1	mu =   2.02e-07
9844	MTMR8	2.046423e-01
9845	MTMR9	1
9846	MTNR1A	1
9847	MTNR1B	1
9848	MTO1	1.385716e-01
9849	MTOR	1
9850	MTP18	1
9851	MTPAP	7.120869e-02
9852	MTPN	1
9853	MTR	2.733768e-01
9854	MTRF1	1
9855	MTRF1L	1
9856	MTRR	1
9857	MTSS1	1
9858	MTSS1L	1.819956e-01
9859	MTTP	3.506423e-02
9860	MTUS1	1
9861	MTUS2	1
Done

Running MutSig 2:
Scatter job 109: processing genes 9771 - 9861
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MSLNL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.879415e-02	ci left: 2.365957e-01	ci right 2.535531e-01	k: 2450	n:10000
Cons ci ratio: 1.221246e-01	ci left: 8.766844e-02	ci right 9.916968e-02	k: 933	n:10000
KS ci ratio: 3.227051e-02	ci left: 5.863057e-01	ci right 6.056384e-01	k: 5960	n:10000
MSLNL   10000 perm   2 sec   (5127 perm/sec)   p_kst 5.960000e-01   p_cons 9.330000e-02   p_joint 2.450000e-01

Joint ci ratio: 4.970670e-02	ci left: 2.312688e-01	ci right 2.431077e-01	k: 4743	n:20000
Cons ci ratio: 8.694855e-02	ci left: 8.822495e-02	ci right 9.629404e-02	k: 1844	n:20000
KS ci ratio: 2.285076e-02	ci left: 5.885092e-01	ci right 6.021631e-01	k: 11907	n:20000
MSLNL   20000 perm   7 sec   (3040 perm/sec)   p_kst 5.953500e-01   p_cons 9.220000e-02   p_joint 2.371500e-01

Outputting figure to mutsig2_images.part000000000109/MSLNL.3_3226_20000_0.59535_0.0922_0.23715.png
                gene_name: MSLNL
               theta_stop: 0.087 
                    nperm: 20000 
                     p_ks: 0.60 
        ci_ks_bounds_left: 0.59 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.092 
      ci_cons_bounds_left: 0.088 
     ci_cons_bounds_right: 0.096 
                  p_joint: 0.24 
     ci_joint_bounds_left: 0.23 
    ci_joint_bounds_right: 0.24 

Current progress: 20 percent done.
MTMR12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.641806e-02	ci left: 4.065144e-01	ci right 4.259345e-01	k: 4162	n:10000
Cons ci ratio: 6.791337e-02	ci left: 2.413392e-01	ci right 2.584067e-01	k: 2498	n:10000
KS ci ratio: 6.356810e-02	ci left: 2.666610e-01	ci right 2.842700e-01	k: 2754	n:10000
MTMR12   10000 perm   2 sec   (5904 perm/sec)   p_kst 2.754000e-01   p_cons 2.498000e-01   p_joint 4.162000e-01

Outputting figure to mutsig2_images.part000000000109/MTMR12.3_2308_10000_0.2754_0.2498_0.4162.png
                gene_name: MTMR12
               theta_stop: 0.068 
                    nperm: 10000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.27 
       ci_ks_bounds_right: 0.28 
                   p_cons: 0.25 
      ci_cons_bounds_left: 0.24 
     ci_cons_bounds_right: 0.26 
                  p_joint: 0.42 
     ci_joint_bounds_left: 0.41 
    ci_joint_bounds_right: 0.43 

Current progress: 40 percent done.
MTHFD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.168237e-02	ci left: 3.556540e-01	ci right 3.746246e-01	k: 3651	n:10000
Cons ci ratio: 1.343015e-01	ci left: 7.320496e-02	ci right 8.384211e-02	k: 784	n:10000
KS ci ratio: 1.899873e-02	ci left: 8.019682e-01	ci right 8.174510e-01	k: 8098	n:10000
MTHFD1   10000 perm   2 sec   (5734 perm/sec)   p_kst 8.098000e-01   p_cons 7.840000e-02   p_joint 3.651000e-01

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 9.342632e-02	ci left: 7.710809e-02	ci right 8.471428e-02	k: 1617	n:20000
KS ci ratio: 1.330721e-02	ci left: 8.072226e-01	ci right 8.180864e-01	k: 16254	n:20000
MTHFD1   20000 perm   4 sec   (5171 perm/sec)   p_kst 8.127000e-01   p_cons 8.085000e-02   p_joint 1

Outputting figure to mutsig2_images.part000000000109/MTHFD1.2_2916_20000_0.8127_0.08085_1.png
                gene_name: MTHFD1
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.81 
        ci_ks_bounds_left: 0.81 
       ci_ks_bounds_right: 0.82 
                   p_cons: 0.081 
      ci_cons_bounds_left: 0.077 
     ci_cons_bounds_right: 0.085 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 60 percent done.
MTHFR
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.821929e-03	ci left: 9.362019e-01	ci right 9.455392e-01	k: 9410	n:10000
Cons ci ratio: 2.462034e-02	ci left: 7.081598e-01	ci right 7.259136e-01	k: 7171	n:10000
KS ci ratio: 3.126828e-02	ci left: 6.014639e-01	ci right 6.206713e-01	k: 6111	n:10000
MTHFR   10000 perm   2 sec   (6167 perm/sec)   p_kst 6.111000e-01   p_cons 7.171000e-01   p_joint 9.410000e-01

Outputting figure to mutsig2_images.part000000000109/MTHFR.2_2015_10000_0.6111_0.7171_0.941.png
                gene_name: MTHFR
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.94 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.95 

Current progress: 80 percent done.
MTTP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.231710e-02	ci left: 9.044264e-01	ci right 9.157334e-01	k: 9102	n:10000
Cons ci ratio: 1.737018e-02	ci left: 8.284934e-01	ci right 8.431104e-01	k: 8359	n:10000
KS ci ratio: 1.045236e-01	ci left: 1.168187e-01	ci right 1.298017e-01	k: 1232	n:10000
MTTP   10000 perm   2 sec   (5864 perm/sec)   p_kst 1.232000e-01   p_cons 8.359000e-01   p_joint 9.102000e-01

Joint ci ratio: 3.148789e-02	ci left: 4.296611e-01	ci right 4.434573e-01	k: 8731	n:20000
Cons ci ratio: 1.226185e-02	ci left: 8.311489e-01	ci right 8.414531e-01	k: 16727	n:20000
KS ci ratio: 7.384239e-02	ci left: 1.189210e-01	ci right 1.280888e-01	k: 2469	n:20000
MTTP   20000 perm   4 sec   (5201 perm/sec)   p_kst 1.234500e-01   p_cons 8.363500e-01   p_joint 4.365500e-01

Outputting figure to mutsig2_images.part000000000109/MTTP.2_2757_20000_0.12345_0.83635_0.43655.png
                gene_name: MTTP
               theta_stop: 0.074 
                    nperm: 20000 
                     p_ks: 0.12 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.84 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.84 
                  p_joint: 0.44 
     ci_joint_bounds_left: 0.43 
    ci_joint_bounds_right: 0.44 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000109
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 109 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1654>
Subject: Job 8704278: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1654>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000110> was used as the working directory.
Started at Thu Nov 15 19:34:48 2012
Results reported at Thu Nov 15 19:40:05 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000110.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000110.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 110  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000110.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    344.21 sec.
    Max Memory :      5912 MB
    Max Swap   :      8551 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
110
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 110
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 110: processing genes 9862 - 9951
Calculating significance of each gene.
Using projection method.
9862	MTX1	3.555818e-02
9863	MTX2	1
9864	MTX3	1
9865	MUC1	1
9866	MUC13	1
9867	MUC15	1
9868	MUC16	1
9869	MUC17	2.287994e-01
9870	MUC2	1
9871	MUC20	1
In gene MUC21 the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 1713    n = 1	mu =   2.44e-07
9872	MUC21	2.636359e-03
In gene MUC4 the following bins exceed PROBCAP:
    THCA-EM-A1CV-TP	categ 6	N = 3198    n = 1	mu =   1.03e-07
9873	MUC4	6.060235e-03
9874	MUC5B	4.591747e-01
In gene MUC6 the following bins exceed PROBCAP:
    THCA-BJ-A190-TP	categ 6	N = 5303    n = 1	mu =   1.71e-07
9875	MUC6	2.832607e-01
9876	MUC7	4.279410e-07
9877	MUCL1	1
9878	MUDENG	1
9879	MUL1	1
9880	MUM1	1
9881	MUM1L1	1
9882	MURC	1
9883	MUS81	1
9884	MUSK	2.341245e-01
9885	MUSTN1	1
9886	MUT	1
9887	MUTED	1
9888	MUTYH	1
9889	MVD	1
9890	MVK	1
9891	MVP	1
9892	MX1	7.460723e-02
9893	MX2	2.247994e-01
9894	MXD1	1
9895	MXD3	1
9896	MXD4	1
9897	MXI1	8.909612e-02
In gene MXRA5 the following bins exceed PROBCAP:
    THCA-ET-A3BP-TP	categ 5	N = 8263    n = 1	mu =   7.02e-08
9898	MXRA5	5.873856e-02
9899	MXRA7	1
9900	MXRA8	1
9901	MYADM	1
9902	MYB	1
9903	MYBBP1A	2.728786e-01
9904	MYBL1	1
9905	MYBL2	1
9906	MYBPC1	1
In gene MYBPC2 the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 2845    n = 1	mu =   2.02e-07
9907	MYBPC2	1.050457e-02
9908	MYBPC3	2.023709e-01
9909	MYBPH	1
9910	MYBPHL	1.620956e-01
9911	MYC	8.763481e-02
9912	MYCBP	1
9913	MYCBP2	7.882136e-01
9914	MYCBPAP	2.073782e-01
9915	MYCL1	1
9916	MYCN	1
9917	MYCT1	1
9918	MYD88	1
9919	MYEF2	1
9920	MYEOV	1
9921	MYEOV2	1
9922	MYF5	1
9923	MYF6	1
9924	MYH1	7.581507e-02
9925	MYH10	4.367336e-01
9926	MYH11	1
9927	MYH13	3.647834e-01
9928	MYH14	1.890353e-01
9929	MYH15	4.141799e-01
9930	MYH2	4.203496e-01
9931	MYH3	5.645340e-01
9932	MYH4	1
9933	MYH6	3.673098e-02
9934	MYH7	1.354156e-01
9935	MYH7B	6.183774e-01
9936	MYH8	1
9937	MYH9	1
9938	MYL1	1
9939	MYL10	1
9940	MYL12A	1
9941	MYL12B	1
9942	MYL2	1
9943	MYL3	1
9944	MYL4	1
9945	MYL5	1
9946	MYL6	1
9947	MYL6B	1
9948	MYL7	1
9949	MYL9	1
9950	MYLIP	1
9951	MYLK	1.296088e-01
Done

Running MutSig 2:
Scatter job 110: processing genes 9862 - 9951
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MUC16
Processing conservation and coverage...
22% 45% 68% 91% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.206990e-02	ci left: 5.893165e-01	ci right 6.086258e-01	k: 5990	n:10000
KS ci ratio: 2.974270e-02	ci left: 6.250738e-01	ci right 6.440477e-01	k: 6346	n:10000
MUC16   10000 perm   7 sec   (1382 perm/sec)   p_kst 6.346000e-01   p_cons 5.990000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000110/MUC16.12_43860_10000_0.6346_0.599_1.png
                gene_name: MUC16
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.63 
        ci_ks_bounds_left: 0.63 
       ci_ks_bounds_right: 0.64 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 8 percent done.
MUC17
Processing conservation and coverage...
73% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.344429e-02	ci left: 3.403483e-01	ci right 3.591393e-01	k: 3497	n:10000
Cons ci ratio: 1.512887e-02	ci left: 8.636592e-01	ci right 8.769242e-01	k: 8704	n:10000
KS ci ratio: 9.233604e-02	ci left: 1.456039e-01	ci right 1.597991e-01	k: 1526	n:10000
MUC17   10000 perm   3 sec   (3006 perm/sec)   p_kst 1.526000e-01   p_cons 8.704000e-01   p_joint 3.497000e-01

Outputting figure to mutsig2_images.part000000000110/MUC17.6_13534_10000_0.1526_0.8704_0.3497.png
                gene_name: MUC17
               theta_stop: 0.092 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.88 
                  p_joint: 0.35 
     ci_joint_bounds_left: 0.34 
    ci_joint_bounds_right: 0.36 

Current progress: 15 percent done.
MUC7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.075295e-01	ci left: 1.109577e-01	ci right 1.236661e-01	k: 1172	n:10000
Cons ci ratio: 1.305483e-01	ci left: 7.727681e-02	ci right 8.816773e-02	k: 826	n:10000
KS ci ratio: 5.920124e-02	ci left: 2.956866e-01	ci right 3.138273e-01	k: 3047	n:10000
MUC7   10000 perm   2 sec   (5980 perm/sec)   p_kst 3.047000e-01   p_cons 8.260000e-02   p_joint 1.172000e-01

Joint ci ratio: 6.813390e-02	ci left: 1.371405e-01	ci right 1.468638e-01	k: 2839	n:20000
Cons ci ratio: 9.364690e-02	ci left: 7.676561e-02	ci right 8.435686e-02	k: 1610	n:20000
KS ci ratio: 4.211496e-02	ci left: 2.958399e-01	ci right 3.086177e-01	k: 6044	n:20000
MUC7   20000 perm   4 sec   (5355 perm/sec)   p_kst 3.022000e-01   p_cons 8.050000e-02   p_joint 1.419500e-01

Outputting figure to mutsig2_images.part000000000110/MUC7.5_1142_20000_0.3022_0.0805_0.14195.png
                gene_name: MUC7
               theta_stop: 0.094 
                    nperm: 20000 
                     p_ks: 0.30 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.31 
                   p_cons: 0.081 
      ci_cons_bounds_left: 0.077 
     ci_cons_bounds_right: 0.084 
                  p_joint: 0.14 
     ci_joint_bounds_left: 0.14 
    ci_joint_bounds_right: 0.15 

Current progress: 23 percent done.
MUC5B
Processing conservation and coverage...
57% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.325833e-02	ci left: 8.912866e-01	ci right 9.032809e-01	k: 8974	n:10000
KS ci ratio: 3.136703e-02	ci left: 5.999577e-01	ci right 6.191784e-01	k: 6096	n:10000
MUC5B   10000 perm   4 sec   (2788 perm/sec)   p_kst 6.096000e-01   p_cons 8.974000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000110/MUC5B.4_17494_10000_0.6096_0.8974_1.png
                gene_name: MUC5B
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 31 percent done.
MUC21
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.233520e-01	ci left: 6.705543e-03	ci right 1.038936e-02	k: 84	n:10000
Cons ci ratio: 6.445550e-02	ci left: 2.612176e-01	ci right 2.787166e-01	k: 2699	n:10000
KS ci ratio: 4.772737e-01	ci left: 5.108009e-03	ci right 8.389267e-03	k: 66	n:10000
MUC21   10000 perm   2 sec   (5970 perm/sec)   p_kst 6.600000e-03   p_cons 2.699000e-01   p_joint 8.400000e-03

Joint ci ratio: 2.047293e-01	ci left: 1.615527e-02	ci right 1.988674e-02	k: 359	n:20000
Cons ci ratio: 4.545613e-02	ci left: 2.648486e-01	ci right 2.772180e-01	k: 5420	n:20000
KS ci ratio: 3.400560e-01	ci left: 5.479249e-03	ci right 7.767742e-03	k: 131	n:20000
MUC21   20000 perm   4 sec   (5383 perm/sec)   p_kst 6.550000e-03   p_cons 2.710000e-01   p_joint 1.795000e-02

Joint ci ratio: 1.212501e-01	ci left: 3.162187e-02	ci right 3.573575e-02	k: 1009	n:30000
Cons ci ratio: 3.723261e-02	ci left: 2.647501e-01	ci right 2.748279e-01	k: 8093	n:30000
KS ci ratio: 2.827322e-01	ci left: 5.467054e-03	ci right 7.297185e-03	k: 190	n:30000
MUC21   30000 perm   6 sec   (5139 perm/sec)   p_kst 6.333333e-03   p_cons 2.697667e-01   p_joint 3.363333e-02

Joint ci ratio: 1.036854e-01	ci left: 3.270842e-02	ci right 3.630956e-02	k: 1379	n:40000
Cons ci ratio: 3.219743e-02	ci left: 2.660018e-01	ci right 2.747316e-01	k: 10814	n:40000
KS ci ratio: 2.481443e-01	ci left: 5.430825e-03	ci right 6.992166e-03	k: 247	n:40000
MUC21   40000 perm   8 sec   (4984 perm/sec)   p_kst 6.175000e-03   p_cons 2.703500e-01   p_joint 3.447500e-02

Joint ci ratio: 1.188316e-01	ci left: 2.003289e-02	ci right 2.258311e-02	k: 1064	n:50000
Cons ci ratio: 2.892545e-02	ci left: 2.647384e-01	ci right 2.725285e-01	k: 13431	n:50000
KS ci ratio: 2.201680e-01	ci left: 5.606360e-03	ci right 7.011884e-03	k: 314	n:50000
MUC21   50000 perm   10 sec   (4853 perm/sec)   p_kst 6.280000e-03   p_cons 2.686200e-01   p_joint 2.128000e-02

Joint ci ratio: 1.147861e-01	ci left: 1.797116e-02	ci right 2.017570e-02	k: 1143	n:60000
Cons ci ratio: 2.633752e-02	ci left: 2.660854e-01	ci right 2.732036e-01	k: 16178	n:60000
KS ci ratio: 2.020640e-01	ci left: 5.603390e-03	ci right 6.878412e-03	k: 373	n:60000
MUC21   60000 perm   13 sec   (4740 perm/sec)   p_kst 6.216667e-03   p_cons 2.696333e-01   p_joint 1.905000e-02

Joint ci ratio: 1.132955e-01	ci left: 1.586084e-02	ci right 1.777951e-02	k: 1176	n:70000
Cons ci ratio: 2.428119e-02	ci left: 2.680086e-01	ci right 2.746104e-01	k: 18991	n:70000
KS ci ratio: 1.839887e-01	ci left: 5.849915e-03	ci right 7.048692e-03	k: 450	n:70000
MUC21   70000 perm   15 sec   (4643 perm/sec)   p_kst 6.428571e-03   p_cons 2.713000e-01   p_joint 1.680000e-02

Joint ci ratio: 1.015438e-01	ci left: 1.735808e-02	ci right 1.922708e-02	k: 1462	n:80000
Cons ci ratio: 2.268225e-02	ci left: 2.687566e-01	ci right 2.749350e-01	k: 21747	n:80000
KS ci ratio: 1.713427e-01	ci left: 5.942882e-03	ci right 7.068356e-03	k: 519	n:80000
MUC21   80000 perm   18 sec   (4564 perm/sec)   p_kst 6.487500e-03   p_cons 2.718375e-01   p_joint 1.827500e-02

Joint ci ratio: 1.053712e-01	ci left: 1.434584e-02	ci right 1.595230e-02	k: 1362	n:90000
Cons ci ratio: 2.133921e-02	ci left: 2.697812e-01	ci right 2.756113e-01	k: 24542	n:90000
KS ci ratio: 1.600360e-01	ci left: 6.092059e-03	ci right 7.162336e-03	k: 595	n:90000
MUC21   90000 perm   20 sec   (4492 perm/sec)   p_kst 6.611111e-03   p_cons 2.726889e-01   p_joint 1.513333e-02

Joint ci ratio: 1.013121e-01	ci left: 1.400218e-02	ci right 1.550616e-02	k: 1474	n:100000
Cons ci ratio: 2.023141e-02	ci left: 2.701806e-01	ci right 2.757126e-01	k: 27294	n:100000
KS ci ratio: 1.531353e-01	ci left: 6.011289e-03	ci right 7.017656e-03	k: 650	n:100000
MUC21   100000 perm   23 sec   (4420 perm/sec)   p_kst 6.500000e-03   p_cons 2.729400e-01   p_joint 1.474000e-02

Joint ci ratio: 9.850973e-02	ci left: 1.349136e-02	ci right 1.489806e-02	k: 1560	n:110000
Cons ci ratio: 1.927819e-02	ci left: 2.705500e-01	ci right 2.758256e-01	k: 30050	n:110000
KS ci ratio: 1.460191e-01	ci left: 6.033614e-03	ci right 6.992684e-03	k: 715	n:110000
MUC21   110000 perm   25 sec   (4348 perm/sec)   p_kst 6.500000e-03   p_cons 2.731818e-01   p_joint 1.418182e-02

Joint ci ratio: 8.669983e-02	ci left: 1.602327e-02	ci right 1.748355e-02	k: 2009	n:120000
Cons ci ratio: 1.843306e-02	ci left: 2.711870e-01	ci right 2.762406e-01	k: 32845	n:120000
KS ci ratio: 1.412748e-01	ci left: 5.924448e-03	ci right 6.832988e-03	k: 764	n:120000
MUC21   120000 perm   28 sec   (4277 perm/sec)   p_kst 6.366667e-03   p_cons 2.737083e-01   p_joint 1.674167e-02

Joint ci ratio: 7.920709e-02	ci left: 1.775932e-02	ci right 1.923150e-02	k: 2403	n:130000
Cons ci ratio: 1.771957e-02	ci left: 2.710704e-01	ci right 2.759243e-01	k: 35554	n:130000
KS ci ratio: 1.356296e-01	ci left: 5.951411e-03	ci right 6.824673e-03	k: 829	n:130000
MUC21   130000 perm   31 sec   (4204 perm/sec)   p_kst 6.376923e-03   p_cons 2.734923e-01   p_joint 1.848462e-02

Joint ci ratio: 6.665746e-02	ci left: 2.330296e-02	ci right 2.491683e-02	k: 3374	n:140000
Cons ci ratio: 1.707132e-02	ci left: 2.712445e-01	ci right 2.759220e-01	k: 38301	n:140000
KS ci ratio: 1.300276e-01	ci left: 6.030432e-03	ci right 6.875919e-03	k: 902	n:140000
MUC21   140000 perm   34 sec   (4135 perm/sec)   p_kst 6.442857e-03   p_cons 2.735786e-01   p_joint 2.410000e-02

Joint ci ratio: 6.231047e-02	ci left: 2.490506e-02	ci right 2.651334e-02	k: 3855	n:150000
Cons ci ratio: 1.649658e-02	ci left: 2.712253e-01	ci right 2.757434e-01	k: 41022	n:150000
KS ci ratio: 1.258479e-01	ci left: 6.022054e-03	ci right 6.837201e-03	k: 963	n:150000
MUC21   150000 perm   37 sec   (4068 perm/sec)   p_kst 6.420000e-03   p_cons 2.734800e-01   p_joint 2.570000e-02

Joint ci ratio: 7.522720e-02	ci left: 1.605934e-02	ci right 1.732076e-02	k: 2669	n:160000
Cons ci ratio: 1.522742e-02	ci left: 2.906458e-01	ci right 2.951117e-01	k: 46860	n:160000
KS ci ratio: 1.221670e-01	ci left: 6.002984e-03	ci right 6.790063e-03	k: 1022	n:160000
MUC21   160000 perm   40 sec   (3997 perm/sec)   p_kst 6.387500e-03   p_cons 2.928750e-01   p_joint 1.668125e-02

Joint ci ratio: 7.588799e-02	ci left: 1.486616e-02	ci right 1.604456e-02	k: 2626	n:170000
Cons ci ratio: 1.477147e-02	ci left: 2.907490e-01	ci right 2.950816e-01	k: 49795	n:170000
KS ci ratio: 1.182972e-01	ci left: 6.037844e-03	ci right 6.802664e-03	k: 1090	n:170000
MUC21   170000 perm   43 sec   (3932 perm/sec)   p_kst 6.411765e-03   p_cons 2.929118e-01   p_joint 1.544706e-02

Joint ci ratio: 7.391916e-02	ci left: 1.481436e-02	ci right 1.595688e-02	k: 2768	n:180000
Cons ci ratio: 1.434128e-02	ci left: 2.912140e-01	ci right 2.954260e-01	k: 52797	n:180000
KS ci ratio: 1.154265e-01	ci left: 5.999025e-03	ci right 6.739230e-03	k: 1145	n:180000
MUC21   180000 perm   47 sec   (3869 perm/sec)   p_kst 6.361111e-03   p_cons 2.933167e-01   p_joint 1.537778e-02

Joint ci ratio: 6.313827e-02	ci left: 1.925601e-02	ci right 2.051659e-02	k: 3777	n:190000
Cons ci ratio: 1.395616e-02	ci left: 2.913479e-01	ci right 2.954478e-01	k: 55745	n:190000
KS ci ratio: 1.120995e-01	ci left: 6.036118e-03	ci right 6.758013e-03	k: 1214	n:190000
MUC21   190000 perm   50 sec   (3811 perm/sec)   p_kst 6.389474e-03   p_cons 2.933947e-01   p_joint 1.987895e-02

Joint ci ratio: 6.008250e-02	ci left: 2.021348e-02	ci right 2.147047e-02	k: 4167	n:200000
Cons ci ratio: 1.360606e-02	ci left: 2.913002e-01	ci right 2.952958e-01	k: 58659	n:200000
KS ci ratio: 1.093019e-01	ci left: 6.040591e-03	ci right 6.743830e-03	k: 1277	n:200000
MUC21   200000 perm   54 sec   (3737 perm/sec)   p_kst 6.385000e-03   p_cons 2.932950e-01   p_joint 2.083500e-02

Joint ci ratio: 6.029770e-02	ci left: 1.913335e-02	ci right 2.032758e-02	k: 4142	n:210000
Cons ci ratio: 1.327221e-02	ci left: 2.915339e-01	ci right 2.954337e-01	k: 61631	n:210000
KS ci ratio: 1.067438e-01	ci left: 6.040205e-03	ci right 6.725908e-03	k: 1339	n:210000
MUC21   210000 perm   57 sec   (3662 perm/sec)   p_kst 6.376190e-03   p_cons 2.934810e-01   p_joint 1.972381e-02

Joint ci ratio: 6.013326e-02	ci left: 1.837984e-02	ci right 1.952379e-02	k: 4168	n:220000
Cons ci ratio: 1.296818e-02	ci left: 2.915432e-01	ci right 2.953532e-01	k: 64558	n:220000
KS ci ratio: 1.041333e-01	ci left: 6.066595e-03	ci right 6.737419e-03	k: 1407	n:220000
MUC21   220000 perm   61 sec   (3614 perm/sec)   p_kst 6.395455e-03   p_cons 2.934455e-01   p_joint 1.894545e-02

Joint ci ratio: 5.948629e-02	ci left: 1.797891e-02	ci right 1.908545e-02	k: 4261	n:230000
Cons ci ratio: 1.266845e-02	ci left: 2.920647e-01	ci right 2.957926e-01	k: 67603	n:230000
KS ci ratio: 1.021943e-01	ci left: 6.031549e-03	ci right 6.685333e-03	k: 1461	n:230000
MUC21   230000 perm   64 sec   (3569 perm/sec)   p_kst 6.352174e-03   p_cons 2.939261e-01   p_joint 1.852609e-02

Joint ci ratio: 5.917835e-02	ci left: 1.742256e-02	ci right 1.848912e-02	k: 4308	n:240000
Cons ci ratio: 1.239640e-02	ci left: 2.922817e-01	ci right 2.959316e-01	k: 70585	n:240000
KS ci ratio: 1.001605e-01	ci left: 6.023907e-03	ci right 6.663103e-03	k: 1521	n:240000
MUC21   240000 perm   68 sec   (3525 perm/sec)   p_kst 6.337500e-03   p_cons 2.941042e-01   p_joint 1.795000e-02

Joint ci ratio: 5.880545e-02	ci left: 1.695018e-02	ci right 1.798105e-02	k: 4365	n:250000
Cons ci ratio: 1.214116e-02	ci left: 2.924820e-01	ci right 2.960587e-01	k: 73567	n:250000
KS ci ratio: 9.846289e-02	ci left: 5.989679e-03	ci right 6.613849e-03	k: 1574	n:250000
MUC21   250000 perm   72 sec   (3480 perm/sec)   p_kst 6.296000e-03   p_cons 2.942680e-01   p_joint 1.746000e-02

Outputting figure to mutsig2_images.part000000000110/MUC21.3_1713_250000_0.006296_0.29427_0.01746.png
                gene_name: MUC21
               theta_stop: 0.098 
                    nperm: 250000 
                     p_ks: 0.0063 
        ci_ks_bounds_left: 0.0060 
       ci_ks_bounds_right: 0.0066 
                   p_cons: 0.29 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.30 
                  p_joint: 0.017 
     ci_joint_bounds_left: 0.017 
    ci_joint_bounds_right: 0.018 

Current progress: 38 percent done.
MUC4
Processing conservation and coverage...
Processing mutations... 
Skipping 3 mutations outside exons of this gene.
Fewer than 2 mutations to analyze: skipping this gene...
Current progress: 46 percent done.
MXRA5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.834631e-02	ci left: 3.018342e-01	ci right 3.200760e-01	k: 3109	n:10000
Cons ci ratio: 2.073996e-02	ci left: 7.730669e-01	ci right 7.893690e-01	k: 7813	n:10000
KS ci ratio: 1.082627e-01	ci left: 1.095910e-01	ci right 1.222338e-01	k: 1158	n:10000
MXRA5   10000 perm   3 sec   (3650 perm/sec)   p_kst 1.158000e-01   p_cons 7.813000e-01   p_joint 3.109000e-01

Joint ci ratio: 4.769166e-02	ci left: 2.464407e-01	ci right 2.585313e-01	k: 5049	n:20000
Cons ci ratio: 1.473174e-02	ci left: 7.739412e-01	ci right 7.854774e-01	k: 15595	n:20000
KS ci ratio: 7.763852e-02	ci left: 1.086438e-01	ci right 1.174690e-01	k: 2260	n:20000
MXRA5   20000 perm   6 sec   (3229 perm/sec)   p_kst 1.130000e-01   p_cons 7.797500e-01   p_joint 2.524500e-01

Outputting figure to mutsig2_images.part000000000110/MXRA5.3_8511_20000_0.113_0.77975_0.25245.png
                gene_name: MXRA5
               theta_stop: 0.078 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.79 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.25 
    ci_joint_bounds_right: 0.26 

Current progress: 54 percent done.
MYBPC2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.600619e-02	ci left: 2.020522e-01	ci right 2.181170e-01	k: 2100	n:10000
Cons ci ratio: 9.178519e-03	ci left: 9.435701e-01	ci right 9.523667e-01	k: 9481	n:10000
KS ci ratio: 1.411493e-01	ci left: 6.652534e-02	ci right 7.672591e-02	k: 715	n:10000
MYBPC2   10000 perm   2 sec   (4575 perm/sec)   p_kst 7.150000e-02   p_cons 9.481000e-01   p_joint 2.100000e-01

Joint ci ratio: 5.577657e-02	ci left: 1.924965e-01	ci right 2.035914e-01	k: 3960	n:20000
Cons ci ratio: 6.454732e-03	ci left: 9.454489e-01	ci right 9.516199e-01	k: 18972	n:20000
KS ci ratio: 9.973475e-02	ci left: 6.811311e-02	ci right 7.531201e-02	k: 1433	n:20000
MYBPC2   20000 perm   4 sec   (4454 perm/sec)   p_kst 7.165000e-02   p_cons 9.486000e-01   p_joint 1.980000e-01

Outputting figure to mutsig2_images.part000000000110/MYBPC2.3_3538_20000_0.07165_0.9486_0.198.png
                gene_name: MYBPC2
               theta_stop: 0.100 
                    nperm: 20000 
                     p_ks: 0.072 
        ci_ks_bounds_left: 0.068 
       ci_ks_bounds_right: 0.075 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.95 
     ci_cons_bounds_right: 0.95 
                  p_joint: 0.20 
     ci_joint_bounds_left: 0.19 
    ci_joint_bounds_right: 0.20 

Current progress: 62 percent done.
MYH6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.171582e-02	ci left: 3.553558e-01	ci right 3.743230e-01	k: 3648	n:10000
Cons ci ratio: 6.604575e-02	ci left: 2.518194e-01	ci right 2.691203e-01	k: 2604	n:10000
KS ci ratio: 4.325991e-02	ci left: 4.410133e-01	ci right 4.606154e-01	k: 4508	n:10000
MYH6   10000 perm   2 sec   (4730 perm/sec)   p_kst 4.508000e-01   p_cons 2.604000e-01   p_joint 3.648000e-01

Outputting figure to mutsig2_images.part000000000110/MYH6.3_5968_10000_0.4508_0.2604_0.3648.png
                gene_name: MYH6
               theta_stop: 0.066 
                    nperm: 10000 
                     p_ks: 0.45 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.46 
                   p_cons: 0.26 
      ci_cons_bounds_left: 0.25 
     ci_cons_bounds_right: 0.27 
                  p_joint: 0.36 
     ci_joint_bounds_left: 0.36 
    ci_joint_bounds_right: 0.37 

Current progress: 69 percent done.
MUC6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.737120e-02	ci left: 5.139556e-01	ci right 5.336306e-01	k: 5238	n:10000
KS ci ratio: 3.462305e-02	ci left: 5.519083e-01	ci right 5.714558e-01	k: 5617	n:10000
MUC6   10000 perm   2 sec   (4443 perm/sec)   p_kst 5.617000e-01   p_cons 5.238000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000110/MUC6.2_7452_10000_0.5617_0.5238_1.png
                gene_name: MUC6
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.56 
        ci_ks_bounds_left: 0.55 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.52 
      ci_cons_bounds_left: 0.51 
     ci_cons_bounds_right: 0.53 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 77 percent done.
MYH1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.849757e-02	ci left: 6.447840e-01	ci right 6.635261e-01	k: 6542	n:10000
Cons ci ratio: 8.133230e-02	ci left: 1.807775e-01	ci right 1.962044e-01	k: 1884	n:10000
KS ci ratio: 5.932719e-02	ci left: 2.947944e-01	ci right 3.129200e-01	k: 3038	n:10000
MYH1   10000 perm   2 sec   (4686 perm/sec)   p_kst 3.038000e-01   p_cons 1.884000e-01   p_joint 6.542000e-01

Outputting figure to mutsig2_images.part000000000110/MYH1.2_5972_10000_0.3038_0.1884_0.6542.png
                gene_name: MYH1
               theta_stop: 0.081 
                    nperm: 10000 
                     p_ks: 0.30 
        ci_ks_bounds_left: 0.29 
       ci_ks_bounds_right: 0.31 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.20 
                  p_joint: 0.65 
     ci_joint_bounds_left: 0.64 
    ci_joint_bounds_right: 0.66 

Current progress: 85 percent done.
MYH7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.784775e-03	ci left: 9.675208e-01	ci right 9.742012e-01	k: 9710	n:10000
Cons ci ratio: 1.373534e-02	ci left: 8.844205e-01	ci right 8.967510e-01	k: 8907	n:10000
KS ci ratio: 1.843563e-02	ci left: 8.112097e-01	ci right 8.264042e-01	k: 8189	n:10000
MYH7   10000 perm   2 sec   (4728 perm/sec)   p_kst 8.189000e-01   p_cons 8.907000e-01   p_joint 9.710000e-01

Outputting figure to mutsig2_images.part000000000110/MYH7.2_5960_10000_0.8189_0.8907_0.971.png
                gene_name: MYH7
               theta_stop: 0.018 
                    nperm: 10000 
                     p_ks: 0.82 
        ci_ks_bounds_left: 0.81 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.90 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.97 

Current progress: 92 percent done.
MYLK
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.830261e-02	ci left: 6.479030e-01	ci right 6.666053e-01	k: 6573	n:10000
Cons ci ratio: 1.913424e-02	ci left: 7.997350e-01	ci right 8.152855e-01	k: 8076	n:10000
KS ci ratio: 9.850717e-02	ci left: 1.299255e-01	ci right 1.434869e-01	k: 1366	n:10000
MYLK   10000 perm   2 sec   (4974 perm/sec)   p_kst 1.366000e-01   p_cons 8.076000e-01   p_joint 6.573000e-01

Outputting figure to mutsig2_images.part000000000110/MYLK.2_5869_10000_0.1366_0.8076_0.6573.png
                gene_name: MYLK
               theta_stop: 0.099 
                    nperm: 10000 
                     p_ks: 0.14 
        ci_ks_bounds_left: 0.13 
       ci_ks_bounds_right: 0.14 
                   p_cons: 0.81 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.82 
                  p_joint: 0.66 
     ci_joint_bounds_left: 0.65 
    ci_joint_bounds_right: 0.67 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000110
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 110 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1723>
Subject: Job 8704280: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1723>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000111> was used as the working directory.
Started at Thu Nov 15 19:34:48 2012
Results reported at Thu Nov 15 19:37:03 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000111.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000111.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 111  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000111.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    120.51 sec.
    Max Memory :      6002 MB
    Max Swap   :      8426 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
111
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 111
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 111: processing genes 9952 - 10042
Calculating significance of each gene.
Using projection method.
9952	MYLK2	1
9953	MYLK3	1
9954	MYLK4	1
9955	MYLPF	1
9956	MYNN	1
9957	MYO10	2.711056e-01
9958	MYO15A	1
9959	MYO16	1
9960	MYO18A	5.825799e-01
9961	MYO18B	1.141962e-01
9962	MYO19	3.552451e-01
9963	MYO1A	1
9964	MYO1B	1
9965	MYO1C	3.815527e-01
9966	MYO1D	3.722631e-01
9967	MYO1E	3.744328e-01
9968	MYO1F	1
9969	MYO1G	1
9970	MYO1H	1
9971	MYO3A	1
9972	MYO3B	1
9973	MYO5A	2.699313e-01
9974	MYO5B	1
9975	MYO5C	1.174518e-01
9976	MYO6	7.856915e-02
9977	MYO7A	4.420964e-01
9978	MYO7B	1
9979	MYO9A	6.341491e-01
9980	MYO9B	4.280452e-01
9981	MYOC	1
9982	MYOCD	1
9983	MYOD1	1
9984	MYOF	4.123958e-01
9985	MYOG	1
9986	MYOM1	1.425531e-01
9987	MYOM2	1.410137e-01
9988	MYOM3	1.413932e-01
9989	MYOT	1
9990	MYOZ1	1
9991	MYOZ2	1
9992	MYOZ3	1
9993	MYPN	1
9994	MYPOP	1
9995	MYRIP	1.811933e-01
9996	MYSM1	1
9997	MYST1	7.833634e-02
9998	MYST2	1
9999	MYST3	1
10000/18093 10000	MYST4	3.319665e-01
10001	MYT1	1
10002	MYT1L	2.699154e-01
10003	MZF1	1
10004	N4BP1	1
10005	N4BP2	3.941173e-01
10006	N4BP2L1	1
10007	N4BP2L2	1
10008	N4BP3	1
10009	N6AMT1	1
10010	N6AMT2	1
10011	NAA10	1
10012	NAA11	1
10013	NAA15	1
10014	NAA16	1
10015	NAA20	1
10016	NAA25	1
10017	NAA30	1
10018	NAA35	1
10019	NAA38	1
10020	NAA40	1.321449e-02
10021	NAA50	1
10022	NAAA	1
10023	NAALAD2	1
10024	NAALADL1	1.529742e-01
10025	NAALADL2	1
10026	NAB1	1
In gene NAB2 the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 1299    n = 1	mu =   2.33e-07
10027	NAB2	1.541541e-01
10028	NACA	1
10029	NACA2	1
10030	NACC1	1
10031	NACC2	1
10032	NADK	1.617791e-01
10033	NADSYN1	2.898154e-01
10034	NAE1	1
10035	NAF1	1
10036	NAGA	1
10037	NAGK	1
10038	NAGLU	1
10039	NAGPA	1
10040	NAGS	1
10041	NAIF1	1
10042	NALCN	5.426397e-01
Done

Running MutSig 2:
Scatter job 111: processing genes 9952 - 10042
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
MYO15A
Processing conservation and coverage...
92% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.337419e-03	ci left: 9.526301e-01	ci right 9.607012e-01	k: 9568	n:10000
Cons ci ratio: 5.311696e-02	ci left: 3.431304e-01	ci right 3.619556e-01	k: 3525	n:10000
KS ci ratio: 1.226434e-02	ci left: 9.051459e-01	ci right 9.164135e-01	k: 9109	n:10000
MYO15A   10000 perm   3 sec   (3425 perm/sec)   p_kst 9.109000e-01   p_cons 3.525000e-01   p_joint 9.568000e-01

Outputting figure to mutsig2_images.part000000000111/MYO15A.2_10849_10000_0.9109_0.3525_0.9568.png
                gene_name: MYO15A
               theta_stop: 0.053 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.96 
     ci_joint_bounds_left: 0.95 
    ci_joint_bounds_right: 0.96 

Current progress: 14 percent done.
MYO18B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.416858e-02	ci left: 8.780732e-01	ci right 8.907019e-01	k: 8845	n:10000
Cons ci ratio: 3.165769e-02	ci left: 5.955400e-01	ci right 6.147987e-01	k: 6052	n:10000
KS ci ratio: 1.789910e-02	ci left: 8.199499e-01	ci right 8.348589e-01	k: 8275	n:10000
MYO18B   10000 perm   2 sec   (4886 perm/sec)   p_kst 8.275000e-01   p_cons 6.052000e-01   p_joint 8.845000e-01

Outputting figure to mutsig2_images.part000000000111/MYO18B.2_7872_10000_0.8275_0.6052_0.8845.png
                gene_name: MYO18B
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.61 
                  p_joint: 0.88 
     ci_joint_bounds_left: 0.88 
    ci_joint_bounds_right: 0.89 

Current progress: 29 percent done.
MYO5C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.882593e-02	ci left: 8.048110e-01	ci right 8.202065e-01	k: 8126	n:10000
KS ci ratio: 2.535597e-02	ci left: 6.959529e-01	ci right 7.139275e-01	k: 7050	n:10000
MYO5C   10000 perm   2 sec   (5216 perm/sec)   p_kst 7.050000e-01   p_cons 8.126000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000111/MYO5C.2_5393_10000_0.705_0.8126_1.png
                gene_name: MYO5C
               theta_stop: 0.025 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.70 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.81 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.82 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 43 percent done.
MYO6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.541488e-03	ci left: 9.900531e-01	ci right 9.936515e-01	k: 9920	n:10000
Cons ci ratio: 4.057425e-02	ci left: 4.728623e-01	ci right 4.925478e-01	k: 4827	n:10000
KS ci ratio: 2.088549e-02	ci left: 7.706358e-01	ci right 7.870015e-01	k: 7789	n:10000
MYO6   10000 perm   2 sec   (6053 perm/sec)   p_kst 7.789000e-01   p_cons 4.827000e-01   p_joint 9.920000e-01

Outputting figure to mutsig2_images.part000000000111/MYO6.2_3994_10000_0.7789_0.4827_0.992.png
                gene_name: MYO6
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.49 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 57 percent done.
MYOM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.316878e-02	ci left: 7.323953e-01	ci right 7.496640e-01	k: 7411	n:10000
Cons ci ratio: 1.514227e-02	ci left: 8.634550e-01	ci right 8.767286e-01	k: 8702	n:10000
KS ci ratio: 4.308563e-02	ci left: 4.430089e-01	ci right 4.626186e-01	k: 4528	n:10000
MYOM1   10000 perm   2 sec   (5363 perm/sec)   p_kst 4.528000e-01   p_cons 8.702000e-01   p_joint 7.411000e-01

Outputting figure to mutsig2_images.part000000000111/MYOM1.2_5206_10000_0.4528_0.8702_0.7411.png
                gene_name: MYOM1
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.45 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.46 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.88 
                  p_joint: 0.74 
     ci_joint_bounds_left: 0.73 
    ci_joint_bounds_right: 0.75 

Current progress: 71 percent done.
MYOM2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.267076e-02	ci left: 4.477990e-01	ci right 4.674257e-01	k: 4576	n:10000
Cons ci ratio: 8.263127e-02	ci left: 1.760548e-01	ci right 1.913299e-01	k: 1836	n:10000
KS ci ratio: 5.084582e-02	ci left: 3.632113e-01	ci right 3.822629e-01	k: 3727	n:10000
MYOM2   10000 perm   2 sec   (5780 perm/sec)   p_kst 3.727000e-01   p_cons 1.836000e-01   p_joint 4.576000e-01

Outputting figure to mutsig2_images.part000000000111/MYOM2.2_4542_10000_0.3727_0.1836_0.4576.png
                gene_name: MYOM2
               theta_stop: 0.083 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.46 
     ci_joint_bounds_left: 0.45 
    ci_joint_bounds_right: 0.47 

Current progress: 86 percent done.
MYOM3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.544893e-02	ci left: 8.587584e-01	ci right 8.722279e-01	k: 8656	n:10000
Cons ci ratio: 4.375241e-02	ci left: 4.354264e-01	ci right 4.550056e-01	k: 4452	n:10000
KS ci ratio: 7.703343e-03	ci left: 9.590082e-01	ci right 9.665191e-01	k: 9629	n:10000
MYOM3   10000 perm   2 sec   (5764 perm/sec)   p_kst 9.629000e-01   p_cons 4.452000e-01   p_joint 8.656000e-01

Outputting figure to mutsig2_images.part000000000111/MYOM3.2_4458_10000_0.9629_0.4452_0.8656.png
                gene_name: MYOM3
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.96 
        ci_ks_bounds_left: 0.96 
       ci_ks_bounds_right: 0.97 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.86 
    ci_joint_bounds_right: 0.87 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000111
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 111 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1534>
Subject: Job 8704281: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1534>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000112> was used as the working directory.
Started at Thu Nov 15 19:35:02 2012
Results reported at Thu Nov 15 19:38:54 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000112.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000112.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 112  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000112.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    294.10 sec.
    Max Memory :      6067 MB
    Max Swap   :      8568 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
112
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 112
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 112: processing genes 10043 - 10132
Calculating significance of each gene.
Using projection method.
10043	NAMPT	1
10044	NANOG	1
10045	NANOS2	1
10046	NANOS3	6.755839e-02
10047	NANP	1
10048	NANS	1.533519e-01
10049	NAP1L1	3.516955e-02
10050	NAP1L2	1
10051	NAP1L3	1.840098e-01
10052	NAP1L4	4.521837e-02
10053	NAP1L5	1
10054	NAPA	1
10055	NAPB	1
10056	NAPEPLD	1
In gene NAPG the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 672     n = 1	mu =   2.41e-07
10057	NAPG	8.429423e-02
10058	NAPRT1	1
10059	NAPSA	1
10060	NARF	1
10061	NARFL	1
10062	NARG2	1
10063	NARS	1
10064	NARS2	1
10065	NASP	2.735625e-01
10066	NAT1	1
10067	NAT10	1.811103e-01
10068	NAT15	1
10069	NAT2	1
10070	NAT6	1
10071	NAT8	1
10072	NAT8B	1
10073	NAT8L	1
10074	NAT9	1
10075	NAV1	1
10076	NAV2	1
10077	NAV3	1.980870e-02
10078	NBAS	1
10079	NBEA	1
10080	NBEAL1	1
10081	NBEAL2	1.971019e-01
10082	NBL1	1
10083	NBN	1
10084	NBPF1	3.990015e-01
10085	NBPF10	1.275647e-03
10086	NBPF14	4.627533e-02
10087	NBPF15	1
10088	NBPF3	1.988639e-01
10089	NBPF7	1
10090	NBPF9	1.782114e-01
10091	NBR1	1.820108e-01
10092	NCALD	1
10093	NCAM1	1
10094	NCAM2	1
10095	NCAN	1.525512e-01
10096	NCAPD2	1
10097	NCAPD3	5.209207e-01
10098	NCAPG	1
10099	NCAPG2	3.520091e-01
10100	NCAPH	1
10101	NCAPH2	2.270065e-01
10102	NCBP1	1
10103	NCBP2	1
10104	NCCRP1	1
10105	NCDN	1
10106	NCEH1	1
10107	NCF1	1
10108	NCF2	1
10109	NCF4	1
10110	NCK1	4.603151e-03
10111	NCK2	1
10112	NCKAP1	1
10113	NCKAP1L	3.702594e-01
10114	NCKAP5	1
10115	NCKAP5L	1
10116	NCKIPSD	2.822646e-01
10117	NCL	1.053141e-01
10118	NCLN	1
10119	NCOA1	1
10120	NCOA2	1
10121	NCOA3	3.663818e-01
10122	NCOA4	1.830915e-01
10123	NCOA5	1
10124	NCOA6	1
10125	NCOA7	1
10126	NCOR1	1
10127	NCOR2	4.573002e-01
10128	NCR1	1.781605e-02
10129	NCR2	1
10130	NCR3	1
10131	NCS1	1
10132	NCSTN	1
Done

Running MutSig 2:
Scatter job 112: processing genes 10043 - 10132
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
NAV3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.456068e-02	ci left: 8.722429e-01	ci right 8.851355e-01	k: 8788	n:10000
KS ci ratio: 2.835287e-02	ci left: 6.470981e-01	ci right 6.658107e-01	k: 6565	n:10000
NAV3   10000 perm   3 sec   (3635 perm/sec)   p_kst 6.565000e-01   p_cons 8.788000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000112/NAV3.4_7248_10000_0.6565_0.8788_1.png
                gene_name: NAV3
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.66 
        ci_ks_bounds_left: 0.65 
       ci_ks_bounds_right: 0.67 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.89 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 20 percent done.
NBPF10
Processing conservation and coverage...
90% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.006502e-02	ci left: 7.843160e-01	ci right 8.003134e-01	k: 7924	n:10000
Cons ci ratio: 5.061829e-02	ci left: 3.653000e-01	ci right 3.843730e-01	k: 3748	n:10000
KS ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
NBPF10   10000 perm   4 sec   (2794 perm/sec)   p_kst 1   p_cons 3.748000e-01   p_joint 7.924000e-01

Outputting figure to mutsig2_images.part000000000112/NBPF10.4_10996_10000_1_0.3748_0.7924.png
                gene_name: NBPF10
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 1 
        ci_ks_bounds_left: 1.00 
       ci_ks_bounds_right: 1 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.37 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.79 
     ci_joint_bounds_left: 0.78 
    ci_joint_bounds_right: 0.80 

Current progress: 40 percent done.
NBEAL2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.301240e-02	ci left: 8.947738e-01	ci right 9.065916e-01	k: 9008	n:10000
Cons ci ratio: 1.095686e-02	ci left: 9.223452e-01	ci right 9.326041e-01	k: 9276	n:10000
KS ci ratio: 2.197400e-02	ci left: 7.524148e-01	ci right 7.692330e-01	k: 7609	n:10000
NBEAL2   10000 perm   3 sec   (3188 perm/sec)   p_kst 7.609000e-01   p_cons 9.276000e-01   p_joint 9.008000e-01

Outputting figure to mutsig2_images.part000000000112/NBEAL2.2_8481_10000_0.7609_0.9276_0.9008.png
                gene_name: NBEAL2
               theta_stop: 0.022 
                    nperm: 10000 
                     p_ks: 0.76 
        ci_ks_bounds_left: 0.75 
       ci_ks_bounds_right: 0.77 
                   p_cons: 0.93 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.93 
                  p_joint: 0.90 
     ci_joint_bounds_left: 0.89 
    ci_joint_bounds_right: 0.91 

Current progress: 60 percent done.
NBPF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.478600e-01	ci left: 2.137124e-02	ci right 2.751008e-02	k: 243	n:10000
Cons ci ratio: 1.687404e-01	ci left: 4.686539e-02	ci right 5.559839e-02	k: 511	n:10000
KS ci ratio: 1.078422e-01	ci left: 1.103719e-01	ci right 1.230523e-01	k: 1166	n:10000
NBPF1   10000 perm   2 sec   (4914 perm/sec)   p_kst 1.166000e-01   p_cons 5.110000e-02   p_joint 2.430000e-02

Joint ci ratio: 1.108454e-01	ci left: 5.557898e-02	ci right 6.215000e-02	k: 1176	n:20000
Cons ci ratio: 1.174580e-01	ci left: 4.964363e-02	ci right 5.588721e-02	k: 1054	n:20000
KS ci ratio: 7.590801e-02	ci left: 1.131663e-01	ci right 1.221451e-01	k: 2352	n:20000
NBPF1   20000 perm   5 sec   (4325 perm/sec)   p_kst 1.176000e-01   p_cons 5.270000e-02   p_joint 5.880000e-02

Joint ci ratio: 1.188948e-01	ci left: 3.288409e-02	ci right 3.707326e-02	k: 1048	n:30000
Cons ci ratio: 9.646915e-02	ci left: 4.964467e-02	ci right 5.470917e-02	k: 1564	n:30000
KS ci ratio: 6.173642e-02	ci left: 1.147974e-01	ci right 1.221434e-01	k: 3553	n:30000
NBPF1   30000 perm   7 sec   (4169 perm/sec)   p_kst 1.184333e-01   p_cons 5.213333e-02   p_joint 3.493333e-02

Joint ci ratio: 1.197848e-01	ci left: 2.451102e-02	ci right 2.765829e-02	k: 1042	n:40000
Cons ci ratio: 7.458196e-02	ci left: 6.218563e-02	ci right 6.702782e-02	k: 2583	n:40000
KS ci ratio: 5.334211e-02	ci left: 1.157680e-01	ci right 1.221374e-01	k: 4757	n:40000
NBPF1   40000 perm   10 sec   (4125 perm/sec)   p_kst 1.189250e-01   p_cons 6.457500e-02   p_joint 2.605000e-02

Joint ci ratio: 1.178183e-01	ci left: 2.038244e-02	ci right 2.295351e-02	k: 1082	n:50000
Cons ci ratio: 6.679676e-02	ci left: 6.228347e-02	ci right 6.660726e-02	k: 3221	n:50000
KS ci ratio: 4.783633e-02	ci left: 1.155605e-01	ci right 1.212438e-01	k: 5919	n:50000
NBPF1   50000 perm   12 sec   (4029 perm/sec)   p_kst 1.183800e-01   p_cons 6.442000e-02   p_joint 2.164000e-02

Joint ci ratio: 1.079186e-01	ci left: 2.035428e-02	ci right 2.269232e-02	k: 1290	n:60000
Cons ci ratio: 6.039790e-02	ci left: 6.361525e-02	ci right 6.759356e-02	k: 3935	n:60000
KS ci ratio: 4.358151e-02	ci left: 1.162212e-01	ci right 1.214157e-01	k: 7128	n:60000
NBPF1   60000 perm   15 sec   (3935 perm/sec)   p_kst 1.188000e-01   p_cons 6.558333e-02   p_joint 2.150000e-02

Joint ci ratio: 9.559654e-02	ci left: 2.233464e-02	ci right 2.459082e-02	k: 1641	n:70000
Cons ci ratio: 6.207381e-02	ci left: 5.222443e-02	ci right 5.558410e-02	k: 3772	n:70000
KS ci ratio: 4.037668e-02	ci left: 1.162702e-01	ci right 1.210757e-01	k: 8306	n:70000
NBPF1   70000 perm   18 sec   (3888 perm/sec)   p_kst 1.186571e-01   p_cons 5.388571e-02   p_joint 2.344286e-02

Outputting figure to mutsig2_images.part000000000112/NBPF1.2_3517_70000_0.11866_0.053886_0.023443.png
                gene_name: NBPF1
               theta_stop: 0.096 
                    nperm: 70000 
                     p_ks: 0.12 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.054 
      ci_cons_bounds_left: 0.052 
     ci_cons_bounds_right: 0.056 
                  p_joint: 0.023 
     ci_joint_bounds_left: 0.022 
    ci_joint_bounds_right: 0.025 

Current progress: 80 percent done.
NCK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.451871e-02	ci left: 3.314084e-01	ci right 3.500845e-01	k: 3407	n:10000
Cons ci ratio: 2.952506e-02	ci left: 6.284917e-01	ci right 6.474279e-01	k: 6380	n:10000
KS ci ratio: 6.933755e-02	ci left: 2.337305e-01	ci right 2.506200e-01	k: 2421	n:10000
NCK1   10000 perm   2 sec   (6327 perm/sec)   p_kst 2.421000e-01   p_cons 6.380000e-01   p_joint 3.407000e-01

Outputting figure to mutsig2_images.part000000000112/NCK1.2_1146_10000_0.2421_0.638_0.3407.png
                gene_name: NCK1
               theta_stop: 0.069 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 0.34 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.35 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000112
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 112 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1714>
Subject: Job 8704283: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1714>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000113> was used as the working directory.
Started at Thu Nov 15 19:35:02 2012
Results reported at Thu Nov 15 19:37:01 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000113.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000113.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 113  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000113.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    143.06 sec.
    Max Memory :      5514 MB
    Max Swap   :      8409 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
113
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 113
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 113: processing genes 10133 - 10223
Calculating significance of each gene.
Using projection method.
10133	NDC80	2.173707e-01
10134	NDE1	1
10135	NDEL1	1
10136	NDFIP1	1
10137	NDFIP2	1
10138	NDN	1
10139	NDNL2	1
10140	NDOR1	1
10141	NDP	1
10142	NDRG1	1
10143	NDRG2	1
10144	NDRG3	1
10145	NDRG4	1
10146	NDST1	1
10147	NDST2	1.776532e-01
10148	NDST3	3.023129e-01
10149	NDST4	1.323521e-01
10150	NDUFA1	1
10151	NDUFA10	1
10152	NDUFA11	1
10153	NDUFA12	1
10154	NDUFA13	1
10155	NDUFA2	1
10156	NDUFA3	1
10157	NDUFA4	1
10158	NDUFA4L2	1
10159	NDUFA5	1
In gene NDUFA6 the following bins exceed PROBCAP:
    THCA-DJ-A2PY-TP	categ 6	N = 477     n = 1	mu =   6.81e-08
10160	NDUFA6	1.336613e-02
10161	NDUFA7	1
10162	NDUFA8	1
10163	NDUFA9	1
10164	NDUFAB1	1
10165	NDUFAF1	1
10166	NDUFAF2	1
10167	NDUFAF3	1
10168	NDUFAF4	1
10169	NDUFB1	1
10170	NDUFB10	1
10171	NDUFB11	1
10172	NDUFB2	1
10173	NDUFB3	1
10174	NDUFB4	1
10175	NDUFB5	1
10176	NDUFB6	1
10177	NDUFB7	1
10178	NDUFB8	1
10179	NDUFB9	1
10180	NDUFC1	1
10181	NDUFC2	1
10182	NDUFS1	1
10183	NDUFS2	1
10184	NDUFS3	1
10185	NDUFS4	1
10186	NDUFS5	7.686705e-03
10187	NDUFS6	1
10188	NDUFS7	1
10189	NDUFS8	7.082402e-02
10190	NDUFV1	1
10191	NDUFV2	1
10192	NDUFV3	8.625618e-02
10193	NEB	8.833050e-01
10194	NEBL	1
10195	NECAB1	8.084372e-02
10196	NECAB2	1
10197	NECAB3	1
10198	NECAP1	1
10199	NECAP2	1
10200	NEDD1	1
10201	NEDD4	1.887334e-01
10202	NEDD4L	9.682446e-02
10203	NEDD8	1
10204	NEDD9	1
10205	NEFH	1
10206	NEFL	1
In gene NEFM the following bins exceed PROBCAP:
    THCA-DJ-A2Q3-TP	categ 6	N = 2160    n = 1	mu =   1.36e-07
10207	NEFM	1.643488e-01
10208	NEGR1	1
10209	NEIL1	1
10210	NEIL2	8.035335e-02
10211	NEIL3	4.974189e-02
10212	NEK1	1
10213	NEK10	2.315249e-01
10214	NEK11	1.741685e-01
10215	NEK2	1
10216	NEK3	1
10217	NEK4	1
10218	NEK5	1
10219	NEK6	1
10220	NEK7	1
10221	NEK8	1.022164e-02
10222	NEK9	1
10223	NELF	1
Done

Running MutSig 2:
Scatter job 113: processing genes 10133 - 10223
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
NEK8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.950997e-02	ci left: 2.935057e-01	ci right 3.116095e-01	k: 3025	n:10000
KS ci ratio: 1.161133e-02	ci left: 9.138916e-01	ci right 9.246627e-01	k: 9194	n:10000
NEK8   10000 perm   2 sec   (4346 perm/sec)   p_kst 9.194000e-01   p_cons 3.025000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000113/NEK8.2_2139_10000_0.9194_0.3025_1.png
                gene_name: NEK8
               theta_stop: 0.060 
                    nperm: 10000 
                     p_ks: 0.92 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.30 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.31 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000113
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 113 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1643>
Subject: Job 8704284: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1643>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000114> was used as the working directory.
Started at Thu Nov 15 19:35:02 2012
Results reported at Thu Nov 15 19:38:07 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000114.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000114.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 114  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000114.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    209.10 sec.
    Max Memory :      6051 MB
    Max Swap   :      8864 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
114
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 114
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 114: processing genes 10224 - 10313
Calculating significance of each gene.
Using projection method.
10224	NELL1	1
10225	NELL2	1
10226	NENF	1
10227	NEO1	3.288710e-01
10228	NES	4.898285e-01
10229	NET1	1
10230	NETO1	1
In gene NETO2 the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 1576    n = 1	mu =   1.66e-07
10231	NETO2	1.357121e-01
10232	NEU1	1
10233	NEU2	1
10234	NEU3	1
10235	NEU4	1
10236	NEURL	1
10237	NEURL2	1
10238	NEURL4	1
10239	NEUROD1	1
10240	NEUROD2	1
10241	NEUROD4	1
10242	NEUROD6	4.201484e-02
10243	NEUROG1	1
10244	NEUROG2	1
10245	NEUROG3	1
10246	NEXN	2.401450e-02
In gene NF1 the following bins exceed PROBCAP:
    THCA-EM-A1CW-TP	categ 6	N = 8749    n = 1	mu =   1.37e-07
10247	NF1	6.762362e-03
10248	NF2	1.708502e-01
10249	NFAM1	1
10250	NFASC	1
10251	NFAT5	4.040063e-01
10252	NFATC1	8.032999e-02
10253	NFATC2	1
10254	NFATC2IP	1
10255	NFATC3	1
10256	NFATC4	8.683489e-02
10257	NFE2	1
10258	NFE2L1	1
10259	NFE2L2	1
10260	NFE2L3	6.511183e-02
10261	NFIA	1.216812e-01
10262	NFIB	1
10263	NFIC	1.673981e-01
10264	NFIL3	1
10265	NFIX	1
10266	NFKB1	1
10267	NFKB2	1
10268	NFKBIA	1
10269	NFKBIB	1
10270	NFKBID	5.189669e-02
10271	NFKBIE	1
10272	NFKBIL1	1
10273	NFKBIL2	1
10274	NFKBIZ	1
10275	NFRKB	1
10276	NFS1	1
10277	NFU1	1
10278	NFX1	1
In gene NFXL1 the following bins exceed PROBCAP:
    THCA-E3-A3E3-TP	categ 6	N = 2513    n = 1	mu =   1.76e-07
10279	NFXL1	2.208718e-01
10280	NFYA	1
10281	NFYB	1
10282	NFYC	1
10283	NGB	1
10284	NGDN	1
10285	NGEF	3.662687e-02
10286	NGF	8.342549e-02
10287	NGFR	1
10288	NGFRAP1	5.031813e-03
10289	NGLY1	1
10290	NGRN	1
10291	NHEDC1	1
10292	NHEDC2	5.309955e-02
10293	NHEJ1	1
10294	NHLH1	1
10295	NHLH2	1
10296	NHLRC1	1
10297	NHLRC2	6.871671e-02
10298	NHLRC3	1
10299	NHLRC4	1
10300	NHP2	1
10301	NHP2L1	1
10302	NHS	2.172424e-01
10303	NHSL2	1.735735e-01
10304	NICN1	1
10305	NID1	1
10306	NID2	1
10307	NIF3L1	1
10308	NIN	5.892714e-01
10309	NINJ1	1
10310	NINJ2	1
10311	NINL	1
10312	NIP7	1
In gene NIPA1 the following bins exceed PROBCAP:
    THCA-EL-A3TA-TP	categ 6	N = 937     n = 1	mu =   1.04e-07
10313	NIPA1	5.088338e-02
Done

Running MutSig 2:
Scatter job 114: processing genes 10224 - 10313
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
NF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.107787e-02	ci left: 6.043762e-01	ci right 6.235573e-01	k: 6140	n:10000
KS ci ratio: 1.665611e-02	ci left: 8.398953e-01	ci right 8.541019e-01	k: 8471	n:10000
NF1   10000 perm   3 sec   (3448 perm/sec)   p_kst 8.471000e-01   p_cons 6.140000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000114/NF1.5_8813_10000_0.8471_0.614_1.png
                gene_name: NF1
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.85 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 20 percent done.
NEXN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.464933e-02	ci left: 8.709139e-01	ci right 8.838654e-01	k: 8775	n:10000
Cons ci ratio: 5.240337e-02	ci left: 3.492919e-01	ci right 3.681904e-01	k: 3587	n:10000
KS ci ratio: 8.621708e-02	ci left: 1.638637e-01	ci right 1.787283e-01	k: 1712	n:10000
NEXN   10000 perm   3 sec   (3710 perm/sec)   p_kst 1.712000e-01   p_cons 3.587000e-01   p_joint 8.775000e-01

Outputting figure to mutsig2_images.part000000000114/NEXN.2_2076_10000_0.1712_0.3587_0.8775.png
                gene_name: NEXN
               theta_stop: 0.086 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.88 
     ci_joint_bounds_left: 0.87 
    ci_joint_bounds_right: 0.88 

Current progress: 40 percent done.
NFATC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.685760e-02	ci left: 5.208609e-01	ci right 5.405212e-01	k: 5307	n:10000
KS ci ratio: 2.629179e-02	ci left: 6.805286e-01	ci right 6.987608e-01	k: 6897	n:10000
NFATC1   10000 perm   3 sec   (3099 perm/sec)   p_kst 6.897000e-01   p_cons 5.307000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000114/NFATC1.2_3023_10000_0.6897_0.5307_1.png
                gene_name: NFATC1
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.69 
        ci_ks_bounds_left: 0.68 
       ci_ks_bounds_right: 0.70 
                   p_cons: 0.53 
      ci_cons_bounds_left: 0.52 
     ci_cons_bounds_right: 0.54 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 60 percent done.
NFATC4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.265993e-01	ci left: 1.188149e-02	ci right 1.660771e-02	k: 141	n:10000
Cons ci ratio: 7.270890e-02	ci left: 2.169452e-01	ci right 2.334152e-01	k: 2251	n:10000
KS ci ratio: 2.613506e-01	ci left: 1.912136e-02	ci right 2.496169e-02	k: 219	n:10000
NFATC4   10000 perm   2 sec   (4349 perm/sec)   p_kst 2.190000e-02   p_cons 2.251000e-01   p_joint 1.410000e-02

Joint ci ratio: 2.569803e-01	ci left: 1.002189e-02	ci right 1.302265e-02	k: 229	n:20000
Cons ci ratio: 4.927785e-02	ci left: 2.343916e-01	ci right 2.462840e-01	k: 4806	n:20000
KS ci ratio: 1.848072e-01	ci left: 1.996409e-02	ci right 2.407650e-02	k: 439	n:20000
NFATC4   20000 perm   4 sec   (4491 perm/sec)   p_kst 2.195000e-02   p_cons 2.403000e-01   p_joint 1.145000e-02

Joint ci ratio: 8.198932e-02	ci left: 6.788989e-02	ci right 7.372689e-02	k: 2123	n:30000
Cons ci ratio: 4.015652e-02	ci left: 2.362020e-01	ci right 2.459148e-01	k: 7231	n:30000
KS ci ratio: 1.550290e-01	ci left: 1.924700e-02	ci right 2.251338e-02	k: 625	n:30000
NFATC4   30000 perm   7 sec   (4474 perm/sec)   p_kst 2.083333e-02   p_cons 2.410333e-01   p_joint 7.076667e-02

Joint ci ratio: 4.594297e-02	ci left: 1.504259e-01	ci right 1.575244e-01	k: 6158	n:40000
Cons ci ratio: 3.489264e-02	ci left: 2.356472e-01	ci right 2.440406e-01	k: 9593	n:40000
KS ci ratio: 1.359039e-01	ci left: 1.898872e-02	ci right 2.178152e-02	k: 814	n:40000
NFATC4   40000 perm   9 sec   (4435 perm/sec)   p_kst 2.035000e-02   p_cons 2.398250e-01   p_joint 1.539500e-01

Joint ci ratio: 5.445050e-02	ci left: 9.135690e-02	ci right 9.649036e-02	k: 4695	n:50000
Cons ci ratio: 3.260292e-02	ci left: 2.206102e-01	ci right 2.279419e-01	k: 11213	n:50000
KS ci ratio: 1.227142e-01	ci left: 1.877140e-02	ci right 2.124477e-02	k: 999	n:50000
NFATC4   50000 perm   11 sec   (4386 perm/sec)   p_kst 1.998000e-02   p_cons 2.242600e-01   p_joint 9.390000e-02

Joint ci ratio: 4.801858e-02	ci left: 9.756113e-02	ci right 1.023776e-01	k: 5997	n:60000
Cons ci ratio: 2.978625e-02	ci left: 2.206525e-01	ci right 2.273409e-01	k: 13439	n:60000
KS ci ratio: 1.124054e-01	ci left: 1.874885e-02	ci right 2.099793e-02	k: 1191	n:60000
NFATC4   60000 perm   14 sec   (4337 perm/sec)   p_kst 1.985000e-02   p_cons 2.239833e-01   p_joint 9.995000e-02

Joint ci ratio: 4.520933e-02	ci left: 9.478886e-02	ci right 9.918746e-02	k: 6788	n:70000
Cons ci ratio: 2.752131e-02	ci left: 2.215981e-01	ci right 2.277961e-01	k: 15728	n:70000
KS ci ratio: 1.038642e-01	ci left: 1.890606e-02	ci right 2.099114e-02	k: 1395	n:70000
NFATC4   70000 perm   16 sec   (4282 perm/sec)   p_kst 1.992857e-02   p_cons 2.246857e-01   p_joint 9.697143e-02

Joint ci ratio: 4.422834e-02	ci left: 8.743153e-02	ci right 9.139830e-02	k: 7152	n:80000
Cons ci ratio: 2.571985e-02	ci left: 2.221226e-01	ci right 2.279224e-01	k: 18001	n:80000
KS ci ratio: 9.655365e-02	ci left: 1.921190e-02	ci right 2.117311e-02	k: 1614	n:80000
NFATC4   80000 perm   19 sec   (4210 perm/sec)   p_kst 2.017500e-02   p_cons 2.250125e-01   p_joint 8.940000e-02

Outputting figure to mutsig2_images.part000000000114/NFATC4.2_3007_80000_0.020175_0.22501_0.0894.png
                gene_name: NFATC4
               theta_stop: 0.097 
                    nperm: 80000 
                     p_ks: 0.020 
        ci_ks_bounds_left: 0.019 
       ci_ks_bounds_right: 0.021 
                   p_cons: 0.23 
      ci_cons_bounds_left: 0.22 
     ci_cons_bounds_right: 0.23 
                  p_joint: 0.089 
     ci_joint_bounds_left: 0.087 
    ci_joint_bounds_right: 0.091 

Current progress: 80 percent done.
NGEF
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.977892e-02	ci left: 2.916223e-01	ci right 3.096939e-01	k: 3006	n:10000
Cons ci ratio: 1.496550e-01	ci left: 5.937693e-02	ci right 6.907883e-02	k: 641	n:10000
KS ci ratio: 2.415377e-02	ci left: 7.159319e-01	ci right 7.335370e-01	k: 7248	n:10000
NGEF   10000 perm   2 sec   (6007 perm/sec)   p_kst 7.248000e-01   p_cons 6.410000e-02   p_joint 3.006000e-01

Joint ci ratio: 8.449933e-03	ci left: 9.110494e-01	ci right 9.188295e-01	k: 18300	n:20000
Cons ci ratio: 1.028190e-01	ci left: 6.425622e-02	ci right 7.127008e-02	k: 1354	n:20000
KS ci ratio: 1.722951e-02	ci left: 7.150293e-01	ci right 7.275063e-01	k: 14426	n:20000
NGEF   20000 perm   4 sec   (5438 perm/sec)   p_kst 7.213000e-01   p_cons 6.770000e-02   p_joint 9.150000e-01

Joint ci ratio: 1.749283e-02	ci left: 6.204960e-01	ci right 6.314796e-01	k: 18780	n:30000
Cons ci ratio: 7.949942e-02	ci left: 7.197865e-02	ci right 7.797064e-02	k: 2248	n:30000
KS ci ratio: 1.407259e-02	ci left: 7.160544e-01	ci right 7.262360e-01	k: 21635	n:30000
NGEF   30000 perm   6 sec   (5194 perm/sec)   p_kst 7.211667e-01   p_cons 7.493333e-02   p_joint 6.260000e-01

Outputting figure to mutsig2_images.part000000000114/NGEF.2_2300_30000_0.72117_0.074933_0.626.png
                gene_name: NGEF
               theta_stop: 0.079 
                    nperm: 30000 
                     p_ks: 0.72 
        ci_ks_bounds_left: 0.72 
       ci_ks_bounds_right: 0.73 
                   p_cons: 0.075 
      ci_cons_bounds_left: 0.072 
     ci_cons_bounds_right: 0.078 
                  p_joint: 0.63 
     ci_joint_bounds_left: 0.62 
    ci_joint_bounds_right: 0.63 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000114
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 114 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1528>
Subject: Job 8704285: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1528>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000115> was used as the working directory.
Started at Thu Nov 15 19:35:09 2012
Results reported at Thu Nov 15 20:16:22 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000115.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000115.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 115  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000115.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   2767.16 sec.
    Max Memory :      6113 MB
    Max Swap   :      8527 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
115
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 115
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 115: processing genes 10314 - 10403
Calculating significance of each gene.
Using projection method.
10314	NIPA2	1
10315	NIPAL1	1
10316	NIPAL2	1
10317	NIPAL3	1.359674e-01
10318	NIPAL4	1
10319	NIPBL	2.955909e-01
10320	NIPSNAP1	1
10321	NIPSNAP3A	1
10322	NIPSNAP3B	1
10323	NISCH	5.578459e-01
10324	NIT1	1
10325	NIT2	1
10326	NKAIN1	1
10327	NKAIN2	1
10328	NKAIN3	1
10329	NKAIN4	1
10330	NKAP	1
10331	NKAPL	1
10332	NKD1	1.961750e-01
10333	NKD2	1
10334	NKG7	1
10335	NKIRAS1	1
10336	NKIRAS2	1
10337	NKPD1	1
10338	NKRF	1
10339	NKTR	1
10340	NKX2-1	9.623408e-02
10341	NKX2-2	1
10342	NKX2-3	1
10343	NKX2-4	1
10344	NKX2-5	1
10345	NKX2-8	1
10346	NKX3-1	1
10347	NKX3-2	1
In gene NKX6-1 the following bins exceed PROBCAP:
    THCA-ET-A3BO-TP	categ 6	N = 483     n = 1	mu =   1.40e-07
10348	NKX6-1	3.298720e-02
10349	NKX6-2	1
10350	NKX6-3	1
10351	NLE1	1
10352	NLGN1	1
10353	NLGN2	1
10354	NLGN3	1
10355	NLGN4X	1
10356	NLK	1
10357	NLN	1
10358	NLRC3	1
10359	NLRC4	1
In gene NLRC5 the following bins exceed PROBCAP:
    THCA-DJ-A3UV-TP	categ 6	N = 5627    n = 1	mu =   1.01e-07
10360	NLRC5	3.410733e-01
10361	NLRP1	3.811762e-02
10362	NLRP10	1
10363	NLRP11	1.945275e-01
10364	NLRP12	1
10365	NLRP13	1
10366	NLRP14	1
10367	NLRP2	1
10368	NLRP3	1.251869e-01
10369	NLRP4	4.915692e-02
10370	NLRP5	9.306036e-02
10371	NLRP6	8.194881e-03
10372	NLRP7	1
10373	NLRP8	7.194995e-02
10374	NLRP9	1
10375	NLRX1	3.327291e-01
10376	NMB	1
10377	NMBR	1
10378	NMD3	1
10379	NME1	1
10380	NME1-NME2	1
10381	NME2	1
10382	NME3	1
10383	NME4	1
10384	NME5	1
10385	NME6	1
10386	NME7	1
10387	NMI	1
10388	NMNAT1	1
10389	NMNAT2	1
10390	NMNAT3	1
10391	NMRAL1	1
10392	NMS	1
10393	NMT1	1
10394	NMT2	1
10395	NMU	1
10396	NMUR1	1
10397	NMUR2	1
10398	NNAT	1
10399	NNMT	1
10400	NNT	4.099926e-01
10401	NOB1	1
10402	NOBOX	1
10403	NOC2L	1
Done

Running MutSig 2:
Scatter job 115: processing genes 10314 - 10403
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
NISCH
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.745679e-01	ci left: 4.379660e-02	ci right 5.226918e-02	k: 479	n:10000
Cons ci ratio: 5.760589e-02	ci left: 3.072893e-01	ci right 3.256177e-01	k: 3164	n:10000
KS ci ratio: 5.830139e-01	ci left: 3.198812e-03	ci right 5.902342e-03	k: 44	n:10000
NISCH   10000 perm   2 sec   (4492 perm/sec)   p_kst 4.400000e-03   p_cons 3.164000e-01   p_joint 4.790000e-02

Joint ci ratio: 1.162988e-01	ci left: 5.061589e-02	ci right 5.691464e-02	k: 1074	n:20000
Cons ci ratio: 4.038318e-02	ci left: 3.137355e-01	ci right 3.267168e-01	k: 6404	n:20000
KS ci ratio: 3.693575e-01	ci left: 4.567803e-03	ci right 6.679840e-03	k: 111	n:20000
NISCH   20000 perm   8 sec   (2608 perm/sec)   p_kst 5.550000e-03   p_cons 3.202000e-01   p_joint 5.370000e-02

Joint ci ratio: 1.450478e-01	ci left: 2.204044e-02	ci right 2.551929e-02	k: 712	n:30000
Cons ci ratio: 3.216091e-02	ci left: 3.258409e-01	ci right 3.365251e-01	k: 9935	n:30000
KS ci ratio: 3.071465e-01	ci left: 4.571451e-03	ci right 6.259842e-03	k: 161	n:30000
NISCH   30000 perm   10 sec   (2898 perm/sec)   p_kst 5.366667e-03   p_cons 3.311667e-01   p_joint 2.373333e-02

Joint ci ratio: 1.169378e-01	ci left: 2.572495e-02	ci right 2.894417e-02	k: 1092	n:40000
Cons ci ratio: 2.776595e-02	ci left: 3.279328e-01	ci right 3.371915e-01	k: 13302	n:40000
KS ci ratio: 2.685090e-01	ci left: 4.588736e-03	ci right 6.034512e-03	k: 211	n:40000
NISCH   40000 perm   13 sec   (3072 perm/sec)   p_kst 5.275000e-03   p_cons 3.325500e-01   p_joint 2.730000e-02

Joint ci ratio: 1.154959e-01	ci left: 2.121787e-02	ci right 2.383797e-02	k: 1125	n:50000
Cons ci ratio: 2.482204e-02	ci left: 3.286496e-01	ci right 3.369299e-01	k: 16639	n:50000
KS ci ratio: 2.361638e-01	ci left: 4.832940e-03	ci right 6.145478e-03	k: 273	n:50000
NISCH   50000 perm   16 sec   (3167 perm/sec)   p_kst 5.460000e-03   p_cons 3.327800e-01   p_joint 2.250000e-02

Joint ci ratio: 1.874827e-01	ci left: 6.554975e-03	ci right 7.926670e-03	k: 433	n:60000
Cons ci ratio: 2.267889e-02	ci left: 3.286305e-01	ci right 3.361857e-01	k: 19944	n:60000
KS ci ratio: 2.206370e-01	ci left: 4.655960e-03	ci right 5.826015e-03	k: 313	n:60000
NISCH   60000 perm   19 sec   (3222 perm/sec)   p_kst 5.216667e-03   p_cons 3.324000e-01   p_joint 7.216667e-03

Joint ci ratio: 1.734605e-01	ci left: 6.614371e-03	ci right 7.884132e-03	k: 506	n:70000
Cons ci ratio: 2.100142e-02	ci left: 3.288104e-01	ci right 3.358035e-01	k: 23261	n:70000
KS ci ratio: 2.021547e-01	ci left: 4.802700e-03	ci right 5.896062e-03	k: 373	n:70000
NISCH   70000 perm   22 sec   (3248 perm/sec)   p_kst 5.328571e-03   p_cons 3.323000e-01   p_joint 7.228571e-03

Joint ci ratio: 1.231833e-01	ci left: 1.172946e-02	ci right 1.328119e-02	k: 999	n:80000
Cons ci ratio: 1.963183e-02	ci left: 3.293351e-01	ci right 3.358771e-01	k: 26608	n:80000
KS ci ratio: 1.883093e-01	ci left: 4.880089e-03	ci right 5.906282e-03	k: 430	n:80000
NISCH   80000 perm   25 sec   (3258 perm/sec)   p_kst 5.375000e-03   p_cons 3.326000e-01   p_joint 1.248750e-02

Joint ci ratio: 1.195760e-01	ci left: 1.109394e-02	ci right 1.251556e-02	k: 1061	n:90000
Cons ci ratio: 1.855043e-02	ci left: 3.285352e-01	ci right 3.346978e-01	k: 29845	n:90000
KS ci ratio: 1.778859e-01	ci left: 4.889171e-03	ci right 5.854243e-03	k: 482	n:90000
NISCH   90000 perm   28 sec   (3251 perm/sec)   p_kst 5.355556e-03   p_cons 3.316111e-01   p_joint 1.178889e-02

Joint ci ratio: 8.679463e-02	ci left: 1.912166e-02	ci right 2.086634e-02	k: 1998	n:100000
Cons ci ratio: 1.759698e-02	ci left: 3.287319e-01	ci right 3.345779e-01	k: 33165	n:100000
KS ci ratio: 1.654824e-01	ci left: 5.118110e-03	ci right 6.050919e-03	k: 557	n:100000
NISCH   100000 perm   31 sec   (3244 perm/sec)   p_kst 5.570000e-03   p_cons 3.316500e-01   p_joint 1.998000e-02

Joint ci ratio: 8.827984e-02	ci left: 1.683114e-02	ci right 1.839445e-02	k: 1936	n:110000
Cons ci ratio: 1.675319e-02	ci left: 3.295254e-01	ci right 3.351017e-01	k: 36554	n:110000
KS ci ratio: 1.589311e-01	ci left: 5.062748e-03	ci right 5.945450e-03	k: 604	n:110000
NISCH   110000 perm   34 sec   (3230 perm/sec)   p_kst 5.490909e-03   p_cons 3.323091e-01   p_joint 1.760000e-02

Joint ci ratio: 8.955164e-02	ci left: 1.501236e-02	ci right 1.642786e-02	k: 1885	n:120000
Cons ci ratio: 1.604543e-02	ci left: 3.294934e-01	ci right 3.348313e-01	k: 39859	n:120000
KS ci ratio: 1.525139e-01	ci left: 5.057303e-03	ci right 5.900200e-03	k: 656	n:120000
NISCH   120000 perm   37 sec   (3212 perm/sec)   p_kst 5.466667e-03   p_cons 3.321583e-01   p_joint 1.570833e-02

Joint ci ratio: 8.905722e-02	ci left: 1.403021e-02	ci right 1.534541e-02	k: 1908	n:130000
Cons ci ratio: 1.542094e-02	ci left: 3.294553e-01	ci right 3.345829e-01	k: 43162	n:130000
KS ci ratio: 1.462983e-01	ci left: 5.090360e-03	ci right 5.901169e-03	k: 713	n:130000
NISCH   130000 perm   41 sec   (3185 perm/sec)   p_kst 5.484615e-03   p_cons 3.320154e-01   p_joint 1.467692e-02

Joint ci ratio: 1.208673e-01	ci left: 7.006212e-03	ci right 7.914367e-03	k: 1043	n:140000
Cons ci ratio: 1.486220e-02	ci left: 3.294832e-01	ci right 3.344238e-01	k: 46473	n:140000
KS ci ratio: 1.409696e-01	ci left: 5.105507e-03	ci right 5.886617e-03	k: 768	n:140000
NISCH   140000 perm   44 sec   (3155 perm/sec)   p_kst 5.485714e-03   p_cons 3.319500e-01   p_joint 7.450000e-03

Joint ci ratio: 1.127541e-01	ci left: 7.542417e-03	ci right 8.450089e-03	k: 1198	n:150000
Cons ci ratio: 1.435492e-02	ci left: 3.296700e-01	ci right 3.344432e-01	k: 49808	n:150000
KS ci ratio: 1.347120e-01	ci left: 5.235053e-03	ci right 5.997582e-03	k: 841	n:150000
NISCH   150000 perm   48 sec   (3125 perm/sec)   p_kst 5.606667e-03   p_cons 3.320533e-01   p_joint 7.986667e-03

Joint ci ratio: 1.088709e-01	ci left: 7.599708e-03	ci right 8.480758e-03	k: 1285	n:160000
Cons ci ratio: 1.388512e-02	ci left: 3.301915e-01	ci right 3.348145e-01	k: 53200	n:160000
KS ci ratio: 1.292197e-01	ci left: 5.349073e-03	ci right 6.094009e-03	k: 914	n:160000
NISCH   160000 perm   52 sec   (3095 perm/sec)   p_kst 5.712500e-03   p_cons 3.325000e-01   p_joint 8.031250e-03

Joint ci ratio: 1.071071e-01	ci left: 7.398734e-03	ci right 8.241710e-03	k: 1328	n:170000
Cons ci ratio: 1.346967e-02	ci left: 3.302898e-01	ci right 3.347747e-01	k: 56530	n:170000
KS ci ratio: 1.265577e-01	ci left: 5.256478e-03	ci right 5.972305e-03	k: 953	n:170000
NISCH   170000 perm   56 sec   (3059 perm/sec)   p_kst 5.605882e-03   p_cons 3.325294e-01   p_joint 7.811765e-03

Joint ci ratio: 1.037989e-01	ci left: 7.452881e-03	ci right 8.274199e-03	k: 1414	n:180000
Cons ci ratio: 1.309825e-02	ci left: 3.300795e-01	ci right 3.344370e-01	k: 59806	n:180000
KS ci ratio: 1.224517e-01	ci left: 5.314327e-03	ci right 6.012850e-03	k: 1018	n:180000
NISCH   180000 perm   60 sec   (3011 perm/sec)   p_kst 5.655556e-03   p_cons 3.322556e-01   p_joint 7.855556e-03

Joint ci ratio: 9.770949e-02	ci left: 7.989374e-03	ci right 8.815205e-03	k: 1595	n:190000
Cons ci ratio: 1.274960e-02	ci left: 3.301136e-01	ci right 3.343547e-01	k: 63124	n:190000
KS ci ratio: 1.194997e-01	ci left: 5.294921e-03	ci right 5.972928e-03	k: 1069	n:190000
NISCH   190000 perm   64 sec   (2957 perm/sec)   p_kst 5.626316e-03   p_cons 3.322316e-01   p_joint 8.394737e-03

Joint ci ratio: 9.587052e-02	ci left: 7.892381e-03	ci right 8.691969e-03	k: 1657	n:200000
Cons ci ratio: 1.243355e-02	ci left: 3.299261e-01	ci right 3.340588e-01	k: 66398	n:200000
KS ci ratio: 1.162828e-01	ci left: 5.321333e-03	ci right 5.983119e-03	k: 1129	n:200000
NISCH   200000 perm   69 sec   (2905 perm/sec)   p_kst 5.645000e-03   p_cons 3.319900e-01   p_joint 8.285000e-03

Joint ci ratio: 9.163946e-02	ci left: 8.242066e-03	ci right 9.038253e-03	k: 1813	n:210000
Cons ci ratio: 1.213220e-02	ci left: 3.300381e-01	ci right 3.340713e-01	k: 69731	n:210000
KS ci ratio: 1.138428e-01	ci left: 5.294549e-03	ci right 5.938260e-03	k: 1178	n:210000
NISCH   210000 perm   73 sec   (2876 perm/sec)   p_kst 5.609524e-03   p_cons 3.320524e-01   p_joint 8.633333e-03

Joint ci ratio: 8.985217e-02	ci left: 8.191704e-03	ci right 8.966782e-03	k: 1886	n:220000
Cons ci ratio: 1.186233e-02	ci left: 3.297462e-01	ci right 3.336855e-01	k: 72977	n:220000
KS ci ratio: 1.113680e-01	ci left: 5.288011e-03	ci right 5.916032e-03	k: 1231	n:220000
NISCH   220000 perm   77 sec   (2852 perm/sec)   p_kst 5.595455e-03   p_cons 3.317136e-01   p_joint 8.572727e-03

Joint ci ratio: 9.139529e-02	ci left: 7.571976e-03	ci right 8.301376e-03	k: 1824	n:230000
Cons ci ratio: 1.159933e-02	ci left: 3.298756e-01	ci right 3.337286e-01	k: 76314	n:230000
KS ci ratio: 1.088351e-01	ci left: 5.303329e-03	ci right 5.917927e-03	k: 1289	n:230000
NISCH   230000 perm   81 sec   (2825 perm/sec)   p_kst 5.604348e-03   p_cons 3.318000e-01   p_joint 7.930435e-03

Joint ci ratio: 8.891606e-02	ci left: 7.675986e-03	ci right 8.394305e-03	k: 1927	n:240000
Cons ci ratio: 1.135340e-02	ci left: 3.299827e-01	ci right 3.337547e-01	k: 79648	n:240000
KS ci ratio: 1.066267e-01	ci left: 5.301294e-03	ci right 5.902407e-03	k: 1343	n:240000
NISCH   240000 perm   86 sec   (2800 perm/sec)   p_kst 5.595833e-03   p_cons 3.318667e-01   p_joint 8.029167e-03

Joint ci ratio: 8.703953e-02	ci left: 7.697558e-03	ci right 8.401919e-03	k: 2011	n:250000
Cons ci ratio: 1.112560e-02	ci left: 3.299582e-01	ci right 3.336537e-01	k: 82951	n:250000
KS ci ratio: 1.044724e-01	ci left: 5.307330e-03	ci right 5.896222e-03	k: 1399	n:250000
NISCH   250000 perm   90 sec   (2773 perm/sec)   p_kst 5.596000e-03   p_cons 3.318040e-01   p_joint 8.044000e-03

Joint ci ratio: 8.727195e-02	ci left: 7.363819e-03	ci right 8.039532e-03	k: 2001	n:260000
Cons ci ratio: 1.090974e-02	ci left: 3.299862e-01	ci right 3.336098e-01	k: 86267	n:260000
KS ci ratio: 1.025145e-01	ci left: 5.305517e-03	ci right 5.882511e-03	k: 1453	n:260000
NISCH   260000 perm   95 sec   (2745 perm/sec)   p_kst 5.588462e-03   p_cons 3.317962e-01   p_joint 7.696154e-03

Joint ci ratio: 8.572371e-02	ci left: 7.355606e-03	ci right 8.017991e-03	k: 2074	n:270000
Cons ci ratio: 1.070920e-02	ci left: 3.298797e-01	ci right 3.334351e-01	k: 89547	n:270000
KS ci ratio: 1.005287e-01	ci left: 5.318379e-03	ci right 5.884906e-03	k: 1511	n:270000
NISCH   270000 perm   99 sec   (2719 perm/sec)   p_kst 5.596296e-03   p_cons 3.316556e-01   p_joint 7.681481e-03

Joint ci ratio: 8.411703e-02	ci left: 7.372555e-03	ci right 8.023412e-03	k: 2154	n:280000
Cons ci ratio: 1.052060e-02	ci left: 3.297278e-01	ci right 3.332186e-01	k: 92812	n:280000
KS ci ratio: 9.890768e-02	ci left: 5.302552e-03	ci right 5.857757e-03	k: 1561	n:280000
NISCH   280000 perm   104 sec   (2692 perm/sec)   p_kst 5.575000e-03   p_cons 3.314714e-01   p_joint 7.692857e-03

Outputting figure to mutsig2_images.part000000000115/NISCH.3_4599_280000_0.005575_0.33147_0.0076929.png
                gene_name: NISCH
               theta_stop: 0.099 
                    nperm: 280000 
                     p_ks: 0.0056 
        ci_ks_bounds_left: 0.0053 
       ci_ks_bounds_right: 0.0059 
                   p_cons: 0.33 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.0077 
     ci_joint_bounds_left: 0.0074 
    ci_joint_bounds_right: 0.0080 

Current progress: 14 percent done.
NIPBL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 8.869635e-02	ci left: 1.561040e-01	ci right 1.706926e-01	k: 1633	n:10000
KS ci ratio: 7.122053e-02	ci left: 2.241507e-01	ci right 2.408054e-01	k: 2324	n:10000
NIPBL   10000 perm   3 sec   (3423 perm/sec)   p_kst 2.324000e-01   p_cons 1.633000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000115/NIPBL.2_8644_10000_0.2324_0.1633_1.png
                gene_name: NIPBL
               theta_stop: 0.089 
                    nperm: 10000 
                     p_ks: 0.23 
        ci_ks_bounds_left: 0.22 
       ci_ks_bounds_right: 0.24 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.17 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 29 percent done.
NLRP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.651309e-02	ci left: 6.769010e-01	ci right 6.951905e-01	k: 6861	n:10000
Cons ci ratio: 4.342625e-02	ci left: 4.391176e-01	ci right 4.587122e-01	k: 4489	n:10000
KS ci ratio: 6.132368e-03	ci left: 9.730202e-01	ci right 9.790982e-01	k: 9762	n:10000
NLRP1   10000 perm   2 sec   (4696 perm/sec)   p_kst 9.762000e-01   p_cons 4.489000e-01   p_joint 6.861000e-01

Outputting figure to mutsig2_images.part000000000115/NLRP1.2_4565_10000_0.9762_0.4489_0.6861.png
                gene_name: NLRP1
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.98 
        ci_ks_bounds_left: 0.97 
       ci_ks_bounds_right: 0.98 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.69 
     ci_joint_bounds_left: 0.68 
    ci_joint_bounds_right: 0.70 

Current progress: 43 percent done.
NLRP4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.535299e-02	ci left: 5.415883e-01	ci right 5.611817e-01	k: 5514	n:10000
KS ci ratio: 2.575267e-02	ci left: 6.893987e-01	ci right 7.074856e-01	k: 6985	n:10000
NLRP4   10000 perm   2 sec   (5488 perm/sec)   p_kst 6.985000e-01   p_cons 5.514000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000115/NLRP4.2_3021_10000_0.6985_0.5514_1.png
                gene_name: NLRP4
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.69 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 57 percent done.
NLRP5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.151716e-02	ci left: 9.151276e-01	ci right 9.258259e-01	k: 9206	n:10000
Cons ci ratio: 3.501845e-02	ci left: 5.462969e-01	ci right 5.658704e-01	k: 5561	n:10000
KS ci ratio: 3.972278e-02	ci left: 4.834542e-01	ci right 5.031497e-01	k: 4933	n:10000
NLRP5   10000 perm   2 sec   (5066 perm/sec)   p_kst 4.933000e-01   p_cons 5.561000e-01   p_joint 9.206000e-01

Outputting figure to mutsig2_images.part000000000115/NLRP5.2_3663_10000_0.4933_0.5561_0.9206.png
                gene_name: NLRP5
               theta_stop: 0.040 
                    nperm: 10000 
                     p_ks: 0.49 
        ci_ks_bounds_left: 0.48 
       ci_ks_bounds_right: 0.50 
                   p_cons: 0.56 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.57 
                  p_joint: 0.92 
     ci_joint_bounds_left: 0.92 
    ci_joint_bounds_right: 0.93 

Current progress: 71 percent done.
NLRP6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.268333e-01	ci left: 1.861361e-03	ci right 4.044256e-03	k: 28	n:10000
Cons ci ratio: 1.130871e+00	ci left: 5.492399e-04	ci right 1.967349e-03	k: 11	n:10000
KS ci ratio: 8.984102e-01	ci left: 1.067132e-03	ci right 2.843290e-03	k: 18	n:10000
NLRP6   10000 perm   2 sec   (5521 perm/sec)   p_kst 1.800000e-03   p_cons 1.100000e-03   p_joint 2.800000e-03

Joint ci ratio: 6.115581e-01	ci left: 1.429202e-03	ci right 2.722447e-03	k: 40	n:20000
Cons ci ratio: 8.549436e-01	ci left: 6.109296e-04	ci right 1.543998e-03	k: 20	n:20000
KS ci ratio: 7.273797e-01	ci left: 9.304852e-04	ci right 2.022759e-03	k: 28	n:20000
NLRP6   20000 perm   4 sec   (4848 perm/sec)   p_kst 1.400000e-03   p_cons 1.000000e-03   p_joint 2.000000e-03

Joint ci ratio: 8.551005e-01	ci left: 4.072634e-04	ci right 1.029426e-03	k: 20	n:30000
Cons ci ratio: 5.905189e-01	ci left: 1.037499e-03	ci right 1.930210e-03	k: 43	n:30000
KS ci ratio: 5.839110e-01	ci left: 1.065878e-03	ci right 1.968437e-03	k: 44	n:30000
NLRP6   30000 perm   6 sec   (4706 perm/sec)   p_kst 1.466667e-03   p_cons 1.433333e-03   p_joint 6.666667e-04

Joint ci ratio: 1.011937e+00	ci left: 1.913610e-04	ci right 5.871709e-04	k: 14	n:40000
Cons ci ratio: 5.776328e-01	ci left: 8.206974e-04	ci right 1.505052e-03	k: 45	n:40000
KS ci ratio: 4.974483e-01	ci left: 1.166699e-03	ci right 1.958501e-03	k: 61	n:40000
NLRP6   40000 perm   9 sec   (4601 perm/sec)   p_kst 1.525000e-03   p_cons 1.125000e-03   p_joint 3.500000e-04

Joint ci ratio: 6.195523e-01	ci left: 5.547132e-04	ci right 1.066133e-03	k: 39	n:50000
Cons ci ratio: 5.433180e-01	ci left: 7.595484e-04	ci right 1.340896e-03	k: 51	n:50000
KS ci ratio: 4.553489e-01	ci left: 1.144576e-03	ci right 1.835386e-03	k: 73	n:50000
NLRP6   50000 perm   11 sec   (4502 perm/sec)   p_kst 1.460000e-03   p_cons 1.020000e-03   p_joint 7.800000e-04

Joint ci ratio: 5.777461e-01	ci left: 5.471061e-04	ci right 1.003432e-03	k: 45	n:60000
Cons ci ratio: 4.975791e-01	ci left: 7.777559e-04	ci right 1.305762e-03	k: 61	n:60000
KS ci ratio: 4.175634e-01	ci left: 1.161549e-03	ci right 1.788267e-03	k: 87	n:60000
NLRP6   60000 perm   14 sec   (4409 perm/sec)   p_kst 1.450000e-03   p_cons 1.016667e-03   p_joint 7.500000e-04

Joint ci ratio: 6.196249e-01	ci left: 3.962121e-04	ci right 7.615547e-04	k: 39	n:70000
Cons ci ratio: 4.751355e-01	ci left: 7.418472e-04	ci right 1.215381e-03	k: 67	n:70000
KS ci ratio: 3.859621e-01	ci left: 1.188277e-03	ci right 1.768596e-03	k: 102	n:70000
NLRP6   70000 perm   16 sec   (4317 perm/sec)   p_kst 1.457143e-03   p_cons 9.571429e-04   p_joint 5.571429e-04

Joint ci ratio: 3.917525e-01	ci left: 1.005889e-03	ci right 1.506409e-03	k: 99	n:80000
Cons ci ratio: 4.465076e-01	ci left: 7.485627e-04	ci right 1.188925e-03	k: 76	n:80000
KS ci ratio: 3.590762e-01	ci left: 1.221044e-03	ci right 1.766137e-03	k: 118	n:80000
NLRP6   80000 perm   19 sec   (4235 perm/sec)   p_kst 1.475000e-03   p_cons 9.500000e-04   p_joint 1.237500e-03

Joint ci ratio: 4.751876e-01	ci left: 5.769793e-04	ci right 9.453231e-04	k: 67	n:90000
Cons ci ratio: 4.153114e-01	ci left: 7.842779e-04	ci right 1.204513e-03	k: 88	n:90000
KS ci ratio: 3.396540e-01	ci left: 1.227288e-03	ci right 1.739042e-03	k: 132	n:90000
NLRP6   90000 perm   22 sec   (4121 perm/sec)   p_kst 1.466667e-03   p_cons 9.777778e-04   p_joint 7.444444e-04

Joint ci ratio: 4.465512e-01	ci left: 5.988388e-04	ci right 9.511624e-04	k: 76	n:100000
Cons ci ratio: 3.898556e-01	ci left: 8.137117e-04	ci right 1.216136e-03	k: 100	n:100000
KS ci ratio: 3.241830e-01	ci left: 1.223731e-03	ci right 1.705930e-03	k: 145	n:100000
NLRP6   100000 perm   25 sec   (4059 perm/sec)   p_kst 1.450000e-03   p_cons 1.000000e-03   p_joint 7.600000e-04

Joint ci ratio: 4.465671e-01	ci left: 5.443952e-04	ci right 8.647006e-04	k: 76	n:110000
Cons ci ratio: 3.718805e-01	ci left: 8.219479e-04	ci right 1.205147e-03	k: 110	n:110000
KS ci ratio: 3.146386e-01	ci left: 1.187739e-03	ci right 1.639206e-03	k: 154	n:110000
NLRP6   110000 perm   28 sec   (3999 perm/sec)   p_kst 1.400000e-03   p_cons 1.000000e-03   p_joint 6.909091e-04

Joint ci ratio: 4.408874e-01	ci left: 5.138309e-04	ci right 8.111640e-04	k: 78	n:120000
Cons ci ratio: 3.547182e-01	ci left: 8.367566e-04	ci right 1.204711e-03	k: 121	n:120000
KS ci ratio: 2.995550e-01	ci left: 1.211829e-03	ci right 1.646173e-03	k: 170	n:120000
NLRP6   120000 perm   31 sec   (3934 perm/sec)   p_kst 1.416667e-03   p_cons 1.008333e-03   p_joint 6.500000e-04

Joint ci ratio: 4.250430e-01	ci left: 5.154293e-04	ci right 7.999209e-04	k: 84	n:130000
Cons ci ratio: 3.423181e-01	ci left: 8.355629e-04	ci right 1.187308e-03	k: 130	n:130000
KS ci ratio: 2.911673e-01	ci left: 1.189834e-03	ci right 1.602153e-03	k: 180	n:130000
NLRP6   130000 perm   34 sec   (3862 perm/sec)   p_kst 1.384615e-03   p_cons 1.000000e-03   p_joint 6.461538e-04

Joint ci ratio: 5.542707e-01	ci left: 2.589428e-04	ci right 4.626925e-04	k: 49	n:140000
Cons ci ratio: 3.311336e-01	ci left: 8.347316e-04	ci right 1.172200e-03	k: 139	n:140000
KS ci ratio: 2.790909e-01	ci left: 1.210964e-03	ci right 1.610145e-03	k: 196	n:140000
NLRP6   140000 perm   37 sec   (3800 perm/sec)   p_kst 1.400000e-03   p_cons 9.928571e-04   p_joint 3.500000e-04

Joint ci ratio: 5.333466e-01	ci left: 2.646818e-04	ci right 4.621435e-04	k: 53	n:150000
Cons ci ratio: 3.231566e-01	ci left: 8.219166e-04	ci right 1.144541e-03	k: 146	n:150000
KS ci ratio: 2.735966e-01	ci left: 1.179869e-03	ci right 1.559826e-03	k: 204	n:150000
NLRP6   150000 perm   40 sec   (3737 perm/sec)   p_kst 1.360000e-03   p_cons 9.733333e-04   p_joint 3.533333e-04

Joint ci ratio: 5.146263e-01	ci left: 2.698311e-04	ci right 4.615389e-04	k: 57	n:160000
Cons ci ratio: 3.107207e-01	ci left: 8.395846e-04	ci right 1.153950e-03	k: 158	n:160000
KS ci ratio: 2.653141e-01	ci left: 1.181890e-03	ci right 1.549061e-03	k: 217	n:160000
NLRP6   160000 perm   44 sec   (3678 perm/sec)   p_kst 1.356250e-03   p_cons 9.875000e-04   p_joint 3.562500e-04

Joint ci ratio: 5.059790e-01	ci left: 2.642074e-04	ci right 4.476581e-04	k: 59	n:170000
Cons ci ratio: 3.031888e-01	ci left: 8.336318e-04	ci right 1.136743e-03	k: 166	n:170000
KS ci ratio: 2.571842e-01	ci left: 1.189328e-03	ci right 1.545672e-03	k: 231	n:170000
NLRP6   170000 perm   47 sec   (3624 perm/sec)   p_kst 1.358824e-03   p_cons 9.764706e-04   p_joint 3.470588e-04

Joint ci ratio: 6.197358e-01	ci left: 1.540756e-04	ci right 2.961787e-04	k: 39	n:180000
Cons ci ratio: 2.920326e-01	ci left: 8.541525e-04	ci right 1.151186e-03	k: 179	n:180000
KS ci ratio: 2.492517e-01	ci left: 1.201302e-03	ci right 1.548410e-03	k: 246	n:180000
NLRP6   180000 perm   50 sec   (3570 perm/sec)   p_kst 1.366667e-03   p_cons 9.944444e-04   p_joint 2.166667e-04

Joint ci ratio: 7.156324e-01	ci left: 1.022221e-04	ci right 2.191971e-04	k: 29	n:190000
Cons ci ratio: 2.842437e-01	ci left: 8.580261e-04	ci right 1.147021e-03	k: 189	n:190000
KS ci ratio: 2.434102e-01	ci left: 1.197335e-03	ci right 1.533964e-03	k: 258	n:190000
NLRP6   190000 perm   54 sec   (3519 perm/sec)   p_kst 1.357895e-03   p_cons 9.947368e-04   p_joint 1.526316e-04

Joint ci ratio: 2.703630e-01	ci left: 9.081791e-04	ci right 1.196597e-03	k: 209	n:200000
Cons ci ratio: 2.736436e-01	ci left: 8.848824e-04	ci right 1.169898e-03	k: 204	n:200000
KS ci ratio: 2.349419e-01	ci left: 1.226779e-03	ci right 1.557944e-03	k: 277	n:200000
NLRP6   200000 perm   58 sec   (3468 perm/sec)   p_kst 1.385000e-03   p_cons 1.020000e-03   p_joint 1.045000e-03

Joint ci ratio: 4.977658e-01	ci left: 2.221983e-04	ci right 3.731134e-04	k: 61	n:210000
Cons ci ratio: 2.665844e-01	ci left: 8.915799e-04	ci right 1.170108e-03	k: 215	n:210000
KS ci ratio: 2.320426e-01	ci left: 1.199742e-03	ci right 1.519039e-03	k: 284	n:210000
NLRP6   210000 perm   61 sec   (3419 perm/sec)   p_kst 1.352381e-03   p_cons 1.023810e-03   p_joint 2.904762e-04

Joint ci ratio: 4.899276e-01	ci left: 2.200565e-04	ci right 3.663688e-04	k: 63	n:220000
Cons ci ratio: 2.629598e-01	ci left: 8.765153e-04	ci right 1.146001e-03	k: 221	n:220000
KS ci ratio: 2.312388e-01	ci left: 1.153769e-03	ci right 1.459614e-03	k: 286	n:220000
NLRP6   220000 perm   65 sec   (3374 perm/sec)   p_kst 1.300000e-03   p_cons 1.004545e-03   p_joint 2.863636e-04

Joint ci ratio: 4.824484e-01	ci left: 2.181180e-04	ci right 3.601940e-04	k: 65	n:230000
Cons ci ratio: 2.577870e-01	ci left: 8.749827e-04	ci right 1.137854e-03	k: 230	n:230000
KS ci ratio: 2.243092e-01	ci left: 1.177403e-03	ci right 1.478868e-03	k: 304	n:230000
NLRP6   230000 perm   69 sec   (3327 perm/sec)   p_kst 1.321739e-03   p_cons 1.000000e-03   p_joint 2.826087e-04

Joint ci ratio: 4.684603e-01	ci left: 2.236988e-04	ci right 3.638358e-04	k: 69	n:240000
Cons ci ratio: 2.529078e-01	ci left: 8.736252e-04	ci right 1.130338e-03	k: 239	n:240000
KS ci ratio: 2.207215e-01	ci left: 1.167688e-03	ci right 1.461235e-03	k: 314	n:240000
NLRP6   240000 perm   73 sec   (3283 perm/sec)   p_kst 1.308333e-03   p_cons 9.958333e-04   p_joint 2.875000e-04

Joint ci ratio: 4.619090e-01	ci left: 2.218128e-04	ci right 3.582141e-04	k: 71	n:250000
Cons ci ratio: 2.477981e-01	ci left: 8.761710e-04	ci right 1.127629e-03	k: 249	n:250000
KS ci ratio: 2.176362e-01	ci left: 1.155003e-03	ci right 1.440760e-03	k: 323	n:250000
NLRP6   250000 perm   77 sec   (3237 perm/sec)   p_kst 1.292000e-03   p_cons 9.960000e-04   p_joint 2.840000e-04

Joint ci ratio: 4.587360e-01	ci left: 2.166814e-04	ci right 3.487263e-04	k: 72	n:260000
Cons ci ratio: 2.434551e-01	ci left: 8.749570e-04	ci right 1.121000e-03	k: 258	n:260000
KS ci ratio: 2.140340e-01	ci left: 1.150601e-03	ci right 1.429937e-03	k: 334	n:260000
NLRP6   260000 perm   81 sec   (3192 perm/sec)   p_kst 1.284615e-03   p_cons 9.923077e-04   p_joint 2.769231e-04

Joint ci ratio: 4.556274e-01	ci left: 2.119330e-04	ci right 3.399383e-04	k: 73	n:270000
Cons ci ratio: 2.411409e-01	ci left: 8.599446e-04	ci right 1.099124e-03	k: 263	n:270000
KS ci ratio: 2.127711e-01	ci left: 1.122007e-03	ci right 1.392585e-03	k: 338	n:270000
NLRP6   270000 perm   86 sec   (3153 perm/sec)   p_kst 1.251852e-03   p_cons 9.740741e-04   p_joint 2.703704e-04

Joint ci ratio: 4.466632e-01	ci left: 2.138606e-04	ci right 3.397217e-04	k: 76	n:280000
Cons ci ratio: 2.349888e-01	ci left: 8.762513e-04	ci right 1.112845e-03	k: 277	n:280000
KS ci ratio: 2.079197e-01	ci left: 1.136069e-03	ci right 1.402997e-03	k: 354	n:280000
NLRP6   280000 perm   90 sec   (3111 perm/sec)   p_kst 1.264286e-03   p_cons 9.892857e-04   p_joint 2.714286e-04

Joint ci ratio: 4.409736e-01	ci left: 2.126117e-04	ci right 3.356699e-04	k: 78	n:290000
Cons ci ratio: 2.312754e-01	ci left: 8.752577e-04	ci right 1.107315e-03	k: 286	n:290000
KS ci ratio: 2.028390e-01	ci left: 1.155773e-03	ci right 1.419872e-03	k: 372	n:290000
NLRP6   290000 perm   94 sec   (3070 perm/sec)   p_kst 1.282759e-03   p_cons 9.862069e-04   p_joint 2.689655e-04

Joint ci ratio: 4.354960e-01	ci left: 2.114556e-04	ci right 3.318789e-04	k: 80	n:300000
Cons ci ratio: 2.262077e-01	ci left: 8.869336e-04	ci right 1.116215e-03	k: 299	n:300000
KS ci ratio: 1.978602e-01	ci left: 1.177405e-03	ci right 1.439048e-03	k: 391	n:300000
NLRP6   300000 perm   99 sec   (3026 perm/sec)   p_kst 1.303333e-03   p_cons 9.966667e-04   p_joint 2.666667e-04

Joint ci ratio: 4.302176e-01	ci left: 2.103829e-04	ci right 3.283238e-04	k: 82	n:310000
Cons ci ratio: 2.211060e-01	ci left: 9.009551e-04	ci right 1.127894e-03	k: 313	n:310000
KS ci ratio: 1.941793e-01	ci left: 1.185437e-03	ci right 1.443385e-03	k: 406	n:310000
NLRP6   310000 perm   104 sec   (2987 perm/sec)   p_kst 1.309677e-03   p_cons 1.009677e-03   p_joint 2.645161e-04

Joint ci ratio: 4.226470e-01	ci left: 2.121772e-04	ci right 3.284391e-04	k: 85	n:320000
Cons ci ratio: 2.180042e-01	ci left: 8.993786e-04	ci right 1.122317e-03	k: 322	n:320000
KS ci ratio: 1.913788e-01	ci left: 1.184083e-03	ci right 1.437587e-03	k: 418	n:320000
NLRP6   320000 perm   108 sec   (2950 perm/sec)   p_kst 1.306250e-03   p_cons 1.006250e-03   p_joint 2.656250e-04

Joint ci ratio: 4.226487e-01	ci left: 2.057474e-04	ci right 3.184867e-04	k: 85	n:330000
Cons ci ratio: 2.140634e-01	ci left: 9.065214e-04	ci right 1.126635e-03	k: 334	n:330000
KS ci ratio: 1.898017e-01	ci left: 1.168400e-03	ci right 1.416248e-03	k: 425	n:330000
NLRP6   330000 perm   113 sec   (2912 perm/sec)   p_kst 1.287879e-03   p_cons 1.012121e-03   p_joint 2.575758e-04

Joint ci ratio: 4.131490e-01	ci left: 2.102237e-04	ci right 3.221143e-04	k: 89	n:340000
Cons ci ratio: 2.106329e-01	ci left: 9.104917e-04	ci right 1.127569e-03	k: 345	n:340000
KS ci ratio: 1.857039e-01	ci left: 1.187293e-03	ci right 1.433098e-03	k: 444	n:340000
NLRP6   340000 perm   118 sec   (2873 perm/sec)   p_kst 1.305882e-03   p_cons 1.014706e-03   p_joint 2.617647e-04

Joint ci ratio: 4.086340e-01	ci left: 2.093408e-04	ci right 3.192129e-04	k: 91	n:350000
Cons ci ratio: 2.085350e-01	ci left: 9.034276e-04	ci right 1.116402e-03	k: 352	n:350000
KS ci ratio: 1.834509e-01	ci left: 1.183346e-03	ci right 1.425032e-03	k: 455	n:350000
NLRP6   350000 perm   123 sec   (2838 perm/sec)   p_kst 1.300000e-03   p_cons 1.005714e-03   p_joint 2.600000e-04

Joint ci ratio: 4.042638e-01	ci left: 2.085132e-04	ci right 3.164666e-04	k: 93	n:360000
Cons ci ratio: 2.047972e-01	ci left: 9.125753e-04	ci right 1.123367e-03	k: 365	n:360000
KS ci ratio: 1.806978e-01	ci left: 1.187592e-03	ci right 1.426107e-03	k: 469	n:360000
NLRP6   360000 perm   128 sec   (2804 perm/sec)   p_kst 1.302778e-03   p_cons 1.013889e-03   p_joint 2.583333e-04

Joint ci ratio: 3.979630e-01	ci left: 2.101679e-04	ci right 3.168353e-04	k: 96	n:370000
Cons ci ratio: 2.004608e-01	ci left: 9.289613e-04	ci right 1.138439e-03	k: 381	n:370000
KS ci ratio: 1.788064e-01	ci left: 1.181306e-03	ci right 1.415806e-03	k: 479	n:370000
NLRP6   370000 perm   134 sec   (2768 perm/sec)   p_kst 1.294595e-03   p_cons 1.029730e-03   p_joint 2.594595e-04

Joint ci ratio: 3.939230e-01	ci left: 2.093762e-04	ci right 3.142822e-04	k: 98	n:380000
Cons ci ratio: 1.978875e-01	ci left: 9.295184e-04	ci right 1.136106e-03	k: 391	n:380000
KS ci ratio: 1.743215e-01	ci left: 1.213103e-03	ci right 1.447239e-03	k: 504	n:380000
NLRP6   380000 perm   139 sec   (2733 perm/sec)   p_kst 1.326316e-03   p_cons 1.028947e-03   p_joint 2.578947e-04

Joint ci ratio: 3.880866e-01	ci left: 2.109437e-04	ci right 3.146686e-04	k: 101	n:390000
Cons ci ratio: 1.949260e-01	ci left: 9.349411e-04	ci right 1.139256e-03	k: 403	n:390000
KS ci ratio: 1.714587e-01	ci left: 1.223702e-03	ci right 1.455604e-03	k: 521	n:390000
NLRP6   390000 perm   144 sec   (2703 perm/sec)   p_kst 1.335897e-03   p_cons 1.033333e-03   p_joint 2.589744e-04

Joint ci ratio: 4.899602e-01	ci left: 1.210294e-04	ci right 2.015065e-04	k: 63	n:400000
Cons ci ratio: 1.932597e-01	ci left: 9.282169e-04	ci right 1.129124e-03	k: 410	n:400000
KS ci ratio: 1.696807e-01	ci left: 1.219435e-03	ci right 1.447887e-03	k: 532	n:400000
NLRP6   400000 perm   150 sec   (2672 perm/sec)   p_kst 1.330000e-03   p_cons 1.025000e-03   p_joint 1.575000e-04

Joint ci ratio: 4.899612e-01	ci left: 1.180774e-04	ci right 1.965918e-04	k: 63	n:410000
Cons ci ratio: 1.904983e-01	ci left: 9.334400e-04	ci right 1.132257e-03	k: 422	n:410000
KS ci ratio: 1.678025e-01	ci left: 1.217725e-03	ci right 1.443076e-03	k: 544	n:410000
NLRP6   410000 perm   155 sec   (2641 perm/sec)   p_kst 1.326829e-03   p_cons 1.029268e-03   p_joint 1.536585e-04

Joint ci ratio: 5.285375e-01	ci left: 9.658824e-05	ci right 1.677545e-04	k: 54	n:420000
Cons ci ratio: 1.885038e-01	ci left: 9.316272e-04	ci right 1.127742e-03	k: 431	n:420000
KS ci ratio: 1.642234e-01	ci left: 1.243502e-03	ci right 1.468230e-03	k: 568	n:420000
NLRP6   420000 perm   161 sec   (2613 perm/sec)   p_kst 1.352381e-03   p_cons 1.026190e-03   p_joint 1.285714e-04

Joint ci ratio: 5.237973e-01	ci left: 9.635845e-05	ci right 1.664853e-04	k: 55	n:430000
Cons ci ratio: 1.855209e-01	ci left: 9.409958e-04	ci right 1.135596e-03	k: 445	n:430000
KS ci ratio: 1.623790e-01	ci left: 1.243580e-03	ci right 1.465552e-03	k: 581	n:430000
NLRP6   430000 perm   167 sec   (2582 perm/sec)   p_kst 1.351163e-03   p_cons 1.034884e-03   p_joint 1.279070e-04

Joint ci ratio: 5.191825e-01	ci left: 9.614184e-05	ci right 1.652711e-04	k: 56	n:440000
Cons ci ratio: 1.834755e-01	ci left: 9.412872e-04	ci right 1.133563e-03	k: 455	n:440000
KS ci ratio: 1.608664e-01	ci left: 1.239306e-03	ci right 1.458255e-03	k: 592	n:440000
NLRP6   440000 perm   172 sec   (2554 perm/sec)   p_kst 1.345455e-03   p_cons 1.034091e-03   p_joint 1.272727e-04

Joint ci ratio: 5.146875e-01	ci left: 9.593746e-05	ci right 1.641083e-04	k: 57	n:450000
Cons ci ratio: 1.814962e-01	ci left: 9.415768e-04	ci right 1.131608e-03	k: 465	n:450000
KS ci ratio: 1.595276e-01	ci left: 1.233097e-03	ci right 1.448962e-03	k: 602	n:450000
NLRP6   450000 perm   178 sec   (2527 perm/sec)   p_kst 1.337778e-03   p_cons 1.033333e-03   p_joint 1.266667e-04

Joint ci ratio: 5.103072e-01	ci left: 9.574446e-05	ci right 1.629936e-04	k: 58	n:460000
Cons ci ratio: 1.790159e-01	ci left: 9.480938e-04	ci right 1.136543e-03	k: 478	n:460000
KS ci ratio: 1.579638e-01	ci left: 1.231341e-03	ci right 1.444585e-03	k: 614	n:460000
NLRP6   460000 perm   184 sec   (2501 perm/sec)   p_kst 1.334783e-03   p_cons 1.039130e-03   p_joint 1.260870e-04

Joint ci ratio: 5.018715e-01	ci left: 9.741907e-05	ci right 1.643202e-04	k: 60	n:470000
Cons ci ratio: 1.771761e-01	ci left: 9.482497e-04	ci right 1.134585e-03	k: 488	n:470000
KS ci ratio: 1.565702e-01	ci left: 1.227625e-03	ci right 1.438174e-03	k: 625	n:470000
NLRP6   470000 perm   190 sec   (2473 perm/sec)   p_kst 1.329787e-03   p_cons 1.038298e-03   p_joint 1.276596e-04

Joint ci ratio: 4.978078e-01	ci left: 9.721003e-05	ci right 1.632409e-04	k: 61	n:480000
Cons ci ratio: 1.759220e-01	ci left: 9.424332e-04	ci right 1.126175e-03	k: 495	n:480000
KS ci ratio: 1.552128e-01	ci left: 1.224072e-03	ci right 1.432022e-03	k: 636	n:480000
NLRP6   480000 perm   196 sec   (2449 perm/sec)   p_kst 1.325000e-03   p_cons 1.031250e-03   p_joint 1.270833e-04

Joint ci ratio: 4.899675e-01	ci left: 9.879919e-05	ci right 1.644958e-04	k: 63	n:490000
Cons ci ratio: 1.740030e-01	ci left: 9.446658e-04	ci right 1.126623e-03	k: 506	n:490000
KS ci ratio: 1.542481e-01	ci left: 1.214785e-03	ci right 1.419756e-03	k: 644	n:490000
NLRP6   490000 perm   202 sec   (2425 perm/sec)   p_kst 1.314286e-03   p_cons 1.032653e-03   p_joint 1.285714e-04

Joint ci ratio: 4.861841e-01	ci left: 9.857695e-05	ci right 1.634502e-04	k: 64	n:500000
Cons ci ratio: 1.714840e-01	ci left: 9.544759e-04	ci right 1.135386e-03	k: 521	n:500000
KS ci ratio: 1.531837e-01	ci left: 1.207796e-03	ci right 1.410053e-03	k: 653	n:500000
NLRP6   500000 perm   208 sec   (2401 perm/sec)   p_kst 1.306000e-03   p_cons 1.042000e-03   p_joint 1.280000e-04

Joint ci ratio: 4.861847e-01	ci left: 9.664404e-05	ci right 1.602454e-04	k: 64	n:510000
Cons ci ratio: 1.689139e-01	ci left: 9.657974e-04	ci right 1.145830e-03	k: 537	n:510000
KS ci ratio: 1.513432e-01	ci left: 1.214292e-03	ci right 1.414972e-03	k: 669	n:510000
NLRP6   510000 perm   215 sec   (2377 perm/sec)   p_kst 1.311765e-03   p_cons 1.052941e-03   p_joint 1.254902e-04

Joint ci ratio: 4.824876e-01	ci left: 9.647364e-05	ci right 1.593200e-04	k: 65	n:520000
Cons ci ratio: 1.663058e-01	ci left: 9.785459e-04	ci right 1.157857e-03	k: 554	n:520000
KS ci ratio: 1.495674e-01	ci left: 1.220551e-03	ci right 1.419687e-03	k: 685	n:520000
NLRP6   520000 perm   221 sec   (2354 perm/sec)   p_kst 1.317308e-03   p_cons 1.065385e-03   p_joint 1.250000e-04

Joint ci ratio: 4.753389e-01	ci left: 9.797126e-05	ci right 1.605400e-04	k: 67	n:530000
Cons ci ratio: 1.641023e-01	ci left: 9.872150e-04	ci right 1.165481e-03	k: 569	n:530000
KS ci ratio: 1.479583e-01	ci left: 1.224770e-03	ci right 1.422255e-03	k: 700	n:530000
NLRP6   530000 perm   227 sec   (2330 perm/sec)   p_kst 1.320755e-03   p_cons 1.073585e-03   p_joint 1.264151e-04

Joint ci ratio: 4.684988e-01	ci left: 9.942006e-05	ci right 1.617082e-04	k: 69	n:540000
Cons ci ratio: 1.615699e-01	ci left: 1.000909e-03	ci right 1.178588e-03	k: 587	n:540000
KS ci ratio: 1.467081e-01	ci left: 1.223492e-03	ci right 1.418958e-03	k: 712	n:540000
NLRP6   540000 perm   234 sec   (2308 perm/sec)   p_kst 1.318519e-03   p_cons 1.087037e-03   p_joint 1.277778e-04

Joint ci ratio: 4.978120e-01	ci left: 8.483770e-05	ci right 1.424651e-04	k: 61	n:550000
Cons ci ratio: 1.604823e-01	ci left: 9.966696e-04	ci right 1.172290e-03	k: 595	n:550000
KS ci ratio: 1.454890e-01	ci left: 1.222268e-03	ci right 1.415774e-03	k: 724	n:550000
NLRP6   550000 perm   241 sec   (2286 perm/sec)   p_kst 1.316364e-03   p_cons 1.081818e-03   p_joint 1.109091e-04

Joint ci ratio: 4.978125e-01	ci left: 8.332272e-05	ci right 1.399211e-04	k: 61	n:560000
Cons ci ratio: 1.590215e-01	ci left: 9.977296e-04	ci right 1.171784e-03	k: 606	n:560000
KS ci ratio: 1.441042e-01	ci left: 1.224536e-03	ci right 1.416397e-03	k: 738	n:560000
NLRP6   560000 perm   248 sec   (2263 perm/sec)   p_kst 1.317857e-03   p_cons 1.082143e-03   p_joint 1.089286e-04

Joint ci ratio: 4.938459e-01	ci left: 8.339580e-05	ci right 1.394386e-04	k: 62	n:570000
Cons ci ratio: 1.581130e-01	ci left: 9.920187e-04	ci right 1.163994e-03	k: 613	n:570000
KS ci ratio: 1.427582e-01	ci left: 1.226733e-03	ci right 1.416990e-03	k: 752	n:570000
NLRP6   570000 perm   254 sec   (2242 perm/sec)   p_kst 1.319298e-03   p_cons 1.075439e-03   p_joint 1.087719e-04

Joint ci ratio: 4.861885e-01	ci left: 8.497997e-05	ci right 1.409057e-04	k: 64	n:580000
Cons ci ratio: 1.565900e-01	ci left: 9.947900e-04	ci right 1.165429e-03	k: 625	n:580000
KS ci ratio: 1.414493e-01	ci left: 1.228862e-03	ci right 1.417555e-03	k: 766	n:580000
NLRP6   580000 perm   261 sec   (2220 perm/sec)   p_kst 1.320690e-03   p_cons 1.077586e-03   p_joint 1.103448e-04

Joint ci ratio: 4.788766e-01	ci left: 8.651695e-05	ci right 1.423168e-04	k: 66	n:590000
Cons ci ratio: 1.555993e-01	ci left: 9.909587e-04	ci right 1.159765e-03	k: 633	n:590000
KS ci ratio: 1.400859e-01	ci left: 1.232563e-03	ci right 1.419847e-03	k: 781	n:590000
NLRP6   590000 perm   268 sec   (2200 perm/sec)   p_kst 1.323729e-03   p_cons 1.072881e-03   p_joint 1.118644e-04

Joint ci ratio: 4.753425e-01	ci left: 8.654115e-05	ci right 1.418106e-04	k: 67	n:600000
Cons ci ratio: 1.541472e-01	ci left: 9.936678e-04	ci right 1.161210e-03	k: 645	n:600000
KS ci ratio: 1.392871e-01	ci left: 1.226495e-03	ci right 1.411707e-03	k: 790	n:600000
NLRP6   600000 perm   275 sec   (2180 perm/sec)   p_kst 1.316667e-03   p_cons 1.075000e-03   p_joint 1.116667e-04

Joint ci ratio: 4.685023e-01	ci left: 8.801106e-05	ci right 1.431518e-04	k: 69	n:610000
Cons ci ratio: 1.525031e-01	ci left: 9.994487e-04	ci right 1.166004e-03	k: 659	n:610000
KS ci ratio: 1.379847e-01	ci left: 1.230126e-03	ci right 1.414006e-03	k: 805	n:610000
NLRP6   610000 perm   283 sec   (2159 perm/sec)   p_kst 1.319672e-03   p_cons 1.080328e-03   p_joint 1.131148e-04

Joint ci ratio: 4.651914e-01	ci left: 8.801463e-05	ci right 1.426443e-04	k: 70	n:620000
Cons ci ratio: 1.513608e-01	ci left: 9.988444e-04	ci right 1.163939e-03	k: 669	n:620000
KS ci ratio: 1.368017e-01	ci left: 1.232090e-03	ci right 1.414556e-03	k: 819	n:620000
NLRP6   620000 perm   290 sec   (2140 perm/sec)   p_kst 1.320968e-03   p_cons 1.079032e-03   p_joint 1.129032e-04

Joint ci ratio: 4.651918e-01	ci left: 8.661755e-05	ci right 1.403801e-04	k: 70	n:630000
Cons ci ratio: 1.501334e-01	ci left: 9.997915e-04	ci right 1.163582e-03	k: 680	n:630000
KS ci ratio: 1.361398e-01	ci left: 1.224798e-03	ci right 1.405235e-03	k: 827	n:630000
NLRP6   630000 perm   297 sec   (2119 perm/sec)   p_kst 1.312698e-03   p_cons 1.079365e-03   p_joint 1.111111e-04

Joint ci ratio: 4.587748e-01	ci left: 8.802533e-05	ci right 1.416731e-04	k: 72	n:640000
Cons ci ratio: 1.481869e-01	ci left: 1.011246e-03	ci right 1.174575e-03	k: 698	n:640000
KS ci ratio: 1.346035e-01	ci left: 1.234343e-03	ci right 1.413970e-03	k: 846	n:640000
NLRP6   640000 perm   305 sec   (2100 perm/sec)   p_kst 1.321875e-03   p_cons 1.090625e-03   p_joint 1.125000e-04

Joint ci ratio: 4.556645e-01	ci left: 8.803230e-05	ci right 1.412080e-04	k: 73	n:650000
Cons ci ratio: 1.475555e-01	ci left: 1.004577e-03	ci right 1.166077e-03	k: 704	n:650000
KS ci ratio: 1.335046e-01	ci left: 1.236169e-03	ci right 1.414477e-03	k: 860	n:650000
NLRP6   650000 perm   312 sec   (2082 perm/sec)   p_kst 1.323077e-03   p_cons 1.083077e-03   p_joint 1.123077e-04

Joint ci ratio: 4.651930e-01	ci left: 8.268035e-05	ci right 1.339993e-04	k: 70	n:660000
Cons ci ratio: 1.466228e-01	ci left: 1.002490e-03	ci right 1.162547e-03	k: 713	n:660000
KS ci ratio: 1.326601e-01	ci left: 1.233551e-03	ci right 1.410267e-03	k: 871	n:660000
NLRP6   660000 perm   320 sec   (2063 perm/sec)   p_kst 1.319697e-03   p_cons 1.080303e-03   p_joint 1.060606e-04

Joint ci ratio: 4.526169e-01	ci left: 8.672621e-05	ci right 1.386551e-04	k: 74	n:670000
Cons ci ratio: 1.457076e-01	ci left: 1.000469e-03	ci right 1.159119e-03	k: 722	n:670000
KS ci ratio: 1.316822e-01	ci left: 1.233901e-03	ci right 1.409262e-03	k: 884	n:670000
NLRP6   670000 perm   327 sec   (2046 perm/sec)   p_kst 1.319403e-03   p_cons 1.077612e-03   p_joint 1.104478e-04

Joint ci ratio: 4.466998e-01	ci left: 8.805886e-05	ci right 1.398882e-04	k: 76	n:680000
Cons ci ratio: 1.445131e-01	ci left: 1.002763e-03	ci right 1.160360e-03	k: 734	n:680000
KS ci ratio: 1.302184e-01	ci left: 1.244204e-03	ci right 1.418912e-03	k: 904	n:680000
NLRP6   680000 perm   335 sec   (2029 perm/sec)   p_kst 1.329412e-03   p_cons 1.079412e-03   p_joint 1.117647e-04

Joint ci ratio: 4.467002e-01	ci left: 8.678263e-05	ci right 1.378609e-04	k: 76	n:690000
Cons ci ratio: 1.439273e-01	ci left: 9.966119e-04	ci right 1.152553e-03	k: 740	n:690000
KS ci ratio: 1.295761e-01	ci left: 1.238792e-03	ci right 1.411815e-03	k: 913	n:690000
NLRP6   690000 perm   343 sec   (2012 perm/sec)   p_kst 1.323188e-03   p_cons 1.072464e-03   p_joint 1.101449e-04

Joint ci ratio: 4.438276e-01	ci left: 8.681122e-05	ci right 1.374792e-04	k: 77	n:700000
Cons ci ratio: 1.429660e-01	ci left: 9.961475e-04	ci right 1.150886e-03	k: 750	n:700000
KS ci ratio: 1.288035e-01	ci left: 1.236301e-03	ci right 1.407869e-03	k: 924	n:700000
NLRP6   700000 perm   351 sec   (1995 perm/sec)   p_kst 1.320000e-03   p_cons 1.071429e-03   p_joint 1.100000e-04

Joint ci ratio: 4.438279e-01	ci left: 8.558852e-05	ci right 1.355429e-04	k: 77	n:710000
Cons ci ratio: 1.413742e-01	ci left: 1.005210e-03	ci right 1.159471e-03	k: 767	n:710000
KS ci ratio: 1.283195e-01	ci left: 1.228430e-03	ci right 1.398216e-03	k: 931	n:710000
NLRP6   710000 perm   359 sec   (1978 perm/sec)   p_kst 1.311268e-03   p_cons 1.080282e-03   p_joint 1.084507e-04

Joint ci ratio: 4.438282e-01	ci left: 8.439978e-05	ci right 1.336604e-04	k: 77	n:720000
Cons ci ratio: 1.400131e-01	ci left: 1.011349e-03	ci right 1.164933e-03	k: 782	n:720000
KS ci ratio: 1.270976e-01	ci left: 1.235570e-03	ci right 1.404594e-03	k: 949	n:720000
NLRP6   720000 perm   367 sec   (1962 perm/sec)   p_kst 1.318056e-03   p_cons 1.086111e-03   p_joint 1.069444e-04

Joint ci ratio: 4.131785e-01	ci left: 9.791112e-05	ci right 1.500282e-04	k: 89	n:730000
Cons ci ratio: 1.392155e-01	ci left: 1.009393e-03	ci right 1.161734e-03	k: 791	n:730000
KS ci ratio: 1.260404e-01	ci left: 1.239868e-03	ci right 1.407964e-03	k: 965	n:730000
NLRP6   730000 perm   376 sec   (1944 perm/sec)   p_kst 1.321918e-03   p_cons 1.083562e-03   p_joint 1.219178e-04

Joint ci ratio: 4.064592e-01	ci left: 1.002241e-04	ci right 1.524706e-04	k: 92	n:740000
Cons ci ratio: 1.378297e-01	ci left: 1.016625e-03	ci right 1.168405e-03	k: 807	n:740000
KS ci ratio: 1.251368e-01	ci left: 1.241438e-03	ci right 1.408451e-03	k: 979	n:740000
NLRP6   740000 perm   384 sec   (1926 perm/sec)   p_kst 1.322973e-03   p_cons 1.090541e-03   p_joint 1.243243e-04

Joint ci ratio: 4.021578e-01	ci left: 1.012832e-04	ci right 1.533741e-04	k: 94	n:750000
Cons ci ratio: 1.365675e-01	ci left: 1.022383e-03	ci right 1.173512e-03	k: 822	n:750000
KS ci ratio: 1.246928e-01	ci left: 1.233927e-03	ci right 1.399297e-03	k: 986	n:750000
NLRP6   750000 perm   392 sec   (1911 perm/sec)   p_kst 1.314667e-03   p_cons 1.096000e-03   p_joint 1.253333e-04

Joint ci ratio: 4.000578e-01	ci left: 1.011336e-04	ci right 1.528039e-04	k: 95	n:760000
Cons ci ratio: 1.351780e-01	ci left: 1.030539e-03	ci right 1.181199e-03	k: 839	n:760000
KS ci ratio: 1.235707e-01	ci left: 1.240640e-03	ci right 1.405304e-03	k: 1004	n:760000
NLRP6   760000 perm   401 sec   (1897 perm/sec)   p_kst 1.321053e-03   p_cons 1.103947e-03   p_joint 1.250000e-04

Joint ci ratio: 3.979904e-01	ci left: 1.009885e-04	ci right 1.522478e-04	k: 96	n:770000
Cons ci ratio: 1.343015e-01	ci left: 1.030960e-03	ci right 1.180626e-03	k: 850	n:770000
KS ci ratio: 1.227188e-01	ci left: 1.242150e-03	ci right 1.405795e-03	k: 1018	n:770000
NLRP6   770000 perm   409 sec   (1882 perm/sec)   p_kst 1.322078e-03   p_cons 1.103896e-03   p_joint 1.246753e-04

Joint ci ratio: 3.919746e-01	ci left: 1.031580e-04	ci right 1.545222e-04	k: 99	n:780000
Cons ci ratio: 1.334418e-01	ci left: 1.031373e-03	ci right 1.180065e-03	k: 861	n:780000
KS ci ratio: 1.213561e-01	ci left: 1.254812e-03	ci right 1.418158e-03	k: 1041	n:780000
NLRP6   780000 perm   418 sec   (1868 perm/sec)   p_kst 1.334615e-03   p_cons 1.103846e-03   p_joint 1.269231e-04

Joint ci ratio: 3.519985e-01	ci left: 1.294004e-04	ci right 1.857648e-04	k: 123	n:790000
Cons ci ratio: 1.322954e-01	ci left: 1.036674e-03	ci right 1.184745e-03	k: 876	n:790000
KS ci ratio: 1.205489e-01	ci left: 1.256114e-03	ci right 1.418464e-03	k: 1055	n:790000
NLRP6   790000 perm   426 sec   (1853 perm/sec)   p_kst 1.335443e-03   p_cons 1.108861e-03   p_joint 1.556962e-04

Joint ci ratio: 3.491936e-01	ci left: 1.300627e-04	ci right 1.861620e-04	k: 125	n:800000
Cons ci ratio: 1.316964e-01	ci left: 1.033385e-03	ci right 1.180266e-03	k: 884	n:800000
KS ci ratio: 1.197017e-01	ci left: 1.258599e-03	ci right 1.420046e-03	k: 1070	n:800000
NLRP6   800000 perm   435 sec   (1839 perm/sec)   p_kst 1.337500e-03   p_cons 1.105000e-03   p_joint 1.562500e-04

Joint ci ratio: 3.424641e-01	ci left: 1.340939e-04	ci right 1.905705e-04	k: 130	n:810000
Cons ci ratio: 1.309587e-01	ci left: 1.032567e-03	ci right 1.178446e-03	k: 894	n:810000
KS ci ratio: 1.189818e-01	ci left: 1.258631e-03	ci right 1.419043e-03	k: 1083	n:810000
NLRP6   810000 perm   444 sec   (1825 perm/sec)   p_kst 1.337037e-03   p_cons 1.103704e-03   p_joint 1.604938e-04

Joint ci ratio: 3.411645e-01	ci left: 1.335734e-04	ci right 1.895703e-04	k: 131	n:820000
Cons ci ratio: 1.301612e-01	ci left: 1.032951e-03	ci right 1.177927e-03	k: 905	n:820000
KS ci ratio: 1.183287e-01	ci left: 1.257482e-03	ci right 1.416806e-03	k: 1095	n:820000
NLRP6   820000 perm   453 sec   (1812 perm/sec)   p_kst 1.335366e-03   p_cons 1.103659e-03   p_joint 1.597561e-04

Joint ci ratio: 3.411649e-01	ci left: 1.319641e-04	ci right 1.872864e-04	k: 131	n:830000
Cons ci ratio: 1.293782e-01	ci left: 1.033329e-03	ci right 1.177418e-03	k: 916	n:830000
KS ci ratio: 1.177928e-01	ci left: 1.254024e-03	ci right 1.412140e-03	k: 1105	n:830000
NLRP6   830000 perm   461 sec   (1799 perm/sec)   p_kst 1.331325e-03   p_cons 1.103614e-03   p_joint 1.578313e-04

Joint ci ratio: 3.373526e-01	ci left: 1.336603e-04	ci right 1.889313e-04	k: 134	n:840000
Cons ci ratio: 1.285398e-01	ci left: 1.034852e-03	ci right 1.178147e-03	k: 928	n:840000
KS ci ratio: 1.171590e-01	ci left: 1.252961e-03	ci right 1.410034e-03	k: 1117	n:840000
NLRP6   840000 perm   471 sec   (1785 perm/sec)   p_kst 1.329762e-03   p_cons 1.104762e-03   p_joint 1.595238e-04

Joint ci ratio: 2.100909e-01	ci left: 3.664146e-04	ci right 4.535196e-04	k: 347	n:850000
Cons ci ratio: 1.280586e-01	ci left: 1.030649e-03	ci right 1.172786e-03	k: 935	n:850000
KS ci ratio: 1.162780e-01	ci left: 1.257636e-03	ci right 1.414029e-03	k: 1134	n:850000
NLRP6   850000 perm   480 sec   (1772 perm/sec)   p_kst 1.334118e-03   p_cons 1.100000e-03   p_joint 4.082353e-04

Joint ci ratio: 2.091913e-01	ci left: 3.654592e-04	ci right 4.519174e-04	k: 350	n:860000
Cons ci ratio: 1.276505e-01	ci left: 1.025418e-03	ci right 1.166349e-03	k: 941	n:860000
KS ci ratio: 1.152665e-01	ci left: 1.265595e-03	ci right 1.421515e-03	k: 1154	n:860000
NLRP6   860000 perm   489 sec   (1759 perm/sec)   p_kst 1.341860e-03   p_cons 1.094186e-03   p_joint 4.069767e-04

Joint ci ratio: 2.071357e-01	ci left: 3.688852e-04	ci right 4.551877e-04	k: 357	n:870000
Cons ci ratio: 1.269783e-01	ci left: 1.024759e-03	ci right 1.164803e-03	k: 951	n:870000
KS ci ratio: 1.140865e-01	ci left: 1.277844e-03	ci right 1.433553e-03	k: 1178	n:870000
NLRP6   870000 perm   498 sec   (1746 perm/sec)   p_kst 1.354023e-03   p_cons 1.093103e-03   p_joint 4.103448e-04

Joint ci ratio: 2.062733e-01	ci left: 3.679259e-04	ci right 4.536004e-04	k: 360	n:880000
Cons ci ratio: 1.263825e-01	ci left: 1.023018e-03	ci right 1.162118e-03	k: 960	n:880000
KS ci ratio: 1.135582e-01	ci left: 1.275467e-03	ci right 1.430118e-03	k: 1189	n:880000
NLRP6   880000 perm   508 sec   (1732 perm/sec)   p_kst 1.351136e-03   p_cons 1.090909e-03   p_joint 4.090909e-04

Joint ci ratio: 2.040246e-01	ci left: 3.723190e-04	ci right 4.579535e-04	k: 368	n:890000
Cons ci ratio: 1.254716e-01	ci left: 1.026758e-03	ci right 1.165286e-03	k: 974	n:890000
KS ci ratio: 1.126154e-01	ci left: 1.282972e-03	ci right 1.437156e-03	k: 1209	n:890000
NLRP6   890000 perm   518 sec   (1720 perm/sec)   p_kst 1.358427e-03   p_cons 1.094382e-03   p_joint 4.134831e-04

Joint ci ratio: 2.029277e-01	ci left: 3.724002e-04	ci right 4.575357e-04	k: 372	n:900000
Cons ci ratio: 1.247698e-01	ci left: 1.027189e-03	ci right 1.164943e-03	k: 985	n:900000
KS ci ratio: 1.120612e-01	ci left: 1.281676e-03	ci right 1.434896e-03	k: 1221	n:900000
NLRP6   900000 perm   527 sec   (1708 perm/sec)   p_kst 1.356667e-03   p_cons 1.094444e-03   p_joint 4.133333e-04

Joint ci ratio: 2.018483e-01	ci left: 3.724807e-04	ci right 4.571259e-04	k: 376	n:910000
Cons ci ratio: 1.238931e-01	ci left: 1.030808e-03	ci right 1.168004e-03	k: 999	n:910000
KS ci ratio: 1.114247e-01	ci left: 1.282546e-03	ci right 1.434942e-03	k: 1235	n:910000
NLRP6   910000 perm   537 sec   (1696 perm/sec)   p_kst 1.357143e-03   p_cons 1.097802e-03   p_joint 4.131868e-04

Joint ci ratio: 1.859900e-01	ci left: 4.377297e-04	ci right 5.285070e-04	k: 443	n:920000
Cons ci ratio: 1.230346e-01	ci left: 1.034351e-03	ci right 1.170995e-03	k: 1013	n:920000
KS ci ratio: 1.108878e-01	ci left: 1.281286e-03	ci right 1.432751e-03	k: 1247	n:920000
NLRP6   920000 perm   546 sec   (1684 perm/sec)   p_kst 1.355435e-03   p_cons 1.101087e-03   p_joint 4.815217e-04

Joint ci ratio: 1.855728e-01	ci left: 4.350734e-04	ci right 5.250746e-04	k: 445	n:930000
Cons ci ratio: 1.228536e-01	ci left: 1.026355e-03	ci right 1.161729e-03	k: 1016	n:930000
KS ci ratio: 1.101836e-01	ci left: 1.284237e-03	ci right 1.435025e-03	k: 1263	n:930000
NLRP6   930000 perm   556 sec   (1671 perm/sec)   p_kst 1.358065e-03   p_cons 1.092473e-03   p_joint 4.784946e-04

Joint ci ratio: 1.845412e-01	ci left: 4.355177e-04	ci right 5.250540e-04	k: 450	n:940000
Cons ci ratio: 1.224332e-01	ci left: 1.022655e-03	ci right 1.157046e-03	k: 1023	n:940000
KS ci ratio: 1.092791e-01	ci left: 1.292303e-03	ci right 1.442712e-03	k: 1284	n:940000
NLRP6   940000 perm   566 sec   (1660 perm/sec)   p_kst 1.365957e-03   p_cons 1.088298e-03   p_joint 4.787234e-04

Joint ci ratio: 1.827266e-01	ci left: 4.399716e-04	ci right 5.294357e-04	k: 459	n:950000
Cons ci ratio: 1.216632e-01	ci left: 1.025156e-03	ci right 1.158968e-03	k: 1036	n:950000
KS ci ratio: 1.085215e-01	ci left: 1.297131e-03	ci right 1.446988e-03	k: 1302	n:950000
NLRP6   950000 perm   576 sec   (1648 perm/sec)   p_kst 1.370526e-03   p_cons 1.090526e-03   p_joint 4.831579e-04

Joint ci ratio: 1.819374e-01	ci left: 4.393650e-04	ci right 5.282774e-04	k: 463	n:960000
Cons ci ratio: 1.211388e-01	ci left: 1.023568e-03	ci right 1.156555e-03	k: 1045	n:960000
KS ci ratio: 1.081902e-01	ci left: 1.291727e-03	ci right 1.440475e-03	k: 1310	n:960000
NLRP6   960000 perm   586 sec   (1638 perm/sec)   p_kst 1.364583e-03   p_cons 1.088542e-03   p_joint 4.822917e-04

Joint ci ratio: 1.801977e-01	ci left: 4.436934e-04	ci right 5.325295e-04	k: 472	n:970000
Cons ci ratio: 1.203360e-01	ci left: 1.027013e-03	ci right 1.159500e-03	k: 1059	n:970000
KS ci ratio: 1.076985e-01	ci left: 1.290447e-03	ci right 1.438329e-03	k: 1322	n:970000
NLRP6   970000 perm   596 sec   (1627 perm/sec)   p_kst 1.362887e-03   p_cons 1.091753e-03   p_joint 4.865979e-04

Joint ci ratio: 1.790655e-01	ci left: 4.450131e-04	ci right 5.334930e-04	k: 478	n:980000
Cons ci ratio: 1.198846e-01	ci left: 1.024451e-03	ci right 1.156077e-03	k: 1067	n:980000
KS ci ratio: 1.070930e-01	ci left: 1.292174e-03	ci right 1.439370e-03	k: 1337	n:980000
NLRP6   980000 perm   606 sec   (1617 perm/sec)   p_kst 1.364286e-03   p_cons 1.088776e-03   p_joint 4.877551e-04

Joint ci ratio: 1.786931e-01	ci left: 4.424477e-04	ci right 5.302148e-04	k: 480	n:990000
Cons ci ratio: 1.194939e-01	ci left: 1.020962e-03	ci right 1.151682e-03	k: 1074	n:990000
KS ci ratio: 1.063796e-01	ci left: 1.296819e-03	ci right 1.443497e-03	k: 1355	n:990000
NLRP6   990000 perm   616 sec   (1606 perm/sec)   p_kst 1.368687e-03   p_cons 1.084848e-03   p_joint 4.848485e-04

Joint ci ratio: 1.813535e-01	ci left: 4.246537e-04	ci right 5.102829e-04	k: 466	n:1000000
Cons ci ratio: 1.189420e-01	ci left: 1.020454e-03	ci right 1.150464e-03	k: 1084	n:1000000
KS ci ratio: 1.057574e-01	ci left: 1.299426e-03	ci right 1.445487e-03	k: 1371	n:1000000
NLRP6   1000000 perm   627 sec   (1596 perm/sec)   p_kst 1.371000e-03   p_cons 1.084000e-03   p_joint 4.660000e-04

Joint ci ratio: 1.798195e-01	ci left: 4.280121e-04	ci right 5.135090e-04	k: 474	n:1010000
Cons ci ratio: 1.181818e-01	ci left: 1.023801e-03	ci right 1.153345e-03	k: 1098	n:1010000
KS ci ratio: 1.050702e-01	ci left: 1.303912e-03	ci right 1.449466e-03	k: 1389	n:1010000
NLRP6   1010000 perm   637 sec   (1585 perm/sec)   p_kst 1.375248e-03   p_cons 1.087129e-03   p_joint 4.693069e-04

Joint ci ratio: 1.752647e-01	ci left: 4.472370e-04	ci right 5.340718e-04	k: 499	n:1020000
Cons ci ratio: 1.173832e-01	ci left: 1.028036e-03	ci right 1.157176e-03	k: 1113	n:1020000
KS ci ratio: 1.045450e-01	ci left: 1.304495e-03	ci right 1.449341e-03	k: 1403	n:1020000
NLRP6   1020000 perm   647 sec   (1575 perm/sec)   p_kst 1.375490e-03   p_cons 1.091176e-03   p_joint 4.892157e-04

Joint ci ratio: 1.742224e-01	ci left: 4.484654e-04	ci right 5.349664e-04	k: 505	n:1030000
Cons ci ratio: 1.169120e-01	ci left: 1.026537e-03	ci right 1.154936e-03	k: 1122	n:1030000
KS ci ratio: 1.041011e-01	ci left: 1.303176e-03	ci right 1.447224e-03	k: 1415	n:1030000
NLRP6   1030000 perm   658 sec   (1565 perm/sec)   p_kst 1.373786e-03   p_cons 1.089320e-03   p_joint 4.902913e-04

Joint ci ratio: 1.733679e-01	ci left: 4.487518e-04	ci right 5.348391e-04	k: 510	n:1040000
Cons ci ratio: 1.164464e-01	ci left: 1.025068e-03	ci right 1.152737e-03	k: 1131	n:1040000
KS ci ratio: 1.035903e-01	ci left: 1.303758e-03	ci right 1.447119e-03	k: 1429	n:1040000
NLRP6   1040000 perm   669 sec   (1556 perm/sec)   p_kst 1.374038e-03   p_cons 1.087500e-03   p_joint 4.903846e-04

Joint ci ratio: 1.721923e-01	ci left: 4.508564e-04	ci right 5.367000e-04	k: 517	n:1050000
Cons ci ratio: 1.158847e-01	ci left: 1.025477e-03	ci right 1.152539e-03	k: 1142	n:1050000
KS ci ratio: 1.032661e-01	ci left: 1.299690e-03	ci right 1.442131e-03	k: 1438	n:1050000
NLRP6   1050000 perm   679 sec   (1546 perm/sec)   p_kst 1.369524e-03   p_cons 1.087619e-03   p_joint 4.923810e-04

Joint ci ratio: 1.745691e-01	ci left: 4.339683e-04	ci right 5.178571e-04	k: 503	n:1060000
Cons ci ratio: 1.151315e-01	ci left: 1.029545e-03	ci right 1.156225e-03	k: 1157	n:1060000
KS ci ratio: 1.026966e-01	ci left: 1.302135e-03	ci right 1.444008e-03	k: 1454	n:1060000
NLRP6   1060000 perm   690 sec   (1536 perm/sec)   p_kst 1.371698e-03   p_cons 1.091509e-03   p_joint 4.745283e-04

Joint ci ratio: 2.262895e-01	ci left: 2.486634e-04	ci right 3.129710e-04	k: 299	n:1070000
Cons ci ratio: 1.143928e-01	ci left: 1.033540e-03	ci right 1.159840e-03	k: 1172	n:1070000
KS ci ratio: 1.023807e-01	ci left: 1.298161e-03	ci right 1.439140e-03	k: 1463	n:1070000
NLRP6   1070000 perm   701 sec   (1527 perm/sec)   p_kst 1.367290e-03   p_cons 1.095327e-03   p_joint 2.794393e-04

Joint ci ratio: 2.247957e-01	ci left: 2.498555e-04	ci right 3.139857e-04	k: 303	n:1080000
Cons ci ratio: 1.140532e-01	ci left: 1.030266e-03	ci right 1.155768e-03	k: 1179	n:1080000
KS ci ratio: 1.019292e-01	ci left: 1.297870e-03	ci right 1.438159e-03	k: 1476	n:1080000
NLRP6   1080000 perm   712 sec   (1518 perm/sec)   p_kst 1.366667e-03   p_cons 1.091667e-03   p_joint 2.805556e-04

Joint ci ratio: 2.229693e-01	ci left: 2.518932e-04	ci right 3.159490e-04	k: 308	n:1090000
Cons ci ratio: 1.134300e-01	ci left: 1.032401e-03	ci right 1.157430e-03	k: 1192	n:1090000
KS ci ratio: 1.015860e-01	ci left: 1.294904e-03	ci right 1.434373e-03	k: 1486	n:1090000
NLRP6   1090000 perm   723 sec   (1508 perm/sec)   p_kst 1.363303e-03   p_cons 1.093578e-03   p_joint 2.825688e-04

Joint ci ratio: 2.215399e-01	ci left: 2.530372e-04	ci right 3.169152e-04	k: 312	n:1100000
Cons ci ratio: 1.127701e-01	ci left: 1.035383e-03	ci right 1.159995e-03	k: 1206	n:1100000
KS ci ratio: 1.009429e-01	ci left: 1.299967e-03	ci right 1.439043e-03	k: 1505	n:1100000
NLRP6   1100000 perm   734 sec   (1499 perm/sec)   p_kst 1.368182e-03   p_cons 1.096364e-03   p_joint 2.836364e-04

Joint ci ratio: 2.201376e-01	ci left: 2.541619e-04	ci right 3.178627e-04	k: 316	n:1110000
Cons ci ratio: 1.122136e-01	ci left: 1.036562e-03	ci right 1.160659e-03	k: 1218	n:1110000
KS ci ratio: 1.006429e-01	ci left: 1.296160e-03	ci right 1.434391e-03	k: 1514	n:1110000
NLRP6   1110000 perm   745 sec   (1490 perm/sec)   p_kst 1.363964e-03   p_cons 1.097297e-03   p_joint 2.846847e-04

Joint ci ratio: 2.197914e-01	ci left: 2.527362e-04	ci right 3.159666e-04	k: 317	n:1120000
Cons ci ratio: 1.120303e-01	ci left: 1.030778e-03	ci right 1.153968e-03	k: 1222	n:1120000
KS ci ratio: 1.001155e-01	ci left: 1.298514e-03	ci right 1.436228e-03	k: 1530	n:1120000
NLRP6   1120000 perm   756 sec   (1481 perm/sec)   p_kst 1.366071e-03   p_cons 1.091071e-03   p_joint 2.830357e-04

Joint ci ratio: 2.174111e-01	ci left: 2.563552e-04	ci right 3.197037e-04	k: 324	n:1130000
Cons ci ratio: 1.114846e-01	ci left: 1.031979e-03	ci right 1.154672e-03	k: 1234	n:1130000
KS ci ratio: 9.966084e-02	ci left: 1.299103e-03	ci right 1.436217e-03	k: 1544	n:1130000
NLRP6   1130000 perm   767 sec   (1473 perm/sec)   p_kst 1.366372e-03   p_cons 1.092035e-03   p_joint 2.867257e-04

Joint ci ratio: 2.164146e-01	ci left: 2.565951e-04	ci right 3.196736e-04	k: 327	n:1140000
Cons ci ratio: 1.110360e-01	ci left: 1.031454e-03	ci right 1.153559e-03	k: 1244	n:1140000
KS ci ratio: 9.908513e-02	ci left: 1.303104e-03	ci right 1.439800e-03	k: 1562	n:1140000
NLRP6   1140000 perm   779 sec   (1464 perm/sec)   p_kst 1.370175e-03   p_cons 1.091228e-03   p_joint 2.868421e-04

Joint ci ratio: 2.151068e-01	ci left: 2.576542e-04	ci right 3.205598e-04	k: 331	n:1150000
Cons ci ratio: 1.103729e-01	ci left: 1.035168e-03	ci right 1.156933e-03	k: 1259	n:1150000
KS ci ratio: 9.873840e-02	ci left: 1.301101e-03	ci right 1.437082e-03	k: 1573	n:1150000
NLRP6   1150000 perm   790 sec   (1455 perm/sec)   p_kst 1.367826e-03   p_cons 1.094783e-03   p_joint 2.878261e-04

Joint ci ratio: 2.144619e-01	ci left: 2.570644e-04	ci right 3.196131e-04	k: 333	n:1160000
Cons ci ratio: 1.101113e-01	ci left: 1.031273e-03	ci right 1.152274e-03	k: 1265	n:1160000
KS ci ratio: 9.842639e-02	ci left: 1.298293e-03	ci right 1.433527e-03	k: 1583	n:1160000
NLRP6   1160000 perm   802 sec   (1446 perm/sec)   p_kst 1.364655e-03   p_cons 1.090517e-03   p_joint 2.870690e-04

Joint ci ratio: 2.138227e-01	ci left: 2.564850e-04	ci right 3.186823e-04	k: 335	n:1170000
Cons ci ratio: 1.097221e-01	ci left: 1.029940e-03	ci right 1.150330e-03	k: 1274	n:1170000
KS ci ratio: 9.805574e-02	ci left: 1.297201e-03	ci right 1.431783e-03	k: 1595	n:1170000
NLRP6   1170000 perm   814 sec   (1438 perm/sec)   p_kst 1.363248e-03   p_cons 1.088889e-03   p_joint 2.863248e-04

Joint ci ratio: 2.131893e-01	ci left: 2.559157e-04	ci right 3.177670e-04	k: 337	n:1180000
Cons ci ratio: 1.092944e-01	ci left: 1.029454e-03	ci right 1.149288e-03	k: 1284	n:1180000
KS ci ratio: 9.753751e-02	ci left: 1.300262e-03	ci right 1.434408e-03	k: 1612	n:1180000
NLRP6   1180000 perm   825 sec   (1430 perm/sec)   p_kst 1.366102e-03   p_cons 1.088136e-03   p_joint 2.855932e-04

Joint ci ratio: 2.119388e-01	ci left: 2.569476e-04	ci right 3.186367e-04	k: 341	n:1190000
Cons ci ratio: 1.088295e-01	ci left: 1.029795e-03	ci right 1.149126e-03	k: 1295	n:1190000
KS ci ratio: 9.717677e-02	ci left: 1.299174e-03	ci right 1.432684e-03	k: 1624	n:1190000
NLRP6   1190000 perm   837 sec   (1421 perm/sec)   p_kst 1.364706e-03   p_cons 1.088235e-03   p_joint 2.865546e-04

Joint ci ratio: 2.113219e-01	ci left: 2.563847e-04	ci right 3.177363e-04	k: 343	n:1200000
Cons ci ratio: 1.083291e-01	ci left: 1.030942e-03	ci right 1.149821e-03	k: 1307	n:1200000
KS ci ratio: 9.673129e-02	ci left: 1.300545e-03	ci right 1.433548e-03	k: 1639	n:1200000
NLRP6   1200000 perm   849 sec   (1413 perm/sec)   p_kst 1.365833e-03   p_cons 1.089167e-03   p_joint 2.858333e-04

Joint ci ratio: 2.107103e-01	ci left: 2.558313e-04	ci right 3.168505e-04	k: 345	n:1210000
Cons ci ratio: 1.080406e-01	ci left: 1.028050e-03	ci right 1.146260e-03	k: 1314	n:1210000
KS ci ratio: 9.629188e-02	ci left: 1.301894e-03	ci right 1.434396e-03	k: 1654	n:1210000
NLRP6   1210000 perm   861 sec   (1405 perm/sec)   p_kst 1.366942e-03   p_cons 1.085950e-03   p_joint 2.851240e-04

Joint ci ratio: 2.107105e-01	ci left: 2.537343e-04	ci right 3.142534e-04	k: 345	n:1220000
Cons ci ratio: 1.076321e-01	ci left: 1.027599e-03	ci right 1.145282e-03	k: 1324	n:1220000
KS ci ratio: 9.603131e-02	ci left: 1.298422e-03	ci right 1.430193e-03	k: 1663	n:1220000
NLRP6   1220000 perm   874 sec   (1397 perm/sec)   p_kst 1.363115e-03   p_cons 1.085246e-03   p_joint 2.827869e-04

Joint ci ratio: 2.098029e-01	ci left: 2.539820e-04	ci right 3.142657e-04	k: 348	n:1230000
Cons ci ratio: 1.072685e-01	ci left: 1.026365e-03	ci right 1.143485e-03	k: 1333	n:1230000
KS ci ratio: 9.574419e-02	ci left: 1.295801e-03	ci right 1.426891e-03	k: 1673	n:1230000
NLRP6   1230000 perm   886 sec   (1389 perm/sec)   p_kst 1.360163e-03   p_cons 1.083740e-03   p_joint 2.829268e-04

Joint ci ratio: 2.698409e-01	ci left: 1.472242e-04	ci right 1.938727e-04	k: 210	n:1240000
Cons ci ratio: 1.068688e-01	ci left: 1.025936e-03	ci right 1.142543e-03	k: 1343	n:1240000
KS ci ratio: 9.528979e-02	ci left: 1.297946e-03	ci right 1.428595e-03	k: 1689	n:1240000
NLRP6   1240000 perm   898 sec   (1381 perm/sec)   p_kst 1.362097e-03   p_cons 1.083065e-03   p_joint 1.693548e-04

Joint ci ratio: 2.692038e-01	ci left: 1.467924e-04	ci right 1.931757e-04	k: 211	n:1250000
Cons ci ratio: 1.066708e-01	ci left: 1.021622e-03	ci right 1.137510e-03	k: 1348	n:1250000
KS ci ratio: 9.489752e-02	ci left: 1.298496e-03	ci right 1.428632e-03	k: 1703	n:1250000
NLRP6   1250000 perm   910 sec   (1373 perm/sec)   p_kst 1.362400e-03   p_cons 1.078400e-03   p_joint 1.688000e-04

Joint ci ratio: 2.679428e-01	ci left: 1.471078e-04	ci right 1.933365e-04	k: 213	n:1260000
Cons ci ratio: 1.062776e-01	ci left: 1.021239e-03	ci right 1.136630e-03	k: 1358	n:1260000
KS ci ratio: 9.453761e-02	ci left: 1.298263e-03	ci right 1.427856e-03	k: 1716	n:1260000
NLRP6   1260000 perm   923 sec   (1366 perm/sec)   p_kst 1.361905e-03   p_cons 1.077778e-03   p_joint 1.690476e-04

Joint ci ratio: 2.679430e-01	ci left: 1.459495e-04	ci right 1.918141e-04	k: 213	n:1270000
Cons ci ratio: 1.059663e-01	ci left: 1.019330e-03	ci right 1.134146e-03	k: 1366	n:1270000
KS ci ratio: 9.412730e-02	ci left: 1.299573e-03	ci right 1.428702e-03	k: 1731	n:1270000
NLRP6   1270000 perm   935 sec   (1358 perm/sec)   p_kst 1.362992e-03   p_cons 1.075591e-03   p_joint 1.677165e-04

Joint ci ratio: 2.673192e-01	ci left: 1.455381e-04	ci right 1.911491e-04	k: 214	n:1280000
Cons ci ratio: 1.055425e-01	ci left: 1.019732e-03	ci right 1.134107e-03	k: 1377	n:1280000
KS ci ratio: 9.380297e-02	ci left: 1.298575e-03	ci right 1.427136e-03	k: 1743	n:1280000
NLRP6   1280000 perm   948 sec   (1351 perm/sec)   p_kst 1.361719e-03   p_cons 1.075781e-03   p_joint 1.671875e-04

Joint ci ratio: 2.666998e-01	ci left: 1.451332e-04	ci right 1.904943e-04	k: 215	n:1290000
Cons ci ratio: 1.052376e-01	ci left: 1.017866e-03	ci right 1.131680e-03	k: 1385	n:1290000
KS ci ratio: 9.364230e-02	ci left: 1.293051e-03	ci right 1.420833e-03	k: 1749	n:1290000
NLRP6   1290000 perm   960 sec   (1343 perm/sec)   p_kst 1.355814e-03   p_cons 1.073643e-03   p_joint 1.666667e-04

Joint ci ratio: 2.667000e-01	ci left: 1.440167e-04	ci right 1.890290e-04	k: 215	n:1300000
Cons ci ratio: 1.048976e-01	ci left: 1.016777e-03	ci right 1.130080e-03	k: 1394	n:1300000
KS ci ratio: 9.319064e-02	ci left: 1.295876e-03	ci right 1.423286e-03	k: 1766	n:1300000
NLRP6   1300000 perm   973 sec   (1336 perm/sec)   p_kst 1.358462e-03   p_cons 1.072308e-03   p_joint 1.653846e-04

Joint ci ratio: 2.648668e-01	ci left: 1.450549e-04	ci right 1.900283e-04	k: 218	n:1310000
Cons ci ratio: 1.045982e-01	ci left: 1.014962e-03	ci right 1.127720e-03	k: 1402	n:1310000
KS ci ratio: 9.271942e-02	ci left: 1.299404e-03	ci right 1.426481e-03	k: 1784	n:1310000
NLRP6   1310000 perm   986 sec   (1329 perm/sec)   p_kst 1.361832e-03   p_cons 1.070229e-03   p_joint 1.664122e-04

Joint ci ratio: 2.636656e-01	ci left: 1.453708e-04	ci right 1.902040e-04	k: 220	n:1320000
Cons ci ratio: 1.041537e-01	ci left: 1.016127e-03	ci right 1.128505e-03	k: 1414	n:1320000
KS ci ratio: 9.238364e-02	ci left: 1.299181e-03	ci right 1.425750e-03	k: 1797	n:1320000
NLRP6   1320000 perm   999 sec   (1322 perm/sec)   p_kst 1.361364e-03   p_cons 1.071212e-03   p_joint 1.666667e-04

Joint ci ratio: 2.636657e-01	ci left: 1.442778e-04	ci right 1.887739e-04	k: 220	n:1330000
Cons ci ratio: 1.038972e-01	ci left: 1.013613e-03	ci right 1.125420e-03	k: 1421	n:1330000
KS ci ratio: 9.194986e-02	ci left: 1.301900e-03	ci right 1.428107e-03	k: 1814	n:1330000
NLRP6   1330000 perm   1012 sec   (1315 perm/sec)   p_kst 1.363910e-03   p_cons 1.068421e-03   p_joint 1.654135e-04

Joint ci ratio: 2.624807e-01	ci left: 1.445952e-04	ci right 1.889559e-04	k: 222	n:1340000
Cons ci ratio: 1.033894e-01	ci left: 1.016226e-03	ci right 1.127740e-03	k: 1435	n:1340000
KS ci ratio: 9.172289e-02	ci left: 1.298747e-03	ci right 1.424320e-03	k: 1823	n:1340000
NLRP6   1340000 perm   1025 sec   (1308 perm/sec)   p_kst 1.360448e-03   p_cons 1.070896e-03   p_joint 1.656716e-04

Joint ci ratio: 2.618942e-01	ci left: 1.442162e-04	ci right 1.883455e-04	k: 223	n:1350000
Cons ci ratio: 1.030313e-01	ci left: 1.015914e-03	ci right 1.126985e-03	k: 1445	n:1350000
KS ci ratio: 9.152259e-02	ci left: 1.294916e-03	ci right 1.419831e-03	k: 1831	n:1350000
NLRP6   1350000 perm   1038 sec   (1301 perm/sec)   p_kst 1.356296e-03   p_cons 1.070370e-03   p_joint 1.651852e-04

Joint ci ratio: 2.601577e-01	ci left: 1.452173e-04	ci right 1.893105e-04	k: 226	n:1360000
Cons ci ratio: 1.024657e-01	ci left: 1.019907e-03	ci right 1.130765e-03	k: 1461	n:1360000
KS ci ratio: 9.117486e-02	ci left: 1.295454e-03	ci right 1.419921e-03	k: 1845	n:1360000
NLRP6   1360000 perm   1051 sec   (1294 perm/sec)   p_kst 1.356618e-03   p_cons 1.074265e-03   p_joint 1.661765e-04

Joint ci ratio: 2.578952e-01	ci left: 1.468875e-04	ci right 1.910375e-04	k: 230	n:1370000
Cons ci ratio: 1.019094e-01	ci left: 1.023843e-03	ci right 1.134488e-03	k: 1477	n:1370000
KS ci ratio: 9.092903e-02	ci left: 1.293131e-03	ci right 1.417022e-03	k: 1855	n:1370000
NLRP6   1370000 perm   1064 sec   (1287 perm/sec)   p_kst 1.354015e-03   p_cons 1.078102e-03   p_joint 1.678832e-04

Joint ci ratio: 2.567860e-01	ci left: 1.471789e-04	ci right 1.911957e-04	k: 232	n:1380000
Cons ci ratio: 1.016691e-01	ci left: 1.021367e-03	ci right 1.131469e-03	k: 1484	n:1380000
KS ci ratio: 9.063654e-02	ci left: 1.292259e-03	ci right 1.415646e-03	k: 1867	n:1380000
NLRP6   1380000 perm   1078 sec   (1281 perm/sec)   p_kst 1.352899e-03   p_cons 1.075362e-03   p_joint 1.681159e-04

Joint ci ratio: 2.546096e-01	ci left: 1.488134e-04	ci right 1.928819e-04	k: 236	n:1390000
Cons ci ratio: 1.012946e-01	ci left: 1.021732e-03	ci right 1.131443e-03	k: 1495	n:1390000
KS ci ratio: 9.034687e-02	ci left: 1.291399e-03	ci right 1.414290e-03	k: 1879	n:1390000
NLRP6   1390000 perm   1091 sec   (1274 perm/sec)   p_kst 1.351799e-03   p_cons 1.075540e-03   p_joint 1.697842e-04

Joint ci ratio: 2.540742e-01	ci left: 1.484192e-04	ci right 1.922639e-04	k: 237	n:1400000
Cons ci ratio: 1.007570e-01	ci left: 1.025573e-03	ci right 1.135079e-03	k: 1511	n:1400000
KS ci ratio: 9.003612e-02	ci left: 1.291251e-03	ci right 1.413683e-03	k: 1892	n:1400000
NLRP6   1400000 perm   1105 sec   (1267 perm/sec)   p_kst 1.351429e-03   p_cons 1.079286e-03   p_joint 1.692857e-04

Joint ci ratio: 2.530133e-01	ci left: 1.486949e-04	ci right 1.924087e-04	k: 239	n:1410000
Cons ci ratio: 1.003595e-01	ci left: 1.026596e-03	ci right 1.135753e-03	k: 1523	n:1410000
KS ci ratio: 8.972857e-02	ci left: 1.291106e-03	ci right 1.413084e-03	k: 1905	n:1410000
NLRP6   1410000 perm   1119 sec   (1260 perm/sec)   p_kst 1.351064e-03   p_cons 1.080142e-03   p_joint 1.695035e-04

Joint ci ratio: 2.509306e-01	ci left: 1.502868e-04	ci right 1.940481e-04	k: 243	n:1420000
Cons ci ratio: 9.999928e-02	ci left: 1.026919e-03	ci right 1.135695e-03	k: 1534	n:1420000
KS ci ratio: 8.937751e-02	ci left: 1.292341e-03	ci right 1.413933e-03	k: 1920	n:1420000
NLRP6   1420000 perm   1132 sec   (1254 perm/sec)   p_kst 1.352113e-03   p_cons 1.080282e-03   p_joint 1.711268e-04

Joint ci ratio: 2.504181e-01	ci left: 1.498912e-04	ci right 1.934343e-04	k: 244	n:1430000
Cons ci ratio: 9.967516e-02	ci left: 1.026556e-03	ci right 1.134921e-03	k: 1544	n:1430000
KS ci ratio: 8.889272e-02	ci left: 1.297662e-03	ci right 1.419058e-03	k: 1941	n:1430000
NLRP6   1430000 perm   1146 sec   (1248 perm/sec)   p_kst 1.357343e-03   p_cons 1.079720e-03   p_joint 1.706294e-04

Joint ci ratio: 2.499086e-01	ci left: 1.495012e-04	ci right 1.928289e-04	k: 245	n:1440000
Cons ci ratio: 9.938617e-02	ci left: 1.025522e-03	ci right 1.133445e-03	k: 1553	n:1440000
KS ci ratio: 8.857402e-02	ci left: 1.298157e-03	ci right 1.419141e-03	k: 1955	n:1440000
NLRP6   1440000 perm   1160 sec   (1241 perm/sec)   p_kst 1.357639e-03   p_cons 1.078472e-03   p_joint 1.701389e-04

Joint ci ratio: 2.494023e-01	ci left: 1.491167e-04	ci right 1.922318e-04	k: 246	n:1450000
Cons ci ratio: 9.897297e-02	ci left: 1.027193e-03	ci right 1.134816e-03	k: 1566	n:1450000
KS ci ratio: 8.834857e-02	ci left: 1.295948e-03	ci right 1.416403e-03	k: 1965	n:1450000
NLRP6   1450000 perm   1174 sec   (1235 perm/sec)   p_kst 1.355172e-03   p_cons 1.080000e-03   p_joint 1.696552e-04

Joint ci ratio: 2.483986e-01	ci left: 1.493797e-04	ci right 1.923702e-04	k: 248	n:1460000
Cons ci ratio: 9.862740e-02	ci left: 1.027505e-03	ci right 1.134764e-03	k: 1577	n:1460000
KS ci ratio: 8.803566e-02	ci left: 1.296449e-03	ci right 1.416502e-03	k: 1979	n:1460000
NLRP6   1460000 perm   1188 sec   (1229 perm/sec)   p_kst 1.355479e-03   p_cons 1.080137e-03   p_joint 1.698630e-04

Joint ci ratio: 2.479014e-01	ci left: 1.490015e-04	ci right 1.917841e-04	k: 249	n:1470000
Cons ci ratio: 9.831640e-02	ci left: 1.027150e-03	ci right 1.134015e-03	k: 1587	n:1470000
KS ci ratio: 8.779221e-02	ci left: 1.294948e-03	ci right 1.414513e-03	k: 1990	n:1470000
NLRP6   1470000 perm   1203 sec   (1222 perm/sec)   p_kst 1.353741e-03   p_cons 1.079592e-03   p_joint 1.693878e-04

Joint ci ratio: 2.464271e-01	ci left: 1.498962e-04	ci right 1.926406e-04	k: 252	n:1480000
Cons ci ratio: 9.797764e-02	ci left: 1.027460e-03	ci right 1.133967e-03	k: 1598	n:1480000
KS ci ratio: 8.759459e-02	ci left: 1.292146e-03	ci right 1.411170e-03	k: 1999	n:1480000
NLRP6   1480000 perm   1217 sec   (1216 perm/sec)   p_kst 1.350676e-03   p_cons 1.079730e-03   p_joint 1.702703e-04

Joint ci ratio: 2.464273e-01	ci left: 1.488902e-04	ci right 1.913477e-04	k: 252	n:1490000
Cons ci ratio: 9.761201e-02	ci left: 1.028421e-03	ci right 1.134607e-03	k: 1610	n:1490000
KS ci ratio: 8.731130e-02	ci left: 1.292008e-03	ci right 1.410615e-03	k: 2012	n:1490000
NLRP6   1490000 perm   1232 sec   (1210 perm/sec)   p_kst 1.350336e-03   p_cons 1.080537e-03   p_joint 1.691275e-04

Joint ci ratio: 2.449790e-01	ci left: 1.497745e-04	ci right 1.921949e-04	k: 255	n:1500000
Cons ci ratio: 9.728045e-02	ci left: 1.028720e-03	ci right 1.134555e-03	k: 1621	n:1500000
KS ci ratio: 8.707379e-02	ci left: 1.290568e-03	ci right 1.408704e-03	k: 2023	n:1500000
NLRP6   1500000 perm   1246 sec   (1204 perm/sec)   p_kst 1.348667e-03   p_cons 1.080667e-03   p_joint 1.700000e-04

Joint ci ratio: 2.449791e-01	ci left: 1.487826e-04	ci right 1.909221e-04	k: 255	n:1510000
Cons ci ratio: 9.701173e-02	ci left: 1.027722e-03	ci right 1.133147e-03	k: 1630	n:1510000
KS ci ratio: 8.683821e-02	ci left: 1.289147e-03	ci right 1.406818e-03	k: 2034	n:1510000
NLRP6   1510000 perm   1261 sec   (1198 perm/sec)   p_kst 1.347020e-03   p_cons 1.079470e-03   p_joint 1.688742e-04

Joint ci ratio: 2.440277e-01	ci left: 1.490389e-04	ci right 1.910623e-04	k: 257	n:1520000
Cons ci ratio: 9.662734e-02	ci left: 1.029307e-03	ci right 1.134451e-03	k: 1643	n:1520000
KS ci ratio: 8.643548e-02	ci left: 1.292895e-03	ci right 1.410334e-03	k: 2053	n:1520000
NLRP6   1520000 perm   1275 sec   (1192 perm/sec)   p_kst 1.350658e-03   p_cons 1.080921e-03   p_joint 1.690789e-04

Joint ci ratio: 1.877071e-01	ci left: 2.582235e-04	ci right 3.123250e-04	k: 435	n:1530000
Cons ci ratio: 9.630568e-02	ci left: 1.029595e-03	ci right 1.134399e-03	k: 1654	n:1530000
KS ci ratio: 8.614240e-02	ci left: 1.293398e-03	ci right 1.410463e-03	k: 2067	n:1530000
NLRP6   1530000 perm   1290 sec   (1186 perm/sec)   p_kst 1.350980e-03   p_cons 1.081046e-03   p_joint 2.843137e-04

Joint ci ratio: 1.421582e-01	ci left: 4.584210e-04	ci right 5.291938e-04	k: 759	n:1540000
Cons ci ratio: 9.613173e-02	ci left: 1.026712e-03	ci right 1.131023e-03	k: 1660	n:1540000
KS ci ratio: 8.589359e-02	ci left: 1.292624e-03	ci right 1.409264e-03	k: 2079	n:1540000
NLRP6   1540000 perm   1305 sec   (1180 perm/sec)   p_kst 1.350000e-03   p_cons 1.077922e-03   p_joint 4.928571e-04

Joint ci ratio: 1.419717e-01	ci left: 4.567079e-04	ci right 5.271159e-04	k: 761	n:1550000
Cons ci ratio: 9.592992e-02	ci left: 1.024496e-03	ci right 1.128351e-03	k: 1667	n:1550000
KS ci ratio: 8.572904e-02	ci left: 1.289335e-03	ci right 1.405444e-03	k: 2087	n:1550000
NLRP6   1550000 perm   1320 sec   (1174 perm/sec)   p_kst 1.346452e-03   p_cons 1.075484e-03   p_joint 4.909677e-04

Joint ci ratio: 1.416005e-01	ci left: 4.562534e-04	ci right 5.263919e-04	k: 765	n:1560000
Cons ci ratio: 9.572938e-02	ci left: 1.022308e-03	ci right 1.125713e-03	k: 1674	n:1560000
KS ci ratio: 8.550418e-02	ci left: 1.287970e-03	ci right 1.403637e-03	k: 2098	n:1560000
NLRP6   1560000 perm   1335 sec   (1168 perm/sec)   p_kst 1.344872e-03   p_cons 1.073077e-03   p_joint 4.903846e-04

Joint ci ratio: 1.412323e-01	ci left: 4.558049e-04	ci right 5.256770e-04	k: 769	n:1570000
Cons ci ratio: 9.547328e-02	ci left: 1.021392e-03	ci right 1.124412e-03	k: 1683	n:1570000
KS ci ratio: 8.528108e-02	ci left: 1.286623e-03	ci right 1.401853e-03	k: 2109	n:1570000
NLRP6   1570000 perm   1351 sec   (1162 perm/sec)   p_kst 1.343312e-03   p_cons 1.071975e-03   p_joint 4.898089e-04

Joint ci ratio: 1.407760e-01	ci left: 4.559730e-04	ci right 5.256260e-04	k: 774	n:1580000
Cons ci ratio: 9.513488e-02	ci left: 1.022341e-03	ci right 1.125071e-03	k: 1695	n:1580000
KS ci ratio: 8.503964e-02	ci left: 1.285913e-03	ci right 1.400737e-03	k: 2121	n:1580000
NLRP6   1580000 perm   1366 sec   (1156 perm/sec)   p_kst 1.342405e-03   p_cons 1.072785e-03   p_joint 4.898734e-04

Joint ci ratio: 1.839484e-01	ci left: 2.592734e-04	ci right 3.123859e-04	k: 453	n:1590000
Cons ci ratio: 9.488351e-02	ci left: 1.021437e-03	ci right 1.123790e-03	k: 1704	n:1590000
KS ci ratio: 8.491987e-02	ci left: 1.281519e-03	ci right 1.395781e-03	k: 2127	n:1590000
NLRP6   1590000 perm   1381 sec   (1151 perm/sec)   p_kst 1.337736e-03   p_cons 1.071698e-03   p_joint 2.849057e-04

Joint ci ratio: 1.835446e-01	ci left: 2.588455e-04	ci right 3.117409e-04	k: 455	n:1600000
Cons ci ratio: 9.460650e-02	ci left: 1.021155e-03	ci right 1.123165e-03	k: 1714	n:1600000
KS ci ratio: 8.480060e-02	ci left: 1.277180e-03	ci right 1.390888e-03	k: 2133	n:1600000
NLRP6   1600000 perm   1397 sec   (1145 perm/sec)   p_kst 1.333125e-03   p_cons 1.071250e-03   p_joint 2.843750e-04

Joint ci ratio: 1.819551e-01	ci left: 2.619794e-04	ci right 3.150006e-04	k: 463	n:1610000
Cons ci ratio: 9.424990e-02	ci left: 1.022696e-03	ci right 1.124454e-03	k: 1727	n:1610000
KS ci ratio: 8.448440e-02	ci left: 1.278975e-03	ci right 1.392397e-03	k: 2149	n:1610000
NLRP6   1610000 perm   1412 sec   (1140 perm/sec)   p_kst 1.334783e-03   p_cons 1.072671e-03   p_joint 2.875776e-04

Joint ci ratio: 1.811758e-01	ci left: 2.627192e-04	ci right 3.156374e-04	k: 467	n:1620000
Cons ci ratio: 9.403256e-02	ci left: 1.021206e-03	ci right 1.122567e-03	k: 1735	n:1620000
KS ci ratio: 8.436695e-02	ci left: 1.274705e-03	ci right 1.387584e-03	k: 2155	n:1620000
NLRP6   1620000 perm   1428 sec   (1135 perm/sec)   p_kst 1.330247e-03   p_cons 1.070988e-03   p_joint 2.882716e-04

Joint ci ratio: 1.807900e-01	ci left: 2.622788e-04	ci right 3.149835e-04	k: 469	n:1630000
Cons ci ratio: 9.378980e-02	ci left: 1.020332e-03	ci right 1.121331e-03	k: 1744	n:1630000
KS ci ratio: 8.409434e-02	ci left: 1.275293e-03	ci right 1.387841e-03	k: 2169	n:1630000
NLRP6   1630000 perm   1443 sec   (1129 perm/sec)   p_kst 1.330675e-03   p_cons 1.069939e-03   p_joint 2.877301e-04

Joint ci ratio: 1.804066e-01	ci left: 2.618439e-04	ci right 3.143374e-04	k: 471	n:1640000
Cons ci ratio: 9.349557e-02	ci left: 1.020661e-03	ci right 1.121358e-03	k: 1755	n:1640000
KS ci ratio: 8.380515e-02	ci left: 1.276471e-03	ci right 1.388716e-03	k: 2184	n:1640000
NLRP6   1640000 perm   1459 sec   (1124 perm/sec)   p_kst 1.331707e-03   p_cons 1.070122e-03   p_joint 2.871951e-04

Joint ci ratio: 1.796469e-01	ci left: 2.625720e-04	ci right 3.149657e-04	k: 475	n:1650000
Cons ci ratio: 9.328340e-02	ci left: 1.019210e-03	ci right 1.119524e-03	k: 1763	n:1650000
KS ci ratio: 8.351892e-02	ci left: 1.277636e-03	ci right 1.389581e-03	k: 2199	n:1650000
NLRP6   1650000 perm   1475 sec   (1119 perm/sec)   p_kst 1.332727e-03   p_cons 1.068485e-03   p_joint 2.878788e-04

Joint ci ratio: 1.792708e-01	ci left: 2.621409e-04	ci right 3.143272e-04	k: 477	n:1660000
Cons ci ratio: 9.296768e-02	ci left: 1.020131e-03	ci right 1.120177e-03	k: 1775	n:1660000
KS ci ratio: 8.321680e-02	ci left: 1.279377e-03	ci right 1.391049e-03	k: 2215	n:1660000
NLRP6   1660000 perm   1491 sec   (1113 perm/sec)   p_kst 1.334337e-03   p_cons 1.069277e-03   p_joint 2.873494e-04

Joint ci ratio: 1.783403e-01	ci left: 2.634313e-04	ci right 3.155729e-04	k: 482	n:1670000
Cons ci ratio: 9.260332e-02	ci left: 1.022211e-03	ci right 1.122047e-03	k: 1789	n:1670000
KS ci ratio: 8.280655e-02	ci left: 1.284616e-03	ci right 1.396167e-03	k: 2237	n:1670000
NLRP6   1670000 perm   1507 sec   (1108 perm/sec)   p_kst 1.339521e-03   p_cons 1.071257e-03   p_joint 2.886228e-04

Joint ci ratio: 1.774242e-01	ci left: 2.647069e-04	ci right 3.168030e-04	k: 487	n:1680000
Cons ci ratio: 9.232008e-02	ci left: 1.022523e-03	ci right 1.122067e-03	k: 1800	n:1680000
KS ci ratio: 8.260386e-02	ci left: 1.283382e-03	ci right 1.394539e-03	k: 2248	n:1680000
NLRP6   1680000 perm   1523 sec   (1103 perm/sec)   p_kst 1.338095e-03   p_cons 1.071429e-03   p_joint 2.898810e-04

Joint ci ratio: 1.768814e-01	ci left: 2.648370e-04	ci right 3.167822e-04	k: 490	n:1690000
Cons ci ratio: 9.206486e-02	ci left: 1.022253e-03	ci right 1.121481e-03	k: 1810	n:1690000
KS ci ratio: 8.232972e-02	ci left: 1.284480e-03	ci right 1.395346e-03	k: 2263	n:1690000
NLRP6   1690000 perm   1539 sec   (1098 perm/sec)   p_kst 1.339053e-03   p_cons 1.071006e-03   p_joint 2.899408e-04

Joint ci ratio: 1.761652e-01	ci left: 2.655282e-04	ci right 3.173756e-04	k: 494	n:1700000
Cons ci ratio: 9.176131e-02	ci left: 1.023137e-03	ci right 1.122105e-03	k: 1822	n:1700000
KS ci ratio: 8.213050e-02	ci left: 1.283262e-03	ci right 1.393742e-03	k: 2274	n:1700000
NLRP6   1700000 perm   1555 sec   (1093 perm/sec)   p_kst 1.337647e-03   p_cons 1.071765e-03   p_joint 2.905882e-04

Joint ci ratio: 1.754576e-01	ci left: 2.662116e-04	ci right 3.179616e-04	k: 498	n:1710000
Cons ci ratio: 9.156071e-02	ci left: 1.021724e-03	ci right 1.120329e-03	k: 1830	n:1710000
KS ci ratio: 8.193271e-02	ci left: 1.282058e-03	ci right 1.392156e-03	k: 2285	n:1710000
NLRP6   1710000 perm   1571 sec   (1089 perm/sec)   p_kst 1.336257e-03   p_cons 1.070175e-03   p_joint 2.912281e-04

Joint ci ratio: 1.749326e-01	ci left: 2.663316e-04	ci right 3.179336e-04	k: 501	n:1720000
Cons ci ratio: 9.136141e-02	ci left: 1.020329e-03	ci right 1.118573e-03	k: 1838	n:1720000
KS ci ratio: 8.166518e-02	ci left: 1.283147e-03	ci right 1.392961e-03	k: 2300	n:1720000
NLRP6   1720000 perm   1587 sec   (1084 perm/sec)   p_kst 1.337209e-03   p_cons 1.068605e-03   p_joint 2.912791e-04

Joint ci ratio: 1.738963e-01	ci left: 2.681089e-04	ci right 3.197152e-04	k: 507	n:1730000
Cons ci ratio: 9.104013e-02	ci left: 1.021774e-03	ci right 1.119793e-03	k: 1851	n:1730000
KS ci ratio: 8.131241e-02	ci left: 1.287055e-03	ci right 1.396706e-03	k: 2320	n:1730000
NLRP6   1730000 perm   1604 sec   (1079 perm/sec)   p_kst 1.341040e-03   p_cons 1.069942e-03   p_joint 2.930636e-04

Joint ci ratio: 1.738964e-01	ci left: 2.665681e-04	ci right 3.178778e-04	k: 507	n:1740000
Cons ci ratio: 9.074657e-02	ci left: 1.022642e-03	ci right 1.120410e-03	k: 1863	n:1740000
KS ci ratio: 8.112047e-02	ci left: 1.285852e-03	ci right 1.395129e-03	k: 2331	n:1740000
NLRP6   1740000 perm   1620 sec   (1074 perm/sec)   p_kst 1.339655e-03   p_cons 1.070690e-03   p_joint 2.913793e-04

Joint ci ratio: 1.737256e-01	ci left: 2.655914e-04	ci right 3.166577e-04	k: 508	n:1750000
Cons ci ratio: 9.060100e-02	ci left: 1.020149e-03	ci right 1.117515e-03	k: 1869	n:1750000
KS ci ratio: 8.094718e-02	ci left: 1.284103e-03	ci right 1.392987e-03	k: 2341	n:1750000
NLRP6   1750000 perm   1637 sec   (1069 perm/sec)   p_kst 1.337714e-03   p_cons 1.068000e-03   p_joint 2.902857e-04

Joint ci ratio: 1.735553e-01	ci left: 2.646258e-04	ci right 3.154513e-04	k: 509	n:1760000
Cons ci ratio: 9.052861e-02	ci left: 1.016018e-03	ci right 1.112908e-03	k: 1872	n:1760000
KS ci ratio: 8.065489e-02	ci left: 1.286271e-03	ci right 1.394926e-03	k: 2358	n:1760000
NLRP6   1760000 perm   1654 sec   (1064 perm/sec)   p_kst 1.339773e-03   p_cons 1.063636e-03   p_joint 2.892045e-04

Joint ci ratio: 1.732161e-01	ci left: 2.642117e-04	ci right 3.148481e-04	k: 511	n:1770000
Cons ci ratio: 9.033596e-02	ci left: 1.014696e-03	ci right 1.111243e-03	k: 1880	n:1770000
KS ci ratio: 8.056975e-02	ci left: 1.281771e-03	ci right 1.389927e-03	k: 2363	n:1770000
NLRP6   1770000 perm   1670 sec   (1060 perm/sec)   p_kst 1.335028e-03   p_cons 1.062147e-03   p_joint 2.887006e-04

Joint ci ratio: 1.725433e-01	ci left: 2.648773e-04	ci right 3.154236e-04	k: 515	n:1780000
Cons ci ratio: 9.007296e-02	ci left: 1.015035e-03	ci right 1.111319e-03	k: 1891	n:1780000
KS ci ratio: 8.021408e-02	ci left: 1.286131e-03	ci right 1.394153e-03	k: 2384	n:1780000
NLRP6   1780000 perm   1687 sec   (1055 perm/sec)   p_kst 1.339326e-03   p_cons 1.062360e-03   p_joint 2.893258e-04

Joint ci ratio: 1.723765e-01	ci left: 2.639321e-04	ci right 3.142442e-04	k: 516	n:1790000
Cons ci ratio: 8.990689e-02	ci left: 1.013187e-03	ci right 1.109109e-03	k: 1898	n:1790000
KS ci ratio: 8.006326e-02	ci left: 1.283873e-03	ci right 1.391494e-03	k: 2393	n:1790000
NLRP6   1790000 perm   1705 sec   (1050 perm/sec)   p_kst 1.336872e-03   p_cons 1.060335e-03   p_joint 2.882682e-04

Joint ci ratio: 1.723766e-01	ci left: 2.624658e-04	ci right 3.124984e-04	k: 516	n:1800000
Cons ci ratio: 8.978890e-02	ci left: 1.010274e-03	ci right 1.105788e-03	k: 1903	n:1800000
KS ci ratio: 7.978041e-02	ci left: 1.285996e-03	ci right 1.393396e-03	k: 2410	n:1800000
NLRP6   1800000 perm   1722 sec   (1045 perm/sec)   p_kst 1.338889e-03   p_cons 1.057222e-03   p_joint 2.866667e-04

Joint ci ratio: 1.718786e-01	ci left: 2.626017e-04	ci right 3.125007e-04	k: 519	n:1810000
Cons ci ratio: 8.953064e-02	ci left: 1.010633e-03	ci right 1.105892e-03	k: 1914	n:1810000
KS ci ratio: 7.956620e-02	ci left: 1.285930e-03	ci right 1.393023e-03	k: 2423	n:1810000
NLRP6   1810000 perm   1739 sec   (1041 perm/sec)   p_kst 1.338674e-03   p_cons 1.057459e-03   p_joint 2.867403e-04

Joint ci ratio: 1.713850e-01	ci left: 2.627364e-04	ci right 3.125027e-04	k: 522	n:1820000
Cons ci ratio: 8.913572e-02	ci left: 1.014212e-03	ci right 1.109365e-03	k: 1931	n:1820000
KS ci ratio: 7.941900e-02	ci left: 1.283712e-03	ci right 1.390413e-03	k: 2432	n:1820000
NLRP6   1820000 perm   1756 sec   (1036 perm/sec)   p_kst 1.336264e-03   p_cons 1.060989e-03   p_joint 2.868132e-04

Joint ci ratio: 1.710582e-01	ci left: 2.623467e-04	ci right 3.119348e-04	k: 524	n:1830000
Cons ci ratio: 8.897476e-02	ci left: 1.012410e-03	ci right 1.107213e-03	k: 1938	n:1830000
KS ci ratio: 7.915908e-02	ci left: 1.285267e-03	ci right 1.391731e-03	k: 2448	n:1830000
NLRP6   1830000 perm   1774 sec   (1032 perm/sec)   p_kst 1.337705e-03   p_cons 1.059016e-03   p_joint 2.863388e-04

Joint ci ratio: 1.707334e-01	ci left: 2.619614e-04	ci right 3.113729e-04	k: 526	n:1840000
Cons ci ratio: 8.874623e-02	ci left: 1.012222e-03	ci right 1.106751e-03	k: 1948	n:1840000
KS ci ratio: 7.893378e-02	ci left: 1.285740e-03	ci right 1.391927e-03	k: 2462	n:1840000
NLRP6   1840000 perm   1791 sec   (1027 perm/sec)   p_kst 1.338043e-03   p_cons 1.058696e-03   p_joint 2.858696e-04

Joint ci ratio: 1.705717e-01	ci left: 2.610628e-04	ci right 3.102534e-04	k: 527	n:1850000
Cons ci ratio: 8.847424e-02	ci left: 1.013093e-03	ci right 1.107399e-03	k: 1960	n:1850000
KS ci ratio: 7.872629e-02	ci left: 1.285678e-03	ci right 1.391568e-03	k: 2475	n:1850000
NLRP6   1850000 perm   1809 sec   (1023 perm/sec)   p_kst 1.337838e-03   p_cons 1.059459e-03   p_joint 2.848649e-04

Joint ci ratio: 1.700892e-01	ci left: 2.612034e-04	ci right 3.102670e-04	k: 530	n:1860000
Cons ci ratio: 8.829439e-02	ci left: 1.011853e-03	ci right 1.105841e-03	k: 1968	n:1860000
KS ci ratio: 7.839439e-02	ci left: 1.289835e-03	ci right 1.395599e-03	k: 2496	n:1860000
NLRP6   1860000 perm   1826 sec   (1018 perm/sec)   p_kst 1.341935e-03   p_cons 1.058065e-03   p_joint 2.849462e-04

Joint ci ratio: 1.694521e-01	ci left: 2.618548e-04	ci right 3.108376e-04	k: 534	n:1870000
Cons ci ratio: 8.800429e-02	ci left: 1.013240e-03	ci right 1.107033e-03	k: 1981	n:1870000
KS ci ratio: 7.812881e-02	ci left: 1.291850e-03	ci right 1.397404e-03	k: 2513	n:1870000
NLRP6   1870000 perm   1844 sec   (1014 perm/sec)   p_kst 1.343850e-03   p_cons 1.059358e-03   p_joint 2.855615e-04

Joint ci ratio: 1.691363e-01	ci left: 2.614807e-04	ci right 3.102931e-04	k: 536	n:1880000
Cons ci ratio: 8.784938e-02	ci left: 1.011492e-03	ci right 1.104949e-03	k: 1988	n:1880000
KS ci ratio: 7.792759e-02	ci left: 1.291759e-03	ci right 1.397021e-03	k: 2526	n:1880000
NLRP6   1880000 perm   1862 sec   (1010 perm/sec)   p_kst 1.343617e-03   p_cons 1.057447e-03   p_joint 2.851064e-04

Joint ci ratio: 1.686658e-01	ci left: 2.616174e-04	ci right 3.103057e-04	k: 539	n:1890000
Cons ci ratio: 8.769528e-02	ci left: 1.009763e-03	ci right 1.102888e-03	k: 1995	n:1890000
KS ci ratio: 7.774325e-02	ci left: 1.291150e-03	ci right 1.396102e-03	k: 2538	n:1890000
NLRP6   1890000 perm   1880 sec   (1005 perm/sec)   p_kst 1.342857e-03   p_cons 1.055556e-03   p_joint 2.851852e-04

Joint ci ratio: 1.685099e-01	ci left: 2.607446e-04	ci right 3.092210e-04	k: 540	n:1900000
Cons ci ratio: 8.752013e-02	ci left: 1.008566e-03	ci right 1.101386e-03	k: 2003	n:1900000
KS ci ratio: 7.762117e-02	ci left: 1.288483e-03	ci right 1.393047e-03	k: 2546	n:1900000
NLRP6   1900000 perm   1898 sec   (1001 perm/sec)   p_kst 1.340000e-03   p_cons 1.054211e-03   p_joint 2.842105e-04

Joint ci ratio: 1.683545e-01	ci left: 2.598809e-04	ci right 3.081477e-04	k: 541	n:1910000
Cons ci ratio: 8.715111e-02	ci left: 1.011992e-03	ci right 1.104715e-03	k: 2020	n:1910000
KS ci ratio: 7.740871e-02	ci left: 1.288925e-03	ci right 1.393225e-03	k: 2560	n:1910000
NLRP6   1910000 perm   1916 sec   (997 perm/sec)   p_kst 1.340314e-03   p_cons 1.057592e-03   p_joint 2.832461e-04

Joint ci ratio: 1.677366e-01	ci left: 2.605231e-04	ci right 3.087136e-04	k: 545	n:1920000
Cons ci ratio: 8.695774e-02	ci left: 1.011307e-03	ci right 1.103750e-03	k: 2029	n:1920000
KS ci ratio: 7.727314e-02	ci left: 1.286808e-03	ci right 1.390747e-03	k: 2569	n:1920000
NLRP6   1920000 perm   1934 sec   (993 perm/sec)   p_kst 1.338021e-03   p_cons 1.056771e-03   p_joint 2.838542e-04

Joint ci ratio: 1.674303e-01	ci left: 2.601660e-04	ci right 3.081937e-04	k: 547	n:1930000
Cons ci ratio: 8.680828e-02	ci left: 1.009615e-03	ci right 1.101737e-03	k: 2036	n:1930000
KS ci ratio: 7.704858e-02	ci left: 1.287763e-03	ci right 1.391463e-03	k: 2584	n:1930000
NLRP6   1930000 perm   1953 sec   (988 perm/sec)   p_kst 1.338860e-03   p_cons 1.054922e-03   p_joint 2.834197e-04

Joint ci ratio: 1.669739e-01	ci left: 2.603066e-04	ci right 3.082161e-04	k: 550	n:1940000
Cons ci ratio: 8.665958e-02	ci left: 1.007941e-03	ci right 1.099745e-03	k: 2043	n:1940000
KS ci ratio: 7.687039e-02	ci left: 1.287191e-03	ci right 1.390595e-03	k: 2596	n:1940000
NLRP6   1940000 perm   1971 sec   (984 perm/sec)   p_kst 1.338144e-03   p_cons 1.053093e-03   p_joint 2.835052e-04

Joint ci ratio: 1.665211e-01	ci left: 2.604460e-04	ci right 3.082381e-04	k: 553	n:1950000
Cons ci ratio: 8.644839e-02	ci left: 1.007789e-03	ci right 1.099344e-03	k: 2053	n:1950000
KS ci ratio: 7.669344e-02	ci left: 1.286626e-03	ci right 1.389736e-03	k: 2608	n:1950000
NLRP6   1950000 perm   1990 sec   (980 perm/sec)   p_kst 1.337436e-03   p_cons 1.052821e-03   p_joint 2.835897e-04

Joint ci ratio: 1.660721e-01	ci left: 2.605841e-04	ci right 3.082598e-04	k: 556	n:1960000
Cons ci ratio: 8.607190e-02	ci left: 1.011633e-03	ci right 1.103117e-03	k: 2071	n:1960000
KS ci ratio: 7.645929e-02	ci left: 1.288069e-03	ci right 1.390965e-03	k: 2624	n:1960000
NLRP6   1960000 perm   2008 sec   (976 perm/sec)   p_kst 1.338776e-03   p_cons 1.056633e-03   p_joint 2.836735e-04

Joint ci ratio: 1.659233e-01	ci left: 2.597478e-04	ci right 3.072237e-04	k: 557	n:1970000
Cons ci ratio: 8.592696e-02	ci left: 1.009975e-03	ci right 1.101147e-03	k: 2078	n:1970000
KS ci ratio: 7.632864e-02	ci left: 1.286012e-03	ci right 1.388560e-03	k: 2633	n:1970000
NLRP6   1970000 perm   2027 sec   (972 perm/sec)   p_kst 1.336548e-03   p_cons 1.054822e-03   p_joint 2.827411e-04

Joint ci ratio: 1.657749e-01	ci left: 2.589201e-04	ci right 3.061981e-04	k: 558	n:1980000
Cons ci ratio: 8.584456e-02	ci left: 1.006850e-03	ci right 1.097649e-03	k: 2082	n:1980000
KS ci ratio: 7.615539e-02	ci left: 1.285462e-03	ci right 1.387723e-03	k: 2645	n:1980000
NLRP6   1980000 perm   2046 sec   (968 perm/sec)   p_kst 1.335859e-03   p_cons 1.051515e-03   p_joint 2.818182e-04

Joint ci ratio: 1.260933e-01	ci left: 4.548145e-04	ci right 5.165035e-04	k: 965	n:1990000
Cons ci ratio: 8.549624e-02	ci left: 1.010151e-03	ci right 1.100859e-03	k: 2099	n:1990000
KS ci ratio: 7.588333e-02	ci left: 1.288368e-03	ci right 1.390479e-03	k: 2664	n:1990000
NLRP6   1990000 perm   2065 sec   (964 perm/sec)   p_kst 1.338693e-03   p_cons 1.054774e-03   p_joint 4.849246e-04

Joint ci ratio: 1.646011e-01	ci left: 2.601655e-04	ci right 3.073013e-04	k: 566	n:2000000
Cons ci ratio: 8.529342e-02	ci left: 1.009993e-03	ci right 1.100462e-03	k: 2109	n:2000000
KS ci ratio: 7.569893e-02	ci left: 1.288303e-03	ci right 1.390149e-03	k: 2677	n:2000000
NLRP6   2000000 perm   2084 sec   (960 perm/sec)   p_kst 1.338500e-03   p_cons 1.054500e-03   p_joint 2.830000e-04

Joint ci ratio: 1.644563e-01	ci left: 2.593482e-04	ci right 3.062904e-04	k: 567	n:2010000
Cons ci ratio: 8.519266e-02	ci left: 1.007403e-03	ci right 1.097527e-03	k: 2114	n:2010000
KS ci ratio: 7.554398e-02	ci left: 1.287263e-03	ci right 1.388809e-03	k: 2688	n:2010000
NLRP6   2010000 perm   2103 sec   (956 perm/sec)   p_kst 1.337313e-03   p_cons 1.051741e-03   p_joint 2.820896e-04

Joint ci ratio: 1.638802e-01	ci left: 2.599631e-04	ci right 3.068356e-04	k: 571	n:2020000
Cons ci ratio: 8.501200e-02	ci left: 1.006776e-03	ci right 1.096644e-03	k: 2123	n:2020000
KS ci ratio: 7.536204e-02	ci left: 1.287205e-03	ci right 1.388491e-03	k: 2701	n:2020000
NLRP6   2020000 perm   2121 sec   (952 perm/sec)   p_kst 1.337129e-03   p_cons 1.050990e-03   p_joint 2.826733e-04

Joint ci ratio: 1.631685e-01	ci left: 2.610448e-04	ci right 3.078878e-04	k: 576	n:2030000
Cons ci ratio: 8.471331e-02	ci left: 1.009049e-03	ci right 1.098788e-03	k: 2138	n:2030000
KS ci ratio: 7.511218e-02	ci left: 1.289564e-03	ci right 1.390685e-03	k: 2719	n:2030000
NLRP6   2030000 perm   2140 sec   (948 perm/sec)   p_kst 1.339409e-03   p_cons 1.053202e-03   p_joint 2.837438e-04

Joint ci ratio: 9.065643e-02	ci left: 8.741665e-04	ci right 9.576529e-04	k: 1867	n:2040000
Cons ci ratio: 8.449631e-02	ci left: 1.009381e-03	ci right 1.098908e-03	k: 2149	n:2040000
KS ci ratio: 7.486479e-02	ci left: 1.291901e-03	ci right 1.392857e-03	k: 2737	n:2040000
NLRP6   2040000 perm   2160 sec   (945 perm/sec)   p_kst 1.341667e-03   p_cons 1.053431e-03   p_joint 9.151961e-04

Outputting figure to mutsig2_images.part000000000115/NLRP6.2_2710_2040000_0.0013417_0.0010534_0.0009152.png
                gene_name: NLRP6
               theta_stop: 0.091 
                    nperm: 2040000 
                     p_ks: 0.0013 
        ci_ks_bounds_left: 0.0013 
       ci_ks_bounds_right: 0.0014 
                   p_cons: 0.0011 
      ci_cons_bounds_left: 0.0010 
     ci_cons_bounds_right: 0.0011 
                  p_joint: 0.00092 
     ci_joint_bounds_left: 0.00087 
    ci_joint_bounds_right: 0.00096 

Current progress: 86 percent done.
NLRP8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.723172e-01	ci left: 4.494682e-02	ci right 5.351821e-02	k: 491	n:10000
Cons ci ratio: 2.138699e-01	ci left: 2.901644e-02	ci right 3.605933e-02	k: 324	n:10000
KS ci ratio: 8.618673e-02	ci left: 1.639619e-01	ci right 1.788300e-01	k: 1713	n:10000
NLRP8   10000 perm   2 sec   (5388 perm/sec)   p_kst 1.713000e-01   p_cons 3.240000e-02   p_joint 4.910000e-02

Joint ci ratio: 1.839540e-01	ci left: 2.015504e-02	ci right 2.428549e-02	k: 443	n:20000
Cons ci ratio: 1.407181e-01	ci left: 3.471622e-02	ci right 4.001937e-02	k: 746	n:20000
KS ci ratio: 6.083705e-02	ci left: 1.666447e-01	ci right 1.771509e-01	k: 3437	n:20000
NLRP8   20000 perm   4 sec   (4780 perm/sec)   p_kst 1.718500e-01   p_cons 3.730000e-02   p_joint 2.215000e-02

Joint ci ratio: 1.459945e-01	ci left: 2.175113e-02	ci right 2.520867e-02	k: 703	n:30000
Cons ci ratio: 1.139233e-01	ci left: 3.579979e-02	ci right 4.015694e-02	k: 1138	n:30000
KS ci ratio: 4.934452e-02	ci left: 1.694941e-01	ci right 1.781025e-01	k: 5213	n:30000
NLRP8   30000 perm   7 sec   (4549 perm/sec)   p_kst 1.737667e-01   p_cons 3.793333e-02   p_joint 2.343333e-02

Joint ci ratio: 9.608147e-02	ci left: 3.802732e-02	ci right 4.188983e-02	k: 1597	n:40000
Cons ci ratio: 9.940024e-02	ci left: 3.556173e-02	ci right 3.930581e-02	k: 1496	n:40000
KS ci ratio: 4.284565e-02	ci left: 1.693294e-01	ci right 1.767682e-01	k: 6921	n:40000
NLRP8   40000 perm   9 sec   (4400 perm/sec)   p_kst 1.730250e-01   p_cons 3.740000e-02   p_joint 3.992500e-02

Outputting figure to mutsig2_images.part000000000115/NLRP8.2_3187_40000_0.17303_0.0374_0.039925.png
                gene_name: NLRP8
               theta_stop: 0.099 
                    nperm: 40000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.037 
      ci_cons_bounds_left: 0.036 
     ci_cons_bounds_right: 0.039 
                  p_joint: 0.040 
     ci_joint_bounds_left: 0.038 
    ci_joint_bounds_right: 0.042 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000115
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 115 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1532>
Subject: Job 8704286: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1532>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000116> was used as the working directory.
Started at Thu Nov 15 19:35:16 2012
Results reported at Thu Nov 15 19:40:16 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000116.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000116.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 116  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000116.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    280.23 sec.
    Max Memory :      5700 MB
    Max Swap   :      8436 MB

    Max Processes  :         7
    Max Threads    :        57

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
116
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 116
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 116: processing genes 10404 - 10494
Calculating significance of each gene.
Using projection method.
10404	NOC3L	1
10405	NOC4L	1
10406	NOD1	1
10407	NOD2	1.815084e-01
10408	NODAL	1
10409	NOG	1
10410	NOL10	1
10411	NOL11	1
10412	NOL12	1
10413	NOL3	1
10414	NOL4	1
10415	NOL6	2.877059e-01
10416	NOL7	1
10417	NOL8	1
10418	NOL9	1
10419	NOLC1	1
10420	NOM1	1
10421	NOMO1	3.448179e-01
10422	NOMO2	1
10423	NOMO3	1
10424	NONO	1
10425	NOP10	1
10426	NOP14	1
10427	NOP16	5.969871e-04
10428	NOP2	1
10429	NOP56	1
10430	NOP58	1
10431	NOS1	1
10432	NOS1AP	1
10433	NOS2	1
10434	NOS3	1
10435	NOSIP	1
10436	NOSTRIN	1
10437	NOTCH1	1
10438	NOTCH2	6.208703e-01
10439	NOTCH2NL	1
10440	NOTCH3	1
10441	NOTCH4	3.715073e-01
10442	NOTUM	1
10443	NOV	1
10444	NOVA1	1
10445	NOVA2	1
10446	NOX1	1
10447	NOX3	1
10448	NOX4	1
10449	NOX5	2.722720e-02
10450	NOXA1	1
10451	NOXO1	1
10452	NPAS1	1
10453	NPAS2	1
10454	NPAS3	1
10455	NPAS4	2.921226e-01
In gene NPAT the following bins exceed PROBCAP:
    THCA-ET-A39L-TP	categ 4	N = 2604    n = 1	mu =   1.40e-07
10456	NPAT	2.183988e-01
10457	NPB	1
10458	NPBWR1	1
10459	NPBWR2	1.254893e-01
10460	NPC1	1
10461	NPC1L1	2.275444e-01
10462	NPC2	1
10463	NPDC1	1
10464	NPEPL1	1
10465	NPEPPS	2.437878e-01
10466	NPFF	1
10467	NPFFR1	1
10468	NPFFR2	1.776271e-01
10469	NPHP1	1
10470	NPHP3	1
10471	NPHP4	1
10472	NPHS1	2.241220e-02
10473	NPHS2	1
10474	NPIP	1.897372e-02
10475	NPL	1
10476	NPLOC4	1
10477	NPM1	1
10478	NPM2	1
10479	NPM3	2.297339e-02
10480	NPNT	1
10481	NPPA	1
10482	NPPB	1
10483	NPPC	1
10484	NPR1	2.289233e-01
10485	NPR2	1
10486	NPR3	1
10487	NPRL2	1.798724e-01
10488	NPRL3	1
10489	NPS	1
10490	NPSR1	1
10491	NPTN	1
10492	NPTX1	1
10493	NPTX2	4.261377e-02
In gene NPTXR the following bins exceed PROBCAP:
    THCA-DJ-A2PQ-TP	categ 6	N = 845     n = 1	mu =   6.84e-08
10494	NPTXR	2.460664e-02
Done

Running MutSig 2:
Scatter job 116: processing genes 10404 - 10494
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
NPHS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.051180e-02	ci left: 2.865679e-01	ci right 3.045513e-01	k: 2955	n:10000
Cons ci ratio: 9.888455e-02	ci left: 1.290445e-01	ci right 1.425684e-01	k: 1357	n:10000
KS ci ratio: 3.294486e-02	ci left: 5.762723e-01	ci right 5.956776e-01	k: 5860	n:10000
NPHS1   10000 perm   2 sec   (4282 perm/sec)   p_kst 5.860000e-01   p_cons 1.357000e-01   p_joint 2.955000e-01

Outputting figure to mutsig2_images.part000000000116/NPHS1.3_3842_10000_0.586_0.1357_0.2955.png
                gene_name: NPHS1
               theta_stop: 0.099 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.14 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.14 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.30 

Current progress: 33 percent done.
NOP16
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.628658e-02	ci left: 2.504348e-01	ci right 2.677057e-01	k: 2590	n:10000
Cons ci ratio: 5.726153e-02	ci left: 3.098686e-01	ci right 3.282369e-01	k: 3190	n:10000
KS ci ratio: 5.472561e-02	ci left: 3.297201e-01	ci right 3.483737e-01	k: 3390	n:10000
NOP16   10000 perm   1 sec   (7324 perm/sec)   p_kst 3.390000e-01   p_cons 3.190000e-01   p_joint 2.590000e-01

Outputting figure to mutsig2_images.part000000000116/NOP16.2_556_10000_0.339_0.319_0.259.png
                gene_name: NOP16
               theta_stop: 0.066 
                    nperm: 10000 
                     p_ks: 0.34 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.35 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.26 
     ci_joint_bounds_left: 0.25 
    ci_joint_bounds_right: 0.27 

Current progress: 67 percent done.
NOX5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.106031e-03	ci left: 9.732324e-01	ci right 9.792858e-01	k: 9764	n:10000
Cons ci ratio: 8.477335e-03	ci left: 9.511695e-01	ci right 9.593627e-01	k: 9554	n:10000
KS ci ratio: 2.007111e-02	ci left: 7.842146e-01	ci right 8.002148e-01	k: 7923	n:10000
NOX5   10000 perm   2 sec   (5846 perm/sec)   p_kst 7.923000e-01   p_cons 9.554000e-01   p_joint 9.764000e-01

Outputting figure to mutsig2_images.part000000000116/NOX5.2_2395_10000_0.7923_0.9554_0.9764.png
                gene_name: NOX5
               theta_stop: 0.020 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.96 
      ci_cons_bounds_left: 0.95 
     ci_cons_bounds_right: 0.96 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.98 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000116
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 116 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1706>
Subject: Job 8704287: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1706>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000117> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 22:35:56 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000117.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000117.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 117  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000117.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10995.79 sec.
    Max Memory :      5832 MB
    Max Swap   :      8548 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
117
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 117
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 117: processing genes 10495 - 10584
Calculating significance of each gene.
Using projection method.
10495	NPVF	1
10496	NPW	1
10497	NPY	1
10498	NPY1R	1
10499	NPY2R	1
10500	NPY5R	1
10501	NQO1	1
10502	NQO2	1
10503	NR0B1	1
10504	NR0B2	1
10505	NR1D1	1
10506	NR1D2	1
10507	NR1H2	1
10508	NR1H3	1
10509	NR1H4	1
10510	NR1I2	1
10511	NR1I3	1
10512	NR2C1	1
10513	NR2C2	1
10514	NR2C2AP	1
10515	NR2E1	1
10516	NR2E3	1
10517	NR2F1	1
10518	NR2F2	1
10519	NR2F6	1
10520	NR3C1	1
In gene NR3C2 the following bins exceed PROBCAP:
    THCA-EM-A3AN-TP	categ 6	N = 2929    n = 1	mu =   6.67e-08
10521	NR3C2	1.188868e-01
10522	NR4A1	1
10523	NR4A2	1.003219e-01
10524	NR4A3	1
10525	NR5A1	1
10526	NR5A2	1
10527	NR6A1	1
10528	NRAP	1
10529	NRARP	1
In gene NRAS the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 586     n = 1	mu =   1.34e-07
10530	NRAS	3.219647e-15
10531	NRBF2	1
10532	NRBP1	1
10533	NRBP2	1
10534	NRCAM	1
10535	NRD1	1.866022e-01
10536	NRF1	1
10537	NRG1	1
10538	NRG2	9.012642e-02
10539	NRG3	1
10540	NRG4	1
10541	NRGN	1
10542	NRIP1	1
10543	NRIP2	1
10544	NRIP3	1
10545	NRK	1
10546	NRL	1
10547	NRM	1
10548	NRN1	1
10549	NRN1L	1
10550	NRP1	1
10551	NRP2	1
10552	NRSN1	1
10553	NRSN2	1
10554	NRTN	1
10555	NRXN1	1.735415e-01
10556	NRXN2	1.055955e-01
10557	NRXN3	4.359093e-01
10558	NSA2	1
10559	NSD1	5.425881e-02
10560	NSDHL	1
10561	NSF	1
10562	NSFL1C	1
10563	NSL1	1
10564	NSMAF	1
10565	NSMCE1	1
10566	NSMCE2	1
10567	NSMCE4A	1
10568	NSUN2	1
10569	NSUN3	1
10570	NSUN4	6.866785e-02
10571	NSUN5	1
10572	NSUN6	1
10573	NSUN7	1.565114e-01
10574	NT5C	1
10575	NT5C1A	1
10576	NT5C1B	1
10577	NT5C2	1
10578	NT5C3	2.061502e-02
10579	NT5C3L	1
10580	NT5DC1	1
10581	NT5DC2	1
10582	NT5DC3	1
10583	NT5E	6.853746e-02
10584	NT5M	1
Done

Running MutSig 2:
Scatter job 117: processing genes 10495 - 10584
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
NRAS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
NRAS   10000 perm   2 sec   (5722 perm/sec)   p_kst 1.000000e-04   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
NRAS   20000 perm   6 sec   (3396 perm/sec)   p_kst 5.000000e-05   p_cons 5.000000e-05   p_joint 0

Joint ci ratio: 3.919869e+00	ci left: 0	ci right 1.229551e-04	k: 0	n:30000
Cons ci ratio: 1.181688e+00	ci left: 1.598575e-04	ci right 6.129261e-04	k: 10	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
NRAS   30000 perm   8 sec   (3704 perm/sec)   p_kst 3.333333e-05   p_cons 3.333333e-04   p_joint 0

Joint ci ratio: 3.919902e+00	ci left: 0	ci right 9.221773e-05	k: 0	n:40000
Cons ci ratio: 1.959878e+00	ci left: 1.546707e-05	ci right 2.191660e-04	k: 3	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
NRAS   40000 perm   10 sec   (3852 perm/sec)   p_kst 2.500000e-05   p_cons 7.500000e-05   p_joint 0

Joint ci ratio: 3.919922e+00	ci left: 0	ci right 7.377487e-05	k: 0	n:50000
Cons ci ratio: 1.752972e+00	ci left: 2.179772e-05	ci right 2.048190e-04	k: 4	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
NRAS   50000 perm   13 sec   (3889 perm/sec)   p_kst 2.000000e-05   p_cons 8.000000e-05   p_joint 0

Joint ci ratio: 3.919935e+00	ci left: 0	ci right 6.147943e-05	k: 0	n:60000
Cons ci ratio: 1.752990e+00	ci left: 1.816471e-05	ci right 1.706843e-04	k: 4	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
NRAS   60000 perm   15 sec   (3925 perm/sec)   p_kst 1.666667e-05   p_cons 6.666667e-05   p_joint 0

Joint ci ratio: 3.919944e+00	ci left: 0	ci right 5.269689e-05	k: 0	n:70000
Cons ci ratio: 1.385840e+00	ci left: 4.020610e-05	ci right 2.060273e-04	k: 7	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
NRAS   70000 perm   18 sec   (3944 perm/sec)   p_kst 1.428571e-05   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919951e+00	ci left: 0	ci right 4.610993e-05	k: 0	n:80000
Cons ci ratio: 1.306585e+00	ci left: 4.317386e-05	ci right 1.970303e-04	k: 8	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
NRAS   80000 perm   20 sec   (3919 perm/sec)   p_kst 1.250000e-05   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919956e+00	ci left: 0	ci right 4.098671e-05	k: 0	n:90000
Cons ci ratio: 1.239537e+00	ci left: 4.572735e-05	ci right 1.898226e-04	k: 9	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
NRAS   90000 perm   23 sec   (3856 perm/sec)   p_kst 1.111111e-05   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919961e+00	ci left: 0	ci right 3.688811e-05	k: 0	n:100000
Cons ci ratio: 1.087136e+00	ci left: 6.200724e-05	ci right 2.096065e-04	k: 12	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
NRAS   100000 perm   26 sec   (3850 perm/sec)   p_kst 1.000000e-05   p_cons 1.200000e-04   p_joint 0

Joint ci ratio: 3.919964e+00	ci left: 0	ci right 3.353471e-05	k: 0	n:110000
Cons ci ratio: 6.047509e-01	ci left: 2.674884e-04	ci right 5.056130e-04	k: 41	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
NRAS   110000 perm   29 sec   (3831 perm/sec)   p_kst 9.090909e-06   p_cons 3.727273e-04   p_joint 0

Joint ci ratio: 3.919967e+00	ci left: 0	ci right 3.074019e-05	k: 0	n:120000
Cons ci ratio: 5.976848e-01	ci left: 2.522605e-04	ci right 4.730692e-04	k: 42	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
NRAS   120000 perm   32 sec   (3803 perm/sec)   p_kst 8.333333e-06   p_cons 3.500000e-04   p_joint 0

Joint ci ratio: 3.919970e+00	ci left: 0	ci right 2.837559e-05	k: 0	n:130000
Cons ci ratio: 5.842557e-01	ci left: 2.459371e-04	ci right 4.543425e-04	k: 44	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
NRAS   130000 perm   34 sec   (3771 perm/sec)   p_kst 7.692308e-06   p_cons 3.384615e-04   p_joint 0

Joint ci ratio: 3.919972e+00	ci left: 0	ci right 2.634879e-05	k: 0	n:140000
Cons ci ratio: 5.599000e-01	ci left: 2.528063e-04	ci right 4.545534e-04	k: 48	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
NRAS   140000 perm   37 sec   (3736 perm/sec)   p_kst 7.142857e-06   p_cons 3.428571e-04   p_joint 0

Joint ci ratio: 3.919974e+00	ci left: 0	ci right 2.459223e-05	k: 0	n:150000
Cons ci ratio: 5.237325e-01	ci left: 2.762351e-04	ci right 4.772407e-04	k: 55	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
NRAS   150000 perm   41 sec   (3696 perm/sec)   p_kst 6.666667e-06   p_cons 3.666667e-04   p_joint 0

Joint ci ratio: 3.919976e+00	ci left: 0	ci right 2.305523e-05	k: 0	n:160000
Cons ci ratio: 5.102448e-01	ci left: 2.752726e-04	ci right 4.685904e-04	k: 58	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
NRAS   160000 perm   44 sec   (3658 perm/sec)   p_kst 6.250000e-06   p_cons 3.625000e-04   p_joint 0

Joint ci ratio: 3.919977e+00	ci left: 0	ci right 2.169906e-05	k: 0	n:170000
Cons ci ratio: 4.937806e-01	ci left: 2.796290e-04	ci right 4.675124e-04	k: 62	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
NRAS   170000 perm   47 sec   (3620 perm/sec)   p_kst 5.882353e-06   p_cons 3.647059e-04   p_joint 0

Joint ci ratio: 3.919978e+00	ci left: 0	ci right 2.049356e-05	k: 0	n:180000
Cons ci ratio: 4.861270e-01	ci left: 2.738315e-04	ci right 4.540141e-04	k: 64	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
NRAS   180000 perm   50 sec   (3581 perm/sec)   p_kst 5.555556e-06   p_cons 3.555556e-04   p_joint 0

Joint ci ratio: 3.919979e+00	ci left: 0	ci right 1.941497e-05	k: 0	n:190000
Cons ci ratio: 4.752835e-01	ci left: 2.732948e-04	ci right 4.478083e-04	k: 67	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
NRAS   190000 perm   54 sec   (3542 perm/sec)   p_kst 5.263158e-06   p_cons 3.526316e-04   p_joint 0

Joint ci ratio: 3.919980e+00	ci left: 0	ci right 1.844423e-05	k: 0	n:200000
Cons ci ratio: 4.618921e-01	ci left: 2.772680e-04	ci right 4.477634e-04	k: 71	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
NRAS   200000 perm   57 sec   (3496 perm/sec)   p_kst 5.000000e-06   p_cons 3.550000e-04   p_joint 0

Joint ci ratio: 3.919981e+00	ci left: 0	ci right 1.756594e-05	k: 0	n:210000
Cons ci ratio: 4.437691e-01	ci left: 2.893781e-04	ci right 4.582494e-04	k: 77	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
NRAS   210000 perm   61 sec   (3456 perm/sec)   p_kst 4.761905e-06   p_cons 3.666667e-04   p_joint 0

Joint ci ratio: 3.919982e+00	ci left: 0	ci right 1.676749e-05	k: 0	n:220000
Cons ci ratio: 4.381886e-01	ci left: 2.843056e-04	ci right 4.475146e-04	k: 79	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
NRAS   220000 perm   64 sec   (3415 perm/sec)   p_kst 4.545455e-06   p_cons 3.590909e-04   p_joint 0

Joint ci ratio: 3.919983e+00	ci left: 0	ci right 1.603848e-05	k: 0	n:230000
Cons ci ratio: 4.301973e-01	ci left: 2.835620e-04	ci right 4.425184e-04	k: 82	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
NRAS   230000 perm   68 sec   (3377 perm/sec)   p_kst 4.347826e-06   p_cons 3.565217e-04   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.537021e-05	k: 0	n:240000
Cons ci ratio: 4.131259e-01	ci left: 2.978199e-04	ci right 4.563228e-04	k: 89	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
NRAS   240000 perm   72 sec   (3340 perm/sec)   p_kst 4.166667e-06   p_cons 3.708333e-04   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.475541e-05	k: 0	n:250000
Cons ci ratio: 4.064086e-01	ci left: 2.966699e-04	ci right 4.513005e-04	k: 92	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
NRAS   250000 perm   76 sec   (3288 perm/sec)   p_kst 4.000000e-06   p_cons 3.680000e-04   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.418790e-05	k: 0	n:260000
Cons ci ratio: 5.383975e-01	ci left: 1.493731e-04	ci right 2.622652e-04	k: 52	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
NRAS   260000 perm   80 sec   (3251 perm/sec)   p_kst 3.846154e-06   p_cons 2.000000e-04   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.366242e-05	k: 0	n:270000
Cons ci ratio: 5.333901e-01	ci left: 1.470427e-04	ci right 2.567526e-04	k: 53	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
NRAS   270000 perm   84 sec   (3212 perm/sec)   p_kst 3.703704e-06   p_cons 1.962963e-04   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.317448e-05	k: 0	n:280000
Cons ci ratio: 5.333920e-01	ci left: 1.417911e-04	ci right 2.475832e-04	k: 53	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
NRAS   280000 perm   88 sec   (3175 perm/sec)   p_kst 3.571429e-06   p_cons 1.892857e-04   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.272019e-05	k: 0	n:290000
Cons ci ratio: 5.146689e-01	ci left: 1.488696e-04	ci right 2.546482e-04	k: 57	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
NRAS   290000 perm   92 sec   (3137 perm/sec)   p_kst 3.448276e-06   p_cons 1.965517e-04   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.229619e-05	k: 0	n:300000
Cons ci ratio: 5.146706e-01	ci left: 1.439072e-04	ci right 2.461601e-04	k: 57	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
NRAS   300000 perm   97 sec   (3101 perm/sec)   p_kst 3.333333e-06   p_cons 1.900000e-04   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.189954e-05	k: 0	n:310000
Cons ci ratio: 5.102911e-01	ci left: 1.420734e-04	ci right 2.418593e-04	k: 58	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
NRAS   310000 perm   101 sec   (3067 perm/sec)   p_kst 3.225806e-06   p_cons 1.870968e-04   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.152768e-05	k: 0	n:320000
Cons ci ratio: 4.977915e-01	ci left: 1.458161e-04	ci right 2.448591e-04	k: 61	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
NRAS   320000 perm   105 sec   (3034 perm/sec)   p_kst 3.125000e-06   p_cons 1.906250e-04   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.117836e-05	k: 0	n:330000
Cons ci ratio: 4.938257e-01	ci left: 1.440485e-04	ci right 2.408457e-04	k: 62	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
NRAS   330000 perm   110 sec   (3001 perm/sec)   p_kst 3.030303e-06   p_cons 1.878788e-04   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.084959e-05	k: 0	n:340000
Cons ci ratio: 4.753216e-01	ci left: 1.527210e-04	ci right 2.502511e-04	k: 67	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
NRAS   340000 perm   115 sec   (2969 perm/sec)   p_kst 2.941176e-06   p_cons 1.970588e-04   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.053960e-05	k: 0	n:350000
Cons ci ratio: 4.684821e-01	ci left: 1.533920e-04	ci right 2.494904e-04	k: 69	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
NRAS   350000 perm   119 sec   (2938 perm/sec)   p_kst 2.857143e-06   p_cons 1.971429e-04   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.024683e-05	k: 0	n:360000
Cons ci ratio: 4.587541e-01	ci left: 1.564909e-04	ci right 2.518604e-04	k: 72	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
NRAS   360000 perm   124 sec   (2906 perm/sec)   p_kst 2.777778e-06   p_cons 2.000000e-04   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 9.969895e-06	k: 0	n:370000
Cons ci ratio: 4.587554e-01	ci left: 1.522613e-04	ci right 2.450535e-04	k: 72	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
NRAS   370000 perm   129 sec   (2875 perm/sec)   p_kst 2.702703e-06   p_cons 1.945946e-04   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.707530e-06	k: 0	n:380000
Cons ci ratio: 4.525973e-01	ci left: 1.529133e-04	ci right 2.444682e-04	k: 74	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
NRAS   380000 perm   134 sec   (2845 perm/sec)   p_kst 2.631579e-06   p_cons 1.947368e-04   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.458621e-06	k: 0	n:390000
Cons ci ratio: 4.525985e-01	ci left: 1.489924e-04	ci right 2.381999e-04	k: 74	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
NRAS   390000 perm   139 sec   (2816 perm/sec)   p_kst 2.564103e-06   p_cons 1.897436e-04   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.222156e-06	k: 0	n:400000
Cons ci ratio: 4.409904e-01	ci left: 1.541424e-04	ci right 2.433629e-04	k: 78	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
NRAS   400000 perm   144 sec   (2787 perm/sec)   p_kst 2.500000e-06   p_cons 1.950000e-04   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 8.997226e-06	k: 0	n:410000
Cons ci ratio: 4.382260e-01	ci left: 1.525518e-04	ci right 2.401347e-04	k: 79	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
NRAS   410000 perm   149 sec   (2759 perm/sec)   p_kst 2.439024e-06   p_cons 1.926829e-04   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.783008e-06	k: 0	n:420000
Cons ci ratio: 4.328488e-01	ci left: 1.531593e-04	ci right 2.396982e-04	k: 81	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
NRAS   420000 perm   154 sec   (2730 perm/sec)   p_kst 2.380952e-06   p_cons 1.928571e-04   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.578753e-06	k: 0	n:430000
Cons ci ratio: 4.328498e-01	ci left: 1.495974e-04	ci right 2.341240e-04	k: 81	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
NRAS   430000 perm   159 sec   (2703 perm/sec)   p_kst 2.325581e-06   p_cons 1.883721e-04   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.383782e-06	k: 0	n:440000
Cons ci ratio: 4.302348e-01	ci left: 1.482232e-04	ci right 2.313212e-04	k: 82	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
NRAS   440000 perm   164 sec   (2676 perm/sec)   p_kst 2.272727e-06   p_cons 1.863636e-04   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.197476e-06	k: 0	n:450000
Cons ci ratio: 4.251431e-01	ci left: 1.488953e-04	ci right 2.311009e-04	k: 84	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
NRAS   450000 perm   170 sec   (2652 perm/sec)   p_kst 2.222222e-06   p_cons 1.866667e-04   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.019271e-06	k: 0	n:460000
Cons ci ratio: 4.226645e-01	ci left: 1.476004e-04	ci right 2.284816e-04	k: 85	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
NRAS   460000 perm   175 sec   (2625 perm/sec)   p_kst 2.173913e-06   p_cons 1.847826e-04   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.848649e-06	k: 0	n:470000
Cons ci ratio: 4.202288e-01	ci left: 1.463619e-04	ci right 2.259724e-04	k: 86	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
NRAS   470000 perm   181 sec   (2600 perm/sec)   p_kst 2.127660e-06   p_cons 1.829787e-04   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.685136e-06	k: 0	n:480000
Cons ci ratio: 4.154802e-01	ci left: 1.470412e-04	ci right 2.258670e-04	k: 88	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
NRAS   480000 perm   186 sec   (2574 perm/sec)   p_kst 2.083333e-06   p_cons 1.833333e-04   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.528297e-06	k: 0	n:490000
Cons ci ratio: 4.108891e-01	ci left: 1.476977e-04	ci right 2.257611e-04	k: 90	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
NRAS   490000 perm   192 sec   (2549 perm/sec)   p_kst 2.040816e-06   p_cons 1.836735e-04   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.377732e-06	k: 0	n:500000
Cons ci ratio: 4.086502e-01	ci left: 1.465375e-04	ci right 2.234510e-04	k: 91	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
NRAS   500000 perm   198 sec   (2524 perm/sec)   p_kst 2.000000e-06   p_cons 1.820000e-04   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.233071e-06	k: 0	n:510000
Cons ci ratio: 4.086510e-01	ci left: 1.436642e-04	ci right 2.190697e-04	k: 91	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
NRAS   510000 perm   204 sec   (2502 perm/sec)   p_kst 1.960784e-06   p_cons 1.784314e-04   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.093974e-06	k: 0	n:520000
Cons ci ratio: 4.042802e-01	ci left: 1.443543e-04	ci right 2.190942e-04	k: 93	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
NRAS   520000 perm   210 sec   (2479 perm/sec)   p_kst 1.923077e-06   p_cons 1.788462e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.960126e-06	k: 0	n:530000
Cons ci ratio: 4.021471e-01	ci left: 1.433260e-04	ci right 2.170376e-04	k: 94	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
NRAS   530000 perm   216 sec   (2456 perm/sec)   p_kst 1.886792e-06   p_cons 1.773585e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.831235e-06	k: 0	n:540000
Cons ci ratio: 3.979796e-01	ci left: 1.440029e-04	ci right 2.170928e-04	k: 96	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
NRAS   540000 perm   222 sec   (2434 perm/sec)   p_kst 1.851852e-06   p_cons 1.777778e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.707031e-06	k: 0	n:550000
Cons ci ratio: 3.959442e-01	ci left: 1.430213e-04	ci right 2.151445e-04	k: 97	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
NRAS   550000 perm   228 sec   (2412 perm/sec)   p_kst 1.818182e-06   p_cons 1.763636e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.587263e-06	k: 0	n:560000
Cons ci ratio: 3.919646e-01	ci left: 1.436850e-04	ci right 2.152261e-04	k: 99	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
NRAS   560000 perm   234 sec   (2389 perm/sec)   p_kst 1.785714e-06   p_cons 1.767857e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.471697e-06	k: 0	n:570000
Cons ci ratio: 3.900197e-01	ci left: 1.427461e-04	ci right 2.133763e-04	k: 100	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
NRAS   570000 perm   241 sec   (2367 perm/sec)   p_kst 1.754386e-06   p_cons 1.754386e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.360117e-06	k: 0	n:580000
Cons ci ratio: 3.881034e-01	ci left: 1.418404e-04	ci right 2.115894e-04	k: 101	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
NRAS   580000 perm   247 sec   (2346 perm/sec)   p_kst 1.724138e-06   p_cons 1.741379e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.252319e-06	k: 0	n:590000
Cons ci ratio: 3.843534e-01	ci left: 1.424970e-04	ci right 2.117206e-04	k: 103	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
NRAS   590000 perm   254 sec   (2325 perm/sec)   p_kst 1.694915e-06   p_cons 1.745763e-04   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.148114e-06	k: 0	n:600000
Cons ci ratio: 3.771679e-01	ci left: 1.461507e-04	ci right 2.154936e-04	k: 107	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
NRAS   600000 perm   260 sec   (2304 perm/sec)   p_kst 1.666667e-06   p_cons 1.783333e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 6.047325e-06	k: 0	n:610000
Cons ci ratio: 3.737233e-01	ci left: 1.467241e-04	ci right 2.155476e-04	k: 109	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
NRAS   610000 perm   267 sec   (2284 perm/sec)   p_kst 1.639344e-06   p_cons 1.786885e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.949788e-06	k: 0	n:620000
Cons ci ratio: 3.720363e-01	ci left: 1.458193e-04	ci right 2.138344e-04	k: 110	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
NRAS   620000 perm   274 sec   (2264 perm/sec)   p_kst 1.612903e-06   p_cons 1.774194e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.855347e-06	k: 0	n:630000
Cons ci ratio: 3.687292e-01	ci left: 1.463839e-04	ci right 2.139090e-04	k: 112	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
NRAS   630000 perm   281 sec   (2245 perm/sec)   p_kst 1.587302e-06   p_cons 1.777778e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.763858e-06	k: 0	n:640000
Cons ci ratio: 3.655088e-01	ci left: 1.469333e-04	ci right 2.139787e-04	k: 114	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
NRAS   640000 perm   287 sec   (2226 perm/sec)   p_kst 1.562500e-06   p_cons 1.781250e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.675183e-06	k: 0	n:650000
Cons ci ratio: 3.655093e-01	ci left: 1.446728e-04	ci right 2.106868e-04	k: 114	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
NRAS   650000 perm   294 sec   (2208 perm/sec)   p_kst 1.538462e-06   p_cons 1.753846e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.589196e-06	k: 0	n:660000
Cons ci ratio: 3.608327e-01	ci left: 1.466115e-04	ci right 2.124530e-04	k: 117	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
NRAS   660000 perm   301 sec   (2189 perm/sec)   p_kst 1.515152e-06   p_cons 1.772727e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.505775e-06	k: 0	n:670000
Cons ci ratio: 4.021547e-01	ci left: 1.133769e-04	ci right 1.716871e-04	k: 94	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
NRAS   670000 perm   309 sec   (2172 perm/sec)   p_kst 1.492537e-06   p_cons 1.402985e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.424808e-06	k: 0	n:680000
Cons ci ratio: 3.959510e-01	ci left: 1.156786e-04	ci right 1.740146e-04	k: 97	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
NRAS   680000 perm   316 sec   (2153 perm/sec)   p_kst 1.470588e-06   p_cons 1.426471e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.346188e-06	k: 0	n:690000
Cons ci ratio: 3.939463e-01	ci left: 1.153075e-04	ci right 1.730852e-04	k: 98	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
NRAS   690000 perm   323 sec   (2136 perm/sec)   p_kst 1.449275e-06   p_cons 1.420290e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.269814e-06	k: 0	n:700000
Cons ci ratio: 3.919717e-01	ci left: 1.149476e-04	ci right 1.721816e-04	k: 99	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
NRAS   700000 perm   330 sec   (2119 perm/sec)   p_kst 1.428571e-06   p_cons 1.414286e-04   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.195591e-06	k: 0	n:710000
Cons ci ratio: 3.825243e-01	ci left: 1.196854e-04	ci right 1.774809e-04	k: 104	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
NRAS   710000 perm   338 sec   (2102 perm/sec)   p_kst 1.408451e-06   p_cons 1.464789e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.123431e-06	k: 0	n:720000
Cons ci ratio: 3.789323e-01	ci left: 1.205350e-04	ci right 1.780583e-04	k: 106	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
NRAS   720000 perm   345 sec   (2086 perm/sec)   p_kst 1.388889e-06   p_cons 1.472222e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.053247e-06	k: 0	n:730000
Cons ci ratio: 3.789327e-01	ci left: 1.188838e-04	ci right 1.756192e-04	k: 106	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
NRAS   730000 perm   353 sec   (2069 perm/sec)   p_kst 1.369863e-06   p_cons 1.452055e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.984960e-06	k: 0	n:740000
Cons ci ratio: 3.754400e-01	ci left: 1.197238e-04	ci right 1.762037e-04	k: 108	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
NRAS   740000 perm   361 sec   (2052 perm/sec)   p_kst 1.351351e-06   p_cons 1.459459e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.918494e-06	k: 0	n:750000
Cons ci ratio: 3.754404e-01	ci left: 1.181274e-04	ci right 1.738544e-04	k: 108	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
NRAS   750000 perm   368 sec   (2036 perm/sec)   p_kst 1.333333e-06   p_cons 1.440000e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.853777e-06	k: 0	n:760000
Cons ci ratio: 3.754407e-01	ci left: 1.165731e-04	ci right 1.715668e-04	k: 108	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
NRAS   760000 perm   376 sec   (2020 perm/sec)   p_kst 1.315789e-06   p_cons 1.421053e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.790741e-06	k: 0	n:770000
Cons ci ratio: 3.754411e-01	ci left: 1.150592e-04	ci right 1.693387e-04	k: 108	n:770000
KS ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
NRAS   770000 perm   384 sec   (2004 perm/sec)   p_kst 1.298701e-06   p_cons 1.402597e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.729321e-06	k: 0	n:780000
Cons ci ratio: 3.737307e-01	ci left: 1.147454e-04	ci right 1.685699e-04	k: 109	n:780000
KS ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
NRAS   780000 perm   392 sec   (1989 perm/sec)   p_kst 1.282051e-06   p_cons 1.397436e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.669457e-06	k: 0	n:790000
Cons ci ratio: 3.737311e-01	ci left: 1.132929e-04	ci right 1.664362e-04	k: 109	n:790000
KS ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
NRAS   790000 perm   400 sec   (1974 perm/sec)   p_kst 1.265823e-06   p_cons 1.379747e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.611089e-06	k: 0	n:800000
Cons ci ratio: 3.687363e-01	ci left: 1.152769e-04	ci right 1.684540e-04	k: 112	n:800000
KS ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
NRAS   800000 perm   408 sec   (1960 perm/sec)   p_kst 1.250000e-06   p_cons 1.400000e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.554162e-06	k: 0	n:810000
Cons ci ratio: 3.655157e-01	ci left: 1.160951e-04	ci right 1.690702e-04	k: 114	n:810000
KS ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
NRAS   810000 perm   416 sec   (1945 perm/sec)   p_kst 1.234568e-06   p_cons 1.407407e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.498623e-06	k: 0	n:820000
Cons ci ratio: 3.655160e-01	ci left: 1.146793e-04	ci right 1.670084e-04	k: 114	n:820000
KS ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
NRAS   820000 perm   425 sec   (1931 perm/sec)   p_kst 1.219512e-06   p_cons 1.390244e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.444423e-06	k: 0	n:830000
Cons ci ratio: 3.639372e-01	ci left: 1.143920e-04	ci right 1.663110e-04	k: 115	n:830000
KS ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
NRAS   830000 perm   433 sec   (1917 perm/sec)   p_kst 1.204819e-06   p_cons 1.385542e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.391514e-06	k: 0	n:840000
Cons ci ratio: 3.639375e-01	ci left: 1.130302e-04	ci right 1.643312e-04	k: 115	n:840000
KS ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
NRAS   840000 perm   441 sec   (1903 perm/sec)   p_kst 1.190476e-06   p_cons 1.369048e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.339849e-06	k: 0	n:850000
Cons ci ratio: 3.608400e-01	ci left: 1.138392e-04	ci right 1.649641e-04	k: 117	n:850000
KS ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
NRAS   850000 perm   450 sec   (1889 perm/sec)   p_kst 1.176471e-06   p_cons 1.376471e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.289386e-06	k: 0	n:860000
Cons ci ratio: 3.608403e-01	ci left: 1.125154e-04	ci right 1.630460e-04	k: 117	n:860000
KS ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
NRAS   860000 perm   459 sec   (1876 perm/sec)   p_kst 1.162791e-06   p_cons 1.360465e-04   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.240082e-06	k: 0	n:870000
Cons ci ratio: 3.608406e-01	ci left: 1.112221e-04	ci right 1.611719e-04	k: 117	n:870000
KS ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
NRAS   870000 perm   467 sec   (1861 perm/sec)   p_kst 1.149425e-06   p_cons 1.344828e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.191900e-06	k: 0	n:880000
Cons ci ratio: 3.563389e-01	ci left: 1.130603e-04	ci right 1.630553e-04	k: 120	n:880000
KS ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
NRAS   880000 perm   476 sec   (1848 perm/sec)   p_kst 1.136364e-06   p_cons 1.363636e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.144800e-06	k: 0	n:890000
Cons ci ratio: 3.534299e-01	ci left: 1.138368e-04	ci right 1.636699e-04	k: 122	n:890000
KS ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
NRAS   890000 perm   485 sec   (1835 perm/sec)   p_kst 1.123596e-06   p_cons 1.370787e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.098747e-06	k: 0	n:900000
Cons ci ratio: 3.520019e-01	ci left: 1.135846e-04	ci right 1.630605e-04	k: 123	n:900000
KS ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
NRAS   900000 perm   494 sec   (1822 perm/sec)   p_kst 1.111111e-06   p_cons 1.366667e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.053705e-06	k: 0	n:910000
Cons ci ratio: 3.520022e-01	ci left: 1.123364e-04	ci right 1.612687e-04	k: 123	n:910000
KS ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
NRAS   910000 perm   503 sec   (1807 perm/sec)   p_kst 1.098901e-06   p_cons 1.351648e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.009644e-06	k: 0	n:920000
Cons ci ratio: 3.478196e-01	ci left: 1.140897e-04	ci right 1.630621e-04	k: 126	n:920000
KS ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
NRAS   920000 perm   513 sec   (1794 perm/sec)   p_kst 1.086957e-06   p_cons 1.369565e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.966529e-06	k: 0	n:930000
Cons ci ratio: 3.451126e-01	ci left: 1.148263e-04	ci right 1.636456e-04	k: 128	n:930000
KS ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
NRAS   930000 perm   522 sec   (1782 perm/sec)   p_kst 1.075269e-06   p_cons 1.376344e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.924332e-06	k: 0	n:940000
Cons ci ratio: 3.437828e-01	ci left: 1.145766e-04	ci right 1.630602e-04	k: 129	n:940000
KS ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
NRAS   940000 perm   531 sec   (1770 perm/sec)   p_kst 1.063830e-06   p_cons 1.372340e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.883023e-06	k: 0	n:950000
Cons ci ratio: 3.411683e-01	ci left: 1.152947e-04	ci right 1.636294e-04	k: 131	n:950000
KS ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
NRAS   950000 perm   540 sec   (1758 perm/sec)   p_kst 1.052632e-06   p_cons 1.378947e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.842575e-06	k: 0	n:960000
Cons ci ratio: 3.386126e-01	ci left: 1.159993e-04	ci right 1.641854e-04	k: 133	n:960000
KS ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
NRAS   960000 perm   550 sec   (1747 perm/sec)   p_kst 1.041667e-06   p_cons 1.385417e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.802961e-06	k: 0	n:970000
Cons ci ratio: 3.361135e-01	ci left: 1.166906e-04	ci right 1.647287e-04	k: 135	n:970000
KS ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
NRAS   970000 perm   559 sec   (1735 perm/sec)   p_kst 1.030928e-06   p_cons 1.391753e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.764156e-06	k: 0	n:980000
Cons ci ratio: 3.361137e-01	ci left: 1.154999e-04	ci right 1.630478e-04	k: 135	n:980000
KS ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
NRAS   980000 perm   569 sec   (1723 perm/sec)   p_kst 1.020408e-06   p_cons 1.377551e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.726134e-06	k: 0	n:990000
Cons ci ratio: 3.361140e-01	ci left: 1.143332e-04	ci right 1.614008e-04	k: 135	n:990000
KS ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
NRAS   990000 perm   578 sec   (1712 perm/sec)   p_kst 1.010101e-06   p_cons 1.363636e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.688873e-06	k: 0	n:1000000
Cons ci ratio: 3.361142e-01	ci left: 1.131899e-04	ci right 1.597869e-04	k: 135	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
NRAS   1000000 perm   588 sec   (1700 perm/sec)   p_kst 1.000000e-06   p_cons 1.350000e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.652349e-06	k: 0	n:1010000
Cons ci ratio: 3.324670e-01	ci left: 1.147902e-04	ci right 1.614235e-04	k: 138	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
NRAS   1010000 perm   598 sec   (1689 perm/sec)   p_kst 9.900990e-07   p_cons 1.366337e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.616542e-06	k: 0	n:1020000
Cons ci ratio: 3.324672e-01	ci left: 1.136648e-04	ci right 1.598409e-04	k: 138	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
NRAS   1020000 perm   608 sec   (1678 perm/sec)   p_kst 9.803922e-07   p_cons 1.352941e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.581430e-06	k: 0	n:1030000
Cons ci ratio: 3.324675e-01	ci left: 1.125613e-04	ci right 1.582891e-04	k: 138	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
NRAS   1030000 perm   618 sec   (1667 perm/sec)   p_kst 9.708738e-07   p_cons 1.339806e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.546993e-06	k: 0	n:1040000
Cons ci ratio: 3.324677e-01	ci left: 1.114789e-04	ci right 1.567671e-04	k: 138	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
NRAS   1040000 perm   628 sec   (1657 perm/sec)   p_kst 9.615385e-07   p_cons 1.326923e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.513212e-06	k: 0	n:1050000
Cons ci ratio: 3.324679e-01	ci left: 1.104172e-04	ci right 1.552741e-04	k: 138	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
NRAS   1050000 perm   638 sec   (1646 perm/sec)   p_kst 9.523810e-07   p_cons 1.314286e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.480069e-06	k: 0	n:1060000
Cons ci ratio: 3.312784e-01	ci left: 1.102403e-04	ci right 1.548310e-04	k: 139	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
NRAS   1060000 perm   648 sec   (1635 perm/sec)   p_kst 9.433962e-07   p_cons 1.311321e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.447545e-06	k: 0	n:1070000
Cons ci ratio: 3.312786e-01	ci left: 1.092100e-04	ci right 1.533840e-04	k: 139	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
NRAS   1070000 perm   659 sec   (1624 perm/sec)   p_kst 9.345794e-07   p_cons 1.299065e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.415623e-06	k: 0	n:1080000
Cons ci ratio: 3.277850e-01	ci left: 1.107469e-04	ci right 1.549705e-04	k: 142	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
NRAS   1080000 perm   669 sec   (1614 perm/sec)   p_kst 9.259259e-07   p_cons 1.314815e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.384287e-06	k: 0	n:1090000
Cons ci ratio: 3.266449e-01	ci left: 1.105729e-04	ci right 1.545413e-04	k: 143	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
NRAS   1090000 perm   680 sec   (1604 perm/sec)   p_kst 9.174312e-07   p_cons 1.311927e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.353521e-06	k: 0	n:1100000
Cons ci ratio: 3.255167e-01	ci left: 1.104024e-04	ci right 1.541196e-04	k: 144	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
NRAS   1100000 perm   690 sec   (1593 perm/sec)   p_kst 9.090909e-07   p_cons 1.309091e-04   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.323309e-06	k: 0	n:1110000
Cons ci ratio: 3.232946e-01	ci left: 1.110629e-04	ci right 1.546791e-04	k: 146	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
NRAS   1110000 perm   701 sec   (1584 perm/sec)   p_kst 9.009009e-07   p_cons 1.315315e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.293637e-06	k: 0	n:1120000
Cons ci ratio: 3.222006e-01	ci left: 1.108918e-04	ci right 1.542630e-04	k: 147	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
NRAS   1120000 perm   712 sec   (1574 perm/sec)   p_kst 8.928571e-07   p_cons 1.312500e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.264490e-06	k: 0	n:1130000
Cons ci ratio: 3.200453e-01	ci left: 1.115377e-04	ci right 1.548099e-04	k: 149	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
NRAS   1130000 perm   723 sec   (1564 perm/sec)   p_kst 8.849558e-07   p_cons 1.318584e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.235854e-06	k: 0	n:1140000
Cons ci ratio: 3.189838e-01	ci left: 1.113661e-04	ci right 1.543993e-04	k: 150	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
NRAS   1140000 perm   733 sec   (1555 perm/sec)   p_kst 8.771930e-07   p_cons 1.315789e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.207716e-06	k: 0	n:1150000
Cons ci ratio: 3.138298e-01	ci left: 1.144004e-04	ci right 1.577485e-04	k: 155	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
NRAS   1150000 perm   744 sec   (1545 perm/sec)   p_kst 8.695652e-07   p_cons 1.347826e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.180063e-06	k: 0	n:1160000
Cons ci ratio: 3.128288e-01	ci left: 1.142085e-04	ci right 1.573183e-04	k: 156	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
NRAS   1160000 perm   755 sec   (1536 perm/sec)   p_kst 8.620690e-07   p_cons 1.344828e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.152883e-06	k: 0	n:1170000
Cons ci ratio: 3.128289e-01	ci left: 1.132323e-04	ci right 1.559737e-04	k: 156	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
NRAS   1170000 perm   766 sec   (1527 perm/sec)   p_kst 8.547009e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.126164e-06	k: 0	n:1180000
Cons ci ratio: 3.098821e-01	ci left: 1.146165e-04	ci right 1.573922e-04	k: 159	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
NRAS   1180000 perm   777 sec   (1518 perm/sec)   p_kst 8.474576e-07   p_cons 1.347458e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.099894e-06	k: 0	n:1190000
Cons ci ratio: 3.098822e-01	ci left: 1.136533e-04	ci right 1.560696e-04	k: 159	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
NRAS   1190000 perm   789 sec   (1509 perm/sec)   p_kst 8.403361e-07   p_cons 1.336134e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.074061e-06	k: 0	n:1200000
Cons ci ratio: 3.089184e-01	ci left: 1.134748e-04	ci right 1.556669e-04	k: 160	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
NRAS   1200000 perm   800 sec   (1500 perm/sec)   p_kst 8.333333e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.048656e-06	k: 0	n:1210000
Cons ci ratio: 3.060797e-01	ci left: 1.148251e-04	ci right 1.570504e-04	k: 163	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
NRAS   1210000 perm   811 sec   (1491 perm/sec)   p_kst 8.264463e-07   p_cons 1.347107e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.023667e-06	k: 0	n:1220000
Cons ci ratio: 3.060799e-01	ci left: 1.138839e-04	ci right 1.557631e-04	k: 163	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
NRAS   1220000 perm   823 sec   (1483 perm/sec)   p_kst 8.196721e-07   p_cons 1.336066e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.999084e-06	k: 0	n:1230000
Cons ci ratio: 3.051510e-01	ci left: 1.137087e-04	ci right 1.553719e-04	k: 164	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
NRAS   1230000 perm   834 sec   (1474 perm/sec)   p_kst 8.130081e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.974898e-06	k: 0	n:1240000
Cons ci ratio: 3.042305e-01	ci left: 1.135365e-04	ci right 1.549868e-04	k: 165	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
NRAS   1240000 perm   846 sec   (1466 perm/sec)   p_kst 8.064516e-07   p_cons 1.330645e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.951099e-06	k: 0	n:1250000
Cons ci ratio: 3.024141e-01	ci left: 1.141064e-04	ci right 1.554683e-04	k: 167	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
NRAS   1250000 perm   858 sec   (1457 perm/sec)   p_kst 8.000000e-07   p_cons 1.336000e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.927678e-06	k: 0	n:1260000
Cons ci ratio: 3.024143e-01	ci left: 1.132008e-04	ci right 1.542345e-04	k: 167	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
NRAS   1260000 perm   869 sec   (1449 perm/sec)   p_kst 7.936508e-07   p_cons 1.325397e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.904625e-06	k: 0	n:1270000
Cons ci ratio: 2.997496e-01	ci left: 1.144933e-04	ci right 1.555601e-04	k: 170	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
NRAS   1270000 perm   881 sec   (1442 perm/sec)   p_kst 7.874016e-07   p_cons 1.338583e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.881933e-06	k: 0	n:1280000
Cons ci ratio: 2.997498e-01	ci left: 1.135988e-04	ci right 1.543448e-04	k: 170	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
NRAS   1280000 perm   893 sec   (1433 perm/sec)   p_kst 7.812500e-07   p_cons 1.328125e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.859592e-06	k: 0	n:1290000
Cons ci ratio: 2.980120e-01	ci left: 1.141523e-04	ci right 1.548146e-04	k: 172	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
NRAS   1290000 perm   905 sec   (1425 perm/sec)   p_kst 7.751938e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.837596e-06	k: 0	n:1300000
Cons ci ratio: 2.980121e-01	ci left: 1.132742e-04	ci right 1.536237e-04	k: 172	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
NRAS   1300000 perm   918 sec   (1417 perm/sec)   p_kst 7.692308e-07   p_cons 1.323077e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.815935e-06	k: 0	n:1310000
Cons ci ratio: 2.954612e-01	ci left: 1.145292e-04	ci right 1.549111e-04	k: 175	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
NRAS   1310000 perm   930 sec   (1409 perm/sec)   p_kst 7.633588e-07   p_cons 1.335878e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.794602e-06	k: 0	n:1320000
Cons ci ratio: 2.921595e-01	ci left: 1.164686e-04	ci right 1.569905e-04	k: 179	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
NRAS   1320000 perm   942 sec   (1402 perm/sec)   p_kst 7.575758e-07   p_cons 1.356061e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.773590e-06	k: 0	n:1330000
Cons ci ratio: 2.913514e-01	ci left: 1.162897e-04	ci right 1.566169e-04	k: 180	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
NRAS   1330000 perm   954 sec   (1394 perm/sec)   p_kst 7.518797e-07   p_cons 1.353383e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.752891e-06	k: 0	n:1340000
Cons ci ratio: 2.905499e-01	ci left: 1.161137e-04	ci right 1.562486e-04	k: 181	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
NRAS   1340000 perm   966 sec   (1386 perm/sec)   p_kst 7.462687e-07   p_cons 1.350746e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.732500e-06	k: 0	n:1350000
Cons ci ratio: 2.889664e-01	ci left: 1.166274e-04	ci right 1.566801e-04	k: 183	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
NRAS   1350000 perm   979 sec   (1379 perm/sec)   p_kst 7.407407e-07   p_cons 1.355556e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.712408e-06	k: 0	n:1360000
Cons ci ratio: 2.881844e-01	ci left: 1.164519e-04	ci right 1.563164e-04	k: 184	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
NRAS   1360000 perm   991 sec   (1372 perm/sec)   p_kst 7.352941e-07   p_cons 1.352941e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.692609e-06	k: 0	n:1370000
Cons ci ratio: 2.874087e-01	ci left: 1.162792e-04	ci right 1.559579e-04	k: 185	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
NRAS   1370000 perm   1004 sec   (1365 perm/sec)   p_kst 7.299270e-07   p_cons 1.350365e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.673097e-06	k: 0	n:1380000
Cons ci ratio: 2.858758e-01	ci left: 1.167817e-04	ci right 1.563809e-04	k: 187	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
NRAS   1380000 perm   1017 sec   (1358 perm/sec)   p_kst 7.246377e-07   p_cons 1.355072e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.653867e-06	k: 0	n:1390000
Cons ci ratio: 2.851186e-01	ci left: 1.166094e-04	ci right 1.560267e-04	k: 188	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
NRAS   1390000 perm   1029 sec   (1351 perm/sec)   p_kst 7.194245e-07   p_cons 1.352518e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.634910e-06	k: 0	n:1400000
Cons ci ratio: 2.843673e-01	ci left: 1.164398e-04	ci right 1.556774e-04	k: 189	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
NRAS   1400000 perm   1042 sec   (1344 perm/sec)   p_kst 7.142857e-07   p_cons 1.350000e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.616223e-06	k: 0	n:1410000
Cons ci ratio: 2.828823e-01	ci left: 1.169315e-04	ci right 1.560923e-04	k: 191	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
NRAS   1410000 perm   1055 sec   (1337 perm/sec)   p_kst 7.092199e-07   p_cons 1.354610e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.597799e-06	k: 0	n:1420000
Cons ci ratio: 2.821485e-01	ci left: 1.167624e-04	ci right 1.557471e-04	k: 192	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
NRAS   1420000 perm   1068 sec   (1330 perm/sec)   p_kst 7.042254e-07   p_cons 1.352113e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.579633e-06	k: 0	n:1430000
Cons ci ratio: 2.806978e-01	ci left: 1.172458e-04	ci right 1.561550e-04	k: 194	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
NRAS   1430000 perm   1081 sec   (1323 perm/sec)   p_kst 6.993007e-07   p_cons 1.356643e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.561719e-06	k: 0	n:1440000
Cons ci ratio: 2.806979e-01	ci left: 1.164316e-04	ci right 1.550706e-04	k: 194	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
NRAS   1440000 perm   1094 sec   (1317 perm/sec)   p_kst 6.944444e-07   p_cons 1.347222e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.544052e-06	k: 0	n:1450000
Cons ci ratio: 2.806981e-01	ci left: 1.156286e-04	ci right 1.540011e-04	k: 194	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
NRAS   1450000 perm   1107 sec   (1310 perm/sec)   p_kst 6.896552e-07   p_cons 1.337931e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.526627e-06	k: 0	n:1460000
Cons ci ratio: 2.792695e-01	ci left: 1.161103e-04	ci right 1.544121e-04	k: 196	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
NRAS   1460000 perm   1119 sec   (1304 perm/sec)   p_kst 6.849315e-07   p_cons 1.342466e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.509439e-06	k: 0	n:1470000
Cons ci ratio: 2.792696e-01	ci left: 1.153204e-04	ci right 1.533617e-04	k: 196	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
NRAS   1470000 perm   1132 sec   (1298 perm/sec)   p_kst 6.802721e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.492483e-06	k: 0	n:1480000
Cons ci ratio: 2.785635e-01	ci left: 1.151697e-04	ci right 1.530483e-04	k: 197	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
NRAS   1480000 perm   1145 sec   (1292 perm/sec)   p_kst 6.756757e-07   p_cons 1.331081e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.475755e-06	k: 0	n:1490000
Cons ci ratio: 2.764767e-01	ci left: 1.162701e-04	ci right 1.541743e-04	k: 200	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
NRAS   1490000 perm   1159 sec   (1286 perm/sec)   p_kst 6.711409e-07   p_cons 1.342282e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.459250e-06	k: 0	n:1500000
Cons ci ratio: 2.744361e-01	ci left: 1.173568e-04	ci right 1.552842e-04	k: 203	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
NRAS   1500000 perm   1172 sec   (1280 perm/sec)   p_kst 6.666667e-07   p_cons 1.353333e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.442964e-06	k: 0	n:1510000
Cons ci ratio: 2.744363e-01	ci left: 1.165796e-04	ci right 1.542559e-04	k: 203	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
NRAS   1510000 perm   1185 sec   (1274 perm/sec)   p_kst 6.622517e-07   p_cons 1.344371e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.426891e-06	k: 0	n:1520000
Cons ci ratio: 2.731007e-01	ci left: 1.170381e-04	ci right 1.546469e-04	k: 205	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
NRAS   1520000 perm   1198 sec   (1268 perm/sec)   p_kst 6.578947e-07   p_cons 1.348684e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.411029e-06	k: 0	n:1530000
Cons ci ratio: 2.711335e-01	ci left: 1.181002e-04	ci right 1.557304e-04	k: 208	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
NRAS   1530000 perm   1212 sec   (1263 perm/sec)   p_kst 6.535948e-07   p_cons 1.359477e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.395373e-06	k: 0	n:1540000
Cons ci ratio: 2.698454e-01	ci left: 1.185439e-04	ci right 1.561057e-04	k: 210	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
NRAS   1540000 perm   1225 sec   (1257 perm/sec)   p_kst 6.493506e-07   p_cons 1.363636e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.379919e-06	k: 0	n:1550000
Cons ci ratio: 2.692082e-01	ci left: 1.183807e-04	ci right 1.557872e-04	k: 211	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
NRAS   1550000 perm   1239 sec   (1251 perm/sec)   p_kst 6.451613e-07   p_cons 1.361290e-04   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.364664e-06	k: 0	n:1560000
Cons ci ratio: 2.685756e-01	ci left: 1.182197e-04	ci right 1.554727e-04	k: 212	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
NRAS   1560000 perm   1253 sec   (1245 perm/sec)   p_kst 6.410256e-07   p_cons 1.358974e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.349602e-06	k: 0	n:1570000
Cons ci ratio: 2.685757e-01	ci left: 1.174667e-04	ci right 1.544824e-04	k: 212	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
NRAS   1570000 perm   1266 sec   (1240 perm/sec)   p_kst 6.369427e-07   p_cons 1.350318e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.334731e-06	k: 0	n:1580000
Cons ci ratio: 2.673235e-01	ci left: 1.179040e-04	ci right 1.548554e-04	k: 214	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
NRAS   1580000 perm   1280 sec   (1234 perm/sec)   p_kst 6.329114e-07   p_cons 1.354430e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.320047e-06	k: 0	n:1590000
Cons ci ratio: 2.673236e-01	ci left: 1.171625e-04	ci right 1.538814e-04	k: 214	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
NRAS   1590000 perm   1295 sec   (1228 perm/sec)   p_kst 6.289308e-07   p_cons 1.345912e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.305547e-06	k: 0	n:1600000
Cons ci ratio: 2.667041e-01	ci left: 1.170134e-04	ci right 1.535864e-04	k: 215	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
NRAS   1600000 perm   1310 sec   (1222 perm/sec)   p_kst 6.250000e-07   p_cons 1.343750e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.291227e-06	k: 0	n:1610000
Cons ci ratio: 2.667042e-01	ci left: 1.162866e-04	ci right 1.526325e-04	k: 215	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
NRAS   1610000 perm   1324 sec   (1216 perm/sec)   p_kst 6.211180e-07   p_cons 1.335404e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.277083e-06	k: 0	n:1620000
Cons ci ratio: 2.667044e-01	ci left: 1.155688e-04	ci right 1.516903e-04	k: 215	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
NRAS   1620000 perm   1339 sec   (1210 perm/sec)   p_kst 6.172840e-07   p_cons 1.327160e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.263114e-06	k: 0	n:1630000
Cons ci ratio: 2.667045e-01	ci left: 1.148597e-04	ci right 1.507597e-04	k: 215	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
NRAS   1630000 perm   1353 sec   (1205 perm/sec)   p_kst 6.134969e-07   p_cons 1.319018e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.249314e-06	k: 0	n:1640000
Cons ci ratio: 2.667046e-01	ci left: 1.141594e-04	ci right 1.498404e-04	k: 215	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
NRAS   1640000 perm   1367 sec   (1200 perm/sec)   p_kst 6.097561e-07   p_cons 1.310976e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.235682e-06	k: 0	n:1650000
Cons ci ratio: 2.660894e-01	ci left: 1.140331e-04	ci right 1.495788e-04	k: 216	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
NRAS   1650000 perm   1381 sec   (1195 perm/sec)   p_kst 6.060606e-07   p_cons 1.309091e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.222214e-06	k: 0	n:1660000
Cons ci ratio: 2.642688e-01	ci left: 1.150332e-04	ci right 1.506048e-04	k: 219	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
NRAS   1660000 perm   1396 sec   (1189 perm/sec)   p_kst 6.024096e-07   p_cons 1.319277e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.208907e-06	k: 0	n:1670000
Cons ci ratio: 2.630756e-01	ci left: 1.154629e-04	ci right 1.509795e-04	k: 221	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
NRAS   1670000 perm   1411 sec   (1184 perm/sec)   p_kst 5.988024e-07   p_cons 1.323353e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.195759e-06	k: 0	n:1680000
Cons ci ratio: 2.618985e-01	ci left: 1.158878e-04	ci right 1.513494e-04	k: 223	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
NRAS   1680000 perm   1425 sec   (1179 perm/sec)   p_kst 5.952381e-07   p_cons 1.327381e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.182767e-06	k: 0	n:1690000
Cons ci ratio: 2.613159e-01	ci left: 1.157549e-04	ci right 1.510843e-04	k: 224	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
NRAS   1690000 perm   1440 sec   (1173 perm/sec)   p_kst 5.917160e-07   p_cons 1.325444e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.169927e-06	k: 0	n:1700000
Cons ci ratio: 2.590234e-01	ci left: 1.172736e-04	ci right 1.527016e-04	k: 228	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
NRAS   1700000 perm   1456 sec   (1168 perm/sec)   p_kst 5.882353e-07   p_cons 1.341176e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.157237e-06	k: 0	n:1710000
Cons ci ratio: 2.584597e-01	ci left: 1.171346e-04	ci right 1.524313e-04	k: 229	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
NRAS   1710000 perm   1471 sec   (1163 perm/sec)   p_kst 5.847953e-07   p_cons 1.339181e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.144695e-06	k: 0	n:1720000
Cons ci ratio: 2.578997e-01	ci left: 1.169974e-04	ci right 1.521640e-04	k: 230	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
NRAS   1720000 perm   1486 sec   (1157 perm/sec)   p_kst 5.813953e-07   p_cons 1.337209e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.132298e-06	k: 0	n:1730000
Cons ci ratio: 2.578998e-01	ci left: 1.163211e-04	ci right 1.512844e-04	k: 230	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
NRAS   1730000 perm   1502 sec   (1152 perm/sec)   p_kst 5.780347e-07   p_cons 1.329480e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.120043e-06	k: 0	n:1740000
Cons ci ratio: 2.573434e-01	ci left: 1.161902e-04	ci right 1.510267e-04	k: 231	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
NRAS   1740000 perm   1517 sec   (1147 perm/sec)   p_kst 5.747126e-07   p_cons 1.327586e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.107929e-06	k: 0	n:1750000
Cons ci ratio: 2.562412e-01	ci left: 1.165955e-04	ci right 1.513799e-04	k: 233	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
NRAS   1750000 perm   1533 sec   (1142 perm/sec)   p_kst 5.714286e-07   p_cons 1.331429e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.095952e-06	k: 0	n:1760000
Cons ci ratio: 2.562413e-01	ci left: 1.159331e-04	ci right 1.505198e-04	k: 233	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
NRAS   1760000 perm   1548 sec   (1137 perm/sec)   p_kst 5.681818e-07   p_cons 1.323864e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.084111e-06	k: 0	n:1770000
Cons ci ratio: 2.556956e-01	ci left: 1.158068e-04	ci right 1.502706e-04	k: 234	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
NRAS   1770000 perm   1564 sec   (1132 perm/sec)   p_kst 5.649718e-07   p_cons 1.322034e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.072402e-06	k: 0	n:1780000
Cons ci ratio: 2.556957e-01	ci left: 1.151562e-04	ci right 1.494264e-04	k: 234	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
NRAS   1780000 perm   1580 sec   (1127 perm/sec)   p_kst 5.617978e-07   p_cons 1.314607e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.060824e-06	k: 0	n:1790000
Cons ci ratio: 2.551534e-01	ci left: 1.150358e-04	ci right 1.491859e-04	k: 235	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
NRAS   1790000 perm   1596 sec   (1122 perm/sec)   p_kst 5.586592e-07   p_cons 1.312849e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.049375e-06	k: 0	n:1800000
Cons ci ratio: 2.546145e-01	ci left: 1.149167e-04	ci right 1.489481e-04	k: 236	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
NRAS   1800000 perm   1612 sec   (1117 perm/sec)   p_kst 5.555556e-07   p_cons 1.311111e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.038053e-06	k: 0	n:1810000
Cons ci ratio: 2.546146e-01	ci left: 1.142818e-04	ci right 1.481252e-04	k: 236	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
NRAS   1810000 perm   1628 sec   (1112 perm/sec)   p_kst 5.524862e-07   p_cons 1.303867e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.026855e-06	k: 0	n:1820000
Cons ci ratio: 2.546147e-01	ci left: 1.136539e-04	ci right 1.473113e-04	k: 236	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
NRAS   1820000 perm   1644 sec   (1107 perm/sec)   p_kst 5.494505e-07   p_cons 1.296703e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.015779e-06	k: 0	n:1830000
Cons ci ratio: 2.530182e-01	ci left: 1.145679e-04	ci right 1.482497e-04	k: 239	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
NRAS   1830000 perm   1660 sec   (1102 perm/sec)   p_kst 5.464481e-07   p_cons 1.306011e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.004824e-06	k: 0	n:1840000
Cons ci ratio: 2.519705e-01	ci left: 1.149635e-04	ci right 1.485996e-04	k: 241	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
NRAS   1840000 perm   1676 sec   (1098 perm/sec)   p_kst 5.434783e-07   p_cons 1.309783e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.993987e-06	k: 0	n:1850000
Cons ci ratio: 2.514515e-01	ci left: 1.148485e-04	ci right 1.483709e-04	k: 242	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
NRAS   1850000 perm   1692 sec   (1093 perm/sec)   p_kst 5.405405e-07   p_cons 1.308108e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.983267e-06	k: 0	n:1860000
Cons ci ratio: 2.509358e-01	ci left: 1.147348e-04	ci right 1.481447e-04	k: 243	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
NRAS   1860000 perm   1709 sec   (1088 perm/sec)   p_kst 5.376344e-07   p_cons 1.306452e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.972661e-06	k: 0	n:1870000
Cons ci ratio: 2.504231e-01	ci left: 1.146224e-04	ci right 1.479207e-04	k: 244	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
NRAS   1870000 perm   1726 sec   (1084 perm/sec)   p_kst 5.347594e-07   p_cons 1.304813e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.962168e-06	k: 0	n:1880000
Cons ci ratio: 2.494072e-01	ci left: 1.150099e-04	ci right 1.482642e-04	k: 246	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
NRAS   1880000 perm   1742 sec   (1079 perm/sec)   p_kst 5.319149e-07   p_cons 1.308511e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.951786e-06	k: 0	n:1890000
Cons ci ratio: 2.484035e-01	ci left: 1.153936e-04	ci right 1.486038e-04	k: 248	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
NRAS   1890000 perm   1759 sec   (1074 perm/sec)   p_kst 5.291005e-07   p_cons 1.312169e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.941514e-06	k: 0	n:1900000
Cons ci ratio: 2.469203e-01	ci left: 1.162672e-04	ci right 1.494984e-04	k: 251	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
NRAS   1900000 perm   1776 sec   (1070 perm/sec)   p_kst 5.263158e-07   p_cons 1.321053e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.931349e-06	k: 0	n:1910000
Cons ci ratio: 2.469204e-01	ci left: 1.156585e-04	ci right 1.487157e-04	k: 251	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
NRAS   1910000 perm   1793 sec   (1066 perm/sec)   p_kst 5.235602e-07   p_cons 1.314136e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.921290e-06	k: 0	n:1920000
Cons ci ratio: 2.469205e-01	ci left: 1.150561e-04	ci right 1.479412e-04	k: 251	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
NRAS   1920000 perm   1809 sec   (1061 perm/sec)   p_kst 5.208333e-07   p_cons 1.307292e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.911335e-06	k: 0	n:1930000
Cons ci ratio: 2.459464e-01	ci left: 1.154322e-04	ci right 1.482748e-04	k: 253	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
NRAS   1930000 perm   1826 sec   (1057 perm/sec)   p_kst 5.181347e-07   p_cons 1.310881e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.901482e-06	k: 0	n:1940000
Cons ci ratio: 2.449838e-01	ci left: 1.158048e-04	ci right 1.486047e-04	k: 255	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
NRAS   1940000 perm   1843 sec   (1053 perm/sec)   p_kst 5.154639e-07   p_cons 1.314433e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.891731e-06	k: 0	n:1950000
Cons ci ratio: 2.435607e-01	ci left: 1.166552e-04	ci right 1.494750e-04	k: 258	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
NRAS   1950000 perm   1860 sec   (1048 perm/sec)   p_kst 5.128205e-07   p_cons 1.323077e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.882080e-06	k: 0	n:1960000
Cons ci ratio: 2.426257e-01	ci left: 1.170183e-04	ci right 1.497949e-04	k: 260	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
NRAS   1960000 perm   1877 sec   (1044 perm/sec)   p_kst 5.102041e-07   p_cons 1.326531e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.872526e-06	k: 0	n:1970000
Cons ci ratio: 2.412431e-01	ci left: 1.178548e-04	ci right 1.506495e-04	k: 263	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
NRAS   1970000 perm   1895 sec   (1040 perm/sec)   p_kst 5.076142e-07   p_cons 1.335025e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.863069e-06	k: 0	n:1980000
Cons ci ratio: 2.403344e-01	ci left: 1.182087e-04	ci right 1.509595e-04	k: 265	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
NRAS   1980000 perm   1912 sec   (1035 perm/sec)   p_kst 5.050505e-07   p_cons 1.338384e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.853707e-06	k: 0	n:1990000
Cons ci ratio: 2.403345e-01	ci left: 1.176147e-04	ci right 1.502009e-04	k: 265	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
NRAS   1990000 perm   1930 sec   (1031 perm/sec)   p_kst 5.025126e-07   p_cons 1.331658e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.844438e-06	k: 0	n:2000000
Cons ci ratio: 2.394360e-01	ci left: 1.179666e-04	ci right 1.505099e-04	k: 267	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
NRAS   2000000 perm   1947 sec   (1027 perm/sec)   p_kst 5.000000e-07   p_cons 1.335000e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.835262e-06	k: 0	n:2010000
Cons ci ratio: 2.381069e-01	ci left: 1.187829e-04	ci right 1.513428e-04	k: 270	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
NRAS   2010000 perm   1965 sec   (1023 perm/sec)   p_kst 4.975124e-07   p_cons 1.343284e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.826176e-06	k: 0	n:2020000
Cons ci ratio: 2.381070e-01	ci left: 1.181949e-04	ci right 1.505935e-04	k: 270	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
NRAS   2020000 perm   1982 sec   (1019 perm/sec)   p_kst 4.950495e-07   p_cons 1.336634e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.817180e-06	k: 0	n:2030000
Cons ci ratio: 2.381071e-01	ci left: 1.176126e-04	ci right 1.498517e-04	k: 270	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
NRAS   2030000 perm   1999 sec   (1015 perm/sec)   p_kst 4.926108e-07   p_cons 1.330049e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.808273e-06	k: 0	n:2040000
Cons ci ratio: 2.372333e-01	ci left: 1.179581e-04	ci right 1.501558e-04	k: 272	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
NRAS   2040000 perm   2017 sec   (1012 perm/sec)   p_kst 4.901961e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.799452e-06	k: 0	n:2050000
Cons ci ratio: 2.372333e-01	ci left: 1.173827e-04	ci right 1.494233e-04	k: 272	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
NRAS   2050000 perm   2034 sec   (1008 perm/sec)   p_kst 4.878049e-07   p_cons 1.326829e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.790717e-06	k: 0	n:2060000
Cons ci ratio: 2.368001e-01	ci left: 1.172695e-04	ci right 1.492122e-04	k: 273	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
NRAS   2060000 perm   2052 sec   (1004 perm/sec)   p_kst 4.854369e-07   p_cons 1.325243e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.782066e-06	k: 0	n:2070000
Cons ci ratio: 2.355142e-01	ci left: 1.180665e-04	ci right 1.500262e-04	k: 276	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
NRAS   2070000 perm   2069 sec   (1000 perm/sec)   p_kst 4.830918e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.773498e-06	k: 0	n:2080000
Cons ci ratio: 2.346685e-01	ci left: 1.184038e-04	ci right 1.503230e-04	k: 278	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
NRAS   2080000 perm   2088 sec   (996 perm/sec)   p_kst 4.807692e-07   p_cons 1.336538e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.765013e-06	k: 0	n:2090000
Cons ci ratio: 2.342491e-01	ci left: 1.182876e-04	ci right 1.501103e-04	k: 279	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
NRAS   2090000 perm   2106 sec   (992 perm/sec)   p_kst 4.784689e-07   p_cons 1.334928e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.756608e-06	k: 0	n:2100000
Cons ci ratio: 2.330041e-01	ci left: 1.190693e-04	ci right 1.509075e-04	k: 282	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
NRAS   2100000 perm   2124 sec   (989 perm/sec)   p_kst 4.761905e-07   p_cons 1.342857e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.748283e-06	k: 0	n:2110000
Cons ci ratio: 2.330041e-01	ci left: 1.185050e-04	ci right 1.501923e-04	k: 282	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
NRAS   2110000 perm   2142 sec   (985 perm/sec)   p_kst 4.739336e-07   p_cons 1.336493e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.740036e-06	k: 0	n:2120000
Cons ci ratio: 2.325936e-01	ci left: 1.183902e-04	ci right 1.499830e-04	k: 283	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
NRAS   2120000 perm   2160 sec   (981 perm/sec)   p_kst 4.716981e-07   p_cons 1.334906e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.731867e-06	k: 0	n:2130000
Cons ci ratio: 2.321852e-01	ci left: 1.182765e-04	ci right 1.497756e-04	k: 284	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
NRAS   2130000 perm   2178 sec   (978 perm/sec)   p_kst 4.694836e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.723774e-06	k: 0	n:2140000
Cons ci ratio: 2.309726e-01	ci left: 1.190444e-04	ci right 1.505588e-04	k: 287	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
NRAS   2140000 perm   2196 sec   (974 perm/sec)   p_kst 4.672897e-07   p_cons 1.341121e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.715756e-06	k: 0	n:2150000
Cons ci ratio: 2.309727e-01	ci left: 1.184907e-04	ci right 1.498585e-04	k: 287	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
NRAS   2150000 perm   2214 sec   (971 perm/sec)   p_kst 4.651163e-07   p_cons 1.334884e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.707813e-06	k: 0	n:2160000
Cons ci ratio: 2.309728e-01	ci left: 1.179421e-04	ci right 1.491647e-04	k: 287	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
NRAS   2160000 perm   2232 sec   (968 perm/sec)   p_kst 4.629630e-07   p_cons 1.328704e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.699943e-06	k: 0	n:2170000
Cons ci ratio: 2.305728e-01	ci left: 1.178328e-04	ci right 1.489648e-04	k: 288	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
NRAS   2170000 perm   2250 sec   (964 perm/sec)   p_kst 4.608295e-07   p_cons 1.327189e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.692145e-06	k: 0	n:2180000
Cons ci ratio: 2.297791e-01	ci left: 1.181568e-04	ci right 1.492517e-04	k: 290	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
NRAS   2180000 perm   2269 sec   (961 perm/sec)   p_kst 4.587156e-07   p_cons 1.330275e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.684418e-06	k: 0	n:2190000
Cons ci ratio: 2.293853e-01	ci left: 1.180477e-04	ci right 1.490530e-04	k: 291	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
NRAS   2190000 perm   2287 sec   (958 perm/sec)   p_kst 4.566210e-07   p_cons 1.328767e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.676762e-06	k: 0	n:2200000
Cons ci ratio: 2.293854e-01	ci left: 1.175111e-04	ci right 1.483755e-04	k: 291	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
NRAS   2200000 perm   2306 sec   (954 perm/sec)   p_kst 4.545455e-07   p_cons 1.322727e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.669175e-06	k: 0	n:2210000
Cons ci ratio: 2.286038e-01	ci left: 1.178324e-04	ci right 1.486609e-04	k: 293	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
NRAS   2210000 perm   2325 sec   (950 perm/sec)   p_kst 4.524887e-07   p_cons 1.325792e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.661656e-06	k: 0	n:2220000
Cons ci ratio: 2.278301e-01	ci left: 1.181510e-04	ci right 1.489436e-04	k: 295	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
NRAS   2220000 perm   2345 sec   (947 perm/sec)   p_kst 4.504505e-07   p_cons 1.328829e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.654205e-06	k: 0	n:2230000
Cons ci ratio: 2.278302e-01	ci left: 1.176212e-04	ci right 1.482757e-04	k: 295	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
NRAS   2230000 perm   2364 sec   (943 perm/sec)   p_kst 4.484305e-07   p_cons 1.322870e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.646820e-06	k: 0	n:2240000
Cons ci ratio: 2.278303e-01	ci left: 1.170961e-04	ci right 1.476137e-04	k: 295	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
NRAS   2240000 perm   2383 sec   (940 perm/sec)   p_kst 4.464286e-07   p_cons 1.316964e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.639501e-06	k: 0	n:2250000
Cons ci ratio: 2.270644e-01	ci left: 1.174139e-04	ci right 1.478971e-04	k: 297	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
NRAS   2250000 perm   2403 sec   (937 perm/sec)   p_kst 4.444444e-07   p_cons 1.320000e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.632246e-06	k: 0	n:2260000
Cons ci ratio: 2.259299e-01	ci left: 1.181465e-04	ci right 1.486453e-04	k: 300	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
NRAS   2260000 perm   2422 sec   (933 perm/sec)   p_kst 4.424779e-07   p_cons 1.327434e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.625056e-06	k: 0	n:2270000
Cons ci ratio: 2.251830e-01	ci left: 1.184573e-04	ci right 1.489213e-04	k: 302	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
NRAS   2270000 perm   2442 sec   (930 perm/sec)   p_kst 4.405286e-07   p_cons 1.330396e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.617928e-06	k: 0	n:2280000
Cons ci ratio: 2.251831e-01	ci left: 1.179378e-04	ci right 1.482681e-04	k: 302	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
NRAS   2280000 perm   2461 sec   (926 perm/sec)   p_kst 4.385965e-07   p_cons 1.324561e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.610863e-06	k: 0	n:2290000
Cons ci ratio: 2.244435e-01	ci left: 1.182470e-04	ci right 1.485431e-04	k: 304	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
NRAS   2290000 perm   2481 sec   (923 perm/sec)   p_kst 4.366812e-07   p_cons 1.327511e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.603859e-06	k: 0	n:2300000
Cons ci ratio: 2.237112e-01	ci left: 1.185536e-04	ci right 1.488156e-04	k: 306	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
NRAS   2300000 perm   2502 sec   (919 perm/sec)   p_kst 4.347826e-07   p_cons 1.330435e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.596916e-06	k: 0	n:2310000
Cons ci ratio: 2.233478e-01	ci left: 1.184491e-04	ci right 1.486284e-04	k: 307	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
NRAS   2310000 perm   2521 sec   (916 perm/sec)   p_kst 4.329004e-07   p_cons 1.329004e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.590033e-06	k: 0	n:2320000
Cons ci ratio: 2.229861e-01	ci left: 1.183454e-04	ci right 1.484429e-04	k: 308	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
NRAS   2320000 perm   2541 sec   (913 perm/sec)   p_kst 4.310345e-07   p_cons 1.327586e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.583209e-06	k: 0	n:2330000
Cons ci ratio: 2.226262e-01	ci left: 1.182427e-04	ci right 1.482589e-04	k: 309	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
NRAS   2330000 perm   2561 sec   (910 perm/sec)   p_kst 4.291845e-07   p_cons 1.326180e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.576443e-06	k: 0	n:2340000
Cons ci ratio: 2.226262e-01	ci left: 1.177374e-04	ci right 1.476253e-04	k: 309	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
NRAS   2340000 perm   2581 sec   (907 perm/sec)   p_kst 4.273504e-07   p_cons 1.320513e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.569735e-06	k: 0	n:2350000
Cons ci ratio: 2.215567e-01	ci left: 1.184420e-04	ci right 1.483446e-04	k: 312	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
NRAS   2350000 perm   2601 sec   (903 perm/sec)   p_kst 4.255319e-07   p_cons 1.327660e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.563083e-06	k: 0	n:2360000
Cons ci ratio: 2.205024e-01	ci left: 1.191410e-04	ci right 1.490575e-04	k: 315	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
NRAS   2360000 perm   2622 sec   (900 perm/sec)   p_kst 4.237288e-07   p_cons 1.334746e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.556488e-06	k: 0	n:2370000
Cons ci ratio: 2.198079e-01	ci left: 1.194356e-04	ci right 1.493189e-04	k: 317	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
NRAS   2370000 perm   2641 sec   (897 perm/sec)   p_kst 4.219409e-07   p_cons 1.337553e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.549948e-06	k: 0	n:2380000
Cons ci ratio: 2.191199e-01	ci left: 1.197279e-04	ci right 1.495779e-04	k: 319	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
NRAS   2380000 perm   2662 sec   (894 perm/sec)   p_kst 4.201681e-07   p_cons 1.340336e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.543463e-06	k: 0	n:2390000
Cons ci ratio: 2.180998e-01	ci left: 1.204135e-04	ci right 1.502759e-04	k: 322	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
NRAS   2390000 perm   2682 sec   (891 perm/sec)   p_kst 4.184100e-07   p_cons 1.347280e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.537032e-06	k: 0	n:2400000
Cons ci ratio: 2.177630e-01	ci left: 1.203057e-04	ci right 1.500891e-04	k: 323	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
NRAS   2400000 perm   2703 sec   (888 perm/sec)   p_kst 4.166667e-07   p_cons 1.345833e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.530654e-06	k: 0	n:2410000
Cons ci ratio: 2.174278e-01	ci left: 1.201988e-04	ci right 1.499039e-04	k: 324	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
NRAS   2410000 perm   2723 sec   (885 perm/sec)   p_kst 4.149378e-07   p_cons 1.344398e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.524329e-06	k: 0	n:2420000
Cons ci ratio: 2.170941e-01	ci left: 1.200929e-04	ci right 1.497201e-04	k: 325	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
NRAS   2420000 perm   2744 sec   (882 perm/sec)   p_kst 4.132231e-07   p_cons 1.342975e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.518056e-06	k: 0	n:2430000
Cons ci ratio: 2.167619e-01	ci left: 1.199878e-04	ci right 1.495378e-04	k: 326	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
NRAS   2430000 perm   2765 sec   (879 perm/sec)   p_kst 4.115226e-07   p_cons 1.341564e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.511835e-06	k: 0	n:2440000
Cons ci ratio: 2.164312e-01	ci left: 1.198837e-04	ci right 1.493570e-04	k: 327	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
NRAS   2440000 perm   2786 sec   (876 perm/sec)   p_kst 4.098361e-07   p_cons 1.340164e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.505664e-06	k: 0	n:2450000
Cons ci ratio: 2.164313e-01	ci left: 1.193943e-04	ci right 1.487474e-04	k: 327	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
NRAS   2450000 perm   2807 sec   (873 perm/sec)   p_kst 4.081633e-07   p_cons 1.334694e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.499543e-06	k: 0	n:2460000
Cons ci ratio: 2.164313e-01	ci left: 1.189090e-04	ci right 1.481427e-04	k: 327	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
NRAS   2460000 perm   2828 sec   (870 perm/sec)   p_kst 4.065041e-07   p_cons 1.329268e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.493472e-06	k: 0	n:2470000
Cons ci ratio: 2.157744e-01	ci left: 1.191935e-04	ci right 1.483964e-04	k: 329	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
NRAS   2470000 perm   2850 sec   (867 perm/sec)   p_kst 4.048583e-07   p_cons 1.331984e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.487450e-06	k: 0	n:2480000
Cons ci ratio: 2.154483e-01	ci left: 1.190943e-04	ci right 1.482230e-04	k: 330	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
NRAS   2480000 perm   2871 sec   (864 perm/sec)   p_kst 4.032258e-07   p_cons 1.330645e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.481477e-06	k: 0	n:2490000
Cons ci ratio: 2.148003e-01	ci left: 1.193760e-04	ci right 1.484742e-04	k: 332	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
NRAS   2490000 perm   2892 sec   (861 perm/sec)   p_kst 4.016064e-07   p_cons 1.333333e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.475551e-06	k: 0	n:2500000
Cons ci ratio: 2.148003e-01	ci left: 1.188985e-04	ci right 1.478803e-04	k: 332	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
NRAS   2500000 perm   2914 sec   (858 perm/sec)   p_kst 4.000000e-07   p_cons 1.328000e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.469672e-06	k: 0	n:2510000
Cons ci ratio: 2.144785e-01	ci left: 1.188017e-04	ci right 1.477109e-04	k: 333	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
NRAS   2510000 perm   2936 sec   (855 perm/sec)   p_kst 3.984064e-07   p_cons 1.326693e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.463840e-06	k: 0	n:2520000
Cons ci ratio: 2.141582e-01	ci left: 1.187058e-04	ci right 1.475429e-04	k: 334	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
NRAS   2520000 perm   2957 sec   (852 perm/sec)   p_kst 3.968254e-07   p_cons 1.325397e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.458054e-06	k: 0	n:2530000
Cons ci ratio: 2.135217e-01	ci left: 1.189848e-04	ci right 1.477925e-04	k: 336	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
NRAS   2530000 perm   2979 sec   (849 perm/sec)   p_kst 3.952569e-07   p_cons 1.328063e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.452314e-06	k: 0	n:2540000
Cons ci ratio: 2.128909e-01	ci left: 1.192617e-04	ci right 1.480400e-04	k: 338	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
NRAS   2540000 perm   3000 sec   (847 perm/sec)   p_kst 3.937008e-07   p_cons 1.330709e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.446618e-06	k: 0	n:2550000
Cons ci ratio: 2.128910e-01	ci left: 1.187940e-04	ci right 1.474594e-04	k: 338	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
NRAS   2550000 perm   3022 sec   (844 perm/sec)   p_kst 3.921569e-07   p_cons 1.325490e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.440968e-06	k: 0	n:2560000
Cons ci ratio: 2.128910e-01	ci left: 1.183300e-04	ci right 1.468834e-04	k: 338	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
NRAS   2560000 perm   3044 sec   (841 perm/sec)   p_kst 3.906250e-07   p_cons 1.320312e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.435361e-06	k: 0	n:2570000
Cons ci ratio: 2.128911e-01	ci left: 1.178696e-04	ci right 1.463119e-04	k: 338	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
NRAS   2570000 perm   3066 sec   (838 perm/sec)   p_kst 3.891051e-07   p_cons 1.315175e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.429797e-06	k: 0	n:2580000
Cons ci ratio: 2.128911e-01	ci left: 1.174127e-04	ci right 1.457448e-04	k: 338	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
NRAS   2580000 perm   3088 sec   (836 perm/sec)   p_kst 3.875969e-07   p_cons 1.310078e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.424277e-06	k: 0	n:2590000
Cons ci ratio: 2.125779e-01	ci left: 1.173249e-04	ci right 1.455887e-04	k: 339	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
NRAS   2590000 perm   3110 sec   (833 perm/sec)   p_kst 3.861004e-07   p_cons 1.308880e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.418799e-06	k: 0	n:2600000
Cons ci ratio: 2.125779e-01	ci left: 1.168737e-04	ci right 1.450288e-04	k: 339	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
NRAS   2600000 perm   3132 sec   (830 perm/sec)   p_kst 3.846154e-07   p_cons 1.303846e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.413363e-06	k: 0	n:2610000
Cons ci ratio: 2.119554e-01	ci left: 1.171514e-04	ci right 1.452801e-04	k: 341	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
NRAS   2610000 perm   3154 sec   (828 perm/sec)   p_kst 3.831418e-07   p_cons 1.306513e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.407968e-06	k: 0	n:2620000
Cons ci ratio: 2.116462e-01	ci left: 1.170657e-04	ci right 1.451275e-04	k: 342	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
NRAS   2620000 perm   3176 sec   (825 perm/sec)   p_kst 3.816794e-07   p_cons 1.305344e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.402615e-06	k: 0	n:2630000
Cons ci ratio: 2.110318e-01	ci left: 1.173408e-04	ci right 1.453763e-04	k: 344	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
NRAS   2630000 perm   3198 sec   (822 perm/sec)   p_kst 3.802281e-07   p_cons 1.307985e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.397302e-06	k: 0	n:2640000
Cons ci ratio: 2.104228e-01	ci left: 1.176139e-04	ci right 1.456231e-04	k: 346	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
NRAS   2640000 perm   3220 sec   (820 perm/sec)   p_kst 3.787879e-07   p_cons 1.310606e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.392029e-06	k: 0	n:2650000
Cons ci ratio: 2.104228e-01	ci left: 1.171701e-04	ci right 1.450736e-04	k: 346	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
NRAS   2650000 perm   3242 sec   (817 perm/sec)   p_kst 3.773585e-07   p_cons 1.305660e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.386796e-06	k: 0	n:2660000
Cons ci ratio: 2.101203e-01	ci left: 1.170858e-04	ci right 1.449239e-04	k: 347	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
NRAS   2660000 perm   3265 sec   (815 perm/sec)   p_kst 3.759398e-07   p_cons 1.304511e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.381602e-06	k: 0	n:2670000
Cons ci ratio: 2.092203e-01	ci left: 1.177118e-04	ci right 1.455636e-04	k: 350	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
NRAS   2670000 perm   3287 sec   (812 perm/sec)   p_kst 3.745318e-07   p_cons 1.310861e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.376447e-06	k: 0	n:2680000
Cons ci ratio: 2.089229e-01	ci left: 1.176262e-04	ci right 1.454131e-04	k: 351	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
NRAS   2680000 perm   3310 sec   (810 perm/sec)   p_kst 3.731343e-07   p_cons 1.309701e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.371330e-06	k: 0	n:2690000
Cons ci ratio: 2.270669e-01	ci left: 9.820857e-05	ci right 1.237059e-04	k: 297	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
NRAS   2690000 perm   3333 sec   (807 perm/sec)   p_kst 3.717472e-07   p_cons 1.104089e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.366251e-06	k: 0	n:2700000
Cons ci ratio: 2.259324e-01	ci left: 9.889291e-05	ci right 1.244218e-04	k: 300	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
NRAS   2700000 perm   3356 sec   (805 perm/sec)   p_kst 3.703704e-07   p_cons 1.111111e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.361209e-06	k: 0	n:2710000
Cons ci ratio: 2.255580e-01	ci left: 9.887613e-05	ci right 1.243525e-04	k: 301	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
NRAS   2710000 perm   3379 sec   (802 perm/sec)   p_kst 3.690037e-07   p_cons 1.110701e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.356205e-06	k: 0	n:2720000
Cons ci ratio: 2.251855e-01	ci left: 9.885951e-05	ci right 1.242837e-04	k: 302	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
NRAS   2720000 perm   3402 sec   (800 perm/sec)   p_kst 3.676471e-07   p_cons 1.110294e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.351237e-06	k: 0	n:2730000
Cons ci ratio: 2.248149e-01	ci left: 9.884304e-05	ci right 1.242154e-04	k: 303	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
NRAS   2730000 perm   3425 sec   (797 perm/sec)   p_kst 3.663004e-07   p_cons 1.109890e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.346305e-06	k: 0	n:2740000
Cons ci ratio: 2.244460e-01	ci left: 9.882673e-05	ci right 1.241475e-04	k: 304	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
NRAS   2740000 perm   3448 sec   (795 perm/sec)   p_kst 3.649635e-07   p_cons 1.109489e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.341410e-06	k: 0	n:2750000
Cons ci ratio: 2.244461e-01	ci left: 9.846736e-05	ci right 1.236961e-04	k: 304	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
NRAS   2750000 perm   3471 sec   (792 perm/sec)   p_kst 3.636364e-07   p_cons 1.105455e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.336550e-06	k: 0	n:2760000
Cons ci ratio: 2.240790e-01	ci left: 9.845256e-05	ci right 1.236305e-04	k: 305	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
NRAS   2760000 perm   3495 sec   (790 perm/sec)   p_kst 3.623188e-07   p_cons 1.105072e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.331725e-06	k: 0	n:2770000
Cons ci ratio: 2.240791e-01	ci left: 9.809713e-05	ci right 1.231842e-04	k: 305	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
NRAS   2770000 perm   3519 sec   (787 perm/sec)   p_kst 3.610108e-07   p_cons 1.101083e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.326934e-06	k: 0	n:2780000
Cons ci ratio: 2.233503e-01	ci left: 9.842338e-05	ci right 1.235008e-04	k: 307	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
NRAS   2780000 perm   3542 sec   (785 perm/sec)   p_kst 3.597122e-07   p_cons 1.104317e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.322178e-06	k: 0	n:2790000
Cons ci ratio: 2.229886e-01	ci left: 9.840899e-05	ci right 1.234365e-04	k: 308	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
NRAS   2790000 perm   3566 sec   (782 perm/sec)   p_kst 3.584229e-07   p_cons 1.103943e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.317456e-06	k: 0	n:2800000
Cons ci ratio: 2.229887e-01	ci left: 9.805753e-05	ci right 1.229957e-04	k: 308	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
NRAS   2800000 perm   3590 sec   (780 perm/sec)   p_kst 3.571429e-07   p_cons 1.100000e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.312768e-06	k: 0	n:2810000
Cons ci ratio: 2.226287e-01	ci left: 9.804458e-05	ci right 1.229337e-04	k: 309	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
NRAS   2810000 perm   3614 sec   (778 perm/sec)   p_kst 3.558719e-07   p_cons 1.099644e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.308112e-06	k: 0	n:2820000
Cons ci ratio: 2.226288e-01	ci left: 9.769691e-05	ci right 1.224978e-04	k: 309	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
NRAS   2820000 perm   3637 sec   (775 perm/sec)   p_kst 3.546099e-07   p_cons 1.095745e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.303490e-06	k: 0	n:2830000
Cons ci ratio: 2.226288e-01	ci left: 9.735168e-05	ci right 1.220649e-04	k: 309	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
NRAS   2830000 perm   3660 sec   (773 perm/sec)   p_kst 3.533569e-07   p_cons 1.091873e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.298900e-06	k: 0	n:2840000
Cons ci ratio: 2.226288e-01	ci left: 9.700890e-05	ci right 1.216351e-04	k: 309	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
NRAS   2840000 perm   3683 sec   (771 perm/sec)   p_kst 3.521127e-07   p_cons 1.088028e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.294343e-06	k: 0	n:2850000
Cons ci ratio: 2.222706e-01	ci left: 9.699984e-05	ci right 1.215787e-04	k: 310	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
NRAS   2850000 perm   3707 sec   (769 perm/sec)   p_kst 3.508772e-07   p_cons 1.087719e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.289817e-06	k: 0	n:2860000
Cons ci ratio: 2.219142e-01	ci left: 9.699088e-05	ci right 1.215227e-04	k: 311	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
NRAS   2860000 perm   3731 sec   (766 perm/sec)   p_kst 3.496503e-07   p_cons 1.087413e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.285323e-06	k: 0	n:2870000
Cons ci ratio: 2.208548e-01	ci left: 9.764027e-05	ci right 1.222024e-04	k: 314	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
NRAS   2870000 perm   3756 sec   (764 perm/sec)   p_kst 3.484321e-07   p_cons 1.094077e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.280860e-06	k: 0	n:2880000
Cons ci ratio: 2.201570e-01	ci left: 9.795734e-05	ci right 1.225108e-04	k: 316	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
NRAS   2880000 perm   3781 sec   (762 perm/sec)   p_kst 3.472222e-07   p_cons 1.097222e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.276428e-06	k: 0	n:2890000
Cons ci ratio: 2.201570e-01	ci left: 9.761838e-05	ci right 1.220869e-04	k: 316	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
NRAS   2890000 perm   3804 sec   (760 perm/sec)   p_kst 3.460208e-07   p_cons 1.093426e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.272027e-06	k: 0	n:2900000
Cons ci ratio: 2.198106e-01	ci left: 9.760760e-05	ci right 1.220297e-04	k: 317	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
NRAS   2900000 perm   3828 sec   (758 perm/sec)   p_kst 3.448276e-07   p_cons 1.093103e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.267655e-06	k: 0	n:2910000
Cons ci ratio: 2.198106e-01	ci left: 9.727217e-05	ci right 1.216104e-04	k: 317	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
NRAS   2910000 perm   3853 sec   (755 perm/sec)   p_kst 3.436426e-07   p_cons 1.089347e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.263314e-06	k: 0	n:2920000
Cons ci ratio: 2.191226e-01	ci left: 9.758633e-05	ci right 1.219164e-04	k: 319	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
NRAS   2920000 perm   3877 sec   (753 perm/sec)   p_kst 3.424658e-07   p_cons 1.092466e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.259002e-06	k: 0	n:2930000
Cons ci ratio: 2.191227e-01	ci left: 9.725327e-05	ci right 1.215003e-04	k: 319	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
NRAS   2930000 perm   3902 sec   (751 perm/sec)   p_kst 3.412969e-07   p_cons 1.088737e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.254720e-06	k: 0	n:2940000
Cons ci ratio: 2.184411e-01	ci left: 9.756548e-05	ci right 1.218046e-04	k: 321	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
NRAS   2940000 perm   3926 sec   (749 perm/sec)   p_kst 3.401361e-07   p_cons 1.091837e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.250467e-06	k: 0	n:2950000
Cons ci ratio: 2.181027e-01	ci left: 9.755520e-05	ci right 1.217491e-04	k: 322	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
NRAS   2950000 perm   3951 sec   (747 perm/sec)   p_kst 3.389831e-07   p_cons 1.091525e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.246242e-06	k: 0	n:2960000
Cons ci ratio: 2.174305e-01	ci left: 9.786445e-05	ci right 1.220503e-04	k: 324	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
NRAS   2960000 perm   3976 sec   (744 perm/sec)   p_kst 3.378378e-07   p_cons 1.094595e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.242046e-06	k: 0	n:2970000
Cons ci ratio: 2.174305e-01	ci left: 9.753494e-05	ci right 1.216394e-04	k: 324	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
NRAS   2970000 perm   4002 sec   (742 perm/sec)   p_kst 3.367003e-07   p_cons 1.090909e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.237878e-06	k: 0	n:2980000
Cons ci ratio: 2.170968e-01	ci left: 9.752495e-05	ci right 1.215850e-04	k: 325	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
NRAS   2980000 perm   4027 sec   (740 perm/sec)   p_kst 3.355705e-07   p_cons 1.090604e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.233738e-06	k: 0	n:2990000
Cons ci ratio: 2.170968e-01	ci left: 9.719878e-05	ci right 1.211783e-04	k: 325	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
NRAS   2990000 perm   4053 sec   (738 perm/sec)   p_kst 3.344482e-07   p_cons 1.086957e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.229626e-06	k: 0	n:3000000
Cons ci ratio: 2.167646e-01	ci left: 9.719001e-05	ci right 1.211258e-04	k: 326	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
NRAS   3000000 perm   4079 sec   (736 perm/sec)   p_kst 3.333333e-07   p_cons 1.086667e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.225541e-06	k: 0	n:3010000
Cons ci ratio: 2.164340e-01	ci left: 9.718132e-05	ci right 1.210736e-04	k: 327	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
NRAS   3010000 perm   4104 sec   (733 perm/sec)   p_kst 3.322259e-07   p_cons 1.086379e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.221483e-06	k: 0	n:3020000
Cons ci ratio: 2.157771e-01	ci left: 9.748594e-05	ci right 1.213708e-04	k: 329	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
NRAS   3020000 perm   4129 sec   (731 perm/sec)   p_kst 3.311258e-07   p_cons 1.089404e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.217451e-06	k: 0	n:3030000
Cons ci ratio: 2.154509e-01	ci left: 9.747641e-05	ci right 1.213180e-04	k: 330	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
NRAS   3030000 perm   4155 sec   (729 perm/sec)   p_kst 3.300330e-07   p_cons 1.089109e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.213446e-06	k: 0	n:3040000
Cons ci ratio: 2.148029e-01	ci left: 9.777822e-05	ci right 1.216122e-04	k: 332	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
NRAS   3040000 perm   4181 sec   (727 perm/sec)   p_kst 3.289474e-07   p_cons 1.092105e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.209468e-06	k: 0	n:3050000
Cons ci ratio: 2.144811e-01	ci left: 9.776788e-05	ci right 1.215590e-04	k: 333	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
NRAS   3050000 perm   4207 sec   (725 perm/sec)   p_kst 3.278689e-07   p_cons 1.091803e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.205515e-06	k: 0	n:3060000
Cons ci ratio: 2.144811e-01	ci left: 9.744837e-05	ci right 1.211617e-04	k: 333	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
NRAS   3060000 perm   4232 sec   (723 perm/sec)   p_kst 3.267974e-07   p_cons 1.088235e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.201589e-06	k: 0	n:3070000
Cons ci ratio: 2.141608e-01	ci left: 9.743920e-05	ci right 1.211103e-04	k: 334	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
NRAS   3070000 perm   4258 sec   (721 perm/sec)   p_kst 3.257329e-07   p_cons 1.087948e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.197687e-06	k: 0	n:3080000
Cons ci ratio: 2.138418e-01	ci left: 9.743012e-05	ci right 1.210591e-04	k: 335	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
NRAS   3080000 perm   4283 sec   (719 perm/sec)   p_kst 3.246753e-07   p_cons 1.087662e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.193811e-06	k: 0	n:3090000
Cons ci ratio: 2.135243e-01	ci left: 9.742112e-05	ci right 1.210082e-04	k: 336	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
NRAS   3090000 perm   4309 sec   (717 perm/sec)   p_kst 3.236246e-07   p_cons 1.087379e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.189960e-06	k: 0	n:3100000
Cons ci ratio: 2.128935e-01	ci left: 9.771757e-05	ci right 1.212974e-04	k: 338	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
NRAS   3100000 perm   4334 sec   (715 perm/sec)   p_kst 3.225806e-07   p_cons 1.090323e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.186134e-06	k: 0	n:3110000
Cons ci ratio: 2.125802e-01	ci left: 9.770778e-05	ci right 1.212461e-04	k: 339	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
NRAS   3110000 perm   4360 sec   (713 perm/sec)   p_kst 3.215434e-07   p_cons 1.090032e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.182332e-06	k: 0	n:3120000
Cons ci ratio: 2.119577e-01	ci left: 9.800156e-05	ci right 1.215325e-04	k: 341	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
NRAS   3120000 perm   4386 sec   (711 perm/sec)   p_kst 3.205128e-07   p_cons 1.092949e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.178555e-06	k: 0	n:3130000
Cons ci ratio: 2.119577e-01	ci left: 9.768846e-05	ci right 1.211442e-04	k: 341	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
NRAS   3130000 perm   4413 sec   (709 perm/sec)   p_kst 3.194888e-07   p_cons 1.089457e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.174802e-06	k: 0	n:3140000
Cons ci ratio: 2.110341e-01	ci left: 9.828216e-05	ci right 1.217644e-04	k: 344	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
NRAS   3140000 perm   4440 sec   (707 perm/sec)   p_kst 3.184713e-07   p_cons 1.095541e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.171072e-06	k: 0	n:3150000
Cons ci ratio: 2.107289e-01	ci left: 9.827085e-05	ci right 1.217120e-04	k: 345	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
NRAS   3150000 perm   4466 sec   (705 perm/sec)   p_kst 3.174603e-07   p_cons 1.095238e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.167366e-06	k: 0	n:3160000
Cons ci ratio: 2.101225e-01	ci left: 9.855943e-05	ci right 1.219931e-04	k: 347	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
NRAS   3160000 perm   4493 sec   (703 perm/sec)   p_kst 3.164557e-07   p_cons 1.098101e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.163684e-06	k: 0	n:3170000
Cons ci ratio: 2.098212e-01	ci left: 9.854739e-05	ci right 1.219402e-04	k: 348	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
NRAS   3170000 perm   4520 sec   (701 perm/sec)   p_kst 3.154574e-07   p_cons 1.097792e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.160024e-06	k: 0	n:3180000
Cons ci ratio: 2.092225e-01	ci left: 9.883342e-05	ci right 1.222187e-04	k: 350	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
NRAS   3180000 perm   4546 sec   (699 perm/sec)   p_kst 3.144654e-07   p_cons 1.100629e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.156388e-06	k: 0	n:3190000
Cons ci ratio: 2.092226e-01	ci left: 9.852360e-05	ci right 1.218355e-04	k: 350	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
NRAS   3190000 perm   4573 sec   (698 perm/sec)   p_kst 3.134796e-07   p_cons 1.097179e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.152774e-06	k: 0	n:3200000
Cons ci ratio: 2.086290e-01	ci left: 9.880802e-05	ci right 1.221124e-04	k: 352	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
NRAS   3200000 perm   4600 sec   (696 perm/sec)   p_kst 3.125000e-07   p_cons 1.100000e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.149183e-06	k: 0	n:3210000
Cons ci ratio: 2.074568e-01	ci left: 9.968140e-05	ci right 1.230430e-04	k: 356	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
NRAS   3210000 perm   4627 sec   (694 perm/sec)   p_kst 3.115265e-07   p_cons 1.109034e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.145614e-06	k: 0	n:3220000
Cons ci ratio: 2.068781e-01	ci left: 9.996073e-05	ci right 1.233141e-04	k: 358	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
NRAS   3220000 perm   4654 sec   (692 perm/sec)   p_kst 3.105590e-07   p_cons 1.111801e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.142067e-06	k: 0	n:3230000
Cons ci ratio: 2.065906e-01	ci left: 9.994482e-05	ci right 1.232580e-04	k: 359	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
NRAS   3230000 perm   4679 sec   (690 perm/sec)   p_kst 3.095975e-07   p_cons 1.111455e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.138542e-06	k: 0	n:3240000
Cons ci ratio: 2.063043e-01	ci left: 9.992904e-05	ci right 1.232021e-04	k: 360	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
NRAS   3240000 perm   4707 sec   (688 perm/sec)   p_kst 3.086420e-07   p_cons 1.111111e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.135039e-06	k: 0	n:3250000
Cons ci ratio: 2.057351e-01	ci left: 1.002052e-04	ci right 1.234701e-04	k: 362	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
NRAS   3250000 perm   4734 sec   (686 perm/sec)   p_kst 3.076923e-07   p_cons 1.113846e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.131557e-06	k: 0	n:3260000
Cons ci ratio: 2.057352e-01	ci left: 9.989782e-05	ci right 1.230914e-04	k: 362	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
NRAS   3260000 perm   4762 sec   (685 perm/sec)   p_kst 3.067485e-07   p_cons 1.110429e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.128097e-06	k: 0	n:3270000
Cons ci ratio: 2.054524e-01	ci left: 9.988239e-05	ci right 1.230365e-04	k: 363	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
NRAS   3270000 perm   4789 sec   (683 perm/sec)   p_kst 3.058104e-07   p_cons 1.110092e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.124658e-06	k: 0	n:3280000
Cons ci ratio: 2.054524e-01	ci left: 9.957787e-05	ci right 1.226614e-04	k: 363	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
NRAS   3280000 perm   4817 sec   (681 perm/sec)   p_kst 3.048780e-07   p_cons 1.106707e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.121239e-06	k: 0	n:3290000
Cons ci ratio: 2.051708e-01	ci left: 9.956353e-05	ci right 1.226081e-04	k: 364	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
NRAS   3290000 perm   4844 sec   (679 perm/sec)   p_kst 3.039514e-07   p_cons 1.106383e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.117842e-06	k: 0	n:3300000
Cons ci ratio: 2.046109e-01	ci left: 9.983679e-05	ci right 1.228737e-04	k: 366	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
NRAS   3300000 perm   4872 sec   (677 perm/sec)   p_kst 3.030303e-07   p_cons 1.109091e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.114464e-06	k: 0	n:3310000
Cons ci ratio: 2.043327e-01	ci left: 9.982181e-05	ci right 1.228200e-04	k: 367	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
NRAS   3310000 perm   4899 sec   (676 perm/sec)   p_kst 3.021148e-07   p_cons 1.108761e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.111108e-06	k: 0	n:3320000
Cons ci ratio: 2.037797e-01	ci left: 1.000928e-04	ci right 1.230832e-04	k: 369	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
NRAS   3320000 perm   4926 sec   (674 perm/sec)   p_kst 3.012048e-07   p_cons 1.111446e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.107771e-06	k: 0	n:3330000
Cons ci ratio: 2.037797e-01	ci left: 9.979220e-05	ci right 1.227136e-04	k: 369	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
NRAS   3330000 perm   4954 sec   (672 perm/sec)   p_kst 3.003003e-07   p_cons 1.108108e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.104454e-06	k: 0	n:3340000
Cons ci ratio: 2.032312e-01	ci left: 1.000617e-04	ci right 1.229755e-04	k: 371	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
NRAS   3340000 perm   4981 sec   (670 perm/sec)   p_kst 2.994012e-07   p_cons 1.110778e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.101157e-06	k: 0	n:3350000
Cons ci ratio: 2.026870e-01	ci left: 1.003297e-04	ci right 1.232357e-04	k: 373	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
NRAS   3350000 perm   5009 sec   (669 perm/sec)   p_kst 2.985075e-07   p_cons 1.113433e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.097880e-06	k: 0	n:3360000
Cons ci ratio: 2.021472e-01	ci left: 1.005962e-04	ci right 1.234943e-04	k: 375	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
NRAS   3360000 perm   5036 sec   (667 perm/sec)   p_kst 2.976190e-07   p_cons 1.116071e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.094622e-06	k: 0	n:3370000
Cons ci ratio: 2.018789e-01	ci left: 1.005794e-04	ci right 1.234395e-04	k: 376	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
NRAS   3370000 perm   5065 sec   (665 perm/sec)   p_kst 2.967359e-07   p_cons 1.115727e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.091384e-06	k: 0	n:3380000
Cons ci ratio: 2.013456e-01	ci left: 1.008437e-04	ci right 1.236959e-04	k: 378	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
NRAS   3380000 perm   5093 sec   (664 perm/sec)   p_kst 2.958580e-07   p_cons 1.118343e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.088164e-06	k: 0	n:3390000
Cons ci ratio: 2.010805e-01	ci left: 1.008263e-04	ci right 1.236408e-04	k: 379	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
NRAS   3390000 perm   5121 sec   (662 perm/sec)   p_kst 2.949853e-07   p_cons 1.117994e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.084964e-06	k: 0	n:3400000
Cons ci ratio: 2.010805e-01	ci left: 1.005298e-04	ci right 1.232772e-04	k: 379	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
NRAS   3400000 perm   5150 sec   (660 perm/sec)   p_kst 2.941176e-07   p_cons 1.114706e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.081782e-06	k: 0	n:3410000
Cons ci ratio: 2.008164e-01	ci left: 1.005135e-04	ci right 1.232237e-04	k: 380	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
NRAS   3410000 perm   5178 sec   (659 perm/sec)   p_kst 2.932551e-07   p_cons 1.114370e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.078619e-06	k: 0	n:3420000
Cons ci ratio: 2.008165e-01	ci left: 1.002196e-04	ci right 1.228634e-04	k: 380	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
NRAS   3420000 perm   5206 sec   (657 perm/sec)   p_kst 2.923977e-07   p_cons 1.111111e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.075474e-06	k: 0	n:3430000
Cons ci ratio: 2.005534e-01	ci left: 1.002043e-04	ci right 1.228113e-04	k: 381	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
NRAS   3430000 perm   5235 sec   (655 perm/sec)   p_kst 2.915452e-07   p_cons 1.110787e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.072348e-06	k: 0	n:3440000
Cons ci ratio: 1.997705e-01	ci left: 1.007414e-04	ci right 1.233701e-04	k: 384	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
NRAS   3440000 perm   5264 sec   (653 perm/sec)   p_kst 2.906977e-07   p_cons 1.116279e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.069240e-06	k: 0	n:3450000
Cons ci ratio: 1.989966e-01	ci left: 1.012755e-04	ci right 1.239254e-04	k: 387	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
NRAS   3450000 perm   5293 sec   (652 perm/sec)   p_kst 2.898551e-07   p_cons 1.121739e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.066150e-06	k: 0	n:3460000
Cons ci ratio: 1.984857e-01	ci left: 1.015321e-04	ci right 1.241740e-04	k: 389	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
NRAS   3460000 perm   5323 sec   (650 perm/sec)   p_kst 2.890173e-07   p_cons 1.124277e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.063077e-06	k: 0	n:3470000
Cons ci ratio: 1.984857e-01	ci left: 1.012395e-04	ci right 1.238161e-04	k: 389	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
NRAS   3470000 perm   5351 sec   (648 perm/sec)   p_kst 2.881844e-07   p_cons 1.121037e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.060022e-06	k: 0	n:3480000
Cons ci ratio: 1.982318e-01	ci left: 1.012217e-04	ci right 1.237619e-04	k: 390	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
NRAS   3480000 perm   5381 sec   (647 perm/sec)   p_kst 2.873563e-07   p_cons 1.120690e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.056985e-06	k: 0	n:3490000
Cons ci ratio: 1.982318e-01	ci left: 1.009316e-04	ci right 1.234073e-04	k: 390	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
NRAS   3490000 perm   5409 sec   (645 perm/sec)   p_kst 2.865330e-07   p_cons 1.117479e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.053965e-06	k: 0	n:3500000
Cons ci ratio: 1.977267e-01	ci left: 1.011863e-04	ci right 1.236544e-04	k: 392	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
NRAS   3500000 perm   5438 sec   (644 perm/sec)   p_kst 2.857143e-07   p_cons 1.120000e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.050962e-06	k: 0	n:3510000
Cons ci ratio: 1.974756e-01	ci left: 1.011689e-04	ci right 1.236011e-04	k: 393	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
NRAS   3510000 perm   5468 sec   (642 perm/sec)   p_kst 2.849003e-07   p_cons 1.119658e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.047977e-06	k: 0	n:3520000
Cons ci ratio: 1.972255e-01	ci left: 1.011515e-04	ci right 1.235481e-04	k: 394	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
NRAS   3520000 perm   5497 sec   (640 perm/sec)   p_kst 2.840909e-07   p_cons 1.119318e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.045008e-06	k: 0	n:3530000
Cons ci ratio: 1.969763e-01	ci left: 1.011343e-04	ci right 1.234954e-04	k: 395	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
NRAS   3530000 perm   5526 sec   (639 perm/sec)   p_kst 2.832861e-07   p_cons 1.118980e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.042056e-06	k: 0	n:3540000
Cons ci ratio: 1.964808e-01	ci left: 1.013857e-04	ci right 1.237393e-04	k: 397	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
NRAS   3540000 perm   5556 sec   (637 perm/sec)   p_kst 2.824859e-07   p_cons 1.121469e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.039120e-06	k: 0	n:3550000
Cons ci ratio: 1.959889e-01	ci left: 1.016358e-04	ci right 1.239817e-04	k: 399	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
NRAS   3550000 perm   5585 sec   (636 perm/sec)   p_kst 2.816901e-07   p_cons 1.123944e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.036202e-06	k: 0	n:3560000
Cons ci ratio: 1.950162e-01	ci left: 1.024189e-04	ci right 1.248120e-04	k: 403	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
NRAS   3560000 perm   5615 sec   (634 perm/sec)   p_kst 2.808989e-07   p_cons 1.132022e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.033299e-06	k: 0	n:3570000
Cons ci ratio: 1.950162e-01	ci left: 1.021321e-04	ci right 1.244624e-04	k: 403	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
NRAS   3570000 perm   5645 sec   (632 perm/sec)   p_kst 2.801120e-07   p_cons 1.128852e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.030413e-06	k: 0	n:3580000
Cons ci ratio: 1.945353e-01	ci left: 1.023782e-04	ci right 1.247006e-04	k: 405	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
NRAS   3580000 perm   5675 sec   (631 perm/sec)   p_kst 2.793296e-07   p_cons 1.131285e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.027542e-06	k: 0	n:3590000
Cons ci ratio: 1.942961e-01	ci left: 1.023580e-04	ci right 1.246453e-04	k: 406	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
NRAS   3590000 perm   5705 sec   (629 perm/sec)   p_kst 2.785515e-07   p_cons 1.130919e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.024688e-06	k: 0	n:3600000
Cons ci ratio: 1.942962e-01	ci left: 1.020737e-04	ci right 1.242991e-04	k: 406	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
NRAS   3600000 perm   5735 sec   (628 perm/sec)   p_kst 2.777778e-07   p_cons 1.127778e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.021850e-06	k: 0	n:3610000
Cons ci ratio: 1.940579e-01	ci left: 1.020545e-04	ci right 1.242452e-04	k: 407	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
NRAS   3610000 perm   5765 sec   (626 perm/sec)   p_kst 2.770083e-07   p_cons 1.127424e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.019027e-06	k: 0	n:3620000
Cons ci ratio: 1.935840e-01	ci left: 1.022982e-04	ci right 1.244813e-04	k: 409	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
NRAS   3620000 perm   5795 sec   (625 perm/sec)   p_kst 2.762431e-07   p_cons 1.129834e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.016220e-06	k: 0	n:3630000
Cons ci ratio: 1.933484e-01	ci left: 1.022786e-04	ci right 1.244271e-04	k: 410	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
NRAS   3630000 perm   5825 sec   (623 perm/sec)   p_kst 2.754821e-07   p_cons 1.129477e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.013428e-06	k: 0	n:3640000
Cons ci ratio: 1.928796e-01	ci left: 1.025205e-04	ci right 1.246613e-04	k: 412	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
NRAS   3640000 perm   5855 sec   (622 perm/sec)   p_kst 2.747253e-07   p_cons 1.131868e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.010651e-06	k: 0	n:3650000
Cons ci ratio: 1.928797e-01	ci left: 1.022396e-04	ci right 1.243198e-04	k: 412	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
NRAS   3650000 perm   5884 sec   (620 perm/sec)   p_kst 2.739726e-07   p_cons 1.128767e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.007890e-06	k: 0	n:3660000
Cons ci ratio: 1.919523e-01	ci left: 1.030005e-04	ci right 1.251256e-04	k: 416	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
NRAS   3660000 perm   5914 sec   (619 perm/sec)   p_kst 2.732240e-07   p_cons 1.136612e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.005144e-06	k: 0	n:3670000
Cons ci ratio: 1.917225e-01	ci left: 1.029792e-04	ci right 1.250702e-04	k: 417	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
NRAS   3670000 perm   5945 sec   (617 perm/sec)   p_kst 2.724796e-07   p_cons 1.136240e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.002412e-06	k: 0	n:3680000
Cons ci ratio: 1.912655e-01	ci left: 1.032168e-04	ci right 1.252998e-04	k: 419	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
NRAS   3680000 perm   5976 sec   (616 perm/sec)   p_kst 2.717391e-07   p_cons 1.138587e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.996958e-07	k: 0	n:3690000
Cons ci ratio: 1.912655e-01	ci left: 1.029371e-04	ci right 1.249602e-04	k: 419	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
NRAS   3690000 perm   6006 sec   (614 perm/sec)   p_kst 2.710027e-07   p_cons 1.135501e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.969940e-07	k: 0	n:3700000
Cons ci ratio: 1.905860e-01	ci left: 1.034309e-04	ci right 1.254720e-04	k: 422	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
NRAS   3700000 perm   6037 sec   (613 perm/sec)   p_kst 2.702703e-07   p_cons 1.140541e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.943066e-07	k: 0	n:3710000
Cons ci ratio: 1.903611e-01	ci left: 1.034088e-04	ci right 1.254162e-04	k: 423	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
NRAS   3710000 perm   6067 sec   (612 perm/sec)   p_kst 2.695418e-07   p_cons 1.140162e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.916338e-07	k: 0	n:3720000
Cons ci ratio: 1.903612e-01	ci left: 1.031309e-04	ci right 1.250791e-04	k: 423	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
NRAS   3720000 perm   6098 sec   (610 perm/sec)   p_kst 2.688172e-07   p_cons 1.137097e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.889752e-07	k: 0	n:3730000
Cons ci ratio: 1.896912e-01	ci left: 1.036204e-04	ci right 1.255862e-04	k: 426	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
NRAS   3730000 perm   6129 sec   (609 perm/sec)   p_kst 2.680965e-07   p_cons 1.142091e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.863309e-07	k: 0	n:3740000
Cons ci ratio: 1.894695e-01	ci left: 1.035980e-04	ci right 1.255305e-04	k: 427	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
NRAS   3740000 perm   6160 sec   (607 perm/sec)   p_kst 2.673797e-07   p_cons 1.141711e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.837007e-07	k: 0	n:3750000
Cons ci ratio: 1.892485e-01	ci left: 1.035758e-04	ci right 1.254750e-04	k: 428	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
NRAS   3750000 perm   6190 sec   (606 perm/sec)   p_kst 2.666667e-07   p_cons 1.141333e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.810845e-07	k: 0	n:3760000
Cons ci ratio: 1.890284e-01	ci left: 1.035537e-04	ci right 1.254199e-04	k: 429	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
NRAS   3760000 perm   6221 sec   (604 perm/sec)   p_kst 2.659574e-07   p_cons 1.140957e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.784821e-07	k: 0	n:3770000
Cons ci ratio: 1.885903e-01	ci left: 1.037844e-04	ci right 1.256427e-04	k: 431	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
NRAS   3770000 perm   6253 sec   (603 perm/sec)   p_kst 2.652520e-07   p_cons 1.143236e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.758936e-07	k: 0	n:3780000
Cons ci ratio: 1.885903e-01	ci left: 1.035099e-04	ci right 1.253104e-04	k: 431	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
NRAS   3780000 perm   6284 sec   (602 perm/sec)   p_kst 2.645503e-07   p_cons 1.140212e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.733186e-07	k: 0	n:3790000
Cons ci ratio: 1.885903e-01	ci left: 1.032368e-04	ci right 1.249797e-04	k: 431	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
NRAS   3790000 perm   6316 sec   (600 perm/sec)   p_kst 2.638522e-07   p_cons 1.137203e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.707573e-07	k: 0	n:3800000
Cons ci ratio: 1.885903e-01	ci left: 1.029651e-04	ci right 1.246508e-04	k: 431	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
NRAS   3800000 perm   6348 sec   (599 perm/sec)   p_kst 2.631579e-07   p_cons 1.134211e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.682094e-07	k: 0	n:3810000
Cons ci ratio: 1.885904e-01	ci left: 1.026948e-04	ci right 1.243237e-04	k: 431	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
NRAS   3810000 perm   6379 sec   (597 perm/sec)   p_kst 2.624672e-07   p_cons 1.131234e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.656748e-07	k: 0	n:3820000
Cons ci ratio: 1.885904e-01	ci left: 1.024260e-04	ci right 1.239982e-04	k: 431	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
NRAS   3820000 perm   6411 sec   (596 perm/sec)   p_kst 2.617801e-07   p_cons 1.128272e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.631534e-07	k: 0	n:3830000
Cons ci ratio: 1.883725e-01	ci left: 1.024074e-04	ci right 1.239479e-04	k: 432	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
NRAS   3830000 perm   6443 sec   (594 perm/sec)   p_kst 2.610966e-07   p_cons 1.127937e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.606452e-07	k: 0	n:3840000
Cons ci ratio: 1.883725e-01	ci left: 1.021407e-04	ci right 1.236251e-04	k: 432	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
NRAS   3840000 perm   6475 sec   (593 perm/sec)   p_kst 2.604167e-07   p_cons 1.125000e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.581500e-07	k: 0	n:3850000
Cons ci ratio: 1.879390e-01	ci left: 1.023704e-04	ci right 1.238479e-04	k: 434	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
NRAS   3850000 perm   6507 sec   (592 perm/sec)   p_kst 2.597403e-07   p_cons 1.127273e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.556678e-07	k: 0	n:3860000
Cons ci ratio: 1.875084e-01	ci left: 1.025990e-04	ci right 1.240695e-04	k: 436	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
NRAS   3860000 perm   6539 sec   (590 perm/sec)   p_kst 2.590674e-07   p_cons 1.129534e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.531984e-07	k: 0	n:3870000
Cons ci ratio: 1.866560e-01	ci left: 1.033190e-04	ci right 1.248308e-04	k: 440	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
NRAS   3870000 perm   6571 sec   (589 perm/sec)   p_kst 2.583979e-07   p_cons 1.136951e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.507417e-07	k: 0	n:3880000
Cons ci ratio: 1.860243e-01	ci left: 1.037899e-04	ci right 1.253183e-04	k: 443	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
NRAS   3880000 perm   6602 sec   (588 perm/sec)   p_kst 2.577320e-07   p_cons 1.141753e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.482976e-07	k: 0	n:3890000
Cons ci ratio: 1.858152e-01	ci left: 1.037682e-04	ci right 1.252652e-04	k: 444	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
NRAS   3890000 perm   6635 sec   (586 perm/sec)   p_kst 2.570694e-07   p_cons 1.141388e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.458661e-07	k: 0	n:3900000
Cons ci ratio: 1.858152e-01	ci left: 1.035021e-04	ci right 1.249440e-04	k: 444	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
NRAS   3900000 perm   6667 sec   (585 perm/sec)   p_kst 2.564103e-07   p_cons 1.138462e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.434470e-07	k: 0	n:3910000
Cons ci ratio: 1.856068e-01	ci left: 1.034813e-04	ci right 1.248921e-04	k: 445	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
NRAS   3910000 perm   6700 sec   (584 perm/sec)   p_kst 2.557545e-07   p_cons 1.138107e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.410402e-07	k: 0	n:3920000
Cons ci ratio: 1.849856e-01	ci left: 1.039471e-04	ci right 1.253742e-04	k: 448	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
NRAS   3920000 perm   6732 sec   (582 perm/sec)   p_kst 2.551020e-07   p_cons 1.142857e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.386457e-07	k: 0	n:3930000
Cons ci ratio: 1.847800e-01	ci left: 1.039253e-04	ci right 1.253214e-04	k: 449	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
NRAS   3930000 perm   6765 sec   (581 perm/sec)   p_kst 2.544529e-07   p_cons 1.142494e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.362634e-07	k: 0	n:3940000
Cons ci ratio: 1.843707e-01	ci left: 1.041457e-04	ci right 1.255344e-04	k: 451	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
NRAS   3940000 perm   6797 sec   (580 perm/sec)   p_kst 2.538071e-07   p_cons 1.144670e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.338931e-07	k: 0	n:3950000
Cons ci ratio: 1.837618e-01	ci left: 1.046065e-04	ci right 1.260111e-04	k: 454	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
NRAS   3950000 perm   6830 sec   (578 perm/sec)   p_kst 2.531646e-07   p_cons 1.149367e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.315348e-07	k: 0	n:3960000
Cons ci ratio: 1.833593e-01	ci left: 1.048242e-04	ci right 1.262211e-04	k: 456	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
NRAS   3960000 perm   6863 sec   (577 perm/sec)   p_kst 2.525253e-07   p_cons 1.151515e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.291883e-07	k: 0	n:3970000
Cons ci ratio: 1.825620e-01	ci left: 1.055216e-04	ci right 1.269568e-04	k: 460	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
NRAS   3970000 perm   6895 sec   (576 perm/sec)   p_kst 2.518892e-07   p_cons 1.158690e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.268537e-07	k: 0	n:3980000
Cons ci ratio: 1.823643e-01	ci left: 1.054962e-04	ci right 1.269005e-04	k: 461	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
NRAS   3980000 perm   6928 sec   (575 perm/sec)   p_kst 2.512563e-07   p_cons 1.158291e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.245308e-07	k: 0	n:3990000
Cons ci ratio: 1.821673e-01	ci left: 1.054710e-04	ci right 1.268445e-04	k: 462	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
NRAS   3990000 perm   6961 sec   (573 perm/sec)   p_kst 2.506266e-07   p_cons 1.157895e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.222194e-07	k: 0	n:4000000
Cons ci ratio: 1.821673e-01	ci left: 1.052073e-04	ci right 1.265274e-04	k: 462	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
NRAS   4000000 perm   6994 sec   (572 perm/sec)   p_kst 2.500000e-07   p_cons 1.155000e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.199196e-07	k: 0	n:4010000
Cons ci ratio: 1.815799e-01	ci left: 1.056590e-04	ci right 1.269940e-04	k: 465	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
NRAS   4010000 perm   7027 sec   (571 perm/sec)   p_kst 2.493766e-07   p_cons 1.159601e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.176313e-07	k: 0	n:4020000
Cons ci ratio: 1.813854e-01	ci left: 1.056337e-04	ci right 1.269382e-04	k: 466	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
NRAS   4020000 perm   7061 sec   (569 perm/sec)   p_kst 2.487562e-07   p_cons 1.159204e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.153543e-07	k: 0	n:4030000
Cons ci ratio: 1.813854e-01	ci left: 1.053715e-04	ci right 1.266232e-04	k: 466	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
NRAS   4030000 perm   7094 sec   (568 perm/sec)   p_kst 2.481390e-07   p_cons 1.156328e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.130886e-07	k: 0	n:4040000
Cons ci ratio: 1.811915e-01	ci left: 1.053470e-04	ci right 1.265685e-04	k: 467	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
NRAS   4040000 perm   7127 sec   (567 perm/sec)   p_kst 2.475248e-07   p_cons 1.155941e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.108340e-07	k: 0	n:4050000
Cons ci ratio: 1.811916e-01	ci left: 1.050869e-04	ci right 1.262560e-04	k: 467	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
NRAS   4050000 perm   7161 sec   (566 perm/sec)   p_kst 2.469136e-07   p_cons 1.153086e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.085906e-07	k: 0	n:4060000
Cons ci ratio: 1.808056e-01	ci left: 1.052983e-04	ci right 1.264599e-04	k: 469	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
NRAS   4060000 perm   7195 sec   (564 perm/sec)   p_kst 2.463054e-07   p_cons 1.155172e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.063582e-07	k: 0	n:4070000
Cons ci ratio: 1.806136e-01	ci left: 1.052742e-04	ci right 1.264060e-04	k: 470	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
NRAS   4070000 perm   7229 sec   (563 perm/sec)   p_kst 2.457002e-07   p_cons 1.154791e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.041367e-07	k: 0	n:4080000
Cons ci ratio: 1.804222e-01	ci left: 1.052502e-04	ci right 1.263524e-04	k: 471	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
NRAS   4080000 perm   7263 sec   (562 perm/sec)   p_kst 2.450980e-07   p_cons 1.154412e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.019261e-07	k: 0	n:4090000
Cons ci ratio: 1.798515e-01	ci left: 1.056933e-04	ci right 1.268100e-04	k: 474	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
NRAS   4090000 perm   7296 sec   (561 perm/sec)   p_kst 2.444988e-07   p_cons 1.158924e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.997263e-07	k: 0	n:4100000
Cons ci ratio: 1.796625e-01	ci left: 1.056684e-04	ci right 1.267555e-04	k: 475	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
NRAS   4100000 perm   7330 sec   (559 perm/sec)   p_kst 2.439024e-07   p_cons 1.158537e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.975372e-07	k: 0	n:4110000
Cons ci ratio: 1.794740e-01	ci left: 1.056437e-04	ci right 1.267014e-04	k: 476	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
NRAS   4110000 perm   7363 sec   (558 perm/sec)   p_kst 2.433090e-07   p_cons 1.158151e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.953587e-07	k: 0	n:4120000
Cons ci ratio: 1.792862e-01	ci left: 1.056191e-04	ci right 1.266474e-04	k: 477	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
NRAS   4120000 perm   7397 sec   (557 perm/sec)   p_kst 2.427184e-07   p_cons 1.157767e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.931908e-07	k: 0	n:4130000
Cons ci ratio: 1.792862e-01	ci left: 1.053634e-04	ci right 1.263408e-04	k: 477	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
NRAS   4130000 perm   7431 sec   (556 perm/sec)   p_kst 2.421308e-07   p_cons 1.154964e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.910333e-07	k: 0	n:4140000
Cons ci ratio: 1.789123e-01	ci left: 1.055703e-04	ci right 1.265403e-04	k: 479	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
NRAS   4140000 perm   7465 sec   (555 perm/sec)   p_kst 2.415459e-07   p_cons 1.157005e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.888862e-07	k: 0	n:4150000
Cons ci ratio: 1.787262e-01	ci left: 1.055461e-04	ci right 1.264872e-04	k: 480	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
NRAS   4150000 perm   7500 sec   (553 perm/sec)   p_kst 2.409639e-07   p_cons 1.156627e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.867495e-07	k: 0	n:4160000
Cons ci ratio: 1.783558e-01	ci left: 1.057517e-04	ci right 1.266853e-04	k: 482	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
NRAS   4160000 perm   7534 sec   (552 perm/sec)   p_kst 2.403846e-07   p_cons 1.158654e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.846230e-07	k: 0	n:4170000
Cons ci ratio: 1.779877e-01	ci left: 1.059563e-04	ci right 1.268825e-04	k: 484	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
NRAS   4170000 perm   7568 sec   (551 perm/sec)   p_kst 2.398082e-07   p_cons 1.160671e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.825067e-07	k: 0	n:4180000
Cons ci ratio: 1.778045e-01	ci left: 1.059314e-04	ci right 1.268288e-04	k: 485	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
NRAS   4180000 perm   7602 sec   (550 perm/sec)   p_kst 2.392344e-07   p_cons 1.160287e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.804004e-07	k: 0	n:4190000
Cons ci ratio: 1.776218e-01	ci left: 1.059066e-04	ci right 1.267754e-04	k: 486	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
NRAS   4190000 perm   7636 sec   (549 perm/sec)   p_kst 2.386635e-07   p_cons 1.159905e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.783042e-07	k: 0	n:4200000
Cons ci ratio: 1.774397e-01	ci left: 1.058820e-04	ci right 1.267222e-04	k: 487	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
NRAS   4200000 perm   7670 sec   (548 perm/sec)   p_kst 2.380952e-07   p_cons 1.159524e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.762180e-07	k: 0	n:4210000
Cons ci ratio: 1.774398e-01	ci left: 1.056305e-04	ci right 1.264212e-04	k: 487	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
NRAS   4210000 perm   7704 sec   (546 perm/sec)   p_kst 2.375297e-07   p_cons 1.156770e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.741417e-07	k: 0	n:4220000
Cons ci ratio: 1.774398e-01	ci left: 1.053802e-04	ci right 1.261217e-04	k: 487	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
NRAS   4220000 perm   7738 sec   (545 perm/sec)   p_kst 2.369668e-07   p_cons 1.154028e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.720751e-07	k: 0	n:4230000
Cons ci ratio: 1.768968e-01	ci left: 1.058088e-04	ci right 1.265641e-04	k: 490	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
NRAS   4230000 perm   7773 sec   (544 perm/sec)   p_kst 2.364066e-07   p_cons 1.158392e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.700184e-07	k: 0	n:4240000
Cons ci ratio: 1.767170e-01	ci left: 1.057847e-04	ci right 1.265119e-04	k: 491	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
NRAS   4240000 perm   7808 sec   (543 perm/sec)   p_kst 2.358491e-07   p_cons 1.158019e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.679713e-07	k: 0	n:4250000
Cons ci ratio: 1.765377e-01	ci left: 1.057607e-04	ci right 1.264599e-04	k: 492	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
NRAS   4250000 perm   7844 sec   (542 perm/sec)   p_kst 2.352941e-07   p_cons 1.157647e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.659338e-07	k: 0	n:4260000
Cons ci ratio: 1.765377e-01	ci left: 1.055124e-04	ci right 1.261631e-04	k: 492	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
NRAS   4260000 perm   7879 sec   (541 perm/sec)   p_kst 2.347418e-07   p_cons 1.154930e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.639058e-07	k: 0	n:4270000
Cons ci ratio: 1.765377e-01	ci left: 1.052653e-04	ci right 1.258676e-04	k: 492	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
NRAS   4270000 perm   7915 sec   (539 perm/sec)   p_kst 2.341920e-07   p_cons 1.152225e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.618874e-07	k: 0	n:4280000
Cons ci ratio: 1.760030e-01	ci left: 1.056894e-04	ci right 1.263053e-04	k: 495	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
NRAS   4280000 perm   7950 sec   (538 perm/sec)   p_kst 2.336449e-07   p_cons 1.156542e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.598783e-07	k: 0	n:4290000
Cons ci ratio: 1.760030e-01	ci left: 1.054430e-04	ci right 1.260109e-04	k: 495	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
NRAS   4290000 perm   7986 sec   (537 perm/sec)   p_kst 2.331002e-07   p_cons 1.153846e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.578786e-07	k: 0	n:4300000
Cons ci ratio: 1.758258e-01	ci left: 1.054201e-04	ci right 1.259607e-04	k: 496	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
NRAS   4300000 perm   8021 sec   (536 perm/sec)   p_kst 2.325581e-07   p_cons 1.153488e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.558881e-07	k: 0	n:4310000
Cons ci ratio: 1.756492e-01	ci left: 1.053973e-04	ci right 1.259106e-04	k: 497	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
NRAS   4310000 perm   8055 sec   (535 perm/sec)   p_kst 2.320186e-07   p_cons 1.153132e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.539069e-07	k: 0	n:4320000
Cons ci ratio: 1.756493e-01	ci left: 1.051533e-04	ci right 1.256192e-04	k: 497	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
NRAS   4320000 perm   8090 sec   (534 perm/sec)   p_kst 2.314815e-07   p_cons 1.150463e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.519348e-07	k: 0	n:4330000
Cons ci ratio: 1.754732e-01	ci left: 1.051313e-04	ci right 1.255701e-04	k: 498	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
NRAS   4330000 perm   8125 sec   (533 perm/sec)   p_kst 2.309469e-07   p_cons 1.150115e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.499719e-07	k: 0	n:4340000
Cons ci ratio: 1.751226e-01	ci left: 1.053297e-04	ci right 1.257618e-04	k: 500	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
NRAS   4340000 perm   8161 sec   (532 perm/sec)   p_kst 2.304147e-07   p_cons 1.152074e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.480179e-07	k: 0	n:4350000
Cons ci ratio: 1.747740e-01	ci left: 1.055272e-04	ci right 1.259526e-04	k: 502	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
NRAS   4350000 perm   8197 sec   (531 perm/sec)   p_kst 2.298851e-07   p_cons 1.154023e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.460729e-07	k: 0	n:4360000
Cons ci ratio: 1.747741e-01	ci left: 1.052851e-04	ci right 1.256637e-04	k: 502	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
NRAS   4360000 perm   8232 sec   (530 perm/sec)   p_kst 2.293578e-07   p_cons 1.151376e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.441368e-07	k: 0	n:4370000
Cons ci ratio: 1.746006e-01	ci left: 1.052630e-04	ci right 1.256150e-04	k: 503	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
NRAS   4370000 perm   8269 sec   (528 perm/sec)   p_kst 2.288330e-07   p_cons 1.151030e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.422096e-07	k: 0	n:4380000
Cons ci ratio: 1.746006e-01	ci left: 1.050227e-04	ci right 1.253282e-04	k: 503	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
NRAS   4380000 perm   8305 sec   (527 perm/sec)   p_kst 2.283105e-07   p_cons 1.148402e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.402911e-07	k: 0	n:4390000
Cons ci ratio: 1.746006e-01	ci left: 1.047835e-04	ci right 1.250427e-04	k: 503	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
NRAS   4390000 perm   8342 sec   (526 perm/sec)   p_kst 2.277904e-07   p_cons 1.145786e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.383813e-07	k: 0	n:4400000
Cons ci ratio: 1.742552e-01	ci left: 1.049800e-04	ci right 1.252329e-04	k: 505	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
NRAS   4400000 perm   8377 sec   (525 perm/sec)   p_kst 2.272727e-07   p_cons 1.147727e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.364803e-07	k: 0	n:4410000
Cons ci ratio: 1.740833e-01	ci left: 1.049589e-04	ci right 1.251856e-04	k: 506	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
NRAS   4410000 perm   8412 sec   (524 perm/sec)   p_kst 2.267574e-07   p_cons 1.147392e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.345878e-07	k: 0	n:4420000
Cons ci ratio: 1.740833e-01	ci left: 1.047214e-04	ci right 1.249023e-04	k: 506	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
NRAS   4420000 perm   8448 sec   (523 perm/sec)   p_kst 2.262443e-07   p_cons 1.144796e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.327038e-07	k: 0	n:4430000
Cons ci ratio: 1.739119e-01	ci left: 1.047009e-04	ci right 1.248559e-04	k: 507	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
NRAS   4430000 perm   8484 sec   (522 perm/sec)   p_kst 2.257336e-07   p_cons 1.144470e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.308284e-07	k: 0	n:4440000
Cons ci ratio: 1.737410e-01	ci left: 1.046805e-04	ci right 1.248098e-04	k: 508	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
NRAS   4440000 perm   8519 sec   (521 perm/sec)   p_kst 2.252252e-07   p_cons 1.144144e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.289613e-07	k: 0	n:4450000
Cons ci ratio: 1.732312e-01	ci left: 1.050902e-04	ci right 1.252327e-04	k: 511	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
NRAS   4450000 perm   8555 sec   (520 perm/sec)   p_kst 2.247191e-07   p_cons 1.148315e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.271027e-07	k: 0	n:4460000
Cons ci ratio: 1.732312e-01	ci left: 1.048545e-04	ci right 1.249519e-04	k: 511	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
NRAS   4460000 perm   8592 sec   (519 perm/sec)   p_kst 2.242152e-07   p_cons 1.145740e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.252523e-07	k: 0	n:4470000
Cons ci ratio: 1.730623e-01	ci left: 1.048340e-04	ci right 1.249058e-04	k: 512	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
NRAS   4470000 perm   8629 sec   (518 perm/sec)   p_kst 2.237136e-07   p_cons 1.145414e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.234103e-07	k: 0	n:4480000
Cons ci ratio: 1.727259e-01	ci left: 1.050271e-04	ci right 1.250927e-04	k: 514	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
NRAS   4480000 perm   8666 sec   (517 perm/sec)   p_kst 2.232143e-07   p_cons 1.147321e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.215764e-07	k: 0	n:4490000
Cons ci ratio: 1.722250e-01	ci left: 1.054325e-04	ci right 1.255110e-04	k: 517	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
NRAS   4490000 perm   8703 sec   (516 perm/sec)   p_kst 2.227171e-07   p_cons 1.151448e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.197507e-07	k: 0	n:4500000
Cons ci ratio: 1.720590e-01	ci left: 1.054108e-04	ci right 1.254639e-04	k: 518	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
NRAS   4500000 perm   8739 sec   (515 perm/sec)   p_kst 2.222222e-07   p_cons 1.151111e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.179330e-07	k: 0	n:4510000
Cons ci ratio: 1.718934e-01	ci left: 1.053893e-04	ci right 1.254170e-04	k: 519	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
NRAS   4510000 perm   8776 sec   (514 perm/sec)   p_kst 2.217295e-07   p_cons 1.150776e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.161234e-07	k: 0	n:4520000
Cons ci ratio: 1.718935e-01	ci left: 1.051561e-04	ci right 1.251395e-04	k: 519	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
NRAS   4520000 perm   8812 sec   (513 perm/sec)   p_kst 2.212389e-07   p_cons 1.148230e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.143218e-07	k: 0	n:4530000
Cons ci ratio: 1.713997e-01	ci left: 1.055578e-04	ci right 1.255539e-04	k: 522	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
NRAS   4530000 perm   8849 sec   (512 perm/sec)   p_kst 2.207506e-07   p_cons 1.152318e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.125282e-07	k: 0	n:4540000
Cons ci ratio: 1.707480e-01	ci left: 1.061686e-04	ci right 1.261961e-04	k: 526	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
NRAS   4540000 perm   8886 sec   (511 perm/sec)   p_kst 2.202643e-07   p_cons 1.158590e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.107424e-07	k: 0	n:4550000
Cons ci ratio: 1.701036e-01	ci left: 1.067769e-04	ci right 1.268354e-04	k: 530	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
NRAS   4550000 perm   8923 sec   (510 perm/sec)   p_kst 2.197802e-07   p_cons 1.164835e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.089645e-07	k: 0	n:4560000
Cons ci ratio: 1.699436e-01	ci left: 1.067527e-04	ci right 1.267858e-04	k: 531	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
NRAS   4560000 perm   8961 sec   (509 perm/sec)   p_kst 2.192982e-07   p_cons 1.164474e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.071943e-07	k: 0	n:4570000
Cons ci ratio: 1.699436e-01	ci left: 1.065191e-04	ci right 1.265084e-04	k: 531	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
NRAS   4570000 perm   8999 sec   (508 perm/sec)   p_kst 2.188184e-07   p_cons 1.161926e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.054319e-07	k: 0	n:4580000
Cons ci ratio: 1.694665e-01	ci left: 1.069138e-04	ci right 1.269150e-04	k: 534	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
NRAS   4580000 perm   9035 sec   (507 perm/sec)   p_kst 2.183406e-07   p_cons 1.165939e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.036771e-07	k: 0	n:4590000
Cons ci ratio: 1.693083e-01	ci left: 1.068895e-04	ci right 1.268656e-04	k: 535	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
NRAS   4590000 perm   9073 sec   (506 perm/sec)   p_kst 2.178649e-07   p_cons 1.165577e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.019300e-07	k: 0	n:4600000
Cons ci ratio: 1.689933e-01	ci left: 1.070735e-04	ci right 1.270430e-04	k: 537	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
NRAS   4600000 perm   9111 sec   (505 perm/sec)   p_kst 2.173913e-07   p_cons 1.167391e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.001904e-07	k: 0	n:4610000
Cons ci ratio: 1.683685e-01	ci left: 1.076723e-04	ci right 1.276717e-04	k: 541	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
NRAS   4610000 perm   9148 sec   (504 perm/sec)   p_kst 2.169197e-07   p_cons 1.173536e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.984584e-07	k: 0	n:4620000
Cons ci ratio: 1.682134e-01	ci left: 1.076465e-04	ci right 1.276209e-04	k: 542	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
NRAS   4620000 perm   9187 sec   (503 perm/sec)   p_kst 2.164502e-07   p_cons 1.173160e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.967339e-07	k: 0	n:4630000
Cons ci ratio: 1.682134e-01	ci left: 1.074140e-04	ci right 1.273452e-04	k: 542	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
NRAS   4630000 perm   9225 sec   (502 perm/sec)   p_kst 2.159827e-07   p_cons 1.170626e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.950168e-07	k: 0	n:4640000
Cons ci ratio: 1.682134e-01	ci left: 1.071826e-04	ci right 1.270708e-04	k: 542	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
NRAS   4640000 perm   9264 sec   (501 perm/sec)   p_kst 2.155172e-07   p_cons 1.168103e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.933071e-07	k: 0	n:4650000
Cons ci ratio: 1.682135e-01	ci left: 1.069521e-04	ci right 1.267975e-04	k: 542	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
NRAS   4650000 perm   9302 sec   (500 perm/sec)   p_kst 2.150538e-07   p_cons 1.165591e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.916047e-07	k: 0	n:4660000
Cons ci ratio: 1.682135e-01	ci left: 1.067225e-04	ci right 1.265254e-04	k: 542	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
NRAS   4660000 perm   9340 sec   (499 perm/sec)   p_kst 2.145923e-07   p_cons 1.163090e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.899096e-07	k: 0	n:4670000
Cons ci ratio: 1.679045e-01	ci left: 1.069043e-04	ci right 1.267007e-04	k: 544	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
NRAS   4670000 perm   9378 sec   (498 perm/sec)   p_kst 2.141328e-07   p_cons 1.164882e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.882218e-07	k: 0	n:4680000
Cons ci ratio: 1.675973e-01	ci left: 1.070852e-04	ci right 1.268753e-04	k: 546	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
NRAS   4680000 perm   9416 sec   (497 perm/sec)   p_kst 2.136752e-07   p_cons 1.166667e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.865412e-07	k: 0	n:4690000
Cons ci ratio: 1.674443e-01	ci left: 1.070612e-04	ci right 1.268269e-04	k: 547	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
NRAS   4690000 perm   9454 sec   (496 perm/sec)   p_kst 2.132196e-07   p_cons 1.166311e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.848677e-07	k: 0	n:4700000
Cons ci ratio: 1.672917e-01	ci left: 1.070373e-04	ci right 1.267787e-04	k: 548	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
NRAS   4700000 perm   9494 sec   (495 perm/sec)   p_kst 2.127660e-07   p_cons 1.165957e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.832013e-07	k: 0	n:4710000
Cons ci ratio: 1.672918e-01	ci left: 1.068100e-04	ci right 1.265096e-04	k: 548	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
NRAS   4710000 perm   9532 sec   (494 perm/sec)   p_kst 2.123142e-07   p_cons 1.163482e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.815419e-07	k: 0	n:4720000
Cons ci ratio: 1.672918e-01	ci left: 1.065837e-04	ci right 1.262415e-04	k: 548	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
NRAS   4720000 perm   9571 sec   (493 perm/sec)   p_kst 2.118644e-07   p_cons 1.161017e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.798896e-07	k: 0	n:4730000
Cons ci ratio: 1.671396e-01	ci left: 1.065609e-04	ci right 1.261949e-04	k: 549	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
NRAS   4730000 perm   9610 sec   (492 perm/sec)   p_kst 2.114165e-07   p_cons 1.160677e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.782443e-07	k: 0	n:4740000
Cons ci ratio: 1.666856e-01	ci left: 1.069426e-04	ci right 1.265880e-04	k: 552	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
NRAS   4740000 perm   9649 sec   (491 perm/sec)   p_kst 2.109705e-07   p_cons 1.164557e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.766059e-07	k: 0	n:4750000
Cons ci ratio: 1.665351e-01	ci left: 1.069192e-04	ci right 1.265408e-04	k: 553	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
NRAS   4750000 perm   9687 sec   (490 perm/sec)   p_kst 2.105263e-07   p_cons 1.164211e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.749744e-07	k: 0	n:4760000
Cons ci ratio: 1.665351e-01	ci left: 1.066946e-04	ci right 1.262750e-04	k: 553	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
NRAS   4760000 perm   9727 sec   (489 perm/sec)   p_kst 2.100840e-07   p_cons 1.161765e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.733497e-07	k: 0	n:4770000
Cons ci ratio: 1.665352e-01	ci left: 1.064709e-04	ci right 1.260102e-04	k: 553	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
NRAS   4770000 perm   9765 sec   (488 perm/sec)   p_kst 2.096436e-07   p_cons 1.159329e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.717318e-07	k: 0	n:4780000
Cons ci ratio: 1.662353e-01	ci left: 1.066492e-04	ci right 1.261824e-04	k: 555	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
NRAS   4780000 perm   9804 sec   (488 perm/sec)   p_kst 2.092050e-07   p_cons 1.161088e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.701207e-07	k: 0	n:4790000
Cons ci ratio: 1.660861e-01	ci left: 1.066266e-04	ci right 1.261364e-04	k: 556	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
NRAS   4790000 perm   9843 sec   (487 perm/sec)   p_kst 2.087683e-07   p_cons 1.160752e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.685163e-07	k: 0	n:4800000
Cons ci ratio: 1.660861e-01	ci left: 1.064045e-04	ci right 1.258737e-04	k: 556	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
NRAS   4800000 perm   9883 sec   (486 perm/sec)   p_kst 2.083333e-07   p_cons 1.158333e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.669185e-07	k: 0	n:4810000
Cons ci ratio: 1.659372e-01	ci left: 1.063825e-04	ci right 1.258285e-04	k: 557	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
NRAS   4810000 perm   9923 sec   (485 perm/sec)   p_kst 2.079002e-07   p_cons 1.158004e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.653274e-07	k: 0	n:4820000
Cons ci ratio: 1.659372e-01	ci left: 1.061618e-04	ci right 1.255674e-04	k: 557	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
NRAS   4820000 perm   9962 sec   (484 perm/sec)   p_kst 2.074689e-07   p_cons 1.155602e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.637429e-07	k: 0	n:4830000
Cons ci ratio: 1.656406e-01	ci left: 1.063389e-04	ci right 1.257387e-04	k: 559	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
NRAS   4830000 perm   10001 sec   (483 perm/sec)   p_kst 2.070393e-07   p_cons 1.157350e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.621649e-07	k: 0	n:4840000
Cons ci ratio: 1.656406e-01	ci left: 1.061192e-04	ci right 1.254789e-04	k: 559	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
NRAS   4840000 perm   10040 sec   (482 perm/sec)   p_kst 2.066116e-07   p_cons 1.154959e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.605934e-07	k: 0	n:4850000
Cons ci ratio: 1.651987e-01	ci left: 1.064933e-04	ci right 1.258643e-04	k: 562	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
NRAS   4850000 perm   10080 sec   (481 perm/sec)   p_kst 2.061856e-07   p_cons 1.158763e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.590284e-07	k: 0	n:4860000
Cons ci ratio: 1.651987e-01	ci left: 1.062742e-04	ci right 1.256054e-04	k: 562	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
NRAS   4860000 perm   10120 sec   (480 perm/sec)   p_kst 2.057613e-07   p_cons 1.156379e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.574698e-07	k: 0	n:4870000
Cons ci ratio: 1.651987e-01	ci left: 1.060560e-04	ci right 1.253474e-04	k: 562	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
NRAS   4870000 perm   10160 sec   (479 perm/sec)   p_kst 2.053388e-07   p_cons 1.154004e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.559176e-07	k: 0	n:4880000
Cons ci ratio: 1.650522e-01	ci left: 1.060351e-04	ci right 1.253040e-04	k: 563	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
NRAS   4880000 perm   10201 sec   (478 perm/sec)   p_kst 2.049180e-07   p_cons 1.153689e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.543718e-07	k: 0	n:4890000
Cons ci ratio: 1.650522e-01	ci left: 1.058183e-04	ci right 1.250477e-04	k: 563	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
NRAS   4890000 perm   10241 sec   (477 perm/sec)   p_kst 2.044990e-07   p_cons 1.151329e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.528323e-07	k: 0	n:4900000
Cons ci ratio: 1.649061e-01	ci left: 1.057980e-04	ci right 1.250050e-04	k: 564	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
NRAS   4900000 perm   10281 sec   (477 perm/sec)   p_kst 2.040816e-07   p_cons 1.151020e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.512990e-07	k: 0	n:4910000
Cons ci ratio: 1.643254e-01	ci left: 1.063636e-04	ci right 1.255986e-04	k: 568	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
NRAS   4910000 perm   10321 sec   (476 perm/sec)   p_kst 2.036660e-07   p_cons 1.156823e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.497720e-07	k: 0	n:4920000
Cons ci ratio: 1.640374e-01	ci left: 1.065372e-04	ci right 1.257665e-04	k: 570	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
NRAS   4920000 perm   10362 sec   (475 perm/sec)   p_kst 2.032520e-07   p_cons 1.158537e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.482511e-07	k: 0	n:4930000
Cons ci ratio: 1.637508e-01	ci left: 1.067102e-04	ci right 1.259337e-04	k: 572	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
NRAS   4930000 perm   10403 sec   (474 perm/sec)   p_kst 2.028398e-07   p_cons 1.160243e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.467365e-07	k: 0	n:4940000
Cons ci ratio: 1.636081e-01	ci left: 1.066883e-04	ci right 1.258895e-04	k: 573	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
NRAS   4940000 perm   10443 sec   (473 perm/sec)   p_kst 2.024291e-07   p_cons 1.159919e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.452279e-07	k: 0	n:4950000
Cons ci ratio: 1.634658e-01	ci left: 1.066665e-04	ci right 1.258455e-04	k: 574	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
NRAS   4950000 perm   10484 sec   (472 perm/sec)   p_kst 2.020202e-07   p_cons 1.159596e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.437254e-07	k: 0	n:4960000
Cons ci ratio: 1.633238e-01	ci left: 1.066448e-04	ci right 1.258016e-04	k: 575	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
NRAS   4960000 perm   10525 sec   (471 perm/sec)   p_kst 2.016129e-07   p_cons 1.159274e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.422290e-07	k: 0	n:4970000
Cons ci ratio: 1.629001e-01	ci left: 1.070092e-04	ci right 1.261767e-04	k: 578	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
NRAS   4970000 perm   10565 sec   (470 perm/sec)   p_kst 2.012072e-07   p_cons 1.162978e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.407386e-07	k: 0	n:4980000
Cons ci ratio: 1.626195e-01	ci left: 1.071796e-04	ci right 1.263413e-04	k: 580	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
NRAS   4980000 perm   10606 sec   (470 perm/sec)   p_kst 2.008032e-07   p_cons 1.164659e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.392541e-07	k: 0	n:4990000
Cons ci ratio: 1.624797e-01	ci left: 1.071571e-04	ci right 1.262967e-04	k: 581	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
NRAS   4990000 perm   10646 sec   (469 perm/sec)   p_kst 2.004008e-07   p_cons 1.164329e-04   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 7.377756e-07	k: 0	n:5000000
Cons ci ratio: 1.248259e-01	ci left: 1.848890e-04	ci right 2.096958e-04	k: 985	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
NRAS   5000000 perm   10688 sec   (468 perm/sec)   p_kst 2.000000e-07   p_cons 1.970000e-04   p_joint 0

Outputting figure to mutsig2_images.part000000000117/NRAS.26_586_5000000_2e-07_0.000197_0.png
                gene_name: NRAS
               theta_stop: 3.9 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 0.00020 
      ci_cons_bounds_left: 0.00018 
     ci_cons_bounds_right: 0.00021 
                  p_joint: 0 
     ci_joint_bounds_left: 0 
    ci_joint_bounds_right: 7.38e-07 

Current progress: 25 percent done.
NSD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.920806e-02	ci left: 7.985170e-01	ci right 8.141041e-01	k: 8064	n:10000
Cons ci ratio: 3.565409e-02	ci left: 5.373814e-01	ci right 5.569911e-01	k: 5472	n:10000
KS ci ratio: 1.486641e-02	ci left: 8.676433e-01	ci right 8.807378e-01	k: 8743	n:10000
NSD1   10000 perm   2 sec   (4017 perm/sec)   p_kst 8.743000e-01   p_cons 5.472000e-01   p_joint 8.064000e-01

Outputting figure to mutsig2_images.part000000000117/NSD1.3_8179_10000_0.8743_0.5472_0.8064.png
                gene_name: NSD1
               theta_stop: 0.036 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 0.81 
     ci_joint_bounds_left: 0.80 
    ci_joint_bounds_right: 0.81 

Current progress: 50 percent done.
NRXN1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.192571e-02	ci left: 7.532242e-01	ci right 7.700231e-01	k: 7617	n:10000
KS ci ratio: 1.497436e-02	ci left: 8.660086e-01	ci right 8.791735e-01	k: 8727	n:10000
NRXN1   10000 perm   2 sec   (5220 perm/sec)   p_kst 8.727000e-01   p_cons 7.617000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000117/NRXN1.2_4999_10000_0.8727_0.7617_1.png
                gene_name: NRXN1
               theta_stop: 0.022 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.75 
     ci_cons_bounds_right: 0.77 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
NRXN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.610624e-02	ci left: 8.485573e-01	ci right 8.624349e-01	k: 8556	n:10000
Cons ci ratio: 3.787610e-02	ci left: 5.072521e-01	ci right 5.269379e-01	k: 5171	n:10000
KS ci ratio: 4.376126e-02	ci left: 4.353266e-01	ci right 4.549054e-01	k: 4451	n:10000
NRXN2   10000 perm   2 sec   (4904 perm/sec)   p_kst 4.451000e-01   p_cons 5.171000e-01   p_joint 8.556000e-01

Outputting figure to mutsig2_images.part000000000117/NRXN2.2_5496_10000_0.4451_0.5171_0.8556.png
                gene_name: NRXN2
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.45 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.45 
                   p_cons: 0.52 
      ci_cons_bounds_left: 0.51 
     ci_cons_bounds_right: 0.53 
                  p_joint: 0.86 
     ci_joint_bounds_left: 0.85 
    ci_joint_bounds_right: 0.86 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000117
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 117 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1642>
Subject: Job 8704289: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1642>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000118> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:38:14 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000118.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000118.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 118  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000118.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    220.64 sec.
    Max Memory :      5843 MB
    Max Swap   :      8528 MB

    Max Processes  :         7
    Max Threads    :        94

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
118
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 118
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 118: processing genes 10585 - 10675
Calculating significance of each gene.
Using projection method.
10585	NTAN1	1
10586	NTF3	1
10587	NTF4	1
10588	NTHL1	1
10589	NTM	1
10590	NTN1	1
10591	NTN3	1
10592	NTN4	1
10593	NTN5	1
10594	NTNG1	1
10595	NTNG2	1
10596	NTRK1	1
10597	NTRK2	1
10598	NTRK3	1.937900e-01
10599	NTS	1
10600	NTSR1	1
10601	NTSR2	1
10602	NUAK1	1
10603	NUAK2	1
10604	NUB1	1
10605	NUBP1	1
10606	NUBP2	1
10607	NUBPL	1
10608	NUCB1	1
10609	NUCB2	1
10610	NUCKS1	1
10611	NUDC	1
10612	NUDCD1	1
10613	NUDCD2	1
10614	NUDCD3	1
10615	NUDT1	1
10616	NUDT10	1
10617	NUDT11	1
10618	NUDT12	1.263610e-01
10619	NUDT13	1
10620	NUDT14	1
10621	NUDT15	1
10622	NUDT16	1
10623	NUDT16L1	1
10624	NUDT17	1
10625	NUDT18	1
10626	NUDT19	1.319582e-01
10627	NUDT2	1
10628	NUDT21	1
10629	NUDT22	1
10630	NUDT3	1
10631	NUDT4	1
10632	NUDT5	1
10633	NUDT6	1
10634	NUDT7	1
10635	NUDT8	1.546191e-02
10636	NUDT9	1
10637	NUF2	1
10638	NUFIP1	1
10639	NUFIP2	2.045345e-01
10640	NUMA1	3.788676e-01
10641	NUMB	1
10642	NUMBL	1.074147e-01
10643	NUP107	1
10644	NUP133	9.431262e-02
10645	NUP153	1
10646	NUP155	1
10647	NUP160	1
10648	NUP188	1
10649	NUP205	1
10650	NUP210	1
10651	NUP210L	5.216821e-01
10652	NUP214	1.356920e-01
10653	NUP35	3.613489e-02
10654	NUP37	1
10655	NUP43	1
10656	NUP50	1
10657	NUP54	1
10658	NUP62	1
10659	NUP62CL	1
10660	NUP85	1
10661	NUP88	1
In gene NUP93 the following bins exceed PROBCAP:
    THCA-DJ-A2Q4-TP	categ 6	N = 2544    n = 1	mu =   3.42e-08
10662	NUP93	1.154801e-02
10663	NUP98	1
10664	NUPL1	1
10665	NUPL2	1
10666	NUPR1	1
10667	NUS1	1
10668	NUSAP1	1
10669	NUTF2	1
10670	NVL	1
10671	NWD1	2.012096e-01
10672	NXF1	1
10673	NXF3	2.859577e-02
10674	NXF5	1
10675	NXN	4.047224e-02
Done

Running MutSig 2:
Scatter job 118: processing genes 10585 - 10675
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
NUP133
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.418244e-02	ci left: 8.778686e-01	ci right 8.905067e-01	k: 8843	n:10000
KS ci ratio: 1.760380e-02	ci left: 8.247294e-01	ci right 8.394766e-01	k: 8322	n:10000
NUP133   10000 perm   2 sec   (5142 perm/sec)   p_kst 8.322000e-01   p_cons 8.843000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000118/NUP133.2_3575_10000_0.8322_0.8843_1.png
                gene_name: NUP133
               theta_stop: 0.018 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.84 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
NUP214
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.223702e-02	ci left: 5.868075e-01	ci right 6.061363e-01	k: 5965	n:10000
KS ci ratio: 1.915886e-02	ci left: 7.993290e-01	ci right 8.148917e-01	k: 8072	n:10000
NUP214   10000 perm   2 sec   (4591 perm/sec)   p_kst 8.072000e-01   p_cons 5.965000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000118/NUP214.2_6417_10000_0.8072_0.5965_1.png
                gene_name: NUP214
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.81 
        ci_ks_bounds_left: 0.80 
       ci_ks_bounds_right: 0.81 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
NUP93
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.261114e-01	ci left: 8.251809e-02	ci right 9.372320e-02	k: 880	n:10000
Cons ci ratio: 4.351411e-02	ci left: 4.381199e-01	ci right 4.577105e-01	k: 4479	n:10000
KS ci ratio: 4.002490e-01	ci left: 7.602648e-03	ci right 1.149110e-02	k: 94	n:10000
NUP93   10000 perm   2 sec   (5932 perm/sec)   p_kst 9.400000e-03   p_cons 4.479000e-01   p_joint 8.800000e-02

Joint ci ratio: 8.792318e-02	ci left: 8.641161e-02	ci right 9.440794e-02	k: 1807	n:20000
Cons ci ratio: 3.079043e-02	ci left: 4.406917e-01	ci right 4.545236e-01	k: 8952	n:20000
KS ci ratio: 2.757897e-01	ci left: 8.621064e-03	ci right 1.142415e-02	k: 199	n:20000
NUP93   20000 perm   4 sec   (5256 perm/sec)   p_kst 9.950000e-03   p_cons 4.476000e-01   p_joint 9.035000e-02

Joint ci ratio: 2.259482e-02	ci left: 4.951256e-01	ci right 5.064743e-01	k: 15024	n:30000
Cons ci ratio: 2.513083e-02	ci left: 4.421616e-01	ci right 4.534485e-01	k: 13434	n:30000
KS ci ratio: 2.271026e-01	ci left: 8.716294e-03	ci right 1.098015e-02	k: 294	n:30000
NUP93   30000 perm   6 sec   (5006 perm/sec)   p_kst 9.800000e-03   p_cons 4.478000e-01   p_joint 5.008000e-01

Joint ci ratio: 6.161136e-02	ci left: 8.906153e-02	ci right 9.474788e-02	k: 3675	n:40000
Cons ci ratio: 2.195670e-02	ci left: 4.385733e-01	ci right 4.483349e-01	k: 17738	n:40000
KS ci ratio: 1.955095e-01	ci left: 8.976763e-03	ci right 1.094536e-02	k: 397	n:40000
NUP93   40000 perm   8 sec   (4848 perm/sec)   p_kst 9.925000e-03   p_cons 4.434500e-01   p_joint 9.187500e-02

Joint ci ratio: 5.504764e-02	ci left: 8.953961e-02	ci right 9.462786e-02	k: 4603	n:50000
Cons ci ratio: 1.966153e-02	ci left: 4.385195e-01	ci right 4.472471e-01	k: 22144	n:50000
KS ci ratio: 1.778731e-01	ci left: 8.763884e-03	ci right 1.049376e-02	k: 480	n:50000
NUP93   50000 perm   11 sec   (4718 perm/sec)   p_kst 9.600000e-03   p_cons 4.428800e-01   p_joint 9.206000e-02

Joint ci ratio: 5.020044e-02	ci left: 8.992948e-02	ci right 9.457671e-02	k: 5534	n:60000
Cons ci ratio: 1.794842e-02	ci left: 4.389033e-01	ci right 4.468689e-01	k: 26573	n:60000
KS ci ratio: 1.612787e-01	ci left: 8.963225e-03	ci right 1.055140e-02	k: 584	n:60000
NUP93   60000 perm   13 sec   (4604 perm/sec)   p_kst 9.733333e-03   p_cons 4.428833e-01   p_joint 9.223333e-02

Joint ci ratio: 4.644691e-02	ci left: 9.020797e-02	ci right 9.451161e-02	k: 6464	n:70000
Cons ci ratio: 1.663722e-02	ci left: 4.386018e-01	ci right 4.459744e-01	k: 30960	n:70000
KS ci ratio: 1.472061e-01	ci left: 9.289904e-03	ci right 1.077970e-02	k: 701	n:70000
NUP93   70000 perm   16 sec   (4511 perm/sec)   p_kst 1.001429e-02   p_cons 4.422857e-01   p_joint 9.234286e-02

Joint ci ratio: 4.353344e-02	ci left: 9.001814e-02	ci right 9.403651e-02	k: 7361	n:80000
Cons ci ratio: 1.558321e-02	ci left: 4.381923e-01	ci right 4.450869e-01	k: 35331	n:80000
KS ci ratio: 1.369495e-01	ci left: 9.442829e-03	ci right 1.084304e-02	k: 810	n:80000
NUP93   80000 perm   18 sec   (4423 perm/sec)   p_kst 1.012500e-02   p_cons 4.416375e-01   p_joint 9.201250e-02

Joint ci ratio: 4.103078e-02	ci left: 9.018540e-02	ci right 9.397428e-02	k: 8286	n:90000
Cons ci ratio: 1.468520e-02	ci left: 4.386186e-01	ci right 4.451185e-01	k: 39768	n:90000
KS ci ratio: 1.290013e-01	ci left: 9.500038e-03	ci right 1.082071e-02	k: 913	n:90000
NUP93   90000 perm   21 sec   (4322 perm/sec)   p_kst 1.014444e-02   p_cons 4.418667e-01   p_joint 9.206667e-02

Joint ci ratio: 3.902047e-02	ci left: 8.987847e-02	ci right 9.346525e-02	k: 9166	n:100000
Cons ci ratio: 1.395019e-02	ci left: 4.381293e-01	ci right 4.442941e-01	k: 44121	n:100000
KS ci ratio: 1.230290e-01	ci left: 9.431335e-03	ci right 1.067733e-02	k: 1004	n:100000
NUP93   100000 perm   24 sec   (4240 perm/sec)   p_kst 1.004000e-02   p_cons 4.412100e-01   p_joint 9.166000e-02

Joint ci ratio: 3.732020e-02	ci left: 8.945085e-02	ci right 9.286165e-02	k: 10026	n:110000
Cons ci ratio: 1.328584e-02	ci left: 4.388351e-01	ci right 4.447134e-01	k: 48595	n:110000
KS ci ratio: 1.170632e-01	ci left: 9.499852e-03	ci right 1.068983e-02	k: 1109	n:110000
NUP93   110000 perm   26 sec   (4176 perm/sec)   p_kst 1.008182e-02   p_cons 4.417727e-01   p_joint 9.114545e-02

Joint ci ratio: 3.559290e-02	ci left: 9.016375e-02	ci right 9.343934e-02	k: 11015	n:120000
Cons ci ratio: 1.269742e-02	ci left: 4.398453e-01	ci right 4.454742e-01	k: 53119	n:120000
KS ci ratio: 1.118887e-01	ci left: 9.558165e-03	ci right 1.069903e-02	k: 1214	n:120000
NUP93   120000 perm   29 sec   (4115 perm/sec)   p_kst 1.011667e-02   p_cons 4.426583e-01   p_joint 9.179167e-02

Joint ci ratio: 3.418237e-02	ci left: 9.029674e-02	ci right 9.344457e-02	k: 11942	n:130000
Cons ci ratio: 1.219162e-02	ci left: 4.402664e-01	ci right 4.456746e-01	k: 57586	n:130000
KS ci ratio: 1.068553e-01	ci left: 9.698345e-03	ci right 1.080059e-02	k: 1331	n:130000
NUP93   130000 perm   32 sec   (4053 perm/sec)   p_kst 1.023846e-02   p_cons 4.429692e-01   p_joint 9.186154e-02

Joint ci ratio: 3.288086e-02	ci left: 9.064688e-02	ci right 9.368432e-02	k: 12902	n:140000
Cons ci ratio: 1.174657e-02	ci left: 4.404313e-01	ci right 4.456425e-01	k: 62025	n:140000
KS ci ratio: 1.021960e-01	ci left: 9.868214e-03	ci right 1.093792e-02	k: 1455	n:140000
NUP93   140000 perm   35 sec   (3990 perm/sec)   p_kst 1.039286e-02   p_cons 4.430357e-01   p_joint 9.215714e-02

Joint ci ratio: 3.172253e-02	ci left: 9.092582e-02	ci right 9.386329e-02	k: 13858	n:150000
Cons ci ratio: 1.134940e-02	ci left: 4.404707e-01	ci right 4.455049e-01	k: 66448	n:150000
KS ci ratio: 9.863490e-02	ci left: 9.905763e-03	ci right 1.093996e-02	k: 1562	n:150000
NUP93   150000 perm   38 sec   (3920 perm/sec)   p_kst 1.041333e-02   p_cons 4.429867e-01   p_joint 9.238667e-02

Outputting figure to mutsig2_images.part000000000118/NUP93.2_2544_150000_0.010413_0.44299_0.092387.png
                gene_name: NUP93
               theta_stop: 0.099 
                    nperm: 150000 
                     p_ks: 0.010 
        ci_ks_bounds_left: 0.0099 
       ci_ks_bounds_right: 0.011 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.092 
     ci_joint_bounds_left: 0.091 
    ci_joint_bounds_right: 0.094 

Current progress: 75 percent done.
NXF3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.905673e-02	ci left: 3.800254e-01	ci right 3.992390e-01	k: 3896	n:10000
KS ci ratio: 1.127940e-02	ci left: 9.182193e-01	ci right 9.287325e-01	k: 9236	n:10000
NXF3   10000 perm   2 sec   (6479 perm/sec)   p_kst 9.236000e-01   p_cons 3.896000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000118/NXF3.2_1672_10000_0.9236_0.3896_1.png
                gene_name: NXF3
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.92 
        ci_ks_bounds_left: 0.92 
       ci_ks_bounds_right: 0.93 
                   p_cons: 0.39 
      ci_cons_bounds_left: 0.38 
     ci_cons_bounds_right: 0.40 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000118
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 118 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1705>
Subject: Job 8704290: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1705>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000119> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:40:57 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000119.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000119.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 119  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000119.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    366.29 sec.
    Max Memory :      5760 MB
    Max Swap   :      8351 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
119
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 119
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 119: processing genes 10676 - 10765
Calculating significance of each gene.
Using projection method.
10676	NXNL1	1
10677	NXNL2	1
10678	NXPH1	1
10679	NXPH2	1
10680	NXPH3	1
10681	NXPH4	1
10682	NXT1	1
10683	NXT2	1
10684	NYNRIN	1
10685	NYX	1
10686	OAF	1
10687	OAS1	1.212608e-01
10688	OAS2	1
10689	OAS3	1.893984e-01
10690	OASL	1
10691	OAT	1
10692	OAZ1	1
10693	OAZ2	1
10694	OAZ3	1
10695	OBFC1	1
10696	OBFC2A	1
10697	OBFC2B	1
10698	OBP2A	1
10699	OBP2B	1
10700	OBSCN	8.679915e-01
10701	OBSL1	1
10702	OC90	1.855395e-02
10703	OCA2	1
10704	OCEL1	1
10705	OCIAD1	1
10706	OCIAD2	1
10707	OCLM	1
10708	OCLN	9.329681e-02
10709	OCM	1
10710	OCM2	1
10711	OCRL	8.847764e-02
10712	ODAM	1
10713	ODC1	1
10714	ODF1	1
10715	ODF2	1
10716	ODF2L	1
10717	ODF3	1
10718	ODF3B	1
10719	ODF3L1	1
10720	ODF3L2	1
10721	ODF4	1
10722	ODZ1	6.230813e-01
10723	ODZ2	5.706392e-01
10724	ODZ3	1
10725	ODZ4	1.733037e-01
10726	OFD1	1.725436e-01
10727	OGDH	3.633084e-01
In gene OGDHL the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 3100    n = 1	mu =   2.35e-07
10728	OGDHL	7.964117e-02
10729	OGFOD1	1.472147e-01
10730	OGFOD2	1
10731	OGFR	1
10732	OGFRL1	1
10733	OGG1	1
10734	OGN	1
10735	OGT	1
10736	OIP5	1
10737	OIT3	1
10738	OLA1	1
10739	OLAH	1
10740	OLFM1	1
10741	OLFM2	1
10742	OLFM3	1
10743	OLFM4	1
10744	OLFML1	1
10745	OLFML2A	1
10746	OLFML2B	3.116269e-01
10747	OLFML3	1
10748	OLIG2	1
10749	OLIG3	1
10750	OLR1	1
10751	OMA1	1
10752	OMD	1
10753	OMG	1
10754	OMP	1
10755	ONECUT1	1
10756	ONECUT2	1
10757	OOEP	1
10758	OPA1	2.773992e-01
10759	OPA3	1
10760	OPALIN	1
10761	OPCML	3.638333e-02
10762	OPHN1	1
10763	OPLAH	1.155421e-01
10764	OPN1LW	1
10765	OPN1MW	1
Done

Running MutSig 2:
Scatter job 119: processing genes 10676 - 10765
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
OBSCN
Processing conservation and coverage...
39% 78% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.606345e-01	ci left: 5.166964e-02	ci right 6.079103e-02	k: 561	n:10000
Cons ci ratio: 4.751436e-02	ci left: 3.952579e-01	ci right 4.145975e-01	k: 4049	n:10000
KS ci ratio: 4.208622e-01	ci left: 6.794980e-03	ci right 1.049980e-02	k: 85	n:10000
OBSCN   10000 perm   5 sec   (2169 perm/sec)   p_kst 8.500000e-03   p_cons 4.049000e-01   p_joint 5.610000e-02

Joint ci ratio: 1.654508e-01	ci left: 2.503753e-02	ci right 2.960129e-02	k: 545	n:20000
Cons ci ratio: 3.338574e-02	ci left: 4.011776e-01	ci right 4.148492e-01	k: 8160	n:20000
KS ci ratio: 3.116120e-01	ci left: 6.627764e-03	ci right 9.118513e-03	k: 156	n:20000
OBSCN   20000 perm   12 sec   (1660 perm/sec)   p_kst 7.800000e-03   p_cons 4.080000e-01   p_joint 2.725000e-02

Joint ci ratio: 1.180807e-01	ci left: 3.333738e-02	ci right 3.755320e-02	k: 1062	n:30000
Cons ci ratio: 2.722637e-02	ci left: 4.030298e-01	ci right 4.141879e-01	k: 12258	n:30000
KS ci ratio: 2.591891e-01	ci left: 6.586143e-03	ci right 8.577669e-03	k: 226	n:30000
OBSCN   30000 perm   18 sec   (1688 perm/sec)   p_kst 7.533333e-03   p_cons 4.086000e-01   p_joint 3.540000e-02

Joint ci ratio: 1.296295e-01	ci left: 2.089945e-02	ci right 2.382047e-02	k: 893	n:40000
Cons ci ratio: 2.354255e-02	ci left: 4.045255e-01	ci right 4.141876e-01	k: 16374	n:40000
KS ci ratio: 2.446932e-01	ci left: 5.595075e-03	ci right 7.177869e-03	k: 254	n:40000
OBSCN   40000 perm   23 sec   (1740 perm/sec)   p_kst 6.350000e-03   p_cons 4.093500e-01   p_joint 2.232500e-02

Joint ci ratio: 1.224023e-01	ci left: 1.886839e-02	ci right 2.134777e-02	k: 1004	n:50000
Cons ci ratio: 2.107864e-02	ci left: 4.045462e-01	ci right 4.131844e-01	k: 20443	n:50000
KS ci ratio: 2.187745e-01	ci left: 5.681986e-03	ci right 7.096242e-03	k: 318	n:50000
OBSCN   50000 perm   28 sec   (1766 perm/sec)   p_kst 6.360000e-03   p_cons 4.088600e-01   p_joint 2.008000e-02

Joint ci ratio: 1.056011e-01	ci left: 2.126321e-02	ci right 2.364996e-02	k: 1346	n:60000
Cons ci ratio: 1.923530e-02	ci left: 4.050955e-01	ci right 4.129800e-01	k: 24542	n:60000
KS ci ratio: 1.965847e-01	ci left: 5.936022e-03	ci right 7.245724e-03	k: 394	n:60000
OBSCN   60000 perm   34 sec   (1778 perm/sec)   p_kst 6.566667e-03   p_cons 4.090333e-01   p_joint 2.243333e-02

Joint ci ratio: 9.337833e-02	ci left: 2.340924e-02	ci right 2.571611e-02	k: 1718	n:70000
Cons ci ratio: 1.785877e-02	ci left: 4.040279e-01	ci right 4.113226e-01	k: 28537	n:70000
KS ci ratio: 1.829706e-01	ci left: 5.918082e-03	ci right 7.123373e-03	k: 455	n:70000
OBSCN   70000 perm   39 sec   (1781 perm/sec)   p_kst 6.500000e-03   p_cons 4.076714e-01   p_joint 2.454286e-02

Joint ci ratio: 9.098805e-02	ci left: 2.164230e-02	ci right 2.371751e-02	k: 1813	n:80000
Cons ci ratio: 1.745063e-02	ci left: 3.833982e-01	ci right 3.901601e-01	k: 30942	n:80000
KS ci ratio: 1.713427e-01	ci left: 5.942882e-03	ci right 7.068356e-03	k: 519	n:80000
OBSCN   80000 perm   45 sec   (1781 perm/sec)   p_kst 6.487500e-03   p_cons 3.867750e-01   p_joint 2.266250e-02

Joint ci ratio: 9.029582e-02	ci left: 1.958415e-02	ci right 2.144694e-02	k: 1845	n:90000
Cons ci ratio: 1.648807e-02	ci left: 3.825735e-01	ci right 3.889449e-01	k: 34718	n:90000
KS ci ratio: 1.607161e-01	ci left: 6.038720e-03	ci right 7.104569e-03	k: 590	n:90000
OBSCN   90000 perm   51 sec   (1779 perm/sec)   p_kst 6.555556e-03   p_cons 3.857556e-01   p_joint 2.050000e-02

Joint ci ratio: 7.893240e-02	ci left: 2.311908e-02	ci right 2.502866e-02	k: 2406	n:100000
Cons ci ratio: 1.562799e-02	ci left: 3.831607e-01	ci right 3.892059e-01	k: 38618	n:100000
KS ci ratio: 1.527813e-01	ci left: 6.040147e-03	ci right 7.048795e-03	k: 653	n:100000
OBSCN   100000 perm   56 sec   (1771 perm/sec)   p_kst 6.530000e-03   p_cons 3.861800e-01   p_joint 2.406000e-02

Joint ci ratio: 8.507229e-02	ci left: 1.813015e-02	ci right 1.974990e-02	k: 2082	n:110000
Cons ci ratio: 1.489325e-02	ci left: 3.835392e-01	ci right 3.893032e-01	k: 42506	n:110000
KS ci ratio: 1.453058e-01	ci left: 6.094945e-03	ci right 7.058621e-03	k: 722	n:110000
OBSCN   110000 perm   62 sec   (1765 perm/sec)   p_kst 6.563636e-03   p_cons 3.864182e-01   p_joint 1.892727e-02

Joint ci ratio: 8.923968e-02	ci left: 1.511830e-02	ci right 1.653857e-02	k: 1898	n:120000
Cons ci ratio: 1.427356e-02	ci left: 3.831859e-01	ci right 3.887029e-01	k: 46313	n:120000
KS ci ratio: 1.379561e-01	ci left: 6.222076e-03	ci right 7.152005e-03	k: 801	n:120000
OBSCN   120000 perm   68 sec   (1757 perm/sec)   p_kst 6.675000e-03   p_cons 3.859417e-01   p_joint 1.581667e-02

Joint ci ratio: 7.576335e-02	ci left: 1.941192e-02	ci right 2.094805e-02	k: 2622	n:130000
Cons ci ratio: 1.372038e-02	ci left: 3.830604e-01	ci right 3.883601e-01	k: 50142	n:130000
KS ci ratio: 1.313943e-01	ci left: 6.353008e-03	ci right 7.253819e-03	k: 883	n:130000
OBSCN   130000 perm   74 sec   (1749 perm/sec)   p_kst 6.792308e-03   p_cons 3.857077e-01   p_joint 2.016923e-02

Joint ci ratio: 7.874537e-02	ci left: 1.670750e-02	ci right 1.808402e-02	k: 2434	n:140000
Cons ci ratio: 1.321833e-02	ci left: 3.832632e-01	ci right 3.883701e-01	k: 54014	n:140000
KS ci ratio: 1.261487e-01	ci left: 6.417696e-03	ci right 7.288632e-03	k: 958	n:140000
OBSCN   140000 perm   80 sec   (1741 perm/sec)   p_kst 6.842857e-03   p_cons 3.858143e-01   p_joint 1.738571e-02

Joint ci ratio: 8.155965e-02	ci left: 1.454770e-02	ci right 1.579114e-02	k: 2274	n:150000
Cons ci ratio: 1.277088e-02	ci left: 3.833222e-01	ci right 3.882556e-01	k: 57868	n:150000
KS ci ratio: 1.223819e-01	ci left: 6.377408e-03	ci right 7.215161e-03	k: 1018	n:150000
OBSCN   150000 perm   87 sec   (1733 perm/sec)   p_kst 6.786667e-03   p_cons 3.857867e-01   p_joint 1.516000e-02

Joint ci ratio: 7.332320e-02	ci left: 1.690609e-02	ci right 1.819898e-02	k: 2807	n:160000
Cons ci ratio: 1.236876e-02	ci left: 3.832702e-01	ci right 3.880465e-01	k: 61705	n:160000
KS ci ratio: 1.187123e-01	ci left: 6.366757e-03	ci right 7.176271e-03	k: 1082	n:160000
OBSCN   160000 perm   93 sec   (1724 perm/sec)   p_kst 6.762500e-03   p_cons 3.856562e-01   p_joint 1.754375e-02

Joint ci ratio: 7.014143e-02	ci left: 1.740798e-02	ci right 1.867912e-02	k: 3066	n:170000
Cons ci ratio: 1.200701e-02	ci left: 3.830444e-01	ci right 3.876772e-01	k: 65511	n:170000
KS ci ratio: 1.154048e-01	ci left: 6.351976e-03	ci right 7.135576e-03	k: 1145	n:170000
OBSCN   170000 perm   99 sec   (1714 perm/sec)   p_kst 6.735294e-03   p_cons 3.853588e-01   p_joint 1.803529e-02

Joint ci ratio: 5.806566e-02	ci left: 2.397691e-02	ci right 2.541623e-02	k: 4444	n:180000
Cons ci ratio: 1.167058e-02	ci left: 3.830342e-01	ci right 3.875362e-01	k: 69351	n:180000
KS ci ratio: 1.121724e-01	ci left: 6.360719e-03	ci right 7.121965e-03	k: 1212	n:180000
OBSCN   180000 perm   106 sec   (1702 perm/sec)   p_kst 6.733333e-03   p_cons 3.852833e-01   p_joint 2.468889e-02

Joint ci ratio: 6.450155e-02	ci left: 1.845299e-02	ci right 1.968806e-02	k: 3622	n:190000
Cons ci ratio: 1.135538e-02	ci left: 3.832581e-01	ci right 3.876402e-01	k: 73235	n:190000
KS ci ratio: 1.088980e-01	ci left: 6.404659e-03	ci right 7.147352e-03	k: 1286	n:190000
OBSCN   190000 perm   112 sec   (1692 perm/sec)   p_kst 6.768421e-03   p_cons 3.854474e-01   p_joint 1.906316e-02

Joint ci ratio: 5.646005e-02	ci left: 2.287010e-02	ci right 2.420376e-02	k: 4706	n:200000
Cons ci ratio: 1.107049e-02	ci left: 3.832013e-01	ci right 3.874721e-01	k: 77067	n:200000
KS ci ratio: 1.074966e-01	ci left: 6.249798e-03	ci right 6.964616e-03	k: 1320	n:200000
OBSCN   200000 perm   119 sec   (1683 perm/sec)   p_kst 6.600000e-03   p_cons 3.853350e-01   p_joint 2.353000e-02

Joint ci ratio: 5.717966e-02	ci left: 2.126417e-02	ci right 2.252050e-02	k: 4596	n:210000
Cons ci ratio: 1.080667e-02	ci left: 3.831226e-01	ci right 3.872901e-01	k: 80893	n:210000
KS ci ratio: 1.049459e-01	ci left: 6.253490e-03	ci right 6.950711e-03	k: 1385	n:210000
OBSCN   210000 perm   126 sec   (1672 perm/sec)   p_kst 6.595238e-03   p_cons 3.852048e-01   p_joint 2.188571e-02

Joint ci ratio: 6.198510e-02	ci left: 1.730081e-02	ci right 1.841195e-02	k: 3927	n:220000
Cons ci ratio: 1.055609e-02	ci left: 3.832656e-01	ci right 3.873374e-01	k: 84766	n:220000
KS ci ratio: 1.023912e-01	ci left: 6.279176e-03	ci right 6.961193e-03	k: 1455	n:220000
OBSCN   220000 perm   132 sec   (1666 perm/sec)   p_kst 6.613636e-03   p_cons 3.853000e-01   p_joint 1.785000e-02

Joint ci ratio: 6.169080e-02	ci left: 1.671967e-02	ci right 1.778820e-02	k: 3967	n:230000
Cons ci ratio: 1.032453e-02	ci left: 3.832887e-01	ci right 3.872708e-01	k: 88614	n:230000
KS ci ratio: 1.004794e-01	ci left: 6.243464e-03	ci right 6.908193e-03	k: 1511	n:230000
OBSCN   230000 perm   139 sec   (1657 perm/sec)   p_kst 6.569565e-03   p_cons 3.852783e-01   p_joint 1.724783e-02

Joint ci ratio: 6.083839e-02	ci left: 1.648657e-02	ci right 1.752514e-02	k: 4080	n:240000
Cons ci ratio: 1.010660e-02	ci left: 3.833564e-01	ci right 3.872547e-01	k: 92473	n:240000
KS ci ratio: 9.816794e-02	ci left: 6.275873e-03	ci right 6.927796e-03	k: 1583	n:240000
OBSCN   240000 perm   145 sec   (1651 perm/sec)   p_kst 6.595833e-03   p_cons 3.853042e-01   p_joint 1.700000e-02

Outputting figure to mutsig2_images.part000000000119/OBSCN.4_25533_240000_0.0065958_0.3853_0.017.png
                gene_name: OBSCN
               theta_stop: 0.098 
                    nperm: 240000 
                     p_ks: 0.0066 
        ci_ks_bounds_left: 0.0063 
       ci_ks_bounds_right: 0.0069 
                   p_cons: 0.39 
      ci_cons_bounds_left: 0.38 
     ci_cons_bounds_right: 0.39 
                  p_joint: 0.017 
     ci_joint_bounds_left: 0.016 
    ci_joint_bounds_right: 0.018 

Current progress: 25 percent done.
OCRL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.905540e-02	ci left: 2.352124e-01	ci right 2.521372e-01	k: 2436	n:10000
Cons ci ratio: 1.487901e-01	ci left: 6.005239e-02	ci right 6.980294e-02	k: 648	n:10000
KS ci ratio: 3.751414e-01	ci left: 8.776964e-03	ci right 1.291541e-02	k: 107	n:10000
OCRL   10000 perm   2 sec   (6039 perm/sec)   p_kst 1.070000e-02   p_cons 6.480000e-02   p_joint 2.436000e-01

Joint ci ratio: 1.545824e-01	ci left: 2.873760e-02	ci right 3.359997e-02	k: 622	n:20000
Cons ci ratio: 1.160707e-01	ci left: 5.081038e-02	ci right 5.712009e-02	k: 1078	n:20000
KS ci ratio: 2.723712e-01	ci left: 8.854025e-03	ci right 1.169107e-02	k: 204	n:20000
OCRL   20000 perm   4 sec   (5407 perm/sec)   p_kst 1.020000e-02   p_cons 5.390000e-02   p_joint 3.110000e-02

Joint ci ratio: 1.357744e-01	ci left: 2.519514e-02	ci right 2.889722e-02	k: 810	n:30000
Cons ci ratio: 9.454075e-02	ci left: 5.163197e-02	ci right 5.678813e-02	k: 1625	n:30000
KS ci ratio: 2.294711e-01	ci left: 8.527638e-03	ci right 1.076886e-02	k: 288	n:30000
OCRL   30000 perm   6 sec   (4976 perm/sec)   p_kst 9.600000e-03   p_cons 5.416667e-02   p_joint 2.700000e-02

Joint ci ratio: 1.017906e-01	ci left: 3.392739e-02	ci right 3.759041e-02	k: 1429	n:40000
Cons ci ratio: 8.235808e-02	ci left: 5.138828e-02	ci right 5.582681e-02	k: 2143	n:40000
KS ci ratio: 1.957580e-01	ci left: 8.952977e-03	ci right 1.091915e-02	k: 396	n:40000
OCRL   40000 perm   8 sec   (4849 perm/sec)   p_kst 9.900000e-03   p_cons 5.357500e-02   p_joint 3.572500e-02

Joint ci ratio: 9.422019e-02	ci left: 3.188130e-02	ci right 3.505317e-02	k: 1672	n:50000
Cons ci ratio: 7.361994e-02	ci left: 5.168110e-02	ci right 5.565092e-02	k: 2682	n:50000
KS ci ratio: 1.740760e-01	ci left: 9.165546e-03	ci right 1.093203e-02	k: 501	n:50000
OCRL   50000 perm   11 sec   (4742 perm/sec)   p_kst 1.002000e-02   p_cons 5.364000e-02   p_joint 3.344000e-02

Joint ci ratio: 8.519339e-02	ci left: 3.262943e-02	ci right 3.554920e-02	k: 2044	n:60000
Cons ci ratio: 6.722326e-02	ci left: 5.182754e-02	ci right 5.544912e-02	k: 3217	n:60000
KS ci ratio: 1.571272e-01	ci left: 9.459494e-03	ci right 1.108840e-02	k: 615	n:60000
OCRL   60000 perm   13 sec   (4647 perm/sec)   p_kst 1.025000e-02   p_cons 5.361667e-02   p_joint 3.406667e-02

Joint ci ratio: 8.736358e-02	ci left: 2.673441e-02	ci right 2.919064e-02	k: 1956	n:70000
Cons ci ratio: 6.236260e-02	ci left: 5.175994e-02	ci right 5.510577e-02	k: 3739	n:70000
KS ci ratio: 1.457451e-01	ci left: 9.482641e-03	ci right 1.098694e-02	k: 715	n:70000
OCRL   70000 perm   15 sec   (4555 perm/sec)   p_kst 1.021429e-02   p_cons 5.341429e-02   p_joint 2.794286e-02

Joint ci ratio: 7.381716e-02	ci left: 3.279167e-02	ci right 3.531727e-02	k: 2723	n:80000
Cons ci ratio: 5.856897e-02	ci left: 5.146986e-02	ci right 5.458765e-02	k: 4241	n:80000
KS ci ratio: 1.372919e-01	ci left: 9.394529e-03	ci right 1.079134e-02	k: 806	n:80000
OCRL   80000 perm   18 sec   (4475 perm/sec)   p_kst 1.007500e-02   p_cons 5.301250e-02   p_joint 3.403750e-02

Joint ci ratio: 6.971927e-02	ci left: 3.274901e-02	ci right 3.512560e-02	k: 3053	n:90000
Cons ci ratio: 5.521481e-02	ci left: 5.156714e-02	ci right 5.450619e-02	k: 4772	n:90000
KS ci ratio: 1.296477e-01	ci left: 9.403243e-03	ci right 1.071751e-02	k: 904	n:90000
OCRL   90000 perm   20 sec   (4395 perm/sec)   p_kst 1.004444e-02   p_cons 5.302222e-02   p_joint 3.392222e-02

Joint ci ratio: 6.160777e-02	ci left: 3.770997e-02	ci right 4.011686e-02	k: 3890	n:100000
Cons ci ratio: 5.242490e-02	ci left: 5.156018e-02	ci right 5.434583e-02	k: 5294	n:100000
KS ci ratio: 1.231529e-01	ci left: 9.411945e-03	ci right 1.065672e-02	k: 1002	n:100000
OCRL   100000 perm   23 sec   (4322 perm/sec)   p_kst 1.002000e-02   p_cons 5.294000e-02   p_joint 3.890000e-02

Joint ci ratio: 4.866906e-02	ci left: 5.433391e-02	ci right 5.705321e-02	k: 6125	n:110000
Cons ci ratio: 5.015134e-02	ci left: 5.129704e-02	ci right 5.394479e-02	k: 5787	n:110000
KS ci ratio: 1.172768e-01	ci left: 9.464544e-03	ci right 1.065241e-02	k: 1105	n:110000
OCRL   110000 perm   26 sec   (4252 perm/sec)   p_kst 1.004545e-02   p_cons 5.260909e-02   p_joint 5.568182e-02

Joint ci ratio: 4.655988e-02	ci left: 5.447492e-02	ci right 5.707993e-02	k: 6692	n:120000
Cons ci ratio: 4.802905e-02	ci left: 5.132714e-02	ci right 5.386120e-02	k: 6310	n:120000
KS ci ratio: 1.117958e-01	ci left: 9.574370e-03	ci right 1.071616e-02	k: 1216	n:120000
OCRL   120000 perm   29 sec   (4186 perm/sec)   p_kst 1.013333e-02   p_cons 5.258333e-02   p_joint 5.576667e-02

Joint ci ratio: 5.471995e-02	ci left: 3.693677e-02	ci right 3.902237e-02	k: 4936	n:130000
Cons ci ratio: 4.617305e-02	ci left: 5.131657e-02	ci right 5.374959e-02	k: 6828	n:130000
KS ci ratio: 1.071809e-01	ci left: 9.638438e-03	ci right 1.073742e-02	k: 1323	n:130000
OCRL   130000 perm   32 sec   (4119 perm/sec)   p_kst 1.017692e-02   p_cons 5.252308e-02   p_joint 3.796923e-02

Joint ci ratio: 5.188211e-02	ci left: 3.816118e-02	ci right 4.020082e-02	k: 5484	n:140000
Cons ci ratio: 4.450085e-02	ci left: 5.134448e-02	ci right 5.368839e-02	k: 7351	n:140000
KS ci ratio: 1.035704e-01	ci left: 9.603703e-03	ci right 1.065959e-02	k: 1417	n:140000
OCRL   140000 perm   34 sec   (4059 perm/sec)   p_kst 1.012143e-02   p_cons 5.250714e-02   p_joint 3.917143e-02

Joint ci ratio: 5.011751e-02	ci left: 3.820371e-02	ci right 4.017415e-02	k: 5877	n:150000
Cons ci ratio: 4.296067e-02	ci left: 5.145583e-02	ci right 5.372150e-02	k: 7887	n:150000
KS ci ratio: 1.003689e-01	ci left: 9.561137e-03	ci right 1.057793e-02	k: 1509	n:150000
OCRL   150000 perm   38 sec   (3997 perm/sec)   p_kst 1.006000e-02   p_cons 5.258000e-02   p_joint 3.918000e-02

Joint ci ratio: 4.832535e-02	ci left: 3.854464e-02	ci right 4.045959e-02	k: 6319	n:160000
Cons ci ratio: 4.159094e-02	ci left: 5.150498e-02	ci right 5.369877e-02	k: 8415	n:160000
KS ci ratio: 9.726315e-02	ci left: 9.560929e-03	ci right 1.054445e-02	k: 1607	n:160000
OCRL   160000 perm   41 sec   (3938 perm/sec)   p_kst 1.004375e-02   p_cons 5.259375e-02   p_joint 3.949375e-02

Outputting figure to mutsig2_images.part000000000119/OCRL.2_2802_160000_0.010044_0.052594_0.039494.png
                gene_name: OCRL
               theta_stop: 0.097 
                    nperm: 160000 
                     p_ks: 0.010 
        ci_ks_bounds_left: 0.0096 
       ci_ks_bounds_right: 0.011 
                   p_cons: 0.053 
      ci_cons_bounds_left: 0.052 
     ci_cons_bounds_right: 0.054 
                  p_joint: 0.039 
     ci_joint_bounds_left: 0.039 
    ci_joint_bounds_right: 0.040 

Current progress: 50 percent done.
ODZ4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.268807e-02	ci left: 2.170439e-01	ci right 2.335164e-01	k: 2252	n:10000
Cons ci ratio: 2.134564e-02	ci left: 7.629399e-01	ci right 7.795018e-01	k: 7713	n:10000
KS ci ratio: 2.187888e-01	ci left: 2.769020e-02	ci right 3.458650e-02	k: 310	n:10000
ODZ4   10000 perm   2 sec   (4307 perm/sec)   p_kst 3.100000e-02   p_cons 7.713000e-01   p_joint 2.252000e-01

Joint ci ratio: 7.170532e-02	ci left: 1.253190e-01	ci right 1.346889e-01	k: 2599	n:20000
Cons ci ratio: 1.508078e-02	ci left: 7.657177e-01	ci right 7.774032e-01	k: 15432	n:20000
KS ci ratio: 1.580186e-01	ci left: 2.748703e-02	ci right 3.225095e-02	k: 596	n:20000
ODZ4   20000 perm   5 sec   (3943 perm/sec)   p_kst 2.980000e-02   p_cons 7.716000e-01   p_joint 1.299500e-01

Joint ci ratio: 5.840986e-02	ci left: 1.267075e-01	ci right 1.343642e-01	k: 3915	n:30000
Cons ci ratio: 1.230059e-02	ci left: 7.671761e-01	ci right 7.767046e-01	k: 23159	n:30000
KS ci ratio: 1.269551e-01	ci left: 2.884147e-02	ci right 3.278342e-02	k: 923	n:30000
ODZ4   30000 perm   8 sec   (3801 perm/sec)   p_kst 3.076667e-02   p_cons 7.719667e-01   p_joint 1.305000e-01

Joint ci ratio: 5.785582e-02	ci left: 9.996362e-02	ci right 1.059442e-01	k: 4117	n:40000
Cons ci ratio: 1.119004e-02	ci left: 7.499246e-01	ci right 7.583885e-01	k: 30167	n:40000
KS ci ratio: 1.098548e-01	ci left: 2.915279e-02	ci right 3.256576e-02	k: 1233	n:40000
ODZ4   40000 perm   11 sec   (3707 perm/sec)   p_kst 3.082500e-02   p_cons 7.541750e-01   p_joint 1.029250e-01

Joint ci ratio: 5.126355e-02	ci left: 1.020096e-01	ci right 1.073964e-01	k: 5234	n:50000
Cons ci ratio: 9.995052e-03	ci left: 7.508838e-01	ci right 7.584466e-01	k: 37734	n:50000
KS ci ratio: 9.784898e-02	ci left: 2.957621e-02	ci right 3.263855e-02	k: 1554	n:50000
ODZ4   50000 perm   14 sec   (3643 perm/sec)   p_kst 3.108000e-02   p_cons 7.546800e-01   p_joint 1.046800e-01

Outputting figure to mutsig2_images.part000000000119/ODZ4.2_8430_50000_0.03108_0.75468_0.10468.png
                gene_name: ODZ4
               theta_stop: 0.098 
                    nperm: 50000 
                     p_ks: 0.031 
        ci_ks_bounds_left: 0.030 
       ci_ks_bounds_right: 0.033 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.75 
     ci_cons_bounds_right: 0.76 
                  p_joint: 0.10 
     ci_joint_bounds_left: 0.10 
    ci_joint_bounds_right: 0.11 

Current progress: 75 percent done.
OGDHL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.458394e-02	ci left: 7.087653e-01	ci right 7.265077e-01	k: 7177	n:10000
Cons ci ratio: 3.110410e-02	ci left: 6.039745e-01	ci right 6.231593e-01	k: 6136	n:10000
KS ci ratio: 6.117213e-02	ci left: 2.821093e-01	ci right 3.000126e-01	k: 2910	n:10000
OGDHL   10000 perm   2 sec   (6065 perm/sec)   p_kst 2.910000e-01   p_cons 6.136000e-01   p_joint 7.177000e-01

Outputting figure to mutsig2_images.part000000000119/OGDHL.2_3121_10000_0.291_0.6136_0.7177.png
                gene_name: OGDHL
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 0.72 
     ci_joint_bounds_left: 0.71 
    ci_joint_bounds_right: 0.73 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000119
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 119 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1535>
Subject: Job 8704291: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1535>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000120> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:38:18 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000120.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000120.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 120  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000120.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    244.06 sec.
    Max Memory :      5449 MB
    Max Swap   :      8361 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
120
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 120
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 120: processing genes 10766 - 10856
Calculating significance of each gene.
Using projection method.
10766	OPN1MW2	1
10767	OPN1SW	1
10768	OPN3	1
10769	OPN4	3.719619e-02
10770	OPN5	1
10771	OPRD1	1
10772	OPRK1	1
10773	OPRL1	1
10774	OPRM1	1
10775	OPTC	1
10776	OPTN	1
10777	OR10A2	3.821520e-02
10778	OR10A3	1
10779	OR10A4	1
10780	OR10A5	1
10781	OR10A6	1
10782	OR10A7	1
10783	OR10AD1	1
10784	OR10AG1	5.591281e-02
10785	OR10C1	1
10786	OR10G2	9.247033e-02
10787	OR10G3	1
10788	OR10G4	3.918077e-02
10789	OR10G7	1
10790	OR10G8	1
10791	OR10G9	1
10792	OR10H1	1
10793	OR10H2	1
10794	OR10H3	1
10795	OR10H4	1
10796	OR10H5	1
10797	OR10J1	1
10798	OR10J3	1
10799	OR10J5	1
10800	OR10K1	9.550053e-02
10801	OR10K2	1.084699e-02
10802	OR10P1	1
10803	OR10Q1	1
10804	OR10R2	1
10805	OR10S1	1
10806	OR10T2	1
10807	OR10V1	1
10808	OR10W1	1
10809	OR10X1	1
10810	OR10Z1	1
10811	OR11A1	1
10812	OR11G2	1.196457e-01
10813	OR11H1	1
10814	OR11H12	1.190722e-01
10815	OR11H4	1
10816	OR11H6	1
10817	OR11L1	1
10818	OR12D2	1
10819	OR12D3	1
10820	OR13A1	1
10821	OR13C2	1
10822	OR13C3	1
10823	OR13C4	1
10824	OR13C5	1
10825	OR13C8	1
10826	OR13C9	1
10827	OR13D1	1
10828	OR13F1	2.193308e-04
10829	OR13G1	1
10830	OR13H1	1
10831	OR13J1	1
10832	OR14A16	1
10833	OR14C36	1
10834	OR14I1	1
10835	OR14J1	1
10836	OR1A1	1
10837	OR1A2	1
10838	OR1B1	1
10839	OR1C1	1
10840	OR1D2	1
10841	OR1E1	1
10842	OR1E2	1
10843	OR1F1	1
10844	OR1G1	1
10845	OR1I1	1
10846	OR1J1	1
10847	OR1J2	1.052946e-01
10848	OR1J4	1
10849	OR1K1	1
10850	OR1L1	1
10851	OR1L3	1
10852	OR1L4	1
10853	OR1L6	1
10854	OR1L8	1
10855	OR1M1	1
10856	OR1N1	1
Done

Running MutSig 2:
Scatter job 120: processing genes 10766 - 10856
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
OR13F1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.395665e-02	ci left: 4.331321e-01	ci right 4.527012e-01	k: 4429	n:10000
Cons ci ratio: 4.025071e-02	ci left: 4.768587e-01	ci right 4.965490e-01	k: 4867	n:10000
KS ci ratio: 5.195093e-02	ci left: 3.532680e-01	ci right 3.722120e-01	k: 3627	n:10000
OR13F1   10000 perm   2 sec   (5938 perm/sec)   p_kst 3.627000e-01   p_cons 4.867000e-01   p_joint 4.429000e-01

Outputting figure to mutsig2_images.part000000000120/OR13F1.3_962_10000_0.3627_0.4867_0.4429.png
                gene_name: OR13F1
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.36 
        ci_ks_bounds_left: 0.35 
       ci_ks_bounds_right: 0.37 
                   p_cons: 0.49 
      ci_cons_bounds_left: 0.48 
     ci_cons_bounds_right: 0.50 
                  p_joint: 0.44 
     ci_joint_bounds_left: 0.43 
    ci_joint_bounds_right: 0.45 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000120
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 120 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1699>
Subject: Job 8704292: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1699>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000121> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:37:44 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000121.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000121.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 121  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000121.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    169.44 sec.
    Max Memory :      5707 MB
    Max Swap   :      8454 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
121
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 121
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 121: processing genes 10857 - 10946
Calculating significance of each gene.
Using projection method.
10857	OR1N2	1.106507e-02
10858	OR1Q1	1
10859	OR1S1	1
10860	OR1S2	1
10861	OR2A1	1
10862	OR2A12	1
10863	OR2A14	1
10864	OR2A2	1
10865	OR2A25	1
10866	OR2A4	1
10867	OR2A42	1
10868	OR2A5	1
10869	OR2A7	1
10870	OR2AE1	1
10871	OR2AG1	1
10872	OR2AG2	1
10873	OR2AK2	1
10874	OR2AT4	1
10875	OR2B11	1
10876	OR2B2	1
10877	OR2B3	1
10878	OR2B6	1
10879	OR2C1	1.243258e-01
10880	OR2C3	1
10881	OR2D2	1
10882	OR2D3	1
10883	OR2F1	1
10884	OR2F2	1
10885	OR2G2	1
10886	OR2G3	1
10887	OR2G6	7.007402e-02
10888	OR2H1	2.906510e-02
10889	OR2H2	3.826463e-02
10890	OR2J2	6.248560e-02
10891	OR2J3	1
10892	OR2K2	1
10893	OR2L13	1
10894	OR2L2	1
10895	OR2L3	1.094188e-02
10896	OR2L8	1
10897	OR2M2	1.007866e-01
10898	OR2M3	2.979011e-04
10899	OR2M4	1
10900	OR2M5	1.068462e-01
10901	OR2M7	1
10902	OR2S2	1
10903	OR2T1	1
10904	OR2T10	1
10905	OR2T11	1
10906	OR2T12	1
10907	OR2T2	1
10908	OR2T27	1
10909	OR2T3	1
10910	OR2T33	1.083112e-01
10911	OR2T34	1
10912	OR2T35	1
10913	OR2T4	1.116112e-01
10914	OR2T5	1
10915	OR2T6	1
10916	OR2T8	1
10917	OR2V2	1
10918	OR2W1	1
10919	OR2W3	1
10920	OR2W5	1
10921	OR2Y1	1
10922	OR2Z1	1
10923	OR3A1	1
10924	OR3A2	1
10925	OR3A3	3.480932e-03
10926	OR4A15	1
10927	OR4A16	1
10928	OR4A47	1
10929	OR4A5	5.364962e-02
10930	OR4B1	1
10931	OR4C11	1.182901e-01
10932	OR4C12	1
10933	OR4C13	1
10934	OR4C15	1
10935	OR4C16	1
10936	OR4C3	5.432541e-02
10937	OR4C46	1
10938	OR4C6	3.040505e-03
10939	OR4D1	1
10940	OR4D10	1
10941	OR4D11	1
10942	OR4D2	1
In gene OR4D5 the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 5	N = 961     n = 1	mu =   1.70e-07
10943	OR4D5	8.364445e-02
10944	OR4D6	1
10945	OR4D9	8.040888e-02
10946	OR4E2	1
Done

Running MutSig 2:
Scatter job 121: processing genes 10857 - 10946
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
OR2M3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.852906e-02	ci left: 6.442810e-01	ci right 6.630294e-01	k: 6537	n:10000
Cons ci ratio: 5.213117e-02	ci left: 3.516775e-01	ci right 3.706035e-01	k: 3611	n:10000
KS ci ratio: 2.989034e-02	ci left: 6.227620e-01	ci right 6.417609e-01	k: 6323	n:10000
OR2M3   10000 perm   2 sec   (6288 perm/sec)   p_kst 6.323000e-01   p_cons 3.611000e-01   p_joint 6.537000e-01

Outputting figure to mutsig2_images.part000000000121/OR2M3.3_942_10000_0.6323_0.3611_0.6537.png
                gene_name: OR2M3
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.63 
        ci_ks_bounds_left: 0.62 
       ci_ks_bounds_right: 0.64 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.65 
     ci_joint_bounds_left: 0.64 
    ci_joint_bounds_right: 0.66 

Current progress: 25 percent done.
OR1N2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.102486e-02	ci left: 7.683064e-01	ci right 7.847323e-01	k: 7766	n:10000
KS ci ratio: 2.700660e-02	ci left: 6.688421e-01	ci right 6.872541e-01	k: 6781	n:10000
OR1N2   10000 perm   1 sec   (6893 perm/sec)   p_kst 6.781000e-01   p_cons 7.766000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000121/OR1N2.2_996_10000_0.6781_0.7766_1.png
                gene_name: OR1N2
               theta_stop: 0.027 
                    nperm: 10000 
                     p_ks: 0.68 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.69 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.78 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
OR3A3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.404356e-02	ci left: 8.799154e-01	ci right 8.924587e-01	k: 8863	n:10000
Cons ci ratio: 2.073996e-02	ci left: 7.730669e-01	ci right 7.893690e-01	k: 7813	n:10000
KS ci ratio: 4.235415e-02	ci left: 4.514920e-01	ci right 4.711305e-01	k: 4613	n:10000
OR3A3   10000 perm   2 sec   (6449 perm/sec)   p_kst 4.613000e-01   p_cons 7.813000e-01   p_joint 8.863000e-01

Outputting figure to mutsig2_images.part000000000121/OR3A3.2_969_10000_0.4613_0.7813_0.8863.png
                gene_name: OR3A3
               theta_stop: 0.042 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.79 
                  p_joint: 0.89 
     ci_joint_bounds_left: 0.88 
    ci_joint_bounds_right: 0.89 

Current progress: 75 percent done.
OR4C6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.593140e-02	ci left: 3.200898e-01	ci right 3.386097e-01	k: 3293	n:10000
Cons ci ratio: 8.882633e-02	ci left: 1.557113e-01	ci right 1.702856e-01	k: 1629	n:10000
KS ci ratio: 3.155843e-02	ci left: 5.970460e-01	ci right 6.162918e-01	k: 6067	n:10000
OR4C6   10000 perm   1 sec   (6744 perm/sec)   p_kst 6.067000e-01   p_cons 1.629000e-01   p_joint 3.293000e-01

Outputting figure to mutsig2_images.part000000000121/OR4C6.2_932_10000_0.6067_0.1629_0.3293.png
                gene_name: OR4C6
               theta_stop: 0.089 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.33 
     ci_joint_bounds_left: 0.32 
    ci_joint_bounds_right: 0.34 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000121
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 121 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1650>
Subject: Job 8704294: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1650>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000122> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:40:13 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000122.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000122.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 122  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000122.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    313.31 sec.
    Max Memory :      5911 MB
    Max Swap   :      8340 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
122
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 122
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 122: processing genes 10947 - 11037
Calculating significance of each gene.
Using projection method.
10947	OR4F15	1
10948	OR4F17	1
10949	OR4F21	1
10950	OR4F4	1
10951	OR4F5	1
10952	OR4F6	1
10953	OR4K1	1
10954	OR4K13	1
10955	OR4K14	1
10956	OR4K15	1
10957	OR4K17	1
10958	OR4K2	7.782221e-02
10959	OR4K5	7.894173e-02
10960	OR4L1	4.955362e-02
10961	OR4M1	5.540934e-02
10962	OR4M2	1
10963	OR4N2	1
10964	OR4N4	5.798435e-03
10965	OR4N5	8.106337e-03
10966	OR4P4	1
10967	OR4Q3	1
10968	OR4S1	1
10969	OR4S2	1
10970	OR4X1	1.452794e-03
10971	OR4X2	1
10972	OR51A2	1
10973	OR51A4	1
10974	OR51A7	1
10975	OR51B2	1
10976	OR51B4	1
10977	OR51B5	1
10978	OR51B6	1
10979	OR51D1	1
10980	OR51E1	1
10981	OR51E2	1
10982	OR51F1	1.163371e-01
10983	OR51F2	1
10984	OR51G1	1.756133e-02
10985	OR51G2	1
10986	OR51I1	1
10987	OR51I2	1
10988	OR51L1	1
10989	OR51M1	1.044213e-01
10990	OR51Q1	1
10991	OR51S1	1
10992	OR51T1	1
10993	OR51V1	1.378005e-01
10994	OR52A1	1
10995	OR52A4	1
10996	OR52A5	1
10997	OR52B2	1
10998	OR52B4	1
10999	OR52B6	1
11000/18093 11000	OR52D1	1
11001	OR52E2	1
11002	OR52E4	1
11003	OR52E6	2.021600e-02
11004	OR52E8	1
11005	OR52H1	1
11006	OR52I1	1
11007	OR52I2	1
11008	OR52J3	1
11009	OR52K1	1
11010	OR52K2	1
11011	OR52L1	1
11012	OR52M1	1
11013	OR52N1	1
11014	OR52N2	9.573790e-02
11015	OR52N4	2.746308e-02
11016	OR52N5	1
11017	OR52R1	1
11018	OR52W1	1
11019	OR56A1	2.976826e-03
11020	OR56A3	1
11021	OR56A4	1
11022	OR56A5	5.889793e-03
11023	OR56B1	1
11024	OR56B4	1.103420e-01
11025	OR5A1	1
11026	OR5A2	1
11027	OR5AC2	1
11028	OR5AK2	2.271349e-02
11029	OR5AN1	1
11030	OR5AP2	1
11031	OR5AR1	1.291173e-01
11032	OR5AS1	1.198262e-01
11033	OR5AU1	1.034652e-01
11034	OR5B12	1
11035	OR5B17	1
11036	OR5B2	9.784567e-02
11037	OR5B21	1
Done

Running MutSig 2:
Scatter job 122: processing genes 10947 - 11037
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
OR4N4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.420760e-02	ci left: 1.705475e-01	ci right 1.856405e-01	k: 1780	n:10000
Cons ci ratio: 9.412510e-02	ci left: 1.407993e-01	ci right 1.548065e-01	k: 1477	n:10000
KS ci ratio: 1.907267e-02	ci left: 8.007500e-01	ci right 8.162698e-01	k: 8086	n:10000
OR4N4   10000 perm   3 sec   (3545 perm/sec)   p_kst 8.086000e-01   p_cons 1.477000e-01   p_joint 1.780000e-01

Outputting figure to mutsig2_images.part000000000122/OR4N4.2_954_10000_0.8086_0.1477_0.178.png
                gene_name: OR4N4
               theta_stop: 0.094 
                    nperm: 10000 
                     p_ks: 0.81 
        ci_ks_bounds_left: 0.80 
       ci_ks_bounds_right: 0.82 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.15 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.17 
    ci_joint_bounds_right: 0.19 

Current progress: 25 percent done.
OR4N5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.494067e-02	ci left: 8.665194e-01	ci right 8.796624e-01	k: 8732	n:10000
Cons ci ratio: 1.496762e-02	ci left: 8.661108e-01	ci right 8.792713e-01	k: 8728	n:10000
KS ci ratio: 7.543835e-02	ci left: 2.045169e-01	ci right 2.206509e-01	k: 2125	n:10000
OR4N5   10000 perm   2 sec   (5644 perm/sec)   p_kst 2.125000e-01   p_cons 8.728000e-01   p_joint 8.732000e-01

Outputting figure to mutsig2_images.part000000000122/OR4N5.2_930_10000_0.2125_0.8728_0.8732.png
                gene_name: OR4N5
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.21 
        ci_ks_bounds_left: 0.20 
       ci_ks_bounds_right: 0.22 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.88 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.87 
    ci_joint_bounds_right: 0.88 

Current progress: 50 percent done.
OR4X1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.327350e-03	ci left: 9.527344e-01	ci right 9.607967e-01	k: 9569	n:10000
Cons ci ratio: 3.354587e-02	ci left: 5.674464e-01	ci right 5.869086e-01	k: 5772	n:10000
KS ci ratio: 1.532262e-02	ci left: 8.606980e-01	ci right 8.740872e-01	k: 8675	n:10000
OR4X1   10000 perm   1 sec   (6721 perm/sec)   p_kst 8.675000e-01   p_cons 5.772000e-01   p_joint 9.569000e-01

Outputting figure to mutsig2_images.part000000000122/OR4X1.2_921_10000_0.8675_0.5772_0.9569.png
                gene_name: OR4X1
               theta_stop: 0.034 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.86 
       ci_ks_bounds_right: 0.87 
                   p_cons: 0.58 
      ci_cons_bounds_left: 0.57 
     ci_cons_bounds_right: 0.59 
                  p_joint: 0.96 
     ci_joint_bounds_left: 0.95 
    ci_joint_bounds_right: 0.96 

Current progress: 75 percent done.
OR56A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.284655e-01	ci left: 6.526864e-03	ci right 1.016828e-02	k: 82	n:10000
Cons ci ratio: 6.614075e-01	ci left: 2.355713e-03	ci right 4.747948e-03	k: 34	n:10000
KS ci ratio: 9.553251e-02	ci left: 1.371732e-01	ci right 1.510349e-01	k: 1440	n:10000
OR56A1   10000 perm   1 sec   (6675 perm/sec)   p_kst 1.440000e-01   p_cons 3.400000e-03   p_joint 8.200000e-03

Joint ci ratio: 4.429753e-01	ci left: 3.039518e-03	ci right 4.809524e-03	k: 77	n:20000
Cons ci ratio: 4.745492e-01	ci left: 2.597119e-03	ci right 4.252457e-03	k: 67	n:20000
KS ci ratio: 6.738898e-02	ci left: 1.398020e-01	ci right 1.496015e-01	k: 2893	n:20000
OR56A1   20000 perm   3 sec   (5908 perm/sec)   p_kst 1.446500e-01   p_cons 3.350000e-03   p_joint 3.850000e-03

Joint ci ratio: 2.963065e-01	ci left: 4.941315e-03	ci right 6.689812e-03	k: 173	n:30000
Cons ci ratio: 3.837144e-01	ci left: 2.803236e-03	ci right 4.162393e-03	k: 103	n:30000
KS ci ratio: 5.526902e-02	ci left: 1.396167e-01	ci right 1.475857e-01	k: 4307	n:30000
OR56A1   30000 perm   5 sec   (5514 perm/sec)   p_kst 1.435667e-01   p_cons 3.433333e-03   p_joint 5.766667e-03

Joint ci ratio: 2.491573e-01	ci left: 5.383925e-03	ci right 6.939080e-03	k: 245	n:40000
Cons ci ratio: 3.319077e-01	ci left: 2.899187e-03	ci right 4.074717e-03	k: 138	n:40000
KS ci ratio: 4.782562e-02	ci left: 1.403501e-01	ci right 1.472517e-01	k: 5751	n:40000
OR56A1   40000 perm   8 sec   (5328 perm/sec)   p_kst 1.437750e-01   p_cons 3.450000e-03   p_joint 6.125000e-03

Joint ci ratio: 2.073101e-01	ci left: 6.363818e-03	ci right 7.854269e-03	k: 354	n:50000
Cons ci ratio: 2.868904e-01	ci left: 3.186808e-03	ci right 4.272065e-03	k: 185	n:50000
KS ci ratio: 4.280095e-02	ci left: 1.405766e-01	ci right 1.467449e-01	k: 7182	n:50000
OR56A1   50000 perm   10 sec   (4873 perm/sec)   p_kst 1.436400e-01   p_cons 3.700000e-03   p_joint 7.080000e-03

Joint ci ratio: 1.960856e-01	ci left: 5.967726e-03	ci right 7.280681e-03	k: 396	n:60000
Cons ci ratio: 2.591125e-01	ci left: 3.307901e-03	ci right 4.307705e-03	k: 227	n:60000
KS ci ratio: 3.912109e-02	ci left: 1.405385e-01	ci right 1.461627e-01	k: 8600	n:60000
OR56A1   60000 perm   14 sec   (4406 perm/sec)   p_kst 1.433333e-01   p_cons 3.783333e-03   p_joint 6.600000e-03

Joint ci ratio: 1.815731e-01	ci left: 6.013545e-03	ci right 7.227896e-03	k: 462	n:70000
Cons ci ratio: 2.394404e-01	ci left: 3.357740e-03	ci right 4.284138e-03	k: 266	n:70000
KS ci ratio: 3.609011e-02	ci left: 1.416195e-01	ci right 1.468386e-01	k: 10095	n:70000
OR56A1   70000 perm   17 sec   (4120 perm/sec)   p_kst 1.442143e-01   p_cons 3.800000e-03   p_joint 6.600000e-03

Joint ci ratio: 1.701935e-01	ci left: 6.026664e-03	ci right 7.159564e-03	k: 526	n:80000
Cons ci ratio: 2.240289e-01	ci left: 3.385478e-03	ci right 4.251118e-03	k: 304	n:80000
KS ci ratio: 3.365073e-02	ci left: 1.425792e-01	ci right 1.474716e-01	k: 11601	n:80000
OR56A1   80000 perm   20 sec   (4095 perm/sec)   p_kst 1.450125e-01   p_cons 3.800000e-03   p_joint 6.575000e-03

Joint ci ratio: 1.594981e-01	ci left: 6.134737e-03	ci right 7.208542e-03	k: 599	n:90000
Cons ci ratio: 2.106397e-01	ci left: 3.429593e-03	ci right 4.247343e-03	k: 344	n:90000
KS ci ratio: 3.173796e-02	ci left: 1.426283e-01	ci right 1.472391e-01	k: 13043	n:90000
OR56A1   90000 perm   22 sec   (4013 perm/sec)   p_kst 1.449222e-01   p_cons 3.822222e-03   p_joint 6.655556e-03

Joint ci ratio: 1.500347e-01	ci left: 6.271109e-03	ci right 7.297812e-03	k: 677	n:100000
Cons ci ratio: 1.988779e-01	ci left: 3.485123e-03	ci right 4.264088e-03	k: 386	n:100000
KS ci ratio: 3.010241e-02	ci left: 1.428031e-01	ci right 1.471775e-01	k: 14498	n:100000
OR56A1   100000 perm   25 sec   (4008 perm/sec)   p_kst 1.449800e-01   p_cons 3.860000e-03   p_joint 6.770000e-03

Joint ci ratio: 1.426487e-01	ci left: 6.331611e-03	ci right 7.312844e-03	k: 749	n:110000
Cons ci ratio: 1.893327e-01	ci left: 3.514271e-03	ci right 4.257717e-03	k: 426	n:110000
KS ci ratio: 2.867724e-02	ci left: 1.431139e-01	ci right 1.472867e-01	k: 15971	n:110000
OR56A1   110000 perm   28 sec   (3991 perm/sec)   p_kst 1.451909e-01   p_cons 3.872727e-03   p_joint 6.809091e-03

Joint ci ratio: 1.366752e-01	ci left: 6.342808e-03	ci right 7.281264e-03	k: 816	n:120000
Cons ci ratio: 1.810419e-01	ci left: 3.539305e-03	ci right 4.251666e-03	k: 466	n:120000
KS ci ratio: 2.744440e-02	ci left: 1.433105e-01	ci right 1.473066e-01	k: 17436	n:120000
OR56A1   120000 perm   30 sec   (3953 perm/sec)   p_kst 1.453000e-01   p_cons 3.883333e-03   p_joint 6.800000e-03

Joint ci ratio: 1.313196e-01	ci left: 6.360449e-03	ci right 7.261762e-03	k: 884	n:130000
Cons ci ratio: 1.739251e-01	ci left: 3.553729e-03	ci right 4.237923e-03	k: 505	n:130000
KS ci ratio: 2.634251e-02	ci left: 1.436256e-01	ci right 1.474672e-01	k: 18920	n:130000
OR56A1   130000 perm   33 sec   (3898 perm/sec)   p_kst 1.455385e-01   p_cons 3.884615e-03   p_joint 6.800000e-03

Joint ci ratio: 1.265479e-01	ci left: 6.376184e-03	ci right 7.244431e-03	k: 952	n:140000
Cons ci ratio: 1.677412e-01	ci left: 3.559718e-03	ci right 4.218235e-03	k: 543	n:140000
KS ci ratio: 2.539192e-02	ci left: 1.436212e-01	ci right 1.473220e-01	k: 20365	n:140000
OR56A1   140000 perm   36 sec   (3866 perm/sec)   p_kst 1.454643e-01   p_cons 3.878571e-03   p_joint 6.800000e-03

Joint ci ratio: 1.226245e-01	ci left: 6.351553e-03	ci right 7.187683e-03	k: 1014	n:150000
Cons ci ratio: 1.620335e-01	ci left: 3.571678e-03	ci right 4.207735e-03	k: 582	n:150000
KS ci ratio: 2.454983e-02	ci left: 1.434936e-01	ci right 1.470668e-01	k: 21791	n:150000
OR56A1   150000 perm   39 sec   (3821 perm/sec)   p_kst 1.452733e-01   p_cons 3.880000e-03   p_joint 6.760000e-03

Joint ci ratio: 1.188782e-01	ci left: 6.348560e-03	ci right 7.156969e-03	k: 1079	n:160000
Cons ci ratio: 1.575082e-01	ci left: 3.552450e-03	ci right 4.165744e-03	k: 616	n:160000
KS ci ratio: 2.378392e-02	ci left: 1.434087e-01	ci right 1.468667e-01	k: 23221	n:160000
OR56A1   160000 perm   42 sec   (3787 perm/sec)   p_kst 1.451312e-01   p_cons 3.850000e-03   p_joint 6.743750e-03

Joint ci ratio: 1.147513e-01	ci left: 6.426260e-03	ci right 7.214230e-03	k: 1158	n:170000
Cons ci ratio: 1.531061e-01	ci left: 3.547017e-03	ci right 4.140689e-03	k: 652	n:170000
KS ci ratio: 2.308002e-02	ci left: 1.433938e-01	ci right 1.467478e-01	k: 24661	n:170000
OR56A1   170000 perm   46 sec   (3671 perm/sec)   p_kst 1.450647e-01   p_cons 3.835294e-03   p_joint 6.811765e-03

Joint ci ratio: 1.112528e-01	ci left: 6.468745e-03	ci right 7.236156e-03	k: 1232	n:180000
Cons ci ratio: 1.487289e-01	ci left: 3.558447e-03	ci right 4.135491e-03	k: 691	n:180000
KS ci ratio: 2.241806e-02	ci left: 1.435699e-01	ci right 1.468304e-01	k: 26135	n:180000
OR56A1   180000 perm   49 sec   (3641 perm/sec)   p_kst 1.451944e-01   p_cons 3.838889e-03   p_joint 6.844444e-03

Joint ci ratio: 1.082646e-01	ci left: 6.481475e-03	ci right 7.228427e-03	k: 1301	n:190000
Cons ci ratio: 1.453067e-01	ci left: 3.538453e-03	ci right 4.097906e-03	k: 724	n:190000
KS ci ratio: 2.181505e-02	ci left: 1.436711e-01	ci right 1.468450e-01	k: 27598	n:190000
OR56A1   190000 perm   53 sec   (3608 perm/sec)   p_kst 1.452526e-01   p_cons 3.810526e-03   p_joint 6.847368e-03

Joint ci ratio: 1.053117e-01	ci left: 6.517526e-03	ci right 7.246877e-03	k: 1375	n:200000
Cons ci ratio: 1.407195e-01	ci left: 3.592951e-03	ci right 4.141583e-03	k: 772	n:200000
KS ci ratio: 2.127535e-02	ci left: 1.435641e-01	ci right 1.466562e-01	k: 29021	n:200000
OR56A1   200000 perm   56 sec   (3561 perm/sec)   p_kst 1.451050e-01   p_cons 3.860000e-03   p_joint 6.875000e-03

Joint ci ratio: 1.027666e-01	ci left: 6.527191e-03	ci right 7.238904e-03	k: 1444	n:210000
Cons ci ratio: 1.373834e-01	ci left: 3.596516e-03	ci right 4.131607e-03	k: 810	n:210000
KS ci ratio: 2.075987e-02	ci left: 1.436341e-01	ci right 1.466519e-01	k: 30479	n:210000
OR56A1   210000 perm   60 sec   (3528 perm/sec)   p_kst 1.451381e-01   p_cons 3.857143e-03   p_joint 6.876190e-03

Joint ci ratio: 9.501600e-02	ci left: 7.312334e-03	ci right 8.046181e-03	k: 1688	n:220000
Cons ci ratio: 1.333313e-01	ci left: 3.652623e-03	ci right 4.178762e-03	k: 860	n:220000
KS ci ratio: 2.027567e-02	ci left: 1.437529e-01	ci right 1.467019e-01	k: 31949	n:220000
OR56A1   220000 perm   63 sec   (3493 perm/sec)   p_kst 1.452227e-01   p_cons 3.909091e-03   p_joint 7.672727e-03

Joint ci ratio: 9.308094e-02	ci left: 7.295838e-03	ci right 8.012306e-03	k: 1759	n:230000
Cons ci ratio: 1.306292e-01	ci left: 3.645166e-03	ci right 4.158765e-03	k: 896	n:230000
KS ci ratio: 1.979406e-02	ci left: 1.442345e-01	ci right 1.471223e-01	k: 33505	n:230000
OR56A1   230000 perm   66 sec   (3460 perm/sec)   p_kst 1.456739e-01   p_cons 3.895652e-03   p_joint 7.647826e-03

Joint ci ratio: 9.123438e-02	ci left: 7.284929e-03	ci right 7.985374e-03	k: 1831	n:240000
Cons ci ratio: 1.279475e-01	ci left: 3.646497e-03	ci right 4.148935e-03	k: 934	n:240000
KS ci ratio: 1.937950e-02	ci left: 1.442368e-01	ci right 1.470635e-01	k: 34955	n:240000
OR56A1   240000 perm   70 sec   (3426 perm/sec)   p_kst 1.456458e-01   p_cons 3.891667e-03   p_joint 7.629167e-03

Joint ci ratio: 8.930466e-02	ci left: 7.306311e-03	ci right 7.993178e-03	k: 1911	n:250000
Cons ci ratio: 1.254891e-01	ci left: 3.643945e-03	ci right 4.135667e-03	k: 971	n:250000
KS ci ratio: 1.898658e-02	ci left: 1.442833e-01	ci right 1.470529e-01	k: 36416	n:250000
OR56A1   250000 perm   74 sec   (3358 perm/sec)   p_kst 1.456640e-01   p_cons 3.884000e-03   p_joint 7.644000e-03

Joint ci ratio: 8.738199e-02	ci left: 7.345005e-03	ci right 8.019885e-03	k: 1996	n:260000
Cons ci ratio: 1.227406e-01	ci left: 3.667773e-03	ci right 4.151082e-03	k: 1015	n:260000
KS ci ratio: 1.858792e-02	ci left: 1.447099e-01	ci right 1.474288e-01	k: 37977	n:260000
OR56A1   260000 perm   79 sec   (3307 perm/sec)   p_kst 1.460654e-01   p_cons 3.903846e-03   p_joint 7.676923e-03

Joint ci ratio: 8.566133e-02	ci left: 7.366480e-03	ci right 8.029338e-03	k: 2077	n:270000
Cons ci ratio: 1.202790e-01	ci left: 3.682758e-03	ci right 4.157617e-03	k: 1057	n:270000
KS ci ratio: 1.822684e-02	ci left: 1.449210e-01	ci right 1.475904e-01	k: 39488	n:270000
OR56A1   270000 perm   83 sec   (3261 perm/sec)   p_kst 1.462519e-01   p_cons 3.914815e-03   p_joint 7.692593e-03

Joint ci ratio: 8.399927e-02	ci left: 7.393536e-03	ci right 8.045287e-03	k: 2160	n:280000
Cons ci ratio: 1.179598e-01	ci left: 3.696764e-03	ci right 4.163597e-03	k: 1099	n:280000
KS ci ratio: 1.790418e-02	ci left: 1.448648e-01	ci right 1.474854e-01	k: 40928	n:280000
OR56A1   280000 perm   88 sec   (3192 perm/sec)   p_kst 1.461714e-01   p_cons 3.925000e-03   p_joint 7.714286e-03

Joint ci ratio: 8.246739e-02	ci left: 7.412086e-03	ci right 8.052983e-03	k: 2241	n:290000
Cons ci ratio: 1.159739e-01	ci left: 3.696490e-03	ci right 4.154891e-03	k: 1137	n:290000
KS ci ratio: 1.758640e-02	ci left: 1.449778e-01	ci right 1.475534e-01	k: 42416	n:290000
OR56A1   290000 perm   92 sec   (3144 perm/sec)   p_kst 1.462621e-01   p_cons 3.920690e-03   p_joint 7.727586e-03

Joint ci ratio: 8.108675e-02	ci left: 7.416435e-03	ci right 8.046464e-03	k: 2318	n:300000
Cons ci ratio: 1.140851e-01	ci left: 3.696295e-03	ci right 4.146704e-03	k: 1175	n:300000
KS ci ratio: 1.727943e-02	ci left: 1.451633e-01	ci right 1.476968e-01	k: 43928	n:300000
OR56A1   300000 perm   97 sec   (3100 perm/sec)   p_kst 1.464267e-01   p_cons 3.916667e-03   p_joint 7.726667e-03

Joint ci ratio: 7.985723e-02	ci left: 7.404777e-03	ci right 8.023834e-03	k: 2390	n:310000
Cons ci ratio: 1.124251e-01	ci left: 3.686764e-03	ci right 4.129041e-03	k: 1210	n:310000
KS ci ratio: 1.698997e-02	ci left: 1.453084e-01	ci right 1.478015e-01	k: 45431	n:310000
OR56A1   310000 perm   101 sec   (3056 perm/sec)   p_kst 1.465516e-01   p_cons 3.903226e-03   p_joint 7.709677e-03

Joint ci ratio: 7.850552e-02	ci left: 7.427620e-03	ci right 8.037596e-03	k: 2473	n:320000
Cons ci ratio: 1.106574e-01	ci left: 3.690028e-03	ci right 4.125282e-03	k: 1249	n:320000
KS ci ratio: 1.672815e-02	ci left: 1.452422e-01	ci right 1.476954e-01	k: 46869	n:320000
OR56A1   320000 perm   106 sec   (3014 perm/sec)   p_kst 1.464656e-01   p_cons 3.903125e-03   p_joint 7.728125e-03

Joint ci ratio: 8.164904e-02	ci left: 6.653047e-03	ci right 7.222330e-03	k: 2288	n:330000
Cons ci ratio: 1.092260e-01	ci left: 3.675457e-03	ci right 4.103024e-03	k: 1282	n:330000
KS ci ratio: 1.647488e-02	ci left: 1.452287e-01	ci right 1.476442e-01	k: 48323	n:330000
OR56A1   330000 perm   110 sec   (2989 perm/sec)   p_kst 1.464333e-01   p_cons 3.884848e-03   p_joint 6.933333e-03

Joint ci ratio: 8.029145e-02	ci left: 6.682140e-03	ci right 7.243960e-03	k: 2366	n:340000
Cons ci ratio: 1.074398e-01	ci left: 3.690401e-03	ci right 4.112242e-03	k: 1325	n:340000
KS ci ratio: 1.622704e-02	ci left: 1.453042e-01	ci right 1.476842e-01	k: 49807	n:340000
OR56A1   340000 perm   115 sec   (2964 perm/sec)   p_kst 1.464912e-01   p_cons 3.897059e-03   p_joint 6.958824e-03

Joint ci ratio: 7.926098e-02	ci left: 6.664828e-03	ci right 7.217669e-03	k: 2428	n:350000
Cons ci ratio: 1.061675e-01	ci left: 3.673945e-03	ci right 4.088621e-03	k: 1357	n:350000
KS ci ratio: 1.599994e-02	ci left: 1.452218e-01	ci right 1.475669e-01	k: 51237	n:350000
OR56A1   350000 perm   119 sec   (2938 perm/sec)   p_kst 1.463914e-01   p_cons 3.877143e-03   p_joint 6.937143e-03

Joint ci ratio: 7.825338e-02	ci left: 6.651245e-03	ci right 7.195626e-03	k: 2491	n:360000
Cons ci ratio: 1.046750e-01	ci left: 3.677368e-03	ci right 4.086237e-03	k: 1396	n:360000
KS ci ratio: 1.577351e-02	ci left: 1.452799e-01	ci right 1.475924e-01	k: 52716	n:360000
OR56A1   360000 perm   124 sec   (2911 perm/sec)   p_kst 1.464333e-01   p_cons 3.877778e-03   p_joint 6.919444e-03

Joint ci ratio: 7.732897e-02	ci left: 6.630487e-03	ci right 7.166469e-03	k: 2551	n:370000
Cons ci ratio: 1.036065e-01	ci left: 3.654315e-03	ci right 4.056220e-03	k: 1425	n:370000
KS ci ratio: 1.555206e-02	ci left: 1.454051e-01	ci right 1.476869e-01	k: 54221	n:370000
OR56A1   370000 perm   128 sec   (2885 perm/sec)   p_kst 1.465432e-01   p_cons 3.851351e-03   p_joint 6.894595e-03

Joint ci ratio: 7.631897e-02	ci left: 6.631510e-03	ci right 7.160262e-03	k: 2619	n:380000
Cons ci ratio: 1.025348e-01	ci left: 3.635059e-03	ci right 4.030461e-03	k: 1455	n:380000
KS ci ratio: 1.534840e-02	ci left: 1.453823e-01	ci right 1.476336e-01	k: 55672	n:380000
OR56A1   380000 perm   133 sec   (2860 perm/sec)   p_kst 1.465053e-01   p_cons 3.828947e-03   p_joint 6.892105e-03

Joint ci ratio: 7.533343e-02	ci left: 6.635040e-03	ci right 7.156942e-03	k: 2688	n:390000
Cons ci ratio: 1.012224e-01	ci left: 3.636805e-03	ci right 4.027034e-03	k: 1493	n:390000
KS ci ratio: 1.514291e-02	ci left: 1.455194e-01	ci right 1.477423e-01	k: 57185	n:390000
OR56A1   390000 perm   138 sec   (2836 perm/sec)   p_kst 1.466282e-01   p_cons 3.828205e-03   p_joint 6.892308e-03

Joint ci ratio: 7.424968e-02	ci left: 6.662973e-03	ci right 7.179208e-03	k: 2767	n:400000
Cons ci ratio: 9.999199e-02	ci left: 3.636058e-03	ci right 4.021185e-03	k: 1530	n:400000
KS ci ratio: 1.494546e-02	ci left: 1.456497e-01	ci right 1.478454e-01	k: 58698	n:400000
OR56A1   400000 perm   142 sec   (2810 perm/sec)   p_kst 1.467450e-01   p_cons 3.825000e-03   p_joint 6.917500e-03

Outputting figure to mutsig2_images.part000000000122/OR56A1.2_961_400000_0.14674_0.003825_0.0069175.png
                gene_name: OR56A1
               theta_stop: 0.100 
                    nperm: 400000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.0038 
      ci_cons_bounds_left: 0.0036 
     ci_cons_bounds_right: 0.0040 
                  p_joint: 0.0069 
     ci_joint_bounds_left: 0.0067 
    ci_joint_bounds_right: 0.0072 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000122
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 122 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1707>
Subject: Job 8704295: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1707>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000123> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:37:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000123.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000123.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 123  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000123.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    136.92 sec.
    Max Memory :      4713 MB
    Max Swap   :      7597 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
123
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 123
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 123: processing genes 11038 - 11127
Calculating significance of each gene.
Using projection method.
11038	OR5B3	9.781238e-02
11039	OR5C1	1
11040	OR5D13	1.240237e-01
11041	OR5D14	1
11042	OR5D16	1
11043	OR5D18	5.356750e-02
11044	OR5F1	1
11045	OR5H1	1
11046	OR5H14	9.314858e-03
11047	OR5H15	1
11048	OR5H2	1
11049	OR5H6	1
11050	OR5I1	1
11051	OR5J2	3.519749e-02
11052	OR5K1	1.211649e-01
11053	OR5K2	1
11054	OR5K3	1
11055	OR5K4	1
11056	OR5L1	1
11057	OR5L2	3.999760e-02
11058	OR5M1	1
11059	OR5M10	1
11060	OR5M11	1
11061	OR5M3	1.577789e-02
11062	OR5M8	1
11063	OR5M9	1
11064	OR5P2	1
11065	OR5P3	1
11066	OR5R1	1
11067	OR5T1	1
11068	OR5T2	1.412585e-02
11069	OR5T3	1
11070	OR5V1	1.168698e-01
11071	OR5W2	1
11072	OR6A2	1
11073	OR6B1	1
11074	OR6B2	1
11075	OR6B3	1
11076	OR6C1	1
11077	OR6C2	1
11078	OR6C3	3.024792e-02
11079	OR6C4	1
11080	OR6C6	1
11081	OR6C65	1
11082	OR6C68	1
11083	OR6C70	1
11084	OR6C74	1
11085	OR6C75	1
11086	OR6C76	1
11087	OR6F1	1
11088	OR6K2	8.536210e-02
11089	OR6K3	1
11090	OR6K6	7.530014e-02
11091	OR6M1	1
11092	OR6N1	1
11093	OR6N2	1
11094	OR6Q1	1.025657e-01
11095	OR6S1	1.176628e-01
11096	OR6T1	1
11097	OR6V1	9.570999e-02
11098	OR6X1	1
11099	OR6Y1	1
11100	OR7A10	1
11101	OR7A17	1
11102	OR7A5	1.338879e-01
11103	OR7C1	1
11104	OR7C2	1
11105	OR7D2	1
11106	OR7D4	1
11107	OR7E24	1
11108	OR7G1	1
11109	OR7G2	1
11110	OR7G3	1
11111	OR8A1	1
11112	OR8B12	1
11113	OR8B2	1
11114	OR8B3	1
11115	OR8B4	1
11116	OR8B8	1
11117	OR8D1	1
11118	OR8D2	1
11119	OR8D4	1
11120	OR8G1	1
11121	OR8G2	1
11122	OR8G5	1
11123	OR8H1	1
11124	OR8H2	9.184668e-03
11125	OR8H3	1.198756e-01
11126	OR8I2	1
11127	OR8J1	1
Done

Running MutSig 2:
Scatter job 123: processing genes 11038 - 11127
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
OR8H2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.555493e-02	ci left: 8.571254e-01	ci right 8.706618e-01	k: 8640	n:10000
KS ci ratio: 3.103856e-02	ci left: 6.049788e-01	ci right 6.241544e-01	k: 6146	n:10000
OR8H2   10000 perm   2 sec   (6251 perm/sec)   p_kst 6.146000e-01   p_cons 8.640000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000123/OR8H2.2_941_10000_0.6146_0.864_1.png
                gene_name: OR8H2
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.87 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000123
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 123 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1647>
Subject: Job 8704296: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1647>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000124> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:37:28 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000124.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000124.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 124  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000124.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    150.14 sec.
    Max Memory :      5514 MB
    Max Swap   :      8356 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
124
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 124
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 124: processing genes 11128 - 11218
Calculating significance of each gene.
Using projection method.
11128	OR8J3	1
11129	OR8K1	1
11130	OR8K3	1
11131	OR8K5	1.098375e-01
11132	OR8S1	1
11133	OR8U8	1
11134	OR9A2	1
11135	OR9A4	1
11136	OR9G1	1
11137	OR9G4	1
11138	OR9G9	1
11139	OR9I1	2.279011e-02
11140	OR9K2	1
11141	OR9Q1	1
11142	OR9Q2	1
11143	ORAI1	1
11144	ORAI2	1.183583e-01
11145	ORAI3	1
11146	ORAOV1	1
11147	ORC1L	1.617687e-01
In gene ORC2L the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 1798    n = 1	mu =   2.33e-07
11148	ORC2L	1.871059e-01
11149	ORC3L	1
11150	ORC4L	1
11151	ORC5L	1
11152	ORC6L	1
11153	ORM1	1
11154	ORM2	1
11155	ORMDL1	1
11156	ORMDL2	1
11157	ORMDL3	1
11158	OS9	1
11159	OSBP	2.072138e-01
11160	OSBP2	1
11161	OSBPL10	1
11162	OSBPL11	1
11163	OSBPL1A	1
11164	OSBPL2	1
11165	OSBPL3	1
11166	OSBPL5	1
11167	OSBPL6	1
11168	OSBPL7	1
11169	OSBPL8	1
In gene OSBPL9 the following bins exceed PROBCAP:
    THCA-DJ-A2PR-TP	categ 6	N = 2319    n = 1	mu =   1.72e-07
11170	OSBPL9	2.046325e-01
11171	OSCAR	1
11172	OSCP1	1
11173	OSGEP	1
11174	OSGEPL1	1
11175	OSGIN1	1
11176	OSGIN2	1
11177	OSM	1
11178	OSMR	2.298292e-01
11179	OSR1	1
11180	OSR2	1
11181	OSTBETA	1
11182	OSTC	1.624026e-02
11183	OSTF1	1
11184	OSTM1	1
11185	OSTN	1
11186	OSTalpha	1
11187	OTC	1
11188	OTOA	1
11189	OTOF	1
11190	OTOL1	1
11191	OTOP1	1
11192	OTOP2	1
11193	OTOP3	9.186369e-02
11194	OTOR	1
11195	OTOS	1
11196	OTP	1
11197	OTUB1	1.752652e-02
11198	OTUB2	1
11199	OTUD3	1
11200	OTUD4	1
11201	OTUD5	1
11202	OTUD6A	9.376698e-02
11203	OTUD6B	1
11204	OTUD7A	1
11205	OTUD7B	1
11206	OTX1	4.606959e-02
11207	OTX2	1
11208	OVCA2	1
11209	OVCH1	3.322910e-01
11210	OVCH2	1
11211	OVGP1	1.698301e-01
11212	OVOL1	1
11213	OVOL2	1
11214	OXA1L	1
11215	OXCT1	1
11216	OXCT2	1
11217	OXER1	1.351770e-01
11218	OXGR1	1
Done

Running MutSig 2:
Scatter job 124: processing genes 11128 - 11218
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
OXER1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.430079e-02	ci left: 5.565186e-01	ci right 5.760428e-01	k: 5663	n:10000
Cons ci ratio: 4.226904e-02	ci left: 4.524903e-01	ci right 4.721317e-01	k: 4623	n:10000
KS ci ratio: 9.943597e-02	ci left: 1.277721e-01	ci right 1.412416e-01	k: 1344	n:10000
OXER1   10000 perm   2 sec   (6189 perm/sec)   p_kst 1.344000e-01   p_cons 4.623000e-01   p_joint 5.663000e-01

Outputting figure to mutsig2_images.part000000000124/OXER1.2_1276_10000_0.1344_0.4623_0.5663.png
                gene_name: OXER1
               theta_stop: 0.099 
                    nperm: 10000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.13 
       ci_ks_bounds_right: 0.14 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 0.57 
     ci_joint_bounds_left: 0.56 
    ci_joint_bounds_right: 0.58 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000124
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 124 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1725>
Subject: Job 8704297: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1725>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000125> was used as the working directory.
Started at Thu Nov 15 19:35:22 2012
Results reported at Thu Nov 15 19:37:07 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000125.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000125.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 125  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000125.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :     94.46 sec.
    Max Memory :      5693 MB
    Max Swap   :      8458 MB

    Max Processes  :         7
    Max Threads    :        67

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
125
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 125
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 125: processing genes 11219 - 11308
Calculating significance of each gene.
Using projection method.
11219	OXNAD1	1
11220	OXR1	2.334278e-01
11221	OXSM	1
11222	OXSR1	1
11223	OXT	1
11224	OXTR	1
11225	P2RX1	1
11226	P2RX2	1
11227	P2RX3	1
11228	P2RX4	1
11229	P2RX5	1
11230	P2RX6	1
11231	P2RX7	1
11232	P2RY1	1
11233	P2RY10	1
11234	P2RY11	1
11235	P2RY12	1
11236	P2RY13	1
11237	P2RY14	1
11238	P2RY2	1
11239	P2RY4	1
11240	P2RY6	1
11241	P2RY8	1
11242	P4HA1	1
11243	P4HA2	1
11244	P4HA3	1
11245	P4HB	1
11246	P4HTM	1
11247	PA2G4	1.369978e-01
11248	PAAF1	1
11249	PABPC1	2.643241e-01
11250	PABPC1L	1
11251	PABPC3	1.562452e-01
11252	PABPC4	1
11253	PABPC5	1
11254	PABPN1	5.996947e-02
11255	PABPN1L	1
11256	PACRG	1
11257	PACRGL	1
11258	PACS1	3.248353e-01
11259	PACS2	1
11260	PACSIN1	1
11261	PACSIN2	1
11262	PACSIN3	2.218512e-01
11263	PADI1	1
11264	PADI2	5.367988e-02
11265	PADI3	1
11266	PADI4	1
11267	PADI6	1
11268	PAEP	1
11269	PAF1	1
11270	PAFAH1B1	1
11271	PAFAH1B2	1
11272	PAFAH1B3	1
11273	PAFAH2	1
11274	PAG1	1
11275	PAGE1	1
11276	PAGE2	1
11277	PAGE2B	1
11278	PAGE4	1
11279	PAGE5	1
11280	PAH	1
11281	PAICS	1
11282	PAIP1	1
11283	PAIP2	1
11284	PAIP2B	1
11285	PAK1	1
11286	PAK1IP1	1
11287	PAK2	1
11288	PAK3	5.126870e-02
11289	PAK4	1
11290	PAK6	1
11291	PAK7	6.305741e-02
11292	PALB2	1
11293	PALLD	1
11294	PALM	1
11295	PALM2	1
11296	PALM2-AKAP2	3.671182e-01
11297	PALMD	1.789094e-02
11298	PAM	1
11299	PAMR1	1
11300	PAN2	1
11301	PAN3	1.611185e-01
11302	PANK1	1
11303	PANK2	1
11304	PANK3	1
11305	PANK4	1
11306	PANX1	1.344776e-01
In gene PANX2 the following bins exceed PROBCAP:
    THCA-E3-A3E3-TP	categ 6	N = 803     n = 1	mu =   1.76e-07
11307	PANX2	9.080724e-03
11308	PANX3	1
Done

Running MutSig 2:
Scatter job 125: processing genes 11219 - 11308
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PALMD
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.345253e-02	ci left: 7.276467e-01	ci right 7.450155e-01	k: 7364	n:10000
Cons ci ratio: 2.948673e-02	ci left: 6.290949e-01	ci right 6.480243e-01	k: 6386	n:10000
KS ci ratio: 6.242548e-02	ci left: 2.738884e-01	ci right 2.916384e-01	k: 2827	n:10000
PALMD   10000 perm   1 sec   (6731 perm/sec)   p_kst 2.827000e-01   p_cons 6.386000e-01   p_joint 7.364000e-01

Outputting figure to mutsig2_images.part000000000125/PALMD.2_1688_10000_0.2827_0.6386_0.7364.png
                gene_name: PALMD
               theta_stop: 0.062 
                    nperm: 10000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.27 
       ci_ks_bounds_right: 0.29 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 0.74 
     ci_joint_bounds_left: 0.73 
    ci_joint_bounds_right: 0.75 

Current progress: 50 percent done.
PANX2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.553508e-02	ci left: 8.574316e-01	ci right 8.709555e-01	k: 8643	n:10000
KS ci ratio: 4.958674e-02	ci left: 3.749500e-01	ci right 3.941173e-01	k: 3845	n:10000
PANX2   10000 perm   1 sec   (6984 perm/sec)   p_kst 3.845000e-01   p_cons 8.643000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000125/PANX2.2_2046_10000_0.3845_0.8643_1.png
                gene_name: PANX2
               theta_stop: 0.050 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.39 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.87 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000125
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 125 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1704>
Subject: Job 8704299: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1704>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000126> was used as the working directory.
Started at Thu Nov 15 19:35:30 2012
Results reported at Thu Nov 15 20:55:35 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000126.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000126.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 126  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000126.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   4869.08 sec.
    Max Memory :      6074 MB
    Max Swap   :      8540 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
126
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 126
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 126: processing genes 11309 - 11399
Calculating significance of each gene.
Using projection method.
11309	PAOX	1
11310	PAPD4	1
11311	PAPD5	1
11312	PAPD7	1
11313	PAPL	1
11314	PAPLN	1
11315	PAPOLA	1
11316	PAPOLB	1
In gene PAPOLG the following bins exceed PROBCAP:
    THCA-FE-A23A-TP	categ 6	N = 1900    n = 1	mu =   6.85e-08
11317	PAPOLG	7.915764e-02
11318	PAPPA	4.127170e-01
11319	PAPPA2	1
In gene PAPSS1 the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 1923    n = 1	mu =   1.33e-07
11320	PAPSS1	1.359523e-01
11321	PAPSS2	2.273879e-01
11322	PAQR3	1
11323	PAQR4	1
11324	PAQR5	1
11325	PAQR6	9.948165e-02
11326	PAQR7	1
11327	PAQR8	1
11328	PAQR9	1
11329	PARD3	4.244062e-01
11330	PARD3B	1
11331	PARD6A	1
11332	PARD6B	1.130091e-02
11333	PARD6G	1
11334	PARK2	1
11335	PARK7	1
11336	PARL	1
11337	PARM1	1
11338	PARN	1
11339	PARP1	1
11340	PARP10	1
11341	PARP11	1
11342	PARP12	1
11343	PARP14	5.420656e-01
11344	PARP15	1
11345	PARP16	1
11346	PARP2	1
11347	PARP3	1
11348	PARP4	1
11349	PARP6	1
11350	PARP8	1
11351	PARP9	1.974523e-01
11352	PARS2	1
11353	PARVA	1
11354	PARVB	1
11355	PARVG	1
11356	PASD1	1
11357	PASK	1
11358	PATE1	1
11359	PATE2	1
11360	PATL1	2.286339e-01
11361	PATZ1	1
11362	PAWR	1.109353e-04
11363	PAX1	1
11364	PAX2	1
11365	PAX3	1
11366	PAX4	1
11367	PAX5	1
11368	PAX6	1
11369	PAX7	1
11370	PAX8	1
11371	PAX9	1
11372	PAXIP1	1
In gene PBK the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 997     n = 1	mu =   2.02e-07
11373	PBK	9.561632e-02
11374	PBLD	1
11375	PBOV1	1
11376	PBRM1	1
11377	PBX1	1
11378	PBX2	1
11379	PBX3	1
11380	PBX4	1
11381	PBXIP1	3.948596e-02
11382	PC	2.738077e-01
11383	PCBD1	1
11384	PCBD2	1
11385	PCBP1	1
11386	PCBP2	1
11387	PCBP3	1
11388	PCBP4	1
11389	PCCA	1
11390	PCCB	1
11391	PCDH1	1
11392	PCDH10	2.126638e-01
11393	PCDH11X	9.475995e-03
11394	PCDH12	1
11395	PCDH15	5.732548e-01
11396	PCDH17	1
11397	PCDH18	1
11398	PCDH19	1
11399	PCDH20	2.903439e-01
Done

Running MutSig 2:
Scatter job 126: processing genes 11309 - 11399
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PCDH11X
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.184518e-03	ci left: 9.801637e-01	ci right 9.853496e-01	k: 9829	n:10000
Cons ci ratio: 1.538251e-02	ci left: 8.597792e-01	ci right 8.732065e-01	k: 8666	n:10000
KS ci ratio: 1.432059e-02	ci left: 8.758224e-01	ci right 8.885540e-01	k: 8823	n:10000
PCDH11X   10000 perm   2 sec   (4143 perm/sec)   p_kst 8.823000e-01   p_cons 8.666000e-01   p_joint 9.829000e-01

Outputting figure to mutsig2_images.part000000000126/PCDH11X.3_4194_10000_0.8823_0.8666_0.9829.png
                gene_name: PCDH11X
               theta_stop: 0.015 
                    nperm: 10000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.89 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.87 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 25 percent done.
PARD6B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.326580e-01	ci left: 7.494951e-02	ci right 8.569647e-02	k: 802	n:10000
Cons ci ratio: 1.912852e-01	ci left: 3.643453e-02	ci right 4.423614e-02	k: 402	n:10000
KS ci ratio: 3.795959e-02	ci left: 5.061517e-01	ci right 5.258389e-01	k: 5160	n:10000
PARD6B   10000 perm   1 sec   (6701 perm/sec)   p_kst 5.160000e-01   p_cons 4.020000e-02   p_joint 8.020000e-02

Joint ci ratio: 9.323836e-02	ci left: 7.740166e-02	ci right 8.502062e-02	k: 1623	n:20000
Cons ci ratio: 1.306038e-01	ci left: 4.027865e-02	ci right 4.595515e-02	k: 861	n:20000
KS ci ratio: 2.698617e-02	ci left: 5.063964e-01	ci right 5.202997e-01	k: 10267	n:20000
PARD6B   20000 perm   3 sec   (5919 perm/sec)   p_kst 5.133500e-01   p_cons 4.305000e-02   p_joint 8.115000e-02

Joint ci ratio: 7.628280e-02	ci left: 7.780565e-02	ci right 8.400913e-02	k: 2426	n:30000
Cons ci ratio: 1.077757e-01	ci left: 3.995277e-02	ci right 4.453642e-02	k: 1266	n:30000
KS ci ratio: 2.212080e-02	ci left: 5.057260e-01	ci right 5.170718e-01	k: 15342	n:30000
PARD6B   30000 perm   5 sec   (5670 perm/sec)   p_kst 5.114000e-01   p_cons 4.220000e-02   p_joint 8.086667e-02

Joint ci ratio: 8.379247e-02	ci left: 4.969724e-02	ci right 5.406811e-02	k: 2074	n:40000
Cons ci ratio: 9.372372e-02	ci left: 3.993288e-02	ci right 4.388397e-02	k: 1675	n:40000
KS ci ratio: 1.912867e-02	ci left: 5.072383e-01	ci right 5.170599e-01	k: 20486	n:40000
PARD6B   40000 perm   7 sec   (5493 perm/sec)   p_kst 5.121500e-01   p_cons 4.187500e-02   p_joint 5.185000e-02

Outputting figure to mutsig2_images.part000000000126/PARD6B.2_1131_40000_0.51215_0.041875_0.05185.png
                gene_name: PARD6B
               theta_stop: 0.094 
                    nperm: 40000 
                     p_ks: 0.51 
        ci_ks_bounds_left: 0.51 
       ci_ks_bounds_right: 0.52 
                   p_cons: 0.042 
      ci_cons_bounds_left: 0.040 
     ci_cons_bounds_right: 0.044 
                  p_joint: 0.052 
     ci_joint_bounds_left: 0.050 
    ci_joint_bounds_right: 0.054 

Current progress: 50 percent done.
PAWR
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.380435e-03	ci left: 9.787712e-01	ci right 9.841431e-01	k: 9816	n:10000
Cons ci ratio: 3.640140e-02	ci left: 5.270673e-01	ci right 5.467112e-01	k: 5369	n:10000
KS ci ratio: 1.488668e-02	ci left: 8.673368e-01	ci right 8.804445e-01	k: 8740	n:10000
PAWR   10000 perm   1 sec   (6740 perm/sec)   p_kst 8.740000e-01   p_cons 5.369000e-01   p_joint 9.816000e-01

Outputting figure to mutsig2_images.part000000000126/PAWR.2_1047_10000_0.874_0.5369_0.9816.png
                gene_name: PAWR
               theta_stop: 0.036 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.54 
      ci_cons_bounds_left: 0.53 
     ci_cons_bounds_right: 0.55 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.98 

Current progress: 75 percent done.
PBXIP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.109146e-01	ci left: 2.859150e-03	ci right 5.442922e-03	k: 40	n:10000
Cons ci ratio: 1.225679e-02	ci left: 9.052487e-01	ci right 9.165106e-01	k: 9110	n:10000
KS ci ratio: 2.262761e+00	ci left: 2.422185e-05	ci right 7.222801e-04	k: 2	n:10000
PBXIP1   10000 perm   2 sec   (6277 perm/sec)   p_kst 2.000000e-04   p_cons 9.110000e-01   p_joint 4.000000e-03

Joint ci ratio: 6.352878e-01	ci left: 1.302895e-03	ci right 2.549089e-03	k: 37	n:20000
Cons ci ratio: 8.463499e-03	ci left: 9.107942e-01	ci right 9.185847e-01	k: 18295	n:20000
KS ci ratio: 1.959755e+00	ci left: 3.093467e-05	ci right 4.383005e-04	k: 3	n:20000
PBXIP1   20000 perm   4 sec   (5477 perm/sec)   p_kst 1.500000e-04   p_cons 9.147500e-01   p_joint 1.850000e-03

Joint ci ratio: 5.595332e-01	ci left: 1.179942e-03	ci right 2.120815e-03	k: 48	n:30000
Cons ci ratio: 6.975470e-03	ci left: 9.100251e-01	ci right 9.164280e-01	k: 27398	n:30000
KS ci ratio: 1.481423e+00	ci left: 7.339990e-05	ci right 4.352646e-04	k: 6	n:30000
PBXIP1   30000 perm   6 sec   (5205 perm/sec)   p_kst 2.000000e-04   p_cons 9.132667e-01   p_joint 1.600000e-03

Joint ci ratio: 3.249437e-01	ci left: 3.036855e-03	ci right 4.236984e-03	k: 144	n:40000
Cons ci ratio: 6.043288e-03	ci left: 9.103984e-01	ci right 9.159415e-01	k: 36528	n:40000
KS ci ratio: 9.505257e-01	ci left: 2.286513e-04	ci right 6.494939e-04	k: 16	n:40000
PBXIP1   40000 perm   8 sec   (5024 perm/sec)   p_kst 4.000000e-04   p_cons 9.132000e-01   p_joint 3.600000e-03

Joint ci ratio: 3.046646e-01	ci left: 2.797855e-03	ci right 3.821154e-03	k: 164	n:50000
Cons ci ratio: 5.405862e-03	ci left: 9.106779e-01	ci right 9.156340e-01	k: 45659	n:50000
KS ci ratio: 8.991298e-01	ci left: 2.133723e-04	ci right 5.688958e-04	k: 18	n:50000
PBXIP1   50000 perm   10 sec   (4881 perm/sec)   p_kst 3.600000e-04   p_cons 9.131800e-01   p_joint 3.280000e-03

Joint ci ratio: 4.435603e-01	ci left: 1.012915e-03	ci right 1.603689e-03	k: 77	n:60000
Cons ci ratio: 4.931059e-03	ci left: 9.110200e-01	ci right 9.155399e-01	k: 54798	n:60000
KS ci ratio: 8.763852e-01	ci left: 1.906644e-04	ci right 4.944703e-04	k: 19	n:60000
PBXIP1   60000 perm   13 sec   (4763 perm/sec)   p_kst 3.166667e-04   p_cons 9.133000e-01   p_joint 1.283333e-03

Joint ci ratio: 2.663085e-01	ci left: 2.675081e-03	ci right 3.509809e-03	k: 215	n:70000
Cons ci ratio: 4.553694e-03	ci left: 9.115955e-01	ci right 9.157702e-01	k: 63959	n:70000
KS ci ratio: 7.686270e-01	ci left: 2.311369e-04	ci right 5.271685e-04	k: 25	n:70000
PBXIP1   70000 perm   15 sec   (4666 perm/sec)   p_kst 3.571429e-04   p_cons 9.137000e-01   p_joint 3.071429e-03

Joint ci ratio: 1.982669e-01	ci left: 4.380366e-03	ci right 5.356074e-03	k: 388	n:80000
Cons ci ratio: 4.260238e-03	ci left: 9.117076e-01	ci right 9.156123e-01	k: 73094	n:80000
KS ci ratio: 7.039120e-01	ci left: 2.530248e-04	ci right 5.352929e-04	k: 30	n:80000
PBXIP1   80000 perm   17 sec   (4577 perm/sec)   p_kst 3.750000e-04   p_cons 9.136750e-01   p_joint 4.850000e-03

Joint ci ratio: 2.167140e-01	ci left: 3.229741e-03	ci right 4.025003e-03	k: 325	n:90000
Cons ci ratio: 4.014235e-03	ci left: 9.119138e-01	ci right 9.155928e-01	k: 82239	n:90000
KS ci ratio: 6.531990e-01	ci left: 2.708898e-04	ci right 5.408092e-04	k: 35	n:90000
PBXIP1   90000 perm   20 sec   (4493 perm/sec)   p_kst 3.888889e-04   p_cons 9.137667e-01   p_joint 3.611111e-03

Joint ci ratio: 1.856206e-01	ci left: 4.027819e-03	ci right 4.861326e-03	k: 443	n:100000
Cons ci ratio: 3.794595e-03	ci left: 9.125783e-01	ci right 9.160576e-01	k: 91433	n:100000
KS ci ratio: 5.842247e-01	ci left: 3.197223e-04	ci right 5.906350e-04	k: 44	n:100000
PBXIP1   100000 perm   23 sec   (4414 perm/sec)   p_kst 4.400000e-04   p_cons 9.143300e-01   p_joint 4.430000e-03

Joint ci ratio: 1.900039e-01	ci left: 3.488289e-03	ci right 4.229157e-03	k: 423	n:110000
Cons ci ratio: 3.622252e-03	ci left: 9.124744e-01	ci right 9.157946e-01	k: 100556	n:110000
KS ci ratio: 5.542432e-01	ci left: 3.295673e-04	ci right 5.888723e-04	k: 49	n:110000
PBXIP1   110000 perm   25 sec   (4337 perm/sec)   p_kst 4.454545e-04   p_cons 9.141455e-01   p_joint 3.845455e-03

Joint ci ratio: 2.658651e-01	ci left: 1.568118e-03	ci right 2.056463e-03	k: 216	n:120000
Cons ci ratio: 3.460747e-03	ci left: 9.128785e-01	ci right 9.160514e-01	k: 109737	n:120000
KS ci ratio: 5.383322e-01	ci left: 3.236505e-04	ci right 5.682207e-04	k: 52	n:120000
PBXIP1   120000 perm   28 sec   (4277 perm/sec)   p_kst 4.333333e-04   p_cons 9.144750e-01   p_joint 1.800000e-03

Joint ci ratio: 2.715845e-01	ci left: 1.382907e-03	ci right 1.824418e-03	k: 207	n:130000
Cons ci ratio: 3.108772e-03	ci left: 9.229729e-01	ci right 9.258543e-01	k: 120175	n:130000
KS ci ratio: 5.191008e-01	ci left: 3.254143e-04	ci right 5.593537e-04	k: 56	n:130000
PBXIP1   130000 perm   31 sec   (4217 perm/sec)   p_kst 4.307692e-04   p_cons 9.244231e-01   p_joint 1.592308e-03

Joint ci ratio: 2.571464e-01	ci left: 1.444210e-03	ci right 1.876850e-03	k: 231	n:140000
Cons ci ratio: 2.995869e-03	ci left: 9.230173e-01	ci right 9.257937e-01	k: 129418	n:140000
KS ci ratio: 4.684108e-01	ci left: 3.834919e-04	ci right 6.237014e-04	k: 69	n:140000
PBXIP1   140000 perm   34 sec   (4158 perm/sec)   p_kst 4.928571e-04   p_cons 9.244143e-01   p_joint 1.650000e-03

Joint ci ratio: 1.563469e-01	ci left: 3.846969e-03	ci right 4.505757e-03	k: 625	n:150000
Cons ci ratio: 2.887112e-03	ci left: 9.234136e-01	ci right 9.260900e-01	k: 138714	n:150000
KS ci ratio: 4.495394e-01	ci left: 3.933014e-04	ci right 6.267146e-04	k: 75	n:150000
PBXIP1   150000 perm   37 sec   (4098 perm/sec)   p_kst 5.000000e-04   p_cons 9.247600e-01   p_joint 4.166667e-03

Joint ci ratio: 1.533236e-01	ci left: 3.756716e-03	ci right 4.386463e-03	k: 650	n:160000
Cons ci ratio: 2.791485e-03	ci left: 9.236545e-01	ci right 9.262426e-01	k: 147993	n:160000
KS ci ratio: 4.409242e-01	ci left: 3.853670e-04	ci right 6.083853e-04	k: 78	n:160000
PBXIP1   160000 perm   40 sec   (4038 perm/sec)   p_kst 4.875000e-04   p_cons 9.249563e-01   p_joint 4.062500e-03

Joint ci ratio: 1.489283e-01	ci left: 3.756470e-03	ci right 4.366516e-03	k: 689	n:170000
Cons ci ratio: 2.699583e-03	ci left: 9.241349e-01	ci right 9.266388e-01	k: 157317	n:170000
KS ci ratio: 4.250761e-01	ci left: 3.941461e-04	ci right 6.117153e-04	k: 84	n:170000
PBXIP1   170000 perm   43 sec   (3980 perm/sec)   p_kst 4.941176e-04   p_cons 9.253941e-01   p_joint 4.052941e-03

Joint ci ratio: 2.096287e-01	ci left: 1.735686e-03	ci right 2.147286e-03	k: 348	n:180000
Cons ci ratio: 2.628997e-03	ci left: 9.238799e-01	ci right 9.263175e-01	k: 166519	n:180000
KS ci ratio: 4.154153e-01	ci left: 3.921211e-04	ci right 6.022906e-04	k: 88	n:180000
PBXIP1   180000 perm   46 sec   (3925 perm/sec)   p_kst 4.888889e-04   p_cons 9.251056e-01   p_joint 1.933333e-03

Joint ci ratio: 1.890451e-01	ci left: 2.044456e-03	ci right 2.476218e-03	k: 428	n:190000
Cons ci ratio: 2.556936e-03	ci left: 9.240186e-01	ci right 9.263895e-01	k: 175790	n:190000
KS ci ratio: 3.999812e-01	ci left: 4.045481e-04	ci right 6.111901e-04	k: 95	n:190000
PBXIP1   190000 perm   49 sec   (3870 perm/sec)   p_kst 5.000000e-04   p_cons 9.252105e-01   p_joint 2.252632e-03

Joint ci ratio: 2.009001e-01	ci left: 1.709152e-03	ci right 2.095514e-03	k: 379	n:200000
Cons ci ratio: 2.493820e-03	ci left: 9.239578e-01	ci right 9.262698e-01	k: 185024	n:200000
KS ci ratio: 3.979182e-01	ci left: 3.888183e-04	ci right 5.861310e-04	k: 96	n:200000
PBXIP1   200000 perm   52 sec   (3816 perm/sec)   p_kst 4.800000e-04   p_cons 9.251200e-01   p_joint 1.895000e-03

Joint ci ratio: 1.958128e-01	ci left: 1.718273e-03	ci right 2.095688e-03	k: 399	n:210000
Cons ci ratio: 2.432813e-03	ci left: 9.240378e-01	ci right 9.262933e-01	k: 194286	n:210000
KS ci ratio: 3.899598e-01	ci left: 3.874638e-04	ci right 5.791454e-04	k: 100	n:210000
PBXIP1   210000 perm   56 sec   (3765 perm/sec)   p_kst 4.761905e-04   p_cons 9.251714e-01   p_joint 1.900000e-03

Joint ci ratio: 1.915508e-01	ci left: 1.718021e-03	ci right 2.086210e-03	k: 417	n:220000
Cons ci ratio: 2.379038e-03	ci left: 9.239373e-01	ci right 9.261424e-01	k: 203510	n:220000
KS ci ratio: 3.861578e-01	ci left: 3.780554e-04	ci right 5.627950e-04	k: 102	n:220000
PBXIP1   220000 perm   59 sec   (3714 perm/sec)   p_kst 4.636364e-04   p_cons 9.250455e-01   p_joint 1.895455e-03

Joint ci ratio: 1.899718e-01	ci left: 1.672301e-03	ci right 2.027397e-03	k: 424	n:230000
Cons ci ratio: 2.327286e-03	ci left: 9.239292e-01	ci right 9.260862e-01	k: 212753	n:230000
KS ci ratio: 3.824647e-01	ci left: 3.694733e-04	ci right 5.478582e-04	k: 104	n:230000
PBXIP1   230000 perm   63 sec   (3667 perm/sec)   p_kst 4.521739e-04   p_cons 9.250130e-01   p_joint 1.843478e-03

Joint ci ratio: 2.835278e-01	ci left: 6.831316e-04	ci right 9.125348e-04	k: 190	n:240000
Cons ci ratio: 2.279934e-03	ci left: 9.238509e-01	ci right 9.259638e-01	k: 221979	n:240000
KS ci ratio: 3.736709e-01	ci left: 3.729325e-04	ci right 5.478345e-04	k: 109	n:240000
PBXIP1   240000 perm   66 sec   (3619 perm/sec)   p_kst 4.541667e-04   p_cons 9.249125e-01   p_joint 7.916667e-04

Joint ci ratio: 2.784714e-01	ci left: 6.818334e-04	ci right 9.060015e-04	k: 197	n:250000
Cons ci ratio: 2.232332e-03	ci left: 9.239686e-01	ci right 9.260375e-01	k: 231252	n:250000
KS ci ratio: 3.703215e-01	ci left: 3.652670e-04	ci right 5.346663e-04	k: 111	n:250000
PBXIP1   250000 perm   70 sec   (3572 perm/sec)   p_kst 4.440000e-04   p_cons 9.250080e-01   p_joint 7.880000e-04

Joint ci ratio: 2.730106e-01	ci left: 6.842513e-04	ci right 9.040463e-04	k: 205	n:260000
Cons ci ratio: 2.187346e-03	ci left: 9.240931e-01	ci right 9.261205e-01	k: 240529	n:260000
KS ci ratio: 3.607827e-01	ci left: 3.721760e-04	ci right 5.392891e-04	k: 117	n:260000
PBXIP1   260000 perm   74 sec   (3526 perm/sec)   p_kst 4.500000e-04   p_cons 9.251115e-01   p_joint 7.884615e-04

Joint ci ratio: 2.697580e-01	ci left: 6.761668e-04	ci right 8.903392e-04	k: 210	n:270000
Cons ci ratio: 2.146578e-03	ci left: 9.241044e-01	ci right 9.260939e-01	k: 249778	n:270000
KS ci ratio: 3.592659e-01	ci left: 3.617601e-04	ci right 5.233534e-04	k: 118	n:270000
PBXIP1   270000 perm   78 sec   (3481 perm/sec)   p_kst 4.370370e-04   p_cons 9.251037e-01   p_joint 7.777778e-04

Joint ci ratio: 1.741074e-01	ci left: 1.649802e-03	ci right 1.967794e-03	k: 505	n:280000
Cons ci ratio: 2.106377e-03	ci left: 9.242230e-01	ci right 9.261753e-01	k: 259057	n:280000
KS ci ratio: 3.548222e-01	ci left: 3.585932e-04	ci right 5.163338e-04	k: 121	n:280000
PBXIP1   280000 perm   81 sec   (3438 perm/sec)   p_kst 4.321429e-04   p_cons 9.252036e-01   p_joint 1.803571e-03

Joint ci ratio: 1.704404e-01	ci left: 1.665505e-03	ci right 1.979068e-03	k: 527	n:290000
Cons ci ratio: 2.066182e-03	ci left: 9.244794e-01	ci right 9.263949e-01	k: 268378	n:290000
KS ci ratio: 3.464053e-01	ci left: 3.650960e-04	ci right 5.210332e-04	k: 127	n:290000
PBXIP1   290000 perm   86 sec   (3392 perm/sec)   p_kst 4.379310e-04   p_cons 9.254414e-01   p_joint 1.817241e-03

Joint ci ratio: 1.680707e-01	ci left: 1.657870e-03	ci right 1.965215e-03	k: 542	n:300000
Cons ci ratio: 2.030589e-03	ci left: 9.245546e-01	ci right 9.264372e-01	k: 277650	n:300000
KS ci ratio: 3.385602e-01	ci left: 3.712065e-04	ci right 5.253786e-04	k: 133	n:300000
PBXIP1   300000 perm   90 sec   (3347 perm/sec)   p_kst 4.433333e-04   p_cons 9.255000e-01   p_joint 1.806667e-03

Joint ci ratio: 1.657971e-01	ci left: 1.650755e-03	ci right 1.952229e-03	k: 557	n:310000
Cons ci ratio: 1.997148e-03	ci left: 9.245993e-01	ci right 9.264508e-01	k: 286914	n:310000
KS ci ratio: 3.373059e-01	ci left: 3.621839e-04	ci right 5.119299e-04	k: 134	n:310000
PBXIP1   310000 perm   94 sec   (3304 perm/sec)   p_kst 4.322581e-04   p_cons 9.255290e-01   p_joint 1.796774e-03

Joint ci ratio: 1.630443e-01	ci left: 1.656101e-03	ci right 1.953037e-03	k: 576	n:320000
Cons ci ratio: 1.963924e-03	ci left: 9.247388e-01	ci right 9.265598e-01	k: 296209	n:320000
KS ci ratio: 3.300503e-01	ci left: 3.680452e-04	ci right 5.162468e-04	k: 140	n:320000
PBXIP1   320000 perm   98 sec   (3264 perm/sec)   p_kst 4.375000e-04   p_cons 9.256531e-01   p_joint 1.800000e-03

Joint ci ratio: 1.612393e-01	ci left: 1.643711e-03	ci right 1.934847e-03	k: 589	n:330000
Cons ci ratio: 1.933960e-03	ci left: 9.247512e-01	ci right 9.265443e-01	k: 305465	n:330000
KS ci ratio: 3.288878e-01	ci left: 3.596718e-04	ci right 5.038835e-04	k: 141	n:330000
PBXIP1   330000 perm   102 sec   (3224 perm/sec)   p_kst 4.272727e-04   p_cons 9.256515e-01   p_joint 1.784848e-03

Joint ci ratio: 1.594929e-01	ci left: 1.632067e-03	ci right 1.917709e-03	k: 602	n:340000
Cons ci ratio: 1.905735e-03	ci left: 9.247335e-01	ci right 9.265004e-01	k: 314711	n:340000
KS ci ratio: 3.243514e-01	ci left: 3.598934e-04	ci right 5.017894e-04	k: 145	n:340000
PBXIP1   340000 perm   107 sec   (3185 perm/sec)   p_kst 4.264706e-04   p_cons 9.256206e-01   p_joint 1.770588e-03

Joint ci ratio: 1.569114e-01	ci left: 1.640317e-03	ci right 1.922320e-03	k: 622	n:350000
Cons ci ratio: 1.878164e-03	ci left: 9.247573e-01	ci right 9.264985e-01	k: 323971	n:350000
KS ci ratio: 3.210701e-01	ci left: 3.574878e-04	ci right 4.967160e-04	k: 148	n:350000
PBXIP1   350000 perm   111 sec   (3146 perm/sec)   p_kst 4.228571e-04   p_cons 9.256314e-01   p_joint 1.777143e-03

Joint ci ratio: 1.549349e-01	ci left: 1.637463e-03	ci right 1.915099e-03	k: 638	n:360000
Cons ci ratio: 1.851308e-03	ci left: 9.248134e-01	ci right 9.265298e-01	k: 333243	n:360000
KS ci ratio: 3.137827e-01	ci left: 3.654535e-04	ci right 5.039063e-04	k: 155	n:360000
PBXIP1   360000 perm   116 sec   (3109 perm/sec)   p_kst 4.305556e-04   p_cons 9.256750e-01   p_joint 1.772222e-03

Joint ci ratio: 2.308980e-01	ci left: 6.885511e-04	ci right 8.707653e-04	k: 287	n:370000
Cons ci ratio: 1.827293e-03	ci left: 9.247362e-01	ci right 9.264301e-01	k: 342467	n:370000
KS ci ratio: 3.098358e-01	ci left: 3.655413e-04	ci right 5.019412e-04	k: 159	n:370000
PBXIP1   370000 perm   120 sec   (3074 perm/sec)   p_kst 4.297297e-04   p_cons 9.255865e-01   p_joint 7.756757e-04

Joint ci ratio: 2.293122e-01	ci left: 6.803506e-04	ci right 8.589830e-04	k: 291	n:380000
Cons ci ratio: 1.804564e-03	ci left: 9.246341e-01	ci right 9.263068e-01	k: 351680	n:380000
KS ci ratio: 3.069718e-01	ci left: 3.632056e-04	ci right 4.972361e-04	k: 162	n:380000
PBXIP1   380000 perm   125 sec   (3029 perm/sec)   p_kst 4.263158e-04   p_cons 9.254737e-01   p_joint 7.657895e-04

Joint ci ratio: 2.254830e-01	ci left: 6.870865e-04	ci right 8.640565e-04	k: 301	n:390000
Cons ci ratio: 1.781468e-03	ci left: 9.246302e-01	ci right 9.262814e-01	k: 360929	n:390000
KS ci ratio: 3.005844e-01	ci left: 3.704738e-04	ci right 5.037986e-04	k: 169	n:390000
PBXIP1   390000 perm   130 sec   (2997 perm/sec)   p_kst 4.333333e-04   p_cons 9.254590e-01   p_joint 7.717949e-04

Joint ci ratio: 2.221961e-01	ci left: 6.911480e-04	ci right 8.662143e-04	k: 310	n:400000
Cons ci ratio: 1.760161e-03	ci left: 9.245538e-01	ci right 9.261850e-01	k: 370149	n:400000
KS ci ratio: 2.954157e-01	ci left: 3.750909e-04	ci right 5.073215e-04	k: 175	n:400000
PBXIP1   400000 perm   135 sec   (2966 perm/sec)   p_kst 4.375000e-04   p_cons 9.253725e-01   p_joint 7.750000e-04

Joint ci ratio: 2.204320e-01	ci left: 6.858097e-04	ci right 8.579575e-04	k: 315	n:410000
Cons ci ratio: 1.738830e-03	ci left: 9.245425e-01	ci right 9.261539e-01	k: 379394	n:410000
KS ci ratio: 2.913066e-01	ci left: 3.772402e-04	ci right 5.080377e-04	k: 180	n:410000
PBXIP1   410000 perm   140 sec   (2935 perm/sec)   p_kst 4.390244e-04   p_cons 9.253512e-01   p_joint 7.682927e-04

Joint ci ratio: 1.432975e-01	ci left: 1.651103e-03	ci right 1.908229e-03	k: 746	n:420000
Cons ci ratio: 1.717250e-03	ci left: 9.246132e-01	ci right 9.262047e-01	k: 388673	n:420000
KS ci ratio: 2.865946e-01	ci left: 3.815090e-04	ci right 5.112595e-04	k: 186	n:420000
PBXIP1   420000 perm   145 sec   (2905 perm/sec)   p_kst 4.428571e-04   p_cons 9.254119e-01   p_joint 1.776190e-03

Joint ci ratio: 1.416944e-01	ci left: 1.650831e-03	ci right 1.904795e-03	k: 763	n:430000
Cons ci ratio: 1.696367e-03	ci left: 9.246878e-01	ci right 9.262600e-01	k: 397955	n:430000
KS ci ratio: 2.843235e-01	ci left: 3.791139e-04	ci right 5.068447e-04	k: 189	n:430000
PBXIP1   430000 perm   150 sec   (2876 perm/sec)   p_kst 4.395349e-04   p_cons 9.254767e-01   p_joint 1.774419e-03

Joint ci ratio: 1.401439e-01	ci left: 1.650586e-03	ci right 1.901502e-03	k: 780	n:440000
Cons ci ratio: 1.677663e-03	ci left: 9.246403e-01	ci right 9.261950e-01	k: 407185	n:440000
KS ci ratio: 2.799373e-01	ci left: 3.831695e-04	ci right 5.099240e-04	k: 195	n:440000
PBXIP1   440000 perm   155 sec   (2848 perm/sec)   p_kst 4.431818e-04   p_cons 9.254205e-01   p_joint 1.772727e-03

Joint ci ratio: 1.387304e-01	ci left: 1.648222e-03	ci right 1.896042e-03	k: 796	n:450000
Cons ci ratio: 1.658575e-03	ci left: 9.246776e-01	ci right 9.262147e-01	k: 416452	n:450000
KS ci ratio: 2.771239e-01	ci left: 3.829227e-04	ci right 5.081005e-04	k: 199	n:450000
PBXIP1   450000 perm   160 sec   (2819 perm/sec)   p_kst 4.422222e-04   p_cons 9.254489e-01   p_joint 1.768889e-03

Joint ci ratio: 1.376985e-01	ci left: 1.637575e-03	ci right 1.881813e-03	k: 808	n:460000
Cons ci ratio: 1.640590e-03	ci left: 9.246741e-01	ci right 9.261945e-01	k: 425701	n:460000
KS ci ratio: 2.750690e-01	ci left: 3.806685e-04	ci right 5.040270e-04	k: 202	n:460000
PBXIP1   460000 perm   165 sec   (2791 perm/sec)   p_kst 4.391304e-04   p_cons 9.254370e-01   p_joint 1.756522e-03

Joint ci ratio: 1.360270e-01	ci left: 1.643830e-03	ci right 1.885783e-03	k: 828	n:470000
Cons ci ratio: 1.622401e-03	ci left: 9.247371e-01	ci right 9.262407e-01	k: 434981	n:470000
KS ci ratio: 2.730592e-01	ci left: 3.785135e-04	ci right 5.001236e-04	k: 205	n:470000
PBXIP1   470000 perm   170 sec   (2763 perm/sec)   p_kst 4.361702e-04   p_cons 9.254915e-01   p_joint 1.761702e-03

Joint ci ratio: 1.345738e-01	ci left: 1.645814e-03	ci right 1.885264e-03	k: 846	n:480000
Cons ci ratio: 1.603930e-03	ci left: 9.248728e-01	ci right 9.263595e-01	k: 444297	n:480000
KS ci ratio: 2.691670e-01	ci left: 3.822783e-04	ci right 5.030518e-04	k: 211	n:480000
PBXIP1   480000 perm   175 sec   (2737 perm/sec)   p_kst 4.395833e-04   p_cons 9.256188e-01   p_joint 1.762500e-03

Joint ci ratio: 1.321749e-01	ci left: 1.673382e-03	ci right 1.912163e-03	k: 877	n:490000
Cons ci ratio: 1.587083e-03	ci left: 9.249150e-01	ci right 9.263861e-01	k: 453570	n:490000
KS ci ratio: 2.630333e-01	ci left: 3.935241e-04	ci right 5.145512e-04	k: 221	n:490000
PBXIP1   490000 perm   181 sec   (2711 perm/sec)   p_kst 4.510204e-04   p_cons 9.256531e-01   p_joint 1.789796e-03

Joint ci ratio: 1.304763e-01	ci left: 1.684404e-03	ci right 1.921429e-03	k: 900	n:500000
Cons ci ratio: 1.571692e-03	ci left: 9.248732e-01	ci right 9.263299e-01	k: 462802	n:500000
KS ci ratio: 2.601202e-01	ci left: 3.949980e-04	ci right 5.149144e-04	k: 226	n:500000
PBXIP1   500000 perm   186 sec   (2685 perm/sec)   p_kst 4.520000e-04   p_cons 9.256040e-01   p_joint 1.800000e-03

Joint ci ratio: 1.291922e-01	ci left: 1.685524e-03	ci right 1.920194e-03	k: 918	n:510000
Cons ci ratio: 1.556008e-03	ci left: 9.248981e-01	ci right 9.263402e-01	k: 472067	n:510000
KS ci ratio: 2.567488e-01	ci left: 3.982557e-04	ci right 5.173430e-04	k: 232	n:510000
PBXIP1   510000 perm   192 sec   (2660 perm/sec)   p_kst 4.549020e-04   p_cons 9.256216e-01   p_joint 1.800000e-03

Joint ci ratio: 1.282197e-01	ci left: 1.679166e-03	ci right 1.911057e-03	k: 932	n:520000
Cons ci ratio: 1.541494e-03	ci left: 9.248583e-01	ci right 9.262870e-01	k: 481299	n:520000
KS ci ratio: 2.540375e-01	ci left: 3.995969e-04	ci right 5.176236e-04	k: 237	n:520000
PBXIP1   520000 perm   197 sec   (2635 perm/sec)   p_kst 4.557692e-04   p_cons 9.255750e-01   p_joint 1.792308e-03

Joint ci ratio: 1.263368e-01	ci left: 1.698633e-03	ci right 1.929509e-03	k: 960	n:530000
Cons ci ratio: 1.526584e-03	ci left: 9.248921e-01	ci right 9.263070e-01	k: 490569	n:530000
KS ci ratio: 2.508943e-01	ci left: 4.026620e-04	ci right 5.198925e-04	k: 243	n:530000
PBXIP1   530000 perm   203 sec   (2610 perm/sec)   p_kst 4.584906e-04   p_cons 9.256019e-01   p_joint 1.811321e-03

Joint ci ratio: 1.256207e-01	ci left: 1.686904e-03	ci right 1.914790e-03	k: 971	n:540000
Cons ci ratio: 1.512648e-03	ci left: 9.248745e-01	ci right 9.262764e-01	k: 499812	n:540000
KS ci ratio: 2.503826e-01	ci left: 3.969406e-04	ci right 5.122330e-04	k: 244	n:540000
PBXIP1   540000 perm   209 sec   (2586 perm/sec)   p_kst 4.518519e-04   p_cons 9.255778e-01   p_joint 1.798148e-03

Joint ci ratio: 1.244106e-01	ci left: 1.689699e-03	ci right 1.915601e-03	k: 990	n:550000
Cons ci ratio: 1.498789e-03	ci left: 9.248851e-01	ci right 9.262741e-01	k: 509070	n:550000
KS ci ratio: 2.478660e-01	ci left: 3.982470e-04	ci right 5.125770e-04	k: 249	n:550000
PBXIP1   550000 perm   215 sec   (2562 perm/sec)   p_kst 4.527273e-04   p_cons 9.255818e-01   p_joint 1.800000e-03

Joint ci ratio: 1.228696e-01	ci left: 1.702788e-03	ci right 1.927416e-03	k: 1015	n:560000
Cons ci ratio: 1.484207e-03	ci left: 9.249975e-01	ci right 9.263731e-01	k: 518385	n:560000
KS ci ratio: 2.449438e-01	ci left: 4.011882e-04	ci right 5.147982e-04	k: 255	n:560000
PBXIP1   560000 perm   221 sec   (2539 perm/sec)   p_kst 4.553571e-04   p_cons 9.256875e-01   p_joint 1.812500e-03

Joint ci ratio: 1.216189e-01	ci left: 1.708631e-03	ci right 1.931569e-03	k: 1036	n:570000
Cons ci ratio: 1.469814e-03	ci left: 9.251271e-01	ci right 9.264896e-01	k: 527712	n:570000
KS ci ratio: 2.425861e-01	ci left: 4.023860e-04	ci right 5.150733e-04	k: 260	n:570000
PBXIP1   570000 perm   227 sec   (2514 perm/sec)   p_kst 4.561404e-04   p_cons 9.258105e-01   p_joint 1.817544e-03

Joint ci ratio: 1.204626e-01	ci left: 1.712610e-03	ci right 1.933793e-03	k: 1056	n:580000
Cons ci ratio: 1.457291e-03	ci left: 9.251138e-01	ci right 9.264647e-01	k: 536959	n:580000
KS ci ratio: 2.407485e-01	ci left: 4.019273e-04	ci right 5.135061e-04	k: 264	n:580000
PBXIP1   580000 perm   233 sec   (2492 perm/sec)   p_kst 4.551724e-04   p_cons 9.257914e-01   p_joint 1.820690e-03

Joint ci ratio: 1.200103e-01	ci left: 1.696734e-03	ci right 1.914984e-03	k: 1064	n:590000
Cons ci ratio: 1.444298e-03	ci left: 9.251759e-01	ci right 9.265148e-01	k: 546250	n:590000
KS ci ratio: 2.402962e-01	ci left: 3.967076e-04	ci right 5.065997e-04	k: 265	n:590000
PBXIP1   590000 perm   239 sec   (2470 perm/sec)   p_kst 4.491525e-04   p_cons 9.258475e-01   p_joint 1.803390e-03

Joint ci ratio: 1.188989e-01	ci left: 1.700792e-03	ci right 1.917397e-03	k: 1084	n:600000
Cons ci ratio: 1.431855e-03	ci left: 9.252159e-01	ci right 9.265433e-01	k: 555529	n:600000
KS ci ratio: 2.389528e-01	ci left: 3.947956e-04	ci right 5.034561e-04	k: 268	n:600000
PBXIP1   600000 perm   245 sec   (2449 perm/sec)   p_kst 4.466667e-04   p_cons 9.258817e-01   p_joint 1.806667e-03

Joint ci ratio: 1.175516e-01	ci left: 1.712683e-03	ci right 1.928158e-03	k: 1109	n:610000
Cons ci ratio: 1.419473e-03	ci left: 9.252793e-01	ci right 9.265953e-01	k: 564823	n:610000
KS ci ratio: 2.367625e-01	ci left: 3.960318e-04	ci right 5.038869e-04	k: 273	n:610000
PBXIP1   610000 perm   251 sec   (2427 perm/sec)   p_kst 4.475410e-04   p_cons 9.259393e-01   p_joint 1.818033e-03

Joint ci ratio: 1.163519e-01	ci left: 1.721071e-03	ci right 1.935240e-03	k: 1132	n:620000
Cons ci ratio: 1.407604e-03	ci left: 9.253213e-01	ci right 9.266263e-01	k: 574105	n:620000
KS ci ratio: 2.329664e-01	ci left: 4.033064e-04	ci right 5.111282e-04	k: 282	n:620000
PBXIP1   620000 perm   258 sec   (2407 perm/sec)   p_kst 4.548387e-04   p_cons 9.259758e-01   p_joint 1.825806e-03

Joint ci ratio: 1.156401e-01	ci left: 1.715329e-03	ci right 1.927389e-03	k: 1146	n:630000
Cons ci ratio: 1.396400e-03	ci left: 9.253254e-01	ci right 9.266199e-01	k: 583364	n:630000
KS ci ratio: 2.329673e-01	ci left: 3.969046e-04	ci right 5.030153e-04	k: 282	n:630000
PBXIP1   630000 perm   264 sec   (2387 perm/sec)   p_kst 4.476190e-04   p_cons 9.259746e-01   p_joint 1.819048e-03

Joint ci ratio: 1.148420e-01	ci left: 1.712807e-03	ci right 1.922994e-03	k: 1162	n:640000
Cons ci ratio: 1.384670e-03	ci left: 9.254077e-01	ci right 9.266915e-01	k: 592673	n:640000
KS ci ratio: 2.313382e-01	ci left: 3.965895e-04	ci right 5.017685e-04	k: 286	n:640000
PBXIP1   640000 perm   270 sec   (2367 perm/sec)   p_kst 4.468750e-04   p_cons 9.260516e-01   p_joint 1.815625e-03

Joint ci ratio: 1.137707e-01	ci left: 1.719334e-03	ci right 1.928222e-03	k: 1184	n:650000
Cons ci ratio: 1.374587e-03	ci left: 9.253517e-01	ci right 9.266261e-01	k: 601894	n:650000
KS ci ratio: 2.297428e-01	ci left: 3.962865e-04	ci right 5.005576e-04	k: 290	n:650000
PBXIP1   650000 perm   277 sec   (2347 perm/sec)   p_kst 4.461538e-04   p_cons 9.259908e-01   p_joint 1.821538e-03

Joint ci ratio: 1.132469e-01	ci left: 1.709477e-03	ci right 1.916147e-03	k: 1195	n:660000
Cons ci ratio: 1.363498e-03	ci left: 9.254206e-01	ci right 9.266848e-01	k: 611196	n:660000
KS ci ratio: 2.297436e-01	ci left: 3.902821e-04	ci right 4.929736e-04	k: 290	n:660000
PBXIP1   660000 perm   284 sec   (2326 perm/sec)   p_kst 4.393939e-04   p_cons 9.260545e-01   p_joint 1.810606e-03

Joint ci ratio: 1.125902e-01	ci left: 1.704267e-03	ci right 1.909034e-03	k: 1209	n:670000
Cons ci ratio: 1.353013e-03	ci left: 9.254530e-01	ci right 9.267075e-01	k: 620475	n:670000
KS ci ratio: 2.281808e-01	ci left: 3.900847e-04	ci right 4.919278e-04	k: 294	n:670000
PBXIP1   670000 perm   290 sec   (2307 perm/sec)   p_kst 4.388060e-04   p_cons 9.260821e-01   p_joint 1.804478e-03

Joint ci ratio: 1.120825e-01	ci left: 1.694926e-03	ci right 1.897591e-03	k: 1220	n:680000
Cons ci ratio: 1.342765e-03	ci left: 9.254845e-01	ci right 9.267295e-01	k: 629754	n:680000
KS ci ratio: 2.277956e-01	ci left: 3.857346e-04	ci right 4.862482e-04	k: 295	n:680000
PBXIP1   680000 perm   297 sec   (2288 perm/sec)   p_kst 4.338235e-04   p_cons 9.261088e-01   p_joint 1.794118e-03

Joint ci ratio: 1.110411e-01	ci left: 1.702766e-03	ci right 1.904352e-03	k: 1243	n:690000
Cons ci ratio: 1.332365e-03	ci left: 9.255544e-01	ci right 9.267898e-01	k: 639060	n:690000
KS ci ratio: 2.255211e-01	ci left: 3.883463e-04	ci right 4.883896e-04	k: 301	n:690000
PBXIP1   690000 perm   304 sec   (2268 perm/sec)   p_kst 4.362319e-04   p_cons 9.261739e-01   p_joint 1.801449e-03

Joint ci ratio: 1.104218e-01	ci left: 1.697886e-03	ci right 1.897701e-03	k: 1257	n:700000
Cons ci ratio: 1.323045e-03	ci left: 9.255349e-01	ci right 9.267616e-01	k: 648305	n:700000
KS ci ratio: 2.236770e-01	ci left: 3.895395e-04	ci right 4.889566e-04	k: 306	n:700000
PBXIP1   700000 perm   311 sec   (2249 perm/sec)   p_kst 4.371429e-04   p_cons 9.261500e-01   p_joint 1.795714e-03

Joint ci ratio: 1.097695e-01	ci left: 1.694517e-03	ci right 1.892682e-03	k: 1272	n:710000
Cons ci ratio: 1.313322e-03	ci left: 9.255781e-01	ci right 9.267959e-01	k: 657594	n:710000
KS ci ratio: 2.233141e-01	ci left: 3.853826e-04	ci right 4.835572e-04	k: 307	n:710000
PBXIP1   710000 perm   318 sec   (2231 perm/sec)   p_kst 4.323944e-04   p_cons 9.261887e-01   p_joint 1.791549e-03

Joint ci ratio: 1.089593e-01	ci left: 1.696649e-03	ci right 1.893505e-03	k: 1291	n:720000
Cons ci ratio: 1.304248e-03	ci left: 9.255742e-01	ci right 9.267835e-01	k: 666850	n:720000
KS ci ratio: 2.225929e-01	ci left: 3.826526e-04	ci right 4.797738e-04	k: 309	n:720000
PBXIP1   720000 perm   326 sec   (2211 perm/sec)   p_kst 4.291667e-04   p_cons 9.261806e-01   p_joint 1.793056e-03

Joint ci ratio: 1.082082e-01	ci left: 1.697395e-03	ci right 1.892893e-03	k: 1309	n:730000
Cons ci ratio: 1.295385e-03	ci left: 9.255676e-01	ci right 9.267687e-01	k: 676104	n:730000
KS ci ratio: 2.208192e-01	ci left: 3.838798e-04	ci right 4.804306e-04	k: 314	n:730000
PBXIP1   730000 perm   333 sec   (2192 perm/sec)   p_kst 4.301370e-04   p_cons 9.261699e-01   p_joint 1.793151e-03

Joint ci ratio: 1.075129e-01	ci left: 1.696811e-03	ci right 1.890906e-03	k: 1326	n:740000
Cons ci ratio: 1.286815e-03	ci left: 9.255491e-01	ci right 9.267422e-01	k: 685349	n:740000
KS ci ratio: 2.201218e-01	ci left: 3.812457e-04	ci right 4.767901e-04	k: 316	n:740000
PBXIP1   740000 perm   341 sec   (2171 perm/sec)   p_kst 4.270270e-04   p_cons 9.261473e-01   p_joint 1.791892e-03

Joint ci ratio: 1.064743e-01	ci left: 1.707926e-03	ci right 1.901288e-03	k: 1352	n:750000
Cons ci ratio: 1.278014e-03	ci left: 9.255739e-01	ci right 9.267588e-01	k: 694626	n:750000
KS ci ratio: 2.170614e-01	ci left: 3.875056e-04	ci right 4.830886e-04	k: 325	n:750000
PBXIP1   750000 perm   348 sec   (2153 perm/sec)   p_kst 4.333333e-04   p_cons 9.261680e-01   p_joint 1.802667e-03

Joint ci ratio: 1.055803e-01	ci left: 1.714914e-03	ci right 1.907336e-03	k: 1375	n:760000
Cons ci ratio: 1.269904e-03	ci left: 9.255426e-01	ci right 9.267200e-01	k: 703861	n:760000
KS ci ratio: 2.150908e-01	ci left: 3.898744e-04	ci right 4.850535e-04	k: 331	n:760000
PBXIP1   760000 perm   356 sec   (2135 perm/sec)   p_kst 4.355263e-04   p_cons 9.261329e-01   p_joint 1.809211e-03

Joint ci ratio: 1.049342e-01	ci left: 1.714140e-03	ci right 1.905224e-03	k: 1392	n:770000
Cons ci ratio: 1.261778e-03	ci left: 9.255304e-01	ci right 9.267002e-01	k: 713110	n:770000
KS ci ratio: 2.141257e-01	ci left: 3.884978e-04	ci right 4.828593e-04	k: 334	n:770000
PBXIP1   770000 perm   364 sec   (2118 perm/sec)   p_kst 4.337662e-04   p_cons 9.261169e-01   p_joint 1.807792e-03

Joint ci ratio: 1.042257e-01	ci left: 1.715885e-03	ci right 1.905794e-03	k: 1411	n:780000
Cons ci ratio: 1.253290e-03	ci left: 9.255751e-01	ci right 9.267371e-01	k: 722403	n:780000
KS ci ratio: 2.116134e-01	ci left: 3.932268e-04	ci right 4.874710e-04	k: 342	n:780000
PBXIP1   780000 perm   371 sec   (2101 perm/sec)   p_kst 4.384615e-04   p_cons 9.261577e-01   p_joint 1.808974e-03

Joint ci ratio: 1.036040e-01	ci left: 1.715125e-03	ci right 1.903748e-03	k: 1428	n:790000
Cons ci ratio: 1.245742e-03	ci left: 9.255336e-01	ci right 9.266886e-01	k: 731629	n:790000
KS ci ratio: 2.113061e-01	ci left: 3.894480e-04	ci right 4.826334e-04	k: 343	n:790000
PBXIP1   790000 perm   379 sec   (2084 perm/sec)   p_kst 4.341772e-04   p_cons 9.261127e-01   p_joint 1.807595e-03

Joint ci ratio: 1.028508e-01	ci left: 1.719258e-03	ci right 1.906878e-03	k: 1449	n:800000
Cons ci ratio: 1.237730e-03	ci left: 9.255597e-01	ci right 9.267072e-01	k: 740908	n:800000
KS ci ratio: 2.091881e-01	ci left: 3.928692e-04	ci right 4.858104e-04	k: 350	n:800000
PBXIP1   800000 perm   387 sec   (2066 perm/sec)   p_kst 4.375000e-04   p_cons 9.261350e-01   p_joint 1.811250e-03

Joint ci ratio: 1.021487e-01	ci left: 1.722091e-03	ci right 1.908661e-03	k: 1469	n:810000
Cons ci ratio: 1.229881e-03	ci left: 9.255839e-01	ci right 9.267242e-01	k: 750186	n:810000
KS ci ratio: 2.074225e-01	ci left: 3.950401e-04	ci right 4.876059e-04	k: 356	n:810000
PBXIP1   810000 perm   395 sec   (2049 perm/sec)   p_kst 4.395062e-04   p_cons 9.261556e-01   p_joint 1.813580e-03

Joint ci ratio: 1.013245e-01	ci left: 1.729614e-03	ci right 1.915397e-03	k: 1493	n:820000
Cons ci ratio: 1.221994e-03	ci left: 9.256283e-01	ci right 9.267613e-01	k: 759481	n:820000
KS ci ratio: 2.059850e-01	ci left: 3.960045e-04	ci right 4.880722e-04	k: 361	n:820000
PBXIP1   820000 perm   403 sec   (2033 perm/sec)   p_kst 4.402439e-04   p_cons 9.261963e-01   p_joint 1.820732e-03

Joint ci ratio: 1.004868e-01	ci left: 1.738136e-03	ci right 1.923200e-03	k: 1518	n:830000
Cons ci ratio: 1.214867e-03	ci left: 9.256028e-01	ci right 9.267292e-01	k: 768719	n:830000
KS ci ratio: 2.031969e-01	ci left: 4.026645e-04	ci right 4.948562e-04	k: 371	n:830000
PBXIP1   830000 perm   411 sec   (2018 perm/sec)   p_kst 4.469880e-04   p_cons 9.261675e-01   p_joint 1.828916e-03

Joint ci ratio: 9.983166e-02	ci left: 1.740657e-03	ci right 1.924710e-03	k: 1538	n:840000
Cons ci ratio: 1.207883e-03	ci left: 9.255755e-01	ci right 9.266953e-01	k: 777955	n:840000
KS ci ratio: 2.018448e-01	ci left: 4.035214e-04	ci right 4.952188e-04	k: 376	n:840000
PBXIP1   840000 perm   420 sec   (2002 perm/sec)   p_kst 4.476190e-04   p_cons 9.261369e-01   p_joint 1.830952e-03

Joint ci ratio: 9.928489e-02	ci left: 1.739681e-03	ci right 1.922564e-03	k: 1555	n:850000
Cons ci ratio: 1.200658e-03	ci left: 9.255902e-01	ci right 9.267034e-01	k: 787226	n:850000
KS ci ratio: 2.010467e-01	ci left: 4.021255e-04	ci right 4.931000e-04	k: 379	n:850000
PBXIP1   850000 perm   428 sec   (1987 perm/sec)   p_kst 4.458824e-04   p_cons 9.261482e-01   p_joint 1.829412e-03

Joint ci ratio: 9.862146e-02	ci left: 1.743267e-03	ci right 1.925231e-03	k: 1576	n:860000
Cons ci ratio: 1.193793e-03	ci left: 9.255777e-01	ci right 9.266845e-01	k: 796474	n:860000
KS ci ratio: 1.992198e-01	ci left: 4.051813e-04	ci right 4.959131e-04	k: 386	n:860000
PBXIP1   860000 perm   436 sec   (1973 perm/sec)   p_kst 4.488372e-04   p_cons 9.261326e-01   p_joint 1.832558e-03

Joint ci ratio: 9.794046e-02	ci left: 1.747895e-03	ci right 1.929011e-03	k: 1598	n:870000
Cons ci ratio: 1.186936e-03	ci left: 9.255783e-01	ci right 9.266787e-01	k: 805733	n:870000
KS ci ratio: 1.979452e-01	ci left: 4.059855e-04	ci right 4.962454e-04	k: 391	n:870000
PBXIP1   870000 perm   444 sec   (1958 perm/sec)   p_kst 4.494253e-04   p_cons 9.261299e-01   p_joint 1.836782e-03

Joint ci ratio: 9.748447e-02	ci left: 1.744661e-03	ci right 1.924552e-03	k: 1613	n:880000
Cons ci ratio: 1.180303e-03	ci left: 9.255663e-01	ci right 9.266605e-01	k: 814981	n:880000
KS ci ratio: 1.962009e-01	ci left: 4.089341e-04	ci right 4.989527e-04	k: 398	n:880000
PBXIP1   880000 perm   453 sec   (1944 perm/sec)   p_kst 4.522727e-04   p_cons 9.261148e-01   p_joint 1.832955e-03

Joint ci ratio: 9.667870e-02	ci left: 1.754659e-03	ci right 1.934001e-03	k: 1640	n:890000
Cons ci ratio: 1.256059e-03	ci left: 9.156968e-01	ci right 9.168488e-01	k: 815484	n:890000
KS ci ratio: 1.949829e-01	ci left: 4.096823e-04	ci right 4.992392e-04	k: 403	n:890000
PBXIP1   890000 perm   461 sec   (1929 perm/sec)   p_kst 4.528090e-04   p_cons 9.162742e-01   p_joint 1.842697e-03

Joint ci ratio: 9.600798e-02	ci left: 1.760103e-03	ci right 1.938683e-03	k: 1663	n:900000
Cons ci ratio: 1.248896e-03	ci left: 9.157204e-01	ci right 9.168658e-01	k: 824665	n:900000
KS ci ratio: 1.930802e-01	ci left: 4.135874e-04	ci right 5.030122e-04	k: 411	n:900000
PBXIP1   900000 perm   470 sec   (1916 perm/sec)   p_kst 4.566667e-04   p_cons 9.162944e-01   p_joint 1.847778e-03

Joint ci ratio: 9.557834e-02	ci left: 1.756850e-03	ci right 1.934257e-03	k: 1678	n:910000
Cons ci ratio: 1.242121e-03	ci left: 9.157104e-01	ci right 9.168496e-01	k: 833816	n:910000
KS ci ratio: 1.919191e-01	ci left: 4.142722e-04	ci right 5.032435e-04	k: 416	n:910000
PBXIP1   910000 perm   478 sec   (1903 perm/sec)   p_kst 4.571429e-04   p_cons 9.162813e-01   p_joint 1.843956e-03

Joint ci ratio: 9.504206e-02	ci left: 1.757914e-03	ci right 1.934377e-03	k: 1697	n:920000
Cons ci ratio: 1.235456e-03	ci left: 9.157006e-01	ci right 9.168337e-01	k: 842967	n:920000
KS ci ratio: 1.912326e-01	ci left: 4.128737e-04	ci right 5.011906e-04	k: 419	n:920000
PBXIP1   920000 perm   487 sec   (1890 perm/sec)   p_kst 4.554348e-04   p_cons 9.162685e-01   p_joint 1.844565e-03

Joint ci ratio: 9.462520e-02	ci left: 1.754758e-03	ci right 1.930089e-03	k: 1712	n:930000
Cons ci ratio: 1.228655e-03	ci left: 9.157213e-01	ci right 9.168481e-01	k: 852146	n:930000
KS ci ratio: 1.905535e-01	ci left: 4.115058e-04	ci right 4.991813e-04	k: 422	n:930000
PBXIP1   930000 perm   496 sec   (1876 perm/sec)   p_kst 4.537634e-04   p_cons 9.162860e-01   p_joint 1.840860e-03

Joint ci ratio: 9.405034e-02	ci left: 1.757904e-03	ci right 1.932423e-03	k: 1733	n:940000
Cons ci ratio: 1.221804e-03	ci left: 9.157618e-01	ci right 9.168824e-01	k: 861344	n:940000
KS ci ratio: 1.896589e-01	ci left: 4.111809e-04	ci right 4.983285e-04	k: 426	n:940000
PBXIP1   940000 perm   505 sec   (1863 perm/sec)   p_kst 4.531915e-04   p_cons 9.163234e-01   p_joint 1.843617e-03

Joint ci ratio: 1.413936e-01	ci left: 7.512549e-04	ci right 8.665606e-04	k: 767	n:950000
Cons ci ratio: 1.215834e-03	ci left: 9.157044e-01	ci right 9.168194e-01	k: 870450	n:950000
KS ci ratio: 1.876908e-01	ci left: 4.158790e-04	ci right 5.030034e-04	k: 435	n:950000
PBXIP1   950000 perm   514 sec   (1850 perm/sec)   p_kst 4.578947e-04   p_cons 9.162632e-01   p_joint 8.073684e-04

Joint ci ratio: 9.295758e-02	ci left: 1.762990e-03	ci right 1.935871e-03	k: 1774	n:960000
Cons ci ratio: 1.209375e-03	ci left: 9.157213e-01	ci right 9.168304e-01	k: 879626	n:960000
KS ci ratio: 1.868357e-01	ci left: 4.155183e-04	ci right 5.021256e-04	k: 439	n:960000
PBXIP1   960000 perm   523 sec   (1837 perm/sec)   p_kst 4.572917e-04   p_cons 9.162771e-01   p_joint 1.847917e-03

Joint ci ratio: 9.241240e-02	ci left: 1.765963e-03	ci right 1.938064e-03	k: 1795	n:970000
Cons ci ratio: 1.203471e-03	ci left: 9.156799e-01	ci right 9.167836e-01	k: 888746	n:970000
KS ci ratio: 1.857831e-01	ci left: 4.161488e-04	ci right 5.023438e-04	k: 444	n:970000
PBXIP1   970000 perm   532 sec   (1824 perm/sec)   p_kst 4.577320e-04   p_cons 9.162330e-01   p_joint 1.850515e-03

Joint ci ratio: 9.185138e-02	ci left: 1.769875e-03	ci right 1.941254e-03	k: 1817	n:980000
Cons ci ratio: 1.196609e-03	ci left: 9.157735e-01	ci right 9.168710e-01	k: 897997	n:980000
KS ci ratio: 1.847480e-01	ci left: 4.167678e-04	ci right 5.025562e-04	k: 449	n:980000
PBXIP1   980000 perm   541 sec   (1812 perm/sec)   p_kst 4.581633e-04   p_cons 9.163235e-01   p_joint 1.854082e-03

Joint ci ratio: 9.120120e-02	ci left: 1.777659e-03	ci right 1.948509e-03	k: 1843	n:990000
Cons ci ratio: 1.190544e-03	ci left: 9.157771e-01	ci right 9.168690e-01	k: 907161	n:990000
KS ci ratio: 1.833274e-01	ci left: 4.193031e-04	ci right 5.048759e-04	k: 456	n:990000
PBXIP1   990000 perm   550 sec   (1800 perm/sec)   p_kst 4.606061e-04   p_cons 9.163242e-01   p_joint 1.861616e-03

Joint ci ratio: 9.054038e-02	ci left: 1.786269e-03	ci right 1.956637e-03	k: 1870	n:1000000
Cons ci ratio: 1.184825e-03	ci left: 9.157475e-01	ci right 9.168341e-01	k: 916292	n:1000000
KS ci ratio: 1.821356e-01	ci left: 4.208356e-04	ci right 5.061013e-04	k: 462	n:1000000
PBXIP1   1000000 perm   559 sec   (1789 perm/sec)   p_kst 4.620000e-04   p_cons 9.162920e-01   p_joint 1.870000e-03

Joint ci ratio: 8.991744e-02	ci left: 1.793746e-03	ci right 1.963587e-03	k: 1896	n:1010000
Cons ci ratio: 1.179158e-03	ci left: 9.157225e-01	ci right 9.168039e-01	k: 925427	n:1010000
KS ci ratio: 1.809667e-01	ci left: 4.223396e-04	ci right 5.073006e-04	k: 468	n:1010000
PBXIP1   1010000 perm   568 sec   (1777 perm/sec)   p_kst 4.633663e-04   p_cons 9.162644e-01   p_joint 1.877228e-03

Joint ci ratio: 8.968177e-02	ci left: 1.785743e-03	ci right 1.954360e-03	k: 1906	n:1020000
Cons ci ratio: 1.173360e-03	ci left: 9.157255e-01	ci right 9.168016e-01	k: 934590	n:1020000
KS ci ratio: 1.809671e-01	ci left: 4.181989e-04	ci right 5.023272e-04	k: 468	n:1020000
PBXIP1   1020000 perm   578 sec   (1766 perm/sec)   p_kst 4.588235e-04   p_cons 9.162647e-01   p_joint 1.868627e-03

Joint ci ratio: 8.926152e-02	ci left: 1.785491e-03	ci right 1.953253e-03	k: 1924	n:1030000
Cons ci ratio: 1.167581e-03	ci left: 9.157372e-01	ci right 9.168080e-01	k: 943762	n:1030000
KS ci ratio: 1.802003e-01	ci left: 4.178467e-04	ci right 5.015091e-04	k: 472	n:1030000
PBXIP1   1030000 perm   587 sec   (1754 perm/sec)   p_kst 4.582524e-04   p_cons 9.162738e-01   p_joint 1.867961e-03

Joint ci ratio: 8.875564e-02	ci left: 1.789006e-03	ci right 1.956096e-03	k: 1946	n:1040000
Cons ci ratio: 1.161887e-03	ci left: 9.157488e-01	ci right 9.168143e-01	k: 952934	n:1040000
KS ci ratio: 1.794432e-01	ci left: 4.175020e-04	ci right 5.007060e-04	k: 476	n:1040000
PBXIP1   1040000 perm   596 sec   (1744 perm/sec)   p_kst 4.576923e-04   p_cons 9.162827e-01   p_joint 1.871154e-03

Joint ci ratio: 8.846105e-02	ci left: 1.784074e-03	ci right 1.950122e-03	k: 1959	n:1050000
Cons ci ratio: 1.156412e-03	ci left: 9.157419e-01	ci right 9.168024e-01	k: 962087	n:1050000
KS ci ratio: 1.786956e-01	ci left: 4.171645e-04	ci right 4.999174e-04	k: 480	n:1050000
PBXIP1   1050000 perm   606 sec   (1732 perm/sec)   p_kst 4.571429e-04   p_cons 9.162733e-01   p_joint 1.865714e-03

Joint ci ratio: 8.796859e-02	ci left: 1.787540e-03	ci right 1.952937e-03	k: 1981	n:1060000
Cons ci ratio: 1.150970e-03	ci left: 9.157409e-01	ci right 9.167964e-01	k: 971246	n:1060000
KS ci ratio: 1.775913e-01	ci left: 4.186370e-04	ci right 5.011137e-04	k: 486	n:1060000
PBXIP1   1060000 perm   616 sec   (1721 perm/sec)   p_kst 4.584906e-04   p_cons 9.162698e-01   p_joint 1.868868e-03

Joint ci ratio: 8.752803e-02	ci left: 1.789115e-03	ci right 1.953787e-03	k: 2001	n:1070000
Cons ci ratio: 1.145745e-03	ci left: 9.157212e-01	ci right 9.167719e-01	k: 980385	n:1070000
KS ci ratio: 1.768664e-01	ci left: 4.182970e-04	ci right 5.003344e-04	k: 490	n:1070000
PBXIP1   1070000 perm   625 sec   (1711 perm/sec)   p_kst 4.579439e-04   p_cons 9.162477e-01   p_joint 1.870093e-03

Joint ci ratio: 8.713721e-02	ci left: 1.788852e-03	ci right 1.952727e-03	k: 2019	n:1080000
Cons ci ratio: 1.140245e-03	ci left: 9.157483e-01	ci right 9.167939e-01	k: 989574	n:1080000
KS ci ratio: 1.756188e-01	ci left: 4.206195e-04	ci right 5.024687e-04	k: 497	n:1080000
PBXIP1   1080000 perm   635 sec   (1700 perm/sec)   p_kst 4.601852e-04   p_cons 9.162722e-01   p_joint 1.869444e-03

Joint ci ratio: 8.677291e-02	ci left: 1.787698e-03	ci right 1.950747e-03	k: 2036	n:1090000
Cons ci ratio: 1.135109e-03	ci left: 9.157362e-01	ci right 9.167772e-01	k: 998721	n:1090000
KS ci ratio: 1.747437e-01	ci left: 4.211466e-04	ci right 5.026470e-04	k: 502	n:1090000
PBXIP1   1090000 perm   645 sec   (1690 perm/sec)   p_kst 4.605505e-04   p_cons 9.162578e-01   p_joint 1.867890e-03

Joint ci ratio: 8.637102e-02	ci left: 1.788345e-03	ci right 1.950660e-03	k: 2055	n:1100000
Cons ci ratio: 1.129995e-03	ci left: 9.157308e-01	ci right 9.167670e-01	k: 1007875	n:1100000
KS ci ratio: 1.737107e-01	ci left: 4.225347e-04	ci right 5.037696e-04	k: 508	n:1100000
PBXIP1   1100000 perm   655 sec   (1679 perm/sec)   p_kst 4.618182e-04   p_cons 9.162500e-01   p_joint 1.868182e-03

Joint ci ratio: 8.607863e-02	ci left: 1.784574e-03	ci right 1.945971e-03	k: 2069	n:1110000
Cons ci ratio: 1.125009e-03	ci left: 9.157173e-01	ci right 9.167490e-01	k: 1017020	n:1110000
KS ci ratio: 1.725282e-01	ci left: 4.247612e-04	ci right 5.058104e-04	k: 515	n:1110000
PBXIP1   1110000 perm   665 sec   (1669 perm/sec)   p_kst 4.639640e-04   p_cons 9.162342e-01   p_joint 1.863964e-03

Joint ci ratio: 8.570683e-02	ci left: 1.784367e-03	ci right 1.945013e-03	k: 2087	n:1120000
Cons ci ratio: 1.119971e-03	ci left: 9.157202e-01	ci right 9.167473e-01	k: 1026183	n:1120000
KS ci ratio: 1.725285e-01	ci left: 4.209686e-04	ci right 5.012943e-04	k: 515	n:1120000
PBXIP1   1120000 perm   675 sec   (1659 perm/sec)   p_kst 4.598214e-04   p_cons 9.162348e-01   p_joint 1.863393e-03

Joint ci ratio: 8.546185e-02	ci left: 1.778968e-03	ci right 1.938647e-03	k: 2099	n:1130000
Cons ci ratio: 1.114872e-03	ci left: 9.157408e-01	ci right 9.167632e-01	k: 1035366	n:1130000
KS ci ratio: 1.718637e-01	ci left: 4.206305e-04	ci right 5.005503e-04	k: 519	n:1130000
PBXIP1   1130000 perm   685 sec   (1649 perm/sec)   p_kst 4.592920e-04   p_cons 9.162531e-01   p_joint 1.857522e-03

Joint ci ratio: 8.515839e-02	ci left: 1.776240e-03	ci right 1.935080e-03	k: 2114	n:1140000
Cons ci ratio: 1.109759e-03	ci left: 9.157725e-01	ci right 9.167903e-01	k: 1044562	n:1140000
KS ci ratio: 1.712066e-01	ci left: 4.202989e-04	ci right 4.998188e-04	k: 523	n:1140000
PBXIP1   1140000 perm   695 sec   (1639 perm/sec)   p_kst 4.587719e-04   p_cons 9.162825e-01   p_joint 1.854386e-03

Joint ci ratio: 8.475853e-02	ci left: 1.777816e-03	ci right 1.936014e-03	k: 2134	n:1150000
Cons ci ratio: 1.105016e-03	ci left: 9.157618e-01	ci right 9.167752e-01	k: 1053710	n:1150000
KS ci ratio: 1.703955e-01	ci left: 4.208061e-04	ci right 5.000061e-04	k: 528	n:1150000
PBXIP1   1150000 perm   706 sec   (1630 perm/sec)   p_kst 4.591304e-04   p_cons 9.162696e-01   p_joint 1.855652e-03

Joint ci ratio: 8.440350e-02	ci left: 1.777679e-03	ci right 1.935170e-03	k: 2152	n:1160000
Cons ci ratio: 1.100247e-03	ci left: 9.157634e-01	ci right 9.167724e-01	k: 1062872	n:1160000
KS ci ratio: 1.694372e-01	ci left: 4.221309e-04	ci right 5.010878e-04	k: 534	n:1160000
PBXIP1   1160000 perm   716 sec   (1620 perm/sec)   p_kst 4.603448e-04   p_cons 9.162690e-01   p_joint 1.855172e-03

Joint ci ratio: 8.938788e-02	ci left: 1.567656e-03	ci right 1.715170e-03	k: 1919	n:1170000
Cons ci ratio: 1.024778e-03	ci left: 9.254848e-01	ci right 9.264345e-01	k: 1083374	n:1170000
KS ci ratio: 1.686509e-01	ci left: 4.226157e-04	ci right 5.012591e-04	k: 539	n:1170000
PBXIP1   1170000 perm   727 sec   (1610 perm/sec)   p_kst 4.606838e-04   p_cons 9.259607e-01   p_joint 1.640171e-03

Joint ci ratio: 8.897174e-02	ci left: 1.569285e-03	ci right 1.716229e-03	k: 1937	n:1180000
Cons ci ratio: 1.020235e-03	ci left: 9.255126e-01	ci right 9.264582e-01	k: 1092664	n:1180000
KS ci ratio: 1.675682e-01	ci left: 4.247169e-04	ci right 5.031927e-04	k: 546	n:1180000
PBXIP1   1180000 perm   738 sec   (1600 perm/sec)   p_kst 4.627119e-04   p_cons 9.259864e-01   p_joint 1.641525e-03

Joint ci ratio: 8.858404e-02	ci left: 1.570066e-03	ci right 1.716410e-03	k: 1954	n:1190000
Cons ci ratio: 1.015988e-03	ci left: 9.255080e-01	ci right 9.264496e-01	k: 1101916	n:1190000
KS ci ratio: 1.666565e-01	ci left: 4.259790e-04	ci right 5.042168e-04	k: 552	n:1190000
PBXIP1   1190000 perm   748 sec   (1590 perm/sec)   p_kst 4.638655e-04   p_cons 9.259798e-01   p_joint 1.642017e-03

Joint ci ratio: 8.835858e-02	ci left: 1.565131e-03	ci right 1.710624e-03	k: 1964	n:1200000
Cons ci ratio: 1.011517e-03	ci left: 9.255411e-01	ci right 9.264785e-01	k: 1111213	n:1200000
KS ci ratio: 1.663562e-01	ci left: 4.240264e-04	ci right 5.017511e-04	k: 554	n:1200000
PBXIP1   1200000 perm   759 sec   (1581 perm/sec)   p_kst 4.616667e-04   p_cons 9.260108e-01   p_joint 1.636667e-03

Joint ci ratio: 8.820196e-02	ci left: 1.557854e-03	ci right 1.702400e-03	k: 1971	n:1210000
Cons ci ratio: 1.007305e-03	ci left: 9.255462e-01	ci right 9.264798e-01	k: 1120477	n:1210000
KS ci ratio: 1.660574e-01	ci left: 4.221061e-04	ci right 4.993261e-04	k: 556	n:1210000
PBXIP1   1210000 perm   770 sec   (1571 perm/sec)   p_kst 4.595041e-04   p_cons 9.260140e-01   p_joint 1.628926e-03

Joint ci ratio: 8.793497e-02	ci left: 1.554704e-03	ci right 1.698499e-03	k: 1983	n:1220000
Cons ci ratio: 1.003121e-03	ci left: 9.255546e-01	ci right 9.264843e-01	k: 1129745	n:1220000
KS ci ratio: 1.654644e-01	ci left: 4.217889e-04	ci right 4.986478e-04	k: 560	n:1220000
PBXIP1   1220000 perm   781 sec   (1562 perm/sec)   p_kst 4.590164e-04   p_cons 9.260205e-01   p_joint 1.625410e-03

Joint ci ratio: 8.756061e-02	ci left: 1.555582e-03	ci right 1.698814e-03	k: 2000	n:1230000
Cons ci ratio: 9.991960e-04	ci left: 9.255343e-01	ci right 9.264604e-01	k: 1138978	n:1230000
KS ci ratio: 1.648777e-01	ci left: 4.214773e-04	ci right 4.979801e-04	k: 564	n:1230000
PBXIP1   1230000 perm   792 sec   (1553 perm/sec)   p_kst 4.585366e-04   p_cons 9.259984e-01   p_joint 1.626016e-03

Joint ci ratio: 8.712615e-02	ci left: 1.558813e-03	ci right 1.701595e-03	k: 2020	n:1240000
Cons ci ratio: 9.952114e-04	ci left: 9.255290e-01	ci right 9.264513e-01	k: 1148229	n:1240000
KS ci ratio: 1.645868e-01	ci left: 4.196247e-04	ci right 4.956435e-04	k: 566	n:1240000
PBXIP1   1240000 perm   803 sec   (1544 perm/sec)   p_kst 4.564516e-04   p_cons 9.259911e-01   p_joint 1.629032e-03

Joint ci ratio: 8.684739e-02	ci left: 1.556517e-03	ci right 1.698609e-03	k: 2033	n:1250000
Cons ci ratio: 9.909790e-04	ci left: 9.255646e-01	ci right 9.264830e-01	k: 1157531	n:1250000
KS ci ratio: 1.640094e-01	ci left: 4.193361e-04	ci right 4.950098e-04	k: 570	n:1250000
PBXIP1   1250000 perm   814 sec   (1535 perm/sec)   p_kst 4.560000e-04   p_cons 9.260248e-01   p_joint 1.626400e-03

Joint ci ratio: 8.652896e-02	ci left: 1.555810e-03	ci right 1.697290e-03	k: 2048	n:1260000
Cons ci ratio: 9.871659e-04	ci left: 9.255487e-01	ci right 9.264636e-01	k: 1166769	n:1260000
KS ci ratio: 1.635803e-01	ci left: 4.182914e-04	ci right 4.935597e-04	k: 573	n:1260000
PBXIP1   1260000 perm   826 sec   (1526 perm/sec)   p_kst 4.547619e-04   p_cons 9.260071e-01   p_joint 1.625397e-03

Joint ci ratio: 8.627684e-02	ci left: 1.552804e-03	ci right 1.693579e-03	k: 2060	n:1270000
Cons ci ratio: 9.831987e-04	ci left: 9.255607e-01	ci right 9.264720e-01	k: 1176042	n:1270000
KS ci ratio: 1.632962e-01	ci left: 4.165081e-04	ci right 4.913126e-04	k: 575	n:1270000
PBXIP1   1270000 perm   837 sec   (1517 perm/sec)   p_kst 4.527559e-04   p_cons 9.260173e-01   p_joint 1.622047e-03

Joint ci ratio: 8.588179e-02	ci left: 1.555197e-03	ci right 1.695511e-03	k: 2079	n:1280000
Cons ci ratio: 9.793068e-04	ci left: 9.255687e-01	ci right 9.264763e-01	k: 1185310	n:1280000
KS ci ratio: 1.627322e-01	ci left: 4.162517e-04	ci right 4.907266e-04	k: 579	n:1280000
PBXIP1   1280000 perm   848 sec   (1509 perm/sec)   p_kst 4.523438e-04   p_cons 9.260234e-01   p_joint 1.624219e-03

Joint ci ratio: 8.539031e-02	ci left: 1.561348e-03	ci right 1.701370e-03	k: 2103	n:1290000
Cons ci ratio: 9.753393e-04	ci left: 9.255936e-01	ci right 9.264975e-01	k: 1194600	n:1290000
KS ci ratio: 1.620352e-01	ci left: 4.167434e-04	ci right 4.909558e-04	k: 584	n:1290000
PBXIP1   1290000 perm   860 sec   (1501 perm/sec)   p_kst 4.527132e-04   p_cons 9.260465e-01   p_joint 1.630233e-03

Joint ci ratio: 8.502732e-02	ci left: 1.562889e-03	ci right 1.702424e-03	k: 2121	n:1300000
Cons ci ratio: 9.714687e-04	ci left: 9.256112e-01	ci right 9.265116e-01	k: 1203881	n:1300000
KS ci ratio: 1.614841e-01	ci left: 4.164900e-04	ci right 4.903806e-04	k: 588	n:1300000
PBXIP1   1300000 perm   871 sec   (1492 perm/sec)   p_kst 4.523077e-04   p_cons 9.260623e-01   p_joint 1.631538e-03

Joint ci ratio: 8.470857e-02	ci left: 1.562913e-03	ci right 1.701901e-03	k: 2137	n:1310000
Cons ci ratio: 9.679243e-04	ci left: 9.255887e-01	ci right 9.264858e-01	k: 1213110	n:1310000
KS ci ratio: 1.609386e-01	ci left: 4.162409e-04	ci right 4.898138e-04	k: 592	n:1310000
PBXIP1   1310000 perm   883 sec   (1484 perm/sec)   p_kst 4.519084e-04   p_cons 9.260382e-01   p_joint 1.631298e-03

Joint ci ratio: 8.443266e-02	ci left: 1.561454e-03	ci right 1.699838e-03	k: 2151	n:1320000
Cons ci ratio: 9.640129e-04	ci left: 9.256243e-01	ci right 9.265178e-01	k: 1222415	n:1320000
KS ci ratio: 1.605331e-01	ci left: 4.152689e-04	ci right 4.884672e-04	k: 595	n:1320000
PBXIP1   1320000 perm   894 sec   (1476 perm/sec)   p_kst 4.507576e-04   p_cons 9.260720e-01   p_joint 1.629545e-03

Joint ci ratio: 8.406230e-02	ci left: 1.563699e-03	ci right 1.701644e-03	k: 2170	n:1330000
Cons ci ratio: 9.605387e-04	ci left: 9.256036e-01	ci right 9.264938e-01	k: 1231646	n:1330000
KS ci ratio: 1.593344e-01	ci left: 4.186427e-04	ci right 4.918319e-04	k: 604	n:1330000
PBXIP1   1330000 perm   906 sec   (1467 perm/sec)   p_kst 4.541353e-04   p_cons 9.260496e-01   p_joint 1.631579e-03

Joint ci ratio: 8.363940e-02	ci left: 1.568103e-03	ci right 1.705707e-03	k: 2192	n:1340000
Cons ci ratio: 9.568826e-04	ci left: 9.256146e-01	ci right 9.265015e-01	k: 1240919	n:1340000
KS ci ratio: 1.584204e-01	ci left: 4.205348e-04	ci right 4.935929e-04	k: 611	n:1340000
PBXIP1   1340000 perm   918 sec   (1459 perm/sec)   p_kst 4.559701e-04   p_cons 9.260590e-01   p_joint 1.635821e-03

Joint ci ratio: 8.335486e-02	ci left: 1.567367e-03	ci right 1.704415e-03	k: 2207	n:1350000
Cons ci ratio: 9.533660e-04	ci left: 9.256114e-01	ci right 9.264950e-01	k: 1250173	n:1350000
KS ci ratio: 1.581623e-01	ci left: 4.188425e-04	ci right 4.914768e-04	k: 613	n:1350000
PBXIP1   1350000 perm   930 sec   (1451 perm/sec)   p_kst 4.540741e-04   p_cons 9.260541e-01   p_joint 1.634815e-03

Joint ci ratio: 8.286809e-02	ci left: 1.574562e-03	ci right 1.711398e-03	k: 2233	n:1360000
Cons ci ratio: 9.498878e-04	ci left: 9.256082e-01	ci right 9.264885e-01	k: 1259427	n:1360000
KS ci ratio: 1.575222e-01	ci left: 4.192940e-04	ci right 4.916846e-04	k: 618	n:1360000
PBXIP1   1360000 perm   942 sec   (1443 perm/sec)   p_kst 4.544118e-04   p_cons 9.260493e-01   p_joint 1.641912e-03

Joint ci ratio: 8.246288e-02	ci left: 1.578796e-03	ci right 1.715296e-03	k: 2255	n:1370000
Cons ci ratio: 9.462255e-04	ci left: 9.256372e-01	ci right 9.265142e-01	k: 1268725	n:1370000
KS ci ratio: 1.562647e-01	ci left: 4.232462e-04	ci right 4.956811e-04	k: 628	n:1370000
PBXIP1   1370000 perm   955 sec   (1435 perm/sec)   p_kst 4.583942e-04   p_cons 9.260766e-01   p_joint 1.645985e-03

Joint ci ratio: 8.215391e-02	ci left: 1.579421e-03	ci right 1.715438e-03	k: 2272	n:1380000
Cons ci ratio: 9.427249e-04	ci left: 9.256485e-01	ci right 9.265222e-01	k: 1277999	n:1380000
KS ci ratio: 1.555246e-01	ci left: 4.243575e-04	ci right 4.966065e-04	k: 634	n:1380000
PBXIP1   1380000 perm   967 sec   (1427 perm/sec)   p_kst 4.594203e-04   p_cons 9.260862e-01   p_joint 1.646377e-03

Joint ci ratio: 8.168776e-02	ci left: 1.586380e-03	ci right 1.722185e-03	k: 2298	n:1390000
Cons ci ratio: 9.393664e-04	ci left: 9.256444e-01	ci right 9.265150e-01	k: 1287252	n:1390000
KS ci ratio: 1.549159e-01	ci left: 4.247619e-04	ci right 4.967705e-04	k: 639	n:1390000
PBXIP1   1390000 perm   979 sec   (1420 perm/sec)   p_kst 4.597122e-04   p_cons 9.260806e-01   p_joint 1.653237e-03

Joint ci ratio: 8.136979e-02	ci left: 1.587644e-03	ci right 1.723003e-03	k: 2316	n:1400000
Cons ci ratio: 9.358630e-04	ci left: 9.256668e-01	ci right 9.265342e-01	k: 1296542	n:1400000
KS ci ratio: 1.543142e-01	ci left: 4.251612e-04	ci right 4.969317e-04	k: 644	n:1400000
PBXIP1   1400000 perm   991 sec   (1412 perm/sec)   p_kst 4.600000e-04   p_cons 9.261014e-01   p_joint 1.654286e-03

Joint ci ratio: 8.103814e-02	ci left: 1.589585e-03	ci right 1.724532e-03	k: 2335	n:1410000
Cons ci ratio: 9.326544e-04	ci left: 9.256513e-01	ci right 9.265157e-01	k: 1305779	n:1410000
KS ci ratio: 1.536014e-01	ci left: 4.262373e-04	ci right 4.978264e-04	k: 650	n:1410000
PBXIP1   1410000 perm   1004 sec   (1405 perm/sec)   p_kst 4.609929e-04   p_cons 9.260844e-01   p_joint 1.656028e-03

Joint ci ratio: 8.084817e-02	ci left: 1.585981e-03	ci right 1.720290e-03	k: 2346	n:1420000
Cons ci ratio: 9.294499e-04	ci left: 9.256403e-01	ci right 9.265017e-01	k: 1315022	n:1420000
KS ci ratio: 1.527820e-01	ci left: 4.279762e-04	ci right 4.994390e-04	k: 657	n:1420000
PBXIP1   1420000 perm   1017 sec   (1397 perm/sec)   p_kst 4.626761e-04   p_cons 9.260718e-01   p_joint 1.652113e-03

Joint ci ratio: 8.045473e-02	ci left: 1.590650e-03	ci right 1.724668e-03	k: 2369	n:1430000
Cons ci ratio: 9.259707e-04	ci left: 9.256749e-01	ci right 9.265331e-01	k: 1324330	n:1430000
KS ci ratio: 1.520901e-01	ci left: 4.290192e-04	ci right 5.003021e-04	k: 663	n:1430000
PBXIP1   1430000 perm   1029 sec   (1389 perm/sec)   p_kst 4.636364e-04   p_cons 9.261049e-01   p_joint 1.656643e-03

Joint ci ratio: 8.018453e-02	ci left: 1.590491e-03	ci right 1.724026e-03	k: 2385	n:1440000
Cons ci ratio: 9.227595e-04	ci left: 9.256750e-01	ci right 9.265302e-01	k: 1333589	n:1440000
KS ci ratio: 1.517478e-01	ci left: 4.280440e-04	ci right 4.989903e-04	k: 666	n:1440000
PBXIP1   1440000 perm   1042 sec   (1382 perm/sec)   p_kst 4.625000e-04   p_cons 9.261035e-01   p_joint 1.656250e-03

Joint ci ratio: 7.985047e-02	ci left: 1.593040e-03	ci right 1.726205e-03	k: 2405	n:1450000
Cons ci ratio: 9.195166e-04	ci left: 9.256847e-01	ci right 9.265370e-01	k: 1342862	n:1450000
KS ci ratio: 1.509576e-01	ci left: 4.297368e-04	ci right 5.005592e-04	k: 673	n:1450000
PBXIP1   1450000 perm   1055 sec   (1374 perm/sec)   p_kst 4.641379e-04   p_cons 9.261117e-01   p_joint 1.658621e-03

Joint ci ratio: 7.958630e-02	ci left: 1.592869e-03	ci right 1.725559e-03	k: 2421	n:1460000
Cons ci ratio: 9.160186e-04	ci left: 9.257376e-01	ci right 9.265867e-01	k: 1352198	n:1460000
KS ci ratio: 1.506229e-01	ci left: 4.287706e-04	ci right 4.992630e-04	k: 676	n:1460000
PBXIP1   1460000 perm   1068 sec   (1367 perm/sec)   p_kst 4.630137e-04   p_cons 9.261630e-01   p_joint 1.658219e-03

Joint ci ratio: 7.924338e-02	ci left: 1.596035e-03	ci right 1.728390e-03	k: 2442	n:1470000
Cons ci ratio: 9.131138e-04	ci left: 9.257066e-01	ci right 9.265529e-01	k: 1361412	n:1470000
KS ci ratio: 1.496313e-01	ci left: 4.317463e-04	ci right 5.022188e-04	k: 685	n:1470000
PBXIP1   1470000 perm   1081 sec   (1360 perm/sec)   p_kst 4.659864e-04   p_cons 9.261306e-01   p_joint 1.661224e-03

Joint ci ratio: 7.900126e-02	ci left: 1.595186e-03	ci right 1.727047e-03	k: 2457	n:1480000
Cons ci ratio: 9.101015e-04	ci left: 9.256963e-01	ci right 9.265398e-01	k: 1370656	n:1480000
KS ci ratio: 1.489811e-01	ci left: 4.327317e-04	ci right 5.030309e-04	k: 691	n:1480000
PBXIP1   1480000 perm   1094 sec   (1352 perm/sec)   p_kst 4.668919e-04   p_cons 9.261189e-01   p_joint 1.660135e-03

Joint ci ratio: 7.879327e-02	ci left: 1.593032e-03	ci right 1.724353e-03	k: 2470	n:1490000
Cons ci ratio: 9.068964e-04	ci left: 9.257198e-01	ci right 9.265604e-01	k: 1379950	n:1490000
KS ci ratio: 1.480215e-01	ci left: 4.356434e-04	ci right 5.059193e-04	k: 700	n:1490000
PBXIP1   1490000 perm   1108 sec   (1345 perm/sec)   p_kst 4.697987e-04   p_cons 9.261409e-01   p_joint 1.657718e-03

Joint ci ratio: 7.853942e-02	ci left: 1.592869e-03	ci right 1.723734e-03	k: 2486	n:1500000
Cons ci ratio: 9.040154e-04	ci left: 9.256989e-01	ci right 9.265368e-01	k: 1389178	n:1500000
KS ci ratio: 1.478109e-01	ci left: 4.340231e-04	ci right 5.039292e-04	k: 702	n:1500000
PBXIP1   1500000 perm   1121 sec   (1339 perm/sec)   p_kst 4.680000e-04   p_cons 9.261187e-01   p_joint 1.657333e-03

Joint ci ratio: 7.822543e-02	ci left: 1.595306e-03	ci right 1.725823e-03	k: 2506	n:1510000
Cons ci ratio: 9.009437e-04	ci left: 9.257115e-01	ci right 9.265465e-01	k: 1398456	n:1510000
KS ci ratio: 1.469768e-01	ci left: 4.362514e-04	ci right 5.060851e-04	k: 710	n:1510000
PBXIP1   1510000 perm   1134 sec   (1332 perm/sec)   p_kst 4.701987e-04   p_cons 9.261298e-01   p_joint 1.659603e-03

Joint ci ratio: 7.794607e-02	ci left: 1.596421e-03	ci right 1.726542e-03	k: 2524	n:1520000
Cons ci ratio: 8.978340e-04	ci left: 9.257344e-01	ci right 9.265666e-01	k: 1407750	n:1520000
KS ci ratio: 1.466678e-01	ci left: 4.352825e-04	ci right 5.048018e-04	k: 713	n:1520000
PBXIP1   1520000 perm   1147 sec   (1325 perm/sec)   p_kst 4.690789e-04   p_cons 9.261513e-01   p_joint 1.660526e-03

Joint ci ratio: 7.768498e-02	ci left: 1.596882e-03	ci right 1.726585e-03	k: 2541	n:1530000
Cons ci ratio: 8.947989e-04	ci left: 9.257505e-01	ci right 9.265799e-01	k: 1417034	n:1530000
KS ci ratio: 1.461569e-01	ci left: 4.355858e-04	ci right 5.048900e-04	k: 718	n:1530000
PBXIP1   1530000 perm   1161 sec   (1318 perm/sec)   p_kst 4.692810e-04   p_cons 9.261660e-01   p_joint 1.660784e-03

Joint ci ratio: 7.742650e-02	ci left: 1.597337e-03	ci right 1.726626e-03	k: 2558	n:1540000
Cons ci ratio: 8.919341e-04	ci left: 9.257449e-01	ci right 9.265716e-01	k: 1426285	n:1540000
KS ci ratio: 1.457521e-01	ci left: 4.352598e-04	ci right 5.043037e-04	k: 722	n:1540000
PBXIP1   1540000 perm   1174 sec   (1312 perm/sec)   p_kst 4.688312e-04   p_cons 9.261591e-01   p_joint 1.661039e-03

Joint ci ratio: 7.714060e-02	ci left: 1.599053e-03	ci right 1.727981e-03	k: 2577	n:1550000
Cons ci ratio: 8.889205e-04	ci left: 9.257666e-01	ci right 9.265905e-01	k: 1435578	n:1550000
KS ci ratio: 1.452507e-01	ci left: 4.355601e-04	ci right 5.043933e-04	k: 727	n:1550000
PBXIP1   1550000 perm   1188 sec   (1305 perm/sec)   p_kst 4.690323e-04   p_cons 9.261794e-01   p_joint 1.662581e-03

Joint ci ratio: 7.688750e-02	ci left: 1.599491e-03	ci right 1.728012e-03	k: 2594	n:1560000
Cons ci ratio: 8.860908e-04	ci left: 9.257642e-01	ci right 9.265855e-01	k: 1444834	n:1560000
KS ci ratio: 1.450517e-01	ci left: 4.340035e-04	ci right 5.024886e-04	k: 729	n:1560000
PBXIP1   1560000 perm   1201 sec   (1299 perm/sec)   p_kst 4.673077e-04   p_cons 9.261756e-01   p_joint 1.662821e-03

Joint ci ratio: 7.666628e-02	ci left: 1.598673e-03	ci right 1.726743e-03	k: 2609	n:1570000
Cons ci ratio: 8.832305e-04	ci left: 9.257708e-01	ci right 9.265894e-01	k: 1454104	n:1570000
KS ci ratio: 1.444592e-01	ci left: 4.349224e-04	ci right 5.032480e-04	k: 735	n:1570000
PBXIP1   1570000 perm   1215 sec   (1293 perm/sec)   p_kst 4.681529e-04   p_cons 9.261809e-01   p_joint 1.661783e-03

Joint ci ratio: 7.644696e-02	ci left: 1.597867e-03	ci right 1.725490e-03	k: 2624	n:1580000
Cons ci ratio: 8.803446e-04	ci left: 9.257855e-01	ci right 9.266015e-01	k: 1463387	n:1580000
KS ci ratio: 1.439710e-01	ci left: 4.352201e-04	ci right 5.033415e-04	k: 740	n:1580000
PBXIP1   1580000 perm   1228 sec   (1286 perm/sec)   p_kst 4.683544e-04   p_cons 9.261943e-01   p_joint 1.660759e-03

Joint ci ratio: 7.620060e-02	ci left: 1.598305e-03	ci right 1.725533e-03	k: 2641	n:1590000
Cons ci ratio: 8.776362e-04	ci left: 9.257768e-01	ci right 9.265902e-01	k: 1472633	n:1590000
KS ci ratio: 1.435840e-01	ci left: 4.349081e-04	ci right 5.027820e-04	k: 744	n:1590000
PBXIP1   1590000 perm   1242 sec   (1281 perm/sec)   p_kst 4.679245e-04   p_cons 9.261843e-01   p_joint 1.661006e-03

Joint ci ratio: 7.597092e-02	ci left: 1.598126e-03	ci right 1.724939e-03	k: 2657	n:1600000
Cons ci ratio: 8.746927e-04	ci left: 9.258088e-01	ci right 9.266196e-01	k: 1481944	n:1600000
KS ci ratio: 1.432958e-01	ci left: 4.339976e-04	ci right 5.015819e-04	k: 747	n:1600000
PBXIP1   1600000 perm   1255 sec   (1275 perm/sec)   p_kst 4.668750e-04   p_cons 9.262150e-01   p_joint 1.660625e-03

Joint ci ratio: 7.570079e-02	ci left: 1.599777e-03	ci right 1.726250e-03	k: 2676	n:1610000
Cons ci ratio: 8.720400e-04	ci left: 9.257994e-01	ci right 9.266077e-01	k: 1491189	n:1610000
KS ci ratio: 1.426299e-01	ci left: 4.354943e-04	ci right 5.029697e-04	k: 754	n:1610000
PBXIP1   1610000 perm   1268 sec   (1269 perm/sec)   p_kst 4.683230e-04   p_cons 9.262043e-01   p_joint 1.662112e-03

Joint ci ratio: 7.553179e-02	ci left: 1.597169e-03	ci right 1.723142e-03	k: 2688	n:1620000
Cons ci ratio: 8.693837e-04	ci left: 9.257945e-01	ci right 9.266003e-01	k: 1500441	n:1620000
KS ci ratio: 1.425357e-01	ci left: 4.334013e-04	ci right 5.005043e-04	k: 755	n:1620000
PBXIP1   1620000 perm   1282 sec   (1264 perm/sec)   p_kst 4.660494e-04   p_cons 9.261981e-01   p_joint 1.659259e-03

Joint ci ratio: 7.530809e-02	ci left: 1.597001e-03	ci right 1.722571e-03	k: 2704	n:1630000
Cons ci ratio: 8.666621e-04	ci left: 9.258037e-01	ci right 9.266070e-01	k: 1509716	n:1630000
KS ci ratio: 1.424417e-01	ci left: 4.313340e-04	ci right 4.980691e-04	k: 756	n:1630000
PBXIP1   1630000 perm   1296 sec   (1258 perm/sec)   p_kst 4.638037e-04   p_cons 9.262061e-01   p_joint 1.658896e-03

Joint ci ratio: 7.510019e-02	ci left: 1.596238e-03	ci right 1.721386e-03	k: 2719	n:1640000
Cons ci ratio: 8.639891e-04	ci left: 9.258092e-01	ci right 9.266100e-01	k: 1518985	n:1640000
KS ci ratio: 1.419736e-01	ci left: 4.316442e-04	ci right 4.981893e-04	k: 761	n:1640000
PBXIP1   1640000 perm   1310 sec   (1252 perm/sec)   p_kst 4.640244e-04   p_cons 9.262104e-01   p_joint 1.657927e-03

Joint ci ratio: 7.490772e-02	ci left: 1.594889e-03	ci right 1.719598e-03	k: 2733	n:1650000
Cons ci ratio: 8.614895e-04	ci left: 9.257909e-01	ci right 9.265894e-01	k: 1528215	n:1650000
KS ci ratio: 1.416950e-01	ci left: 4.307818e-04	ci right 4.970526e-04	k: 764	n:1650000
PBXIP1   1650000 perm   1324 sec   (1247 perm/sec)   p_kst 4.630303e-04   p_cons 9.261909e-01   p_joint 1.656364e-03

Joint ci ratio: 7.467590e-02	ci left: 1.595331e-03	ci right 1.719671e-03	k: 2750	n:1660000
Cons ci ratio: 8.587996e-04	ci left: 9.258067e-01	ci right 9.266027e-01	k: 1537501	n:1660000
KS ci ratio: 1.413260e-01	ci left: 4.305111e-04	ci right 4.965532e-04	k: 768	n:1660000
PBXIP1   1660000 perm   1337 sec   (1241 perm/sec)   p_kst 4.626506e-04   p_cons 9.262054e-01   p_joint 1.656627e-03

Joint ci ratio: 7.443276e-02	ci left: 1.596356e-03	ci right 1.720353e-03	k: 2768	n:1670000
Cons ci ratio: 8.562772e-04	ci left: 9.257994e-01	ci right 9.265931e-01	k: 1546749	n:1670000
KS ci ratio: 1.409599e-01	ci left: 4.302438e-04	ci right 4.960596e-04	k: 772	n:1670000
PBXIP1   1670000 perm   1351 sec   (1236 perm/sec)   p_kst 4.622754e-04   p_cons 9.261970e-01   p_joint 1.657485e-03

Joint ci ratio: 7.425873e-02	ci left: 1.594448e-03	ci right 1.717995e-03	k: 2781	n:1680000
Cons ci ratio: 8.536021e-04	ci left: 9.258203e-01	ci right 9.266115e-01	k: 1556044	n:1680000
KS ci ratio: 1.407780e-01	ci left: 4.288313e-04	ci right 4.943393e-04	k: 774	n:1680000
PBXIP1   1680000 perm   1366 sec   (1230 perm/sec)   p_kst 4.607143e-04   p_cons 9.262167e-01   p_joint 1.655357e-03

Joint ci ratio: 7.404611e-02	ci left: 1.594305e-03	ci right 1.717472e-03	k: 2797	n:1690000
Cons ci ratio: 8.510662e-04	ci left: 9.258226e-01	ci right 9.266114e-01	k: 1565308	n:1690000
KS ci ratio: 1.405968e-01	ci left: 4.274356e-04	ci right 4.926393e-04	k: 776	n:1690000
PBXIP1   1690000 perm   1380 sec   (1224 perm/sec)   p_kst 4.591716e-04   p_cons 9.262178e-01   p_joint 1.655030e-03

Joint ci ratio: 7.386161e-02	ci left: 1.593010e-03	ci right 1.715757e-03	k: 2811	n:1700000
Cons ci ratio: 8.484431e-04	ci left: 9.258425e-01	ci right 9.266290e-01	k: 1574602	n:1700000
KS ci ratio: 1.402364e-01	ci left: 4.271916e-04	ci right 4.921770e-04	k: 780	n:1700000
PBXIP1   1700000 perm   1395 sec   (1219 perm/sec)   p_kst 4.588235e-04   p_cons 9.262365e-01   p_joint 1.653529e-03

Joint ci ratio: 7.366543e-02	ci left: 1.592304e-03	ci right 1.714657e-03	k: 2826	n:1710000
Cons ci ratio: 8.459744e-04	ci left: 9.258411e-01	ci right 9.266253e-01	k: 1583860	n:1710000
KS ci ratio: 1.399679e-01	ci left: 4.263863e-04	ci right 4.911146e-04	k: 783	n:1710000
PBXIP1   1710000 perm   1410 sec   (1213 perm/sec)   p_kst 4.578947e-04   p_cons 9.262339e-01   p_joint 1.652632e-03

Joint ci ratio: 7.343200e-02	ci left: 1.593319e-03	ci right 1.715345e-03	k: 2844	n:1720000
Cons ci ratio: 8.435702e-04	ci left: 9.258328e-01	ci right 9.266147e-01	k: 1593106	n:1720000
KS ci ratio: 1.393471e-01	ci left: 4.278349e-04	ci right 4.924711e-04	k: 790	n:1720000
PBXIP1   1720000 perm   1424 sec   (1208 perm/sec)   p_kst 4.593023e-04   p_cons 9.262244e-01   p_joint 1.653488e-03

Joint ci ratio: 7.329056e-02	ci left: 1.590351e-03	ci right 1.711905e-03	k: 2855	n:1730000
Cons ci ratio: 8.412931e-04	ci left: 9.258071e-01	ci right 9.265869e-01	k: 1602322	n:1730000
KS ci ratio: 1.389961e-01	ci left: 4.275935e-04	ci right 4.920171e-04	k: 794	n:1730000
PBXIP1   1730000 perm   1439 sec   (1203 perm/sec)   p_kst 4.589595e-04   p_cons 9.261977e-01   p_joint 1.650289e-03

Joint ci ratio: 7.306066e-02	ci left: 1.591366e-03	ci right 1.712601e-03	k: 2873	n:1740000
Cons ci ratio: 8.388932e-04	ci left: 9.258048e-01	ci right 9.265823e-01	k: 1611578	n:1740000
KS ci ratio: 1.382158e-01	ci left: 4.301291e-04	ci right 4.945410e-04	k: 803	n:1740000
PBXIP1   1740000 perm   1453 sec   (1197 perm/sec)   p_kst 4.614943e-04   p_cons 9.261943e-01   p_joint 1.651149e-03

Joint ci ratio: 7.284552e-02	ci left: 1.591810e-03	ci right 1.712706e-03	k: 2890	n:1750000
Cons ci ratio: 8.364228e-04	ci left: 9.258174e-01	ci right 9.265926e-01	k: 1620860	n:1750000
KS ci ratio: 1.377880e-01	ci left: 4.304297e-04	ci right 4.946708e-04	k: 808	n:1750000
PBXIP1   1750000 perm   1468 sec   (1192 perm/sec)   p_kst 4.617143e-04   p_cons 9.262057e-01   p_joint 1.651429e-03

Joint ci ratio: 7.261977e-02	ci left: 1.592807e-03	ci right 1.713388e-03	k: 2908	n:1760000
Cons ci ratio: 8.341162e-04	ci left: 9.258065e-01	ci right 9.265796e-01	k: 1630101	n:1760000
KS ci ratio: 1.374486e-01	ci left: 4.301786e-04	ci right 4.942111e-04	k: 812	n:1760000
PBXIP1   1760000 perm   1482 sec   (1187 perm/sec)   p_kst 4.613636e-04   p_cons 9.261938e-01   p_joint 1.652273e-03

Joint ci ratio: 7.238372e-02	ci left: 1.594348e-03	ci right 1.714637e-03	k: 2927	n:1770000
Cons ci ratio: 8.317151e-04	ci left: 9.258144e-01	ci right 9.265853e-01	k: 1639375	n:1770000
KS ci ratio: 1.369442e-01	ci left: 4.310217e-04	ci right 4.949250e-04	k: 818	n:1770000
PBXIP1   1770000 perm   1497 sec   (1182 perm/sec)   p_kst 4.621469e-04   p_cons 9.262006e-01   p_joint 1.653672e-03

Joint ci ratio: 7.218677e-02	ci left: 1.594217e-03	ci right 1.714155e-03	k: 2943	n:1780000
Cons ci ratio: 8.293790e-04	ci left: 9.258149e-01	ci right 9.265837e-01	k: 1648636	n:1780000
KS ci ratio: 1.361977e-01	ci left: 4.334837e-04	ci right 4.973733e-04	k: 827	n:1780000
PBXIP1   1780000 perm   1512 sec   (1177 perm/sec)   p_kst 4.646067e-04   p_cons 9.262000e-01   p_joint 1.653371e-03

Joint ci ratio: 7.191844e-02	ci left: 1.597380e-03	ci right 1.717091e-03	k: 2965	n:1790000
Cons ci ratio: 8.270759e-04	ci left: 9.258132e-01	ci right 9.265798e-01	k: 1657893	n:1790000
KS ci ratio: 1.357068e-01	ci left: 4.343000e-04	ci right 4.980606e-04	k: 833	n:1790000
PBXIP1   1790000 perm   1527 sec   (1172 perm/sec)   p_kst 4.653631e-04   p_cons 9.261972e-01   p_joint 1.656425e-03

Joint ci ratio: 7.170117e-02	ci left: 1.598326e-03	ci right 1.717731e-03	k: 2983	n:1800000
Cons ci ratio: 8.247215e-04	ci left: 9.258232e-01	ci right 9.265876e-01	k: 1667171	n:1800000
KS ci ratio: 1.352212e-01	ci left: 4.351076e-04	ci right 4.987398e-04	k: 839	n:1800000
PBXIP1   1800000 perm   1542 sec   (1167 perm/sec)   p_kst 4.661111e-04   p_cons 9.262061e-01   p_joint 1.657222e-03

Joint ci ratio: 7.145011e-02	ci left: 1.600890e-03	ci right 1.720050e-03	k: 3004	n:1810000
Cons ci ratio: 8.223040e-04	ci left: 9.258470e-01	ci right 9.266091e-01	k: 1676474	n:1810000
KS ci ratio: 1.347408e-01	ci left: 4.359066e-04	ci right 4.994111e-04	k: 845	n:1810000
PBXIP1   1810000 perm   1557 sec   (1163 perm/sec)   p_kst 4.668508e-04   p_cons 9.262287e-01   p_joint 1.659669e-03

Joint ci ratio: 7.130796e-02	ci left: 1.598570e-03	ci right 1.717311e-03	k: 3016	n:1820000
Cons ci ratio: 8.199538e-04	ci left: 9.258627e-01	ci right 9.266227e-01	k: 1685763	n:1820000
KS ci ratio: 1.344235e-01	ci left: 4.356353e-04	ci right 4.989389e-04	k: 849	n:1820000
PBXIP1   1820000 perm   1572 sec   (1158 perm/sec)   p_kst 4.664835e-04   p_cons 9.262434e-01   p_joint 1.657143e-03

Joint ci ratio: 7.111964e-02	ci left: 1.598422e-03	ci right 1.716825e-03	k: 3032	n:1830000
Cons ci ratio: 8.176464e-04	ci left: 9.258745e-01	ci right 9.266324e-01	k: 1695045	n:1830000
KS ci ratio: 1.341083e-01	ci left: 4.353672e-04	ci right 4.984716e-04	k: 853	n:1830000
PBXIP1   1830000 perm   1587 sec   (1153 perm/sec)   p_kst 4.661202e-04   p_cons 9.262541e-01   p_joint 1.656831e-03

Joint ci ratio: 7.087462e-02	ci left: 1.600945e-03	ci right 1.719110e-03	k: 3053	n:1840000
Cons ci ratio: 8.155238e-04	ci left: 9.258583e-01	ci right 9.266142e-01	k: 1704276	n:1840000
KS ci ratio: 1.335619e-01	ci left: 4.366781e-04	ci right 4.996941e-04	k: 860	n:1840000
PBXIP1   1840000 perm   1602 sec   (1149 perm/sec)   p_kst 4.673913e-04   p_cons 9.262370e-01   p_joint 1.659239e-03

Joint ci ratio: 7.072432e-02	ci left: 1.599194e-03	ci right 1.716969e-03	k: 3066	n:1850000
Cons ci ratio: 8.133243e-04	ci left: 9.258581e-01	ci right 9.266119e-01	k: 1713536	n:1850000
KS ci ratio: 1.329456e-01	ci left: 4.384978e-04	ci right 5.014614e-04	k: 868	n:1850000
PBXIP1   1850000 perm   1617 sec   (1144 perm/sec)   p_kst 4.691892e-04   p_cons 9.262357e-01   p_joint 1.657297e-03

Joint ci ratio: 7.054057e-02	ci left: 1.599047e-03	ci right 1.716492e-03	k: 3082	n:1860000
Cons ci ratio: 8.112287e-04	ci left: 9.258433e-01	ci right 9.265952e-01	k: 1722769	n:1860000
KS ci ratio: 1.327168e-01	ci left: 4.376996e-04	ci right 5.004319e-04	k: 871	n:1860000
PBXIP1   1860000 perm   1633 sec   (1139 perm/sec)   p_kst 4.682796e-04   p_cons 9.262199e-01   p_joint 1.656989e-03

Joint ci ratio: 7.033552e-02	ci left: 1.599952e-03	ci right 1.717108e-03	k: 3100	n:1870000
Cons ci ratio: 8.090605e-04	ci left: 9.258436e-01	ci right 9.265935e-01	k: 1732030	n:1870000
KS ci ratio: 1.323379e-01	ci left: 4.379441e-04	ci right 5.005182e-04	k: 876	n:1870000
PBXIP1   1870000 perm   1648 sec   (1135 perm/sec)   p_kst 4.684492e-04   p_cons 9.262193e-01   p_joint 1.657754e-03

Joint ci ratio: 7.022250e-02	ci left: 1.596667e-03	ci right 1.713387e-03	k: 3110	n:1880000
Cons ci ratio: 8.069975e-04	ci left: 9.258291e-01	ci right 9.265770e-01	k: 1741263	n:1880000
KS ci ratio: 1.320372e-01	ci left: 4.376719e-04	ci right 5.000538e-04	k: 880	n:1880000
PBXIP1   1880000 perm   1663 sec   (1130 perm/sec)   p_kst 4.680851e-04   p_cons 9.262037e-01   p_joint 1.654255e-03

Joint ci ratio: 7.003141e-02	ci left: 1.597056e-03	ci right 1.713474e-03	k: 3127	n:1890000
Cons ci ratio: 8.048848e-04	ci left: 9.258258e-01	ci right 9.265718e-01	k: 1750517	n:1890000
KS ci ratio: 1.318130e-01	ci left: 4.368911e-04	ci right 4.990477e-04	k: 883	n:1890000
PBXIP1   1890000 perm   1679 sec   (1126 perm/sec)   p_kst 4.671958e-04   p_cons 9.261995e-01   p_joint 1.654497e-03

Joint ci ratio: 6.983076e-02	ci left: 1.597958e-03	ci right 1.714095e-03	k: 3145	n:1900000
Cons ci ratio: 8.027608e-04	ci left: 9.258273e-01	ci right 9.265714e-01	k: 1759780	n:1900000
KS ci ratio: 1.314418e-01	ci left: 4.371366e-04	ci right 4.991393e-04	k: 888	n:1900000
PBXIP1   1900000 perm   1695 sec   (1121 perm/sec)   p_kst 4.673684e-04   p_cons 9.262000e-01   p_joint 1.655263e-03

Joint ci ratio: 6.968699e-02	ci left: 1.596280e-03	ci right 1.712046e-03	k: 3158	n:1910000
Cons ci ratio: 8.007179e-04	ci left: 9.258178e-01	ci right 9.265599e-01	k: 1769022	n:1910000
KS ci ratio: 1.309273e-01	ci left: 4.383926e-04	ci right 5.003111e-04	k: 895	n:1910000
PBXIP1   1910000 perm   1710 sec   (1117 perm/sec)   p_kst 4.685864e-04   p_cons 9.261895e-01   p_joint 1.653403e-03

Joint ci ratio: 6.951119e-02	ci left: 1.596154e-03	ci right 1.711607e-03	k: 3174	n:1920000
Cons ci ratio: 7.986844e-04	ci left: 9.258094e-01	ci right 9.265497e-01	k: 1778266	n:1920000
KS ci ratio: 1.305635e-01	ci left: 4.386283e-04	ci right 5.003946e-04	k: 900	n:1920000
PBXIP1   1920000 perm   1727 sec   (1112 perm/sec)   p_kst 4.687500e-04   p_cons 9.261802e-01   p_joint 1.653125e-03

Joint ci ratio: 6.929322e-02	ci left: 1.598067e-03	ci right 1.713281e-03	k: 3194	n:1930000
Cons ci ratio: 7.965999e-04	ci left: 9.258126e-01	ci right 9.265509e-01	k: 1787532	n:1930000
KS ci ratio: 1.302746e-01	ci left: 4.383605e-04	ci right 4.999421e-04	k: 904	n:1930000
PBXIP1   1930000 perm   1743 sec   (1107 perm/sec)   p_kst 4.683938e-04   p_cons 9.261824e-01   p_joint 1.654922e-03

Joint ci ratio: 6.914195e-02	ci left: 1.596921e-03	ci right 1.711791e-03	k: 3208	n:1940000
Cons ci ratio: 7.945675e-04	ci left: 9.258095e-01	ci right 9.265459e-01	k: 1796786	n:1940000
KS ci ratio: 1.300593e-01	ci left: 4.375970e-04	ci right 4.989618e-04	k: 907	n:1940000
PBXIP1   1940000 perm   1759 sec   (1103 perm/sec)   p_kst 4.675258e-04   p_cons 9.261784e-01   p_joint 1.653608e-03

Joint ci ratio: 6.891674e-02	ci left: 1.599315e-03	ci right 1.713968e-03	k: 3229	n:1950000
Cons ci ratio: 7.925061e-04	ci left: 9.258142e-01	ci right 9.265487e-01	k: 1806055	n:1950000
KS ci ratio: 1.294900e-01	ci left: 4.393223e-04	ci right 5.006386e-04	k: 915	n:1950000
PBXIP1   1950000 perm   1775 sec   (1099 perm/sec)   p_kst 4.692308e-04   p_cons 9.261821e-01   p_joint 1.655897e-03

Joint ci ratio: 6.876791e-02	ci left: 1.598175e-03	ci right 1.712489e-03	k: 3243	n:1960000
Cons ci ratio: 7.905314e-04	ci left: 9.258065e-01	ci right 9.265392e-01	k: 1815300	n:1960000
KS ci ratio: 1.290679e-01	ci left: 4.400431e-04	ci right 5.012445e-04	k: 921	n:1960000
PBXIP1   1960000 perm   1791 sec   (1094 perm/sec)   p_kst 4.698980e-04   p_cons 9.261735e-01   p_joint 1.654592e-03

Joint ci ratio: 6.864115e-02	ci left: 1.596049e-03	ci right 1.709992e-03	k: 3255	n:1970000
Cons ci ratio: 7.886622e-04	ci left: 9.257832e-01	ci right 9.265141e-01	k: 1824514	n:1970000
KS ci ratio: 1.289283e-01	ci left: 4.387918e-04	ci right 4.997481e-04	k: 923	n:1970000
PBXIP1   1970000 perm   1808 sec   (1090 perm/sec)   p_kst 4.685279e-04   p_cons 9.261492e-01   p_joint 1.652284e-03

Joint ci ratio: 6.842078e-02	ci left: 1.598413e-03	ci right 1.712144e-03	k: 3276	n:1980000
Cons ci ratio: 7.866114e-04	ci left: 9.257940e-01	ci right 9.265230e-01	k: 1833795	n:1980000
KS ci ratio: 1.288587e-01	ci left: 4.370644e-04	ci right 4.977455e-04	k: 924	n:1980000
PBXIP1   1980000 perm   1824 sec   (1086 perm/sec)   p_kst 4.666667e-04   p_cons 9.261591e-01   p_joint 1.654545e-03

Joint ci ratio: 6.821289e-02	ci left: 1.600259e-03	ci right 1.713762e-03	k: 3296	n:1990000
Cons ci ratio: 7.846515e-04	ci left: 9.257916e-01	ci right 9.265188e-01	k: 1843050	n:1990000
KS ci ratio: 1.285118e-01	ci left: 4.372998e-04	ci right 4.978377e-04	k: 929	n:1990000
PBXIP1   1990000 perm   1840 sec   (1081 perm/sec)   p_kst 4.668342e-04   p_cons 9.261558e-01   p_joint 1.656281e-03

Joint ci ratio: 6.804798e-02	ci left: 1.600121e-03	ci right 1.713329e-03	k: 3312	n:2000000
Cons ci ratio: 7.827176e-04	ci left: 9.257872e-01	ci right 9.265126e-01	k: 1852301	n:2000000
KS ci ratio: 1.282363e-01	ci left: 4.370491e-04	ci right 4.974127e-04	k: 933	n:2000000
PBXIP1   2000000 perm   1857 sec   (1077 perm/sec)   p_kst 4.665000e-04   p_cons 9.261505e-01   p_joint 1.656000e-03

Joint ci ratio: 6.789448e-02	ci left: 1.599497e-03	ci right 1.712395e-03	k: 3327	n:2010000
Cons ci ratio: 7.807468e-04	ci left: 9.257918e-01	ci right 9.265154e-01	k: 1861570	n:2010000
KS ci ratio: 1.278264e-01	ci left: 4.377642e-04	ci right 4.980186e-04	k: 939	n:2010000
PBXIP1   2010000 perm   1874 sec   (1073 perm/sec)   p_kst 4.671642e-04   p_cons 9.261542e-01   p_joint 1.655224e-03

Joint ci ratio: 6.776232e-02	ci left: 1.597905e-03	ci right 1.710462e-03	k: 3340	n:2020000
Cons ci ratio: 7.787176e-04	ci left: 9.258093e-01	ci right 9.265310e-01	k: 1870865	n:2020000
KS ci ratio: 1.276907e-01	ci left: 4.365555e-04	ci right 4.965749e-04	k: 941	n:2020000
PBXIP1   2020000 perm   1890 sec   (1069 perm/sec)   p_kst 4.658416e-04   p_cons 9.261708e-01   p_joint 1.653465e-03

Joint ci ratio: 6.756035e-02	ci left: 1.599719e-03	ci right 1.712055e-03	k: 3360	n:2030000
Cons ci ratio: 7.768859e-04	ci left: 9.257946e-01	ci right 9.265146e-01	k: 1880095	n:2030000
KS ci ratio: 1.274205e-01	ci left: 4.363125e-04	ci right 4.961620e-04	k: 945	n:2030000
PBXIP1   2030000 perm   1907 sec   (1065 perm/sec)   p_kst 4.655172e-04   p_cons 9.261552e-01   p_joint 1.655172e-03

Joint ci ratio: 6.747020e-02	ci left: 1.596214e-03	ci right 1.708149e-03	k: 3369	n:2040000
Cons ci ratio: 7.749587e-04	ci left: 9.257991e-01	ci right 9.265173e-01	k: 1889364	n:2040000
KS ci ratio: 1.272190e-01	ci left: 4.355975e-04	ci right 4.952473e-04	k: 948	n:2040000
PBXIP1   2040000 perm   1923 sec   (1061 perm/sec)   p_kst 4.647059e-04   p_cons 9.261588e-01   p_joint 1.651471e-03

Joint ci ratio: 6.721127e-02	ci left: 1.600897e-03	ci right 1.712713e-03	k: 3395	n:2050000
Cons ci ratio: 7.730651e-04	ci left: 9.258002e-01	ci right 9.265166e-01	k: 1898626	n:2050000
KS ci ratio: 1.267523e-01	ci left: 4.367788e-04	ci right 4.963544e-04	k: 955	n:2050000
PBXIP1   2050000 perm   1940 sec   (1057 perm/sec)   p_kst 4.658537e-04   p_cons 9.261590e-01   p_joint 1.656098e-03

Joint ci ratio: 6.706335e-02	ci left: 1.600285e-03	ci right 1.711803e-03	k: 3410	n:2060000
Cons ci ratio: 7.711032e-04	ci left: 9.258159e-01	ci right 9.265305e-01	k: 1907918	n:2060000
KS ci ratio: 1.264879e-01	ci left: 4.365388e-04	ci right 4.959482e-04	k: 959	n:2060000
PBXIP1   2060000 perm   1957 sec   (1053 perm/sec)   p_kst 4.655340e-04   p_cons 9.261738e-01   p_joint 1.655340e-03

Joint ci ratio: 6.684803e-02	ci left: 1.603005e-03	ci right 1.714339e-03	k: 3432	n:2070000
Cons ci ratio: 7.692974e-04	ci left: 9.258062e-01	ci right 9.265192e-01	k: 1917158	n:2070000
KS ci ratio: 1.258990e-01	ci left: 4.386405e-04	ci right 4.980373e-04	k: 968	n:2070000
PBXIP1   2070000 perm   1974 sec   (1049 perm/sec)   p_kst 4.676329e-04   p_cons 9.261633e-01   p_joint 1.657971e-03

Joint ci ratio: 6.666377e-02	ci left: 1.604280e-03	ci right 1.715384e-03	k: 3451	n:2080000
Cons ci ratio: 7.674962e-04	ci left: 9.257981e-01	ci right 9.265094e-01	k: 1926401	n:2080000
KS ci ratio: 1.254467e-01	ci left: 4.397912e-04	ci right 4.991140e-04	k: 975	n:2080000
PBXIP1   2080000 perm   1991 sec   (1045 perm/sec)   p_kst 4.687500e-04   p_cons 9.261543e-01   p_joint 1.659135e-03

Joint ci ratio: 6.653866e-02	ci left: 1.602720e-03	ci right 1.713500e-03	k: 3464	n:2090000
Cons ci ratio: 7.658843e-04	ci left: 9.257584e-01	ci right 9.264682e-01	k: 1935578	n:2090000
KS ci ratio: 1.251904e-01	ci left: 4.395408e-04	ci right 4.986997e-04	k: 979	n:2090000
PBXIP1   2090000 perm   2008 sec   (1041 perm/sec)   p_kst 4.684211e-04   p_cons 9.261139e-01   p_joint 1.657416e-03

Joint ci ratio: 6.633787e-02	ci left: 1.604922e-03	ci right 1.715507e-03	k: 3485	n:2100000
Cons ci ratio: 7.640563e-04	ci left: 9.257597e-01	ci right 9.264677e-01	k: 1944840	n:2100000
KS ci ratio: 1.250629e-01	ci left: 4.383703e-04	ci right 4.973071e-04	k: 981	n:2100000
PBXIP1   2100000 perm   2025 sec   (1037 perm/sec)   p_kst 4.671429e-04   p_cons 9.261143e-01   p_joint 1.659524e-03

Joint ci ratio: 6.617670e-02	ci left: 1.605240e-03	ci right 1.715567e-03	k: 3502	n:2110000
Cons ci ratio: 7.622202e-04	ci left: 9.257647e-01	ci right 9.264711e-01	k: 1954110	n:2110000
KS ci ratio: 1.247458e-01	ci left: 4.385884e-04	ci right 4.973939e-04	k: 986	n:2110000
PBXIP1   2110000 perm   2042 sec   (1033 perm/sec)   p_kst 4.672986e-04   p_cons 9.261185e-01   p_joint 1.659716e-03

Joint ci ratio: 6.601670e-02	ci left: 1.605554e-03	ci right 1.715626e-03	k: 3519	n:2120000
Cons ci ratio: 7.603815e-04	ci left: 9.257726e-01	ci right 9.264772e-01	k: 1963386	n:2120000
KS ci ratio: 1.245567e-01	ci left: 4.378905e-04	ci right 4.965069e-04	k: 989	n:2120000
PBXIP1   2120000 perm   2059 sec   (1030 perm/sec)   p_kst 4.665094e-04   p_cons 9.261255e-01   p_joint 1.659906e-03

Joint ci ratio: 6.581127e-02	ci left: 1.608175e-03	ci right 1.718070e-03	k: 3541	n:2130000
Cons ci ratio: 7.585899e-04	ci left: 9.257742e-01	ci right 9.264772e-01	k: 1972649	n:2130000
KS ci ratio: 1.239322e-01	ci left: 4.403837e-04	ci right 4.990165e-04	k: 999	n:2130000
PBXIP1   2130000 perm   2076 sec   (1026 perm/sec)   p_kst 4.690141e-04   p_cons 9.261263e-01   p_joint 1.662441e-03

Joint ci ratio: 6.564466e-02	ci left: 1.608933e-03	ci right 1.718591e-03	k: 3559	n:2140000
Cons ci ratio: 7.568781e-04	ci left: 9.257637e-01	ci right 9.264651e-01	k: 1981886	n:2140000
KS ci ratio: 1.237467e-01	ci left: 4.396842e-04	ci right 4.981300e-04	k: 1002	n:2140000
PBXIP1   2140000 perm   2093 sec   (1022 perm/sec)   p_kst 4.682243e-04   p_cons 9.261150e-01   p_joint 1.663084e-03

Joint ci ratio: 6.553438e-02	ci left: 1.606939e-03	ci right 1.716271e-03	k: 3571	n:2150000
Cons ci ratio: 7.551317e-04	ci left: 9.257616e-01	ci right 9.264614e-01	k: 1991141	n:2150000
KS ci ratio: 1.237469e-01	ci left: 4.376392e-04	ci right 4.958131e-04	k: 1002	n:2150000
PBXIP1   2150000 perm   2111 sec   (1019 perm/sec)   p_kst 4.660465e-04   p_cons 9.261121e-01   p_joint 1.660930e-03

Joint ci ratio: 6.537898e-02	ci left: 1.607241e-03	ci right 1.716324e-03	k: 3588	n:2160000
Cons ci ratio: 7.534177e-04	ci left: 9.257559e-01	ci right 9.264541e-01	k: 2000388	n:2160000
KS ci ratio: 1.235009e-01	ci left: 4.374076e-04	ci right 4.954268e-04	k: 1006	n:2160000
PBXIP1   2160000 perm   2128 sec   (1015 perm/sec)   p_kst 4.657407e-04   p_cons 9.261056e-01   p_joint 1.661111e-03

Joint ci ratio: 6.523374e-02	ci left: 1.607087e-03	ci right 1.715908e-03	k: 3604	n:2170000
Cons ci ratio: 7.516924e-04	ci left: 9.257544e-01	ci right 9.264510e-01	k: 2009644	n:2170000
KS ci ratio: 1.232563e-01	ci left: 4.371784e-04	ci right 4.950439e-04	k: 1010	n:2170000
PBXIP1   2170000 perm   2146 sec   (1011 perm/sec)   p_kst 4.654378e-04   p_cons 9.261032e-01   p_joint 1.660829e-03

Joint ci ratio: 6.506248e-02	ci left: 1.608289e-03	ci right 1.716895e-03	k: 3623	n:2180000
Cons ci ratio: 7.499413e-04	ci left: 9.257597e-01	ci right 9.264547e-01	k: 2018915	n:2180000
KS ci ratio: 1.231347e-01	ci left: 4.360621e-04	ci right 4.937187e-04	k: 1012	n:2180000
PBXIP1   2180000 perm   2164 sec   (1008 perm/sec)   p_kst 4.642202e-04   p_cons 9.261078e-01   p_joint 1.661927e-03

Joint ci ratio: 6.491933e-02	ci left: 1.608133e-03	ci right 1.716480e-03	k: 3639	n:2190000
Cons ci ratio: 7.481774e-04	ci left: 9.257697e-01	ci right 9.264630e-01	k: 2028196	n:2190000
KS ci ratio: 1.228319e-01	ci left: 4.362838e-04	ci right 4.938176e-04	k: 1017	n:2190000
PBXIP1   2190000 perm   2181 sec   (1004 perm/sec)   p_kst 4.643836e-04   p_cons 9.261169e-01   p_joint 1.661644e-03

Joint ci ratio: 6.480377e-02	ci left: 1.606636e-03	ci right 1.714682e-03	k: 3652	n:2200000
Cons ci ratio: 7.463714e-04	ci left: 9.257895e-01	ci right 9.264812e-01	k: 2037499	n:2200000
KS ci ratio: 1.224715e-01	ci left: 4.369443e-04	ci right 4.943839e-04	k: 1023	n:2200000
PBXIP1   2200000 perm   2199 sec   (1000 perm/sec)   p_kst 4.650000e-04   p_cons 9.261359e-01   p_joint 1.660000e-03

Joint ci ratio: 6.471535e-02	ci left: 1.603818e-03	ci right 1.711522e-03	k: 3662	n:2210000
Cons ci ratio: 7.447384e-04	ci left: 9.257797e-01	ci right 9.264699e-01	k: 2046737	n:2210000
KS ci ratio: 1.222330e-01	ci left: 4.367218e-04	ci right 4.940122e-04	k: 1027	n:2210000
PBXIP1   2210000 perm   2217 sec   (997 perm/sec)   p_kst 4.647059e-04   p_cons 9.261253e-01   p_joint 1.657014e-03

Joint ci ratio: 6.451303e-02	ci left: 1.606786e-03	ci right 1.714340e-03	k: 3685	n:2220000
Cons ci ratio: 7.431013e-04	ci left: 9.257727e-01	ci right 9.264613e-01	k: 2055981	n:2220000
KS ci ratio: 1.217600e-01	ci left: 4.382482e-04	ci right 4.955004e-04	k: 1035	n:2220000
PBXIP1   2220000 perm   2235 sec   (993 perm/sec)   p_kst 4.662162e-04   p_cons 9.261176e-01   p_joint 1.659910e-03

Joint ci ratio: 6.435607e-02	ci left: 1.607523e-03	ci right 1.714854e-03	k: 3703	n:2230000
Cons ci ratio: 7.414945e-04	ci left: 9.257622e-01	ci right 9.264493e-01	k: 2065217	n:2230000
KS ci ratio: 1.215842e-01	ci left: 4.375873e-04	ci right 4.946647e-04	k: 1038	n:2230000
PBXIP1   2230000 perm   2253 sec   (990 perm/sec)   p_kst 4.654709e-04   p_cons 9.261063e-01   p_joint 1.660538e-03

Joint ci ratio: 6.425214e-02	ci left: 1.605617e-03	ci right 1.712642e-03	k: 3715	n:2240000
Cons ci ratio: 7.399149e-04	ci left: 9.257486e-01	ci right 9.264342e-01	k: 2074446	n:2240000
KS ci ratio: 1.214674e-01	ci left: 4.364995e-04	ci right 4.933763e-04	k: 1040	n:2240000
PBXIP1   2240000 perm   2271 sec   (986 perm/sec)   p_kst 4.642857e-04   p_cons 9.260920e-01   p_joint 1.658482e-03

Joint ci ratio: 6.405412e-02	ci left: 1.608540e-03	ci right 1.715416e-03	k: 3738	n:2250000
Cons ci ratio: 7.383860e-04	ci left: 9.257276e-01	ci right 9.264118e-01	k: 2083658	n:2250000
KS ci ratio: 1.211188e-01	ci left: 4.371453e-04	ci right 4.939311e-04	k: 1046	n:2250000
PBXIP1   2250000 perm   2289 sec   (983 perm/sec)   p_kst 4.648889e-04   p_cons 9.260702e-01   p_joint 1.661333e-03

Joint ci ratio: 6.390900e-02	ci left: 1.608824e-03	ci right 1.715468e-03	k: 3755	n:2260000
Cons ci ratio: 7.366808e-04	ci left: 9.257413e-01	ci right 9.264240e-01	k: 2092948	n:2260000
KS ci ratio: 1.207159e-01	ci left: 4.382147e-04	ci right 4.949365e-04	k: 1053	n:2260000
PBXIP1   2260000 perm   2308 sec   (979 perm/sec)   p_kst 4.659292e-04   p_cons 9.260832e-01   p_joint 1.661504e-03

Joint ci ratio: 6.376485e-02	ci left: 1.609106e-03	ci right 1.715520e-03	k: 3772	n:2270000
Cons ci ratio: 7.349448e-04	ci left: 9.257629e-01	ci right 9.264440e-01	k: 2102256	n:2270000
KS ci ratio: 1.204305e-01	ci left: 4.384204e-04	ci right 4.950252e-04	k: 1058	n:2270000
PBXIP1   2270000 perm   2327 sec   (976 perm/sec)   p_kst 4.660793e-04   p_cons 9.261040e-01   p_joint 1.661674e-03

Joint ci ratio: 6.363009e-02	ci left: 1.608954e-03	ci right 1.715125e-03	k: 3788	n:2280000
Cons ci ratio: 7.332727e-04	ci left: 9.257746e-01	ci right 9.264541e-01	k: 2111542	n:2280000
KS ci ratio: 1.202604e-01	ci left: 4.377737e-04	ci right 4.942094e-04	k: 1061	n:2280000
PBXIP1   2280000 perm   2346 sec   (972 perm/sec)   p_kst 4.653509e-04   p_cons 9.261149e-01   p_joint 1.661404e-03

Joint ci ratio: 6.352126e-02	ci left: 1.607515e-03	ci right 1.713402e-03	k: 3801	n:2290000
Cons ci ratio: 7.316912e-04	ci left: 9.257714e-01	ci right 9.264494e-01	k: 2120794	n:2290000
KS ci ratio: 1.202039e-01	ci left: 4.362855e-04	ci right 4.925012e-04	k: 1062	n:2290000
PBXIP1   2290000 perm   2365 sec   (968 perm/sec)   p_kst 4.637555e-04   p_cons 9.261109e-01   p_joint 1.659825e-03

Joint ci ratio: 6.339635e-02	ci left: 1.606944e-03	ci right 1.712578e-03	k: 3816	n:2300000
Cons ci ratio: 7.301896e-04	ci left: 9.257551e-01	ci right 9.264317e-01	k: 2130016	n:2300000
KS ci ratio: 1.199222e-01	ci left: 4.364973e-04	ci right 4.925990e-04	k: 1067	n:2300000
PBXIP1   2300000 perm   2384 sec   (965 perm/sec)   p_kst 4.639130e-04   p_cons 9.260939e-01   p_joint 1.659130e-03

Joint ci ratio: 6.325563e-02	ci left: 1.607230e-03	ci right 1.712640e-03	k: 3833	n:2310000
Cons ci ratio: 7.286234e-04	ci left: 9.257528e-01	ci right 9.264280e-01	k: 2139270	n:2310000
KS ci ratio: 1.195867e-01	ci left: 4.371273e-04	ci right 4.931417e-04	k: 1073	n:2310000
PBXIP1   2310000 perm   2402 sec   (962 perm/sec)   p_kst 4.645022e-04   p_cons 9.260909e-01   p_joint 1.659307e-03

Joint ci ratio: 6.314049e-02	ci left: 1.606242e-03	ci right 1.711388e-03	k: 3847	n:2320000
Cons ci ratio: 7.269344e-04	ci left: 9.257756e-01	ci right 9.264492e-01	k: 2148582	n:2320000
KS ci ratio: 1.194201e-01	ci left: 4.364976e-04	ci right 4.923478e-04	k: 1076	n:2320000
PBXIP1   2320000 perm   2421 sec   (958 perm/sec)   p_kst 4.637931e-04   p_cons 9.261129e-01   p_joint 1.658190e-03

Joint ci ratio: 6.306689e-02	ci left: 1.603150e-03	ci right 1.707966e-03	k: 3856	n:2330000
Cons ci ratio: 7.253594e-04	ci left: 9.257788e-01	ci right 9.264510e-01	k: 2157849	n:2330000
KS ci ratio: 1.193094e-01	ci left: 4.354569e-04	ci right 4.911188e-04	k: 1078	n:2330000
PBXIP1   2330000 perm   2440 sec   (955 perm/sec)   p_kst 4.626609e-04   p_cons 9.261155e-01   p_joint 1.654936e-03

Joint ci ratio: 6.293649e-02	ci left: 1.603028e-03	ci right 1.707613e-03	k: 3872	n:2340000
Cons ci ratio: 7.238059e-04	ci left: 9.257799e-01	ci right 9.264507e-01	k: 2167111	n:2340000
KS ci ratio: 1.191439e-01	ci left: 4.348398e-04	ci right 4.903402e-04	k: 1081	n:2340000
PBXIP1   2340000 perm   2459 sec   (952 perm/sec)   p_kst 4.619658e-04   p_cons 9.261158e-01   p_joint 1.654701e-03

Joint ci ratio: 6.279881e-02	ci left: 1.603327e-03	ci right 1.707694e-03	k: 3889	n:2350000
Cons ci ratio: 7.223050e-04	ci left: 9.257729e-01	ci right 9.264422e-01	k: 2176354	n:2350000
KS ci ratio: 1.189791e-01	ci left: 4.342280e-04	ci right 4.895683e-04	k: 1084	n:2350000
PBXIP1   2350000 perm   2479 sec   (948 perm/sec)   p_kst 4.612766e-04   p_cons 9.261081e-01   p_joint 1.654894e-03

Joint ci ratio: 6.267007e-02	ci left: 1.603207e-03	ci right 1.707344e-03	k: 3905	n:2360000
Cons ci ratio: 7.207175e-04	ci left: 9.257842e-01	ci right 9.264521e-01	k: 2185640	n:2360000
KS ci ratio: 1.187059e-01	ci left: 4.344437e-04	ci right 4.896755e-04	k: 1089	n:2360000
PBXIP1   2360000 perm   2498 sec   (945 perm/sec)   p_kst 4.614407e-04   p_cons 9.261186e-01   p_joint 1.654661e-03

Joint ci ratio: 6.258208e-02	ci left: 1.601011e-03	ci right 1.704854e-03	k: 3916	n:2370000
Cons ci ratio: 7.192246e-04	ci left: 9.257793e-01	ci right 9.264458e-01	k: 2194888	n:2370000
KS ci ratio: 1.186516e-01	ci left: 4.330200e-04	ci right 4.880438e-04	k: 1090	n:2370000
PBXIP1   2370000 perm   2518 sec   (941 perm/sec)   p_kst 4.599156e-04   p_cons 9.261131e-01   p_joint 1.652321e-03

Joint ci ratio: 6.244671e-02	ci left: 1.601315e-03	ci right 1.704945e-03	k: 3933	n:2380000
Cons ci ratio: 7.177630e-04	ci left: 9.257703e-01	ci right 9.264354e-01	k: 2204126	n:2380000
KS ci ratio: 1.185431e-01	ci left: 4.320160e-04	ci right 4.868585e-04	k: 1092	n:2380000
PBXIP1   2380000 perm   2538 sec   (938 perm/sec)   p_kst 4.588235e-04   p_cons 9.261034e-01   p_joint 1.652521e-03

Joint ci ratio: 6.235175e-02	ci left: 1.599558e-03	ci right 1.702911e-03	k: 3945	n:2390000
Cons ci ratio: 7.163803e-04	ci left: 9.257479e-01	ci right 9.264117e-01	k: 2213332	n:2390000
KS ci ratio: 1.183268e-01	ci left: 4.318324e-04	ci right 4.865446e-04	k: 1096	n:2390000
PBXIP1   2390000 perm   2557 sec   (935 perm/sec)   p_kst 4.585774e-04   p_cons 9.260803e-01   p_joint 1.650628e-03

Joint ci ratio: 6.221786e-02	ci left: 1.599866e-03	ci right 1.703009e-03	k: 3962	n:2400000
Cons ci ratio: 7.148010e-04	ci left: 9.257650e-01	ci right 9.264273e-01	k: 2222632	n:2400000
KS ci ratio: 1.180045e-01	ci left: 4.324592e-04	ci right 4.870912e-04	k: 1102	n:2400000
PBXIP1   2400000 perm   2576 sec   (932 perm/sec)   p_kst 4.591667e-04   p_cons 9.260967e-01   p_joint 1.650833e-03

Joint ci ratio: 6.210047e-02	ci left: 1.599355e-03	ci right 1.702264e-03	k: 3977	n:2410000
Cons ci ratio: 7.133315e-04	ci left: 9.257628e-01	ci right 9.264238e-01	k: 2231886	n:2410000
KS ci ratio: 1.177911e-01	ci left: 4.322756e-04	ci right 4.867787e-04	k: 1106	n:2410000
PBXIP1   2410000 perm   2596 sec   (928 perm/sec)   p_kst 4.589212e-04   p_cons 9.260938e-01   p_joint 1.650207e-03

Joint ci ratio: 6.197596e-02	ci left: 1.599255e-03	ci right 1.701944e-03	k: 3993	n:2420000
Cons ci ratio: 7.118238e-04	ci left: 9.257697e-01	ci right 9.264293e-01	k: 2241162	n:2420000
KS ci ratio: 1.176318e-01	ci left: 4.316925e-04	ci right 4.860434e-04	k: 1109	n:2420000
PBXIP1   2420000 perm   2615 sec   (925 perm/sec)   p_kst 4.582645e-04   p_cons 9.261000e-01   p_joint 1.650000e-03

Joint ci ratio: 6.181361e-02	ci left: 1.601182e-03	ci right 1.703715e-03	k: 4014	n:2430000
Cons ci ratio: 7.104110e-04	ci left: 9.257601e-01	ci right 9.264184e-01	k: 2250398	n:2430000
KS ci ratio: 1.174205e-01	ci left: 4.315137e-04	ci right 4.857377e-04	k: 1113	n:2430000
PBXIP1   2430000 perm   2635 sec   (922 perm/sec)   p_kst 4.580247e-04   p_cons 9.260897e-01   p_joint 1.651852e-03

Joint ci ratio: 6.168316e-02	ci left: 1.601479e-03	ci right 1.703808e-03	k: 4031	n:2440000
Cons ci ratio: 7.090278e-04	ci left: 9.257464e-01	ci right 9.264034e-01	k: 2259624	n:2440000
KS ci ratio: 1.172102e-01	ci left: 4.313364e-04	ci right 4.854344e-04	k: 1117	n:2440000
PBXIP1   2440000 perm   2654 sec   (919 perm/sec)   p_kst 4.577869e-04   p_cons 9.260754e-01   p_joint 1.652049e-03

Joint ci ratio: 6.159163e-02	ci left: 1.599765e-03	ci right 1.701827e-03	k: 4043	n:2450000
Cons ci ratio: 7.076210e-04	ci left: 9.257390e-01	ci right 9.263947e-01	k: 2268865	n:2450000
KS ci ratio: 1.170011e-01	ci left: 4.311607e-04	ci right 4.851335e-04	k: 1121	n:2450000
PBXIP1   2450000 perm   2674 sec   (916 perm/sec)   p_kst 4.575510e-04   p_cons 9.260673e-01   p_joint 1.650204e-03

Joint ci ratio: 6.149291e-02	ci left: 1.598465e-03	ci right 1.700275e-03	k: 4056	n:2460000
Cons ci ratio: 7.062225e-04	ci left: 9.257316e-01	ci right 9.263860e-01	k: 2278106	n:2460000
KS ci ratio: 1.166895e-01	ci left: 4.317758e-04	ci right 4.856717e-04	k: 1127	n:2460000
PBXIP1   2460000 perm   2693 sec   (913 perm/sec)   p_kst 4.581301e-04   p_cons 9.260593e-01   p_joint 1.648780e-03

Joint ci ratio: 6.137957e-02	ci left: 1.597973e-03	ci right 1.699557e-03	k: 4071	n:2470000
Cons ci ratio: 7.048031e-04	ci left: 9.257300e-01	ci right 9.263831e-01	k: 2287361	n:2470000
KS ci ratio: 1.164317e-01	ci left: 4.319930e-04	ci right 4.857887e-04	k: 1132	n:2470000
PBXIP1   2470000 perm   2713 sec   (910 perm/sec)   p_kst 4.582996e-04   p_cons 9.260571e-01   p_joint 1.648178e-03

Joint ci ratio: 6.125183e-02	ci left: 1.598280e-03	ci right 1.699664e-03	k: 4088	n:2480000
Cons ci ratio: 7.034005e-04	ci left: 9.257268e-01	ci right 9.263786e-01	k: 2296612	n:2480000
KS ci ratio: 1.161757e-01	ci left: 4.322085e-04	ci right 4.859046e-04	k: 1137	n:2480000
PBXIP1   2480000 perm   2733 sec   (907 perm/sec)   p_kst 4.584677e-04   p_cons 9.260532e-01   p_joint 1.648387e-03

Joint ci ratio: 6.113981e-02	ci left: 1.597793e-03	ci right 1.698954e-03	k: 4103	n:2490000
Cons ci ratio: 7.020495e-04	ci left: 9.257152e-01	ci right 9.263657e-01	k: 2305842	n:2490000
KS ci ratio: 1.158199e-01	ci left: 4.332025e-04	ci right 4.868459e-04	k: 1144	n:2490000
PBXIP1   2490000 perm   2754 sec   (904 perm/sec)   p_kst 4.594378e-04   p_cons 9.260410e-01   p_joint 1.647791e-03

Joint ci ratio: 6.098393e-02	ci left: 1.599673e-03	ci right 1.700687e-03	k: 4124	n:2500000
Cons ci ratio: 7.006367e-04	ci left: 9.257173e-01	ci right 9.263665e-01	k: 2315106	n:2500000
KS ci ratio: 1.154675e-01	ci left: 4.341887e-04	ci right 4.877795e-04	k: 1151	n:2500000
PBXIP1   2500000 perm   2774 sec   (901 perm/sec)   p_kst 4.604000e-04   p_cons 9.260424e-01   p_joint 1.649600e-03

Joint ci ratio: 6.086601e-02	ci left: 1.599577e-03	ci right 1.700383e-03	k: 4140	n:2510000
Cons ci ratio: 6.992425e-04	ci left: 9.257174e-01	ci right 9.263653e-01	k: 2324365	n:2510000
KS ci ratio: 1.153175e-01	ci left: 4.336195e-04	ci right 4.870659e-04	k: 1154	n:2510000
PBXIP1   2510000 perm   2794 sec   (898 perm/sec)   p_kst 4.597610e-04   p_cons 9.260418e-01   p_joint 1.649402e-03

Joint ci ratio: 6.071951e-02	ci left: 1.601046e-03	ci right 1.701692e-03	k: 4160	n:2520000
Cons ci ratio: 6.978404e-04	ci left: 9.257206e-01	ci right 9.263673e-01	k: 2333632	n:2520000
KS ci ratio: 1.151680e-01	ci left: 4.330550e-04	ci right 4.863578e-04	k: 1157	n:2520000
PBXIP1   2520000 perm   2814 sec   (895 perm/sec)   p_kst 4.591270e-04   p_cons 9.260444e-01   p_joint 1.650794e-03

Joint ci ratio: 6.061038e-02	ci left: 1.600557e-03	ci right 1.700985e-03	k: 4175	n:2530000
Cons ci ratio: 6.964688e-04	ci left: 9.257195e-01	ci right 9.263649e-01	k: 2342888	n:2530000
KS ci ratio: 1.149696e-01	ci left: 4.328788e-04	ci right 4.860620e-04	k: 1161	n:2530000
PBXIP1   2530000 perm   2834 sec   (893 perm/sec)   p_kst 4.588933e-04   p_cons 9.260427e-01   p_joint 1.650198e-03

Joint ci ratio: 6.049461e-02	ci left: 1.600459e-03	ci right 1.700683e-03	k: 4191	n:2540000
Cons ci ratio: 6.952132e-04	ci left: 9.256971e-01	ci right 9.263413e-01	k: 2352090	n:2540000
KS ci ratio: 1.147231e-01	ci left: 4.330865e-04	ci right 4.861734e-04	k: 1166	n:2540000
PBXIP1   2540000 perm   2855 sec   (890 perm/sec)   p_kst 4.590551e-04   p_cons 9.260197e-01   p_joint 1.650000e-03

Joint ci ratio: 6.037231e-02	ci left: 1.600749e-03	ci right 1.700781e-03	k: 4208	n:2550000
Cons ci ratio: 6.937577e-04	ci left: 9.257158e-01	ci right 9.263586e-01	k: 2361396	n:2550000
KS ci ratio: 1.143805e-01	ci left: 4.340546e-04	ci right 4.870905e-04	k: 1173	n:2550000
PBXIP1   2550000 perm   2876 sec   (887 perm/sec)   p_kst 4.600000e-04   p_cons 9.260376e-01   p_joint 1.650196e-03

Joint ci ratio: 6.028649e-02	ci left: 1.599112e-03	ci right 1.698895e-03	k: 4220	n:2560000
Cons ci ratio: 6.924199e-04	ci left: 9.257127e-01	ci right 9.263543e-01	k: 2370647	n:2560000
KS ci ratio: 1.142832e-01	ci left: 4.331180e-04	ci right 4.859914e-04	k: 1175	n:2560000
PBXIP1   2560000 perm   2896 sec   (884 perm/sec)   p_kst 4.589844e-04   p_cons 9.260340e-01   p_joint 1.648437e-03

Joint ci ratio: 6.018679e-02	ci left: 1.598256e-03	ci right 1.697814e-03	k: 4234	n:2570000
Cons ci ratio: 6.910839e-04	ci left: 9.257109e-01	ci right 9.263512e-01	k: 2379901	n:2570000
KS ci ratio: 1.141862e-01	ci left: 4.321887e-04	ci right 4.849009e-04	k: 1177	n:2570000
PBXIP1   2570000 perm   2917 sec   (881 perm/sec)   p_kst 4.579767e-04   p_cons 9.260315e-01   p_joint 1.647471e-03

Joint ci ratio: 6.008758e-02	ci left: 1.597406e-03	ci right 1.696742e-03	k: 4248	n:2580000
Cons ci ratio: 6.898083e-04	ci left: 9.256986e-01	ci right 9.263377e-01	k: 2389128	n:2580000
KS ci ratio: 1.139929e-01	ci left: 4.320197e-04	ci right 4.846160e-04	k: 1181	n:2580000
PBXIP1   2580000 perm   2938 sec   (878 perm/sec)   p_kst 4.577519e-04   p_cons 9.260186e-01   p_joint 1.646512e-03

Joint ci ratio: 5.998181e-02	ci left: 1.596943e-03	ci right 1.696069e-03	k: 4263	n:2590000
Cons ci ratio: 6.884505e-04	ci left: 9.257041e-01	ci right 9.263420e-01	k: 2398401	n:2590000
KS ci ratio: 1.138005e-01	ci left: 4.318520e-04	ci right 4.843333e-04	k: 1185	n:2590000
PBXIP1   2590000 perm   2958 sec   (875 perm/sec)   p_kst 4.575290e-04   p_cons 9.260236e-01   p_joint 1.645946e-03

Joint ci ratio: 5.989063e-02	ci left: 1.595725e-03	ci right 1.694621e-03	k: 4276	n:2600000
Cons ci ratio: 6.872144e-04	ci left: 9.256869e-01	ci right 9.263237e-01	k: 2407615	n:2600000
KS ci ratio: 1.135614e-01	ci left: 4.320595e-04	ci right 4.844482e-04	k: 1190	n:2600000
PBXIP1   2600000 perm   2979 sec   (873 perm/sec)   p_kst 4.576923e-04   p_cons 9.260058e-01   p_joint 1.644615e-03

Joint ci ratio: 5.977195e-02	ci left: 1.596028e-03	ci right 1.694739e-03	k: 4293	n:2610000
Cons ci ratio: 6.858737e-04	ci left: 9.256921e-01	ci right 9.263276e-01	k: 2416887	n:2610000
KS ci ratio: 1.134186e-01	ci left: 4.315209e-04	ci right 4.837741e-04	k: 1193	n:2610000
PBXIP1   2610000 perm   3000 sec   (870 perm/sec)   p_kst 4.570881e-04   p_cons 9.260103e-01   p_joint 1.644828e-03

Joint ci ratio: 5.967478e-02	ci left: 1.595200e-03	ci right 1.693693e-03	k: 4307	n:2620000
Cons ci ratio: 6.845466e-04	ci left: 9.256961e-01	ci right 9.263304e-01	k: 2426156	n:2620000
KS ci ratio: 1.131819e-01	ci left: 4.317281e-04	ci right 4.838901e-04	k: 1198	n:2620000
PBXIP1   2620000 perm   3021 sec   (867 perm/sec)   p_kst 4.572519e-04   p_cons 9.260137e-01   p_joint 1.643893e-03

Joint ci ratio: 5.956427e-02	ci left: 1.595127e-03	ci right 1.693428e-03	k: 4323	n:2630000
Cons ci ratio: 6.832537e-04	ci left: 9.256948e-01	ci right 9.263279e-01	k: 2435411	n:2630000
KS ci ratio: 1.127594e-01	ci left: 4.334120e-04	ci right 4.855689e-04	k: 1207	n:2630000
PBXIP1   2630000 perm   3041 sec   (865 perm/sec)   p_kst 4.589354e-04   p_cons 9.260118e-01   p_joint 1.643726e-03

Joint ci ratio: 5.945438e-02	ci left: 1.595055e-03	ci right 1.693164e-03	k: 4339	n:2640000
Cons ci ratio: 6.819567e-04	ci left: 9.256957e-01	ci right 9.263276e-01	k: 2444672	n:2640000
KS ci ratio: 1.125268e-01	ci left: 4.336108e-04	ci right 4.856769e-04	k: 1212	n:2640000
PBXIP1   2640000 perm   3062 sec   (862 perm/sec)   p_kst 4.590909e-04   p_cons 9.260121e-01   p_joint 1.643561e-03

Joint ci ratio: 5.935192e-02	ci left: 1.594613e-03	ci right 1.692519e-03	k: 4354	n:2650000
Cons ci ratio: 6.807365e-04	ci left: 9.256827e-01	ci right 9.263134e-01	k: 2453896	n:2650000
KS ci ratio: 1.122955e-01	ci left: 4.338083e-04	ci right 4.857840e-04	k: 1217	n:2650000
PBXIP1   2650000 perm   3083 sec   (859 perm/sec)   p_kst 4.592453e-04   p_cons 9.259985e-01   p_joint 1.643019e-03

Joint ci ratio: 5.924319e-02	ci left: 1.594544e-03	ci right 1.692261e-03	k: 4370	n:2660000
Cons ci ratio: 6.794799e-04	ci left: 9.256784e-01	ci right 9.263079e-01	k: 2463143	n:2660000
KS ci ratio: 1.120657e-01	ci left: 4.340044e-04	ci right 4.858901e-04	k: 1222	n:2660000
PBXIP1   2660000 perm   3104 sec   (857 perm/sec)   p_kst 4.593985e-04   p_cons 9.259936e-01   p_joint 1.642857e-03

Joint ci ratio: 5.912832e-02	ci left: 1.594844e-03	ci right 1.692384e-03	k: 4387	n:2670000
Cons ci ratio: 6.783026e-04	ci left: 9.256595e-01	ci right 9.262879e-01	k: 2472351	n:2670000
KS ci ratio: 1.117918e-01	ci left: 4.345632e-04	ci right 4.863804e-04	k: 1228	n:2670000
PBXIP1   2670000 perm   3126 sec   (854 perm/sec)   p_kst 4.599251e-04   p_cons 9.259742e-01   p_joint 1.643071e-03

Joint ci ratio: 5.902082e-02	ci left: 1.594775e-03	ci right 1.692127e-03	k: 4403	n:2680000
Cons ci ratio: 6.770538e-04	ci left: 9.256564e-01	ci right 9.262837e-01	k: 2481601	n:2680000
KS ci ratio: 1.117465e-01	ci left: 4.333044e-04	ci right 4.849491e-04	k: 1229	n:2680000
PBXIP1   2680000 perm   3147 sec   (851 perm/sec)   p_kst 4.585821e-04   p_cons 9.259705e-01   p_joint 1.642910e-03

Joint ci ratio: 5.892725e-02	ci left: 1.593975e-03	ci right 1.691118e-03	k: 4417	n:2690000
Cons ci ratio: 6.757991e-04	ci left: 9.256560e-01	ci right 9.262821e-01	k: 2490858	n:2690000
KS ci ratio: 1.115200e-01	ci left: 4.335005e-04	ci right 4.850569e-04	k: 1234	n:2690000
PBXIP1   2690000 perm   3169 sec   (849 perm/sec)   p_kst 4.587361e-04   p_cons 9.259695e-01   p_joint 1.642007e-03

Joint ci ratio: 5.880756e-02	ci left: 1.594640e-03	ci right 1.691619e-03	k: 4435	n:2700000
Cons ci ratio: 6.745751e-04	ci left: 9.256508e-01	ci right 9.262757e-01	k: 2500102	n:2700000
KS ci ratio: 1.111605e-01	ci left: 4.347754e-04	ci right 4.863059e-04	k: 1242	n:2700000
PBXIP1   2700000 perm   3190 sec   (846 perm/sec)   p_kst 4.600000e-04   p_cons 9.259637e-01   p_joint 1.642593e-03

Joint ci ratio: 5.874146e-02	ci left: 1.592391e-03	ci right 1.689122e-03	k: 4445	n:2710000
Cons ci ratio: 6.732671e-04	ci left: 9.256640e-01	ci right 9.262878e-01	k: 2509396	n:2710000
KS ci ratio: 1.110266e-01	ci left: 4.342473e-04	ci right 4.856491e-04	k: 1245	n:2710000
PBXIP1   2710000 perm   3212 sec   (844 perm/sec)   p_kst 4.594096e-04   p_cons 9.259764e-01   p_joint 1.640221e-03

Joint ci ratio: 5.862947e-02	ci left: 1.592695e-03	ci right 1.689253e-03	k: 4462	n:2720000
Cons ci ratio: 6.721126e-04	ci left: 9.256474e-01	ci right 9.262701e-01	k: 2518609	n:2720000
KS ci ratio: 1.108045e-01	ci left: 4.344380e-04	ci right 4.857529e-04	k: 1250	n:2720000
PBXIP1   2720000 perm   3233 sec   (841 perm/sec)   p_kst 4.595588e-04   p_cons 9.259592e-01   p_joint 1.640441e-03

Joint ci ratio: 5.851158e-02	ci left: 1.593358e-03	ci right 1.689756e-03	k: 4480	n:2730000
Cons ci ratio: 6.709227e-04	ci left: 9.256393e-01	ci right 9.262609e-01	k: 2527845	n:2730000
KS ci ratio: 1.104958e-01	ci left: 4.353398e-04	ci right 4.866086e-04	k: 1257	n:2730000
PBXIP1   2730000 perm   3254 sec   (839 perm/sec)   p_kst 4.604396e-04   p_cons 9.259505e-01   p_joint 1.641026e-03

Joint ci ratio: 5.844647e-02	ci left: 1.591139e-03	ci right 1.687292e-03	k: 4490	n:2740000
Cons ci ratio: 6.697535e-04	ci left: 9.256283e-01	ci right 9.262489e-01	k: 2537073	n:2740000
KS ci ratio: 1.102768e-01	ci left: 4.355254e-04	ci right 4.867078e-04	k: 1262	n:2740000
PBXIP1   2740000 perm   3276 sec   (836 perm/sec)   p_kst 4.605839e-04   p_cons 9.259391e-01   p_joint 1.638686e-03

Joint ci ratio: 5.837508e-02	ci left: 1.589294e-03	ci right 1.685214e-03	k: 4501	n:2750000
Cons ci ratio: 6.685318e-04	ci left: 9.256295e-01	ci right 9.262489e-01	k: 2546334	n:2750000
KS ci ratio: 1.101897e-01	ci left: 4.346489e-04	ci right 4.856853e-04	k: 1264	n:2750000
PBXIP1   2750000 perm   3298 sec   (834 perm/sec)   p_kst 4.596364e-04   p_cons 9.259396e-01   p_joint 1.636727e-03

Joint ci ratio: 5.827808e-02	ci left: 1.588892e-03	ci right 1.684623e-03	k: 4516	n:2760000
Cons ci ratio: 6.673502e-04	ci left: 9.256238e-01	ci right 9.262420e-01	k: 2555576	n:2760000
KS ci ratio: 1.100593e-01	ci left: 4.341311e-04	ci right 4.850425e-04	k: 1267	n:2760000
PBXIP1   2760000 perm   3320 sec   (831 perm/sec)   p_kst 4.590580e-04   p_cons 9.259333e-01   p_joint 1.636232e-03

Joint ci ratio: 5.820087e-02	ci left: 1.587425e-03	ci right 1.682936e-03	k: 4528	n:2770000
Cons ci ratio: 6.661363e-04	ci left: 9.256260e-01	ci right 9.262431e-01	k: 2564840	n:2770000
KS ci ratio: 1.098861e-01	ci left: 4.339682e-04	ci right 4.847752e-04	k: 1271	n:2770000
PBXIP1   2770000 perm   3342 sec   (829 perm/sec)   p_kst 4.588448e-04   p_cons 9.259350e-01   p_joint 1.634657e-03

Joint ci ratio: 5.811115e-02	ci left: 1.586677e-03	ci right 1.681992e-03	k: 4542	n:2780000
Cons ci ratio: 6.649849e-04	ci left: 9.256167e-01	ci right 9.262328e-01	k: 2574072	n:2780000
KS ci ratio: 1.097998e-01	ci left: 4.331068e-04	ci right 4.837706e-04	k: 1273	n:2780000
PBXIP1   2780000 perm   3364 sec   (826 perm/sec)   p_kst 4.579137e-04   p_cons 9.259252e-01   p_joint 1.633813e-03

Joint ci ratio: 5.802184e-02	ci left: 1.585935e-03	ci right 1.681054e-03	k: 4556	n:2790000
Cons ci ratio: 6.638653e-04	ci left: 9.256021e-01	ci right 9.262171e-01	k: 2583289	n:2790000
KS ci ratio: 1.095850e-01	ci left: 4.332974e-04	ci right 4.838779e-04	k: 1278	n:2790000
PBXIP1   2790000 perm   3386 sec   (824 perm/sec)   p_kst 4.580645e-04   p_cons 9.259100e-01   p_joint 1.632975e-03

Joint ci ratio: 5.789490e-02	ci left: 1.587311e-03	ci right 1.682296e-03	k: 4576	n:2800000
Cons ci ratio: 6.626893e-04	ci left: 9.256004e-01	ci right 9.262144e-01	k: 2592542	n:2800000
KS ci ratio: 1.092438e-01	ci left: 4.345289e-04	ci right 4.850850e-04	k: 1286	n:2800000
PBXIP1   2800000 perm   3409 sec   (821 perm/sec)   p_kst 4.592857e-04   p_cons 9.259079e-01   p_joint 1.634286e-03

Joint ci ratio: 5.780028e-02	ci left: 1.586923e-03	ci right 1.681725e-03	k: 4591	n:2810000
Cons ci ratio: 6.614801e-04	ci left: 9.256070e-01	ci right 9.262198e-01	k: 2601818	n:2810000
KS ci ratio: 1.090322e-01	ci left: 4.347133e-04	ci right 4.851866e-04	k: 1291	n:2810000
PBXIP1   2810000 perm   3432 sec   (819 perm/sec)   p_kst 4.594306e-04   p_cons 9.259139e-01   p_joint 1.633808e-03

Joint ci ratio: 5.770612e-02	ci left: 1.586538e-03	ci right 1.681157e-03	k: 4606	n:2820000
Cons ci ratio: 6.603030e-04	ci left: 9.256082e-01	ci right 9.262200e-01	k: 2611079	n:2820000
KS ci ratio: 1.087380e-01	ci left: 4.355864e-04	ci right 4.860160e-04	k: 1298	n:2820000
PBXIP1   2820000 perm   3455 sec   (816 perm/sec)   p_kst 4.602837e-04   p_cons 9.259145e-01   p_joint 1.633333e-03

Joint ci ratio: 5.756877e-02	ci left: 1.588593e-03	ci right 1.683103e-03	k: 4628	n:2830000
Cons ci ratio: 6.591305e-04	ci left: 9.256098e-01	ci right 9.262204e-01	k: 2620341	n:2830000
KS ci ratio: 1.084877e-01	ci left: 4.361098e-04	ci right 4.864763e-04	k: 1304	n:2830000
PBXIP1   2830000 perm   3477 sec   (814 perm/sec)   p_kst 4.607774e-04   p_cons 9.259155e-01   p_joint 1.635336e-03

Joint ci ratio: 5.746953e-02	ci left: 1.588552e-03	ci right 1.682891e-03	k: 4644	n:2840000
Cons ci ratio: 6.580014e-04	ci left: 9.256036e-01	ci right 9.262132e-01	k: 2629581	n:2840000
KS ci ratio: 1.082392e-01	ci left: 4.366296e-04	ci right 4.869333e-04	k: 1310	n:2840000
PBXIP1   2840000 perm   3500 sec   (811 perm/sec)   p_kst 4.612676e-04   p_cons 9.259088e-01   p_joint 1.635211e-03

Joint ci ratio: 5.735849e-02	ci left: 1.589204e-03	ci right 1.683393e-03	k: 4662	n:2850000
Cons ci ratio: 6.568025e-04	ci left: 9.256132e-01	ci right 9.262217e-01	k: 2638866	n:2850000
KS ci ratio: 1.080744e-01	ci left: 4.364631e-04	ci right 4.866662e-04	k: 1314	n:2850000
PBXIP1   2850000 perm   3524 sec   (809 perm/sec)   p_kst 4.610526e-04   p_cons 9.259179e-01   p_joint 1.635789e-03

Joint ci ratio: 5.727874e-02	ci left: 1.588127e-03	ci right 1.682117e-03	k: 4675	n:2860000
Cons ci ratio: 6.557304e-04	ci left: 9.255976e-01	ci right 9.262051e-01	k: 2648079	n:2860000
KS ci ratio: 1.077879e-01	ci left: 4.373185e-04	ci right 4.874781e-04	k: 1321	n:2860000
PBXIP1   2860000 perm   3547 sec   (806 perm/sec)   p_kst 4.618881e-04   p_cons 9.259017e-01   p_joint 1.634615e-03

Joint ci ratio: 5.723600e-02	ci left: 1.584998e-03	ci right 1.678730e-03	k: 4682	n:2870000
Cons ci ratio: 6.545604e-04	ci left: 9.256037e-01	ci right 9.262101e-01	k: 2657354	n:2870000
KS ci ratio: 1.077065e-01	ci left: 4.364728e-04	ci right 4.864953e-04	k: 1323	n:2870000
PBXIP1   2870000 perm   3570 sec   (804 perm/sec)   p_kst 4.609756e-04   p_cons 9.259073e-01   p_joint 1.631359e-03

Joint ci ratio: 5.715066e-02	ci left: 1.584286e-03	ci right 1.677832e-03	k: 4696	n:2880000
Cons ci ratio: 6.533405e-04	ci left: 9.256216e-01	ci right 9.262269e-01	k: 2666663	n:2880000
KS ci ratio: 1.075037e-01	ci left: 4.366467e-04	ci right 4.865889e-04	k: 1328	n:2880000
PBXIP1   2880000 perm   3594 sec   (801 perm/sec)   p_kst 4.611111e-04   p_cons 9.259247e-01   p_joint 1.630556e-03

Joint ci ratio: 5.705357e-02	ci left: 1.584261e-03	ci right 1.677642e-03	k: 4712	n:2890000
Cons ci ratio: 6.521108e-04	ci left: 9.256428e-01	ci right 9.262470e-01	k: 2675982	n:2890000
KS ci ratio: 1.073826e-01	ci left: 4.361460e-04	ci right 4.859711e-04	k: 1331	n:2890000
PBXIP1   2890000 perm   3617 sec   (799 perm/sec)   p_kst 4.605536e-04   p_cons 9.259453e-01   p_joint 1.630450e-03

Joint ci ratio: 5.697508e-02	ci left: 1.583217e-03	ci right 1.676403e-03	k: 4725	n:2900000
Cons ci ratio: 6.509863e-04	ci left: 9.256432e-01	ci right 9.262463e-01	k: 2685241	n:2900000
KS ci ratio: 1.071415e-01	ci left: 4.366555e-04	ci right 4.864198e-04	k: 1337	n:2900000
PBXIP1   2900000 perm   3641 sec   (797 perm/sec)   p_kst 4.610345e-04   p_cons 9.259452e-01   p_joint 1.629310e-03

Joint ci ratio: 5.689692e-02	ci left: 1.582180e-03	ci right 1.675173e-03	k: 4738	n:2910000
Cons ci ratio: 6.497958e-04	ci left: 9.256587e-01	ci right 9.262607e-01	k: 2694544	n:2910000
KS ci ratio: 1.069419e-01	ci left: 4.368272e-04	ci right 4.865124e-04	k: 1342	n:2910000
PBXIP1   2910000 perm   3665 sec   (794 perm/sec)   p_kst 4.611684e-04   p_cons 9.259601e-01   p_joint 1.628179e-03

Joint ci ratio: 5.680710e-02	ci left: 1.581826e-03	ci right 1.674647e-03	k: 4753	n:2920000
Cons ci ratio: 6.486978e-04	ci left: 9.256559e-01	ci right 9.262569e-01	k: 2703794	n:2920000
KS ci ratio: 1.067830e-01	ci left: 4.366644e-04	ci right 4.862528e-04	k: 1346	n:2920000
PBXIP1   2920000 perm   3688 sec   (792 perm/sec)   p_kst 4.609589e-04   p_cons 9.259568e-01   p_joint 1.627740e-03

Joint ci ratio: 5.673558e-02	ci left: 1.580464e-03	ci right 1.673085e-03	k: 4765	n:2930000
Cons ci ratio: 6.476488e-04	ci left: 9.256439e-01	ci right 9.262440e-01	k: 2713017	n:2930000
KS ci ratio: 1.066643e-01	ci left: 4.361707e-04	ci right 4.856444e-04	k: 1349	n:2930000
PBXIP1   2930000 perm   3712 sec   (789 perm/sec)   p_kst 4.604096e-04   p_cons 9.259444e-01   p_joint 1.626280e-03

Joint ci ratio: 5.662280e-02	ci left: 1.581460e-03	ci right 1.673948e-03	k: 4784	n:2940000
Cons ci ratio: 6.466000e-04	ci left: 9.256331e-01	ci right 9.262321e-01	k: 2722243	n:2940000
KS ci ratio: 1.063496e-01	ci left: 4.373357e-04	ci right 4.867861e-04	k: 1357	n:2940000
PBXIP1   2940000 perm   3736 sec   (787 perm/sec)   p_kst 4.615646e-04   p_cons 9.259330e-01   p_joint 1.627211e-03

Joint ci ratio: 5.654017e-02	ci left: 1.580777e-03	ci right 1.673087e-03	k: 4798	n:2950000
Cons ci ratio: 6.455212e-04	ci left: 9.256297e-01	ci right 9.262278e-01	k: 2731491	n:2950000
KS ci ratio: 1.062714e-01	ci left: 4.365131e-04	ci right 4.858320e-04	k: 1359	n:2950000
PBXIP1   2950000 perm   3759 sec   (785 perm/sec)   p_kst 4.606780e-04   p_cons 9.259292e-01   p_joint 1.626441e-03

Joint ci ratio: 5.646377e-02	ci left: 1.579767e-03	ci right 1.671888e-03	k: 4811	n:2960000
Cons ci ratio: 6.444272e-04	ci left: 9.256308e-01	ci right 9.262278e-01	k: 2740752	n:2960000
KS ci ratio: 1.060377e-01	ci left: 4.370117e-04	ci right 4.862715e-04	k: 1365	n:2960000
PBXIP1   2960000 perm   3783 sec   (783 perm/sec)   p_kst 4.611486e-04   p_cons 9.259297e-01   p_joint 1.625338e-03

Joint ci ratio: 5.638183e-02	ci left: 1.579095e-03	ci right 1.671039e-03	k: 4825	n:2970000
Cons ci ratio: 6.432976e-04	ci left: 9.256407e-01	ci right 9.262366e-01	k: 2750039	n:2970000
KS ci ratio: 1.058056e-01	ci left: 4.375069e-04	ci right 4.867079e-04	k: 1371	n:2970000
PBXIP1   2970000 perm   3806 sec   (780 perm/sec)   p_kst 4.616162e-04   p_cons 9.259391e-01   p_joint 1.624579e-03

Joint ci ratio: 5.624209e-02	ci left: 1.581736e-03	ci right 1.673599e-03	k: 4849	n:2980000
Cons ci ratio: 6.422227e-04	ci left: 9.256400e-01	ci right 9.262350e-01	k: 2759295	n:2980000
KS ci ratio: 1.056133e-01	ci left: 4.376723e-04	ci right 4.867968e-04	k: 1376	n:2980000
PBXIP1   2980000 perm   3830 sec   (778 perm/sec)   p_kst 4.617450e-04   p_cons 9.259379e-01   p_joint 1.627181e-03

Joint ci ratio: 5.618425e-02	ci left: 1.579744e-03	ci right 1.671393e-03	k: 4859	n:2990000
Cons ci ratio: 6.411062e-04	ci left: 9.256494e-01	ci right 9.262434e-01	k: 2768581	n:2990000
KS ci ratio: 1.054603e-01	ci left: 4.375110e-04	ci right 4.865418e-04	k: 1380	n:2990000
PBXIP1   2990000 perm   3853 sec   (776 perm/sec)   p_kst 4.615385e-04   p_cons 9.259468e-01   p_joint 1.625084e-03

Joint ci ratio: 5.611506e-02	ci left: 1.578422e-03	ci right 1.669878e-03	k: 4871	n:3000000
Cons ci ratio: 6.399597e-04	ci left: 9.256665e-01	ci right 9.262594e-01	k: 2777890	n:3000000
KS ci ratio: 1.052699e-01	ci left: 4.376753e-04	ci right 4.866306e-04	k: 1385	n:3000000
PBXIP1   3000000 perm   3877 sec   (774 perm/sec)   p_kst 4.616667e-04   p_cons 9.259633e-01   p_joint 1.623667e-03

Joint ci ratio: 5.600593e-02	ci left: 1.579402e-03	ci right 1.670731e-03	k: 4890	n:3010000
Cons ci ratio: 6.389432e-04	ci left: 9.256568e-01	ci right 9.262487e-01	k: 2787119	n:3010000
KS ci ratio: 1.051183e-01	ci left: 4.375152e-04	ci right 4.863777e-04	k: 1389	n:3010000
PBXIP1   3010000 perm   3901 sec   (772 perm/sec)   p_kst 4.614618e-04   p_cons 9.259532e-01   p_joint 1.624585e-03

Joint ci ratio: 5.593168e-02	ci left: 1.578416e-03	ci right 1.669564e-03	k: 4903	n:3020000
Cons ci ratio: 6.378576e-04	ci left: 9.256631e-01	ci right 9.262540e-01	k: 2796396	n:3020000
KS ci ratio: 1.049674e-01	ci left: 4.373562e-04	ci right 4.861265e-04	k: 1393	n:3020000
PBXIP1   3020000 perm   3924 sec   (770 perm/sec)   p_kst 4.612583e-04   p_cons 9.259589e-01   p_joint 1.623510e-03

Joint ci ratio: 5.584635e-02	ci left: 1.578088e-03	ci right 1.669073e-03	k: 4918	n:3030000
Cons ci ratio: 6.367805e-04	ci left: 9.256686e-01	ci right 9.262586e-01	k: 2805671	n:3030000
KS ci ratio: 1.047422e-01	ci left: 4.378411e-04	ci right 4.865542e-04	k: 1399	n:3030000
PBXIP1   3030000 perm   3949 sec   (767 perm/sec)   p_kst 4.617162e-04   p_cons 9.259640e-01   p_joint 1.623102e-03

Joint ci ratio: 5.575009e-02	ci left: 1.578411e-03	ci right 1.669253e-03	k: 4935	n:3040000
Cons ci ratio: 6.357699e-04	ci left: 9.256610e-01	ci right 9.262500e-01	k: 2814906	n:3040000
KS ci ratio: 1.046302e-01	ci left: 4.373618e-04	ci right 4.859664e-04	k: 1402	n:3040000
PBXIP1   3040000 perm   3972 sec   (765 perm/sec)   p_kst 4.611842e-04   p_cons 9.259559e-01   p_joint 1.623355e-03

Joint ci ratio: 5.569940e-02	ci left: 1.576146e-03	ci right 1.666772e-03	k: 4944	n:3050000
Cons ci ratio: 6.347838e-04	ci left: 9.256492e-01	ci right 9.262372e-01	k: 2824128	n:3050000
KS ci ratio: 1.045557e-01	ci left: 4.365664e-04	ci right 4.850460e-04	k: 1404	n:3050000
PBXIP1   3050000 perm   3996 sec   (763 perm/sec)   p_kst 4.603279e-04   p_cons 9.259436e-01   p_joint 1.620984e-03

Joint ci ratio: 5.561512e-02	ci left: 1.575829e-03	ci right 1.666295e-03	k: 4959	n:3060000
Cons ci ratio: 6.337026e-04	ci left: 9.256590e-01	ci right 9.262461e-01	k: 2833416	n:3060000
KS ci ratio: 1.042962e-01	ci left: 4.373675e-04	ci right 4.858081e-04	k: 1411	n:3060000
PBXIP1   3060000 perm   4020 sec   (761 perm/sec)   p_kst 4.611111e-04   p_cons 9.259529e-01   p_joint 1.620588e-03

Joint ci ratio: 5.553682e-02	ci left: 1.575193e-03	ci right 1.665491e-03	k: 4973	n:3070000
Cons ci ratio: 6.327381e-04	ci left: 9.256446e-01	ci right 9.262308e-01	k: 2842630	n:3070000
KS ci ratio: 1.041120e-01	ci left: 4.375291e-04	ci right 4.858968e-04	k: 1416	n:3070000
PBXIP1   3070000 perm   4044 sec   (759 perm/sec)   p_kst 4.612378e-04   p_cons 9.259381e-01   p_joint 1.619870e-03

Joint ci ratio: 5.546999e-02	ci left: 1.573920e-03	ci right 1.664034e-03	k: 4985	n:3080000
Cons ci ratio: 6.317674e-04	ci left: 9.256326e-01	ci right 9.262179e-01	k: 2851851	n:3080000
KS ci ratio: 1.038923e-01	ci left: 4.380060e-04	ci right 4.863179e-04	k: 1422	n:3080000
PBXIP1   3080000 perm   4069 sec   (757 perm/sec)   p_kst 4.616883e-04   p_cons 9.259256e-01   p_joint 1.618506e-03

Joint ci ratio: 5.534243e-02	ci left: 1.576167e-03	ci right 1.666195e-03	k: 5008	n:3090000
Cons ci ratio: 6.308221e-04	ci left: 9.256161e-01	ci right 9.262005e-01	k: 2861058	n:3090000
KS ci ratio: 1.037829e-01	ci left: 4.375341e-04	ci right 4.857402e-04	k: 1425	n:3090000
PBXIP1   3090000 perm   4093 sec   (755 perm/sec)   p_kst 4.611650e-04   p_cons 9.259087e-01   p_joint 1.620712e-03

Joint ci ratio: 5.522674e-02	ci left: 1.577763e-03	ci right 1.667688e-03	k: 5029	n:3100000
Cons ci ratio: 6.297743e-04	ci left: 9.256230e-01	ci right 9.262065e-01	k: 2870337	n:3100000
KS ci ratio: 1.036377e-01	ci left: 4.373796e-04	ci right 4.854970e-04	k: 1429	n:3100000
PBXIP1   3100000 perm   4117 sec   (753 perm/sec)   p_kst 4.609677e-04   p_cons 9.259152e-01   p_joint 1.622258e-03

Joint ci ratio: 5.513911e-02	ci left: 1.577764e-03	ci right 1.667541e-03	k: 5045	n:3110000
Cons ci ratio: 6.287303e-04	ci left: 9.256302e-01	ci right 9.262127e-01	k: 2879617	n:3110000
KS ci ratio: 1.033849e-01	ci left: 4.381657e-04	ci right 4.862450e-04	k: 1436	n:3110000
PBXIP1   3110000 perm   4142 sec   (751 perm/sec)   p_kst 4.617363e-04   p_cons 9.259219e-01   p_joint 1.622186e-03

Joint ci ratio: 5.505190e-02	ci left: 1.577764e-03	ci right 1.667395e-03	k: 5061	n:3120000
Cons ci ratio: 6.277706e-04	ci left: 9.256200e-01	ci right 9.262016e-01	k: 2888843	n:3120000
KS ci ratio: 1.031697e-01	ci left: 4.386348e-04	ci right 4.866592e-04	k: 1442	n:3120000
PBXIP1   3120000 perm   4167 sec   (749 perm/sec)   p_kst 4.621795e-04   p_cons 9.259112e-01   p_joint 1.622115e-03

Joint ci ratio: 5.493802e-02	ci left: 1.579341e-03	ci right 1.668870e-03	k: 5082	n:3130000
Cons ci ratio: 6.267949e-04	ci left: 9.256144e-01	ci right 9.261950e-01	k: 2898083	n:3130000
KS ci ratio: 1.028849e-01	ci left: 4.397234e-04	ci right 4.877261e-04	k: 1450	n:3130000
PBXIP1   3130000 perm   4192 sec   (747 perm/sec)   p_kst 4.632588e-04   p_cons 9.259051e-01   p_joint 1.623642e-03

Joint ci ratio: 5.481947e-02	ci left: 1.581221e-03	ci right 1.670657e-03	k: 5104	n:3140000
Cons ci ratio: 6.257699e-04	ci left: 9.256206e-01	ci right 9.262003e-01	k: 2907360	n:3140000
KS ci ratio: 1.026376e-01	ci left: 4.404951e-04	ci right 4.884594e-04	k: 1457	n:3140000
PBXIP1   3140000 perm   4217 sec   (745 perm/sec)   p_kst 4.640127e-04   p_cons 9.259108e-01   p_joint 1.625478e-03

Joint ci ratio: 5.474447e-02	ci left: 1.580585e-03	ci right 1.669859e-03	k: 5118	n:3150000
Cons ci ratio: 6.248367e-04	ci left: 9.256076e-01	ci right 9.261865e-01	k: 2916577	n:3150000
KS ci ratio: 1.025673e-01	ci left: 4.397153e-04	ci right 4.875600e-04	k: 1459	n:3150000
PBXIP1   3150000 perm   4241 sec   (743 perm/sec)   p_kst 4.631746e-04   p_cons 9.258975e-01   p_joint 1.624762e-03

Joint ci ratio: 5.466445e-02	ci left: 1.580265e-03	ci right 1.669386e-03	k: 5133	n:3160000
Cons ci ratio: 6.238228e-04	ci left: 9.256135e-01	ci right 9.261914e-01	k: 2925853	n:3160000
KS ci ratio: 1.023223e-01	ci left: 4.404822e-04	ci right 4.882890e-04	k: 1466	n:3160000
PBXIP1   3160000 perm   4266 sec   (741 perm/sec)   p_kst 4.639241e-04   p_cons 9.259028e-01   p_joint 1.624367e-03

Joint ci ratio: 5.458478e-02	ci left: 1.579947e-03	ci right 1.668917e-03	k: 5148	n:3170000
Cons ci ratio: 6.228510e-04	ci left: 9.256111e-01	ci right 9.261881e-01	k: 2935103	n:3170000
KS ci ratio: 1.021831e-01	ci left: 4.403223e-04	ci right 4.880427e-04	k: 1470	n:3170000
PBXIP1   3170000 perm   4291 sec   (739 perm/sec)   p_kst 4.637224e-04   p_cons 9.259000e-01   p_joint 1.623975e-03

Joint ci ratio: 5.450546e-02	ci left: 1.579631e-03	ci right 1.668450e-03	k: 5163	n:3180000
Cons ci ratio: 6.219606e-04	ci left: 9.255917e-01	ci right 9.261679e-01	k: 2944299	n:3180000
KS ci ratio: 1.019753e-01	ci left: 4.407762e-04	ci right 4.884430e-04	k: 1476	n:3180000
PBXIP1   3180000 perm   4315 sec   (737 perm/sec)   p_kst 4.641509e-04   p_cons 9.258802e-01   p_joint 1.623585e-03

Joint ci ratio: 5.443174e-02	ci left: 1.579009e-03	ci right 1.667668e-03	k: 5177	n:3190000
Cons ci ratio: 6.209720e-04	ci left: 9.255951e-01	ci right 9.261703e-01	k: 2953567	n:3190000
KS ci ratio: 1.019063e-01	ci left: 4.400054e-04	ci right 4.875547e-04	k: 1478	n:3190000
PBXIP1   3190000 perm   4341 sec   (735 perm/sec)   p_kst 4.633229e-04   p_cons 9.258831e-01   p_joint 1.622884e-03

Joint ci ratio: 5.437406e-02	ci left: 1.577465e-03	ci right 1.665941e-03	k: 5188	n:3200000
Cons ci ratio: 6.200360e-04	ci left: 9.255877e-01	ci right 9.261621e-01	k: 2962801	n:3200000
KS ci ratio: 1.017688e-01	ci left: 4.398486e-04	ci right 4.873130e-04	k: 1482	n:3200000
PBXIP1   3200000 perm   4367 sec   (733 perm/sec)   p_kst 4.631250e-04   p_cons 9.258753e-01   p_joint 1.621250e-03

Joint ci ratio: 5.430088e-02	ci left: 1.576853e-03	ci right 1.665172e-03	k: 5202	n:3210000
Cons ci ratio: 6.191098e-04	ci left: 9.255792e-01	ci right 9.261527e-01	k: 2972031	n:3210000
KS ci ratio: 1.016319e-01	ci left: 4.396928e-04	ci right 4.870726e-04	k: 1486	n:3210000
PBXIP1   3210000 perm   4393 sec   (731 perm/sec)   p_kst 4.629283e-04   p_cons 9.258664e-01   p_joint 1.620561e-03

Joint ci ratio: 5.422799e-02	ci left: 1.576245e-03	ci right 1.664407e-03	k: 5216	n:3220000
Cons ci ratio: 6.181081e-04	ci left: 9.255885e-01	ci right 9.261611e-01	k: 2981318	n:3220000
KS ci ratio: 1.014274e-01	ci left: 4.401433e-04	ci right 4.874706e-04	k: 1492	n:3220000
PBXIP1   3220000 perm   4419 sec   (729 perm/sec)   p_kst 4.633540e-04   p_cons 9.258752e-01   p_joint 1.619876e-03

Joint ci ratio: 5.417095e-02	ci left: 1.574724e-03	ci right 1.662706e-03	k: 5227	n:3230000
Cons ci ratio: 6.171530e-04	ci left: 9.255884e-01	ci right 9.261601e-01	k: 2990575	n:3230000
KS ci ratio: 1.013257e-01	ci left: 4.396859e-04	ci right 4.869138e-04	k: 1495	n:3230000
PBXIP1   3230000 perm   4445 sec   (727 perm/sec)   p_kst 4.628483e-04   p_cons 9.258746e-01   p_joint 1.618266e-03

Joint ci ratio: 5.404182e-02	ci left: 1.577475e-03	ci right 1.665395e-03	k: 5252	n:3240000
Cons ci ratio: 6.161801e-04	ci left: 9.255932e-01	ci right 9.261640e-01	k: 2999848	n:3240000
KS ci ratio: 1.011231e-01	ci left: 4.401338e-04	ci right 4.873097e-04	k: 1501	n:3240000
PBXIP1   3240000 perm   4471 sec   (725 perm/sec)   p_kst 4.632716e-04   p_cons 9.258790e-01   p_joint 1.620988e-03

Joint ci ratio: 5.394433e-02	ci left: 1.578389e-03	ci right 1.666195e-03	k: 5271	n:3250000
Cons ci ratio: 6.151911e-04	ci left: 9.256027e-01	ci right 9.261726e-01	k: 3009136	n:3250000
KS ci ratio: 1.008882e-01	ci left: 4.408790e-04	ci right 4.880185e-04	k: 1508	n:3250000
PBXIP1   3250000 perm   4496 sec   (723 perm/sec)   p_kst 4.640000e-04   p_cons 9.258880e-01   p_joint 1.621846e-03

Joint ci ratio: 5.388818e-02	ci left: 1.576876e-03	ci right 1.664504e-03	k: 5282	n:3260000
Cons ci ratio: 6.141410e-04	ci left: 9.256268e-01	ci right 9.261957e-01	k: 3018472	n:3260000
KS ci ratio: 1.006882e-01	ci left: 4.413207e-04	ci right 4.884084e-04	k: 1514	n:3260000
PBXIP1   3260000 perm   4521 sec   (721 perm/sec)   p_kst 4.644172e-04   p_cons 9.259117e-01   p_joint 1.620245e-03

Joint ci ratio: 5.382712e-02	ci left: 1.575674e-03	ci right 1.663133e-03	k: 5294	n:3270000
Cons ci ratio: 6.132669e-04	ci left: 9.256125e-01	ci right 9.261806e-01	k: 3027683	n:3270000
KS ci ratio: 1.005556e-01	ci left: 4.411635e-04	ci right 4.881688e-04	k: 1518	n:3270000
PBXIP1   3270000 perm   4547 sec   (719 perm/sec)   p_kst 4.642202e-04   p_cons 9.258969e-01   p_joint 1.618960e-03

Joint ci ratio: 5.374091e-02	ci left: 1.575983e-03	ci right 1.663315e-03	k: 5311	n:3280000
Cons ci ratio: 6.123395e-04	ci left: 9.256111e-01	ci right 9.261784e-01	k: 3036936	n:3280000
KS ci ratio: 1.004235e-01	ci left: 4.410074e-04	ci right 4.879306e-04	k: 1522	n:3280000
PBXIP1   3280000 perm   4573 sec   (717 perm/sec)   p_kst 4.640244e-04   p_cons 9.258951e-01   p_joint 1.619207e-03

Joint ci ratio: 5.363496e-02	ci left: 1.577490e-03	ci right 1.664728e-03	k: 5332	n:3290000
Cons ci ratio: 6.114135e-04	ci left: 9.256103e-01	ci right 9.261767e-01	k: 3046191	n:3290000
KS ci ratio: 1.001934e-01	ci left: 4.417412e-04	ci right 4.886285e-04	k: 1529	n:3290000
PBXIP1   3290000 perm   4599 sec   (715 perm/sec)   p_kst 4.647416e-04   p_cons 9.258939e-01   p_joint 1.620669e-03

Joint ci ratio: 5.353464e-02	ci left: 1.578690e-03	ci right 1.665825e-03	k: 5352	n:3300000
Cons ci ratio: 6.105214e-04	ci left: 9.256029e-01	ci right 9.261685e-01	k: 3055424	n:3300000
KS ci ratio: 9.999754e-02	ci left: 4.421753e-04	ci right 4.890115e-04	k: 1535	n:3300000
PBXIP1   3300000 perm   4624 sec   (714 perm/sec)   p_kst 4.651515e-04   p_cons 9.258861e-01   p_joint 1.621818e-03

Outputting figure to mutsig2_images.part000000000126/PBXIP1.2_2236_3300000_0.00046515_0.92589_0.0016218.png
                gene_name: PBXIP1
               theta_stop: 0.100 
                    nperm: 3300000 
                     p_ks: 0.00047 
        ci_ks_bounds_left: 0.00044 
       ci_ks_bounds_right: 0.00049 
                   p_cons: 0.93 
      ci_cons_bounds_left: 0.93 
     ci_cons_bounds_right: 0.93 
                  p_joint: 0.0016 
     ci_joint_bounds_left: 0.0016 
    ci_joint_bounds_right: 0.0017 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000126
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 126 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1429>
Subject: Job 8704300: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1429>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000127> was used as the working directory.
Started at Thu Nov 15 19:35:30 2012
Results reported at Thu Nov 15 20:51:54 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000127.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000127.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 127  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000127.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   5007.86 sec.
    Max Memory :      6171 MB
    Max Swap   :      8546 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
127
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 127
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 127: processing genes 11400 - 11489
Calculating significance of each gene.
Using projection method.
11400	PCDH7	1
11401	PCDH8	9.817650e-02
11402	PCDH9	1.568928e-01
In gene PCDHA1 the following bins exceed PROBCAP:
    THCA-ET-A2N4-TP	categ 5	N = 2890    n = 1	mu =   2.14e-07
11403	PCDHA1	3.020977e-01
11404	PCDHA10	1
11405	PCDHA11	1
11406	PCDHA12	1
11407	PCDHA13	1
11408	PCDHA2	1
11409	PCDHA3	2.431380e-01
11410	PCDHA4	1
11411	PCDHA5	1
11412	PCDHA6	1
11413	PCDHA7	1
11414	PCDHA8	7.040623e-02
11415	PCDHA9	1.677729e-01
11416	PCDHAC1	1
11417	PCDHAC2	1
11418	PCDHB1	3.296650e-01
11419	PCDHB10	3.474159e-01
11420	PCDHB11	1
11421	PCDHB12	1
11422	PCDHB13	1
11423	PCDHB14	1
11424	PCDHB15	1
11425	PCDHB16	4.992503e-02
11426	PCDHB2	1
11427	PCDHB3	4.222396e-02
11428	PCDHB4	2.504983e-01
11429	PCDHB5	1
11430	PCDHB6	6.489729e-02
11431	PCDHB7	1
11432	PCDHB8	3.110086e-01
11433	PCDHB9	9.745402e-03
11434	PCDHGA1	1
11435	PCDHGA10	1
In gene PCDHGA11 the following bins exceed PROBCAP:
    THCA-EL-A3GR-TP	categ 6	N = 2897    n = 1	mu =   9.98e-08
11436	PCDHGA11	1.705266e-01
11437	PCDHGA12	4.052667e-01
11438	PCDHGA2	1
11439	PCDHGA3	1
11440	PCDHGA4	4.138505e-02
11441	PCDHGA5	3.736992e-01
11442	PCDHGA6	1
11443	PCDHGA7	1
11444	PCDHGA8	1
11445	PCDHGA9	1
11446	PCDHGB1	1
11447	PCDHGB2	1
11448	PCDHGB3	1.055256e-01
11449	PCDHGB4	1.335258e-01
11450	PCDHGB5	1
11451	PCDHGB6	1
11452	PCDHGB7	1
11453	PCDHGC3	1
11454	PCDHGC4	2.308821e-01
11455	PCDHGC5	1
11456	PCDP1	1
11457	PCF11	1
11458	PCGF1	1
11459	PCGF2	7.393510e-03
11460	PCGF3	1
11461	PCGF5	1
11462	PCGF6	1
11463	PCID2	7.102219e-02
11464	PCIF1	1
11465	PCK1	1
11466	PCK2	1.195166e-01
11467	PCLO	6.906036e-01
11468	PCM1	3.164481e-01
11469	PCMT1	1
11470	PCMTD1	1
11471	PCMTD2	1
11472	PCNA	1
11473	PCNP	1
11474	PCNT	1
11475	PCNX	1
11476	PCNXL2	5.125628e-01
11477	PCNXL3	1
11478	PCOLCE	1
11479	PCOLCE2	1
11480	PCOTH	1
11481	PCP2	1
11482	PCP4	1
In gene PCP4L1 the following bins exceed PROBCAP:
    THCA-EL-A3T9-TP	categ 6	N = 206     n = 1	mu =   1.01e-07
11483	PCP4L1	1.007307e-02
11484	PCSK1	3.186610e-02
11485	PCSK2	1
In gene PCSK4 the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 6	N = 1609    n = 1	mu =   6.66e-08
11486	PCSK4	1.363302e-02
11487	PCSK5	1.014797e-01
11488	PCSK6	2.493536e-01
11489	PCSK7	1
Done

Running MutSig 2:
Scatter job 127: processing genes 11400 - 11489
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PCDHB9
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.853352e-02	ci left: 4.986503e-01	ci right 5.183447e-01	k: 5085	n:10000
Cons ci ratio: 3.484857e-02	ci left: 5.487016e-01	ci right 5.682643e-01	k: 5585	n:10000
KS ci ratio: 4.786111e-02	ci left: 3.917725e-01	ci right 4.110850e-01	k: 4014	n:10000
PCDHB9   10000 perm   2 sec   (5329 perm/sec)   p_kst 4.014000e-01   p_cons 5.585000e-01   p_joint 5.085000e-01

Outputting figure to mutsig2_images.part000000000127/PCDHB9.3_2397_10000_0.4014_0.5585_0.5085.png
                gene_name: PCDHB9
               theta_stop: 0.048 
                    nperm: 10000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.56 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.57 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 10 percent done.
PCDHA3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.432937e-02	ci left: 7.130044e-01	ci right 7.306662e-01	k: 7219	n:10000
Cons ci ratio: 2.008330e-02	ci left: 7.840118e-01	ci right 8.000177e-01	k: 7921	n:10000
KS ci ratio: 7.869324e-02	ci left: 1.909179e-01	ci right 2.066579e-01	k: 1987	n:10000
PCDHA3   10000 perm   2 sec   (5405 perm/sec)   p_kst 1.987000e-01   p_cons 7.921000e-01   p_joint 7.219000e-01

Outputting figure to mutsig2_images.part000000000127/PCDHA3.2_2948_10000_0.1987_0.7921_0.7219.png
                gene_name: PCDHA3
               theta_stop: 0.079 
                    nperm: 10000 
                     p_ks: 0.20 
        ci_ks_bounds_left: 0.19 
       ci_ks_bounds_right: 0.21 
                   p_cons: 0.79 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.80 
                  p_joint: 0.72 
     ci_joint_bounds_left: 0.71 
    ci_joint_bounds_right: 0.73 

Current progress: 20 percent done.
PCDHA8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.307401e-02	ci left: 5.743665e-01	ci right 5.937845e-01	k: 5841	n:10000
Cons ci ratio: 3.486271e-02	ci left: 5.485012e-01	ci right 5.680648e-01	k: 5583	n:10000
KS ci ratio: 4.854499e-02	ci left: 3.850022e-01	ci right 4.042592e-01	k: 3946	n:10000
PCDHA8   10000 perm   2 sec   (5156 perm/sec)   p_kst 3.946000e-01   p_cons 5.583000e-01   p_joint 5.841000e-01

Outputting figure to mutsig2_images.part000000000127/PCDHA8.2_2920_10000_0.3946_0.5583_0.5841.png
                gene_name: PCDHA8
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.39 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.40 
                   p_cons: 0.56 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.57 
                  p_joint: 0.58 
     ci_joint_bounds_left: 0.57 
    ci_joint_bounds_right: 0.59 

Current progress: 30 percent done.
PCDHB16
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.977666e-01	ci left: 3.405205e-02	ci right 4.162024e-02	k: 377	n:10000
Cons ci ratio: 2.138797e-02	ci left: 7.622312e-01	ci right 7.788109e-01	k: 7706	n:10000
KS ci ratio: 5.177092e-01	ci left: 4.232871e-03	ci right 7.265981e-03	k: 56	n:10000
PCDHB16   10000 perm   2 sec   (6013 perm/sec)   p_kst 5.600000e-03   p_cons 7.706000e-01   p_joint 3.770000e-02

Joint ci ratio: 2.463622e-01	ci left: 1.095946e-02	ci right 1.408466e-02	k: 249	n:20000
Cons ci ratio: 1.523900e-02	ci left: 7.619854e-01	ci right 7.737366e-01	k: 15358	n:20000
KS ci ratio: 3.289497e-01	ci left: 5.891661e-03	ci right 8.255063e-03	k: 140	n:20000
PCDHB16   20000 perm   4 sec   (5128 perm/sec)   p_kst 7.000000e-03   p_cons 7.679000e-01   p_joint 1.245000e-02

Joint ci ratio: 1.663795e-01	ci left: 1.665355e-02	ci right 1.970744e-02	k: 544	n:30000
Cons ci ratio: 1.243677e-02	ci left: 7.632481e-01	ci right 7.728332e-01	k: 23042	n:30000
KS ci ratio: 2.735157e-01	ci left: 5.870334e-03	ci right 7.760411e-03	k: 203	n:30000
PCDHB16   30000 perm   6 sec   (4811 perm/sec)   p_kst 6.766667e-03   p_cons 7.680667e-01   p_joint 1.813333e-02

Joint ci ratio: 1.449724e-01	ci left: 1.664736e-02	ci right 1.927329e-02	k: 717	n:40000
Cons ci ratio: 1.077711e-02	ci left: 7.636806e-01	ci right 7.719805e-01	k: 30714	n:40000
KS ci ratio: 2.390951e-01	ci left: 5.876993e-03	ci right 7.495874e-03	k: 266	n:40000
PCDHB16   40000 perm   9 sec   (4697 perm/sec)   p_kst 6.650000e-03   p_cons 7.678500e-01   p_joint 1.792500e-02

Joint ci ratio: 1.300740e-01	ci left: 1.667845e-02	ci right 1.901801e-02	k: 891	n:50000
Cons ci ratio: 9.647719e-03	ci left: 7.638121e-01	ci right 7.712368e-01	k: 38377	n:50000
KS ci ratio: 2.118657e-01	ci left: 6.079469e-03	ci right 7.538676e-03	k: 339	n:50000
PCDHB16   50000 perm   11 sec   (4597 perm/sec)   p_kst 6.780000e-03   p_cons 7.675400e-01   p_joint 1.782000e-02

Joint ci ratio: 1.008400e-01	ci left: 2.332648e-02	ci right 2.581980e-02	k: 1473	n:60000
Cons ci ratio: 8.808521e-03	ci left: 7.640820e-01	ci right 7.708588e-01	k: 46049	n:60000
KS ci ratio: 1.910629e-01	ci left: 6.300866e-03	ci right 7.647487e-03	k: 417	n:60000
PCDHB16   60000 perm   13 sec   (4500 perm/sec)   p_kst 6.950000e-03   p_cons 7.674833e-01   p_joint 2.455000e-02

Joint ci ratio: 1.114323e-01	ci left: 1.640258e-02	ci right 1.835201e-02	k: 1215	n:70000
Cons ci ratio: 8.171044e-03	ci left: 7.636349e-01	ci right 7.699144e-01	k: 53675	n:70000
KS ci ratio: 1.777485e-01	ci left: 6.286488e-03	ci right 7.526345e-03	k: 482	n:70000
PCDHB16   70000 perm   16 sec   (4410 perm/sec)   p_kst 6.885714e-03   p_cons 7.667857e-01   p_joint 1.735714e-02

Joint ci ratio: 1.035443e-01	ci left: 1.668791e-02	ci right 1.852231e-02	k: 1407	n:80000
Cons ci ratio: 7.636596e-03	ci left: 7.641551e-01	ci right 7.700255e-01	k: 61368	n:80000
KS ci ratio: 1.662686e-01	ci left: 6.326087e-03	ci right 7.485106e-03	k: 551	n:80000
PCDHB16   80000 perm   18 sec   (4329 perm/sec)   p_kst 6.887500e-03   p_cons 7.671000e-01   p_joint 1.758750e-02

Joint ci ratio: 9.759124e-02	ci left: 1.675095e-02	ci right 1.848034e-02	k: 1584	n:90000
Cons ci ratio: 7.205896e-03	ci left: 7.640232e-01	ci right 7.695596e-01	k: 69012	n:90000
KS ci ratio: 1.568869e-01	ci left: 6.348216e-03	ci right 7.439486e-03	k: 619	n:90000
PCDHB16   90000 perm   21 sec   (4250 perm/sec)   p_kst 6.877778e-03   p_cons 7.668000e-01   p_joint 1.760000e-02

Joint ci ratio: 9.247934e-02	ci left: 1.683312e-02	ci right 1.847503e-02	k: 1764	n:100000
Cons ci ratio: 6.845670e-03	ci left: 7.636644e-01	ci right 7.689201e-01	k: 76630	n:100000
KS ci ratio: 1.483909e-01	ci left: 6.415544e-03	ci right 7.453365e-03	k: 692	n:100000
PCDHB16   100000 perm   24 sec   (4173 perm/sec)   p_kst 6.920000e-03   p_cons 7.663000e-01   p_joint 1.764000e-02

Joint ci ratio: 8.816408e-02	ci left: 1.687561e-02	ci right 1.844088e-02	k: 1941	n:110000
Cons ci ratio: 6.532391e-03	ci left: 7.634957e-01	ci right 7.685085e-01	k: 84261	n:110000
KS ci ratio: 1.415133e-01	ci left: 6.436848e-03	ci right 7.425781e-03	k: 761	n:110000
PCDHB16   110000 perm   27 sec   (4068 perm/sec)   p_kst 6.918182e-03   p_cons 7.660091e-01   p_joint 1.764545e-02

Joint ci ratio: 8.409899e-02	ci left: 1.703491e-02	ci right 1.853853e-02	k: 2133	n:120000
Cons ci ratio: 6.251685e-03	ci left: 7.637529e-01	ci right 7.685509e-01	k: 91939	n:120000
KS ci ratio: 1.340567e-01	ci left: 6.600502e-03	ci right 7.556886e-03	k: 848	n:120000
PCDHB16   120000 perm   30 sec   (3999 perm/sec)   p_kst 7.066667e-03   p_cons 7.661583e-01   p_joint 1.777500e-02

Joint ci ratio: 8.028563e-02	ci left: 1.728420e-02	ci right 1.873741e-02	k: 2340	n:130000
Cons ci ratio: 6.008176e-03	ci left: 7.637428e-01	ci right 7.683530e-01	k: 99587	n:130000
KS ci ratio: 1.273245e-01	ci left: 6.777375e-03	ci right 7.706348e-03	k: 940	n:130000
PCDHB16   130000 perm   33 sec   (3933 perm/sec)   p_kst 7.230769e-03   p_cons 7.660538e-01   p_joint 1.800000e-02

Joint ci ratio: 8.731354e-02	ci left: 1.357277e-02	ci right 1.481890e-02	k: 1986	n:140000
Cons ci ratio: 5.791877e-03	ci left: 7.636872e-01	ci right 7.681303e-01	k: 107228	n:140000
KS ci ratio: 1.222312e-01	ci left: 6.846887e-03	ci right 7.745129e-03	k: 1020	n:140000
PCDHB16   140000 perm   36 sec   (3864 perm/sec)   p_kst 7.285714e-03   p_cons 7.659143e-01   p_joint 1.418571e-02

Joint ci ratio: 7.443594e-02	ci left: 1.747716e-02	ci right 1.883489e-02	k: 2722	n:150000
Cons ci ratio: 5.589882e-03	ci left: 7.641232e-01	ci right 7.684132e-01	k: 114941	n:150000
KS ci ratio: 1.174357e-01	ci left: 6.940132e-03	ci right 7.812406e-03	k: 1105	n:150000
PCDHB16   150000 perm   40 sec   (3795 perm/sec)   p_kst 7.366667e-03   p_cons 7.662733e-01   p_joint 1.814667e-02

Joint ci ratio: 7.186510e-02	ci left: 1.759974e-02	ci right 1.891780e-02	k: 2920	n:160000
Cons ci ratio: 5.409900e-03	ci left: 7.643564e-01	ci right 7.685089e-01	k: 122630	n:160000
KS ci ratio: 1.135967e-01	ci left: 6.967655e-03	ci right 7.812842e-03	k: 1181	n:160000
PCDHB16   160000 perm   43 sec   (3730 perm/sec)   p_kst 7.381250e-03   p_cons 7.664375e-01   p_joint 1.825000e-02

Joint ci ratio: 6.985206e-02	ci left: 1.755251e-02	ci right 1.882871e-02	k: 3091	n:170000
Cons ci ratio: 5.249010e-03	ci left: 7.643753e-01	ci right 7.684039e-01	k: 130287	n:170000
KS ci ratio: 1.106441e-01	ci left: 6.923698e-03	ci right 7.740298e-03	k: 1245	n:170000
PCDHB16   170000 perm   46 sec   (3670 perm/sec)   p_kst 7.323529e-03   p_cons 7.663941e-01   p_joint 1.818235e-02

Joint ci ratio: 7.284450e-02	ci left: 1.525623e-02	ci right 1.641499e-02	k: 2849	n:180000
Cons ci ratio: 5.097396e-03	ci left: 7.646946e-01	ci right 7.686080e-01	k: 137998	n:180000
KS ci ratio: 1.070899e-01	ci left: 6.993022e-03	ci right 7.789634e-03	k: 1329	n:180000
PCDHB16   180000 perm   50 sec   (3613 perm/sec)   p_kst 7.383333e-03   p_cons 7.666556e-01   p_joint 1.582778e-02

Joint ci ratio: 7.089366e-02	ci left: 1.527508e-02	ci right 1.640292e-02	k: 3008	n:190000
Cons ci ratio: 4.960533e-03	ci left: 7.648127e-01	ci right 7.686212e-01	k: 145677	n:190000
KS ci ratio: 1.044546e-01	ci left: 6.973391e-03	ci right 7.747017e-03	k: 1397	n:190000
PCDHB16   190000 perm   53 sec   (3556 perm/sec)   p_kst 7.352632e-03   p_cons 7.667211e-01   p_joint 1.583158e-02

Joint ci ratio: 6.889300e-02	ci left: 1.538088e-02	ci right 1.648321e-02	k: 3185	n:200000
Cons ci ratio: 4.830280e-03	ci left: 7.652061e-01	ci right 7.689162e-01	k: 153413	n:200000
KS ci ratio: 1.015522e-01	ci left: 7.019296e-03	ci right 7.775087e-03	k: 1478	n:200000
PCDHB16   200000 perm   57 sec   (3503 perm/sec)   p_kst 7.390000e-03   p_cons 7.670650e-01   p_joint 1.592500e-02

Joint ci ratio: 6.248720e-02	ci left: 1.782010e-02	ci right 1.897420e-02	k: 3862	n:210000
Cons ci ratio: 4.714414e-03	ci left: 7.652097e-01	ci right 7.688305e-01	k: 161075	n:210000
KS ci ratio: 9.897483e-02	ci left: 7.047164e-03	ci right 7.785578e-03	k: 1556	n:210000
PCDHB16   210000 perm   61 sec   (3455 perm/sec)   p_kst 7.409524e-03   p_cons 7.670238e-01   p_joint 1.839048e-02

Outputting figure to mutsig2_images.part000000000127/PCDHB16.2_2335_210000_0.0074095_0.76702_0.01839.png
                gene_name: PCDHB16
               theta_stop: 0.099 
                    nperm: 210000 
                     p_ks: 0.0074 
        ci_ks_bounds_left: 0.0070 
       ci_ks_bounds_right: 0.0078 
                   p_cons: 0.77 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.77 
                  p_joint: 0.018 
     ci_joint_bounds_left: 0.018 
    ci_joint_bounds_right: 0.019 

Current progress: 40 percent done.
PCDHB3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.638133e-01	ci left: 1.874721e-02	ci right 2.453613e-02	k: 215	n:10000
Cons ci ratio: 6.939316e-03	ci left: 9.661506e-01	ci right 9.729722e-01	k: 9697	n:10000
KS ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
PCDHB3   10000 perm   2 sec   (5793 perm/sec)   p_kst 5.000000e-04   p_cons 9.697000e-01   p_joint 2.150000e-02

Joint ci ratio: 2.892375e-01	ci left: 7.784307e-03	ci right 1.046133e-02	k: 181	n:20000
Cons ci ratio: 4.703943e-03	ci left: 9.696709e-01	ci right 9.742906e-01	k: 19441	n:20000
KS ci ratio: 1.306340e+00	ci left: 1.727069e-04	ci right 7.880065e-04	k: 8	n:20000
PCDHB3   20000 perm   4 sec   (5044 perm/sec)   p_kst 4.000000e-04   p_cons 9.720500e-01   p_joint 9.050000e-03

Joint ci ratio: 3.586265e-01	ci left: 3.256774e-03	ci right 4.708553e-03	k: 118	n:30000
Cons ci ratio: 4.132263e-03	ci left: 9.657056e-01	ci right 9.697365e-01	k: 29033	n:30000
KS ci ratio: 1.086959e+00	ci left: 2.067024e-04	ci right 6.986151e-04	k: 12	n:30000
PCDHB3   30000 perm   6 sec   (4814 perm/sec)   p_kst 4.000000e-04   p_cons 9.677667e-01   p_joint 3.933333e-03

Joint ci ratio: 2.635553e-01	ci left: 4.775457e-03	ci right 6.247731e-03	k: 219	n:40000
Cons ci ratio: 3.323343e-03	ci left: 9.704132e-01	ci right 9.736678e-01	k: 38883	n:40000
KS ci ratio: 8.171313e-01	ci left: 3.447132e-04	ci right 8.325889e-04	k: 22	n:40000
PCDHB3   40000 perm   9 sec   (4654 perm/sec)   p_kst 5.500000e-04   p_cons 9.720750e-01   p_joint 5.475000e-03

Joint ci ratio: 2.643057e-01	ci left: 3.801426e-03	ci right 4.977259e-03	k: 218	n:50000
Cons ci ratio: 2.979630e-03	ci left: 9.704548e-01	ci right 9.733701e-01	k: 48597	n:50000
KS ci ratio: 7.999666e-01	ci left: 2.916222e-04	ci right 6.901464e-04	k: 23	n:50000
PCDHB3   50000 perm   11 sec   (4523 perm/sec)   p_kst 4.600000e-04   p_cons 9.719400e-01   p_joint 4.360000e-03

Joint ci ratio: 2.877571e-01	ci left: 2.640096e-03	ci right 3.542364e-03	k: 184	n:60000
Cons ci ratio: 2.720207e-03	ci left: 9.705804e-01	ci right 9.732404e-01	k: 58316	n:60000
KS ci ratio: 6.720784e-01	ci left: 3.786240e-04	ci right 7.723186e-04	k: 33	n:60000
PCDHB3   60000 perm   14 sec   (4410 perm/sec)   p_kst 5.500000e-04   p_cons 9.719333e-01   p_joint 3.066667e-03

Joint ci ratio: 3.029745e-01	ci left: 2.024733e-03	ci right 2.760345e-03	k: 166	n:70000
Cons ci ratio: 2.525130e-03	ci left: 9.705322e-01	ci right 9.729999e-01	k: 68025	n:70000
KS ci ratio: 6.275230e-01	ci left: 3.841858e-04	ci right 7.450385e-04	k: 38	n:70000
PCDHB3   70000 perm   16 sec   (4320 perm/sec)   p_kst 5.428571e-04   p_cons 9.717857e-01   p_joint 2.371429e-03

Joint ci ratio: 2.886519e-01	ci left: 1.968372e-03	ci right 2.643533e-03	k: 183	n:80000
Cons ci ratio: 2.355973e-03	ci left: 9.707568e-01	ci right 9.730588e-01	k: 77754	n:80000
KS ci ratio: 5.976300e-01	ci left: 3.783992e-04	ci right 7.095820e-04	k: 42	n:80000
PCDHB3   80000 perm   19 sec   (4235 perm/sec)   p_kst 5.250000e-04   p_cons 9.719250e-01   p_joint 2.287500e-03

Joint ci ratio: 2.782741e-01	ci left: 1.894154e-03	ci right 2.516406e-03	k: 197	n:90000
Cons ci ratio: 2.212693e-03	ci left: 9.710371e-01	ci right 9.731990e-01	k: 87492	n:90000
KS ci ratio: 5.716383e-01	ci left: 3.742211e-04	ci right 6.816924e-04	k: 46	n:90000
PCDHB3   90000 perm   22 sec   (4157 perm/sec)   p_kst 5.111111e-04   p_cons 9.721333e-01   p_joint 2.188889e-03

Joint ci ratio: 2.769072e-01	ci left: 1.723324e-03	ci right 2.286188e-03	k: 199	n:100000
Cons ci ratio: 2.113523e-03	ci left: 9.707145e-01	ci right 9.727780e-01	k: 97176	n:100000
KS ci ratio: 5.542303e-01	ci left: 3.625260e-04	ci right 6.477549e-04	k: 49	n:100000
PCDHB3   100000 perm   25 sec   (4078 perm/sec)   p_kst 4.900000e-04   p_cons 9.717600e-01   p_joint 1.990000e-03

Joint ci ratio: 2.409685e-01	ci left: 2.110943e-03	ci right 2.697603e-03	k: 263	n:110000
Cons ci ratio: 2.008654e-03	ci left: 9.709433e-01	ci right 9.729044e-01	k: 106913	n:110000
KS ci ratio: 5.284381e-01	ci left: 3.688069e-04	ci right 6.404820e-04	k: 54	n:110000
PCDHB3   110000 perm   27 sec   (4004 perm/sec)   p_kst 4.909091e-04   p_cons 9.719364e-01   p_joint 2.390909e-03

Joint ci ratio: 2.471683e-01	ci left: 1.833289e-03	ci right 2.357907e-03	k: 250	n:120000
Cons ci ratio: 1.926158e-03	ci left: 9.708985e-01	ci right 9.727786e-01	k: 116622	n:120000
KS ci ratio: 5.237076e-01	ci left: 3.452975e-04	ci right 5.965426e-04	k: 55	n:120000
PCDHB3   120000 perm   31 sec   (3934 perm/sec)   p_kst 4.583333e-04   p_cons 9.718500e-01   p_joint 2.083333e-03

Joint ci ratio: 2.348536e-01	ci left: 1.887430e-03	ci right 2.396725e-03	k: 277	n:130000
Cons ci ratio: 1.850444e-03	ci left: 9.709404e-01	ci right 9.727462e-01	k: 126341	n:130000
KS ci ratio: 4.898775e-01	ci left: 3.724112e-04	ci right 6.199916e-04	k: 63	n:130000
PCDHB3   130000 perm   34 sec   (3865 perm/sec)   p_kst 4.846154e-04   p_cons 9.718538e-01   p_joint 2.130769e-03

Joint ci ratio: 1.863718e-01	ci left: 2.856419e-03	ci right 3.450169e-03	k: 440	n:140000
Cons ci ratio: 1.786963e-03	ci left: 9.708542e-01	ci right 9.725976e-01	k: 136043	n:140000
KS ci ratio: 4.717946e-01	ci left: 3.771953e-04	ci right 6.157186e-04	k: 68	n:140000
PCDHB3   140000 perm   37 sec   (3802 perm/sec)   p_kst 4.857143e-04   p_cons 9.717357e-01   p_joint 3.142857e-03

Joint ci ratio: 1.793870e-01	ci left: 2.888649e-03	ci right 3.464153e-03	k: 475	n:150000
Cons ci ratio: 1.725804e-03	ci left: 9.709024e-01	ci right 9.725860e-01	k: 145763	n:150000
KS ci ratio: 4.618640e-01	ci left: 3.696952e-04	ci right 5.970087e-04	k: 71	n:150000
PCDHB3   150000 perm   40 sec   (3740 perm/sec)   p_kst 4.733333e-04   p_cons 9.717533e-01   p_joint 3.166667e-03

Joint ci ratio: 1.753853e-01	ci left: 2.839497e-03	ci right 3.391251e-03	k: 497	n:160000
Cons ci ratio: 1.678117e-03	ci left: 9.706920e-01	ci right 9.723284e-01	k: 155443	n:160000
KS ci ratio: 4.618710e-01	ci left: 3.465882e-04	ci right 5.596978e-04	k: 71	n:160000
PCDHB3   160000 perm   43 sec   (3680 perm/sec)   p_kst 4.437500e-04   p_cons 9.715187e-01   p_joint 3.106250e-03

Joint ci ratio: 1.887994e-01	ci left: 2.290613e-03	ci right 2.773661e-03	k: 429	n:170000
Cons ci ratio: 1.626997e-03	ci left: 9.707516e-01	ci right 9.723381e-01	k: 165164	n:170000
KS ci ratio: 4.466230e-01	ci left: 3.522472e-04	ci right 5.595293e-04	k: 76	n:170000
PCDHB3   170000 perm   47 sec   (3623 perm/sec)   p_kst 4.470588e-04   p_cons 9.715529e-01   p_joint 2.523529e-03

Joint ci ratio: 1.792460e-01	ci left: 2.412460e-03	ci right 2.892670e-03	k: 476	n:180000
Cons ci ratio: 1.585835e-03	ci left: 9.706083e-01	ci right 9.721542e-01	k: 174850	n:180000
KS ci ratio: 4.226023e-01	ci left: 3.772112e-04	ci right 5.838775e-04	k: 85	n:180000
PCDHB3   180000 perm   50 sec   (3567 perm/sec)   p_kst 4.722222e-04   p_cons 9.713889e-01   p_joint 2.644444e-03

Joint ci ratio: 1.940985e-01	ci left: 1.934209e-03	ci right 2.354897e-03	k: 406	n:190000
Cons ci ratio: 1.542638e-03	ci left: 9.706620e-01	ci right 9.721657e-01	k: 184570	n:190000
KS ci ratio: 4.131053e-01	ci left: 3.761969e-04	ci right 5.764013e-04	k: 89	n:190000
PCDHB3   190000 perm   54 sec   (3511 perm/sec)   p_kst 4.684211e-04   p_cons 9.714211e-01   p_joint 2.136842e-03

Joint ci ratio: 1.903948e-01	ci left: 1.913646e-03	ci right 2.321000e-03	k: 422	n:200000
Cons ci ratio: 1.501297e-03	ci left: 9.707664e-01	ci right 9.722298e-01	k: 194301	n:200000
KS ci ratio: 4.063895e-01	ci left: 3.708405e-04	ci right 5.641198e-04	k: 92	n:200000
PCDHB3   200000 perm   58 sec   (3458 perm/sec)   p_kst 4.600000e-04   p_cons 9.715050e-01   p_joint 2.110000e-03

Joint ci ratio: 1.910846e-01	ci left: 1.808907e-03	ci right 2.195522e-03	k: 419	n:210000
Cons ci ratio: 1.468263e-03	ci left: 9.706637e-01	ci right 9.720946e-01	k: 203991	n:210000
KS ci ratio: 3.979228e-01	ci left: 3.703024e-04	ci right 5.582214e-04	k: 96	n:210000
PCDHB3   210000 perm   62 sec   (3409 perm/sec)   p_kst 4.571429e-04   p_cons 9.713857e-01   p_joint 1.995238e-03

Joint ci ratio: 1.497613e-01	ci left: 2.871999e-03	ci right 3.341245e-03	k: 682	n:220000
Cons ci ratio: 1.433663e-03	ci left: 9.707134e-01	ci right 9.721105e-01	k: 213712	n:220000
KS ci ratio: 3.880470e-01	ci left: 3.739522e-04	ci right 5.578095e-04	k: 101	n:220000
PCDHB3   220000 perm   65 sec   (3362 perm/sec)   p_kst 4.590909e-04   p_cons 9.714182e-01   p_joint 3.100000e-03

Joint ci ratio: 1.462688e-01	ci left: 2.885295e-03	ci right 3.344759e-03	k: 715	n:230000
Cons ci ratio: 1.517028e-03	ci left: 9.659631e-01	ci right 9.674338e-01	k: 222342	n:230000
KS ci ratio: 3.771128e-01	ci left: 3.812721e-04	ci right 5.621403e-04	k: 107	n:230000
PCDHB3   230000 perm   69 sec   (3316 perm/sec)   p_kst 4.652174e-04   p_cons 9.667043e-01   p_joint 3.108696e-03

Joint ci ratio: 1.627127e-01	ci left: 2.216181e-03	ci right 2.612655e-03	k: 578	n:240000
Cons ci ratio: 1.485664e-03	ci left: 9.659534e-01	ci right 9.673936e-01	k: 232003	n:240000
KS ci ratio: 3.719831e-01	ci left: 3.767089e-04	ci right 5.523896e-04	k: 110	n:240000
PCDHB3   240000 perm   73 sec   (3267 perm/sec)   p_kst 4.583333e-04   p_cons 9.666792e-01   p_joint 2.408333e-03

Joint ci ratio: 1.506767e-01	ci left: 2.496525e-03	ci right 2.907140e-03	k: 674	n:250000
Cons ci ratio: 1.452460e-03	ci left: 9.661105e-01	ci right 9.675187e-01	k: 241705	n:250000
KS ci ratio: 3.607794e-01	ci left: 3.870636e-04	ci right 5.608597e-04	k: 117	n:250000
PCDHB3   250000 perm   78 sec   (3222 perm/sec)   p_kst 4.680000e-04   p_cons 9.668200e-01   p_joint 2.696000e-03

Joint ci ratio: 1.517020e-01	ci left: 2.367187e-03	ci right 2.759418e-03	k: 665	n:260000
Cons ci ratio: 1.421192e-03	ci left: 9.662635e-01	ci right 9.676415e-01	k: 251409	n:260000
KS ci ratio: 3.562800e-01	ci left: 3.826756e-04	ci right 5.518619e-04	k: 120	n:260000
PCDHB3   260000 perm   82 sec   (3181 perm/sec)   p_kst 4.615385e-04   p_cons 9.669577e-01   p_joint 2.557692e-03

Joint ci ratio: 1.569962e-01	ci left: 2.122821e-03	ci right 2.487994e-03	k: 621	n:270000
Cons ci ratio: 1.396043e-03	ci left: 9.662108e-01	ci right 9.675643e-01	k: 261061	n:270000
KS ci ratio: 3.491392e-01	ci left: 3.853805e-04	ci right 5.515750e-04	k: 125	n:270000
PCDHB3   270000 perm   86 sec   (3141 perm/sec)   p_kst 4.629630e-04   p_cons 9.668926e-01   p_joint 2.300000e-03

Joint ci ratio: 1.720752e-01	ci left: 1.690806e-03	ci right 2.012502e-03	k: 517	n:280000
Cons ci ratio: 1.370496e-03	ci left: 9.662415e-01	ci right 9.675702e-01	k: 270735	n:280000
KS ci ratio: 3.437263e-01	ci left: 3.846598e-04	ci right 5.473998e-04	k: 129	n:280000
PCDHB3   280000 perm   90 sec   (3101 perm/sec)   p_kst 4.607143e-04   p_cons 9.669107e-01   p_joint 1.846429e-03

Joint ci ratio: 1.683764e-01	ci left: 1.708435e-03	ci right 2.025790e-03	k: 540	n:290000
Cons ci ratio: 1.345359e-03	ci left: 9.663156e-01	ci right 9.676199e-01	k: 280422	n:290000
KS ci ratio: 3.360578e-01	ci left: 3.903199e-04	ci right 5.509724e-04	k: 135	n:290000
PCDHB3   290000 perm   95 sec   (3058 perm/sec)   p_kst 4.655172e-04   p_cons 9.669724e-01   p_joint 1.862069e-03

Joint ci ratio: 1.653474e-01	ci left: 1.715371e-03	ci right 2.027711e-03	k: 560	n:300000
Cons ci ratio: 1.322587e-03	ci left: 9.663344e-01	ci right 9.676166e-01	k: 290094	n:300000
KS ci ratio: 3.265877e-01	ci left: 4.017586e-04	ci right 5.614826e-04	k: 143	n:300000
PCDHB3   300000 perm   99 sec   (3017 perm/sec)   p_kst 4.766667e-04   p_cons 9.669800e-01   p_joint 1.866667e-03

Joint ci ratio: 1.830339e-01	ci left: 1.342202e-03	ci right 1.615641e-03	k: 457	n:310000
Cons ci ratio: 1.302576e-03	ci left: 9.662708e-01	ci right 9.675334e-01	k: 299741	n:310000
KS ci ratio: 3.243446e-01	ci left: 3.947230e-04	ci right 5.503476e-04	k: 145	n:310000
PCDHB3   310000 perm   104 sec   (2979 perm/sec)   p_kst 4.677419e-04   p_cons 9.669065e-01   p_joint 1.474194e-03

Joint ci ratio: 1.799179e-01	ci left: 1.347987e-03	ci right 1.617420e-03	k: 473	n:320000
Cons ci ratio: 1.281125e-03	ci left: 9.663280e-01	ci right 9.675698e-01	k: 309425	n:320000
KS ci ratio: 3.158061e-01	ci left: 4.053803e-04	ci right 5.601501e-04	k: 153	n:320000
PCDHB3   320000 perm   109 sec   (2939 perm/sec)   p_kst 4.781250e-04   p_cons 9.669531e-01   p_joint 1.478125e-03

Joint ci ratio: 1.760584e-01	ci left: 1.367942e-03	ci right 1.634874e-03	k: 494	n:330000
Cons ci ratio: 1.168956e-03	ci left: 9.709205e-01	ci right 9.720591e-01	k: 320593	n:330000
KS ci ratio: 3.088634e-01	ci left: 4.126461e-04	ci right 5.660447e-04	k: 160	n:330000
PCDHB3   330000 perm   114 sec   (2900 perm/sec)   p_kst 4.848485e-04   p_cons 9.714939e-01   p_joint 1.496970e-03

Joint ci ratio: 1.724371e-01	ci left: 1.386781e-03	ci right 1.651244e-03	k: 515	n:340000
Cons ci ratio: 1.152610e-03	ci left: 9.708817e-01	ci right 9.720043e-01	k: 330292	n:340000
KS ci ratio: 3.005747e-01	ci left: 4.249571e-04	ci right 5.778836e-04	k: 169	n:340000
PCDHB3   340000 perm   119 sec   (2865 perm/sec)   p_kst 4.970588e-04   p_cons 9.714471e-01   p_joint 1.514706e-03

Joint ci ratio: 1.684034e-01	ci left: 1.415542e-03	ci right 1.678535e-03	k: 540	n:350000
Cons ci ratio: 1.137571e-03	ci left: 9.708136e-01	ci right 9.719214e-01	k: 339980	n:350000
KS ci ratio: 2.954064e-01	ci left: 4.286771e-04	ci right 5.797931e-04	k: 175	n:350000
PCDHB3   350000 perm   124 sec   (2828 perm/sec)   p_kst 5.000000e-04   p_cons 9.713714e-01   p_joint 1.542857e-03

Joint ci ratio: 1.665670e-01	ci left: 1.408157e-03	ci right 1.666639e-03	k: 552	n:360000
Cons ci ratio: 1.123713e-03	ci left: 9.707186e-01	ci right 9.718127e-01	k: 349657	n:360000
KS ci ratio: 2.929213e-01	ci left: 4.244878e-04	ci right 5.726344e-04	k: 178	n:360000
PCDHB3   360000 perm   129 sec   (2793 perm/sec)   p_kst 4.944444e-04   p_cons 9.712694e-01   p_joint 1.533333e-03

Joint ci ratio: 1.639200e-01	ci left: 1.416737e-03	ci right 1.672253e-03	k: 570	n:370000
Cons ci ratio: 1.108675e-03	ci left: 9.707133e-01	ci right 9.717928e-01	k: 359365	n:370000
KS ci ratio: 2.889140e-01	ci left: 4.255427e-04	ci right 5.716546e-04	k: 183	n:370000
PCDHB3   370000 perm   134 sec   (2760 perm/sec)   p_kst 4.945946e-04   p_cons 9.712568e-01   p_joint 1.540541e-03

Joint ci ratio: 1.409403e-01	ci left: 1.888370e-03	ci right 2.177202e-03	k: 771	n:380000
Cons ci ratio: 1.094842e-03	ci left: 9.706766e-01	ci right 9.717425e-01	k: 369061	n:380000
KS ci ratio: 2.850668e-01	ci left: 4.265552e-04	ci right 5.707134e-04	k: 188	n:380000
PCDHB3   380000 perm   139 sec   (2729 perm/sec)   p_kst 4.947368e-04   p_cons 9.712132e-01   p_joint 2.028947e-03

Joint ci ratio: 1.387987e-01	ci left: 1.899336e-03	ci right 2.185066e-03	k: 795	n:390000
Cons ci ratio: 1.081017e-03	ci left: 9.706677e-01	ci right 9.717201e-01	k: 378767	n:390000
KS ci ratio: 2.785112e-01	ci left: 4.370647e-04	ci right 5.807825e-04	k: 197	n:390000
PCDHB3   390000 perm   145 sec   (2697 perm/sec)   p_kst 5.051282e-04   p_cons 9.711974e-01   p_joint 2.038462e-03

Joint ci ratio: 1.316233e-01	ci left: 2.066843e-03	ci right 2.360443e-03	k: 884	n:400000
Cons ci ratio: 1.067560e-03	ci left: 9.706670e-01	ci right 9.717062e-01	k: 388476	n:400000
KS ci ratio: 2.743846e-01	ci left: 4.400985e-04	ci right 5.822999e-04	k: 203	n:400000
PCDHB3   400000 perm   150 sec   (2668 perm/sec)   p_kst 5.075000e-04   p_cons 9.711900e-01   p_joint 2.210000e-03

Joint ci ratio: 1.304504e-01	ci left: 2.054176e-03	ci right 2.343175e-03	k: 900	n:410000
Cons ci ratio: 1.054593e-03	ci left: 9.706663e-01	ci right 9.716929e-01	k: 398185	n:410000
KS ci ratio: 2.710826e-01	ci left: 4.407257e-04	ci right 5.811244e-04	k: 208	n:410000
PCDHB3   410000 perm   155 sec   (2638 perm/sec)   p_kst 5.073171e-04   p_cons 9.711829e-01   p_joint 2.195122e-03

Joint ci ratio: 1.293790e-01	ci left: 2.039820e-03	ci right 2.324261e-03	k: 915	n:420000
Cons ci ratio: 1.043150e-03	ci left: 9.706081e-01	ci right 9.716235e-01	k: 407870	n:420000
KS ci ratio: 2.697958e-01	ci left: 4.346711e-04	ci right 5.723724e-04	k: 210	n:420000
PCDHB3   420000 perm   161 sec   (2608 perm/sec)   p_kst 5.000000e-04   p_cons 9.711190e-01   p_joint 2.178571e-03

Joint ci ratio: 1.277163e-01	ci left: 2.046402e-03	ci right 2.327815e-03	k: 939	n:430000
Cons ci ratio: 1.030785e-03	ci left: 9.706231e-01	ci right 9.716264e-01	k: 417585	n:430000
KS ci ratio: 2.672746e-01	ci left: 4.332385e-04	ci right 5.689886e-04	k: 214	n:430000
PCDHB3   430000 perm   167 sec   (2578 perm/sec)   p_kst 4.976744e-04   p_cons 9.711279e-01   p_joint 2.183721e-03

Joint ci ratio: 1.261818e-01	ci left: 2.050506e-03	ci right 2.328842e-03	k: 962	n:440000
Cons ci ratio: 1.019180e-03	ci left: 9.706191e-01	ci right 9.716111e-01	k: 427292	n:440000
KS ci ratio: 2.648228e-01	ci left: 4.318768e-04	ci right 5.657529e-04	k: 218	n:440000
PCDHB3   440000 perm   173 sec   (2548 perm/sec)   p_kst 4.954545e-04   p_cons 9.711182e-01   p_joint 2.186364e-03

Joint ci ratio: 1.248918e-01	ci left: 2.047987e-03	ci right 2.322930e-03	k: 982	n:450000
Cons ci ratio: 1.007320e-03	ci left: 9.706512e-01	ci right 9.716316e-01	k: 437015	n:450000
KS ci ratio: 2.636227e-01	ci left: 4.264294e-04	ci right 5.579191e-04	k: 220	n:450000
PCDHB3   450000 perm   178 sec   (2521 perm/sec)   p_kst 4.888889e-04   p_cons 9.711444e-01   p_joint 2.182222e-03

Joint ci ratio: 1.287590e-01	ci left: 1.881368e-03	ci right 2.142360e-03	k: 924	n:460000
Cons ci ratio: 9.950511e-04	ci left: 9.707280e-01	ci right 9.716965e-01	k: 446759	n:460000
KS ci ratio: 2.624387e-01	ci left: 4.212202e-04	ci right 5.504245e-04	k: 222	n:460000
PCDHB3   460000 perm   185 sec   (2493 perm/sec)   p_kst 4.826087e-04   p_cons 9.712152e-01   p_joint 2.008696e-03

Joint ci ratio: 1.277282e-01	ci left: 1.872229e-03	ci right 2.129716e-03	k: 939	n:470000
Cons ci ratio: 9.846008e-04	ci left: 9.707222e-01	ci right 9.716805e-01	k: 456466	n:470000
KS ci ratio: 2.612705e-01	ci left: 4.162340e-04	ci right 5.432475e-04	k: 224	n:470000
PCDHB3   470000 perm   190 sec   (2467 perm/sec)   p_kst 4.765957e-04   p_cons 9.712043e-01   p_joint 1.997872e-03

Joint ci ratio: 1.268550e-01	ci left: 1.859445e-03	ci right 2.113294e-03	k: 952	n:480000
Cons ci ratio: 9.734929e-04	ci left: 9.707734e-01	ci right 9.717209e-01	k: 466200	n:480000
KS ci ratio: 2.595464e-01	ci left: 4.134044e-04	ci right 5.385871e-04	k: 227	n:480000
PCDHB3   480000 perm   197 sec   (2440 perm/sec)   p_kst 4.729167e-04   p_cons 9.712500e-01   p_joint 1.983333e-03

Joint ci ratio: 1.263933e-01	ci left: 1.835328e-03	ci right 2.084905e-03	k: 959	n:490000
Cons ci ratio: 9.633490e-04	ci left: 9.707876e-01	ci right 9.717252e-01	k: 475917	n:490000
KS ci ratio: 2.584162e-01	ci left: 4.087842e-04	ci right 5.319417e-04	k: 229	n:490000
PCDHB3   490000 perm   203 sec   (2415 perm/sec)   p_kst 4.673469e-04   p_cons 9.712592e-01   p_joint 1.957143e-03

Joint ci ratio: 1.250330e-01	ci left: 1.839301e-03	ci right 2.086527e-03	k: 980	n:500000
Cons ci ratio: 9.546767e-04	ci left: 9.707327e-01	ci right 9.716618e-01	k: 485600	n:500000
KS ci ratio: 2.551098e-01	ci left: 4.118364e-04	ci right 5.340733e-04	k: 235	n:500000
PCDHB3   500000 perm   209 sec   (2391 perm/sec)   p_kst 4.700000e-04   p_cons 9.712000e-01   p_joint 1.960000e-03

Joint ci ratio: 1.179038e-01	ci left: 2.035202e-03	ci right 2.292075e-03	k: 1102	n:510000
Cons ci ratio: 9.453364e-04	ci left: 9.707334e-01	ci right 9.716534e-01	k: 495310	n:510000
KS ci ratio: 2.529751e-01	ci left: 4.111049e-04	ci right 5.319428e-04	k: 239	n:510000
PCDHB3   510000 perm   215 sec   (2367 perm/sec)   p_kst 4.686275e-04   p_cons 9.711961e-01   p_joint 2.160784e-03

Joint ci ratio: 1.164861e-01	ci left: 2.046465e-03	ci right 2.301440e-03	k: 1129	n:520000
Cons ci ratio: 9.345584e-04	ci left: 9.708368e-01	ci right 9.717464e-01	k: 505073	n:520000
KS ci ratio: 2.493641e-01	ci left: 4.158134e-04	ci right 5.360200e-04	k: 246	n:520000
PCDHB3   520000 perm   222 sec   (2344 perm/sec)   p_kst 4.730769e-04   p_cons 9.712942e-01   p_joint 2.171154e-03

Joint ci ratio: 1.147709e-01	ci left: 2.070149e-03	ci right 2.324021e-03	k: 1163	n:530000
Cons ci ratio: 9.249456e-04	ci left: 9.708869e-01	ci right 9.717872e-01	k: 514810	n:530000
KS ci ratio: 2.459035e-01	ci left: 4.203560e-04	ci right 5.399318e-04	k: 253	n:530000
PCDHB3   530000 perm   228 sec   (2321 perm/sec)   p_kst 4.773585e-04   p_cons 9.713396e-01   p_joint 2.194340e-03

Joint ci ratio: 1.138458e-01	ci left: 2.065992e-03	ci right 2.317174e-03	k: 1182	n:540000
Cons ci ratio: 9.154992e-04	ci left: 9.709426e-01	ci right 9.718338e-01	k: 524551	n:540000
KS ci ratio: 2.439900e-01	ci left: 4.195244e-04	ci right 5.377942e-04	k: 257	n:540000
PCDHB3   540000 perm   235 sec   (2298 perm/sec)   p_kst 4.759259e-04   p_cons 9.713907e-01   p_joint 2.188889e-03

Joint ci ratio: 1.126613e-01	ci left: 2.072596e-03	ci right 2.321785e-03	k: 1207	n:550000
Cons ci ratio: 9.073131e-04	ci left: 9.709359e-01	ci right 9.718191e-01	k: 534259	n:550000
KS ci ratio: 2.416595e-01	ci left: 4.204345e-04	ci right 5.376591e-04	k: 262	n:550000
PCDHB3   550000 perm   242 sec   (2274 perm/sec)   p_kst 4.763636e-04   p_cons 9.713800e-01   p_joint 2.194545e-03

Joint ci ratio: 1.118773e-01	ci left: 2.065089e-03	ci right 2.311535e-03	k: 1224	n:560000
Cons ci ratio: 8.987939e-04	ci left: 9.709637e-01	ci right 9.718386e-01	k: 543986	n:560000
KS ci ratio: 2.389490e-01	ci left: 4.229960e-04	ci right 5.394161e-04	k: 268	n:560000
PCDHB3   560000 perm   249 sec   (2252 perm/sec)   p_kst 4.785714e-04   p_cons 9.714036e-01   p_joint 2.185714e-03

Joint ci ratio: 1.108415e-01	ci left: 2.068087e-03	ci right 2.312455e-03	k: 1247	n:570000
Cons ci ratio: 8.910723e-04	ci left: 9.709552e-01	ci right 9.718225e-01	k: 553693	n:570000
KS ci ratio: 2.346266e-01	ci left: 4.320785e-04	ci right 5.485350e-04	k: 278	n:570000
PCDHB3   570000 perm   256 sec   (2230 perm/sec)   p_kst 4.877193e-04   p_cons 9.713912e-01   p_joint 2.187719e-03

Joint ci ratio: 1.097043e-01	ci left: 2.076022e-03	ci right 2.318649e-03	k: 1273	n:580000
Cons ci ratio: 8.842035e-04	ci left: 9.709053e-01	ci right 9.717658e-01	k: 563376	n:580000
KS ci ratio: 2.321435e-01	ci left: 4.343689e-04	ci right 5.500260e-04	k: 284	n:580000
PCDHB3   580000 perm   262 sec   (2210 perm/sec)   p_kst 4.896552e-04   p_cons 9.713379e-01   p_joint 2.194828e-03

Joint ci ratio: 1.084759e-01	ci left: 2.088647e-03	ci right 2.329842e-03	k: 1302	n:590000
Cons ci ratio: 8.768213e-04	ci left: 9.708998e-01	ci right 9.717532e-01	k: 573084	n:590000
KS ci ratio: 2.293437e-01	ci left: 4.381854e-04	ci right 5.532524e-04	k: 291	n:590000
PCDHB3   590000 perm   270 sec   (2189 perm/sec)   p_kst 4.932203e-04   p_cons 9.713288e-01   p_joint 2.206780e-03

Joint ci ratio: 1.075310e-01	ci left: 2.091134e-03	ci right 2.330379e-03	k: 1325	n:600000
Cons ci ratio: 8.687362e-04	ci left: 9.709516e-01	ci right 9.717971e-01	k: 582826	n:600000
KS ci ratio: 2.266428e-01	ci left: 4.418828e-04	ci right 5.563633e-04	k: 298	n:600000
PCDHB3   600000 perm   277 sec   (2170 perm/sec)   p_kst 4.966667e-04   p_cons 9.713767e-01   p_joint 2.208333e-03

Joint ci ratio: 1.068088e-01	ci left: 2.085570e-03	ci right 2.322476e-03	k: 1343	n:610000
Cons ci ratio: 8.605378e-04	ci left: 9.710232e-01	ci right 9.718608e-01	k: 592581	n:610000
KS ci ratio: 2.244022e-01	ci left: 4.439193e-04	ci right 5.576333e-04	k: 304	n:610000
PCDHB3   610000 perm   284 sec   (2150 perm/sec)   p_kst 4.983607e-04   p_cons 9.714443e-01   p_joint 2.201639e-03

Joint ci ratio: 1.059064e-01	ci left: 2.088042e-03	ci right 2.323099e-03	k: 1366	n:620000
Cons ci ratio: 8.542005e-04	ci left: 9.709853e-01	ci right 9.718167e-01	k: 602270	n:620000
KS ci ratio: 2.225852e-01	ci left: 4.443724e-04	ci right 5.571544e-04	k: 309	n:620000
PCDHB3   620000 perm   291 sec   (2131 perm/sec)   p_kst 4.983871e-04   p_cons 9.714032e-01   p_joint 2.203226e-03

Joint ci ratio: 1.049886e-01	ci left: 2.091990e-03	ci right 2.325324e-03	k: 1390	n:630000
Cons ci ratio: 8.475881e-04	ci left: 9.709759e-01	ci right 9.718008e-01	k: 611976	n:630000
KS ci ratio: 2.197670e-01	ci left: 4.493140e-04	ci right 5.617113e-04	k: 317	n:630000
PCDHB3   630000 perm   298 sec   (2112 perm/sec)   p_kst 5.031746e-04   p_cons 9.713905e-01   p_joint 2.206349e-03

Joint ci ratio: 1.042051e-01	ci left: 2.091256e-03	ci right 2.322662e-03	k: 1411	n:640000
Cons ci ratio: 8.402992e-04	ci left: 9.710218e-01	ci right 9.718396e-01	k: 621717	n:640000
KS ci ratio: 2.173871e-01	ci left: 4.526323e-04	ci right 5.644698e-04	k: 324	n:640000
PCDHB3   640000 perm   306 sec   (2093 perm/sec)   p_kst 5.062500e-04   p_cons 9.714328e-01   p_joint 2.204688e-03

Joint ci ratio: 1.034026e-01	ci left: 2.092051e-03	ci right 2.321653e-03	k: 1433	n:650000
Cons ci ratio: 8.338638e-04	ci left: 9.710214e-01	ci right 9.718329e-01	k: 631429	n:650000
KS ci ratio: 2.154077e-01	ci left: 4.543993e-04	ci right 5.655158e-04	k: 330	n:650000
PCDHB3   650000 perm   313 sec   (2075 perm/sec)   p_kst 5.076923e-04   p_cons 9.714292e-01   p_joint 2.204615e-03

Joint ci ratio: 1.026538e-01	ci left: 2.091351e-03	ci right 2.319114e-03	k: 1454	n:660000
Cons ci ratio: 8.280708e-04	ci left: 9.709874e-01	ci right 9.717933e-01	k: 641119	n:660000
KS ci ratio: 2.150837e-01	ci left: 4.489478e-04	ci right 5.585443e-04	k: 331	n:660000
PCDHB3   660000 perm   321 sec   (2057 perm/sec)   p_kst 5.015152e-04   p_cons 9.713924e-01   p_joint 2.203030e-03

Joint ci ratio: 1.018519e-01	ci left: 2.093587e-03	ci right 2.319706e-03	k: 1477	n:670000
Cons ci ratio: 8.220204e-04	ci left: 9.709801e-01	ci right 9.717800e-01	k: 650826	n:670000
KS ci ratio: 2.137997e-01	ci left: 4.478966e-04	ci right 5.564982e-04	k: 335	n:670000
PCDHB3   670000 perm   329 sec   (2037 perm/sec)   p_kst 5.000000e-04   p_cons 9.713821e-01   p_joint 2.204478e-03

Joint ci ratio: 1.007327e-01	ci left: 2.110100e-03	ci right 2.335350e-03	k: 1510	n:680000
Cons ci ratio: 8.163164e-04	ci left: 9.709582e-01	ci right 9.717525e-01	k: 660523	n:680000
KS ci ratio: 2.122265e-01	ci left: 4.482706e-04	ci right 5.560590e-04	k: 340	n:680000
PCDHB3   680000 perm   337 sec   (2019 perm/sec)   p_kst 5.000000e-04   p_cons 9.713574e-01   p_joint 2.220588e-03

Joint ci ratio: 1.002040e-01	ci left: 2.102124e-03	ci right 2.325276e-03	k: 1526	n:690000
Cons ci ratio: 8.103280e-04	ci left: 9.709646e-01	ci right 9.717532e-01	k: 670239	n:690000
KS ci ratio: 2.109928e-01	ci left: 4.472638e-04	ci right 5.541040e-04	k: 344	n:690000
PCDHB3   690000 perm   345 sec   (2002 perm/sec)   p_kst 4.985507e-04   p_cons 9.713609e-01   p_joint 2.211594e-03

Joint ci ratio: 9.965122e-02	ci left: 2.095772e-03	ci right 2.316951e-03	k: 1543	n:700000
Cons ci ratio: 8.045728e-04	ci left: 9.709637e-01	ci right 9.717467e-01	k: 679950	n:700000
KS ci ratio: 2.091815e-01	ci left: 4.489948e-04	ci right 5.552100e-04	k: 350	n:700000
PCDHB3   700000 perm   353 sec   (1985 perm/sec)   p_kst 5.000000e-04   p_cons 9.713571e-01   p_joint 2.204286e-03

Joint ci ratio: 9.891712e-02	ci left: 2.097845e-03	ci right 2.317516e-03	k: 1566	n:710000
Cons ci ratio: 7.989586e-04	ci left: 9.709615e-01	ci right 9.717389e-01	k: 689660	n:710000
KS ci ratio: 2.085885e-01	ci left: 4.453404e-04	ci right 5.503543e-04	k: 352	n:710000
PCDHB3   710000 perm   361 sec   (1968 perm/sec)   p_kst 4.957746e-04   p_cons 9.713521e-01   p_joint 2.205634e-03

Joint ci ratio: 9.804464e-02	ci left: 2.106639e-03	ci right 2.325174e-03	k: 1594	n:720000
Cons ci ratio: 7.930842e-04	ci left: 9.709858e-01	ci right 9.717576e-01	k: 699389	n:720000
KS ci ratio: 2.080006e-01	ci left: 4.417879e-04	ci right 5.456330e-04	k: 354	n:720000
PCDHB3   720000 perm   369 sec   (1952 perm/sec)   p_kst 4.916667e-04   p_cons 9.713736e-01   p_joint 2.213889e-03

Joint ci ratio: 1.059629e-01	ci left: 1.772057e-03	ci right 1.971655e-03	k: 1365	n:730000
Cons ci ratio: 7.876086e-04	ci left: 9.709903e-01	ci right 9.717567e-01	k: 709104	n:730000
KS ci ratio: 2.054125e-01	ci left: 4.474268e-04	ci right 5.511244e-04	k: 363	n:730000
PCDHB3   730000 perm   377 sec   (1936 perm/sec)   p_kst 4.972603e-04   p_cons 9.713753e-01   p_joint 1.869863e-03

Joint ci ratio: 9.669011e-02	ci left: 2.109033e-03	ci right 2.324623e-03	k: 1639	n:740000
Cons ci ratio: 7.826250e-04	ci left: 9.709674e-01	ci right 9.717289e-01	k: 718799	n:740000
KS ci ratio: 2.029186e-01	ci left: 4.529211e-04	ci right 5.564597e-04	k: 372	n:740000
PCDHB3   740000 perm   385 sec   (1920 perm/sec)   p_kst 5.027027e-04   p_cons 9.713500e-01   p_joint 2.214865e-03

Joint ci ratio: 1.047435e-01	ci left: 1.766344e-03	ci right 1.962869e-03	k: 1397	n:750000
Cons ci ratio: 7.775108e-04	ci left: 9.709612e-01	ci right 9.717178e-01	k: 728506	n:750000
KS ci ratio: 2.026477e-01	ci left: 4.481476e-04	ci right 5.504414e-04	k: 373	n:750000
PCDHB3   750000 perm   394 sec   (1904 perm/sec)   p_kst 4.973333e-04   p_cons 9.713413e-01   p_joint 1.862667e-03

Joint ci ratio: 1.040757e-01	ci left: 1.766169e-03	ci right 1.961344e-03	k: 1415	n:760000
Cons ci ratio: 7.723312e-04	ci left: 9.709672e-01	ci right 9.717187e-01	k: 738222	n:760000
KS ci ratio: 2.005141e-01	ci left: 4.522461e-04	ci right 5.542555e-04	k: 381	n:760000
PCDHB3   760000 perm   403 sec   (1888 perm/sec)   p_kst 5.013158e-04   p_cons 9.713447e-01   p_joint 1.861842e-03

Joint ci ratio: 1.034205e-01	ci left: 1.766001e-03	ci right 1.959855e-03	k: 1433	n:770000
Cons ci ratio: 7.667883e-04	ci left: 9.710070e-01	ci right 9.717531e-01	k: 747964	n:770000
KS ci ratio: 1.987016e-01	ci left: 4.550094e-04	ci right 5.566019e-04	k: 388	n:770000
PCDHB3   770000 perm   411 sec   (1873 perm/sec)   p_kst 5.038961e-04   p_cons 9.713818e-01   p_joint 1.861039e-03

Joint ci ratio: 1.026713e-01	ci left: 1.769590e-03	ci right 1.962345e-03	k: 1454	n:780000
Cons ci ratio: 7.623103e-04	ci left: 9.709761e-01	ci right 9.717178e-01	k: 757652	n:780000
KS ci ratio: 1.974367e-01	ci left: 4.552683e-04	ci right 5.561938e-04	k: 393	n:780000
PCDHB3   780000 perm   420 sec   (1857 perm/sec)   p_kst 5.038462e-04   p_cons 9.713487e-01   p_joint 1.864103e-03

Joint ci ratio: 1.021115e-01	ci left: 1.766924e-03	ci right 1.958277e-03	k: 1470	n:790000
Cons ci ratio: 7.573234e-04	ci left: 9.709893e-01	ci right 9.717262e-01	k: 767374	n:790000
KS ci ratio: 1.961958e-01	ci left: 4.555227e-04	ci right 5.557939e-04	k: 398	n:790000
PCDHB3   790000 perm   429 sec   (1842 perm/sec)   p_kst 5.037975e-04   p_cons 9.713595e-01   p_joint 1.860759e-03

Joint ci ratio: 8.349770e-02	ci left: 2.632752e-03	ci right 2.863372e-03	k: 2197	n:800000
Cons ci ratio: 7.527710e-04	ci left: 9.709771e-01	ci right 9.717095e-01	k: 777076	n:800000
KS ci ratio: 1.944968e-01	ci left: 4.581507e-04	ci right 5.580238e-04	k: 405	n:800000
PCDHB3   800000 perm   438 sec   (1828 perm/sec)   p_kst 5.062500e-04   p_cons 9.713450e-01   p_joint 2.746250e-03

Joint ci ratio: 8.308323e-02	ci left: 2.626843e-03	ci right 2.855748e-03	k: 2219	n:810000
Cons ci ratio: 7.486147e-04	ci left: 9.709415e-01	ci right 9.716699e-01	k: 786759	n:810000
KS ci ratio: 1.933102e-01	ci left: 4.583678e-04	ci right 5.576068e-04	k: 410	n:810000
PCDHB3   810000 perm   447 sec   (1813 perm/sec)   p_kst 5.061728e-04   p_cons 9.713074e-01   p_joint 2.739506e-03

Joint ci ratio: 8.250897e-02	ci left: 2.631831e-03	ci right 2.859509e-03	k: 2250	n:820000
Cons ci ratio: 7.437765e-04	ci left: 9.709633e-01	ci right 9.716870e-01	k: 796488	n:820000
KS ci ratio: 1.921449e-01	ci left: 4.585813e-04	ci right 5.571981e-04	k: 415	n:820000
PCDHB3   820000 perm   456 sec   (1798 perm/sec)   p_kst 5.060976e-04   p_cons 9.713268e-01   p_joint 2.743902e-03

Joint ci ratio: 8.200052e-02	ci left: 2.633163e-03	ci right 2.859486e-03	k: 2278	n:830000
Cons ci ratio: 7.388867e-04	ci left: 9.709955e-01	ci right 9.717144e-01	k: 806226	n:830000
KS ci ratio: 1.910005e-01	ci left: 4.587914e-04	ci right 5.567976e-04	k: 420	n:830000
PCDHB3   830000 perm   465 sec   (1784 perm/sec)   p_kst 5.060241e-04   p_cons 9.713566e-01   p_joint 2.744578e-03

Joint ci ratio: 8.155454e-02	ci left: 2.630969e-03	ci right 2.855815e-03	k: 2303	n:840000
Cons ci ratio: 7.345784e-04	ci left: 9.709898e-01	ci right 9.717045e-01	k: 815933	n:840000
KS ci ratio: 1.905488e-01	ci left: 4.555967e-04	ci right 5.526637e-04	k: 422	n:840000
PCDHB3   840000 perm   474 sec   (1771 perm/sec)   p_kst 5.023810e-04   p_cons 9.713488e-01   p_joint 2.741667e-03

Joint ci ratio: 9.054965e-02	ci left: 2.100359e-03	ci right 2.300705e-03	k: 1869	n:850000
Cons ci ratio: 7.298351e-04	ci left: 9.710233e-01	ci right 9.717334e-01	k: 825673	n:850000
KS ci ratio: 1.903244e-01	ci left: 4.513571e-04	ci right 5.473943e-04	k: 423	n:850000
PCDHB3   850000 perm   484 sec   (1758 perm/sec)   p_kst 4.976471e-04   p_cons 9.713800e-01   p_joint 2.198824e-03

Joint ci ratio: 9.004551e-02	ci left: 2.099803e-03	ci right 2.298922e-03	k: 1890	n:860000
Cons ci ratio: 7.255156e-04	ci left: 9.710303e-01	ci right 9.717362e-01	k: 835391	n:860000
KS ci ratio: 1.889918e-01	ci left: 4.527542e-04	ci right 5.483369e-04	k: 429	n:860000
PCDHB3   860000 perm   493 sec   (1745 perm/sec)   p_kst 4.988372e-04   p_cons 9.713849e-01   p_joint 2.197674e-03

Joint ci ratio: 8.027597e-02	ci left: 2.623582e-03	ci right 2.844117e-03	k: 2377	n:870000
Cons ci ratio: 7.216446e-04	ci left: 9.710083e-01	ci right 9.717104e-01	k: 845084	n:870000
KS ci ratio: 1.872576e-01	ci left: 4.563126e-04	ci right 5.516620e-04	k: 437	n:870000
PCDHB3   870000 perm   502 sec   (1732 perm/sec)   p_kst 5.022989e-04   p_cons 9.713609e-01   p_joint 2.732184e-03

Joint ci ratio: 7.980746e-02	ci left: 2.624950e-03	ci right 2.844253e-03	k: 2405	n:880000
Cons ci ratio: 7.177466e-04	ci left: 9.709936e-01	ci right 9.716919e-01	k: 854783	n:880000
KS ci ratio: 1.859879e-01	ci left: 4.576269e-04	ci right 5.525294e-04	k: 443	n:880000
PCDHB3   880000 perm   512 sec   (1719 perm/sec)   p_kst 5.034091e-04   p_cons 9.713443e-01   p_joint 2.732955e-03

Joint ci ratio: 7.952746e-02	ci left: 2.614176e-03	ci right 2.831777e-03	k: 2422	n:890000
Cons ci ratio: 7.133922e-04	ci left: 9.710200e-01	ci right 9.717140e-01	k: 864518	n:890000
KS ci ratio: 1.849495e-01	ci left: 4.578422e-04	ci right 5.521998e-04	k: 448	n:890000
PCDHB3   890000 perm   522 sec   (1705 perm/sec)   p_kst 5.033708e-04   p_cons 9.713685e-01   p_joint 2.721348e-03

Joint ci ratio: 7.895889e-02	ci left: 2.623249e-03	ci right 2.839971e-03	k: 2457	n:900000
Cons ci ratio: 7.096966e-04	ci left: 9.709999e-01	ci right 9.716904e-01	k: 874212	n:900000
KS ci ratio: 1.829232e-01	ci left: 4.633547e-04	ci right 5.576862e-04	k: 458	n:900000
PCDHB3   900000 perm   532 sec   (1693 perm/sec)   p_kst 5.088889e-04   p_cons 9.713467e-01   p_joint 2.730000e-03

Joint ci ratio: 7.852878e-02	ci left: 2.623508e-03	ci right 2.839017e-03	k: 2484	n:910000
Cons ci ratio: 7.056116e-04	ci left: 9.710157e-01	ci right 9.717022e-01	k: 883938	n:910000
KS ci ratio: 1.823285e-01	ci left: 4.614089e-04	ci right 5.550051e-04	k: 461	n:910000
PCDHB3   910000 perm   541 sec   (1681 perm/sec)   p_kst 5.065934e-04   p_cons 9.713604e-01   p_joint 2.729670e-03

Joint ci ratio: 7.798121e-02	ci left: 2.632291e-03	ci right 2.846946e-03	k: 2519	n:920000
Cons ci ratio: 7.016785e-04	ci left: 9.710246e-01	ci right 9.717072e-01	k: 893658	n:920000
KS ci ratio: 1.811559e-01	ci left: 4.626186e-04	ci right 5.557905e-04	k: 467	n:920000
PCDHB3   920000 perm   551 sec   (1669 perm/sec)   p_kst 5.076087e-04   p_cons 9.713674e-01   p_joint 2.738043e-03

Joint ci ratio: 7.752103e-02	ci left: 2.635618e-03	ci right 2.849218e-03	k: 2549	n:930000
Cons ci ratio: 6.980801e-04	ci left: 9.710116e-01	ci right 9.716908e-01	k: 903358	n:930000
KS ci ratio: 1.796268e-01	ci left: 4.658580e-04	ci right 5.588043e-04	k: 475	n:930000
PCDHB3   930000 perm   561 sec   (1657 perm/sec)   p_kst 5.107527e-04   p_cons 9.713527e-01   p_joint 2.740860e-03

Joint ci ratio: 7.717395e-02	ci left: 2.631574e-03	ci right 2.843849e-03	k: 2572	n:940000
Cons ci ratio: 6.944966e-04	ci left: 9.710022e-01	ci right 9.716779e-01	k: 913061	n:940000
KS ci ratio: 1.792509e-01	ci left: 4.629341e-04	ci right 5.550828e-04	k: 477	n:940000
PCDHB3   940000 perm   571 sec   (1646 perm/sec)   p_kst 5.074468e-04   p_cons 9.713415e-01   p_joint 2.736170e-03

Joint ci ratio: 7.668354e-02	ci left: 2.637942e-03	ci right 2.849318e-03	k: 2605	n:950000
Cons ci ratio: 6.909545e-04	ci left: 9.709941e-01	ci right 9.716662e-01	k: 922765	n:950000
KS ci ratio: 1.785057e-01	ci left: 4.620831e-04	ci right 5.536387e-04	k: 481	n:950000
PCDHB3   950000 perm   581 sec   (1634 perm/sec)   p_kst 5.063158e-04   p_cons 9.713316e-01   p_joint 2.742105e-03

Joint ci ratio: 7.620236e-02	ci left: 2.644182e-03	ci right 2.854670e-03	k: 2638	n:960000
Cons ci ratio: 6.874788e-04	ci left: 9.709850e-01	ci right 9.716538e-01	k: 932468	n:960000
KS ci ratio: 1.777697e-01	ci left: 4.612506e-04	ci right 5.522239e-04	k: 485	n:960000
PCDHB3   960000 perm   592 sec   (1623 perm/sec)   p_kst 5.052083e-04   p_cons 9.713208e-01   p_joint 2.747917e-03

Joint ci ratio: 7.584405e-02	ci left: 2.642205e-03	ci right 2.851503e-03	k: 2663	n:970000
Cons ci ratio: 6.839411e-04	ci left: 9.709855e-01	ci right 9.716508e-01	k: 942180	n:970000
KS ci ratio: 1.765030e-01	ci left: 4.633920e-04	ci right 5.540669e-04	k: 492	n:970000
PCDHB3   970000 perm   602 sec   (1612 perm/sec)   p_kst 5.072165e-04   p_cons 9.713196e-01   p_joint 2.745361e-03

Joint ci ratio: 7.530844e-02	ci left: 2.653287e-03	ci right 2.861914e-03	k: 2701	n:980000
Cons ci ratio: 6.805572e-04	ci left: 9.709778e-01	ci right 9.716398e-01	k: 951884	n:980000
KS ci ratio: 1.749133e-01	ci left: 4.674434e-04	ci right 5.580002e-04	k: 501	n:980000
PCDHB3   980000 perm   612 sec   (1600 perm/sec)   p_kst 5.112245e-04   p_cons 9.713102e-01   p_joint 2.756122e-03

Joint ci ratio: 7.482510e-02	ci left: 2.661177e-03	ci right 2.869022e-03	k: 2736	n:990000
Cons ci ratio: 6.770756e-04	ci left: 9.709824e-01	ci right 9.716411e-01	k: 961600	n:990000
KS ci ratio: 1.738772e-01	ci left: 4.685179e-04	ci right 5.586887e-04	k: 507	n:990000
PCDHB3   990000 perm   623 sec   (1590 perm/sec)   p_kst 5.121212e-04   p_cons 9.713131e-01   p_joint 2.763636e-03

Joint ci ratio: 7.453993e-02	ci left: 2.655172e-03	ci right 2.861724e-03	k: 2757	n:1000000
Cons ci ratio: 6.739129e-04	ci left: 9.709649e-01	ci right 9.716204e-01	k: 971294	n:1000000
KS ci ratio: 1.730277e-01	ci left: 4.686156e-04	ci right 5.583187e-04	k: 512	n:1000000
PCDHB3   1000000 perm   633 sec   (1579 perm/sec)   p_kst 5.120000e-04   p_cons 9.712940e-01   p_joint 2.757000e-03

Joint ci ratio: 7.413772e-02	ci left: 2.658035e-03	ci right 2.863645e-03	k: 2787	n:1010000
Cons ci ratio: 6.705199e-04	ci left: 9.709705e-01	ci right 9.716228e-01	k: 981011	n:1010000
KS ci ratio: 1.720246e-01	ci left: 4.696600e-04	ci right 5.589876e-04	k: 518	n:1010000
PCDHB3   1010000 perm   644 sec   (1568 perm/sec)   p_kst 5.128713e-04   p_cons 9.712980e-01   p_joint 2.759406e-03

Joint ci ratio: 7.386031e-02	ci left: 2.652182e-03	ci right 2.856540e-03	k: 2808	n:1020000
Cons ci ratio: 6.675061e-04	ci left: 9.709485e-01	ci right 9.715978e-01	k: 990700	n:1020000
KS ci ratio: 1.712019e-01	ci left: 4.697469e-04	ci right 5.586197e-04	k: 523	n:1020000
PCDHB3   1020000 perm   655 sec   (1557 perm/sec)   p_kst 5.127451e-04   p_cons 9.712745e-01   p_joint 2.752941e-03

Joint ci ratio: 7.350790e-02	ci left: 2.652164e-03	ci right 2.855503e-03	k: 2835	n:1030000
Cons ci ratio: 6.641162e-04	ci left: 9.709621e-01	ci right 9.716081e-01	k: 1000425	n:1030000
KS ci ratio: 1.708764e-01	ci left: 4.670448e-04	ci right 5.552210e-04	k: 525	n:1030000
PCDHB3   1030000 perm   666 sec   (1547 perm/sec)   p_kst 5.097087e-04   p_cons 9.712864e-01   p_joint 2.752427e-03

Joint ci ratio: 7.316049e-02	ci left: 2.652147e-03	ci right 2.854484e-03	k: 2862	n:1040000
Cons ci ratio: 6.608684e-04	ci left: 9.709677e-01	ci right 9.716105e-01	k: 1010142	n:1040000
KS ci ratio: 1.702304e-01	ci left: 4.662359e-04	ci right 5.538926e-04	k: 529	n:1040000
PCDHB3   1040000 perm   677 sec   (1537 perm/sec)   p_kst 5.086538e-04   p_cons 9.712904e-01   p_joint 2.751923e-03

Joint ci ratio: 7.278008e-02	ci left: 2.654939e-03	ci right 2.856391e-03	k: 2892	n:1050000
Cons ci ratio: 6.578811e-04	ci left: 9.709549e-01	ci right 9.715948e-01	k: 1019840	n:1050000
KS ci ratio: 1.695918e-01	ci left: 4.654431e-04	ci right 5.525888e-04	k: 533	n:1050000
PCDHB3   1050000 perm   688 sec   (1527 perm/sec)   p_kst 5.076190e-04   p_cons 9.712762e-01   p_joint 2.754286e-03

Joint ci ratio: 7.246772e-02	ci left: 2.653049e-03	ci right 2.853457e-03	k: 2917	n:1060000
Cons ci ratio: 6.545132e-04	ci left: 9.709785e-01	ci right 9.716151e-01	k: 1029576	n:1060000
KS ci ratio: 1.689602e-01	ci left: 4.646658e-04	ci right 5.513090e-04	k: 537	n:1060000
PCDHB3   1060000 perm   699 sec   (1517 perm/sec)   p_kst 5.066038e-04   p_cons 9.712981e-01   p_joint 2.751887e-03

Joint ci ratio: 7.213478e-02	ci left: 2.653032e-03	ci right 2.852479e-03	k: 2944	n:1070000
Cons ci ratio: 6.513926e-04	ci left: 9.709847e-01	ci right 9.716183e-01	k: 1039294	n:1070000
KS ci ratio: 1.677176e-01	ci left: 4.674849e-04	ci right 5.539479e-04	k: 545	n:1070000
PCDHB3   1070000 perm   710 sec   (1507 perm/sec)   p_kst 5.093458e-04   p_cons 9.713028e-01   p_joint 2.751402e-03

Joint ci ratio: 7.174590e-02	ci left: 2.657563e-03	ci right 2.856229e-03	k: 2976	n:1080000
Cons ci ratio: 6.482301e-04	ci left: 9.709983e-01	ci right 9.716288e-01	k: 1049020	n:1080000
KS ci ratio: 1.663519e-01	ci left: 4.711414e-04	ci right 5.575000e-04	k: 554	n:1080000
PCDHB3   1080000 perm   722 sec   (1497 perm/sec)   p_kst 5.129630e-04   p_cons 9.713148e-01   p_joint 2.755556e-03

Joint ci ratio: 7.565653e-02	ci left: 2.363908e-03	ci right 2.550678e-03	k: 2677	n:1090000
Cons ci ratio: 6.452512e-04	ci left: 9.709996e-01	ci right 9.716272e-01	k: 1058733	n:1090000
KS ci ratio: 1.657557e-01	ci left: 4.703362e-04	ci right 5.562074e-04	k: 558	n:1090000
PCDHB3   1090000 perm   733 sec   (1487 perm/sec)   p_kst 5.119266e-04   p_cons 9.713147e-01   p_joint 2.455963e-03

Joint ci ratio: 7.536175e-02	ci left: 2.361149e-03	ci right 2.546941e-03	k: 2698	n:1100000
Cons ci ratio: 6.419043e-04	ci left: 9.710366e-01	ci right 9.716610e-01	k: 1068485	n:1100000
KS ci ratio: 1.651659e-01	ci left: 4.695462e-04	ci right 5.549378e-04	k: 562	n:1100000
PCDHB3   1100000 perm   745 sec   (1476 perm/sec)   p_kst 5.109091e-04   p_cons 9.713500e-01   p_joint 2.452727e-03

Joint ci ratio: 7.502892e-02	ci left: 2.361092e-03	ci right 2.546024e-03	k: 2722	n:1110000
Cons ci ratio: 6.389079e-04	ci left: 9.710466e-01	ci right 9.716681e-01	k: 1078208	n:1110000
KS ci ratio: 1.645824e-01	ci left: 4.687709e-04	ci right 5.536906e-04	k: 566	n:1110000
PCDHB3   1110000 perm   757 sec   (1467 perm/sec)   p_kst 5.099099e-04   p_cons 9.713586e-01   p_joint 2.452252e-03

Joint ci ratio: 7.468684e-02	ci left: 2.361914e-03	ci right 2.546031e-03	k: 2747	n:1120000
Cons ci ratio: 6.360858e-04	ci left: 9.710448e-01	ci right 9.716635e-01	k: 1087918	n:1120000
KS ci ratio: 1.638615e-01	ci left: 4.688663e-04	ci right 5.533945e-04	k: 571	n:1120000
PCDHB3   1120000 perm   768 sec   (1457 perm/sec)   p_kst 5.098214e-04   p_cons 9.713554e-01   p_joint 2.452679e-03

Joint ci ratio: 7.432253e-02	ci left: 2.364461e-03	ci right 2.547838e-03	k: 2774	n:1130000
Cons ci ratio: 6.335121e-04	ci left: 9.710243e-01	ci right 9.716405e-01	k: 1097607	n:1130000
KS ci ratio: 1.627273e-01	ci left: 4.715074e-04	ci right 5.558659e-04	k: 579	n:1130000
PCDHB3   1130000 perm   780 sec   (1449 perm/sec)   p_kst 5.123894e-04   p_cons 9.713336e-01   p_joint 2.454867e-03

Joint ci ratio: 7.408286e-02	ci left: 2.359217e-03	ci right 2.541572e-03	k: 2792	n:1140000
Cons ci ratio: 6.306512e-04	ci left: 9.710324e-01	ci right 9.716459e-01	k: 1107328	n:1140000
KS ci ratio: 1.623082e-01	ci left: 4.698959e-04	ci right 5.537284e-04	k: 582	n:1140000
PCDHB3   1140000 perm   792 sec   (1440 perm/sec)   p_kst 5.105263e-04   p_cons 9.713404e-01   p_joint 2.449123e-03

Joint ci ratio: 7.370108e-02	ci left: 2.363453e-03	ci right 2.545154e-03	k: 2821	n:1150000
Cons ci ratio: 6.279758e-04	ci left: 9.710273e-01	ci right 9.716381e-01	k: 1117034	n:1150000
KS ci ratio: 1.610695e-01	ci left: 4.733193e-04	ci right 5.570558e-04	k: 591	n:1150000
PCDHB3   1150000 perm   804 sec   (1431 perm/sec)   p_kst 5.139130e-04   p_cons 9.713339e-01   p_joint 2.453043e-03

Joint ci ratio: 6.918995e-02	ci left: 2.663985e-03	ci right 2.855752e-03	k: 3200	n:1160000
Cons ci ratio: 6.251502e-04	ci left: 9.710387e-01	ci right 9.716468e-01	k: 1126759	n:1160000
KS ci ratio: 1.601254e-01	ci left: 4.750310e-04	ci right 5.585303e-04	k: 598	n:1160000
PCDHB3   1160000 perm   815 sec   (1423 perm/sec)   p_kst 5.155172e-04   p_cons 9.713440e-01   p_joint 2.758621e-03

Joint ci ratio: 6.892141e-02	ci left: 2.662215e-03	ci right 2.853081e-03	k: 3225	n:1170000
Cons ci ratio: 6.222763e-04	ci left: 9.710577e-01	ci right 9.716630e-01	k: 1136493	n:1170000
KS ci ratio: 1.594613e-01	ci left: 4.750735e-04	ci right 5.582008e-04	k: 603	n:1170000
PCDHB3   1170000 perm   827 sec   (1414 perm/sec)   p_kst 5.153846e-04   p_cons 9.713615e-01   p_joint 2.756410e-03

Joint ci ratio: 6.866656e-02	ci left: 2.659643e-03	ci right 2.849591e-03	k: 3249	n:1180000
Cons ci ratio: 6.197340e-04	ci left: 9.710500e-01	ci right 9.716528e-01	k: 1146196	n:1180000
KS ci ratio: 1.588054e-01	ci left: 4.751160e-04	ci right 5.578762e-04	k: 608	n:1180000
PCDHB3   1180000 perm   840 sec   (1405 perm/sec)   p_kst 5.152542e-04   p_cons 9.713525e-01   p_joint 2.753390e-03

Joint ci ratio: 6.827873e-02	ci left: 2.667853e-03	ci right 2.857269e-03	k: 3286	n:1190000
Cons ci ratio: 6.168965e-04	ci left: 9.710719e-01	ci right 9.716720e-01	k: 1155934	n:1190000
KS ci ratio: 1.573899e-01	ci left: 4.800016e-04	ci right 5.627971e-04	k: 619	n:1190000
PCDHB3   1190000 perm   852 sec   (1397 perm/sec)   p_kst 5.201681e-04   p_cons 9.713731e-01   p_joint 2.761345e-03

Joint ci ratio: 6.798975e-02	ci left: 2.668557e-03	ci right 2.857189e-03	k: 3314	n:1200000
Cons ci ratio: 6.145666e-04	ci left: 9.710508e-01	ci right 9.716486e-01	k: 1165621	n:1200000
KS ci ratio: 1.567591e-01	ci left: 4.800044e-04	ci right 5.624375e-04	k: 624	n:1200000
PCDHB3   1200000 perm   864 sec   (1389 perm/sec)   p_kst 5.200000e-04   p_cons 9.713508e-01   p_joint 2.761667e-03

Joint ci ratio: 6.778579e-02	ci left: 2.662751e-03	ci right 2.850386e-03	k: 3334	n:1210000
Cons ci ratio: 6.123716e-04	ci left: 9.710201e-01	ci right 9.716157e-01	k: 1175296	n:1210000
KS ci ratio: 1.563844e-01	ci left: 4.784196e-04	ci right 5.603656e-04	k: 627	n:1210000
PCDHB3   1210000 perm   876 sec   (1381 perm/sec)   p_kst 5.181818e-04   p_cons 9.713190e-01   p_joint 2.755372e-03

Joint ci ratio: 6.749293e-02	ci left: 2.664293e-03	ci right 2.851194e-03	k: 3363	n:1220000
Cons ci ratio: 6.096969e-04	ci left: 9.710360e-01	ci right 9.716290e-01	k: 1185027	n:1220000
KS ci ratio: 1.555199e-01	ci left: 4.800120e-04	ci right 5.617339e-04	k: 634	n:1220000
PCDHB3   1220000 perm   889 sec   (1372 perm/sec)   p_kst 5.196721e-04   p_cons 9.713336e-01   p_joint 2.756557e-03

Joint ci ratio: 6.719392e-02	ci left: 2.666612e-03	ci right 2.852815e-03	k: 3393	n:1230000
Cons ci ratio: 6.072074e-04	ci left: 9.710377e-01	ci right 9.716283e-01	k: 1194741	n:1230000
KS ci ratio: 1.545492e-01	ci left: 4.823612e-04	ci right 5.639231e-04	k: 642	n:1230000
PCDHB3   1230000 perm   902 sec   (1364 perm/sec)   p_kst 5.219512e-04   p_cons 9.713341e-01   p_joint 2.758537e-03

Joint ci ratio: 6.688904e-02	ci left: 2.669688e-03	ci right 2.855227e-03	k: 3424	n:1240000
Cons ci ratio: 6.047832e-04	ci left: 9.710362e-01	ci right 9.716245e-01	k: 1204451	n:1240000
KS ci ratio: 1.539518e-01	ci left: 4.823479e-04	ci right 5.635631e-04	k: 647	n:1240000
PCDHB3   1240000 perm   914 sec   (1356 perm/sec)   p_kst 5.217742e-04   p_cons 9.713315e-01   p_joint 2.761290e-03

Joint ci ratio: 6.654968e-02	ci left: 2.675864e-03	ci right 2.860852e-03	k: 3459	n:1250000
Cons ci ratio: 6.021023e-04	ci left: 9.710613e-01	ci right 9.716469e-01	k: 1214194	n:1250000
KS ci ratio: 1.532440e-01	ci left: 4.831046e-04	ci right 5.640389e-04	k: 653	n:1250000
PCDHB3   1250000 perm   927 sec   (1348 perm/sec)   p_kst 5.224000e-04   p_cons 9.713552e-01   p_joint 2.767200e-03

Joint ci ratio: 7.021648e-02	ci left: 2.380802e-03	ci right 2.554830e-03	k: 3108	n:1260000
Cons ci ratio: 5.998412e-04	ci left: 9.710501e-01	ci right 9.716335e-01	k: 1223892	n:1260000
KS ci ratio: 1.531272e-01	ci left: 4.800336e-04	ci right 5.603865e-04	k: 654	n:1260000
PCDHB3   1260000 perm   940 sec   (1341 perm/sec)   p_kst 5.190476e-04   p_cons 9.713429e-01   p_joint 2.466667e-03

Joint ci ratio: 6.993585e-02	ci left: 2.381396e-03	ci right 2.554744e-03	k: 3133	n:1270000
Cons ci ratio: 5.974024e-04	ci left: 9.710580e-01	ci right 9.716391e-01	k: 1233614	n:1270000
KS ci ratio: 1.525461e-01	ci left: 4.800403e-04	ci right 5.600615e-04	k: 659	n:1270000
PCDHB3   1270000 perm   953 sec   (1333 perm/sec)   p_kst 5.188976e-04   p_cons 9.713496e-01   p_joint 2.466929e-03

Joint ci ratio: 6.959234e-02	ci left: 2.386588e-03	ci right 2.559426e-03	k: 3164	n:1280000
Cons ci ratio: 5.950767e-04	ci left: 9.710580e-01	ci right 9.716368e-01	k: 1243326	n:1280000
KS ci ratio: 1.519715e-01	ci left: 4.800474e-04	ci right 5.597410e-04	k: 664	n:1280000
PCDHB3   1280000 perm   966 sec   (1326 perm/sec)   p_kst 5.187500e-04   p_cons 9.713484e-01   p_joint 2.471875e-03

Joint ci ratio: 6.931910e-02	ci left: 2.387131e-03	ci right 2.559301e-03	k: 3189	n:1290000
Cons ci ratio: 5.930503e-04	ci left: 9.710322e-01	ci right 9.716090e-01	k: 1253005	n:1290000
KS ci ratio: 1.507297e-01	ci left: 4.845304e-04	ci right 5.642516e-04	k: 675	n:1290000
PCDHB3   1290000 perm   979 sec   (1318 perm/sec)   p_kst 5.232558e-04   p_cons 9.713217e-01   p_joint 2.472093e-03

Joint ci ratio: 7.179895e-02	ci left: 2.205537e-03	ci right 2.370539e-03	k: 2973	n:1300000
Cons ci ratio: 5.909297e-04	ci left: 9.710177e-01	ci right 9.715925e-01	k: 1262698	n:1300000
KS ci ratio: 1.503964e-01	ci left: 4.830239e-04	ci right 5.623058e-04	k: 678	n:1300000
PCDHB3   1300000 perm   992 sec   (1311 perm/sec)   p_kst 5.215385e-04   p_cons 9.713062e-01   p_joint 2.286923e-03

Joint ci ratio: 6.884607e-02	ci left: 2.383693e-03	ci right 2.554396e-03	k: 3233	n:1310000
Cons ci ratio: 5.886140e-04	ci left: 9.710242e-01	ci right 9.715966e-01	k: 1272418	n:1310000
KS ci ratio: 1.496270e-01	ci left: 4.844797e-04	ci right 5.635573e-04	k: 685	n:1310000
PCDHB3   1310000 perm   1005 sec   (1304 perm/sec)   p_kst 5.229008e-04   p_cons 9.713115e-01   p_joint 2.467939e-03

Joint ci ratio: 6.850778e-02	ci left: 2.389461e-03	ci right 2.559703e-03	k: 3265	n:1320000
Cons ci ratio: 5.864607e-04	ci left: 9.710176e-01	ci right 9.715879e-01	k: 1282121	n:1320000
KS ci ratio: 1.489769e-01	ci left: 4.851851e-04	ci right 5.640031e-04	k: 691	n:1320000
PCDHB3   1320000 perm   1018 sec   (1296 perm/sec)   p_kst 5.234848e-04   p_cons 9.713038e-01   p_joint 2.473485e-03

Joint ci ratio: 6.822629e-02	ci left: 2.391449e-03	ci right 2.561105e-03	k: 3292	n:1330000
Cons ci ratio: 5.841102e-04	ci left: 9.710322e-01	ci right 9.716003e-01	k: 1291852	n:1330000
KS ci ratio: 1.483352e-01	ci left: 4.858805e-04	ci right 5.644414e-04	k: 697	n:1330000
PCDHB3   1330000 perm   1032 sec   (1289 perm/sec)   p_kst 5.240602e-04   p_cons 9.713173e-01   p_joint 2.475188e-03

Joint ci ratio: 6.803045e-02	ci left: 2.387540e-03	ci right 2.556413e-03	k: 3311	n:1340000
Cons ci ratio: 5.819123e-04	ci left: 9.710347e-01	ci right 9.716006e-01	k: 1301567	n:1340000
KS ci ratio: 1.479121e-01	ci left: 4.851290e-04	ci right 5.633248e-04	k: 701	n:1340000
PCDHB3   1340000 perm   1045 sec   (1282 perm/sec)   p_kst 5.231343e-04   p_cons 9.713187e-01   p_joint 2.470896e-03

Joint ci ratio: 6.766343e-02	ci left: 2.396069e-03	ci right 2.564595e-03	k: 3347	n:1350000
Cons ci ratio: 5.798084e-04	ci left: 9.710304e-01	ci right 9.715943e-01	k: 1311273	n:1350000
KS ci ratio: 1.468694e-01	ci left: 4.886698e-04	ci right 5.668323e-04	k: 711	n:1350000
PCDHB3   1350000 perm   1059 sec   (1274 perm/sec)   p_kst 5.266667e-04   p_cons 9.713133e-01   p_joint 2.479259e-03

Joint ci ratio: 6.741220e-02	ci left: 2.396523e-03	ci right 2.564431e-03	k: 3372	n:1360000
Cons ci ratio: 5.775137e-04	ci left: 9.710468e-01	ci right 9.716085e-01	k: 1321007	n:1360000
KS ci ratio: 1.465611e-01	ci left: 4.872015e-04	ci right 5.649512e-04	k: 714	n:1360000
PCDHB3   1360000 perm   1074 sec   (1266 perm/sec)   p_kst 5.250000e-04   p_cons 9.713287e-01   p_joint 2.479412e-03

Joint ci ratio: 6.356966e-02	ci left: 2.679877e-03	ci right 2.856542e-03	k: 3791	n:1370000
Cons ci ratio: 5.753515e-04	ci left: 9.710528e-01	ci right 9.716124e-01	k: 1330727	n:1370000
KS ci ratio: 1.462547e-01	ci left: 4.857548e-04	ci right 5.630975e-04	k: 717	n:1370000
PCDHB3   1370000 perm   1088 sec   (1259 perm/sec)   p_kst 5.233577e-04   p_cons 9.713336e-01   p_joint 2.767153e-03

Joint ci ratio: 6.330302e-02	ci left: 2.683279e-03	ci right 2.859398e-03	k: 3823	n:1380000
Cons ci ratio: 5.731760e-04	ci left: 9.710623e-01	ci right 9.716198e-01	k: 1340452	n:1380000
KS ci ratio: 1.457481e-01	ci left: 4.857257e-04	ci right 5.627725e-04	k: 722	n:1380000
PCDHB3   1380000 perm   1102 sec   (1253 perm/sec)   p_kst 5.231884e-04   p_cons 9.713420e-01   p_joint 2.770290e-03

Joint ci ratio: 6.308894e-02	ci left: 2.682384e-03	ci right 2.857828e-03	k: 3849	n:1390000
Cons ci ratio: 5.710324e-04	ci left: 9.710710e-01	ci right 9.716263e-01	k: 1350176	n:1390000
KS ci ratio: 1.454468e-01	ci left: 4.843109e-04	ci right 5.609607e-04	k: 725	n:1390000
PCDHB3   1390000 perm   1116 sec   (1245 perm/sec)   p_kst 5.215827e-04   p_cons 9.713496e-01   p_joint 2.769065e-03

Joint ci ratio: 6.286077e-02	ci left: 2.682909e-03	ci right 2.857729e-03	k: 3877	n:1400000
Cons ci ratio: 5.687592e-04	ci left: 9.710946e-01	ci right 9.716478e-01	k: 1359921	n:1400000
KS ci ratio: 1.441614e-01	ci left: 4.898009e-04	ci right 5.665756e-04	k: 738	n:1400000
PCDHB3   1400000 perm   1130 sec   (1239 perm/sec)   p_kst 5.271429e-04   p_cons 9.713721e-01   p_joint 2.769286e-03

Joint ci ratio: 6.263505e-02	ci left: 2.683428e-03	ci right 2.857631e-03	k: 3905	n:1410000
Cons ci ratio: 5.668089e-04	ci left: 9.710886e-01	ci right 9.716399e-01	k: 1369625	n:1410000
KS ci ratio: 1.440642e-01	ci left: 4.870107e-04	ci right 5.632922e-04	k: 739	n:1410000
PCDHB3   1410000 perm   1145 sec   (1232 perm/sec)   p_kst 5.241135e-04   p_cons 9.713652e-01   p_joint 2.769504e-03

Joint ci ratio: 6.244358e-02	ci left: 2.681168e-03	ci right 2.854673e-03	k: 3929	n:1420000
Cons ci ratio: 5.649930e-04	ci left: 9.710715e-01	ci right 9.716210e-01	k: 1379313	n:1420000
KS ci ratio: 1.433875e-01	ci left: 4.883334e-04	ci right 5.644320e-04	k: 746	n:1420000
PCDHB3   1420000 perm   1159 sec   (1225 perm/sec)   p_kst 5.253521e-04   p_cons 9.713472e-01   p_joint 2.766901e-03

Joint ci ratio: 6.218294e-02	ci left: 2.685136e-03	ci right 2.858147e-03	k: 3962	n:1430000
Cons ci ratio: 5.629536e-04	ci left: 9.710784e-01	ci right 9.716259e-01	k: 1389035	n:1430000
KS ci ratio: 1.427203e-01	ci left: 4.896384e-04	ci right 5.655551e-04	k: 753	n:1430000
PCDHB3   1430000 perm   1173 sec   (1219 perm/sec)   p_kst 5.265734e-04   p_cons 9.713531e-01   p_joint 2.770629e-03

Joint ci ratio: 6.204241e-02	ci left: 2.678795e-03	ci right 2.850993e-03	k: 3980	n:1440000
Cons ci ratio: 5.609222e-04	ci left: 9.710867e-01	ci right 9.716322e-01	k: 1398759	n:1440000
KS ci ratio: 1.424373e-01	ci left: 4.882472e-04	ci right 5.637853e-04	k: 756	n:1440000
PCDHB3   1440000 perm   1188 sec   (1212 perm/sec)   p_kst 5.250000e-04   p_cons 9.713604e-01   p_joint 2.763889e-03

Joint ci ratio: 6.182536e-02	ci left: 2.679332e-03	ci right 2.850940e-03	k: 4008	n:1450000
Cons ci ratio: 5.588294e-04	ci left: 9.711032e-01	ci right 9.716467e-01	k: 1408495	n:1450000
KS ci ratio: 1.416905e-01	ci left: 4.902011e-04	ci right 5.656103e-04	k: 764	n:1450000
PCDHB3   1450000 perm   1202 sec   (1206 perm/sec)   p_kst 5.268966e-04   p_cons 9.713759e-01   p_joint 2.764138e-03

Joint ci ratio: 6.164887e-02	ci left: 2.676490e-03	ci right 2.847410e-03	k: 4031	n:1460000
Cons ci ratio: 5.568900e-04	ci left: 9.711063e-01	ci right 9.716480e-01	k: 1418212	n:1460000
KS ci ratio: 1.413215e-01	ci left: 4.894863e-04	ci right 5.645729e-04	k: 768	n:1460000
PCDHB3   1460000 perm   1217 sec   (1200 perm/sec)   p_kst 5.260274e-04   p_cons 9.713781e-01   p_joint 2.760959e-03

Joint ci ratio: 6.145109e-02	ci left: 2.675697e-03	ci right 2.845999e-03	k: 4057	n:1470000
Cons ci ratio: 5.550115e-04	ci left: 9.711054e-01	ci right 9.716452e-01	k: 1427923	n:1470000
KS ci ratio: 1.409555e-01	ci left: 4.887814e-04	ci right 5.635494e-04	k: 772	n:1470000
PCDHB3   1470000 perm   1231 sec   (1194 perm/sec)   p_kst 5.251701e-04   p_cons 9.713762e-01   p_joint 2.759864e-03

Joint ci ratio: 6.130038e-02	ci left: 2.670924e-03	ci right 2.840490e-03	k: 4077	n:1480000
Cons ci ratio: 5.531518e-04	ci left: 9.711044e-01	ci right 9.716424e-01	k: 1437634	n:1480000
KS ci ratio: 1.405922e-01	ci left: 4.880864e-04	ci right 5.625395e-04	k: 776	n:1480000
PCDHB3   1480000 perm   1246 sec   (1188 perm/sec)   p_kst 5.243243e-04   p_cons 9.713743e-01   p_joint 2.754730e-03

Joint ci ratio: 6.110592e-02	ci left: 2.670181e-03	ci right 2.839143e-03	k: 4103	n:1490000
Cons ci ratio: 5.511443e-04	ci left: 9.711203e-01	ci right 9.716564e-01	k: 1447370	n:1490000
KS ci ratio: 1.399631e-01	ci left: 4.893437e-04	ci right 5.636268e-04	k: 783	n:1490000
PCDHB3   1490000 perm   1261 sec   (1182 perm/sec)   p_kst 5.255034e-04   p_cons 9.713893e-01   p_joint 2.753691e-03

Joint ci ratio: 6.096514e-02	ci left: 2.664853e-03	ci right 2.833076e-03	k: 4122	n:1500000
Cons ci ratio: 5.493231e-04	ci left: 9.711193e-01	ci right 9.716536e-01	k: 1457081	n:1500000
KS ci ratio: 1.396075e-01	ci left: 4.886548e-04	ci right 5.626292e-04	k: 787	n:1500000
PCDHB3   1500000 perm   1275 sec   (1176 perm/sec)   p_kst 5.246667e-04   p_cons 9.713873e-01   p_joint 2.748000e-03

Joint ci ratio: 6.076651e-02	ci left: 2.664814e-03	ci right 2.832467e-03	k: 4149	n:1510000
Cons ci ratio: 5.475981e-04	ci left: 9.711103e-01	ci right 9.716429e-01	k: 1466780	n:1510000
KS ci ratio: 1.391667e-01	ci left: 4.886145e-04	ci right 5.623298e-04	k: 792	n:1510000
PCDHB3   1510000 perm   1290 sec   (1170 perm/sec)   p_kst 5.245033e-04   p_cons 9.713775e-01   p_joint 2.747682e-03

Joint ci ratio: 6.058435e-02	ci left: 2.663480e-03	ci right 2.830529e-03	k: 4174	n:1520000
Cons ci ratio: 5.457019e-04	ci left: 9.711206e-01	ci right 9.716513e-01	k: 1476508	n:1520000
KS ci ratio: 1.386431e-01	ci left: 4.892101e-04	ci right 5.627147e-04	k: 798	n:1520000
PCDHB3   1520000 perm   1306 sec   (1164 perm/sec)   p_kst 5.250000e-04   p_cons 9.713868e-01   p_joint 2.746053e-03

Joint ci ratio: 6.036779e-02	ci left: 2.665383e-03	ci right 2.831933e-03	k: 4204	n:1530000
Cons ci ratio: 5.438892e-04	ci left: 9.711242e-01	ci right 9.716531e-01	k: 1486226	n:1530000
KS ci ratio: 1.381254e-01	ci left: 4.897985e-04	ci right 5.630941e-04	k: 804	n:1530000
PCDHB3   1530000 perm   1321 sec   (1158 perm/sec)   p_kst 5.254902e-04   p_cons 9.713895e-01   p_joint 2.747712e-03

Joint ci ratio: 6.018205e-02	ci left: 2.664704e-03	ci right 2.830681e-03	k: 4230	n:1540000
Cons ci ratio: 5.422654e-04	ci left: 9.711101e-01	ci right 9.716375e-01	k: 1495917	n:1540000
KS ci ratio: 1.376985e-01	ci left: 4.897527e-04	ci right 5.627963e-04	k: 809	n:1540000
PCDHB3   1540000 perm   1336 sec   (1153 perm/sec)   p_kst 5.253247e-04   p_cons 9.713747e-01   p_joint 2.746753e-03

Joint ci ratio: 5.996977e-02	ci left: 2.666577e-03	ci right 2.832064e-03	k: 4260	n:1550000
Cons ci ratio: 5.403737e-04	ci left: 9.711254e-01	ci right 9.716509e-01	k: 1505653	n:1550000
KS ci ratio: 1.372755e-01	ci left: 4.897079e-04	ci right 5.625021e-04	k: 814	n:1550000
PCDHB3   1550000 perm   1351 sec   (1147 perm/sec)   p_kst 5.251613e-04   p_cons 9.713890e-01   p_joint 2.748387e-03

Joint ci ratio: 5.973878e-02	ci left: 2.670320e-03	ci right 2.835380e-03	k: 4293	n:1560000
Cons ci ratio: 5.386383e-04	ci left: 9.711263e-01	ci right 9.716502e-01	k: 1515367	n:1560000
KS ci ratio: 1.368563e-01	ci left: 4.896639e-04	ci right 5.622113e-04	k: 819	n:1560000
PCDHB3   1560000 perm   1367 sec   (1141 perm/sec)   p_kst 5.250000e-04   p_cons 9.713891e-01   p_joint 2.751923e-03

Joint ci ratio: 5.954495e-02	ci left: 2.670881e-03	ci right 2.835421e-03	k: 4321	n:1570000
Cons ci ratio: 5.368886e-04	ci left: 9.711304e-01	ci right 9.716526e-01	k: 1525086	n:1570000
KS ci ratio: 1.362758e-01	ci left: 4.908513e-04	ci right 5.632411e-04	k: 826	n:1570000
PCDHB3   1570000 perm   1382 sec   (1136 perm/sec)   p_kst 5.261146e-04   p_cons 9.713924e-01   p_joint 2.752229e-03

Joint ci ratio: 5.931199e-02	ci left: 2.675176e-03	ci right 2.839314e-03	k: 4355	n:1580000
Cons ci ratio: 5.352778e-04	ci left: 9.711218e-01	ci right 9.716423e-01	k: 1534785	n:1580000
KS ci ratio: 1.357026e-01	ci left: 4.920244e-04	ci right 5.642573e-04	k: 833	n:1580000
PCDHB3   1580000 perm   1398 sec   (1130 perm/sec)   p_kst 5.272152e-04   p_cons 9.713829e-01   p_joint 2.756329e-03

Joint ci ratio: 5.912903e-02	ci left: 2.675080e-03	ci right 2.838689e-03	k: 4382	n:1590000
Cons ci ratio: 5.335365e-04	ci left: 9.711284e-01	ci right 9.716473e-01	k: 1544508	n:1590000
KS ci ratio: 1.351366e-01	ci left: 4.931833e-04	ci right 5.652601e-04	k: 840	n:1590000
PCDHB3   1590000 perm   1414 sec   (1124 perm/sec)   p_kst 5.283019e-04   p_cons 9.713887e-01   p_joint 2.755975e-03

Joint ci ratio: 5.888753e-02	ci left: 2.680529e-03	ci right 2.843779e-03	k: 4418	n:1600000
Cons ci ratio: 5.319317e-04	ci left: 9.711224e-01	ci right 9.716397e-01	k: 1554211	n:1600000
KS ci ratio: 1.346571e-01	ci left: 4.937243e-04	ci right 5.656036e-04	k: 846	n:1600000
PCDHB3   1600000 perm   1430 sec   (1119 perm/sec)   p_kst 5.287500e-04   p_cons 9.713819e-01   p_joint 2.761250e-03

Joint ci ratio: 5.865557e-02	ci left: 2.685300e-03	ci right 2.848174e-03	k: 4453	n:1610000
Cons ci ratio: 5.303057e-04	ci left: 9.711202e-01	ci right 9.716359e-01	k: 1563920	n:1610000
KS ci ratio: 1.342614e-01	ci left: 4.936588e-04	ci right 5.653006e-04	k: 851	n:1610000
PCDHB3   1610000 perm   1445 sec   (1114 perm/sec)   p_kst 5.285714e-04   p_cons 9.713789e-01   p_joint 2.765839e-03

Joint ci ratio: 5.846552e-02	ci left: 2.686363e-03	ci right 2.848756e-03	k: 4482	n:1620000
Cons ci ratio: 5.285301e-04	ci left: 9.711354e-01	ci right 9.716494e-01	k: 1573657	n:1620000
KS ci ratio: 1.337132e-01	ci left: 4.947877e-04	ci right 5.662768e-04	k: 858	n:1620000
PCDHB3   1620000 perm   1461 sec   (1108 perm/sec)   p_kst 5.296296e-04   p_cons 9.713932e-01   p_joint 2.766667e-03

Joint ci ratio: 5.827083e-02	ci left: 2.688019e-03	ci right 2.849952e-03	k: 4512	n:1630000
Cons ci ratio: 5.270223e-04	ci left: 9.711239e-01	ci right 9.716364e-01	k: 1583351	n:1630000
KS ci ratio: 1.332486e-01	ci left: 4.953103e-04	ci right 5.666065e-04	k: 864	n:1630000
PCDHB3   1630000 perm   1477 sec   (1103 perm/sec)   p_kst 5.300613e-04   p_cons 9.713810e-01   p_joint 2.768098e-03

Joint ci ratio: 5.803965e-02	ci left: 2.693261e-03	ci right 2.854845e-03	k: 4548	n:1640000
Cons ci ratio: 5.253946e-04	ci left: 9.711266e-01	ci right 9.716376e-01	k: 1593068	n:1640000
KS ci ratio: 1.327126e-01	ci left: 4.964164e-04	ci right 5.675618e-04	k: 871	n:1640000
PCDHB3   1640000 perm   1493 sec   (1098 perm/sec)   p_kst 5.310976e-04   p_cons 9.713829e-01   p_joint 2.773171e-03

Joint ci ratio: 5.786819e-02	ci left: 2.693064e-03	ci right 2.854143e-03	k: 4575	n:1650000
Cons ci ratio: 5.237534e-04	ci left: 9.711324e-01	ci right 9.716417e-01	k: 1602790	n:1650000
KS ci ratio: 1.324093e-01	ci left: 4.957517e-04	ci right 5.666266e-04	k: 875	n:1650000
PCDHB3   1650000 perm   1510 sec   (1093 perm/sec)   p_kst 5.303030e-04   p_cons 9.713879e-01   p_joint 2.772727e-03

Joint ci ratio: 5.774227e-02	ci left: 2.688715e-03	ci right 2.849172e-03	k: 4595	n:1660000
Cons ci ratio: 5.223029e-04	ci left: 9.711193e-01	ci right 9.716272e-01	k: 1612481	n:1660000
KS ci ratio: 1.320331e-01	ci left: 4.956776e-04	ci right 5.663248e-04	k: 880	n:1660000
PCDHB3   1660000 perm   1526 sec   (1088 perm/sec)   p_kst 5.301205e-04   p_cons 9.713741e-01   p_joint 2.768072e-03

Joint ci ratio: 5.753599e-02	ci left: 2.692091e-03	ci right 2.852156e-03	k: 4628	n:1670000
Cons ci ratio: 5.209203e-04	ci left: 9.711004e-01	ci right 9.716070e-01	k: 1622162	n:1670000
KS ci ratio: 1.313636e-01	ci left: 4.979212e-04	ci right 5.685003e-04	k: 889	n:1670000
PCDHB3   1670000 perm   1542 sec   (1083 perm/sec)   p_kst 5.323353e-04   p_cons 9.713545e-01   p_joint 2.771257e-03

Joint ci ratio: 5.736894e-02	ci left: 2.691907e-03	ci right 2.851482e-03	k: 4655	n:1680000
Cons ci ratio: 5.193761e-04	ci left: 9.711002e-01	ci right 9.716053e-01	k: 1631874	n:1680000
KS ci ratio: 1.311429e-01	ci left: 4.966845e-04	ci right 5.669607e-04	k: 892	n:1680000
PCDHB3   1680000 perm   1559 sec   (1078 perm/sec)   p_kst 5.309524e-04   p_cons 9.713536e-01   p_joint 2.770833e-03

Joint ci ratio: 5.719108e-02	ci left: 2.692892e-03	ci right 2.852014e-03	k: 4684	n:1690000
Cons ci ratio: 5.180438e-04	ci left: 9.710787e-01	ci right 9.715824e-01	k: 1641550	n:1690000
KS ci ratio: 1.307773e-01	ci left: 4.966071e-04	ci right 5.666614e-04	k: 897	n:1690000
PCDHB3   1690000 perm   1575 sec   (1073 perm/sec)   p_kst 5.307692e-04   p_cons 9.713314e-01   p_joint 2.771598e-03

Joint ci ratio: 5.702094e-02	ci left: 2.693287e-03	ci right 2.851943e-03	k: 4712	n:1700000
Cons ci ratio: 5.166123e-04	ci left: 9.710692e-01	ci right 9.715716e-01	k: 1651246	n:1700000
KS ci ratio: 1.303426e-01	ci left: 4.971001e-04	ci right 5.669727e-04	k: 903	n:1700000
PCDHB3   1700000 perm   1592 sec   (1068 perm/sec)   p_kst 5.311765e-04   p_cons 9.713212e-01   p_joint 2.771765e-03

Joint ci ratio: 5.689444e-02	ci left: 2.689643e-03	ci right 2.847721e-03	k: 4733	n:1710000
Cons ci ratio: 5.149763e-04	ci left: 9.710833e-01	ci right 9.715841e-01	k: 1660982	n:1710000
KS ci ratio: 1.300552e-01	ci left: 4.964560e-04	ci right 5.660724e-04	k: 907	n:1710000
PCDHB3   1710000 perm   1609 sec   (1063 perm/sec)   p_kst 5.304094e-04   p_cons 9.713345e-01   p_joint 2.767836e-03

Joint ci ratio: 5.680473e-02	ci left: 2.682602e-03	ci right 2.840010e-03	k: 4748	n:1720000
Cons ci ratio: 5.134843e-04	ci left: 9.710833e-01	ci right 9.715826e-01	k: 1670694	n:1720000
KS ci ratio: 1.297697e-01	ci left: 4.958197e-04	ci right 5.651824e-04	k: 911	n:1720000
PCDHB3   1720000 perm   1626 sec   (1058 perm/sec)   p_kst 5.296512e-04   p_cons 9.713337e-01   p_joint 2.760465e-03

Joint ci ratio: 5.665584e-02	ci left: 2.681342e-03	ci right 2.838249e-03	k: 4773	n:1730000
Cons ci ratio: 5.121221e-04	ci left: 9.710704e-01	ci right 9.715684e-01	k: 1680384	n:1730000
KS ci ratio: 1.294155e-01	ci left: 4.957501e-04	ci right 5.648993e-04	k: 916	n:1730000
PCDHB3   1730000 perm   1643 sec   (1053 perm/sec)   p_kst 5.294798e-04   p_cons 9.713202e-01   p_joint 2.758960e-03

Joint ci ratio: 5.654357e-02	ci left: 2.676696e-03	ci right 2.833012e-03	k: 4792	n:1740000
Cons ci ratio: 5.106862e-04	ci left: 9.710670e-01	ci right 9.715636e-01	k: 1690090	n:1740000
KS ci ratio: 1.291342e-01	ci left: 4.951255e-04	ci right 5.640259e-04	k: 920	n:1740000
PCDHB3   1740000 perm   1660 sec   (1048 perm/sec)   p_kst 5.287356e-04   p_cons 9.713161e-01   p_joint 2.754023e-03

Joint ci ratio: 5.639086e-02	ci left: 2.676048e-03	ci right 2.831890e-03	k: 4818	n:1750000
Cons ci ratio: 5.093460e-04	ci left: 9.710544e-01	ci right 9.715497e-01	k: 1699780	n:1750000
KS ci ratio: 1.284386e-01	ci left: 4.978264e-04	ci right 5.667011e-04	k: 930	n:1750000
PCDHB3   1750000 perm   1677 sec   (1044 perm/sec)   p_kst 5.314286e-04   p_cons 9.713029e-01   p_joint 2.753143e-03

Joint ci ratio: 5.625101e-02	ci left: 2.674288e-03	ci right 2.829628e-03	k: 4842	n:1760000
Cons ci ratio: 5.078763e-04	ci left: 9.710574e-01	ci right 9.715513e-01	k: 1709497	n:1760000
KS ci ratio: 1.283010e-01	ci left: 4.960977e-04	ci right 5.646541e-04	k: 932	n:1760000
PCDHB3   1760000 perm   1694 sec   (1039 perm/sec)   p_kst 5.295455e-04   p_cons 9.713051e-01   p_joint 2.751136e-03

Joint ci ratio: 5.608333e-02	ci left: 2.675333e-03	ci right 2.830256e-03	k: 4871	n:1770000
Cons ci ratio: 5.064450e-04	ci left: 9.710575e-01	ci right 9.715500e-01	k: 1719209	n:1770000
KS ci ratio: 1.281638e-01	ci left: 4.943886e-04	ci right 5.626302e-04	k: 934	n:1770000
PCDHB3   1770000 perm   1711 sec   (1035 perm/sec)   p_kst 5.276836e-04   p_cons 9.713045e-01   p_joint 2.751977e-03

Joint ci ratio: 5.591141e-02	ci left: 2.676921e-03	ci right 2.831446e-03	k: 4901	n:1780000
Cons ci ratio: 5.049544e-04	ci left: 9.710655e-01	ci right 9.715565e-01	k: 1728935	n:1780000
KS ci ratio: 1.278225e-01	ci left: 4.943302e-04	ci right 5.623682e-04	k: 939	n:1780000
PCDHB3   1780000 perm   1728 sec   (1030 perm/sec)   p_kst 5.275281e-04   p_cons 9.713118e-01   p_joint 2.753371e-03

Joint ci ratio: 5.568449e-02	ci left: 2.684001e-03	ci right 2.838285e-03	k: 4941	n:1790000
Cons ci ratio: 5.035274e-04	ci left: 9.710678e-01	ci right 9.715575e-01	k: 1738651	n:1790000
KS ci ratio: 1.275515e-01	ci left: 4.937318e-04	ci right 5.615325e-04	k: 943	n:1790000
PCDHB3   1790000 perm   1746 sec   (1025 perm/sec)   p_kst 5.268156e-04   p_cons 9.713134e-01   p_joint 2.760335e-03

Joint ci ratio: 5.554982e-02	ci left: 2.682238e-03	ci right 2.836036e-03	k: 4965	n:1800000
Cons ci ratio: 5.021174e-04	ci left: 9.710696e-01	ci right 9.715578e-01	k: 1748366	n:1800000
KS ci ratio: 1.273493e-01	ci left: 4.926023e-04	ci right 5.601326e-04	k: 946	n:1800000
PCDHB3   1800000 perm   1763 sec   (1021 perm/sec)   p_kst 5.255556e-04   p_cons 9.713144e-01   p_joint 2.758333e-03

Joint ci ratio: 5.543842e-02	ci left: 2.678315e-03	ci right 2.831570e-03	k: 4985	n:1810000
Cons ci ratio: 5.008730e-04	ci left: 9.710541e-01	ci right 9.715411e-01	k: 1758050	n:1810000
KS ci ratio: 1.269478e-01	ci left: 4.930903e-04	ci right 5.604583e-04	k: 952	n:1810000
PCDHB3   1810000 perm   1781 sec   (1016 perm/sec)   p_kst 5.259669e-04   p_cons 9.712983e-01   p_joint 2.754144e-03

Joint ci ratio: 5.532214e-02	ci left: 2.674977e-03	ci right 2.827710e-03	k: 5006	n:1820000
Cons ci ratio: 4.994901e-04	ci left: 9.710553e-01	ci right 9.715410e-01	k: 1767764	n:1820000
KS ci ratio: 1.268814e-01	ci left: 4.909129e-04	ci right 5.579458e-04	k: 953	n:1820000
PCDHB3   1820000 perm   1798 sec   (1012 perm/sec)   p_kst 5.236264e-04   p_cons 9.712989e-01   p_joint 2.750549e-03

Joint ci ratio: 5.519008e-02	ci left: 2.673294e-03	ci right 2.825555e-03	k: 5030	n:1830000
Cons ci ratio: 4.981820e-04	ci left: 9.710494e-01	ci right 9.715338e-01	k: 1777465	n:1830000
KS ci ratio: 1.265502e-01	ci left: 4.908760e-04	ci right 5.577157e-04	k: 958	n:1830000
PCDHB3   1830000 perm   1816 sec   (1008 perm/sec)   p_kst 5.234973e-04   p_cons 9.712923e-01   p_joint 2.748634e-03

Joint ci ratio: 5.508081e-02	ci left: 2.669484e-03	ci right 2.821218e-03	k: 5050	n:1840000
Cons ci ratio: 4.970341e-04	ci left: 9.710266e-01	ci right 9.715099e-01	k: 1787135	n:1840000
KS ci ratio: 1.262216e-01	ci left: 4.908397e-04	ci right 5.574879e-04	k: 963	n:1840000
PCDHB3   1840000 perm   1834 sec   (1003 perm/sec)   p_kst 5.233696e-04   p_cons 9.712690e-01   p_joint 2.744565e-03

Joint ci ratio: 5.499395e-02	ci left: 2.663584e-03	ci right 2.814736e-03	k: 5066	n:1850000
Cons ci ratio: 4.957163e-04	ci left: 9.710242e-01	ci right 9.715062e-01	k: 1796842	n:1850000
KS ci ratio: 1.260257e-01	ci left: 4.897569e-04	ci right 5.561472e-04	k: 966	n:1850000
PCDHB3   1850000 perm   1852 sec   (999 perm/sec)   p_kst 5.221622e-04   p_cons 9.712659e-01   p_joint 2.738378e-03

Joint ci ratio: 5.482105e-02	ci left: 2.666232e-03	ci right 2.817043e-03	k: 5098	n:1860000
Cons ci ratio: 4.942850e-04	ci left: 9.710358e-01	ci right 9.715165e-01	k: 1806575	n:1860000
KS ci ratio: 1.255075e-01	ci left: 4.912896e-04	ci right 5.575935e-04	k: 974	n:1860000
PCDHB3   1860000 perm   1870 sec   (995 perm/sec)   p_kst 5.236559e-04   p_cons 9.712769e-01   p_joint 2.740860e-03

Joint ci ratio: 5.466045e-02	ci left: 2.667797e-03	ci right 2.818241e-03	k: 5128	n:1870000
Cons ci ratio: 4.930078e-04	ci left: 9.710312e-01	ci right 9.715106e-01	k: 1816278	n:1870000
KS ci ratio: 1.250593e-01	ci left: 4.922884e-04	ci right 5.584722e-04	k: 981	n:1870000
PCDHB3   1870000 perm   1888 sec   (991 perm/sec)   p_kst 5.245989e-04   p_cons 9.712717e-01   p_joint 2.742246e-03

Joint ci ratio: 5.446950e-02	ci left: 2.672495e-03	ci right 2.822660e-03	k: 5164	n:1880000
Cons ci ratio: 4.916372e-04	ci left: 9.710384e-01	ci right 9.715165e-01	k: 1826003	n:1880000
KS ci ratio: 1.246159e-01	ci left: 4.932770e-04	ci right 5.593412e-04	k: 988	n:1880000
PCDHB3   1880000 perm   1906 sec   (986 perm/sec)   p_kst 5.255319e-04   p_cons 9.712782e-01   p_joint 2.746809e-03

Joint ci ratio: 5.428054e-02	ci left: 2.677144e-03	ci right 2.827032e-03	k: 5200	n:1890000
Cons ci ratio: 4.903246e-04	ci left: 9.710403e-01	ci right 9.715170e-01	k: 1835718	n:1890000
KS ci ratio: 1.236812e-01	ci left: 4.983572e-04	ci right 5.645645e-04	k: 1003	n:1890000
PCDHB3   1890000 perm   1924 sec   (982 perm/sec)   p_kst 5.306878e-04   p_cons 9.712794e-01   p_joint 2.751323e-03

Joint ci ratio: 5.411944e-02	ci left: 2.679148e-03	ci right 2.828690e-03	k: 5231	n:1900000
Cons ci ratio: 4.889670e-04	ci left: 9.710484e-01	ci right 9.715238e-01	k: 1845445	n:1900000
KS ci ratio: 1.232522e-01	ci left: 4.993047e-04	ci right 5.653910e-04	k: 1010	n:1900000
PCDHB3   1900000 perm   1942 sec   (978 perm/sec)   p_kst 5.315789e-04   p_cons 9.712868e-01   p_joint 2.753158e-03

Joint ci ratio: 5.395977e-02	ci left: 2.681132e-03	ci right 2.830329e-03	k: 5262	n:1910000
Cons ci ratio: 4.877716e-04	ci left: 9.710391e-01	ci right 9.715134e-01	k: 1855139	n:1910000
KS ci ratio: 1.229486e-01	ci left: 4.992277e-04	ci right 5.651292e-04	k: 1015	n:1910000
PCDHB3   1910000 perm   1961 sec   (974 perm/sec)   p_kst 5.314136e-04   p_cons 9.712770e-01   p_joint 2.754974e-03

Joint ci ratio: 5.381680e-02	ci left: 2.681555e-03	ci right 2.830368e-03	k: 5290	n:1920000
Cons ci ratio: 4.865123e-04	ci left: 9.710383e-01	ci right 9.715113e-01	k: 1864849	n:1920000
KS ci ratio: 1.227073e-01	ci left: 4.986469e-04	ci right 5.643332e-04	k: 1019	n:1920000
PCDHB3   1920000 perm   1980 sec   (970 perm/sec)   p_kst 5.307292e-04   p_cons 9.712755e-01   p_joint 2.755208e-03

Joint ci ratio: 5.369014e-02	ci left: 2.680440e-03	ci right 2.828830e-03	k: 5315	n:1930000
Cons ci ratio: 4.852807e-04	ci left: 9.710354e-01	ci right 9.715072e-01	k: 1874555	n:1930000
KS ci ratio: 1.224675e-01	ci left: 4.980722e-04	ci right 5.635453e-04	k: 1023	n:1930000
PCDHB3   1930000 perm   1998 sec   (966 perm/sec)   p_kst 5.300518e-04   p_cons 9.712720e-01   p_joint 2.753886e-03

Joint ci ratio: 5.352921e-02	ci left: 2.682897e-03	ci right 2.830965e-03	k: 5347	n:1940000
Cons ci ratio: 4.842550e-04	ci left: 9.710098e-01	ci right 9.714806e-01	k: 1884217	n:1940000
KS ci ratio: 1.222885e-01	ci left: 4.970039e-04	ci right 5.622341e-04	k: 1026	n:1940000
PCDHB3   1940000 perm   2017 sec   (962 perm/sec)   p_kst 5.288660e-04   p_cons 9.712459e-01   p_joint 2.756186e-03

Joint ci ratio: 5.341454e-02	ci left: 2.680776e-03	ci right 2.828399e-03	k: 5370	n:1950000
Cons ci ratio: 4.831024e-04	ci left: 9.709998e-01	ci right 9.714695e-01	k: 1893909	n:1950000
KS ci ratio: 1.219329e-01	ci left: 4.974381e-04	ci right 5.625217e-04	k: 1032	n:1950000
PCDHB3   1950000 perm   2035 sec   (958 perm/sec)   p_kst 5.292308e-04   p_cons 9.712354e-01   p_joint 2.753846e-03

Joint ci ratio: 5.329069e-02	ci left: 2.679683e-03	ci right 2.826894e-03	k: 5395	n:1960000
Cons ci ratio: 4.819448e-04	ci left: 9.709915e-01	ci right 9.714601e-01	k: 1903604	n:1960000
KS ci ratio: 1.215803e-01	ci left: 4.978681e-04	ci right 5.628061e-04	k: 1038	n:1960000
PCDHB3   1960000 perm   2054 sec   (954 perm/sec)   p_kst 5.295918e-04   p_cons 9.712265e-01   p_joint 2.752551e-03

Joint ci ratio: 5.316279e-02	ci left: 2.679103e-03	ci right 2.825918e-03	k: 5421	n:1970000
Cons ci ratio: 4.807604e-04	ci left: 9.709874e-01	ci right 9.714548e-01	k: 1913307	n:1970000
KS ci ratio: 1.215219e-01	ci left: 4.958330e-04	ci right 5.604723e-04	k: 1039	n:1970000
PCDHB3   1970000 perm   2073 sec   (950 perm/sec)   p_kst 5.274112e-04   p_cons 9.712218e-01   p_joint 2.751777e-03

Joint ci ratio: 5.305533e-02	ci left: 2.676536e-03	ci right 2.822904e-03	k: 5443	n:1980000
Cons ci ratio: 4.795458e-04	ci left: 9.709879e-01	ci right 9.714541e-01	k: 1923019	n:1980000
KS ci ratio: 1.211729e-01	ci left: 4.962671e-04	ci right 5.607639e-04	k: 1045	n:1980000
PCDHB3   1980000 perm   2092 sec   (946 perm/sec)   p_kst 5.277778e-04   p_cons 9.712217e-01   p_joint 2.748990e-03

Joint ci ratio: 5.289034e-02	ci left: 2.679945e-03	ci right 2.826031e-03	k: 5477	n:1990000
Cons ci ratio: 4.784736e-04	ci left: 9.709727e-01	ci right 9.714379e-01	k: 1932700	n:1990000
KS ci ratio: 1.205976e-01	ci left: 4.986466e-04	ci right 5.631229e-04	k: 1055	n:1990000
PCDHB3   1990000 perm   2111 sec   (943 perm/sec)   p_kst 5.301508e-04   p_cons 9.712060e-01   p_joint 2.752261e-03

Joint ci ratio: 5.279415e-02	ci left: 2.676413e-03	ci right 2.822033e-03	k: 5497	n:2000000
Cons ci ratio: 4.772847e-04	ci left: 9.709723e-01	ci right 9.714363e-01	k: 1942410	n:2000000
KS ci ratio: 1.204268e-01	ci left: 4.976081e-04	ci right 5.618525e-04	k: 1058	n:2000000
PCDHB3   2000000 perm   2130 sec   (939 perm/sec)   p_kst 5.290000e-04   p_cons 9.712050e-01   p_joint 2.748500e-03

Joint ci ratio: 5.267456e-02	ci left: 2.675371e-03	ci right 2.820594e-03	k: 5522	n:2010000
Cons ci ratio: 4.760876e-04	ci left: 9.709739e-01	ci right 9.714367e-01	k: 1952124	n:2010000
KS ci ratio: 1.202000e-01	ci left: 4.970626e-04	ci right 5.611072e-04	k: 1062	n:2010000
PCDHB3   2010000 perm   2150 sec   (935 perm/sec)   p_kst 5.283582e-04   p_cons 9.712060e-01   p_joint 2.747264e-03

Joint ci ratio: 5.254154e-02	ci left: 2.675806e-03	ci right 2.820675e-03	k: 5550	n:2020000
Cons ci ratio: 4.749878e-04	ci left: 9.709650e-01	ci right 9.714268e-01	k: 1961817	n:2020000
KS ci ratio: 1.200872e-01	ci left: 4.955622e-04	ci right 5.593493e-04	k: 1064	n:2020000
PCDHB3   2020000 perm   2169 sec   (931 perm/sec)   p_kst 5.267327e-04   p_cons 9.711965e-01   p_joint 2.747525e-03

Joint ci ratio: 5.240952e-02	ci left: 2.676237e-03	ci right 2.820754e-03	k: 5578	n:2030000
Cons ci ratio: 4.737913e-04	ci left: 9.709685e-01	ci right 9.714291e-01	k: 1971535	n:2030000
KS ci ratio: 1.195829e-01	ci left: 4.974216e-04	ci right 5.611601e-04	k: 1073	n:2030000
PCDHB3   2030000 perm   2188 sec   (928 perm/sec)   p_kst 5.285714e-04   p_cons 9.711995e-01   p_joint 2.747783e-03

Joint ci ratio: 5.230188e-02	ci left: 2.674245e-03	ci right 2.818349e-03	k: 5601	n:2040000
Cons ci ratio: 4.726203e-04	ci left: 9.709701e-01	ci right 9.714296e-01	k: 1981249	n:2040000
KS ci ratio: 1.193055e-01	ci left: 4.973610e-04	ci right 5.609335e-04	k: 1078	n:2040000
PCDHB3   2040000 perm   2207 sec   (924 perm/sec)   p_kst 5.284314e-04   p_cons 9.712005e-01   p_joint 2.745588e-03

Joint ci ratio: 5.218095e-02	ci left: 2.673717e-03	ci right 2.817449e-03	k: 5627	n:2050000
Cons ci ratio: 4.714785e-04	ci left: 9.709692e-01	ci right 9.714275e-01	k: 1990958	n:2050000
KS ci ratio: 1.190300e-01	ci left: 4.973012e-04	ci right 5.607090e-04	k: 1083	n:2050000
PCDHB3   2050000 perm   2227 sec   (921 perm/sec)   p_kst 5.282927e-04   p_cons 9.711990e-01   p_joint 2.744878e-03

Joint ci ratio: 5.203317e-02	ci left: 2.676070e-03	ci right 2.819509e-03	k: 5659	n:2060000
Cons ci ratio: 4.704102e-04	ci left: 9.709605e-01	ci right 9.714178e-01	k: 2000651	n:2060000
KS ci ratio: 1.188657e-01	ci left: 4.963001e-04	ci right 5.594867e-04	k: 1086	n:2060000
PCDHB3   2060000 perm   2247 sec   (917 perm/sec)   p_kst 5.271845e-04   p_cons 9.711898e-01   p_joint 2.747087e-03

Joint ci ratio: 5.193241e-02	ci left: 2.673632e-03	ci right 2.816654e-03	k: 5681	n:2070000
Cons ci ratio: 4.691384e-04	ci left: 9.709771e-01	ci right 9.714332e-01	k: 2010396	n:2070000
KS ci ratio: 1.187021e-01	ci left: 4.953087e-04	ci right 5.582762e-04	k: 1089	n:2070000
PCDHB3   2070000 perm   2267 sec   (913 perm/sec)   p_kst 5.260870e-04   p_cons 9.712058e-01   p_joint 2.744444e-03

Joint ci ratio: 5.180492e-02	ci left: 2.674064e-03	ci right 2.816749e-03	k: 5709	n:2080000
Cons ci ratio: 4.679170e-04	ci left: 9.709887e-01	ci right 9.714436e-01	k: 2020131	n:2080000
KS ci ratio: 1.184308e-01	ci left: 4.952600e-04	ci right 5.580673e-04	k: 1094	n:2080000
PCDHB3   2080000 perm   2286 sec   (910 perm/sec)   p_kst 5.259615e-04   p_cons 9.712168e-01   p_joint 2.744712e-03

Joint ci ratio: 5.169191e-02	ci left: 2.673077e-03	ci right 2.815388e-03	k: 5734	n:2090000
Cons ci ratio: 4.668089e-04	ci left: 9.709877e-01	ci right 9.714416e-01	k: 2029840	n:2090000
KS ci ratio: 1.182151e-01	ci left: 4.947475e-04	ci right 5.573676e-04	k: 1098	n:2090000
PCDHB3   2090000 perm   2306 sec   (906 perm/sec)   p_kst 5.253589e-04   p_cons 9.712153e-01   p_joint 2.743541e-03

Joint ci ratio: 5.157964e-02	ci left: 2.672099e-03	ci right 2.814040e-03	k: 5759	n:2100000
Cons ci ratio: 4.656769e-04	ci left: 9.709906e-01	ci right 9.714433e-01	k: 2039557	n:2100000
KS ci ratio: 1.179471e-01	ci left: 4.947022e-04	ci right 5.571647e-04	k: 1103	n:2100000
PCDHB3   2100000 perm   2326 sec   (903 perm/sec)   p_kst 5.252381e-04   p_cons 9.712176e-01   p_joint 2.742381e-03

Joint ci ratio: 5.142355e-02	ci left: 2.675809e-03	ci right 2.817504e-03	k: 5794	n:2110000
Cons ci ratio: 4.646279e-04	ci left: 9.709844e-01	ci right 9.714361e-01	k: 2049255	n:2110000
KS ci ratio: 1.175749e-01	ci left: 4.955775e-04	ci right 5.579394e-04	k: 1110	n:2110000
PCDHB3   2110000 perm   2347 sec   (899 perm/sec)   p_kst 5.260664e-04   p_cons 9.712109e-01   p_joint 2.745972e-03

Joint ci ratio: 5.130418e-02	ci left: 2.675760e-03	ci right 2.817113e-03	k: 5821	n:2120000
Cons ci ratio: 4.634999e-04	ci left: 9.709887e-01	ci right 9.714393e-01	k: 2058975	n:2120000
KS ci ratio: 1.173112e-01	ci left: 4.955291e-04	ci right 5.577353e-04	k: 1115	n:2120000
PCDHB3   2120000 perm   2367 sec   (896 perm/sec)   p_kst 5.259434e-04   p_cons 9.712146e-01   p_joint 2.745755e-03

Joint ci ratio: 5.119002e-02	ci left: 2.675248e-03	ci right 2.816251e-03	k: 5847	n:2130000
Cons ci ratio: 4.625392e-04	ci left: 9.709736e-01	ci right 9.714233e-01	k: 2068654	n:2130000
KS ci ratio: 1.169971e-01	ci left: 4.959370e-04	ci right 5.580162e-04	k: 1121	n:2130000
PCDHB3   2130000 perm   2387 sec   (892 perm/sec)   p_kst 5.262911e-04   p_cons 9.711991e-01   p_joint 2.745070e-03

Joint ci ratio: 5.102438e-02	ci left: 2.680277e-03	ci right 2.821074e-03	k: 5885	n:2140000
Cons ci ratio: 4.613994e-04	ci left: 9.709812e-01	ci right 9.714297e-01	k: 2078381	n:2140000
KS ci ratio: 1.165821e-01	ci left: 4.972487e-04	ci right 5.592561e-04	k: 1129	n:2140000
PCDHB3   2140000 perm   2407 sec   (889 perm/sec)   p_kst 5.275701e-04   p_cons 9.712061e-01   p_joint 2.750000e-03

Joint ci ratio: 5.089913e-02	ci left: 2.681127e-03	ci right 2.821613e-03	k: 5914	n:2150000
Cons ci ratio: 4.603445e-04	ci left: 9.709793e-01	ci right 9.714269e-01	k: 2088088	n:2150000
KS ci ratio: 1.162738e-01	ci left: 4.976453e-04	ci right 5.595269e-04	k: 1135	n:2150000
PCDHB3   2150000 perm   2428 sec   (886 perm/sec)   p_kst 5.279070e-04   p_cons 9.712037e-01   p_joint 2.750698e-03

Joint ci ratio: 5.079622e-02	ci left: 2.679684e-03	ci right 2.819803e-03	k: 5938	n:2160000
Cons ci ratio: 4.592892e-04	ci left: 9.709784e-01	ci right 9.714249e-01	k: 2097797	n:2160000
KS ci ratio: 1.160188e-01	ci left: 4.975890e-04	ci right 5.593185e-04	k: 1140	n:2160000
PCDHB3   2160000 perm   2448 sec   (882 perm/sec)   p_kst 5.277778e-04   p_cons 9.712023e-01   p_joint 2.749074e-03

Joint ci ratio: 5.066413e-02	ci left: 2.681440e-03	ci right 2.821275e-03	k: 5969	n:2170000
Cons ci ratio: 4.583166e-04	ci left: 9.709683e-01	ci right 9.714139e-01	k: 2107486	n:2170000
KS ci ratio: 1.157149e-01	ci left: 4.979808e-04	ci right 5.595861e-04	k: 1146	n:2170000
PCDHB3   2170000 perm   2468 sec   (879 perm/sec)   p_kst 5.281106e-04   p_cons 9.711917e-01   p_joint 2.750691e-03

Joint ci ratio: 5.056264e-02	ci left: 2.680009e-03	ci right 2.819482e-03	k: 5993	n:2180000
Cons ci ratio: 4.571326e-04	ci left: 9.709850e-01	ci right 9.714294e-01	k: 2117233	n:2180000
KS ci ratio: 1.154636e-01	ci left: 4.979237e-04	ci right 5.593790e-04	k: 1151	n:2180000
PCDHB3   2180000 perm   2489 sec   (876 perm/sec)   p_kst 5.279817e-04   p_cons 9.712078e-01   p_joint 2.749083e-03

Joint ci ratio: 5.044915e-02	ci left: 2.679945e-03	ci right 2.819092e-03	k: 6020	n:2190000
Cons ci ratio: 4.561737e-04	ci left: 9.709749e-01	ci right 9.714184e-01	k: 2126922	n:2190000
KS ci ratio: 1.151143e-01	ci left: 4.987543e-04	ci right 5.601132e-04	k: 1158	n:2190000
PCDHB3   2190000 perm   2510 sec   (873 perm/sec)   p_kst 5.287671e-04   p_cons 9.711973e-01   p_joint 2.748858e-03

Joint ci ratio: 5.031557e-02	ci left: 2.682126e-03	ci right 2.821006e-03	k: 6052	n:2200000
Cons ci ratio: 4.551763e-04	ci left: 9.709704e-01	ci right 9.714129e-01	k: 2136623	n:2200000
KS ci ratio: 1.146698e-01	ci left: 5.004606e-04	ci right 5.617757e-04	k: 1167	n:2200000
PCDHB3   2200000 perm   2531 sec   (869 perm/sec)   p_kst 5.304545e-04   p_cons 9.711923e-01   p_joint 2.750909e-03

Joint ci ratio: 5.022444e-02	ci left: 2.679819e-03	ci right 2.818322e-03	k: 6074	n:2210000
Cons ci ratio: 4.541377e-04	ci left: 9.709718e-01	ci right 9.714133e-01	k: 2146337	n:2210000
KS ci ratio: 1.146209e-01	ci left: 4.986356e-04	ci right 5.596992e-04	k: 1168	n:2210000
PCDHB3   2210000 perm   2552 sec   (866 perm/sec)   p_kst 5.285068e-04   p_cons 9.711932e-01   p_joint 2.748416e-03

Joint ci ratio: 5.009674e-02	ci left: 2.681537e-03	ci right 2.819766e-03	k: 6105	n:2220000
Cons ci ratio: 4.532156e-04	ci left: 9.709597e-01	ci right 9.714003e-01	k: 2156021	n:2220000
KS ci ratio: 1.143279e-01	ci left: 4.990148e-04	ci right 5.599581e-04	k: 1174	n:2220000
PCDHB3   2220000 perm   2573 sec   (863 perm/sec)   p_kst 5.288288e-04   p_cons 9.711806e-01   p_joint 2.750000e-03

Joint ci ratio: 4.999453e-02	ci left: 2.680582e-03	ci right 2.818472e-03	k: 6130	n:2230000
Cons ci ratio: 4.523207e-04	ci left: 9.709450e-01	ci right 9.713847e-01	k: 2165699	n:2230000
KS ci ratio: 1.140854e-01	ci left: 4.989551e-04	ci right 5.597532e-04	k: 1179	n:2230000
PCDHB3   2230000 perm   2594 sec   (860 perm/sec)   p_kst 5.286996e-04   p_cons 9.711655e-01   p_joint 2.748879e-03

Joint ci ratio: 4.984830e-02	ci left: 2.684486e-03	ci right 2.822161e-03	k: 6166	n:2240000
Cons ci ratio: 4.512978e-04	ci left: 9.709470e-01	ci right 9.713857e-01	k: 2175414	n:2240000
KS ci ratio: 1.137485e-01	ci left: 4.997636e-04	ci right 5.604683e-04	k: 1186	n:2240000
PCDHB3   2240000 perm   2615 sec   (857 perm/sec)   p_kst 5.294643e-04   p_cons 9.711670e-01   p_joint 2.752679e-03

Joint ci ratio: 4.978389e-02	ci left: 2.679578e-03	ci right 2.816818e-03	k: 6182	n:2250000
Cons ci ratio: 4.502355e-04	ci left: 9.709548e-01	ci right 9.713925e-01	k: 2185142	n:2250000
KS ci ratio: 1.135573e-01	ci left: 4.992697e-04	ci right 5.598056e-04	k: 1190	n:2250000
PCDHB3   2250000 perm   2636 sec   (853 perm/sec)   p_kst 5.288889e-04   p_cons 9.711742e-01   p_joint 2.747556e-03

Joint ci ratio: 4.966753e-02	ci left: 2.680393e-03	ci right 2.817346e-03	k: 6211	n:2260000
Cons ci ratio: 4.491770e-04	ci left: 9.709629e-01	ci right 9.713996e-01	k: 2194871	n:2260000
KS ci ratio: 1.132723e-01	ci left: 4.996401e-04	ci right 5.600588e-04	k: 1196	n:2260000
PCDHB3   2260000 perm   2658 sec   (850 perm/sec)   p_kst 5.292035e-04   p_cons 9.711819e-01   p_joint 2.748230e-03

Joint ci ratio: 4.957589e-02	ci left: 2.678592e-03	ci right 2.815192e-03	k: 6234	n:2270000
Cons ci ratio: 4.482599e-04	ci left: 9.709542e-01	ci right 9.713900e-01	k: 2204562	n:2270000
KS ci ratio: 1.130836e-01	ci left: 4.991513e-04	ci right 5.594035e-04	k: 1200	n:2270000
PCDHB3   2270000 perm   2679 sec   (847 perm/sec)   p_kst 5.286344e-04   p_cons 9.711727e-01   p_joint 2.746256e-03

Joint ci ratio: 4.946494e-02	ci left: 2.678972e-03	ci right 2.815278e-03	k: 6262	n:2280000
Cons ci ratio: 4.472363e-04	ci left: 9.709596e-01	ci right 9.713944e-01	k: 2214285	n:2280000
KS ci ratio: 1.128958e-01	ci left: 4.986668e-04	ci right 5.587540e-04	k: 1204	n:2280000
PCDHB3   2280000 perm   2700 sec   (844 perm/sec)   p_kst 5.280702e-04   p_cons 9.711776e-01   p_joint 2.746491e-03

Joint ci ratio: 4.937441e-02	ci left: 2.677193e-03	ci right 2.813152e-03	k: 6285	n:2290000
Cons ci ratio: 4.463241e-04	ci left: 9.709519e-01	ci right 9.713858e-01	k: 2223978	n:2290000
KS ci ratio: 1.126623e-01	ci left: 4.986110e-04	ci right 5.585590e-04	k: 1209	n:2290000
PCDHB3   2290000 perm   2722 sec   (841 perm/sec)   p_kst 5.279476e-04   p_cons 9.711694e-01   p_joint 2.744541e-03

Joint ci ratio: 4.923744e-02	ci left: 2.680583e-03	ci right 2.816326e-03	k: 6320	n:2300000
Cons ci ratio: 4.453033e-04	ci left: 9.709586e-01	ci right 9.713915e-01	k: 2233704	n:2300000
KS ci ratio: 1.122455e-01	ci left: 5.002462e-04	ci right 5.601535e-04	k: 1218	n:2300000
PCDHB3   2300000 perm   2743 sec   (838 perm/sec)   p_kst 5.295652e-04   p_cons 9.711757e-01   p_joint 2.747826e-03

Joint ci ratio: 4.912099e-02	ci left: 2.681806e-03	ci right 2.817280e-03	k: 6350	n:2310000
Cons ci ratio: 4.443375e-04	ci left: 9.709592e-01	ci right 9.713911e-01	k: 2243416	n:2310000
KS ci ratio: 1.119703e-01	ci left: 5.006052e-04	ci right 5.603988e-04	k: 1224	n:2310000
PCDHB3   2310000 perm   2765 sec   (835 perm/sec)   p_kst 5.298701e-04   p_cons 9.711758e-01   p_joint 2.748918e-03

Joint ci ratio: 4.903233e-02	ci left: 2.680039e-03	ci right 2.815172e-03	k: 6373	n:2320000
Cons ci ratio: 4.433883e-04	ci left: 9.709585e-01	ci right 9.713895e-01	k: 2253125	n:2320000
KS ci ratio: 1.117879e-01	ci left: 5.001233e-04	ci right 5.597556e-04	k: 1228	n:2320000
PCDHB3   2320000 perm   2787 sec   (832 perm/sec)   p_kst 5.293103e-04   p_cons 9.711746e-01   p_joint 2.746983e-03

Joint ci ratio: 4.895566e-02	ci left: 2.677015e-03	ci right 2.811779e-03	k: 6393	n:2330000
Cons ci ratio: 4.424654e-04	ci left: 9.709552e-01	ci right 9.713853e-01	k: 2262828	n:2330000
KS ci ratio: 1.115612e-01	ci left: 5.000628e-04	ci right 5.595591e-04	k: 1233	n:2330000
PCDHB3   2330000 perm   2808 sec   (830 perm/sec)   p_kst 5.291845e-04   p_cons 9.711708e-01   p_joint 2.743777e-03

Joint ci ratio: 4.885263e-02	ci left: 2.676972e-03	ci right 2.811443e-03	k: 6420	n:2340000
Cons ci ratio: 4.415618e-04	ci left: 9.709502e-01	ci right 9.713794e-01	k: 2272527	n:2340000
KS ci ratio: 1.112013e-01	ci left: 5.012494e-04	ci right 5.606818e-04	k: 1241	n:2340000
PCDHB3   2340000 perm   2830 sec   (827 perm/sec)   p_kst 5.303419e-04   p_cons 9.711654e-01   p_joint 2.743590e-03

Joint ci ratio: 4.875783e-02	ci left: 2.676089e-03	ci right 2.810247e-03	k: 6445	n:2350000
Cons ci ratio: 4.406034e-04	ci left: 9.709529e-01	ci right 9.713812e-01	k: 2282244	n:2350000
KS ci ratio: 1.110227e-01	ci left: 5.007712e-04	ci right 5.600453e-04	k: 1245	n:2350000
PCDHB3   2350000 perm   2852 sec   (824 perm/sec)   p_kst 5.297872e-04   p_cons 9.711677e-01   p_joint 2.742553e-03

Joint ci ratio: 4.865981e-02	ci left: 2.675633e-03	ci right 2.809490e-03	k: 6471	n:2360000
Cons ci ratio: 4.397210e-04	ci left: 9.709467e-01	ci right 9.713742e-01	k: 2291940	n:2360000
KS ci ratio: 1.108006e-01	ci left: 5.007092e-04	ci right 5.598497e-04	k: 1250	n:2360000
PCDHB3   2360000 perm   2874 sec   (821 perm/sec)   p_kst 5.296610e-04   p_cons 9.711610e-01   p_joint 2.741949e-03

Joint ci ratio: 4.852869e-02	ci left: 2.678932e-03	ci right 2.812583e-03	k: 6506	n:2370000
Cons ci ratio: 4.387250e-04	ci left: 9.709558e-01	ci right 9.713823e-01	k: 2301672	n:2370000
KS ci ratio: 1.103603e-01	ci left: 5.026992e-04	ci right 5.618235e-04	k: 1260	n:2370000
PCDHB3   2370000 perm   2897 sec   (818 perm/sec)   p_kst 5.316456e-04   p_cons 9.711696e-01   p_joint 2.745148e-03

Joint ci ratio: 4.843948e-02	ci left: 2.677638e-03	ci right 2.810972e-03	k: 6530	n:2380000
Cons ci ratio: 4.378079e-04	ci left: 9.709555e-01	ci right 9.713811e-01	k: 2311382	n:2380000
KS ci ratio: 1.102293e-01	ci left: 5.018127e-04	ci right 5.607581e-04	k: 1263	n:2380000
PCDHB3   2380000 perm   2919 sec   (815 perm/sec)   p_kst 5.306723e-04   p_cons 9.711689e-01   p_joint 2.743697e-03

Joint ci ratio: 4.835815e-02	ci left: 2.675528e-03	ci right 2.808527e-03	k: 6552	n:2390000
Cons ci ratio: 4.369813e-04	ci left: 9.709444e-01	ci right 9.713691e-01	k: 2321066	n:2390000
KS ci ratio: 1.101423e-01	ci left: 5.005268e-04	ci right 5.592718e-04	k: 1265	n:2390000
PCDHB3   2390000 perm   2941 sec   (813 perm/sec)   p_kst 5.292887e-04   p_cons 9.711573e-01   p_joint 2.741423e-03

Joint ci ratio: 4.827724e-02	ci left: 2.673435e-03	ci right 2.806102e-03	k: 6574	n:2400000
Cons ci ratio: 4.360200e-04	ci left: 9.709513e-01	ci right 9.713751e-01	k: 2330793	n:2400000
KS ci ratio: 1.100555e-01	ci left: 4.992517e-04	ci right 5.577977e-04	k: 1267	n:2400000
PCDHB3   2400000 perm   2964 sec   (810 perm/sec)   p_kst 5.279167e-04   p_cons 9.711637e-01   p_joint 2.739167e-03

Joint ci ratio: 4.818574e-02	ci left: 2.672591e-03	ci right 2.804957e-03	k: 6599	n:2410000
Cons ci ratio: 4.351036e-04	ci left: 9.709531e-01	ci right 9.713761e-01	k: 2340508	n:2410000
KS ci ratio: 1.098391e-01	ci left: 4.991977e-04	ci right 5.576150e-04	k: 1272	n:2410000
PCDHB3   2410000 perm   2986 sec   (807 perm/sec)   p_kst 5.278008e-04   p_cons 9.711651e-01   p_joint 2.738174e-03

Joint ci ratio: 4.806930e-02	ci left: 2.674611e-03	ci right 2.806749e-03	k: 6631	n:2420000
Cons ci ratio: 4.342186e-04	ci left: 9.709516e-01	ci right 9.713737e-01	k: 2350215	n:2420000
KS ci ratio: 1.096241e-01	ci left: 4.991443e-04	ci right 5.574336e-04	k: 1277	n:2420000
PCDHB3   2420000 perm   3009 sec   (804 perm/sec)   p_kst 5.276860e-04   p_cons 9.711632e-01   p_joint 2.740083e-03

Joint ci ratio: 4.796453e-02	ci left: 2.675395e-03	ci right 2.807276e-03	k: 6660	n:2430000
Cons ci ratio: 4.333166e-04	ci left: 9.709530e-01	ci right 9.713742e-01	k: 2359929	n:2430000
KS ci ratio: 1.095813e-01	ci left: 4.974905e-04	ci right 5.555624e-04	k: 1278	n:2430000
PCDHB3   2430000 perm   3031 sec   (802 perm/sec)   p_kst 5.259259e-04   p_cons 9.711642e-01   p_joint 2.740741e-03

Joint ci ratio: 4.789276e-02	ci left: 2.672529e-03	ci right 2.804066e-03	k: 6680	n:2440000
Cons ci ratio: 4.324425e-04	ci left: 9.709515e-01	ci right 9.713719e-01	k: 2369636	n:2440000
KS ci ratio: 1.095386e-01	ci left: 4.958502e-04	ci right 5.537066e-04	k: 1279	n:2440000
PCDHB3   2440000 perm   3054 sec   (799 perm/sec)   p_kst 5.241803e-04   p_cons 9.711623e-01   p_joint 2.737705e-03

Joint ci ratio: 4.780343e-02	ci left: 2.671703e-03	ci right 2.802947e-03	k: 6705	n:2450000
Cons ci ratio: 4.315421e-04	ci left: 9.709542e-01	ci right 9.713737e-01	k: 2379353	n:2450000
KS ci ratio: 1.091978e-01	ci left: 4.970023e-04	ci right 5.548012e-04	k: 1287	n:2450000
PCDHB3   2450000 perm   3077 sec   (796 perm/sec)   p_kst 5.253061e-04   p_cons 9.711645e-01   p_joint 2.736735e-03

Joint ci ratio: 4.771104e-02	ci left: 2.671285e-03	ci right 2.802248e-03	k: 6731	n:2460000
Cons ci ratio: 4.306942e-04	ci left: 9.709507e-01	ci right 9.713693e-01	k: 2389055	n:2460000
KS ci ratio: 1.087343e-01	ci left: 4.993317e-04	ci right 5.571392e-04	k: 1298	n:2460000
PCDHB3   2460000 perm   3100 sec   (793 perm/sec)   p_kst 5.276423e-04   p_cons 9.711606e-01   p_joint 2.736179e-03

Joint ci ratio: 4.758389e-02	ci left: 2.674871e-03	ci right 2.805651e-03	k: 6767	n:2470000
Cons ci ratio: 4.299010e-04	ci left: 9.709407e-01	ci right 9.713586e-01	k: 2398741	n:2470000
KS ci ratio: 1.084425e-01	ci left: 5.000671e-04	ci right 5.577945e-04	k: 1305	n:2470000
PCDHB3   2470000 perm   3124 sec   (791 perm/sec)   p_kst 5.283401e-04   p_cons 9.711502e-01   p_joint 2.739676e-03

Joint ci ratio: 4.744727e-02	ci left: 2.679625e-03	ci right 2.810250e-03	k: 6806	n:2480000
Cons ci ratio: 4.289886e-04	ci left: 9.709470e-01	ci right 9.713640e-01	k: 2408467	n:2480000
KS ci ratio: 1.080707e-01	ci left: 5.015815e-04	ci right 5.592726e-04	k: 1314	n:2480000
PCDHB3   2480000 perm   3147 sec   (788 perm/sec)   p_kst 5.298387e-04   p_cons 9.711560e-01   p_joint 2.744355e-03

Joint ci ratio: 4.736388e-02	ci left: 2.678387e-03	ci right 2.808717e-03	k: 6830	n:2490000
Cons ci ratio: 4.281465e-04	ci left: 9.709448e-01	ci right 9.713610e-01	k: 2418172	n:2490000
KS ci ratio: 1.079067e-01	ci left: 5.011302e-04	ci right 5.586763e-04	k: 1318	n:2490000
PCDHB3   2490000 perm   3170 sec   (785 perm/sec)   p_kst 5.293173e-04   p_cons 9.711534e-01   p_joint 2.742972e-03

Joint ci ratio: 4.727747e-02	ci left: 2.677556e-03	ci right 2.807601e-03	k: 6855	n:2500000
Cons ci ratio: 4.273702e-04	ci left: 9.709345e-01	ci right 9.713500e-01	k: 2427857	n:2500000
KS ci ratio: 1.078251e-01	ci left: 4.999040e-04	ci right 5.572632e-04	k: 1320	n:2500000
PCDHB3   2500000 perm   3194 sec   (783 perm/sec)   p_kst 5.280000e-04   p_cons 9.711428e-01   p_joint 2.742000e-03

Joint ci ratio: 4.717092e-02	ci left: 2.679093e-03	ci right 2.808911e-03	k: 6886	n:2510000
Cons ci ratio: 4.265769e-04	ci left: 9.709272e-01	ci right 9.713418e-01	k: 2437549	n:2510000
KS ci ratio: 1.076622e-01	ci left: 4.994631e-04	ci right 5.566796e-04	k: 1324	n:2510000
PCDHB3   2510000 perm   3217 sec   (780 perm/sec)   p_kst 5.274900e-04   p_cons 9.711351e-01   p_joint 2.743426e-03

Joint ci ratio: 4.708214e-02	ci left: 2.678657e-03	ci right 2.808204e-03	k: 6912	n:2520000
Cons ci ratio: 4.257940e-04	ci left: 9.709191e-01	ci right 9.713330e-01	k: 2447239	n:2520000
KS ci ratio: 1.075001e-01	ci left: 4.990257e-04	ci right 5.561005e-04	k: 1328	n:2520000
PCDHB3   2520000 perm   3240 sec   (778 perm/sec)   p_kst 5.269841e-04   p_cons 9.711266e-01   p_joint 2.742857e-03

Joint ci ratio: 4.699726e-02	ci left: 2.677835e-03	ci right 2.807102e-03	k: 6937	n:2530000
Cons ci ratio: 4.248866e-04	ci left: 9.709281e-01	ci right 9.713411e-01	k: 2456972	n:2530000
KS ci ratio: 1.074598e-01	ci left: 4.974378e-04	ci right 5.543084e-04	k: 1329	n:2530000
PCDHB3   2530000 perm   3263 sec   (775 perm/sec)   p_kst 5.252964e-04   p_cons 9.711352e-01   p_joint 2.741897e-03

Joint ci ratio: 4.690946e-02	ci left: 2.677408e-03	ci right 2.806407e-03	k: 6963	n:2540000
Cons ci ratio: 4.240951e-04	ci left: 9.709225e-01	ci right 9.713347e-01	k: 2466668	n:2540000
KS ci ratio: 1.072584e-01	ci left: 4.973951e-04	ci right 5.541474e-04	k: 1334	n:2540000
PCDHB3   2540000 perm   3288 sec   (773 perm/sec)   p_kst 5.251969e-04   p_cons 9.711291e-01   p_joint 2.741339e-03

Joint ci ratio: 4.680201e-02	ci left: 2.679311e-03	ci right 2.808097e-03	k: 6995	n:2550000
Cons ci ratio: 4.233020e-04	ci left: 9.709177e-01	ci right 9.713291e-01	k: 2476366	n:2550000
KS ci ratio: 1.069782e-01	ci left: 4.981161e-04	ci right 5.547929e-04	k: 1341	n:2550000
PCDHB3   2550000 perm   3311 sec   (770 perm/sec)   p_kst 5.258824e-04   p_cons 9.711239e-01   p_joint 2.743137e-03

Joint ci ratio: 4.670529e-02	ci left: 2.680040e-03	ci right 2.808588e-03	k: 7024	n:2560000
Cons ci ratio: 4.224457e-04	ci left: 9.709219e-01	ci right 9.713325e-01	k: 2486087	n:2560000
KS ci ratio: 1.066212e-01	ci left: 4.995920e-04	ci right 5.562352e-04	k: 1350	n:2560000
PCDHB3   2560000 perm   3335 sec   (768 perm/sec)   p_kst 5.273438e-04   p_cons 9.711277e-01   p_joint 2.743750e-03

Joint ci ratio: 4.662575e-02	ci left: 2.678842e-03	ci right 2.807108e-03	k: 7048	n:2570000
Cons ci ratio: 4.216034e-04	ci left: 9.709249e-01	ci right 9.713347e-01	k: 2495805	n:2570000
KS ci ratio: 1.065425e-01	ci left: 4.984055e-04	ci right 5.548699e-04	k: 1352	n:2570000
PCDHB3   2570000 perm   3359 sec   (765 perm/sec)   p_kst 5.260700e-04   p_cons 9.711304e-01   p_joint 2.742412e-03

Joint ci ratio: 4.650048e-02	ci left: 2.683016e-03	ci right 2.811127e-03	k: 7086	n:2580000
Cons ci ratio: 4.207689e-04	ci left: 9.709275e-01	ci right 9.713365e-01	k: 2505522	n:2580000
KS ci ratio: 1.063461e-01	ci left: 4.983601e-04	ci right 5.547088e-04	k: 1357	n:2580000
PCDHB3   2580000 perm   3383 sec   (763 perm/sec)   p_kst 5.259690e-04   p_cons 9.711326e-01   p_joint 2.746512e-03

Joint ci ratio: 4.641870e-02	ci left: 2.682197e-03	ci right 2.810038e-03	k: 7111	n:2590000
Cons ci ratio: 4.199163e-04	ci left: 9.709332e-01	ci right 9.713414e-01	k: 2515247	n:2590000
KS ci ratio: 1.062289e-01	ci left: 4.975635e-04	ci right 5.537561e-04	k: 1360	n:2590000
PCDHB3   2590000 perm   3409 sec   (760 perm/sec)   p_kst 5.250965e-04   p_cons 9.711378e-01   p_joint 2.745560e-03

Joint ci ratio: 4.634387e-02	ci left: 2.680625e-03	ci right 2.808179e-03	k: 7134	n:2600000
Cons ci ratio: 4.191263e-04	ci left: 9.709312e-01	ci right 9.713386e-01	k: 2524952	n:2600000
KS ci ratio: 1.061121e-01	ci left: 4.967730e-04	ci right 5.528108e-04	k: 1363	n:2600000
PCDHB3   2600000 perm   3433 sec   (757 perm/sec)   p_kst 5.242308e-04   p_cons 9.711354e-01   p_joint 2.743846e-03

Joint ci ratio: 4.626939e-02	ci left: 2.679064e-03	ci right 2.806334e-03	k: 7157	n:2610000
Cons ci ratio: 4.182407e-04	ci left: 9.709426e-01	ci right 9.713491e-01	k: 2534692	n:2610000
KS ci ratio: 1.059181e-01	ci left: 4.967345e-04	ci right 5.526592e-04	k: 1368	n:2610000
PCDHB3   2610000 perm   3458 sec   (755 perm/sec)   p_kst 5.241379e-04   p_cons 9.711464e-01   p_joint 2.742146e-03

Joint ci ratio: 4.615662e-02	ci left: 2.682043e-03	ci right 2.809136e-03	k: 7192	n:2620000
Cons ci ratio: 4.173720e-04	ci left: 9.709524e-01	ci right 9.713581e-01	k: 2544428	n:2620000
KS ci ratio: 1.056100e-01	ci left: 4.978113e-04	ci right 5.536840e-04	k: 1376	n:2620000
PCDHB3   2620000 perm   3482 sec   (752 perm/sec)   p_kst 5.251908e-04   p_cons 9.711557e-01   p_joint 2.745038e-03

Joint ci ratio: 4.606384e-02	ci left: 2.682745e-03	ci right 2.809609e-03	k: 7221	n:2630000
Cons ci ratio: 4.165794e-04	ci left: 9.709525e-01	ci right 9.713575e-01	k: 2554139	n:2630000
KS ci ratio: 1.053806e-01	ci left: 4.981396e-04	ci right 5.539203e-04	k: 1382	n:2630000
PCDHB3   2630000 perm   3507 sec   (750 perm/sec)   p_kst 5.254753e-04   p_cons 9.711555e-01   p_joint 2.745627e-03

Joint ci ratio: 4.596844e-02	ci left: 2.683816e-03	ci right 2.810460e-03	k: 7251	n:2640000
Cons ci ratio: 4.157799e-04	ci left: 9.709542e-01	ci right 9.713584e-01	k: 2563854	n:2640000
KS ci ratio: 1.050393e-01	ci left: 4.995721e-04	ci right 5.553208e-04	k: 1391	n:2640000
PCDHB3   2640000 perm   3532 sec   (748 perm/sec)   p_kst 5.268939e-04   p_cons 9.711568e-01   p_joint 2.746591e-03

Joint ci ratio: 4.583893e-02	ci left: 2.688983e-03	ci right 2.815504e-03	k: 7292	n:2650000
Cons ci ratio: 4.150242e-04	ci left: 9.709506e-01	ci right 9.713540e-01	k: 2573555	n:2650000
KS ci ratio: 1.047387e-01	ci left: 5.006267e-04	ci right 5.563233e-04	k: 1399	n:2650000
PCDHB3   2650000 perm   3556 sec   (745 perm/sec)   p_kst 5.279245e-04   p_cons 9.711528e-01   p_joint 2.751698e-03

Joint ci ratio: 4.576372e-02	ci left: 2.687793e-03	ci right 2.814045e-03	k: 7316	n:2660000
Cons ci ratio: 4.142170e-04	ci left: 9.709546e-01	ci right 9.713572e-01	k: 2583276	n:2660000
KS ci ratio: 1.045522e-01	ci left: 5.005751e-04	ci right 5.561607e-04	k: 1404	n:2660000
PCDHB3   2660000 perm   3581 sec   (743 perm/sec)   p_kst 5.278195e-04   p_cons 9.711564e-01   p_joint 2.750376e-03

Joint ci ratio: 4.567640e-02	ci left: 2.688093e-03	ci right 2.814113e-03	k: 7344	n:2670000
Cons ci ratio: 4.135002e-04	ci left: 9.709468e-01	ci right 9.713488e-01	k: 2592966	n:2670000
KS ci ratio: 1.044779e-01	ci left: 4.994298e-04	ci right 5.548464e-04	k: 1406	n:2670000
PCDHB3   2670000 perm   3606 sec   (740 perm/sec)   p_kst 5.265918e-04   p_cons 9.711483e-01   p_joint 2.750562e-03

Joint ci ratio: 4.555552e-02	ci left: 2.692450e-03	ci right 2.818330e-03	k: 7383	n:2680000
Cons ci ratio: 4.126744e-04	ci left: 9.709545e-01	ci right 9.713557e-01	k: 2602697	n:2680000
KS ci ratio: 1.041821e-01	ci left: 5.004734e-04	ci right 5.558390e-04	k: 1414	n:2680000
PCDHB3   2680000 perm   3631 sec   (738 perm/sec)   p_kst 5.276119e-04   p_cons 9.711556e-01   p_joint 2.754851e-03

Joint ci ratio: 4.548786e-02	ci left: 2.690526e-03	ci right 2.816125e-03	k: 7405	n:2690000
Cons ci ratio: 4.118890e-04	ci left: 9.709573e-01	ci right 9.713577e-01	k: 2612415	n:2690000
KS ci ratio: 1.040352e-01	ci left: 5.000612e-04	ci right 5.552984e-04	k: 1418	n:2690000
PCDHB3   2690000 perm   3656 sec   (736 perm/sec)   p_kst 5.271375e-04   p_cons 9.711580e-01   p_joint 2.752788e-03

Joint ci ratio: 4.539904e-02	ci left: 2.691180e-03	ci right 2.816557e-03	k: 7434	n:2700000
Cons ci ratio: 4.110809e-04	ci left: 9.709638e-01	ci right 9.713634e-01	k: 2622143	n:2700000
KS ci ratio: 1.039620e-01	ci left: 4.989306e-04	ci right 5.540017e-04	k: 1420	n:2700000
PCDHB3   2700000 perm   3681 sec   (734 perm/sec)   p_kst 5.259259e-04   p_cons 9.711641e-01   p_joint 2.753333e-03

Joint ci ratio: 4.530467e-02	ci left: 2.692558e-03	ci right 2.817733e-03	k: 7465	n:2710000
Cons ci ratio: 4.103154e-04	ci left: 9.709650e-01	ci right 9.713639e-01	k: 2631857	n:2710000
KS ci ratio: 1.037796e-01	ci left: 4.988866e-04	ci right 5.538504e-04	k: 1425	n:2710000
PCDHB3   2710000 perm   3706 sec   (731 perm/sec)   p_kst 5.258303e-04   p_cons 9.711649e-01   p_joint 2.754613e-03

Joint ci ratio: 4.522297e-02	ci left: 2.692473e-03	ci right 2.817412e-03	k: 7492	n:2720000
Cons ci ratio: 4.095191e-04	ci left: 9.709711e-01	ci right 9.713691e-01	k: 2641584	n:2720000
KS ci ratio: 1.036344e-01	ci left: 4.984849e-04	ci right 5.533229e-04	k: 1429	n:2720000
PCDHB3   2720000 perm   3731 sec   (729 perm/sec)   p_kst 5.253676e-04   p_cons 9.711706e-01   p_joint 2.754412e-03

Joint ci ratio: 4.511466e-02	ci left: 2.695649e-03	ci right 2.820428e-03	k: 7528	n:2730000
Cons ci ratio: 4.088157e-04	ci left: 9.709649e-01	ci right 9.713623e-01	k: 2651278	n:2730000
KS ci ratio: 1.033456e-01	ci left: 4.995135e-04	ci right 5.543023e-04	k: 1437	n:2730000
PCDHB3   2730000 perm   3756 sec   (727 perm/sec)   p_kst 5.263736e-04   p_cons 9.711641e-01   p_joint 2.757509e-03

Joint ci ratio: 4.501308e-02	ci left: 2.698080e-03	ci right 2.822683e-03	k: 7562	n:2740000
Cons ci ratio: 4.081186e-04	ci left: 9.709584e-01	ci right 9.713552e-01	k: 2660971	n:2740000
KS ci ratio: 1.032022e-01	ci left: 4.991126e-04	ci right 5.537768e-04	k: 1441	n:2740000
PCDHB3   2740000 perm   3782 sec   (724 perm/sec)   p_kst 5.259124e-04   p_cons 9.711573e-01   p_joint 2.759854e-03

Joint ci ratio: 4.497159e-02	ci left: 2.693302e-03	ci right 2.817567e-03	k: 7576	n:2750000
Cons ci ratio: 4.073668e-04	ci left: 9.709601e-01	ci right 9.713560e-01	k: 2670686	n:2750000
KS ci ratio: 1.030951e-01	ci left: 4.983604e-04	ci right 5.528821e-04	k: 1444	n:2750000
PCDHB3   2750000 perm   3808 sec   (722 perm/sec)   p_kst 5.250909e-04   p_cons 9.711585e-01   p_joint 2.754909e-03

Joint ci ratio: 4.490649e-02	ci left: 2.691425e-03	ci right 2.815419e-03	k: 7598	n:2760000
Cons ci ratio: 4.066823e-04	ci left: 9.709529e-01	ci right 9.713482e-01	k: 2680377	n:2760000
KS ci ratio: 1.028817e-01	ci left: 4.986727e-04	ci right 5.531088e-04	k: 1450	n:2760000
PCDHB3   2760000 perm   3833 sec   (720 perm/sec)   p_kst 5.253623e-04   p_cons 9.711511e-01   p_joint 2.752899e-03

Joint ci ratio: 4.482987e-02	ci left: 2.690990e-03	ci right 2.814747e-03	k: 7624	n:2770000
Cons ci ratio: 4.059855e-04	ci left: 9.709480e-01	ci right 9.713427e-01	k: 2690074	n:2770000
KS ci ratio: 1.027402e-01	ci left: 4.982793e-04	ci right 5.525932e-04	k: 1454	n:2770000
PCDHB3   2770000 perm   3859 sec   (718 perm/sec)   p_kst 5.249097e-04   p_cons 9.711458e-01   p_joint 2.752347e-03

Joint ci ratio: 4.474778e-02	ci left: 2.691269e-03	ci right 2.814806e-03	k: 7652	n:2780000
Cons ci ratio: 4.051778e-04	ci left: 9.709591e-01	ci right 9.713529e-01	k: 2699815	n:2780000
KS ci ratio: 1.024939e-01	ci left: 4.989403e-04	ci right 5.531880e-04	k: 1461	n:2780000
PCDHB3   2780000 perm   3885 sec   (716 perm/sec)   p_kst 5.255396e-04   p_cons 9.711565e-01   p_joint 2.752518e-03

Joint ci ratio: 4.464575e-02	ci left: 2.694028e-03	ci right 2.817402e-03	k: 7687	n:2790000
Cons ci ratio: 4.044266e-04	ci left: 9.709628e-01	ci right 9.713559e-01	k: 2709536	n:2790000
KS ci ratio: 1.023540e-01	ci left: 4.985489e-04	ci right 5.526757e-04	k: 1465	n:2790000
PCDHB3   2790000 perm   3911 sec   (713 perm/sec)   p_kst 5.250896e-04   p_cons 9.711599e-01   p_joint 2.755197e-03

Joint ci ratio: 4.455309e-02	ci left: 2.695707e-03	ci right 2.818896e-03	k: 7719	n:2800000
Cons ci ratio: 4.037362e-04	ci left: 9.709587e-01	ci right 9.713511e-01	k: 2719235	n:2800000
KS ci ratio: 1.020066e-01	ci left: 5.002486e-04	ci right 5.543645e-04	k: 1475	n:2800000
PCDHB3   2800000 perm   3937 sec   (711 perm/sec)   p_kst 5.267857e-04   p_cons 9.711554e-01   p_joint 2.756786e-03

Joint ci ratio: 4.449555e-02	ci left: 2.693152e-03	ci right 2.816061e-03	k: 7739	n:2810000
Cons ci ratio: 4.031184e-04	ci left: 9.709449e-01	ci right 9.713367e-01	k: 2728907	n:2810000
KS ci ratio: 1.019376e-01	ci left: 4.991619e-04	ci right 5.531216e-04	k: 1477	n:2810000
PCDHB3   2810000 perm   3962 sec   (709 perm/sec)   p_kst 5.256228e-04   p_cons 9.711413e-01   p_joint 2.754093e-03

Joint ci ratio: 4.442675e-02	ci left: 2.692018e-03	ci right 2.814680e-03	k: 7763	n:2820000
Cons ci ratio: 4.024015e-04	ci left: 9.709454e-01	ci right 9.713366e-01	k: 2738619	n:2820000
KS ci ratio: 1.018000e-01	ci left: 4.987742e-04	ci right 5.526147e-04	k: 1481	n:2820000
PCDHB3   2820000 perm   3988 sec   (707 perm/sec)   p_kst 5.251773e-04   p_cons 9.711415e-01   p_joint 2.752837e-03

Joint ci ratio: 4.432974e-02	ci left: 2.694386e-03	ci right 2.816882e-03	k: 7797	n:2830000
Cons ci ratio: 4.016251e-04	ci left: 9.709549e-01	ci right 9.713452e-01	k: 2748356	n:2830000
KS ci ratio: 1.016287e-01	ci left: 4.987335e-04	ci right 5.524737e-04	k: 1486	n:2830000
PCDHB3   2830000 perm   4014 sec   (705 perm/sec)   p_kst 5.250883e-04   p_cons 9.711505e-01   p_joint 2.755124e-03

Joint ci ratio: 4.425604e-02	ci left: 2.693953e-03	ci right 2.816220e-03	k: 7823	n:2840000
Cons ci ratio: 4.009035e-04	ci left: 9.709571e-01	ci right 9.713468e-01	k: 2758073	n:2840000
KS ci ratio: 1.015264e-01	ci left: 4.980069e-04	ci right 5.516116e-04	k: 1489	n:2840000
PCDHB3   2840000 perm   4041 sec   (703 perm/sec)   p_kst 5.242958e-04   p_cons 9.711525e-01   p_joint 2.754577e-03

Joint ci ratio: 4.417988e-02	ci left: 2.693869e-03	ci right 2.815917e-03	k: 7850	n:2850000
Cons ci ratio: 4.001858e-04	ci left: 9.709594e-01	ci right 9.713484e-01	k: 2767790	n:2850000
KS ci ratio: 1.013904e-01	ci left: 4.976274e-04	ci right 5.511152e-04	k: 1493	n:2850000
PCDHB3   2850000 perm   4067 sec   (701 perm/sec)   p_kst 5.238596e-04   p_cons 9.711544e-01   p_joint 2.754386e-03

Joint ci ratio: 4.412096e-02	ci left: 2.691712e-03	ci right 2.813494e-03	k: 7871	n:2860000
Cons ci ratio: 3.994246e-04	ci left: 9.709683e-01	ci right 9.713566e-01	k: 2777526	n:2860000
KS ci ratio: 1.012212e-01	ci left: 4.975914e-04	ci right 5.509808e-04	k: 1498	n:2860000
PCDHB3   2860000 perm   4093 sec   (699 perm/sec)   p_kst 5.237762e-04   p_cons 9.711629e-01   p_joint 2.752098e-03

Joint ci ratio: 4.402873e-02	ci left: 2.693704e-03	ci right 2.815316e-03	k: 7904	n:2870000
Cons ci ratio: 3.988041e-04	ci left: 9.709580e-01	ci right 9.713456e-01	k: 2787207	n:2870000
KS ci ratio: 1.009856e-01	ci left: 4.982350e-04	ci right 5.515616e-04	k: 1505	n:2870000
PCDHB3   2870000 perm   4120 sec   (697 perm/sec)   p_kst 5.243902e-04   p_cons 9.711523e-01   p_joint 2.754007e-03

Joint ci ratio: 4.392597e-02	ci left: 2.697057e-03	ci right 2.818529e-03	k: 7941	n:2880000
Cons ci ratio: 3.981815e-04	ci left: 9.709484e-01	ci right 9.713354e-01	k: 2796890	n:2880000
KS ci ratio: 1.007850e-01	ci left: 4.985358e-04	ci right 5.517824e-04	k: 1511	n:2880000
PCDHB3   2880000 perm   4146 sec   (695 perm/sec)   p_kst 5.246528e-04   p_cons 9.711424e-01   p_joint 2.757292e-03

Joint ci ratio: 4.383771e-02	ci left: 2.698676e-03	ci right 2.819971e-03	k: 7973	n:2890000
Cons ci ratio: 3.975200e-04	ci left: 9.709447e-01	ci right 9.713311e-01	k: 2806590	n:2890000
KS ci ratio: 1.006188e-01	ci left: 4.984973e-04	ci right 5.516468e-04	k: 1516	n:2890000
PCDHB3   2890000 perm   4172 sec   (693 perm/sec)   p_kst 5.245675e-04   p_cons 9.711384e-01   p_joint 2.758824e-03

Joint ci ratio: 4.376918e-02	ci left: 2.697897e-03	ci right 2.818962e-03	k: 7998	n:2900000
Cons ci ratio: 3.967837e-04	ci left: 9.709522e-01	ci right 9.713379e-01	k: 2816322	n:2900000
KS ci ratio: 1.004864e-01	ci left: 4.981230e-04	ci right 5.511585e-04	k: 1520	n:2900000
PCDHB3   2900000 perm   4200 sec   (691 perm/sec)   p_kst 5.241379e-04   p_cons 9.711455e-01   p_joint 2.757931e-03

Joint ci ratio: 4.368185e-02	ci left: 2.699502e-03	ci right 2.820391e-03	k: 8030	n:2910000
Cons ci ratio: 3.960685e-04	ci left: 9.709572e-01	ci right 9.713422e-01	k: 2826047	n:2910000
KS ci ratio: 1.002232e-01	ci left: 4.990914e-04	ci right 5.520826e-04	k: 1528	n:2910000
PCDHB3   2910000 perm   4226 sec   (689 perm/sec)   p_kst 5.250859e-04   p_cons 9.711502e-01   p_joint 2.759450e-03

Joint ci ratio: 4.362490e-02	ci left: 2.697370e-03	ci right 2.818003e-03	k: 8051	n:2920000
Cons ci ratio: 3.954126e-04	ci left: 9.709543e-01	ci right 9.713386e-01	k: 2835749	n:2920000
KS ci ratio: 1.001905e-01	ci left: 4.977160e-04	ci right 5.505430e-04	k: 1529	n:2920000
PCDHB3   2920000 perm   4253 sec   (687 perm/sec)   p_kst 5.236301e-04   p_cons 9.711469e-01   p_joint 2.757192e-03

Joint ci ratio: 4.355736e-02	ci left: 2.696604e-03	ci right 2.817010e-03	k: 8076	n:2930000
Cons ci ratio: 3.947625e-04	ci left: 9.709510e-01	ci right 9.713347e-01	k: 2845450	n:2930000
KS ci ratio: 9.989703e-02	ci left: 4.990122e-04	ci right 5.518125e-04	k: 1538	n:2930000
PCDHB3   2930000 perm   4280 sec   (685 perm/sec)   p_kst 5.249147e-04   p_cons 9.711433e-01   p_joint 2.756314e-03

Outputting figure to mutsig2_images.part000000000127/PCDHB3.2_2395_2930000_0.00052491_0.97114_0.0027563.png
                gene_name: PCDHB3
               theta_stop: 0.100 
                    nperm: 2930000 
                     p_ks: 0.00052 
        ci_ks_bounds_left: 0.00050 
       ci_ks_bounds_right: 0.00055 
                   p_cons: 0.97 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.97 
                  p_joint: 0.0028 
     ci_joint_bounds_left: 0.0027 
    ci_joint_bounds_right: 0.0028 

Current progress: 50 percent done.
PCDHB6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.808752e-03	ci left: 9.673099e-01	ci right 9.740122e-01	k: 9708	n:10000
Cons ci ratio: 2.420826e-02	ci left: 7.150233e-01	ci right 7.326461e-01	k: 7239	n:10000
KS ci ratio: 2.559385e-02	ci left: 6.920201e-01	ci right 7.100626e-01	k: 7011	n:10000
PCDHB6   10000 perm   2 sec   (5983 perm/sec)   p_kst 7.011000e-01   p_cons 7.239000e-01   p_joint 9.708000e-01

Outputting figure to mutsig2_images.part000000000127/PCDHB6.2_2389_10000_0.7011_0.7239_0.9708.png
                gene_name: PCDHB6
               theta_stop: 0.026 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.69 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.72 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.97 

Current progress: 60 percent done.
PCDHGA4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.112145e-01	ci left: 1.043218e-01	ci right 1.167061e-01	k: 1104	n:10000
Cons ci ratio: 1.223415e-01	ci left: 8.737675e-02	ci right 9.886154e-02	k: 930	n:10000
KS ci ratio: 8.392110e-02	ci left: 1.715307e-01	ci right 1.866567e-01	k: 1790	n:10000
PCDHGA4   10000 perm   2 sec   (5675 perm/sec)   p_kst 1.790000e-01   p_cons 9.300000e-02   p_joint 1.104000e-01

Joint ci ratio: 8.508172e-02	ci left: 9.185310e-02	ci right 1.000648e-01	k: 1918	n:20000
Cons ci ratio: 8.658713e-02	ci left: 8.891121e-02	ci right 9.700757e-02	k: 1858	n:20000
KS ci ratio: 5.940263e-02	ci left: 1.734620e-01	ci right 1.841316e-01	k: 3575	n:20000
PCDHGA4   20000 perm   4 sec   (5074 perm/sec)   p_kst 1.787500e-01   p_cons 9.290000e-02   p_joint 9.590000e-02

Outputting figure to mutsig2_images.part000000000127/PCDHGA4.2_2854_20000_0.17875_0.0929_0.0959.png
                gene_name: PCDHGA4
               theta_stop: 0.087 
                    nperm: 20000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.093 
      ci_cons_bounds_left: 0.089 
     ci_cons_bounds_right: 0.097 
                  p_joint: 0.096 
     ci_joint_bounds_left: 0.092 
    ci_joint_bounds_right: 0.10 

Current progress: 70 percent done.
PCGF2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.832774e-02	ci left: 6.475005e-01	ci right 6.662080e-01	k: 6569	n:10000
Cons ci ratio: 1.300507e-03	ci left: 9.981617e-01	ci right 9.995204e-01	k: 9990	n:10000
KS ci ratio: 7.714643e-02	ci left: 1.972229e-01	ci right 2.131492e-01	k: 2051	n:10000
PCGF2   10000 perm   2 sec   (6464 perm/sec)   p_kst 2.051000e-01   p_cons 9.990000e-01   p_joint 6.569000e-01

Outputting figure to mutsig2_images.part000000000127/PCGF2.2_1071_10000_0.2051_0.999_0.6569.png
                gene_name: PCGF2
               theta_stop: 0.077 
                    nperm: 10000 
                     p_ks: 0.21 
        ci_ks_bounds_left: 0.20 
       ci_ks_bounds_right: 0.21 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.66 
     ci_joint_bounds_left: 0.65 
    ci_joint_bounds_right: 0.67 

Current progress: 80 percent done.
PCSK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.765105e-01	ci left: 1.697368e-02	ci right 2.251108e-02	k: 196	n:10000
Cons ci ratio: 5.697292e-02	ci left: 3.120513e-01	ci right 3.304529e-01	k: 3212	n:10000
KS ci ratio: 2.765105e-01	ci left: 1.697368e-02	ci right 2.251108e-02	k: 196	n:10000
PCSK1   10000 perm   2 sec   (5843 perm/sec)   p_kst 1.960000e-02   p_cons 3.212000e-01   p_joint 1.960000e-02

Joint ci ratio: 7.020755e-02	ci left: 1.300953e-01	ci right 1.396111e-01	k: 2696	n:20000
Cons ci ratio: 4.056941e-02	ci left: 3.117466e-01	ci right 3.247063e-01	k: 6364	n:20000
KS ci ratio: 1.937784e-01	ci left: 1.810475e-02	ci right 2.203652e-02	k: 400	n:20000
PCSK1   20000 perm   4 sec   (5270 perm/sec)   p_kst 2.000000e-02   p_cons 3.182000e-01   p_joint 1.348000e-01

Joint ci ratio: 1.620422e-01	ci left: 1.758116e-02	ci right 2.071294e-02	k: 573	n:30000
Cons ci ratio: 3.314899e-02	ci left: 3.126318e-01	ci right 3.232035e-01	k: 9537	n:30000
KS ci ratio: 1.620422e-01	ci left: 1.758116e-02	ci right 2.071294e-02	k: 573	n:30000
PCSK1   30000 perm   6 sec   (5013 perm/sec)   p_kst 1.910000e-02   p_cons 3.179000e-01   p_joint 1.910000e-02

Joint ci ratio: 1.396219e-01	ci left: 1.797425e-02	ci right 2.069616e-02	k: 772	n:40000
Cons ci ratio: 2.870677e-02	ci left: 3.133624e-01	ci right 3.225141e-01	k: 12717	n:40000
KS ci ratio: 1.396219e-01	ci left: 1.797425e-02	ci right 2.069616e-02	k: 772	n:40000
PCSK1   40000 perm   8 sec   (4842 perm/sec)   p_kst 1.930000e-02   p_cons 3.179250e-01   p_joint 1.930000e-02

Joint ci ratio: 1.252293e-01	ci left: 1.801515e-02	ci right 2.044113e-02	k: 960	n:50000
Cons ci ratio: 2.580873e-02	ci left: 3.116268e-01	ci right 3.197946e-01	k: 15785	n:50000
KS ci ratio: 1.252293e-01	ci left: 1.801515e-02	ci right 2.044113e-02	k: 960	n:50000
PCSK1   50000 perm   11 sec   (4649 perm/sec)   p_kst 1.920000e-02   p_cons 3.157000e-01   p_joint 1.920000e-02

Joint ci ratio: 6.533116e-05	ci left: 9.999385e-01	ci right 1	k: 60000	n:60000
Cons ci ratio: 2.361942e-02	ci left: 3.109018e-01	ci right 3.183495e-01	k: 18877	n:60000
KS ci ratio: 1.130359e-01	ci left: 1.853818e-02	ci right 2.077529e-02	k: 1178	n:60000
PCSK1   60000 perm   13 sec   (4556 perm/sec)   p_kst 1.963333e-02   p_cons 3.146167e-01   p_joint 1

Joint ci ratio: 5.599840e-05	ci left: 9.999473e-01	ci right 1	k: 70000	n:70000
Cons ci ratio: 2.187482e-02	ci left: 3.110325e-01	ci right 3.179258e-01	k: 22013	n:70000
KS ci ratio: 1.030760e-01	ci left: 1.919845e-02	ci right 2.129873e-02	k: 1416	n:70000
PCSK1   70000 perm   16 sec   (4447 perm/sec)   p_kst 2.022857e-02   p_cons 3.144714e-01   p_joint 1

Joint ci ratio: 4.899878e-05	ci left: 9.999539e-01	ci right 1	k: 80000	n:80000
Cons ci ratio: 2.045720e-02	ci left: 3.113578e-01	ci right 3.178056e-01	k: 25166	n:80000
KS ci ratio: 9.634077e-02	ci left: 1.929733e-02	ci right 2.126268e-02	k: 1621	n:80000
PCSK1   80000 perm   18 sec   (4351 perm/sec)   p_kst 2.026250e-02   p_cons 3.145750e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000127/PCSK1.2_2361_80000_0.020262_0.31457_1.png
                gene_name: PCSK1
               theta_stop: 0.096 
                    nperm: 80000 
                     p_ks: 0.020 
        ci_ks_bounds_left: 0.019 
       ci_ks_bounds_right: 0.021 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.32 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 90 percent done.
PCSK4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.103091e-02	ci left: 7.682051e-01	ci right 7.846336e-01	k: 7765	n:10000
KS ci ratio: 8.625171e-03	ci left: 9.496057e-01	ci right 9.579274e-01	k: 9539	n:10000
PCSK4   10000 perm   2 sec   (5703 perm/sec)   p_kst 9.539000e-01   p_cons 7.765000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000127/PCSK4.2_2328_10000_0.9539_0.7765_1.png
                gene_name: PCSK4
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.96 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.78 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000127
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 127 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1712>
Subject: Job 8704302: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1712>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000128> was used as the working directory.
Started at Thu Nov 15 19:35:30 2012
Results reported at Thu Nov 15 19:38:03 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000128.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000128.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 128  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000128.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    144.26 sec.
    Max Memory :      5702 MB
    Max Swap   :      8427 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
128
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 128
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 128: processing genes 11490 - 11580
Calculating significance of each gene.
Using projection method.
11490	PCSK9	1
11491	PCTP	1
11492	PCYOX1	1
11493	PCYOX1L	1
11494	PCYT1A	1
11495	PCYT1B	1
11496	PCYT2	1
11497	PDAP1	1
11498	PDC	1
11499	PDCD1	6.946836e-02
11500	PDCD10	1
11501	PDCD11	5.930260e-01
11502	PDCD1LG2	7.623676e-02
11503	PDCD2	1
11504	PDCD2L	1
11505	PDCD4	1.686969e-01
11506	PDCD5	1
11507	PDCD6	1
11508	PDCD6IP	1
11509	PDCD7	1
11510	PDCL	1
11511	PDCL2	1
11512	PDCL3	1
11513	PDDC1	1
11514	PDE10A	1
11515	PDE11A	1
11516	PDE12	2.667119e-01
11517	PDE1A	1.475462e-01
11518	PDE1B	1
11519	PDE1C	1
In gene PDE2A the following bins exceed PROBCAP:
    THCA-EM-A2CU-TP	categ 6	N = 2206    n = 1	mu =   1.08e-07
11520	PDE2A	1.359476e-01
11521	PDE3A	3.776986e-01
11522	PDE3B	1
11523	PDE4A	1
11524	PDE4B	1
11525	PDE4C	1
11526	PDE4D	1
11527	PDE4DIP	1
11528	PDE5A	1.819525e-01
11529	PDE6A	1
11530	PDE6B	1
11531	PDE6C	1
11532	PDE6D	1
11533	PDE6G	1
11534	PDE6H	1
11535	PDE7A	1
11536	PDE7B	1
11537	PDE8A	1
11538	PDE8B	1
11539	PDE9A	1
11540	PDF	1
11541	PDGFA	1
11542	PDGFB	1
11543	PDGFC	1
11544	PDGFD	1
11545	PDGFRA	1
11546	PDGFRB	2.149099e-01
11547	PDGFRL	1
11548	PDHA1	1
11549	PDHA2	2.546098e-03
11550	PDHB	1
11551	PDHX	1
11552	PDIA2	1
11553	PDIA3	1
11554	PDIA4	1
11555	PDIA5	1
11556	PDIA6	1
11557	PDIK1L	1
11558	PDILT	2.168537e-01
11559	PDK1	1
11560	PDK2	1
11561	PDK3	1.172406e-01
11562	PDK4	1
11563	PDLIM1	1
11564	PDLIM2	1
11565	PDLIM3	1
11566	PDLIM4	1
11567	PDLIM5	1
11568	PDLIM7	1
11569	PDP1	1
11570	PDP2	1
11571	PDPK1	1
11572	PDPN	3.000420e-03
11573	PDPR	2.727452e-01
11574	PDRG1	1
11575	PDS5A	2.764692e-01
11576	PDS5B	3.401836e-01
11577	PDSS1	1
11578	PDSS2	1
11579	PDX1	1
11580	PDXDC1	1
Done

Running MutSig 2:
Scatter job 128: processing genes 11490 - 11580
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PDHA2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.912899e-02	ci left: 3.793287e-01	ci right 3.985361e-01	k: 3889	n:10000
Cons ci ratio: 4.111420e-02	ci left: 4.662695e-01	ci right 4.859444e-01	k: 4761	n:10000
KS ci ratio: 1.151790e-01	ci left: 9.779067e-02	ci right 1.098412e-01	k: 1037	n:10000
PDHA2   10000 perm   2 sec   (5993 perm/sec)   p_kst 1.037000e-01   p_cons 4.761000e-01   p_joint 3.889000e-01

Joint ci ratio: 3.618113e-02	ci left: 3.631039e-01	ci right 3.765340e-01	k: 7396	n:20000
Cons ci ratio: 2.889730e-02	ci left: 4.722050e-01	ci right 4.861011e-01	k: 9583	n:20000
KS ci ratio: 8.333946e-02	ci left: 9.543404e-02	ci right 1.037828e-01	k: 1991	n:20000
PDHA2   20000 perm   6 sec   (3294 perm/sec)   p_kst 9.955000e-02   p_cons 4.791500e-01   p_joint 3.698000e-01

Outputting figure to mutsig2_images.part000000000128/PDHA2.2_1171_20000_0.09955_0.47915_0.3698.png
                gene_name: PDHA2
               theta_stop: 0.083 
                    nperm: 20000 
                     p_ks: 0.100 
        ci_ks_bounds_left: 0.095 
       ci_ks_bounds_right: 0.10 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.49 
                  p_joint: 0.37 
     ci_joint_bounds_left: 0.36 
    ci_joint_bounds_right: 0.38 

Current progress: 50 percent done.
PDPN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.618837e-03	ci left: 9.839328e-01	ci right 9.885776e-01	k: 9864	n:10000
Cons ci ratio: 4.279128e-02	ci left: 4.464018e-01	ci right 4.660237e-01	k: 4562	n:10000
KS ci ratio: 4.710281e-02	ci left: 3.994411e-01	ci right 4.188118e-01	k: 4091	n:10000
PDPN   10000 perm   1 sec   (6914 perm/sec)   p_kst 4.091000e-01   p_cons 4.562000e-01   p_joint 9.864000e-01

Outputting figure to mutsig2_images.part000000000128/PDPN.2_741_10000_0.4091_0.4562_0.9864.png
                gene_name: PDPN
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000128
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 128 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1708>
Subject: Job 8704303: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1708>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000129> was used as the working directory.
Started at Thu Nov 15 19:35:30 2012
Results reported at Thu Nov 15 19:37:45 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000129.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000129.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 129  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000129.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    156.61 sec.
    Max Memory :      5611 MB
    Max Swap   :      8345 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
129
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 129
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 129: processing genes 11581 - 11670
Calculating significance of each gene.
Using projection method.
11581	PDXK	1
11582	PDXP	1
11583	PDYN	1
11584	PDZD11	1.056221e-02
11585	PDZD2	3.612451e-01
11586	PDZD3	1
11587	PDZD4	1
In gene PDZD7 the following bins exceed PROBCAP:
    THCA-DE-A3KN-TP	categ 6	N = 1251    n = 1	mu =   1.00e-07
11588	PDZD7	6.468300e-02
11589	PDZD8	1
11590	PDZD9	1
11591	PDZK1	1
11592	PDZK1IP1	1
11593	PDZRN3	1.722250e-01
11594	PDZRN4	3.341481e-03
11595	PEA15	1
11596	PEAR1	1
11597	PEBP1	1
11598	PEBP4	1
11599	PECAM1	1
11600	PECI	1
11601	PECR	1
11602	PEF1	1
11603	PEG10	1
11604	PEG3	2.372448e-01
11605	PELI1	1
11606	PELI2	1
11607	PELI3	1
11608	PELO	1.893593e-01
11609	PELP1	1
11610	PEMT	1
11611	PENK	1.654562e-02
11612	PEPD	1
11613	PER1	1
11614	PER2	1
11615	PER3	1
11616	PERP	1
11617	PES1	1
11618	PET112L	1
11619	PEX1	2.402016e-01
11620	PEX10	1.369493e-01
11621	PEX11A	1
11622	PEX11B	1
11623	PEX11G	1
11624	PEX12	1
11625	PEX13	1
11626	PEX14	1
11627	PEX16	1
11628	PEX19	1
11629	PEX2	1
11630	PEX26	1
11631	PEX3	1
11632	PEX5	1
11633	PEX5L	1
11634	PEX6	1
11635	PEX7	6.020905e-02
11636	PF4	1
11637	PF4V1	1
11638	PFAS	1
11639	PFDN1	1
11640	PFDN2	1
11641	PFDN4	1
11642	PFDN5	1
11643	PFDN6	1
11644	PFKFB1	1
11645	PFKFB2	1
11646	PFKFB3	1.293299e-01
11647	PFKFB4	1
11648	PFKL	1
11649	PFKM	1
11650	PFKP	3.981863e-02
11651	PFN1	1
11652	PFN2	1
11653	PFN3	1
11654	PFN4	1
11655	PGA3	1
11656	PGA5	1
11657	PGAM1	1
11658	PGAM2	1
11659	PGAM4	1
11660	PGAM5	1
11661	PGAP1	1
11662	PGAP2	1
11663	PGAP3	7.153558e-02
11664	PGBD1	1
11665	PGBD2	2.218678e-01
11666	PGBD3	1
11667	PGBD4	1
11668	PGBD5	1
11669	PGC	1
11670	PGCP	1
Done

Running MutSig 2:
Scatter job 129: processing genes 11581 - 11670
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PDZRN4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.957213e-02	ci left: 4.853532e-01	ci right 5.050496e-01	k: 4952	n:10000
Cons ci ratio: 1.317906e-02	ci left: 8.924146e-01	ci right 9.043522e-01	k: 8985	n:10000
KS ci ratio: 9.093456e-02	ci left: 1.495278e-01	ci right 1.638728e-01	k: 1566	n:10000
PDZRN4   10000 perm   2 sec   (5383 perm/sec)   p_kst 1.566000e-01   p_cons 8.985000e-01   p_joint 4.952000e-01

Outputting figure to mutsig2_images.part000000000129/PDZRN4.3_3224_10000_0.1566_0.8985_0.4952.png
                gene_name: PDZRN4
               theta_stop: 0.091 
                    nperm: 10000 
                     p_ks: 0.16 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 33 percent done.
PDZD2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.823355e-02	ci left: 6.490099e-01	ci right 6.676978e-01	k: 6584	n:10000
Cons ci ratio: 9.262005e-03	ci left: 9.426349e-01	ci right 9.515024e-01	k: 9472	n:10000
KS ci ratio: 5.055356e-02	ci left: 3.658968e-01	ci right 3.849758e-01	k: 3754	n:10000
PDZD2   10000 perm   2 sec   (4193 perm/sec)   p_kst 3.754000e-01   p_cons 9.472000e-01   p_joint 6.584000e-01

Outputting figure to mutsig2_images.part000000000129/PDZD2.2_8616_10000_0.3754_0.9472_0.6584.png
                gene_name: PDZD2
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 0.66 
     ci_joint_bounds_left: 0.65 
    ci_joint_bounds_right: 0.67 

Current progress: 67 percent done.
PFKP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.489344e-02	ci left: 8.672346e-01	ci right 8.803468e-01	k: 8739	n:10000
KS ci ratio: 3.058833e-02	ci left: 6.119096e-01	ci right 6.310196e-01	k: 6215	n:10000
PFKP   10000 perm   2 sec   (5975 perm/sec)   p_kst 6.215000e-01   p_cons 8.739000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000129/PFKP.2_2443_10000_0.6215_0.8739_1.png
                gene_name: PFKP
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.62 
        ci_ks_bounds_left: 0.61 
       ci_ks_bounds_right: 0.63 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.88 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000129
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 129 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1530>
Subject: Job 8704305: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1530>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000130> was used as the working directory.
Started at Thu Nov 15 19:35:40 2012
Results reported at Thu Nov 15 19:38:49 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000130.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000130.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 130  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000130.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    268.52 sec.
    Max Memory :      5905 MB
    Max Swap   :      8421 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
130
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 130
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 130: processing genes 11671 - 11760
Calculating significance of each gene.
Using projection method.
11671	PGD	1
11672	PGF	1
11673	PGGT1B	1
11674	PGK1	1
11675	PGK2	1
11676	PGLS	1
11677	PGLYRP1	1
11678	PGLYRP2	1
11679	PGLYRP3	1
11680	PGLYRP4	1
11681	PGM1	1
11682	PGM2	1.822799e-02
11683	PGM2L1	1
11684	PGM3	1
11685	PGM5	1.904107e-03
11686	PGP	1
11687	PGPEP1	1
11688	PGPEP1L	1
11689	PGR	1
11690	PGRMC1	1
11691	PGRMC2	1
11692	PGS1	1
11693	PHACTR1	1
11694	PHACTR2	1.391034e-01
11695	PHACTR3	1
11696	PHACTR4	1
11697	PHAX	1
11698	PHB	1
11699	PHB2	1
11700	PHC1	1.484344e-01
11701	PHC2	1
11702	PHC3	1
11703	PHEX	1.224585e-01
11704	PHF1	1
11705	PHF10	1
11706	PHF11	1
11707	PHF12	1
11708	PHF13	1
In gene PHF14 the following bins exceed PROBCAP:
    THCA-EM-A3FJ-TP	categ 6	N = 1014    n = 1	mu =   7.09e-08
11709	PHF14	4.596123e-02
11710	PHF15	1
11711	PHF16	1
11712	PHF17	1
11713	PHF19	1
11714	PHF2	1
11715	PHF20	1
11716	PHF20L1	1
11717	PHF21A	1.967363e-01
11718	PHF21B	1
11719	PHF23	1.591672e-01
11720	PHF3	2.853619e-01
11721	PHF5A	1
11722	PHF6	6.280250e-02
11723	PHF7	1
In gene PHF8 the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 3067    n = 1	mu =   1.35e-07
11724	PHF8	2.193203e-01
11725	PHGDH	8.262017e-02
11726	PHIP	2.231953e-01
11727	PHKA1	1
In gene PHKA2 the following bins exceed PROBCAP:
    THCA-DJ-A2QB-TP	categ 6	N = 3669    n = 1	mu =   1.44e-07
11728	PHKA2	1.126442e-01
11729	PHKB	1
11730	PHKG1	1
11731	PHKG2	1
11732	PHLDA1	1
11733	PHLDA2	1
11734	PHLDA3	1
11735	PHLDB1	3.244774e-01
In gene PHLDB2 the following bins exceed PROBCAP:
    THCA-ET-A2N4-TP	categ 5	N = 3782    n = 1	mu =   2.14e-07
11736	PHLDB2	3.619064e-01
11737	PHLDB3	1
11738	PHLPP1	1
11739	PHLPP2	3.022923e-01
11740	PHOSPHO2	1
11741	PHOX2A	5.311383e-02
11742	PHOX2B	1
11743	PHPT1	1
11744	PHRF1	5.135166e-01
11745	PHTF1	1
11746	PHTF2	1
11747	PHYH	1
11748	PHYHD1	1
11749	PHYHIP	1
11750	PHYHIPL	1
11751	PI15	1
11752	PI16	1
11753	PI3	1
11754	PI4K2A	1
11755	PI4K2B	1.378124e-01
11756	PI4KA	1
11757	PI4KB	2.756407e-01
11758	PIAS1	1
11759	PIAS2	9.114606e-02
11760	PIAS3	9.542805e-02
Done

Running MutSig 2:
Scatter job 130: processing genes 11671 - 11760
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PGM2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.795366e-03	ci left: 9.756767e-01	ci right 9.814398e-01	k: 9787	n:10000
KS ci ratio: 2.535597e-02	ci left: 6.959529e-01	ci right 7.139275e-01	k: 7050	n:10000
PGM2   10000 perm   2 sec   (5674 perm/sec)   p_kst 7.050000e-01   p_cons 9.787000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000130/PGM2.2_1895_10000_0.705_0.9787_1.png
                gene_name: PGM2
               theta_stop: 0.025 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.70 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
PGM5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.541090e-02	ci left: 4.171780e-01	ci right 4.366646e-01	k: 4269	n:10000
Cons ci ratio: 1.080128e-02	ci left: 9.243065e-01	ci right 9.344416e-01	k: 9295	n:10000
KS ci ratio: 6.219546e-02	ci left: 2.753738e-01	ci right 2.931520e-01	k: 2842	n:10000
PGM5   10000 perm   2 sec   (6324 perm/sec)   p_kst 2.842000e-01   p_cons 9.295000e-01   p_joint 4.269000e-01

Outputting figure to mutsig2_images.part000000000130/PGM5.2_1748_10000_0.2842_0.9295_0.4269.png
                gene_name: PGM5
               theta_stop: 0.062 
                    nperm: 10000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.29 
                   p_cons: 0.93 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.93 
                  p_joint: 0.43 
     ci_joint_bounds_left: 0.42 
    ci_joint_bounds_right: 0.44 

Current progress: 67 percent done.
PHKA2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.462208e-02	ci left: 8.713228e-01	ci right 8.842562e-01	k: 8779	n:10000
Cons ci ratio: 1.748396e-02	ci left: 8.266621e-01	ci right 8.413428e-01	k: 8341	n:10000
KS ci ratio: 2.113385e-02	ci left: 7.664836e-01	ci right 7.829561e-01	k: 7748	n:10000
PHKA2   10000 perm   2 sec   (5066 perm/sec)   p_kst 7.748000e-01   p_cons 8.341000e-01   p_joint 8.779000e-01

Outputting figure to mutsig2_images.part000000000130/PHKA2.2_3840_10000_0.7748_0.8341_0.8779.png
                gene_name: PHKA2
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.84 
                  p_joint: 0.88 
     ci_joint_bounds_left: 0.87 
    ci_joint_bounds_right: 0.88 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000130
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 130 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1700>
Subject: Job 8704306: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1700>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000131> was used as the working directory.
Started at Thu Nov 15 19:35:40 2012
Results reported at Thu Nov 15 19:42:52 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000131.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000131.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 131  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000131.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    467.93 sec.
    Max Memory :      5700 MB
    Max Swap   :      8458 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
131
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 131
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 131: processing genes 11761 - 11851
Calculating significance of each gene.
Using projection method.
11761	PIAS4	1
In gene PIBF1 the following bins exceed PROBCAP:
    THCA-DJ-A2PN-TP	categ 5	N = 2342    n = 1	mu =   1.05e-07
11762	PIBF1	3.604514e-02
11763	PICALM	1
11764	PICK1	1
11765	PID1	1
11766	PIF1	1
11767	PIGA	1
11768	PIGB	1
11769	PIGC	1
11770	PIGF	1
11771	PIGG	1
11772	PIGH	1
11773	PIGK	1
11774	PIGL	1
11775	PIGM	1
11776	PIGN	1
11777	PIGO	3.857142e-01
11778	PIGP	1
11779	PIGQ	1
11780	PIGR	1
11781	PIGS	8.059347e-02
11782	PIGT	1
11783	PIGU	1
11784	PIGV	1
11785	PIGW	1
11786	PIGX	1
11787	PIGY	1
11788	PIGZ	1.042926e-01
11789	PIH1D1	1
11790	PIH1D2	7.688486e-02
11791	PIK3AP1	1.743366e-01
11792	PIK3C2A	4.720025e-01
11793	PIK3C2B	1
11794	PIK3C2G	3.138998e-01
11795	PIK3C3	1
11796	PIK3CA	1.261635e-02
11797	PIK3CB	2.379669e-01
11798	PIK3CD	1
11799	PIK3CG	3.391398e-01
11800	PIK3IP1	1
11801	PIK3R1	1.733859e-01
11802	PIK3R2	1
11803	PIK3R3	1
11804	PIK3R4	1
11805	PIK3R5	2.873692e-03
11806	PIK3R6	1
11807	PIKFYVE	1
11808	PILRA	1
11809	PILRB	1
11810	PIM1	1
11811	PIM2	1
11812	PIM3	1
11813	PIN1	1
11814	PIN4	1
11815	PINK1	1
11816	PINX1	1
11817	PION	1
11818	PIP	1
11819	PIP4K2A	1
11820	PIP4K2B	2.030944e-01
11821	PIP4K2C	1.338933e-01
11822	PIP5K1A	1.641820e-01
11823	PIP5K1B	1
11824	PIP5K1C	1
11825	PIP5KL1	1
11826	PIPOX	1
11827	PIR	3.719751e-02
11828	PIRT	1
11829	PISD	1
11830	PITPNA	4.645828e-02
11831	PITPNB	1
11832	PITPNC1	1
11833	PITPNM1	4.529416e-01
11834	PITPNM2	1
11835	PITPNM3	1.586617e-01
11836	PITRM1	1
11837	PITX1	1
11838	PITX2	1.409326e-01
11839	PITX3	1
11840	PIWIL1	1
11841	PIWIL2	2.078705e-01
11842	PIWIL3	1
11843	PIWIL4	1
11844	PJA1	1
11845	PJA2	1
11846	PKD1	6.585766e-01
11847	PKD1L1	4.179274e-01
11848	PKD1L2	1
11849	PKD2	1
11850	PKD2L1	1
11851	PKD2L2	1
Done

Running MutSig 2:
Scatter job 131: processing genes 11761 - 11851
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PIK3CA
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.657053e-01	ci left: 1.846678e-02	ci right 2.421679e-02	k: 212	n:10000
Cons ci ratio: 4.337666e-01	ci left: 6.348452e-03	ci right 9.946939e-03	k: 80	n:10000
KS ci ratio: 4.583094e-02	ci left: 4.126927e-01	ci right 4.321525e-01	k: 4224	n:10000
PIK3CA   10000 perm   2 sec   (5228 perm/sec)   p_kst 4.224000e-01   p_cons 8.000000e-03   p_joint 2.120000e-02

Joint ci ratio: 2.382876e-01	ci left: 1.175842e-02	ci right 1.498535e-02	k: 266	n:20000
Cons ci ratio: 3.426791e-01	ci left: 5.387780e-03	ci right 7.659273e-03	k: 129	n:20000
KS ci ratio: 3.264721e-02	ci left: 4.119996e-01	ci right 4.257240e-01	k: 8377	n:20000
PIK3CA   20000 perm   6 sec   (3256 perm/sec)   p_kst 4.188500e-01   p_cons 6.450000e-03   p_joint 1.330000e-02

Joint ci ratio: 1.221288e-01	ci left: 3.116896e-02	ci right 3.525542e-02	k: 995	n:30000
Cons ci ratio: 2.819903e-01	ci left: 5.498039e-03	ci right 7.332854e-03	k: 191	n:30000
KS ci ratio: 2.561753e-02	ci left: 4.327081e-01	ci right 4.439705e-01	k: 13150	n:30000
PIK3CA   30000 perm   9 sec   (3520 perm/sec)   p_kst 4.383333e-01   p_cons 6.366667e-03   p_joint 3.316667e-02

Joint ci ratio: 1.119792e-01	ci left: 2.805811e-02	ci right 3.141062e-02	k: 1188	n:40000
Cons ci ratio: 2.456646e-01	ci left: 5.548131e-03	ci right 7.124827e-03	k: 252	n:40000
KS ci ratio: 2.210073e-02	ci left: 4.353522e-01	ci right 4.451065e-01	k: 17609	n:40000
PIK3CA   40000 perm   11 sec   (3655 perm/sec)   p_kst 4.402250e-01   p_cons 6.300000e-03   p_joint 2.970000e-02

Joint ci ratio: 1.040943e-01	ci left: 2.614254e-02	ci right 2.903266e-02	k: 1378	n:50000
Cons ci ratio: 3.273345e-01	ci left: 2.392621e-03	ci right 3.346552e-03	k: 142	n:50000
KS ci ratio: 1.982733e-02	ci left: 4.343841e-01	ci right 4.431030e-01	k: 21937	n:50000
PIK3CA   50000 perm   13 sec   (3721 perm/sec)   p_kst 4.387400e-01   p_cons 2.840000e-03   p_joint 2.756000e-02

Joint ci ratio: 8.442704e-02	ci left: 3.321713e-02	ci right 3.616144e-02	k: 2080	n:60000
Cons ci ratio: 3.011110e-01	ci left: 2.393067e-03	ci right 3.256140e-03	k: 168	n:60000
KS ci ratio: 1.813080e-02	ci left: 4.339250e-01	ci right 4.418810e-01	k: 26274	n:60000
PIK3CA   60000 perm   16 sec   (3751 perm/sec)   p_kst 4.379000e-01   p_cons 2.800000e-03   p_joint 3.466667e-02

Joint ci ratio: 8.491728e-02	ci left: 2.828692e-02	ci right 3.080942e-02	k: 2067	n:70000
Cons ci ratio: 2.862736e-01	ci left: 2.289392e-03	ci right 3.067032e-03	k: 186	n:70000
KS ci ratio: 1.680543e-02	ci left: 4.336493e-01	ci right 4.410130e-01	k: 30613	n:70000
PIK3CA   70000 perm   19 sec   (3759 perm/sec)   p_kst 4.373286e-01   p_cons 2.657143e-03   p_joint 2.952857e-02

Joint ci ratio: 7.982404e-02	ci left: 2.809318e-02	ci right 3.044113e-02	k: 2340	n:80000
Cons ci ratio: 2.669806e-01	ci left: 2.328974e-03	ci right 3.057836e-03	k: 214	n:80000
KS ci ratio: 1.568791e-02	ci left: 4.348952e-01	ci right 4.417842e-01	k: 35067	n:80000
PIK3CA   80000 perm   21 sec   (3750 perm/sec)   p_kst 4.383375e-01   p_cons 2.675000e-03   p_joint 2.925000e-02

Joint ci ratio: 9.932772e-02	ci left: 1.616548e-02	ci right 1.786585e-02	k: 1530	n:90000
Cons ci ratio: 2.521697e-01	ci left: 2.340307e-03	ci right 3.025707e-03	k: 240	n:90000
KS ci ratio: 1.481625e-02	ci left: 4.342444e-01	ci right 4.407374e-01	k: 39374	n:90000
PIK3CA   90000 perm   24 sec   (3728 perm/sec)   p_kst 4.374889e-01   p_cons 2.666667e-03   p_joint 1.700000e-02

Joint ci ratio: 8.469988e-02	ci left: 2.008106e-02	ci right 2.186688e-02	k: 2096	n:100000
Cons ci ratio: 2.446850e-01	ci left: 2.246925e-03	ci right 2.882476e-03	k: 255	n:100000
KS ci ratio: 1.404137e-02	ci left: 4.349218e-01	ci right 4.410818e-01	k: 43800	n:100000
PIK3CA   100000 perm   27 sec   (3704 perm/sec)   p_kst 4.380000e-01   p_cons 2.550000e-03   p_joint 2.096000e-02

Joint ci ratio: 6.775914e-02	ci left: 2.852585e-02	ci right 3.053542e-02	k: 3247	n:110000
Cons ci ratio: 2.360882e-01	ci left: 2.204979e-03	ci right 2.803551e-03	k: 274	n:110000
KS ci ratio: 1.337831e-02	ci left: 4.354194e-01	ci right 4.412929e-01	k: 48219	n:110000
PIK3CA   110000 perm   30 sec   (3674 perm/sec)   p_kst 4.383545e-01   p_cons 2.490909e-03   p_joint 2.951818e-02

Joint ci ratio: 8.189921e-02	ci left: 1.796554e-02	ci right 1.950785e-02	k: 2247	n:120000
Cons ci ratio: 2.275632e-01	ci left: 2.186068e-03	ci right 2.755069e-03	k: 295	n:120000
KS ci ratio: 1.282538e-02	ci left: 4.349071e-01	ci right 4.405292e-01	k: 52526	n:120000
PIK3CA   120000 perm   33 sec   (3642 perm/sec)   p_kst 4.377167e-01   p_cons 2.458333e-03   p_joint 1.872500e-02

Joint ci ratio: 8.632147e-02	ci left: 1.494087e-02	ci right 1.629625e-02	k: 2029	n:130000
Cons ci ratio: 2.181815e-01	ci left: 2.206750e-03	ci right 2.754281e-03	k: 321	n:130000
KS ci ratio: 1.231900e-02	ci left: 4.351468e-01	ci right 4.405483e-01	k: 56920	n:130000
PIK3CA   130000 perm   36 sec   (3605 perm/sec)   p_kst 4.378462e-01   p_cons 2.469231e-03   p_joint 1.560769e-02

Joint ci ratio: 7.733515e-02	ci left: 1.732401e-02	ci right 1.872462e-02	k: 2522	n:140000
Cons ci ratio: 2.110917e-01	ci left: 2.197821e-03	ci right 2.723125e-03	k: 343	n:140000
KS ci ratio: 1.186908e-02	ci left: 4.353203e-01	ci right 4.405251e-01	k: 61309	n:140000
PIK3CA   140000 perm   39 sec   (3569 perm/sec)   p_kst 4.379214e-01   p_cons 2.450000e-03   p_joint 1.801429e-02

Joint ci ratio: 6.344254e-02	ci left: 2.403199e-02	ci right 2.561312e-02	k: 3722	n:150000
Cons ci ratio: 2.038152e-01	ci left: 2.209311e-03	ci right 2.716893e-03	k: 368	n:150000
KS ci ratio: 1.147723e-02	ci left: 4.349541e-01	ci right 4.399816e-01	k: 65620	n:150000
PIK3CA   150000 perm   42 sec   (3532 perm/sec)   p_kst 4.374667e-01   p_cons 2.453333e-03   p_joint 2.481333e-02

Joint ci ratio: 7.030003e-02	ci left: 1.839192e-02	ci right 1.973809e-02	k: 3049	n:160000
Cons ci ratio: 1.974942e-01	ci left: 2.213695e-03	ci right 2.704612e-03	k: 392	n:160000
KS ci ratio: 1.110780e-02	ci left: 4.352547e-01	ci right 4.401226e-01	k: 70030	n:160000
PIK3CA   160000 perm   46 sec   (3496 perm/sec)   p_kst 4.376875e-01   p_cons 2.450000e-03   p_joint 1.905625e-02

Joint ci ratio: 6.840172e-02	ci left: 1.830423e-02	ci right 1.960636e-02	k: 3221	n:170000
Cons ci ratio: 1.921897e-01	ci left: 2.206576e-03	ci right 2.681235e-03	k: 414	n:170000
KS ci ratio: 1.077086e-02	ci left: 4.355691e-01	ci right 4.402918e-01	k: 74448	n:170000
PIK3CA   170000 perm   49 sec   (3458 perm/sec)   p_kst 4.379294e-01   p_cons 2.435294e-03   p_joint 1.894706e-02

Joint ci ratio: 6.567957e-02	ci left: 1.876780e-02	ci right 2.004775e-02	k: 3492	n:180000
Cons ci ratio: 1.866496e-01	ci left: 2.216293e-03	ci right 2.677743e-03	k: 439	n:180000
KS ci ratio: 1.046720e-02	ci left: 4.356451e-01	ci right 4.402346e-01	k: 78829	n:180000
PIK3CA   180000 perm   53 sec   (3420 perm/sec)   p_kst 4.379389e-01   p_cons 2.438889e-03   p_joint 1.940000e-02

Joint ci ratio: 6.587728e-02	ci left: 1.769169e-02	ci right 1.890202e-02	k: 3475	n:190000
Cons ci ratio: 1.815626e-01	ci left: 2.225163e-03	ci right 2.674444e-03	k: 464	n:190000
KS ci ratio: 1.020214e-02	ci left: 4.350258e-01	ci right 4.394919e-01	k: 83079	n:190000
PIK3CA   190000 perm   56 sec   (3382 perm/sec)   p_kst 4.372579e-01   p_cons 2.442105e-03   p_joint 1.828947e-02

Joint ci ratio: 6.463290e-02	ci left: 1.747595e-02	ci right 1.864808e-02	k: 3611	n:200000
Cons ci ratio: 1.770512e-01	ci left: 2.228519e-03	ci right 2.666101e-03	k: 488	n:200000
KS ci ratio: 9.941350e-03	ci left: 4.352044e-01	ci right 4.395574e-01	k: 87476	n:200000
PIK3CA   200000 perm   60 sec   (3345 perm/sec)   p_kst 4.373800e-01   p_cons 2.440000e-03   p_joint 1.805500e-02

Joint ci ratio: 6.644288e-02	ci left: 1.576272e-02	ci right 1.685069e-02	k: 3423	n:210000
Cons ci ratio: 1.720220e-01	ci left: 2.254465e-03	ci right 2.683262e-03	k: 517	n:210000
KS ci ratio: 9.706257e-03	ci left: 4.350293e-01	ci right 4.392772e-01	k: 91802	n:210000
PIK3CA   210000 perm   64 sec   (3307 perm/sec)   p_kst 4.371524e-01   p_cons 2.461905e-03   p_joint 1.630000e-02

Joint ci ratio: 6.516547e-02	ci left: 1.565421e-02	ci right 1.671313e-02	k: 3559	n:220000
Cons ci ratio: 1.681705e-01	ci left: 2.256437e-03	ci right 2.675026e-03	k: 541	n:220000
KS ci ratio: 9.484721e-03	ci left: 4.349940e-01	ci right 4.391440e-01	k: 96155	n:220000
PIK3CA   220000 perm   67 sec   (3269 perm/sec)   p_kst 4.370682e-01   p_cons 2.459091e-03   p_joint 1.617727e-02

Joint ci ratio: 6.418880e-02	ci left: 1.544407e-02	ci right 1.647253e-02	k: 3669	n:230000
Cons ci ratio: 1.638428e-01	ci left: 2.279182e-03	ci right 2.690038e-03	k: 570	n:230000
KS ci ratio: 9.270892e-03	ci left: 4.353235e-01	ci right 4.393824e-01	k: 100591	n:230000
PIK3CA   230000 perm   71 sec   (3231 perm/sec)   p_kst 4.373522e-01   p_cons 2.478261e-03   p_joint 1.595217e-02

Joint ci ratio: 6.122103e-02	ci left: 1.628137e-02	ci right 1.731368e-02	k: 4030	n:240000
Cons ci ratio: 1.614596e-01	ci left: 2.252164e-03	ci right 2.651671e-03	k: 587	n:240000
KS ci ratio: 9.074584e-03	ci left: 4.354265e-01	ci right 4.394000e-01	k: 104979	n:240000
PIK3CA   240000 perm   75 sec   (3194 perm/sec)   p_kst 4.374125e-01   p_cons 2.445833e-03   p_joint 1.679167e-02

Joint ci ratio: 4.988104e-02	ci left: 2.350631e-02	ci right 2.471275e-02	k: 6026	n:250000
Cons ci ratio: 1.586525e-01	ci left: 2.242712e-03	ci right 2.632967e-03	k: 608	n:250000
KS ci ratio: 8.892119e-03	ci left: 4.354182e-01	ci right 4.393112e-01	k: 109341	n:250000
PIK3CA   250000 perm   79 sec   (3158 perm/sec)   p_kst 4.373640e-01   p_cons 2.432000e-03   p_joint 2.410400e-02

Joint ci ratio: 4.742570e-02	ci left: 2.499628e-02	ci right 2.621432e-02	k: 6656	n:260000
Cons ci ratio: 1.556159e-01	ci left: 2.245132e-03	ci right 2.627633e-03	k: 632	n:260000
KS ci ratio: 8.719963e-03	ci left: 4.354267e-01	ci right 4.392440e-01	k: 113707	n:260000
PIK3CA   260000 perm   83 sec   (3122 perm/sec)   p_kst 4.373346e-01   p_cons 2.430769e-03   p_joint 2.560000e-02

Joint ci ratio: 4.497770e-02	ci left: 2.674717e-02	ci right 2.798152e-02	k: 7387	n:270000
Cons ci ratio: 1.530981e-01	ci left: 2.236752e-03	ci right 2.611094e-03	k: 653	n:270000
KS ci ratio: 8.556403e-03	ci left: 4.354944e-01	ci right 4.392403e-01	k: 118089	n:270000
PIK3CA   270000 perm   87 sec   (3087 perm/sec)   p_kst 4.373667e-01   p_cons 2.418519e-03   p_joint 2.735926e-02

Joint ci ratio: 4.397765e-02	ci left: 2.698571e-02	ci right 2.820267e-02	k: 7725	n:280000
Cons ci ratio: 1.502530e-01	ci left: 2.242765e-03	ci right 2.610512e-03	k: 678	n:280000
KS ci ratio: 8.405130e-03	ci left: 4.353580e-01	ci right 4.390362e-01	k: 122415	n:280000
PIK3CA   280000 perm   92 sec   (3052 perm/sec)   p_kst 4.371964e-01   p_cons 2.421429e-03   p_joint 2.758929e-02

Joint ci ratio: 4.343637e-02	ci left: 2.672356e-02	ci right 2.791350e-02	k: 7921	n:290000
Cons ci ratio: 1.478771e-01	ci left: 2.238461e-03	ci right 2.599184e-03	k: 700	n:290000
KS ci ratio: 8.256165e-03	ci left: 4.355555e-01	ci right 4.391699e-01	k: 126835	n:290000
PIK3CA   290000 perm   96 sec   (3019 perm/sec)   p_kst 4.373621e-01   p_cons 2.413793e-03   p_joint 2.731379e-02

Joint ci ratio: 4.264794e-02	ci left: 2.680555e-02	ci right 2.797694e-02	k: 8216	n:300000
Cons ci ratio: 1.445125e-01	ci left: 2.269825e-03	ci right 2.626562e-03	k: 733	n:300000
KS ci ratio: 8.117762e-03	ci left: 4.355639e-01	ci right 4.391174e-01	k: 131202	n:300000
PIK3CA   300000 perm   100 sec   (2986 perm/sec)   p_kst 4.373400e-01   p_cons 2.443333e-03   p_joint 2.738667e-02

Joint ci ratio: 4.170238e-02	ci left: 2.713468e-02	ci right 2.829353e-02	k: 8590	n:310000
Cons ci ratio: 1.424893e-01	ci left: 2.261914e-03	ci right 2.612008e-03	k: 754	n:310000
KS ci ratio: 7.988188e-03	ci left: 4.354431e-01	ci right 4.389387e-01	k: 135529	n:310000
PIK3CA   310000 perm   105 sec   (2954 perm/sec)   p_kst 4.371903e-01   p_cons 2.432258e-03   p_joint 2.770968e-02

Joint ci ratio: 4.110077e-02	ci left: 2.707223e-02	ci right 2.821134e-02	k: 8844	n:320000
Cons ci ratio: 1.407308e-01	ci left: 2.248499e-03	ci right 2.591861e-03	k: 773	n:320000
KS ci ratio: 7.864076e-03	ci left: 4.353648e-01	ci right 4.388051e-01	k: 139867	n:320000
PIK3CA   320000 perm   110 sec   (2922 perm/sec)   p_kst 4.370844e-01   p_cons 2.415625e-03   p_joint 2.763750e-02

Joint ci ratio: 4.320115e-02	ci left: 2.381629e-02	ci right 2.487087e-02	k: 8032	n:330000
Cons ci ratio: 1.382515e-01	ci left: 2.262251e-03	ci right 2.601126e-03	k: 801	n:330000
KS ci ratio: 7.744525e-03	ci left: 4.353582e-01	ci right 4.387459e-01	k: 144227	n:330000
PIK3CA   330000 perm   114 sec   (2891 perm/sec)   p_kst 4.370515e-01   p_cons 2.427273e-03   p_joint 2.433939e-02

Joint ci ratio: 4.323078e-02	ci left: 2.310108e-02	ci right 2.412471e-02	k: 8027	n:340000
Cons ci ratio: 1.361457e-01	ci left: 2.266720e-03	ci right 2.600674e-03	k: 826	n:340000
KS ci ratio: 7.632182e-03	ci left: 4.352289e-01	ci right 4.385663e-01	k: 148545	n:340000
PIK3CA   340000 perm   119 sec   (2862 perm/sec)   p_kst 4.368971e-01   p_cons 2.429412e-03   p_joint 2.360882e-02

Joint ci ratio: 4.261167e-02	ci left: 2.310527e-02	ci right 2.411407e-02	k: 8262	n:350000
Cons ci ratio: 1.346092e-01	ci left: 2.254403e-03	ci right 2.582493e-03	k: 845	n:350000
KS ci ratio: 7.524064e-03	ci left: 4.351416e-01	ci right 4.384308e-01	k: 152875	n:350000
PIK3CA   350000 perm   124 sec   (2832 perm/sec)   p_kst 4.367857e-01   p_cons 2.414286e-03   p_joint 2.360571e-02

Joint ci ratio: 4.253650e-02	ci left: 2.255676e-02	ci right 2.353983e-02	k: 8296	n:360000
Cons ci ratio: 1.330465e-01	ci left: 2.245476e-03	ci right 2.568173e-03	k: 865	n:360000
KS ci ratio: 7.417440e-03	ci left: 4.352567e-01	ci right 4.384999e-01	k: 157276	n:360000
PIK3CA   360000 perm   129 sec   (2802 perm/sec)   p_kst 4.368778e-01   p_cons 2.402778e-03   p_joint 2.304444e-02

Joint ci ratio: 4.422574e-02	ci left: 2.033186e-02	ci right 2.125404e-02	k: 7692	n:370000
Cons ci ratio: 1.311665e-01	ci left: 2.250122e-03	ci right 2.568562e-03	k: 890	n:370000
KS ci ratio: 7.312613e-03	ci left: 4.355414e-01	ci right 4.387407e-01	k: 161742	n:370000
PIK3CA   370000 perm   133 sec   (2773 perm/sec)   p_kst 4.371405e-01   p_cons 2.405405e-03   p_joint 2.078919e-02

Joint ci ratio: 4.159183e-02	ci left: 2.236681e-02	ci right 2.331943e-02	k: 8679	n:380000
Cons ci ratio: 1.291522e-01	ci left: 2.262194e-03	ci right 2.577049e-03	k: 918	n:380000
KS ci ratio: 7.214535e-03	ci left: 4.356457e-01	ci right 4.388026e-01	k: 166145	n:380000
PIK3CA   380000 perm   138 sec   (2746 perm/sec)   p_kst 4.372237e-01   p_cons 2.415789e-03   p_joint 2.283947e-02

Joint ci ratio: 4.131555e-02	ci left: 2.209520e-02	ci right 2.302986e-02	k: 8798	n:390000
Cons ci ratio: 1.275660e-01	ci left: 2.261270e-03	ci right 2.571838e-03	k: 941	n:390000
KS ci ratio: 7.152405e-03	ci left: 4.335330e-01	ci right 4.366475e-01	k: 169685	n:390000
PIK3CA   390000 perm   143 sec   (2718 perm/sec)   p_kst 4.350897e-01   p_cons 2.412821e-03   p_joint 2.255897e-02

Joint ci ratio: 4.003453e-02	ci left: 2.293868e-02	ci right 2.387824e-02	k: 9362	n:400000
Cons ci ratio: 1.263654e-01	ci left: 2.248308e-03	ci right 2.553972e-03	k: 959	n:400000
KS ci ratio: 7.061462e-03	ci left: 4.336203e-01	ci right 4.366956e-01	k: 174063	n:400000
PIK3CA   400000 perm   149 sec   (2691 perm/sec)   p_kst 4.351575e-01   p_cons 2.397500e-03   p_joint 2.340500e-02

Joint ci ratio: 3.776036e-02	ci left: 2.512836e-02	ci right 2.609787e-02	k: 10500	n:410000
Cons ci ratio: 1.248148e-01	ci left: 2.250169e-03	ci right 2.552054e-03	k: 983	n:410000
KS ci ratio: 6.976600e-03	ci left: 4.335135e-01	ci right 4.365509e-01	k: 178363	n:410000
PIK3CA   410000 perm   154 sec   (2664 perm/sec)   p_kst 4.350317e-01   p_cons 2.397561e-03   p_joint 2.560976e-02

Joint ci ratio: 3.752551e-02	ci left: 2.484840e-02	ci right 2.580102e-02	k: 10635	n:420000
Cons ci ratio: 1.236896e-01	ci left: 2.238117e-03	ci right 2.535481e-03	k: 1001	n:420000
KS ci ratio: 6.892923e-03	ci left: 4.335404e-01	ci right 4.365414e-01	k: 182717	n:420000
PIK3CA   420000 perm   159 sec   (2638 perm/sec)   p_kst 4.350405e-01   p_cons 2.383333e-03   p_joint 2.532143e-02

Joint ci ratio: 3.706432e-02	ci left: 2.488337e-02	ci right 2.582536e-02	k: 10901	n:430000
Cons ci ratio: 1.226544e-01	ci left: 2.224384e-03	ci right 2.517270e-03	k: 1018	n:430000
KS ci ratio: 6.813475e-03	ci left: 4.334733e-01	ci right 4.364392e-01	k: 187031	n:430000
PIK3CA   430000 perm   165 sec   (2611 perm/sec)   p_kst 4.349558e-01   p_cons 2.367442e-03   p_joint 2.535116e-02

Joint ci ratio: 3.866499e-02	ci left: 2.238573e-02	ci right 2.327057e-02	k: 10043	n:440000
Cons ci ratio: 1.215861e-01	ci left: 2.213488e-03	ci right 2.502218e-03	k: 1036	n:440000
KS ci ratio: 6.733225e-03	ci left: 4.336639e-01	ci right 4.365960e-01	k: 191457	n:440000
PIK3CA   440000 perm   170 sec   (2585 perm/sec)   p_kst 4.351295e-01   p_cons 2.354545e-03   p_joint 2.282500e-02

Joint ci ratio: 3.582592e-02	ci left: 2.545108e-02	ci right 2.638170e-02	k: 11661	n:450000
Cons ci ratio: 1.198075e-01	ci left: 2.231110e-03	ci right 2.517580e-03	k: 1067	n:450000
KS ci ratio: 6.657429e-03	ci left: 4.337219e-01	ci right 4.366212e-01	k: 195827	n:450000
PIK3CA   450000 perm   176 sec   (2560 perm/sec)   p_kst 4.351711e-01   p_cons 2.371111e-03   p_joint 2.591333e-02

Joint ci ratio: 3.540261e-02	ci left: 2.550108e-02	ci right 2.642229e-02	k: 11941	n:460000
Cons ci ratio: 1.181047e-01	ci left: 2.247995e-03	ci right 2.532244e-03	k: 1098	n:460000
KS ci ratio: 6.585301e-03	ci left: 4.336905e-01	ci right 4.365581e-01	k: 200157	n:460000
PIK3CA   460000 perm   181 sec   (2536 perm/sec)   p_kst 4.351239e-01   p_cons 2.386957e-03   p_joint 2.595870e-02

Joint ci ratio: 3.494848e-02	ci left: 2.561441e-02	ci right 2.652761e-02	k: 12252	n:470000
Cons ci ratio: 1.167838e-01	ci left: 2.251794e-03	ci right 2.533120e-03	k: 1123	n:470000
KS ci ratio: 6.512507e-03	ci left: 4.338840e-01	ci right 4.367210e-01	k: 204592	n:470000
PIK3CA   470000 perm   187 sec   (2512 perm/sec)   p_kst 4.353021e-01   p_cons 2.389362e-03   p_joint 2.606809e-02

Joint ci ratio: 3.457358e-02	ci left: 2.563220e-02	ci right 2.653603e-02	k: 12519	n:480000
Cons ci ratio: 1.154055e-01	ci left: 2.259499e-03	ci right 2.538228e-03	k: 1150	n:480000
KS ci ratio: 6.446743e-03	ci left: 4.337135e-01	ci right 4.365206e-01	k: 208856	n:480000
PIK3CA   480000 perm   193 sec   (2488 perm/sec)   p_kst 4.351167e-01   p_cons 2.395833e-03   p_joint 2.608125e-02

Joint ci ratio: 3.419403e-02	ci left: 2.567359e-02	ci right 2.656876e-02	k: 12798	n:490000
Cons ci ratio: 1.141235e-01	ci left: 2.264925e-03	ci right 2.541011e-03	k: 1176	n:490000
KS ci ratio: 6.379858e-03	ci left: 4.337867e-01	ci right 4.365651e-01	k: 213236	n:490000
PIK3CA   490000 perm   199 sec   (2466 perm/sec)   p_kst 4.351755e-01   p_cons 2.400000e-03   p_joint 2.611837e-02

Joint ci ratio: 3.396429e-02	ci left: 2.550909e-02	ci right 2.639242e-02	k: 12974	n:500000
Cons ci ratio: 1.134042e-01	ci left: 2.248772e-03	ci right 2.521046e-03	k: 1191	n:500000
KS ci ratio: 6.315192e-03	ci left: 4.338432e-01	ci right 4.365936e-01	k: 217609	n:500000
PIK3CA   500000 perm   205 sec   (2443 perm/sec)   p_kst 4.352180e-01   p_cons 2.382000e-03   p_joint 2.594800e-02

Joint ci ratio: 3.361337e-02	ci left: 2.553774e-02	ci right 2.641275e-02	k: 13246	n:510000
Cons ci ratio: 1.119570e-01	ci left: 2.263750e-03	ci right 2.534109e-03	k: 1222	n:510000
KS ci ratio: 6.251256e-03	ci left: 4.339916e-01	ci right 4.367150e-01	k: 222030	n:510000
PIK3CA   510000 perm   211 sec   (2420 perm/sec)   p_kst 4.353529e-01   p_cons 2.396078e-03   p_joint 2.597255e-02

Joint ci ratio: 3.328827e-02	ci left: 2.554245e-02	ci right 2.640900e-02	k: 13506	n:520000
Cons ci ratio: 1.107409e-01	ci left: 2.270694e-03	ci right 2.538744e-03	k: 1249	n:520000
KS ci ratio: 6.191087e-03	ci left: 4.339864e-01	ci right 4.366835e-01	k: 226374	n:520000
PIK3CA   520000 perm   217 sec   (2398 perm/sec)   p_kst 4.353346e-01   p_cons 2.401923e-03   p_joint 2.597308e-02

Joint ci ratio: 3.288059e-02	ci left: 2.568739e-02	ci right 2.654799e-02	k: 13841	n:530000
Cons ci ratio: 1.097360e-01	ci left: 2.270050e-03	ci right 2.535436e-03	k: 1272	n:530000
KS ci ratio: 6.131799e-03	ci left: 4.340476e-01	ci right 4.367191e-01	k: 230753	n:530000
PIK3CA   530000 perm   223 sec   (2377 perm/sec)   p_kst 4.353830e-01   p_cons 2.400000e-03   p_joint 2.611509e-02

Joint ci ratio: 3.265944e-02	ci left: 2.556064e-02	ci right 2.641112e-02	k: 14031	n:540000
Cons ci ratio: 1.088844e-01	ci left: 2.264037e-03	ci right 2.526533e-03	k: 1292	n:540000
KS ci ratio: 6.074617e-03	ci left: 4.340715e-01	ci right 4.367181e-01	k: 235113	n:540000
PIK3CA   540000 perm   229 sec   (2356 perm/sec)   p_kst 4.353944e-01   p_cons 2.392593e-03   p_joint 2.598333e-02

Joint ci ratio: 3.236100e-02	ci left: 2.556479e-02	ci right 2.640749e-02	k: 14291	n:550000
Cons ci ratio: 1.078057e-01	ci left: 2.268864e-03	ci right 2.529149e-03	k: 1318	n:550000
KS ci ratio: 6.019273e-03	ci left: 4.340727e-01	ci right 4.366952e-01	k: 239461	n:550000
PIK3CA   550000 perm   236 sec   (2335 perm/sec)   p_kst 4.353836e-01   p_cons 2.396364e-03   p_joint 2.598364e-02

Joint ci ratio: 3.207173e-02	ci left: 2.556705e-02	ci right 2.640215e-02	k: 14550	n:560000
Cons ci ratio: 1.070380e-01	ci left: 2.261365e-03	ci right 2.518826e-03	k: 1337	n:560000
KS ci ratio: 5.965934e-03	ci left: 4.340312e-01	ci right 4.366301e-01	k: 243785	n:560000
PIK3CA   560000 perm   242 sec   (2314 perm/sec)   p_kst 4.353304e-01   p_cons 2.387500e-03   p_joint 2.598214e-02

Joint ci ratio: 3.198462e-02	ci left: 2.526463e-02	ci right 2.608757e-02	k: 14634	n:570000
Cons ci ratio: 1.062081e-01	ci left: 2.257552e-03	ci right 2.512461e-03	k: 1358	n:570000
KS ci ratio: 5.914030e-03	ci left: 4.339878e-01	ci right 4.365637e-01	k: 248107	n:570000
PIK3CA   570000 perm   248 sec   (2294 perm/sec)   p_kst 4.352754e-01   p_cons 2.382456e-03   p_joint 2.567368e-02

Joint ci ratio: 3.173696e-02	ci left: 2.522242e-02	ci right 2.603750e-02	k: 14864	n:580000
Cons ci ratio: 1.052825e-01	ci left: 2.258913e-03	ci right 2.511615e-03	k: 1382	n:580000
KS ci ratio: 5.864775e-03	ci left: 4.338356e-01	ci right 4.363892e-01	k: 252365	n:580000
PIK3CA   580000 perm   255 sec   (2275 perm/sec)   p_kst 4.351121e-01   p_cons 2.382759e-03   p_joint 2.562759e-02

Joint ci ratio: 3.146183e-02	ci left: 2.523380e-02	ci right 2.604206e-02	k: 15125	n:590000
Cons ci ratio: 1.045297e-01	ci left: 2.253635e-03	ci right 2.503834e-03	k: 1402	n:590000
KS ci ratio: 5.815465e-03	ci left: 4.337955e-01	ci right 4.363272e-01	k: 256686	n:590000
PIK3CA   590000 perm   262 sec   (2255 perm/sec)   p_kst 4.350610e-01   p_cons 2.376271e-03   p_joint 2.563559e-02

Joint ci ratio: 3.101730e-02	ci left: 2.552767e-02	ci right 2.633358e-02	k: 15557	n:600000
Cons ci ratio: 1.037199e-01	ci left: 2.251786e-03	ci right 2.499724e-03	k: 1424	n:600000
KS ci ratio: 5.767222e-03	ci left: 4.337701e-01	ci right 4.362806e-01	k: 261015	n:600000
PIK3CA   600000 perm   268 sec   (2237 perm/sec)   p_kst 4.350250e-01   p_cons 2.373333e-03   p_joint 2.592833e-02

Joint ci ratio: 3.076230e-02	ci left: 2.553050e-02	ci right 2.632975e-02	k: 15816	n:610000
Cons ci ratio: 1.029642e-01	ci left: 2.248408e-03	ci right 2.494061e-03	k: 1445	n:610000
KS ci ratio: 5.720065e-03	ci left: 4.337538e-01	ci right 4.362436e-01	k: 265349	n:610000
PIK3CA   610000 perm   275 sec   (2218 perm/sec)   p_kst 4.349984e-01   p_cons 2.368852e-03   p_joint 2.592787e-02

Joint ci ratio: 3.185843e-02	ci left: 2.345722e-02	ci right 2.421821e-02	k: 14778	n:620000
Cons ci ratio: 1.023297e-01	ci left: 2.240430e-03	ci right 2.483612e-03	k: 1463	n:620000
KS ci ratio: 5.674194e-03	ci left: 4.337252e-01	ci right 4.361948e-01	k: 269675	n:620000
PIK3CA   620000 perm   282 sec   (2199 perm/sec)   p_kst 4.349597e-01   p_cons 2.359677e-03   p_joint 2.383548e-02

Joint ci ratio: 3.159097e-02	ci left: 2.348014e-02	ci right 2.423536e-02	k: 15029	n:630000
Cons ci ratio: 1.015011e-01	ci left: 2.241992e-03	ci right 2.483256e-03	k: 1487	n:630000
KS ci ratio: 5.628301e-03	ci left: 4.337944e-01	ci right 4.362443e-01	k: 274062	n:630000
PIK3CA   630000 perm   289 sec   (2180 perm/sec)   p_kst 4.350190e-01   p_cons 2.360317e-03   p_joint 2.385556e-02

Joint ci ratio: 3.135537e-02	ci left: 2.346515e-02	ci right 2.421417e-02	k: 15256	n:640000
Cons ci ratio: 1.006256e-01	ci left: 2.246559e-03	ci right 2.486106e-03	k: 1513	n:640000
KS ci ratio: 5.585688e-03	ci left: 4.336693e-01	ci right 4.361000e-01	k: 278326	n:640000
PIK3CA   640000 perm   296 sec   (2162 perm/sec)   p_kst 4.348844e-01   p_cons 2.364062e-03   p_joint 2.383750e-02

Joint ci ratio: 3.110130e-02	ci left: 2.348577e-02	ci right 2.422926e-02	k: 15506	n:650000
Cons ci ratio: 9.980486e-02	ci left: 2.249494e-03	ci right 2.487283e-03	k: 1538	n:650000
KS ci ratio: 5.541962e-03	ci left: 4.337313e-01	ci right 4.361432e-01	k: 282709	n:650000
PIK3CA   650000 perm   303 sec   (2145 perm/sec)   p_kst 4.349369e-01   p_cons 2.366154e-03   p_joint 2.385538e-02

Outputting figure to mutsig2_images.part000000000131/PIK3CA.3_3287_650000_0.43494_0.0023662_0.023855.png
                gene_name: PIK3CA
               theta_stop: 0.100 
                    nperm: 650000 
                     p_ks: 0.43 
        ci_ks_bounds_left: 0.43 
       ci_ks_bounds_right: 0.44 
                   p_cons: 0.0024 
      ci_cons_bounds_left: 0.0022 
     ci_cons_bounds_right: 0.0025 
                  p_joint: 0.024 
     ci_joint_bounds_left: 0.023 
    ci_joint_bounds_right: 0.024 

Current progress: 33 percent done.
PIK3R5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.924448e-02	ci left: 6.329156e-01	ci right 6.518014e-01	k: 6424	n:10000
KS ci ratio: 2.117623e-02	ci left: 7.657748e-01	ci right 7.822653e-01	k: 7741	n:10000
PIK3R5   10000 perm   2 sec   (5543 perm/sec)   p_kst 7.741000e-01   p_cons 6.424000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000131/PIK3R5.3_2715_10000_0.7741_0.6424_1.png
                gene_name: PIK3R5
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
PIBF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.036773e-02	ci left: 6.153256e-01	ci right 6.344016e-01	k: 6249	n:10000
KS ci ratio: 5.534169e-02	ci left: 3.247555e-01	ci right 3.433413e-01	k: 3340	n:10000
PIBF1   10000 perm   2 sec   (6112 perm/sec)   p_kst 3.340000e-01   p_cons 6.249000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000131/PIBF1.2_2342_10000_0.334_0.6249_1.png
                gene_name: PIBF1
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.62 
      ci_cons_bounds_left: 0.62 
     ci_cons_bounds_right: 0.63 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000131
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 131 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1649>
Subject: Job 8704307: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1649>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000132> was used as the working directory.
Started at Thu Nov 15 19:35:43 2012
Results reported at Thu Nov 15 19:38:42 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000132.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000132.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 132  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000132.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    207.11 sec.
    Max Memory :      6034 MB
    Max Swap   :      8825 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
132
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 132
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 132: processing genes 11852 - 11941
Calculating significance of each gene.
Using projection method.
11852	PKDCC	1
11853	PKDREJ	4.946736e-01
11854	PKHD1	8.573705e-01
In gene PKHD1L1 the following bins exceed PROBCAP:
    THCA-ET-A25G-TP	categ 6	N = 11932   n = 1	mu =   3.38e-08
11855	PKHD1L1	7.272566e-03
11856	PKIA	1
11857	PKIB	1
11858	PKIG	1
11859	PKLR	1
11860	PKM2	1
11861	PKMYT1	1
11862	PKN1	1
11863	PKN2	1
11864	PKN3	1
11865	PKNOX1	1
11866	PKNOX2	1
11867	PKP1	1
11868	PKP2	1
11869	PKP3	1
11870	PKP4	1
11871	PLA1A	1.158133e-01
11872	PLA2G10	1
11873	PLA2G12A	1
11874	PLA2G12B	1
11875	PLA2G15	1
11876	PLA2G16	1
11877	PLA2G1B	1
11878	PLA2G2A	1
11879	PLA2G2C	1
11880	PLA2G2D	1
11881	PLA2G2E	1
11882	PLA2G2F	1
11883	PLA2G3	1
11884	PLA2G4A	1
11885	PLA2G4B	1
11886	PLA2G4C	1
11887	PLA2G4D	1
11888	PLA2G4E	1
11889	PLA2G4F	2.907511e-01
11890	PLA2G5	2.796859e-02
11891	PLA2G6	1
11892	PLA2G7	1
11893	PLA2R1	1.144675e-01
11894	PLAA	1
11895	PLAC1	1
11896	PLAC1L	1
In gene PLAC4 the following bins exceed PROBCAP:
    THCA-ET-A25O-TP	categ 6	N = 142     n = 1	mu =   6.82e-08
11897	PLAC4	3.130395e-03
11898	PLAC8	1
11899	PLAC8L1	1
11900	PLAC9	1
11901	PLAG1	1.771968e-01
11902	PLAGL1	1
11903	PLAGL2	1
11904	PLAT	1
11905	PLAU	2.736721e-02
11906	PLAUR	1
11907	PLB1	3.642792e-01
11908	PLBD1	1
11909	PLBD2	1
11910	PLCB1	1
11911	PLCB2	2.601691e-01
11912	PLCB3	1
11913	PLCB4	1
11914	PLCD1	1.296024e-01
11915	PLCD3	1
11916	PLCD4	2.472646e-01
11917	PLCE1	1
11918	PLCG1	1
11919	PLCG2	3.959779e-01
11920	PLCH1	5.522955e-01
11921	PLCH2	1
11922	PLCL1	1.881208e-01
11923	PLCL2	1
11924	PLCXD1	1.082021e-01
11925	PLCXD2	1
11926	PLCXD3	1
11927	PLCZ1	1
11928	PLD1	1
11929	PLD2	3.764294e-01
11930	PLD3	1
11931	PLD4	1
11932	PLD5	5.221829e-02
11933	PLD6	1
11934	PLDN	1
11935	PLEC	2.877167e-01
11936	PLEK	1.344022e-02
11937	PLEK2	1
11938	PLEKHA1	1
11939	PLEKHA2	1
11940	PLEKHA3	1
11941	PLEKHA4	1
Done

Running MutSig 2:
Scatter job 132: processing genes 11852 - 11941
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PKHD1L1
Processing conservation and coverage...
76% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.502186e-02	ci left: 1.677948e-01	ci right 1.827948e-01	k: 1752	n:10000
Cons ci ratio: 4.132906e-02	ci left: 4.636729e-01	ci right 4.833426e-01	k: 4735	n:10000
KS ci ratio: 1.193266e-01	ci left: 9.155922e-02	ci right 1.032765e-01	k: 973	n:10000
PKHD1L1   10000 perm   3 sec   (3036 perm/sec)   p_kst 9.730000e-02   p_cons 4.735000e-01   p_joint 1.752000e-01

Joint ci ratio: 5.752079e-02	ci left: 1.830013e-01	ci right 1.938895e-01	k: 3768	n:20000
Cons ci ratio: 2.911236e-02	ci left: 4.685078e-01	ci right 4.823993e-01	k: 9509	n:20000
KS ci ratio: 8.488614e-02	ci left: 9.224545e-02	ci right 1.004723e-01	k: 1926	n:20000
PKHD1L1   20000 perm   10 sec   (1999 perm/sec)   p_kst 9.630000e-02   p_cons 4.754500e-01   p_joint 1.884000e-01

Outputting figure to mutsig2_images.part000000000132/PKHD1L1.5_13044_20000_0.0963_0.47545_0.1884.png
                gene_name: PKHD1L1
               theta_stop: 0.085 
                    nperm: 20000 
                     p_ks: 0.096 
        ci_ks_bounds_left: 0.092 
       ci_ks_bounds_right: 0.10 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.48 
                  p_joint: 0.19 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.19 

Current progress: 25 percent done.
PKHD1
Processing conservation and coverage...
79% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.233084e-02	ci left: 5.854025e-01	ci right 6.047421e-01	k: 5951	n:10000
Cons ci ratio: 6.100950e-02	ci left: 2.831991e-01	ci right 3.011221e-01	k: 2921	n:10000
KS ci ratio: 3.399460e-02	ci left: 5.609292e-01	ci right 5.804296e-01	k: 5707	n:10000
PKHD1   10000 perm   3 sec   (3283 perm/sec)   p_kst 5.707000e-01   p_cons 2.921000e-01   p_joint 5.951000e-01

Outputting figure to mutsig2_images.part000000000132/PKHD1.3_12528_10000_0.5707_0.2921_0.5951.png
                gene_name: PKHD1
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.57 
        ci_ks_bounds_left: 0.56 
       ci_ks_bounds_right: 0.58 
                   p_cons: 0.29 
      ci_cons_bounds_left: 0.28 
     ci_cons_bounds_right: 0.30 
                  p_joint: 0.60 
     ci_joint_bounds_left: 0.59 
    ci_joint_bounds_right: 0.60 

Current progress: 50 percent done.
PLEC
Processing conservation and coverage...
67% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.922299e-02	ci left: 1.282615e-01	ci right 1.417519e-01	k: 1349	n:10000
Cons ci ratio: 7.939167e-02	ci left: 1.881605e-01	ci right 2.038170e-01	k: 1959	n:10000
KS ci ratio: 9.580454e-02	ci left: 1.364873e-01	ci right 1.503211e-01	k: 1433	n:10000
PLEC   10000 perm   3 sec   (3064 perm/sec)   p_kst 1.433000e-01   p_cons 1.959000e-01   p_joint 1.349000e-01

Outputting figure to mutsig2_images.part000000000132/PLEC.3_14884_10000_0.1433_0.1959_0.1349.png
                gene_name: PLEC
               theta_stop: 0.099 
                    nperm: 10000 
                     p_ks: 0.14 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.20 
      ci_cons_bounds_left: 0.19 
     ci_cons_bounds_right: 0.20 
                  p_joint: 0.13 
     ci_joint_bounds_left: 0.13 
    ci_joint_bounds_right: 0.14 

Current progress: 75 percent done.
PLA2R1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.572663e-02	ci left: 1.366833e-01	ci right 1.505251e-01	k: 1435	n:10000
Cons ci ratio: 1.124773e-01	ci left: 1.021764e-01	ci right 1.144528e-01	k: 1082	n:10000
KS ci ratio: 1.771079e-02	ci left: 8.230004e-01	ci right 8.378066e-01	k: 8305	n:10000
PLA2R1   10000 perm   2 sec   (5102 perm/sec)   p_kst 8.305000e-01   p_cons 1.082000e-01   p_joint 1.435000e-01

Joint ci ratio: 6.396297e-02	ci left: 1.530194e-01	ci right 1.631802e-01	k: 3161	n:20000
Cons ci ratio: 7.961742e-02	ci left: 1.037797e-01	ci right 1.124346e-01	k: 2161	n:20000
KS ci ratio: 1.249397e-02	ci left: 8.258851e-01	ci right 8.363185e-01	k: 16623	n:20000
PLA2R1   20000 perm   4 sec   (4588 perm/sec)   p_kst 8.311500e-01   p_cons 1.080500e-01   p_joint 1.580500e-01

Outputting figure to mutsig2_images.part000000000132/PLA2R1.2_4520_20000_0.83115_0.10805_0.15805.png
                gene_name: PLA2R1
               theta_stop: 0.080 
                    nperm: 20000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.83 
       ci_ks_bounds_right: 0.84 
                   p_cons: 0.11 
      ci_cons_bounds_left: 0.10 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.15 
    ci_joint_bounds_right: 0.16 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000132
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 132 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1424>
Subject: Job 8704308: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1424>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000133> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 19:39:32 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000133.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000133.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 133  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000133.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    324.94 sec.
    Max Memory :      5677 MB
    Max Swap   :      8378 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
133
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 133
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 133: processing genes 11942 - 12032
Calculating significance of each gene.
Using projection method.
11942	PLEKHA5	2.239026e-01
11943	PLEKHA6	2.440779e-01
11944	PLEKHA7	2.728022e-01
11945	PLEKHA8	7.952110e-02
11946	PLEKHA9	1
11947	PLEKHB1	1
11948	PLEKHB2	1
11949	PLEKHF1	1
11950	PLEKHF2	1
11951	PLEKHG1	9.453705e-02
11952	PLEKHG2	1
11953	PLEKHG3	1
11954	PLEKHG4	1
11955	PLEKHG4B	1
11956	PLEKHG5	1
11957	PLEKHG6	1
11958	PLEKHG7	1
11959	PLEKHH1	1
11960	PLEKHH2	1
11961	PLEKHH3	1
11962	PLEKHJ1	1
11963	PLEKHM1	1
11964	PLEKHM2	1.356873e-01
11965	PLEKHM3	1
11966	PLEKHN1	1
11967	PLEKHO1	1
11968	PLEKHO2	1
11969	PLG	2.909499e-01
11970	PLIN1	1
11971	PLIN2	1
11972	PLIN3	1
11973	PLIN4	1
11974	PLIN5	1.511792e-01
11975	PLK1	1
11976	PLK1S1	1
11977	PLK2	1.084348e-01
11978	PLK3	1
11979	PLK4	3.156264e-01
11980	PLLP	1
11981	PLN	1
11982	PLOD1	1
11983	PLOD2	1
11984	PLOD3	1
11985	PLP1	4.888435e-04
11986	PLP2	1
11987	PLRG1	1
11988	PLS1	1
11989	PLS3	1
11990	PLSCR1	1
11991	PLSCR2	1
11992	PLSCR3	1
11993	PLSCR4	1
11994	PLSCR5	1
11995	PLTP	1
11996	PLUNC	1
11997	PLVAP	1
11998	PLXDC1	1
11999	PLXDC2	2.313677e-02
12000/18093 12000	PLXNA1	1
12001	PLXNA2	4.803649e-01
12002	PLXNA3	1
12003	PLXNA4	5.278370e-01
12004	PLXNB1	7.913275e-02
12005	PLXNB2	4.553757e-01
12006	PLXNB3	2.144909e-01
12007	PLXNC1	2.220761e-01
12008	PLXND1	1
12009	PM20D1	1.263114e-01
12010	PM20D2	1
12011	PMAIP1	1
12012	PMCH	1
12013	PMEPA1	3.314172e-03
12014	PMF1	1
12015	PMFBP1	1
12016	PML	1
12017	PMM1	1
12018	PMM2	1
12019	PMP2	1
12020	PMP22	1
12021	PMPCA	1
12022	PMPCB	1
12023	PMS1	1.805234e-01
12024	PMS2	1
12025	PMVK	1
12026	PNCK	1
12027	PNKD	1
12028	PNKP	1
12029	PNLDC1	1.715724e-01
12030	PNLIP	1
12031	PNLIPRP1	1
12032	PNLIPRP2	1
Done

Running MutSig 2:
Scatter job 133: processing genes 11942 - 12032
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PLXNB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.597726e-02	ci left: 2.522150e-01	ci right 2.695245e-01	k: 2608	n:10000
Cons ci ratio: 2.098973e-01	ci left: 3.015459e-02	ci right 3.732038e-02	k: 336	n:10000
KS ci ratio: 3.287024e-02	ci left: 5.773758e-01	ci right 5.967734e-01	k: 5871	n:10000
PLXNB1   10000 perm   3 sec   (3886 perm/sec)   p_kst 5.871000e-01   p_cons 3.360000e-02   p_joint 2.608000e-01

Joint ci ratio: 4.465319e-02	ci left: 2.718979e-01	ci right 2.843667e-01	k: 5562	n:20000
Cons ci ratio: 1.587049e-01	ci left: 2.724667e-02	ci right 3.199140e-02	k: 591	n:20000
KS ci ratio: 2.241467e-02	ci left: 5.977840e-01	ci right 6.113856e-01	k: 12092	n:20000
PLXNB1   20000 perm   9 sec   (2345 perm/sec)   p_kst 6.046000e-01   p_cons 2.955000e-02   p_joint 2.781000e-01

Joint ci ratio: 4.608141e-02	ci left: 1.898359e-01	ci right 1.988234e-01	k: 5829	n:30000
Cons ci ratio: 1.300365e-01	ci left: 2.748520e-02	ci right 3.133998e-02	k: 881	n:30000
KS ci ratio: 1.836312e-02	ci left: 5.974370e-01	ci right 6.085430e-01	k: 18090	n:30000
PLXNB1   30000 perm   12 sec   (2572 perm/sec)   p_kst 6.030000e-01   p_cons 2.936667e-02   p_joint 1.943000e-01

Joint ci ratio: 4.964466e-02	ci left: 1.314921e-01	ci right 1.382110e-01	k: 5393	n:40000
Cons ci ratio: 1.110679e-01	ci left: 2.852023e-02	ci right 3.189842e-02	k: 1207	n:40000
KS ci ratio: 1.595460e-02	ci left: 5.966323e-01	ci right 6.062530e-01	k: 24058	n:40000
PLXNB1   40000 perm   15 sec   (2690 perm/sec)   p_kst 6.014500e-01   p_cons 3.017500e-02   p_joint 1.348250e-01

Joint ci ratio: 4.737904e-02	ci left: 1.175596e-01	ci right 1.232845e-01	k: 6020	n:50000
Cons ci ratio: 9.930849e-02	ci left: 2.871727e-02	ci right 3.173760e-02	k: 1510	n:50000
KS ci ratio: 1.430456e-02	ci left: 5.959908e-01	ci right 6.045976e-01	k: 30015	n:50000
PLXNB1   50000 perm   18 sec   (2757 perm/sec)   p_kst 6.003000e-01   p_cons 3.020000e-02   p_joint 1.204000e-01

Outputting figure to mutsig2_images.part000000000133/PLXNB1.3_6552_50000_0.6003_0.0302_0.1204.png
                gene_name: PLXNB1
               theta_stop: 0.099 
                    nperm: 50000 
                     p_ks: 0.60 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.030 
      ci_cons_bounds_left: 0.029 
     ci_cons_bounds_right: 0.032 
                  p_joint: 0.12 
     ci_joint_bounds_left: 0.12 
    ci_joint_bounds_right: 0.12 

Current progress: 17 percent done.
PLEKHG1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.063575e-02	ci left: 9.263722e-01	ci right 9.363747e-01	k: 9315	n:10000
KS ci ratio: 6.784099e-02	ci left: 2.417346e-01	ci right 2.588111e-01	k: 2502	n:10000
PLEKHG1   10000 perm   2 sec   (4833 perm/sec)   p_kst 2.502000e-01   p_cons 9.315000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000133/PLEKHG1.2_4218_10000_0.2502_0.9315_1.png
                gene_name: PLEKHG1
               theta_stop: 0.068 
                    nperm: 10000 
                     p_ks: 0.25 
        ci_ks_bounds_left: 0.24 
       ci_ks_bounds_right: 0.26 
                   p_cons: 0.93 
      ci_cons_bounds_left: 0.93 
     ci_cons_bounds_right: 0.94 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
PLP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.584290e-03	ci left: 9.772755e-01	ci right 9.828399e-01	k: 9802	n:10000
KS ci ratio: 3.141317e-02	ci left: 5.992548e-01	ci right 6.184817e-01	k: 6089	n:10000
PLP1   10000 perm   1 sec   (7062 perm/sec)   p_kst 6.089000e-01   p_cons 9.802000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000133/PLP1.2_862_10000_0.6089_0.9802_1.png
                gene_name: PLP1
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
PLXDC2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.826473e-02	ci left: 3.024292e-01	ci right 3.206807e-01	k: 3115	n:10000
Cons ci ratio: 4.082690e-02	ci left: 4.697655e-01	ci right 4.894464e-01	k: 4796	n:10000
KS ci ratio: 1.388648e-01	ci left: 6.865367e-02	ci right 7.899624e-02	k: 737	n:10000
PLXDC2   10000 perm   2 sec   (6508 perm/sec)   p_kst 7.370000e-02   p_cons 4.796000e-01   p_joint 3.115000e-01

Joint ci ratio: 6.688983e-02	ci left: 1.416260e-01	ci right 1.514770e-01	k: 2930	n:20000
Cons ci ratio: 2.867535e-02	ci left: 4.760524e-01	ci right 4.899526e-01	k: 9660	n:20000
KS ci ratio: 9.870057e-02	ci left: 6.948088e-02	ci right 7.674382e-02	k: 1461	n:20000
PLXDC2   20000 perm   4 sec   (5641 perm/sec)   p_kst 7.305000e-02   p_cons 4.830000e-01   p_joint 1.465000e-01

Outputting figure to mutsig2_images.part000000000133/PLXDC2.2_1646_20000_0.07305_0.483_0.1465.png
                gene_name: PLXDC2
               theta_stop: 0.099 
                    nperm: 20000 
                     p_ks: 0.073 
        ci_ks_bounds_left: 0.069 
       ci_ks_bounds_right: 0.077 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.48 
     ci_cons_bounds_right: 0.49 
                  p_joint: 0.15 
     ci_joint_bounds_left: 0.14 
    ci_joint_bounds_right: 0.15 

Current progress: 67 percent done.
PLXNB3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.639181e-02	ci left: 8.440725e-01	ci right 8.581223e-01	k: 8512	n:10000
Cons ci ratio: 5.464026e-02	ci left: 3.304153e-01	ci right 3.490782e-01	k: 3397	n:10000
KS ci ratio: 4.741593e-02	ci left: 3.962539e-01	ci right 4.156010e-01	k: 4059	n:10000
PLXNB3   10000 perm   2 sec   (4184 perm/sec)   p_kst 4.059000e-01   p_cons 3.397000e-01   p_joint 8.512000e-01

Outputting figure to mutsig2_images.part000000000133/PLXNB3.2_5988_10000_0.4059_0.3397_0.8512.png
                gene_name: PLXNB3
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.35 
                  p_joint: 0.85 
     ci_joint_bounds_left: 0.84 
    ci_joint_bounds_right: 0.86 

Current progress: 83 percent done.
PMEPA1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.613156e-02	ci left: 2.513249e-01	ci right 2.686151e-01	k: 2599	n:10000
Cons ci ratio: 1.260105e-02	ci left: 9.005222e-01	ci right 9.120399e-01	k: 9064	n:10000
KS ci ratio: 2.209987e-01	ci left: 2.712237e-02	ci right 3.395474e-02	k: 304	n:10000
PMEPA1   10000 perm   1 sec   (6739 perm/sec)   p_kst 3.040000e-02   p_cons 9.064000e-01   p_joint 2.599000e-01

Joint ci ratio: 2.815227e-02	ci left: 4.852479e-01	ci right 4.991544e-01	k: 9844	n:20000
Cons ci ratio: 8.987328e-03	ci left: 9.007503e-01	ci right 9.089315e-01	k: 18098	n:20000
KS ci ratio: 1.562733e-01	ci left: 2.811217e-02	ci right 3.292560e-02	k: 609	n:20000
PMEPA1   20000 perm   3 sec   (5751 perm/sec)   p_kst 3.045000e-02   p_cons 9.049000e-01   p_joint 4.922000e-01

Joint ci ratio: 2.324272e-02	ci left: 4.809956e-01	ci right 4.923403e-01	k: 14600	n:30000
Cons ci ratio: 7.319248e-03	ci left: 9.019645e-01	ci right 9.086234e-01	k: 27160	n:30000
KS ci ratio: 1.260431e-01	ci left: 2.926149e-02	ci right 3.322998e-02	k: 936	n:30000
PMEPA1   30000 perm   5 sec   (5493 perm/sec)   p_kst 3.120000e-02   p_cons 9.053333e-01   p_joint 4.866667e-01

Joint ci ratio: 1.249963e-02	ci left: 7.064045e-01	ci right 7.153149e-01	k: 28435	n:40000
Cons ci ratio: 6.374773e-03	ci left: 9.014258e-01	ci right 9.072153e-01	k: 36174	n:40000
KS ci ratio: 1.077118e-01	ci left: 3.032112e-02	ci right 3.379725e-02	k: 1281	n:40000
PMEPA1   40000 perm   8 sec   (5315 perm/sec)   p_kst 3.202500e-02   p_cons 9.043500e-01   p_joint 7.108750e-01

Joint ci ratio: 4.805295e-02	ci left: 1.146304e-01	ci right 1.202941e-01	k: 5872	n:50000
Cons ci ratio: 5.946623e-03	ci left: 8.941206e-01	ci right 8.994732e-01	k: 44841	n:50000
KS ci ratio: 9.781652e-02	ci left: 2.959573e-02	ci right 3.265902e-02	k: 1555	n:50000
PMEPA1   50000 perm   10 sec   (5160 perm/sec)   p_kst 3.110000e-02   p_cons 8.968200e-01   p_joint 1.174400e-01

Outputting figure to mutsig2_images.part000000000133/PMEPA1.2_888_50000_0.0311_0.89682_0.11744.png
                gene_name: PMEPA1
               theta_stop: 0.098 
                    nperm: 50000 
                     p_ks: 0.031 
        ci_ks_bounds_left: 0.030 
       ci_ks_bounds_right: 0.033 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 0.12 
     ci_joint_bounds_left: 0.11 
    ci_joint_bounds_right: 0.12 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000133
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 133 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1651>
Subject: Job 8704309: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1651>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000134> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 22:30:37 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000134.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000134.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 134  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000134.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10632.76 sec.
    Max Memory :      5784 MB
    Max Swap   :      8535 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
134
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 134
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 134: processing genes 12033 - 12122
Calculating significance of each gene.
Using projection method.
12033	PNLIPRP3	1
12034	PNMA1	1
12035	PNMA2	1
12036	PNMA3	1
12037	PNMA5	1.554089e-01
12038	PNMAL1	1
12039	PNMAL2	1.202940e-01
12040	PNMT	1
12041	PNN	1
12042	PNO1	1
12043	PNOC	6.366007e-02
12044	PNP	1
12045	PNPLA1	1
12046	PNPLA2	1
12047	PNPLA3	1
12048	PNPLA4	1
12049	PNPLA5	1
12050	PNPLA6	1
12051	PNPLA7	1
12052	PNPLA8	1
12053	PNPO	1
12054	PNPT1	1
12055	PNRC1	1
12056	POC1A	1
12057	POC1B	1
12058	POC5	1
12059	PODN	1
12060	PODNL1	1
In gene PODXL the following bins exceed PROBCAP:
    THCA-EL-A3CV-TP	categ 6	N = 1426    n = 1	mu =   6.84e-08
12061	PODXL	4.948907e-02
12062	PODXL2	1
12063	POF1B	1
12064	POFUT1	1
12065	POFUT2	1
12066	POGK	1
12067	POGZ	3.193315e-01
12068	POLA1	1
12069	POLA2	1
12070	POLB	1.367507e-01
12071	POLD1	1
12072	POLD2	1
In gene POLD3 the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 1449    n = 1	mu =   2.02e-07
12073	POLD3	1.448265e-01
12074	POLD4	1
In gene POLDIP2 the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 880     n = 1	mu =   1.33e-07
    THCA-BJ-A190-TP	categ 6	N = 852     n = 1	mu =   1.71e-07
    THCA-CE-A27D-TP	categ 6	N = 745     n = 1	mu =   1.03e-07
    THCA-EL-A3CM-TP	categ 6	N = 752     n = 1	mu =   1.06e-07
12075	POLDIP2	5.462297e-13
12076	POLDIP3	1
12077	POLE	6.415293e-01
12078	POLE2	1.406644e-01
12079	POLE3	1
12080	POLE4	1
12081	POLG	2.546447e-01
12082	POLG2	1
12083	POLH	1
12084	POLI	1
12085	POLK	1
12086	POLL	1
12087	POLM	1
12088	POLN	1
12089	POLQ	4.361310e-01
12090	POLR1A	3.709146e-01
12091	POLR1B	5.060294e-02
12092	POLR1C	1
12093	POLR1D	1
12094	POLR1E	1
12095	POLR2A	5.984390e-01
12096	POLR2B	4.262135e-01
12097	POLR2C	1
12098	POLR2D	1
12099	POLR2E	1
12100	POLR2F	1
12101	POLR2G	1
12102	POLR2H	1
12103	POLR2I	1
12104	POLR2J	1
12105	POLR2J2	1
12106	POLR2K	1
12107	POLR2L	1
12108	POLR3A	1
12109	POLR3B	1.563859e-01
12110	POLR3C	1
12111	POLR3D	8.676162e-02
12112	POLR3E	1
12113	POLR3F	1
12114	POLR3G	1
12115	POLR3GL	1
12116	POLR3H	1
12117	POLR3K	1
12118	POLRMT	1
In gene POM121 the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 2593    n = 1	mu =   2.02e-07
12119	POM121	5.696543e-02
12120	POM121C	7.769262e-02
12121	POM121L12	1.106921e-01
12122	POMC	4.696031e-02
Done

Running MutSig 2:
Scatter job 134: processing genes 12033 - 12122
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
POLDIP2
Processing conservation and coverage...
Processing mutations... 
Skipping 1 mutations outside transcript range of this gene.
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.177092e-01	ci left: 4.232871e-03	ci right 7.265981e-03	k: 56	n:10000
Cons ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
POLDIP2   10000 perm   2 sec   (5971 perm/sec)   p_kst 1.000000e-04   p_cons 1   p_joint 5.600000e-03

Joint ci ratio: 4.611327e-01	ci left: 2.773589e-03	ci right 4.475763e-03	k: 71	n:20000
Cons ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
POLDIP2   20000 perm   7 sec   (2925 perm/sec)   p_kst 5.000000e-05   p_cons 1   p_joint 3.550000e-03

Joint ci ratio: 5.905189e-01	ci left: 1.037499e-03	ci right 1.930210e-03	k: 43	n:30000
Cons ci ratio: 1.306580e-04	ci left: 9.998770e-01	ci right 1	k: 30000	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
POLDIP2   30000 perm   9 sec   (3284 perm/sec)   p_kst 3.333333e-05   p_cons 1   p_joint 1.433333e-03

Joint ci ratio: 8.763085e-01	ci left: 2.860045e-04	ci right 7.416724e-04	k: 19	n:40000
Cons ci ratio: 9.799510e-05	ci left: 9.999078e-01	ci right 1	k: 40000	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
POLDIP2   40000 perm   11 sec   (3580 perm/sec)   p_kst 2.500000e-05   p_cons 1   p_joint 4.750000e-04

Joint ci ratio: 6.821524e-01	ci left: 4.377994e-04	ci right 9.033700e-04	k: 32	n:50000
Cons ci ratio: 7.839686e-05	ci left: 9.999262e-01	ci right 1	k: 50000	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
POLDIP2   50000 perm   13 sec   (3768 perm/sec)   p_kst 2.000000e-05   p_cons 1   p_joint 6.400000e-04

Joint ci ratio: 7.155059e-01	ci left: 3.237191e-04	ci right 6.940741e-04	k: 29	n:60000
Cons ci ratio: 6.533116e-05	ci left: 9.999385e-01	ci right 1	k: 60000	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
POLDIP2   60000 perm   15 sec   (3881 perm/sec)   p_kst 1.666667e-05   p_cons 1   p_joint 4.833333e-04

Joint ci ratio: 6.928013e-01	ci left: 3.009192e-04	ci right 6.285420e-04	k: 31	n:70000
Cons ci ratio: 5.599840e-05	ci left: 9.999473e-01	ci right 1	k: 70000	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
POLDIP2   70000 perm   18 sec   (3951 perm/sec)   p_kst 1.428571e-05   p_cons 1   p_joint 4.428571e-04

Joint ci ratio: 1.306585e+00	ci left: 4.317386e-05	ci right 1.970303e-04	k: 8	n:80000
Cons ci ratio: 4.899878e-05	ci left: 9.999539e-01	ci right 1	k: 80000	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
POLDIP2   80000 perm   20 sec   (3988 perm/sec)   p_kst 1.250000e-05   p_cons 1   p_joint 1.000000e-04

Joint ci ratio: 1.131525e+00	ci left: 6.101442e-05	ci right 2.186788e-04	k: 11	n:90000
Cons ci ratio: 4.355459e-05	ci left: 9.999590e-01	ci right 1	k: 90000	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
POLDIP2   90000 perm   22 sec   (4004 perm/sec)   p_kst 1.111111e-05   p_cons 1   p_joint 1.222222e-04

Joint ci ratio: 1.012059e+00	ci left: 7.654135e-05	ci right 2.348851e-04	k: 14	n:100000
Cons ci ratio: 3.919922e-05	ci left: 9.999631e-01	ci right 1	k: 100000	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
POLDIP2   100000 perm   25 sec   (4016 perm/sec)   p_kst 1.000000e-05   p_cons 1   p_joint 1.400000e-04

Joint ci ratio: 9.799243e-01	ci left: 7.632364e-05	ci right 2.249011e-04	k: 15	n:110000
Cons ci ratio: 3.563572e-05	ci left: 9.999665e-01	ci right 1	k: 110000	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
POLDIP2   110000 perm   27 sec   (4007 perm/sec)   p_kst 9.090909e-06   p_cons 1   p_joint 1.363636e-04

Joint ci ratio: 6.532326e-01	ci left: 2.031647e-04	ci right 4.056146e-04	k: 35	n:120000
Cons ci ratio: 3.266612e-05	ci left: 9.999693e-01	ci right 1	k: 120000	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
POLDIP2   120000 perm   30 sec   (3989 perm/sec)   p_kst 8.333333e-06   p_cons 1   p_joint 2.916667e-04

Joint ci ratio: 6.276058e-01	ci left: 2.068624e-04	ci right 4.011933e-04	k: 38	n:130000
Cons ci ratio: 3.015338e-05	ci left: 9.999716e-01	ci right 1	k: 130000	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
POLDIP2   130000 perm   33 sec   (3961 perm/sec)   p_kst 7.692308e-06   p_cons 1   p_joint 2.923077e-04

Joint ci ratio: 6.276127e-01	ci left: 1.920859e-04	ci right 3.725381e-04	k: 38	n:140000
Cons ci ratio: 2.799960e-05	ci left: 9.999737e-01	ci right 1	k: 140000	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
POLDIP2   140000 perm   36 sec   (3928 perm/sec)   p_kst 7.142857e-06   p_cons 1   p_joint 2.714286e-04

Joint ci ratio: 6.276187e-01	ci left: 1.792798e-04	ci right 3.477034e-04	k: 38	n:150000
Cons ci ratio: 2.613298e-05	ci left: 9.999754e-01	ci right 1	k: 150000	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
POLDIP2   150000 perm   39 sec   (3894 perm/sec)   p_kst 6.666667e-06   p_cons 1   p_joint 2.533333e-04

Joint ci ratio: 6.121208e-01	ci left: 1.786095e-04	ci right 3.404137e-04	k: 40	n:160000
Cons ci ratio: 2.449969e-05	ci left: 9.999769e-01	ci right 1	k: 160000	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
POLDIP2   160000 perm   41 sec   (3857 perm/sec)   p_kst 6.250000e-06   p_cons 1   p_joint 2.500000e-04

Joint ci ratio: 6.047926e-01	ci left: 1.730778e-04	ci right 3.271690e-04	k: 41	n:170000
Cons ci ratio: 2.305855e-05	ci left: 9.999783e-01	ci right 1	k: 170000	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
POLDIP2   170000 perm   45 sec   (3816 perm/sec)   p_kst 5.882353e-06   p_cons 1   p_joint 2.411765e-04

Joint ci ratio: 5.657262e-01	ci left: 1.918607e-04	ci right 3.472075e-04	k: 47	n:180000
Cons ci ratio: 2.177754e-05	ci left: 9.999795e-01	ci right 1	k: 180000	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
POLDIP2   180000 perm   48 sec   (3773 perm/sec)   p_kst 5.555556e-06   p_cons 1   p_joint 2.611111e-04

Joint ci ratio: 5.435304e-01	ci left: 1.998634e-04	ci right 3.529092e-04	k: 51	n:190000
Cons ci ratio: 2.063136e-05	ci left: 9.999806e-01	ci right 1	k: 190000	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
POLDIP2   190000 perm   51 sec   (3730 perm/sec)   p_kst 5.263158e-06   p_cons 1   p_joint 2.684211e-04

Joint ci ratio: 5.383807e-01	ci left: 1.941863e-04	ci right 3.409416e-04	k: 52	n:200000
Cons ci ratio: 1.959980e-05	ci left: 9.999816e-01	ci right 1	k: 200000	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
POLDIP2   200000 perm   54 sec   (3688 perm/sec)   p_kst 5.000000e-06   p_cons 1   p_joint 2.600000e-04

Joint ci ratio: 5.237609e-01	ci left: 1.973084e-04	ci right 3.408916e-04	k: 55	n:210000
Cons ci ratio: 1.866649e-05	ci left: 9.999824e-01	ci right 1	k: 210000	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
POLDIP2   210000 perm   58 sec   (3646 perm/sec)   p_kst 4.761905e-06   p_cons 1   p_joint 2.619048e-04

Joint ci ratio: 5.146522e-01	ci left: 1.962386e-04	ci right 3.356695e-04	k: 57	n:220000
Cons ci ratio: 1.781802e-05	ci left: 9.999832e-01	ci right 1	k: 220000	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
POLDIP2   220000 perm   61 sec   (3604 perm/sec)   p_kst 4.545455e-06   p_cons 1   p_joint 2.590909e-04

Joint ci ratio: 5.285083e-01	ci left: 1.763807e-04	ci right 3.063294e-04	k: 54	n:230000
Cons ci ratio: 1.704333e-05	ci left: 9.999840e-01	ci right 1	k: 230000	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
POLDIP2   230000 perm   65 sec   (3559 perm/sec)   p_kst 4.347826e-06   p_cons 1   p_joint 2.347826e-04

Joint ci ratio: 5.543128e-01	ci left: 1.510473e-04	ci right 2.699103e-04	k: 49	n:240000
Cons ci ratio: 1.633320e-05	ci left: 9.999846e-01	ci right 1	k: 240000	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
POLDIP2   240000 perm   68 sec   (3521 perm/sec)   p_kst 4.166667e-06   p_cons 1   p_joint 2.041667e-04

Joint ci ratio: 5.909090e-01	ci left: 1.244800e-04	ci right 2.316760e-04	k: 43	n:250000
Cons ci ratio: 1.567987e-05	ci left: 9.999852e-01	ci right 1	k: 250000	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
POLDIP2   250000 perm   72 sec   (3484 perm/sec)   p_kst 4.000000e-06   p_cons 1   p_joint 1.720000e-04

Joint ci ratio: 5.717380e-01	ci left: 1.295327e-04	ci right 2.359836e-04	k: 46	n:260000
Cons ci ratio: 1.507681e-05	ci left: 9.999858e-01	ci right 1	k: 260000	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
POLDIP2   260000 perm   75 sec   (3448 perm/sec)   p_kst 3.846154e-06   p_cons 1   p_joint 1.769231e-04

Joint ci ratio: 5.657519e-01	ci left: 1.279058e-04	ci right 2.314750e-04	k: 47	n:270000
Cons ci ratio: 1.451841e-05	ci left: 9.999863e-01	ci right 1	k: 270000	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
POLDIP2   270000 perm   79 sec   (3410 perm/sec)   p_kst 3.703704e-06   p_cons 1   p_joint 1.740741e-04

Joint ci ratio: 5.657538e-01	ci left: 1.233376e-04	ci right 2.232082e-04	k: 47	n:280000
Cons ci ratio: 1.399990e-05	ci left: 9.999868e-01	ci right 1	k: 280000	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
POLDIP2   280000 perm   83 sec   (3372 perm/sec)   p_kst 3.571429e-06   p_cons 1   p_joint 1.678571e-04

Joint ci ratio: 5.779256e-01	ci left: 1.131860e-04	ci right 2.076275e-04	k: 45	n:290000
Cons ci ratio: 1.351715e-05	ci left: 9.999873e-01	ci right 1	k: 290000	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
POLDIP2   290000 perm   87 sec   (3339 perm/sec)   p_kst 3.448276e-06   p_cons 1   p_joint 1.551724e-04

Joint ci ratio: 5.717450e-01	ci left: 1.122614e-04	ci right 2.045199e-04	k: 46	n:300000
Cons ci ratio: 1.306658e-05	ci left: 9.999877e-01	ci right 1	k: 300000	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
POLDIP2   300000 perm   91 sec   (3306 perm/sec)   p_kst 3.333333e-06   p_cons 1   p_joint 1.533333e-04

Joint ci ratio: 6.048272e-01	ci left: 9.491229e-05	ci right 1.794188e-04	k: 41	n:310000
Cons ci ratio: 1.264508e-05	ci left: 9.999881e-01	ci right 1	k: 310000	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
POLDIP2   310000 perm   95 sec   (3273 perm/sec)   p_kst 3.225806e-06   p_cons 1   p_joint 1.322581e-04

Joint ci ratio: 5.977533e-01	ci left: 9.459504e-05	ci right 1.774078e-04	k: 42	n:320000
Cons ci ratio: 1.224992e-05	ci left: 9.999885e-01	ci right 1	k: 320000	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
POLDIP2   320000 perm   99 sec   (3242 perm/sec)   p_kst 3.125000e-06   p_cons 1   p_joint 1.312500e-04

Joint ci ratio: 5.909219e-01	ci left: 9.430250e-05	ci right 1.755134e-04	k: 43	n:330000
Cons ci ratio: 1.187872e-05	ci left: 9.999888e-01	ci right 1	k: 330000	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
POLDIP2   330000 perm   103 sec   (3211 perm/sec)   p_kst 3.030303e-06   p_cons 1   p_joint 1.303030e-04

Joint ci ratio: 5.909231e-01	ci left: 9.152886e-05	ci right 1.703513e-04	k: 43	n:340000
Cons ci ratio: 1.152934e-05	ci left: 9.999892e-01	ci right 1	k: 340000	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
POLDIP2   340000 perm   107 sec   (3179 perm/sec)   p_kst 2.941176e-06   p_cons 1   p_joint 1.264706e-04

Joint ci ratio: 6.121644e-01	ci left: 8.164861e-05	ci right 1.556215e-04	k: 40	n:350000
Cons ci ratio: 1.119994e-05	ci left: 9.999895e-01	ci right 1	k: 350000	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
POLDIP2   350000 perm   111 sec   (3147 perm/sec)   p_kst 2.857143e-06   p_cons 1   p_joint 1.142857e-04

Joint ci ratio: 6.048330e-01	ci left: 8.172983e-05	ci right 1.545000e-04	k: 41	n:360000
Cons ci ratio: 1.088883e-05	ci left: 9.999898e-01	ci right 1	k: 360000	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
POLDIP2   360000 perm   116 sec   (3111 perm/sec)   p_kst 2.777778e-06   p_cons 1   p_joint 1.138889e-04

Joint ci ratio: 6.048340e-01	ci left: 7.952089e-05	ci right 1.503244e-04	k: 41	n:370000
Cons ci ratio: 1.059454e-05	ci left: 9.999900e-01	ci right 1	k: 370000	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
POLDIP2   370000 perm   120 sec   (3079 perm/sec)   p_kst 2.702703e-06   p_cons 1   p_joint 1.108108e-04

Joint ci ratio: 5.843237e-01	ci left: 8.413403e-05	ci right 1.554389e-04	k: 44	n:380000
Cons ci ratio: 1.031574e-05	ci left: 9.999903e-01	ci right 1	k: 380000	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
POLDIP2   380000 perm   125 sec   (3048 perm/sec)   p_kst 2.631579e-06   p_cons 1   p_joint 1.157895e-04

Joint ci ratio: 5.779376e-01	ci left: 8.416354e-05	ci right 1.543907e-04	k: 45	n:390000
Cons ci ratio: 1.005123e-05	ci left: 9.999905e-01	ci right 1	k: 390000	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
POLDIP2   390000 perm   129 sec   (3019 perm/sec)   p_kst 2.564103e-06   p_cons 1   p_joint 1.153846e-04

Joint ci ratio: 5.717565e-01	ci left: 8.419565e-05	ci right 1.533909e-04	k: 46	n:400000
Cons ci ratio: 9.799951e-06	ci left: 9.999908e-01	ci right 1	k: 400000	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
POLDIP2   400000 perm   134 sec   (2990 perm/sec)   p_kst 2.500000e-06   p_cons 1   p_joint 1.150000e-04

Joint ci ratio: 5.717573e-01	ci left: 8.214206e-05	ci right 1.496498e-04	k: 46	n:410000
Cons ci ratio: 9.560929e-06	ci left: 9.999910e-01	ci right 1	k: 410000	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
POLDIP2   410000 perm   138 sec   (2962 perm/sec)   p_kst 2.439024e-06   p_cons 1   p_joint 1.121951e-04

Joint ci ratio: 6.048382e-01	ci left: 7.005400e-05	ci right 1.324290e-04	k: 41	n:420000
Cons ci ratio: 9.333289e-06	ci left: 9.999912e-01	ci right 1	k: 420000	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
POLDIP2   420000 perm   143 sec   (2933 perm/sec)   p_kst 2.380952e-06   p_cons 1   p_joint 9.761905e-05

Joint ci ratio: 6.048389e-01	ci left: 6.842481e-05	ci right 1.293493e-04	k: 41	n:430000
Cons ci ratio: 9.116237e-06	ci left: 9.999914e-01	ci right 1	k: 430000	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
POLDIP2   430000 perm   148 sec   (2905 perm/sec)   p_kst 2.325581e-06   p_cons 1   p_joint 9.534884e-05

Joint ci ratio: 5.909320e-01	ci left: 7.072659e-05	ci right 1.316358e-04	k: 43	n:440000
Cons ci ratio: 8.909050e-06	ci left: 9.999916e-01	ci right 1	k: 440000	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
POLDIP2   440000 perm   153 sec   (2878 perm/sec)   p_kst 2.272727e-06   p_cons 1   p_joint 9.772727e-05

Joint ci ratio: 5.843292e-01	ci left: 7.104635e-05	ci right 1.312599e-04	k: 44	n:450000
Cons ci ratio: 8.711072e-06	ci left: 9.999918e-01	ci right 1	k: 450000	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
POLDIP2   450000 perm   158 sec   (2851 perm/sec)   p_kst 2.222222e-06   p_cons 1   p_joint 9.777778e-05

Joint ci ratio: 5.717609e-01	ci left: 7.321347e-05	ci right 1.333838e-04	k: 46	n:460000
Cons ci ratio: 8.521702e-06	ci left: 9.999920e-01	ci right 1	k: 460000	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
POLDIP2   460000 perm   163 sec   (2823 perm/sec)   p_kst 2.173913e-06   p_cons 1   p_joint 1.000000e-04

Joint ci ratio: 5.657738e-01	ci left: 7.347713e-05	ci right 1.329766e-04	k: 47	n:470000
Cons ci ratio: 8.340390e-06	ci left: 9.999922e-01	ci right 1	k: 470000	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
POLDIP2   470000 perm   168 sec   (2796 perm/sec)   p_kst 2.127660e-06   p_cons 1   p_joint 1.000000e-04

Joint ci ratio: 5.543423e-01	ci left: 7.552274e-05	ci right 1.349574e-04	k: 49	n:480000
Cons ci ratio: 8.166633e-06	ci left: 9.999923e-01	ci right 1	k: 480000	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
POLDIP2   480000 perm   173 sec   (2769 perm/sec)   p_kst 2.083333e-06   p_cons 1   p_joint 1.020833e-04

Joint ci ratio: 5.488807e-01	ci left: 7.573758e-05	ci right 1.345259e-04	k: 50	n:490000
Cons ci ratio: 7.999967e-06	ci left: 9.999925e-01	ci right 1	k: 490000	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
POLDIP2   490000 perm   179 sec   (2743 perm/sec)   p_kst 2.040816e-06   p_cons 1   p_joint 1.020408e-04

Joint ci ratio: 5.435774e-01	ci left: 7.594661e-05	ci right 1.341090e-04	k: 51	n:500000
Cons ci ratio: 7.839969e-06	ci left: 9.999926e-01	ci right 1	k: 500000	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
POLDIP2   500000 perm   184 sec   (2715 perm/sec)   p_kst 2.000000e-06   p_cons 1   p_joint 1.020000e-04

Joint ci ratio: 5.435779e-01	ci left: 7.445745e-05	ci right 1.314795e-04	k: 51	n:510000
Cons ci ratio: 7.686244e-06	ci left: 9.999928e-01	ci right 1	k: 510000	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
POLDIP2   510000 perm   190 sec   (2688 perm/sec)   p_kst 1.960784e-06   p_cons 1   p_joint 1.000000e-04

Joint ci ratio: 5.435785e-01	ci left: 7.302556e-05	ci right 1.289511e-04	k: 51	n:520000
Cons ci ratio: 7.538433e-06	ci left: 9.999929e-01	ci right 1	k: 520000	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
POLDIP2   520000 perm   196 sec   (2659 perm/sec)   p_kst 1.923077e-06   p_cons 1   p_joint 9.807692e-05

Joint ci ratio: 5.435790e-01	ci left: 7.164770e-05	ci right 1.265180e-04	k: 51	n:530000
Cons ci ratio: 7.396199e-06	ci left: 9.999930e-01	ci right 1	k: 530000	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
POLDIP2   530000 perm   201 sec   (2633 perm/sec)   p_kst 1.886792e-06   p_cons 1   p_joint 9.622642e-05

Joint ci ratio: 5.334173e-01	ci left: 7.352054e-05	ci right 1.283783e-04	k: 53	n:540000
Cons ci ratio: 7.259232e-06	ci left: 9.999932e-01	ci right 1	k: 540000	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
POLDIP2   540000 perm   207 sec   (2609 perm/sec)   p_kst 1.851852e-06   p_cons 1   p_joint 9.814815e-05

Joint ci ratio: 5.435800e-01	ci left: 6.904230e-05	ci right 1.219175e-04	k: 51	n:550000
Cons ci ratio: 7.127247e-06	ci left: 9.999933e-01	ci right 1	k: 550000	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
POLDIP2   550000 perm   213 sec   (2585 perm/sec)   p_kst 1.818182e-06   p_cons 1   p_joint 9.272727e-05

Joint ci ratio: 5.238054e-01	ci left: 7.398927e-05	ci right 1.278375e-04	k: 55	n:560000
Cons ci ratio: 6.999975e-06	ci left: 9.999934e-01	ci right 1	k: 560000	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
POLDIP2   560000 perm   219 sec   (2562 perm/sec)   p_kst 1.785714e-06   p_cons 1   p_joint 9.821429e-05

Joint ci ratio: 5.146946e-01	ci left: 7.573988e-05	ci right 1.295597e-04	k: 57	n:570000
Cons ci ratio: 6.877169e-06	ci left: 9.999935e-01	ci right 1	k: 570000	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
POLDIP2   570000 perm   225 sec   (2538 perm/sec)   p_kst 1.754386e-06   p_cons 1   p_joint 1.000000e-04

Joint ci ratio: 5.146950e-01	ci left: 7.443400e-05	ci right 1.273259e-04	k: 57	n:580000
Cons ci ratio: 6.758597e-06	ci left: 9.999936e-01	ci right 1	k: 580000	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
POLDIP2   580000 perm   231 sec   (2512 perm/sec)   p_kst 1.724138e-06   p_cons 1   p_joint 9.827586e-05

Joint ci ratio: 5.146955e-01	ci left: 7.317239e-05	ci right 1.251679e-04	k: 57	n:590000
Cons ci ratio: 6.644045e-06	ci left: 9.999937e-01	ci right 1	k: 590000	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
POLDIP2   590000 perm   237 sec   (2484 perm/sec)   p_kst 1.694915e-06   p_cons 1   p_joint 9.661017e-05

Joint ci ratio: 5.238072e-01	ci left: 6.905660e-05	ci right 1.193151e-04	k: 55	n:600000
Cons ci ratio: 6.533312e-06	ci left: 9.999939e-01	ci right 1	k: 600000	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
POLDIP2   600000 perm   244 sec   (2460 perm/sec)   p_kst 1.666667e-06   p_cons 1   p_joint 9.166667e-05

Joint ci ratio: 5.238076e-01	ci left: 6.792451e-05	ci right 1.173592e-04	k: 55	n:610000
Cons ci ratio: 6.426208e-06	ci left: 9.999940e-01	ci right 1	k: 610000	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
POLDIP2   610000 perm   250 sec   (2438 perm/sec)   p_kst 1.639344e-06   p_cons 1   p_joint 9.016393e-05

Joint ci ratio: 5.146967e-01	ci left: 6.963176e-05	ci right 1.191115e-04	k: 57	n:620000
Cons ci ratio: 6.322560e-06	ci left: 9.999941e-01	ci right 1	k: 620000	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
POLDIP2   620000 perm   257 sec   (2415 perm/sec)   p_kst 1.612903e-06   p_cons 1   p_joint 9.193548e-05

Joint ci ratio: 5.060453e-01	ci left: 7.129206e-05	ci right 1.208011e-04	k: 59	n:630000
Cons ci ratio: 6.222202e-06	ci left: 9.999941e-01	ci right 1	k: 630000	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
POLDIP2   630000 perm   263 sec   (2393 perm/sec)   p_kst 1.587302e-06   p_cons 1   p_joint 9.365079e-05

Joint ci ratio: 5.018803e-01	ci left: 7.154187e-05	ci right 1.206732e-04	k: 60	n:640000
Cons ci ratio: 6.124981e-06	ci left: 9.999942e-01	ci right 1	k: 640000	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
POLDIP2   640000 perm   270 sec   (2370 perm/sec)   p_kst 1.562500e-06   p_cons 1   p_joint 9.375000e-05

Joint ci ratio: 5.060461e-01	ci left: 6.909844e-05	ci right 1.170842e-04	k: 59	n:650000
Cons ci ratio: 6.030751e-06	ci left: 9.999943e-01	ci right 1	k: 650000	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
POLDIP2   650000 perm   277 sec   (2349 perm/sec)   p_kst 1.538462e-06   p_cons 1   p_joint 9.076923e-05

Joint ci ratio: 5.238094e-01	ci left: 6.277867e-05	ci right 1.084684e-04	k: 55	n:660000
Cons ci ratio: 5.939376e-06	ci left: 9.999944e-01	ci right 1	k: 660000	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
POLDIP2   660000 perm   283 sec   (2329 perm/sec)   p_kst 1.515152e-06   p_cons 1   p_joint 8.333333e-05

Joint ci ratio: 5.191942e-01	ci left: 6.313761e-05	ci right 1.085369e-04	k: 56	n:670000
Cons ci ratio: 5.850729e-06	ci left: 9.999945e-01	ci right 1	k: 670000	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
POLDIP2   670000 perm   290 sec   (2310 perm/sec)   p_kst 1.492537e-06   p_cons 1   p_joint 8.358209e-05

Joint ci ratio: 5.103180e-01	ci left: 6.476802e-05	ci right 1.102610e-04	k: 58	n:680000
Cons ci ratio: 5.764689e-06	ci left: 9.999946e-01	ci right 1	k: 680000	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
POLDIP2   680000 perm   297 sec   (2291 perm/sec)   p_kst 1.470588e-06   p_cons 1   p_joint 8.529412e-05

Joint ci ratio: 5.018820e-01	ci left: 6.635762e-05	ci right 1.119289e-04	k: 60	n:690000
Cons ci ratio: 5.681143e-06	ci left: 9.999947e-01	ci right 1	k: 690000	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
POLDIP2   690000 perm   304 sec   (2268 perm/sec)   p_kst 1.449275e-06   p_cons 1   p_joint 8.695652e-05

Joint ci ratio: 5.018823e-01	ci left: 6.540965e-05	ci right 1.103299e-04	k: 60	n:700000
Cons ci ratio: 5.599984e-06	ci left: 9.999947e-01	ci right 1	k: 700000	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
POLDIP2   700000 perm   311 sec   (2250 perm/sec)   p_kst 1.428571e-06   p_cons 1   p_joint 8.571429e-05

Joint ci ratio: 5.717714e-01	ci left: 4.743387e-05	ci right 8.641816e-05	k: 46	n:710000
Cons ci ratio: 5.521111e-06	ci left: 9.999948e-01	ci right 1	k: 710000	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
POLDIP2   710000 perm   318 sec   (2233 perm/sec)   p_kst 1.408451e-06   p_cons 1   p_joint 6.478873e-05

Joint ci ratio: 5.657840e-01	ci left: 4.796404e-05	ci right 8.680467e-05	k: 47	n:720000
Cons ci ratio: 5.444429e-06	ci left: 9.999949e-01	ci right 1	k: 720000	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
POLDIP2   720000 perm   325 sec   (2215 perm/sec)   p_kst 1.388889e-06   p_cons 1   p_joint 6.527778e-05

Joint ci ratio: 5.543524e-01	ci left: 4.965858e-05	ci right 8.873959e-05	k: 49	n:730000
Cons ci ratio: 5.369848e-06	ci left: 9.999949e-01	ci right 1	k: 730000	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
POLDIP2   730000 perm   332 sec   (2198 perm/sec)   p_kst 1.369863e-06   p_cons 1   p_joint 6.712329e-05

Joint ci ratio: 5.488905e-01	ci left: 5.015035e-05	ci right 8.907846e-05	k: 50	n:740000
Cons ci ratio: 5.297283e-06	ci left: 9.999950e-01	ci right 1	k: 740000	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
POLDIP2   740000 perm   339 sec   (2180 perm/sec)   p_kst 1.351351e-06   p_cons 1   p_joint 6.756757e-05

Joint ci ratio: 5.488908e-01	ci left: 4.948168e-05	ci right 8.789076e-05	k: 50	n:750000
Cons ci ratio: 5.226653e-06	ci left: 9.999951e-01	ci right 1	k: 750000	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
POLDIP2   750000 perm   347 sec   (2163 perm/sec)   p_kst 1.333333e-06   p_cons 1   p_joint 6.666667e-05

Joint ci ratio: 5.488910e-01	ci left: 4.883060e-05	ci right 8.673431e-05	k: 50	n:760000
Cons ci ratio: 5.157881e-06	ci left: 9.999951e-01	ci right 1	k: 760000	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
POLDIP2   760000 perm   354 sec   (2146 perm/sec)   p_kst 1.315789e-06   p_cons 1   p_joint 6.578947e-05

Joint ci ratio: 5.488913e-01	ci left: 4.819643e-05	ci right 8.560790e-05	k: 50	n:770000
Cons ci ratio: 5.090896e-06	ci left: 9.999952e-01	ci right 1	k: 770000	n:770000
KS ci ratio: 2.771853e+00	ci left: 3.288027e-08	ci right 7.235879e-06	k: 1	n:770000
POLDIP2   770000 perm   362 sec   (2130 perm/sec)   p_kst 1.298701e-06   p_cons 1   p_joint 6.493506e-05

Joint ci ratio: 5.384348e-01	ci left: 4.979024e-05	ci right 8.742356e-05	k: 52	n:780000
Cons ci ratio: 5.025628e-06	ci left: 9.999953e-01	ci right 1	k: 780000	n:780000
KS ci ratio: 2.771853e+00	ci left: 3.245873e-08	ci right 7.143112e-06	k: 1	n:780000
POLDIP2   780000 perm   369 sec   (2114 perm/sec)   p_kst 1.282051e-06   p_cons 1   p_joint 6.666667e-05

Joint ci ratio: 5.334259e-01	ci left: 5.025436e-05	ci right 8.775264e-05	k: 53	n:790000
Cons ci ratio: 4.962013e-06	ci left: 9.999953e-01	ci right 1	k: 790000	n:790000
KS ci ratio: 2.771853e+00	ci left: 3.204786e-08	ci right 7.052693e-06	k: 1	n:790000
POLDIP2   790000 perm   376 sec   (2098 perm/sec)   p_kst 1.265823e-06   p_cons 1   p_joint 6.708861e-05

Joint ci ratio: 5.334261e-01	ci left: 4.962618e-05	ci right 8.665575e-05	k: 53	n:800000
Cons ci ratio: 4.899988e-06	ci left: 9.999954e-01	ci right 1	k: 800000	n:800000
KS ci ratio: 2.771853e+00	ci left: 3.164726e-08	ci right 6.964534e-06	k: 1	n:800000
POLDIP2   800000 perm   384 sec   (2083 perm/sec)   p_kst 1.250000e-06   p_cons 1   p_joint 6.625000e-05

Joint ci ratio: 5.285544e-01	ci left: 5.008244e-05	ci right 8.698466e-05	k: 54	n:810000
Cons ci ratio: 4.839494e-06	ci left: 9.999954e-01	ci right 1	k: 810000	n:810000
KS ci ratio: 2.771853e+00	ci left: 3.125655e-08	ci right 6.878553e-06	k: 1	n:810000
POLDIP2   810000 perm   392 sec   (2067 perm/sec)   p_kst 1.234568e-06   p_cons 1   p_joint 6.666667e-05

Joint ci ratio: 5.285546e-01	ci left: 4.947167e-05	ci right 8.592388e-05	k: 54	n:820000
Cons ci ratio: 4.780476e-06	ci left: 9.999955e-01	ci right 1	k: 820000	n:820000
KS ci ratio: 2.771854e+00	ci left: 3.087538e-08	ci right 6.794668e-06	k: 1	n:820000
POLDIP2   820000 perm   400 sec   (2052 perm/sec)   p_kst 1.219512e-06   p_cons 1   p_joint 6.585366e-05

Joint ci ratio: 5.285549e-01	ci left: 4.887562e-05	ci right 8.488866e-05	k: 54	n:830000
Cons ci ratio: 4.722880e-06	ci left: 9.999956e-01	ci right 1	k: 830000	n:830000
KS ci ratio: 2.771854e+00	ci left: 3.050338e-08	ci right 6.712805e-06	k: 1	n:830000
POLDIP2   830000 perm   408 sec   (2037 perm/sec)   p_kst 1.204819e-06   p_cons 1   p_joint 6.506024e-05

Joint ci ratio: 5.285551e-01	ci left: 4.829376e-05	ci right 8.387809e-05	k: 54	n:840000
Cons ci ratio: 4.666656e-06	ci left: 9.999956e-01	ci right 1	k: 840000	n:840000
KS ci ratio: 2.771854e+00	ci left: 3.014025e-08	ci right 6.632891e-06	k: 1	n:840000
POLDIP2   840000 perm   415 sec   (2022 perm/sec)   p_kst 1.190476e-06   p_cons 1   p_joint 6.428571e-05

Joint ci ratio: 5.238145e-01	ci left: 4.874569e-05	ci right 8.422278e-05	k: 55	n:850000
Cons ci ratio: 4.611754e-06	ci left: 9.999957e-01	ci right 1	k: 850000	n:850000
KS ci ratio: 2.771854e+00	ci left: 2.978566e-08	ci right 6.554857e-06	k: 1	n:850000
POLDIP2   850000 perm   423 sec   (2007 perm/sec)   p_kst 1.176471e-06   p_cons 1   p_joint 6.470588e-05

Joint ci ratio: 5.238147e-01	ci left: 4.817887e-05	ci right 8.324345e-05	k: 55	n:860000
Cons ci ratio: 4.558129e-06	ci left: 9.999957e-01	ci right 1	k: 860000	n:860000
KS ci ratio: 2.771854e+00	ci left: 2.943931e-08	ci right 6.478638e-06	k: 1	n:860000
POLDIP2   860000 perm   432 sec   (1993 perm/sec)   p_kst 1.162791e-06   p_cons 1   p_joint 6.395349e-05

Joint ci ratio: 5.191994e-01	ci left: 4.862311e-05	ci right 8.358616e-05	k: 56	n:870000
Cons ci ratio: 4.505737e-06	ci left: 9.999958e-01	ci right 1	k: 870000	n:870000
KS ci ratio: 2.771854e+00	ci left: 2.910093e-08	ci right 6.404171e-06	k: 1	n:870000
POLDIP2   870000 perm   440 sec   (1979 perm/sec)   p_kst 1.149425e-06   p_cons 1   p_joint 6.436782e-05

Joint ci ratio: 5.191996e-01	ci left: 4.807057e-05	ci right 8.263633e-05	k: 56	n:880000
Cons ci ratio: 4.454535e-06	ci left: 9.999958e-01	ci right 1	k: 880000	n:880000
KS ci ratio: 2.771854e+00	ci left: 2.877024e-08	ci right 6.331396e-06	k: 1	n:880000
POLDIP2   880000 perm   448 sec   (1965 perm/sec)   p_kst 1.136364e-06   p_cons 1   p_joint 6.363636e-05

Joint ci ratio: 5.191998e-01	ci left: 4.753045e-05	ci right 8.170784e-05	k: 56	n:890000
Cons ci ratio: 4.404484e-06	ci left: 9.999959e-01	ci right 1	k: 890000	n:890000
KS ci ratio: 2.771854e+00	ci left: 2.844697e-08	ci right 6.260257e-06	k: 1	n:890000
POLDIP2   890000 perm   456 sec   (1951 perm/sec)   p_kst 1.123596e-06   p_cons 1   p_joint 6.292135e-05

Joint ci ratio: 5.147043e-01	ci left: 4.796839e-05	ci right 8.205491e-05	k: 57	n:900000
Cons ci ratio: 4.355546e-06	ci left: 9.999959e-01	ci right 1	k: 900000	n:900000
KS ci ratio: 2.771854e+00	ci left: 2.813090e-08	ci right 6.190699e-06	k: 1	n:900000
POLDIP2   900000 perm   464 sec   (1938 perm/sec)   p_kst 1.111111e-06   p_cons 1   p_joint 6.333333e-05

Joint ci ratio: 5.147045e-01	ci left: 4.744126e-05	ci right 8.115322e-05	k: 57	n:910000
Cons ci ratio: 4.307683e-06	ci left: 9.999959e-01	ci right 1	k: 910000	n:910000
KS ci ratio: 2.771854e+00	ci left: 2.782177e-08	ci right 6.122670e-06	k: 1	n:910000
POLDIP2   910000 perm   473 sec   (1924 perm/sec)   p_kst 1.098901e-06   p_cons 1   p_joint 6.263736e-05

Joint ci ratio: 5.147047e-01	ci left: 4.692559e-05	ci right 8.027113e-05	k: 57	n:920000
Cons ci ratio: 4.260860e-06	ci left: 9.999960e-01	ci right 1	k: 920000	n:920000
KS ci ratio: 2.771854e+00	ci left: 2.751936e-08	ci right 6.056119e-06	k: 1	n:920000
POLDIP2   920000 perm   482 sec   (1911 perm/sec)   p_kst 1.086957e-06   p_cons 1   p_joint 6.195652e-05

Joint ci ratio: 5.018878e-01	ci left: 4.923295e-05	ci right 8.304428e-05	k: 60	n:930000
Cons ci ratio: 4.215045e-06	ci left: 9.999960e-01	ci right 1	k: 930000	n:930000
KS ci ratio: 2.771854e+00	ci left: 2.722345e-08	ci right 5.991000e-06	k: 1	n:930000
POLDIP2   930000 perm   490 sec   (1897 perm/sec)   p_kst 1.075269e-06   p_cons 1   p_joint 6.451613e-05

Joint ci ratio: 5.018880e-01	ci left: 4.870919e-05	ci right 8.216084e-05	k: 60	n:940000
Cons ci ratio: 4.170204e-06	ci left: 9.999961e-01	ci right 1	k: 940000	n:940000
KS ci ratio: 2.771854e+00	ci left: 2.693384e-08	ci right 5.927266e-06	k: 1	n:940000
POLDIP2   940000 perm   499 sec   (1884 perm/sec)   p_kst 1.063830e-06   p_cons 1   p_joint 6.382979e-05

Joint ci ratio: 4.978240e-01	ci left: 4.911631e-05	ci right 8.248035e-05	k: 61	n:950000
Cons ci ratio: 4.126307e-06	ci left: 9.999961e-01	ci right 1	k: 950000	n:950000
KS ci ratio: 2.771854e+00	ci left: 2.665032e-08	ci right 5.864874e-06	k: 1	n:950000
POLDIP2   950000 perm   508 sec   (1872 perm/sec)   p_kst 1.052632e-06   p_cons 1   p_joint 6.421053e-05

Joint ci ratio: 4.938571e-01	ci left: 4.951602e-05	ci right 8.279216e-05	k: 62	n:960000
Cons ci ratio: 4.083325e-06	ci left: 9.999962e-01	ci right 1	k: 960000	n:960000
KS ci ratio: 2.771854e+00	ci left: 2.637272e-08	ci right 5.803781e-06	k: 1	n:960000
POLDIP2   960000 perm   516 sec   (1860 perm/sec)   p_kst 1.041667e-06   p_cons 1   p_joint 6.458333e-05

Joint ci ratio: 4.938573e-01	ci left: 4.900554e-05	ci right 8.193865e-05	k: 62	n:970000
Cons ci ratio: 4.041229e-06	ci left: 9.999962e-01	ci right 1	k: 970000	n:970000
KS ci ratio: 2.771854e+00	ci left: 2.610083e-08	ci right 5.743949e-06	k: 1	n:970000
POLDIP2   970000 perm   525 sec   (1848 perm/sec)   p_kst 1.030928e-06   p_cons 1   p_joint 6.391753e-05

Joint ci ratio: 4.861998e-01	ci left: 5.029402e-05	ci right 8.339371e-05	k: 64	n:980000
Cons ci ratio: 3.999992e-06	ci left: 9.999962e-01	ci right 1	k: 980000	n:980000
KS ci ratio: 2.771854e+00	ci left: 2.583450e-08	ci right 5.685337e-06	k: 1	n:980000
POLDIP2   980000 perm   534 sec   (1835 perm/sec)   p_kst 1.020408e-06   p_cons 1   p_joint 6.530612e-05

Joint ci ratio: 4.899839e-01	ci left: 4.890026e-05	ci right 8.141783e-05	k: 63	n:990000
Cons ci ratio: 3.959588e-06	ci left: 9.999963e-01	ci right 1	k: 990000	n:990000
KS ci ratio: 2.771854e+00	ci left: 2.557354e-08	ci right 5.627910e-06	k: 1	n:990000
POLDIP2   990000 perm   543 sec   (1822 perm/sec)   p_kst 1.010101e-06   p_cons 1   p_joint 6.363636e-05

Joint ci ratio: 4.899841e-01	ci left: 4.841126e-05	ci right 8.060366e-05	k: 63	n:1000000
Cons ci ratio: 3.919992e-06	ci left: 9.999963e-01	ci right 1	k: 1000000	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
POLDIP2   1000000 perm   552 sec   (1810 perm/sec)   p_kst 1.000000e-06   p_cons 1   p_joint 6.300000e-05

Joint ci ratio: 4.825026e-01	ci left: 4.966928e-05	ci right 8.202684e-05	k: 65	n:1010000
Cons ci ratio: 3.881180e-06	ci left: 9.999963e-01	ci right 1	k: 1010000	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
POLDIP2   1010000 perm   562 sec   (1799 perm/sec)   p_kst 9.900990e-07   p_cons 1   p_joint 6.435644e-05

Joint ci ratio: 4.788883e-01	ci left: 5.004387e-05	ci right 8.232102e-05	k: 66	n:1020000
Cons ci ratio: 3.843130e-06	ci left: 9.999964e-01	ci right 1	k: 1020000	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
POLDIP2   1020000 perm   571 sec   (1787 perm/sec)   p_kst 9.803922e-07   p_cons 1   p_joint 6.470588e-05

Joint ci ratio: 4.788884e-01	ci left: 4.955800e-05	ci right 8.152180e-05	k: 66	n:1030000
Cons ci ratio: 3.805818e-06	ci left: 9.999964e-01	ci right 1	k: 1030000	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
POLDIP2   1030000 perm   580 sec   (1775 perm/sec)   p_kst 9.708738e-07   p_cons 1   p_joint 6.407767e-05

Joint ci ratio: 4.788886e-01	ci left: 4.908148e-05	ci right 8.073794e-05	k: 66	n:1040000
Cons ci ratio: 3.769224e-06	ci left: 9.999965e-01	ci right 1	k: 1040000	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
POLDIP2   1040000 perm   590 sec   (1764 perm/sec)   p_kst 9.615385e-07   p_cons 1   p_joint 6.346154e-05

Joint ci ratio: 4.788887e-01	ci left: 4.861403e-05	ci right 7.996901e-05	k: 66	n:1050000
Cons ci ratio: 3.733326e-06	ci left: 9.999965e-01	ci right 1	k: 1050000	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
POLDIP2   1050000 perm   599 sec   (1753 perm/sec)   p_kst 9.523810e-07   p_cons 1   p_joint 6.285714e-05

Joint ci ratio: 4.788889e-01	ci left: 4.815541e-05	ci right 7.921460e-05	k: 66	n:1060000
Cons ci ratio: 3.698106e-06	ci left: 9.999965e-01	ci right 1	k: 1060000	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
POLDIP2   1060000 perm   609 sec   (1741 perm/sec)   p_kst 9.433962e-07   p_cons 1   p_joint 6.226415e-05

Joint ci ratio: 4.978258e-01	ci left: 4.360790e-05	ci right 7.323030e-05	k: 61	n:1070000
Cons ci ratio: 3.663545e-06	ci left: 9.999966e-01	ci right 1	k: 1070000	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
POLDIP2   1070000 perm   618 sec   (1730 perm/sec)   p_kst 9.345794e-07   p_cons 1   p_joint 5.700935e-05

Joint ci ratio: 4.978260e-01	ci left: 4.320412e-05	ci right 7.255224e-05	k: 61	n:1080000
Cons ci ratio: 3.629623e-06	ci left: 9.999966e-01	ci right 1	k: 1080000	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
POLDIP2   1080000 perm   628 sec   (1719 perm/sec)   p_kst 9.259259e-07   p_cons 1   p_joint 5.648148e-05

Joint ci ratio: 4.978261e-01	ci left: 4.280775e-05	ci right 7.188663e-05	k: 61	n:1090000
Cons ci ratio: 3.596324e-06	ci left: 9.999966e-01	ci right 1	k: 1090000	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
POLDIP2   1090000 perm   638 sec   (1709 perm/sec)   p_kst 9.174312e-07   p_cons 1   p_joint 5.596330e-05

Joint ci ratio: 5.060558e-01	ci left: 4.083073e-05	ci right 6.918646e-05	k: 59	n:1100000
Cons ci ratio: 3.563630e-06	ci left: 9.999966e-01	ci right 1	k: 1100000	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
POLDIP2   1100000 perm   648 sec   (1698 perm/sec)   p_kst 9.090909e-07   p_cons 1   p_joint 5.363636e-05

Joint ci ratio: 5.018906e-01	ci left: 4.124918e-05	ci right 6.957774e-05	k: 60	n:1110000
Cons ci ratio: 3.531525e-06	ci left: 9.999967e-01	ci right 1	k: 1110000	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
POLDIP2   1110000 perm   658 sec   (1688 perm/sec)   p_kst 9.009009e-07   p_cons 1   p_joint 5.405405e-05

Joint ci ratio: 5.018907e-01	ci left: 4.088088e-05	ci right 6.895652e-05	k: 60	n:1120000
Cons ci ratio: 3.499994e-06	ci left: 9.999967e-01	ci right 1	k: 1120000	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
POLDIP2   1120000 perm   668 sec   (1678 perm/sec)   p_kst 8.928571e-07   p_cons 1   p_joint 5.357143e-05

Joint ci ratio: 4.978266e-01	ci left: 4.129243e-05	ci right 6.934199e-05	k: 61	n:1130000
Cons ci ratio: 3.469020e-06	ci left: 9.999967e-01	ci right 1	k: 1130000	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
POLDIP2   1130000 perm   678 sec   (1667 perm/sec)   p_kst 8.849558e-07   p_cons 1   p_joint 5.398230e-05

Joint ci ratio: 4.862021e-01	ci left: 4.323517e-05	ci right 7.168942e-05	k: 64	n:1140000
Cons ci ratio: 3.438590e-06	ci left: 9.999968e-01	ci right 1	k: 1140000	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
POLDIP2   1140000 perm   688 sec   (1658 perm/sec)   p_kst 8.771930e-07   p_cons 1   p_joint 5.614035e-05

Joint ci ratio: 4.862022e-01	ci left: 4.285921e-05	ci right 7.106604e-05	k: 64	n:1150000
Cons ci ratio: 3.408690e-06	ci left: 9.999968e-01	ci right 1	k: 1150000	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
POLDIP2   1150000 perm   698 sec   (1648 perm/sec)   p_kst 8.695652e-07   p_cons 1   p_joint 5.565217e-05

Joint ci ratio: 4.862023e-01	ci left: 4.248973e-05	ci right 7.045340e-05	k: 64	n:1160000
Cons ci ratio: 3.379305e-06	ci left: 9.999968e-01	ci right 1	k: 1160000	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
POLDIP2   1160000 perm   708 sec   (1638 perm/sec)   p_kst 8.620690e-07   p_cons 1   p_joint 5.517241e-05

Joint ci ratio: 5.192038e-01	ci left: 3.615558e-05	ci right 6.215396e-05	k: 56	n:1170000
Cons ci ratio: 3.350422e-06	ci left: 9.999968e-01	ci right 1	k: 1170000	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
POLDIP2   1170000 perm   719 sec   (1628 perm/sec)   p_kst 8.547009e-07   p_cons 1   p_joint 4.786325e-05

Joint ci ratio: 5.147083e-01	ci left: 3.658600e-05	ci right 6.258439e-05	k: 57	n:1180000
Cons ci ratio: 3.322028e-06	ci left: 9.999969e-01	ci right 1	k: 1180000	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
POLDIP2   1180000 perm   729 sec   (1619 perm/sec)   p_kst 8.474576e-07   p_cons 1   p_joint 4.830508e-05

Joint ci ratio: 5.147085e-01	ci left: 3.627855e-05	ci right 6.205848e-05	k: 57	n:1190000
Cons ci ratio: 3.294112e-06	ci left: 9.999969e-01	ci right 1	k: 1190000	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
POLDIP2   1190000 perm   740 sec   (1609 perm/sec)   p_kst 8.403361e-07   p_cons 1   p_joint 4.789916e-05

Joint ci ratio: 5.334322e-01	ci left: 3.308403e-05	ci right 5.777069e-05	k: 53	n:1200000
Cons ci ratio: 3.266661e-06	ci left: 9.999969e-01	ci right 1	k: 1200000	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
POLDIP2   1200000 perm   750 sec   (1600 perm/sec)   p_kst 8.333333e-07   p_cons 1   p_joint 4.416667e-05

Joint ci ratio: 5.238197e-01	ci left: 3.424276e-05	ci right 5.916493e-05	k: 55	n:1210000
Cons ci ratio: 3.239664e-06	ci left: 9.999970e-01	ci right 1	k: 1210000	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
POLDIP2   1210000 perm   761 sec   (1590 perm/sec)   p_kst 8.264463e-07   p_cons 1   p_joint 4.545455e-05

Joint ci ratio: 5.238198e-01	ci left: 3.396208e-05	ci right 5.867998e-05	k: 55	n:1220000
Cons ci ratio: 3.213109e-06	ci left: 9.999970e-01	ci right 1	k: 1220000	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
POLDIP2   1220000 perm   772 sec   (1581 perm/sec)   p_kst 8.196721e-07   p_cons 1   p_joint 4.508197e-05

Joint ci ratio: 5.238199e-01	ci left: 3.368597e-05	ci right 5.820291e-05	k: 55	n:1230000
Cons ci ratio: 3.186987e-06	ci left: 9.999970e-01	ci right 1	k: 1230000	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
POLDIP2   1230000 perm   783 sec   (1571 perm/sec)   p_kst 8.130081e-07   p_cons 1   p_joint 4.471545e-05

Joint ci ratio: 5.192045e-01	ci left: 3.411453e-05	ci right 5.864530e-05	k: 56	n:1240000
Cons ci ratio: 3.161285e-06	ci left: 9.999970e-01	ci right 1	k: 1240000	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
POLDIP2   1240000 perm   794 sec   (1562 perm/sec)   p_kst 8.064516e-07   p_cons 1   p_joint 4.516129e-05

Joint ci ratio: 5.147091e-01	ci left: 3.453717e-05	ci right 5.907969e-05	k: 57	n:1250000
Cons ci ratio: 3.135995e-06	ci left: 9.999970e-01	ci right 1	k: 1250000	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
POLDIP2   1250000 perm   805 sec   (1553 perm/sec)   p_kst 8.000000e-07   p_cons 1   p_joint 4.560000e-05

Joint ci ratio: 5.147092e-01	ci left: 3.426307e-05	ci right 5.861081e-05	k: 57	n:1260000
Cons ci ratio: 3.111106e-06	ci left: 9.999971e-01	ci right 1	k: 1260000	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
POLDIP2   1260000 perm   816 sec   (1544 perm/sec)   p_kst 7.936508e-07   p_cons 1   p_joint 4.523810e-05

Joint ci ratio: 5.147093e-01	ci left: 3.399328e-05	ci right 5.814931e-05	k: 57	n:1270000
Cons ci ratio: 3.086609e-06	ci left: 9.999971e-01	ci right 1	k: 1270000	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
POLDIP2   1270000 perm   828 sec   (1535 perm/sec)   p_kst 7.874016e-07   p_cons 1   p_joint 4.488189e-05

Joint ci ratio: 5.103286e-01	ci left: 3.440786e-05	ci right 5.857653e-05	k: 58	n:1280000
Cons ci ratio: 3.062495e-06	ci left: 9.999971e-01	ci right 1	k: 1280000	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
POLDIP2   1280000 perm   839 sec   (1526 perm/sec)   p_kst 7.812500e-07   p_cons 1   p_joint 4.531250e-05

Joint ci ratio: 5.103287e-01	ci left: 3.414113e-05	ci right 5.812245e-05	k: 58	n:1290000
Cons ci ratio: 3.038755e-06	ci left: 9.999971e-01	ci right 1	k: 1290000	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
POLDIP2   1290000 perm   850 sec   (1518 perm/sec)   p_kst 7.751938e-07   p_cons 1   p_joint 4.496124e-05

Joint ci ratio: 5.103288e-01	ci left: 3.387850e-05	ci right 5.767535e-05	k: 58	n:1300000
Cons ci ratio: 3.015380e-06	ci left: 9.999972e-01	ci right 1	k: 1300000	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
POLDIP2   1300000 perm   861 sec   (1509 perm/sec)   p_kst 7.692308e-07   p_cons 1   p_joint 4.461538e-05

Joint ci ratio: 5.060580e-01	ci left: 3.428531e-05	ci right 5.809558e-05	k: 59	n:1310000
Cons ci ratio: 2.992362e-06	ci left: 9.999972e-01	ci right 1	k: 1310000	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
POLDIP2   1310000 perm   873 sec   (1501 perm/sec)   p_kst 7.633588e-07   p_cons 1   p_joint 4.503817e-05

Joint ci ratio: 5.060581e-01	ci left: 3.402557e-05	ci right 5.765546e-05	k: 59	n:1320000
Cons ci ratio: 2.969692e-06	ci left: 9.999972e-01	ci right 1	k: 1320000	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
POLDIP2   1320000 perm   884 sec   (1493 perm/sec)   p_kst 7.575758e-07   p_cons 1   p_joint 4.469697e-05

Joint ci ratio: 4.978287e-01	ci left: 3.508301e-05	ci right 5.891469e-05	k: 61	n:1330000
Cons ci ratio: 2.947364e-06	ci left: 9.999972e-01	ci right 1	k: 1330000	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
POLDIP2   1330000 perm   896 sec   (1484 perm/sec)   p_kst 7.518797e-07   p_cons 1   p_joint 4.586466e-05

Joint ci ratio: 4.978288e-01	ci left: 3.482119e-05	ci right 5.847503e-05	k: 61	n:1340000
Cons ci ratio: 2.925369e-06	ci left: 9.999972e-01	ci right 1	k: 1340000	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
POLDIP2   1340000 perm   908 sec   (1476 perm/sec)   p_kst 7.462687e-07   p_cons 1   p_joint 4.552239e-05

Joint ci ratio: 4.978289e-01	ci left: 3.456326e-05	ci right 5.804189e-05	k: 61	n:1350000
Cons ci ratio: 2.903699e-06	ci left: 9.999973e-01	ci right 1	k: 1350000	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
POLDIP2   1350000 perm   919 sec   (1468 perm/sec)   p_kst 7.407407e-07   p_cons 1   p_joint 4.518519e-05

Joint ci ratio: 5.060585e-01	ci left: 3.302482e-05	ci right 5.595972e-05	k: 59	n:1360000
Cons ci ratio: 2.882349e-06	ci left: 9.999973e-01	ci right 1	k: 1360000	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
POLDIP2   1360000 perm   931 sec   (1460 perm/sec)   p_kst 7.352941e-07   p_cons 1   p_joint 4.338235e-05

Joint ci ratio: 5.060586e-01	ci left: 3.278376e-05	ci right 5.555126e-05	k: 59	n:1370000
Cons ci ratio: 2.861310e-06	ci left: 9.999973e-01	ci right 1	k: 1370000	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
POLDIP2   1370000 perm   943 sec   (1453 perm/sec)   p_kst 7.299270e-07   p_cons 1   p_joint 4.306569e-05

Joint ci ratio: 5.060586e-01	ci left: 3.254619e-05	ci right 5.514872e-05	k: 59	n:1380000
Cons ci ratio: 2.840576e-06	ci left: 9.999973e-01	ci right 1	k: 1380000	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
POLDIP2   1380000 perm   955 sec   (1445 perm/sec)   p_kst 7.246377e-07   p_cons 1   p_joint 4.275362e-05

Joint ci ratio: 5.018934e-01	ci left: 3.293996e-05	ci right 5.556217e-05	k: 60	n:1390000
Cons ci ratio: 2.820140e-06	ci left: 9.999973e-01	ci right 1	k: 1390000	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
POLDIP2   1390000 perm   967 sec   (1437 perm/sec)   p_kst 7.194245e-07   p_cons 1   p_joint 4.316547e-05

Joint ci ratio: 5.018935e-01	ci left: 3.270467e-05	ci right 5.516530e-05	k: 60	n:1400000
Cons ci ratio: 2.799996e-06	ci left: 9.999974e-01	ci right 1	k: 1400000	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
POLDIP2   1400000 perm   979 sec   (1430 perm/sec)   p_kst 7.142857e-07   p_cons 1   p_joint 4.285714e-05

Joint ci ratio: 4.978294e-01	ci left: 3.309247e-05	ci right 5.557204e-05	k: 61	n:1410000
Cons ci ratio: 2.780138e-06	ci left: 9.999974e-01	ci right 1	k: 1410000	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
POLDIP2   1410000 perm   992 sec   (1422 perm/sec)   p_kst 7.092199e-07   p_cons 1   p_joint 4.326241e-05

Joint ci ratio: 4.938624e-01	ci left: 3.347554e-05	ci right 5.597233e-05	k: 62	n:1420000
Cons ci ratio: 2.760559e-06	ci left: 9.999974e-01	ci right 1	k: 1420000	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
POLDIP2   1420000 perm   1004 sec   (1414 perm/sec)   p_kst 7.042254e-07   p_cons 1   p_joint 4.366197e-05

Joint ci ratio: 4.938625e-01	ci left: 3.324145e-05	ci right 5.558092e-05	k: 62	n:1430000
Cons ci ratio: 2.741255e-06	ci left: 9.999974e-01	ci right 1	k: 1430000	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
POLDIP2   1430000 perm   1017 sec   (1407 perm/sec)   p_kst 6.993007e-07   p_cons 1   p_joint 4.335664e-05

Joint ci ratio: 4.938626e-01	ci left: 3.301060e-05	ci right 5.519494e-05	k: 62	n:1440000
Cons ci ratio: 2.722218e-06	ci left: 9.999974e-01	ci right 1	k: 1440000	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
POLDIP2   1440000 perm   1029 sec   (1399 perm/sec)   p_kst 6.944444e-07   p_cons 1   p_joint 4.305556e-05

Joint ci ratio: 4.899890e-01	ci left: 3.338700e-05	ci right 5.558888e-05	k: 63	n:1450000
Cons ci ratio: 2.703445e-06	ci left: 9.999975e-01	ci right 1	k: 1450000	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
POLDIP2   1450000 perm   1042 sec   (1392 perm/sec)   p_kst 6.896552e-07   p_cons 1   p_joint 4.344828e-05

Joint ci ratio: 4.899891e-01	ci left: 3.315833e-05	ci right 5.520814e-05	k: 63	n:1460000
Cons ci ratio: 2.684928e-06	ci left: 9.999975e-01	ci right 1	k: 1460000	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
POLDIP2   1460000 perm   1055 sec   (1385 perm/sec)   p_kst 6.849315e-07   p_cons 1   p_joint 4.315068e-05

Joint ci ratio: 4.899892e-01	ci left: 3.293276e-05	ci right 5.483257e-05	k: 63	n:1470000
Cons ci ratio: 2.666663e-06	ci left: 9.999975e-01	ci right 1	k: 1470000	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
POLDIP2   1470000 perm   1067 sec   (1377 perm/sec)   p_kst 6.802721e-07   p_cons 1   p_joint 4.285714e-05

Joint ci ratio: 4.862053e-01	ci left: 3.330272e-05	ci right 5.522033e-05	k: 64	n:1480000
Cons ci ratio: 2.648645e-06	ci left: 9.999975e-01	ci right 1	k: 1480000	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
POLDIP2   1480000 perm   1080 sec   (1370 perm/sec)   p_kst 6.756757e-07   p_cons 1   p_joint 4.324324e-05

Joint ci ratio: 4.862054e-01	ci left: 3.307921e-05	ci right 5.484972e-05	k: 64	n:1490000
Cons ci ratio: 2.630869e-06	ci left: 9.999975e-01	ci right 1	k: 1490000	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
POLDIP2   1490000 perm   1093 sec   (1363 perm/sec)   p_kst 6.711409e-07   p_cons 1   p_joint 4.295302e-05

Joint ci ratio: 4.862055e-01	ci left: 3.285868e-05	ci right 5.448406e-05	k: 64	n:1500000
Cons ci ratio: 2.613330e-06	ci left: 9.999975e-01	ci right 1	k: 1500000	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
POLDIP2   1500000 perm   1106 sec   (1356 perm/sec)   p_kst 6.666667e-07   p_cons 1   p_joint 4.266667e-05

Joint ci ratio: 4.753590e-01	ci left: 3.438697e-05	ci right 5.634909e-05	k: 67	n:1510000
Cons ci ratio: 2.596023e-06	ci left: 9.999976e-01	ci right 1	k: 1510000	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
POLDIP2   1510000 perm   1120 sec   (1349 perm/sec)   p_kst 6.622517e-07   p_cons 1   p_joint 4.437086e-05

Joint ci ratio: 4.753590e-01	ci left: 3.416074e-05	ci right 5.597837e-05	k: 67	n:1520000
Cons ci ratio: 2.578944e-06	ci left: 9.999976e-01	ci right 1	k: 1520000	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
POLDIP2   1520000 perm   1132 sec   (1342 perm/sec)   p_kst 6.578947e-07   p_cons 1   p_joint 4.407895e-05

Joint ci ratio: 4.719017e-01	ci left: 3.451301e-05	ci right 5.634359e-05	k: 68	n:1530000
Cons ci ratio: 2.562088e-06	ci left: 9.999976e-01	ci right 1	k: 1530000	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
POLDIP2   1530000 perm   1146 sec   (1335 perm/sec)   p_kst 6.535948e-07   p_cons 1   p_joint 4.444444e-05

Joint ci ratio: 4.719018e-01	ci left: 3.428890e-05	ci right 5.597772e-05	k: 68	n:1540000
Cons ci ratio: 2.545451e-06	ci left: 9.999976e-01	ci right 1	k: 1540000	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
POLDIP2   1540000 perm   1159 sec   (1329 perm/sec)   p_kst 6.493506e-07   p_cons 1   p_joint 4.415584e-05

Joint ci ratio: 4.619656e-01	ci left: 3.577539e-05	ci right 5.777826e-05	k: 71	n:1550000
Cons ci ratio: 2.529029e-06	ci left: 9.999976e-01	ci right 1	k: 1550000	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
POLDIP2   1550000 perm   1172 sec   (1322 perm/sec)   p_kst 6.451613e-07   p_cons 1   p_joint 4.580645e-05

Joint ci ratio: 4.619656e-01	ci left: 3.554606e-05	ci right 5.740789e-05	k: 71	n:1560000
Cons ci ratio: 2.512817e-06	ci left: 9.999976e-01	ci right 1	k: 1560000	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
POLDIP2   1560000 perm   1186 sec   (1316 perm/sec)   p_kst 6.410256e-07   p_cons 1   p_joint 4.551282e-05

Joint ci ratio: 4.685190e-01	ci left: 3.419514e-05	ci right 5.562000e-05	k: 69	n:1570000
Cons ci ratio: 2.496812e-06	ci left: 9.999977e-01	ci right 1	k: 1570000	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
POLDIP2   1570000 perm   1199 sec   (1309 perm/sec)   p_kst 6.369427e-07   p_cons 1   p_joint 4.394904e-05

Joint ci ratio: 4.899899e-01	ci left: 3.063996e-05	ci right 5.101514e-05	k: 63	n:1580000
Cons ci ratio: 2.481010e-06	ci left: 9.999977e-01	ci right 1	k: 1580000	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
POLDIP2   1580000 perm   1213 sec   (1303 perm/sec)   p_kst 6.329114e-07   p_cons 1   p_joint 3.987342e-05

Joint ci ratio: 4.899900e-01	ci left: 3.044726e-05	ci right 5.069429e-05	k: 63	n:1590000
Cons ci ratio: 2.465406e-06	ci left: 9.999977e-01	ci right 1	k: 1590000	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
POLDIP2   1590000 perm   1226 sec   (1296 perm/sec)   p_kst 6.289308e-07   p_cons 1   p_joint 3.962264e-05

Joint ci ratio: 4.862061e-01	ci left: 3.080501e-05	ci right 5.107882e-05	k: 64	n:1600000
Cons ci ratio: 2.449997e-06	ci left: 9.999977e-01	ci right 1	k: 1600000	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
POLDIP2   1600000 perm   1240 sec   (1290 perm/sec)   p_kst 6.250000e-07   p_cons 1   p_joint 4.000000e-05

Joint ci ratio: 4.862062e-01	ci left: 3.061367e-05	ci right 5.076157e-05	k: 64	n:1610000
Cons ci ratio: 2.434780e-06	ci left: 9.999977e-01	ci right 1	k: 1610000	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
POLDIP2   1610000 perm   1254 sec   (1284 perm/sec)   p_kst 6.211180e-07   p_cons 1   p_joint 3.975155e-05

Joint ci ratio: 5.384444e-01	ci left: 2.397298e-05	ci right 4.209305e-05	k: 52	n:1620000
Cons ci ratio: 2.419750e-06	ci left: 9.999977e-01	ci right 1	k: 1620000	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
POLDIP2   1620000 perm   1268 sec   (1278 perm/sec)   p_kst 6.172840e-07   p_cons 1   p_joint 3.209877e-05

Joint ci ratio: 5.238229e-01	ci left: 2.541944e-05	ci right 4.392006e-05	k: 55	n:1630000
Cons ci ratio: 2.404905e-06	ci left: 9.999977e-01	ci right 1	k: 1630000	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
POLDIP2   1630000 perm   1282 sec   (1271 perm/sec)   p_kst 6.134969e-07   p_cons 1   p_joint 3.374233e-05

Joint ci ratio: 5.192075e-01	ci left: 2.579388e-05	ci right 4.434164e-05	k: 56	n:1640000
Cons ci ratio: 2.390241e-06	ci left: 9.999978e-01	ci right 1	k: 1640000	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
POLDIP2   1640000 perm   1296 sec   (1265 perm/sec)   p_kst 6.097561e-07   p_cons 1   p_joint 3.414634e-05

Joint ci ratio: 5.192076e-01	ci left: 2.563755e-05	ci right 4.407290e-05	k: 56	n:1650000
Cons ci ratio: 2.375755e-06	ci left: 9.999978e-01	ci right 1	k: 1650000	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
POLDIP2   1650000 perm   1310 sec   (1260 perm/sec)   p_kst 6.060606e-07   p_cons 1   p_joint 3.393939e-05

Joint ci ratio: 5.192076e-01	ci left: 2.548311e-05	ci right 4.380740e-05	k: 56	n:1660000
Cons ci ratio: 2.361443e-06	ci left: 9.999978e-01	ci right 1	k: 1660000	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
POLDIP2   1660000 perm   1324 sec   (1253 perm/sec)   p_kst 6.024096e-07   p_cons 1   p_joint 3.373494e-05

Joint ci ratio: 5.238231e-01	ci left: 2.481059e-05	ci right 4.286809e-05	k: 55	n:1670000
Cons ci ratio: 2.347303e-06	ci left: 9.999978e-01	ci right 1	k: 1670000	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
POLDIP2   1670000 perm   1339 sec   (1248 perm/sec)   p_kst 5.988024e-07   p_cons 1   p_joint 3.293413e-05

Joint ci ratio: 5.238231e-01	ci left: 2.466291e-05	ci right 4.261292e-05	k: 55	n:1680000
Cons ci ratio: 2.333331e-06	ci left: 9.999978e-01	ci right 1	k: 1680000	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
POLDIP2   1680000 perm   1353 sec   (1241 perm/sec)   p_kst 5.952381e-07   p_cons 1   p_joint 3.273810e-05

Joint ci ratio: 5.238232e-01	ci left: 2.451697e-05	ci right 4.236077e-05	k: 55	n:1690000
Cons ci ratio: 2.319524e-06	ci left: 9.999978e-01	ci right 1	k: 1690000	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
POLDIP2   1690000 perm   1368 sec   (1235 perm/sec)   p_kst 5.917160e-07   p_cons 1   p_joint 3.254438e-05

Joint ci ratio: 5.238233e-01	ci left: 2.437275e-05	ci right 4.211159e-05	k: 55	n:1700000
Cons ci ratio: 2.305880e-06	ci left: 9.999978e-01	ci right 1	k: 1700000	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
POLDIP2   1700000 perm   1383 sec   (1229 perm/sec)   p_kst 5.882353e-07   p_cons 1   p_joint 3.235294e-05

Joint ci ratio: 5.192079e-01	ci left: 2.473799e-05	ci right 4.252649e-05	k: 56	n:1710000
Cons ci ratio: 2.292395e-06	ci left: 9.999978e-01	ci right 1	k: 1710000	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
POLDIP2   1710000 perm   1398 sec   (1223 perm/sec)   p_kst 5.847953e-07   p_cons 1   p_joint 3.274854e-05

Joint ci ratio: 5.192079e-01	ci left: 2.459416e-05	ci right 4.227925e-05	k: 56	n:1720000
Cons ci ratio: 2.279067e-06	ci left: 9.999979e-01	ci right 1	k: 1720000	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
POLDIP2   1720000 perm   1413 sec   (1217 perm/sec)   p_kst 5.813953e-07   p_cons 1   p_joint 3.255814e-05

Joint ci ratio: 5.384450e-01	ci left: 2.244868e-05	ci right 3.941663e-05	k: 52	n:1730000
Cons ci ratio: 2.265893e-06	ci left: 9.999979e-01	ci right 1	k: 1730000	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
POLDIP2   1730000 perm   1428 sec   (1212 perm/sec)   p_kst 5.780347e-07   p_cons 1   p_joint 3.005780e-05

Joint ci ratio: 7.040463e-01	ci left: 1.163272e-05	ci right 2.461305e-05	k: 30	n:1740000
Cons ci ratio: 2.252871e-06	ci left: 9.999979e-01	ci right 1	k: 1740000	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
POLDIP2   1740000 perm   1442 sec   (1206 perm/sec)   p_kst 5.747126e-07   p_cons 1   p_joint 1.724138e-05

Joint ci ratio: 7.040463e-01	ci left: 1.156624e-05	ci right 2.447240e-05	k: 30	n:1750000
Cons ci ratio: 2.239997e-06	ci left: 9.999979e-01	ci right 1	k: 1750000	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
POLDIP2   1750000 perm   1457 sec   (1201 perm/sec)   p_kst 5.714286e-07   p_cons 1   p_joint 1.714286e-05

Joint ci ratio: 7.040464e-01	ci left: 1.150053e-05	ci right 2.433336e-05	k: 30	n:1760000
Cons ci ratio: 2.227270e-06	ci left: 9.999979e-01	ci right 1	k: 1760000	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
POLDIP2   1760000 perm   1472 sec   (1195 perm/sec)   p_kst 5.681818e-07   p_cons 1   p_joint 1.704545e-05

Joint ci ratio: 7.040464e-01	ci left: 1.143555e-05	ci right 2.419588e-05	k: 30	n:1770000
Cons ci ratio: 2.214687e-06	ci left: 9.999979e-01	ci right 1	k: 1770000	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
POLDIP2   1770000 perm   1488 sec   (1190 perm/sec)   p_kst 5.649718e-07   p_cons 1   p_joint 1.694915e-05

Joint ci ratio: 7.040465e-01	ci left: 1.137131e-05	ci right 2.405995e-05	k: 30	n:1780000
Cons ci ratio: 2.202245e-06	ci left: 9.999979e-01	ci right 1	k: 1780000	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
POLDIP2   1780000 perm   1503 sec   (1184 perm/sec)   p_kst 5.617978e-07   p_cons 1   p_joint 1.685393e-05

Joint ci ratio: 7.040465e-01	ci left: 1.130778e-05	ci right 2.392554e-05	k: 30	n:1790000
Cons ci ratio: 2.189942e-06	ci left: 9.999979e-01	ci right 1	k: 1790000	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
POLDIP2   1790000 perm   1519 sec   (1179 perm/sec)   p_kst 5.586592e-07   p_cons 1   p_joint 1.675978e-05

Joint ci ratio: 6.929583e-01	ci left: 1.170169e-05	ci right 2.444548e-05	k: 31	n:1800000
Cons ci ratio: 2.177775e-06	ci left: 9.999980e-01	ci right 1	k: 1800000	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
POLDIP2   1800000 perm   1534 sec   (1173 perm/sec)   p_kst 5.555556e-07   p_cons 1   p_joint 1.722222e-05

Joint ci ratio: 6.929583e-01	ci left: 1.163704e-05	ci right 2.431042e-05	k: 31	n:1810000
Cons ci ratio: 2.165743e-06	ci left: 9.999980e-01	ci right 1	k: 1810000	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
POLDIP2   1810000 perm   1550 sec   (1168 perm/sec)   p_kst 5.524862e-07   p_cons 1   p_joint 1.712707e-05

Joint ci ratio: 6.929584e-01	ci left: 1.157310e-05	ci right 2.417685e-05	k: 31	n:1820000
Cons ci ratio: 2.153844e-06	ci left: 9.999980e-01	ci right 1	k: 1820000	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
POLDIP2   1820000 perm   1565 sec   (1163 perm/sec)   p_kst 5.494505e-07   p_cons 1   p_joint 1.703297e-05

Joint ci ratio: 6.929584e-01	ci left: 1.150986e-05	ci right 2.404474e-05	k: 31	n:1830000
Cons ci ratio: 2.142074e-06	ci left: 9.999980e-01	ci right 1	k: 1830000	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
POLDIP2   1830000 perm   1581 sec   (1158 perm/sec)   p_kst 5.464481e-07   p_cons 1   p_joint 1.693989e-05

Joint ci ratio: 6.823781e-01	ci left: 1.189567e-05	ci right 2.455124e-05	k: 32	n:1840000
Cons ci ratio: 2.130432e-06	ci left: 9.999980e-01	ci right 1	k: 1840000	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
POLDIP2   1840000 perm   1596 sec   (1153 perm/sec)   p_kst 5.434783e-07   p_cons 1   p_joint 1.739130e-05

Joint ci ratio: 6.823781e-01	ci left: 1.183137e-05	ci right 2.441854e-05	k: 32	n:1850000
Cons ci ratio: 2.118917e-06	ci left: 9.999980e-01	ci right 1	k: 1850000	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
POLDIP2   1850000 perm   1612 sec   (1148 perm/sec)   p_kst 5.405405e-07   p_cons 1   p_joint 1.729730e-05

Joint ci ratio: 6.823782e-01	ci left: 1.176776e-05	ci right 2.428725e-05	k: 32	n:1860000
Cons ci ratio: 2.107525e-06	ci left: 9.999980e-01	ci right 1	k: 1860000	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
POLDIP2   1860000 perm   1627 sec   (1143 perm/sec)   p_kst 5.376344e-07   p_cons 1   p_joint 1.720430e-05

Joint ci ratio: 6.823782e-01	ci left: 1.170483e-05	ci right 2.415738e-05	k: 32	n:1870000
Cons ci ratio: 2.096254e-06	ci left: 9.999980e-01	ci right 1	k: 1870000	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
POLDIP2   1870000 perm   1643 sec   (1138 perm/sec)   p_kst 5.347594e-07   p_cons 1   p_joint 1.711230e-05

Joint ci ratio: 6.823782e-01	ci left: 1.164257e-05	ci right 2.402888e-05	k: 32	n:1880000
Cons ci ratio: 2.085104e-06	ci left: 9.999980e-01	ci right 1	k: 1880000	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
POLDIP2   1880000 perm   1659 sec   (1133 perm/sec)   p_kst 5.319149e-07   p_cons 1   p_joint 1.702128e-05

Joint ci ratio: 6.625946e-01	ci left: 1.245823e-05	ci right 2.513832e-05	k: 34	n:1890000
Cons ci ratio: 2.074072e-06	ci left: 9.999980e-01	ci right 1	k: 1890000	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
POLDIP2   1890000 perm   1674 sec   (1129 perm/sec)   p_kst 5.291005e-07   p_cons 1   p_joint 1.798942e-05

Joint ci ratio: 6.625947e-01	ci left: 1.239266e-05	ci right 2.500601e-05	k: 34	n:1900000
Cons ci ratio: 2.063156e-06	ci left: 9.999981e-01	ci right 1	k: 1900000	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
POLDIP2   1900000 perm   1690 sec   (1124 perm/sec)   p_kst 5.263158e-07   p_cons 1   p_joint 1.789474e-05

Joint ci ratio: 6.625947e-01	ci left: 1.232777e-05	ci right 2.487509e-05	k: 34	n:1910000
Cons ci ratio: 2.052354e-06	ci left: 9.999981e-01	ci right 1	k: 1910000	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
POLDIP2   1910000 perm   1706 sec   (1120 perm/sec)   p_kst 5.235602e-07   p_cons 1   p_joint 1.780105e-05

Joint ci ratio: 6.625947e-01	ci left: 1.226357e-05	ci right 2.474553e-05	k: 34	n:1920000
Cons ci ratio: 2.041665e-06	ci left: 9.999981e-01	ci right 1	k: 1920000	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
POLDIP2   1920000 perm   1722 sec   (1115 perm/sec)   p_kst 5.208333e-07   p_cons 1   p_joint 1.770833e-05

Joint ci ratio: 6.625948e-01	ci left: 1.220002e-05	ci right 2.461732e-05	k: 34	n:1930000
Cons ci ratio: 2.031086e-06	ci left: 9.999981e-01	ci right 1	k: 1930000	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
POLDIP2   1930000 perm   1738 sec   (1110 perm/sec)   p_kst 5.181347e-07   p_cons 1   p_joint 1.761658e-05

Joint ci ratio: 6.625948e-01	ci left: 1.213714e-05	ci right 2.449043e-05	k: 34	n:1940000
Cons ci ratio: 2.020616e-06	ci left: 9.999981e-01	ci right 1	k: 1940000	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
POLDIP2   1940000 perm   1755 sec   (1105 perm/sec)   p_kst 5.154639e-07   p_cons 1   p_joint 1.752577e-05

Joint ci ratio: 6.625948e-01	ci left: 1.207490e-05	ci right 2.436483e-05	k: 34	n:1950000
Cons ci ratio: 2.010254e-06	ci left: 9.999981e-01	ci right 1	k: 1950000	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
POLDIP2   1950000 perm   1771 sec   (1101 perm/sec)   p_kst 5.128205e-07   p_cons 1   p_joint 1.743590e-05

Joint ci ratio: 6.722685e-01	ci left: 1.158966e-05	ci right 2.364495e-05	k: 33	n:1960000
Cons ci ratio: 1.999998e-06	ci left: 9.999981e-01	ci right 1	k: 1960000	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
POLDIP2   1960000 perm   1788 sec   (1096 perm/sec)   p_kst 5.102041e-07   p_cons 1   p_joint 1.683673e-05

Joint ci ratio: 6.625949e-01	ci left: 1.195231e-05	ci right 2.411748e-05	k: 34	n:1970000
Cons ci ratio: 1.989846e-06	ci left: 9.999981e-01	ci right 1	k: 1970000	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
POLDIP2   1970000 perm   1804 sec   (1092 perm/sec)   p_kst 5.076142e-07   p_cons 1   p_joint 1.725888e-05

Joint ci ratio: 6.625949e-01	ci left: 1.189194e-05	ci right 2.399567e-05	k: 34	n:1980000
Cons ci ratio: 1.979796e-06	ci left: 9.999981e-01	ci right 1	k: 1980000	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
POLDIP2   1980000 perm   1821 sec   (1088 perm/sec)   p_kst 5.050505e-07   p_cons 1   p_joint 1.717172e-05

Joint ci ratio: 6.625949e-01	ci left: 1.183218e-05	ci right 2.387509e-05	k: 34	n:1990000
Cons ci ratio: 1.969847e-06	ci left: 9.999981e-01	ci right 1	k: 1990000	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
POLDIP2   1990000 perm   1837 sec   (1083 perm/sec)   p_kst 5.025126e-07   p_cons 1   p_joint 1.708543e-05

Joint ci ratio: 6.625950e-01	ci left: 1.177302e-05	ci right 2.375572e-05	k: 34	n:2000000
Cons ci ratio: 1.959998e-06	ci left: 9.999982e-01	ci right 1	k: 2000000	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
POLDIP2   2000000 perm   1854 sec   (1079 perm/sec)   p_kst 5.000000e-07   p_cons 1   p_joint 1.700000e-05

Joint ci ratio: 6.625950e-01	ci left: 1.171445e-05	ci right 2.363753e-05	k: 34	n:2010000
Cons ci ratio: 1.950247e-06	ci left: 9.999982e-01	ci right 1	k: 2010000	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
POLDIP2   2010000 perm   1870 sec   (1075 perm/sec)   p_kst 4.975124e-07   p_cons 1   p_joint 1.691542e-05

Joint ci ratio: 6.533273e-01	ci left: 1.206873e-05	ci right 2.409721e-05	k: 35	n:2020000
Cons ci ratio: 1.940592e-06	ci left: 9.999982e-01	ci right 1	k: 2020000	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
POLDIP2   2020000 perm   1888 sec   (1070 perm/sec)   p_kst 4.950495e-07   p_cons 1   p_joint 1.732673e-05

Joint ci ratio: 6.444380e-01	ci left: 1.242070e-05	ci right 2.455123e-05	k: 36	n:2030000
Cons ci ratio: 1.931033e-06	ci left: 9.999982e-01	ci right 1	k: 2030000	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
POLDIP2   2030000 perm   1905 sec   (1066 perm/sec)   p_kst 4.926108e-07   p_cons 1   p_joint 1.773399e-05

Joint ci ratio: 6.444380e-01	ci left: 1.235981e-05	ci right 2.443089e-05	k: 36	n:2040000
Cons ci ratio: 1.921567e-06	ci left: 9.999982e-01	ci right 1	k: 2040000	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
POLDIP2   2040000 perm   1922 sec   (1061 perm/sec)   p_kst 4.901961e-07   p_cons 1   p_joint 1.764706e-05

Joint ci ratio: 6.359019e-01	ci left: 1.270804e-05	ci right 2.487778e-05	k: 37	n:2050000
Cons ci ratio: 1.912193e-06	ci left: 9.999982e-01	ci right 1	k: 2050000	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
POLDIP2   2050000 perm   1939 sec   (1057 perm/sec)   p_kst 4.878049e-07   p_cons 1   p_joint 1.804878e-05

Joint ci ratio: 6.276963e-01	ci left: 1.305395e-05	ci right 2.531932e-05	k: 38	n:2060000
Cons ci ratio: 1.902911e-06	ci left: 9.999982e-01	ci right 1	k: 2060000	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
POLDIP2   2060000 perm   1956 sec   (1053 perm/sec)   p_kst 4.854369e-07   p_cons 1   p_joint 1.844660e-05

Joint ci ratio: 6.276963e-01	ci left: 1.299088e-05	ci right 2.519700e-05	k: 38	n:2070000
Cons ci ratio: 1.893718e-06	ci left: 9.999982e-01	ci right 1	k: 2070000	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
POLDIP2   2070000 perm   1973 sec   (1049 perm/sec)   p_kst 4.830918e-07   p_cons 1   p_joint 1.835749e-05

Joint ci ratio: 6.276963e-01	ci left: 1.292843e-05	ci right 2.507586e-05	k: 38	n:2080000
Cons ci ratio: 1.884614e-06	ci left: 9.999982e-01	ci right 1	k: 2080000	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
POLDIP2   2080000 perm   1991 sec   (1045 perm/sec)   p_kst 4.807692e-07   p_cons 1   p_joint 1.826923e-05

Joint ci ratio: 6.198003e-01	ci left: 1.326932e-05	ci right 2.550914e-05	k: 39	n:2090000
Cons ci ratio: 1.875596e-06	ci left: 9.999982e-01	ci right 1	k: 2090000	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
POLDIP2   2090000 perm   2008 sec   (1041 perm/sec)   p_kst 4.784689e-07   p_cons 1   p_joint 1.866029e-05

Joint ci ratio: 6.198004e-01	ci left: 1.320613e-05	ci right 2.538767e-05	k: 39	n:2100000
Cons ci ratio: 1.866665e-06	ci left: 9.999982e-01	ci right 1	k: 2100000	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
POLDIP2   2100000 perm   2026 sec   (1037 perm/sec)   p_kst 4.761905e-07   p_cons 1   p_joint 1.857143e-05

Joint ci ratio: 6.198004e-01	ci left: 1.314355e-05	ci right 2.526735e-05	k: 39	n:2110000
Cons ci ratio: 1.857818e-06	ci left: 9.999983e-01	ci right 1	k: 2110000	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
POLDIP2   2110000 perm   2043 sec   (1033 perm/sec)   p_kst 4.739336e-07   p_cons 1   p_joint 1.848341e-05

Joint ci ratio: 6.198004e-01	ci left: 1.308155e-05	ci right 2.514816e-05	k: 39	n:2120000
Cons ci ratio: 1.849055e-06	ci left: 9.999983e-01	ci right 1	k: 2120000	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
POLDIP2   2120000 perm   2061 sec   (1029 perm/sec)   p_kst 4.716981e-07   p_cons 1   p_joint 1.839623e-05

Joint ci ratio: 6.198005e-01	ci left: 1.302013e-05	ci right 2.503010e-05	k: 39	n:2130000
Cons ci ratio: 1.840374e-06	ci left: 9.999983e-01	ci right 1	k: 2130000	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
POLDIP2   2130000 perm   2078 sec   (1025 perm/sec)   p_kst 4.694836e-07   p_cons 1   p_joint 1.830986e-05

Joint ci ratio: 6.198005e-01	ci left: 1.295929e-05	ci right 2.491313e-05	k: 39	n:2140000
Cons ci ratio: 1.831774e-06	ci left: 9.999983e-01	ci right 1	k: 2140000	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
POLDIP2   2140000 perm   2096 sec   (1021 perm/sec)   p_kst 4.672897e-07   p_cons 1   p_joint 1.822430e-05

Joint ci ratio: 6.121952e-01	ci left: 1.329147e-05	ci right 2.533417e-05	k: 40	n:2150000
Cons ci ratio: 1.823254e-06	ci left: 9.999983e-01	ci right 1	k: 2150000	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
POLDIP2   2150000 perm   2114 sec   (1017 perm/sec)   p_kst 4.651163e-07   p_cons 1   p_joint 1.860465e-05

Joint ci ratio: 6.121952e-01	ci left: 1.322993e-05	ci right 2.521688e-05	k: 40	n:2160000
Cons ci ratio: 1.814813e-06	ci left: 9.999983e-01	ci right 1	k: 2160000	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
POLDIP2   2160000 perm   2132 sec   (1013 perm/sec)   p_kst 4.629630e-07   p_cons 1   p_joint 1.851852e-05

Joint ci ratio: 6.121952e-01	ci left: 1.316897e-05	ci right 2.510068e-05	k: 40	n:2170000
Cons ci ratio: 1.806450e-06	ci left: 9.999983e-01	ci right 1	k: 2170000	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
POLDIP2   2170000 perm   2150 sec   (1009 perm/sec)   p_kst 4.608295e-07   p_cons 1   p_joint 1.843318e-05

Joint ci ratio: 6.121952e-01	ci left: 1.310856e-05	ci right 2.498553e-05	k: 40	n:2180000
Cons ci ratio: 1.798163e-06	ci left: 9.999983e-01	ci right 1	k: 2180000	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
POLDIP2   2180000 perm   2168 sec   (1005 perm/sec)   p_kst 4.587156e-07   p_cons 1   p_joint 1.834862e-05

Joint ci ratio: 6.121953e-01	ci left: 1.304870e-05	ci right 2.487145e-05	k: 40	n:2190000
Cons ci ratio: 1.789953e-06	ci left: 9.999983e-01	ci right 1	k: 2190000	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
POLDIP2   2190000 perm   2186 sec   (1002 perm/sec)   p_kst 4.566210e-07   p_cons 1   p_joint 1.826484e-05

Joint ci ratio: 6.121953e-01	ci left: 1.298939e-05	ci right 2.475839e-05	k: 40	n:2200000
Cons ci ratio: 1.781817e-06	ci left: 9.999983e-01	ci right 1	k: 2200000	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
POLDIP2   2200000 perm   2204 sec   (998 perm/sec)   p_kst 4.545455e-07   p_cons 1   p_joint 1.818182e-05

Joint ci ratio: 6.121953e-01	ci left: 1.293061e-05	ci right 2.464637e-05	k: 40	n:2210000
Cons ci ratio: 1.773754e-06	ci left: 9.999983e-01	ci right 1	k: 2210000	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
POLDIP2   2210000 perm   2223 sec   (994 perm/sec)   p_kst 4.524887e-07   p_cons 1   p_joint 1.809955e-05

Joint ci ratio: 6.048633e-01	ci left: 1.325332e-05	ci right 2.505448e-05	k: 41	n:2220000
Cons ci ratio: 1.765764e-06	ci left: 9.999983e-01	ci right 1	k: 2220000	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
POLDIP2   2220000 perm   2241 sec   (991 perm/sec)   p_kst 4.504505e-07   p_cons 1   p_joint 1.846847e-05

Joint ci ratio: 6.048633e-01	ci left: 1.319389e-05	ci right 2.494213e-05	k: 41	n:2230000
Cons ci ratio: 1.757846e-06	ci left: 9.999983e-01	ci right 1	k: 2230000	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
POLDIP2   2230000 perm   2260 sec   (987 perm/sec)   p_kst 4.484305e-07   p_cons 1   p_joint 1.838565e-05

Joint ci ratio: 6.048633e-01	ci left: 1.313499e-05	ci right 2.483078e-05	k: 41	n:2240000
Cons ci ratio: 1.749998e-06	ci left: 9.999984e-01	ci right 1	k: 2240000	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
POLDIP2   2240000 perm   2278 sec   (983 perm/sec)   p_kst 4.464286e-07   p_cons 1   p_joint 1.830357e-05

Joint ci ratio: 5.977886e-01	ci left: 1.345332e-05	ci right 2.523183e-05	k: 42	n:2250000
Cons ci ratio: 1.742221e-06	ci left: 9.999984e-01	ci right 1	k: 2250000	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
POLDIP2   2250000 perm   2296 sec   (980 perm/sec)   p_kst 4.444444e-07   p_cons 1   p_joint 1.866667e-05

Joint ci ratio: 5.977886e-01	ci left: 1.339380e-05	ci right 2.512018e-05	k: 42	n:2260000
Cons ci ratio: 1.734512e-06	ci left: 9.999984e-01	ci right 1	k: 2260000	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
POLDIP2   2260000 perm   2315 sec   (976 perm/sec)   p_kst 4.424779e-07   p_cons 1   p_joint 1.858407e-05

Joint ci ratio: 5.977886e-01	ci left: 1.333479e-05	ci right 2.500952e-05	k: 42	n:2270000
Cons ci ratio: 1.726871e-06	ci left: 9.999984e-01	ci right 1	k: 2270000	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
POLDIP2   2270000 perm   2333 sec   (973 perm/sec)   p_kst 4.405286e-07   p_cons 1   p_joint 1.850220e-05

Joint ci ratio: 5.977886e-01	ci left: 1.327631e-05	ci right 2.489983e-05	k: 42	n:2280000
Cons ci ratio: 1.719297e-06	ci left: 9.999984e-01	ci right 1	k: 2280000	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
POLDIP2   2280000 perm   2352 sec   (969 perm/sec)   p_kst 4.385965e-07   p_cons 1   p_joint 1.842105e-05

Joint ci ratio: 5.977887e-01	ci left: 1.321833e-05	ci right 2.479110e-05	k: 42	n:2290000
Cons ci ratio: 1.711789e-06	ci left: 9.999984e-01	ci right 1	k: 2290000	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
POLDIP2   2290000 perm   2371 sec   (966 perm/sec)   p_kst 4.366812e-07   p_cons 1   p_joint 1.834061e-05

Joint ci ratio: 5.977887e-01	ci left: 1.316086e-05	ci right 2.468331e-05	k: 42	n:2300000
Cons ci ratio: 1.704346e-06	ci left: 9.999984e-01	ci right 1	k: 2300000	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
POLDIP2   2300000 perm   2390 sec   (962 perm/sec)   p_kst 4.347826e-07   p_cons 1   p_joint 1.826087e-05

Joint ci ratio: 5.977887e-01	ci left: 1.310389e-05	ci right 2.457646e-05	k: 42	n:2310000
Cons ci ratio: 1.696968e-06	ci left: 9.999984e-01	ci right 1	k: 2310000	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
POLDIP2   2310000 perm   2409 sec   (959 perm/sec)   p_kst 4.329004e-07   p_cons 1   p_joint 1.818182e-05

Joint ci ratio: 5.977887e-01	ci left: 1.304740e-05	ci right 2.447053e-05	k: 42	n:2320000
Cons ci ratio: 1.689654e-06	ci left: 9.999984e-01	ci right 1	k: 2320000	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
POLDIP2   2320000 perm   2428 sec   (955 perm/sec)   p_kst 4.310345e-07   p_cons 1   p_joint 1.810345e-05

Joint ci ratio: 5.977888e-01	ci left: 1.299141e-05	ci right 2.436550e-05	k: 42	n:2330000
Cons ci ratio: 1.682402e-06	ci left: 9.999984e-01	ci right 1	k: 2330000	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
POLDIP2   2330000 perm   2447 sec   (952 perm/sec)   p_kst 4.291845e-07   p_cons 1   p_joint 1.802575e-05

Joint ci ratio: 5.909566e-01	ci left: 1.329888e-05	ci right 2.475236e-05	k: 43	n:2340000
Cons ci ratio: 1.675212e-06	ci left: 9.999984e-01	ci right 1	k: 2340000	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
POLDIP2   2340000 perm   2466 sec   (949 perm/sec)   p_kst 4.273504e-07   p_cons 1   p_joint 1.837607e-05

Joint ci ratio: 5.909566e-01	ci left: 1.324229e-05	ci right 2.464704e-05	k: 43	n:2350000
Cons ci ratio: 1.668084e-06	ci left: 9.999984e-01	ci right 1	k: 2350000	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
POLDIP2   2350000 perm   2485 sec   (946 perm/sec)   p_kst 4.255319e-07   p_cons 1   p_joint 1.829787e-05

Joint ci ratio: 5.843534e-01	ci left: 1.354684e-05	ci right 2.502871e-05	k: 44	n:2360000
Cons ci ratio: 1.661016e-06	ci left: 9.999984e-01	ci right 1	k: 2360000	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
POLDIP2   2360000 perm   2505 sec   (942 perm/sec)   p_kst 4.237288e-07   p_cons 1   p_joint 1.864407e-05

Joint ci ratio: 5.843534e-01	ci left: 1.348968e-05	ci right 2.492310e-05	k: 44	n:2370000
Cons ci ratio: 1.654007e-06	ci left: 9.999984e-01	ci right 1	k: 2370000	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
POLDIP2   2370000 perm   2525 sec   (939 perm/sec)   p_kst 4.219409e-07   p_cons 1   p_joint 1.856540e-05

Joint ci ratio: 6.198011e-01	ci left: 1.165247e-05	ci right 2.240089e-05	k: 39	n:2380000
Cons ci ratio: 1.647057e-06	ci left: 9.999985e-01	ci right 1	k: 2380000	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
POLDIP2   2380000 perm   2544 sec   (936 perm/sec)   p_kst 4.201681e-07   p_cons 1   p_joint 1.638655e-05

Joint ci ratio: 6.198011e-01	ci left: 1.160371e-05	ci right 2.230716e-05	k: 39	n:2390000
Cons ci ratio: 1.640166e-06	ci left: 9.999985e-01	ci right 1	k: 2390000	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
POLDIP2   2390000 perm   2563 sec   (932 perm/sec)   p_kst 4.184100e-07   p_cons 1   p_joint 1.631799e-05

Joint ci ratio: 6.121958e-01	ci left: 1.190694e-05	ci right 2.269520e-05	k: 40	n:2400000
Cons ci ratio: 1.633332e-06	ci left: 9.999985e-01	ci right 1	k: 2400000	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
POLDIP2   2400000 perm   2583 sec   (929 perm/sec)   p_kst 4.166667e-07   p_cons 1   p_joint 1.666667e-05

Joint ci ratio: 6.121958e-01	ci left: 1.185753e-05	ci right 2.260103e-05	k: 40	n:2410000
Cons ci ratio: 1.626555e-06	ci left: 9.999985e-01	ci right 1	k: 2410000	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
POLDIP2   2410000 perm   2603 sec   (926 perm/sec)   p_kst 4.149378e-07   p_cons 1   p_joint 1.659751e-05

Joint ci ratio: 6.121958e-01	ci left: 1.180853e-05	ci right 2.250764e-05	k: 40	n:2420000
Cons ci ratio: 1.619833e-06	ci left: 9.999985e-01	ci right 1	k: 2420000	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
POLDIP2   2420000 perm   2622 sec   (923 perm/sec)   p_kst 4.132231e-07   p_cons 1   p_joint 1.652893e-05

Joint ci ratio: 6.048638e-01	ci left: 1.210797e-05	ci right 2.288928e-05	k: 41	n:2430000
Cons ci ratio: 1.613167e-06	ci left: 9.999985e-01	ci right 1	k: 2430000	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
POLDIP2   2430000 perm   2642 sec   (920 perm/sec)   p_kst 4.115226e-07   p_cons 1   p_joint 1.687243e-05

Joint ci ratio: 5.977890e-01	ci left: 1.240573e-05	ci right 2.326706e-05	k: 42	n:2440000
Cons ci ratio: 1.606556e-06	ci left: 9.999985e-01	ci right 1	k: 2440000	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
POLDIP2   2440000 perm   2662 sec   (917 perm/sec)   p_kst 4.098361e-07   p_cons 1   p_joint 1.721311e-05

Joint ci ratio: 5.977890e-01	ci left: 1.235509e-05	ci right 2.317209e-05	k: 42	n:2450000
Cons ci ratio: 1.599999e-06	ci left: 9.999985e-01	ci right 1	k: 2450000	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
POLDIP2   2450000 perm   2681 sec   (914 perm/sec)   p_kst 4.081633e-07   p_cons 1   p_joint 1.714286e-05

Joint ci ratio: 6.048638e-01	ci left: 1.196031e-05	ci right 2.261015e-05	k: 41	n:2460000
Cons ci ratio: 1.593495e-06	ci left: 9.999985e-01	ci right 1	k: 2460000	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
POLDIP2   2460000 perm   2701 sec   (911 perm/sec)   p_kst 4.065041e-07   p_cons 1   p_joint 1.666667e-05

Joint ci ratio: 6.048639e-01	ci left: 1.191189e-05	ci right 2.251861e-05	k: 41	n:2470000
Cons ci ratio: 1.587043e-06	ci left: 9.999985e-01	ci right 1	k: 2470000	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
POLDIP2   2470000 perm   2722 sec   (907 perm/sec)   p_kst 4.048583e-07   p_cons 1   p_joint 1.659919e-05

Joint ci ratio: 6.048639e-01	ci left: 1.186386e-05	ci right 2.242781e-05	k: 41	n:2480000
Cons ci ratio: 1.580644e-06	ci left: 9.999985e-01	ci right 1	k: 2480000	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
POLDIP2   2480000 perm   2742 sec   (904 perm/sec)   p_kst 4.032258e-07   p_cons 1   p_joint 1.653226e-05

Joint ci ratio: 5.977891e-01	ci left: 1.215661e-05	ci right 2.279985e-05	k: 42	n:2490000
Cons ci ratio: 1.574296e-06	ci left: 9.999985e-01	ci right 1	k: 2490000	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
POLDIP2   2490000 perm   2762 sec   (902 perm/sec)   p_kst 4.016064e-07   p_cons 1   p_joint 1.686747e-05

Joint ci ratio: 5.977891e-01	ci left: 1.210799e-05	ci right 2.270865e-05	k: 42	n:2500000
Cons ci ratio: 1.567999e-06	ci left: 9.999985e-01	ci right 1	k: 2500000	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
POLDIP2   2500000 perm   2782 sec   (899 perm/sec)   p_kst 4.000000e-07   p_cons 1   p_joint 1.680000e-05

Joint ci ratio: 5.977892e-01	ci left: 1.205975e-05	ci right 2.261818e-05	k: 42	n:2510000
Cons ci ratio: 1.561752e-06	ci left: 9.999985e-01	ci right 1	k: 2510000	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
POLDIP2   2510000 perm   2802 sec   (896 perm/sec)   p_kst 3.984064e-07   p_cons 1   p_joint 1.673307e-05

Joint ci ratio: 5.909570e-01	ci left: 1.234896e-05	ci right 2.298434e-05	k: 43	n:2520000
Cons ci ratio: 1.555554e-06	ci left: 9.999985e-01	ci right 1	k: 2520000	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
POLDIP2   2520000 perm   2823 sec   (893 perm/sec)   p_kst 3.968254e-07   p_cons 1   p_joint 1.706349e-05

Joint ci ratio: 5.843538e-01	ci left: 1.263658e-05	ci right 2.334694e-05	k: 44	n:2530000
Cons ci ratio: 1.549406e-06	ci left: 9.999985e-01	ci right 1	k: 2530000	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
POLDIP2   2530000 perm   2844 sec   (890 perm/sec)   p_kst 3.952569e-07   p_cons 1   p_joint 1.739130e-05

Joint ci ratio: 5.843538e-01	ci left: 1.258683e-05	ci right 2.325503e-05	k: 44	n:2540000
Cons ci ratio: 1.543306e-06	ci left: 9.999985e-01	ci right 1	k: 2540000	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
POLDIP2   2540000 perm   2864 sec   (887 perm/sec)   p_kst 3.937008e-07   p_cons 1   p_joint 1.732283e-05

Joint ci ratio: 5.843538e-01	ci left: 1.253747e-05	ci right 2.316383e-05	k: 44	n:2550000
Cons ci ratio: 1.537254e-06	ci left: 9.999986e-01	ci right 1	k: 2550000	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
POLDIP2   2550000 perm   2885 sec   (884 perm/sec)   p_kst 3.921569e-07   p_cons 1   p_joint 1.725490e-05

Joint ci ratio: 5.843538e-01	ci left: 1.248849e-05	ci right 2.307335e-05	k: 44	n:2560000
Cons ci ratio: 1.531249e-06	ci left: 9.999986e-01	ci right 1	k: 2560000	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
POLDIP2   2560000 perm   2907 sec   (881 perm/sec)   p_kst 3.906250e-07   p_cons 1   p_joint 1.718750e-05

Joint ci ratio: 5.843539e-01	ci left: 1.243990e-05	ci right 2.298357e-05	k: 44	n:2570000
Cons ci ratio: 1.525291e-06	ci left: 9.999986e-01	ci right 1	k: 2570000	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
POLDIP2   2570000 perm   2928 sec   (878 perm/sec)   p_kst 3.891051e-07   p_cons 1   p_joint 1.712062e-05

Joint ci ratio: 5.843539e-01	ci left: 1.239168e-05	ci right 2.289449e-05	k: 44	n:2580000
Cons ci ratio: 1.519379e-06	ci left: 9.999986e-01	ci right 1	k: 2580000	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
POLDIP2   2580000 perm   2949 sec   (875 perm/sec)   p_kst 3.875969e-07   p_cons 1   p_joint 1.705426e-05

Joint ci ratio: 5.843539e-01	ci left: 1.234384e-05	ci right 2.280609e-05	k: 44	n:2590000
Cons ci ratio: 1.513512e-06	ci left: 9.999986e-01	ci right 1	k: 2590000	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
POLDIP2   2590000 perm   2970 sec   (872 perm/sec)   p_kst 3.861004e-07   p_cons 1   p_joint 1.698842e-05

Joint ci ratio: 5.843539e-01	ci left: 1.229636e-05	ci right 2.271838e-05	k: 44	n:2600000
Cons ci ratio: 1.507691e-06	ci left: 9.999986e-01	ci right 1	k: 2600000	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
POLDIP2   2600000 perm   2991 sec   (869 perm/sec)   p_kst 3.846154e-07   p_cons 1   p_joint 1.692308e-05

Joint ci ratio: 5.843539e-01	ci left: 1.224925e-05	ci right 2.263133e-05	k: 44	n:2610000
Cons ci ratio: 1.501915e-06	ci left: 9.999986e-01	ci right 1	k: 2610000	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
POLDIP2   2610000 perm   3012 sec   (867 perm/sec)   p_kst 3.831418e-07   p_cons 1   p_joint 1.685824e-05

Joint ci ratio: 5.843540e-01	ci left: 1.220249e-05	ci right 2.254495e-05	k: 44	n:2620000
Cons ci ratio: 1.496182e-06	ci left: 9.999986e-01	ci right 1	k: 2620000	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
POLDIP2   2620000 perm   3033 sec   (864 perm/sec)   p_kst 3.816794e-07   p_cons 1   p_joint 1.679389e-05

Joint ci ratio: 5.843540e-01	ci left: 1.215610e-05	ci right 2.245923e-05	k: 44	n:2630000
Cons ci ratio: 1.490493e-06	ci left: 9.999986e-01	ci right 1	k: 2630000	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
POLDIP2   2630000 perm   3055 sec   (861 perm/sec)   p_kst 3.802281e-07   p_cons 1   p_joint 1.673004e-05

Joint ci ratio: 5.779673e-01	ci left: 1.243310e-05	ci right 2.280809e-05	k: 45	n:2640000
Cons ci ratio: 1.484847e-06	ci left: 9.999986e-01	ci right 1	k: 2640000	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
POLDIP2   2640000 perm   3076 sec   (858 perm/sec)   p_kst 3.787879e-07   p_cons 1   p_joint 1.704545e-05

Joint ci ratio: 5.779673e-01	ci left: 1.238618e-05	ci right 2.272203e-05	k: 45	n:2650000
Cons ci ratio: 1.479244e-06	ci left: 9.999986e-01	ci right 1	k: 2650000	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
POLDIP2   2650000 perm   3097 sec   (856 perm/sec)   p_kst 3.773585e-07   p_cons 1   p_joint 1.698113e-05

Joint ci ratio: 5.717856e-01	ci left: 1.266085e-05	ci right 2.306668e-05	k: 46	n:2660000
Cons ci ratio: 1.473683e-06	ci left: 9.999986e-01	ci right 1	k: 2660000	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
POLDIP2   2660000 perm   3119 sec   (853 perm/sec)   p_kst 3.759398e-07   p_cons 1   p_joint 1.729323e-05

Joint ci ratio: 5.717856e-01	ci left: 1.261343e-05	ci right 2.298029e-05	k: 46	n:2670000
Cons ci ratio: 1.468164e-06	ci left: 9.999986e-01	ci right 1	k: 2670000	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
POLDIP2   2670000 perm   3141 sec   (850 perm/sec)   p_kst 3.745318e-07   p_cons 1   p_joint 1.722846e-05

Joint ci ratio: 5.657981e-01	ci left: 1.288579e-05	ci right 2.332084e-05	k: 47	n:2680000
Cons ci ratio: 1.462685e-06	ci left: 9.999986e-01	ci right 1	k: 2680000	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
POLDIP2   2680000 perm   3163 sec   (847 perm/sec)   p_kst 3.731343e-07   p_cons 1   p_joint 1.753731e-05

Joint ci ratio: 5.657981e-01	ci left: 1.283788e-05	ci right 2.323415e-05	k: 47	n:2690000
Cons ci ratio: 1.457248e-06	ci left: 9.999986e-01	ci right 1	k: 2690000	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
POLDIP2   2690000 perm   3185 sec   (845 perm/sec)   p_kst 3.717472e-07   p_cons 1   p_joint 1.747212e-05

Joint ci ratio: 5.599948e-01	ci left: 1.310796e-05	ci right 2.357069e-05	k: 48	n:2700000
Cons ci ratio: 1.451851e-06	ci left: 9.999986e-01	ci right 1	k: 2700000	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
POLDIP2   2700000 perm   3207 sec   (842 perm/sec)   p_kst 3.703704e-07   p_cons 1   p_joint 1.777778e-05

Joint ci ratio: 5.599948e-01	ci left: 1.305959e-05	ci right 2.348371e-05	k: 48	n:2710000
Cons ci ratio: 1.446493e-06	ci left: 9.999986e-01	ci right 1	k: 2710000	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
POLDIP2   2710000 perm   3229 sec   (839 perm/sec)   p_kst 3.690037e-07   p_cons 1   p_joint 1.771218e-05

Joint ci ratio: 5.599949e-01	ci left: 1.301158e-05	ci right 2.339737e-05	k: 48	n:2720000
Cons ci ratio: 1.441175e-06	ci left: 9.999986e-01	ci right 1	k: 2720000	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
POLDIP2   2720000 perm   3251 sec   (837 perm/sec)   p_kst 3.676471e-07   p_cons 1   p_joint 1.764706e-05

Joint ci ratio: 5.543665e-01	ci left: 1.327859e-05	ci right 2.372909e-05	k: 49	n:2730000
Cons ci ratio: 1.435896e-06	ci left: 9.999986e-01	ci right 1	k: 2730000	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
POLDIP2   2730000 perm   3273 sec   (834 perm/sec)   p_kst 3.663004e-07   p_cons 1   p_joint 1.794872e-05

Joint ci ratio: 5.543666e-01	ci left: 1.323013e-05	ci right 2.364249e-05	k: 49	n:2740000
Cons ci ratio: 1.430656e-06	ci left: 9.999987e-01	ci right 1	k: 2740000	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
POLDIP2   2740000 perm   3296 sec   (831 perm/sec)   p_kst 3.649635e-07   p_cons 1   p_joint 1.788321e-05

Joint ci ratio: 5.543666e-01	ci left: 1.318202e-05	ci right 2.355651e-05	k: 49	n:2750000
Cons ci ratio: 1.425454e-06	ci left: 9.999987e-01	ci right 1	k: 2750000	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
POLDIP2   2750000 perm   3319 sec   (829 perm/sec)   p_kst 3.636364e-07   p_cons 1   p_joint 1.781818e-05

Joint ci ratio: 5.543666e-01	ci left: 1.313426e-05	ci right 2.347116e-05	k: 49	n:2760000
Cons ci ratio: 1.420289e-06	ci left: 9.999987e-01	ci right 1	k: 2760000	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
POLDIP2   2760000 perm   3341 sec   (826 perm/sec)   p_kst 3.623188e-07   p_cons 1   p_joint 1.775362e-05

Joint ci ratio: 5.543666e-01	ci left: 1.308684e-05	ci right 2.338643e-05	k: 49	n:2770000
Cons ci ratio: 1.415161e-06	ci left: 9.999987e-01	ci right 1	k: 2770000	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
POLDIP2   2770000 perm   3363 sec   (824 perm/sec)   p_kst 3.610108e-07   p_cons 1   p_joint 1.768953e-05

Joint ci ratio: 5.489047e-01	ci left: 1.334930e-05	ci right 2.371172e-05	k: 50	n:2780000
Cons ci ratio: 1.410071e-06	ci left: 9.999987e-01	ci right 1	k: 2780000	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
POLDIP2   2780000 perm   3386 sec   (821 perm/sec)   p_kst 3.597122e-07   p_cons 1   p_joint 1.798561e-05

Joint ci ratio: 5.489047e-01	ci left: 1.330145e-05	ci right 2.362673e-05	k: 50	n:2790000
Cons ci ratio: 1.405017e-06	ci left: 9.999987e-01	ci right 1	k: 2790000	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
POLDIP2   2790000 perm   3409 sec   (819 perm/sec)   p_kst 3.584229e-07   p_cons 1   p_joint 1.792115e-05

Joint ci ratio: 5.489047e-01	ci left: 1.325394e-05	ci right 2.354235e-05	k: 50	n:2800000
Cons ci ratio: 1.399999e-06	ci left: 9.999987e-01	ci right 1	k: 2800000	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
POLDIP2   2800000 perm   3431 sec   (816 perm/sec)   p_kst 3.571429e-07   p_cons 1   p_joint 1.785714e-05

Joint ci ratio: 5.489047e-01	ci left: 1.320678e-05	ci right 2.345857e-05	k: 50	n:2810000
Cons ci ratio: 1.395017e-06	ci left: 9.999987e-01	ci right 1	k: 2810000	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
POLDIP2   2810000 perm   3455 sec   (813 perm/sec)   p_kst 3.558719e-07   p_cons 1   p_joint 1.779359e-05

Joint ci ratio: 5.489047e-01	ci left: 1.315994e-05	ci right 2.337538e-05	k: 50	n:2820000
Cons ci ratio: 1.390070e-06	ci left: 9.999987e-01	ci right 1	k: 2820000	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
POLDIP2   2820000 perm   3479 sec   (811 perm/sec)   p_kst 3.546099e-07   p_cons 1   p_joint 1.773050e-05

Joint ci ratio: 5.436011e-01	ci left: 1.341800e-05	ci right 2.369448e-05	k: 51	n:2830000
Cons ci ratio: 1.385158e-06	ci left: 9.999987e-01	ci right 1	k: 2830000	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
POLDIP2   2830000 perm   3502 sec   (808 perm/sec)   p_kst 3.533569e-07   p_cons 1   p_joint 1.802120e-05

Joint ci ratio: 5.436011e-01	ci left: 1.337075e-05	ci right 2.361105e-05	k: 51	n:2840000
Cons ci ratio: 1.380281e-06	ci left: 9.999987e-01	ci right 1	k: 2840000	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
POLDIP2   2840000 perm   3527 sec   (805 perm/sec)   p_kst 3.521127e-07   p_cons 1   p_joint 1.795775e-05

Joint ci ratio: 5.436011e-01	ci left: 1.332384e-05	ci right 2.352821e-05	k: 51	n:2850000
Cons ci ratio: 1.375438e-06	ci left: 9.999987e-01	ci right 1	k: 2850000	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
POLDIP2   2850000 perm   3553 sec   (802 perm/sec)   p_kst 3.508772e-07   p_cons 1   p_joint 1.789474e-05

Joint ci ratio: 5.436012e-01	ci left: 1.327725e-05	ci right 2.344594e-05	k: 51	n:2860000
Cons ci ratio: 1.370628e-06	ci left: 9.999987e-01	ci right 1	k: 2860000	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
POLDIP2   2860000 perm   3576 sec   (800 perm/sec)   p_kst 3.496503e-07   p_cons 1   p_joint 1.783217e-05

Joint ci ratio: 5.384483e-01	ci left: 1.353177e-05	ci right 2.375989e-05	k: 52	n:2870000
Cons ci ratio: 1.365853e-06	ci left: 9.999987e-01	ci right 1	k: 2870000	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
POLDIP2   2870000 perm   3601 sec   (797 perm/sec)   p_kst 3.484321e-07   p_cons 1   p_joint 1.811847e-05

Joint ci ratio: 5.384484e-01	ci left: 1.348478e-05	ci right 2.367739e-05	k: 52	n:2880000
Cons ci ratio: 1.361110e-06	ci left: 9.999987e-01	ci right 1	k: 2880000	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
POLDIP2   2880000 perm   3624 sec   (795 perm/sec)   p_kst 3.472222e-07   p_cons 1   p_joint 1.805556e-05

Joint ci ratio: 5.384484e-01	ci left: 1.343812e-05	ci right 2.359546e-05	k: 52	n:2890000
Cons ci ratio: 1.356400e-06	ci left: 9.999987e-01	ci right 1	k: 2890000	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
POLDIP2   2890000 perm   3648 sec   (792 perm/sec)   p_kst 3.460208e-07   p_cons 1   p_joint 1.799308e-05

Joint ci ratio: 5.384484e-01	ci left: 1.339178e-05	ci right 2.351410e-05	k: 52	n:2900000
Cons ci ratio: 1.351723e-06	ci left: 9.999987e-01	ci right 1	k: 2900000	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
POLDIP2   2900000 perm   3672 sec   (790 perm/sec)   p_kst 3.448276e-07   p_cons 1   p_joint 1.793103e-05

Joint ci ratio: 5.384484e-01	ci left: 1.334576e-05	ci right 2.343330e-05	k: 52	n:2910000
Cons ci ratio: 1.347078e-06	ci left: 9.999987e-01	ci right 1	k: 2910000	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
POLDIP2   2910000 perm   3695 sec   (788 perm/sec)   p_kst 3.436426e-07   p_cons 1   p_joint 1.786942e-05

Joint ci ratio: 5.334394e-01	ci left: 1.359614e-05	ci right 2.374148e-05	k: 53	n:2920000
Cons ci ratio: 1.342465e-06	ci left: 9.999987e-01	ci right 1	k: 2920000	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
POLDIP2   2920000 perm   3719 sec   (785 perm/sec)   p_kst 3.424658e-07   p_cons 1   p_joint 1.815068e-05

Joint ci ratio: 5.334394e-01	ci left: 1.354973e-05	ci right 2.366045e-05	k: 53	n:2930000
Cons ci ratio: 1.337883e-06	ci left: 9.999987e-01	ci right 1	k: 2930000	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
POLDIP2   2930000 perm   3742 sec   (783 perm/sec)   p_kst 3.412969e-07   p_cons 1   p_joint 1.808874e-05

Joint ci ratio: 5.334394e-01	ci left: 1.350365e-05	ci right 2.357997e-05	k: 53	n:2940000
Cons ci ratio: 1.333332e-06	ci left: 9.999987e-01	ci right 1	k: 2940000	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
POLDIP2   2940000 perm   3766 sec   (781 perm/sec)   p_kst 3.401361e-07   p_cons 1   p_joint 1.802721e-05

Joint ci ratio: 5.334395e-01	ci left: 1.345787e-05	ci right 2.350004e-05	k: 53	n:2950000
Cons ci ratio: 1.328813e-06	ci left: 9.999987e-01	ci right 1	k: 2950000	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
POLDIP2   2950000 perm   3789 sec   (779 perm/sec)   p_kst 3.389831e-07   p_cons 1   p_joint 1.796610e-05

Joint ci ratio: 5.334395e-01	ci left: 1.341241e-05	ci right 2.342065e-05	k: 53	n:2960000
Cons ci ratio: 1.324323e-06	ci left: 9.999988e-01	ci right 1	k: 2960000	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
POLDIP2   2960000 perm   3813 sec   (776 perm/sec)   p_kst 3.378378e-07   p_cons 1   p_joint 1.790541e-05

Joint ci ratio: 5.334395e-01	ci left: 1.336725e-05	ci right 2.334179e-05	k: 53	n:2970000
Cons ci ratio: 1.319864e-06	ci left: 9.999988e-01	ci right 1	k: 2970000	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
POLDIP2   2970000 perm   3837 sec   (774 perm/sec)   p_kst 3.367003e-07   p_cons 1   p_joint 1.784512e-05

Joint ci ratio: 5.334395e-01	ci left: 1.332239e-05	ci right 2.326346e-05	k: 53	n:2980000
Cons ci ratio: 1.315435e-06	ci left: 9.999988e-01	ci right 1	k: 2980000	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
POLDIP2   2980000 perm   3862 sec   (772 perm/sec)   p_kst 3.355705e-07   p_cons 1   p_joint 1.778523e-05

Joint ci ratio: 5.334395e-01	ci left: 1.327783e-05	ci right 2.318566e-05	k: 53	n:2990000
Cons ci ratio: 1.311036e-06	ci left: 9.999988e-01	ci right 1	k: 2990000	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
POLDIP2   2990000 perm   3886 sec   (770 perm/sec)   p_kst 3.344482e-07   p_cons 1   p_joint 1.772575e-05

Joint ci ratio: 5.334395e-01	ci left: 1.323357e-05	ci right 2.310837e-05	k: 53	n:3000000
Cons ci ratio: 1.306666e-06	ci left: 9.999988e-01	ci right 1	k: 3000000	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
POLDIP2   3000000 perm   3910 sec   (767 perm/sec)   p_kst 3.333333e-07   p_cons 1   p_joint 1.766667e-05

Joint ci ratio: 5.334396e-01	ci left: 1.318961e-05	ci right 2.303160e-05	k: 53	n:3010000
Cons ci ratio: 1.302325e-06	ci left: 9.999988e-01	ci right 1	k: 3010000	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
POLDIP2   3010000 perm   3934 sec   (765 perm/sec)   p_kst 3.322259e-07   p_cons 1   p_joint 1.760797e-05

Joint ci ratio: 5.334396e-01	ci left: 1.314593e-05	ci right 2.295534e-05	k: 53	n:3020000
Cons ci ratio: 1.298012e-06	ci left: 9.999988e-01	ci right 1	k: 3020000	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
POLDIP2   3020000 perm   3958 sec   (763 perm/sec)   p_kst 3.311258e-07   p_cons 1   p_joint 1.754967e-05

Joint ci ratio: 5.285678e-01	ci left: 1.338830e-05	ci right 2.325350e-05	k: 54	n:3030000
Cons ci ratio: 1.293729e-06	ci left: 9.999988e-01	ci right 1	k: 3030000	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
POLDIP2   3030000 perm   3983 sec   (761 perm/sec)   p_kst 3.300330e-07   p_cons 1   p_joint 1.782178e-05

Joint ci ratio: 5.285678e-01	ci left: 1.334426e-05	ci right 2.317701e-05	k: 54	n:3040000
Cons ci ratio: 1.289473e-06	ci left: 9.999988e-01	ci right 1	k: 3040000	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
POLDIP2   3040000 perm   4008 sec   (759 perm/sec)   p_kst 3.289474e-07   p_cons 1   p_joint 1.776316e-05

Joint ci ratio: 5.285678e-01	ci left: 1.330051e-05	ci right 2.310102e-05	k: 54	n:3050000
Cons ci ratio: 1.285245e-06	ci left: 9.999988e-01	ci right 1	k: 3050000	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
POLDIP2   3050000 perm   4032 sec   (756 perm/sec)   p_kst 3.278689e-07   p_cons 1   p_joint 1.770492e-05

Joint ci ratio: 5.285679e-01	ci left: 1.325704e-05	ci right 2.302552e-05	k: 54	n:3060000
Cons ci ratio: 1.281045e-06	ci left: 9.999988e-01	ci right 1	k: 3060000	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
POLDIP2   3060000 perm   4057 sec   (754 perm/sec)   p_kst 3.267974e-07   p_cons 1   p_joint 1.764706e-05

Joint ci ratio: 5.285679e-01	ci left: 1.321386e-05	ci right 2.295052e-05	k: 54	n:3070000
Cons ci ratio: 1.276872e-06	ci left: 9.999988e-01	ci right 1	k: 3070000	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
POLDIP2   3070000 perm   4082 sec   (752 perm/sec)   p_kst 3.257329e-07   p_cons 1   p_joint 1.758958e-05

Joint ci ratio: 5.285679e-01	ci left: 1.317096e-05	ci right 2.287601e-05	k: 54	n:3080000
Cons ci ratio: 1.272726e-06	ci left: 9.999988e-01	ci right 1	k: 3080000	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
POLDIP2   3080000 perm   4106 sec   (750 perm/sec)   p_kst 3.246753e-07   p_cons 1   p_joint 1.753247e-05

Joint ci ratio: 5.285679e-01	ci left: 1.312833e-05	ci right 2.280197e-05	k: 54	n:3090000
Cons ci ratio: 1.268608e-06	ci left: 9.999988e-01	ci right 1	k: 3090000	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
POLDIP2   3090000 perm   4131 sec   (748 perm/sec)   p_kst 3.236246e-07   p_cons 1   p_joint 1.747573e-05

Joint ci ratio: 5.285679e-01	ci left: 1.308598e-05	ci right 2.272842e-05	k: 54	n:3100000
Cons ci ratio: 1.264515e-06	ci left: 9.999988e-01	ci right 1	k: 3100000	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
POLDIP2   3100000 perm   4156 sec   (746 perm/sec)   p_kst 3.225806e-07   p_cons 1   p_joint 1.741935e-05

Joint ci ratio: 5.285679e-01	ci left: 1.304390e-05	ci right 2.265534e-05	k: 54	n:3110000
Cons ci ratio: 1.260449e-06	ci left: 9.999988e-01	ci right 1	k: 3110000	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
POLDIP2   3110000 perm   4180 sec   (744 perm/sec)   p_kst 3.215434e-07   p_cons 1   p_joint 1.736334e-05

Joint ci ratio: 5.285679e-01	ci left: 1.300210e-05	ci right 2.258272e-05	k: 54	n:3120000
Cons ci ratio: 1.256409e-06	ci left: 9.999988e-01	ci right 1	k: 3120000	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
POLDIP2   3120000 perm   4205 sec   (742 perm/sec)   p_kst 3.205128e-07   p_cons 1   p_joint 1.730769e-05

Joint ci ratio: 5.238273e-01	ci left: 1.323758e-05	ci right 2.287216e-05	k: 55	n:3130000
Cons ci ratio: 1.252395e-06	ci left: 9.999988e-01	ci right 1	k: 3130000	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
POLDIP2   3130000 perm   4230 sec   (740 perm/sec)   p_kst 3.194888e-07   p_cons 1   p_joint 1.757188e-05

Joint ci ratio: 5.238273e-01	ci left: 1.319542e-05	ci right 2.279932e-05	k: 55	n:3140000
Cons ci ratio: 1.248407e-06	ci left: 9.999988e-01	ci right 1	k: 3140000	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
POLDIP2   3140000 perm   4255 sec   (738 perm/sec)   p_kst 3.184713e-07   p_cons 1   p_joint 1.751592e-05

Joint ci ratio: 5.238273e-01	ci left: 1.315353e-05	ci right 2.272694e-05	k: 55	n:3150000
Cons ci ratio: 1.244444e-06	ci left: 9.999988e-01	ci right 1	k: 3150000	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
POLDIP2   3150000 perm   4281 sec   (736 perm/sec)   p_kst 3.174603e-07   p_cons 1   p_joint 1.746032e-05

Joint ci ratio: 5.238273e-01	ci left: 1.311190e-05	ci right 2.265502e-05	k: 55	n:3160000
Cons ci ratio: 1.240506e-06	ci left: 9.999988e-01	ci right 1	k: 3160000	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
POLDIP2   3160000 perm   4306 sec   (734 perm/sec)   p_kst 3.164557e-07   p_cons 1   p_joint 1.740506e-05

Joint ci ratio: 5.238273e-01	ci left: 1.307054e-05	ci right 2.258356e-05	k: 55	n:3170000
Cons ci ratio: 1.236592e-06	ci left: 9.999988e-01	ci right 1	k: 3170000	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
POLDIP2   3170000 perm   4331 sec   (732 perm/sec)   p_kst 3.154574e-07   p_cons 1   p_joint 1.735016e-05

Joint ci ratio: 5.238273e-01	ci left: 1.302944e-05	ci right 2.251254e-05	k: 55	n:3180000
Cons ci ratio: 1.232704e-06	ci left: 9.999988e-01	ci right 1	k: 3180000	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
POLDIP2   3180000 perm   4357 sec   (730 perm/sec)   p_kst 3.144654e-07   p_cons 1   p_joint 1.729560e-05

Joint ci ratio: 5.238274e-01	ci left: 1.298859e-05	ci right 2.244197e-05	k: 55	n:3190000
Cons ci ratio: 1.228839e-06	ci left: 9.999988e-01	ci right 1	k: 3190000	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
POLDIP2   3190000 perm   4383 sec   (728 perm/sec)   p_kst 3.134796e-07   p_cons 1   p_joint 1.724138e-05

Joint ci ratio: 5.238274e-01	ci left: 1.294800e-05	ci right 2.237184e-05	k: 55	n:3200000
Cons ci ratio: 1.224999e-06	ci left: 9.999988e-01	ci right 1	k: 3200000	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
POLDIP2   3200000 perm   4409 sec   (726 perm/sec)   p_kst 3.125000e-07   p_cons 1   p_joint 1.718750e-05

Joint ci ratio: 5.238274e-01	ci left: 1.290767e-05	ci right 2.230214e-05	k: 55	n:3210000
Cons ci ratio: 1.221183e-06	ci left: 9.999989e-01	ci right 1	k: 3210000	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
POLDIP2   3210000 perm   4435 sec   (724 perm/sec)   p_kst 3.115265e-07   p_cons 1   p_joint 1.713396e-05

Joint ci ratio: 5.238274e-01	ci left: 1.286758e-05	ci right 2.223288e-05	k: 55	n:3220000
Cons ci ratio: 1.217391e-06	ci left: 9.999989e-01	ci right 1	k: 3220000	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
POLDIP2   3220000 perm   4461 sec   (722 perm/sec)   p_kst 3.105590e-07   p_cons 1   p_joint 1.708075e-05

Joint ci ratio: 5.238274e-01	ci left: 1.282774e-05	ci right 2.216405e-05	k: 55	n:3230000
Cons ci ratio: 1.213622e-06	ci left: 9.999989e-01	ci right 1	k: 3230000	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
POLDIP2   3230000 perm   4487 sec   (720 perm/sec)   p_kst 3.095975e-07   p_cons 1   p_joint 1.702786e-05

Joint ci ratio: 5.238274e-01	ci left: 1.278815e-05	ci right 2.209564e-05	k: 55	n:3240000
Cons ci ratio: 1.209876e-06	ci left: 9.999989e-01	ci right 1	k: 3240000	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
POLDIP2   3240000 perm   4513 sec   (718 perm/sec)   p_kst 3.086420e-07   p_cons 1   p_joint 1.697531e-05

Joint ci ratio: 5.238274e-01	ci left: 1.274880e-05	ci right 2.202765e-05	k: 55	n:3250000
Cons ci ratio: 1.206153e-06	ci left: 9.999989e-01	ci right 1	k: 3250000	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
POLDIP2   3250000 perm   4538 sec   (716 perm/sec)   p_kst 3.076923e-07   p_cons 1   p_joint 1.692308e-05

Joint ci ratio: 5.238275e-01	ci left: 1.270970e-05	ci right 2.196009e-05	k: 55	n:3260000
Cons ci ratio: 1.202453e-06	ci left: 9.999989e-01	ci right 1	k: 3260000	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
POLDIP2   3260000 perm   4564 sec   (714 perm/sec)   p_kst 3.067485e-07   p_cons 1   p_joint 1.687117e-05

Joint ci ratio: 5.717866e-01	ci left: 1.029903e-05	ci right 1.876373e-05	k: 46	n:3270000
Cons ci ratio: 1.198776e-06	ci left: 9.999989e-01	ci right 1	k: 3270000	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
POLDIP2   3270000 perm   4590 sec   (712 perm/sec)   p_kst 3.058104e-07   p_cons 1   p_joint 1.406728e-05

Joint ci ratio: 5.599957e-01	ci left: 1.079008e-05	ci right 1.940271e-05	k: 48	n:3280000
Cons ci ratio: 1.195121e-06	ci left: 9.999989e-01	ci right 1	k: 3280000	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
POLDIP2   3280000 perm   4617 sec   (710 perm/sec)   p_kst 3.048780e-07   p_cons 1   p_joint 1.463415e-05

Joint ci ratio: 5.599957e-01	ci left: 1.075729e-05	ci right 1.934373e-05	k: 48	n:3290000
Cons ci ratio: 1.191489e-06	ci left: 9.999989e-01	ci right 1	k: 3290000	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
POLDIP2   3290000 perm   4643 sec   (709 perm/sec)   p_kst 3.039514e-07   p_cons 1   p_joint 1.458967e-05

Joint ci ratio: 5.599958e-01	ci left: 1.072469e-05	ci right 1.928512e-05	k: 48	n:3300000
Cons ci ratio: 1.187878e-06	ci left: 9.999989e-01	ci right 1	k: 3300000	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
POLDIP2   3300000 perm   4669 sec   (707 perm/sec)   p_kst 3.030303e-07   p_cons 1   p_joint 1.454545e-05

Joint ci ratio: 5.599958e-01	ci left: 1.069229e-05	ci right 1.922685e-05	k: 48	n:3310000
Cons ci ratio: 1.184289e-06	ci left: 9.999989e-01	ci right 1	k: 3310000	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
POLDIP2   3310000 perm   4697 sec   (705 perm/sec)   p_kst 3.021148e-07   p_cons 1   p_joint 1.450151e-05

Joint ci ratio: 5.599958e-01	ci left: 1.066008e-05	ci right 1.916894e-05	k: 48	n:3320000
Cons ci ratio: 1.180722e-06	ci left: 9.999989e-01	ci right 1	k: 3320000	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
POLDIP2   3320000 perm   4724 sec   (703 perm/sec)   p_kst 3.012048e-07   p_cons 1   p_joint 1.445783e-05

Joint ci ratio: 5.599958e-01	ci left: 1.062807e-05	ci right 1.911138e-05	k: 48	n:3330000
Cons ci ratio: 1.177176e-06	ci left: 9.999989e-01	ci right 1	k: 3330000	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
POLDIP2   3330000 perm   4751 sec   (701 perm/sec)   p_kst 3.003003e-07   p_cons 1   p_joint 1.441441e-05

Joint ci ratio: 5.599958e-01	ci left: 1.059625e-05	ci right 1.905416e-05	k: 48	n:3340000
Cons ci ratio: 1.173652e-06	ci left: 9.999989e-01	ci right 1	k: 3340000	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
POLDIP2   3340000 perm   4778 sec   (699 perm/sec)   p_kst 2.994012e-07   p_cons 1   p_joint 1.437126e-05

Joint ci ratio: 5.909583e-01	ci left: 9.289362e-06	ci right 1.728973e-05	k: 43	n:3350000
Cons ci ratio: 1.170149e-06	ci left: 9.999989e-01	ci right 1	k: 3350000	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
POLDIP2   3350000 perm   4805 sec   (697 perm/sec)   p_kst 2.985075e-07   p_cons 1   p_joint 1.283582e-05

Joint ci ratio: 5.909583e-01	ci left: 9.261715e-06	ci right 1.723827e-05	k: 43	n:3360000
Cons ci ratio: 1.166666e-06	ci left: 9.999989e-01	ci right 1	k: 3360000	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
POLDIP2   3360000 perm   4833 sec   (695 perm/sec)   p_kst 2.976190e-07   p_cons 1   p_joint 1.279762e-05

Joint ci ratio: 5.909583e-01	ci left: 9.234232e-06	ci right 1.718712e-05	k: 43	n:3370000
Cons ci ratio: 1.163204e-06	ci left: 9.999989e-01	ci right 1	k: 3370000	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
POLDIP2   3370000 perm   4859 sec   (694 perm/sec)   p_kst 2.967359e-07   p_cons 1   p_joint 1.275964e-05

Joint ci ratio: 5.909583e-01	ci left: 9.206912e-06	ci right 1.713627e-05	k: 43	n:3380000
Cons ci ratio: 1.159763e-06	ci left: 9.999989e-01	ci right 1	k: 3380000	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
POLDIP2   3380000 perm   4886 sec   (692 perm/sec)   p_kst 2.958580e-07   p_cons 1   p_joint 1.272189e-05

Joint ci ratio: 5.779685e-01	ci left: 9.682408e-06	ci right 1.776207e-05	k: 45	n:3390000
Cons ci ratio: 1.156342e-06	ci left: 9.999989e-01	ci right 1	k: 3390000	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
POLDIP2   3390000 perm   4914 sec   (690 perm/sec)   p_kst 2.949853e-07   p_cons 1   p_joint 1.327434e-05

Joint ci ratio: 6.823810e-01	ci left: 6.437649e-06	ci right 1.328658e-05	k: 32	n:3400000
Cons ci ratio: 1.152940e-06	ci left: 9.999989e-01	ci right 1	k: 3400000	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
POLDIP2   3400000 perm   4942 sec   (688 perm/sec)   p_kst 2.941176e-07   p_cons 1   p_joint 9.411765e-06

Joint ci ratio: 6.823810e-01	ci left: 6.418770e-06	ci right 1.324761e-05	k: 32	n:3410000
Cons ci ratio: 1.149559e-06	ci left: 9.999989e-01	ci right 1	k: 3410000	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
POLDIP2   3410000 perm   4970 sec   (686 perm/sec)   p_kst 2.932551e-07   p_cons 1   p_joint 9.384164e-06

Joint ci ratio: 6.722710e-01	ci left: 6.642021e-06	ci right 1.355093e-05	k: 33	n:3420000
Cons ci ratio: 1.146198e-06	ci left: 9.999989e-01	ci right 1	k: 3420000	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
POLDIP2   3420000 perm   4998 sec   (684 perm/sec)   p_kst 2.923977e-07   p_cons 1   p_joint 9.649123e-06

Joint ci ratio: 6.722710e-01	ci left: 6.622657e-06	ci right 1.351142e-05	k: 33	n:3430000
Cons ci ratio: 1.142856e-06	ci left: 9.999989e-01	ci right 1	k: 3430000	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
POLDIP2   3430000 perm   5026 sec   (682 perm/sec)   p_kst 2.915452e-07   p_cons 1   p_joint 9.620991e-06

Joint ci ratio: 6.625975e-01	ci left: 6.844773e-06	ci right 1.381148e-05	k: 34	n:3440000
Cons ci ratio: 1.139534e-06	ci left: 9.999989e-01	ci right 1	k: 3440000	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
POLDIP2   3440000 perm   5055 sec   (681 perm/sec)   p_kst 2.906977e-07   p_cons 1   p_joint 9.883721e-06

Joint ci ratio: 6.625975e-01	ci left: 6.824934e-06	ci right 1.377145e-05	k: 34	n:3450000
Cons ci ratio: 1.136231e-06	ci left: 9.999989e-01	ci right 1	k: 3450000	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
POLDIP2   3450000 perm   5083 sec   (679 perm/sec)   p_kst 2.898551e-07   p_cons 1   p_joint 9.855072e-06

Joint ci ratio: 6.625975e-01	ci left: 6.805208e-06	ci right 1.373165e-05	k: 34	n:3460000
Cons ci ratio: 1.132947e-06	ci left: 9.999989e-01	ci right 1	k: 3460000	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
POLDIP2   3460000 perm   5110 sec   (677 perm/sec)   p_kst 2.890173e-07   p_cons 1   p_joint 9.826590e-06

Joint ci ratio: 6.625975e-01	ci left: 6.785597e-06	ci right 1.369207e-05	k: 34	n:3470000
Cons ci ratio: 1.129682e-06	ci left: 9.999989e-01	ci right 1	k: 3470000	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
POLDIP2   3470000 perm   5138 sec   (675 perm/sec)   p_kst 2.881844e-07   p_cons 1   p_joint 9.798271e-06

Joint ci ratio: 6.625975e-01	ci left: 6.766098e-06	ci right 1.365273e-05	k: 34	n:3480000
Cons ci ratio: 1.126436e-06	ci left: 9.999989e-01	ci right 1	k: 3480000	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
POLDIP2   3480000 perm   5167 sec   (674 perm/sec)   p_kst 2.873563e-07   p_cons 1   p_joint 9.770115e-06

Joint ci ratio: 6.625975e-01	ci left: 6.746711e-06	ci right 1.361361e-05	k: 34	n:3490000
Cons ci ratio: 1.123209e-06	ci left: 9.999989e-01	ci right 1	k: 3490000	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
POLDIP2   3490000 perm   5195 sec   (672 perm/sec)   p_kst 2.865330e-07   p_cons 1   p_joint 9.742120e-06

Joint ci ratio: 6.625975e-01	ci left: 6.727434e-06	ci right 1.357471e-05	k: 34	n:3500000
Cons ci ratio: 1.119999e-06	ci left: 9.999989e-01	ci right 1	k: 3500000	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
POLDIP2   3500000 perm   5223 sec   (670 perm/sec)   p_kst 2.857143e-07   p_cons 1   p_joint 9.714286e-06

Joint ci ratio: 6.625975e-01	ci left: 6.708268e-06	ci right 1.353604e-05	k: 34	n:3510000
Cons ci ratio: 1.116808e-06	ci left: 9.999989e-01	ci right 1	k: 3510000	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
POLDIP2   3510000 perm   5251 sec   (668 perm/sec)   p_kst 2.849003e-07   p_cons 1   p_joint 9.686610e-06

Joint ci ratio: 6.625975e-01	ci left: 6.689210e-06	ci right 1.349759e-05	k: 34	n:3520000
Cons ci ratio: 1.113636e-06	ci left: 9.999990e-01	ci right 1	k: 3520000	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
POLDIP2   3520000 perm   5279 sec   (667 perm/sec)   p_kst 2.840909e-07   p_cons 1   p_joint 9.659091e-06

Joint ci ratio: 6.625976e-01	ci left: 6.670261e-06	ci right 1.345935e-05	k: 34	n:3530000
Cons ci ratio: 1.110481e-06	ci left: 9.999990e-01	ci right 1	k: 3530000	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
POLDIP2   3530000 perm   5306 sec   (665 perm/sec)   p_kst 2.832861e-07   p_cons 1   p_joint 9.631728e-06

Joint ci ratio: 6.533299e-01	ci left: 6.886671e-06	ci right 1.375040e-05	k: 35	n:3540000
Cons ci ratio: 1.107344e-06	ci left: 9.999990e-01	ci right 1	k: 3540000	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
POLDIP2   3540000 perm   5335 sec   (664 perm/sec)   p_kst 2.824859e-07   p_cons 1   p_joint 9.887006e-06

Joint ci ratio: 6.533299e-01	ci left: 6.867272e-06	ci right 1.371167e-05	k: 35	n:3550000
Cons ci ratio: 1.104225e-06	ci left: 9.999990e-01	ci right 1	k: 3550000	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
POLDIP2   3550000 perm   5363 sec   (662 perm/sec)   p_kst 2.816901e-07   p_cons 1   p_joint 9.859155e-06

Joint ci ratio: 6.533299e-01	ci left: 6.847982e-06	ci right 1.367316e-05	k: 35	n:3560000
Cons ci ratio: 1.101123e-06	ci left: 9.999990e-01	ci right 1	k: 3560000	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
POLDIP2   3560000 perm   5391 sec   (660 perm/sec)   p_kst 2.808989e-07   p_cons 1   p_joint 9.831461e-06

Joint ci ratio: 6.533299e-01	ci left: 6.828800e-06	ci right 1.363486e-05	k: 35	n:3570000
Cons ci ratio: 1.098039e-06	ci left: 9.999990e-01	ci right 1	k: 3570000	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
POLDIP2   3570000 perm   5419 sec   (659 perm/sec)   p_kst 2.801120e-07   p_cons 1   p_joint 9.803922e-06

Joint ci ratio: 6.533300e-01	ci left: 6.809725e-06	ci right 1.359677e-05	k: 35	n:3580000
Cons ci ratio: 1.094971e-06	ci left: 9.999990e-01	ci right 1	k: 3580000	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
POLDIP2   3580000 perm   5447 sec   (657 perm/sec)   p_kst 2.793296e-07   p_cons 1   p_joint 9.776536e-06

Joint ci ratio: 6.533300e-01	ci left: 6.790756e-06	ci right 1.355890e-05	k: 35	n:3590000
Cons ci ratio: 1.091921e-06	ci left: 9.999990e-01	ci right 1	k: 3590000	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
POLDIP2   3590000 perm   5476 sec   (656 perm/sec)   p_kst 2.785515e-07   p_cons 1   p_joint 9.749304e-06

Joint ci ratio: 6.533300e-01	ci left: 6.771893e-06	ci right 1.352123e-05	k: 35	n:3600000
Cons ci ratio: 1.088888e-06	ci left: 9.999990e-01	ci right 1	k: 3600000	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
POLDIP2   3600000 perm   5504 sec   (654 perm/sec)   p_kst 2.777778e-07   p_cons 1   p_joint 9.722222e-06

Joint ci ratio: 6.533300e-01	ci left: 6.753134e-06	ci right 1.348378e-05	k: 35	n:3610000
Cons ci ratio: 1.085872e-06	ci left: 9.999990e-01	ci right 1	k: 3610000	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
POLDIP2   3610000 perm   5533 sec   (652 perm/sec)   p_kst 2.770083e-07   p_cons 1   p_joint 9.695291e-06

Joint ci ratio: 6.533300e-01	ci left: 6.734479e-06	ci right 1.344653e-05	k: 35	n:3620000
Cons ci ratio: 1.082872e-06	ci left: 9.999990e-01	ci right 1	k: 3620000	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
POLDIP2   3620000 perm   5562 sec   (651 perm/sec)   p_kst 2.762431e-07   p_cons 1   p_joint 9.668508e-06

Joint ci ratio: 6.533300e-01	ci left: 6.715927e-06	ci right 1.340949e-05	k: 35	n:3630000
Cons ci ratio: 1.079889e-06	ci left: 9.999990e-01	ci right 1	k: 3630000	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
POLDIP2   3630000 perm   5592 sec   (649 perm/sec)   p_kst 2.754821e-07   p_cons 1   p_joint 9.641873e-06

Joint ci ratio: 6.533300e-01	ci left: 6.697477e-06	ci right 1.337265e-05	k: 35	n:3640000
Cons ci ratio: 1.076922e-06	ci left: 9.999990e-01	ci right 1	k: 3640000	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
POLDIP2   3640000 perm   5621 sec   (648 perm/sec)   p_kst 2.747253e-07   p_cons 1   p_joint 9.615385e-06

Joint ci ratio: 6.533300e-01	ci left: 6.679127e-06	ci right 1.333601e-05	k: 35	n:3650000
Cons ci ratio: 1.073972e-06	ci left: 9.999990e-01	ci right 1	k: 3650000	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
POLDIP2   3650000 perm   5650 sec   (646 perm/sec)   p_kst 2.739726e-07   p_cons 1   p_joint 9.589041e-06

Joint ci ratio: 6.533300e-01	ci left: 6.660878e-06	ci right 1.329957e-05	k: 35	n:3660000
Cons ci ratio: 1.071038e-06	ci left: 9.999990e-01	ci right 1	k: 3660000	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
POLDIP2   3660000 perm   5678 sec   (645 perm/sec)   p_kst 2.732240e-07   p_cons 1   p_joint 9.562842e-06

Joint ci ratio: 6.533300e-01	ci left: 6.642729e-06	ci right 1.326333e-05	k: 35	n:3670000
Cons ci ratio: 1.068119e-06	ci left: 9.999990e-01	ci right 1	k: 3670000	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
POLDIP2   3670000 perm   5708 sec   (643 perm/sec)   p_kst 2.724796e-07   p_cons 1   p_joint 9.536785e-06

Joint ci ratio: 6.533300e-01	ci left: 6.624678e-06	ci right 1.322729e-05	k: 35	n:3680000
Cons ci ratio: 1.065217e-06	ci left: 9.999990e-01	ci right 1	k: 3680000	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
POLDIP2   3680000 perm   5737 sec   (641 perm/sec)   p_kst 2.717391e-07   p_cons 1   p_joint 9.510870e-06

Joint ci ratio: 6.444407e-01	ci left: 6.833060e-06	ci right 1.350653e-05	k: 36	n:3690000
Cons ci ratio: 1.062330e-06	ci left: 9.999990e-01	ci right 1	k: 3690000	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
POLDIP2   3690000 perm   5767 sec   (640 perm/sec)   p_kst 2.710027e-07   p_cons 1   p_joint 9.756098e-06

Joint ci ratio: 6.444407e-01	ci left: 6.814592e-06	ci right 1.347002e-05	k: 36	n:3700000
Cons ci ratio: 1.059459e-06	ci left: 9.999990e-01	ci right 1	k: 3700000	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
POLDIP2   3700000 perm   5796 sec   (638 perm/sec)   p_kst 2.702703e-07   p_cons 1   p_joint 9.729730e-06

Joint ci ratio: 6.444407e-01	ci left: 6.796224e-06	ci right 1.343371e-05	k: 36	n:3710000
Cons ci ratio: 1.056603e-06	ci left: 9.999990e-01	ci right 1	k: 3710000	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
POLDIP2   3710000 perm   5825 sec   (637 perm/sec)   p_kst 2.695418e-07   p_cons 1   p_joint 9.703504e-06

Joint ci ratio: 6.359046e-01	ci left: 7.003078e-06	ci right 1.370955e-05	k: 37	n:3720000
Cons ci ratio: 1.053763e-06	ci left: 9.999990e-01	ci right 1	k: 3720000	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
POLDIP2   3720000 perm   5855 sec   (635 perm/sec)   p_kst 2.688172e-07   p_cons 1   p_joint 9.946237e-06

Joint ci ratio: 6.359046e-01	ci left: 6.984303e-06	ci right 1.367280e-05	k: 37	n:3730000
Cons ci ratio: 1.050938e-06	ci left: 9.999990e-01	ci right 1	k: 3730000	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
POLDIP2   3730000 perm   5885 sec   (634 perm/sec)   p_kst 2.680965e-07   p_cons 1   p_joint 9.919571e-06

Joint ci ratio: 6.359047e-01	ci left: 6.965628e-06	ci right 1.363624e-05	k: 37	n:3740000
Cons ci ratio: 1.048128e-06	ci left: 9.999990e-01	ci right 1	k: 3740000	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
POLDIP2   3740000 perm   5915 sec   (632 perm/sec)   p_kst 2.673797e-07   p_cons 1   p_joint 9.893048e-06

Joint ci ratio: 6.359047e-01	ci left: 6.947053e-06	ci right 1.359987e-05	k: 37	n:3750000
Cons ci ratio: 1.045333e-06	ci left: 9.999990e-01	ci right 1	k: 3750000	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
POLDIP2   3750000 perm   5945 sec   (631 perm/sec)   p_kst 2.666667e-07   p_cons 1   p_joint 9.866667e-06

Joint ci ratio: 6.359047e-01	ci left: 6.928577e-06	ci right 1.356371e-05	k: 37	n:3760000
Cons ci ratio: 1.042553e-06	ci left: 9.999990e-01	ci right 1	k: 3760000	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
POLDIP2   3760000 perm   5974 sec   (629 perm/sec)   p_kst 2.659574e-07   p_cons 1   p_joint 9.840426e-06

Joint ci ratio: 6.359047e-01	ci left: 6.910199e-06	ci right 1.352773e-05	k: 37	n:3770000
Cons ci ratio: 1.039787e-06	ci left: 9.999990e-01	ci right 1	k: 3770000	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
POLDIP2   3770000 perm   6004 sec   (628 perm/sec)   p_kst 2.652520e-07   p_cons 1   p_joint 9.814324e-06

Joint ci ratio: 6.359047e-01	ci left: 6.891918e-06	ci right 1.349194e-05	k: 37	n:3780000
Cons ci ratio: 1.037036e-06	ci left: 9.999990e-01	ci right 1	k: 3780000	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
POLDIP2   3780000 perm   6034 sec   (626 perm/sec)   p_kst 2.645503e-07   p_cons 1   p_joint 9.788360e-06

Joint ci ratio: 6.359047e-01	ci left: 6.873733e-06	ci right 1.345634e-05	k: 37	n:3790000
Cons ci ratio: 1.034300e-06	ci left: 9.999990e-01	ci right 1	k: 3790000	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
POLDIP2   3790000 perm   6065 sec   (625 perm/sec)   p_kst 2.638522e-07   p_cons 1   p_joint 9.762533e-06

Joint ci ratio: 6.359047e-01	ci left: 6.855644e-06	ci right 1.342093e-05	k: 37	n:3800000
Cons ci ratio: 1.031578e-06	ci left: 9.999990e-01	ci right 1	k: 3800000	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
POLDIP2   3800000 perm   6095 sec   (623 perm/sec)   p_kst 2.631579e-07   p_cons 1   p_joint 9.736842e-06

Joint ci ratio: 6.359047e-01	ci left: 6.837651e-06	ci right 1.338570e-05	k: 37	n:3810000
Cons ci ratio: 1.028871e-06	ci left: 9.999990e-01	ci right 1	k: 3810000	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
POLDIP2   3810000 perm   6125 sec   (622 perm/sec)   p_kst 2.624672e-07   p_cons 1   p_joint 9.711286e-06

Joint ci ratio: 6.359047e-01	ci left: 6.819751e-06	ci right 1.335066e-05	k: 37	n:3820000
Cons ci ratio: 1.026177e-06	ci left: 9.999990e-01	ci right 1	k: 3820000	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
POLDIP2   3820000 perm   6156 sec   (621 perm/sec)   p_kst 2.617801e-07   p_cons 1   p_joint 9.685864e-06

Joint ci ratio: 6.359047e-01	ci left: 6.801945e-06	ci right 1.331580e-05	k: 37	n:3830000
Cons ci ratio: 1.023498e-06	ci left: 9.999990e-01	ci right 1	k: 3830000	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
POLDIP2   3830000 perm   6187 sec   (619 perm/sec)   p_kst 2.610966e-07   p_cons 1   p_joint 9.660574e-06

Joint ci ratio: 6.625978e-01	ci left: 6.131775e-06	ci right 1.237279e-05	k: 34	n:3840000
Cons ci ratio: 1.020833e-06	ci left: 9.999990e-01	ci right 1	k: 3840000	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
POLDIP2   3840000 perm   6217 sec   (618 perm/sec)   p_kst 2.604167e-07   p_cons 1   p_joint 8.854167e-06

Joint ci ratio: 6.625978e-01	ci left: 6.115849e-06	ci right 1.234065e-05	k: 34	n:3850000
Cons ci ratio: 1.018181e-06	ci left: 9.999990e-01	ci right 1	k: 3850000	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
POLDIP2   3850000 perm   6249 sec   (616 perm/sec)   p_kst 2.597403e-07   p_cons 1   p_joint 8.831169e-06

Joint ci ratio: 6.625978e-01	ci left: 6.100004e-06	ci right 1.230868e-05	k: 34	n:3860000
Cons ci ratio: 1.015544e-06	ci left: 9.999990e-01	ci right 1	k: 3860000	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
POLDIP2   3860000 perm   6281 sec   (615 perm/sec)   p_kst 2.590674e-07   p_cons 1   p_joint 8.808290e-06

Joint ci ratio: 6.625979e-01	ci left: 6.084242e-06	ci right 1.227688e-05	k: 34	n:3870000
Cons ci ratio: 1.012919e-06	ci left: 9.999990e-01	ci right 1	k: 3870000	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
POLDIP2   3870000 perm   6312 sec   (613 perm/sec)   p_kst 2.583979e-07   p_cons 1   p_joint 8.785530e-06

Joint ci ratio: 6.625979e-01	ci left: 6.068561e-06	ci right 1.224523e-05	k: 34	n:3880000
Cons ci ratio: 1.010309e-06	ci left: 9.999990e-01	ci right 1	k: 3880000	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
POLDIP2   3880000 perm   6343 sec   (612 perm/sec)   p_kst 2.577320e-07   p_cons 1   p_joint 8.762887e-06

Joint ci ratio: 6.625979e-01	ci left: 6.052961e-06	ci right 1.221376e-05	k: 34	n:3890000
Cons ci ratio: 1.007712e-06	ci left: 9.999991e-01	ci right 1	k: 3890000	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
POLDIP2   3890000 perm   6374 sec   (610 perm/sec)   p_kst 2.570694e-07   p_cons 1   p_joint 8.740360e-06

Joint ci ratio: 6.625979e-01	ci left: 6.037440e-06	ci right 1.218244e-05	k: 34	n:3900000
Cons ci ratio: 1.005128e-06	ci left: 9.999991e-01	ci right 1	k: 3900000	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
POLDIP2   3900000 perm   6406 sec   (609 perm/sec)   p_kst 2.564103e-07   p_cons 1   p_joint 8.717949e-06

Joint ci ratio: 6.533302e-01	ci left: 6.234990e-06	ci right 1.244922e-05	k: 35	n:3910000
Cons ci ratio: 1.002557e-06	ci left: 9.999991e-01	ci right 1	k: 3910000	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
POLDIP2   3910000 perm   6437 sec   (607 perm/sec)   p_kst 2.557545e-07   p_cons 1   p_joint 8.951407e-06

Joint ci ratio: 6.533302e-01	ci left: 6.219085e-06	ci right 1.241746e-05	k: 35	n:3920000
Cons ci ratio: 9.999995e-07	ci left: 9.999991e-01	ci right 1	k: 3920000	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
POLDIP2   3920000 perm   6468 sec   (606 perm/sec)   p_kst 2.551020e-07   p_cons 1   p_joint 8.928571e-06

Joint ci ratio: 6.533303e-01	ci left: 6.203260e-06	ci right 1.238586e-05	k: 35	n:3930000
Cons ci ratio: 9.974550e-07	ci left: 9.999991e-01	ci right 1	k: 3930000	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
POLDIP2   3930000 perm   6499 sec   (605 perm/sec)   p_kst 2.544529e-07   p_cons 1   p_joint 8.905852e-06

Joint ci ratio: 6.533303e-01	ci left: 6.187516e-06	ci right 1.235443e-05	k: 35	n:3940000
Cons ci ratio: 9.949234e-07	ci left: 9.999991e-01	ci right 1	k: 3940000	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
POLDIP2   3940000 perm   6531 sec   (603 perm/sec)   p_kst 2.538071e-07   p_cons 1   p_joint 8.883249e-06

Joint ci ratio: 6.533303e-01	ci left: 6.171851e-06	ci right 1.232315e-05	k: 35	n:3950000
Cons ci ratio: 9.924046e-07	ci left: 9.999991e-01	ci right 1	k: 3950000	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
POLDIP2   3950000 perm   6562 sec   (602 perm/sec)   p_kst 2.531646e-07   p_cons 1   p_joint 8.860759e-06

Joint ci ratio: 6.625979e-01	ci left: 5.945964e-06	ci right 1.199786e-05	k: 34	n:3960000
Cons ci ratio: 9.898985e-07	ci left: 9.999991e-01	ci right 1	k: 3960000	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
POLDIP2   3960000 perm   6594 sec   (601 perm/sec)   p_kst 2.525253e-07   p_cons 1   p_joint 8.585859e-06

Joint ci ratio: 6.625979e-01	ci left: 5.930986e-06	ci right 1.196764e-05	k: 34	n:3970000
Cons ci ratio: 9.874050e-07	ci left: 9.999991e-01	ci right 1	k: 3970000	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
POLDIP2   3970000 perm   6626 sec   (599 perm/sec)   p_kst 2.518892e-07   p_cons 1   p_joint 8.564232e-06

Joint ci ratio: 6.625979e-01	ci left: 5.916085e-06	ci right 1.193757e-05	k: 34	n:3980000
Cons ci ratio: 9.849241e-07	ci left: 9.999991e-01	ci right 1	k: 3980000	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
POLDIP2   3980000 perm   6657 sec   (598 perm/sec)   p_kst 2.512563e-07   p_cons 1   p_joint 8.542714e-06

Joint ci ratio: 6.625979e-01	ci left: 5.901257e-06	ci right 1.190765e-05	k: 34	n:3990000
Cons ci ratio: 9.824556e-07	ci left: 9.999991e-01	ci right 1	k: 3990000	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
POLDIP2   3990000 perm   6689 sec   (597 perm/sec)   p_kst 2.506266e-07   p_cons 1   p_joint 8.521303e-06

Joint ci ratio: 6.625980e-01	ci left: 5.886504e-06	ci right 1.187788e-05	k: 34	n:4000000
Cons ci ratio: 9.799995e-07	ci left: 9.999991e-01	ci right 1	k: 4000000	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
POLDIP2   4000000 perm   6720 sec   (595 perm/sec)   p_kst 2.500000e-07   p_cons 1   p_joint 8.500000e-06

Joint ci ratio: 6.625980e-01	ci left: 5.871824e-06	ci right 1.184826e-05	k: 34	n:4010000
Cons ci ratio: 9.775556e-07	ci left: 9.999991e-01	ci right 1	k: 4010000	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
POLDIP2   4010000 perm   6752 sec   (594 perm/sec)   p_kst 2.493766e-07   p_cons 1   p_joint 8.478803e-06

Joint ci ratio: 6.625980e-01	ci left: 5.857218e-06	ci right 1.181878e-05	k: 34	n:4020000
Cons ci ratio: 9.751239e-07	ci left: 9.999991e-01	ci right 1	k: 4020000	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
POLDIP2   4020000 perm   6784 sec   (593 perm/sec)   p_kst 2.487562e-07   p_cons 1   p_joint 8.457711e-06

Joint ci ratio: 6.625980e-01	ci left: 5.842684e-06	ci right 1.178946e-05	k: 34	n:4030000
Cons ci ratio: 9.727042e-07	ci left: 9.999991e-01	ci right 1	k: 4030000	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
POLDIP2   4030000 perm   6816 sec   (591 perm/sec)   p_kst 2.481390e-07   p_cons 1   p_joint 8.436725e-06

Joint ci ratio: 6.625980e-01	ci left: 5.828222e-06	ci right 1.176028e-05	k: 34	n:4040000
Cons ci ratio: 9.702965e-07	ci left: 9.999991e-01	ci right 1	k: 4040000	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
POLDIP2   4040000 perm   6848 sec   (590 perm/sec)   p_kst 2.475248e-07   p_cons 1   p_joint 8.415842e-06

Joint ci ratio: 6.625980e-01	ci left: 5.813831e-06	ci right 1.173124e-05	k: 34	n:4050000
Cons ci ratio: 9.679008e-07	ci left: 9.999991e-01	ci right 1	k: 4050000	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
POLDIP2   4050000 perm   6880 sec   (589 perm/sec)   p_kst 2.469136e-07   p_cons 1   p_joint 8.395062e-06

Joint ci ratio: 6.625980e-01	ci left: 5.799511e-06	ci right 1.170234e-05	k: 34	n:4060000
Cons ci ratio: 9.655168e-07	ci left: 9.999991e-01	ci right 1	k: 4060000	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
POLDIP2   4060000 perm   6912 sec   (587 perm/sec)   p_kst 2.463054e-07   p_cons 1   p_joint 8.374384e-06

Joint ci ratio: 6.625980e-01	ci left: 5.785262e-06	ci right 1.167359e-05	k: 34	n:4070000
Cons ci ratio: 9.631445e-07	ci left: 9.999991e-01	ci right 1	k: 4070000	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
POLDIP2   4070000 perm   6945 sec   (586 perm/sec)   p_kst 2.457002e-07   p_cons 1   p_joint 8.353808e-06

Joint ci ratio: 6.625980e-01	ci left: 5.771082e-06	ci right 1.164498e-05	k: 34	n:4080000
Cons ci ratio: 9.607838e-07	ci left: 9.999991e-01	ci right 1	k: 4080000	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
POLDIP2   4080000 perm   6977 sec   (585 perm/sec)   p_kst 2.450980e-07   p_cons 1   p_joint 8.333333e-06

Joint ci ratio: 6.625980e-01	ci left: 5.756972e-06	ci right 1.161651e-05	k: 34	n:4090000
Cons ci ratio: 9.584347e-07	ci left: 9.999991e-01	ci right 1	k: 4090000	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
POLDIP2   4090000 perm   7010 sec   (583 perm/sec)   p_kst 2.444988e-07   p_cons 1   p_joint 8.312958e-06

Joint ci ratio: 6.625980e-01	ci left: 5.742931e-06	ci right 1.158817e-05	k: 34	n:4100000
Cons ci ratio: 9.560971e-07	ci left: 9.999991e-01	ci right 1	k: 4100000	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
POLDIP2   4100000 perm   7042 sec   (582 perm/sec)   p_kst 2.439024e-07   p_cons 1   p_joint 8.292683e-06

Joint ci ratio: 6.625980e-01	ci left: 5.728958e-06	ci right 1.155998e-05	k: 34	n:4110000
Cons ci ratio: 9.537708e-07	ci left: 9.999991e-01	ci right 1	k: 4110000	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
POLDIP2   4110000 perm   7074 sec   (581 perm/sec)   p_kst 2.433090e-07   p_cons 1   p_joint 8.272506e-06

Joint ci ratio: 6.625980e-01	ci left: 5.715052e-06	ci right 1.153192e-05	k: 34	n:4120000
Cons ci ratio: 9.514558e-07	ci left: 9.999991e-01	ci right 1	k: 4120000	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
POLDIP2   4120000 perm   7107 sec   (580 perm/sec)   p_kst 2.427184e-07   p_cons 1   p_joint 8.252427e-06

Joint ci ratio: 6.625980e-01	ci left: 5.701214e-06	ci right 1.150400e-05	k: 34	n:4130000
Cons ci ratio: 9.491521e-07	ci left: 9.999991e-01	ci right 1	k: 4130000	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
POLDIP2   4130000 perm   7140 sec   (578 perm/sec)   p_kst 2.421308e-07   p_cons 1   p_joint 8.232446e-06

Joint ci ratio: 6.625981e-01	ci left: 5.687443e-06	ci right 1.147621e-05	k: 34	n:4140000
Cons ci ratio: 9.468594e-07	ci left: 9.999991e-01	ci right 1	k: 4140000	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
POLDIP2   4140000 perm   7173 sec   (577 perm/sec)   p_kst 2.415459e-07   p_cons 1   p_joint 8.212560e-06

Joint ci ratio: 6.625981e-01	ci left: 5.673739e-06	ci right 1.144856e-05	k: 34	n:4150000
Cons ci ratio: 9.445779e-07	ci left: 9.999991e-01	ci right 1	k: 4150000	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
POLDIP2   4150000 perm   7206 sec   (576 perm/sec)   p_kst 2.409639e-07   p_cons 1   p_joint 8.192771e-06

Joint ci ratio: 6.533304e-01	ci left: 5.860291e-06	ci right 1.170107e-05	k: 35	n:4160000
Cons ci ratio: 9.423072e-07	ci left: 9.999991e-01	ci right 1	k: 4160000	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
POLDIP2   4160000 perm   7238 sec   (575 perm/sec)   p_kst 2.403846e-07   p_cons 1   p_joint 8.413462e-06

Joint ci ratio: 6.533304e-01	ci left: 5.846238e-06	ci right 1.167301e-05	k: 35	n:4170000
Cons ci ratio: 9.400475e-07	ci left: 9.999991e-01	ci right 1	k: 4170000	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
POLDIP2   4170000 perm   7271 sec   (573 perm/sec)   p_kst 2.398082e-07   p_cons 1   p_joint 8.393285e-06

Joint ci ratio: 6.533304e-01	ci left: 5.832251e-06	ci right 1.164508e-05	k: 35	n:4180000
Cons ci ratio: 9.377986e-07	ci left: 9.999991e-01	ci right 1	k: 4180000	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
POLDIP2   4180000 perm   7305 sec   (572 perm/sec)   p_kst 2.392344e-07   p_cons 1   p_joint 8.373206e-06

Joint ci ratio: 6.533304e-01	ci left: 5.818332e-06	ci right 1.161729e-05	k: 35	n:4190000
Cons ci ratio: 9.355604e-07	ci left: 9.999991e-01	ci right 1	k: 4190000	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
POLDIP2   4190000 perm   7338 sec   (571 perm/sec)   p_kst 2.386635e-07   p_cons 1   p_joint 8.353222e-06

Joint ci ratio: 6.533305e-01	ci left: 5.804479e-06	ci right 1.158963e-05	k: 35	n:4200000
Cons ci ratio: 9.333329e-07	ci left: 9.999991e-01	ci right 1	k: 4200000	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
POLDIP2   4200000 perm   7371 sec   (570 perm/sec)   p_kst 2.380952e-07   p_cons 1   p_joint 8.333333e-06

Joint ci ratio: 6.533305e-01	ci left: 5.790691e-06	ci right 1.156210e-05	k: 35	n:4210000
Cons ci ratio: 9.311159e-07	ci left: 9.999991e-01	ci right 1	k: 4210000	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
POLDIP2   4210000 perm   7405 sec   (569 perm/sec)   p_kst 2.375297e-07   p_cons 1   p_joint 8.313539e-06

Joint ci ratio: 6.533305e-01	ci left: 5.776969e-06	ci right 1.153470e-05	k: 35	n:4220000
Cons ci ratio: 9.289095e-07	ci left: 9.999991e-01	ci right 1	k: 4220000	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
POLDIP2   4220000 perm   7439 sec   (567 perm/sec)   p_kst 2.369668e-07   p_cons 1   p_joint 8.293839e-06

Joint ci ratio: 6.533305e-01	ci left: 5.763312e-06	ci right 1.150743e-05	k: 35	n:4230000
Cons ci ratio: 9.267135e-07	ci left: 9.999991e-01	ci right 1	k: 4230000	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
POLDIP2   4230000 perm   7473 sec   (566 perm/sec)   p_kst 2.364066e-07   p_cons 1   p_joint 8.274232e-06

Joint ci ratio: 6.533305e-01	ci left: 5.749719e-06	ci right 1.148029e-05	k: 35	n:4240000
Cons ci ratio: 9.245279e-07	ci left: 9.999991e-01	ci right 1	k: 4240000	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
POLDIP2   4240000 perm   7508 sec   (565 perm/sec)   p_kst 2.358491e-07   p_cons 1   p_joint 8.254717e-06

Joint ci ratio: 6.533305e-01	ci left: 5.736191e-06	ci right 1.145328e-05	k: 35	n:4250000
Cons ci ratio: 9.223525e-07	ci left: 9.999991e-01	ci right 1	k: 4250000	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
POLDIP2   4250000 perm   7543 sec   (563 perm/sec)   p_kst 2.352941e-07   p_cons 1   p_joint 8.235294e-06

Joint ci ratio: 6.533305e-01	ci left: 5.722725e-06	ci right 1.142640e-05	k: 35	n:4260000
Cons ci ratio: 9.201874e-07	ci left: 9.999991e-01	ci right 1	k: 4260000	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
POLDIP2   4260000 perm   7578 sec   (562 perm/sec)   p_kst 2.347418e-07   p_cons 1   p_joint 8.215962e-06

Joint ci ratio: 6.533305e-01	ci left: 5.709323e-06	ci right 1.139964e-05	k: 35	n:4270000
Cons ci ratio: 9.180324e-07	ci left: 9.999991e-01	ci right 1	k: 4270000	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
POLDIP2   4270000 perm   7613 sec   (561 perm/sec)   p_kst 2.341920e-07   p_cons 1   p_joint 8.196721e-06

Joint ci ratio: 6.533305e-01	ci left: 5.695984e-06	ci right 1.137300e-05	k: 35	n:4280000
Cons ci ratio: 9.158874e-07	ci left: 9.999991e-01	ci right 1	k: 4280000	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
POLDIP2   4280000 perm   7648 sec   (560 perm/sec)   p_kst 2.336449e-07   p_cons 1   p_joint 8.177570e-06

Joint ci ratio: 6.533305e-01	ci left: 5.682706e-06	ci right 1.134649e-05	k: 35	n:4290000
Cons ci ratio: 9.137525e-07	ci left: 9.999991e-01	ci right 1	k: 4290000	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
POLDIP2   4290000 perm   7682 sec   (558 perm/sec)   p_kst 2.331002e-07   p_cons 1   p_joint 8.158508e-06

Joint ci ratio: 6.533305e-01	ci left: 5.669491e-06	ci right 1.132010e-05	k: 35	n:4300000
Cons ci ratio: 9.116275e-07	ci left: 9.999991e-01	ci right 1	k: 4300000	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
POLDIP2   4300000 perm   7716 sec   (557 perm/sec)   p_kst 2.325581e-07   p_cons 1   p_joint 8.139535e-06

Joint ci ratio: 6.533305e-01	ci left: 5.656336e-06	ci right 1.129384e-05	k: 35	n:4310000
Cons ci ratio: 9.095123e-07	ci left: 9.999991e-01	ci right 1	k: 4310000	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
POLDIP2   4310000 perm   7751 sec   (556 perm/sec)   p_kst 2.320186e-07   p_cons 1   p_joint 8.120650e-06

Joint ci ratio: 6.533305e-01	ci left: 5.643243e-06	ci right 1.126770e-05	k: 35	n:4320000
Cons ci ratio: 9.074070e-07	ci left: 9.999991e-01	ci right 1	k: 4320000	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
POLDIP2   4320000 perm   7786 sec   (555 perm/sec)   p_kst 2.314815e-07   p_cons 1   p_joint 8.101852e-06

Joint ci ratio: 6.533305e-01	ci left: 5.630210e-06	ci right 1.124167e-05	k: 35	n:4330000
Cons ci ratio: 9.053114e-07	ci left: 9.999991e-01	ci right 1	k: 4330000	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
POLDIP2   4330000 perm   7822 sec   (554 perm/sec)   p_kst 2.309469e-07   p_cons 1   p_joint 8.083141e-06

Joint ci ratio: 6.533305e-01	ci left: 5.617237e-06	ci right 1.121577e-05	k: 35	n:4340000
Cons ci ratio: 9.032254e-07	ci left: 9.999992e-01	ci right 1	k: 4340000	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
POLDIP2   4340000 perm   7857 sec   (552 perm/sec)   p_kst 2.304147e-07   p_cons 1   p_joint 8.064516e-06

Joint ci ratio: 6.533306e-01	ci left: 5.604324e-06	ci right 1.118999e-05	k: 35	n:4350000
Cons ci ratio: 9.011490e-07	ci left: 9.999992e-01	ci right 1	k: 4350000	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
POLDIP2   4350000 perm   7892 sec   (551 perm/sec)   p_kst 2.298851e-07   p_cons 1   p_joint 8.045977e-06

Joint ci ratio: 6.444412e-01	ci left: 5.783024e-06	ci right 1.143099e-05	k: 36	n:4360000
Cons ci ratio: 8.990822e-07	ci left: 9.999992e-01	ci right 1	k: 4360000	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
POLDIP2   4360000 perm   7927 sec   (550 perm/sec)   p_kst 2.293578e-07   p_cons 1   p_joint 8.256881e-06

Joint ci ratio: 6.444412e-01	ci left: 5.769791e-06	ci right 1.140483e-05	k: 36	n:4370000
Cons ci ratio: 8.970248e-07	ci left: 9.999992e-01	ci right 1	k: 4370000	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
POLDIP2   4370000 perm   7962 sec   (549 perm/sec)   p_kst 2.288330e-07   p_cons 1   p_joint 8.237986e-06

Joint ci ratio: 6.444412e-01	ci left: 5.756618e-06	ci right 1.137879e-05	k: 36	n:4380000
Cons ci ratio: 8.949768e-07	ci left: 9.999992e-01	ci right 1	k: 4380000	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
POLDIP2   4380000 perm   7996 sec   (548 perm/sec)   p_kst 2.283105e-07   p_cons 1   p_joint 8.219178e-06

Joint ci ratio: 6.444412e-01	ci left: 5.743505e-06	ci right 1.135287e-05	k: 36	n:4390000
Cons ci ratio: 8.929381e-07	ci left: 9.999992e-01	ci right 1	k: 4390000	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
POLDIP2   4390000 perm   8031 sec   (547 perm/sec)   p_kst 2.277904e-07   p_cons 1   p_joint 8.200456e-06

Joint ci ratio: 6.359052e-01	ci left: 5.920783e-06	ci right 1.159081e-05	k: 37	n:4400000
Cons ci ratio: 8.909087e-07	ci left: 9.999992e-01	ci right 1	k: 4400000	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
POLDIP2   4400000 perm   8066 sec   (546 perm/sec)   p_kst 2.272727e-07   p_cons 1   p_joint 8.409091e-06

Joint ci ratio: 6.359052e-01	ci left: 5.907357e-06	ci right 1.156452e-05	k: 37	n:4410000
Cons ci ratio: 8.888885e-07	ci left: 9.999992e-01	ci right 1	k: 4410000	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
POLDIP2   4410000 perm   8101 sec   (544 perm/sec)   p_kst 2.267574e-07   p_cons 1   p_joint 8.390023e-06

Joint ci ratio: 6.359052e-01	ci left: 5.893992e-06	ci right 1.153836e-05	k: 37	n:4420000
Cons ci ratio: 8.868774e-07	ci left: 9.999992e-01	ci right 1	k: 4420000	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
POLDIP2   4420000 perm   8136 sec   (543 perm/sec)   p_kst 2.262443e-07   p_cons 1   p_joint 8.371041e-06

Joint ci ratio: 6.359052e-01	ci left: 5.880687e-06	ci right 1.151231e-05	k: 37	n:4430000
Cons ci ratio: 8.848754e-07	ci left: 9.999992e-01	ci right 1	k: 4430000	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
POLDIP2   4430000 perm   8171 sec   (542 perm/sec)   p_kst 2.257336e-07   p_cons 1   p_joint 8.352144e-06

Joint ci ratio: 6.359052e-01	ci left: 5.867442e-06	ci right 1.148638e-05	k: 37	n:4440000
Cons ci ratio: 8.828825e-07	ci left: 9.999992e-01	ci right 1	k: 4440000	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
POLDIP2   4440000 perm   8206 sec   (541 perm/sec)   p_kst 2.252252e-07   p_cons 1   p_joint 8.333333e-06

Joint ci ratio: 6.359052e-01	ci left: 5.854257e-06	ci right 1.146057e-05	k: 37	n:4450000
Cons ci ratio: 8.808985e-07	ci left: 9.999992e-01	ci right 1	k: 4450000	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
POLDIP2   4450000 perm   8241 sec   (540 perm/sec)   p_kst 2.247191e-07   p_cons 1   p_joint 8.314607e-06

Joint ci ratio: 6.359052e-01	ci left: 5.841131e-06	ci right 1.143488e-05	k: 37	n:4460000
Cons ci ratio: 8.789234e-07	ci left: 9.999992e-01	ci right 1	k: 4460000	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
POLDIP2   4460000 perm   8277 sec   (539 perm/sec)   p_kst 2.242152e-07   p_cons 1   p_joint 8.295964e-06

Joint ci ratio: 6.276996e-01	ci left: 6.015904e-06	ci right 1.166843e-05	k: 38	n:4470000
Cons ci ratio: 8.769571e-07	ci left: 9.999992e-01	ci right 1	k: 4470000	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
POLDIP2   4470000 perm   8312 sec   (538 perm/sec)   p_kst 2.237136e-07   p_cons 1   p_joint 8.501119e-06

Joint ci ratio: 6.276996e-01	ci left: 6.002476e-06	ci right 1.164239e-05	k: 38	n:4480000
Cons ci ratio: 8.749996e-07	ci left: 9.999992e-01	ci right 1	k: 4480000	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
POLDIP2   4480000 perm   8347 sec   (537 perm/sec)   p_kst 2.232143e-07   p_cons 1   p_joint 8.482143e-06

Joint ci ratio: 6.276996e-01	ci left: 5.989107e-06	ci right 1.161646e-05	k: 38	n:4490000
Cons ci ratio: 8.730508e-07	ci left: 9.999992e-01	ci right 1	k: 4490000	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
POLDIP2   4490000 perm   8383 sec   (536 perm/sec)   p_kst 2.227171e-07   p_cons 1   p_joint 8.463252e-06

Joint ci ratio: 6.276996e-01	ci left: 5.975798e-06	ci right 1.159064e-05	k: 38	n:4500000
Cons ci ratio: 8.711107e-07	ci left: 9.999992e-01	ci right 1	k: 4500000	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
POLDIP2   4500000 perm   8419 sec   (535 perm/sec)   p_kst 2.222222e-07   p_cons 1   p_joint 8.444444e-06

Joint ci ratio: 6.276996e-01	ci left: 5.962548e-06	ci right 1.156494e-05	k: 38	n:4510000
Cons ci ratio: 8.691792e-07	ci left: 9.999992e-01	ci right 1	k: 4510000	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
POLDIP2   4510000 perm   8454 sec   (533 perm/sec)   p_kst 2.217295e-07   p_cons 1   p_joint 8.425721e-06

Joint ci ratio: 6.276996e-01	ci left: 5.949357e-06	ci right 1.153936e-05	k: 38	n:4520000
Cons ci ratio: 8.672563e-07	ci left: 9.999992e-01	ci right 1	k: 4520000	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
POLDIP2   4520000 perm   8490 sec   (532 perm/sec)   p_kst 2.212389e-07   p_cons 1   p_joint 8.407080e-06

Joint ci ratio: 6.276996e-01	ci left: 5.936223e-06	ci right 1.151388e-05	k: 38	n:4530000
Cons ci ratio: 8.653418e-07	ci left: 9.999992e-01	ci right 1	k: 4530000	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
POLDIP2   4530000 perm   8525 sec   (531 perm/sec)   p_kst 2.207506e-07   p_cons 1   p_joint 8.388521e-06

Joint ci ratio: 6.276996e-01	ci left: 5.923148e-06	ci right 1.148852e-05	k: 38	n:4540000
Cons ci ratio: 8.634357e-07	ci left: 9.999992e-01	ci right 1	k: 4540000	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
POLDIP2   4540000 perm   8561 sec   (530 perm/sec)   p_kst 2.202643e-07   p_cons 1   p_joint 8.370044e-06

Joint ci ratio: 6.276996e-01	ci left: 5.910130e-06	ci right 1.146327e-05	k: 38	n:4550000
Cons ci ratio: 8.615381e-07	ci left: 9.999992e-01	ci right 1	k: 4550000	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
POLDIP2   4550000 perm   8597 sec   (529 perm/sec)   p_kst 2.197802e-07   p_cons 1   p_joint 8.351648e-06

Joint ci ratio: 6.276996e-01	ci left: 5.897169e-06	ci right 1.143813e-05	k: 38	n:4560000
Cons ci ratio: 8.596487e-07	ci left: 9.999992e-01	ci right 1	k: 4560000	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
POLDIP2   4560000 perm   8634 sec   (528 perm/sec)   p_kst 2.192982e-07   p_cons 1   p_joint 8.333333e-06

Joint ci ratio: 6.198036e-01	ci left: 6.068456e-06	ci right 1.166613e-05	k: 39	n:4570000
Cons ci ratio: 8.577677e-07	ci left: 9.999992e-01	ci right 1	k: 4570000	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
POLDIP2   4570000 perm   8670 sec   (527 perm/sec)   p_kst 2.188184e-07   p_cons 1   p_joint 8.533917e-06

Joint ci ratio: 6.198036e-01	ci left: 6.055206e-06	ci right 1.164066e-05	k: 39	n:4580000
Cons ci ratio: 8.558948e-07	ci left: 9.999992e-01	ci right 1	k: 4580000	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
POLDIP2   4580000 perm   8706 sec   (526 perm/sec)   p_kst 2.183406e-07   p_cons 1   p_joint 8.515284e-06

Joint ci ratio: 6.198037e-01	ci left: 6.042014e-06	ci right 1.161529e-05	k: 39	n:4590000
Cons ci ratio: 8.540301e-07	ci left: 9.999992e-01	ci right 1	k: 4590000	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
POLDIP2   4590000 perm   8743 sec   (525 perm/sec)   p_kst 2.178649e-07   p_cons 1   p_joint 8.496732e-06

Joint ci ratio: 6.198037e-01	ci left: 6.028879e-06	ci right 1.159004e-05	k: 39	n:4600000
Cons ci ratio: 8.521735e-07	ci left: 9.999992e-01	ci right 1	k: 4600000	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
POLDIP2   4600000 perm   8779 sec   (524 perm/sec)   p_kst 2.173913e-07   p_cons 1   p_joint 8.478261e-06

Joint ci ratio: 6.198037e-01	ci left: 6.015801e-06	ci right 1.156490e-05	k: 39	n:4610000
Cons ci ratio: 8.503250e-07	ci left: 9.999992e-01	ci right 1	k: 4610000	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
POLDIP2   4610000 perm   8815 sec   (523 perm/sec)   p_kst 2.169197e-07   p_cons 1   p_joint 8.459870e-06

Joint ci ratio: 6.121984e-01	ci left: 6.185415e-06	ci right 1.178973e-05	k: 40	n:4620000
Cons ci ratio: 8.484845e-07	ci left: 9.999992e-01	ci right 1	k: 4620000	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
POLDIP2   4620000 perm   8851 sec   (522 perm/sec)   p_kst 2.164502e-07   p_cons 1   p_joint 8.658009e-06

Joint ci ratio: 6.121984e-01	ci left: 6.172056e-06	ci right 1.176427e-05	k: 40	n:4630000
Cons ci ratio: 8.466519e-07	ci left: 9.999992e-01	ci right 1	k: 4630000	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
POLDIP2   4630000 perm   8888 sec   (521 perm/sec)   p_kst 2.159827e-07   p_cons 1   p_joint 8.639309e-06

Joint ci ratio: 6.048663e-01	ci left: 6.341022e-06	ci right 1.198729e-05	k: 41	n:4640000
Cons ci ratio: 8.448272e-07	ci left: 9.999992e-01	ci right 1	k: 4640000	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
POLDIP2   4640000 perm   8924 sec   (520 perm/sec)   p_kst 2.155172e-07   p_cons 1   p_joint 8.836207e-06

Joint ci ratio: 6.048663e-01	ci left: 6.327385e-06	ci right 1.196151e-05	k: 41	n:4650000
Cons ci ratio: 8.430104e-07	ci left: 9.999992e-01	ci right 1	k: 4650000	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
POLDIP2   4650000 perm   8960 sec   (519 perm/sec)   p_kst 2.150538e-07   p_cons 1   p_joint 8.817204e-06

Joint ci ratio: 6.048663e-01	ci left: 6.313807e-06	ci right 1.193585e-05	k: 41	n:4660000
Cons ci ratio: 8.412014e-07	ci left: 9.999992e-01	ci right 1	k: 4660000	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
POLDIP2   4660000 perm   8998 sec   (518 perm/sec)   p_kst 2.145923e-07   p_cons 1   p_joint 8.798283e-06

Joint ci ratio: 6.048663e-01	ci left: 6.300287e-06	ci right 1.191029e-05	k: 41	n:4670000
Cons ci ratio: 8.394001e-07	ci left: 9.999992e-01	ci right 1	k: 4670000	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
POLDIP2   4670000 perm   9035 sec   (517 perm/sec)   p_kst 2.141328e-07   p_cons 1   p_joint 8.779443e-06

Joint ci ratio: 6.048664e-01	ci left: 6.286825e-06	ci right 1.188484e-05	k: 41	n:4680000
Cons ci ratio: 8.376065e-07	ci left: 9.999992e-01	ci right 1	k: 4680000	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
POLDIP2   4680000 perm   9073 sec   (516 perm/sec)   p_kst 2.136752e-07   p_cons 1   p_joint 8.760684e-06

Joint ci ratio: 6.048664e-01	ci left: 6.273420e-06	ci right 1.185950e-05	k: 41	n:4690000
Cons ci ratio: 8.358205e-07	ci left: 9.999992e-01	ci right 1	k: 4690000	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
POLDIP2   4690000 perm   9111 sec   (515 perm/sec)   p_kst 2.132196e-07   p_cons 1   p_joint 8.742004e-06

Joint ci ratio: 6.048664e-01	ci left: 6.260073e-06	ci right 1.183426e-05	k: 41	n:4700000
Cons ci ratio: 8.340422e-07	ci left: 9.999992e-01	ci right 1	k: 4700000	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
POLDIP2   4700000 perm   9148 sec   (514 perm/sec)   p_kst 2.127660e-07   p_cons 1   p_joint 8.723404e-06

Joint ci ratio: 6.048664e-01	ci left: 6.246782e-06	ci right 1.180914e-05	k: 41	n:4710000
Cons ci ratio: 8.322714e-07	ci left: 9.999992e-01	ci right 1	k: 4710000	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
POLDIP2   4710000 perm   9186 sec   (513 perm/sec)   p_kst 2.123142e-07   p_cons 1   p_joint 8.704883e-06

Joint ci ratio: 6.048664e-01	ci left: 6.233547e-06	ci right 1.178412e-05	k: 41	n:4720000
Cons ci ratio: 8.305081e-07	ci left: 9.999992e-01	ci right 1	k: 4720000	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
POLDIP2   4720000 perm   9223 sec   (512 perm/sec)   p_kst 2.118644e-07   p_cons 1   p_joint 8.686441e-06

Joint ci ratio: 6.048664e-01	ci left: 6.220368e-06	ci right 1.175921e-05	k: 41	n:4730000
Cons ci ratio: 8.287523e-07	ci left: 9.999992e-01	ci right 1	k: 4730000	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
POLDIP2   4730000 perm   9261 sec   (511 perm/sec)   p_kst 2.114165e-07   p_cons 1   p_joint 8.668076e-06

Joint ci ratio: 6.048664e-01	ci left: 6.207245e-06	ci right 1.173440e-05	k: 41	n:4740000
Cons ci ratio: 8.270039e-07	ci left: 9.999992e-01	ci right 1	k: 4740000	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
POLDIP2   4740000 perm   9299 sec   (510 perm/sec)   p_kst 2.109705e-07   p_cons 1   p_joint 8.649789e-06

Joint ci ratio: 6.048664e-01	ci left: 6.194177e-06	ci right 1.170969e-05	k: 41	n:4750000
Cons ci ratio: 8.252628e-07	ci left: 9.999992e-01	ci right 1	k: 4750000	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
POLDIP2   4750000 perm   9337 sec   (509 perm/sec)   p_kst 2.105263e-07   p_cons 1   p_joint 8.631579e-06

Joint ci ratio: 6.048664e-01	ci left: 6.181164e-06	ci right 1.168509e-05	k: 41	n:4760000
Cons ci ratio: 8.235291e-07	ci left: 9.999992e-01	ci right 1	k: 4760000	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
POLDIP2   4760000 perm   9374 sec   (508 perm/sec)   p_kst 2.100840e-07   p_cons 1   p_joint 8.613445e-06

Joint ci ratio: 6.048664e-01	ci left: 6.168206e-06	ci right 1.166060e-05	k: 41	n:4770000
Cons ci ratio: 8.218026e-07	ci left: 9.999992e-01	ci right 1	k: 4770000	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
POLDIP2   4770000 perm   9412 sec   (507 perm/sec)   p_kst 2.096436e-07   p_cons 1   p_joint 8.595388e-06

Joint ci ratio: 6.048664e-01	ci left: 6.155301e-06	ci right 1.163620e-05	k: 41	n:4780000
Cons ci ratio: 8.200833e-07	ci left: 9.999992e-01	ci right 1	k: 4780000	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
POLDIP2   4780000 perm   9449 sec   (506 perm/sec)   p_kst 2.092050e-07   p_cons 1   p_joint 8.577406e-06

Joint ci ratio: 6.048664e-01	ci left: 6.142451e-06	ci right 1.161191e-05	k: 41	n:4790000
Cons ci ratio: 8.183713e-07	ci left: 9.999992e-01	ci right 1	k: 4790000	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
POLDIP2   4790000 perm   9487 sec   (505 perm/sec)   p_kst 2.087683e-07   p_cons 1   p_joint 8.559499e-06

Joint ci ratio: 6.048664e-01	ci left: 6.129654e-06	ci right 1.158772e-05	k: 41	n:4800000
Cons ci ratio: 8.166663e-07	ci left: 9.999992e-01	ci right 1	k: 4800000	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
POLDIP2   4800000 perm   9525 sec   (504 perm/sec)   p_kst 2.083333e-07   p_cons 1   p_joint 8.541667e-06

Joint ci ratio: 6.048664e-01	ci left: 6.116911e-06	ci right 1.156363e-05	k: 41	n:4810000
Cons ci ratio: 8.149685e-07	ci left: 9.999992e-01	ci right 1	k: 4810000	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
POLDIP2   4810000 perm   9564 sec   (503 perm/sec)   p_kst 2.079002e-07   p_cons 1   p_joint 8.523909e-06

Joint ci ratio: 6.048664e-01	ci left: 6.104220e-06	ci right 1.153964e-05	k: 41	n:4820000
Cons ci ratio: 8.132777e-07	ci left: 9.999992e-01	ci right 1	k: 4820000	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
POLDIP2   4820000 perm   9604 sec   (502 perm/sec)   p_kst 2.074689e-07   p_cons 1   p_joint 8.506224e-06

Joint ci ratio: 6.198038e-01	ci left: 5.741789e-06	ci right 1.103814e-05	k: 39	n:4830000
Cons ci ratio: 8.115939e-07	ci left: 9.999992e-01	ci right 1	k: 4830000	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
POLDIP2   4830000 perm   9643 sec   (501 perm/sec)   p_kst 2.070393e-07   p_cons 1   p_joint 8.074534e-06

Joint ci ratio: 6.198038e-01	ci left: 5.729926e-06	ci right 1.101533e-05	k: 39	n:4840000
Cons ci ratio: 8.099170e-07	ci left: 9.999992e-01	ci right 1	k: 4840000	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
POLDIP2   4840000 perm   9682 sec   (500 perm/sec)   p_kst 2.066116e-07   p_cons 1   p_joint 8.057851e-06

Joint ci ratio: 6.198038e-01	ci left: 5.718112e-06	ci right 1.099262e-05	k: 39	n:4850000
Cons ci ratio: 8.082471e-07	ci left: 9.999992e-01	ci right 1	k: 4850000	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
POLDIP2   4850000 perm   9720 sec   (499 perm/sec)   p_kst 2.061856e-07   p_cons 1   p_joint 8.041237e-06

Joint ci ratio: 6.198038e-01	ci left: 5.706346e-06	ci right 1.097000e-05	k: 39	n:4860000
Cons ci ratio: 8.065840e-07	ci left: 9.999992e-01	ci right 1	k: 4860000	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
POLDIP2   4860000 perm   9758 sec   (498 perm/sec)   p_kst 2.057613e-07   p_cons 1   p_joint 8.024691e-06

Joint ci ratio: 6.198038e-01	ci left: 5.694629e-06	ci right 1.094748e-05	k: 39	n:4870000
Cons ci ratio: 8.049278e-07	ci left: 9.999992e-01	ci right 1	k: 4870000	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
POLDIP2   4870000 perm   9798 sec   (497 perm/sec)   p_kst 2.053388e-07   p_cons 1   p_joint 8.008214e-06

Joint ci ratio: 6.198038e-01	ci left: 5.682959e-06	ci right 1.092504e-05	k: 39	n:4880000
Cons ci ratio: 8.032784e-07	ci left: 9.999992e-01	ci right 1	k: 4880000	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
POLDIP2   4880000 perm   9837 sec   (496 perm/sec)   p_kst 2.049180e-07   p_cons 1   p_joint 7.991803e-06

Joint ci ratio: 6.198038e-01	ci left: 5.671338e-06	ci right 1.090270e-05	k: 39	n:4890000
Cons ci ratio: 8.016357e-07	ci left: 9.999992e-01	ci right 1	k: 4890000	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
POLDIP2   4890000 perm   9877 sec   (495 perm/sec)   p_kst 2.044990e-07   p_cons 1   p_joint 7.975460e-06

Joint ci ratio: 6.198038e-01	ci left: 5.659764e-06	ci right 1.088045e-05	k: 39	n:4900000
Cons ci ratio: 7.999997e-07	ci left: 9.999992e-01	ci right 1	k: 4900000	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
POLDIP2   4900000 perm   9916 sec   (494 perm/sec)   p_kst 2.040816e-07   p_cons 1   p_joint 7.959184e-06

Joint ci ratio: 6.198038e-01	ci left: 5.648237e-06	ci right 1.085829e-05	k: 39	n:4910000
Cons ci ratio: 7.983703e-07	ci left: 9.999992e-01	ci right 1	k: 4910000	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
POLDIP2   4910000 perm   9955 sec   (493 perm/sec)   p_kst 2.036660e-07   p_cons 1   p_joint 7.942974e-06

Joint ci ratio: 6.198038e-01	ci left: 5.636756e-06	ci right 1.083622e-05	k: 39	n:4920000
Cons ci ratio: 7.967476e-07	ci left: 9.999993e-01	ci right 1	k: 4920000	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
POLDIP2   4920000 perm   9995 sec   (492 perm/sec)   p_kst 2.032520e-07   p_cons 1   p_joint 7.926829e-06

Joint ci ratio: 6.198038e-01	ci left: 5.625323e-06	ci right 1.081424e-05	k: 39	n:4930000
Cons ci ratio: 7.951315e-07	ci left: 9.999993e-01	ci right 1	k: 4930000	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
POLDIP2   4930000 perm   10035 sec   (491 perm/sec)   p_kst 2.028398e-07   p_cons 1   p_joint 7.910751e-06

Joint ci ratio: 6.198038e-01	ci left: 5.613935e-06	ci right 1.079235e-05	k: 39	n:4940000
Cons ci ratio: 7.935219e-07	ci left: 9.999993e-01	ci right 1	k: 4940000	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
POLDIP2   4940000 perm   10075 sec   (490 perm/sec)   p_kst 2.024291e-07   p_cons 1   p_joint 7.894737e-06

Joint ci ratio: 6.198039e-01	ci left: 5.602594e-06	ci right 1.077055e-05	k: 39	n:4950000
Cons ci ratio: 7.919189e-07	ci left: 9.999993e-01	ci right 1	k: 4950000	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
POLDIP2   4950000 perm   10114 sec   (489 perm/sec)   p_kst 2.020202e-07   p_cons 1   p_joint 7.878788e-06

Joint ci ratio: 6.198039e-01	ci left: 5.591299e-06	ci right 1.074883e-05	k: 39	n:4960000
Cons ci ratio: 7.903223e-07	ci left: 9.999993e-01	ci right 1	k: 4960000	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
POLDIP2   4960000 perm   10154 sec   (488 perm/sec)   p_kst 2.016129e-07   p_cons 1   p_joint 7.862903e-06

Joint ci ratio: 6.198039e-01	ci left: 5.580049e-06	ci right 1.072720e-05	k: 39	n:4970000
Cons ci ratio: 7.887321e-07	ci left: 9.999993e-01	ci right 1	k: 4970000	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
POLDIP2   4970000 perm   10195 sec   (488 perm/sec)   p_kst 2.012072e-07   p_cons 1   p_joint 7.847082e-06

Joint ci ratio: 6.198039e-01	ci left: 5.568844e-06	ci right 1.070566e-05	k: 39	n:4980000
Cons ci ratio: 7.871483e-07	ci left: 9.999993e-01	ci right 1	k: 4980000	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
POLDIP2   4980000 perm   10235 sec   (487 perm/sec)   p_kst 2.008032e-07   p_cons 1   p_joint 7.831325e-06

Joint ci ratio: 6.198039e-01	ci left: 5.557684e-06	ci right 1.068421e-05	k: 39	n:4990000
Cons ci ratio: 7.855708e-07	ci left: 9.999993e-01	ci right 1	k: 4990000	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
POLDIP2   4990000 perm   10274 sec   (486 perm/sec)   p_kst 2.004008e-07   p_cons 1   p_joint 7.815631e-06

Joint ci ratio: 5.717880e-01	ci left: 6.735564e-06	ci right 1.227149e-05	k: 46	n:5000000
Cons ci ratio: 7.839997e-07	ci left: 9.999993e-01	ci right 1	k: 5000000	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
POLDIP2   5000000 perm   10314 sec   (485 perm/sec)   p_kst 2.000000e-07   p_cons 1   p_joint 9.200000e-06

Outputting figure to mutsig2_images.part000000000134/POLDIP2.7_1150_5000000_2e-07_1_9.2e-06.png
                gene_name: POLDIP2
               theta_stop: 2.8 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 1 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1 
                  p_joint: 9.20e-06 
     ci_joint_bounds_left: 6.74e-06 
    ci_joint_bounds_right: 1.23e-05 

Current progress: 33 percent done.
POLR1B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.056430e-03	ci left: 9.873032e-01	ci right 9.914042e-01	k: 9895	n:10000
Cons ci ratio: 4.299881e-02	ci left: 4.440068e-01	ci right 4.636202e-01	k: 4538	n:10000
KS ci ratio: 8.525785e-02	ci left: 1.670085e-01	ci right 1.819816e-01	k: 1744	n:10000
POLR1B   10000 perm   2 sec   (5675 perm/sec)   p_kst 1.744000e-01   p_cons 4.538000e-01   p_joint 9.895000e-01

Outputting figure to mutsig2_images.part000000000134/POLR1B.2_3468_10000_0.1744_0.4538_0.9895.png
                gene_name: POLR1B
               theta_stop: 0.085 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 67 percent done.
POM121
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.013616e-02	ci left: 2.891445e-01	ci right 3.071732e-01	k: 2981	n:10000
Cons ci ratio: 8.612609e-02	ci left: 1.641585e-01	ci right 1.790334e-01	k: 1715	n:10000
KS ci ratio: 3.473567e-02	ci left: 5.503049e-01	ci right 5.698601e-01	k: 5601	n:10000
POM121   10000 perm   2 sec   (5908 perm/sec)   p_kst 5.601000e-01   p_cons 1.715000e-01   p_joint 2.981000e-01

Outputting figure to mutsig2_images.part000000000134/POM121.2_3003_10000_0.5601_0.1715_0.2981.png
                gene_name: POM121
               theta_stop: 0.086 
                    nperm: 10000 
                     p_ks: 0.56 
        ci_ks_bounds_left: 0.55 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.31 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000134
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 134 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1702>
Subject: Job 8704310: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1702>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000135> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 20:53:16 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000135.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000135.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 135  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000135.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   4777.25 sec.
    Max Memory :      6098 MB
    Max Swap   :      8489 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
135
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 135
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 135: processing genes 12123 - 12213
Calculating significance of each gene.
Using projection method.
12123	POMGNT1	1
12124	POMP	1
12125	POMT1	1
12126	POMT2	1.710868e-01
12127	POMZP3	1
12128	PON1	1
12129	PON2	1
12130	PON3	1
12131	POP1	1
12132	POP4	1
In gene POP5 the following bins exceed PROBCAP:
    THCA-EL-A3T6-TP	categ 6	N = 512     n = 1	mu =   6.83e-08
12133	POP5	1.666460e-02
12134	POP7	1
12135	POPDC2	1
12136	POPDC3	1
12137	POR	1
12138	PORCN	1
12139	POSTN	1.206716e-01
12140	POT1	1
12141	POTEA	1
12142	POTEC	8.390506e-02
12143	POTEE	1.035529e-02
12144	POTEF	8.129716e-02
12145	POTEG	9.625688e-04
12146	POTEH	8.559425e-03
12147	POTEM	1
12148	POU1F1	1
12149	POU2AF1	1.229753e-01
12150	POU2F1	7.740864e-02
12151	POU2F2	1.106087e-01
12152	POU2F3	1
12153	POU3F1	1
12154	POU3F2	1
12155	POU3F3	1
12156	POU3F4	1
12157	POU4F1	1
In gene POU4F2 the following bins exceed PROBCAP:
    THCA-H2-A26U-TP	categ 6	N = 1097    n = 1	mu =   9.95e-08
12158	POU4F2	7.635958e-03
12159	POU4F3	1.107499e-01
12160	POU5F1	1
12161	POU5F1B	1
12162	POU5F2	1
12163	POU6F1	1
12164	POU6F2	1
12165	PPA1	1
12166	PPA2	1
12167	PPAN	1
12168	PPAN-P2RY11	1.657129e-01
12169	PPAP2A	1
12170	PPAP2B	1
12171	PPAP2C	1
12172	PPAPDC1A	1
12173	PPAPDC1B	1
12174	PPAPDC2	1
12175	PPAPDC3	1
12176	PPARA	1.519109e-01
12177	PPARD	1
12178	PPARG	1
12179	PPARGC1A	1.764919e-01
12180	PPARGC1B	1
12181	PPAT	1.046858e-01
12182	PPBP	1
12183	PPCDC	1
12184	PPCS	1
12185	PPDPF	1
12186	PPEF1	3.143107e-02
12187	PPEF2	1
12188	PPFIA1	4.377009e-01
12189	PPFIA2	1
12190	PPFIA3	1
12191	PPFIA4	1.746861e-01
12192	PPFIBP1	1
12193	PPFIBP2	1
12194	PPHLN1	1
12195	PPIA	1
12196	PPIAL4E	1
12197	PPIAL4G	1
12198	PPIB	1
12199	PPIC	1
12200	PPID	1
12201	PPIE	1
12202	PPIF	1
12203	PPIG	2.810761e-01
12204	PPIH	1
12205	PPIL1	1
12206	PPIL2	1
12207	PPIL3	1
12208	PPIL4	1
12209	PPIL5	1
12210	PPIL6	1.853258e-03
12211	PPIP5K1	1
12212	PPIP5K2	1
12213	PPL	2.536569e-01
Done

Running MutSig 2:
Scatter job 135: processing genes 12123 - 12213
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
POTEG
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.519279e-02	ci left: 3.259469e-01	ci right 3.445492e-01	k: 3352	n:10000
Cons ci ratio: 5.497778e-03	ci left: 9.779161e-01	ci right 9.833989e-01	k: 9808	n:10000
KS ci ratio: 1.377594e-01	ci left: 6.971834e-02	ci right 8.013090e-02	k: 748	n:10000
POTEG   10000 perm   2 sec   (5927 perm/sec)   p_kst 7.480000e-02   p_cons 9.808000e-01   p_joint 3.352000e-01

Joint ci ratio: 3.395555e-02	ci left: 3.930509e-01	ci right 4.066782e-01	k: 7997	n:20000
Cons ci ratio: 3.954246e-03	ci left: 9.780682e-01	ci right 9.819905e-01	k: 19602	n:20000
KS ci ratio: 9.844654e-02	ci left: 6.982288e-02	ci right 7.710171e-02	k: 1468	n:20000
POTEG   20000 perm   6 sec   (3623 perm/sec)   p_kst 7.340000e-02   p_cons 9.801000e-01   p_joint 3.998500e-01

Outputting figure to mutsig2_images.part000000000135/POTEG.3_1567_20000_0.0734_0.9801_0.39985.png
                gene_name: POTEG
               theta_stop: 0.098 
                    nperm: 20000 
                     p_ks: 0.073 
        ci_ks_bounds_left: 0.070 
       ci_ks_bounds_right: 0.077 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.40 
     ci_joint_bounds_left: 0.39 
    ci_joint_bounds_right: 0.41 

Current progress: 17 percent done.
POTEE
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.481028e+00	ci left: 2.202202e-04	ci right 1.305486e-03	k: 6	n:10000
Cons ci ratio: 1.927568e-02	ci left: 7.974007e-01	ci right 8.130211e-01	k: 8053	n:10000
KS ci ratio: 1.481028e+00	ci left: 2.202202e-04	ci right 1.305486e-03	k: 6	n:10000
POTEE   10000 perm   2 sec   (5907 perm/sec)   p_kst 6.000000e-04   p_cons 8.053000e-01   p_joint 6.000000e-04

Joint ci ratio: 9.795835e-01	ci left: 4.198281e-04	ci right 1.236710e-03	k: 15	n:20000
Cons ci ratio: 1.342943e-02	ci left: 8.043921e-01	ci right 8.153177e-01	k: 16198	n:20000
KS ci ratio: 9.795835e-01	ci left: 4.198281e-04	ci right 1.236710e-03	k: 15	n:20000
POTEE   20000 perm   4 sec   (5319 perm/sec)   p_kst 7.500000e-04   p_cons 8.099000e-01   p_joint 7.500000e-04

Joint ci ratio: 8.354264e-01	ci left: 4.333616e-04	ci right 1.069826e-03	k: 21	n:30000
Cons ci ratio: 1.012534e-02	ci left: 8.289663e-01	ci right 8.374358e-01	k: 24997	n:30000
KS ci ratio: 8.354264e-01	ci left: 4.333616e-04	ci right 1.069826e-03	k: 21	n:30000
POTEE   30000 perm   6 sec   (5083 perm/sec)   p_kst 7.000000e-04   p_cons 8.332333e-01   p_joint 7.000000e-04

Joint ci ratio: 7.405418e-01	ci left: 4.448749e-04	ci right 9.819388e-04	k: 27	n:40000
Cons ci ratio: 8.816281e-03	ci left: 8.280222e-01	ci right 8.353795e-01	k: 33269	n:40000
KS ci ratio: 7.405418e-01	ci left: 4.448749e-04	ci right 9.819388e-04	k: 27	n:40000
POTEE   40000 perm   8 sec   (4946 perm/sec)   p_kst 6.750000e-04   p_cons 8.317250e-01   p_joint 6.750000e-04

Joint ci ratio: 6.274512e-01	ci left: 5.378756e-04	ci right 1.043012e-03	k: 38	n:50000
Cons ci ratio: 7.820189e-03	ci left: 8.307496e-01	ci right 8.372916e-01	k: 41702	n:50000
KS ci ratio: 6.274512e-01	ci left: 5.378756e-04	ci right 1.043012e-03	k: 38	n:50000
POTEE   50000 perm   10 sec   (4832 perm/sec)   p_kst 7.600000e-04   p_cons 8.340400e-01   p_joint 7.600000e-04

Joint ci ratio: 5.841351e-01	ci left: 5.328901e-04	ci right 9.843421e-04	k: 44	n:60000
Cons ci ratio: 7.114464e-03	ci left: 8.319887e-01	ci right 8.379455e-01	k: 50099	n:60000
KS ci ratio: 5.841351e-01	ci left: 5.328901e-04	ci right 9.843421e-04	k: 44	n:60000
POTEE   60000 perm   13 sec   (4721 perm/sec)   p_kst 7.333333e-04   p_cons 8.349833e-01   p_joint 7.333333e-04

Joint ci ratio: 5.236187e-01	ci left: 5.919607e-04	ci right 1.022594e-03	k: 55	n:70000
Cons ci ratio: 6.577421e-03	ci left: 8.326032e-01	ci right 8.381118e-01	k: 58476	n:70000
KS ci ratio: 5.236187e-01	ci left: 5.919607e-04	ci right 1.022594e-03	k: 55	n:70000
POTEE   70000 perm   15 sec   (4622 perm/sec)   p_kst 7.857143e-04   p_cons 8.353714e-01   p_joint 7.857143e-04

Joint ci ratio: 4.898009e-01	ci left: 6.051880e-04	ci right 1.007444e-03	k: 63	n:80000
Cons ci ratio: 6.145533e-03	ci left: 8.331013e-01	ci right 8.382493e-01	k: 66855	n:80000
KS ci ratio: 4.898009e-01	ci left: 6.051880e-04	ci right 1.007444e-03	k: 63	n:80000
POTEE   80000 perm   18 sec   (4532 perm/sec)   p_kst 7.875000e-04   p_cons 8.356875e-01   p_joint 7.875000e-04

Joint ci ratio: 4.751876e-01	ci left: 5.769793e-04	ci right 9.453231e-04	k: 67	n:90000
Cons ci ratio: 5.804806e-03	ci left: 8.327375e-01	ci right 8.375965e-01	k: 75166	n:90000
KS ci ratio: 4.751876e-01	ci left: 5.769793e-04	ci right 9.453231e-04	k: 67	n:90000
POTEE   90000 perm   20 sec   (4453 perm/sec)   p_kst 7.444444e-04   p_cons 8.351778e-01   p_joint 7.444444e-04

Joint ci ratio: 4.494817e-01	ci left: 5.899669e-04	ci right 9.400421e-04	k: 75	n:100000
Cons ci ratio: 5.505873e-03	ci left: 8.329160e-01	ci right 8.375245e-01	k: 83523	n:100000
KS ci ratio: 4.494817e-01	ci left: 5.899669e-04	ci right 9.400421e-04	k: 75	n:100000
POTEE   100000 perm   23 sec   (4372 perm/sec)   p_kst 7.500000e-04   p_cons 8.352300e-01   p_joint 7.500000e-04

Joint ci ratio: 4.225373e-01	ci left: 6.172723e-04	ci right 9.554019e-04	k: 85	n:110000
Cons ci ratio: 5.251078e-03	ci left: 8.329485e-01	ci right 8.373429e-01	k: 91867	n:110000
KS ci ratio: 4.225373e-01	ci left: 6.172723e-04	ci right 9.554019e-04	k: 85	n:110000
POTEE   110000 perm   26 sec   (4298 perm/sec)   p_kst 7.727273e-04   p_cons 8.351545e-01   p_joint 7.727273e-04

Joint ci ratio: 4.107701e-01	ci left: 6.031304e-04	ci right 9.217981e-04	k: 90	n:120000
Cons ci ratio: 5.471294e-03	ci left: 8.082961e-01	ci right 8.127389e-01	k: 97263	n:120000
KS ci ratio: 4.107701e-01	ci left: 6.031304e-04	ci right 9.217981e-04	k: 90	n:120000
POTEE   120000 perm   28 sec   (4216 perm/sec)   p_kst 7.500000e-04   p_cons 8.105250e-01   p_joint 7.500000e-04

Joint ci ratio: 3.823968e-01	ci left: 6.537033e-04	ci right 9.692518e-04	k: 104	n:130000
Cons ci ratio: 5.259050e-03	ci left: 8.082430e-01	ci right 8.125124e-01	k: 105350	n:130000
KS ci ratio: 3.823968e-01	ci left: 6.537033e-04	ci right 9.692518e-04	k: 104	n:130000
POTEE   130000 perm   31 sec   (4143 perm/sec)   p_kst 8.000000e-04   p_cons 8.103846e-01   p_joint 8.000000e-04

Joint ci ratio: 3.669908e-01	ci left: 6.652448e-04	ci right 9.703291e-04	k: 113	n:140000
Cons ci ratio: 5.072557e-03	ci left: 8.080283e-01	ci right 8.121446e-01	k: 113413	n:140000
KS ci ratio: 3.669908e-01	ci left: 6.652448e-04	ci right 9.703291e-04	k: 113	n:140000
POTEE   140000 perm   34 sec   (4074 perm/sec)   p_kst 8.071429e-04   p_cons 8.100929e-01   p_joint 8.071429e-04

Joint ci ratio: 3.533084e-01	ci left: 6.754685e-04	ci right 9.710445e-04	k: 122	n:150000
Cons ci ratio: 4.901183e-03	ci left: 8.080589e-01	ci right 8.120357e-01	k: 121508	n:150000
KS ci ratio: 3.533084e-01	ci left: 6.754685e-04	ci right 9.710445e-04	k: 122	n:150000
POTEE   150000 perm   37 sec   (4009 perm/sec)   p_kst 8.133333e-04   p_cons 8.100533e-01   p_joint 8.133333e-04

Joint ci ratio: 3.397647e-01	ci left: 6.903150e-04	ci right 9.782697e-04	k: 132	n:160000
Cons ci ratio: 4.746083e-03	ci left: 8.080878e-01	ci right 8.119384e-01	k: 129603	n:160000
KS ci ratio: 3.397647e-01	ci left: 6.903150e-04	ci right 9.782697e-04	k: 132	n:160000
POTEE   160000 perm   41 sec   (3948 perm/sec)   p_kst 8.250000e-04   p_cons 8.100188e-01   p_joint 8.250000e-04

Joint ci ratio: 3.242812e-01	ci left: 7.198097e-04	ci right 1.003541e-03	k: 145	n:170000
Cons ci ratio: 4.602104e-03	ci left: 8.082982e-01	ci right 8.120324e-01	k: 137729	n:170000
KS ci ratio: 3.242812e-01	ci left: 7.198097e-04	ci right 1.003541e-03	k: 145	n:170000
POTEE   170000 perm   44 sec   (3889 perm/sec)   p_kst 8.529412e-04   p_cons 8.101706e-01   p_joint 8.529412e-04

Joint ci ratio: 3.147255e-01	ci left: 7.258120e-04	ci right 1.001784e-03	k: 154	n:180000
Cons ci ratio: 4.469185e-03	ci left: 8.085758e-01	ci right 8.122031e-01	k: 145871	n:180000
KS ci ratio: 3.147255e-01	ci left: 7.258120e-04	ci right 1.001784e-03	k: 154	n:180000
POTEE   180000 perm   47 sec   (3831 perm/sec)   p_kst 8.555556e-04   p_cons 8.103944e-01   p_joint 8.555556e-04

Joint ci ratio: 3.005150e-01	ci left: 7.604704e-04	ci right 1.034075e-03	k: 169	n:190000
Cons ci ratio: 4.349981e-03	ci left: 8.086248e-01	ci right 8.121552e-01	k: 153975	n:190000
KS ci ratio: 3.005150e-01	ci left: 7.604704e-04	ci right 1.034075e-03	k: 169	n:190000
POTEE   190000 perm   50 sec   (3776 perm/sec)   p_kst 8.894737e-04   p_cons 8.103947e-01   p_joint 8.894737e-04

Joint ci ratio: 2.904368e-01	ci left: 7.780021e-04	ci right 1.046803e-03	k: 181	n:200000
Cons ci ratio: 4.242454e-03	ci left: 8.084794e-01	ci right 8.119216e-01	k: 162041	n:200000
KS ci ratio: 2.904368e-01	ci left: 7.780021e-04	ci right 1.046803e-03	k: 181	n:200000
POTEE   200000 perm   54 sec   (3722 perm/sec)   p_kst 9.050000e-04   p_cons 8.102050e-01   p_joint 9.050000e-04

Joint ci ratio: 2.813089e-01	ci left: 7.940024e-04	ci right 1.058182e-03	k: 193	n:210000
Cons ci ratio: 4.140855e-03	ci left: 8.084731e-01	ci right 8.118326e-01	k: 170133	n:210000
KS ci ratio: 2.813089e-01	ci left: 7.940024e-04	ci right 1.058182e-03	k: 193	n:210000
POTEE   210000 perm   57 sec   (3664 perm/sec)   p_kst 9.190476e-04   p_cons 8.101571e-01   p_joint 9.190476e-04

Joint ci ratio: 2.763685e-01	ci left: 7.875047e-04	ci right 1.044120e-03	k: 200	n:220000
Cons ci ratio: 4.046640e-03	ci left: 8.084364e-01	ci right 8.117190e-01	k: 178218	n:220000
KS ci ratio: 2.763685e-01	ci left: 7.875047e-04	ci right 1.044120e-03	k: 200	n:220000
POTEE   220000 perm   61 sec   (3615 perm/sec)   p_kst 9.090909e-04   p_cons 8.100818e-01   p_joint 9.090909e-04

Joint ci ratio: 2.665964e-01	ci left: 8.140467e-04	ci right 1.068366e-03	k: 215	n:230000
Cons ci ratio: 3.957961e-03	ci left: 8.084517e-01	ci right 8.116622e-01	k: 186314	n:230000
KS ci ratio: 2.665964e-01	ci left: 8.140467e-04	ci right 1.068366e-03	k: 215	n:230000
POTEE   230000 perm   64 sec   (3567 perm/sec)   p_kst 9.347826e-04   p_cons 8.100609e-01   p_joint 9.347826e-04

Joint ci ratio: 2.641646e-01	ci left: 7.956850e-04	ci right 1.041625e-03	k: 219	n:240000
Cons ci ratio: 3.872297e-03	ci left: 8.086713e-01	ci right 8.118129e-01	k: 194459	n:240000
KS ci ratio: 2.641646e-01	ci left: 7.956850e-04	ci right 1.041625e-03	k: 219	n:240000
POTEE   240000 perm   68 sec   (3521 perm/sec)   p_kst 9.125000e-04   p_cons 8.102458e-01   p_joint 9.125000e-04

Joint ci ratio: 2.589217e-01	ci left: 7.974978e-04	ci right 1.038315e-03	k: 228	n:250000
Cons ci ratio: 3.791812e-03	ci left: 8.088859e-01	ci right 8.119629e-01	k: 202607	n:250000
KS ci ratio: 2.589217e-01	ci left: 7.974978e-04	ci right 1.038315e-03	k: 228	n:250000
POTEE   250000 perm   72 sec   (3476 perm/sec)   p_kst 9.120000e-04   p_cons 8.104280e-01   p_joint 9.120000e-04

Joint ci ratio: 2.534467e-01	ci left: 8.028173e-04	ci right 1.039305e-03	k: 238	n:260000
Cons ci ratio: 3.719075e-03	ci left: 8.088416e-01	ci right 8.118592e-01	k: 210692	n:260000
KS ci ratio: 2.534467e-01	ci left: 8.028173e-04	ci right 1.039305e-03	k: 238	n:260000
POTEE   260000 perm   76 sec   (3433 perm/sec)   p_kst 9.153846e-04   p_cons 8.103538e-01   p_joint 9.153846e-04

Joint ci ratio: 2.513545e-01	ci left: 7.869602e-04	ci right 1.016564e-03	k: 242	n:270000
Cons ci ratio: 3.647554e-03	ci left: 8.090389e-01	ci right 8.119989e-01	k: 218841	n:270000
KS ci ratio: 2.513545e-01	ci left: 7.869602e-04	ci right 1.016564e-03	k: 242	n:270000
POTEE   270000 perm   80 sec   (3389 perm/sec)   p_kst 8.962963e-04   p_cons 8.105222e-01   p_joint 8.962963e-04

Joint ci ratio: 2.478114e-01	ci left: 7.822907e-04	ci right 1.006819e-03	k: 249	n:280000
Cons ci ratio: 3.581919e-03	ci left: 8.090577e-01	ci right 8.119644e-01	k: 226944	n:280000
KS ci ratio: 2.478114e-01	ci left: 7.822907e-04	ci right 1.006819e-03	k: 249	n:280000
POTEE   280000 perm   84 sec   (3346 perm/sec)   p_kst 8.892857e-04   p_cons 8.105143e-01   p_joint 8.892857e-04

Joint ci ratio: 2.444141e-01	ci left: 7.779643e-04	ci right 9.977246e-04	k: 256	n:290000
Cons ci ratio: 3.516543e-03	ci left: 8.093524e-01	ci right 8.122069e-01	k: 235127	n:290000
KS ci ratio: 2.444141e-01	ci left: 7.779643e-04	ci right 9.977246e-04	k: 256	n:290000
POTEE   290000 perm   88 sec   (3303 perm/sec)   p_kst 8.827586e-04   p_cons 8.107828e-01   p_joint 8.827586e-04

Joint ci ratio: 2.406969e-01	ci left: 7.770781e-04	ci right 9.927515e-04	k: 264	n:300000
Cons ci ratio: 3.458407e-03	ci left: 8.092902e-01	ci right 8.120972e-01	k: 243209	n:300000
KS ci ratio: 2.406969e-01	ci left: 7.770781e-04	ci right 9.927515e-04	k: 264	n:300000
POTEE   300000 perm   92 sec   (3255 perm/sec)   p_kst 8.800000e-04   p_cons 8.106967e-01   p_joint 8.800000e-04

Joint ci ratio: 2.389025e-01	ci left: 7.641384e-04	ci right 9.744052e-04	k: 268	n:310000
Cons ci ratio: 3.403097e-03	ci left: 8.092291e-01	ci right 8.119909e-01	k: 251290	n:310000
KS ci ratio: 2.389025e-01	ci left: 7.641384e-04	ci right 9.744052e-04	k: 268	n:310000
POTEE   310000 perm   96 sec   (3215 perm/sec)   p_kst 8.645161e-04   p_cons 8.106129e-01   p_joint 8.645161e-04

Joint ci ratio: 2.345816e-01	ci left: 7.696560e-04	ci right 9.770548e-04	k: 278	n:320000
Cons ci ratio: 3.347733e-03	ci left: 8.094135e-01	ci right 8.121308e-01	k: 259448	n:320000
KS ci ratio: 2.345816e-01	ci left: 7.696560e-04	ci right 9.770548e-04	k: 278	n:320000
POTEE   320000 perm   101 sec   (3177 perm/sec)   p_kst 8.687500e-04   p_cons 8.107750e-01   p_joint 8.687500e-04

Joint ci ratio: 2.300888e-01	ci left: 7.777268e-04	ci right 9.827165e-04	k: 289	n:330000
Cons ci ratio: 3.295602e-03	ci left: 8.095293e-01	ci right 8.122046e-01	k: 267587	n:330000
KS ci ratio: 2.300888e-01	ci left: 7.777268e-04	ci right 9.827165e-04	k: 289	n:330000
POTEE   330000 perm   105 sec   (3140 perm/sec)   p_kst 8.757576e-04   p_cons 8.108697e-01   p_joint 8.757576e-04

Joint ci ratio: 2.269796e-01	ci left: 7.770349e-04	ci right 9.786873e-04	k: 297	n:340000
Cons ci ratio: 3.245988e-03	ci left: 8.096239e-01	ci right 8.122591e-01	k: 275721	n:340000
KS ci ratio: 2.269796e-01	ci left: 7.770349e-04	ci right 9.786873e-04	k: 297	n:340000
POTEE   340000 perm   110 sec   (3103 perm/sec)   p_kst 8.735294e-04   p_cons 8.109441e-01   p_joint 8.735294e-04

Joint ci ratio: 2.232641e-01	ci left: 7.817944e-04	ci right 9.809044e-04	k: 307	n:350000
Cons ci ratio: 3.198847e-03	ci left: 8.096846e-01	ci right 8.122816e-01	k: 283845	n:350000
KS ci ratio: 2.232641e-01	ci left: 7.817944e-04	ci right 9.809044e-04	k: 307	n:350000
POTEE   350000 perm   114 sec   (3068 perm/sec)   p_kst 8.771429e-04   p_cons 8.109857e-01   p_joint 8.771429e-04

Joint ci ratio: 2.214749e-01	ci left: 7.731929e-04	ci right 9.683189e-04	k: 312	n:360000
Cons ci ratio: 3.153730e-03	ci left: 8.097395e-01	ci right 8.123000e-01	k: 291968	n:360000
KS ci ratio: 2.214749e-01	ci left: 7.731929e-04	ci right 9.683189e-04	k: 312	n:360000
POTEE   360000 perm   119 sec   (3032 perm/sec)   p_kst 8.666667e-04   p_cons 8.110222e-01   p_joint 8.666667e-04

Joint ci ratio: 2.180191e-01	ci left: 7.778355e-04	ci right 9.706600e-04	k: 322	n:370000
Cons ci ratio: 3.111648e-03	ci left: 8.096751e-01	ci right 8.122011e-01	k: 300048	n:370000
KS ci ratio: 2.180191e-01	ci left: 7.778355e-04	ci right 9.706600e-04	k: 322	n:370000
POTEE   370000 perm   123 sec   (2997 perm/sec)   p_kst 8.702703e-04   p_cons 8.109405e-01   p_joint 8.702703e-04

Joint ci ratio: 2.173492e-01	ci left: 7.623417e-04	ci right 9.506670e-04	k: 324	n:380000
Cons ci ratio: 3.070206e-03	ci left: 8.097146e-01	ci right 8.122070e-01	k: 308166	n:380000
KS ci ratio: 2.173492e-01	ci left: 7.623417e-04	ci right 9.506670e-04	k: 324	n:380000
POTEE   380000 perm   128 sec   (2964 perm/sec)   p_kst 8.526316e-04   p_cons 8.109632e-01   p_joint 8.526316e-04

Joint ci ratio: 2.144007e-01	ci left: 7.646239e-04	ci right 9.506134e-04	k: 333	n:390000
Cons ci ratio: 3.030326e-03	ci left: 8.097574e-01	ci right 8.122175e-01	k: 316286	n:390000
KS ci ratio: 2.144007e-01	ci left: 7.646239e-04	ci right 9.506134e-04	k: 333	n:390000
POTEE   390000 perm   133 sec   (2933 perm/sec)   p_kst 8.538462e-04   p_cons 8.109897e-01   p_joint 8.538462e-04

Joint ci ratio: 2.097410e-01	ci left: 7.810176e-04	ci right 9.663357e-04	k: 348	n:400000
Cons ci ratio: 2.993205e-03	ci left: 8.096704e-01	ci right 8.121000e-01	k: 324355	n:400000
KS ci ratio: 2.097410e-01	ci left: 7.810176e-04	ci right 9.663357e-04	k: 348	n:400000
POTEE   400000 perm   138 sec   (2902 perm/sec)   p_kst 8.700000e-04   p_cons 8.108875e-01   p_joint 8.700000e-04

Joint ci ratio: 2.065112e-01	ci left: 7.873997e-04	ci right 9.709917e-04	k: 359	n:410000
Cons ci ratio: 2.956521e-03	ci left: 8.096808e-01	ci right 8.120806e-01	k: 332462	n:410000
KS ci ratio: 2.065112e-01	ci left: 7.873997e-04	ci right 9.709917e-04	k: 359	n:410000
POTEE   410000 perm   143 sec   (2870 perm/sec)   p_kst 8.756098e-04   p_cons 8.108829e-01   p_joint 8.756098e-04

Joint ci ratio: 2.048121e-01	ci left: 7.822019e-04	ci right 9.628936e-04	k: 365	n:420000
Cons ci ratio: 2.921131e-03	ci left: 8.096933e-01	ci right 8.120643e-01	k: 340570	n:420000
KS ci ratio: 2.048121e-01	ci left: 7.822019e-04	ci right 9.628936e-04	k: 365	n:420000
POTEE   420000 perm   148 sec   (2839 perm/sec)   p_kst 8.690476e-04   p_cons 8.108810e-01   p_joint 8.690476e-04

Joint ci ratio: 2.026100e-01	ci left: 7.816668e-04	ci right 9.600531e-04	k: 373	n:430000
Cons ci ratio: 2.887048e-03	ci left: 8.096983e-01	ci right 8.120416e-01	k: 348675	n:430000
KS ci ratio: 2.026100e-01	ci left: 7.816668e-04	ci right 9.600531e-04	k: 373	n:430000
POTEE   430000 perm   153 sec   (2808 perm/sec)   p_kst 8.674419e-04   p_cons 8.108721e-01   p_joint 8.674419e-04

Joint ci ratio: 2.002152e-01	ci left: 7.833247e-04	ci right 9.597184e-04	k: 382	n:440000
Cons ci ratio: 2.853665e-03	ci left: 8.097534e-01	ci right 8.120697e-01	k: 356802	n:440000
KS ci ratio: 2.002152e-01	ci left: 7.833247e-04	ci right 9.597184e-04	k: 382	n:440000
POTEE   440000 perm   158 sec   (2776 perm/sec)   p_kst 8.681818e-04   p_cons 8.109136e-01   p_joint 8.681818e-04

Joint ci ratio: 1.984107e-01	ci left: 7.806966e-04	ci right 9.547223e-04	k: 389	n:450000
Cons ci ratio: 2.823602e-03	ci left: 8.095679e-01	ci right 8.118592e-01	k: 364822	n:450000
KS ci ratio: 1.984107e-01	ci left: 7.806966e-04	ci right 9.547223e-04	k: 389	n:450000
POTEE   450000 perm   164 sec   (2745 perm/sec)   p_kst 8.644444e-04   p_cons 8.107156e-01   p_joint 8.644444e-04

Joint ci ratio: 1.964066e-01	ci left: 7.802567e-04	ci right 9.522174e-04	k: 397	n:460000
Cons ci ratio: 2.793972e-03	ci left: 8.094450e-01	ci right 8.117119e-01	k: 372867	n:460000
KS ci ratio: 1.964066e-01	ci left: 7.802567e-04	ci right 9.522174e-04	k: 397	n:460000
POTEE   460000 perm   169 sec   (2716 perm/sec)   p_kst 8.630435e-04   p_cons 8.105804e-01   p_joint 8.630435e-04

Joint ci ratio: 1.939845e-01	ci left: 7.838925e-04	ci right 9.542723e-04	k: 407	n:470000
Cons ci ratio: 2.762878e-03	ci left: 8.095920e-01	ci right 8.118340e-01	k: 381036	n:470000
KS ci ratio: 1.939845e-01	ci left: 7.838925e-04	ci right 9.542723e-04	k: 407	n:470000
POTEE   470000 perm   176 sec   (2677 perm/sec)   p_kst 8.659574e-04   p_cons 8.107149e-01   p_joint 8.659574e-04

Joint ci ratio: 1.925742e-01	ci left: 7.794563e-04	ci right 9.474960e-04	k: 413	n:480000
Cons ci ratio: 2.733059e-03	ci left: 8.097037e-01	ci right 8.119217e-01	k: 389191	n:480000
KS ci ratio: 1.925742e-01	ci left: 7.794563e-04	ci right 9.474960e-04	k: 413	n:480000
POTEE   480000 perm   181 sec   (2649 perm/sec)   p_kst 8.604167e-04   p_cons 8.108146e-01   p_joint 8.604167e-04

Joint ci ratio: 1.909668e-01	ci left: 7.771488e-04	ci right 9.431303e-04	k: 420	n:490000
Cons ci ratio: 2.704777e-03	ci left: 8.097434e-01	ci right 8.119386e-01	k: 397313	n:490000
KS ci ratio: 1.909668e-01	ci left: 7.771488e-04	ci right 9.431303e-04	k: 420	n:490000
POTEE   490000 perm   187 sec   (2622 perm/sec)   p_kst 8.571429e-04   p_cons 8.108429e-01   p_joint 8.571429e-04

Joint ci ratio: 1.893990e-01	ci left: 7.749392e-04	ci right 9.389336e-04	k: 427	n:500000
Cons ci ratio: 2.677478e-03	ci left: 8.097677e-01	ci right 8.119407e-01	k: 405428	n:500000
KS ci ratio: 1.893990e-01	ci left: 7.749392e-04	ci right 9.389336e-04	k: 427	n:500000
POTEE   500000 perm   193 sec   (2594 perm/sec)   p_kst 8.540000e-04   p_cons 8.108560e-01   p_joint 8.540000e-04

Joint ci ratio: 1.870107e-01	ci left: 7.802970e-04	ci right 9.431065e-04	k: 438	n:510000
Cons ci ratio: 2.651193e-03	ci left: 8.097675e-01	ci right 8.119191e-01	k: 413531	n:510000
KS ci ratio: 1.870107e-01	ci left: 7.802970e-04	ci right 9.431065e-04	k: 438	n:510000
POTEE   510000 perm   199 sec   (2568 perm/sec)   p_kst 8.588235e-04   p_cons 8.108451e-01   p_joint 8.588235e-04

Joint ci ratio: 1.853298e-01	ci left: 7.799589e-04	ci right 9.410707e-04	k: 446	n:520000
Cons ci ratio: 2.625551e-03	ci left: 8.097809e-01	ci right 8.119117e-01	k: 421641	n:520000
KS ci ratio: 1.853298e-01	ci left: 7.799589e-04	ci right 9.410707e-04	k: 446	n:520000
POTEE   520000 perm   205 sec   (2542 perm/sec)   p_kst 8.576923e-04   p_cons 8.108481e-01   p_joint 8.576923e-04

Joint ci ratio: 1.840988e-01	ci left: 7.760398e-04	ci right 9.351585e-04	k: 452	n:530000
Cons ci ratio: 2.599712e-03	ci left: 8.099036e-01	ci right 8.120137e-01	k: 429809	n:530000
KS ci ratio: 1.840988e-01	ci left: 7.760398e-04	ci right 9.351585e-04	k: 452	n:530000
POTEE   530000 perm   211 sec   (2516 perm/sec)   p_kst 8.528302e-04   p_cons 8.109604e-01   p_joint 8.528302e-04

Joint ci ratio: 1.830917e-01	ci left: 7.705022e-04	ci right 9.275253e-04	k: 457	n:540000
Cons ci ratio: 2.575506e-03	ci left: 8.099161e-01	ci right 8.120065e-01	k: 437920	n:540000
KS ci ratio: 1.830917e-01	ci left: 7.705022e-04	ci right 9.275253e-04	k: 457	n:540000
POTEE   540000 perm   217 sec   (2491 perm/sec)   p_kst 8.462963e-04   p_cons 8.109630e-01   p_joint 8.462963e-04

Joint ci ratio: 1.817086e-01	ci left: 7.686392e-04	ci right 9.239691e-04	k: 464	n:550000
Cons ci ratio: 2.552766e-03	ci left: 8.098316e-01	ci right 8.119033e-01	k: 445978	n:550000
KS ci ratio: 1.817086e-01	ci left: 7.686392e-04	ci right 9.239691e-04	k: 464	n:550000
POTEE   550000 perm   223 sec   (2466 perm/sec)   p_kst 8.436364e-04   p_cons 8.108691e-01   p_joint 8.436364e-04

Joint ci ratio: 1.809328e-01	ci left: 7.617319e-04	ci right 9.149367e-04	k: 468	n:560000
Cons ci ratio: 2.530573e-03	ci left: 8.097556e-01	ci right 8.118091e-01	k: 454039	n:560000
KS ci ratio: 1.809328e-01	ci left: 7.617319e-04	ci right 9.149367e-04	k: 468	n:560000
POTEE   560000 perm   229 sec   (2442 perm/sec)   p_kst 8.357143e-04   p_cons 8.107839e-01   p_joint 8.357143e-04

Joint ci ratio: 1.790339e-01	ci left: 7.651218e-04	ci right 9.172184e-04	k: 478	n:570000
Cons ci ratio: 2.508389e-03	ci left: 8.097509e-01	ci right 8.117863e-01	k: 462139	n:570000
KS ci ratio: 1.790339e-01	ci left: 7.651218e-04	ci right 9.172184e-04	k: 478	n:570000
POTEE   570000 perm   236 sec   (2419 perm/sec)   p_kst 8.385965e-04   p_cons 8.107702e-01   p_joint 8.385965e-04

Joint ci ratio: 1.775574e-01	ci left: 7.651076e-04	ci right 9.158123e-04	k: 486	n:580000
Cons ci ratio: 2.486555e-03	ci left: 8.097741e-01	ci right 8.117918e-01	k: 470255	n:580000
KS ci ratio: 1.775574e-01	ci left: 7.651076e-04	ci right 9.158123e-04	k: 486	n:580000
POTEE   580000 perm   242 sec   (2396 perm/sec)   p_kst 8.379310e-04   p_cons 8.107845e-01   p_joint 8.379310e-04

Joint ci ratio: 1.770138e-01	ci left: 7.569985e-04	ci right 9.056006e-04	k: 489	n:590000
Cons ci ratio: 2.464682e-03	ci left: 8.098713e-01	ci right 8.118715e-01	k: 478415	n:590000
KS ci ratio: 1.770138e-01	ci left: 7.569985e-04	ci right 9.056006e-04	k: 489	n:590000
POTEE   590000 perm   249 sec   (2373 perm/sec)   p_kst 8.288136e-04   p_cons 8.108729e-01   p_joint 8.288136e-04

Joint ci ratio: 1.750594e-01	ci left: 7.619076e-04	ci right 9.096474e-04	k: 500	n:600000
Cons ci ratio: 2.443562e-03	ci left: 8.099419e-01	ci right 8.119251e-01	k: 486561	n:600000
KS ci ratio: 1.750594e-01	ci left: 7.619076e-04	ci right 9.096474e-04	k: 500	n:600000
POTEE   600000 perm   255 sec   (2350 perm/sec)   p_kst 8.333333e-04   p_cons 8.109350e-01   p_joint 8.333333e-04

Joint ci ratio: 1.735078e-01	ci left: 7.635278e-04	ci right 9.101321e-04	k: 509	n:610000
Cons ci ratio: 2.422677e-03	ci left: 8.100481e-01	ci right 8.120145e-01	k: 494730	n:610000
KS ci ratio: 1.735078e-01	ci left: 7.635278e-04	ci right 9.101321e-04	k: 509	n:610000
POTEE   610000 perm   262 sec   (2329 perm/sec)   p_kst 8.344262e-04   p_cons 8.110328e-01   p_joint 8.344262e-04

Joint ci ratio: 1.721628e-01	ci left: 7.635579e-04	ci right 9.089134e-04	k: 517	n:620000
Cons ci ratio: 2.403140e-03	ci left: 8.100458e-01	ci right 8.119964e-01	k: 502834	n:620000
KS ci ratio: 1.721628e-01	ci left: 7.635579e-04	ci right 9.089134e-04	k: 517	n:620000
POTEE   620000 perm   269 sec   (2307 perm/sec)   p_kst 8.338710e-04   p_cons 8.110226e-01   p_joint 8.338710e-04

Joint ci ratio: 1.697221e-01	ci left: 7.742292e-04	ci right 9.193130e-04	k: 532	n:630000
Cons ci ratio: 2.384204e-03	ci left: 8.100262e-01	ci right 8.119614e-01	k: 510927	n:630000
KS ci ratio: 1.697221e-01	ci left: 7.742292e-04	ci right 9.193130e-04	k: 532	n:630000
POTEE   630000 perm   276 sec   (2286 perm/sec)   p_kst 8.444444e-04   p_cons 8.109952e-01   p_joint 8.444444e-04

Joint ci ratio: 1.684626e-01	ci left: 7.741029e-04	ci right 9.179772e-04	k: 540	n:640000
Cons ci ratio: 2.366432e-03	ci left: 8.099134e-01	ci right 8.118338e-01	k: 518960	n:640000
KS ci ratio: 1.684626e-01	ci left: 7.741029e-04	ci right 9.179772e-04	k: 540	n:640000
POTEE   640000 perm   282 sec   (2266 perm/sec)   p_kst 8.437500e-04   p_cons 8.108750e-01   p_joint 8.437500e-04

Joint ci ratio: 1.679981e-01	ci left: 7.666144e-04	ci right 9.086643e-04	k: 543	n:650000
Cons ci ratio: 2.348178e-03	ci left: 8.099181e-01	ci right 8.118237e-01	k: 527067	n:650000
KS ci ratio: 1.679981e-01	ci left: 7.666144e-04	ci right 9.086643e-04	k: 543	n:650000
POTEE   650000 perm   289 sec   (2246 perm/sec)   p_kst 8.353846e-04   p_cons 8.108723e-01   p_joint 8.353846e-04

Joint ci ratio: 1.661749e-01	ci left: 7.724208e-04	ci right 9.138379e-04	k: 555	n:660000
Cons ci ratio: 2.330560e-03	ci left: 8.098939e-01	ci right 8.117851e-01	k: 535155	n:660000
KS ci ratio: 1.661749e-01	ci left: 7.724208e-04	ci right 9.138379e-04	k: 555	n:660000
POTEE   660000 perm   296 sec   (2228 perm/sec)   p_kst 8.409091e-04   p_cons 8.108409e-01   p_joint 8.409091e-04

Joint ci ratio: 1.649922e-01	ci left: 7.723376e-04	ci right 9.126332e-04	k: 563	n:670000
Cons ci ratio: 2.313050e-03	ci left: 8.099079e-01	ci right 8.117849e-01	k: 543268	n:670000
KS ci ratio: 1.649922e-01	ci left: 7.723376e-04	ci right 9.126332e-04	k: 563	n:670000
POTEE   670000 perm   303 sec   (2209 perm/sec)   p_kst 8.402985e-04   p_cons 8.108478e-01   p_joint 8.402985e-04

Joint ci ratio: 1.645558e-01	ci left: 7.652093e-04	ci right 9.038059e-04	k: 566	n:680000
Cons ci ratio: 2.295842e-03	ci left: 8.099333e-01	ci right 8.117964e-01	k: 551389	n:680000
KS ci ratio: 1.645558e-01	ci left: 7.652093e-04	ci right 9.038059e-04	k: 566	n:680000
POTEE   680000 perm   310 sec   (2191 perm/sec)   p_kst 8.323529e-04   p_cons 8.108662e-01   p_joint 8.323529e-04

Joint ci ratio: 1.632650e-01	ci left: 7.666278e-04	ci right 9.042853e-04	k: 575	n:690000
Cons ci ratio: 2.279442e-03	ci left: 8.099000e-01	ci right 8.117496e-01	k: 559470	n:690000
KS ci ratio: 1.632650e-01	ci left: 7.666278e-04	ci right 9.042853e-04	k: 575	n:690000
POTEE   690000 perm   318 sec   (2173 perm/sec)   p_kst 8.333333e-04   p_cons 8.108261e-01   p_joint 8.333333e-04

Joint ci ratio: 1.625614e-01	ci left: 7.625275e-04	ci right 8.988009e-04	k: 580	n:700000
Cons ci ratio: 2.263273e-03	ci left: 8.098833e-01	ci right 8.117198e-01	k: 567562	n:700000
KS ci ratio: 1.625614e-01	ci left: 7.625275e-04	ci right 8.988009e-04	k: 580	n:700000
POTEE   700000 perm   325 sec   (2155 perm/sec)   p_kst 8.285714e-04   p_cons 8.108029e-01   p_joint 8.285714e-04

Joint ci ratio: 1.614537e-01	ci left: 7.625985e-04	ci right 8.978658e-04	k: 588	n:710000
Cons ci ratio: 2.247609e-03	ci left: 8.098447e-01	ci right 8.116683e-01	k: 575638	n:710000
KS ci ratio: 1.614537e-01	ci left: 7.625985e-04	ci right 8.978658e-04	k: 588	n:710000
POTEE   710000 perm   332 sec   (2138 perm/sec)   p_kst 8.281690e-04   p_cons 8.107577e-01   p_joint 8.281690e-04

Joint ci ratio: 1.597004e-01	ci left: 7.693371e-04	ci right 9.041757e-04	k: 601	n:720000
Cons ci ratio: 2.232356e-03	ci left: 8.097946e-01	ci right 8.116057e-01	k: 583705	n:720000
KS ci ratio: 1.597004e-01	ci left: 7.693371e-04	ci right 9.041757e-04	k: 601	n:720000
POTEE   720000 perm   339 sec   (2122 perm/sec)   p_kst 8.347222e-04   p_cons 8.107014e-01   p_joint 8.347222e-04

Joint ci ratio: 1.585197e-01	ci left: 7.706361e-04	ci right 9.046089e-04	k: 610	n:730000
Cons ci ratio: 2.217260e-03	ci left: 8.097665e-01	ci right 8.115653e-01	k: 591787	n:730000
KS ci ratio: 1.585197e-01	ci left: 7.706361e-04	ci right 9.046089e-04	k: 610	n:730000
POTEE   730000 perm   347 sec   (2106 perm/sec)   p_kst 8.356164e-04   p_cons 8.106671e-01   p_joint 8.356164e-04

Joint ci ratio: 1.569853e-01	ci left: 7.757984e-04	ci right 9.092401e-04	k: 622	n:740000
Cons ci ratio: 2.202419e-03	ci left: 8.097460e-01	ci right 8.115327e-01	k: 599874	n:740000
KS ci ratio: 1.569853e-01	ci left: 7.757984e-04	ci right 9.092401e-04	k: 622	n:740000
POTEE   740000 perm   354 sec   (2090 perm/sec)   p_kst 8.405405e-04   p_cons 8.106405e-01   p_joint 8.405405e-04

Joint ci ratio: 1.557401e-01	ci left: 7.782661e-04	ci right 9.109714e-04	k: 632	n:750000
Cons ci ratio: 2.188108e-03	ci left: 8.096927e-01	ci right 8.114676e-01	k: 607936	n:750000
KS ci ratio: 1.557401e-01	ci left: 7.782661e-04	ci right 9.109714e-04	k: 632	n:750000
POTEE   750000 perm   362 sec   (2071 perm/sec)   p_kst 8.426667e-04   p_cons 8.105813e-01   p_joint 8.426667e-04

Joint ci ratio: 1.551290e-01	ci left: 7.743487e-04	ci right 9.058197e-04	k: 637	n:760000
Cons ci ratio: 2.173952e-03	ci left: 8.096579e-01	ci right 8.114213e-01	k: 616011	n:760000
KS ci ratio: 1.551290e-01	ci left: 7.743487e-04	ci right 9.058197e-04	k: 637	n:760000
POTEE   760000 perm   370 sec   (2054 perm/sec)   p_kst 8.381579e-04   p_cons 8.105408e-01   p_joint 8.381579e-04

Joint ci ratio: 1.538085e-01	ci left: 7.780259e-04	ci right 9.088932e-04	k: 648	n:770000
Cons ci ratio: 2.160670e-03	ci left: 8.095383e-01	ci right 8.112906e-01	k: 624020	n:770000
KS ci ratio: 1.538085e-01	ci left: 7.780259e-04	ci right 9.088932e-04	k: 648	n:770000
POTEE   770000 perm   378 sec   (2039 perm/sec)   p_kst 8.415584e-04   p_cons 8.104156e-01   p_joint 8.415584e-04

Joint ci ratio: 1.529858e-01	ci left: 7.766810e-04	ci right 9.065593e-04	k: 655	n:780000
Cons ci ratio: 2.147493e-03	ci left: 8.094410e-01	ci right 8.111824e-01	k: 632044	n:780000
KS ci ratio: 1.529858e-01	ci left: 7.766810e-04	ci right 9.065593e-04	k: 655	n:780000
POTEE   780000 perm   385 sec   (2024 perm/sec)   p_kst 8.397436e-04   p_cons 8.103128e-01   p_joint 8.397436e-04

Joint ci ratio: 1.514917e-01	ci left: 7.826786e-04	ci right 9.121657e-04	k: 668	n:790000
Cons ci ratio: 2.133578e-03	ci left: 8.094869e-01	ci right 8.112171e-01	k: 640179	n:790000
KS ci ratio: 1.514917e-01	ci left: 7.826786e-04	ci right 9.121657e-04	k: 668	n:790000
POTEE   790000 perm   393 sec   (2008 perm/sec)   p_kst 8.455696e-04   p_cons 8.103532e-01   p_joint 8.455696e-04

Joint ci ratio: 1.503718e-01	ci left: 7.849232e-04	ci right 9.137353e-04	k: 678	n:800000
Cons ci ratio: 2.120274e-03	ci left: 8.094817e-01	ci right 8.112011e-01	k: 648274	n:800000
KS ci ratio: 1.503718e-01	ci left: 7.849232e-04	ci right 9.137353e-04	k: 678	n:800000
POTEE   800000 perm   401 sec   (1993 perm/sec)   p_kst 8.475000e-04   p_cons 8.103425e-01   p_joint 8.475000e-04

Joint ci ratio: 1.489523e-01	ci left: 7.906813e-04	ci right 9.191044e-04	k: 691	n:810000
Cons ci ratio: 2.107869e-03	ci left: 8.093814e-01	ci right 8.110905e-01	k: 656292	n:810000
KS ci ratio: 1.489523e-01	ci left: 7.906813e-04	ci right 9.191044e-04	k: 691	n:810000
POTEE   810000 perm   409 sec   (1978 perm/sec)   p_kst 8.530864e-04   p_cons 8.102370e-01   p_joint 8.530864e-04

Joint ci ratio: 1.484174e-01	ci left: 7.869095e-04	ci right 9.142202e-04	k: 696	n:820000
Cons ci ratio: 2.095445e-03	ci left: 8.093178e-01	ci right 8.110166e-01	k: 664338	n:820000
KS ci ratio: 1.484174e-01	ci left: 7.869095e-04	ci right 9.142202e-04	k: 696	n:820000
POTEE   820000 perm   418 sec   (1963 perm/sec)   p_kst 8.487805e-04   p_cons 8.101683e-01   p_joint 8.487805e-04

Joint ci ratio: 1.479937e-01	ci left: 7.820690e-04	ci right 9.082035e-04	k: 700	n:830000
Cons ci ratio: 2.083751e-03	ci left: 8.091797e-01	ci right 8.108688e-01	k: 672321	n:830000
KS ci ratio: 1.479937e-01	ci left: 7.820690e-04	ci right 9.082035e-04	k: 700	n:830000
POTEE   830000 perm   426 sec   (1948 perm/sec)   p_kst 8.433735e-04   p_cons 8.100253e-01   p_joint 8.433735e-04

Joint ci ratio: 1.470527e-01	ci left: 7.830775e-04	ci right 9.085010e-04	k: 709	n:840000
Cons ci ratio: 2.071425e-03	ci left: 8.091677e-01	ci right 8.108468e-01	k: 680407	n:840000
KS ci ratio: 1.470527e-01	ci left: 7.830775e-04	ci right 9.085010e-04	k: 709	n:840000
POTEE   840000 perm   434 sec   (1933 perm/sec)   p_kst 8.440476e-04   p_cons 8.100083e-01   p_joint 8.440476e-04

Joint ci ratio: 1.456235e-01	ci left: 7.897326e-04	ci right 9.148858e-04	k: 723	n:850000
Cons ci ratio: 2.058969e-03	ci left: 8.092080e-01	ci right 8.108770e-01	k: 688537	n:850000
KS ci ratio: 1.456235e-01	ci left: 7.897326e-04	ci right 9.148858e-04	k: 723	n:850000
POTEE   850000 perm   443 sec   (1919 perm/sec)   p_kst 8.505882e-04   p_cons 8.100435e-01   p_joint 8.505882e-04

Joint ci ratio: 1.449247e-01	ci left: 7.883933e-04	ci right 9.126828e-04	k: 730	n:860000
Cons ci ratio: 2.046796e-03	ci left: 8.092380e-01	ci right 8.108971e-01	k: 696659	n:860000
KS ci ratio: 1.449247e-01	ci left: 7.883933e-04	ci right 9.126828e-04	k: 730	n:860000
POTEE   860000 perm   452 sec   (1904 perm/sec)   p_kst 8.488372e-04   p_cons 8.100686e-01   p_joint 8.488372e-04

Joint ci ratio: 1.440407e-01	ci left: 7.893022e-04	ci right 9.129107e-04	k: 739	n:870000
Cons ci ratio: 2.034738e-03	ci left: 8.092823e-01	ci right 8.109318e-01	k: 704794	n:870000
KS ci ratio: 1.440407e-01	ci left: 7.893022e-04	ci right 9.129107e-04	k: 739	n:870000
POTEE   870000 perm   460 sec   (1890 perm/sec)   p_kst 8.494253e-04   p_cons 8.101080e-01   p_joint 8.494253e-04

Joint ci ratio: 1.435568e-01	ci left: 7.858101e-04	ci right 9.084229e-04	k: 744	n:880000
Cons ci ratio: 2.022749e-03	ci left: 8.093472e-01	ci right 8.109871e-01	k: 712948	n:880000
KS ci ratio: 1.435568e-01	ci left: 7.858101e-04	ci right 9.084229e-04	k: 744	n:880000
POTEE   880000 perm   469 sec   (1876 perm/sec)   p_kst 8.454545e-04   p_cons 8.101682e-01   p_joint 8.454545e-04

Joint ci ratio: 1.428872e-01	ci left: 7.845641e-04	ci right 9.063628e-04	k: 751	n:890000
Cons ci ratio: 2.011681e-03	ci left: 8.093016e-01	ci right 8.109324e-01	k: 721005	n:890000
KS ci ratio: 1.428872e-01	ci left: 7.845641e-04	ci right 9.063628e-04	k: 751	n:890000
POTEE   890000 perm   477 sec   (1864 perm/sec)   p_kst 8.438202e-04   p_cons 8.101180e-01   p_joint 8.438202e-04

Joint ci ratio: 1.421332e-01	ci left: 7.844187e-04	ci right 9.054977e-04	k: 759	n:900000
Cons ci ratio: 2.000157e-03	ci left: 8.093549e-01	ci right 8.109764e-01	k: 729150	n:900000
KS ci ratio: 1.421332e-01	ci left: 7.844187e-04	ci right 9.054977e-04	k: 759	n:900000
POTEE   900000 perm   486 sec   (1852 perm/sec)   p_kst 8.433333e-04   p_cons 8.101667e-01   p_joint 8.433333e-04

Joint ci ratio: 1.412990e-01	ci left: 7.853382e-04	ci right 9.057877e-04	k: 768	n:910000
Cons ci ratio: 1.988751e-03	ci left: 8.094192e-01	ci right 8.110316e-01	k: 737306	n:910000
KS ci ratio: 1.412990e-01	ci left: 7.853382e-04	ci right 9.057877e-04	k: 768	n:910000
POTEE   910000 perm   495 sec   (1840 perm/sec)   p_kst 8.439560e-04   p_cons 8.102264e-01   p_joint 8.439560e-04

Joint ci ratio: 1.407512e-01	ci left: 7.830934e-04	ci right 9.026940e-04	k: 774	n:920000
Cons ci ratio: 1.977810e-03	ci left: 8.094396e-01	ci right 8.110432e-01	k: 745423	n:920000
KS ci ratio: 1.407512e-01	ci left: 7.830934e-04	ci right 9.026940e-04	k: 774	n:920000
POTEE   920000 perm   503 sec   (1828 perm/sec)   p_kst 8.413043e-04   p_cons 8.102424e-01   p_joint 8.413043e-04

Joint ci ratio: 1.402096e-01	ci left: 7.808979e-04	ci right 8.996659e-04	k: 780	n:930000
Cons ci ratio: 1.966586e-03	ci left: 8.095318e-01	ci right 8.111265e-01	k: 753607	n:930000
KS ci ratio: 1.402096e-01	ci left: 7.808979e-04	ci right 8.996659e-04	k: 780	n:930000
POTEE   930000 perm   512 sec   (1816 perm/sec)   p_kst 8.387097e-04   p_cons 8.103301e-01   p_joint 8.387097e-04

Joint ci ratio: 1.394086e-01	ci left: 7.818300e-04	ci right 9.000041e-04	k: 789	n:940000
Cons ci ratio: 1.955565e-03	ci left: 8.096199e-01	ci right 8.112058e-01	k: 761789	n:940000
KS ci ratio: 1.394086e-01	ci left: 7.818300e-04	ci right 9.000041e-04	k: 789	n:940000
POTEE   940000 perm   521 sec   (1805 perm/sec)   p_kst 8.393617e-04   p_cons 8.104138e-01   p_joint 8.393617e-04

Joint ci ratio: 1.383615e-01	ci left: 7.857930e-04	ci right 9.036005e-04	k: 801	n:950000
Cons ci ratio: 1.945300e-03	ci left: 8.096156e-01	ci right 8.111931e-01	k: 769885	n:950000
KS ci ratio: 1.383615e-01	ci left: 7.857930e-04	ci right 9.036005e-04	k: 801	n:950000
POTEE   950000 perm   530 sec   (1794 perm/sec)   p_kst 8.431579e-04   p_cons 8.104053e-01   p_joint 8.431579e-04

Joint ci ratio: 1.377617e-01	ci left: 7.846475e-04	ci right 9.017314e-04	k: 808	n:960000
Cons ci ratio: 1.935070e-03	ci left: 8.096311e-01	ci right 8.112003e-01	k: 778000	n:960000
KS ci ratio: 1.377617e-01	ci left: 7.846475e-04	ci right 9.017314e-04	k: 808	n:960000
POTEE   960000 perm   539 sec   (1781 perm/sec)   p_kst 8.416667e-04   p_cons 8.104167e-01   p_joint 8.416667e-04

Joint ci ratio: 1.371696e-01	ci left: 7.835266e-04	ci right 8.998997e-04	k: 815	n:970000
Cons ci ratio: 1.924579e-03	ci left: 8.097135e-01	ci right 8.112743e-01	k: 786180	n:970000
KS ci ratio: 1.371696e-01	ci left: 7.835266e-04	ci right 8.998997e-04	k: 815	n:970000
POTEE   970000 perm   548 sec   (1770 perm/sec)   p_kst 8.402062e-04   p_cons 8.104948e-01   p_joint 8.402062e-04

Joint ci ratio: 1.364194e-01	ci left: 7.844008e-04	ci right 9.002148e-04	k: 824	n:980000
Cons ci ratio: 1.914925e-03	ci left: 8.096869e-01	ci right 8.112399e-01	k: 794255	n:980000
KS ci ratio: 1.364194e-01	ci left: 7.844008e-04	ci right 9.002148e-04	k: 824	n:980000
POTEE   980000 perm   557 sec   (1758 perm/sec)   p_kst 8.408163e-04   p_cons 8.104643e-01   p_joint 8.408163e-04

Joint ci ratio: 1.355187e-01	ci left: 7.872108e-04	ci right 9.026105e-04	k: 835	n:990000
Cons ci ratio: 1.905497e-03	ci left: 8.096477e-01	ci right 8.111929e-01	k: 802317	n:990000
KS ci ratio: 1.355187e-01	ci left: 7.872108e-04	ci right 9.026105e-04	k: 835	n:990000
POTEE   990000 perm   567 sec   (1746 perm/sec)   p_kst 8.434343e-04   p_cons 8.104212e-01   p_joint 8.434343e-04

Joint ci ratio: 1.351155e-01	ci left: 7.841694e-04	ci right 8.987537e-04	k: 840	n:1000000
Cons ci ratio: 1.896236e-03	ci left: 8.096043e-01	ci right 8.111419e-01	k: 810374	n:1000000
KS ci ratio: 1.351155e-01	ci left: 7.841694e-04	ci right 8.987537e-04	k: 840	n:1000000
POTEE   1000000 perm   577 sec   (1733 perm/sec)   p_kst 8.400000e-04   p_cons 8.103740e-01   p_joint 8.400000e-04

Joint ci ratio: 1.344774e-01	ci left: 7.840590e-04	ci right 8.980429e-04	k: 848	n:1010000
Cons ci ratio: 1.886897e-03	ci left: 8.095965e-01	ci right 8.111265e-01	k: 818466	n:1010000
KS ci ratio: 1.344774e-01	ci left: 7.840590e-04	ci right 8.980429e-04	k: 848	n:1010000
POTEE   1010000 perm   586 sec   (1723 perm/sec)   p_kst 8.396040e-04   p_cons 8.103624e-01   p_joint 8.396040e-04

Joint ci ratio: 1.336923e-01	ci left: 7.858472e-04	ci right 8.993711e-04	k: 858	n:1020000
Cons ci ratio: 1.877407e-03	ci left: 8.096360e-01	ci right 8.111584e-01	k: 826606	n:1020000
KS ci ratio: 1.336923e-01	ci left: 7.858472e-04	ci right 8.993711e-04	k: 858	n:1020000
POTEE   1020000 perm   596 sec   (1711 perm/sec)   p_kst 8.411765e-04   p_cons 8.103980e-01   p_joint 8.411765e-04

Joint ci ratio: 1.331509e-01	ci left: 7.847869e-04	ci right 8.976622e-04	k: 865	n:1030000
Cons ci ratio: 1.868672e-03	ci left: 8.095736e-01	ci right 8.110888e-01	k: 834642	n:1030000
KS ci ratio: 1.331509e-01	ci left: 7.847869e-04	ci right 8.976622e-04	k: 865	n:1030000
POTEE   1030000 perm   606 sec   (1700 perm/sec)   p_kst 8.398058e-04   p_cons 8.103320e-01   p_joint 8.398058e-04

Joint ci ratio: 1.322377e-01	ci left: 7.883964e-04	ci right 9.009520e-04	k: 877	n:1040000
Cons ci ratio: 1.859209e-03	ci left: 8.096530e-01	ci right 8.111607e-01	k: 842824	n:1040000
KS ci ratio: 1.322377e-01	ci left: 7.883964e-04	ci right 9.009520e-04	k: 877	n:1040000
POTEE   1040000 perm   616 sec   (1688 perm/sec)   p_kst 8.432692e-04   p_cons 8.104077e-01   p_joint 8.432692e-04

Joint ci ratio: 1.318630e-01	ci left: 7.854924e-04	ci right 8.972907e-04	k: 882	n:1050000
Cons ci ratio: 1.850587e-03	ci left: 8.096146e-01	ci right 8.111151e-01	k: 850884	n:1050000
KS ci ratio: 1.318630e-01	ci left: 7.854924e-04	ci right 8.972907e-04	k: 882	n:1050000
POTEE   1050000 perm   626 sec   (1678 perm/sec)   p_kst 8.400000e-04   p_cons 8.103657e-01   p_joint 8.400000e-04

Joint ci ratio: 1.312697e-01	ci left: 7.853808e-04	ci right 8.966211e-04	k: 890	n:1060000
Cons ci ratio: 1.841728e-03	ci left: 8.096364e-01	ci right 8.111298e-01	k: 859007	n:1060000
KS ci ratio: 1.312697e-01	ci left: 7.853808e-04	ci right 8.966211e-04	k: 890	n:1060000
POTEE   1060000 perm   635 sec   (1669 perm/sec)   p_kst 8.396226e-04   p_cons 8.103840e-01   p_joint 8.396226e-04

Joint ci ratio: 1.306116e-01	ci left: 7.861765e-04	ci right 8.969281e-04	k: 899	n:1070000
Cons ci ratio: 1.832978e-03	ci left: 8.096607e-01	ci right 8.111470e-01	k: 867133	n:1070000
KS ci ratio: 1.306116e-01	ci left: 7.861765e-04	ci right 8.969281e-04	k: 899	n:1070000
POTEE   1070000 perm   645 sec   (1659 perm/sec)   p_kst 8.401869e-04   p_cons 8.104047e-01   p_joint 8.401869e-04

Joint ci ratio: 1.298919e-01	ci left: 7.878547e-04	ci right 8.981839e-04	k: 909	n:1080000
Cons ci ratio: 1.824390e-03	ci left: 8.096780e-01	ci right 8.111574e-01	k: 875252	n:1080000
KS ci ratio: 1.298919e-01	ci left: 7.878547e-04	ci right 8.981839e-04	k: 909	n:1080000
POTEE   1080000 perm   655 sec   (1649 perm/sec)   p_kst 8.416667e-04   p_cons 8.104185e-01   p_joint 8.416667e-04

Joint ci ratio: 1.293247e-01	ci left: 7.877282e-04	ci right 8.975210e-04	k: 917	n:1090000
Cons ci ratio: 1.816122e-03	ci left: 8.096610e-01	ci right 8.111337e-01	k: 883334	n:1090000
KS ci ratio: 1.293247e-01	ci left: 7.877282e-04	ci right 8.975210e-04	k: 917	n:1090000
POTEE   1090000 perm   665 sec   (1640 perm/sec)   p_kst 8.412844e-04   p_cons 8.103982e-01   p_joint 8.412844e-04

Joint ci ratio: 1.287649e-01	ci left: 7.876050e-04	ci right 8.968691e-04	k: 925	n:1100000
Cons ci ratio: 1.807971e-03	ci left: 8.096434e-01	ci right 8.111095e-01	k: 891415	n:1100000
KS ci ratio: 1.287649e-01	ci left: 7.876050e-04	ci right 8.968691e-04	k: 925	n:1100000
POTEE   1100000 perm   675 sec   (1630 perm/sec)   p_kst 8.409091e-04   p_cons 8.103773e-01   p_joint 8.409091e-04

Joint ci ratio: 1.279384e-01	ci left: 7.909732e-04	ci right 8.999468e-04	k: 937	n:1110000
Cons ci ratio: 1.799412e-03	ci left: 8.097146e-01	ci right 8.111738e-01	k: 899594	n:1110000
KS ci ratio: 1.279384e-01	ci left: 7.909732e-04	ci right 8.999468e-04	k: 937	n:1110000
POTEE   1110000 perm   685 sec   (1621 perm/sec)   p_kst 8.441441e-04   p_cons 8.104450e-01   p_joint 8.441441e-04

Joint ci ratio: 1.273963e-01	ci left: 7.908257e-04	ci right 8.992824e-04	k: 945	n:1120000
Cons ci ratio: 1.791316e-03	ci left: 8.097256e-01	ci right 8.111782e-01	k: 907707	n:1120000
KS ci ratio: 1.273963e-01	ci left: 7.908257e-04	ci right 8.992824e-04	k: 945	n:1120000
POTEE   1120000 perm   695 sec   (1612 perm/sec)   p_kst 8.437500e-04   p_cons 8.104527e-01   p_joint 8.437500e-04

Joint ci ratio: 1.268610e-01	ci left: 7.906817e-04	ci right 8.986289e-04	k: 953	n:1130000
Cons ci ratio: 1.783555e-03	ci left: 8.096973e-01	ci right 8.111436e-01	k: 915776	n:1130000
KS ci ratio: 1.268610e-01	ci left: 7.906817e-04	ci right 8.986289e-04	k: 953	n:1130000
POTEE   1130000 perm   705 sec   (1603 perm/sec)   p_kst 8.433628e-04   p_cons 8.104212e-01   p_joint 8.433628e-04

Joint ci ratio: 1.265301e-01	ci left: 7.879928e-04	ci right 8.952712e-04	k: 958	n:1140000
Cons ci ratio: 1.775939e-03	ci left: 8.096616e-01	ci right 8.111017e-01	k: 923836	n:1140000
KS ci ratio: 1.265301e-01	ci left: 7.879928e-04	ci right 8.952712e-04	k: 958	n:1140000
POTEE   1140000 perm   715 sec   (1594 perm/sec)   p_kst 8.403509e-04   p_cons 8.103825e-01   p_joint 8.403509e-04

Joint ci ratio: 1.256162e-01	ci left: 7.929308e-04	ci right 9.000437e-04	k: 972	n:1150000
Cons ci ratio: 1.768630e-03	ci left: 8.095901e-01	ci right 8.110240e-01	k: 931854	n:1150000
KS ci ratio: 1.256162e-01	ci left: 7.929308e-04	ci right 9.000437e-04	k: 972	n:1150000
POTEE   1150000 perm   726 sec   (1585 perm/sec)   p_kst 8.452174e-04   p_cons 8.103078e-01   p_joint 8.452174e-04

Joint ci ratio: 1.248485e-01	ci left: 7.961160e-04	ci right 9.029533e-04	k: 984	n:1160000
Cons ci ratio: 1.761134e-03	ci left: 8.095681e-01	ci right 8.109959e-01	k: 939928	n:1160000
KS ci ratio: 1.248485e-01	ci left: 7.961160e-04	ci right 9.029533e-04	k: 984	n:1160000
POTEE   1160000 perm   736 sec   (1575 perm/sec)   p_kst 8.482759e-04   p_cons 8.102828e-01   p_joint 8.482759e-04

Joint ci ratio: 1.242194e-01	ci left: 7.975924e-04	ci right 9.040489e-04	k: 994	n:1170000
Cons ci ratio: 1.753947e-03	ci left: 8.095088e-01	ci right 8.109307e-01	k: 947958	n:1170000
KS ci ratio: 1.242194e-01	ci left: 7.975924e-04	ci right 9.040489e-04	k: 994	n:1170000
POTEE   1170000 perm   747 sec   (1567 perm/sec)   p_kst 8.495726e-04   p_cons 8.102205e-01   p_joint 8.495726e-04

Joint ci ratio: 1.238467e-01	ci left: 7.957601e-04	ci right 9.016299e-04	k: 1000	n:1180000
Cons ci ratio: 1.746514e-03	ci left: 8.095091e-01	ci right 8.109250e-01	k: 956057	n:1180000
KS ci ratio: 1.238467e-01	ci left: 7.957601e-04	ci right 9.016299e-04	k: 1000	n:1180000
POTEE   1180000 perm   758 sec   (1558 perm/sec)   p_kst 8.474576e-04   p_cons 8.102178e-01   p_joint 8.474576e-04

Joint ci ratio: 1.229894e-01	ci left: 8.004747e-04	ci right 9.061808e-04	k: 1014	n:1190000
Cons ci ratio: 1.738995e-03	ci left: 8.095414e-01	ci right 8.109512e-01	k: 964194	n:1190000
KS ci ratio: 1.229894e-01	ci left: 8.004747e-04	ci right 9.061808e-04	k: 1014	n:1190000
POTEE   1190000 perm   768 sec   (1549 perm/sec)   p_kst 8.521008e-04   p_cons 8.102471e-01   p_joint 8.521008e-04

Joint ci ratio: 1.223879e-01	ci left: 8.018817e-04	ci right 9.072182e-04	k: 1024	n:1200000
Cons ci ratio: 1.731774e-03	ci left: 8.095373e-01	ci right 8.109412e-01	k: 972288	n:1200000
KS ci ratio: 1.223879e-01	ci left: 8.018817e-04	ci right 9.072182e-04	k: 1024	n:1200000
POTEE   1200000 perm   779 sec   (1541 perm/sec)   p_kst 8.533333e-04   p_cons 8.102400e-01   p_joint 8.533333e-04

Joint ci ratio: 1.217951e-01	ci left: 8.032666e-04	ci right 9.082372e-04	k: 1034	n:1210000
Cons ci ratio: 1.724836e-03	ci left: 8.094985e-01	ci right 8.108967e-01	k: 980340	n:1210000
KS ci ratio: 1.217951e-01	ci left: 8.032666e-04	ci right 9.082372e-04	k: 1034	n:1210000
POTEE   1210000 perm   790 sec   (1532 perm/sec)   p_kst 8.545455e-04   p_cons 8.101983e-01   p_joint 8.545455e-04

Joint ci ratio: 1.212690e-01	ci left: 8.038353e-04	ci right 9.083938e-04	k: 1043	n:1220000
Cons ci ratio: 1.717817e-03	ci left: 8.094899e-01	ci right 8.108824e-01	k: 988428	n:1220000
KS ci ratio: 1.212690e-01	ci left: 8.038353e-04	ci right 9.083938e-04	k: 1043	n:1220000
POTEE   1220000 perm   801 sec   (1524 perm/sec)   p_kst 8.549180e-04   p_cons 8.101869e-01   p_joint 8.549180e-04

Joint ci ratio: 1.206923e-01	ci left: 8.051841e-04	ci right 9.093845e-04	k: 1053	n:1230000
Cons ci ratio: 1.710878e-03	ci left: 8.094822e-01	ci right 8.108691e-01	k: 996517	n:1230000
KS ci ratio: 1.206923e-01	ci left: 8.051841e-04	ci right 9.093845e-04	k: 1053	n:1230000
POTEE   1230000 perm   812 sec   (1515 perm/sec)   p_kst 8.560976e-04   p_cons 8.101764e-01   p_joint 8.560976e-04

Joint ci ratio: 1.200109e-01	ci left: 8.080768e-04	ci right 9.120193e-04	k: 1065	n:1240000
Cons ci ratio: 1.704143e-03	ci left: 8.094529e-01	ci right 8.108343e-01	k: 1004579	n:1240000
KS ci ratio: 1.200109e-01	ci left: 8.080768e-04	ci right 9.120193e-04	k: 1065	n:1240000
POTEE   1240000 perm   823 sec   (1507 perm/sec)   p_kst 8.588710e-04   p_cons 8.101444e-01   p_joint 8.588710e-04

Joint ci ratio: 1.195074e-01	ci left: 8.085966e-04	ci right 9.121387e-04	k: 1074	n:1250000
Cons ci ratio: 1.697526e-03	ci left: 8.094169e-01	ci right 8.107929e-01	k: 1012632	n:1250000
KS ci ratio: 1.195074e-01	ci left: 8.085966e-04	ci right 9.121387e-04	k: 1074	n:1250000
POTEE   1250000 perm   834 sec   (1498 perm/sec)   p_kst 8.592000e-04   p_cons 8.101056e-01   p_joint 8.592000e-04

Joint ci ratio: 1.189005e-01	ci left: 8.106490e-04	ci right 9.138898e-04	k: 1085	n:1260000
Cons ci ratio: 1.690489e-03	ci left: 8.094721e-01	ci right 8.108424e-01	k: 1020799	n:1260000
KS ci ratio: 1.189005e-01	ci left: 8.106490e-04	ci right 9.138898e-04	k: 1085	n:1260000
POTEE   1260000 perm   846 sec   (1490 perm/sec)   p_kst 8.611111e-04   p_cons 8.101579e-01   p_joint 8.611111e-04

Joint ci ratio: 1.186279e-01	ci left: 8.080860e-04	ci right 9.107478e-04	k: 1090	n:1270000
Cons ci ratio: 1.683892e-03	ci left: 8.094617e-01	ci right 8.108267e-01	k: 1028884	n:1270000
KS ci ratio: 1.186279e-01	ci left: 8.080860e-04	ci right 9.107478e-04	k: 1090	n:1270000
POTEE   1270000 perm   857 sec   (1482 perm/sec)   p_kst 8.582677e-04   p_cons 8.101449e-01   p_joint 8.582677e-04

Joint ci ratio: 1.180879e-01	ci left: 8.093540e-04	ci right 9.116762e-04	k: 1100	n:1280000
Cons ci ratio: 1.677324e-03	ci left: 8.094601e-01	ci right 8.108197e-01	k: 1036980	n:1280000
KS ci ratio: 1.180879e-01	ci left: 8.093540e-04	ci right 9.116762e-04	k: 1100	n:1280000
POTEE   1280000 perm   869 sec   (1474 perm/sec)   p_kst 8.593750e-04   p_cons 8.101406e-01   p_joint 8.593750e-04

Joint ci ratio: 1.175552e-01	ci left: 8.106035e-04	ci right 9.125892e-04	k: 1110	n:1290000
Cons ci ratio: 1.671225e-03	ci left: 8.093864e-01	ci right 8.107409e-01	k: 1044983	n:1290000
KS ci ratio: 1.175552e-01	ci left: 8.106035e-04	ci right 9.125892e-04	k: 1110	n:1290000
POTEE   1290000 perm   880 sec   (1466 perm/sec)   p_kst 8.604651e-04   p_cons 8.100643e-01   p_joint 8.604651e-04

Joint ci ratio: 1.169774e-01	ci left: 8.125814e-04	ci right 9.142789e-04	k: 1121	n:1300000
Cons ci ratio: 1.664875e-03	ci left: 8.093723e-01	ci right 8.107217e-01	k: 1053062	n:1300000
KS ci ratio: 1.169774e-01	ci left: 8.125814e-04	ci right 9.142789e-04	k: 1121	n:1300000
POTEE   1300000 perm   892 sec   (1458 perm/sec)   p_kst 8.623077e-04   p_cons 8.100477e-01   p_joint 8.623077e-04

Joint ci ratio: 1.167178e-01	ci left: 8.100837e-04	ci right 9.112280e-04	k: 1126	n:1310000
Cons ci ratio: 1.658679e-03	ci left: 8.093432e-01	ci right 8.106875e-01	k: 1061121	n:1310000
KS ci ratio: 1.167178e-01	ci left: 8.100837e-04	ci right 9.112280e-04	k: 1126	n:1310000
POTEE   1310000 perm   904 sec   (1450 perm/sec)   p_kst 8.595420e-04   p_cons 8.100160e-01   p_joint 8.595420e-04

Joint ci ratio: 1.159993e-01	ci left: 8.142442e-04	ci right 9.152393e-04	k: 1140	n:1320000
Cons ci ratio: 1.652454e-03	ci left: 8.093327e-01	ci right 8.106720e-01	k: 1069204	n:1320000
KS ci ratio: 1.159993e-01	ci left: 8.142442e-04	ci right 9.152393e-04	k: 1140	n:1320000
POTEE   1320000 perm   916 sec   (1441 perm/sec)   p_kst 8.636364e-04   p_cons 8.100030e-01   p_joint 8.636364e-04

Joint ci ratio: 1.154440e-01	ci left: 8.161534e-04	ci right 9.168677e-04	k: 1151	n:1330000
Cons ci ratio: 1.646041e-03	ci left: 8.093706e-01	ci right 8.107047e-01	k: 1077351	n:1330000
KS ci ratio: 1.154440e-01	ci left: 8.161534e-04	ci right 9.168677e-04	k: 1151	n:1330000
POTEE   1330000 perm   928 sec   (1433 perm/sec)   p_kst 8.654135e-04   p_cons 8.100383e-01   p_joint 8.654135e-04

Joint ci ratio: 1.149957e-01	ci left: 8.165856e-04	ci right 9.169353e-04	k: 1160	n:1340000
Cons ci ratio: 1.639774e-03	ci left: 8.093945e-01	ci right 8.107235e-01	k: 1085480	n:1340000
KS ci ratio: 1.149957e-01	ci left: 8.165856e-04	ci right 9.169353e-04	k: 1160	n:1340000
POTEE   1340000 perm   940 sec   (1426 perm/sec)   p_kst 8.656716e-04   p_cons 8.100597e-01   p_joint 8.656716e-04

Joint ci ratio: 1.145525e-01	ci left: 8.170121e-04	ci right 9.170011e-04	k: 1169	n:1350000
Cons ci ratio: 1.633778e-03	ci left: 8.093802e-01	ci right 8.107044e-01	k: 1093558	n:1350000
KS ci ratio: 1.145525e-01	ci left: 8.170121e-04	ci right 9.170011e-04	k: 1169	n:1350000
POTEE   1350000 perm   952 sec   (1418 perm/sec)   p_kst 8.659259e-04   p_cons 8.100430e-01   p_joint 8.659259e-04

Joint ci ratio: 1.140177e-01	ci left: 8.188617e-04	ci right 9.185778e-04	k: 1180	n:1360000
Cons ci ratio: 1.627762e-03	ci left: 8.093824e-01	ci right 8.107016e-01	k: 1101658	n:1360000
KS ci ratio: 1.140177e-01	ci left: 8.188617e-04	ci right 9.185778e-04	k: 1180	n:1360000
POTEE   1360000 perm   965 sec   (1410 perm/sec)   p_kst 8.676471e-04   p_cons 8.100426e-01   p_joint 8.676471e-04

Joint ci ratio: 1.135380e-01	ci left: 8.199762e-04	ci right 9.193797e-04	k: 1190	n:1370000
Cons ci ratio: 1.621874e-03	ci left: 8.093728e-01	ci right 8.106872e-01	k: 1109742	n:1370000
KS ci ratio: 1.135380e-01	ci left: 8.199762e-04	ci right 9.193797e-04	k: 1190	n:1370000
POTEE   1370000 perm   977 sec   (1403 perm/sec)   p_kst 8.686131e-04   p_cons 8.100307e-01   p_joint 8.686131e-04

Joint ci ratio: 1.131114e-01	ci left: 8.203712e-04	ci right 9.194240e-04	k: 1199	n:1380000
Cons ci ratio: 1.616197e-03	ci left: 8.093350e-01	ci right 8.106448e-01	k: 1117787	n:1380000
KS ci ratio: 1.131114e-01	ci left: 8.203712e-04	ci right 9.194240e-04	k: 1199	n:1380000
POTEE   1380000 perm   989 sec   (1395 perm/sec)   p_kst 8.688406e-04   p_cons 8.099906e-01   p_joint 8.688406e-04

Joint ci ratio: 1.128298e-01	ci left: 8.186638e-04	ci right 9.172480e-04	k: 1205	n:1390000
Cons ci ratio: 1.610448e-03	ci left: 8.093231e-01	ci right 8.106282e-01	k: 1125867	n:1390000
KS ci ratio: 1.128298e-01	ci left: 8.186638e-04	ci right 9.172480e-04	k: 1205	n:1390000
POTEE   1390000 perm   1001 sec   (1388 perm/sec)   p_kst 8.669065e-04   p_cons 8.099763e-01   p_joint 8.669065e-04

Joint ci ratio: 1.125038e-01	ci left: 8.176753e-04	ci right 9.158371e-04	k: 1212	n:1400000
Cons ci ratio: 1.604759e-03	ci left: 8.093113e-01	ci right 8.106117e-01	k: 1133947	n:1400000
KS ci ratio: 1.125038e-01	ci left: 8.176753e-04	ci right 9.158371e-04	k: 1212	n:1400000
POTEE   1400000 perm   1014 sec   (1381 perm/sec)   p_kst 8.657143e-04   p_cons 8.099621e-01   p_joint 8.657143e-04

Joint ci ratio: 1.119056e-01	ci left: 8.208373e-04	ci right 9.188202e-04	k: 1225	n:1410000
Cons ci ratio: 1.599065e-03	ci left: 8.093124e-01	ci right 8.106083e-01	k: 1142045	n:1410000
KS ci ratio: 1.119056e-01	ci left: 8.208373e-04	ci right 9.188202e-04	k: 1225	n:1410000
POTEE   1410000 perm   1026 sec   (1374 perm/sec)   p_kst 8.687943e-04   p_cons 8.099610e-01   p_joint 8.687943e-04

Joint ci ratio: 1.114971e-01	ci left: 8.212177e-04	ci right 9.188647e-04	k: 1234	n:1420000
Cons ci ratio: 1.593346e-03	ci left: 8.093298e-01	ci right 8.106210e-01	k: 1150166	n:1420000
KS ci ratio: 1.114971e-01	ci left: 8.212177e-04	ci right 9.188647e-04	k: 1234	n:1420000
POTEE   1420000 perm   1039 sec   (1367 perm/sec)   p_kst 8.690141e-04   p_cons 8.099761e-01   p_joint 8.690141e-04

Joint ci ratio: 1.110483e-01	ci left: 8.222734e-04	ci right 9.196266e-04	k: 1244	n:1430000
Cons ci ratio: 1.587822e-03	ci left: 8.093210e-01	ci right 8.106078e-01	k: 1158250	n:1430000
KS ci ratio: 1.110483e-01	ci left: 8.222734e-04	ci right 9.196266e-04	k: 1244	n:1430000
POTEE   1430000 perm   1052 sec   (1359 perm/sec)   p_kst 8.699301e-04   p_cons 8.099650e-01   p_joint 8.699301e-04

Joint ci ratio: 1.106050e-01	ci left: 8.233151e-04	ci right 9.203771e-04	k: 1254	n:1440000
Cons ci ratio: 1.582509e-03	ci left: 8.092825e-01	ci right 8.105649e-01	k: 1166291	n:1440000
KS ci ratio: 1.106050e-01	ci left: 8.233151e-04	ci right 9.203771e-04	k: 1254	n:1440000
POTEE   1440000 perm   1065 sec   (1352 perm/sec)   p_kst 8.708333e-04   p_cons 8.099243e-01   p_joint 8.708333e-04

Joint ci ratio: 1.102105e-01	ci left: 8.236726e-04	ci right 9.204079e-04	k: 1263	n:1450000
Cons ci ratio: 1.577184e-03	ci left: 8.092569e-01	ci right 8.105349e-01	k: 1174350	n:1450000
KS ci ratio: 1.102105e-01	ci left: 8.236726e-04	ci right 9.204079e-04	k: 1263	n:1450000
POTEE   1450000 perm   1078 sec   (1345 perm/sec)   p_kst 8.710345e-04   p_cons 8.098966e-01   p_joint 8.710345e-04

Joint ci ratio: 1.096909e-01	ci left: 8.260242e-04	ci right 9.225488e-04	k: 1275	n:1460000
Cons ci ratio: 1.571994e-03	ci left: 8.092159e-01	ci right 8.104897e-01	k: 1182386	n:1460000
KS ci ratio: 1.096909e-01	ci left: 8.260242e-04	ci right 9.225488e-04	k: 1275	n:1460000
POTEE   1460000 perm   1091 sec   (1339 perm/sec)   p_kst 8.732877e-04   p_cons 8.098534e-01   p_joint 8.732877e-04

Joint ci ratio: 1.093487e-01	ci left: 8.256981e-04	ci right 9.218642e-04	k: 1283	n:1470000
Cons ci ratio: 1.566608e-03	ci left: 8.092239e-01	ci right 8.104933e-01	k: 1190493	n:1470000
KS ci ratio: 1.093487e-01	ci left: 8.256981e-04	ci right 9.218642e-04	k: 1283	n:1470000
POTEE   1470000 perm   1103 sec   (1332 perm/sec)   p_kst 8.727891e-04   p_cons 8.098592e-01   p_joint 8.727891e-04

Joint ci ratio: 1.090519e-01	ci left: 8.247195e-04	ci right 9.204942e-04	k: 1290	n:1480000
Cons ci ratio: 1.561134e-03	ci left: 8.092601e-01	ci right 8.105251e-01	k: 1198642	n:1480000
KS ci ratio: 1.090519e-01	ci left: 8.247195e-04	ci right 9.204942e-04	k: 1290	n:1480000
POTEE   1480000 perm   1116 sec   (1326 perm/sec)   p_kst 8.716216e-04   p_cons 8.098932e-01   p_joint 8.716216e-04

Joint ci ratio: 1.086738e-01	ci left: 8.250603e-04	ci right 9.205211e-04	k: 1299	n:1490000
Cons ci ratio: 1.555985e-03	ci left: 8.092428e-01	ci right 8.105036e-01	k: 1206712	n:1490000
KS ci ratio: 1.086738e-01	ci left: 8.250603e-04	ci right 9.205211e-04	k: 1299	n:1490000
POTEE   1490000 perm   1129 sec   (1319 perm/sec)   p_kst 8.718121e-04   p_cons 8.098738e-01   p_joint 8.718121e-04

Joint ci ratio: 1.082995e-01	ci left: 8.253971e-04	ci right 9.205470e-04	k: 1308	n:1500000
Cons ci ratio: 1.550859e-03	ci left: 8.092311e-01	ci right 8.104877e-01	k: 1214790	n:1500000
KS ci ratio: 1.082995e-01	ci left: 8.253971e-04	ci right 9.205470e-04	k: 1308	n:1500000
POTEE   1500000 perm   1142 sec   (1313 perm/sec)   p_kst 8.720000e-04   p_cons 8.098600e-01   p_joint 8.720000e-04

Joint ci ratio: 1.079291e-01	ci left: 8.257300e-04	ci right 9.205720e-04	k: 1317	n:1510000
Cons ci ratio: 1.545970e-03	ci left: 8.091824e-01	ci right 8.104350e-01	k: 1222812	n:1510000
KS ci ratio: 1.079291e-01	ci left: 8.257300e-04	ci right 9.205720e-04	k: 1317	n:1510000
POTEE   1510000 perm   1156 sec   (1306 perm/sec)   p_kst 8.721854e-04   p_cons 8.098093e-01   p_joint 8.721854e-04

Joint ci ratio: 1.076844e-01	ci left: 8.241385e-04	ci right 9.185694e-04	k: 1323	n:1520000
Cons ci ratio: 1.540830e-03	ci left: 8.091936e-01	ci right 8.104420e-01	k: 1230924	n:1520000
KS ci ratio: 1.076844e-01	ci left: 8.241385e-04	ci right 9.185694e-04	k: 1323	n:1520000
POTEE   1520000 perm   1169 sec   (1300 perm/sec)   p_kst 8.703947e-04   p_cons 8.098184e-01   p_joint 8.703947e-04

Joint ci ratio: 1.072397e-01	ci left: 8.257483e-04	ci right 9.199484e-04	k: 1334	n:1530000
Cons ci ratio: 1.535628e-03	ci left: 8.092276e-01	ci right 8.104719e-01	k: 1239071	n:1530000
KS ci ratio: 1.072397e-01	ci left: 8.257483e-04	ci right 9.199484e-04	k: 1334	n:1530000
POTEE   1530000 perm   1183 sec   (1294 perm/sec)   p_kst 8.718954e-04   p_cons 8.098503e-01   p_joint 8.718954e-04

Joint ci ratio: 1.069597e-01	ci left: 8.248100e-04	ci right 9.186419e-04	k: 1341	n:1540000
Cons ci ratio: 1.530464e-03	ci left: 8.092638e-01	ci right 8.105039e-01	k: 1247222	n:1540000
KS ci ratio: 1.069597e-01	ci left: 8.248100e-04	ci right 9.186419e-04	k: 1341	n:1540000
POTEE   1540000 perm   1196 sec   (1287 perm/sec)   p_kst 8.707792e-04   p_cons 8.098844e-01   p_joint 8.707792e-04

Joint ci ratio: 1.067215e-01	ci left: 8.232561e-04	ci right 9.166896e-04	k: 1347	n:1550000
Cons ci ratio: 1.525432e-03	ci left: 8.092833e-01	ci right 8.105194e-01	k: 1255348	n:1550000
KS ci ratio: 1.067215e-01	ci left: 8.232561e-04	ci right 9.166896e-04	k: 1347	n:1550000
POTEE   1550000 perm   1210 sec   (1281 perm/sec)   p_kst 8.690323e-04   p_cons 8.099019e-01   p_joint 8.690323e-04

Joint ci ratio: 1.062495e-01	ci left: 8.254663e-04	ci right 9.187104e-04	k: 1359	n:1560000
Cons ci ratio: 1.520738e-03	ci left: 8.092442e-01	ci right 8.104764e-01	k: 1263383	n:1560000
KS ci ratio: 1.062495e-01	ci left: 8.254663e-04	ci right 9.187104e-04	k: 1359	n:1560000
POTEE   1560000 perm   1223 sec   (1275 perm/sec)   p_kst 8.711538e-04   p_cons 8.098609e-01   p_joint 8.711538e-04

Joint ci ratio: 1.058224e-01	ci left: 8.270292e-04	ci right 9.200508e-04	k: 1370	n:1570000
Cons ci ratio: 1.515946e-03	ci left: 8.092343e-01	ci right 8.104626e-01	k: 1271463	n:1570000
KS ci ratio: 1.058224e-01	ci left: 8.270292e-04	ci right 9.200508e-04	k: 1370	n:1570000
POTEE   1570000 perm   1237 sec   (1269 perm/sec)   p_kst 8.726115e-04   p_cons 8.098490e-01   p_joint 8.726115e-04

Joint ci ratio: 1.055917e-01	ci left: 8.254918e-04	ci right 9.181256e-04	k: 1376	n:1580000
Cons ci ratio: 1.511186e-03	ci left: 8.092271e-01	ci right 8.104515e-01	k: 1279547	n:1580000
KS ci ratio: 1.055917e-01	ci left: 8.254918e-04	ci right 9.181256e-04	k: 1376	n:1580000
POTEE   1580000 perm   1251 sec   (1263 perm/sec)   p_kst 8.708861e-04   p_cons 8.098399e-01   p_joint 8.708861e-04

Joint ci ratio: 1.054006e-01	ci left: 8.233617e-04	ci right 9.155789e-04	k: 1381	n:1590000
Cons ci ratio: 1.506704e-03	ci left: 8.091721e-01	ci right 8.103928e-01	k: 1287555	n:1590000
KS ci ratio: 1.054006e-01	ci left: 8.233617e-04	ci right 9.155789e-04	k: 1381	n:1590000
POTEE   1590000 perm   1264 sec   (1257 perm/sec)   p_kst 8.685535e-04   p_cons 8.097830e-01   p_joint 8.685535e-04

Joint ci ratio: 1.051347e-01	ci left: 8.224755e-04	ci right 9.143467e-04	k: 1388	n:1600000
Cons ci ratio: 1.502043e-03	ci left: 8.091629e-01	ci right 8.103798e-01	k: 1295635	n:1600000
KS ci ratio: 1.051347e-01	ci left: 8.224755e-04	ci right 9.143467e-04	k: 1388	n:1600000
POTEE   1600000 perm   1278 sec   (1252 perm/sec)   p_kst 8.675000e-04   p_cons 8.097719e-01   p_joint 8.675000e-04

Joint ci ratio: 1.045714e-01	ci left: 8.264395e-04	ci right 9.182284e-04	k: 1403	n:1610000
Cons ci ratio: 1.497195e-03	ci left: 8.092010e-01	ci right 8.104140e-01	k: 1303791	n:1610000
KS ci ratio: 1.045714e-01	ci left: 8.264395e-04	ci right 9.182284e-04	k: 1403	n:1610000
POTEE   1610000 perm   1292 sec   (1246 perm/sec)   p_kst 8.714286e-04   p_cons 8.098081e-01   p_joint 8.714286e-04

Joint ci ratio: 1.043117e-01	ci left: 8.255461e-04	ci right 9.169942e-04	k: 1410	n:1620000
Cons ci ratio: 1.492537e-03	ci left: 8.092090e-01	ci right 8.104183e-01	k: 1311899	n:1620000
KS ci ratio: 1.043117e-01	ci left: 8.255461e-04	ci right 9.169942e-04	k: 1410	n:1620000
POTEE   1620000 perm   1307 sec   (1240 perm/sec)   p_kst 8.703704e-04   p_cons 8.098142e-01   p_joint 8.703704e-04

Joint ci ratio: 1.039806e-01	ci left: 8.258591e-04	ci right 9.170337e-04	k: 1419	n:1630000
Cons ci ratio: 1.487940e-03	ci left: 8.092132e-01	ci right 8.104188e-01	k: 1320001	n:1630000
KS ci ratio: 1.039806e-01	ci left: 8.258591e-04	ci right 9.170337e-04	k: 1419	n:1630000
POTEE   1630000 perm   1321 sec   (1234 perm/sec)   p_kst 8.705521e-04   p_cons 8.098166e-01   p_joint 8.705521e-04

Joint ci ratio: 1.035078e-01	ci left: 8.285445e-04	ci right 9.195744e-04	k: 1432	n:1640000
Cons ci ratio: 1.483374e-03	ci left: 8.092199e-01	ci right 8.104217e-01	k: 1328107	n:1640000
KS ci ratio: 1.035078e-01	ci left: 8.285445e-04	ci right 9.195744e-04	k: 1432	n:1640000
POTEE   1640000 perm   1335 sec   (1228 perm/sec)   p_kst 8.731707e-04   p_cons 8.098213e-01   p_joint 8.731707e-04

Joint ci ratio: 1.032560e-01	ci left: 8.276558e-04	ci right 9.183533e-04	k: 1439	n:1650000
Cons ci ratio: 1.478677e-03	ci left: 8.092622e-01	ci right 8.104603e-01	k: 1336272	n:1650000
KS ci ratio: 1.032560e-01	ci left: 8.276558e-04	ci right 9.183533e-04	k: 1439	n:1650000
POTEE   1650000 perm   1350 sec   (1222 perm/sec)   p_kst 8.721212e-04   p_cons 8.098618e-01   p_joint 8.721212e-04

Joint ci ratio: 1.030773e-01	ci left: 8.256042e-04	ci right 9.159108e-04	k: 1444	n:1660000
Cons ci ratio: 1.474236e-03	ci left: 8.092600e-01	ci right 8.104545e-01	k: 1344364	n:1660000
KS ci ratio: 1.030773e-01	ci left: 8.256042e-04	ci right 9.159108e-04	k: 1444	n:1660000
POTEE   1660000 perm   1365 sec   (1216 perm/sec)   p_kst 8.698795e-04   p_cons 8.098578e-01   p_joint 8.698795e-04

Joint ci ratio: 1.028640e-01	ci left: 8.241607e-04	ci right 9.141117e-04	k: 1450	n:1670000
Cons ci ratio: 1.469663e-03	ci left: 8.092939e-01	ci right 8.104847e-01	k: 1352516	n:1670000
KS ci ratio: 1.028640e-01	ci left: 8.241607e-04	ci right 9.141117e-04	k: 1450	n:1670000
POTEE   1670000 perm   1379 sec   (1211 perm/sec)   p_kst 8.682635e-04   p_cons 8.098898e-01   p_joint 8.682635e-04

Joint ci ratio: 1.026168e-01	ci left: 8.233146e-04	ci right 9.129443e-04	k: 1457	n:1680000
Cons ci ratio: 1.465191e-03	ci left: 8.093148e-01	ci right 8.105020e-01	k: 1360647	n:1680000
KS ci ratio: 1.026168e-01	ci left: 8.233146e-04	ci right 9.129443e-04	k: 1457	n:1680000
POTEE   1680000 perm   1394 sec   (1205 perm/sec)   p_kst 8.672619e-04   p_cons 8.099089e-01   p_joint 8.672619e-04

Joint ci ratio: 1.024064e-01	ci left: 8.219021e-04	ci right 9.111835e-04	k: 1463	n:1690000
Cons ci ratio: 1.460800e-03	ci left: 8.093271e-01	ci right 8.105108e-01	k: 1368764	n:1690000
KS ci ratio: 1.024064e-01	ci left: 8.219021e-04	ci right 9.111835e-04	k: 1463	n:1690000
POTEE   1690000 perm   1409 sec   (1200 perm/sec)   p_kst 8.656805e-04   p_cons 8.099195e-01   p_joint 8.656805e-04

Joint ci ratio: 1.022321e-01	ci left: 8.199333e-04	ci right 9.088401e-04	k: 1468	n:1700000
Cons ci ratio: 1.456367e-03	ci left: 8.093565e-01	ci right 8.105366e-01	k: 1376910	n:1700000
KS ci ratio: 1.022321e-01	ci left: 8.199333e-04	ci right 9.088401e-04	k: 1468	n:1700000
POTEE   1700000 perm   1423 sec   (1194 perm/sec)   p_kst 8.635294e-04   p_cons 8.099471e-01   p_joint 8.635294e-04

Joint ci ratio: 1.019204e-01	ci left: 8.202671e-04	ci right 9.089227e-04	k: 1477	n:1710000
Cons ci ratio: 1.452219e-03	ci left: 8.093333e-01	ci right 8.105101e-01	k: 1384967	n:1710000
KS ci ratio: 1.019204e-01	ci left: 8.202671e-04	ci right 9.089227e-04	k: 1477	n:1710000
POTEE   1710000 perm   1438 sec   (1189 perm/sec)   p_kst 8.637427e-04   p_cons 8.099222e-01   p_joint 8.637427e-04

Joint ci ratio: 1.017485e-01	ci left: 8.183310e-04	ci right 9.066193e-04	k: 1482	n:1720000
Cons ci ratio: 1.448140e-03	ci left: 8.093035e-01	ci right 8.104769e-01	k: 1393012	n:1720000
KS ci ratio: 1.017485e-01	ci left: 8.183310e-04	ci right 9.066193e-04	k: 1482	n:1720000
POTEE   1720000 perm   1453 sec   (1183 perm/sec)   p_kst 8.616279e-04   p_cons 8.098907e-01   p_joint 8.616279e-04

Joint ci ratio: 1.013392e-01	ci left: 8.203611e-04	ci right 9.084912e-04	k: 1494	n:1730000
Cons ci ratio: 1.443997e-03	ci left: 8.092948e-01	ci right 8.104648e-01	k: 1401093	n:1730000
KS ci ratio: 1.013392e-01	ci left: 8.203611e-04	ci right 9.084912e-04	k: 1494	n:1730000
POTEE   1730000 perm   1469 sec   (1178 perm/sec)   p_kst 8.635838e-04   p_cons 8.098803e-01   p_joint 8.635838e-04

Joint ci ratio: 1.011366e-01	ci left: 8.190073e-04	ci right 9.068056e-04	k: 1500	n:1740000
Cons ci ratio: 1.439795e-03	ci left: 8.093064e-01	ci right 8.104730e-01	k: 1409209	n:1740000
KS ci ratio: 1.011366e-01	ci left: 8.190073e-04	ci right 9.068056e-04	k: 1500	n:1740000
POTEE   1740000 perm   1483 sec   (1173 perm/sec)   p_kst 8.620690e-04   p_cons 8.098902e-01   p_joint 8.620690e-04

Joint ci ratio: 1.008347e-01	ci left: 8.193403e-04	ci right 9.068965e-04	k: 1509	n:1750000
Cons ci ratio: 1.435721e-03	ci left: 8.092984e-01	ci right 8.104617e-01	k: 1417291	n:1750000
KS ci ratio: 1.008347e-01	ci left: 8.193403e-04	ci right 9.068965e-04	k: 1509	n:1750000
POTEE   1750000 perm   1498 sec   (1168 perm/sec)   p_kst 8.622857e-04   p_cons 8.098806e-01   p_joint 8.622857e-04

Joint ci ratio: 1.004694e-01	ci left: 8.207776e-04	ci right 9.081510e-04	k: 1520	n:1760000
Cons ci ratio: 1.431422e-03	ci left: 8.093462e-01	ci right 8.105061e-01	k: 1425471	n:1760000
KS ci ratio: 1.004694e-01	ci left: 8.207776e-04	ci right 9.081510e-04	k: 1520	n:1760000
POTEE   1760000 perm   1513 sec   (1163 perm/sec)   p_kst 8.636364e-04   p_cons 8.099267e-01   p_joint 8.636364e-04

Joint ci ratio: 1.002390e-01	ci left: 8.199960e-04	ci right 9.070742e-04	k: 1527	n:1770000
Cons ci ratio: 1.427156e-03	ci left: 8.093947e-01	ci right 8.105512e-01	k: 1433653	n:1770000
KS ci ratio: 1.002390e-01	ci left: 8.199960e-04	ci right 9.070742e-04	k: 1527	n:1770000
POTEE   1770000 perm   1528 sec   (1159 perm/sec)   p_kst 8.627119e-04   p_cons 8.099734e-01   p_joint 8.627119e-04

Joint ci ratio: 1.000102e-01	ci left: 8.192234e-04	ci right 9.060093e-04	k: 1534	n:1780000
Cons ci ratio: 1.423216e-03	ci left: 8.093802e-01	ci right 8.105334e-01	k: 1441724	n:1780000
KS ci ratio: 1.000102e-01	ci left: 8.192234e-04	ci right 9.060093e-04	k: 1534	n:1780000
POTEE   1780000 perm   1543 sec   (1154 perm/sec)   p_kst 8.617978e-04   p_cons 8.099573e-01   p_joint 8.617978e-04

Joint ci ratio: 9.968601e-02	ci left: 8.200938e-04	ci right 9.066739e-04	k: 1544	n:1790000
Cons ci ratio: 1.419337e-03	ci left: 8.093596e-01	ci right 8.105097e-01	k: 1449784	n:1790000
KS ci ratio: 9.968601e-02	ci left: 8.200938e-04	ci right 9.066739e-04	k: 1544	n:1790000
POTEE   1790000 perm   1558 sec   (1149 perm/sec)   p_kst 8.625698e-04   p_cons 8.099352e-01   p_joint 8.625698e-04

Outputting figure to mutsig2_images.part000000000135/POTEE.2_3288_1790000_0.00086257_0.80994_0.00086257.png
                gene_name: POTEE
               theta_stop: 0.100 
                    nperm: 1790000 
                     p_ks: 0.00086 
        ci_ks_bounds_left: 0.00082 
       ci_ks_bounds_right: 0.00091 
                   p_cons: 0.81 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.81 
                  p_joint: 0.00086 
     ci_joint_bounds_left: 0.00082 
    ci_joint_bounds_right: 0.00091 

Current progress: 33 percent done.
POTEH
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.895871e-02	ci left: 6.374410e-01	ci right 6.562734e-01	k: 6469	n:10000
Cons ci ratio: 8.596651e-03	ci left: 9.499134e-01	ci right 9.582103e-01	k: 9541	n:9999
KS ci ratio: 1.459254e-01	ci left: 6.236946e-02	ci right 7.228440e-02	k: 672	n:10000
POTEH   10000 perm   2 sec   (6524 perm/sec)   p_kst 6.720000e-02   p_cons 9.541954e-01   p_joint 6.469000e-01

Joint ci ratio: 5.763293e-03	ci left: 9.557466e-01	ci right 9.613191e-01	k: 19172	n:20000
Cons ci ratio: 5.943521e-03	ci left: 9.531593e-01	ci right 9.588896e-01	k: 19118	n:19996
KS ci ratio: 1.013818e-01	ci left: 6.601338e-02	ci right 7.311238e-02	k: 1390	n:20000
POTEH   20000 perm   3 sec   (5717 perm/sec)   p_kst 6.950000e-02   p_cons 9.560912e-01   p_joint 9.586000e-01

Joint ci ratio: 4.292777e-03	ci left: 9.631667e-01	ci right 9.673425e-01	k: 28959	n:30000
Cons ci ratio: 4.929129e-03	ci left: 9.523397e-01	ci right 9.570779e-01	k: 28634	n:29991
KS ci ratio: 8.266141e-02	ci left: 6.684362e-02	ci right 7.264003e-02	k: 2091	n:30000
POTEH   30000 perm   6 sec   (5438 perm/sec)   p_kst 6.970000e-02   p_cons 9.547531e-01   p_joint 9.653000e-01

Outputting figure to mutsig2_images.part000000000135/POTEH.2_1678_30000_0.0697_0.95475_0.9653.png
                gene_name: POTEH
               theta_stop: 0.083 
                    nperm: 30000 
                     p_ks: 0.070 
        ci_ks_bounds_left: 0.067 
       ci_ks_bounds_right: 0.073 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.95 
     ci_cons_bounds_right: 0.96 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.96 
    ci_joint_bounds_right: 0.97 

Current progress: 50 percent done.
POU4F2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.756181e-01	ci left: 1.144300e-03	ci right 2.965502e-03	k: 19	n:10000
Cons ci ratio: 5.290849e-03	ci left: 9.794135e-01	ci right 9.847004e-01	k: 9822	n:10000
KS ci ratio: 1.181215e+00	ci left: 4.796397e-04	ci right 1.838264e-03	k: 10	n:10000
POU4F2   10000 perm   1 sec   (7079 perm/sec)   p_kst 1.000000e-03   p_cons 9.822000e-01   p_joint 1.900000e-03

Joint ci ratio: 5.772931e-01	ci left: 1.641624e-03	ci right 3.009532e-03	k: 45	n:20000
Cons ci ratio: 3.704245e-03	ci left: 9.805860e-01	ci right 9.842719e-01	k: 19650	n:20000
KS ci ratio: 8.988600e-01	ci left: 5.334815e-04	ci right 1.422016e-03	k: 18	n:20000
POU4F2   20000 perm   3 sec   (6212 perm/sec)   p_kst 9.000000e-04   p_cons 9.825000e-01   p_joint 2.250000e-03

Joint ci ratio: 4.196513e-01	ci left: 2.293583e-03	ci right 3.539117e-03	k: 86	n:30000
Cons ci ratio: 3.055186e-03	ci left: 9.805701e-01	ci right 9.836021e-01	k: 29464	n:30000
KS ci ratio: 6.819977e-01	ci left: 7.297101e-04	ci right 1.505484e-03	k: 32	n:30000
POU4F2   30000 perm   5 sec   (5867 perm/sec)   p_kst 1.066667e-03   p_cons 9.821333e-01   p_joint 2.866667e-03

Joint ci ratio: 3.784488e-01	ci left: 2.170097e-03	ci right 3.204209e-03	k: 106	n:40000
Cons ci ratio: 2.609951e-03	ci left: 9.812705e-01	ci right 9.838588e-01	k: 39304	n:40000
KS ci ratio: 5.974655e-01	ci left: 7.568492e-04	ci right 1.419033e-03	k: 42	n:40000
POU4F2   40000 perm   7 sec   (5663 perm/sec)   p_kst 1.050000e-03   p_cons 9.826000e-01   p_joint 2.650000e-03

Joint ci ratio: 3.976255e-01	ci left: 1.555474e-03	ci right 2.344151e-03	k: 96	n:50000
Cons ci ratio: 2.354471e-03	ci left: 9.811058e-01	ci right 9.834377e-01	k: 49115	n:50000
KS ci ratio: 5.282766e-01	ci left: 8.114302e-04	ci right 1.408934e-03	k: 54	n:50000
POU4F2   50000 perm   9 sec   (5500 perm/sec)   p_kst 1.080000e-03   p_cons 9.823000e-01   p_joint 1.920000e-03

Joint ci ratio: 3.878046e-01	ci left: 1.371305e-03	ci right 2.045032e-03	k: 101	n:60000
Cons ci ratio: 2.145020e-03	ci left: 9.812816e-01	ci right 9.834047e-01	k: 58942	n:60000
KS ci ratio: 4.897345e-01	ci left: 8.069402e-04	ci right 1.343209e-03	k: 63	n:60000
POU4F2   60000 perm   11 sec   (5355 perm/sec)   p_kst 1.050000e-03   p_cons 9.823667e-01   p_joint 1.683333e-03

Joint ci ratio: 4.554466e-01	ci left: 8.175199e-04	ci right 1.311060e-03	k: 73	n:70000
Cons ci ratio: 1.977307e-03	ci left: 9.815159e-01	ci right 9.834724e-01	k: 68776	n:70000
KS ci ratio: 4.554466e-01	ci left: 8.175199e-04	ci right 1.311060e-03	k: 73	n:70000
POU4F2   70000 perm   13 sec   (5232 perm/sec)   p_kst 1.042857e-03   p_cons 9.825143e-01   p_joint 1.042857e-03

Joint ci ratio: 4.300500e-01	ci left: 8.152934e-04	ci right 1.272138e-03	k: 82	n:80000
Cons ci ratio: 1.848937e-03	ci left: 9.815931e-01	ci right 9.834217e-01	k: 78602	n:80000
KS ci ratio: 4.300500e-01	ci left: 8.152934e-04	ci right 1.272138e-03	k: 82	n:80000
POU4F2   80000 perm   16 sec   (5119 perm/sec)   p_kst 1.025000e-03   p_cons 9.825250e-01   p_joint 1.025000e-03

Joint ci ratio: 4.084770e-01	ci left: 8.141593e-04	ci right 1.241277e-03	k: 91	n:90000
Cons ci ratio: 1.741016e-03	ci left: 9.816903e-01	ci right 9.834117e-01	k: 88431	n:90000
KS ci ratio: 4.084770e-01	ci left: 8.141593e-04	ci right 1.241277e-03	k: 91	n:90000
POU4F2   90000 perm   18 sec   (5013 perm/sec)   p_kst 1.011111e-03   p_cons 9.825667e-01   p_joint 1.011111e-03

Joint ci ratio: 3.957837e-01	ci left: 7.866729e-04	ci right 1.183192e-03	k: 97	n:100000
Cons ci ratio: 1.656275e-03	ci left: 9.816375e-01	ci right 9.832744e-01	k: 98247	n:100000
KS ci ratio: 3.957837e-01	ci left: 7.866729e-04	ci right 1.183192e-03	k: 97	n:100000
POU4F2   100000 perm   20 sec   (4900 perm/sec)   p_kst 9.700000e-04   p_cons 9.824700e-01   p_joint 9.700000e-04

Joint ci ratio: 3.823685e-01	ci left: 7.725682e-04	ci right 1.145462e-03	k: 104	n:110000
Cons ci ratio: 1.581947e-03	ci left: 9.816148e-01	ci right 9.831778e-01	k: 108065	n:110000
KS ci ratio: 3.823685e-01	ci left: 7.725682e-04	ci right 1.145462e-03	k: 104	n:110000
POU4F2   110000 perm   23 sec   (4761 perm/sec)   p_kst 9.454545e-04   p_cons 9.824091e-01   p_joint 9.454545e-04

Joint ci ratio: 3.591661e-01	ci left: 8.139966e-04	ci right 1.177482e-03	k: 118	n:120000
Cons ci ratio: 1.513872e-03	ci left: 9.816656e-01	ci right 9.831609e-01	k: 117891	n:120000
KS ci ratio: 3.591661e-01	ci left: 8.139966e-04	ci right 1.177482e-03	k: 118	n:120000
POU4F2   120000 perm   26 sec   (4672 perm/sec)   p_kst 9.833333e-04   p_cons 9.824250e-01   p_joint 9.833333e-04

Joint ci ratio: 3.476725e-01	ci left: 8.074574e-04	ci right 1.153886e-03	k: 126	n:130000
Cons ci ratio: 1.444140e-03	ci left: 9.819451e-01	ci right 9.833717e-01	k: 127747	n:130000
KS ci ratio: 3.476725e-01	ci left: 8.074574e-04	ci right 1.153886e-03	k: 126	n:130000
POU4F2   130000 perm   28 sec   (4588 perm/sec)   p_kst 9.692308e-04   p_cons 9.826692e-01   p_joint 9.692308e-04

Joint ci ratio: 3.372160e-01	ci left: 8.020112e-04	ci right 1.133504e-03	k: 134	n:140000
Cons ci ratio: 1.393538e-03	ci left: 9.819233e-01	ci right 9.832995e-01	k: 137567	n:140000
KS ci ratio: 3.372160e-01	ci left: 8.020112e-04	ci right 1.133504e-03	k: 134	n:140000
POU4F2   140000 perm   31 sec   (4507 perm/sec)   p_kst 9.571429e-04   p_cons 9.826214e-01   p_joint 9.571429e-04

Joint ci ratio: 3.299673e-01	ci left: 7.851927e-04	ci right 1.101277e-03	k: 140	n:150000
Cons ci ratio: 1.341589e-03	ci left: 9.820682e-01	ci right 9.833931e-01	k: 147411	n:150000
KS ci ratio: 3.299673e-01	ci left: 7.851927e-04	ci right 1.101277e-03	k: 140	n:150000
POU4F2   150000 perm   34 sec   (4428 perm/sec)   p_kst 9.333333e-04   p_cons 9.827400e-01   p_joint 9.333333e-04

Joint ci ratio: 3.265186e-01	ci left: 7.533210e-04	ci right 1.052741e-03	k: 143	n:160000
Cons ci ratio: 1.295956e-03	ci left: 9.821701e-01	ci right 9.834498e-01	k: 157251	n:160000
KS ci ratio: 3.265186e-01	ci left: 7.533210e-04	ci right 1.052741e-03	k: 143	n:160000
POU4F2   160000 perm   37 sec   (4354 perm/sec)   p_kst 8.937500e-04   p_cons 9.828187e-01   p_joint 8.937500e-04

Joint ci ratio: 3.157386e-01	ci left: 7.630922e-04	ci right 1.054362e-03	k: 153	n:170000
Cons ci ratio: 1.258166e-03	ci left: 9.821647e-01	ci right 9.834070e-01	k: 167075	n:170000
KS ci ratio: 3.157386e-01	ci left: 7.630922e-04	ci right 1.054362e-03	k: 153	n:170000
POU4F2   170000 perm   40 sec   (4283 perm/sec)   p_kst 9.000000e-04   p_cons 9.827941e-01   p_joint 9.000000e-04

Joint ci ratio: 3.088002e-01	ci left: 7.565397e-04	ci right 1.037714e-03	k: 160	n:180000
Cons ci ratio: 1.226905e-03	ci left: 9.820644e-01	ci right 9.832755e-01	k: 176882	n:180000
KS ci ratio: 3.088002e-01	ci left: 7.565397e-04	ci right 1.037714e-03	k: 160	n:180000
POU4F2   180000 perm   43 sec   (4214 perm/sec)   p_kst 8.888889e-04   p_cons 9.826778e-01   p_joint 8.888889e-04

Joint ci ratio: 3.041173e-01	ci left: 7.410133e-04	ci right 1.011432e-03	k: 165	n:190000
Cons ci ratio: 1.196712e-03	ci left: 9.820074e-01	ci right 9.831884e-01	k: 186695	n:190000
KS ci ratio: 3.041173e-01	ci left: 7.410133e-04	ci right 1.011432e-03	k: 165	n:190000
POU4F2   190000 perm   46 sec   (4147 perm/sec)   p_kst 8.684211e-04   p_cons 9.826053e-01   p_joint 8.684211e-04

Joint ci ratio: 2.987679e-01	ci left: 7.316935e-04	ci right 9.931231e-04	k: 171	n:200000
Cons ci ratio: 1.164705e-03	ci left: 9.820733e-01	ci right 9.832227e-01	k: 196531	n:200000
KS ci ratio: 2.987679e-01	ci left: 7.316935e-04	ci right 9.931231e-04	k: 171	n:200000
POU4F2   200000 perm   49 sec   (4078 perm/sec)   p_kst 8.550000e-04   p_cons 9.826550e-01   p_joint 8.550000e-04

Joint ci ratio: 2.920536e-01	ci left: 7.321236e-04	ci right 9.867415e-04	k: 179	n:210000
Cons ci ratio: 1.134650e-03	ci left: 9.821478e-01	ci right 9.832674e-01	k: 206370	n:210000
KS ci ratio: 2.920536e-01	ci left: 7.321236e-04	ci right 9.867415e-04	k: 179	n:210000
POU4F2   210000 perm   52 sec   (4015 perm/sec)   p_kst 8.523810e-04   p_cons 9.827143e-01   p_joint 8.523810e-04

Joint ci ratio: 2.857726e-01	ci left: 7.325743e-04	ci right 9.808809e-04	k: 187	n:220000
Cons ci ratio: 1.107539e-03	ci left: 9.821926e-01	ci right 9.832855e-01	k: 216204	n:220000
KS ci ratio: 2.857726e-01	ci left: 7.325743e-04	ci right 9.808809e-04	k: 187	n:220000
POU4F2   220000 perm   56 sec   (3955 perm/sec)   p_kst 8.500000e-04   p_cons 9.827455e-01   p_joint 8.500000e-04

Joint ci ratio: 2.791682e-01	ci left: 7.370825e-04	ci right 9.801284e-04	k: 196	n:230000
Cons ci ratio: 1.080890e-03	ci left: 9.822780e-01	ci right 9.833446e-01	k: 226048	n:230000
KS ci ratio: 2.791682e-01	ci left: 7.370825e-04	ci right 9.801284e-04	k: 196	n:230000
POU4F2   230000 perm   59 sec   (3899 perm/sec)   p_kst 8.521739e-04   p_cons 9.828174e-01   p_joint 8.521739e-04

Joint ci ratio: 2.743377e-01	ci left: 7.335134e-04	ci right 9.704756e-04	k: 203	n:240000
Cons ci ratio: 1.056190e-03	ci left: 9.823522e-01	ci right 9.833944e-01	k: 235891	n:240000
KS ci ratio: 2.743377e-01	ci left: 7.335134e-04	ci right 9.704756e-04	k: 203	n:240000
POU4F2   240000 perm   62 sec   (3845 perm/sec)   p_kst 8.458333e-04   p_cons 9.828792e-01   p_joint 8.458333e-04

Joint ci ratio: 2.697495e-01	ci left: 7.302631e-04	ci right 9.615620e-04	k: 210	n:250000
Cons ci ratio: 1.033713e-03	ci left: 9.824004e-01	ci right 9.834204e-01	k: 245729	n:250000
KS ci ratio: 2.697495e-01	ci left: 7.302631e-04	ci right 9.615620e-04	k: 210	n:250000
POU4F2   250000 perm   66 sec   (3792 perm/sec)   p_kst 8.400000e-04   p_cons 9.829160e-01   p_joint 8.400000e-04

Joint ci ratio: 2.635751e-01	ci left: 7.380672e-04	ci right 9.656048e-04	k: 220	n:260000
Cons ci ratio: 1.014697e-03	ci left: 9.823748e-01	ci right 9.833759e-01	k: 255549	n:260000
KS ci ratio: 2.635751e-01	ci left: 7.380672e-04	ci right 9.656048e-04	k: 220	n:260000
POU4F2   260000 perm   70 sec   (3738 perm/sec)   p_kst 8.461538e-04   p_cons 9.828808e-01   p_joint 8.461538e-04

Joint ci ratio: 2.583666e-01	ci left: 7.418846e-04	ci right 9.653503e-04	k: 229	n:270000
Cons ci ratio: 9.967995e-04	ci left: 9.823476e-01	ci right 9.833309e-01	k: 265368	n:270000
KS ci ratio: 2.583666e-01	ci left: 7.418846e-04	ci right 9.653503e-04	k: 229	n:270000
POU4F2   270000 perm   73 sec   (3686 perm/sec)   p_kst 8.481481e-04   p_cons 9.828444e-01   p_joint 8.481481e-04

Joint ci ratio: 2.524003e-01	ci left: 7.521608e-04	ci right 9.726674e-04	k: 240	n:280000
Cons ci ratio: 9.795019e-04	ci left: 9.823333e-01	ci right 9.832995e-01	k: 275190	n:280000
KS ci ratio: 2.524003e-01	ci left: 7.521608e-04	ci right 9.726674e-04	k: 240	n:280000
POU4F2   280000 perm   77 sec   (3635 perm/sec)   p_kst 8.571429e-04   p_cons 9.828214e-01   p_joint 8.571429e-04

Joint ci ratio: 2.478153e-01	ci left: 7.553138e-04	ci right 9.721026e-04	k: 249	n:290000
Cons ci ratio: 9.606149e-04	ci left: 9.824076e-01	ci right 9.833551e-01	k: 285037	n:290000
KS ci ratio: 2.478153e-01	ci left: 7.553138e-04	ci right 9.721026e-04	k: 249	n:290000
POU4F2   290000 perm   81 sec   (3586 perm/sec)   p_kst 8.586207e-04   p_cons 9.828862e-01   p_joint 8.586207e-04

Joint ci ratio: 2.420722e-01	ci left: 7.676825e-04	ci right 9.821484e-04	k: 261	n:300000
Cons ci ratio: 9.437980e-04	ci left: 9.824399e-01	ci right 9.833708e-01	k: 294873	n:300000
KS ci ratio: 2.420722e-01	ci left: 7.676825e-04	ci right 9.821484e-04	k: 261	n:300000
POU4F2   300000 perm   85 sec   (3537 perm/sec)   p_kst 8.700000e-04   p_cons 9.829100e-01   p_joint 8.700000e-04

Joint ci ratio: 2.397964e-01	ci left: 7.580734e-04	ci right 9.675678e-04	k: 266	n:310000
Cons ci ratio: 9.286351e-04	ci left: 9.824407e-01	ci right 9.833567e-01	k: 304700	n:310000
KS ci ratio: 2.397964e-01	ci left: 7.580734e-04	ci right 9.675678e-04	k: 266	n:310000
POU4F2   310000 perm   89 sec   (3490 perm/sec)   p_kst 8.580645e-04   p_cons 9.829032e-01   p_joint 8.580645e-04

Joint ci ratio: 2.354276e-01	ci left: 7.637737e-04	ci right 9.704379e-04	k: 276	n:320000
Cons ci ratio: 9.118837e-04	ci left: 9.825272e-01	ci right 9.834266e-01	k: 314554	n:320000
KS ci ratio: 2.354276e-01	ci left: 7.637737e-04	ci right 9.704379e-04	k: 276	n:320000
POU4F2   320000 perm   93 sec   (3446 perm/sec)   p_kst 8.625000e-04   p_cons 9.829813e-01   p_joint 8.625000e-04

Joint ci ratio: 2.333325e-01	ci left: 7.548904e-04	ci right 9.570709e-04	k: 281	n:330000
Cons ci ratio: 8.968857e-04	ci left: 9.825746e-01	ci right 9.834593e-01	k: 324397	n:330000
KS ci ratio: 2.333325e-01	ci left: 7.548904e-04	ci right 9.570709e-04	k: 281	n:330000
POU4F2   330000 perm   97 sec   (3405 perm/sec)   p_kst 8.515152e-04   p_cons 9.830212e-01   p_joint 8.515152e-04

Joint ci ratio: 2.300918e-01	ci left: 7.548514e-04	ci right 9.538146e-04	k: 289	n:340000
Cons ci ratio: 8.822100e-04	ci left: 9.826343e-01	ci right 9.835045e-01	k: 334245	n:340000
KS ci ratio: 2.300918e-01	ci left: 7.548514e-04	ci right 9.538146e-04	k: 289	n:340000
POU4F2   340000 perm   101 sec   (3363 perm/sec)   p_kst 8.500000e-04   p_cons 9.830735e-01   p_joint 8.500000e-04

Joint ci ratio: 2.277487e-01	ci left: 7.494438e-04	ci right 9.446874e-04	k: 295	n:350000
Cons ci ratio: 8.691206e-04	ci left: 9.826560e-01	ci right 9.835132e-01	k: 344081	n:350000
KS ci ratio: 2.277487e-01	ci left: 7.494438e-04	ci right 9.446874e-04	k: 295	n:350000
POU4F2   350000 perm   105 sec   (3322 perm/sec)   p_kst 8.428571e-04   p_cons 9.830886e-01   p_joint 8.428571e-04

Joint ci ratio: 2.262267e-01	ci left: 7.391048e-04	ci right 9.301886e-04	k: 299	n:360000
Cons ci ratio: 8.565249e-04	ci left: 9.826793e-01	ci right 9.835240e-01	k: 353918	n:360000
KS ci ratio: 2.262267e-01	ci left: 7.391048e-04	ci right 9.301886e-04	k: 299	n:360000
POU4F2   360000 perm   110 sec   (3280 perm/sec)   p_kst 8.305556e-04   p_cons 9.831056e-01   p_joint 8.305556e-04

Joint ci ratio: 2.236331e-01	ci left: 7.369819e-04	ci right 9.250316e-04	k: 306	n:370000
Cons ci ratio: 8.458347e-04	ci left: 9.826467e-01	ci right 9.834809e-01	k: 363735	n:370000
KS ci ratio: 2.236331e-01	ci left: 7.369819e-04	ci right 9.250316e-04	k: 306	n:370000
POU4F2   370000 perm   114 sec   (3241 perm/sec)   p_kst 8.270270e-04   p_cons 9.830676e-01   p_joint 8.270270e-04

Joint ci ratio: 2.204252e-01	ci left: 7.399549e-04	ci right 9.256877e-04	k: 315	n:380000
Cons ci ratio: 8.358605e-04	ci left: 9.826026e-01	ci right 9.834268e-01	k: 373547	n:380000
KS ci ratio: 2.204252e-01	ci left: 7.399549e-04	ci right 9.256877e-04	k: 315	n:380000
POU4F2   380000 perm   119 sec   (3202 perm/sec)   p_kst 8.289474e-04   p_cons 9.830184e-01   p_joint 8.289474e-04

Joint ci ratio: 2.156973e-01	ci left: 7.549194e-04	ci right 9.398060e-04	k: 329	n:390000
Cons ci ratio: 8.252116e-04	ci left: 9.826024e-01	ci right 9.834161e-01	k: 383375	n:390000
KS ci ratio: 2.156973e-01	ci left: 7.549194e-04	ci right 9.398060e-04	k: 329	n:390000
POU4F2   390000 perm   123 sec   (3162 perm/sec)   p_kst 8.435897e-04   p_cons 9.830128e-01   p_joint 8.435897e-04

Joint ci ratio: 2.128147e-01	ci left: 7.573393e-04	ci right 9.400163e-04	k: 338	n:400000
Cons ci ratio: 8.138613e-04	ci left: 9.826477e-01	ci right 9.834502e-01	k: 393221	n:400000
KS ci ratio: 2.128147e-01	ci left: 7.573393e-04	ci right 9.400163e-04	k: 338	n:400000
POU4F2   400000 perm   128 sec   (3126 perm/sec)   p_kst 8.450000e-04   p_cons 9.830525e-01   p_joint 8.450000e-04

Joint ci ratio: 2.115713e-01	ci left: 7.481048e-04	ci right 9.273634e-04	k: 342	n:410000
Cons ci ratio: 8.028448e-04	ci left: 9.826959e-01	ci right 9.834875e-01	k: 403069	n:410000
KS ci ratio: 2.115713e-01	ci left: 7.481048e-04	ci right 9.273634e-04	k: 342	n:410000
POU4F2   410000 perm   133 sec   (3089 perm/sec)   p_kst 8.341463e-04   p_cons 9.830951e-01   p_joint 8.341463e-04

Joint ci ratio: 2.091464e-01	ci left: 7.483371e-04	ci right 9.253329e-04	k: 350	n:420000
Cons ci ratio: 7.937934e-04	ci left: 9.826767e-01	ci right 9.834594e-01	k: 412890	n:420000
KS ci ratio: 2.091464e-01	ci left: 7.483371e-04	ci right 9.253329e-04	k: 350	n:420000
POU4F2   420000 perm   137 sec   (3055 perm/sec)   p_kst 8.333333e-04   p_cons 9.830714e-01   p_joint 8.333333e-04

Joint ci ratio: 2.065154e-01	ci left: 7.507749e-04	ci right 9.258314e-04	k: 359	n:430000
Cons ci ratio: 7.843825e-04	ci left: 9.826868e-01	ci right 9.834602e-01	k: 422723	n:430000
KS ci ratio: 2.065154e-01	ci left: 7.507749e-04	ci right 9.258314e-04	k: 359	n:430000
POU4F2   430000 perm   142 sec   (3020 perm/sec)   p_kst 8.348837e-04   p_cons 9.830767e-01   p_joint 8.348837e-04

Joint ci ratio: 2.042584e-01	ci left: 7.509586e-04	ci right 9.239054e-04	k: 367	n:440000
Cons ci ratio: 7.757750e-04	ci left: 9.826757e-01	ci right 9.834406e-01	k: 432547	n:440000
KS ci ratio: 2.042584e-01	ci left: 7.509586e-04	ci right 9.239054e-04	k: 367	n:440000
POU4F2   440000 perm   147 sec   (2987 perm/sec)   p_kst 8.340909e-04   p_cons 9.830614e-01   p_joint 8.340909e-04

Joint ci ratio: 2.034321e-01	ci left: 7.405966e-04	ci right 9.103812e-04	k: 370	n:450000
Cons ci ratio: 7.668301e-04	ci left: 9.826922e-01	ci right 9.834482e-01	k: 442383	n:450000
KS ci ratio: 2.034321e-01	ci left: 7.405966e-04	ci right 9.103812e-04	k: 370	n:450000
POU4F2   450000 perm   152 sec   (2955 perm/sec)   p_kst 8.222222e-04   p_cons 9.830733e-01   p_joint 8.222222e-04

Joint ci ratio: 2.012737e-01	ci left: 7.410069e-04	ci right 9.088616e-04	k: 378	n:460000
Cons ci ratio: 7.583359e-04	ci left: 9.827014e-01	ci right 9.834490e-01	k: 452216	n:460000
KS ci ratio: 2.012737e-01	ci left: 7.410069e-04	ci right 9.088616e-04	k: 378	n:460000
POU4F2   460000 perm   157 sec   (2925 perm/sec)   p_kst 8.217391e-04   p_cons 9.830783e-01   p_joint 8.217391e-04

Joint ci ratio: 1.976549e-01	ci left: 7.535409e-04	ci right 9.207964e-04	k: 392	n:470000
Cons ci ratio: 7.501178e-04	ci left: 9.827102e-01	ci right 9.834497e-01	k: 462049	n:470000
KS ci ratio: 1.976549e-01	ci left: 7.535409e-04	ci right 9.207964e-04	k: 392	n:470000
POU4F2   470000 perm   162 sec   (2895 perm/sec)   p_kst 8.340426e-04   p_cons 9.830830e-01   p_joint 8.340426e-04

Joint ci ratio: 1.964102e-01	ci left: 7.477447e-04	ci right 9.125433e-04	k: 397	n:480000
Cons ci ratio: 7.425794e-04	ci left: 9.826998e-01	ci right 9.834318e-01	k: 471873	n:480000
KS ci ratio: 1.964102e-01	ci left: 7.477447e-04	ci right 9.125433e-04	k: 397	n:480000
POU4F2   480000 perm   168 sec   (2866 perm/sec)   p_kst 8.270833e-04   p_cons 9.830688e-01   p_joint 8.270833e-04

Joint ci ratio: 1.949467e-01	ci left: 7.441295e-04	ci right 9.067642e-04	k: 403	n:490000
Cons ci ratio: 7.352634e-04	ci left: 9.826898e-01	ci right 9.834146e-01	k: 481697	n:490000
KS ci ratio: 1.949467e-01	ci left: 7.441295e-04	ci right 9.067642e-04	k: 403	n:490000
POU4F2   490000 perm   173 sec   (2834 perm/sec)   p_kst 8.224490e-04   p_cons 9.830551e-01   p_joint 8.224490e-04

Joint ci ratio: 1.928107e-01	ci left: 7.463733e-04	ci right 9.075015e-04	k: 412	n:500000
Cons ci ratio: 7.282026e-04	ci left: 9.826783e-01	ci right 9.833961e-01	k: 491520	n:500000
KS ci ratio: 1.928107e-01	ci left: 7.463733e-04	ci right 9.075015e-04	k: 412	n:500000
POU4F2   500000 perm   178 sec   (2802 perm/sec)   p_kst 8.240000e-04   p_cons 9.830400e-01   p_joint 8.240000e-04

Joint ci ratio: 1.911975e-01	ci left: 7.448042e-04	ci right 9.040919e-04	k: 419	n:510000
Cons ci ratio: 7.207050e-04	ci left: 9.826969e-01	ci right 9.834074e-01	k: 501358	n:510000
KS ci ratio: 1.911975e-01	ci left: 7.448042e-04	ci right 9.040919e-04	k: 419	n:510000
POU4F2   510000 perm   184 sec   (2774 perm/sec)   p_kst 8.215686e-04   p_cons 9.830549e-01   p_joint 8.215686e-04

Joint ci ratio: 1.885225e-01	ci left: 7.524614e-04	ci right 9.108776e-04	k: 431	n:520000
Cons ci ratio: 7.144634e-04	ci left: 9.826663e-01	ci right 9.833706e-01	k: 511171	n:520000
KS ci ratio: 1.885225e-01	ci left: 7.524614e-04	ci right 9.108776e-04	k: 431	n:520000
POU4F2   520000 perm   190 sec   (2740 perm/sec)   p_kst 8.288462e-04   p_cons 9.830212e-01   p_joint 8.288462e-04

Joint ci ratio: 1.861668e-01	ci left: 7.580456e-04	ci right 9.154180e-04	k: 442	n:530000
Cons ci ratio: 7.081386e-04	ci left: 9.826484e-01	ci right 9.833463e-01	k: 520990	n:530000
KS ci ratio: 1.861668e-01	ci left: 7.580456e-04	ci right 9.154180e-04	k: 442	n:530000
POU4F2   530000 perm   195 sec   (2712 perm/sec)   p_kst 8.339623e-04   p_cons 9.830000e-01   p_joint 8.339623e-04

Joint ci ratio: 1.845083e-01	ci left: 7.581352e-04	ci right 9.139672e-04	k: 450	n:540000
Cons ci ratio: 7.017448e-04	ci left: 9.826423e-01	ci right 9.833340e-01	k: 530815	n:540000
KS ci ratio: 1.845083e-01	ci left: 7.581352e-04	ci right 9.139672e-04	k: 450	n:540000
POU4F2   540000 perm   202 sec   (2678 perm/sec)   p_kst 8.333333e-04   p_cons 9.829907e-01   p_joint 8.333333e-04

Joint ci ratio: 1.834945e-01	ci left: 7.530229e-04	ci right 9.068590e-04	k: 455	n:550000
Cons ci ratio: 6.955965e-04	ci left: 9.826329e-01	ci right 9.833184e-01	k: 540638	n:550000
KS ci ratio: 1.834945e-01	ci left: 7.530229e-04	ci right 9.068590e-04	k: 455	n:550000
POU4F2   550000 perm   207 sec   (2653 perm/sec)   p_kst 8.272727e-04   p_cons 9.829782e-01   p_joint 8.272727e-04

Joint ci ratio: 1.821024e-01	ci left: 7.515041e-04	ci right 9.037366e-04	k: 462	n:560000
Cons ci ratio: 6.894963e-04	ci left: 9.826292e-01	ci right 9.833087e-01	k: 550464	n:560000
KS ci ratio: 1.821024e-01	ci left: 7.515041e-04	ci right 9.037366e-04	k: 462	n:560000
POU4F2   560000 perm   213 sec   (2628 perm/sec)   p_kst 8.250000e-04   p_cons 9.829714e-01   p_joint 8.250000e-04

Joint ci ratio: 1.801668e-01	ci left: 7.550683e-04	ci right 9.062198e-04	k: 472	n:570000
Cons ci ratio: 6.834463e-04	ci left: 9.826310e-01	ci right 9.833045e-01	k: 560293	n:570000
KS ci ratio: 1.801668e-01	ci left: 7.550683e-04	ci right 9.062198e-04	k: 472	n:570000
POU4F2   570000 perm   219 sec   (2603 perm/sec)   p_kst 8.280702e-04   p_cons 9.829702e-01   p_joint 8.280702e-04

Joint ci ratio: 1.781073e-01	ci left: 7.601652e-04	ci right 9.104102e-04	k: 483	n:580000
Cons ci ratio: 6.768897e-04	ci left: 9.826658e-01	ci right 9.833328e-01	k: 570141	n:580000
KS ci ratio: 1.781073e-01	ci left: 7.601652e-04	ci right 9.104102e-04	k: 483	n:580000
POU4F2   580000 perm   225 sec   (2577 perm/sec)   p_kst 8.327586e-04   p_cons 9.830017e-01   p_joint 8.327586e-04

Joint ci ratio: 1.752333e-01	ci left: 7.732010e-04	ci right 9.232955e-04	k: 499	n:590000
Cons ci ratio: 6.717752e-04	ci left: 9.826361e-01	ci right 9.832981e-01	k: 579952	n:590000
KS ci ratio: 1.752333e-01	ci left: 7.732010e-04	ci right 9.232955e-04	k: 499	n:590000
POU4F2   590000 perm   231 sec   (2552 perm/sec)   p_kst 8.457627e-04   p_cons 9.829695e-01   p_joint 8.457627e-04

Joint ci ratio: 1.738481e-01	ci left: 7.730652e-04	ci right 9.218225e-04	k: 507	n:600000
Cons ci ratio: 6.664082e-04	ci left: 9.826260e-01	ci right 9.832827e-01	k: 589774	n:600000
KS ci ratio: 1.738481e-01	ci left: 7.730652e-04	ci right 9.218225e-04	k: 507	n:600000
POU4F2   600000 perm   237 sec   (2528 perm/sec)   p_kst 8.450000e-04   p_cons 9.829567e-01   p_joint 8.450000e-04

Joint ci ratio: 1.719955e-01	ci left: 7.776445e-04	ci right 9.255229e-04	k: 518	n:610000
Cons ci ratio: 6.609087e-04	ci left: 9.826295e-01	ci right 9.832807e-01	k: 599604	n:610000
KS ci ratio: 1.719955e-01	ci left: 7.776445e-04	ci right 9.255229e-04	k: 518	n:610000
POU4F2   610000 perm   244 sec   (2505 perm/sec)   p_kst 8.491803e-04   p_cons 9.829574e-01   p_joint 8.491803e-04

Joint ci ratio: 1.703619e-01	ci left: 7.805400e-04	ci right 9.274144e-04	k: 528	n:620000
Cons ci ratio: 6.558272e-04	ci left: 9.826182e-01	ci right 9.832644e-01	k: 609425	n:620000
KS ci ratio: 1.703619e-01	ci left: 7.805400e-04	ci right 9.274144e-04	k: 528	n:620000
POU4F2   620000 perm   250 sec   (2482 perm/sec)   p_kst 8.516129e-04   p_cons 9.829435e-01   p_joint 8.516129e-04

Joint ci ratio: 1.695629e-01	ci left: 7.757492e-04	ci right 9.209675e-04	k: 533	n:630000
Cons ci ratio: 6.506143e-04	ci left: 9.826201e-01	ci right 9.832612e-01	k: 619254	n:630000
KS ci ratio: 1.695629e-01	ci left: 7.757492e-04	ci right 9.209675e-04	k: 533	n:630000
POU4F2   630000 perm   256 sec   (2460 perm/sec)   p_kst 8.460317e-04   p_cons 9.829429e-01   p_joint 8.460317e-04

Joint ci ratio: 1.676888e-01	ci left: 7.815870e-04	ci right 9.261177e-04	k: 545	n:640000
Cons ci ratio: 6.455539e-04	ci left: 9.826204e-01	ci right 9.832565e-01	k: 629082	n:640000
KS ci ratio: 1.676888e-01	ci left: 7.815870e-04	ci right 9.261177e-04	k: 545	n:640000
POU4F2   640000 perm   263 sec   (2438 perm/sec)   p_kst 8.515625e-04   p_cons 9.829406e-01   p_joint 8.515625e-04

Joint ci ratio: 1.667753e-01	ci left: 7.784069e-04	ci right 9.214867e-04	k: 551	n:650000
Cons ci ratio: 6.410210e-04	ci left: 9.825990e-01	ci right 9.832306e-01	k: 638896	n:650000
KS ci ratio: 1.667753e-01	ci left: 7.784069e-04	ci right 9.214867e-04	k: 551	n:650000
POU4F2   650000 perm   269 sec   (2417 perm/sec)   p_kst 8.476923e-04   p_cons 9.829169e-01   p_joint 8.476923e-04

Joint ci ratio: 1.651377e-01	ci left: 7.825875e-04	ci right 9.248828e-04	k: 562	n:660000
Cons ci ratio: 6.358349e-04	ci left: 9.826180e-01	ci right 9.832444e-01	k: 648736	n:660000
KS ci ratio: 1.651377e-01	ci left: 7.825875e-04	ci right 9.248828e-04	k: 562	n:660000
POU4F2   660000 perm   276 sec   (2395 perm/sec)   p_kst 8.515152e-04   p_cons 9.829333e-01   p_joint 8.515152e-04

Joint ci ratio: 1.645547e-01	ci left: 7.766307e-04	ci right 9.172951e-04	k: 566	n:670000
Cons ci ratio: 6.314178e-04	ci left: 9.826018e-01	ci right 9.832239e-01	k: 658553	n:670000
KS ci ratio: 1.645547e-01	ci left: 7.766307e-04	ci right 9.172951e-04	k: 566	n:670000
POU4F2   670000 perm   283 sec   (2369 perm/sec)   p_kst 8.447761e-04   p_cons 9.829149e-01   p_joint 8.447761e-04

Joint ci ratio: 1.632640e-01	ci left: 7.779021e-04	ci right 9.175831e-04	k: 575	n:680000
Cons ci ratio: 6.266518e-04	ci left: 9.826098e-01	ci right 9.832272e-01	k: 668386	n:680000
KS ci ratio: 1.632640e-01	ci left: 7.779021e-04	ci right 9.175831e-04	k: 575	n:680000
POU4F2   680000 perm   289 sec   (2349 perm/sec)   p_kst 8.455882e-04   p_cons 9.829206e-01   p_joint 8.455882e-04

Joint ci ratio: 1.617268e-01	ci left: 7.819221e-04	ci right 9.208744e-04	k: 586	n:690000
Cons ci ratio: 6.221799e-04	ci left: 9.826074e-01	ci right 9.832204e-01	k: 678212	n:690000
KS ci ratio: 1.617268e-01	ci left: 7.819221e-04	ci right 9.208744e-04	k: 586	n:690000
POU4F2   690000 perm   296 sec   (2327 perm/sec)   p_kst 8.492754e-04   p_cons 9.829159e-01   p_joint 8.492754e-04

Joint ci ratio: 1.598314e-01	ci left: 7.899473e-04	ci right 9.285227e-04	k: 600	n:700000
Cons ci ratio: 6.179863e-04	ci left: 9.825950e-01	ci right 9.832038e-01	k: 688031	n:700000
KS ci ratio: 1.598314e-01	ci left: 7.899473e-04	ci right 9.285227e-04	k: 600	n:700000
POU4F2   700000 perm   304 sec   (2306 perm/sec)   p_kst 8.571429e-04   p_cons 9.829014e-01   p_joint 8.571429e-04

Joint ci ratio: 1.591710e-01	ci left: 7.855823e-04	ci right 9.227683e-04	k: 605	n:710000
Cons ci ratio: 6.140558e-04	ci left: 9.825730e-01	ci right 9.831780e-01	k: 697843	n:710000
KS ci ratio: 1.591710e-01	ci left: 7.855823e-04	ci right 9.227683e-04	k: 605	n:710000
POU4F2   710000 perm   310 sec   (2287 perm/sec)   p_kst 8.521127e-04   p_cons 9.828775e-01   p_joint 8.521127e-04

Joint ci ratio: 1.581307e-01	ci left: 7.853415e-04	ci right 9.215039e-04	k: 613	n:720000
Cons ci ratio: 6.100474e-04	ci left: 9.825601e-01	ci right 9.831610e-01	k: 707661	n:720000
KS ci ratio: 1.581307e-01	ci left: 7.853415e-04	ci right 9.215039e-04	k: 613	n:720000
POU4F2   720000 perm   318 sec   (2267 perm/sec)   p_kst 8.513889e-04   p_cons 9.828625e-01   p_joint 8.513889e-04

Joint ci ratio: 1.572372e-01	ci left: 7.837940e-04	ci right 9.188478e-04	k: 620	n:730000
Cons ci ratio: 6.056725e-04	ci left: 9.825724e-01	ci right 9.831690e-01	k: 717497	n:730000
KS ci ratio: 1.572372e-01	ci left: 7.837940e-04	ci right 9.188478e-04	k: 620	n:730000
POU4F2   730000 perm   325 sec   (2249 perm/sec)   p_kst 8.493151e-04   p_cons 9.828726e-01   p_joint 8.493151e-04

Joint ci ratio: 1.559861e-01	ci left: 7.861862e-04	ci right 9.204735e-04	k: 630	n:740000
Cons ci ratio: 6.019938e-04	ci left: 9.825503e-01	ci right 9.831433e-01	k: 727308	n:740000
KS ci ratio: 1.559861e-01	ci left: 7.861862e-04	ci right 9.204735e-04	k: 630	n:740000
POU4F2   740000 perm   332 sec   (2229 perm/sec)   p_kst 8.513514e-04   p_cons 9.828486e-01   p_joint 8.513514e-04

Joint ci ratio: 1.546437e-01	ci left: 7.898005e-04	ci right 9.234366e-04	k: 641	n:750000
Cons ci ratio: 5.984037e-04	ci left: 9.825274e-01	ci right 9.831168e-01	k: 737118	n:750000
KS ci ratio: 1.546437e-01	ci left: 7.898005e-04	ci right 9.234366e-04	k: 641	n:750000
POU4F2   750000 perm   339 sec   (2211 perm/sec)   p_kst 8.546667e-04   p_cons 9.828240e-01   p_joint 8.546667e-04

Joint ci ratio: 1.536892e-01	ci left: 7.895286e-04	ci right 9.222182e-04	k: 649	n:760000
Cons ci ratio: 5.947833e-04	ci left: 9.825105e-01	ci right 9.830963e-01	k: 746932	n:760000
KS ci ratio: 1.536892e-01	ci left: 7.895286e-04	ci right 9.222182e-04	k: 649	n:760000
POU4F2   760000 perm   347 sec   (2193 perm/sec)   p_kst 8.539474e-04   p_cons 9.828053e-01   p_joint 8.539474e-04

Joint ci ratio: 1.528684e-01	ci left: 7.880171e-04	ci right 9.196807e-04	k: 656	n:770000
Cons ci ratio: 5.907958e-04	ci left: 9.825189e-01	ci right 9.831008e-01	k: 756765	n:770000
KS ci ratio: 1.528684e-01	ci left: 7.880171e-04	ci right 9.196807e-04	k: 656	n:770000
POU4F2   770000 perm   354 sec   (2176 perm/sec)   p_kst 8.519481e-04   p_cons 9.828117e-01   p_joint 8.519481e-04

Joint ci ratio: 1.522904e-01	ci left: 7.840798e-04	ci right 9.145449e-04	k: 661	n:780000
Cons ci ratio: 5.873328e-04	ci left: 9.825013e-01	ci right 9.830798e-01	k: 766578	n:780000
KS ci ratio: 1.522904e-01	ci left: 7.840798e-04	ci right 9.145449e-04	k: 661	n:780000
POU4F2   780000 perm   361 sec   (2159 perm/sec)   p_kst 8.474359e-04   p_cons 9.827923e-01   p_joint 8.474359e-04

Joint ci ratio: 1.517188e-01	ci left: 7.802430e-04	ci right 9.095382e-04	k: 666	n:790000
Cons ci ratio: 5.834052e-04	ci left: 9.825147e-01	ci right 9.830893e-01	k: 776415	n:790000
KS ci ratio: 1.517188e-01	ci left: 7.802430e-04	ci right 9.095382e-04	k: 666	n:790000
POU4F2   790000 perm   369 sec   (2141 perm/sec)   p_kst 8.430380e-04   p_cons 9.828038e-01   p_joint 8.430380e-04

Joint ci ratio: 1.510412e-01	ci left: 7.777058e-04	ci right 9.059530e-04	k: 672	n:800000
Cons ci ratio: 5.795550e-04	ci left: 9.825278e-01	ci right 9.830987e-01	k: 786252	n:800000
KS ci ratio: 1.510412e-01	ci left: 7.777058e-04	ci right 9.059530e-04	k: 672	n:800000
POU4F2   800000 perm   376 sec   (2125 perm/sec)   p_kst 8.400000e-04   p_cons 9.828150e-01   p_joint 8.400000e-04

Joint ci ratio: 1.497121e-01	ci left: 7.823620e-04	ci right 9.101400e-04	k: 684	n:810000
Cons ci ratio: 5.759904e-04	ci left: 9.825282e-01	ci right 9.830955e-01	k: 796079	n:810000
KS ci ratio: 1.497121e-01	ci left: 7.823620e-04	ci right 9.101400e-04	k: 684	n:810000
POU4F2   810000 perm   384 sec   (2108 perm/sec)   p_kst 8.444444e-04   p_cons 9.828136e-01   p_joint 8.444444e-04

Joint ci ratio: 1.491690e-01	ci left: 7.786904e-04	ci right 9.053663e-04	k: 689	n:820000
Cons ci ratio: 5.723047e-04	ci left: 9.825396e-01	ci right 9.831033e-01	k: 805915	n:820000
KS ci ratio: 1.491690e-01	ci left: 7.786904e-04	ci right 9.053663e-04	k: 689	n:820000
POU4F2   820000 perm   392 sec   (2093 perm/sec)   p_kst 8.402439e-04   p_cons 9.828232e-01   p_joint 8.402439e-04

Joint ci ratio: 1.478882e-01	ci left: 7.832293e-04	ci right 9.094528e-04	k: 701	n:830000
Cons ci ratio: 5.686278e-04	ci left: 9.825544e-01	ci right 9.831145e-01	k: 815754	n:830000
KS ci ratio: 1.478882e-01	ci left: 7.832293e-04	ci right 9.094528e-04	k: 701	n:830000
POU4F2   830000 perm   400 sec   (2076 perm/sec)   p_kst 8.445783e-04   p_cons 9.828361e-01   p_joint 8.445783e-04

Joint ci ratio: 1.473646e-01	ci left: 7.796375e-04	ci right 9.047983e-04	k: 706	n:840000
Cons ci ratio: 5.653397e-04	ci left: 9.825497e-01	ci right 9.831065e-01	k: 825577	n:840000
KS ci ratio: 1.473646e-01	ci left: 7.796375e-04	ci right 9.047983e-04	k: 706	n:840000
POU4F2   840000 perm   408 sec   (2061 perm/sec)   p_kst 8.404762e-04   p_cons 9.828298e-01   p_joint 8.404762e-04

Joint ci ratio: 1.465379e-01	ci left: 7.795310e-04	ci right 9.039112e-04	k: 714	n:850000
Cons ci ratio: 5.618140e-04	ci left: 9.825629e-01	ci right 9.831162e-01	k: 835415	n:850000
KS ci ratio: 1.465379e-01	ci left: 7.795310e-04	ci right 9.039112e-04	k: 714	n:850000
POU4F2   850000 perm   416 sec   (2045 perm/sec)   p_kst 8.400000e-04   p_cons 9.828412e-01   p_joint 8.400000e-04

Joint ci ratio: 1.458260e-01	ci left: 7.783085e-04	ci right 9.018376e-04	k: 721	n:860000
Cons ci ratio: 5.582569e-04	ci left: 9.825816e-01	ci right 9.831314e-01	k: 845258	n:860000
KS ci ratio: 1.458260e-01	ci left: 7.783085e-04	ci right 9.018376e-04	k: 721	n:860000
POU4F2   860000 perm   424 sec   (2030 perm/sec)   p_kst 8.383721e-04   p_cons 9.828581e-01   p_joint 8.383721e-04

Joint ci ratio: 1.451243e-01	ci left: 7.771155e-04	ci right 8.998104e-04	k: 728	n:870000
Cons ci ratio: 5.549365e-04	ci left: 9.825895e-01	ci right 9.831360e-01	k: 855092	n:870000
KS ci ratio: 1.451243e-01	ci left: 7.771155e-04	ci right 8.998104e-04	k: 728	n:870000
POU4F2   870000 perm   432 sec   (2015 perm/sec)   p_kst 8.367816e-04   p_cons 9.828644e-01   p_joint 8.367816e-04

Joint ci ratio: 1.447281e-01	ci left: 7.726652e-04	ci right 8.942956e-04	k: 732	n:880000
Cons ci ratio: 5.518607e-04	ci left: 9.825857e-01	ci right 9.831293e-01	k: 864916	n:880000
KS ci ratio: 1.447281e-01	ci left: 7.726652e-04	ci right 8.942956e-04	k: 732	n:880000
POU4F2   880000 perm   440 sec   (2001 perm/sec)   p_kst 8.318182e-04   p_cons 9.828591e-01   p_joint 8.318182e-04

Joint ci ratio: 1.441396e-01	ci left: 7.704814e-04	ci right 8.912324e-04	k: 738	n:890000
Cons ci ratio: 5.485426e-04	ci left: 9.826002e-01	ci right 9.831405e-01	k: 874756	n:890000
KS ci ratio: 1.441396e-01	ci left: 7.704814e-04	ci right 8.912324e-04	k: 738	n:890000
POU4F2   890000 perm   448 sec   (1986 perm/sec)   p_kst 8.292135e-04   p_cons 9.828719e-01   p_joint 8.292135e-04

Joint ci ratio: 1.433657e-01	ci left: 7.704897e-04	ci right 8.905382e-04	k: 746	n:900000
Cons ci ratio: 5.452653e-04	ci left: 9.826155e-01	ci right 9.831525e-01	k: 884597	n:900000
KS ci ratio: 1.433657e-01	ci left: 7.704897e-04	ci right 8.905382e-04	k: 746	n:900000
POU4F2   900000 perm   456 sec   (1972 perm/sec)   p_kst 8.288889e-04   p_cons 9.828856e-01   p_joint 8.288889e-04

Joint ci ratio: 1.431746e-01	ci left: 7.641416e-04	ci right 8.830289e-04	k: 748	n:910000
Cons ci ratio: 5.424354e-04	ci left: 9.826061e-01	ci right 9.831403e-01	k: 894416	n:910000
KS ci ratio: 1.431746e-01	ci left: 7.641416e-04	ci right 8.830289e-04	k: 748	n:910000
POU4F2   910000 perm   465 sec   (1958 perm/sec)   p_kst 8.219780e-04   p_cons 9.828747e-01   p_joint 8.219780e-04

Joint ci ratio: 1.425104e-01	ci left: 7.631725e-04	ci right 8.813112e-04	k: 755	n:920000
Cons ci ratio: 5.392831e-04	ci left: 9.826199e-01	ci right 9.831510e-01	k: 904256	n:920000
KS ci ratio: 1.425104e-01	ci left: 7.631725e-04	ci right 8.813112e-04	k: 755	n:920000
POU4F2   920000 perm   473 sec   (1944 perm/sec)   p_kst 8.206522e-04   p_cons 9.828870e-01   p_joint 8.206522e-04

Joint ci ratio: 1.418552e-01	ci left: 7.622254e-04	ci right 8.796292e-04	k: 762	n:930000
Cons ci ratio: 5.363735e-04	ci left: 9.826215e-01	ci right 9.831497e-01	k: 914085	n:930000
KS ci ratio: 1.418552e-01	ci left: 7.622254e-04	ci right 8.796292e-04	k: 762	n:930000
POU4F2   930000 perm   482 sec   (1931 perm/sec)   p_kst 8.193548e-04   p_cons 9.828871e-01   p_joint 8.193548e-04

Joint ci ratio: 1.408434e-01	ci left: 7.654050e-04	ci right 8.823871e-04	k: 773	n:940000
Cons ci ratio: 5.334936e-04	ci left: 9.826241e-01	ci right 9.831495e-01	k: 923915	n:940000
KS ci ratio: 1.408434e-01	ci left: 7.654050e-04	ci right 8.823871e-04	k: 773	n:940000
POU4F2   940000 perm   490 sec   (1917 perm/sec)   p_kst 8.223404e-04   p_cons 9.828883e-01   p_joint 8.223404e-04

Joint ci ratio: 1.401211e-01	ci left: 7.654732e-04	ci right 8.818156e-04	k: 781	n:950000
Cons ci ratio: 5.304105e-04	ci left: 9.826426e-01	ci right 9.831650e-01	k: 933760	n:950000
KS ci ratio: 1.401211e-01	ci left: 7.654732e-04	ci right 8.818156e-04	k: 781	n:950000
POU4F2   950000 perm   499 sec   (1902 perm/sec)   p_kst 8.221053e-04   p_cons 9.829053e-01   p_joint 8.221053e-04

Joint ci ratio: 1.390580e-01	ci left: 7.695631e-04	ci right 8.855662e-04	k: 793	n:960000
Cons ci ratio: 5.273306e-04	ci left: 9.826639e-01	ci right 9.831832e-01	k: 943608	n:960000
KS ci ratio: 1.390580e-01	ci left: 7.695631e-04	ci right 8.855662e-04	k: 793	n:960000
POU4F2   960000 perm   508 sec   (1889 perm/sec)   p_kst 8.260417e-04   p_cons 9.829250e-01   p_joint 8.260417e-04

Joint ci ratio: 1.384491e-01	ci left: 7.685954e-04	ci right 8.839035e-04	k: 800	n:970000
Cons ci ratio: 5.245609e-04	ci left: 9.826681e-01	ci right 9.831847e-01	k: 953440	n:970000
KS ci ratio: 1.384491e-01	ci left: 7.685954e-04	ci right 8.839035e-04	k: 800	n:970000
POU4F2   970000 perm   517 sec   (1875 perm/sec)   p_kst 8.247423e-04   p_cons 9.829278e-01   p_joint 8.247423e-04

Joint ci ratio: 1.376778e-01	ci left: 7.696191e-04	ci right 8.843847e-04	k: 809	n:980000
Cons ci ratio: 5.218185e-04	ci left: 9.826732e-01	ci right 9.831872e-01	k: 963273	n:980000
KS ci ratio: 1.376778e-01	ci left: 7.696191e-04	ci right 8.843847e-04	k: 809	n:980000
POU4F2   980000 perm   527 sec   (1861 perm/sec)   p_kst 8.255102e-04   p_cons 9.829316e-01   p_joint 8.255102e-04

Joint ci ratio: 1.370029e-01	ci left: 7.696483e-04	ci right 8.838099e-04	k: 817	n:990000
Cons ci ratio: 5.191030e-04	ci left: 9.826793e-01	ci right 9.831906e-01	k: 973107	n:990000
KS ci ratio: 1.370029e-01	ci left: 7.696483e-04	ci right 8.838099e-04	k: 817	n:990000
POU4F2   990000 perm   536 sec   (1848 perm/sec)   p_kst 8.252525e-04   p_cons 9.829364e-01   p_joint 8.252525e-04

Joint ci ratio: 1.364205e-01	ci left: 7.687124e-04	ci right 8.822111e-04	k: 824	n:1000000
Cons ci ratio: 5.168450e-04	ci left: 9.826581e-01	ci right 9.831671e-01	k: 982914	n:1000000
KS ci ratio: 1.364205e-01	ci left: 7.687124e-04	ci right 8.822111e-04	k: 824	n:1000000
POU4F2   1000000 perm   545 sec   (1835 perm/sec)   p_kst 8.240000e-04   p_cons 9.829140e-01   p_joint 8.240000e-04

Joint ci ratio: 1.356824e-01	ci left: 7.697090e-04	ci right 8.826903e-04	k: 833	n:1010000
Cons ci ratio: 5.143881e-04	ci left: 9.826523e-01	ci right 9.831588e-01	k: 992736	n:1010000
KS ci ratio: 1.356824e-01	ci left: 7.697090e-04	ci right 8.826903e-04	k: 833	n:1010000
POU4F2   1010000 perm   554 sec   (1823 perm/sec)   p_kst 8.247525e-04   p_cons 9.829069e-01   p_joint 8.247525e-04

Joint ci ratio: 1.350363e-01	ci left: 7.697404e-04	ci right 8.821450e-04	k: 841	n:1020000
Cons ci ratio: 5.116372e-04	ci left: 9.826683e-01	ci right 9.831721e-01	k: 1002580	n:1020000
KS ci ratio: 1.350363e-01	ci left: 7.697404e-04	ci right 8.821450e-04	k: 841	n:1020000
POU4F2   1020000 perm   563 sec   (1811 perm/sec)   p_kst 8.245098e-04   p_cons 9.829216e-01   p_joint 8.245098e-04

Joint ci ratio: 1.340055e-01	ci left: 7.744639e-04	ci right 8.866262e-04	k: 854	n:1030000
Cons ci ratio: 5.091064e-04	ci left: 9.826722e-01	ci right 9.831736e-01	k: 1012412	n:1030000
KS ci ratio: 1.340055e-01	ci left: 7.744639e-04	ci right 8.866262e-04	k: 854	n:1030000
POU4F2   1030000 perm   572 sec   (1800 perm/sec)   p_kst 8.291262e-04   p_cons 9.829243e-01   p_joint 8.291262e-04

Joint ci ratio: 1.332285e-01	ci left: 7.763111e-04	ci right 8.880375e-04	k: 864	n:1040000
Cons ci ratio: 5.063514e-04	ci left: 9.826936e-01	ci right 9.831922e-01	k: 1022262	n:1040000
KS ci ratio: 1.332285e-01	ci left: 7.763111e-04	ci right 8.880375e-04	k: 864	n:1040000
POU4F2   1040000 perm   582 sec   (1788 perm/sec)   p_kst 8.307692e-04   p_cons 9.829442e-01   p_joint 8.307692e-04

Joint ci ratio: 1.327690e-01	ci left: 7.744418e-04	ci right 8.854844e-04	k: 870	n:1050000
Cons ci ratio: 5.039836e-04	ci left: 9.826915e-01	ci right 9.831878e-01	k: 1032088	n:1050000
KS ci ratio: 1.327690e-01	ci left: 7.744418e-04	ci right 8.854844e-04	k: 870	n:1050000
POU4F2   1050000 perm   591 sec   (1776 perm/sec)   p_kst 8.285714e-04   p_cons 9.829410e-01   p_joint 8.285714e-04

Joint ci ratio: 1.324654e-01	ci left: 7.707841e-04	ci right 8.810296e-04	k: 874	n:1060000
Cons ci ratio: 5.016204e-04	ci left: 9.826913e-01	ci right 9.831853e-01	k: 1041916	n:1060000
KS ci ratio: 1.324654e-01	ci left: 7.707841e-04	ci right 8.810296e-04	k: 874	n:1060000
POU4F2   1060000 perm   601 sec   (1765 perm/sec)   p_kst 8.245283e-04   p_cons 9.829396e-01   p_joint 8.245283e-04

Joint ci ratio: 1.316404e-01	ci left: 7.735213e-04	ci right 8.834154e-04	k: 885	n:1070000
Cons ci ratio: 4.992067e-04	ci left: 9.826968e-01	ci right 9.831884e-01	k: 1051750	n:1070000
KS ci ratio: 1.316404e-01	ci left: 7.735213e-04	ci right 8.834154e-04	k: 885	n:1070000
POU4F2   1070000 perm   610 sec   (1753 perm/sec)   p_kst 8.271028e-04   p_cons 9.829439e-01   p_joint 8.271028e-04

Joint ci ratio: 1.311235e-01	ci left: 7.726275e-04	ci right 8.819300e-04	k: 892	n:1080000
Cons ci ratio: 4.967864e-04	ci left: 9.827050e-01	ci right 9.831942e-01	k: 1061587	n:1080000
KS ci ratio: 1.311235e-01	ci left: 7.726275e-04	ci right 8.819300e-04	k: 892	n:1080000
POU4F2   1080000 perm   620 sec   (1743 perm/sec)   p_kst 8.259259e-04   p_cons 9.829509e-01   p_joint 8.259259e-04

Joint ci ratio: 1.306853e-01	ci left: 7.708634e-04	ci right 8.795237e-04	k: 898	n:1090000
Cons ci ratio: 4.949420e-04	ci left: 9.826761e-01	ci right 9.831635e-01	k: 1071384	n:1090000
KS ci ratio: 1.306853e-01	ci left: 7.708634e-04	ci right 8.795237e-04	k: 898	n:1090000
POU4F2   1090000 perm   629 sec   (1732 perm/sec)   p_kst 8.238532e-04   p_cons 9.829211e-01   p_joint 8.238532e-04

Joint ci ratio: 1.298929e-01	ci left: 7.735297e-04	ci right 8.818538e-04	k: 909	n:1100000
Cons ci ratio: 4.929965e-04	ci left: 9.826560e-01	ci right 9.831415e-01	k: 1081190	n:1100000
KS ci ratio: 1.298929e-01	ci left: 7.735297e-04	ci right 8.818538e-04	k: 909	n:1100000
POU4F2   1100000 perm   639 sec   (1720 perm/sec)   p_kst 8.263636e-04   p_cons 9.829000e-01   p_joint 8.263636e-04

Joint ci ratio: 1.296086e-01	ci left: 7.700475e-04	ci right 8.776297e-04	k: 913	n:1110000
Cons ci ratio: 4.904944e-04	ci left: 9.826762e-01	ci right 9.831592e-01	k: 1091040	n:1110000
KS ci ratio: 1.296086e-01	ci left: 7.700475e-04	ci right 8.776297e-04	k: 913	n:1110000
POU4F2   1110000 perm   649 sec   (1709 perm/sec)   p_kst 8.225225e-04   p_cons 9.829189e-01   p_joint 8.225225e-04

Joint ci ratio: 1.291152e-01	ci left: 7.692198e-04	ci right 8.762459e-04	k: 920	n:1120000
Cons ci ratio: 4.884190e-04	ci left: 9.826690e-01	ci right 9.831499e-01	k: 1100860	n:1120000
KS ci ratio: 1.291152e-01	ci left: 7.692198e-04	ci right 8.762459e-04	k: 920	n:1120000
POU4F2   1120000 perm   659 sec   (1699 perm/sec)   p_kst 8.214286e-04   p_cons 9.829107e-01   p_joint 8.214286e-04

Joint ci ratio: 1.286274e-01	ci left: 7.684075e-04	ci right 8.748859e-04	k: 927	n:1130000
Cons ci ratio: 4.861518e-04	ci left: 9.826771e-01	ci right 9.831558e-01	k: 1110697	n:1130000
KS ci ratio: 1.286274e-01	ci left: 7.684075e-04	ci right 8.748859e-04	k: 927	n:1130000
POU4F2   1130000 perm   669 sec   (1688 perm/sec)   p_kst 8.203540e-04   p_cons 9.829177e-01   p_joint 8.203540e-04

Joint ci ratio: 1.276677e-01	ci left: 7.735543e-04	ci right 8.798854e-04	k: 941	n:1140000
Cons ci ratio: 4.841308e-04	ci left: 9.826701e-01	ci right 9.831468e-01	k: 1120517	n:1140000
KS ci ratio: 1.276677e-01	ci left: 7.735543e-04	ci right 8.798854e-04	k: 941	n:1140000
POU4F2   1140000 perm   679 sec   (1678 perm/sec)   p_kst 8.254386e-04   p_cons 9.829096e-01   p_joint 8.254386e-04

Joint ci ratio: 1.267955e-01	ci left: 7.777724e-04	ci right 8.838981e-04	k: 954	n:1150000
Cons ci ratio: 4.821970e-04	ci left: 9.826588e-01	ci right 9.831336e-01	k: 1130332	n:1150000
KS ci ratio: 1.267955e-01	ci left: 7.777724e-04	ci right 8.838981e-04	k: 954	n:1150000
POU4F2   1150000 perm   690 sec   (1667 perm/sec)   p_kst 8.295652e-04   p_cons 9.828974e-01   p_joint 8.295652e-04

Joint ci ratio: 1.265971e-01	ci left: 7.735716e-04	ci right 8.789465e-04	k: 957	n:1160000
Cons ci ratio: 4.799905e-04	ci left: 9.826685e-01	ci right 9.831411e-01	k: 1140171	n:1160000
KS ci ratio: 1.265971e-01	ci left: 7.735716e-04	ci right 8.789465e-04	k: 957	n:1160000
POU4F2   1160000 perm   700 sec   (1657 perm/sec)   p_kst 8.250000e-04   p_cons 9.829060e-01   p_joint 8.250000e-04

Joint ci ratio: 1.260065e-01	ci left: 7.744092e-04	ci right 8.793694e-04	k: 966	n:1170000
Cons ci ratio: 4.777653e-04	ci left: 9.826815e-01	ci right 9.831520e-01	k: 1150014	n:1170000
KS ci ratio: 1.260065e-01	ci left: 7.744092e-04	ci right 8.793694e-04	k: 966	n:1170000
POU4F2   1170000 perm   711 sec   (1646 perm/sec)   p_kst 8.256410e-04   p_cons 9.829179e-01   p_joint 8.256410e-04

Joint ci ratio: 1.254242e-01	ci left: 7.752336e-04	ci right 8.797839e-04	k: 975	n:1180000
Cons ci ratio: 4.755826e-04	ci left: 9.826935e-01	ci right 9.831618e-01	k: 1159856	n:1180000
KS ci ratio: 1.254242e-01	ci left: 7.752336e-04	ci right 8.797839e-04	k: 975	n:1180000
POU4F2   1180000 perm   722 sec   (1635 perm/sec)   p_kst 8.262712e-04   p_cons 9.829288e-01   p_joint 8.262712e-04

Joint ci ratio: 1.248498e-01	ci left: 7.760454e-04	ci right 8.801904e-04	k: 984	n:1190000
Cons ci ratio: 4.736901e-04	ci left: 9.826866e-01	ci right 9.831530e-01	k: 1169676	n:1190000
KS ci ratio: 1.248498e-01	ci left: 7.760454e-04	ci right 8.801904e-04	k: 984	n:1190000
POU4F2   1190000 perm   732 sec   (1625 perm/sec)   p_kst 8.268908e-04   p_cons 9.829210e-01   p_joint 8.268908e-04

Joint ci ratio: 1.242208e-01	ci left: 7.776521e-04	ci right 8.814482e-04	k: 994	n:1200000
Cons ci ratio: 4.716795e-04	ci left: 9.826899e-01	ci right 9.831544e-01	k: 1179508	n:1200000
KS ci ratio: 1.242208e-01	ci left: 7.776521e-04	ci right 8.814482e-04	k: 994	n:1200000
POU4F2   1200000 perm   743 sec   (1615 perm/sec)   p_kst 8.283333e-04   p_cons 9.829233e-01   p_joint 8.283333e-04

Joint ci ratio: 1.236011e-01	ci left: 7.792336e-04	ci right 8.826840e-04	k: 1004	n:1210000
Cons ci ratio: 4.696365e-04	ci left: 9.826974e-01	ci right 9.831598e-01	k: 1189345	n:1210000
KS ci ratio: 1.236011e-01	ci left: 7.792336e-04	ci right 8.826840e-04	k: 1004	n:1210000
POU4F2   1210000 perm   754 sec   (1605 perm/sec)   p_kst 8.297521e-04   p_cons 9.829298e-01   p_joint 8.297521e-04

Joint ci ratio: 1.232950e-01	ci left: 7.768181e-04	ci right 8.796738e-04	k: 1009	n:1220000
Cons ci ratio: 4.677911e-04	ci left: 9.826923e-01	ci right 9.831529e-01	k: 1199167	n:1220000
KS ci ratio: 1.232950e-01	ci left: 7.768181e-04	ci right 8.796738e-04	k: 1009	n:1220000
POU4F2   1220000 perm   765 sec   (1595 perm/sec)   p_kst 8.270492e-04   p_cons 9.829238e-01   p_joint 8.270492e-04

Joint ci ratio: 1.228700e-01	ci left: 7.760184e-04	ci right 8.783882e-04	k: 1016	n:1230000
Cons ci ratio: 4.660912e-04	ci left: 9.826783e-01	ci right 9.831373e-01	k: 1208978	n:1230000
KS ci ratio: 1.228700e-01	ci left: 7.760184e-04	ci right 8.783882e-04	k: 1016	n:1230000
POU4F2   1230000 perm   776 sec   (1585 perm/sec)   p_kst 8.260163e-04   p_cons 9.829089e-01   p_joint 8.260163e-04

Joint ci ratio: 1.222107e-01	ci left: 7.783593e-04	ci right 8.804471e-04	k: 1027	n:1240000
Cons ci ratio: 4.642535e-04	ci left: 9.826760e-01	ci right 9.831331e-01	k: 1218803	n:1240000
KS ci ratio: 1.222107e-01	ci left: 7.783593e-04	ci right 8.804471e-04	k: 1027	n:1240000
POU4F2   1240000 perm   787 sec   (1576 perm/sec)   p_kst 8.282258e-04   p_cons 9.829056e-01   p_joint 8.282258e-04

Joint ci ratio: 1.217968e-01	ci left: 7.775615e-04	ci right 8.791744e-04	k: 1034	n:1250000
Cons ci ratio: 4.624153e-04	ci left: 9.826752e-01	ci right 9.831305e-01	k: 1228630	n:1250000
KS ci ratio: 1.217968e-01	ci left: 7.775615e-04	ci right 8.791744e-04	k: 1034	n:1250000
POU4F2   1250000 perm   797 sec   (1568 perm/sec)   p_kst 8.272000e-04   p_cons 9.829040e-01   p_joint 8.272000e-04

Joint ci ratio: 1.216209e-01	ci left: 7.736987e-04	ci right 8.746503e-04	k: 1037	n:1260000
Cons ci ratio: 4.608271e-04	ci left: 9.826577e-01	ci right 9.831115e-01	k: 1238436	n:1260000
KS ci ratio: 1.216209e-01	ci left: 7.736987e-04	ci right 8.746503e-04	k: 1037	n:1260000
POU4F2   1260000 perm   808 sec   (1559 perm/sec)   p_kst 8.230159e-04   p_cons 9.828857e-01   p_joint 8.230159e-04

Joint ci ratio: 1.212129e-01	ci left: 7.729510e-04	ci right 8.734425e-04	k: 1044	n:1270000
Cons ci ratio: 4.590721e-04	ci left: 9.826540e-01	ci right 9.831060e-01	k: 1248259	n:1270000
KS ci ratio: 1.212129e-01	ci left: 7.729510e-04	ci right 8.734425e-04	k: 1044	n:1270000
POU4F2   1270000 perm   819 sec   (1550 perm/sec)   p_kst 8.220472e-04   p_cons 9.828811e-01   p_joint 8.220472e-04

Joint ci ratio: 1.208091e-01	ci left: 7.722155e-04	ci right 8.722529e-04	k: 1051	n:1280000
Cons ci ratio: 4.574855e-04	ci left: 9.826393e-01	ci right 9.830897e-01	k: 1258068	n:1280000
KS ci ratio: 1.208091e-01	ci left: 7.722155e-04	ci right 8.722529e-04	k: 1051	n:1280000
POU4F2   1280000 perm   830 sec   (1541 perm/sec)   p_kst 8.210937e-04   p_cons 9.828656e-01   p_joint 8.210937e-04

Joint ci ratio: 1.203523e-01	ci left: 7.722438e-04	ci right 8.718798e-04	k: 1059	n:1290000
Cons ci ratio: 4.557052e-04	ci left: 9.826405e-01	ci right 9.830891e-01	k: 1267897	n:1290000
KS ci ratio: 1.203523e-01	ci left: 7.722438e-04	ci right 8.718798e-04	k: 1059	n:1290000
POU4F2   1290000 perm   842 sec   (1532 perm/sec)   p_kst 8.209302e-04   p_cons 9.828659e-01   p_joint 8.209302e-04

Joint ci ratio: 1.201261e-01	ci left: 7.692878e-04	ci right 8.683425e-04	k: 1063	n:1300000
Cons ci ratio: 4.539559e-04	ci left: 9.826408e-01	ci right 9.830878e-01	k: 1277725	n:1300000
KS ci ratio: 1.201261e-01	ci left: 7.692878e-04	ci right 8.683425e-04	k: 1063	n:1300000
POU4F2   1300000 perm   853 sec   (1524 perm/sec)   p_kst 8.176923e-04   p_cons 9.828654e-01   p_joint 8.176923e-04

Joint ci ratio: 1.196770e-01	ci left: 7.693391e-04	ci right 8.680039e-04	k: 1071	n:1310000
Cons ci ratio: 4.523802e-04	ci left: 9.826297e-01	ci right 9.830751e-01	k: 1287538	n:1310000
KS ci ratio: 1.196770e-01	ci left: 7.693391e-04	ci right 8.680039e-04	k: 1071	n:1310000
POU4F2   1310000 perm   864 sec   (1516 perm/sec)   p_kst 8.175573e-04   p_cons 9.828534e-01   p_joint 8.175573e-04

Joint ci ratio: 1.193436e-01	ci left: 7.679203e-04	ci right 8.661094e-04	k: 1077	n:1320000
Cons ci ratio: 4.505269e-04	ci left: 9.826408e-01	ci right 9.830843e-01	k: 1297380	n:1320000
KS ci ratio: 1.193436e-01	ci left: 7.679203e-04	ci right 8.661094e-04	k: 1077	n:1320000
POU4F2   1320000 perm   876 sec   (1507 perm/sec)   p_kst 8.159091e-04   p_cons 9.828636e-01   p_joint 8.159091e-04

Joint ci ratio: 1.190679e-01	ci left: 7.657937e-04	ci right 8.634688e-04	k: 1082	n:1330000
Cons ci ratio: 4.485457e-04	ci left: 9.826631e-01	ci right 9.831047e-01	k: 1307237	n:1330000
KS ci ratio: 1.190679e-01	ci left: 7.657937e-04	ci right 8.634688e-04	k: 1082	n:1330000
POU4F2   1330000 perm   887 sec   (1499 perm/sec)   p_kst 8.135338e-04   p_cons 9.828850e-01   p_joint 8.135338e-04

Joint ci ratio: 1.186306e-01	ci left: 7.658715e-04	ci right 8.631726e-04	k: 1090	n:1340000
Cons ci ratio: 4.469070e-04	ci left: 9.826610e-01	ci right 9.831010e-01	k: 1317062	n:1340000
KS ci ratio: 1.186306e-01	ci left: 7.658715e-04	ci right 8.631726e-04	k: 1090	n:1340000
POU4F2   1340000 perm   899 sec   (1490 perm/sec)   p_kst 8.134328e-04   p_cons 9.828821e-01   p_joint 8.134328e-04

Joint ci ratio: 1.181980e-01	ci left: 7.659488e-04	ci right 8.628801e-04	k: 1098	n:1350000
Cons ci ratio: 4.450704e-04	ci left: 9.826754e-01	ci right 9.831136e-01	k: 1326909	n:1350000
KS ci ratio: 1.181980e-01	ci left: 7.659488e-04	ci right 8.628801e-04	k: 1098	n:1350000
POU4F2   1350000 perm   911 sec   (1482 perm/sec)   p_kst 8.133333e-04   p_cons 9.828956e-01   p_joint 8.133333e-04

Joint ci ratio: 1.177702e-01	ci left: 7.660256e-04	ci right 8.625913e-04	k: 1106	n:1360000
Cons ci ratio: 4.434015e-04	ci left: 9.826785e-01	ci right 9.831150e-01	k: 1336741	n:1360000
KS ci ratio: 1.177702e-01	ci left: 7.660256e-04	ci right 8.625913e-04	k: 1106	n:1360000
POU4F2   1360000 perm   923 sec   (1474 perm/sec)   p_kst 8.132353e-04   p_cons 9.828978e-01   p_joint 8.132353e-04

Joint ci ratio: 1.173996e-01	ci left: 7.653933e-04	ci right 8.615547e-04	k: 1113	n:1370000
Cons ci ratio: 4.416266e-04	ci left: 9.826911e-01	ci right 9.831259e-01	k: 1346586	n:1370000
KS ci ratio: 1.173996e-01	ci left: 7.653933e-04	ci right 8.615547e-04	k: 1113	n:1370000
POU4F2   1370000 perm   934 sec   (1466 perm/sec)   p_kst 8.124088e-04   p_cons 9.829095e-01   p_joint 8.124088e-04

Joint ci ratio: 1.169282e-01	ci left: 7.661776e-04	ci right 8.620243e-04	k: 1122	n:1380000
Cons ci ratio: 4.400434e-04	ci left: 9.826903e-01	ci right 9.831236e-01	k: 1356413	n:1380000
KS ci ratio: 1.169282e-01	ci left: 7.661776e-04	ci right 8.620243e-04	k: 1122	n:1380000
POU4F2   1380000 perm   946 sec   (1458 perm/sec)   p_kst 8.130435e-04   p_cons 9.829080e-01   p_joint 8.130435e-04

Joint ci ratio: 1.166172e-01	ci left: 7.648560e-04	ci right 8.602653e-04	k: 1128	n:1390000
Cons ci ratio: 4.386273e-04	ci left: 9.826780e-01	ci right 9.831099e-01	k: 1366224	n:1390000
KS ci ratio: 1.166172e-01	ci left: 7.648560e-04	ci right 8.602653e-04	k: 1128	n:1390000
POU4F2   1390000 perm   958 sec   (1451 perm/sec)   p_kst 8.115108e-04   p_cons 9.828950e-01   p_joint 8.115108e-04

Joint ci ratio: 1.163599e-01	ci left: 7.628601e-04	ci right 8.577960e-04	k: 1133	n:1400000
Cons ci ratio: 4.371595e-04	ci left: 9.826710e-01	ci right 9.831013e-01	k: 1376042	n:1400000
KS ci ratio: 1.163599e-01	ci left: 7.628601e-04	ci right 8.577960e-04	k: 1133	n:1400000
POU4F2   1400000 perm   970 sec   (1443 perm/sec)   p_kst 8.092857e-04   p_cons 9.828871e-01   p_joint 8.092857e-04

Joint ci ratio: 1.157489e-01	ci left: 7.657134e-04	ci right 8.604699e-04	k: 1145	n:1410000
Cons ci ratio: 4.355502e-04	ci left: 9.826761e-01	ci right 9.831049e-01	k: 1385877	n:1410000
KS ci ratio: 1.157489e-01	ci left: 7.657134e-04	ci right 8.604699e-04	k: 1145	n:1410000
POU4F2   1410000 perm   982 sec   (1436 perm/sec)   p_kst 8.120567e-04   p_cons 9.828915e-01   p_joint 8.120567e-04

Joint ci ratio: 1.153470e-01	ci left: 7.657920e-04	ci right 8.602068e-04	k: 1153	n:1420000
Cons ci ratio: 4.340948e-04	ci left: 9.826705e-01	ci right 9.830979e-01	k: 1395697	n:1420000
KS ci ratio: 1.153470e-01	ci left: 7.657920e-04	ci right 8.602068e-04	k: 1153	n:1420000
POU4F2   1420000 perm   994 sec   (1429 perm/sec)   p_kst 8.119718e-04   p_cons 9.828852e-01   p_joint 8.119718e-04

Joint ci ratio: 1.148998e-01	ci left: 7.665493e-04	ci right 8.606662e-04	k: 1162	n:1430000
Cons ci ratio: 4.326808e-04	ci left: 9.826630e-01	ci right 9.830889e-01	k: 1405514	n:1430000
KS ci ratio: 1.148998e-01	ci left: 7.665493e-04	ci right 8.606662e-04	k: 1162	n:1430000
POU4F2   1430000 perm   1006 sec   (1421 perm/sec)   p_kst 8.125874e-04   p_cons 9.828769e-01   p_joint 8.125874e-04

Joint ci ratio: 1.143602e-01	ci left: 7.686460e-04	ci right 8.625471e-04	k: 1173	n:1440000
Cons ci ratio: 4.310136e-04	ci left: 9.826765e-01	ci right 9.831008e-01	k: 1415361	n:1440000
KS ci ratio: 1.143602e-01	ci left: 7.686460e-04	ci right 8.625471e-04	k: 1173	n:1440000
POU4F2   1440000 perm   1018 sec   (1414 perm/sec)   p_kst 8.145833e-04   p_cons 9.828896e-01   p_joint 8.145833e-04

Joint ci ratio: 1.138761e-01	ci left: 7.700447e-04	ci right 8.636918e-04	k: 1183	n:1450000
Cons ci ratio: 4.296383e-04	ci left: 9.826682e-01	ci right 9.830912e-01	k: 1425177	n:1450000
KS ci ratio: 1.138761e-01	ci left: 7.700447e-04	ci right 8.636918e-04	k: 1183	n:1450000
POU4F2   1450000 perm   1030 sec   (1408 perm/sec)   p_kst 8.158621e-04   p_cons 9.828807e-01   p_joint 8.158621e-04

Joint ci ratio: 1.133982e-01	ci left: 7.714251e-04	ci right 8.648200e-04	k: 1193	n:1460000
Cons ci ratio: 4.281539e-04	ci left: 9.826698e-01	ci right 9.830913e-01	k: 1435007	n:1460000
KS ci ratio: 1.133982e-01	ci left: 7.714251e-04	ci right 8.648200e-04	k: 1193	n:1460000
POU4F2   1460000 perm   1042 sec   (1401 perm/sec)   p_kst 8.171233e-04   p_cons 9.828815e-01   p_joint 8.171233e-04

Joint ci ratio: 1.127857e-01	ci left: 7.747707e-04	ci right 8.680304e-04	k: 1206	n:1470000
Cons ci ratio: 4.267711e-04	ci left: 9.826645e-01	ci right 9.830846e-01	k: 1444827	n:1470000
KS ci ratio: 1.127857e-01	ci left: 7.747707e-04	ci right 8.680304e-04	k: 1206	n:1470000
POU4F2   1470000 perm   1055 sec   (1394 perm/sec)   p_kst 8.204082e-04   p_cons 9.828755e-01   p_joint 8.204082e-04

Joint ci ratio: 1.124138e-01	ci left: 7.747890e-04	ci right 8.677229e-04	k: 1214	n:1480000
Cons ci ratio: 4.252308e-04	ci left: 9.826729e-01	ci right 9.830915e-01	k: 1454667	n:1480000
KS ci ratio: 1.124138e-01	ci left: 7.747890e-04	ci right 8.677229e-04	k: 1214	n:1480000
POU4F2   1480000 perm   1067 sec   (1387 perm/sec)   p_kst 8.202703e-04   p_cons 9.828831e-01   p_joint 8.202703e-04

Joint ci ratio: 1.119082e-01	ci left: 7.767645e-04	ci right 8.694887e-04	k: 1225	n:1490000
Cons ci ratio: 4.238422e-04	ci left: 9.826703e-01	ci right 9.830875e-01	k: 1464491	n:1490000
KS ci ratio: 1.119082e-01	ci left: 7.767645e-04	ci right 8.694887e-04	k: 1225	n:1490000
POU4F2   1490000 perm   1079 sec   (1380 perm/sec)   p_kst 8.221477e-04   p_cons 9.828799e-01   p_joint 8.221477e-04

Joint ci ratio: 1.116808e-01	ci left: 7.748262e-04	ci right 8.671187e-04	k: 1230	n:1500000
Cons ci ratio: 4.222914e-04	ci left: 9.826819e-01	ci right 9.830976e-01	k: 1474336	n:1500000
KS ci ratio: 1.116808e-01	ci left: 7.748262e-04	ci right 8.671187e-04	k: 1230	n:1500000
POU4F2   1500000 perm   1092 sec   (1374 perm/sec)   p_kst 8.200000e-04   p_cons 9.828907e-01   p_joint 8.200000e-04

Joint ci ratio: 1.110956e-01	ci left: 7.780644e-04	ci right 8.702251e-04	k: 1243	n:1510000
Cons ci ratio: 4.207822e-04	ci left: 9.826913e-01	ci right 9.831055e-01	k: 1484178	n:1510000
KS ci ratio: 1.110956e-01	ci left: 7.780644e-04	ci right 8.702251e-04	k: 1243	n:1510000
POU4F2   1510000 perm   1105 sec   (1367 perm/sec)   p_kst 8.231788e-04   p_cons 9.828993e-01   p_joint 8.231788e-04

Joint ci ratio: 1.106958e-01	ci left: 7.787024e-04	ci right 8.705852e-04	k: 1252	n:1520000
Cons ci ratio: 4.193054e-04	ci left: 9.826993e-01	ci right 9.831120e-01	k: 1494018	n:1520000
KS ci ratio: 1.106958e-01	ci left: 7.787024e-04	ci right 8.705852e-04	k: 1252	n:1520000
POU4F2   1520000 perm   1118 sec   (1359 perm/sec)   p_kst 8.236842e-04   p_cons 9.829066e-01   p_joint 8.236842e-04

Joint ci ratio: 1.103442e-01	ci left: 7.786970e-04	ci right 8.702683e-04	k: 1260	n:1530000
Cons ci ratio: 4.177626e-04	ci left: 9.827137e-01	ci right 9.831250e-01	k: 1503868	n:1530000
KS ci ratio: 1.103442e-01	ci left: 7.786970e-04	ci right 8.702683e-04	k: 1260	n:1530000
POU4F2   1530000 perm   1132 sec   (1351 perm/sec)   p_kst 8.235294e-04   p_cons 9.829203e-01   p_joint 8.235294e-04

Joint ci ratio: 1.101262e-01	ci left: 7.767977e-04	ci right 8.679535e-04	k: 1265	n:1540000
Cons ci ratio: 4.161962e-04	ci left: 9.827312e-01	ci right 9.831410e-01	k: 1513723	n:1540000
KS ci ratio: 1.101262e-01	ci left: 7.767977e-04	ci right 8.679535e-04	k: 1265	n:1540000
POU4F2   1540000 perm   1145 sec   (1345 perm/sec)   p_kst 8.214286e-04   p_cons 9.829370e-01   p_joint 8.214286e-04

Joint ci ratio: 1.096507e-01	ci left: 7.786879e-04	ci right 8.696455e-04	k: 1276	n:1550000
Cons ci ratio: 4.149102e-04	ci left: 9.827271e-01	ci right 9.831356e-01	k: 1523545	n:1550000
KS ci ratio: 1.096507e-01	ci left: 7.786879e-04	ci right 8.696455e-04	k: 1276	n:1550000
POU4F2   1550000 perm   1158 sec   (1339 perm/sec)   p_kst 8.232258e-04   p_cons 9.829323e-01   p_joint 8.232258e-04

Joint ci ratio: 1.092663e-01	ci left: 7.793076e-04	ci right 8.699980e-04	k: 1285	n:1560000
Cons ci ratio: 4.133515e-04	ci left: 9.827463e-01	ci right 9.831532e-01	k: 1533403	n:1560000
KS ci ratio: 1.092663e-01	ci left: 7.793076e-04	ci right 8.699980e-04	k: 1285	n:1560000
POU4F2   1560000 perm   1171 sec   (1332 perm/sec)   p_kst 8.237179e-04   p_cons 9.829506e-01   p_joint 8.237179e-04

Joint ci ratio: 1.089702e-01	ci left: 7.786808e-04	ci right 8.690368e-04	k: 1292	n:1570000
Cons ci ratio: 4.118646e-04	ci left: 9.827607e-01	ci right 9.831662e-01	k: 1543254	n:1570000
KS ci ratio: 1.089702e-01	ci left: 7.786808e-04	ci right 8.690368e-04	k: 1292	n:1570000
POU4F2   1570000 perm   1184 sec   (1326 perm/sec)   p_kst 8.229299e-04   p_cons 9.829643e-01   p_joint 8.229299e-04

Joint ci ratio: 1.086347e-01	ci left: 7.786779e-04	ci right 8.687376e-04	k: 1300	n:1580000
Cons ci ratio: 4.105874e-04	ci left: 9.827590e-01	ci right 9.831632e-01	k: 1553080	n:1580000
KS ci ratio: 1.086347e-01	ci left: 7.786779e-04	ci right 8.687376e-04	k: 1300	n:1580000
POU4F2   1580000 perm   1197 sec   (1320 perm/sec)   p_kst 8.227848e-04   p_cons 9.829620e-01   p_joint 8.227848e-04

Joint ci ratio: 1.082608e-01	ci left: 7.792874e-04	ci right 8.690877e-04	k: 1309	n:1590000
Cons ci ratio: 4.092759e-04	ci left: 9.827612e-01	ci right 9.831641e-01	k: 1562912	n:1590000
KS ci ratio: 1.082608e-01	ci left: 7.792874e-04	ci right 8.690877e-04	k: 1309	n:1590000
POU4F2   1590000 perm   1211 sec   (1313 perm/sec)   p_kst 8.232704e-04   p_cons 9.829635e-01   p_joint 8.232704e-04

Joint ci ratio: 1.080138e-01	ci left: 7.780654e-04	ci right 8.675073e-04	k: 1315	n:1600000
Cons ci ratio: 4.079388e-04	ci left: 9.827664e-01	ci right 9.831681e-01	k: 1572749	n:1600000
KS ci ratio: 1.080138e-01	ci left: 7.780654e-04	ci right 8.675073e-04	k: 1315	n:1600000
POU4F2   1600000 perm   1225 sec   (1307 perm/sec)   p_kst 8.218750e-04   p_cons 9.829681e-01   p_joint 8.218750e-04

Joint ci ratio: 1.075651e-01	ci left: 7.798809e-04	ci right 8.691355e-04	k: 1326	n:1610000
Cons ci ratio: 4.067203e-04	ci left: 9.827629e-01	ci right 9.831633e-01	k: 1582572	n:1610000
KS ci ratio: 1.075651e-01	ci left: 7.798809e-04	ci right 8.691355e-04	k: 1326	n:1610000
POU4F2   1610000 perm   1238 sec   (1300 perm/sec)   p_kst 8.236025e-04   p_cons 9.829640e-01   p_joint 8.236025e-04

Joint ci ratio: 1.074035e-01	ci left: 7.774695e-04	ci right 8.663060e-04	k: 1330	n:1620000
Cons ci ratio: 4.054454e-04	ci left: 9.827650e-01	ci right 9.831641e-01	k: 1592404	n:1620000
KS ci ratio: 1.074035e-01	ci left: 7.774695e-04	ci right 8.663060e-04	k: 1330	n:1620000
POU4F2   1620000 perm   1252 sec   (1294 perm/sec)   p_kst 8.209877e-04   p_cons 9.829654e-01   p_joint 8.209877e-04

Joint ci ratio: 1.069225e-01	ci left: 7.798644e-04	ci right 8.685504e-04	k: 1342	n:1630000
Cons ci ratio: 4.042416e-04	ci left: 9.827621e-01	ci right 9.831601e-01	k: 1602228	n:1630000
KS ci ratio: 1.069225e-01	ci left: 7.798644e-04	ci right 8.685504e-04	k: 1342	n:1630000
POU4F2   1630000 perm   1265 sec   (1288 perm/sec)   p_kst 8.233129e-04   p_cons 9.829620e-01   p_joint 8.233129e-04

Joint ci ratio: 1.066449e-01	ci left: 7.792635e-04	ci right 8.676366e-04	k: 1349	n:1640000
Cons ci ratio: 4.029384e-04	ci left: 9.827685e-01	ci right 9.831652e-01	k: 1612067	n:1640000
KS ci ratio: 1.066449e-01	ci left: 7.792635e-04	ci right 8.676366e-04	k: 1349	n:1640000
POU4F2   1640000 perm   1279 sec   (1282 perm/sec)   p_kst 8.225610e-04   p_cons 9.829677e-01   p_joint 8.225610e-04

Joint ci ratio: 1.063304e-01	ci left: 7.792600e-04	ci right 8.673558e-04	k: 1357	n:1650000
Cons ci ratio: 4.016622e-04	ci left: 9.827736e-01	ci right 9.831690e-01	k: 1621904	n:1650000
KS ci ratio: 1.063304e-01	ci left: 7.792600e-04	ci right 8.673558e-04	k: 1357	n:1650000
POU4F2   1650000 perm   1293 sec   (1276 perm/sec)   p_kst 8.224242e-04   p_cons 9.829721e-01   p_joint 8.224242e-04

Joint ci ratio: 1.061352e-01	ci left: 7.774977e-04	ci right 8.652228e-04	k: 1362	n:1660000
Cons ci ratio: 4.005710e-04	ci left: 9.827640e-01	ci right 9.831584e-01	k: 1631717	n:1660000
KS ci ratio: 1.061352e-01	ci left: 7.774977e-04	ci right 8.652228e-04	k: 1362	n:1660000
POU4F2   1660000 perm   1307 sec   (1270 perm/sec)   p_kst 8.204819e-04   p_cons 9.829620e-01   p_joint 8.204819e-04

Joint ci ratio: 1.058251e-01	ci left: 7.775054e-04	ci right 8.649592e-04	k: 1370	n:1670000
Cons ci ratio: 3.994028e-04	ci left: 9.827619e-01	ci right 9.831550e-01	k: 1641542	n:1670000
KS ci ratio: 1.058251e-01	ci left: 7.775054e-04	ci right 8.649592e-04	k: 1370	n:1670000
POU4F2   1670000 perm   1321 sec   (1264 perm/sec)   p_kst 8.203593e-04   p_cons 9.829593e-01   p_joint 8.203593e-04

Joint ci ratio: 1.055561e-01	ci left: 7.769339e-04	ci right 8.640874e-04	k: 1377	n:1680000
Cons ci ratio: 3.983014e-04	ci left: 9.827549e-01	ci right 9.831470e-01	k: 1651359	n:1680000
KS ci ratio: 1.055561e-01	ci left: 7.769339e-04	ci right 8.640874e-04	k: 1377	n:1680000
POU4F2   1680000 perm   1335 sec   (1258 perm/sec)   p_kst 8.196429e-04   p_cons 9.829518e-01   p_joint 8.196429e-04

Joint ci ratio: 1.052510e-01	ci left: 7.769456e-04	ci right 8.638329e-04	k: 1385	n:1690000
Cons ci ratio: 3.972230e-04	ci left: 9.827469e-01	ci right 9.831379e-01	k: 1661174	n:1690000
KS ci ratio: 1.052510e-01	ci left: 7.769456e-04	ci right 8.638329e-04	k: 1385	n:1690000
POU4F2   1690000 perm   1349 sec   (1253 perm/sec)   p_kst 8.195266e-04   p_cons 9.829432e-01   p_joint 8.195266e-04

Joint ci ratio: 1.050240e-01	ci left: 7.758119e-04	ci right 8.623738e-04	k: 1391	n:1700000
Cons ci ratio: 3.959934e-04	ci left: 9.827525e-01	ci right 9.831423e-01	k: 1671012	n:1700000
KS ci ratio: 1.050240e-01	ci left: 7.758119e-04	ci right 8.623738e-04	k: 1391	n:1700000
POU4F2   1700000 perm   1363 sec   (1247 perm/sec)   p_kst 8.182353e-04   p_cons 9.829482e-01   p_joint 8.182353e-04

Joint ci ratio: 1.048360e-01	ci left: 7.741222e-04	ci right 8.603314e-04	k: 1396	n:1710000
Cons ci ratio: 3.948991e-04	ci left: 9.827475e-01	ci right 9.831362e-01	k: 1680832	n:1710000
KS ci ratio: 1.048360e-01	ci left: 7.741222e-04	ci right 8.603314e-04	k: 1396	n:1710000
POU4F2   1710000 perm   1378 sec   (1241 perm/sec)   p_kst 8.163743e-04   p_cons 9.829427e-01   p_joint 8.163743e-04

Joint ci ratio: 1.045743e-01	ci left: 7.735847e-04	ci right 8.595058e-04	k: 1403	n:1720000
Cons ci ratio: 3.938820e-04	ci left: 9.827367e-01	ci right 9.831244e-01	k: 1690642	n:1720000
KS ci ratio: 1.045743e-01	ci left: 7.735847e-04	ci right 8.595058e-04	k: 1403	n:1720000
POU4F2   1720000 perm   1392 sec   (1235 perm/sec)   p_kst 8.156977e-04   p_cons 9.829314e-01   p_joint 8.156977e-04

Joint ci ratio: 1.041670e-01	ci left: 7.753055e-04	ci right 8.610618e-04	k: 1414	n:1730000
Cons ci ratio: 3.927846e-04	ci left: 9.827336e-01	ci right 9.831203e-01	k: 1700465	n:1730000
KS ci ratio: 1.041670e-01	ci left: 7.753055e-04	ci right 8.610618e-04	k: 1414	n:1730000
POU4F2   1730000 perm   1407 sec   (1230 perm/sec)   p_kst 8.173410e-04   p_cons 9.829277e-01   p_joint 8.173410e-04

Joint ci ratio: 1.038372e-01	ci left: 7.758877e-04	ci right 8.614201e-04	k: 1423	n:1740000
Cons ci ratio: 3.915354e-04	ci left: 9.827444e-01	ci right 9.831298e-01	k: 1710312	n:1740000
KS ci ratio: 1.038372e-01	ci left: 7.758877e-04	ci right 8.614201e-04	k: 1423	n:1740000
POU4F2   1740000 perm   1421 sec   (1225 perm/sec)   p_kst 8.178161e-04   p_cons 9.829379e-01   p_joint 8.178161e-04

Joint ci ratio: 1.035106e-01	ci left: 7.764635e-04	ci right 8.617738e-04	k: 1432	n:1750000
Cons ci ratio: 3.903445e-04	ci left: 9.827511e-01	ci right 9.831353e-01	k: 1720152	n:1750000
KS ci ratio: 1.035106e-01	ci left: 7.764635e-04	ci right 8.617738e-04	k: 1432	n:1750000
POU4F2   1750000 perm   1435 sec   (1219 perm/sec)   p_kst 8.182857e-04   p_cons 9.829440e-01   p_joint 8.182857e-04

Joint ci ratio: 1.032947e-01	ci left: 7.753727e-04	ci right 8.603746e-04	k: 1438	n:1760000
Cons ci ratio: 3.892632e-04	ci left: 9.827491e-01	ci right 9.831323e-01	k: 1729977	n:1760000
KS ci ratio: 1.032947e-01	ci left: 7.753727e-04	ci right 8.603746e-04	k: 1438	n:1760000
POU4F2   1760000 perm   1450 sec   (1214 perm/sec)   p_kst 8.170455e-04   p_cons 9.829415e-01   p_joint 8.170455e-04

Joint ci ratio: 1.028311e-01	ci left: 7.781474e-04	ci right 8.630476e-04	k: 1451	n:1770000
Cons ci ratio: 3.880928e-04	ci left: 9.827557e-01	ci right 9.831377e-01	k: 1739817	n:1770000
KS ci ratio: 1.028311e-01	ci left: 7.781474e-04	ci right 8.630476e-04	k: 1451	n:1770000
POU4F2   1770000 perm   1465 sec   (1209 perm/sec)   p_kst 8.197740e-04   p_cons 9.829475e-01   p_joint 8.197740e-04

Joint ci ratio: 1.026193e-01	ci left: 7.770600e-04	ci right 8.616564e-04	k: 1457	n:1780000
Cons ci ratio: 3.870755e-04	ci left: 9.827497e-01	ci right 9.831307e-01	k: 1749635	n:1780000
KS ci ratio: 1.026193e-01	ci left: 7.770600e-04	ci right 8.616564e-04	k: 1457	n:1780000
POU4F2   1780000 perm   1479 sec   (1203 perm/sec)   p_kst 8.185393e-04   p_cons 9.829410e-01   p_joint 8.185393e-04

Joint ci ratio: 1.023041e-01	ci left: 7.776180e-04	ci right 8.619994e-04	k: 1466	n:1790000
Cons ci ratio: 3.861882e-04	ci left: 9.827332e-01	ci right 9.831133e-01	k: 1759434	n:1790000
KS ci ratio: 1.023041e-01	ci left: 7.776180e-04	ci right 8.619994e-04	k: 1466	n:1790000
POU4F2   1790000 perm   1494 sec   (1198 perm/sec)   p_kst 8.189944e-04   p_cons 9.829240e-01   p_joint 8.189944e-04

Joint ci ratio: 1.020609e-01	ci left: 7.770874e-04	ci right 8.611987e-04	k: 1473	n:1800000
Cons ci ratio: 3.850326e-04	ci left: 9.827408e-01	ci right 9.831198e-01	k: 1769276	n:1800000
KS ci ratio: 1.020609e-01	ci left: 7.770874e-04	ci right 8.611987e-04	k: 1473	n:1800000
POU4F2   1800000 perm   1509 sec   (1193 perm/sec)   p_kst 8.183333e-04   p_cons 9.829311e-01   p_joint 8.183333e-04

Joint ci ratio: 1.017164e-01	ci left: 7.781782e-04	ci right 8.621063e-04	k: 1483	n:1810000
Cons ci ratio: 3.839884e-04	ci left: 9.827395e-01	ci right 9.831175e-01	k: 1779102	n:1810000
KS ci ratio: 1.017164e-01	ci left: 7.781782e-04	ci right 8.621063e-04	k: 1483	n:1810000
POU4F2   1810000 perm   1524 sec   (1187 perm/sec)   p_kst 8.193370e-04   p_cons 9.829293e-01   p_joint 8.193370e-04

Joint ci ratio: 1.015114e-01	ci left: 7.771154e-04	ci right 8.607499e-04	k: 1489	n:1820000
Cons ci ratio: 3.828899e-04	ci left: 9.827438e-01	ci right 9.831206e-01	k: 1788938	n:1820000
KS ci ratio: 1.015114e-01	ci left: 7.771154e-04	ci right 8.607499e-04	k: 1489	n:1820000
POU4F2   1820000 perm   1540 sec   (1182 perm/sec)   p_kst 8.181319e-04   p_cons 9.829330e-01   p_joint 8.181319e-04

Joint ci ratio: 1.011387e-01	ci left: 7.787275e-04	ci right 8.622095e-04	k: 1500	n:1830000
Cons ci ratio: 3.819501e-04	ci left: 9.827348e-01	ci right 9.831107e-01	k: 1798750	n:1830000
KS ci ratio: 1.011387e-01	ci left: 7.787275e-04	ci right 8.622095e-04	k: 1500	n:1830000
POU4F2   1830000 perm   1555 sec   (1177 perm/sec)   p_kst 8.196721e-04   p_cons 9.829235e-01   p_joint 8.196721e-04

Joint ci ratio: 1.008368e-01	ci left: 7.792630e-04	ci right 8.625384e-04	k: 1509	n:1840000
Cons ci ratio: 3.808813e-04	ci left: 9.827379e-01	ci right 9.831128e-01	k: 1808584	n:1840000
KS ci ratio: 1.008368e-01	ci left: 7.792630e-04	ci right 8.625384e-04	k: 1509	n:1840000
POU4F2   1840000 perm   1571 sec   (1172 perm/sec)   p_kst 8.201087e-04   p_cons 9.829261e-01   p_joint 8.201087e-04

Joint ci ratio: 1.006039e-01	ci left: 7.787393e-04	ci right 8.617551e-04	k: 1516	n:1850000
Cons ci ratio: 3.799805e-04	ci left: 9.827268e-01	ci right 9.831008e-01	k: 1818392	n:1850000
KS ci ratio: 1.006039e-01	ci left: 7.787393e-04	ci right 8.617551e-04	k: 1516	n:1850000
POU4F2   1850000 perm   1586 sec   (1167 perm/sec)   p_kst 8.194595e-04   p_cons 9.829146e-01   p_joint 8.194595e-04

Joint ci ratio: 1.003397e-01	ci left: 7.787455e-04	ci right 8.615311e-04	k: 1524	n:1860000
Cons ci ratio: 3.790738e-04	ci left: 9.827170e-01	ci right 9.830901e-01	k: 1828202	n:1860000
KS ci ratio: 1.003397e-01	ci left: 7.787455e-04	ci right 8.615311e-04	k: 1524	n:1860000
POU4F2   1860000 perm   1601 sec   (1162 perm/sec)   p_kst 8.193548e-04   p_cons 9.829043e-01   p_joint 8.193548e-04

Joint ci ratio: 1.001757e-01	ci left: 7.771878e-04	ci right 8.596649e-04	k: 1529	n:1870000
Cons ci ratio: 3.779689e-04	ci left: 9.827255e-01	ci right 9.830976e-01	k: 1838046	n:1870000
KS ci ratio: 1.001757e-01	ci left: 7.771878e-04	ci right 8.596649e-04	k: 1529	n:1870000
POU4F2   1870000 perm   1616 sec   (1157 perm/sec)   p_kst 8.176471e-04   p_cons 9.829123e-01   p_joint 8.176471e-04

Joint ci ratio: 9.984990e-02	ci left: 7.782399e-04	ci right 8.605443e-04	k: 1539	n:1880000
Cons ci ratio: 3.769451e-04	ci left: 9.827276e-01	ci right 9.830986e-01	k: 1847878	n:1880000
KS ci ratio: 9.984990e-02	ci left: 7.782399e-04	ci right 8.605443e-04	k: 1539	n:1880000
POU4F2   1880000 perm   1632 sec   (1152 perm/sec)   p_kst 8.186170e-04   p_cons 9.829138e-01   p_joint 8.186170e-04

Outputting figure to mutsig2_images.part000000000135/POU4F2.2_1238_1880000_0.00081862_0.98291_0.00081862.png
                gene_name: POU4F2
               theta_stop: 0.100 
                    nperm: 1880000 
                     p_ks: 0.00082 
        ci_ks_bounds_left: 0.00078 
       ci_ks_bounds_right: 0.00086 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.00082 
     ci_joint_bounds_left: 0.00078 
    ci_joint_bounds_right: 0.00086 

Current progress: 67 percent done.
PPEF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.208602e-02	ci left: 3.520751e-01	ci right 3.710056e-01	k: 3615	n:10000
KS ci ratio: 1.009287e-02	ci left: 9.329910e-01	ci right 9.425521e-01	k: 9379	n:10000
PPEF1   10000 perm   2 sec   (6350 perm/sec)   p_kst 9.379000e-01   p_cons 3.615000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000135/PPEF1.2_2026_10000_0.9379_0.3615_1.png
                gene_name: PPEF1
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.93 
       ci_ks_bounds_right: 0.94 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
PPIL6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.011330e+00	ci left: 7.655977e-04	ci right 2.347848e-03	k: 14	n:10000
Cons ci ratio: 1.893089e-02	ci left: 8.030849e-01	ci right 8.185336e-01	k: 8109	n:10000
KS ci ratio: 1.306013e+00	ci left: 3.454445e-04	ci right 1.575707e-03	k: 8	n:10000
PPIL6   10000 perm   1 sec   (6812 perm/sec)   p_kst 8.000000e-04   p_cons 8.109000e-01   p_joint 1.400000e-03

Joint ci ratio: 7.538762e-01	ci left: 8.493734e-04	ci right 1.904225e-03	k: 26	n:20000
Cons ci ratio: 1.357531e-02	ci left: 8.010062e-01	ci right 8.120045e-01	k: 16131	n:20000
KS ci ratio: 7.996665e-01	ci left: 7.291366e-04	ci right 1.725068e-03	k: 23	n:20000
PPIL6   20000 perm   3 sec   (6013 perm/sec)   p_kst 1.150000e-03   p_cons 8.065500e-01   p_joint 1.300000e-03

Joint ci ratio: 5.839110e-01	ci left: 1.065878e-03	ci right 1.968437e-03	k: 44	n:30000
Cons ci ratio: 1.103140e-02	ci left: 8.035302e-01	ci right 8.124767e-01	k: 24241	n:30000
KS ci ratio: 6.718822e-01	ci left: 7.573066e-04	ci right 1.544465e-03	k: 33	n:30000
PPIL6   30000 perm   5 sec   (5718 perm/sec)   p_kst 1.100000e-03   p_cons 8.080333e-01   p_joint 1.466667e-03

Joint ci ratio: 5.234587e-01	ci left: 1.036001e-03	ci right 1.789380e-03	k: 55	n:40000
Cons ci ratio: 9.521350e-03	ci left: 8.051885e-01	ci right 8.129166e-01	k: 32363	n:40000
KS ci ratio: 6.045440e-01	ci left: 7.356550e-04	ci right 1.390274e-03	k: 41	n:40000
PPIL6   40000 perm   7 sec   (5522 perm/sec)   p_kst 1.025000e-03   p_cons 8.090750e-01   p_joint 1.375000e-03

Joint ci ratio: 5.015933e-01	ci left: 9.158475e-04	ci right 1.544372e-03	k: 60	n:50000
Cons ci ratio: 8.502211e-03	ci left: 8.061106e-01	ci right 8.130135e-01	k: 40479	n:50000
KS ci ratio: 5.655260e-01	ci left: 6.907559e-04	ci right 1.249807e-03	k: 47	n:50000
PPIL6   50000 perm   9 sec   (5367 perm/sec)   p_kst 9.400000e-04   p_cons 8.095800e-01   p_joint 1.200000e-03

Joint ci ratio: 5.283260e-01	ci left: 6.761778e-04	ci right 1.174144e-03	k: 54	n:60000
Cons ci ratio: 7.772230e-03	ci left: 8.059824e-01	ci right 8.122877e-01	k: 48549	n:60000
KS ci ratio: 5.283260e-01	ci left: 6.761778e-04	ci right 1.174144e-03	k: 54	n:60000
PPIL6   60000 perm   11 sec   (5235 perm/sec)   p_kst 9.000000e-04   p_cons 8.091500e-01   p_joint 9.000000e-04

Joint ci ratio: 3.804530e-01	ci left: 1.227010e-03	ci right 1.815555e-03	k: 105	n:70000
Cons ci ratio: 6.871805e-03	ci left: 8.201233e-01	ci right 8.257927e-01	k: 57608	n:70000
KS ci ratio: 4.859869e-01	ci left: 7.041804e-04	ci right 1.167375e-03	k: 64	n:70000
PPIL6   70000 perm   14 sec   (5118 perm/sec)   p_kst 9.142857e-04   p_cons 8.229714e-01   p_joint 1.500000e-03

Joint ci ratio: 3.030200e-01	ci left: 1.771604e-03	ci right 2.415360e-03	k: 166	n:80000
Cons ci ratio: 6.427898e-03	ci left: 8.203121e-01	ci right 8.256144e-01	k: 65838	n:80000
KS ci ratio: 4.436334e-01	ci left: 7.596623e-04	ci right 1.202815e-03	k: 77	n:80000
PPIL6   80000 perm   16 sec   (5008 perm/sec)   p_kst 9.625000e-04   p_cons 8.229750e-01   p_joint 2.075000e-03

Joint ci ratio: 3.503700e-01	ci left: 1.146091e-03	ci right 1.642497e-03	k: 124	n:90000
Cons ci ratio: 6.066224e-03	ci left: 8.201777e-01	ci right 8.251793e-01	k: 74042	n:90000
KS ci ratio: 4.225001e-01	ci left: 7.544562e-04	ci right 1.167690e-03	k: 85	n:90000
PPIL6   90000 perm   18 sec   (4907 perm/sec)   p_kst 9.444444e-04   p_cons 8.226889e-01   p_joint 1.377778e-03

Joint ci ratio: 3.177107e-01	ci left: 1.278904e-03	ci right 1.770737e-03	k: 151	n:100000
Cons ci ratio: 5.760618e-03	ci left: 8.200170e-01	ci right 8.247643e-01	k: 82240	n:100000
KS ci ratio: 4.084982e-01	ci left: 7.327366e-04	ci right 1.117163e-03	k: 91	n:100000
PPIL6   100000 perm   21 sec   (4811 perm/sec)   p_kst 9.100000e-04   p_cons 8.224000e-01   p_joint 1.510000e-03

Joint ci ratio: 3.275922e-01	ci left: 1.087428e-03	ci right 1.521371e-03	k: 142	n:110000
Cons ci ratio: 5.485008e-03	ci left: 8.205305e-01	ci right 8.250525e-01	k: 90508	n:110000
KS ci ratio: 3.958016e-01	ci left: 7.151515e-04	ci right 1.075639e-03	k: 97	n:110000
PPIL6   110000 perm   23 sec   (4722 perm/sec)   p_kst 8.818182e-04   p_cons 8.228000e-01   p_joint 1.290909e-03

Joint ci ratio: 2.834142e-01	ci left: 1.366335e-03	ci right 1.824959e-03	k: 190	n:120000
Cons ci ratio: 5.261694e-03	ci left: 8.200583e-01	ci right 8.243928e-01	k: 98668	n:120000
KS ci ratio: 3.787901e-01	ci left: 7.232559e-04	ci right 1.068267e-03	k: 106	n:120000
PPIL6   120000 perm   26 sec   (4637 perm/sec)   p_kst 8.833333e-04   p_cons 8.222333e-01   p_joint 1.583333e-03

Joint ci ratio: 2.683728e-01	ci left: 1.418769e-03	ci right 1.865472e-03	k: 212	n:130000
Cons ci ratio: 5.059039e-03	ci left: 8.199251e-01	ci right 8.240913e-01	k: 106862	n:130000
KS ci ratio: 3.576788e-01	ci left: 7.583769e-04	ci right 1.095296e-03	k: 119	n:130000
PPIL6   130000 perm   29 sec   (4554 perm/sec)   p_kst 9.153846e-04   p_cons 8.220154e-01   p_joint 1.630769e-03

Joint ci ratio: 1.519940e-01	ci left: 4.369065e-03	ci right 5.094539e-03	k: 661	n:140000
Cons ci ratio: 4.875266e-03	ci left: 8.199861e-01	ci right 8.240006e-01	k: 115080	n:140000
KS ci ratio: 3.449765e-01	ci left: 7.628217e-04	ci right 1.086995e-03	k: 128	n:140000
PPIL6   140000 perm   31 sec   (4477 perm/sec)   p_kst 9.142857e-04   p_cons 8.220000e-01   p_joint 4.721429e-03

Joint ci ratio: 1.478155e-01	ci left: 4.321618e-03	ci right 5.017741e-03	k: 699	n:150000
Cons ci ratio: 4.720894e-03	ci left: 8.193718e-01	ci right 8.232557e-01	k: 123198	n:150000
KS ci ratio: 3.372269e-01	ci left: 7.485401e-04	ci right 1.057943e-03	k: 134	n:150000
PPIL6   150000 perm   34 sec   (4402 perm/sec)   p_kst 8.933333e-04   p_cons 8.213200e-01   p_joint 4.660000e-03

Joint ci ratio: 1.459640e-01	ci left: 4.159856e-03	ci right 4.820797e-03	k: 717	n:160000
Cons ci ratio: 4.566818e-03	ci left: 8.197026e-01	ci right 8.234608e-01	k: 131454	n:160000
KS ci ratio: 3.347637e-01	ci left: 7.131995e-04	ci right 1.005377e-03	k: 136	n:160000
PPIL6   160000 perm   37 sec   (4329 perm/sec)   p_kst 8.500000e-04   p_cons 8.215875e-01   p_joint 4.481250e-03

Joint ci ratio: 1.424406e-01	ci left: 4.119277e-03	ci right 4.756628e-03	k: 753	n:170000
Cons ci ratio: 4.433385e-03	ci left: 8.195650e-01	ci right 8.232123e-01	k: 139637	n:170000
KS ci ratio: 3.288207e-01	ci left: 6.982076e-04	ci right 9.780915e-04	k: 141	n:170000
PPIL6   170000 perm   40 sec   (4259 perm/sec)   p_kst 8.294118e-04   p_cons 8.213941e-01   p_joint 4.429412e-03

Joint ci ratio: 1.366635e-01	ci left: 4.238953e-03	ci right 4.866057e-03	k: 818	n:180000
Cons ci ratio: 4.312875e-03	ci left: 8.193159e-01	ci right 8.228626e-01	k: 147797	n:180000
KS ci ratio: 3.188704e-01	ci left: 7.053552e-04	ci right 9.778025e-04	k: 150	n:180000
PPIL6   180000 perm   43 sec   (4190 perm/sec)   p_kst 8.333333e-04   p_cons 8.210944e-01   p_joint 4.544444e-03

Joint ci ratio: 1.329028e-01	ci left: 4.254880e-03	ci right 4.865651e-03	k: 865	n:190000
Cons ci ratio: 4.199568e-03	ci left: 8.192423e-01	ci right 8.226952e-01	k: 155985	n:190000
KS ci ratio: 3.117279e-01	ci left: 7.021583e-04	ci right 9.660873e-04	k: 157	n:190000
PPIL6   190000 perm   46 sec   (4126 perm/sec)   p_kst 8.263158e-04   p_cons 8.209737e-01   p_joint 4.552632e-03

Joint ci ratio: 1.293651e-01	ci left: 4.274266e-03	ci right 4.870233e-03	k: 913	n:200000
Cons ci ratio: 4.095442e-03	ci left: 8.191271e-01	ci right 8.224936e-01	k: 164163	n:200000
KS ci ratio: 3.041240e-01	ci left: 7.039605e-04	ci right 9.608636e-04	k: 165	n:200000
PPIL6   200000 perm   49 sec   (4064 perm/sec)   p_kst 8.250000e-04   p_cons 8.208150e-01   p_joint 4.565000e-03

Joint ci ratio: 1.260958e-01	ci left: 4.292000e-03	ci right 4.874186e-03	k: 961	n:210000
Cons ci ratio: 3.994874e-03	ci left: 8.193058e-01	ci right 8.225901e-01	k: 172400	n:210000
KS ci ratio: 2.945203e-01	ci left: 7.188881e-04	ci right 9.714089e-04	k: 176	n:210000
PPIL6   210000 perm   52 sec   (4004 perm/sec)   p_kst 8.380952e-04   p_cons 8.209524e-01   p_joint 4.576190e-03

Joint ci ratio: 1.225756e-01	ci left: 4.343546e-03	ci right 4.915081e-03	k: 1017	n:220000
Cons ci ratio: 3.901367e-03	ci left: 8.194691e-01	ci right 8.226769e-01	k: 180637	n:220000
KS ci ratio: 2.880823e-01	ci left: 7.199185e-04	ci right 9.662670e-04	k: 184	n:220000
PPIL6   220000 perm   56 sec   (3943 perm/sec)   p_kst 8.363636e-04   p_cons 8.210773e-01   p_joint 4.622727e-03

Joint ci ratio: 1.198402e-01	ci left: 4.352849e-03	ci right 4.911921e-03	k: 1064	n:230000
Cons ci ratio: 3.816164e-03	ci left: 8.194620e-01	ci right 8.225995e-01	k: 188838	n:230000
KS ci ratio: 2.820487e-01	ci left: 7.209140e-04	ci right 9.615178e-04	k: 192	n:230000
PPIL6   230000 perm   59 sec   (3886 perm/sec)   p_kst 8.347826e-04   p_cons 8.210348e-01   p_joint 4.626087e-03

Joint ci ratio: 1.181370e-01	ci left: 4.296795e-03	ci right 4.840276e-03	k: 1095	n:240000
Cons ci ratio: 3.737580e-03	ci left: 8.193558e-01	ci right 8.224281e-01	k: 197015	n:240000
KS ci ratio: 2.763791e-01	ci left: 7.218758e-04	ci right 9.571156e-04	k: 200	n:240000
PPIL6   240000 perm   63 sec   (3831 perm/sec)   p_kst 8.333333e-04   p_cons 8.208958e-01   p_joint 4.562500e-03

Joint ci ratio: 9.297675e-02	ci left: 6.731615e-03	ci right 7.391891e-03	k: 1764	n:250000
Cons ci ratio: 3.664056e-03	ci left: 8.192267e-01	ci right 8.222379e-01	k: 205184	n:250000
KS ci ratio: 2.684790e-01	ci left: 7.377237e-04	ci right 9.700999e-04	k: 212	n:250000
PPIL6   250000 perm   66 sec   (3778 perm/sec)   p_kst 8.480000e-04   p_cons 8.207360e-01   p_joint 7.056000e-03

Joint ci ratio: 9.141226e-02	ci left: 6.701908e-03	ci right 7.347617e-03	k: 1825	n:260000
Cons ci ratio: 3.593012e-03	ci left: 8.192470e-01	ci right 8.221997e-01	k: 213389	n:260000
KS ci ratio: 2.623895e-01	ci left: 7.452528e-04	ci right 9.738025e-04	k: 222	n:260000
PPIL6   260000 perm   70 sec   (3725 perm/sec)   p_kst 8.538462e-04   p_cons 8.207269e-01   p_joint 7.019231e-03

Joint ci ratio: 8.923620e-02	ci left: 6.779505e-03	ci right 7.416330e-03	k: 1915	n:270000
Cons ci ratio: 3.525415e-03	ci left: 8.193109e-01	ci right 8.222081e-01	k: 221606	n:270000
KS ci ratio: 2.572495e-01	ci left: 7.488137e-04	ci right 9.732348e-04	k: 231	n:270000
PPIL6   270000 perm   73 sec   (3674 perm/sec)   p_kst 8.555556e-04   p_cons 8.207630e-01   p_joint 7.092593e-03

Joint ci ratio: 8.729615e-02	ci left: 6.837751e-03	ci right 7.465372e-03	k: 2001	n:280000
Cons ci ratio: 3.461075e-03	ci left: 8.194066e-01	ci right 8.222511e-01	k: 229833	n:280000
KS ci ratio: 2.513585e-01	ci left: 7.588531e-04	ci right 9.802598e-04	k: 242	n:280000
PPIL6   280000 perm   77 sec   (3624 perm/sec)   p_kst 8.642857e-04   p_cons 8.208321e-01   p_joint 7.146429e-03

Joint ci ratio: 1.007157e-01	ci left: 4.934738e-03	ci right 5.461432e-03	k: 1506	n:290000
Cons ci ratio: 3.399853e-03	ci left: 8.195203e-01	ci right 8.223147e-01	k: 238067	n:290000
KS ci ratio: 2.473207e-01	ci left: 7.585483e-04	ci right 9.757642e-04	k: 250	n:290000
PPIL6   290000 perm   81 sec   (3576 perm/sec)   p_kst 8.620690e-04   p_cons 8.209207e-01   p_joint 5.193103e-03

Joint ci ratio: 8.064979e-02	ci left: 7.498095e-03	ci right 8.131468e-03	k: 2343	n:300000
Cons ci ratio: 3.341276e-03	ci left: 8.196703e-01	ci right 8.224169e-01	k: 246314	n:300000
KS ci ratio: 2.406969e-01	ci left: 7.770781e-04	ci right 9.927515e-04	k: 264	n:300000
PPIL6   300000 perm   85 sec   (3528 perm/sec)   p_kst 8.800000e-04   p_cons 8.210467e-01   p_joint 7.810000e-03

Joint ci ratio: 8.175666e-02	ci left: 7.060217e-03	ci right 7.665176e-03	k: 2281	n:310000
Cons ci ratio: 3.285733e-03	ci left: 8.198012e-01	ci right 8.225025e-01	k: 254558	n:310000
KS ci ratio: 2.380186e-01	ci left: 7.702049e-04	ci right 9.812412e-04	k: 270	n:310000
PPIL6   310000 perm   89 sec   (3482 perm/sec)   p_kst 8.709677e-04   p_cons 8.211548e-01   p_joint 7.358065e-03

Joint ci ratio: 8.070433e-02	ci left: 7.023271e-03	ci right 7.616954e-03	k: 2341	n:320000
Cons ci ratio: 3.231596e-03	ci left: 8.200403e-01	ci right 8.226977e-01	k: 262839	n:320000
KS ci ratio: 2.345816e-01	ci left: 7.696560e-04	ci right 9.770548e-04	k: 278	n:320000
PPIL6   320000 perm   93 sec   (3437 perm/sec)   p_kst 8.687500e-04   p_cons 8.213719e-01   p_joint 7.315625e-03

Joint ci ratio: 7.962485e-02	ci left: 7.000493e-03	ci right 7.583967e-03	k: 2405	n:330000
Cons ci ratio: 3.180438e-03	ci left: 8.202287e-01	ci right 8.228445e-01	k: 271108	n:330000
KS ci ratio: 2.300888e-01	ci left: 7.777268e-04	ci right 9.827165e-04	k: 289	n:330000
PPIL6   330000 perm   97 sec   (3394 perm/sec)   p_kst 8.757576e-04   p_cons 8.215394e-01   p_joint 7.287879e-03

Joint ci ratio: 7.961679e-02	ci left: 6.797450e-03	ci right 7.363941e-03	k: 2406	n:340000
Cons ci ratio: 3.132262e-03	ci left: 8.203473e-01	ci right 8.229237e-01	k: 279357	n:340000
KS ci ratio: 2.277458e-01	ci left: 7.714873e-04	ci right 9.724708e-04	k: 295	n:340000
PPIL6   340000 perm   101 sec   (3352 perm/sec)   p_kst 8.676471e-04   p_cons 8.216382e-01   p_joint 7.076471e-03

Joint ci ratio: 9.202887e-02	ci left: 4.919728e-03	ci right 5.397093e-03	k: 1804	n:350000
Cons ci ratio: 3.086360e-03	ci left: 8.204450e-01	ci right 8.229839e-01	k: 287601	n:350000
KS ci ratio: 2.229022e-01	ci left: 7.844921e-04	ci right 9.839208e-04	k: 308	n:350000
PPIL6   350000 perm   106 sec   (3310 perm/sec)   p_kst 8.800000e-04   p_cons 8.217171e-01   p_joint 5.154286e-03

Joint ci ratio: 9.063310e-02	ci left: 4.935073e-03	ci right 5.406279e-03	k: 1860	n:360000
Cons ci ratio: 3.044091e-03	ci left: 8.203760e-01	ci right 8.228799e-01	k: 295787	n:360000
KS ci ratio: 2.186952e-01	ci left: 7.941911e-04	ci right 9.917628e-04	k: 320	n:360000
PPIL6   360000 perm   110 sec   (3269 perm/sec)   p_kst 8.888889e-04   p_cons 8.216306e-01   p_joint 5.166667e-03

Joint ci ratio: 8.948686e-02	ci left: 4.928500e-03	ci right 5.392815e-03	k: 1908	n:370000
Cons ci ratio: 3.000992e-03	ci left: 8.205577e-01	ci right 8.230265e-01	k: 304064	n:370000
KS ci ratio: 2.166804e-01	ci left: 7.880583e-04	ci right 9.820578e-04	k: 326	n:370000
PPIL6   370000 perm   115 sec   (3230 perm/sec)   p_kst 8.810811e-04   p_cons 8.217946e-01   p_joint 5.156757e-03

Joint ci ratio: 7.515783e-02	ci left: 6.840658e-03	ci right 7.377426e-03	k: 2700	n:380000
Cons ci ratio: 2.960362e-03	ci left: 8.206613e-01	ci right 8.230969e-01	k: 312315	n:380000
KS ci ratio: 2.147203e-01	ci left: 7.822562e-04	ci right 9.728557e-04	k: 332	n:380000
PPIL6   380000 perm   119 sec   (3192 perm/sec)   p_kst 8.736842e-04   p_cons 8.218816e-01   p_joint 7.105263e-03

Joint ci ratio: 8.731907e-02	ci left: 4.916467e-03	ci right 5.367856e-03	k: 2004	n:390000
Cons ci ratio: 2.922055e-03	ci left: 8.206879e-01	ci right 8.230920e-01	k: 320538	n:390000
KS ci ratio: 2.115667e-01	ci left: 7.864709e-04	ci right 9.749181e-04	k: 342	n:390000
PPIL6   390000 perm   124 sec   (3156 perm/sec)   p_kst 8.769231e-04   p_cons 8.218923e-01   p_joint 5.138462e-03

Joint ci ratio: 8.631376e-02	ci left: 4.908504e-03	ci right 5.353711e-03	k: 2051	n:400000
Cons ci ratio: 2.887218e-03	ci left: 8.205077e-01	ci right 8.228826e-01	k: 328679	n:400000
KS ci ratio: 2.076669e-01	ci left: 7.976037e-04	ci right 9.847480e-04	k: 355	n:400000
PPIL6   400000 perm   128 sec   (3119 perm/sec)   p_kst 8.875000e-04   p_cons 8.216975e-01   p_joint 5.127500e-03

Joint ci ratio: 8.522004e-02	ci left: 4.915280e-03	ci right 5.355173e-03	k: 2104	n:410000
Cons ci ratio: 2.853451e-03	ci left: 8.203513e-01	ci right 8.226978e-01	k: 336826	n:410000
KS ci ratio: 2.045305e-01	ci left: 8.035949e-04	ci right 9.889414e-04	k: 366	n:410000
PPIL6   410000 perm   133 sec   (3084 perm/sec)   p_kst 8.926829e-04   p_cons 8.215268e-01   p_joint 5.131707e-03

Joint ci ratio: 8.428474e-02	ci left: 4.907782e-03	ci right 5.341945e-03	k: 2151	n:420000
Cons ci ratio: 2.820222e-03	ci left: 8.202669e-01	ci right 8.225858e-01	k: 345000	n:420000
KS ci ratio: 2.023373e-01	ci left: 8.025390e-04	ci right 9.854118e-04	k: 374	n:420000
PPIL6   420000 perm   138 sec   (3049 perm/sec)   p_kst 8.904762e-04   p_cons 8.214286e-01   p_joint 5.121429e-03

Joint ci ratio: 7.062290e-02	ci left: 6.862632e-03	ci right 7.367300e-03	k: 3058	n:430000
Cons ci ratio: 2.788722e-03	ci left: 8.201236e-01	ci right 8.224162e-01	k: 353147	n:430000
KS ci ratio: 1.991749e-01	ci left: 8.103799e-04	ci right 9.918028e-04	k: 386	n:430000
PPIL6   430000 perm   143 sec   (3014 perm/sec)   p_kst 8.976744e-04   p_cons 8.212721e-01   p_joint 7.111628e-03

Joint ci ratio: 6.985104e-02	ci left: 6.858493e-03	ci right 7.357121e-03	k: 3126	n:440000
Cons ci ratio: 2.758167e-03	ci left: 8.199962e-01	ci right 8.222632e-01	k: 361298	n:440000
KS ci ratio: 1.968985e-01	ci left: 8.114026e-04	ci right 9.907292e-04	k: 395	n:440000
PPIL6   440000 perm   148 sec   (2982 perm/sec)   p_kst 8.977273e-04   p_cons 8.211318e-01   p_joint 7.104545e-03

Joint ci ratio: 6.914756e-02	ci left: 6.845831e-03	ci right 7.338325e-03	k: 3190	n:450000
Cons ci ratio: 2.727396e-03	ci left: 8.200037e-01	ci right 8.222455e-01	k: 369507	n:450000
KS ci ratio: 1.954243e-01	ci left: 8.060497e-04	ci right 9.827007e-04	k: 401	n:450000
PPIL6   450000 perm   152 sec   (2951 perm/sec)   p_kst 8.911111e-04   p_cons 8.211267e-01   p_joint 7.088889e-03

Joint ci ratio: 6.839089e-02	ci left: 6.848703e-03	ci right 7.335798e-03	k: 3261	n:460000
Cons ci ratio: 2.697034e-03	ci left: 8.200765e-01	ci right 8.222934e-01	k: 377746	n:460000
KS ci ratio: 1.932727e-01	ci left: 8.071401e-04	ci right 9.818536e-04	k: 410	n:460000
PPIL6   460000 perm   158 sec   (2918 perm/sec)   p_kst 8.913043e-04   p_cons 8.211870e-01   p_joint 7.089130e-03

Joint ci ratio: 6.752603e-02	ci left: 6.878676e-03	ci right 7.361473e-03	k: 3345	n:470000
Cons ci ratio: 2.668533e-03	ci left: 8.200503e-01	ci right 8.222436e-01	k: 385940	n:470000
KS ci ratio: 1.898383e-01	ci left: 8.203519e-04	ci right 9.944059e-04	k: 425	n:470000
PPIL6   470000 perm   163 sec   (2886 perm/sec)   p_kst 9.042553e-04   p_cons 8.211489e-01   p_joint 7.117021e-03

Joint ci ratio: 6.680113e-02	ci left: 6.884900e-03	ci right 7.362745e-03	k: 3418	n:480000
Cons ci ratio: 2.640392e-03	ci left: 8.200838e-01	ci right 8.222540e-01	k: 394162	n:480000
KS ci ratio: 1.878642e-01	ci left: 8.211249e-04	ci right 9.933245e-04	k: 434	n:480000
PPIL6   480000 perm   168 sec   (2855 perm/sec)   p_kst 9.041667e-04   p_cons 8.211708e-01   p_joint 7.120833e-03

Joint ci ratio: 6.607051e-02	ci left: 6.896918e-03	ci right 7.370162e-03	k: 3494	n:490000
Cons ci ratio: 2.613614e-03	ci left: 8.200608e-01	ci right 8.222089e-01	k: 402357	n:490000
KS ci ratio: 1.861604e-01	ci left: 8.199294e-04	ci right 9.901427e-04	k: 442	n:490000
PPIL6   490000 perm   173 sec   (2825 perm/sec)   p_kst 9.020408e-04   p_cons 8.211367e-01   p_joint 7.130612e-03

Joint ci ratio: 6.548351e-02	ci left: 6.882906e-03	ci right 7.350833e-03	k: 3557	n:500000
Cons ci ratio: 2.587194e-03	ci left: 8.200889e-01	ci right 8.222154e-01	k: 410577	n:500000
KS ci ratio: 1.847072e-01	ci left: 8.168808e-04	ci right 9.849892e-04	k: 449	n:500000
PPIL6   500000 perm   179 sec   (2789 perm/sec)   p_kst 8.980000e-04   p_cons 8.211540e-01   p_joint 7.114000e-03

Joint ci ratio: 6.493897e-02	ci left: 6.863673e-03	ci right 7.326267e-03	k: 3617	n:510000
Cons ci ratio: 2.560995e-03	ci left: 8.201809e-01	ci right 8.222860e-01	k: 418830	n:510000
KS ci ratio: 1.828874e-01	ci left: 8.176987e-04	ci right 9.841337e-04	k: 458	n:510000
PPIL6   510000 perm   185 sec   (2761 perm/sec)   p_kst 8.980392e-04   p_cons 8.212353e-01   p_joint 7.092157e-03

Joint ci ratio: 6.438136e-02	ci left: 6.850873e-03	ci right 7.308491e-03	k: 3680	n:520000
Cons ci ratio: 2.536007e-03	ci left: 8.202194e-01	ci right 8.223040e-01	k: 427057	n:520000
KS ci ratio: 1.813143e-01	ci left: 8.166570e-04	ci right 9.812933e-04	k: 466	n:520000
PPIL6   520000 perm   190 sec   (2734 perm/sec)   p_kst 8.961538e-04   p_cons 8.212635e-01   p_joint 7.076923e-03

Joint ci ratio: 6.371799e-02	ci left: 6.864569e-03	ci right 7.318203e-03	k: 3757	n:530000
Cons ci ratio: 2.513060e-03	ci left: 8.201014e-01	ci right 8.221668e-01	k: 435202	n:530000
KS ci ratio: 1.786553e-01	ci left: 8.264738e-04	ci right 9.903817e-04	k: 480	n:530000
PPIL6   530000 perm   196 sec   (2707 perm/sec)   p_kst 9.056604e-04   p_cons 8.211358e-01   p_joint 7.088679e-03

Joint ci ratio: 6.317434e-02	ci left: 6.855907e-03	ci right 7.304961e-03	k: 3822	n:540000
Cons ci ratio: 2.489154e-03	ci left: 8.201735e-01	ci right 8.222194e-01	k: 443447	n:540000
KS ci ratio: 1.768265e-01	ci left: 8.288635e-04	ci right 9.913827e-04	k: 490	n:540000
PPIL6   540000 perm   201 sec   (2680 perm/sec)   p_kst 9.074074e-04   p_cons 8.211981e-01   p_joint 7.077778e-03

Joint ci ratio: 6.259575e-02	ci left: 6.858315e-03	ci right 7.303264e-03	k: 3893	n:550000
Cons ci ratio: 2.466666e-03	ci left: 8.201537e-01	ci right 8.221811e-01	k: 451643	n:550000
KS ci ratio: 1.752279e-01	ci left: 8.294360e-04	ci right 9.904414e-04	k: 499	n:550000
PPIL6   550000 perm   207 sec   (2655 perm/sec)   p_kst 9.072727e-04   p_cons 8.211691e-01   p_joint 7.078182e-03

Joint ci ratio: 6.204853e-02	ci left: 6.857139e-03	ci right 7.297983e-03	k: 3962	n:560000
Cons ci ratio: 2.444582e-03	ci left: 8.201581e-01	ci right 8.221672e-01	k: 459852	n:560000
KS ci ratio: 1.736718e-01	ci left: 8.299943e-04	ci right 9.895274e-04	k: 508	n:560000
PPIL6   560000 perm   213 sec   (2623 perm/sec)   p_kst 9.071429e-04   p_cons 8.211643e-01   p_joint 7.075000e-03

Joint ci ratio: 6.151541e-02	ci left: 6.856021e-03	ci right 7.292871e-03	k: 4031	n:570000
Cons ci ratio: 2.423285e-03	ci left: 8.201377e-01	ci right 8.221292e-01	k: 468047	n:570000
KS ci ratio: 1.719904e-01	ci left: 8.322181e-04	ci right 9.904692e-04	k: 518	n:570000
PPIL6   570000 perm   219 sec   (2599 perm/sec)   p_kst 9.087719e-04   p_cons 8.211351e-01   p_joint 7.071930e-03

Joint ci ratio: 6.092105e-02	ci left: 6.871937e-03	ci right 7.305422e-03	k: 4110	n:580000
Cons ci ratio: 2.402351e-03	ci left: 8.201405e-01	ci right 8.221149e-01	k: 476255	n:580000
KS ci ratio: 1.701960e-01	ci left: 8.360230e-04	ci right 9.931689e-04	k: 529	n:580000
PPIL6   580000 perm   225 sec   (2573 perm/sec)   p_kst 9.120690e-04   p_cons 8.211293e-01   p_joint 7.086207e-03

Joint ci ratio: 6.040896e-02	ci left: 6.872308e-03	ci right 7.302045e-03	k: 4180	n:590000
Cons ci ratio: 2.381895e-03	ci left: 8.201502e-01	ci right 8.221077e-01	k: 484467	n:590000
KS ci ratio: 1.687691e-01	ci left: 8.364604e-04	ci right 9.922362e-04	k: 538	n:590000
PPIL6   590000 perm   232 sec   (2548 perm/sec)   p_kst 9.118644e-04   p_cons 8.211305e-01   p_joint 7.084746e-03

Joint ci ratio: 6.000204e-02	ci left: 6.851337e-03	ci right 7.276776e-03	k: 4237	n:600000
Cons ci ratio: 2.361189e-03	ci left: 8.202548e-01	ci right 8.221955e-01	k: 492736	n:600000
KS ci ratio: 1.666184e-01	ci left: 8.448738e-04	ci right 1.000010e-03	k: 552	n:600000
PPIL6   600000 perm   238 sec   (2524 perm/sec)   p_kst 9.200000e-04   p_cons 8.212267e-01   p_joint 7.061667e-03

Joint ci ratio: 5.939468e-02	ci left: 6.879517e-03	ci right 7.302234e-03	k: 4324	n:610000
Cons ci ratio: 2.342687e-03	ci left: 8.201457e-01	ci right 8.220709e-01	k: 500877	n:610000
KS ci ratio: 1.655740e-01	ci left: 8.420217e-04	ci right 9.955687e-04	k: 559	n:610000
PPIL6   610000 perm   244 sec   (2500 perm/sec)   p_kst 9.163934e-04   p_cons 8.211098e-01   p_joint 7.088525e-03

Joint ci ratio: 5.889959e-02	ci left: 6.884558e-03	ci right 7.303938e-03	k: 4397	n:620000
Cons ci ratio: 2.323463e-03	ci left: 8.201857e-01	ci right 8.220952e-01	k: 509108	n:620000
KS ci ratio: 1.641151e-01	ci left: 8.439044e-04	ci right 9.963049e-04	k: 569	n:620000
PPIL6   620000 perm   251 sec   (2475 perm/sec)   p_kst 9.177419e-04   p_cons 8.211419e-01   p_joint 7.091935e-03

Joint ci ratio: 5.839695e-02	ci left: 6.894146e-03	ci right 7.310405e-03	k: 4473	n:630000
Cons ci ratio: 2.305615e-03	ci left: 8.201084e-01	ci right 8.220030e-01	k: 517266	n:630000
KS ci ratio: 1.628346e-01	ci left: 8.442104e-04	ci right 9.953602e-04	k: 578	n:630000
PPIL6   630000 perm   257 sec   (2451 perm/sec)   p_kst 9.174603e-04   p_cons 8.210571e-01   p_joint 7.100000e-03

Joint ci ratio: 5.784936e-02	ci left: 6.917310e-03	ci right 7.330920e-03	k: 4558	n:640000
Cons ci ratio: 2.287587e-03	ci left: 8.201087e-01	ci right 8.219884e-01	k: 525472	n:640000
KS ci ratio: 1.621366e-01	ci left: 8.385142e-04	ci right 9.879379e-04	k: 583	n:640000
PPIL6   640000 perm   264 sec   (2428 perm/sec)   p_kst 9.109375e-04   p_cons 8.210500e-01   p_joint 7.121875e-03

Joint ci ratio: 5.743535e-02	ci left: 6.910964e-03	ci right 7.321139e-03	k: 4624	n:650000
Cons ci ratio: 2.269678e-03	ci left: 8.201476e-01	ci right 8.220127e-01	k: 533703	n:650000
KS ci ratio: 1.610375e-01	ci left: 8.374239e-04	ci right 9.855438e-04	k: 591	n:650000
PPIL6   650000 perm   270 sec   (2405 perm/sec)   p_kst 9.092308e-04   p_cons 8.210815e-01   p_joint 7.113846e-03

Joint ci ratio: 5.699340e-02	ci left: 6.913783e-03	ci right 7.320864e-03	k: 4696	n:660000
Cons ci ratio: 2.252753e-03	ci left: 8.201109e-01	ci right 8.219620e-01	k: 541885	n:660000
KS ci ratio: 1.599604e-01	ci left: 8.363700e-04	ci right 9.832191e-04	k: 599	n:660000
PPIL6   660000 perm   277 sec   (2383 perm/sec)   p_kst 9.075758e-04   p_cons 8.210379e-01   p_joint 7.115152e-03

Joint ci ratio: 5.652570e-02	ci left: 6.925359e-03	ci right 7.329666e-03	k: 4774	n:670000
Cons ci ratio: 2.235030e-03	ci left: 8.202295e-01	ci right 8.220662e-01	k: 550170	n:670000
KS ci ratio: 1.583841e-01	ci left: 8.410841e-04	ci right 9.871672e-04	k: 611	n:670000
PPIL6   670000 perm   284 sec   (2361 perm/sec)   p_kst 9.119403e-04   p_cons 8.211493e-01   p_joint 7.125373e-03

Joint ci ratio: 5.612176e-02	ci left: 6.923557e-03	ci right 7.324777e-03	k: 4843	n:680000
Cons ci ratio: 2.218719e-03	ci left: 8.202120e-01	ci right 8.220353e-01	k: 558365	n:680000
KS ci ratio: 1.569794e-01	ci left: 8.442535e-04	ci right 9.894642e-04	k: 622	n:680000
PPIL6   680000 perm   291 sec   (2335 perm/sec)   p_kst 9.147059e-04   p_cons 8.211250e-01   p_joint 7.122059e-03

Joint ci ratio: 5.573779e-02	ci left: 6.918959e-03	ci right 7.317080e-03	k: 4910	n:690000
Cons ci ratio: 2.202248e-03	ci left: 8.202633e-01	ci right 8.220731e-01	k: 566607	n:690000
KS ci ratio: 1.558577e-01	ci left: 8.445509e-04	ci right 9.886777e-04	k: 631	n:690000
PPIL6   690000 perm   298 sec   (2314 perm/sec)   p_kst 9.144928e-04   p_cons 8.211696e-01   p_joint 7.115942e-03

Joint ci ratio: 5.539523e-02	ci left: 6.906047e-03	ci right 7.300906e-03	k: 4971	n:700000
Cons ci ratio: 2.186543e-03	ci left: 8.202588e-01	ci right 8.220557e-01	k: 574811	n:700000
KS ci ratio: 1.553674e-01	ci left: 8.379774e-04	ci right 9.804906e-04	k: 635	n:700000
PPIL6   700000 perm   305 sec   (2294 perm/sec)   p_kst 9.071429e-04   p_cons 8.211586e-01   p_joint 7.101429e-03

Joint ci ratio: 5.497097e-02	ci left: 6.915734e-03	ci right 7.308022e-03	k: 5048	n:710000
Cons ci ratio: 2.171263e-03	ci left: 8.202418e-01	ci right 8.220260e-01	k: 583006	n:710000
KS ci ratio: 1.539217e-01	ci left: 8.424225e-04	ci right 9.842357e-04	k: 647	n:710000
PPIL6   710000 perm   312 sec   (2274 perm/sec)   p_kst 9.112676e-04   p_cons 8.211352e-01   p_joint 7.109859e-03

Joint ci ratio: 5.465304e-02	ci left: 6.900502e-03	ci right 7.289591e-03	k: 5107	n:720000
Cons ci ratio: 2.155717e-03	ci left: 8.203046e-01	ci right 8.220762e-01	k: 591258	n:720000
KS ci ratio: 1.528639e-01	ci left: 8.427424e-04	ci right 9.835451e-04	k: 656	n:720000
PPIL6   720000 perm   320 sec   (2253 perm/sec)   p_kst 9.111111e-04   p_cons 8.211917e-01   p_joint 7.093056e-03

Joint ci ratio: 5.428240e-02	ci left: 6.900559e-03	ci right 7.286930e-03	k: 5177	n:730000
Cons ci ratio: 2.141620e-03	ci left: 8.202120e-01	ci right 8.219718e-01	k: 599398	n:730000
KS ci ratio: 1.520562e-01	ci left: 8.404211e-04	ci right 9.800266e-04	k: 663	n:730000
PPIL6   730000 perm   327 sec   (2232 perm/sec)   p_kst 9.082192e-04   p_cons 8.210932e-01   p_joint 7.091781e-03

Joint ci ratio: 5.387785e-02	ci left: 6.911289e-03	ci right 7.295287e-03	k: 5255	n:740000
Cons ci ratio: 2.127197e-03	ci left: 8.202045e-01	ci right 8.219524e-01	k: 607599	n:740000
KS ci ratio: 1.508119e-01	ci left: 8.433658e-04	ci right 9.822106e-04	k: 674	n:740000
PPIL6   740000 perm   335 sec   (2212 perm/sec)   p_kst 9.108108e-04   p_cons 8.210797e-01   p_joint 7.101351e-03

Joint ci ratio: 5.352772e-02	ci left: 6.909903e-03	ci right 7.291252e-03	k: 5324	n:750000
Cons ci ratio: 2.112832e-03	ci left: 8.202294e-01	ci right 8.219655e-01	k: 615824	n:750000
KS ci ratio: 1.498165e-01	ci left: 8.436696e-04	ci right 9.815654e-04	k: 683	n:750000
PPIL6   750000 perm   342 sec   (2192 perm/sec)   p_kst 9.106667e-04   p_cons 8.210987e-01   p_joint 7.098667e-03

Joint ci ratio: 5.324899e-02	ci left: 6.891682e-03	ci right 7.269984e-03	k: 5380	n:760000
Cons ci ratio: 2.099450e-03	ci left: 8.201560e-01	ci right 8.218810e-01	k: 623975	n:760000
KS ci ratio: 1.491640e-01	ci left: 8.401680e-04	ci right 9.768401e-04	k: 689	n:760000
PPIL6   760000 perm   350 sec   (2174 perm/sec)   p_kst 9.065789e-04   p_cons 8.210197e-01   p_joint 7.078947e-03

Joint ci ratio: 5.286208e-02	ci left: 6.903417e-03	ci right 7.279526e-03	k: 5459	n:770000
Cons ci ratio: 2.086115e-03	ci left: 8.201133e-01	ci right 8.218272e-01	k: 632148	n:770000
KS ci ratio: 1.483068e-01	ci left: 8.392597e-04	ci right 9.749299e-04	k: 697	n:770000
PPIL6   770000 perm   357 sec   (2156 perm/sec)   p_kst 9.051948e-04   p_cons 8.209714e-01   p_joint 7.089610e-03

Joint ci ratio: 5.244534e-02	ci left: 6.924984e-03	ci right 7.299203e-03	k: 5546	n:780000
Cons ci ratio: 2.073212e-03	ci left: 8.200460e-01	ci right 8.217491e-01	k: 640301	n:780000
KS ci ratio: 1.474643e-01	ci left: 8.383768e-04	ci right 9.730665e-04	k: 705	n:780000
PPIL6   780000 perm   365 sec   (2138 perm/sec)   p_kst 9.038462e-04   p_cons 8.208987e-01   p_joint 7.110256e-03

Joint ci ratio: 5.211757e-02	ci left: 6.924775e-03	ci right 7.296574e-03	k: 5616	n:790000
Cons ci ratio: 2.060137e-03	ci left: 8.200387e-01	ci right 8.217311e-01	k: 648500	n:790000
KS ci ratio: 1.465332e-01	ci left: 8.387378e-04	ci right 9.725603e-04	k: 714	n:790000
PPIL6   790000 perm   373 sec   (2118 perm/sec)   p_kst 9.037975e-04   p_cons 8.208861e-01   p_joint 7.108861e-03

Joint ci ratio: 5.178669e-02	ci left: 6.927047e-03	ci right 7.296536e-03	k: 5688	n:800000
Cons ci ratio: 2.046967e-03	ci left: 8.200805e-01	ci right 8.217621e-01	k: 656738	n:800000
KS ci ratio: 1.459225e-01	ci left: 8.354791e-04	ci right 9.681776e-04	k: 720	n:800000
PPIL6   800000 perm   382 sec   (2097 perm/sec)   p_kst 9.000000e-04   p_cons 8.209225e-01   p_joint 7.110000e-03

Joint ci ratio: 5.149355e-02	ci left: 6.920738e-03	ci right 7.287739e-03	k: 5753	n:810000
Cons ci ratio: 2.034175e-03	ci left: 8.201028e-01	ci right 8.217739e-01	k: 664961	n:810000
KS ci ratio: 1.449209e-01	ci left: 8.370611e-04	ci right 9.690193e-04	k: 730	n:810000
PPIL6   810000 perm   391 sec   (2074 perm/sec)   p_kst 9.012346e-04   p_cons 8.209395e-01   p_joint 7.102469e-03

Joint ci ratio: 5.113458e-02	ci left: 6.933853e-03	ci right 7.298910e-03	k: 5834	n:820000
Cons ci ratio: 2.021854e-03	ci left: 8.200903e-01	ci right 8.217513e-01	k: 673156	n:820000
KS ci ratio: 1.440369e-01	ci left: 8.374319e-04	ci right 9.685741e-04	k: 739	n:820000
PPIL6   820000 perm   400 sec   (2050 perm/sec)   p_kst 9.012195e-04   p_cons 8.209220e-01   p_joint 7.114634e-03

Joint ci ratio: 5.084797e-02	ci left: 6.928816e-03	ci right 7.291504e-03	k: 5900	n:830000
Cons ci ratio: 2.009598e-03	ci left: 8.201011e-01	ci right 8.217520e-01	k: 681370	n:830000
KS ci ratio: 1.433607e-01	ci left: 8.354728e-04	ci right 9.656414e-04	k: 746	n:830000
PPIL6   830000 perm   408 sec   (2035 perm/sec)   p_kst 8.987952e-04   p_cons 8.209277e-01   p_joint 7.108434e-03

Joint ci ratio: 5.060886e-02	ci left: 6.912150e-03	ci right 7.272214e-03	k: 5956	n:840000
Cons ci ratio: 1.997740e-03	ci left: 8.200855e-01	ci right 8.217266e-01	k: 689562	n:840000
KS ci ratio: 1.423165e-01	ci left: 8.381540e-04	ci right 9.677085e-04	k: 757	n:840000
PPIL6   840000 perm   416 sec   (2018 perm/sec)   p_kst 9.011905e-04   p_cons 8.209071e-01   p_joint 7.090476e-03

Joint ci ratio: 5.037731e-02	ci left: 6.894718e-03	ci right 7.252183e-03	k: 6011	n:850000
Cons ci ratio: 1.986153e-03	ci left: 8.200608e-01	ci right 8.216923e-01	k: 697746	n:850000
KS ci ratio: 1.416640e-01	ci left: 8.362360e-04	ci right 9.648514e-04	k: 764	n:850000
PPIL6   850000 perm   424 sec   (2004 perm/sec)   p_kst 8.988235e-04   p_cons 8.208776e-01   p_joint 7.071765e-03

Joint ci ratio: 5.008659e-02	ci left: 6.894920e-03	ci right 7.250273e-03	k: 6081	n:860000
Cons ci ratio: 1.974421e-03	ci left: 8.200880e-01	ci right 8.217099e-01	k: 705974	n:860000
KS ci ratio: 1.409291e-01	ci left: 8.354858e-04	ci right 9.632632e-04	k: 772	n:860000
PPIL6   860000 perm   432 sec   (1989 perm/sec)   p_kst 8.976744e-04   p_cons 8.209000e-01   p_joint 7.070930e-03

Joint ci ratio: 4.974793e-02	ci left: 6.909881e-03	ci right 7.263528e-03	k: 6164	n:870000
Cons ci ratio: 1.962650e-03	ci left: 8.201514e-01	ci right 8.217637e-01	k: 714234	n:870000
KS ci ratio: 1.402056e-01	ci left: 8.347545e-04	ci right 9.617098e-04	k: 780	n:870000
PPIL6   870000 perm   441 sec   (1973 perm/sec)   p_kst 8.965517e-04   p_cons 8.209586e-01   p_joint 7.085057e-03

Joint ci ratio: 4.944795e-02	ci left: 6.915530e-03	ci right 7.267272e-03	k: 6239	n:880000
Cons ci ratio: 1.951358e-03	ci left: 8.201724e-01	ci right 8.217755e-01	k: 722458	n:880000
KS ci ratio: 1.392284e-01	ci left: 8.373318e-04	ci right 9.637179e-04	k: 791	n:880000
PPIL6   880000 perm   449 sec   (1959 perm/sec)   p_kst 8.988636e-04   p_cons 8.209750e-01   p_joint 7.089773e-03

Joint ci ratio: 4.917686e-02	ci left: 6.914400e-03	ci right 7.264101e-03	k: 6308	n:890000
Cons ci ratio: 1.940147e-03	ci left: 8.202098e-01	ci right 8.218038e-01	k: 730697	n:890000
KS ci ratio: 1.389659e-01	ci left: 8.311769e-04	ci right 9.563778e-04	k: 794	n:890000
PPIL6   890000 perm   457 sec   (1946 perm/sec)   p_kst 8.921348e-04   p_cons 8.210079e-01   p_joint 7.087640e-03

Joint ci ratio: 4.885235e-02	ci left: 6.929764e-03	ci right 7.277864e-03	k: 6392	n:900000
Cons ci ratio: 1.929383e-03	ci left: 8.202075e-01	ci right 8.217926e-01	k: 738901	n:900000
KS ci ratio: 1.379286e-01	ci left: 8.348132e-04	ci right 9.595461e-04	k: 806	n:900000
PPIL6   900000 perm   466 sec   (1932 perm/sec)   p_kst 8.955556e-04   p_cons 8.210011e-01   p_joint 7.102222e-03

Joint ci ratio: 4.857954e-02	ci left: 6.931770e-03	ci right 7.277972e-03	k: 6464	n:910000
Cons ci ratio: 1.918021e-03	ci left: 8.203242e-01	ci right 8.219002e-01	k: 747213	n:910000
KS ci ratio: 1.373344e-01	ci left: 8.330668e-04	ci right 9.569588e-04	k: 813	n:910000
PPIL6   910000 perm   474 sec   (1918 perm/sec)   p_kst 8.934066e-04   p_cons 8.211132e-01   p_joint 7.103297e-03

Joint ci ratio: 4.834477e-02	ci left: 6.924072e-03	ci right 7.268173e-03	k: 6527	n:920000
Cons ci ratio: 1.907591e-03	ci left: 8.203251e-01	ci right 8.218925e-01	k: 755421	n:920000
KS ci ratio: 1.364984e-01	ci left: 8.345090e-04	ci right 9.577986e-04	k: 823	n:920000
PPIL6   920000 perm   483 sec   (1905 perm/sec)   p_kst 8.945652e-04   p_cons 8.211098e-01   p_joint 7.094565e-03

Joint ci ratio: 4.806932e-02	ci left: 6.929293e-03	ci right 7.271637e-03	k: 6602	n:930000
Cons ci ratio: 1.896821e-03	ci left: 8.204046e-01	ci right 8.219633e-01	k: 763702	n:930000
KS ci ratio: 1.356775e-01	ci left: 8.359225e-04	ci right 9.586182e-04	k: 833	n:930000
PPIL6   930000 perm   492 sec   (1892 perm/sec)   p_kst 8.956989e-04   p_cons 8.211849e-01   p_joint 7.098925e-03

Joint ci ratio: 4.775892e-02	ci left: 6.945972e-03	ci right 7.286863e-03	k: 6688	n:940000
Cons ci ratio: 1.886540e-03	ci left: 8.204345e-01	ci right 8.219848e-01	k: 771938	n:940000
KS ci ratio: 1.350315e-01	ci left: 8.352521e-04	ci right 9.572189e-04	k: 841	n:940000
PPIL6   940000 perm   500 sec   (1879 perm/sec)   p_kst 8.946809e-04   p_cons 8.212106e-01   p_joint 7.114894e-03

Joint ci ratio: 4.752871e-02	ci left: 6.940462e-03	ci right 7.279396e-03	k: 6753	n:950000
Cons ci ratio: 1.876417e-03	ci left: 8.204649e-01	ci right 8.220069e-01	k: 780175	n:950000
KS ci ratio: 1.345532e-01	ci left: 8.325627e-04	ci right 9.536716e-04	k: 847	n:950000
PPIL6   950000 perm   509 sec   (1867 perm/sec)   p_kst 8.915789e-04   p_cons 8.212368e-01   p_joint 7.108421e-03

Joint ci ratio: 4.725296e-02	ci left: 6.949483e-03	ci right 7.286834e-03	k: 6832	n:960000
Cons ci ratio: 1.866429e-03	ci left: 8.204988e-01	ci right 8.220326e-01	k: 788416	n:960000
KS ci ratio: 1.337667e-01	ci left: 8.339573e-04	ci right 9.545036e-04	k: 857	n:960000
PPIL6   960000 perm   518 sec   (1854 perm/sec)   p_kst 8.927083e-04   p_cons 8.212667e-01   p_joint 7.116667e-03

Joint ci ratio: 4.703338e-02	ci left: 6.943040e-03	ci right 7.278470e-03	k: 6896	n:970000
Cons ci ratio: 1.856879e-03	ci left: 8.204876e-01	ci right 8.220136e-01	k: 796614	n:970000
KS ci ratio: 1.331475e-01	ci left: 8.333318e-04	ci right 9.531860e-04	k: 865	n:970000
PPIL6   970000 perm   527 sec   (1842 perm/sec)   p_kst 8.917526e-04   p_cons 8.212515e-01   p_joint 7.109278e-03

Joint ci ratio: 4.680668e-02	ci left: 6.939758e-03	ci right 7.273370e-03	k: 6963	n:980000
Cons ci ratio: 1.847050e-03	ci left: 8.205441e-01	ci right 8.220621e-01	k: 804878	n:980000
KS ci ratio: 1.326127e-01	ci left: 8.317338e-04	ci right 9.508398e-04	k: 872	n:980000
PPIL6   980000 perm   536 sec   (1830 perm/sec)   p_kst 8.897959e-04   p_cons 8.213041e-01   p_joint 7.105102e-03

Joint ci ratio: 4.657323e-02	ci left: 6.939541e-03	ci right 7.271434e-03	k: 7033	n:990000
Cons ci ratio: 1.837483e-03	ci left: 8.205824e-01	ci right 8.220925e-01	k: 813125	n:990000
KS ci ratio: 1.318596e-01	ci left: 8.330993e-04	ci right 9.516703e-04	k: 882	n:990000
PPIL6   990000 perm   545 sec   (1818 perm/sec)   p_kst 8.909091e-04   p_cons 8.213384e-01   p_joint 7.104040e-03

Joint ci ratio: 4.633666e-02	ci left: 6.941309e-03	ci right 7.271556e-03	k: 7105	n:1000000
Cons ci ratio: 1.828474e-03	ci left: 8.205537e-01	ci right 8.220564e-01	k: 821306	n:1000000
KS ci ratio: 1.312664e-01	ci left: 8.325050e-04	ci right 9.504168e-04	k: 890	n:1000000
PPIL6   1000000 perm   554 sec   (1806 perm/sec)   p_kst 8.900000e-04   p_cons 8.213060e-01   p_joint 7.105000e-03

Joint ci ratio: 4.609396e-02	ci left: 6.945983e-03	ci right 7.274675e-03	k: 7180	n:1010000
Cons ci ratio: 1.819615e-03	ci left: 8.205227e-01	ci right 8.220180e-01	k: 829484	n:1010000
KS ci ratio: 1.308268e-01	ci left: 8.300082e-04	ci right 9.471420e-04	k: 896	n:1010000
PPIL6   1010000 perm   563 sec   (1795 perm/sec)   p_kst 8.871287e-04   p_cons 8.212713e-01   p_joint 7.108911e-03

Joint ci ratio: 4.582959e-02	ci left: 6.958324e-03	ci right 7.285661e-03	k: 7263	n:1020000
Cons ci ratio: 1.810750e-03	ci left: 8.205139e-01	ci right 8.220019e-01	k: 837684	n:1020000
KS ci ratio: 1.298887e-01	ci left: 8.342004e-04	ci right 9.510167e-04	k: 909	n:1020000
PPIL6   1020000 perm   572 sec   (1783 perm/sec)   p_kst 8.911765e-04   p_cons 8.212588e-01   p_joint 7.120588e-03

Joint ci ratio: 4.556972e-02	ci left: 6.970430e-03	ci right 7.296429e-03	k: 7346	n:1030000
Cons ci ratio: 1.801889e-03	ci left: 8.205257e-01	ci right 8.220065e-01	k: 845905	n:1030000
KS ci ratio: 1.291106e-01	ci left: 8.364351e-04	ci right 9.528088e-04	k: 920	n:1030000
PPIL6   1030000 perm   581 sec   (1772 perm/sec)   p_kst 8.932039e-04   p_cons 8.212670e-01   p_joint 7.132039e-03

Joint ci ratio: 4.533881e-02	ci left: 6.974703e-03	ci right 7.299205e-03	k: 7421	n:1040000
Cons ci ratio: 1.793438e-03	ci left: 8.204911e-01	ci right 8.219648e-01	k: 854078	n:1040000
KS ci ratio: 1.279347e-01	ci left: 8.442133e-04	ci right 9.605184e-04	k: 937	n:1040000
PPIL6   1040000 perm   591 sec   (1761 perm/sec)   p_kst 9.009615e-04   p_cons 8.212288e-01   p_joint 7.135577e-03

Joint ci ratio: 4.511138e-02	ci left: 6.978898e-03	ci right 7.301925e-03	k: 7496	n:1050000
Cons ci ratio: 1.785162e-03	ci left: 8.204476e-01	ci right 8.219145e-01	k: 862241	n:1050000
KS ci ratio: 1.270571e-01	ci left: 8.481593e-04	ci right 9.641461e-04	k: 950	n:1050000
PPIL6   1050000 perm   600 sec   (1749 perm/sec)   p_kst 9.047619e-04   p_cons 8.211819e-01   p_joint 7.139048e-03

Joint ci ratio: 4.484858e-02	ci left: 6.995146e-03	ci right 7.316990e-03	k: 7584	n:1060000
Cons ci ratio: 1.776835e-03	ci left: 8.204323e-01	ci right 8.218923e-01	k: 870433	n:1060000
KS ci ratio: 1.261318e-01	ci left: 8.529473e-04	ci right 9.686758e-04	k: 964	n:1060000
PPIL6   1060000 perm   610 sec   (1738 perm/sec)   p_kst 9.094340e-04   p_cons 8.211632e-01   p_joint 7.154717e-03

Joint ci ratio: 4.459909e-02	ci left: 7.008323e-03	ci right 7.328933e-03	k: 7669	n:1070000
Cons ci ratio: 1.768454e-03	ci left: 8.204455e-01	ci right 8.218986e-01	k: 878655	n:1070000
KS ci ratio: 1.252264e-01	ci left: 8.576487e-04	ci right 9.731178e-04	k: 978	n:1070000
PPIL6   1070000 perm   619 sec   (1727 perm/sec)   p_kst 9.140187e-04   p_cons 8.211729e-01   p_joint 7.167290e-03

Joint ci ratio: 4.439988e-02	ci left: 7.006609e-03	ci right 7.325673e-03	k: 7738	n:1080000
Cons ci ratio: 1.760074e-03	ci left: 8.204779e-01	ci right 8.219241e-01	k: 886898	n:1080000
KS ci ratio: 1.244029e-01	ci left: 8.613688e-04	ci right 9.765200e-04	k: 991	n:1080000
PPIL6   1080000 perm   629 sec   (1717 perm/sec)   p_kst 9.175926e-04   p_cons 8.212019e-01   p_joint 7.164815e-03

Joint ci ratio: 4.418053e-02	ci left: 7.012188e-03	ci right 7.329889e-03	k: 7815	n:1090000
Cons ci ratio: 1.752053e-03	ci left: 8.204692e-01	ci right 8.219089e-01	k: 895097	n:1090000
KS ci ratio: 1.236571e-01	ci left: 8.641340e-04	ci right 9.789116e-04	k: 1003	n:1090000
PPIL6   1090000 perm   639 sec   (1705 perm/sec)   p_kst 9.201835e-04   p_cons 8.211899e-01   p_joint 7.169725e-03

Joint ci ratio: 4.398404e-02	ci left: 7.011376e-03	ci right 7.327591e-03	k: 7885	n:1100000
Cons ci ratio: 1.744006e-03	ci left: 8.204835e-01	ci right 8.219166e-01	k: 903321	n:1100000
KS ci ratio: 1.231065e-01	ci left: 8.642076e-04	ci right 9.784466e-04	k: 1012	n:1100000
PPIL6   1100000 perm   649 sec   (1695 perm/sec)   p_kst 9.200000e-04   p_cons 8.212009e-01   p_joint 7.168182e-03

Joint ci ratio: 4.377907e-02	ci left: 7.014146e-03	ci right 7.328975e-03	k: 7959	n:1110000
Cons ci ratio: 1.736015e-03	ci left: 8.205066e-01	ci right 8.219331e-01	k: 911555	n:1110000
KS ci ratio: 1.226835e-01	ci left: 8.625343e-04	ci right 9.761319e-04	k: 1019	n:1110000
PPIL6   1110000 perm   659 sec   (1685 perm/sec)   p_kst 9.180180e-04   p_cons 8.212207e-01   p_joint 7.170270e-03

Joint ci ratio: 4.067164e-02	ci left: 8.058558e-03	ci right 8.393993e-03	k: 9212	n:1120000
Cons ci ratio: 1.728275e-03	ci left: 8.205052e-01	ci right 8.219253e-01	k: 919762	n:1120000
KS ci ratio: 1.220272e-01	ci left: 8.643540e-04	ci right 9.775383e-04	k: 1030	n:1120000
PPIL6   1120000 perm   669 sec   (1675 perm/sec)   p_kst 9.196429e-04   p_cons 8.212161e-01   p_joint 8.225000e-03

Joint ci ratio: 4.048087e-02	ci left: 8.063454e-03	ci right 8.397481e-03	k: 9299	n:1130000
Cons ci ratio: 1.720529e-03	ci left: 8.205224e-01	ci right 8.219362e-01	k: 927990	n:1130000
KS ci ratio: 1.212648e-01	ci left: 8.678593e-04	ci right 9.807417e-04	k: 1043	n:1130000
PPIL6   1130000 perm   679 sec   (1665 perm/sec)   p_kst 9.230088e-04   p_cons 8.212301e-01   p_joint 8.229204e-03

Joint ci ratio: 4.029493e-02	ci left: 8.067399e-03	ci right 8.400019e-03	k: 9385	n:1140000
Cons ci ratio: 1.712967e-03	ci left: 8.205252e-01	ci right 8.219328e-01	k: 936202	n:1140000
KS ci ratio: 1.206882e-01	ci left: 8.687530e-04	ci right 9.811759e-04	k: 1053	n:1140000
PPIL6   1140000 perm   689 sec   (1655 perm/sec)   p_kst 9.236842e-04   p_cons 8.212298e-01   p_joint 8.232456e-03

Joint ci ratio: 4.010938e-02	ci left: 8.072140e-03	ci right 8.403388e-03	k: 9472	n:1150000
Cons ci ratio: 1.705293e-03	ci left: 8.205646e-01	ci right 8.219659e-01	k: 944456	n:1150000
KS ci ratio: 1.201762e-01	ci left: 8.687890e-04	ci right 9.807057e-04	k: 1062	n:1150000
PPIL6   1150000 perm   699 sec   (1645 perm/sec)   p_kst 9.234783e-04   p_cons 8.212661e-01   p_joint 8.236522e-03

Joint ci ratio: 3.994745e-02	ci left: 8.068267e-03	ci right 8.397989e-03	k: 9549	n:1160000
Cons ci ratio: 1.697795e-03	ci left: 8.205904e-01	ci right 8.219856e-01	k: 952695	n:1160000
KS ci ratio: 1.193923e-01	ci left: 8.730069e-04	ci right 9.846816e-04	k: 1076	n:1160000
PPIL6   1160000 perm   709 sec   (1636 perm/sec)   p_kst 9.275862e-04   p_cons 8.212888e-01   p_joint 8.231897e-03

Joint ci ratio: 4.260155e-02	ci left: 7.031528e-03	ci right 7.338440e-03	k: 8405	n:1170000
Cons ci ratio: 1.690464e-03	ci left: 8.206037e-01	ci right 8.219930e-01	k: 960920	n:1170000
KS ci ratio: 1.190613e-01	ci left: 8.705205e-04	ci right 9.815467e-04	k: 1082	n:1170000
PPIL6   1170000 perm   720 sec   (1624 perm/sec)   p_kst 9.247863e-04   p_cons 8.212991e-01   p_joint 7.183761e-03

Joint ci ratio: 3.960470e-02	ci left: 8.070796e-03	ci right 8.397727e-03	k: 9715	n:1180000
Cons ci ratio: 1.683335e-03	ci left: 8.205982e-01	ci right 8.219816e-01	k: 969123	n:1180000
KS ci ratio: 1.184611e-01	ci left: 8.721883e-04	ci right 9.828273e-04	k: 1093	n:1180000
PPIL6   1180000 perm   731 sec   (1613 perm/sec)   p_kst 9.262712e-04   p_cons 8.212907e-01   p_joint 8.233051e-03

Joint ci ratio: 3.943863e-02	ci left: 8.071201e-03	ci right 8.396746e-03	k: 9797	n:1190000
Cons ci ratio: 1.676045e-03	ci left: 8.206366e-01	ci right 8.220140e-01	k: 977378	n:1190000
KS ci ratio: 1.178166e-01	ci left: 8.746451e-04	ci right 9.849500e-04	k: 1105	n:1190000
PPIL6   1190000 perm   742 sec   (1603 perm/sec)   p_kst 9.285714e-04   p_cons 8.213261e-01   p_joint 8.232773e-03

Joint ci ratio: 3.929068e-02	ci left: 8.065000e-03	ci right 8.389047e-03	k: 9871	n:1200000
Cons ci ratio: 1.668906e-03	ci left: 8.206643e-01	ci right 8.220358e-01	k: 985621	n:1200000
KS ci ratio: 1.174985e-01	ci left: 8.722092e-04	ci right 9.818893e-04	k: 1111	n:1200000
PPIL6   1200000 perm   753 sec   (1594 perm/sec)   p_kst 9.258333e-04   p_cons 8.213508e-01   p_joint 8.225833e-03

Joint ci ratio: 3.911069e-02	ci left: 8.072817e-03	ci right 8.395659e-03	k: 9962	n:1210000
Cons ci ratio: 1.661684e-03	ci left: 8.207222e-01	ci right 8.220879e-01	k: 993901	n:1210000
KS ci ratio: 1.168694e-01	ci left: 8.746276e-04	ci right 9.839823e-04	k: 1123	n:1210000
PPIL6   1210000 perm   763 sec   (1585 perm/sec)   p_kst 9.280992e-04   p_cons 8.214058e-01   p_joint 8.233058e-03

Joint ci ratio: 3.895464e-02	ci left: 8.071580e-03	ci right 8.393056e-03	k: 10042	n:1220000
Cons ci ratio: 1.654948e-03	ci left: 8.207093e-01	ci right 8.220695e-01	k: 1002096	n:1220000
KS ci ratio: 1.164558e-01	ci left: 8.738245e-04	ci right 9.826656e-04	k: 1131	n:1220000
PPIL6   1220000 perm   774 sec   (1576 perm/sec)   p_kst 9.270492e-04   p_cons 8.213902e-01   p_joint 8.231148e-03

Joint ci ratio: 3.879465e-02	ci left: 8.072781e-03	ci right 8.392955e-03	k: 10125	n:1230000
Cons ci ratio: 1.648120e-03	ci left: 8.207277e-01	ci right 8.220822e-01	k: 1010329	n:1230000
KS ci ratio: 1.154901e-01	ci left: 8.817195e-04	ci right 9.905712e-04	k: 1150	n:1230000
PPIL6   1230000 perm   785 sec   (1567 perm/sec)   p_kst 9.349593e-04   p_cons 8.214057e-01   p_joint 8.231707e-03

Joint ci ratio: 3.862899e-02	ci left: 8.077161e-03	ci right 8.396110e-03	k: 10212	n:1240000
Cons ci ratio: 1.641271e-03	ci left: 8.207643e-01	ci right 8.221133e-01	k: 1018585	n:1240000
KS ci ratio: 1.149917e-01	ci left: 8.824409e-04	ci right 9.908796e-04	k: 1160	n:1240000
PPIL6   1240000 perm   796 sec   (1558 perm/sec)   p_kst 9.354839e-04   p_cons 8.214395e-01   p_joint 8.235484e-03

Joint ci ratio: 3.848804e-02	ci left: 8.071965e-03	ci right 8.389520e-03	k: 10287	n:1250000
Cons ci ratio: 1.634641e-03	ci left: 8.207763e-01	ci right 8.221198e-01	k: 1026811	n:1250000
KS ci ratio: 1.145486e-01	ci left: 8.823747e-04	ci right 9.903592e-04	k: 1169	n:1250000
PPIL6   1250000 perm   807 sec   (1550 perm/sec)   p_kst 9.352000e-04   p_cons 8.214488e-01   p_joint 8.229600e-03

Joint ci ratio: 3.834863e-02	ci left: 8.066853e-03	ci right 8.383033e-03	k: 10362	n:1260000
Cons ci ratio: 1.628020e-03	ci left: 8.208008e-01	ci right 8.221390e-01	k: 1035053	n:1260000
KS ci ratio: 1.141105e-01	ci left: 8.823103e-04	ci right 9.898462e-04	k: 1178	n:1260000
PPIL6   1260000 perm   818 sec   (1541 perm/sec)   p_kst 9.349206e-04   p_cons 8.214706e-01   p_joint 8.223810e-03

Joint ci ratio: 3.821625e-02	ci left: 8.059484e-03	ci right 8.374261e-03	k: 10434	n:1270000
Cons ci ratio: 1.621553e-03	ci left: 8.208116e-01	ci right 8.221444e-01	k: 1043278	n:1270000
KS ci ratio: 1.137734e-01	ci left: 8.807177e-04	ci right 9.877210e-04	k: 1185	n:1270000
PPIL6   1270000 perm   829 sec   (1532 perm/sec)   p_kst 9.330709e-04   p_cons 8.214787e-01   p_joint 8.215748e-03

Joint ci ratio: 3.809438e-02	ci left: 8.048363e-03	ci right 8.361681e-03	k: 10501	n:1280000
Cons ci ratio: 1.615292e-03	ci left: 8.207987e-01	ci right 8.221264e-01	k: 1051473	n:1280000
KS ci ratio: 1.132020e-01	ci left: 8.829460e-04	ci right 9.896454e-04	k: 1197	n:1280000
PPIL6   1280000 perm   840 sec   (1524 perm/sec)   p_kst 9.351563e-04   p_cons 8.214633e-01   p_joint 8.203906e-03

Joint ci ratio: 3.793207e-02	ci left: 8.055078e-03	ci right 8.367292e-03	k: 10591	n:1290000
Cons ci ratio: 1.609000e-03	ci left: 8.208047e-01	ci right 8.221272e-01	k: 1059692	n:1290000
KS ci ratio: 1.129667e-01	ci left: 8.798678e-04	ci right 9.859594e-04	k: 1202	n:1290000
PPIL6   1290000 perm   851 sec   (1515 perm/sec)   p_kst 9.317829e-04   p_cons 8.214667e-01   p_joint 8.210078e-03

Joint ci ratio: 3.887108e-02	ci left: 7.611397e-03	ci right 7.913879e-03	k: 10090	n:1300000
Cons ci ratio: 1.602706e-03	ci left: 8.208245e-01	ci right 8.221418e-01	k: 1067929	n:1300000
KS ci ratio: 1.124537e-01	ci left: 8.813226e-04	ci right 9.870750e-04	k: 1213	n:1300000
PPIL6   1300000 perm   863 sec   (1507 perm/sec)   p_kst 9.330769e-04   p_cons 8.214838e-01   p_joint 7.761538e-03

Joint ci ratio: 3.871596e-02	ci left: 7.614527e-03	ci right 7.915900e-03	k: 10171	n:1310000
Cons ci ratio: 1.596863e-03	ci left: 8.207744e-01	ci right 8.220868e-01	k: 1076075	n:1310000
KS ci ratio: 1.119019e-01	ci left: 8.834983e-04	ci right 9.889573e-04	k: 1225	n:1310000
PPIL6   1310000 perm   874 sec   (1499 perm/sec)   p_kst 9.351145e-04   p_cons 8.214313e-01   p_joint 7.764122e-03

Joint ci ratio: 3.856836e-02	ci left: 7.615361e-03	ci right 7.915592e-03	k: 10249	n:1320000
Cons ci ratio: 1.591030e-03	ci left: 8.207349e-01	ci right 8.220425e-01	k: 1084234	n:1320000
KS ci ratio: 1.116746e-01	ci left: 8.804870e-04	ci right 9.853590e-04	k: 1230	n:1320000
PPIL6   1320000 perm   886 sec   (1491 perm/sec)   p_kst 9.318182e-04   p_cons 8.213894e-01   p_joint 7.764394e-03

Joint ci ratio: 3.843370e-02	ci left: 7.611717e-03	ci right 7.910733e-03	k: 10321	n:1330000
Cons ci ratio: 1.584724e-03	ci left: 8.207954e-01	ci right 8.220979e-01	k: 1092525	n:1330000
KS ci ratio: 1.110447e-01	ci left: 8.841000e-04	ci right 9.887696e-04	k: 1244	n:1330000
PPIL6   1330000 perm   897 sec   (1483 perm/sec)   p_kst 9.353383e-04   p_cons 8.214474e-01   p_joint 7.760150e-03

Joint ci ratio: 3.825964e-02	ci left: 7.624391e-03	ci right 7.922519e-03	k: 10415	n:1340000
Cons ci ratio: 1.578657e-03	ci left: 8.208244e-01	ci right 8.221220e-01	k: 1100775	n:1340000
KS ci ratio: 1.104693e-01	ci left: 8.869350e-04	ci right 9.913607e-04	k: 1257	n:1340000
PPIL6   1340000 perm   909 sec   (1475 perm/sec)   p_kst 9.380597e-04   p_cons 8.214739e-01   p_joint 7.772388e-03

Joint ci ratio: 3.811170e-02	ci left: 7.627341e-03	ci right 7.924406e-03	k: 10496	n:1350000
Cons ci ratio: 1.572691e-03	ci left: 8.208470e-01	ci right 8.221397e-01	k: 1109017	n:1350000
KS ci ratio: 1.100328e-01	ci left: 8.875683e-04	ci right 9.916289e-04	k: 1267	n:1350000
PPIL6   1350000 perm   920 sec   (1467 perm/sec)   p_kst 9.385185e-04   p_cons 8.214941e-01   p_joint 7.774815e-03

Joint ci ratio: 3.796726e-02	ci left: 7.629522e-03	ci right 7.925521e-03	k: 10576	n:1360000
Cons ci ratio: 1.566859e-03	ci left: 8.208568e-01	ci right 8.221447e-01	k: 1117242	n:1360000
KS ci ratio: 1.098599e-01	ci left: 8.839023e-04	ci right 9.873597e-04	k: 1271	n:1360000
PPIL6   1360000 perm   932 sec   (1459 perm/sec)   p_kst 9.345588e-04   p_cons 8.215015e-01   p_joint 7.776471e-03

Joint ci ratio: 3.780658e-02	ci left: 7.638904e-03	ci right 7.933986e-03	k: 10666	n:1370000
Cons ci ratio: 1.560936e-03	ci left: 8.208957e-01	ci right 8.221788e-01	k: 1125507	n:1370000
KS ci ratio: 1.094306e-01	ci left: 8.845495e-04	ci right 9.876520e-04	k: 1281	n:1370000
PPIL6   1370000 perm   944 sec   (1451 perm/sec)   p_kst 9.350365e-04   p_cons 8.215380e-01   p_joint 7.785401e-03

Joint ci ratio: 3.764616e-02	ci left: 7.648870e-03	ci right 7.943056e-03	k: 10757	n:1380000
Cons ci ratio: 1.555272e-03	ci left: 8.208978e-01	ci right 8.221762e-01	k: 1133722	n:1380000
KS ci ratio: 1.089640e-01	ci left: 8.858931e-04	ci right 9.886837e-04	k: 1292	n:1380000
PPIL6   1380000 perm   956 sec   (1444 perm/sec)   p_kst 9.362319e-04   p_cons 8.215377e-01   p_joint 7.794928e-03

Joint ci ratio: 3.753837e-02	ci left: 7.638027e-03	ci right 7.930936e-03	k: 10819	n:1390000
Cons ci ratio: 1.549604e-03	ci left: 8.209121e-01	ci right 8.221859e-01	k: 1141954	n:1390000
KS ci ratio: 1.086703e-01	ci left: 8.844187e-04	ci right 9.867439e-04	k: 1299	n:1390000
PPIL6   1390000 perm   968 sec   (1436 perm/sec)   p_kst 9.345324e-04   p_cons 8.215496e-01   p_joint 7.783453e-03

Joint ci ratio: 3.742109e-02	ci left: 7.631585e-03	ci right 7.923314e-03	k: 10887	n:1400000
Cons ci ratio: 1.544137e-03	ci left: 8.208997e-01	ci right 8.221690e-01	k: 1150149	n:1400000
KS ci ratio: 1.085038e-01	ci left: 8.808808e-04	ci right 9.826305e-04	k: 1303	n:1400000
PPIL6   1400000 perm   980 sec   (1429 perm/sec)   p_kst 9.307143e-04   p_cons 8.215350e-01   p_joint 7.776429e-03

Joint ci ratio: 3.728263e-02	ci left: 7.634371e-03	ci right 7.925103e-03	k: 10968	n:1410000
Cons ci ratio: 1.538816e-03	ci left: 8.208705e-01	ci right 8.221353e-01	k: 1158320	n:1410000
KS ci ratio: 1.082138e-01	ci left: 8.794634e-04	ci right 9.807606e-04	k: 1310	n:1410000
PPIL6   1410000 perm   992 sec   (1422 perm/sec)   p_kst 9.290780e-04   p_cons 8.215035e-01   p_joint 7.778723e-03

Joint ci ratio: 3.714569e-02	ci left: 7.637119e-03	ci right 7.926865e-03	k: 11049	n:1420000
Cons ci ratio: 1.533477e-03	ci left: 8.208558e-01	ci right 8.221162e-01	k: 1166511	n:1420000
KS ci ratio: 1.075998e-01	ci left: 8.835484e-04	ci right 9.847021e-04	k: 1325	n:1420000
PPIL6   1420000 perm   1004 sec   (1415 perm/sec)   p_kst 9.330986e-04   p_cons 8.214866e-01   p_joint 7.780986e-03

Joint ci ratio: 3.854590e-02	ci left: 7.041991e-03	ci right 7.319451e-03	k: 10267	n:1430000
Cons ci ratio: 1.527930e-03	ci left: 8.208917e-01	ci right 8.221476e-01	k: 1174774	n:1430000
KS ci ratio: 1.069562e-01	ci left: 8.882585e-04	ci right 9.893048e-04	k: 1341	n:1430000
PPIL6   1430000 perm   1016 sec   (1407 perm/sec)   p_kst 9.377622e-04   p_cons 8.215203e-01   p_joint 7.179720e-03

Joint ci ratio: 3.686468e-02	ci left: 7.647324e-03	ci right 7.935216e-03	k: 11218	n:1440000
Cons ci ratio: 1.522689e-03	ci left: 8.208798e-01	ci right 8.221314e-01	k: 1182969	n:1440000
KS ci ratio: 1.066784e-01	ci left: 8.868212e-04	ci right 9.874256e-04	k: 1348	n:1440000
PPIL6   1440000 perm   1028 sec   (1400 perm/sec)   p_kst 9.361111e-04   p_cons 8.215062e-01   p_joint 7.790278e-03

Joint ci ratio: 3.824698e-02	ci left: 7.054829e-03	ci right 7.330593e-03	k: 10428	n:1450000
Cons ci ratio: 1.517215e-03	ci left: 8.209234e-01	ci right 8.221705e-01	k: 1191244	n:1450000
KS ci ratio: 1.062851e-01	ci left: 8.874181e-04	ci right 9.876959e-04	k: 1358	n:1450000
PPIL6   1450000 perm   1041 sec   (1393 perm/sec)   p_kst 9.365517e-04   p_cons 8.215476e-01   p_joint 7.191724e-03

Joint ci ratio: 3.658671e-02	ci left: 7.658615e-03	ci right 7.944713e-03	k: 11389	n:1460000
Cons ci ratio: 1.512054e-03	ci left: 8.209170e-01	ci right 8.221598e-01	k: 1199447	n:1460000
KS ci ratio: 1.057032e-01	ci left: 8.913416e-04	ci right 9.914770e-04	k: 1373	n:1460000
PPIL6   1460000 perm   1053 sec   (1387 perm/sec)   p_kst 9.404110e-04   p_cons 8.215390e-01   p_joint 7.800685e-03

Joint ci ratio: 3.647650e-02	ci left: 7.653025e-03	ci right 7.938035e-03	k: 11458	n:1470000
Cons ci ratio: 1.506820e-03	ci left: 8.209352e-01	ci right 8.221738e-01	k: 1207686	n:1470000
KS ci ratio: 1.054350e-01	ci left: 8.899142e-04	ci right 9.896199e-04	k: 1380	n:1470000
PPIL6   1470000 perm   1066 sec   (1380 perm/sec)   p_kst 9.387755e-04   p_cons 8.215551e-01   p_joint 7.794558e-03

Joint ci ratio: 3.787128e-02	ci left: 7.051029e-03	ci right 7.323878e-03	k: 10636	n:1480000
Cons ci ratio: 1.501833e-03	ci left: 8.209153e-01	ci right 8.221497e-01	k: 1215869	n:1480000
KS ci ratio: 1.052829e-01	ci left: 8.865326e-04	ci right 9.857073e-04	k: 1384	n:1480000
PPIL6   1480000 perm   1078 sec   (1373 perm/sec)   p_kst 9.351351e-04   p_cons 8.215331e-01   p_joint 7.186486e-03

Joint ci ratio: 3.623858e-02	ci left: 7.650721e-03	ci right 7.933748e-03	k: 11609	n:1490000
Cons ci ratio: 1.496810e-03	ci left: 8.209124e-01	ci right 8.221427e-01	k: 1224077	n:1490000
KS ci ratio: 1.050557e-01	ci left: 8.845036e-04	ci right 9.832246e-04	k: 1390	n:1490000
PPIL6   1490000 perm   1091 sec   (1366 perm/sec)   p_kst 9.328859e-04   p_cons 8.215282e-01   p_joint 7.791275e-03

Joint ci ratio: 3.612836e-02	ci left: 7.646621e-03	ci right 7.928618e-03	k: 11680	n:1500000
Cons ci ratio: 1.491932e-03	ci left: 8.208909e-01	ci right 8.221172e-01	k: 1232257	n:1500000
KS ci ratio: 1.047175e-01	ci left: 8.844495e-04	ci right 9.828271e-04	k: 1399	n:1500000
PPIL6   1500000 perm   1103 sec   (1360 perm/sec)   p_kst 9.326667e-04   p_cons 8.215047e-01   p_joint 7.786667e-03

Joint ci ratio: 3.600217e-02	ci left: 7.649796e-03	ci right 7.930904e-03	k: 11762	n:1510000
Cons ci ratio: 1.486860e-03	ci left: 8.209175e-01	ci right 8.221396e-01	k: 1240509	n:1510000
KS ci ratio: 1.043825e-01	ci left: 8.843967e-04	ci right 9.824344e-04	k: 1408	n:1510000
PPIL6   1510000 perm   1116 sec   (1353 perm/sec)   p_kst 9.324503e-04   p_cons 8.215291e-01   p_joint 7.789404e-03

Joint ci ratio: 3.739119e-02	ci left: 7.044694e-03	ci right 7.313768e-03	k: 10911	n:1520000
Cons ci ratio: 1.481759e-03	ci left: 8.209595e-01	ci right 8.221775e-01	k: 1248785	n:1520000
KS ci ratio: 1.040875e-01	ci left: 8.837042e-04	ci right 9.813713e-04	k: 1416	n:1520000
PPIL6   1520000 perm   1129 sec   (1346 perm/sec)   p_kst 9.315789e-04   p_cons 8.215691e-01   p_joint 7.178289e-03

Joint ci ratio: 3.576276e-02	ci left: 7.652141e-03	ci right 7.931427e-03	k: 11920	n:1530000
Cons ci ratio: 1.477273e-03	ci left: 8.208890e-01	ci right 8.221032e-01	k: 1256890	n:1530000
KS ci ratio: 1.036857e-01	ci left: 8.849311e-04	ci right 9.823334e-04	k: 1427	n:1530000
PPIL6   1530000 perm   1143 sec   (1339 perm/sec)   p_kst 9.326797e-04   p_cons 8.214967e-01   p_joint 7.790850e-03

Joint ci ratio: 3.564334e-02	ci left: 7.653936e-03	ci right 7.932336e-03	k: 12000	n:1540000
Cons ci ratio: 1.472537e-03	ci left: 8.208774e-01	ci right 8.220877e-01	k: 1265084	n:1540000
KS ci ratio: 1.035410e-01	ci left: 8.817148e-04	ci right 9.786194e-04	k: 1431	n:1540000
PPIL6   1540000 perm   1157 sec   (1331 perm/sec)   p_kst 9.292208e-04   p_cons 8.214831e-01   p_joint 7.792208e-03

Joint ci ratio: 3.552807e-02	ci left: 7.654430e-03	ci right 7.931930e-03	k: 12078	n:1550000
Cons ci ratio: 1.467688e-03	ci left: 8.208975e-01	ci right 8.221039e-01	k: 1273327	n:1550000
KS ci ratio: 1.033609e-01	ci left: 8.791687e-04	ci right 9.756150e-04	k: 1436	n:1550000
PPIL6   1550000 perm   1170 sec   (1324 perm/sec)   p_kst 9.264516e-04   p_cons 8.215013e-01   p_joint 7.792258e-03

Joint ci ratio: 3.692557e-02	ci left: 7.039975e-03	ci right 7.305449e-03	k: 11188	n:1560000
Cons ci ratio: 1.463002e-03	ci left: 8.208943e-01	ci right 8.220968e-01	k: 1281534	n:1560000
KS ci ratio: 1.031817e-01	ci left: 8.766552e-04	ci right 9.726490e-04	k: 1441	n:1560000
PPIL6   1560000 perm   1183 sec   (1318 perm/sec)   p_kst 9.237179e-04   p_cons 8.214962e-01   p_joint 7.171795e-03

Joint ci ratio: 3.679088e-02	ci left: 7.046883e-03	ci right 7.311628e-03	k: 11270	n:1570000
Cons ci ratio: 1.458367e-03	ci left: 8.208899e-01	ci right 8.220885e-01	k: 1289739	n:1570000
KS ci ratio: 1.026137e-01	ci left: 8.810004e-04	ci right 9.769069e-04	k: 1457	n:1570000
PPIL6   1570000 perm   1197 sec   (1312 perm/sec)   p_kst 9.280255e-04   p_cons 8.214898e-01   p_joint 7.178344e-03

Joint ci ratio: 3.665928e-02	ci left: 7.053078e-03	ci right 7.317088e-03	k: 11351	n:1580000
Cons ci ratio: 1.453512e-03	ci left: 8.209388e-01	ci right 8.221335e-01	k: 1298028	n:1580000
KS ci ratio: 1.021939e-01	ci left: 8.828249e-04	ci right 9.785133e-04	k: 1469	n:1580000
PPIL6   1580000 perm   1211 sec   (1305 perm/sec)   p_kst 9.297468e-04   p_cons 8.215367e-01   p_joint 7.184177e-03

Joint ci ratio: 3.654357e-02	ci left: 7.053587e-03	ci right 7.316766e-03	k: 11423	n:1590000
Cons ci ratio: 1.449013e-03	ci left: 8.209247e-01	ci right 8.221157e-01	k: 1306218	n:1590000
KS ci ratio: 1.018481e-01	ci left: 8.834014e-04	ci right 9.788089e-04	k: 1479	n:1590000
PPIL6   1590000 perm   1224 sec   (1299 perm/sec)   p_kst 9.301887e-04   p_cons 8.215208e-01   p_joint 7.184277e-03

Joint ci ratio: 3.495391e-02	ci left: 7.663027e-03	ci right 7.936259e-03	k: 12478	n:1600000
Cons ci ratio: 1.444130e-03	ci left: 8.209971e-01	ci right 8.221842e-01	k: 1314546	n:1600000
KS ci ratio: 1.015740e-01	ci left: 8.827529e-04	ci right 9.778185e-04	k: 1487	n:1600000
PPIL6   1600000 perm   1237 sec   (1293 perm/sec)   p_kst 9.293750e-04   p_cons 8.215912e-01   p_joint 7.798750e-03

Joint ci ratio: 3.484938e-02	ci left: 7.661608e-03	ci right 7.933956e-03	k: 12553	n:1610000
Cons ci ratio: 1.439559e-03	ci left: 8.210152e-01	ci right 8.221986e-01	k: 1322788	n:1610000
KS ci ratio: 1.012005e-01	ci left: 8.839290e-04	ci right 9.787505e-04	k: 1498	n:1610000
PPIL6   1610000 perm   1251 sec   (1287 perm/sec)   p_kst 9.304348e-04   p_cons 8.216075e-01   p_joint 7.796894e-03

Joint ci ratio: 3.474162e-02	ci left: 7.662044e-03	ci right 7.933547e-03	k: 12631	n:1620000
Cons ci ratio: 1.435034e-03	ci left: 8.210324e-01	ci right 8.222121e-01	k: 1331029	n:1620000
KS ci ratio: 1.008981e-01	ci left: 8.838878e-04	ci right 9.784048e-04	k: 1507	n:1620000
PPIL6   1620000 perm   1265 sec   (1280 perm/sec)   p_kst 9.302469e-04   p_cons 8.216228e-01   p_joint 7.796914e-03

Joint ci ratio: 3.463485e-02	ci left: 7.662475e-03	ci right 7.933143e-03	k: 12709	n:1630000
Cons ci ratio: 1.430677e-03	ci left: 8.210237e-01	ci right 8.221997e-01	k: 1339228	n:1630000
KS ci ratio: 1.003998e-01	ci left: 8.874361e-04	ci right 9.818362e-04	k: 1522	n:1630000
PPIL6   1630000 perm   1279 sec   (1275 perm/sec)   p_kst 9.337423e-04   p_cons 8.216123e-01   p_joint 7.796933e-03

Joint ci ratio: 3.356250e-02	ci left: 8.110917e-03	ci right 8.388385e-03	k: 13528	n:1640000
Cons ci ratio: 1.426347e-03	ci left: 8.210175e-01	ci right 8.221899e-01	k: 1347431	n:1640000
KS ci ratio: 1.001700e-01	ci left: 8.861861e-04	ci right 9.802247e-04	k: 1529	n:1640000
PPIL6   1640000 perm   1293 sec   (1269 perm/sec)   p_kst 9.323171e-04   p_cons 8.216043e-01   p_joint 8.248780e-03

Joint ci ratio: 3.588381e-02	ci left: 7.051736e-03	ci right 7.309998e-03	k: 11847	n:1650000
Cons ci ratio: 1.422074e-03	ci left: 8.210077e-01	ci right 8.221766e-01	k: 1355628	n:1650000
KS ci ratio: 9.994168e-02	ci left: 8.849515e-04	ci right 9.786326e-04	k: 1536	n:1650000
PPIL6   1650000 perm   1307 sec   (1263 perm/sec)   p_kst 9.309091e-04   p_cons 8.215927e-01   p_joint 7.180000e-03

Outputting figure to mutsig2_images.part000000000135/PPIL6.2_1050_1650000_0.00093091_0.82159_0.00718.png
                gene_name: PPIL6
               theta_stop: 0.100 
                    nperm: 1650000 
                     p_ks: 0.00093 
        ci_ks_bounds_left: 0.00088 
       ci_ks_bounds_right: 0.00098 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.82 
                  p_joint: 0.0072 
     ci_joint_bounds_left: 0.0071 
    ci_joint_bounds_right: 0.0073 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000135
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 135 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1709>
Subject: Job 8704311: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1709>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000136> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 19:38:27 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000136.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000136.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 136  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000136.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    172.95 sec.
    Max Memory :      5659 MB
    Max Swap   :      8373 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
136
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 136
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 136: processing genes 12214 - 12303
Calculating significance of each gene.
Using projection method.
12214	PPM1A	1
12215	PPM1B	1
In gene PPM1D the following bins exceed PROBCAP:
    THCA-ET-A3BW-TP	categ 6	N = 1573    n = 1	mu =   6.84e-08
12216	PPM1D	2.835137e-06
12217	PPM1E	1
12218	PPM1F	1
12219	PPM1G	1
12220	PPM1H	1
12221	PPM1J	2.781256e-03
12222	PPM1K	1
12223	PPM1L	1
12224	PPM1M	1
12225	PPM1N	1
12226	PPME1	1
12227	PPOX	1.308642e-01
12228	PPP1CA	1
12229	PPP1CB	1
12230	PPP1CC	1
12231	PPP1R10	1
12232	PPP1R11	1
12233	PPP1R12A	1
12234	PPP1R12B	1
12235	PPP1R12C	1
12236	PPP1R13B	1.885434e-01
12237	PPP1R13L	5.239485e-02
12238	PPP1R14A	1
12239	PPP1R14B	1
12240	PPP1R14C	1
12241	PPP1R14D	1
12242	PPP1R15A	1.632394e-01
12243	PPP1R15B	1
12244	PPP1R16A	1
12245	PPP1R16B	1
12246	PPP1R1A	1
12247	PPP1R1B	1
12248	PPP1R1C	1
12249	PPP1R2	1
12250	PPP1R3A	1
12251	PPP1R3B	5.853115e-02
12252	PPP1R3C	1
12253	PPP1R3D	1
12254	PPP1R3F	1
12255	PPP1R7	1
12256	PPP1R8	1
12257	PPP1R9A	1
12258	PPP1R9B	1
12259	PPP2CA	1
12260	PPP2CB	1
12261	PPP2R1A	3.704114e-02
12262	PPP2R1B	1
12263	PPP2R2A	1
12264	PPP2R2B	1
12265	PPP2R2C	1
12266	PPP2R2D	1
12267	PPP2R3A	1
12268	PPP2R3B	1
12269	PPP2R3C	1
12270	PPP2R4	1
12271	PPP2R5A	1
12272	PPP2R5B	1
12273	PPP2R5C	4.680586e-02
12274	PPP2R5D	2.470859e-01
12275	PPP2R5E	1
12276	PPP3CA	1
12277	PPP3CB	1
12278	PPP3CC	1
12279	PPP3R1	1
In gene PPP3R2 the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 526     n = 1	mu =   2.35e-07
12280	PPP3R2	6.809919e-02
12281	PPP4C	2.176479e-02
12282	PPP4R1	1
12283	PPP4R2	1
12284	PPP4R4	1
12285	PPP5C	1
12286	PPP6C	1.306740e-01
12287	PPPDE1	1
12288	PPPDE2	1
12289	PPRC1	5.967602e-02
12290	PPT1	1
12291	PPT2	1
12292	PPTC7	1
12293	PPWD1	1.770266e-01
12294	PPY	1
12295	PPYR1	1
12296	PQBP1	1
12297	PQLC1	1
12298	PQLC2	1
12299	PQLC3	1
12300	PRAC	1
12301	PRAF2	1
12302	PRAM1	1
12303	PRAME	1
Done

Running MutSig 2:
Scatter job 136: processing genes 12214 - 12303
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PPM1D
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.557126e-02	ci left: 1.370752e-01	ci right 1.509329e-01	k: 1439	n:10000
Cons ci ratio: 2.150889e-02	ci left: 7.602067e-01	ci right 7.768366e-01	k: 7686	n:10000
KS ci ratio: 2.418322e-01	ci left: 2.249916e-02	ci right 2.878131e-02	k: 255	n:10000
PPM1D   10000 perm   2 sec   (5626 perm/sec)   p_kst 2.550000e-02   p_cons 7.686000e-01   p_joint 1.439000e-01

Joint ci ratio: 1.220452e-01	ci left: 4.604902e-02	ci right 5.208294e-02	k: 980	n:20000
Cons ci ratio: 1.433868e-02	ci left: 7.831775e-01	ci right 7.945384e-01	k: 15778	n:20000
KS ci ratio: 1.693159e-01	ci left: 2.388659e-02	ci right 2.835263e-02	k: 521	n:20000
PPM1D   20000 perm   6 sec   (3307 perm/sec)   p_kst 2.605000e-02   p_cons 7.889000e-01   p_joint 4.900000e-02

Joint ci ratio: 8.838394e-02	ci left: 5.880731e-02	ci right 6.427798e-02	k: 1845	n:30000
Cons ci ratio: 1.184673e-02	ci left: 7.802399e-01	ci right 7.895716e-01	k: 23548	n:30000
KS ci ratio: 1.383377e-01	ci left: 2.426080e-02	ci right 2.789843e-02	k: 781	n:30000
PPM1D   30000 perm   8 sec   (3642 perm/sec)   p_kst 2.603333e-02   p_cons 7.849333e-01   p_joint 6.150000e-02

Joint ci ratio: 7.780260e-02	ci left: 5.734857e-02	ci right 6.201561e-02	k: 2386	n:40000
Cons ci ratio: 1.051311e-02	ci left: 7.724605e-01	ci right 7.806493e-01	k: 31063	n:40000
KS ci ratio: 1.220256e-01	ci left: 2.361333e-02	ci right 2.670613e-02	k: 1005	n:40000
PPM1D   40000 perm   11 sec   (3684 perm/sec)   p_kst 2.512500e-02   p_cons 7.765750e-01   p_joint 5.965000e-02

Joint ci ratio: 6.581953e-02	ci left: 6.405561e-02	ci right 6.843491e-02	k: 3311	n:50000
Cons ci ratio: 9.416620e-03	ci left: 7.724001e-01	ci right 7.797278e-01	k: 38804	n:50000
KS ci ratio: 1.069182e-01	ci left: 2.477854e-02	ci right 2.759684e-02	k: 1308	n:50000
PPM1D   50000 perm   13 sec   (3740 perm/sec)   p_kst 2.616000e-02   p_cons 7.760800e-01   p_joint 6.622000e-02

Joint ci ratio: 6.105628e-02	ci left: 6.231725e-02	ci right 6.625836e-02	k: 3856	n:60000
Cons ci ratio: 8.606378e-03	ci left: 7.723073e-01	ci right 7.789994e-01	k: 46540	n:60000
KS ci ratio: 9.705833e-02	ci left: 2.518061e-02	ci right 2.776547e-02	k: 1587	n:60000
PPM1D   60000 perm   16 sec   (3738 perm/sec)   p_kst 2.645000e-02   p_cons 7.756667e-01   p_joint 6.426667e-02

Outputting figure to mutsig2_images.part000000000136/PPM1D.5_1842_60000_0.02645_0.77567_0.064267.png
                gene_name: PPM1D
               theta_stop: 0.097 
                    nperm: 60000 
                     p_ks: 0.026 
        ci_ks_bounds_left: 0.025 
       ci_ks_bounds_right: 0.028 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.78 
                  p_joint: 0.064 
     ci_joint_bounds_left: 0.062 
    ci_joint_bounds_right: 0.066 

Current progress: 20 percent done.
PPM1J
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.577910e-02	ci left: 8.536564e-01	ci right 8.673329e-01	k: 8606	n:10000
KS ci ratio: 4.240530e-02	ci left: 4.508931e-01	ci right 4.705298e-01	k: 4607	n:10000
PPM1J   10000 perm   2 sec   (6368 perm/sec)   p_kst 4.607000e-01   p_cons 8.606000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000136/PPM1J.2_1558_10000_0.4607_0.8606_1.png
                gene_name: PPM1J
               theta_stop: 0.042 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.85 
     ci_cons_bounds_right: 0.87 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 40 percent done.
PPP1R13L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.783921e-02	ci left: 6.553502e-01	ci right 6.739538e-01	k: 6647	n:10000
KS ci ratio: 1.205944e-02	ci left: 9.079222e-01	ci right 9.190356e-01	k: 9136	n:10000
PPP1R13L   10000 perm   2 sec   (5739 perm/sec)   p_kst 9.136000e-01   p_cons 6.647000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000136/PPP1R13L.2_2535_10000_0.9136_0.6647_1.png
                gene_name: PPP1R13L
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.66 
     ci_cons_bounds_right: 0.67 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 60 percent done.
PPP2R1A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.069622e-01	ci left: 1.120319e-01	ci right 1.247914e-01	k: 1183	n:10000
Cons ci ratio: 8.729533e-02	ci left: 1.604251e-01	ci right 1.751689e-01	k: 1677	n:10000
KS ci ratio: 1.541967e-01	ci left: 5.600212e-02	ci right 6.545578e-02	k: 606	n:10000
PPP2R1A   10000 perm   2 sec   (6314 perm/sec)   p_kst 6.060000e-02   p_cons 1.677000e-01   p_joint 1.183000e-01

Joint ci ratio: 6.736176e-02	ci left: 1.399006e-01	ci right 1.497029e-01	k: 2895	n:20000
Cons ci ratio: 6.124621e-02	ci left: 1.647680e-01	ci right 1.752282e-01	k: 3399	n:20000
KS ci ratio: 1.095653e-01	ci left: 5.684523e-02	ci right 6.348336e-02	k: 1202	n:20000
PPP2R1A   20000 perm   4 sec   (5604 perm/sec)   p_kst 6.010000e-02   p_cons 1.699500e-01   p_joint 1.447500e-01

Joint ci ratio: 5.555544e-02	ci left: 1.383648e-01	ci right 1.463046e-01	k: 4269	n:30000
Cons ci ratio: 5.050953e-02	ci left: 1.629602e-01	ci right 1.714377e-01	k: 5015	n:30000
KS ci ratio: 9.046474e-02	ci left: 5.622935e-02	ci right 6.158981e-02	k: 1766	n:30000
PPP2R1A   30000 perm   6 sec   (5329 perm/sec)   p_kst 5.886667e-02   p_cons 1.671667e-01   p_joint 1.423000e-01

Outputting figure to mutsig2_images.part000000000136/PPP2R1A.2_1830_30000_0.058867_0.16717_0.1423.png
                gene_name: PPP2R1A
               theta_stop: 0.090 
                    nperm: 30000 
                     p_ks: 0.059 
        ci_ks_bounds_left: 0.056 
       ci_ks_bounds_right: 0.062 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.14 
     ci_joint_bounds_left: 0.14 
    ci_joint_bounds_right: 0.15 

Current progress: 80 percent done.
PPRC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.719645e-02	ci left: 2.452932e-01	ci right 2.624504e-01	k: 2538	n:10000
Cons ci ratio: 5.932719e-02	ci left: 2.947944e-01	ci right 3.129200e-01	k: 3038	n:10000
KS ci ratio: 9.423735e-02	ci left: 1.405053e-01	ci right 1.545008e-01	k: 1474	n:10000
PPRC1   10000 perm   2 sec   (5160 perm/sec)   p_kst 1.474000e-01   p_cons 3.038000e-01   p_joint 2.538000e-01

Outputting figure to mutsig2_images.part000000000136/PPRC1.2_5051_10000_0.1474_0.3038_0.2538.png
                gene_name: PPRC1
               theta_stop: 0.094 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.30 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.31 
                  p_joint: 0.25 
     ci_joint_bounds_left: 0.25 
    ci_joint_bounds_right: 0.26 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000136
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 136 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1644>
Subject: Job 8704312: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1644>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000137> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 22:44:26 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000137.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000137.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 137  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000137.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  11483.03 sec.
    Max Memory :      6085 MB
    Max Swap   :      8584 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
137
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 137
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 137: processing genes 12304 - 12394
Calculating significance of each gene.
Using projection method.
12304	PRAMEF1	1
12305	PRAMEF10	1
12306	PRAMEF11	1
12307	PRAMEF12	1
12308	PRAMEF14	1
12309	PRAMEF17	1
12310	PRAMEF18	1
12311	PRAMEF19	1
12312	PRAMEF2	1
12313	PRAMEF4	1
12314	PRAP1	1
12315	PRB1	1
12316	PRB2	1
12317	PRB3	1
12318	PRB4	1
12319	PRC1	2.663635e-01
12320	PRCC	1
12321	PRCD	1
12322	PRCP	1
12323	PRDM1	2.480039e-01
12324	PRDM10	1
12325	PRDM11	1
12326	PRDM12	1
12327	PRDM13	1
12328	PRDM14	1
12329	PRDM15	2.864580e-01
12330	PRDM16	2.987389e-01
12331	PRDM2	1
12332	PRDM4	4.464973e-02
12333	PRDM5	1
12334	PRDM7	1
12335	PRDM8	1.968514e-02
In gene PRDM9 the following bins exceed PROBCAP:
    THCA-EM-A3O9-TP	categ 6	N = 2725    n = 1	mu =   2.02e-07
12336	PRDM9	2.610221e-01
12337	PRDX1	1
12338	PRDX2	1
12339	PRDX3	1
12340	PRDX4	1
12341	PRDX5	1
12342	PRDX6	1
12343	PREB	1
12344	PRELID1	1
12345	PRELID2	1
12346	PRELP	1
12347	PREP	1
12348	PREPL	1
12349	PREX1	1
12350	PREX2	1
12351	PRF1	1
12352	PRG2	1
12353	PRG3	1
12354	PRG4	3.296617e-03
12355	PRH1	1
12356	PRH2	1
12357	PRHOXNB	1
12358	PRIC285	4.435540e-01
12359	PRICKLE1	8.208366e-02
12360	PRICKLE2	1
12361	PRICKLE3	1
12362	PRICKLE4	1.446979e-01
12363	PRIM1	1
12364	PRIM2	1
12365	PRIMA1	1
12366	PRKAA1	1
12367	PRKAA2	1
12368	PRKAB1	1
12369	PRKAB2	1
12370	PRKACA	1
12371	PRKACB	1
12372	PRKACG	1
12373	PRKAG1	1
12374	PRKAG2	1
12375	PRKAG3	1
12376	PRKAR1A	1
12377	PRKAR1B	1
12378	PRKAR2A	8.848290e-02
12379	PRKAR2B	1
12380	PRKCA	1
12381	PRKCB	2.708207e-01
12382	PRKCD	1
12383	PRKCDBP	1
12384	PRKCE	1
12385	PRKCG	1
12386	PRKCH	1
12387	PRKCI	1
12388	PRKCQ	1
12389	PRKCSH	7.617827e-02
12390	PRKCZ	1
12391	PRKD1	8.827747e-03
12392	PRKD2	1
12393	PRKD3	1.836408e-01
In gene PRKDC the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 6	N = 9028    n = 1	mu =   6.83e-08
12394	PRKDC	6.589884e-02
Done

Running MutSig 2:
Scatter job 137: processing genes 12304 - 12394
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PRG4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.863014e-01	ci left: 1.576399e-02	ci right 2.112177e-02	k: 183	n:10000
Cons ci ratio: 4.319059e-03	ci left: 9.857766e-01	ci right 9.901322e-01	k: 9881	n:10000
KS ci ratio: 1.959510e+00	ci left: 6.187149e-05	ci right 8.764745e-04	k: 3	n:10000
PRG4   10000 perm   2 sec   (4515 perm/sec)   p_kst 3.000000e-04   p_cons 9.881000e-01   p_joint 1.830000e-02

Joint ci ratio: 2.830257e-01	ci left: 8.155818e-03	ci right 1.088963e-02	k: 189	n:20000
Cons ci ratio: 3.124502e-03	ci left: 9.858623e-01	ci right 9.889936e-01	k: 19750	n:20000
KS ci ratio: 1.481324e+00	ci left: 1.101024e-04	ci right 6.528585e-04	k: 6	n:20000
PRG4   20000 perm   8 sec   (2589 perm/sec)   p_kst 3.000000e-04   p_cons 9.875000e-01   p_joint 9.450000e-03

Joint ci ratio: 2.663777e-01	ci left: 6.212330e-03	ci right 8.151619e-03	k: 214	n:30000
Cons ci ratio: 2.518456e-03	ci left: 9.864927e-01	ci right 9.890115e-01	k: 29634	n:30000
KS ci ratio: 1.385721e+00	ci left: 9.381708e-05	ci right 4.806964e-04	k: 7	n:30000
PRG4   30000 perm   11 sec   (2854 perm/sec)   p_kst 2.333333e-04   p_cons 9.878000e-01   p_joint 7.133333e-03

Joint ci ratio: 2.629550e-01	ci left: 4.798815e-03	ci right 6.274366e-03	k: 220	n:40000
Cons ci ratio: 2.218393e-03	ci left: 9.862323e-01	ci right 9.884462e-01	k: 39495	n:40000
KS ci ratio: 1.306503e+00	ci left: 8.634963e-05	ci right 3.940415e-04	k: 8	n:40000
PRG4   40000 perm   13 sec   (3011 perm/sec)   p_kst 2.000000e-04   p_cons 9.873750e-01   p_joint 5.500000e-03

Joint ci ratio: 2.823551e-01	ci left: 3.298269e-03	ci right 4.400568e-03	k: 191	n:50000
Cons ci ratio: 1.997676e-03	ci left: 9.861759e-01	ci right 9.881669e-01	k: 49360	n:50000
KS ci ratio: 1.181783e+00	ci left: 9.591181e-05	ci right 3.677763e-04	k: 10	n:50000
PRG4   50000 perm   16 sec   (3100 perm/sec)   p_kst 2.000000e-04   p_cons 9.872000e-01   p_joint 3.820000e-03

Joint ci ratio: 3.114450e-01	ci left: 2.223788e-03	ci right 3.058813e-03	k: 157	n:60000
Cons ci ratio: 1.820992e-03	ci left: 9.863027e-01	ci right 9.881163e-01	k: 59234	n:60000
KS ci ratio: 1.087086e+00	ci left: 1.033471e-04	ci right 3.493337e-04	k: 12	n:60000
PRG4   60000 perm   19 sec   (3145 perm/sec)   p_kst 2.000000e-04   p_cons 9.872333e-01   p_joint 2.616667e-03

Joint ci ratio: 2.942704e-01	ci left: 2.156911e-03	ci right 2.913838e-03	k: 176	n:70000
Cons ci ratio: 1.679389e-03	ci left: 9.864723e-01	ci right 9.881441e-01	k: 69113	n:70000
KS ci ratio: 1.087104e+00	ci left: 8.858268e-05	ci right 2.994320e-04	k: 12	n:70000
PRG4   70000 perm   22 sec   (3166 perm/sec)   p_kst 1.714286e-04   p_cons 9.873286e-01   p_joint 2.514286e-03

Joint ci ratio: 3.057848e-01	ci left: 1.736964e-03	ci right 2.375012e-03	k: 163	n:80000
Cons ci ratio: 1.571827e-03	ci left: 9.865128e-01	ci right 9.880766e-01	k: 78985	n:80000
KS ci ratio: 1.012038e+00	ci left: 9.567733e-05	ci right 2.936028e-04	k: 14	n:80000
PRG4   80000 perm   25 sec   (3172 perm/sec)   p_kst 1.750000e-04   p_cons 9.873125e-01   p_joint 2.037500e-03

Joint ci ratio: 3.517819e-01	ci left: 1.135958e-03	ci right 1.630412e-03	k: 123	n:90000
Cons ci ratio: 1.479967e-03	ci left: 9.865927e-01	ci right 9.880646e-01	k: 88861	n:90000
KS ci ratio: 9.799074e-01	ci left: 9.328497e-05	ci right 2.748764e-04	k: 15	n:90000
PRG4   90000 perm   28 sec   (3168 perm/sec)   p_kst 1.666667e-04   p_cons 9.873444e-01   p_joint 1.366667e-03

Joint ci ratio: 2.879360e-01	ci left: 1.583927e-03	ci right 2.125621e-03	k: 184	n:100000
Cons ci ratio: 1.471709e-03	ci left: 9.853654e-01	ci right 9.868262e-01	k: 98611	n:100000
KS ci ratio: 9.506541e-01	ci left: 9.145650e-05	ci right 2.598170e-04	k: 16	n:100000
PRG4   100000 perm   32 sec   (3157 perm/sec)   p_kst 1.600000e-04   p_cons 9.861100e-01   p_joint 1.840000e-03

Joint ci ratio: 2.944068e-01	ci left: 1.372494e-03	ci right 1.854395e-03	k: 176	n:110000
Cons ci ratio: 1.392481e-03	ci left: 9.856142e-01	ci right 9.869964e-01	k: 108495	n:110000
KS ci ratio: 9.238731e-01	ci left: 9.003092e-05	ci right 2.474308e-04	k: 17	n:110000
PRG4   110000 perm   35 sec   (3140 perm/sec)   p_kst 1.545455e-04   p_cons 9.863182e-01   p_joint 1.600000e-03

Joint ci ratio: 2.969577e-01	ci left: 1.234960e-03	ci right 1.673035e-03	k: 173	n:120000
Cons ci ratio: 1.338987e-03	ci left: 9.855239e-01	ci right 9.868525e-01	k: 118344	n:120000
KS ci ratio: 8.992347e-01	ci left: 8.890185e-05	ci right 2.370543e-04	k: 18	n:120000
PRG4   120000 perm   38 sec   (3121 perm/sec)   p_kst 1.500000e-04   p_cons 9.862000e-01   p_joint 1.441667e-03

Joint ci ratio: 2.944435e-01	ci left: 1.161322e-03	ci right 1.569135e-03	k: 176	n:130000
Cons ci ratio: 1.292953e-03	ci left: 9.854094e-01	ci right 9.866918e-01	k: 128188	n:130000
KS ci ratio: 8.764678e-01	ci left: 8.799638e-05	ci right 2.282280e-04	k: 19	n:130000
PRG4   130000 perm   42 sec   (3100 perm/sec)   p_kst 1.461538e-04   p_cons 9.860615e-01   p_joint 1.353846e-03

Joint ci ratio: 3.004666e-01	ci left: 1.032090e-03	ci right 1.403351e-03	k: 169	n:140000
Cons ci ratio: 1.251908e-03	ci left: 9.852978e-01	ci right 9.865391e-01	k: 138030	n:140000
KS ci ratio: 8.356782e-01	ci left: 9.285469e-05	ci right 2.292818e-04	k: 21	n:140000
PRG4   140000 perm   46 sec   (3065 perm/sec)   p_kst 1.500000e-04   p_cons 9.859286e-01   p_joint 1.207143e-03

Joint ci ratio: 2.895970e-01	ci left: 1.043540e-03	ci right 1.402853e-03	k: 182	n:150000
Cons ci ratio: 1.158551e-03	ci left: 9.864889e-01	ci right 9.876389e-01	k: 148061	n:150000
KS ci ratio: 8.001000e-01	ci left: 9.720258e-05	ci right 2.300665e-04	k: 23	n:150000
PRG4   150000 perm   49 sec   (3039 perm/sec)   p_kst 1.533333e-04   p_cons 9.870733e-01   p_joint 1.213333e-03

Joint ci ratio: 2.805450e-01	ci left: 1.047958e-03	ci right 1.395522e-03	k: 194	n:160000
Cons ci ratio: 1.175379e-03	ci left: 9.852338e-01	ci right 9.863985e-01	k: 157732	n:160000
KS ci ratio: 7.839363e-01	ci left: 9.611012e-05	ci right 2.231799e-04	k: 24	n:160000
PRG4   160000 perm   53 sec   (3014 perm/sec)   p_kst 1.500000e-04   p_cons 9.858250e-01   p_joint 1.212500e-03

Joint ci ratio: 2.777179e-01	ci left: 1.008193e-03	ci right 1.338609e-03	k: 198	n:170000
Cons ci ratio: 1.137930e-03	ci left: 9.853102e-01	ci right 9.864378e-01	k: 167600	n:170000
KS ci ratio: 7.687142e-01	ci left: 9.517091e-05	ci right 2.170802e-04	k: 25	n:170000
PRG4   170000 perm   57 sec   (2988 perm/sec)   p_kst 1.470588e-04   p_cons 9.858824e-01   p_joint 1.164706e-03

Joint ci ratio: 2.849875e-01	ci left: 9.005381e-04	ci right 1.204789e-03	k: 188	n:180000
Cons ci ratio: 1.110662e-03	ci left: 9.852031e-01	ci right 9.863034e-01	k: 177437	n:180000
KS ci ratio: 7.278651e-01	ci left: 1.033679e-04	ci right 2.248133e-04	k: 28	n:180000
PRG4   180000 perm   61 sec   (2962 perm/sec)   p_kst 1.555556e-04   p_cons 9.857611e-01   p_joint 1.044444e-03

Joint ci ratio: 2.928557e-01	ci left: 8.043168e-04	ci right 1.084954e-03	k: 178	n:190000
Cons ci ratio: 1.077703e-03	ci left: 9.853061e-01	ci right 9.863737e-01	k: 187311	n:190000
KS ci ratio: 7.278683e-01	ci left: 9.792741e-05	ci right 2.129814e-04	k: 28	n:190000
PRG4   190000 perm   65 sec   (2935 perm/sec)   p_kst 1.473684e-04   p_cons 9.858474e-01   p_joint 9.368421e-04

Joint ci ratio: 3.385221e-01	ci left: 5.568193e-04	ci right 7.880517e-04	k: 133	n:200000
Cons ci ratio: 1.049742e-03	ci left: 9.853380e-01	ci right 9.863778e-01	k: 197173	n:200000
KS ci ratio: 7.156353e-01	ci left: 9.711086e-05	ci right 2.082376e-04	k: 29	n:200000
PRG4   200000 perm   69 sec   (2909 perm/sec)   p_kst 1.450000e-04   p_cons 9.858650e-01   p_joint 6.650000e-04

Joint ci ratio: 2.770532e-01	ci left: 8.205754e-04	ci right 1.088746e-03	k: 199	n:210000
Cons ci ratio: 9.408264e-04	ci left: 9.875785e-01	ci right 9.885127e-01	k: 207491	n:210000
KS ci ratio: 7.039991e-01	ci left: 9.638712e-05	ci right 2.039312e-04	k: 30	n:210000
PRG4   210000 perm   73 sec   (2883 perm/sec)   p_kst 1.428571e-04   p_cons 9.880524e-01   p_joint 9.476190e-04

Joint ci ratio: 2.736565e-01	ci left: 8.044338e-04	ci right 1.063551e-03	k: 204	n:220000
Cons ci ratio: 9.217532e-04	ci left: 9.875224e-01	ci right 9.884374e-01	k: 217357	n:220000
KS ci ratio: 7.040016e-01	ci left: 9.200580e-05	ci right 1.946619e-04	k: 30	n:220000
PRG4   220000 perm   77 sec   (2858 perm/sec)   p_kst 1.363636e-04   p_cons 9.879864e-01   p_joint 9.272727e-04

Joint ci ratio: 2.710283e-01	ci left: 7.856612e-04	ci right 1.035888e-03	k: 208	n:230000
Cons ci ratio: 9.016279e-04	ci left: 9.875289e-01	ci right 9.884239e-01	k: 227236	n:230000
KS ci ratio: 6.823340e-01	ci left: 9.516700e-05	ci right 1.964050e-04	k: 32	n:230000
PRG4   230000 perm   81 sec   (2830 perm/sec)   p_kst 1.391304e-04   p_cons 9.879826e-01   p_joint 9.043478e-04

Joint ci ratio: 2.750131e-01	ci left: 7.296335e-04	ci right 9.660230e-04	k: 202	n:240000
Cons ci ratio: 8.795092e-04	ci left: 9.876242e-01	ci right 9.884973e-01	k: 237136	n:240000
KS ci ratio: 6.722254e-01	ci left: 9.465050e-05	ci right 1.930958e-04	k: 33	n:240000
PRG4   240000 perm   86 sec   (2802 perm/sec)   p_kst 1.375000e-04   p_cons 9.880667e-01   p_joint 8.416667e-04

Joint ci ratio: 2.684790e-01	ci left: 7.377237e-04	ci right 9.700999e-04	k: 212	n:250000
Cons ci ratio: 8.612466e-04	ci left: 9.876469e-01	ci right 9.885017e-01	k: 247020	n:250000
KS ci ratio: 6.197556e-01	ci left: 1.109335e-04	ci right 2.132510e-04	k: 39	n:250000
PRG4   250000 perm   90 sec   (2774 perm/sec)   p_kst 1.560000e-04   p_cons 9.880800e-01   p_joint 8.480000e-04

Joint ci ratio: 1.746147e-01	ci left: 1.765685e-03	ci right 2.107109e-03	k: 502	n:260000
Cons ci ratio: 9.222866e-04	ci left: 9.853535e-01	ci right 9.862664e-01	k: 256312	n:260000
KS ci ratio: 6.121517e-01	ci left: 1.099122e-04	ci right 2.094890e-04	k: 40	n:260000
PRG4   260000 perm   95 sec   (2748 perm/sec)   p_kst 1.538462e-04   p_cons 9.858154e-01   p_joint 1.930769e-03

Joint ci ratio: 1.746210e-01	ci left: 1.700284e-03	ci right 2.029075e-03	k: 502	n:270000
Cons ci ratio: 9.048206e-04	ci left: 9.853692e-01	ci right 9.862648e-01	k: 266172	n:270000
KS ci ratio: 5.977457e-01	ci left: 1.121130e-04	ci right 2.102602e-04	k: 42	n:270000
PRG4   270000 perm   99 sec   (2721 perm/sec)   p_kst 1.555556e-04   p_cons 9.858222e-01   p_joint 1.859259e-03

Joint ci ratio: 1.769322e-01	ci left: 1.595166e-03	ci right 1.908149e-03	k: 489	n:280000
Cons ci ratio: 8.886509e-04	ci left: 9.853730e-01	ci right 9.862526e-01	k: 276029	n:280000
KS ci ratio: 5.977474e-01	ci left: 1.081089e-04	ci right 2.027511e-04	k: 42	n:280000
PRG4   280000 perm   104 sec   (2695 perm/sec)   p_kst 1.500000e-04   p_cons 9.858179e-01   p_joint 1.746429e-03

Joint ci ratio: 1.765770e-01	ci left: 1.546748e-03	ci right 1.849556e-03	k: 491	n:290000
Cons ci ratio: 8.727799e-04	ci left: 9.853943e-01	ci right 9.862580e-01	k: 285891	n:290000
KS ci ratio: 5.909164e-01	ci left: 1.073100e-04	ci right 1.997215e-04	k: 43	n:290000
PRG4   290000 perm   109 sec   (2671 perm/sec)   p_kst 1.482759e-04   p_cons 9.858310e-01   p_joint 1.693103e-03

Joint ci ratio: 1.729239e-01	ci left: 1.562129e-03	ci right 1.860962e-03	k: 512	n:300000
Cons ci ratio: 8.581388e-04	ci left: 9.854007e-01	ci right 9.862499e-01	k: 295749	n:300000
KS ci ratio: 5.843143e-01	ci left: 1.065702e-04	ci right 1.968882e-04	k: 44	n:300000
PRG4   300000 perm   113 sec   (2645 perm/sec)   p_kst 1.466667e-04   p_cons 9.858300e-01   p_joint 1.706667e-03

Joint ci ratio: 1.704505e-01	ci left: 1.558046e-03	ci right 1.851395e-03	k: 527	n:310000
Cons ci ratio: 8.451845e-04	ci left: 9.853741e-01	ci right 9.862104e-01	k: 305597	n:310000
KS ci ratio: 5.843157e-01	ci left: 1.031324e-04	ci right 1.905371e-04	k: 44	n:310000
PRG4   310000 perm   118 sec   (2619 perm/sec)   p_kst 1.419355e-04   p_cons 9.857968e-01   p_joint 1.700000e-03

Joint ci ratio: 1.690182e-01	ci left: 1.536286e-03	ci right 1.822860e-03	k: 536	n:320000
Cons ci ratio: 8.314966e-04	ci left: 9.853936e-01	ci right 9.862163e-01	k: 315459	n:320000
KS ci ratio: 5.843171e-01	ci left: 9.990943e-05	ci right 1.845830e-04	k: 44	n:320000
PRG4   320000 perm   123 sec   (2595 perm/sec)   p_kst 1.375000e-04   p_cons 9.858094e-01   p_joint 1.675000e-03

Joint ci ratio: 1.683955e-01	ci left: 1.501339e-03	ci right 1.780257e-03	k: 540	n:330000
Cons ci ratio: 8.190729e-04	ci left: 9.853905e-01	ci right 9.862009e-01	k: 325314	n:330000
KS ci ratio: 5.657613e-01	ci left: 1.046498e-04	ci right 1.893896e-04	k: 47	n:330000
PRG4   330000 perm   128 sec   (2570 perm/sec)   p_kst 1.424242e-04   p_cons 9.858000e-01   p_joint 1.636364e-03

Joint ci ratio: 1.743079e-01	ci left: 1.355830e-03	ci right 1.617491e-03	k: 504	n:340000
Cons ci ratio: 8.077826e-04	ci left: 9.853669e-01	ci right 9.861660e-01	k: 335162	n:340000
KS ci ratio: 5.599588e-01	ci left: 1.040942e-04	ci right 1.871752e-04	k: 48	n:340000
PRG4   340000 perm   134 sec   (2544 perm/sec)   p_kst 1.411765e-04   p_cons 9.857706e-01   p_joint 1.482353e-03

Joint ci ratio: 1.744847e-01	ci left: 1.314357e-03	ci right 1.568298e-03	k: 503	n:350000
Cons ci ratio: 7.965384e-04	ci left: 9.853591e-01	ci right 9.861471e-01	k: 345015	n:350000
KS ci ratio: 5.543313e-01	ci left: 1.035745e-04	ci right 1.850833e-04	k: 49	n:350000
PRG4   350000 perm   139 sec   (2519 perm/sec)   p_kst 1.400000e-04   p_cons 9.857571e-01   p_joint 1.437143e-03

Joint ci ratio: 1.814727e-01	ci left: 1.176984e-03	ci right 1.414493e-03	k: 465	n:360000
Cons ci ratio: 7.865265e-04	ci left: 9.853237e-01	ci right 9.861017e-01	k: 354858	n:360000
KS ci ratio: 5.488701e-01	ci left: 1.030877e-04	ci right 1.831036e-04	k: 50	n:360000
PRG4   360000 perm   144 sec   (2494 perm/sec)   p_kst 1.388889e-04   p_cons 9.857167e-01   p_joint 1.291667e-03

Joint ci ratio: 1.797462e-01	ci left: 1.168398e-03	ci right 1.401687e-03	k: 474	n:370000
Cons ci ratio: 7.773974e-04	ci left: 9.852712e-01	ci right 9.860401e-01	k: 364694	n:370000
KS ci ratio: 5.384141e-01	ci left: 1.049641e-04	ci right 1.842962e-04	k: 52	n:370000
PRG4   370000 perm   150 sec   (2470 perm/sec)   p_kst 1.405405e-04   p_cons 9.856595e-01   p_joint 1.281081e-03

Joint ci ratio: 1.795601e-01	ci left: 1.140162e-03	ci right 1.367552e-03	k: 475	n:380000
Cons ci ratio: 7.668553e-04	ci left: 9.852855e-01	ci right 9.860439e-01	k: 374554	n:380000
KS ci ratio: 5.237927e-01	ci left: 1.090374e-04	ci right 1.883908e-04	k: 55	n:380000
PRG4   380000 perm   155 sec   (2447 perm/sec)   p_kst 1.447368e-04   p_cons 9.856684e-01   p_joint 1.250000e-03

Joint ci ratio: 1.775210e-01	ci left: 1.137872e-03	ci right 1.361951e-03	k: 486	n:390000
Cons ci ratio: 7.567305e-04	ci left: 9.852991e-01	ci right 9.860475e-01	k: 384414	n:390000
KS ci ratio: 5.191781e-01	ci left: 1.084679e-04	ci right 1.864592e-04	k: 56	n:390000
PRG4   390000 perm   161 sec   (2424 perm/sec)   p_kst 1.435897e-04   p_cons 9.856769e-01   p_joint 1.246154e-03

Joint ci ratio: 1.786289e-01	ci left: 1.095092e-03	ci right 1.312238e-03	k: 480	n:400000
Cons ci ratio: 7.462019e-04	ci left: 9.853425e-01	ci right 9.860805e-01	k: 394286	n:400000
KS ci ratio: 5.103023e-01	ci left: 1.101064e-04	ci right 1.874421e-04	k: 58	n:400000
PRG4   400000 perm   167 sec   (2402 perm/sec)   p_kst 1.450000e-04   p_cons 9.857150e-01   p_joint 1.200000e-03

Joint ci ratio: 1.769815e-01	ci left: 1.089356e-03	ci right 1.303159e-03	k: 489	n:410000
Cons ci ratio: 7.358402e-04	ci left: 9.853937e-01	ci right 9.861214e-01	k: 404162	n:410000
KS ci ratio: 5.018666e-01	ci left: 1.116758e-04	ci right 1.883665e-04	k: 60	n:410000
PRG4   410000 perm   172 sec   (2380 perm/sec)   p_kst 1.463415e-04   p_cons 9.857610e-01   p_joint 1.192683e-03

Joint ci ratio: 1.764441e-01	ci left: 1.070245e-03	ci right 1.279592e-03	k: 492	n:420000
Cons ci ratio: 7.271869e-04	ci left: 9.853918e-01	ci right 9.861110e-01	k: 414017	n:420000
KS ci ratio: 4.978032e-01	ci left: 1.110974e-04	ci right 1.865606e-04	k: 61	n:420000
PRG4   420000 perm   178 sec   (2358 perm/sec)   p_kst 1.452381e-04   p_cons 9.857548e-01   p_joint 1.171429e-03

Joint ci ratio: 1.812972e-01	ci left: 9.875932e-04	ci right 1.186670e-03	k: 466	n:430000
Cons ci ratio: 7.190697e-04	ci left: 9.853807e-01	ci right 9.860918e-01	k: 423868	n:430000
KS ci ratio: 4.788664e-01	ci left: 1.187098e-04	ci right 1.952708e-04	k: 66	n:430000
PRG4   430000 perm   184 sec   (2337 perm/sec)   p_kst 1.534884e-04   p_cons 9.857395e-01   p_joint 1.083721e-03

Joint ci ratio: 1.809121e-01	ci left: 9.694865e-04	ci right 1.164452e-03	k: 468	n:440000
Cons ci ratio: 7.110453e-04	ci left: 9.853770e-01	ci right 9.860802e-01	k: 433722	n:440000
KS ci ratio: 4.684918e-01	ci left: 1.220159e-04	ci right 1.984593e-04	k: 69	n:440000
PRG4   440000 perm   190 sec   (2316 perm/sec)   p_kst 1.568182e-04   p_cons 9.857318e-01   p_joint 1.063636e-03

Joint ci ratio: 1.795777e-01	ci left: 9.627958e-04	ci right 1.154833e-03	k: 475	n:450000
Cons ci ratio: 7.038385e-04	ci left: 9.853511e-01	ci right 9.860471e-01	k: 443566	n:450000
KS ci ratio: 4.619390e-01	ci left: 1.232277e-04	ci right 1.990111e-04	k: 71	n:450000
PRG4   450000 perm   196 sec   (2294 perm/sec)   p_kst 1.577778e-04   p_cons 9.857022e-01   p_joint 1.055556e-03

Joint ci ratio: 1.795797e-01	ci left: 9.418645e-04	ci right 1.129729e-03	k: 475	n:460000
Cons ci ratio: 6.964682e-04	ci left: 9.853417e-01	ci right 9.860304e-01	k: 453417	n:460000
KS ci ratio: 4.526052e-01	ci left: 1.263193e-04	ci right 2.019529e-04	k: 74	n:460000
PRG4   460000 perm   202 sec   (2273 perm/sec)   p_kst 1.608696e-04   p_cons 9.856891e-01   p_joint 1.032609e-03

Joint ci ratio: 1.775399e-01	ci left: 9.441832e-04	ci right 1.130141e-03	k: 486	n:470000
Cons ci ratio: 6.884407e-04	ci left: 9.853694e-01	ci right 9.860501e-01	k: 463285	n:470000
KS ci ratio: 4.466884e-01	ci left: 1.274049e-04	ci right 2.023902e-04	k: 76	n:470000
PRG4   470000 perm   209 sec   (2249 perm/sec)   p_kst 1.617021e-04   p_cons 9.857128e-01   p_joint 1.034043e-03

Joint ci ratio: 1.768164e-01	ci left: 9.324759e-04	ci right 1.115300e-03	k: 490	n:480000
Cons ci ratio: 6.816904e-04	ci left: 9.853538e-01	ci right 9.860278e-01	k: 473133	n:480000
KS ci ratio: 4.466892e-01	ci left: 1.247506e-04	ci right 1.981738e-04	k: 76	n:480000
PRG4   480000 perm   215 sec   (2228 perm/sec)   p_kst 1.583333e-04   p_cons 9.856938e-01   p_joint 1.020833e-03

Joint ci ratio: 1.753937e-01	ci left: 9.290525e-04	ci right 1.109584e-03	k: 498	n:490000
Cons ci ratio: 6.747921e-04	ci left: 9.853533e-01	ci right 9.860205e-01	k: 482988	n:490000
KS ci ratio: 4.382331e-01	ci left: 1.276450e-04	ci right 2.009298e-04	k: 79	n:490000
PRG4   490000 perm   222 sec   (2203 perm/sec)   p_kst 1.612245e-04   p_cons 9.856898e-01   p_joint 1.016327e-03

Joint ci ratio: 1.736623e-01	ci left: 9.295979e-04	ci right 1.108265e-03	k: 508	n:500000
Cons ci ratio: 6.688562e-04	ci left: 9.853206e-01	ci right 9.859818e-01	k: 492827	n:500000
KS ci ratio: 4.355198e-01	ci left: 1.268720e-04	ci right 1.991300e-04	k: 80	n:500000
PRG4   500000 perm   229 sec   (2180 perm/sec)   p_kst 1.600000e-04   p_cons 9.856540e-01   p_joint 1.016000e-03

Joint ci ratio: 1.750465e-01	ci left: 8.963673e-04	ci right 1.070166e-03	k: 500	n:510000
Cons ci ratio: 6.621525e-04	ci left: 9.853288e-01	ci right 9.859833e-01	k: 502686	n:510000
KS ci ratio: 4.328564e-01	ci left: 1.261307e-04	ci right 1.973993e-04	k: 81	n:510000
PRG4   510000 perm   236 sec   (2161 perm/sec)   p_kst 1.588235e-04   p_cons 9.856588e-01   p_joint 9.803922e-04

Joint ci ratio: 1.876551e-01	ci left: 7.597918e-04	ci right 9.189314e-04	k: 435	n:520000
Cons ci ratio: 6.553341e-04	ci left: 9.853503e-01	ci right 9.859981e-01	k: 512552	n:520000
KS ci ratio: 4.251485e-01	ci left: 1.288514e-04	ci right 1.999918e-04	k: 84	n:520000
PRG4   520000 perm   243 sec   (2141 perm/sec)   p_kst 1.615385e-04   p_cons 9.856769e-01   p_joint 8.365385e-04

Joint ci ratio: 1.868009e-01	ci left: 7.526493e-04	ci right 9.094939e-04	k: 439	n:530000
Cons ci ratio: 6.488078e-04	ci left: 9.853672e-01	ci right 9.860086e-01	k: 522416	n:530000
KS ci ratio: 4.226698e-01	ci left: 1.281057e-04	ci right 1.983053e-04	k: 85	n:530000
PRG4   530000 perm   250 sec   (2121 perm/sec)   p_kst 1.603774e-04   p_cons 9.856906e-01   p_joint 8.283019e-04

Joint ci ratio: 1.851256e-01	ci left: 7.528365e-04	ci right 9.081551e-04	k: 447	n:540000
Cons ci ratio: 6.420076e-04	ci left: 9.854041e-01	ci right 9.860388e-01	k: 532291	n:540000
KS ci ratio: 4.226704e-01	ci left: 1.257333e-04	ci right 1.946331e-04	k: 85	n:540000
PRG4   540000 perm   257 sec   (2104 perm/sec)   p_kst 1.574074e-04   p_cons 9.857241e-01   p_joint 8.277778e-04

Joint ci ratio: 1.830931e-01	ci left: 7.564926e-04	ci right 9.106619e-04	k: 457	n:550000
Cons ci ratio: 6.368928e-04	ci left: 9.853736e-01	ci right 9.860031e-01	k: 542130	n:550000
KS ci ratio: 4.202345e-01	ci left: 1.250726e-04	ci right 1.931043e-04	k: 86	n:550000
PRG4   550000 perm   264 sec   (2087 perm/sec)   p_kst 1.563636e-04   p_cons 9.856909e-01   p_joint 8.309091e-04

Joint ci ratio: 1.813202e-01	ci left: 7.583223e-04	ci right 9.112037e-04	k: 466	n:560000
Cons ci ratio: 6.308567e-04	ci left: 9.853910e-01	ci right 9.860146e-01	k: 551995	n:560000
KS ci ratio: 4.108939e-01	ci left: 1.292352e-04	ci right 1.975415e-04	k: 90	n:560000
PRG4   560000 perm   271 sec   (2070 perm/sec)   p_kst 1.607143e-04   p_cons 9.857054e-01   p_joint 8.321429e-04

Joint ci ratio: 1.801668e-01	ci left: 7.550683e-04	ci right 9.062198e-04	k: 472	n:570000
Cons ci ratio: 6.256889e-04	ci left: 9.853760e-01	ci right 9.859945e-01	k: 561842	n:570000
KS ci ratio: 4.021496e-01	ci left: 1.332679e-04	ci right 2.018071e-04	k: 94	n:570000
PRG4   570000 perm   278 sec   (2053 perm/sec)   p_kst 1.649123e-04   p_cons 9.856877e-01   p_joint 8.280702e-04

Joint ci ratio: 1.782917e-01	ci left: 7.585179e-04	ci right 9.086093e-04	k: 482	n:580000
Cons ci ratio: 6.210996e-04	ci left: 9.853406e-01	ci right 9.859545e-01	k: 571677	n:580000
KS ci ratio: 4.000499e-01	ci left: 1.325204e-04	ci right 2.002249e-04	k: 95	n:580000
PRG4   580000 perm   285 sec   (2036 perm/sec)   p_kst 1.637931e-04   p_cons 9.856500e-01   p_joint 8.310345e-04

Joint ci ratio: 1.768333e-01	ci left: 7.586184e-04	ci right 9.073705e-04	k: 490	n:590000
Cons ci ratio: 6.161265e-04	ci left: 9.853287e-01	ci right 9.859377e-01	k: 581525	n:590000
KS ci ratio: 3.979826e-01	ci left: 1.317991e-04	ci right 1.986955e-04	k: 96	n:590000
PRG4   590000 perm   292 sec   (2020 perm/sec)   p_kst 1.627119e-04   p_cons 9.856356e-01   p_joint 8.305085e-04

Joint ci ratio: 1.752345e-01	ci left: 7.603139e-04	ci right 9.079078e-04	k: 499	n:600000
Cons ci ratio: 6.111265e-04	ci left: 9.853240e-01	ci right 9.859280e-01	k: 591377	n:600000
KS ci ratio: 3.881045e-01	ci left: 1.371123e-04	ci right 2.045366e-04	k: 101	n:600000
PRG4   600000 perm   299 sec   (2004 perm/sec)   p_kst 1.683333e-04   p_cons 9.856283e-01   p_joint 8.316667e-04

Joint ci ratio: 1.745384e-01	ci left: 7.541199e-04	ci right 8.998685e-04	k: 503	n:610000
Cons ci ratio: 6.062112e-04	ci left: 9.853211e-01	ci right 9.859202e-01	k: 601230	n:610000
KS ci ratio: 3.862161e-01	ci left: 1.363443e-04	ci right 2.029817e-04	k: 102	n:610000
PRG4   610000 perm   307 sec   (1989 perm/sec)   p_kst 1.672131e-04   p_cons 9.856230e-01   p_joint 8.245902e-04

Joint ci ratio: 1.773801e-01	ci left: 7.172855e-04	ci right 8.584142e-04	k: 487	n:620000
Cons ci ratio: 6.017545e-04	ci left: 9.853020e-01	ci right 9.858967e-01	k: 611073	n:620000
KS ci ratio: 3.825201e-01	ci left: 1.370593e-04	ci right 2.032438e-04	k: 104	n:620000
PRG4   620000 perm   314 sec   (1974 perm/sec)   p_kst 1.677419e-04   p_cons 9.856016e-01   p_joint 7.854839e-04

Joint ci ratio: 1.779294e-01	ci left: 7.013493e-04	ci right 8.398159e-04	k: 484	n:630000
Cons ci ratio: 5.965255e-04	ci left: 9.853252e-01	ci right 9.859147e-01	k: 620942	n:630000
KS ci ratio: 3.825206e-01	ci left: 1.348837e-04	ci right 2.000178e-04	k: 104	n:630000
PRG4   630000 perm   322 sec   (1959 perm/sec)   p_kst 1.650794e-04   p_cons 9.856222e-01   p_joint 7.682540e-04

Joint ci ratio: 1.770196e-01	ci left: 6.978560e-04	ci right 8.348531e-04	k: 489	n:640000
Cons ci ratio: 5.921145e-04	ci left: 9.853146e-01	ci right 9.858997e-01	k: 630790	n:640000
KS ci ratio: 3.807122e-01	ci left: 1.341888e-04	ci right 1.986042e-04	k: 105	n:640000
PRG4   640000 perm   329 sec   (1945 perm/sec)   p_kst 1.640625e-04   p_cons 9.856094e-01   p_joint 7.640625e-04

Joint ci ratio: 1.759459e-01	ci left: 6.959428e-04	ci right 8.316474e-04	k: 495	n:650000
Cons ci ratio: 5.873216e-04	ci left: 9.853276e-01	ci right 9.859080e-01	k: 640653	n:650000
KS ci ratio: 3.789292e-01	ci left: 1.335159e-04	ci right 1.972335e-04	k: 106	n:650000
PRG4   650000 perm   337 sec   (1930 perm/sec)   p_kst 1.630769e-04   p_cons 9.856200e-01   p_joint 7.615385e-04

Joint ci ratio: 1.747174e-01	ci left: 6.955388e-04	ci right 8.301177e-04	k: 502	n:660000
Cons ci ratio: 5.820505e-04	ci left: 9.853694e-01	ci right 9.859445e-01	k: 650535	n:660000
KS ci ratio: 3.771710e-01	ci left: 1.328641e-04	ci right 1.959036e-04	k: 107	n:660000
PRG4   660000 perm   345 sec   (1915 perm/sec)   p_kst 1.621212e-04   p_cons 9.856591e-01   p_joint 7.606061e-04

Joint ci ratio: 1.757707e-01	ci left: 6.765946e-04	ci right 8.083811e-04	k: 496	n:670000
Cons ci ratio: 5.775556e-04	ci left: 9.853782e-01	ci right 9.859489e-01	k: 660396	n:670000
KS ci ratio: 3.720388e-01	ci left: 1.349371e-04	ci right 1.978769e-04	k: 110	n:670000
PRG4   670000 perm   352 sec   (1901 perm/sec)   p_kst 1.641791e-04   p_cons 9.856657e-01   p_joint 7.402985e-04

Joint ci ratio: 1.754188e-01	ci left: 6.694564e-04	ci right 7.995637e-04	k: 498	n:680000
Cons ci ratio: 5.737597e-04	ci left: 9.853571e-01	ci right 9.859241e-01	k: 670237	n:680000
KS ci ratio: 3.703744e-01	ci left: 1.342862e-04	ci right 1.965741e-04	k: 111	n:680000
PRG4   680000 perm   360 sec   (1887 perm/sec)   p_kst 1.632353e-04   p_cons 9.856426e-01   p_joint 7.323529e-04

Joint ci ratio: 1.745468e-01	ci left: 6.666830e-04	ci right 7.955394e-04	k: 503	n:690000
Cons ci ratio: 5.691612e-04	ci left: 9.853805e-01	ci right 9.859429e-01	k: 680108	n:690000
KS ci ratio: 3.703749e-01	ci left: 1.323399e-04	ci right 1.937253e-04	k: 111	n:690000
PRG4   690000 perm   368 sec   (1873 perm/sec)   p_kst 1.608696e-04   p_cons 9.856638e-01   p_joint 7.289855e-04

Joint ci ratio: 1.319849e-01	ci left: 1.175491e-03	ci right 1.342966e-03	k: 880	n:700000
Cons ci ratio: 5.648991e-04	ci left: 9.853917e-01	ci right 9.859499e-01	k: 689971	n:700000
KS ci ratio: 3.655116e-01	ci left: 1.343389e-04	ci right 1.956380e-04	k: 114	n:700000
PRG4   700000 perm   377 sec   (1859 perm/sec)   p_kst 1.628571e-04   p_cons 9.856729e-01   p_joint 1.257143e-03

Joint ci ratio: 1.100296e-01	ci left: 1.686298e-03	ci right 1.883999e-03	k: 1266	n:710000
Cons ci ratio: 5.613462e-04	ci left: 9.853714e-01	ci right 9.859261e-01	k: 699812	n:710000
KS ci ratio: 3.593154e-01	ci left: 1.375677e-04	ci right 1.990270e-04	k: 118	n:710000
PRG4   710000 perm   386 sec   (1841 perm/sec)   p_kst 1.661972e-04   p_cons 9.856507e-01   p_joint 1.783099e-03

Joint ci ratio: 1.105126e-01	ci left: 1.648019e-03	ci right 1.842136e-03	k: 1255	n:720000
Cons ci ratio: 5.574478e-04	ci left: 9.853726e-01	ci right 9.859234e-01	k: 709668	n:720000
KS ci ratio: 3.578153e-01	ci left: 1.369208e-04	ci right 1.977763e-04	k: 119	n:720000
PRG4   720000 perm   394 sec   (1827 perm/sec)   p_kst 1.652778e-04   p_cons 9.856500e-01   p_joint 1.743056e-03

Joint ci ratio: 1.120434e-01	ci left: 1.580162e-03	ci right 1.769034e-03	k: 1221	n:730000
Cons ci ratio: 5.541654e-04	ci left: 9.853462e-01	ci right 9.858938e-01	k: 719504	n:730000
KS ci ratio: 3.548702e-01	ci left: 1.375396e-04	ci right 1.980510e-04	k: 121	n:730000
PRG4   730000 perm   402 sec   (1814 perm/sec)   p_kst 1.657534e-04   p_cons 9.856219e-01   p_joint 1.672603e-03

Joint ci ratio: 1.114524e-01	ci left: 1.575884e-03	ci right 1.763186e-03	k: 1234	n:740000
Cons ci ratio: 5.500200e-04	ci left: 9.853683e-01	ci right 9.859117e-01	k: 729375	n:740000
KS ci ratio: 3.519967e-01	ci left: 1.381438e-04	ci right 1.983163e-04	k: 123	n:740000
PRG4   740000 perm   411 sec   (1801 perm/sec)   p_kst 1.662162e-04   p_cons 9.856419e-01   p_joint 1.667568e-03

Joint ci ratio: 1.104284e-01	ci left: 1.584689e-03	ci right 1.771194e-03	k: 1257	n:750000
Cons ci ratio: 5.468658e-04	ci left: 9.853426e-01	ci right 9.858829e-01	k: 739211	n:750000
KS ci ratio: 3.491918e-01	ci left: 1.387337e-04	ci right 1.985726e-04	k: 125	n:750000
PRG4   750000 perm   420 sec   (1788 perm/sec)   p_kst 1.666667e-04   p_cons 9.856147e-01   p_joint 1.676000e-03

Joint ci ratio: 1.100361e-01	ci left: 1.575353e-03	ci right 1.760058e-03	k: 1266	n:760000
Cons ci ratio: 5.429317e-04	ci left: 9.853615e-01	ci right 9.858979e-01	k: 749080	n:760000
KS ci ratio: 3.464529e-01	ci left: 1.393100e-04	ci right 1.988204e-04	k: 127	n:760000
PRG4   760000 perm   428 sec   (1775 perm/sec)   p_kst 1.671053e-04   p_cons 9.856316e-01   p_joint 1.665789e-03

Joint ci ratio: 1.094762e-01	ci left: 1.571313e-03	ci right 1.754547e-03	k: 1279	n:770000
Cons ci ratio: 5.395753e-04	ci left: 9.853537e-01	ci right 9.858868e-01	k: 758929	n:770000
KS ci ratio: 3.451076e-01	ci left: 1.386867e-04	ci right 1.976494e-04	k: 128	n:770000
PRG4   770000 perm   437 sec   (1763 perm/sec)   p_kst 1.662338e-04   p_cons 9.856221e-01   p_joint 1.661039e-03

Joint ci ratio: 1.098216e-01	ci left: 1.541192e-03	ci right 1.721516e-03	k: 1271	n:780000
Cons ci ratio: 5.362316e-04	ci left: 9.853487e-01	ci right 9.858785e-01	k: 768780	n:780000
KS ci ratio: 3.411631e-01	ci left: 1.404234e-04	ci right 1.992917e-04	k: 131	n:780000
PRG4   780000 perm   445 sec   (1751 perm/sec)   p_kst 1.679487e-04   p_cons 9.856154e-01   p_joint 1.629487e-03

Joint ci ratio: 1.093502e-01	ci left: 1.535225e-03	ci right 1.714031e-03	k: 1282	n:790000
Cons ci ratio: 5.324972e-04	ci left: 9.853681e-01	ci right 9.858942e-01	k: 778650	n:790000
KS ci ratio: 3.398783e-01	ci left: 1.398035e-04	ci right 1.981427e-04	k: 132	n:790000
PRG4   790000 perm   454 sec   (1740 perm/sec)   p_kst 1.670886e-04   p_cons 9.856329e-01   p_joint 1.622785e-03

Joint ci ratio: 1.088848e-01	ci left: 1.529409e-03	ci right 1.706731e-03	k: 1293	n:800000
Cons ci ratio: 5.288857e-04	ci left: 9.853845e-01	ci right 9.859070e-01	k: 788518	n:800000
KS ci ratio: 3.386078e-01	ci left: 1.391994e-04	ci right 1.970220e-04	k: 133	n:800000
PRG4   800000 perm   463 sec   (1728 perm/sec)   p_kst 1.662500e-04   p_cons 9.856475e-01   p_joint 1.616250e-03

Joint ci ratio: 1.087597e-01	ci left: 1.514130e-03	ci right 1.689465e-03	k: 1296	n:810000
Cons ci ratio: 5.259654e-04	ci left: 9.853668e-01	ci right 9.858865e-01	k: 798359	n:810000
KS ci ratio: 3.336639e-01	ci left: 1.420025e-04	ci right 1.999431e-04	k: 137	n:810000
PRG4   810000 perm   472 sec   (1716 perm/sec)   p_kst 1.691358e-04   p_cons 9.856284e-01   p_joint 1.600000e-03

Joint ci ratio: 1.083017e-01	ci left: 1.508715e-03	ci right 1.682641e-03	k: 1307	n:820000
Cons ci ratio: 5.232718e-04	ci left: 9.853398e-01	ci right 9.858567e-01	k: 808192	n:820000
KS ci ratio: 3.324617e-01	ci left: 1.413883e-04	ci right 1.988259e-04	k: 138	n:820000
PRG4   820000 perm   481 sec   (1705 perm/sec)   p_kst 1.682927e-04   p_cons 9.856000e-01   p_joint 1.593902e-03

Joint ci ratio: 1.079315e-01	ci left: 1.501088e-03	ci right 1.673505e-03	k: 1316	n:830000
Cons ci ratio: 5.198890e-04	ci left: 9.853536e-01	ci right 9.858671e-01	k: 818058	n:830000
KS ci ratio: 3.312723e-01	ci left: 1.407893e-04	ci right 1.977353e-04	k: 139	n:830000
PRG4   830000 perm   490 sec   (1693 perm/sec)   p_kst 1.674699e-04   p_cons 9.856120e-01   p_joint 1.585542e-03

Joint ci ratio: 1.074838e-01	ci left: 1.495960e-03	ci right 1.667031e-03	k: 1327	n:840000
Cons ci ratio: 5.167225e-04	ci left: 9.853586e-01	ci right 9.858690e-01	k: 827917	n:840000
KS ci ratio: 3.300956e-01	ci left: 1.402048e-04	ci right 1.966703e-04	k: 140	n:840000
PRG4   840000 perm   499 sec   (1682 perm/sec)   p_kst 1.666667e-04   p_cons 9.856155e-01   p_joint 1.579762e-03

Joint ci ratio: 1.072425e-01	ci left: 1.485229e-03	ci right 1.654667e-03	k: 1333	n:850000
Cons ci ratio: 5.132293e-04	ci left: 9.853848e-01	ci right 9.858918e-01	k: 837794	n:850000
KS ci ratio: 3.300960e-01	ci left: 1.385553e-04	ci right 1.943565e-04	k: 140	n:850000
PRG4   850000 perm   508 sec   (1672 perm/sec)   p_kst 1.647059e-04   p_cons 9.856400e-01   p_joint 1.568235e-03

Joint ci ratio: 1.070828e-01	ci left: 1.472485e-03	ci right 1.640203e-03	k: 1337	n:860000
Cons ci ratio: 5.106010e-04	ci left: 9.853659e-01	ci right 9.858703e-01	k: 847633	n:860000
KS ci ratio: 3.266391e-01	ci left: 1.401451e-04	ci right 1.958714e-04	k: 143	n:860000
PRG4   860000 perm   518 sec   (1661 perm/sec)   p_kst 1.662791e-04   p_cons 9.856198e-01   p_joint 1.554651e-03

Joint ci ratio: 1.066060e-01	ci left: 1.468984e-03	ci right 1.635512e-03	k: 1349	n:870000
Cons ci ratio: 5.077236e-04	ci left: 9.853637e-01	ci right 9.858652e-01	k: 857486	n:870000
KS ci ratio: 3.221944e-01	ci left: 1.427576e-04	ci right 1.985908e-04	k: 147	n:870000
PRG4   870000 perm   528 sec   (1649 perm/sec)   p_kst 1.689655e-04   p_cons 9.856161e-01   p_joint 1.550575e-03

Joint ci ratio: 1.084738e-01	ci left: 1.401422e-03	ci right 1.563252e-03	k: 1303	n:880000
Cons ci ratio: 5.041858e-04	ci left: 9.854016e-01	ci right 9.858997e-01	k: 867374	n:880000
KS ci ratio: 3.200392e-01	ci left: 1.432249e-04	ci right 1.987894e-04	k: 149	n:880000
PRG4   880000 perm   537 sec   (1638 perm/sec)   p_kst 1.693182e-04   p_cons 9.856523e-01   p_joint 1.480682e-03

Joint ci ratio: 1.078962e-01	ci left: 1.400980e-03	ci right 1.561843e-03	k: 1317	n:890000
Cons ci ratio: 5.015347e-04	ci left: 9.853923e-01	ci right 9.858877e-01	k: 877221	n:890000
KS ci ratio: 3.168858e-01	ci left: 1.447171e-04	ci right 2.001951e-04	k: 152	n:890000
PRG4   890000 perm   547 sec   (1628 perm/sec)   p_kst 1.707865e-04   p_cons 9.856416e-01   p_joint 1.479775e-03

Joint ci ratio: 1.097041e-01	ci left: 1.338934e-03	ci right 1.495415e-03	k: 1274	n:900000
Cons ci ratio: 4.986507e-04	ci left: 9.853988e-01	ci right 9.858914e-01	k: 887082	n:900000
KS ci ratio: 3.148347e-01	ci left: 1.451552e-04	ci right 2.003685e-04	k: 154	n:900000
PRG4   900000 perm   557 sec   (1617 perm/sec)   p_kst 1.711111e-04   p_cons 9.856467e-01   p_joint 1.415556e-03

Joint ci ratio: 1.088533e-01	ci left: 1.345598e-03	ci right 1.501560e-03	k: 1294	n:910000
Cons ci ratio: 4.953147e-04	ci left: 9.854340e-01	ci right 9.859233e-01	k: 896969	n:910000
KS ci ratio: 3.118312e-01	ci left: 1.465976e-04	ci right 2.017217e-04	k: 157	n:910000
PRG4   910000 perm   566 sec   (1607 perm/sec)   p_kst 1.725275e-04   p_cons 9.856802e-01   p_joint 1.421978e-03

Joint ci ratio: 1.093628e-01	ci left: 1.318283e-03	ci right 1.471840e-03	k: 1282	n:920000
Cons ci ratio: 4.927632e-04	ci left: 9.854268e-01	ci right 9.859136e-01	k: 906818	n:920000
KS ci ratio: 3.098761e-01	ci left: 1.470085e-04	ci right 2.018720e-04	k: 159	n:920000
PRG4   920000 perm   576 sec   (1597 perm/sec)   p_kst 1.728261e-04   p_cons 9.856717e-01   p_joint 1.393478e-03

Joint ci ratio: 1.109331e-01	ci left: 1.266463e-03	ci right 1.416241e-03	k: 1246	n:930000
Cons ci ratio: 4.898961e-04	ci left: 9.854404e-01	ci right 9.859243e-01	k: 916686	n:930000
KS ci ratio: 3.089124e-01	ci left: 1.464195e-04	ci right 2.008598e-04	k: 160	n:930000
PRG4   930000 perm   586 sec   (1587 perm/sec)   p_kst 1.720430e-04   p_cons 9.856839e-01   p_joint 1.339785e-03

Joint ci ratio: 1.101844e-01	ci left: 1.270575e-03	ci right 1.419759e-03	k: 1263	n:940000
Cons ci ratio: 4.875923e-04	ci left: 9.854236e-01	ci right 9.859053e-01	k: 926526	n:940000
KS ci ratio: 3.060737e-01	ci left: 1.478072e-04	ci right 2.021600e-04	k: 163	n:940000
PRG4   940000 perm   596 sec   (1577 perm/sec)   p_kst 1.734043e-04   p_cons 9.856660e-01   p_joint 1.343617e-03

Joint ci ratio: 1.109793e-01	ci left: 1.238776e-03	ci right 1.385344e-03	k: 1245	n:950000
Cons ci ratio: 4.847779e-04	ci left: 9.854391e-01	ci right 9.859180e-01	k: 936396	n:950000
KS ci ratio: 3.060740e-01	ci left: 1.462513e-04	ci right 2.000320e-04	k: 163	n:950000
PRG4   950000 perm   606 sec   (1568 perm/sec)   p_kst 1.715789e-04   p_cons 9.856800e-01   p_joint 1.310526e-03

Joint ci ratio: 1.103171e-01	ci left: 1.241065e-03	ci right 1.386971e-03	k: 1260	n:960000
Cons ci ratio: 4.823495e-04	ci left: 9.854343e-01	ci right 9.859107e-01	k: 946247	n:960000
KS ci ratio: 3.024079e-01	ci left: 1.485765e-04	ci right 2.024320e-04	k: 167	n:960000
PRG4   960000 perm   616 sec   (1558 perm/sec)   p_kst 1.739583e-04   p_cons 9.856740e-01   p_joint 1.312500e-03

Joint ci ratio: 1.221966e-01	ci left: 9.950228e-04	ci right 1.125512e-03	k: 1027	n:970000
Cons ci ratio: 4.589459e-04	ci left: 9.866510e-01	ci right 9.871049e-01	k: 957273	n:970000
KS ci ratio: 3.006238e-01	ci left: 1.489507e-04	ci right 2.025625e-04	k: 169	n:970000
PRG4   970000 perm   627 sec   (1548 perm/sec)   p_kst 1.742268e-04   p_cons 9.868794e-01   p_joint 1.058763e-03

Joint ci ratio: 1.213144e-01	ci left: 9.997096e-04	ci right 1.129799e-03	k: 1042	n:980000
Cons ci ratio: 4.566124e-04	ci left: 9.866513e-01	ci right 9.871029e-01	k: 967141	n:980000
KS ci ratio: 2.980056e-01	ci left: 1.502622e-04	ci right 2.037859e-04	k: 172	n:980000
PRG4   980000 perm   637 sec   (1538 perm/sec)   p_kst 1.755102e-04   p_cons 9.868786e-01   p_joint 1.063265e-03

Joint ci ratio: 1.218425e-01	ci left: 9.807965e-04	ci right 1.109020e-03	k: 1033	n:990000
Cons ci ratio: 4.538001e-04	ci left: 9.866812e-01	ci right 9.871301e-01	k: 977038	n:990000
KS ci ratio: 2.971482e-01	ci left: 1.496791e-04	ci right 2.028127e-04	k: 173	n:990000
PRG4   990000 perm   648 sec   (1528 perm/sec)   p_kst 1.747475e-04   p_cons 9.869071e-01   p_joint 1.043434e-03

Joint ci ratio: 1.220204e-01	ci left: 9.680796e-04	ci right 1.094839e-03	k: 1030	n:1000000
Cons ci ratio: 4.514217e-04	ci left: 9.866883e-01	ci right 9.871348e-01	k: 986913	n:1000000
KS ci ratio: 2.946190e-01	ci left: 1.509597e-04	ci right 2.040066e-04	k: 176	n:1000000
PRG4   1000000 perm   659 sec   (1518 perm/sec)   p_kst 1.760000e-04   p_cons 9.869130e-01   p_joint 1.030000e-03

Joint ci ratio: 1.213164e-01	ci left: 9.700143e-04	ci right 1.096242e-03	k: 1042	n:1010000
Cons ci ratio: 4.490973e-04	ci left: 9.866943e-01	ci right 9.871385e-01	k: 996787	n:1010000
KS ci ratio: 2.929684e-01	ci left: 1.512993e-04	ci right 2.041125e-04	k: 178	n:1010000
PRG4   1010000 perm   669 sec   (1509 perm/sec)   p_kst 1.762376e-04   p_cons 9.869178e-01   p_joint 1.031683e-03

Joint ci ratio: 1.209692e-01	ci left: 9.662084e-04	ci right 1.091555e-03	k: 1048	n:1020000
Cons ci ratio: 4.468764e-04	ci left: 9.866962e-01	ci right 9.871382e-01	k: 1006657	n:1020000
KS ci ratio: 2.921536e-01	ci left: 1.507244e-04	ci right 2.031635e-04	k: 179	n:1020000
PRG4   1020000 perm   680 sec   (1500 perm/sec)   p_kst 1.754902e-04   p_cons 9.869186e-01   p_joint 1.027451e-03

Joint ci ratio: 1.202263e-01	ci left: 9.690684e-04	ci right 1.093959e-03	k: 1061	n:1030000
Cons ci ratio: 4.445375e-04	ci left: 9.867069e-01	ci right 9.871466e-01	k: 1016536	n:1030000
KS ci ratio: 2.921539e-01	ci left: 1.492611e-04	ci right 2.011911e-04	k: 179	n:1030000
PRG4   1030000 perm   691 sec   (1491 perm/sec)   p_kst 1.737864e-04   p_cons 9.869282e-01   p_joint 1.030097e-03

Joint ci ratio: 1.198322e-01	ci left: 9.662790e-04	ci right 1.090373e-03	k: 1068	n:1040000
Cons ci ratio: 4.423667e-04	ci left: 9.867097e-01	ci right 9.871472e-01	k: 1026407	n:1040000
KS ci ratio: 2.921541e-01	ci left: 1.478258e-04	ci right 1.992566e-04	k: 179	n:1040000
PRG4   1040000 perm   701 sec   (1483 perm/sec)   p_kst 1.721154e-04   p_cons 9.869298e-01   p_joint 1.026923e-03

Joint ci ratio: 1.199452e-01	ci left: 9.552284e-04	ci right 1.078027e-03	k: 1066	n:1050000
Cons ci ratio: 4.402598e-04	ci left: 9.867105e-01	ci right 9.871459e-01	k: 1036276	n:1050000
KS ci ratio: 2.913461e-01	ci left: 1.473007e-04	ci right 1.983808e-04	k: 180	n:1050000
PRG4   1050000 perm   712 sec   (1474 perm/sec)   p_kst 1.714286e-04   p_cons 9.869295e-01   p_joint 1.015238e-03

Joint ci ratio: 1.193316e-01	ci left: 9.562837e-04	ci right 1.078545e-03	k: 1077	n:1060000
Cons ci ratio: 4.383430e-04	ci left: 9.867017e-01	ci right 9.871352e-01	k: 1046135	n:1060000
KS ci ratio: 2.905446e-01	ci left: 1.467856e-04	ci right 1.975213e-04	k: 181	n:1060000
PRG4   1060000 perm   724 sec   (1465 perm/sec)   p_kst 1.707547e-04   p_cons 9.869198e-01   p_joint 1.016038e-03

Joint ci ratio: 1.212617e-01	ci left: 9.165257e-04	ci right 1.035735e-03	k: 1043	n:1070000
Cons ci ratio: 4.363086e-04	ci left: 9.867016e-01	ci right 9.871331e-01	k: 1056003	n:1070000
KS ci ratio: 2.881791e-01	ci left: 1.480140e-04	ci right 1.986820e-04	k: 184	n:1070000
PRG4   1070000 perm   735 sec   (1457 perm/sec)   p_kst 1.719626e-04   p_cons 9.869187e-01   p_joint 9.747664e-04

Joint ci ratio: 1.212622e-01	ci left: 9.080391e-04	ci right 1.026145e-03	k: 1043	n:1080000
Cons ci ratio: 4.342712e-04	ci left: 9.867034e-01	ci right 9.871329e-01	k: 1065873	n:1080000
KS ci ratio: 2.881793e-01	ci left: 1.466435e-04	ci right 1.968423e-04	k: 184	n:1080000
PRG4   1080000 perm   746 sec   (1448 perm/sec)   p_kst 1.703704e-04   p_cons 9.869194e-01   p_joint 9.657407e-04

Joint ci ratio: 1.207430e-01	ci left: 9.077154e-04	ci right 1.025238e-03	k: 1052	n:1090000
Cons ci ratio: 4.322620e-04	ci left: 9.867051e-01	ci right 9.871326e-01	k: 1075743	n:1090000
KS ci ratio: 2.866341e-01	ci left: 1.470008e-04	ci right 1.970032e-04	k: 186	n:1090000
PRG4   1090000 perm   757 sec   (1440 perm/sec)   p_kst 1.706422e-04   p_cons 9.869202e-01   p_joint 9.651376e-04

Joint ci ratio: 1.202870e-01	ci left: 9.065169e-04	ci right 1.023409e-03	k: 1060	n:1100000
Cons ci ratio: 4.303411e-04	ci left: 9.867032e-01	ci right 9.871288e-01	k: 1085609	n:1100000
KS ci ratio: 2.851134e-01	ci left: 1.473523e-04	ci right 1.971605e-04	k: 188	n:1100000
PRG4   1100000 perm   768 sec   (1432 perm/sec)   p_kst 1.709091e-04   p_cons 9.869173e-01   p_joint 9.636364e-04

Joint ci ratio: 1.193898e-01	ci left: 9.123326e-04	ci right 1.029035e-03	k: 1076	n:1110000
Cons ci ratio: 4.284903e-04	ci left: 9.866986e-01	ci right 9.871223e-01	k: 1095472	n:1110000
KS ci ratio: 2.836167e-01	ci left: 1.476981e-04	ci right 1.973142e-04	k: 190	n:1110000
PRG4   1110000 perm   780 sec   (1424 perm/sec)   p_kst 1.711712e-04   p_cons 9.869117e-01   p_joint 9.693694e-04

Joint ci ratio: 1.198928e-01	ci left: 8.963911e-04	ci right 1.011572e-03	k: 1067	n:1120000
Cons ci ratio: 4.264420e-04	ci left: 9.867075e-01	ci right 9.871293e-01	k: 1105350	n:1120000
KS ci ratio: 2.821433e-01	ci left: 1.480384e-04	ci right 1.974645e-04	k: 192	n:1120000
PRG4   1120000 perm   791 sec   (1416 perm/sec)   p_kst 1.714286e-04   p_cons 9.869196e-01   p_joint 9.526786e-04

Joint ci ratio: 1.193908e-01	ci left: 8.961847e-04	ci right 1.010823e-03	k: 1076	n:1130000
Cons ci ratio: 4.247428e-04	ci left: 9.866967e-01	ci right 9.871167e-01	k: 1115206	n:1130000
KS ci ratio: 2.806927e-01	ci left: 1.483733e-04	ci right 1.976115e-04	k: 194	n:1130000
PRG4   1130000 perm   803 sec   (1407 perm/sec)   p_kst 1.716814e-04   p_cons 9.869080e-01   p_joint 9.522124e-04

Joint ci ratio: 1.189499e-01	ci left: 8.951317e-04	ci right 1.009183e-03	k: 1084	n:1140000
Cons ci ratio: 4.228481e-04	ci left: 9.866993e-01	ci right 9.871175e-01	k: 1125077	n:1140000
KS ci ratio: 2.799758e-01	ci left: 1.478873e-04	ci right 1.968168e-04	k: 195	n:1140000
PRG4   1140000 perm   815 sec   (1400 perm/sec)   p_kst 1.710526e-04   p_cons 9.869096e-01   p_joint 9.508772e-04

Joint ci ratio: 1.184597e-01	ci left: 8.949417e-04	ci right 1.008466e-03	k: 1093	n:1150000
Cons ci ratio: 4.208793e-04	ci left: 9.867080e-01	ci right 9.871243e-01	k: 1134955	n:1150000
KS ci ratio: 2.799760e-01	ci left: 1.466014e-04	ci right 1.951054e-04	k: 195	n:1150000
PRG4   1150000 perm   826 sec   (1392 perm/sec)   p_kst 1.695652e-04   p_cons 9.869174e-01   p_joint 9.504348e-04

Joint ci ratio: 1.179219e-01	ci left: 8.955925e-04	ci right 1.008647e-03	k: 1103	n:1160000
Cons ci ratio: 4.191475e-04	ci left: 9.867036e-01	ci right 9.871181e-01	k: 1144818	n:1160000
KS ci ratio: 2.778575e-01	ci left: 1.477429e-04	ci right 1.961900e-04	k: 198	n:1160000
PRG4   1160000 perm   838 sec   (1384 perm/sec)   p_kst 1.706897e-04   p_cons 9.869121e-01   p_joint 9.508621e-04

Joint ci ratio: 1.185692e-01	ci left: 8.779843e-04	ci right 9.894673e-04	k: 1091	n:1170000
Cons ci ratio: 4.175473e-04	ci left: 9.866923e-01	ci right 9.871052e-01	k: 1154673	n:1170000
KS ci ratio: 2.778577e-01	ci left: 1.464801e-04	ci right 1.945132e-04	k: 198	n:1170000
PRG4   1170000 perm   850 sec   (1376 perm/sec)   p_kst 1.692308e-04   p_cons 9.869000e-01   p_joint 9.324786e-04

Joint ci ratio: 1.189519e-01	ci left: 8.647875e-04	ci right 9.749740e-04	k: 1084	n:1180000
Cons ci ratio: 4.158150e-04	ci left: 9.866907e-01	ci right 9.871019e-01	k: 1164539	n:1180000
KS ci ratio: 2.737608e-01	ci left: 1.499720e-04	ci right 1.983002e-04	k: 204	n:1180000
PRG4   1180000 perm   862 sec   (1369 perm/sec)   p_kst 1.728814e-04   p_cons 9.868975e-01   p_joint 9.186441e-04

Joint ci ratio: 1.184616e-01	ci left: 8.648588e-04	ci right 9.745685e-04	k: 1093	n:1190000
Cons ci ratio: 4.141848e-04	ci left: 9.866839e-01	ci right 9.870935e-01	k: 1174399	n:1190000
KS ci ratio: 2.704817e-01	ci left: 1.526268e-04	ci right 2.011214e-04	k: 209	n:1190000
PRG4   1190000 perm   874 sec   (1361 perm/sec)   p_kst 1.756303e-04   p_cons 9.868899e-01   p_joint 9.184874e-04

Joint ci ratio: 1.180845e-01	ci left: 8.633124e-04	ci right 9.724529e-04	k: 1100	n:1200000
Cons ci ratio: 4.124407e-04	ci left: 9.866857e-01	ci right 9.870936e-01	k: 1184269	n:1200000
KS ci ratio: 2.698401e-01	ci left: 1.521318e-04	ci right 2.003351e-04	k: 210	n:1200000
PRG4   1200000 perm   886 sec   (1354 perm/sec)   p_kst 1.750000e-04   p_cons 9.868908e-01   p_joint 9.166667e-04

Joint ci ratio: 1.178175e-01	ci left: 8.601878e-04	ci right 9.686703e-04	k: 1105	n:1210000
Cons ci ratio: 4.109807e-04	ci left: 9.866708e-01	ci right 9.870772e-01	k: 1194119	n:1210000
KS ci ratio: 2.692030e-01	ci left: 1.516451e-04	ci right 1.995616e-04	k: 211	n:1210000
PRG4   1210000 perm   898 sec   (1347 perm/sec)   p_kst 1.743802e-04   p_cons 9.868752e-01   p_joint 9.132231e-04

Joint ci ratio: 1.177647e-01	ci left: 8.539324e-04	ci right 9.615744e-04	k: 1106	n:1220000
Cons ci ratio: 4.092119e-04	ci left: 9.866768e-01	ci right 9.870815e-01	k: 1203994	n:1220000
KS ci ratio: 2.679421e-01	ci left: 1.519311e-04	ci right 1.996753e-04	k: 213	n:1220000
PRG4   1220000 perm   911 sec   (1340 perm/sec)   p_kst 1.745902e-04   p_cons 9.868803e-01   p_joint 9.065574e-04

Joint ci ratio: 1.171838e-01	ci left: 8.556702e-04	ci right 9.629624e-04	k: 1117	n:1230000
Cons ci ratio: 4.073505e-04	ci left: 9.866901e-01	ci right 9.870929e-01	k: 1213878	n:1230000
KS ci ratio: 2.673183e-01	ci left: 1.514543e-04	ci right 1.989193e-04	k: 214	n:1230000
PRG4   1230000 perm   923 sec   (1332 perm/sec)   p_kst 1.739837e-04   p_cons 9.868927e-01   p_joint 9.081301e-04

Joint ci ratio: 1.168707e-01	ci left: 8.534667e-04	ci right 9.601770e-04	k: 1123	n:1240000
Cons ci ratio: 4.057415e-04	ci left: 9.866886e-01	ci right 9.870898e-01	k: 1223744	n:1240000
KS ci ratio: 2.660835e-01	ci left: 1.517380e-04	ci right 1.990356e-04	k: 216	n:1240000
PRG4   1240000 perm   935 sec   (1326 perm/sec)   p_kst 1.741935e-04   p_cons 9.868903e-01   p_joint 9.056452e-04

Joint ci ratio: 1.166119e-01	ci left: 8.505221e-04	ci right 9.566124e-04	k: 1128	n:1250000
Cons ci ratio: 4.039390e-04	ci left: 9.867008e-01	ci right 9.871002e-01	k: 1233627	n:1250000
KS ci ratio: 2.660837e-01	ci left: 1.505241e-04	ci right 1.974434e-04	k: 216	n:1250000
PRG4   1250000 perm   948 sec   (1319 perm/sec)   p_kst 1.728000e-04   p_cons 9.869016e-01   p_joint 9.024000e-04

Joint ci ratio: 1.158953e-01	ci left: 8.545600e-04	ci right 9.604542e-04	k: 1142	n:1260000
Cons ci ratio: 4.023207e-04	ci left: 9.867023e-01	ci right 9.871002e-01	k: 1243497	n:1260000
KS ci ratio: 2.654728e-01	ci left: 1.500702e-04	ci right 1.967228e-04	k: 217	n:1260000
PRG4   1260000 perm   961 sec   (1312 perm/sec)   p_kst 1.722222e-04   p_cons 9.869024e-01   p_joint 9.063492e-04

Joint ci ratio: 1.151419e-01	ci left: 8.593011e-04	ci right 9.650436e-04	k: 1157	n:1270000
Cons ci ratio: 4.008192e-04	ci left: 9.866976e-01	ci right 9.870939e-01	k: 1253359	n:1270000
KS ci ratio: 2.642634e-01	ci left: 1.503588e-04	ci right 1.968529e-04	k: 219	n:1270000
PRG4   1270000 perm   973 sec   (1305 perm/sec)   p_kst 1.724409e-04   p_cons 9.868969e-01   p_joint 9.110236e-04

Joint ci ratio: 1.145988e-01	ci left: 8.609347e-04	ci right 9.663447e-04	k: 1168	n:1280000
Cons ci ratio: 3.992620e-04	ci left: 9.866976e-01	ci right 9.870924e-01	k: 1263227	n:1280000
KS ci ratio: 2.642635e-01	ci left: 1.491841e-04	ci right 1.953150e-04	k: 219	n:1280000
PRG4   1280000 perm   986 sec   (1298 perm/sec)   p_kst 1.710937e-04   p_cons 9.868961e-01   p_joint 9.125000e-04

Joint ci ratio: 1.150930e-01	ci left: 8.467311e-04	ci right 9.508795e-04	k: 1158	n:1290000
Cons ci ratio: 3.978063e-04	ci left: 9.866922e-01	ci right 9.870855e-01	k: 1273088	n:1290000
KS ci ratio: 2.630704e-01	ci left: 1.494756e-04	ci right 1.954535e-04	k: 221	n:1290000
PRG4   1290000 perm   999 sec   (1291 perm/sec)   p_kst 1.713178e-04   p_cons 9.868899e-01   p_joint 8.976744e-04

Joint ci ratio: 1.147471e-01	ci left: 8.454476e-04	ci right 9.491044e-04	k: 1165	n:1300000
Cons ci ratio: 3.960482e-04	ci left: 9.867077e-01	ci right 9.870993e-01	k: 1282976	n:1300000
KS ci ratio: 2.613106e-01	ci left: 1.504818e-04	ci right 1.964091e-04	k: 224	n:1300000
PRG4   1300000 perm   1012 sec   (1285 perm/sec)   p_kst 1.723077e-04   p_cons 9.869046e-01   p_joint 8.961538e-04

Joint ci ratio: 1.150938e-01	ci left: 8.338036e-04	ci right 9.363627e-04	k: 1158	n:1310000
Cons ci ratio: 3.944059e-04	ci left: 9.867169e-01	ci right 9.871069e-01	k: 1292856	n:1310000
KS ci ratio: 2.607319e-01	ci left: 1.500465e-04	ci right 1.957230e-04	k: 225	n:1310000
PRG4   1310000 perm   1025 sec   (1278 perm/sec)   p_kst 1.717557e-04   p_cons 9.869130e-01   p_joint 8.839695e-04

Joint ci ratio: 1.167700e-01	ci left: 8.032111e-04	ci right 9.035453e-04	k: 1125	n:1320000
Cons ci ratio: 3.929105e-04	ci left: 9.867176e-01	ci right 9.871061e-01	k: 1302725	n:1320000
KS ci ratio: 2.607321e-01	ci left: 1.489098e-04	ci right 1.942402e-04	k: 225	n:1320000
PRG4   1320000 perm   1038 sec   (1271 perm/sec)   p_kst 1.704545e-04   p_cons 9.869129e-01   p_joint 8.522727e-04

Joint ci ratio: 9.821796e-02	ci left: 1.137475e-03	ci right 1.255692e-03	k: 1590	n:1330000
Cons ci ratio: 3.913295e-04	ci left: 9.867250e-01	ci right 9.871120e-01	k: 1312603	n:1330000
KS ci ratio: 2.412353e-01	ci left: 1.745675e-04	ci right 2.231415e-04	k: 263	n:1330000
PRG4   1330000 perm   1052 sec   (1265 perm/sec)   p_kst 1.977444e-04   p_cons 9.869195e-01   p_joint 1.195489e-03

Joint ci ratio: 9.781909e-02	ci left: 1.138450e-03	ci right 1.256260e-03	k: 1603	n:1340000
Cons ci ratio: 3.897334e-04	ci left: 9.867346e-01	ci right 9.871200e-01	k: 1322484	n:1340000
KS ci ratio: 2.407798e-01	ci left: 1.739660e-04	ci right 2.222675e-04	k: 264	n:1340000
PRG4   1340000 perm   1065 sec   (1259 perm/sec)   p_kst 1.970149e-04   p_cons 9.869284e-01   p_joint 1.196269e-03

Joint ci ratio: 9.748543e-02	ci left: 1.137966e-03	ci right 1.255302e-03	k: 1614	n:1350000
Cons ci ratio: 3.884464e-04	ci left: 9.867247e-01	ci right 9.871088e-01	k: 1332339	n:1350000
KS ci ratio: 2.403269e-01	ci left: 1.733734e-04	ci right 2.214064e-04	k: 265	n:1350000
PRG4   1350000 perm   1078 sec   (1253 perm/sec)   p_kst 1.962963e-04   p_cons 9.869178e-01   p_joint 1.195556e-03

Joint ci ratio: 9.712526e-02	ci left: 1.138208e-03	ci right 1.255110e-03	k: 1626	n:1360000
Cons ci ratio: 3.868853e-04	ci left: 9.867342e-01	ci right 9.871167e-01	k: 1342220	n:1360000
KS ci ratio: 2.389829e-01	ci left: 1.741721e-04	ci right 2.221165e-04	k: 268	n:1360000
PRG4   1360000 perm   1091 sec   (1247 perm/sec)   p_kst 1.970588e-04   p_cons 9.869265e-01   p_joint 1.195588e-03

Joint ci ratio: 9.671000e-02	ci left: 1.139871e-03	ci right 1.256415e-03	k: 1640	n:1370000
Cons ci ratio: 3.854517e-04	ci left: 9.867361e-01	ci right 9.871173e-01	k: 1352091	n:1370000
KS ci ratio: 2.380994e-01	ci left: 1.742734e-04	ci right 2.220421e-04	k: 270	n:1370000
PRG4   1370000 perm   1104 sec   (1241 perm/sec)   p_kst 1.970803e-04   p_cons 9.869277e-01   p_joint 1.197080e-03

Joint ci ratio: 9.682864e-02	ci left: 1.128782e-03	ci right 1.244342e-03	k: 1636	n:1380000
Cons ci ratio: 3.840447e-04	ci left: 9.867374e-01	ci right 9.871171e-01	k: 1361961	n:1380000
KS ci ratio: 2.376614e-01	ci left: 1.736920e-04	ci right 2.212009e-04	k: 271	n:1380000
PRG4   1380000 perm   1117 sec   (1235 perm/sec)   p_kst 1.963768e-04   p_cons 9.869283e-01   p_joint 1.185507e-03

Joint ci ratio: 9.745691e-02	ci left: 1.105920e-03	ci right 1.219916e-03	k: 1615	n:1390000
Cons ci ratio: 3.827171e-04	ci left: 9.867342e-01	ci right 9.871127e-01	k: 1371825	n:1390000
KS ci ratio: 2.367924e-01	ci left: 1.737957e-04	ci right 2.211337e-04	k: 273	n:1390000
PRG4   1390000 perm   1131 sec   (1229 perm/sec)   p_kst 1.964029e-04   p_cons 9.869245e-01   p_joint 1.161871e-03

Joint ci ratio: 9.763895e-02	ci left: 1.093839e-03	ci right 1.206812e-03	k: 1609	n:1400000
Cons ci ratio: 3.814664e-04	ci left: 9.867268e-01	ci right 9.871040e-01	k: 1381683	n:1400000
KS ci ratio: 2.359329e-01	ci left: 1.738983e-04	ci right 2.210672e-04	k: 275	n:1400000
PRG4   1400000 perm   1144 sec   (1224 perm/sec)   p_kst 1.964286e-04   p_cons 9.869164e-01   p_joint 1.149286e-03

Joint ci ratio: 1.203565e-01	ci left: 7.065195e-04	ci right 7.976790e-04	k: 1059	n:1410000
Cons ci ratio: 3.799876e-04	ci left: 9.867360e-01	ci right 9.871117e-01	k: 1391564	n:1410000
KS ci ratio: 2.514464e-01	ci left: 1.506881e-04	ci right 1.946706e-04	k: 242	n:1410000
PRG4   1410000 perm   1158 sec   (1218 perm/sec)   p_kst 1.716312e-04   p_cons 9.869248e-01   p_joint 7.510638e-04

Joint ci ratio: 1.200174e-01	ci left: 7.056423e-04	ci right 7.964139e-04	k: 1065	n:1420000
Cons ci ratio: 3.787014e-04	ci left: 9.867329e-01	ci right 9.871074e-01	k: 1401428	n:1420000
KS ci ratio: 2.509306e-01	ci left: 1.502868e-04	ci right 1.940481e-04	k: 243	n:1420000
PRG4   1420000 perm   1171 sec   (1213 perm/sec)   p_kst 1.711268e-04   p_cons 9.869211e-01   p_joint 7.500000e-04

Joint ci ratio: 1.197370e-01	ci left: 7.040994e-04	ci right 7.944459e-04	k: 1070	n:1430000
Cons ci ratio: 3.774588e-04	ci left: 9.867278e-01	ci right 9.871010e-01	k: 1411289	n:1430000
KS ci ratio: 2.504181e-01	ci left: 1.498912e-04	ci right 1.934343e-04	k: 244	n:1430000
PRG4   1430000 perm   1184 sec   (1207 perm/sec)   p_kst 1.706294e-04   p_cons 9.869154e-01   p_joint 7.482517e-04

Joint ci ratio: 1.192923e-01	ci left: 7.045993e-04	ci right 7.946505e-04	k: 1078	n:1440000
Cons ci ratio: 3.761676e-04	ci left: 9.867269e-01	ci right 9.870989e-01	k: 1421156	n:1440000
KS ci ratio: 2.488987e-01	ci left: 1.508033e-04	ci right 1.943044e-04	k: 247	n:1440000
PRG4   1440000 perm   1198 sec   (1202 perm/sec)   p_kst 1.715278e-04   p_cons 9.869139e-01   p_joint 7.486111e-04

Joint ci ratio: 1.189072e-01	ci left: 7.044238e-04	ci right 7.941415e-04	k: 1085	n:1450000
Cons ci ratio: 3.747795e-04	ci left: 9.867337e-01	ci right 9.871043e-01	k: 1431034	n:1450000
KS ci ratio: 2.483985e-01	ci left: 1.504099e-04	ci right 1.936969e-04	k: 248	n:1450000
PRG4   1450000 perm   1212 sec   (1197 perm/sec)   p_kst 1.710345e-04   p_cons 9.869200e-01   p_joint 7.482759e-04

Joint ci ratio: 1.065211e-01	ci left: 8.773394e-04	ci right 9.767123e-04	k: 1352	n:1460000
Cons ci ratio: 3.734660e-04	ci left: 9.867363e-01	ci right 9.871056e-01	k: 1440906	n:1460000
KS ci ratio: 2.479013e-01	ci left: 1.500221e-04	ci right 1.930977e-04	k: 249	n:1460000
PRG4   1460000 perm   1226 sec   (1191 perm/sec)   p_kst 1.705479e-04   p_cons 9.869219e-01   p_joint 9.260274e-04

Joint ci ratio: 1.061686e-01	ci left: 8.773307e-04	ci right 9.763532e-04	k: 1361	n:1470000
Cons ci ratio: 3.722054e-04	ci left: 9.867361e-01	ci right 9.871041e-01	k: 1450774	n:1470000
KS ci ratio: 2.459413e-01	ci left: 1.515543e-04	ci right 1.946732e-04	k: 253	n:1470000
PRG4   1470000 perm   1240 sec   (1186 perm/sec)   p_kst 1.721088e-04   p_cons 9.869211e-01   p_joint 9.258503e-04

Joint ci ratio: 1.057039e-01	ci left: 8.792961e-04	ci right 9.780790e-04	k: 1373	n:1480000
Cons ci ratio: 3.708507e-04	ci left: 9.867434e-01	ci right 9.871101e-01	k: 1460653	n:1480000
KS ci ratio: 2.440272e-01	ci left: 1.530671e-04	ci right 1.962261e-04	k: 257	n:1480000
PRG4   1480000 perm   1254 sec   (1180 perm/sec)   p_kst 1.736486e-04   p_cons 9.869277e-01   p_joint 9.277027e-04

Joint ci ratio: 1.053594e-01	ci left: 8.792757e-04	ci right 9.777144e-04	k: 1382	n:1490000
Cons ci ratio: 3.696741e-04	ci left: 9.867391e-01	ci right 9.871046e-01	k: 1470515	n:1490000
KS ci ratio: 2.435557e-01	ci left: 1.526699e-04	ci right 1.956212e-04	k: 258	n:1490000
PRG4   1490000 perm   1268 sec   (1175 perm/sec)   p_kst 1.731544e-04   p_cons 9.869228e-01   p_joint 9.275168e-04

Joint ci ratio: 1.015026e-01	ci left: 9.429040e-04	ci right 1.044372e-03	k: 1489	n:1500000
Cons ci ratio: 3.529360e-04	ci left: 9.878117e-01	ci right 9.881611e-01	k: 1481981	n:1500000
KS ci ratio: 2.430869e-01	ci left: 1.522781e-04	ci right 1.950243e-04	k: 259	n:1500000
PRG4   1500000 perm   1282 sec   (1170 perm/sec)   p_kst 1.726667e-04   p_cons 9.879873e-01   p_joint 9.926667e-04

Joint ci ratio: 1.013328e-01	ci left: 9.398868e-04	ci right 1.040851e-03	k: 1494	n:1510000
Cons ci ratio: 3.519407e-04	ci left: 9.878004e-01	ci right 9.881487e-01	k: 1491843	n:1510000
KS ci ratio: 2.426209e-01	ci left: 1.518916e-04	ci right 1.944352e-04	k: 260	n:1510000
PRG4   1510000 perm   1296 sec   (1165 perm/sec)   p_kst 1.721854e-04   p_cons 9.879755e-01   p_joint 9.894040e-04

Joint ci ratio: 1.026827e-01	ci left: 9.086993e-04	ci right 1.007692e-03	k: 1455	n:1520000
Cons ci ratio: 3.505357e-04	ci left: 9.878177e-01	ci right 9.881647e-01	k: 1501748	n:1520000
KS ci ratio: 2.421575e-01	ci left: 1.515103e-04	ci right 1.938538e-04	k: 261	n:1520000
PRG4   1520000 perm   1310 sec   (1160 perm/sec)   p_kst 1.717105e-04   p_cons 9.879921e-01   p_joint 9.572368e-04

Joint ci ratio: 1.023668e-01	ci left: 9.084916e-04	ci right 1.007139e-03	k: 1464	n:1530000
Cons ci ratio: 3.494356e-04	ci left: 9.878150e-01	ci right 9.881609e-01	k: 1511623	n:1530000
KS ci ratio: 2.421576e-01	ci left: 1.505200e-04	ci right 1.925868e-04	k: 261	n:1530000
PRG4   1530000 perm   1325 sec   (1155 perm/sec)   p_kst 1.705882e-04   p_cons 9.879889e-01   p_joint 9.568627e-04

Joint ci ratio: 1.041617e-01	ci left: 8.709624e-04	ci right 9.672941e-04	k: 1414	n:1540000
Cons ci ratio: 3.482028e-04	ci left: 9.878222e-01	ci right 9.881669e-01	k: 1521513	n:1540000
KS ci ratio: 2.403298e-01	ci left: 1.519830e-04	ci right 1.940903e-04	k: 265	n:1540000
PRG4   1540000 perm   1339 sec   (1150 perm/sec)   p_kst 1.720779e-04   p_cons 9.879955e-01   p_joint 9.181818e-04

Joint ci ratio: 1.037956e-01	ci left: 8.716271e-04	ci right 9.676728e-04	k: 1424	n:1550000
Cons ci ratio: 3.469168e-04	ci left: 9.878338e-01	ci right 9.881772e-01	k: 1531410	n:1550000
KS ci ratio: 2.394313e-01	ci left: 1.522152e-04	ci right 1.942059e-04	k: 267	n:1550000
PRG4   1550000 perm   1354 sec   (1145 perm/sec)   p_kst 1.722581e-04   p_cons 9.880065e-01   p_joint 9.187097e-04

Joint ci ratio: 1.036867e-01	ci left: 8.679128e-04	ci right 9.634428e-04	k: 1427	n:1560000
Cons ci ratio: 3.458410e-04	ci left: 9.878318e-01	ci right 9.881741e-01	k: 1541286	n:1560000
KS ci ratio: 2.385429e-01	ci left: 1.524448e-04	ci right 1.943196e-04	k: 269	n:1560000
PRG4   1560000 perm   1369 sec   (1140 perm/sec)   p_kst 1.724359e-04   p_cons 9.880038e-01   p_joint 9.147436e-04

Joint ci ratio: 1.033975e-01	ci left: 8.673483e-04	ci right 9.625337e-04	k: 1435	n:1570000
Cons ci ratio: 3.447567e-04	ci left: 9.878310e-01	ci right 9.881723e-01	k: 1551164	n:1570000
KS ci ratio: 2.376642e-01	ci left: 1.526717e-04	ci right 1.944317e-04	k: 271	n:1570000
PRG4   1570000 perm   1383 sec   (1135 perm/sec)   p_kst 1.726115e-04   p_cons 9.880025e-01   p_joint 9.140127e-04

Joint ci ratio: 1.029681e-01	ci left: 8.692577e-04	ci right 9.642325e-04	k: 1447	n:1580000
Cons ci ratio: 3.435999e-04	ci left: 9.878360e-01	ci right 9.881761e-01	k: 1561051	n:1580000
KS ci ratio: 2.363642e-01	ci left: 1.534914e-04	ci right 1.952123e-04	k: 274	n:1580000
PRG4   1580000 perm   1398 sec   (1130 perm/sec)   p_kst 1.734177e-04   p_cons 9.880070e-01   p_joint 9.158228e-04

Joint ci ratio: 1.025439e-01	ci left: 8.711440e-04	ci right 9.659092e-04	k: 1459	n:1590000
Cons ci ratio: 3.423546e-04	ci left: 9.878479e-01	ci right 9.881868e-01	k: 1570949	n:1590000
KS ci ratio: 2.350853e-01	ci left: 1.543014e-04	ci right 1.959826e-04	k: 277	n:1590000
PRG4   1590000 perm   1413 sec   (1125 perm/sec)   p_kst 1.742138e-04   p_cons 9.880182e-01   p_joint 9.176101e-04

Joint ci ratio: 1.050213e-01	ci left: 8.243013e-04	ci right 9.162709e-04	k: 1391	n:1600000
Cons ci ratio: 3.413928e-04	ci left: 9.878408e-01	ci right 9.881787e-01	k: 1580817	n:1600000
KS ci ratio: 2.338270e-01	ci left: 1.551019e-04	ci right 1.967426e-04	k: 280	n:1600000
PRG4   1600000 perm   1429 sec   (1120 perm/sec)   p_kst 1.750000e-04   p_cons 9.880106e-01   p_joint 8.693750e-04

Joint ci ratio: 1.046834e-01	ci left: 8.246248e-04	ci right 9.163164e-04	k: 1400	n:1610000
Cons ci ratio: 3.404923e-04	ci left: 9.878300e-01	ci right 9.881670e-01	k: 1590679	n:1610000
KS ci ratio: 2.334121e-01	ci left: 1.547233e-04	ci right 1.961780e-04	k: 281	n:1610000
PRG4   1610000 perm   1444 sec   (1115 perm/sec)   p_kst 1.745342e-04   p_cons 9.879994e-01   p_joint 8.695652e-04

Joint ci ratio: 1.044229e-01	ci left: 8.237425e-04	ci right 9.150940e-04	k: 1407	n:1620000
Cons ci ratio: 3.395457e-04	ci left: 9.878231e-01	ci right 9.881591e-01	k: 1600547	n:1620000
KS ci ratio: 2.334122e-01	ci left: 1.537682e-04	ci right 1.949671e-04	k: 281	n:1620000
PRG4   1620000 perm   1460 sec   (1110 perm/sec)   p_kst 1.734568e-04   p_cons 9.879920e-01   p_joint 8.685185e-04

Joint ci ratio: 1.041644e-01	ci left: 8.228714e-04	ci right 9.138864e-04	k: 1414	n:1630000
Cons ci ratio: 3.386156e-04	ci left: 9.878156e-01	ci right 9.881508e-01	k: 1610414	n:1630000
KS ci ratio: 2.329995e-01	ci left: 1.534025e-04	ci right 1.944202e-04	k: 282	n:1630000
PRG4   1630000 perm   1475 sec   (1105 perm/sec)   p_kst 1.730061e-04   p_cons 9.879840e-01   p_joint 8.674847e-04

Joint ci ratio: 1.041278e-01	ci left: 8.184476e-04	ci right 9.089397e-04	k: 1415	n:1640000
Cons ci ratio: 3.376062e-04	ci left: 9.878144e-01	ci right 9.881485e-01	k: 1620291	n:1640000
KS ci ratio: 2.317742e-01	ci left: 1.541899e-04	ci right 1.951703e-04	k: 285	n:1640000
PRG4   1640000 perm   1490 sec   (1100 perm/sec)   p_kst 1.737805e-04   p_cons 9.879823e-01   p_joint 8.628049e-04

Joint ci ratio: 1.037256e-01	ci left: 8.199807e-04	ci right 9.102708e-04	k: 1426	n:1650000
Cons ci ratio: 3.367432e-04	ci left: 9.878034e-01	ci right 9.881367e-01	k: 1630152	n:1650000
KS ci ratio: 2.309680e-01	ci left: 1.543973e-04	ci right 1.952697e-04	k: 287	n:1650000
PRG4   1650000 perm   1506 sec   (1096 perm/sec)   p_kst 1.739394e-04   p_cons 9.879709e-01   p_joint 8.642424e-04

Joint ci ratio: 1.032562e-01	ci left: 8.226698e-04	ci right 9.128212e-04	k: 1439	n:1660000
Cons ci ratio: 3.358014e-04	ci left: 9.877986e-01	ci right 9.881310e-01	k: 1640023	n:1660000
KS ci ratio: 2.305681e-01	ci left: 1.540348e-04	ci right 1.947306e-04	k: 288	n:1660000
PRG4   1660000 perm   1521 sec   (1091 perm/sec)   p_kst 1.734940e-04   p_cons 9.879657e-01   p_joint 8.668675e-04

Joint ci ratio: 1.030062e-01	ci left: 8.218271e-04	ci right 9.116549e-04	k: 1446	n:1670000
Cons ci ratio: 3.347663e-04	ci left: 9.878012e-01	ci right 9.881325e-01	k: 1649906	n:1670000
KS ci ratio: 2.293805e-01	ci left: 1.548054e-04	ci right 1.954642e-04	k: 291	n:1670000
PRG4   1670000 perm   1537 sec   (1087 perm/sec)   p_kst 1.742515e-04   p_cons 9.879677e-01   p_joint 8.658683e-04

Joint ci ratio: 1.028288e-01	ci left: 8.198348e-04	ci right 9.092812e-04	k: 1451	n:1680000
Cons ci ratio: 3.336571e-04	ci left: 9.878096e-01	ci right 9.881399e-01	k: 1659799	n:1680000
KS ci ratio: 2.293806e-01	ci left: 1.538839e-04	ci right 1.943008e-04	k: 291	n:1680000
PRG4   1680000 perm   1552 sec   (1082 perm/sec)   p_kst 1.732143e-04   p_cons 9.879756e-01   p_joint 8.636905e-04

Joint ci ratio: 1.023714e-01	ci left: 8.224787e-04	ci right 9.117904e-04	k: 1464	n:1690000
Cons ci ratio: 3.327161e-04	ci left: 9.878067e-01	ci right 9.881360e-01	k: 1669673	n:1690000
KS ci ratio: 2.285991e-01	ci left: 1.540889e-04	ci right 1.944023e-04	k: 293	n:1690000
PRG4   1690000 perm   1568 sec   (1078 perm/sec)   p_kst 1.733728e-04   p_cons 9.879722e-01   p_joint 8.662722e-04

Joint ci ratio: 1.020238e-01	ci left: 8.233726e-04	ci right 9.124596e-04	k: 1474	n:1700000
Cons ci ratio: 3.317173e-04	ci left: 9.878085e-01	ci right 9.881368e-01	k: 1679555	n:1700000
KS ci ratio: 2.274415e-01	ci left: 1.548464e-04	ci right 1.951240e-04	k: 296	n:1700000
PRG4   1700000 perm   1584 sec   (1073 perm/sec)   p_kst 1.741176e-04   p_cons 9.879735e-01   p_joint 8.670588e-04

Joint ci ratio: 1.023370e-01	ci left: 8.134287e-04	ci right 9.017262e-04	k: 1465	n:1710000
Cons ci ratio: 3.307519e-04	ci left: 9.878086e-01	ci right 9.881359e-01	k: 1689434	n:1710000
KS ci ratio: 2.270596e-01	ci left: 1.544924e-04	ci right 1.946010e-04	k: 297	n:1710000
PRG4   1710000 perm   1599 sec   (1069 perm/sec)   p_kst 1.736842e-04   p_cons 9.879731e-01   p_joint 8.567251e-04

Joint ci ratio: 1.025827e-01	ci left: 8.047338e-04	ci right 8.923098e-04	k: 1458	n:1720000
Cons ci ratio: 3.298110e-04	ci left: 9.878075e-01	ci right 9.881339e-01	k: 1699311	n:1720000
KS ci ratio: 2.259252e-01	ci left: 1.552394e-04	ci right 1.953126e-04	k: 300	n:1720000
PRG4   1720000 perm   1615 sec   (1065 perm/sec)   p_kst 1.744186e-04   p_cons 9.879715e-01   p_joint 8.476744e-04

Joint ci ratio: 1.020939e-01	ci left: 8.079676e-04	ci right 8.954514e-04	k: 1472	n:1730000
Cons ci ratio: 3.287741e-04	ci left: 9.878139e-01	ci right 9.881393e-01	k: 1709201	n:1730000
KS ci ratio: 2.248076e-01	ci left: 1.559783e-04	ci right 1.960154e-04	k: 303	n:1730000
PRG4   1730000 perm   1631 sec   (1061 perm/sec)   p_kst 1.751445e-04   p_cons 9.879775e-01   p_joint 8.508671e-04

Joint ci ratio: 1.019556e-01	ci left: 8.055642e-04	ci right 8.926626e-04	k: 1476	n:1740000
Cons ci ratio: 3.277151e-04	ci left: 9.878226e-01	ci right 9.881470e-01	k: 1719095	n:1740000
KS ci ratio: 2.248077e-01	ci left: 1.550818e-04	ci right 1.948889e-04	k: 303	n:1740000
PRG4   1740000 perm   1647 sec   (1056 perm/sec)   p_kst 1.741379e-04   p_cons 9.879856e-01   p_joint 8.482759e-04

Joint ci ratio: 1.017149e-01	ci left: 8.048591e-04	ci right 8.916636e-04	k: 1483	n:1750000
Cons ci ratio: 3.266504e-04	ci left: 9.878324e-01	ci right 9.881557e-01	k: 1728991	n:1750000
KS ci ratio: 2.240718e-01	ci left: 1.552743e-04	ci right 1.949823e-04	k: 305	n:1750000
PRG4   1750000 perm   1663 sec   (1052 perm/sec)   p_kst 1.742857e-04   p_cons 9.879949e-01   p_joint 8.474286e-04

Joint ci ratio: 1.015441e-01	ci left: 8.030547e-04	ci right 8.895104e-04	k: 1488	n:1760000
Cons ci ratio: 3.256817e-04	ci left: 9.878358e-01	ci right 9.881581e-01	k: 1738876	n:1760000
KS ci ratio: 2.237066e-01	ci left: 1.549283e-04	ci right 1.944744e-04	k: 306	n:1760000
PRG4   1760000 perm   1680 sec   (1048 perm/sec)   p_kst 1.738636e-04   p_cons 9.879977e-01   p_joint 8.454545e-04

Joint ci ratio: 1.038015e-01	ci left: 7.632871e-04	ci right 8.473997e-04	k: 1424	n:1770000
Cons ci ratio: 3.247601e-04	ci left: 9.878362e-01	ci right 9.881576e-01	k: 1748756	n:1770000
KS ci ratio: 2.233432e-01	ci left: 1.545864e-04	ci right 1.939722e-04	k: 307	n:1770000
PRG4   1770000 perm   1696 sec   (1044 perm/sec)   p_kst 1.734463e-04   p_cons 9.879977e-01   p_joint 8.045198e-04

Joint ci ratio: 1.036562e-01	ci left: 7.611878e-04	ci right 8.449445e-04	k: 1428	n:1780000
Cons ci ratio: 3.240074e-04	ci left: 9.878248e-01	ci right 9.881455e-01	k: 1758615	n:1780000
KS ci ratio: 2.226216e-01	ci left: 1.547788e-04	ci right 1.940687e-04	k: 309	n:1780000
PRG4   1780000 perm   1712 sec   (1040 perm/sec)   p_kst 1.735955e-04   p_cons 9.879860e-01   p_joint 8.022472e-04

Joint ci ratio: 1.037291e-01	ci left: 7.558469e-04	ci right 8.390780e-04	k: 1426	n:1790000
Cons ci ratio: 3.230696e-04	ci left: 9.878276e-01	ci right 9.881473e-01	k: 1768499	n:1790000
KS ci ratio: 2.219069e-01	ci left: 1.549692e-04	ci right 1.941640e-04	k: 311	n:1790000
PRG4   1790000 perm   1729 sec   (1035 perm/sec)   p_kst 1.737430e-04   p_cons 9.879883e-01   p_joint 7.966480e-04

Joint ci ratio: 1.034035e-01	ci left: 7.565182e-04	ci right 8.395459e-04	k: 1435	n:1800000
Cons ci ratio: 3.222077e-04	ci left: 9.878253e-01	ci right 9.881442e-01	k: 1778374	n:1800000
KS ci ratio: 2.211990e-01	ci left: 1.551577e-04	ci right 1.942580e-04	k: 313	n:1800000
PRG4   1800000 perm   1745 sec   (1032 perm/sec)   p_kst 1.738889e-04   p_cons 9.879856e-01   p_joint 7.972222e-04

Joint ci ratio: 1.031525e-01	ci left: 7.561061e-04	ci right 8.388748e-04	k: 1442	n:1810000
Cons ci ratio: 3.212330e-04	ci left: 9.878320e-01	ci right 9.881499e-01	k: 1788265	n:1810000
KS ci ratio: 2.204979e-01	ci left: 1.553443e-04	ci right 1.943507e-04	k: 315	n:1810000
PRG4   1810000 perm   1761 sec   (1028 perm/sec)   p_kst 1.740331e-04   p_cons 9.879917e-01   p_joint 7.966851e-04

Joint ci ratio: 1.026555e-01	ci left: 7.594461e-04	ci right 8.421557e-04	k: 1456	n:1820000
Cons ci ratio: 3.204970e-04	ci left: 9.878214e-01	ci right 9.881386e-01	k: 1798125	n:1820000
KS ci ratio: 2.187737e-01	ci left: 1.570869e-04	ci right 1.961810e-04	k: 320	n:1820000
PRG4   1820000 perm   1778 sec   (1024 perm/sec)   p_kst 1.758242e-04   p_cons 9.879808e-01   p_joint 8.000000e-04

Joint ci ratio: 1.028679e-01	ci left: 7.521015e-04	ci right 8.341910e-04	k: 1450	n:1830000
Cons ci ratio: 3.197216e-04	ci left: 9.878142e-01	ci right 9.881307e-01	k: 1807991	n:1830000
KS ci ratio: 2.180953e-01	ci left: 1.572617e-04	ci right 1.962615e-04	k: 322	n:1830000
PRG4   1830000 perm   1795 sec   (1020 perm/sec)   p_kst 1.759563e-04   p_cons 9.879732e-01   p_joint 7.923497e-04

Joint ci ratio: 1.026207e-01	ci left: 7.517206e-04	ci right 8.335595e-04	k: 1457	n:1840000
Cons ci ratio: 3.187985e-04	ci left: 9.878187e-01	ci right 9.881342e-01	k: 1817878	n:1840000
KS ci ratio: 2.170894e-01	ci left: 1.579486e-04	ci right 1.969140e-04	k: 325	n:1840000
PRG4   1840000 perm   1812 sec   (1016 perm/sec)   p_kst 1.766304e-04   p_cons 9.879772e-01   p_joint 7.918478e-04

Joint ci ratio: 1.023054e-01	ci left: 7.523974e-04	ci right 8.340432e-04	k: 1466	n:1850000
Cons ci ratio: 3.179775e-04	ci left: 9.878159e-01	ci right 9.881306e-01	k: 1827752	n:1850000
KS ci ratio: 2.164265e-01	ci left: 1.581172e-04	ci right 1.969893e-04	k: 327	n:1850000
PRG4   1850000 perm   1829 sec   (1011 perm/sec)   p_kst 1.767568e-04   p_cons 9.879741e-01   p_joint 7.924324e-04

Joint ci ratio: 1.022708e-01	ci left: 7.488761e-04	ci right 8.301106e-04	k: 1467	n:1860000
Cons ci ratio: 3.173276e-04	ci left: 9.878008e-01	ci right 9.881149e-01	k: 1837603	n:1860000
KS ci ratio: 2.160974e-01	ci left: 1.577756e-04	ci right 1.964969e-04	k: 328	n:1860000
PRG4   1860000 perm   1846 sec   (1007 perm/sec)   p_kst 1.763441e-04   p_cons 9.879586e-01   p_joint 7.887097e-04

Joint ci ratio: 1.020278e-01	ci left: 7.485191e-04	ci right 8.295104e-04	k: 1474	n:1870000
Cons ci ratio: 3.164608e-04	ci left: 9.878025e-01	ci right 9.881157e-01	k: 1847485	n:1870000
KS ci ratio: 2.154436e-01	ci left: 1.579436e-04	ci right 1.965734e-04	k: 330	n:1870000
PRG4   1870000 perm   1864 sec   (1003 perm/sec)   p_kst 1.764706e-04   p_cons 9.879599e-01   p_joint 7.882353e-04

Joint ci ratio: 1.017522e-01	ci left: 7.486845e-04	ci right 8.294618e-04	k: 1482	n:1880000
Cons ci ratio: 3.155446e-04	ci left: 9.878085e-01	ci right 9.881208e-01	k: 1857375	n:1880000
KS ci ratio: 2.144737e-01	ci left: 1.586133e-04	ci right 1.972093e-04	k: 333	n:1880000
PRG4   1880000 perm   1881 sec   (1000 perm/sec)   p_kst 1.771277e-04   p_cons 9.879654e-01   p_joint 7.882979e-04

Joint ci ratio: 1.021322e-01	ci left: 7.390513e-04	ci right 8.191049e-04	k: 1471	n:1890000
Cons ci ratio: 3.146082e-04	ci left: 9.878166e-01	ci right 9.881279e-01	k: 1867269	n:1890000
KS ci ratio: 2.141534e-01	ci left: 1.582748e-04	ci right 1.967233e-04	k: 334	n:1890000
PRG4   1890000 perm   1898 sec   (996 perm/sec)   p_kst 1.767196e-04   p_cons 9.879730e-01   p_joint 7.783069e-04

Joint ci ratio: 1.018903e-01	ci left: 7.387518e-04	ci right 8.185720e-04	k: 1478	n:1900000
Cons ci ratio: 3.137426e-04	ci left: 9.878198e-01	ci right 9.881303e-01	k: 1877154	n:1900000
KS ci ratio: 2.135170e-01	ci left: 1.584380e-04	ci right 1.967968e-04	k: 336	n:1900000
PRG4   1900000 perm   1915 sec   (992 perm/sec)   p_kst 1.768421e-04   p_cons 9.879758e-01   p_joint 7.778947e-04

Joint ci ratio: 1.016500e-01	ci left: 7.384556e-04	ci right 8.180445e-04	k: 1485	n:1910000
Cons ci ratio: 3.129874e-04	ci left: 9.878151e-01	ci right 9.881248e-01	k: 1887024	n:1910000
KS ci ratio: 2.128862e-01	ci left: 1.585997e-04	ci right 1.968694e-04	k: 338	n:1910000
PRG4   1910000 perm   1933 sec   (988 perm/sec)   p_kst 1.769634e-04   p_cons 9.879707e-01   p_joint 7.774869e-04

Joint ci ratio: 1.013097e-01	ci left: 7.396856e-04	ci right 8.191243e-04	k: 1495	n:1920000
Cons ci ratio: 3.121214e-04	ci left: 9.878193e-01	ci right 9.881282e-01	k: 1896911	n:1920000
KS ci ratio: 2.125730e-01	ci left: 1.582668e-04	ci right 1.963926e-04	k: 339	n:1920000
PRG4   1920000 perm   1951 sec   (984 perm/sec)   p_kst 1.765625e-04   p_cons 9.879745e-01   p_joint 7.786458e-04

Joint ci ratio: 1.010735e-01	ci left: 7.393882e-04	ci right 8.185988e-04	k: 1502	n:1930000
Cons ci ratio: 3.113031e-04	ci left: 9.878204e-01	ci right 9.881284e-01	k: 1906792	n:1930000
KS ci ratio: 2.122611e-01	ci left: 1.579373e-04	ci right 1.959207e-04	k: 340	n:1930000
PRG4   1930000 perm   1968 sec   (981 perm/sec)   p_kst 1.761658e-04   p_cons 9.879751e-01   p_joint 7.782383e-04

Joint ci ratio: 1.008056e-01	ci left: 7.395965e-04	ci right 8.186070e-04	k: 1510	n:1940000
Cons ci ratio: 3.104913e-04	ci left: 9.878214e-01	ci right 9.881287e-01	k: 1916673	n:1940000
KS ci ratio: 2.113334e-01	ci left: 1.585876e-04	ci right 1.965391e-04	k: 343	n:1940000
PRG4   1940000 perm   1986 sec   (977 perm/sec)   p_kst 1.768041e-04   p_cons 9.879758e-01   p_joint 7.783505e-04

Joint ci ratio: 1.013781e-01	ci left: 7.273060e-04	ci right 8.054710e-04	k: 1493	n:1950000
Cons ci ratio: 3.096725e-04	ci left: 9.878235e-01	ci right 9.881299e-01	k: 1926556	n:1950000
KS ci ratio: 2.104178e-01	ci left: 1.592315e-04	ci right 1.971508e-04	k: 346	n:1950000
PRG4   1950000 perm   2004 sec   (973 perm/sec)   p_kst 1.774359e-04   p_cons 9.879774e-01   p_joint 7.656410e-04

Joint ci ratio: 1.036964e-01	ci left: 6.907845e-04	ci right 7.668256e-04	k: 1427	n:1960000
Cons ci ratio: 3.088733e-04	ci left: 9.878245e-01	ci right 9.881302e-01	k: 1936437	n:1960000
KS ci ratio: 2.098141e-01	ci left: 1.593859e-04	ci right 1.972189e-04	k: 348	n:1960000
PRG4   1960000 perm   2022 sec   (970 perm/sec)   p_kst 1.775510e-04   p_cons 9.879781e-01   p_joint 7.280612e-04

Joint ci ratio: 1.034071e-01	ci left: 6.912337e-04	ci right 7.670992e-04	k: 1435	n:1970000
Cons ci ratio: 3.079355e-04	ci left: 9.878368e-01	ci right 9.881415e-01	k: 1946340	n:1970000
KS ci ratio: 2.095141e-01	ci left: 1.590577e-04	ci right 1.967521e-04	k: 349	n:1970000
PRG4   1970000 perm   2039 sec   (966 perm/sec)   p_kst 1.771574e-04   p_cons 9.879898e-01   p_joint 7.284264e-04

Joint ci ratio: 1.035517e-01	ci left: 6.857746e-04	ci right 7.611526e-04	k: 1431	n:1980000
Cons ci ratio: 3.072215e-04	ci left: 9.878321e-01	ci right 9.881361e-01	k: 1956210	n:1980000
KS ci ratio: 2.095142e-01	ci left: 1.582544e-04	ci right 1.957584e-04	k: 349	n:1980000
PRG4   1980000 perm   2057 sec   (962 perm/sec)   p_kst 1.762626e-04   p_cons 9.879848e-01   p_joint 7.227273e-04

Joint ci ratio: 1.033715e-01	ci left: 6.847761e-04	ci right 7.599053e-04	k: 1436	n:1990000
Cons ci ratio: 3.064541e-04	ci left: 9.878321e-01	ci right 9.881353e-01	k: 1966089	n:1990000
KS ci ratio: 2.092156e-01	ci left: 1.579353e-04	ci right 1.953035e-04	k: 350	n:1990000
PRG4   1990000 perm   2075 sec   (959 perm/sec)   p_kst 1.758794e-04   p_cons 9.879844e-01   p_joint 7.216080e-04

Joint ci ratio: 1.030849e-01	ci left: 6.852489e-04	ci right 7.602090e-04	k: 1444	n:2000000
Cons ci ratio: 3.056989e-04	ci left: 9.878315e-01	ci right 9.881341e-01	k: 1975967	n:2000000
KS ci ratio: 2.089183e-01	ci left: 1.576195e-04	ci right 1.948531e-04	k: 351	n:2000000
PRG4   2000000 perm   2093 sec   (955 perm/sec)   p_kst 1.755000e-04   p_cons 9.879835e-01   p_joint 7.220000e-04

Joint ci ratio: 1.027300e-01	ci left: 6.866868e-04	ci right 7.615299e-04	k: 1454	n:2010000
Cons ci ratio: 3.048980e-04	ci left: 9.878350e-01	ci right 9.881367e-01	k: 1985853	n:2010000
KS ci ratio: 2.083272e-01	ci left: 1.577783e-04	ci right 1.949306e-04	k: 353	n:2010000
PRG4   2010000 perm   2112 sec   (952 perm/sec)   p_kst 1.756219e-04   p_cons 9.879866e-01   p_joint 7.233831e-04

Joint ci ratio: 1.025189e-01	ci left: 6.861814e-04	ci right 7.608065e-04	k: 1460	n:2020000
Cons ci ratio: 3.041035e-04	ci left: 9.878384e-01	ci right 9.881394e-01	k: 1995739	n:2020000
KS ci ratio: 2.080337e-01	ci left: 1.574665e-04	ci right 1.944864e-04	k: 354	n:2020000
PRG4   2020000 perm   2130 sec   (948 perm/sec)   p_kst 1.752475e-04   p_cons 9.879896e-01   p_joint 7.227723e-04

Joint ci ratio: 1.023439e-01	ci left: 6.852012e-04	ci right 7.595848e-04	k: 1465	n:2030000
Cons ci ratio: 3.034787e-04	ci left: 9.878289e-01	ci right 9.881293e-01	k: 2005599	n:2030000
KS ci ratio: 2.074501e-01	ci left: 1.576248e-04	ci right 1.945648e-04	k: 356	n:2030000
PRG4   2030000 perm   2148 sec   (945 perm/sec)   p_kst 1.753695e-04   p_cons 9.879798e-01   p_joint 7.216749e-04

Joint ci ratio: 1.020658e-01	ci left: 6.856637e-04	ci right 7.598831e-04	k: 1473	n:2040000
Cons ci ratio: 3.027202e-04	ci left: 9.878304e-01	ci right 9.881300e-01	k: 2015481	n:2040000
KS ci ratio: 2.071602e-01	ci left: 1.573169e-04	ci right 1.941266e-04	k: 357	n:2040000
PRG4   2040000 perm   2166 sec   (942 perm/sec)   p_kst 1.750000e-04   p_cons 9.879809e-01   p_joint 7.220588e-04

Joint ci ratio: 1.016527e-01	ci left: 6.880236e-04	ci right 7.621791e-04	k: 1485	n:2050000
Cons ci ratio: 3.019674e-04	ci left: 9.878319e-01	ci right 9.881307e-01	k: 2025363	n:2050000
KS ci ratio: 2.054455e-01	ci left: 1.593251e-04	ci right 1.962575e-04	k: 363	n:2050000
PRG4   2050000 perm   2185 sec   (938 perm/sec)   p_kst 1.770732e-04   p_cons 9.879820e-01   p_joint 7.243902e-04

Joint ci ratio: 1.025196e-01	ci left: 6.728573e-04	ci right 7.460338e-04	k: 1460	n:2060000
Cons ci ratio: 3.012139e-04	ci left: 9.878338e-01	ci right 9.881318e-01	k: 2035246	n:2060000
KS ci ratio: 2.051639e-01	ci left: 1.590122e-04	ci right 1.958151e-04	k: 364	n:2060000
PRG4   2060000 perm   2203 sec   (935 perm/sec)   p_kst 1.766990e-04   p_cons 9.879835e-01   p_joint 7.087379e-04

Joint ci ratio: 1.022749e-01	ci left: 6.729018e-04	ci right 7.458980e-04	k: 1467	n:2070000
Cons ci ratio: 3.005089e-04	ci left: 9.878323e-01	ci right 9.881296e-01	k: 2045122	n:2070000
KS ci ratio: 2.048835e-01	ci left: 1.587023e-04	ci right 1.953770e-04	k: 365	n:2070000
PRG4   2070000 perm   2222 sec   (932 perm/sec)   p_kst 1.763285e-04   p_cons 9.879816e-01   p_joint 7.086957e-04

Joint ci ratio: 1.021012e-01	ci left: 6.720091e-04	ci right 7.447773e-04	k: 1472	n:2080000
Cons ci ratio: 2.997420e-04	ci left: 9.878361e-01	ci right 9.881327e-01	k: 2055009	n:2080000
KS ci ratio: 2.048836e-01	ci left: 1.579393e-04	ci right 1.944377e-04	k: 365	n:2080000
PRG4   2080000 perm   2241 sec   (928 perm/sec)   p_kst 1.754808e-04   p_cons 9.879851e-01   p_joint 7.076923e-04

Joint ci ratio: 1.018594e-01	ci left: 6.720576e-04	ci right 7.446484e-04	k: 1479	n:2090000
Cons ci ratio: 2.989810e-04	ci left: 9.878399e-01	ci right 9.881358e-01	k: 2064896	n:2090000
KS ci ratio: 2.043261e-01	ci left: 1.580915e-04	ci right 1.945133e-04	k: 367	n:2090000
PRG4   2090000 perm   2260 sec   (925 perm/sec)   p_kst 1.755981e-04   p_cons 9.879885e-01   p_joint 7.076555e-04

Joint ci ratio: 1.029442e-01	ci left: 6.544732e-04	ci right 7.259630e-04	k: 1448	n:2100000
Cons ci ratio: 2.982915e-04	ci left: 9.878384e-01	ci right 9.881336e-01	k: 2074772	n:2100000
KS ci ratio: 2.043262e-01	ci left: 1.573387e-04	ci right 1.935871e-04	k: 367	n:2100000
PRG4   2100000 perm   2280 sec   (921 perm/sec)   p_kst 1.747619e-04   p_cons 9.879867e-01   p_joint 6.895238e-04

Joint ci ratio: 1.026259e-01	ci left: 6.555272e-04	ci right 7.268974e-04	k: 1457	n:2110000
Cons ci ratio: 2.977374e-04	ci left: 9.878264e-01	ci right 9.881210e-01	k: 2084626	n:2110000
KS ci ratio: 2.037732e-01	ci left: 1.574924e-04	ci right 1.936658e-04	k: 369	n:2110000
PRG4   2110000 perm   2299 sec   (918 perm/sec)   p_kst 1.748815e-04   p_cons 9.879744e-01   p_joint 6.905213e-04

Joint ci ratio: 1.024154e-01	ci left: 6.551927e-04	ci right 7.263714e-04	k: 1463	n:2120000
Cons ci ratio: 2.969915e-04	ci left: 9.878302e-01	ci right 9.881241e-01	k: 2094513	n:2120000
KS ci ratio: 2.037733e-01	ci left: 1.567495e-04	ci right 1.927523e-04	k: 369	n:2120000
PRG4   2120000 perm   2318 sec   (915 perm/sec)   p_kst 1.740566e-04   p_cons 9.879778e-01   p_joint 6.900943e-04

Joint ci ratio: 1.022062e-01	ci left: 6.548615e-04	ci right 7.258501e-04	k: 1469	n:2130000
Cons ci ratio: 2.963508e-04	ci left: 9.878260e-01	ci right 9.881192e-01	k: 2104383	n:2130000
KS ci ratio: 2.034985e-01	ci left: 1.564592e-04	ci right 1.923408e-04	k: 370	n:2130000
PRG4   2130000 perm   2338 sec   (911 perm/sec)   p_kst 1.737089e-04   p_cons 9.879732e-01   p_joint 6.896714e-04

Joint ci ratio: 1.020675e-01	ci left: 6.536228e-04	ci right 7.243752e-04	k: 1473	n:2140000
Cons ci ratio: 2.957257e-04	ci left: 9.878208e-01	ci right 9.881134e-01	k: 2114251	n:2140000
KS ci ratio: 2.032248e-01	ci left: 1.561715e-04	ci right 1.919330e-04	k: 371	n:2140000
PRG4   2140000 perm   2357 sec   (908 perm/sec)   p_kst 1.733645e-04   p_cons 9.879678e-01   p_joint 6.883178e-04

Joint ci ratio: 1.018260e-01	ci left: 6.537555e-04	ci right 7.243448e-04	k: 1480	n:2150000
Cons ci ratio: 2.949834e-04	ci left: 9.878255e-01	ci right 9.881174e-01	k: 2124140	n:2150000
KS ci ratio: 2.026807e-01	ci left: 1.563281e-04	ci right 1.920177e-04	k: 373	n:2150000
PRG4   2150000 perm   2377 sec   (905 perm/sec)   p_kst 1.734884e-04   p_cons 9.879721e-01   p_joint 6.883721e-04

Joint ci ratio: 1.015521e-01	ci left: 6.543383e-04	ci right 7.247892e-04	k: 1488	n:2160000
Cons ci ratio: 2.943325e-04	ci left: 9.878232e-01	ci right 9.881144e-01	k: 2134014	n:2160000
KS ci ratio: 2.024103e-01	ci left: 1.560439e-04	ci right 1.916152e-04	k: 374	n:2160000
PRG4   2160000 perm   2396 sec   (901 perm/sec)   p_kst 1.731481e-04   p_cons 9.879694e-01   p_joint 6.888889e-04

Joint ci ratio: 1.018264e-01	ci left: 6.477300e-04	ci right 7.176690e-04	k: 1480	n:2170000
Cons ci ratio: 2.936518e-04	ci left: 9.878236e-01	ci right 9.881142e-01	k: 2143894	n:2170000
KS ci ratio: 2.018727e-01	ci left: 1.561998e-04	ci right 1.917004e-04	k: 376	n:2170000
PRG4   2170000 perm   2416 sec   (898 perm/sec)   p_kst 1.732719e-04   p_cons 9.879696e-01   p_joint 6.820276e-04

Joint ci ratio: 1.016892e-01	ci left: 6.465469e-04	ci right 7.162585e-04	k: 1484	n:2180000
Cons ci ratio: 2.928796e-04	ci left: 9.878320e-01	ci right 9.881218e-01	k: 2153791	n:2180000
KS ci ratio: 2.016055e-01	ci left: 1.559188e-04	ci right 1.913029e-04	k: 377	n:2180000
PRG4   2180000 perm   2436 sec   (895 perm/sec)   p_kst 1.729358e-04   p_cons 9.879775e-01   p_joint 6.807339e-04

Joint ci ratio: 1.013824e-01	ci left: 6.475999e-04	ci right 7.172018e-04	k: 1493	n:2190000
Cons ci ratio: 2.922145e-04	ci left: 9.878319e-01	ci right 9.881211e-01	k: 2163670	n:2190000
KS ci ratio: 2.008102e-01	ci left: 1.565077e-04	ci right 1.918682e-04	k: 380	n:2190000
PRG4   2190000 perm   2455 sec   (892 perm/sec)   p_kst 1.735160e-04   p_cons 9.879772e-01   p_joint 6.817352e-04

Joint ci ratio: 1.011457e-01	ci left: 6.477575e-04	ci right 7.172041e-04	k: 1500	n:2200000
Cons ci ratio: 2.915818e-04	ci left: 9.878296e-01	ci right 9.881182e-01	k: 2173544	n:2200000
KS ci ratio: 2.000242e-01	ci left: 1.570915e-04	ci right 1.924280e-04	k: 383	n:2200000
PRG4   2200000 perm   2475 sec   (889 perm/sec)   p_kst 1.740909e-04   p_cons 9.879745e-01   p_joint 6.818182e-04

Joint ci ratio: 1.007770e-01	ci left: 6.496782e-04	ci right 7.190619e-04	k: 1511	n:2210000
Cons ci ratio: 2.909144e-04	ci left: 9.878305e-01	ci right 9.881184e-01	k: 2183425	n:2210000
KS ci ratio: 2.000242e-01	ci left: 1.563807e-04	ci right 1.915573e-04	k: 383	n:2210000
PRG4   2210000 perm   2494 sec   (886 perm/sec)   p_kst 1.733032e-04   p_cons 9.879751e-01   p_joint 6.837104e-04

Joint ci ratio: 1.005445e-01	ci left: 6.498255e-04	ci right 7.190553e-04	k: 1518	n:2220000
Cons ci ratio: 2.902681e-04	ci left: 9.878301e-01	ci right 9.881173e-01	k: 2193303	n:2220000
KS ci ratio: 1.992474e-01	ci left: 1.569601e-04	ci right 1.921132e-04	k: 386	n:2220000
PRG4   2220000 perm   2514 sec   (883 perm/sec)   p_kst 1.738739e-04   p_cons 9.879743e-01   p_joint 6.837838e-04

Joint ci ratio: 1.003137e-01	ci left: 6.499716e-04	ci right 7.190487e-04	k: 1525	n:2230000
Cons ci ratio: 2.896315e-04	ci left: 9.878292e-01	ci right 9.881158e-01	k: 2203180	n:2230000
KS ci ratio: 1.982255e-01	ci left: 1.579607e-04	ci right 1.931346e-04	k: 390	n:2230000
PRG4   2230000 perm   2534 sec   (880 perm/sec)   p_kst 1.748879e-04   p_cons 9.879731e-01   p_joint 6.838565e-04

Joint ci ratio: 1.002153e-01	ci left: 6.483756e-04	ci right 7.172116e-04	k: 1528	n:2240000
Cons ci ratio: 2.888959e-04	ci left: 9.878368e-01	ci right 9.881227e-01	k: 2213076	n:2240000
KS ci ratio: 1.979725e-01	ci left: 1.576798e-04	ci right 1.927409e-04	k: 391	n:2240000
PRG4   2240000 perm   2554 sec   (877 perm/sec)   p_kst 1.745536e-04   p_cons 9.879804e-01   p_joint 6.821429e-04

Joint ci ratio: 1.000192e-01	ci left: 6.480939e-04	ci right 7.167574e-04	k: 1534	n:2250000
Cons ci ratio: 2.881982e-04	ci left: 9.878417e-01	ci right 9.881268e-01	k: 2222966	n:2250000
KS ci ratio: 1.977205e-01	ci left: 1.574014e-04	ci right 1.923507e-04	k: 392	n:2250000
PRG4   2250000 perm   2574 sec   (874 perm/sec)   p_kst 1.742222e-04   p_cons 9.879849e-01   p_joint 6.817778e-04

Joint ci ratio: 1.006114e-01	ci left: 6.374612e-04	ci right 7.054217e-04	k: 1516	n:2260000
Cons ci ratio: 2.875644e-04	ci left: 9.878416e-01	ci right 9.881262e-01	k: 2232845	n:2260000
KS ci ratio: 1.964745e-01	ci left: 1.588082e-04	ci right 1.938210e-04	k: 397	n:2260000
PRG4   2260000 perm   2594 sec   (871 perm/sec)   p_kst 1.756637e-04   p_cons 9.879845e-01   p_joint 6.707965e-04

Joint ci ratio: 1.002157e-01	ci left: 6.398067e-04	ci right 7.077332e-04	k: 1528	n:2270000
Cons ci ratio: 2.869294e-04	ci left: 9.878420e-01	ci right 9.881259e-01	k: 2242725	n:2270000
KS ci ratio: 1.959827e-01	ci left: 1.589464e-04	ci right 1.938915e-04	k: 399	n:2270000
PRG4   2270000 perm   2614 sec   (868 perm/sec)   p_kst 1.757709e-04   p_cons 9.879846e-01   p_joint 6.731278e-04

Joint ci ratio: 1.002487e-01	ci left: 6.365728e-04	ci right 7.041795e-04	k: 1527	n:2280000
Cons ci ratio: 2.863092e-04	ci left: 9.878415e-01	ci right 9.881248e-01	k: 2252603	n:2280000
KS ci ratio: 1.957382e-01	ci left: 1.586663e-04	ci right 1.935012e-04	k: 400	n:2280000
PRG4   2280000 perm   2635 sec   (865 perm/sec)   p_kst 1.754386e-04   p_cons 9.879838e-01   p_joint 6.697368e-04

Joint ci ratio: 1.002160e-01	ci left: 6.342187e-04	ci right 7.015522e-04	k: 1528	n:2290000
Cons ci ratio: 2.856878e-04	ci left: 9.878414e-01	ci right 9.881241e-01	k: 2262482	n:2290000
KS ci ratio: 1.942899e-01	ci left: 1.604657e-04	ci right 1.954040e-04	k: 406	n:2290000
PRG4   2290000 perm   2656 sec   (862 perm/sec)   p_kst 1.772926e-04   p_cons 9.879834e-01   p_joint 6.672489e-04

Joint ci ratio: 1.001507e-01	ci left: 6.323090e-04	ci right 6.993933e-04	k: 1530	n:2300000
Cons ci ratio: 2.850078e-04	ci left: 9.878466e-01	ci right 9.881287e-01	k: 2272373	n:2300000
KS ci ratio: 1.938142e-01	ci left: 1.605953e-04	ci right 1.954662e-04	k: 408	n:2300000
PRG4   2300000 perm   2676 sec   (859 perm/sec)   p_kst 1.773913e-04   p_cons 9.879883e-01   p_joint 6.652174e-04

Joint ci ratio: 1.003807e-01	ci left: 6.266173e-04	ci right 6.932595e-04	k: 1523	n:2310000
Cons ci ratio: 2.843533e-04	ci left: 9.878500e-01	ci right 9.881314e-01	k: 2282260	n:2310000
KS ci ratio: 1.935778e-01	ci left: 1.603120e-04	ci right 1.950739e-04	k: 409	n:2310000
PRG4   2310000 perm   2697 sec   (857 perm/sec)   p_kst 1.770563e-04   p_cons 9.879913e-01   p_joint 6.593074e-04

Joint ci ratio: 1.017942e-01	ci left: 6.062703e-04	ci right 6.717107e-04	k: 1481	n:2320000
Cons ci ratio: 2.837651e-04	ci left: 9.878482e-01	ci right 9.881290e-01	k: 2292135	n:2320000
KS ci ratio: 1.931073e-01	ci left: 1.604413e-04	ci right 1.951368e-04	k: 411	n:2320000
PRG4   2320000 perm   2718 sec   (854 perm/sec)   p_kst 1.771552e-04   p_cons 9.879892e-01   p_joint 6.383621e-04

Joint ci ratio: 9.122540e-02	ci left: 7.557158e-04	ci right 8.283668e-04	k: 1844	n:2330000
Cons ci ratio: 2.832163e-04	ci left: 9.878434e-01	ci right 9.881236e-01	k: 2302003	n:2330000
KS ci ratio: 1.926403e-01	ci left: 1.605697e-04	ci right 1.951991e-04	k: 413	n:2330000
PRG4   2330000 perm   2739 sec   (851 perm/sec)   p_kst 1.772532e-04   p_cons 9.879841e-01   p_joint 7.914163e-04

Joint ci ratio: 9.110210e-02	ci left: 7.545742e-04	ci right 8.270123e-04	k: 1849	n:2340000
Cons ci ratio: 2.825385e-04	ci left: 9.878498e-01	ci right 9.881293e-01	k: 2311897	n:2340000
KS ci ratio: 1.919461e-01	ci left: 1.611038e-04	ci right 1.957086e-04	k: 416	n:2340000
PRG4   2340000 perm   2759 sec   (848 perm/sec)   p_kst 1.777778e-04   p_cons 9.879902e-01   p_joint 7.901709e-04

Joint ci ratio: 9.085683e-02	ci left: 7.555218e-04	ci right 8.278451e-04	k: 1859	n:2350000
Cons ci ratio: 2.819412e-04	ci left: 9.878497e-01	ci right 9.881287e-01	k: 2321776	n:2350000
KS ci ratio: 1.908054e-01	ci left: 1.624440e-04	ci right 1.971052e-04	k: 421	n:2350000
PRG4   2350000 perm   2780 sec   (845 perm/sec)   p_kst 1.791489e-04   p_cons 9.879898e-01   p_joint 7.910638e-04

Joint ci ratio: 9.054087e-02	ci left: 7.577040e-04	ci right 8.299707e-04	k: 1872	n:2360000
Cons ci ratio: 2.813980e-04	ci left: 9.878454e-01	ci right 9.881238e-01	k: 2331645	n:2360000
KS ci ratio: 1.901308e-01	ci left: 1.629662e-04	ci right 1.976018e-04	k: 424	n:2360000
PRG4   2360000 perm   2801 sec   (842 perm/sec)   p_kst 1.796610e-04   p_cons 9.879852e-01   p_joint 7.932203e-04

Joint ci ratio: 9.032410e-02	ci left: 7.582185e-04	ci right 8.303520e-04	k: 1881	n:2370000
Cons ci ratio: 2.808279e-04	ci left: 9.878436e-01	ci right 9.881215e-01	k: 2341520	n:2370000
KS ci ratio: 1.896850e-01	ci left: 1.630824e-04	ci right 1.976520e-04	k: 426	n:2370000
PRG4   2370000 perm   2822 sec   (840 perm/sec)   p_kst 1.797468e-04   p_cons 9.879831e-01   p_joint 7.936709e-04

Joint ci ratio: 9.013274e-02	ci left: 7.583183e-04	ci right 8.303003e-04	k: 1889	n:2380000
Cons ci ratio: 2.802067e-04	ci left: 9.878465e-01	ci right 9.881237e-01	k: 2351406	n:2380000
KS ci ratio: 1.892423e-01	ci left: 1.631976e-04	ci right 1.977016e-04	k: 428	n:2380000
PRG4   2380000 perm   2844 sec   (837 perm/sec)   p_kst 1.798319e-04   p_cons 9.879857e-01   p_joint 7.936975e-04

Joint ci ratio: 8.994258e-02	ci left: 7.584173e-04	ci right 8.302489e-04	k: 1897	n:2390000
Cons ci ratio: 2.795748e-04	ci left: 9.878506e-01	ci right 9.881273e-01	k: 2361295	n:2390000
KS ci ratio: 1.890221e-01	ci left: 1.629134e-04	ci right 1.973126e-04	k: 429	n:2390000
PRG4   2390000 perm   2865 sec   (834 perm/sec)   p_kst 1.794979e-04   p_cons 9.879895e-01   p_joint 7.937238e-04

Joint ci ratio: 8.973007e-02	ci left: 7.589230e-04	ci right 8.306237e-04	k: 1906	n:2400000
Cons ci ratio: 2.790059e-04	ci left: 9.878497e-01	ci right 9.881258e-01	k: 2371172	n:2400000
KS ci ratio: 1.883661e-01	ci left: 1.634256e-04	ci right 1.977995e-04	k: 432	n:2400000
PRG4   2400000 perm   2886 sec   (832 perm/sec)   p_kst 1.800000e-04   p_cons 9.879883e-01   p_joint 7.941667e-04

Joint ci ratio: 8.954245e-02	ci left: 7.590190e-04	ci right 8.305710e-04	k: 1914	n:2410000
Cons ci ratio: 2.783674e-04	ci left: 9.878551e-01	ci right 9.881305e-01	k: 2381064	n:2410000
KS ci ratio: 1.881490e-01	ci left: 1.631428e-04	ci right 1.974132e-04	k: 433	n:2410000
PRG4   2410000 perm   2908 sec   (829 perm/sec)   p_kst 1.796680e-04   p_cons 9.879934e-01   p_joint 7.941909e-04

Joint ci ratio: 8.926314e-02	ci left: 7.607304e-04	ci right 8.322084e-04	k: 1926	n:2420000
Cons ci ratio: 2.777430e-04	ci left: 9.878595e-01	ci right 9.881343e-01	k: 2390954	n:2420000
KS ci ratio: 1.870744e-01	ci left: 1.644378e-04	ci right 1.987605e-04	k: 438	n:2420000
PRG4   2420000 perm   2929 sec   (826 perm/sec)   p_kst 1.809917e-04   p_cons 9.879975e-01   p_joint 7.958678e-04

Joint ci ratio: 8.910147e-02	ci left: 7.604162e-04	ci right 8.317286e-04	k: 1933	n:2430000
Cons ci ratio: 2.771611e-04	ci left: 9.878607e-01	ci right 9.881349e-01	k: 2400836	n:2430000
KS ci ratio: 1.866497e-01	ci left: 1.645456e-04	ci right 1.988040e-04	k: 440	n:2430000
PRG4   2430000 perm   2951 sec   (823 perm/sec)   p_kst 1.810700e-04   p_cons 9.879984e-01   p_joint 7.954733e-04

Joint ci ratio: 8.891775e-02	ci left: 7.605055e-04	ci right 8.316715e-04	k: 1941	n:2440000
Cons ci ratio: 2.766355e-04	ci left: 9.878572e-01	ci right 9.881310e-01	k: 2410707	n:2440000
KS ci ratio: 1.862279e-01	ci left: 1.646527e-04	ci right 1.988471e-04	k: 442	n:2440000
PRG4   2440000 perm   2973 sec   (821 perm/sec)   p_kst 1.811475e-04   p_cons 9.879947e-01   p_joint 7.954918e-04

Joint ci ratio: 8.871241e-02	ci left: 7.609933e-04	ci right 8.320319e-04	k: 1950	n:2450000
Cons ci ratio: 2.761366e-04	ci left: 9.878518e-01	ci right 9.881250e-01	k: 2420573	n:2450000
KS ci ratio: 1.860181e-01	ci left: 1.643698e-04	ci right 1.984627e-04	k: 443	n:2450000
PRG4   2450000 perm   2995 sec   (818 perm/sec)   p_kst 1.808163e-04   p_cons 9.879890e-01   p_joint 7.959184e-04

Joint ci ratio: 8.919426e-02	ci left: 7.495529e-04	ci right 8.199235e-04	k: 1929	n:2460000
Cons ci ratio: 2.755601e-04	ci left: 9.878533e-01	ci right 9.881260e-01	k: 2430456	n:2460000
KS ci ratio: 1.858090e-01	ci left: 1.640892e-04	ci right 1.980813e-04	k: 444	n:2460000
PRG4   2460000 perm   3017 sec   (815 perm/sec)   p_kst 1.804878e-04   p_cons 9.879902e-01   p_joint 7.841463e-04

Joint ci ratio: 8.905597e-02	ci left: 7.488933e-04	ci right 8.190872e-04	k: 1935	n:2470000
Cons ci ratio: 2.749965e-04	ci left: 9.878541e-01	ci right 9.881262e-01	k: 2440337	n:2470000
KS ci ratio: 1.853928e-01	ci left: 1.641969e-04	ci right 1.981267e-04	k: 446	n:2470000
PRG4   2470000 perm   3039 sec   (813 perm/sec)   p_kst 1.805668e-04   p_cons 9.879907e-01   p_joint 7.834008e-04

Joint ci ratio: 8.884967e-02	ci left: 7.494219e-04	ci right 8.194942e-04	k: 1944	n:2480000
Cons ci ratio: 2.743898e-04	ci left: 9.878588e-01	ci right 9.881303e-01	k: 2450228	n:2480000
KS ci ratio: 1.847738e-01	ci left: 1.646885e-04	ci right 1.985934e-04	k: 449	n:2480000
PRG4   2480000 perm   3062 sec   (810 perm/sec)   p_kst 1.810484e-04   p_cons 9.879952e-01   p_joint 7.838710e-04

Joint ci ratio: 8.869023e-02	ci left: 7.491610e-04	ci right 8.190767e-04	k: 1951	n:2490000
Cons ci ratio: 2.739029e-04	ci left: 9.878535e-01	ci right 9.881245e-01	k: 2460094	n:2490000
KS ci ratio: 1.845688e-01	ci left: 1.644101e-04	ci right 1.982160e-04	k: 450	n:2490000
PRG4   2490000 perm   3084 sec   (807 perm/sec)   p_kst 1.807229e-04   p_cons 9.879896e-01   p_joint 7.835341e-04

Joint ci ratio: 8.846388e-02	ci left: 7.500758e-04	ci right 8.198890e-04	k: 1961	n:2500000
Cons ci ratio: 2.733356e-04	ci left: 9.878554e-01	ci right 9.881259e-01	k: 2469978	n:2500000
KS ci ratio: 1.841609e-01	ci left: 1.645156e-04	ci right 1.982600e-04	k: 452	n:2500000
PRG4   2500000 perm   3106 sec   (805 perm/sec)   p_kst 1.808000e-04   p_cons 9.879912e-01   p_joint 7.844000e-04

Joint ci ratio: 8.875879e-02	ci left: 7.420228e-04	ci right 8.113286e-04	k: 1948	n:2510000
Cons ci ratio: 2.728176e-04	ci left: 9.878533e-01	ci right 9.881232e-01	k: 2479852	n:2510000
KS ci ratio: 1.839580e-01	ci left: 1.642402e-04	ci right 1.978869e-04	k: 453	n:2510000
PRG4   2510000 perm   3129 sec   (802 perm/sec)   p_kst 1.804781e-04   p_cons 9.879888e-01   p_joint 7.760956e-04

Joint ci ratio: 8.850932e-02	ci left: 7.433466e-04	ci right 8.125708e-04	k: 1959	n:2520000
Cons ci ratio: 2.722479e-04	ci left: 9.878560e-01	ci right 9.881254e-01	k: 2489738	n:2520000
KS ci ratio: 1.833532e-01	ci left: 1.647242e-04	ci right 1.983468e-04	k: 456	n:2520000
PRG4   2520000 perm   3151 sec   (800 perm/sec)   p_kst 1.809524e-04   p_cons 9.879913e-01   p_joint 7.773810e-04

Joint ci ratio: 8.841921e-02	ci left: 7.419545e-04	ci right 8.109751e-04	k: 1963	n:2530000
Cons ci ratio: 2.716954e-04	ci left: 9.878575e-01	ci right 9.881263e-01	k: 2499621	n:2530000
KS ci ratio: 1.833533e-01	ci left: 1.640731e-04	ci right 1.975628e-04	k: 456	n:2530000
PRG4   2530000 perm   3174 sec   (797 perm/sec)   p_kst 1.802372e-04   p_cons 9.879925e-01   p_joint 7.758893e-04

Joint ci ratio: 8.907996e-02	ci left: 7.278692e-04	ci right 7.961119e-04	k: 1934	n:2540000
Cons ci ratio: 2.711957e-04	ci left: 9.878547e-01	ci right 9.881230e-01	k: 2509493	n:2540000
KS ci ratio: 1.827544e-01	ci left: 1.645541e-04	ci right 1.980201e-04	k: 459	n:2540000
PRG4   2540000 perm   3197 sec   (795 perm/sec)   p_kst 1.807087e-04   p_cons 9.879894e-01   p_joint 7.614173e-04

Joint ci ratio: 8.942765e-02	ci left: 7.192636e-04	ci right 7.869765e-04	k: 1919	n:2550000
Cons ci ratio: 2.706539e-04	ci left: 9.878557e-01	ci right 9.881235e-01	k: 2519375	n:2550000
KS ci ratio: 1.825561e-01	ci left: 1.642830e-04	ci right 1.976537e-04	k: 460	n:2550000
PRG4   2550000 perm   3219 sec   (792 perm/sec)   p_kst 1.803922e-04   p_cons 9.879902e-01   p_joint 7.525490e-04

Joint ci ratio: 8.982663e-02	ci left: 7.099621e-04	ci right 7.771131e-04	k: 1902	n:2560000
Cons ci ratio: 2.701066e-04	ci left: 9.878576e-01	ci right 9.881249e-01	k: 2529259	n:2560000
KS ci ratio: 1.823584e-01	ci left: 1.640141e-04	ci right 1.972900e-04	k: 461	n:2560000
PRG4   2560000 perm   3242 sec   (790 perm/sec)   p_kst 1.800781e-04   p_cons 9.879918e-01   p_joint 7.429688e-04

Joint ci ratio: 8.966188e-02	ci left: 7.098622e-04	ci right 7.768741e-04	k: 1909	n:2570000
Cons ci ratio: 2.695802e-04	ci left: 9.878579e-01	ci right 9.881246e-01	k: 2539139	n:2570000
KS ci ratio: 1.819650e-01	ci left: 1.641186e-04	ci right 1.973360e-04	k: 463	n:2570000
PRG4   2570000 perm   3265 sec   (787 perm/sec)   p_kst 1.801556e-04   p_cons 9.879918e-01   p_joint 7.428016e-04

Joint ci ratio: 8.952141e-02	ci left: 7.093842e-04	ci right 7.762407e-04	k: 1915	n:2580000
Cons ci ratio: 2.690920e-04	ci left: 9.878551e-01	ci right 9.881213e-01	k: 2549011	n:2580000
KS ci ratio: 1.815741e-01	ci left: 1.642224e-04	ci right 1.973816e-04	k: 465	n:2580000
PRG4   2580000 perm   3288 sec   (785 perm/sec)   p_kst 1.802326e-04   p_cons 9.879888e-01   p_joint 7.422481e-04

Joint ci ratio: 8.933509e-02	ci left: 7.096650e-04	ci right 7.764015e-04	k: 1923	n:2590000
Cons ci ratio: 2.685846e-04	ci left: 9.878542e-01	ci right 9.881200e-01	k: 2558888	n:2590000
KS ci ratio: 1.811857e-01	ci left: 1.643255e-04	ci right 1.974267e-04	k: 467	n:2590000
PRG4   2590000 perm   3311 sec   (782 perm/sec)   p_kst 1.803089e-04   p_cons 9.879876e-01   p_joint 7.424710e-04

Joint ci ratio: 8.924243e-02	ci left: 7.084397e-04	ci right 7.749881e-04	k: 1927	n:2600000
Cons ci ratio: 2.680714e-04	ci left: 9.878541e-01	ci right 9.881194e-01	k: 2568767	n:2600000
KS ci ratio: 1.811857e-01	ci left: 1.636935e-04	ci right 1.966674e-04	k: 467	n:2600000
PRG4   2600000 perm   3334 sec   (780 perm/sec)   p_kst 1.796154e-04   p_cons 9.879873e-01   p_joint 7.411538e-04

Joint ci ratio: 8.910391e-02	ci left: 7.079729e-04	ci right 7.743689e-04	k: 1933	n:2610000
Cons ci ratio: 2.675611e-04	ci left: 9.878541e-01	ci right 9.881188e-01	k: 2578646	n:2610000
KS ci ratio: 1.809925e-01	ci left: 1.634321e-04	ci right 1.963144e-04	k: 468	n:2610000
PRG4   2610000 perm   3357 sec   (777 perm/sec)   p_kst 1.793103e-04   p_cons 9.879870e-01   p_joint 7.406130e-04

Joint ci ratio: 8.882868e-02	ci left: 7.097490e-04	ci right 7.760953e-04	k: 1945	n:2620000
Cons ci ratio: 2.671139e-04	ci left: 9.878486e-01	ci right 9.881129e-01	k: 2588511	n:2620000
KS ci ratio: 1.806078e-01	ci left: 1.635371e-04	ci right 1.963629e-04	k: 470	n:2620000
PRG4   2620000 perm   3380 sec   (775 perm/sec)   p_kst 1.793893e-04   p_cons 9.879813e-01   p_joint 7.423664e-04

Joint ci ratio: 8.862396e-02	ci left: 7.103965e-04	ci right 7.766423e-04	k: 1954	n:2630000
Cons ci ratio: 2.667114e-04	ci left: 9.878394e-01	ci right 9.881033e-01	k: 2598366	n:2630000
KS ci ratio: 1.802255e-01	ci left: 1.636414e-04	ci right 1.964111e-04	k: 472	n:2630000
PRG4   2630000 perm   3404 sec   (773 perm/sec)   p_kst 1.794677e-04   p_cons 9.879719e-01   p_joint 7.429658e-04

Joint ci ratio: 8.882893e-02	ci left: 7.043720e-04	ci right 7.702159e-04	k: 1945	n:2640000
Cons ci ratio: 2.661919e-04	ci left: 9.878409e-01	ci right 9.881043e-01	k: 2608249	n:2640000
KS ci ratio: 1.802256e-01	ci left: 1.630216e-04	ci right 1.956671e-04	k: 472	n:2640000
PRG4   2640000 perm   3427 sec   (770 perm/sec)   p_kst 1.787879e-04   p_cons 9.879731e-01   p_joint 7.367424e-04

Joint ci ratio: 8.892056e-02	ci left: 7.002381e-04	ci right 7.657665e-04	k: 1941	n:2650000
Cons ci ratio: 2.656121e-04	ci left: 9.878481e-01	ci right 9.881109e-01	k: 2618147	n:2650000
KS ci ratio: 1.798458e-01	ci left: 1.631271e-04	ci right 1.957174e-04	k: 474	n:2650000
PRG4   2650000 perm   3451 sec   (768 perm/sec)   p_kst 1.788679e-04   p_cons 9.879800e-01   p_joint 7.324528e-04

Joint ci ratio: 8.878353e-02	ci left: 6.998111e-04	ci right 7.651935e-04	k: 1947	n:2660000
Cons ci ratio: 2.651366e-04	ci left: 9.878461e-01	ci right 9.881084e-01	k: 2628021	n:2660000
KS ci ratio: 1.796568e-01	ci left: 1.628729e-04	ci right 1.953745e-04	k: 475	n:2660000
PRG4   2660000 perm   3475 sec   (765 perm/sec)   p_kst 1.785714e-04   p_cons 9.879778e-01   p_joint 7.319549e-04

Joint ci ratio: 8.882930e-02	ci left: 6.964576e-04	ci right 7.615619e-04	k: 1945	n:2670000
Cons ci ratio: 2.647347e-04	ci left: 9.878378e-01	ci right 9.880997e-01	k: 2637878	n:2670000
KS ci ratio: 1.794684e-01	ci left: 1.626205e-04	ci right 1.950341e-04	k: 476	n:2670000
PRG4   2670000 perm   3499 sec   (763 perm/sec)   p_kst 1.782772e-04   p_cons 9.879693e-01   p_joint 7.284644e-04

Joint ci ratio: 8.864726e-02	ci left: 6.967777e-04	ci right 7.617716e-04	k: 1953	n:2680000
Cons ci ratio: 2.641934e-04	ci left: 9.878423e-01	ci right 9.881037e-01	k: 2647769	n:2680000
KS ci ratio: 1.790933e-01	ci left: 1.627265e-04	ci right 1.950861e-04	k: 478	n:2680000
PRG4   2680000 perm   3523 sec   (761 perm/sec)   p_kst 1.783582e-04   p_cons 9.879735e-01   p_joint 7.287313e-04

Joint ci ratio: 8.842125e-02	ci left: 6.978227e-04	ci right 7.627395e-04	k: 1963	n:2690000
Cons ci ratio: 2.637379e-04	ci left: 9.878393e-01	ci right 9.881002e-01	k: 2657640	n:2690000
KS ci ratio: 1.787206e-01	ci left: 1.628318e-04	ci right 1.951376e-04	k: 480	n:2690000
PRG4   2690000 perm   3548 sec   (758 perm/sec)   p_kst 1.784387e-04   p_cons 9.879703e-01   p_joint 7.297398e-04

Joint ci ratio: 8.817461e-02	ci left: 6.992223e-04	ci right 7.640785e-04	k: 1974	n:2700000
Cons ci ratio: 2.632560e-04	ci left: 9.878389e-01	ci right 9.880993e-01	k: 2667518	n:2700000
KS ci ratio: 1.783502e-01	ci left: 1.629364e-04	ci right 1.951887e-04	k: 482	n:2700000
PRG4   2700000 perm   3572 sec   (756 perm/sec)   p_kst 1.785185e-04   p_cons 9.879696e-01   p_joint 7.311111e-04

Joint ci ratio: 8.797436e-02	ci left: 6.998900e-04	ci right 7.646532e-04	k: 1983	n:2710000
Cons ci ratio: 2.627563e-04	ci left: 9.878403e-01	ci right 9.881003e-01	k: 2677401	n:2710000
KS ci ratio: 1.776162e-01	ci left: 1.637454e-04	ci right 1.960101e-04	k: 486	n:2710000
PRG4   2710000 perm   3595 sec   (754 perm/sec)   p_kst 1.793358e-04   p_cons 9.879708e-01   p_joint 7.317343e-04

Joint ci ratio: 8.775344e-02	ci left: 7.009126e-04	ci right 7.655992e-04	k: 1993	n:2720000
Cons ci ratio: 2.622839e-04	ci left: 9.878396e-01	ci right 9.880991e-01	k: 2687278	n:2720000
KS ci ratio: 1.774341e-01	ci left: 1.634947e-04	ci right 1.956735e-04	k: 487	n:2720000
PRG4   2720000 perm   3619 sec   (752 perm/sec)   p_kst 1.790441e-04   p_cons 9.879699e-01   p_joint 7.327206e-04

Joint ci ratio: 8.779763e-02	ci left: 6.976286e-04	ci right 7.620461e-04	k: 1991	n:2730000
Cons ci ratio: 2.618421e-04	ci left: 9.878363e-01	ci right 9.880953e-01	k: 2697148	n:2730000
KS ci ratio: 1.772526e-01	ci left: 1.632458e-04	ci right 1.953393e-04	k: 488	n:2730000
PRG4   2730000 perm   3644 sec   (749 perm/sec)   p_kst 1.787546e-04   p_cons 9.879663e-01   p_joint 7.293040e-04

Joint ci ratio: 8.764378e-02	ci left: 6.975812e-04	ci right 7.618757e-04	k: 1998	n:2740000
Cons ci ratio: 2.613706e-04	ci left: 9.878359e-01	ci right 9.880945e-01	k: 2707026	n:2740000
KS ci ratio: 1.772527e-01	ci left: 1.626501e-04	ci right 1.946263e-04	k: 488	n:2740000
PRG4   2740000 perm   3668 sec   (747 perm/sec)   p_kst 1.781022e-04   p_cons 9.879657e-01   p_joint 7.291971e-04

Joint ci ratio: 8.817520e-02	ci left: 6.865089e-04	ci right 7.501864e-04	k: 1974	n:2750000
Cons ci ratio: 2.608776e-04	ci left: 9.878377e-01	ci right 9.880958e-01	k: 2716910	n:2750000
KS ci ratio: 1.768913e-01	ci left: 1.627536e-04	ci right 1.946781e-04	k: 490	n:2750000
PRG4   2750000 perm   3692 sec   (745 perm/sec)   p_kst 1.781818e-04   p_cons 9.879673e-01   p_joint 7.178182e-04

Joint ci ratio: 8.806383e-02	ci left: 6.857932e-04	ci right 7.493198e-04	k: 1979	n:2760000
Cons ci ratio: 2.603516e-04	ci left: 9.878428e-01	ci right 9.881004e-01	k: 2726803	n:2760000
KS ci ratio: 1.768914e-01	ci left: 1.621639e-04	ci right 1.939727e-04	k: 490	n:2760000
PRG4   2760000 perm   3716 sec   (743 perm/sec)   p_kst 1.775362e-04   p_cons 9.879721e-01   p_joint 7.170290e-04

Joint ci ratio: 8.801947e-02	ci left: 6.840236e-04	ci right 7.473527e-04	k: 1981	n:2770000
Cons ci ratio: 2.598841e-04	ci left: 9.878428e-01	ci right 9.880999e-01	k: 2736682	n:2770000
KS ci ratio: 1.763534e-01	ci left: 1.626137e-04	ci right 1.944033e-04	k: 493	n:2770000
PRG4   2770000 perm   3740 sec   (741 perm/sec)   p_kst 1.779783e-04   p_cons 9.879718e-01   p_joint 7.151625e-04

Joint ci ratio: 8.782027e-02	ci left: 6.847293e-04	ci right 7.479729e-04	k: 1990	n:2780000
Cons ci ratio: 2.594387e-04	ci left: 9.878409e-01	ci right 9.880976e-01	k: 2746556	n:2780000
KS ci ratio: 1.756436e-01	ci left: 1.634042e-04	ci right 1.952062e-04	k: 497	n:2780000
PRG4   2780000 perm   3764 sec   (739 perm/sec)   p_kst 1.787770e-04   p_cons 9.879698e-01   p_joint 7.158273e-04

Joint ci ratio: 8.773224e-02	ci left: 6.836773e-04	ci right 7.467572e-04	k: 1994	n:2790000
Cons ci ratio: 2.589916e-04	ci left: 9.878395e-01	ci right 9.880957e-01	k: 2756431	n:2790000
KS ci ratio: 1.751169e-01	ci left: 1.638466e-04	ci right 1.956290e-04	k: 500	n:2790000
PRG4   2790000 perm   3788 sec   (736 perm/sec)   p_kst 1.792115e-04   p_cons 9.879681e-01   p_joint 7.146953e-04

Joint ci ratio: 8.764447e-02	ci left: 6.826328e-04	ci right 7.455501e-04	k: 1998	n:2800000
Cons ci ratio: 2.585741e-04	ci left: 9.878355e-01	ci right 9.880913e-01	k: 2766299	n:2800000
KS ci ratio: 1.749424e-01	ci left: 1.636029e-04	ci right 1.953031e-04	k: 501	n:2800000
PRG4   2800000 perm   3813 sec   (734 perm/sec)   p_kst 1.789286e-04   p_cons 9.879639e-01   p_joint 7.135714e-04

Joint ci ratio: 8.878527e-02	ci left: 6.624541e-04	ci right 7.243475e-04	k: 1947	n:2810000
Cons ci ratio: 2.580890e-04	ci left: 9.878380e-01	ci right 9.880934e-01	k: 2776185	n:2810000
KS ci ratio: 1.749425e-01	ci left: 1.630207e-04	ci right 1.946080e-04	k: 501	n:2810000
PRG4   2810000 perm   3838 sec   (732 perm/sec)   p_kst 1.782918e-04   p_cons 9.879662e-01   p_joint 6.928826e-04

Joint ci ratio: 8.864887e-02	ci left: 6.621854e-04	ci right 7.239537e-04	k: 1953	n:2820000
Cons ci ratio: 2.576028e-04	ci left: 9.878409e-01	ci right 9.880957e-01	k: 2786072	n:2820000
KS ci ratio: 1.749426e-01	ci left: 1.624426e-04	ci right 1.939179e-04	k: 501	n:2820000
PRG4   2820000 perm   3863 sec   (730 perm/sec)   p_kst 1.776596e-04   p_cons 9.879688e-01   p_joint 6.925532e-04

Joint ci ratio: 8.842285e-02	ci left: 6.633009e-04	ci right 7.250074e-04	k: 1963	n:2830000
Cons ci ratio: 2.571231e-04	ci left: 9.878433e-01	ci right 9.880977e-01	k: 2795958	n:2830000
KS ci ratio: 1.745951e-01	ci left: 1.625444e-04	ci right 1.939703e-04	k: 503	n:2830000
PRG4   2830000 perm   3887 sec   (728 perm/sec)   p_kst 1.777385e-04   p_cons 9.879710e-01   p_joint 6.936396e-04

Joint ci ratio: 8.831054e-02	ci left: 6.626870e-04	ci right 7.242540e-04	k: 1968	n:2840000
Cons ci ratio: 2.566879e-04	ci left: 9.878419e-01	ci right 9.880958e-01	k: 2805833	n:2840000
KS ci ratio: 1.745952e-01	ci left: 1.619721e-04	ci right 1.932873e-04	k: 503	n:2840000
PRG4   2840000 perm   3912 sec   (726 perm/sec)   p_kst 1.771127e-04   p_cons 9.879694e-01   p_joint 6.929577e-04

Joint ci ratio: 9.004335e-02	ci left: 6.346323e-04	ci right 6.948108e-04	k: 1893	n:2850000
Cons ci ratio: 2.562096e-04	ci left: 9.878447e-01	ci right 9.880982e-01	k: 2815720	n:2850000
KS ci ratio: 1.740778e-01	ci left: 1.624104e-04	ci right 1.937076e-04	k: 506	n:2850000
PRG4   2850000 perm   3937 sec   (724 perm/sec)   p_kst 1.775439e-04   p_cons 9.879719e-01   p_joint 6.642105e-04

Joint ci ratio: 9.061981e-02	ci left: 6.242112e-04	ci right 6.838004e-04	k: 1869	n:2860000
Cons ci ratio: 2.557602e-04	ci left: 9.878450e-01	ci right 9.880980e-01	k: 2825600	n:2860000
KS ci ratio: 1.739064e-01	ci left: 1.621770e-04	ci right 1.933952e-04	k: 507	n:2860000
PRG4   2860000 perm   3962 sec   (722 perm/sec)   p_kst 1.772727e-04   p_cons 9.879720e-01   p_joint 6.534965e-04

Joint ci ratio: 9.052309e-02	ci left: 6.233984e-04	ci right 6.828431e-04	k: 1873	n:2870000
Cons ci ratio: 2.552608e-04	ci left: 9.878502e-01	ci right 9.881028e-01	k: 2835494	n:2870000
KS ci ratio: 1.737355e-01	ci left: 1.619452e-04	ci right 1.930849e-04	k: 508	n:2870000
PRG4   2870000 perm   3987 sec   (720 perm/sec)   p_kst 1.770035e-04   p_cons 9.879770e-01   p_joint 6.526132e-04

Joint ci ratio: 9.042667e-02	ci left: 6.225912e-04	ci right 6.818925e-04	k: 1877	n:2880000
Cons ci ratio: 2.548424e-04	ci left: 9.878481e-01	ci right 9.881002e-01	k: 2845367	n:2880000
KS ci ratio: 1.737356e-01	ci left: 1.613829e-04	ci right 1.924145e-04	k: 508	n:2880000
PRG4   2880000 perm   4011 sec   (718 perm/sec)   p_kst 1.763889e-04   p_cons 9.879747e-01   p_joint 6.517361e-04

Joint ci ratio: 9.023466e-02	ci left: 6.231426e-04	ci right 6.823637e-04	k: 1885	n:2890000
Cons ci ratio: 2.544113e-04	ci left: 9.878474e-01	ci right 9.880991e-01	k: 2855244	n:2890000
KS ci ratio: 1.733952e-01	ci left: 1.614864e-04	ci right 1.924708e-04	k: 510	n:2890000
PRG4   2890000 perm   4036 sec   (716 perm/sec)   p_kst 1.764706e-04   p_cons 9.879737e-01   p_joint 6.522491e-04

Joint ci ratio: 9.002009e-02	ci left: 6.240273e-04	ci right 6.831840e-04	k: 1894	n:2900000
Cons ci ratio: 2.539823e-04	ci left: 9.878466e-01	ci right 9.880979e-01	k: 2865121	n:2900000
KS ci ratio: 1.733953e-01	ci left: 1.609296e-04	ci right 1.918071e-04	k: 510	n:2900000
PRG4   2900000 perm   4061 sec   (714 perm/sec)   p_kst 1.758621e-04   p_cons 9.879728e-01   p_joint 6.531034e-04

Joint ci ratio: 9.028278e-02	ci left: 6.181880e-04	ci right 6.769712e-04	k: 1883	n:2910000
Cons ci ratio: 2.535262e-04	ci left: 9.878487e-01	ci right 9.880995e-01	k: 2875006	n:2910000
KS ci ratio: 1.730569e-01	ci left: 1.610341e-04	ci right 1.918650e-04	k: 512	n:2910000
PRG4   2910000 perm   4086 sec   (712 perm/sec)   p_kst 1.759450e-04   p_cons 9.879746e-01   p_joint 6.470790e-04

Joint ci ratio: 8.999653e-02	ci left: 6.200879e-04	ci right 6.788549e-04	k: 1895	n:2920000
Cons ci ratio: 2.531273e-04	ci left: 9.878455e-01	ci right 9.880960e-01	k: 2884876	n:2920000
KS ci ratio: 1.725531e-01	ci left: 1.614655e-04	ci right 1.922797e-04	k: 515	n:2920000
PRG4   2920000 perm   4112 sec   (710 perm/sec)   p_kst 1.763699e-04   p_cons 9.879712e-01   p_joint 6.489726e-04

Joint ci ratio: 8.983085e-02	ci left: 6.203069e-04	ci right 6.789808e-04	k: 1902	n:2930000
Cons ci ratio: 2.527011e-04	ci left: 9.878452e-01	ci right 9.880952e-01	k: 2894754	n:2930000
KS ci ratio: 1.722197e-01	ci left: 1.615676e-04	ci right 1.923355e-04	k: 517	n:2930000
PRG4   2930000 perm   4137 sec   (708 perm/sec)   p_kst 1.764505e-04   p_cons 9.879706e-01   p_joint 6.491468e-04

Joint ci ratio: 8.990189e-02	ci left: 6.171995e-04	ci right 6.756281e-04	k: 1899	n:2940000
Cons ci ratio: 2.523133e-04	ci left: 9.878414e-01	ci right 9.880910e-01	k: 2904622	n:2940000
KS ci ratio: 1.722197e-01	ci left: 1.610181e-04	ci right 1.916813e-04	k: 517	n:2940000
PRG4   2940000 perm   4162 sec   (706 perm/sec)   p_kst 1.758503e-04   p_cons 9.879667e-01   p_joint 6.459184e-04

Joint ci ratio: 8.978385e-02	ci left: 6.167641e-04	ci right 6.750708e-04	k: 1904	n:2950000
Cons ci ratio: 2.518625e-04	ci left: 9.878438e-01	ci right 9.880929e-01	k: 2914508	n:2950000
KS ci ratio: 1.718882e-01	ci left: 1.611210e-04	ci right 1.917387e-04	k: 519	n:2950000
PRG4   2950000 perm   4189 sec   (704 perm/sec)   p_kst 1.759322e-04   p_cons 9.879688e-01   p_joint 6.454237e-04

Joint ci ratio: 8.954907e-02	ci left: 6.179831e-04	ci right 6.762442e-04	k: 1914	n:2960000
Cons ci ratio: 2.514677e-04	ci left: 9.878410e-01	ci right 9.880898e-01	k: 2924379	n:2960000
KS ci ratio: 1.712308e-01	ci left: 1.618700e-04	ci right 1.925002e-04	k: 523	n:2960000
PRG4   2960000 perm   4216 sec   (702 perm/sec)   p_kst 1.766892e-04   p_cons 9.879659e-01   p_joint 6.466216e-04

Joint ci ratio: 8.947906e-02	ci left: 6.168898e-04	ci right 6.750000e-04	k: 1917	n:2970000
Cons ci ratio: 2.510215e-04	ci left: 9.878434e-01	ci right 9.880917e-01	k: 2934265	n:2970000
KS ci ratio: 1.712309e-01	ci left: 1.613250e-04	ci right 1.918521e-04	k: 523	n:2970000
PRG4   2970000 perm   4241 sec   (700 perm/sec)   p_kst 1.760943e-04   p_cons 9.879680e-01   p_joint 6.454545e-04

Joint ci ratio: 8.940922e-02	ci left: 6.158039e-04	ci right 6.737642e-04	k: 1920	n:2980000
Cons ci ratio: 2.506271e-04	ci left: 9.878410e-01	ci right 9.880889e-01	k: 2944137	n:2980000
KS ci ratio: 1.712309e-01	ci left: 1.607836e-04	ci right 1.912083e-04	k: 523	n:2980000
PRG4   2980000 perm   4267 sec   (698 perm/sec)   p_kst 1.755034e-04   p_cons 9.879654e-01   p_joint 6.442953e-04

Joint ci ratio: 8.936278e-02	ci left: 6.143983e-04	ci right 6.721947e-04	k: 1922	n:2990000
Cons ci ratio: 2.501747e-04	ci left: 9.878443e-01	ci right 9.880918e-01	k: 2954026	n:2990000
KS ci ratio: 1.710678e-01	ci left: 1.605660e-04	ci right 1.909175e-04	k: 524	n:2990000
PRG4   2990000 perm   4293 sec   (697 perm/sec)   p_kst 1.752508e-04   p_cons 9.879686e-01   p_joint 6.428094e-04

Joint ci ratio: 8.920056e-02	ci left: 6.146315e-04	ci right 6.723394e-04	k: 1929	n:3000000
Cons ci ratio: 2.497948e-04	ci left: 9.878410e-01	ci right 9.880881e-01	k: 2963895	n:3000000
KS ci ratio: 1.707429e-01	ci left: 1.606689e-04	ci right 1.909763e-04	k: 526	n:3000000
PRG4   3000000 perm   4319 sec   (695 perm/sec)   p_kst 1.753333e-04   p_cons 9.879650e-01   p_joint 6.430000e-04

Joint ci ratio: 8.903923e-02	ci left: 6.148633e-04	ci right 6.724831e-04	k: 1936	n:3010000
Cons ci ratio: 2.493957e-04	ci left: 9.878396e-01	ci right 9.880863e-01	k: 2973770	n:3010000
KS ci ratio: 1.702589e-01	ci left: 1.610893e-04	ci right 1.913810e-04	k: 529	n:3010000
PRG4   3010000 perm   4345 sec   (693 perm/sec)   p_kst 1.757475e-04   p_cons 9.879635e-01   p_joint 6.431894e-04

Joint ci ratio: 8.906233e-02	ci left: 6.125035e-04	ci right 6.699179e-04	k: 1935	n:3020000
Cons ci ratio: 2.489881e-04	ci left: 9.878393e-01	ci right 9.880856e-01	k: 2983648	n:3020000
KS ci ratio: 1.693032e-01	ci left: 1.624582e-04	ci right 1.928184e-04	k: 535	n:3020000
PRG4   3020000 perm   4371 sec   (691 perm/sec)   p_kst 1.771523e-04   p_cons 9.879629e-01   p_joint 6.407285e-04

Joint ci ratio: 8.894757e-02	ci left: 6.120955e-04	ci right 6.693938e-04	k: 1940	n:3030000
Cons ci ratio: 2.485894e-04	ci left: 9.878383e-01	ci right 9.880842e-01	k: 2993524	n:3030000
KS ci ratio: 1.689882e-01	ci left: 1.625542e-04	ci right 1.928700e-04	k: 537	n:3030000
PRG4   3030000 perm   4397 sec   (689 perm/sec)   p_kst 1.772277e-04   p_cons 9.879617e-01   p_joint 6.402640e-04

Joint ci ratio: 8.892474e-02	ci left: 6.104036e-04	ci right 6.675282e-04	k: 1941	n:3040000
Cons ci ratio: 2.481858e-04	ci left: 9.878380e-01	ci right 9.880835e-01	k: 3003402	n:3040000
KS ci ratio: 1.688314e-01	ci left: 1.623345e-04	ci right 1.925784e-04	k: 538	n:3040000
PRG4   3040000 perm   4423 sec   (687 perm/sec)   p_kst 1.769737e-04   p_cons 9.879612e-01   p_joint 6.384868e-04

Joint ci ratio: 8.947982e-02	ci left: 6.007089e-04	ci right 6.572954e-04	k: 1917	n:3050000
Cons ci ratio: 2.477704e-04	ci left: 9.878389e-01	ci right 9.880841e-01	k: 3013284	n:3050000
KS ci ratio: 1.685190e-01	ci left: 1.624303e-04	ci right 1.926304e-04	k: 540	n:3050000
PRG4   3050000 perm   4450 sec   (685 perm/sec)   p_kst 1.770492e-04   p_cons 9.879620e-01   p_joint 6.285246e-04

Joint ci ratio: 8.083236e-02	ci left: 7.369256e-04	ci right 7.993195e-04	k: 2349	n:3060000
Cons ci ratio: 2.473605e-04	ci left: 9.878396e-01	ci right 9.880843e-01	k: 3023165	n:3060000
KS ci ratio: 1.680536e-01	ci left: 1.628386e-04	ci right 1.930225e-04	k: 543	n:3060000
PRG4   3060000 perm   4476 sec   (684 perm/sec)   p_kst 1.774510e-04   p_cons 9.879624e-01   p_joint 7.676471e-04

Joint ci ratio: 8.124873e-02	ci left: 7.268659e-04	ci right 7.887400e-04	k: 2325	n:3070000
Cons ci ratio: 2.469594e-04	ci left: 9.878396e-01	ci right 9.880839e-01	k: 3033044	n:3070000
KS ci ratio: 1.675921e-01	ci left: 1.632444e-04	ci right 1.934120e-04	k: 546	n:3070000
PRG4   3070000 perm   4503 sec   (682 perm/sec)   p_kst 1.778502e-04   p_cons 9.879622e-01   p_joint 7.573290e-04

Joint ci ratio: 7.621685e-02	ci left: 8.254053e-04	ci right 8.911234e-04	k: 2642	n:3080000
Cons ci ratio: 2.466007e-04	ci left: 9.878357e-01	ci right 9.880796e-01	k: 3042911	n:3080000
KS ci ratio: 1.672866e-01	ci left: 1.633365e-04	ci right 1.934605e-04	k: 548	n:3080000
PRG4   3080000 perm   4530 sec   (680 perm/sec)   p_kst 1.779221e-04   p_cons 9.879581e-01   p_joint 8.577922e-04

Joint ci ratio: 7.613052e-02	ci left: 8.246388e-04	ci right 8.902182e-04	k: 2648	n:3090000
Cons ci ratio: 2.462535e-04	ci left: 9.878308e-01	ci right 9.880744e-01	k: 3052775	n:3090000
KS ci ratio: 1.671345e-01	ci left: 1.631180e-04	ci right 1.931716e-04	k: 549	n:3090000
PRG4   3090000 perm   4558 sec   (678 perm/sec)   p_kst 1.776699e-04   p_cons 9.879531e-01   p_joint 8.569579e-04

Joint ci ratio: 7.597291e-02	ci left: 8.254596e-04	ci right 8.909624e-04	k: 2659	n:3100000
Cons ci ratio: 2.457777e-04	ci left: 9.878386e-01	ci right 9.880818e-01	k: 3062678	n:3100000
KS ci ratio: 1.666805e-01	ci left: 1.635191e-04	ci right 1.935566e-04	k: 552	n:3100000
PRG4   3100000 perm   4585 sec   (676 perm/sec)   p_kst 1.780645e-04   p_cons 9.879606e-01   p_joint 8.577419e-04

Joint ci ratio: 7.750452e-02	ci left: 7.900060e-04	ci right 8.540162e-04	k: 2555	n:3110000
Cons ci ratio: 2.454042e-04	ci left: 9.878367e-01	ci right 9.880794e-01	k: 3072551	n:3110000
KS ci ratio: 1.662301e-01	ci left: 1.639178e-04	ci right 1.939390e-04	k: 555	n:3110000
PRG4   3110000 perm   4612 sec   (674 perm/sec)   p_kst 1.784566e-04   p_cons 9.879585e-01   p_joint 8.215434e-04

Joint ci ratio: 7.744400e-02	ci left: 7.887311e-04	ci right 8.525858e-04	k: 2559	n:3120000
Cons ci ratio: 2.450323e-04	ci left: 9.878348e-01	ci right 9.880772e-01	k: 3082424	n:3120000
KS ci ratio: 1.662302e-01	ci left: 1.633924e-04	ci right 1.933174e-04	k: 555	n:3120000
PRG4   3120000 perm   4639 sec   (673 perm/sec)   p_kst 1.778846e-04   p_cons 9.879564e-01   p_joint 8.201923e-04

Joint ci ratio: 7.742897e-02	ci left: 7.865245e-04	ci right 8.501876e-04	k: 2560	n:3130000
Cons ci ratio: 2.445767e-04	ci left: 9.878412e-01	ci right 9.880831e-01	k: 3092323	n:3130000
KS ci ratio: 1.660809e-01	ci left: 1.631766e-04	ci right 1.930326e-04	k: 556	n:3130000
PRG4   3130000 perm   4665 sec   (671 perm/sec)   p_kst 1.776358e-04   p_cons 9.879626e-01   p_joint 8.178914e-04

Joint ci ratio: 7.733845e-02	ci left: 7.858934e-04	ci right 8.494278e-04	k: 2566	n:3140000
Cons ci ratio: 2.441432e-04	ci left: 9.878457e-01	ci right 9.880872e-01	k: 3102216	n:3140000
KS ci ratio: 1.659321e-01	ci left: 1.629621e-04	ci right 1.927495e-04	k: 557	n:3140000
PRG4   3140000 perm   4692 sec   (669 perm/sec)   p_kst 1.773885e-04   p_cons 9.879669e-01   p_joint 8.171975e-04

Joint ci ratio: 8.124951e-02	ci left: 7.084055e-04	ci right 7.687088e-04	k: 2325	n:3150000
Cons ci ratio: 2.437087e-04	ci left: 9.878504e-01	ci right 9.880915e-01	k: 3112110	n:3150000
KS ci ratio: 1.656355e-01	ci left: 1.630534e-04	ci right 1.927988e-04	k: 559	n:3150000
PRG4   3150000 perm   4719 sec   (667 perm/sec)   p_kst 1.774603e-04   p_cons 9.879714e-01   p_joint 7.380952e-04

Joint ci ratio: 8.111014e-02	ci left: 7.086440e-04	ci right 7.688592e-04	k: 2333	n:3160000
Cons ci ratio: 2.432862e-04	ci left: 9.878542e-01	ci right 9.880949e-01	k: 3122001	n:3160000
KS ci ratio: 1.651936e-01	ci left: 1.634475e-04	ci right 1.931773e-04	k: 562	n:3160000
PRG4   3160000 perm   4746 sec   (666 perm/sec)   p_kst 1.778481e-04   p_cons 9.879750e-01   p_joint 7.382911e-04

Joint ci ratio: 8.095418e-02	ci left: 7.091901e-04	ci right 7.693304e-04	k: 2342	n:3170000
Cons ci ratio: 2.429014e-04	ci left: 9.878545e-01	ci right 9.880948e-01	k: 3131881	n:3170000
KS ci ratio: 1.647552e-01	ci left: 1.638392e-04	ci right 1.935534e-04	k: 565	n:3170000
PRG4   3170000 perm   4773 sec   (664 perm/sec)   p_kst 1.782334e-04   p_cons 9.879751e-01   p_joint 7.388013e-04

Joint ci ratio: 8.083353e-02	ci left: 7.091167e-04	ci right 7.691569e-04	k: 2349	n:3180000
Cons ci ratio: 2.425023e-04	ci left: 9.878563e-01	ci right 9.880962e-01	k: 3141766	n:3180000
KS ci ratio: 1.646098e-01	ci left: 1.636254e-04	ci right 1.932721e-04	k: 566	n:3180000
PRG4   3180000 perm   4801 sec   (662 perm/sec)   p_kst 1.779874e-04   p_cons 9.879767e-01   p_joint 7.386792e-04

Joint ci ratio: 8.071341e-02	ci left: 7.090438e-04	ci right 7.689845e-04	k: 2356	n:3190000
Cons ci ratio: 2.420796e-04	ci left: 9.878607e-01	ci right 9.881002e-01	k: 3151659	n:3190000
KS ci ratio: 1.644649e-01	ci left: 1.634131e-04	ci right 1.929926e-04	k: 567	n:3190000
PRG4   3190000 perm   4828 sec   (661 perm/sec)   p_kst 1.777429e-04   p_cons 9.879809e-01   p_joint 7.385580e-04

Joint ci ratio: 8.050867e-02	ci left: 7.105025e-04	ci right 7.704069e-04	k: 2368	n:3200000
Cons ci ratio: 2.416559e-04	ci left: 9.878653e-01	ci right 9.881044e-01	k: 3161553	n:3200000
KS ci ratio: 1.641761e-01	ci left: 1.635017e-04	ci right 1.930402e-04	k: 569	n:3200000
PRG4   3200000 perm   4855 sec   (659 perm/sec)   p_kst 1.778125e-04   p_cons 9.879853e-01   p_joint 7.400000e-04

Joint ci ratio: 8.255682e-02	ci left: 6.728881e-04	ci right 7.311340e-04	k: 2252	n:3210000
Cons ci ratio: 2.413041e-04	ci left: 9.878631e-01	ci right 9.881018e-01	k: 3171425	n:3210000
KS ci ratio: 1.641761e-01	ci left: 1.629924e-04	ci right 1.924388e-04	k: 569	n:3210000
PRG4   3210000 perm   4882 sec   (657 perm/sec)   p_kst 1.772586e-04   p_cons 9.879829e-01   p_joint 7.015576e-04

Joint ci ratio: 8.230142e-02	ci left: 6.750566e-04	ci right 7.333007e-04	k: 2266	n:3220000
Cons ci ratio: 2.409128e-04	ci left: 9.878649e-01	ci right 9.881032e-01	k: 3181310	n:3220000
KS ci ratio: 1.633187e-01	ci left: 1.642732e-04	ci right 1.937808e-04	k: 575	n:3220000
PRG4   3220000 perm   4910 sec   (656 perm/sec)   p_kst 1.785714e-04   p_cons 9.879845e-01   p_joint 7.037267e-04

Joint ci ratio: 8.259369e-02	ci left: 6.681151e-04	ci right 7.259749e-04	k: 2250	n:3230000
Cons ci ratio: 2.405359e-04	ci left: 9.878654e-01	ci right 9.881034e-01	k: 3191191	n:3230000
KS ci ratio: 1.633187e-01	ci left: 1.637646e-04	ci right 1.931809e-04	k: 575	n:3230000
PRG4   3230000 perm   4938 sec   (654 perm/sec)   p_kst 1.780186e-04   p_cons 9.879848e-01   p_joint 6.965944e-04

Joint ci ratio: 8.264891e-02	ci left: 6.651462e-04	ci right 7.227892e-04	k: 2247	n:3240000
Cons ci ratio: 2.401765e-04	ci left: 9.878644e-01	ci right 9.881020e-01	k: 3201067	n:3240000
KS ci ratio: 1.631772e-01	ci left: 1.635552e-04	ci right 1.929059e-04	k: 576	n:3240000
PRG4   3240000 perm   4966 sec   (652 perm/sec)   p_kst 1.777778e-04   p_cons 9.879836e-01   p_joint 6.935185e-04

Joint ci ratio: 8.244739e-02	ci left: 6.664144e-04	ci right 7.240197e-04	k: 2258	n:3250000
Cons ci ratio: 2.398403e-04	ci left: 9.878612e-01	ci right 9.880985e-01	k: 3210936	n:3250000
KS ci ratio: 1.624747e-01	ci left: 1.645277e-04	ci right 1.939134e-04	k: 581	n:3250000
PRG4   3250000 perm   4994 sec   (651 perm/sec)   p_kst 1.787692e-04   p_cons 9.879803e-01   p_joint 6.947692e-04

Joint ci ratio: 8.228361e-02	ci left: 6.670741e-04	ci right 7.246164e-04	k: 2267	n:3260000
Cons ci ratio: 2.394778e-04	ci left: 9.878609e-01	ci right 9.880978e-01	k: 3220814	n:3260000
KS ci ratio: 1.620575e-01	ci left: 1.649059e-04	ci right 1.942762e-04	k: 584	n:3260000
PRG4   3260000 perm   5023 sec   (649 perm/sec)   p_kst 1.791411e-04   p_cons 9.879798e-01   p_joint 6.953988e-04

Joint ci ratio: 8.279673e-02	ci left: 6.566480e-04	ci right 7.136612e-04	k: 2239	n:3270000
Cons ci ratio: 2.391045e-04	ci left: 9.878617e-01	ci right 9.880983e-01	k: 3230696	n:3270000
KS ci ratio: 1.620575e-01	ci left: 1.644016e-04	ci right 1.936821e-04	k: 584	n:3270000
PRG4   3270000 perm   5051 sec   (647 perm/sec)   p_kst 1.785933e-04   p_cons 9.879804e-01   p_joint 6.847095e-04

Joint ci ratio: 8.272294e-02	ci left: 6.558403e-04	ci right 7.127302e-04	k: 2243	n:3280000
Cons ci ratio: 2.387637e-04	ci left: 9.878595e-01	ci right 9.880957e-01	k: 3240568	n:3280000
KS ci ratio: 1.619192e-01	ci left: 1.641929e-04	ci right 1.934088e-04	k: 585	n:3280000
PRG4   3280000 perm   5079 sec   (646 perm/sec)   p_kst 1.783537e-04   p_cons 9.879780e-01   p_joint 6.838415e-04

Joint ci ratio: 8.300109e-02	ci left: 6.493819e-04	ci right 7.059102e-04	k: 2228	n:3290000
Cons ci ratio: 2.384395e-04	ci left: 9.878558e-01	ci right 9.880917e-01	k: 3250435	n:3290000
KS ci ratio: 1.616436e-01	ci left: 1.642771e-04	ci right 1.934534e-04	k: 587	n:3290000
PRG4   3290000 perm   5108 sec   (644 perm/sec)   p_kst 1.784195e-04   p_cons 9.879742e-01   p_joint 6.772036e-04

Joint ci ratio: 8.288961e-02	ci left: 6.491946e-04	ci right 7.056270e-04	k: 2234	n:3300000
Cons ci ratio: 2.380772e-04	ci left: 9.878561e-01	ci right 9.880916e-01	k: 3260315	n:3300000
KS ci ratio: 1.615063e-01	ci left: 1.640701e-04	ci right 1.931825e-04	k: 588	n:3300000
PRG4   3300000 perm   5137 sec   (642 perm/sec)   p_kst 1.781818e-04   p_cons 9.879742e-01   p_joint 6.769697e-04

Joint ci ratio: 8.274165e-02	ci left: 6.496001e-04	ci right 7.059621e-04	k: 2242	n:3310000
Cons ci ratio: 2.377588e-04	ci left: 9.878521e-01	ci right 9.880873e-01	k: 3270181	n:3310000
KS ci ratio: 1.610966e-01	ci left: 1.644442e-04	ci right 1.935417e-04	k: 591	n:3310000
PRG4   3310000 perm   5166 sec   (641 perm/sec)   p_kst 1.785498e-04   p_cons 9.879701e-01   p_joint 6.773414e-04

Joint ci ratio: 8.263121e-02	ci left: 6.494134e-04	ci right 7.056803e-04	k: 2248	n:3320000
Cons ci ratio: 2.373755e-04	ci left: 9.878548e-01	ci right 9.880896e-01	k: 3280069	n:3320000
KS ci ratio: 1.609607e-01	ci left: 1.642379e-04	ci right 1.932721e-04	k: 592	n:3320000
PRG4   3320000 perm   5194 sec   (639 perm/sec)   p_kst 1.783133e-04   p_cons 9.879726e-01   p_joint 6.771084e-04

Joint ci ratio: 8.252122e-02	ci left: 6.492278e-04	ci right 7.054001e-04	k: 2254	n:3330000
Cons ci ratio: 2.370389e-04	ci left: 9.878529e-01	ci right 9.880874e-01	k: 3289942	n:3330000
KS ci ratio: 1.606900e-01	ci left: 1.643211e-04	ci right 1.933165e-04	k: 594	n:3330000
PRG4   3330000 perm   5222 sec   (638 perm/sec)   p_kst 1.783784e-04   p_cons 9.879706e-01   p_joint 6.768769e-04

Joint ci ratio: 8.237521e-02	ci left: 6.496298e-04	ci right 7.057327e-04	k: 2262	n:3340000
Cons ci ratio: 2.367634e-04	ci left: 9.878450e-01	ci right 9.880793e-01	k: 3299795	n:3340000
KS ci ratio: 1.601525e-01	ci left: 1.649787e-04	ci right 1.939833e-04	k: 598	n:3340000
PRG4   3340000 perm   5251 sec   (636 perm/sec)   p_kst 1.790419e-04   p_cons 9.879626e-01   p_joint 6.772455e-04

Joint ci ratio: 8.248479e-02	ci left: 6.459364e-04	ci right 7.017982e-04	k: 2256	n:3350000
Cons ci ratio: 2.364294e-04	ci left: 9.878432e-01	ci right 9.880771e-01	k: 3309668	n:3350000
KS ci ratio: 1.600190e-01	ci left: 1.647728e-04	ci right 1.937147e-04	k: 599	n:3350000
PRG4   3350000 perm   5280 sec   (635 perm/sec)   p_kst 1.788060e-04   p_cons 9.879606e-01   p_joint 6.734328e-04

Joint ci ratio: 8.239360e-02	ci left: 6.454714e-04	ci right 7.012283e-04	k: 2261	n:3360000
Cons ci ratio: 2.361086e-04	ci left: 9.878402e-01	ci right 9.880738e-01	k: 3319537	n:3360000
KS ci ratio: 1.598858e-01	ci left: 1.645681e-04	ci right 1.934477e-04	k: 600	n:3360000
PRG4   3360000 perm   5309 sec   (633 perm/sec)   p_kst 1.785714e-04   p_cons 9.879574e-01   p_joint 6.729167e-04

Joint ci ratio: 8.228455e-02	ci left: 6.452998e-04	ci right 7.009645e-04	k: 2267	n:3370000
Cons ci ratio: 2.357480e-04	ci left: 9.878414e-01	ci right 9.880746e-01	k: 3329420	n:3370000
KS ci ratio: 1.596204e-01	ci left: 1.646495e-04	ci right 1.934909e-04	k: 602	n:3370000
PRG4   3370000 perm   5338 sec   (631 perm/sec)   p_kst 1.786350e-04   p_cons 9.879585e-01   p_joint 6.727003e-04

Joint ci ratio: 8.224835e-02	ci left: 6.439702e-04	ci right 6.994946e-04	k: 2269	n:3380000
Cons ci ratio: 2.354241e-04	ci left: 9.878391e-01	ci right 9.880719e-01	k: 3339291	n:3380000
KS ci ratio: 1.594883e-01	ci left: 1.644464e-04	ci right 1.932261e-04	k: 603	n:3380000
PRG4   3380000 perm   5368 sec   (630 perm/sec)   p_kst 1.784024e-04   p_cons 9.879559e-01   p_joint 6.713018e-04

Joint ci ratio: 8.212182e-02	ci left: 6.440930e-04	ci right 6.995385e-04	k: 2276	n:3390000
Cons ci ratio: 2.350957e-04	ci left: 9.878373e-01	ci right 9.880698e-01	k: 3349164	n:3390000
KS ci ratio: 1.589627e-01	ci left: 1.650942e-04	ci right 1.938830e-04	k: 607	n:3390000
PRG4   3390000 perm   5396 sec   (628 perm/sec)   p_kst 1.790560e-04   p_cons 9.879540e-01   p_joint 6.713864e-04

Joint ci ratio: 8.203183e-02	ci left: 6.436390e-04	ci right 6.989818e-04	k: 2281	n:3400000
Cons ci ratio: 2.347658e-04	ci left: 9.878358e-01	ci right 9.880680e-01	k: 3359038	n:3400000
KS ci ratio: 1.589628e-01	ci left: 1.646087e-04	ci right 1.933127e-04	k: 607	n:3400000
PRG4   3400000 perm   5426 sec   (627 perm/sec)   p_kst 1.785294e-04   p_cons 9.879524e-01   p_joint 6.708824e-04

Joint ci ratio: 8.190630e-02	ci left: 6.437622e-04	ci right 6.990269e-04	k: 2288	n:3410000
Cons ci ratio: 2.344546e-04	ci left: 9.878326e-01	ci right 9.880645e-01	k: 3368906	n:3410000
KS ci ratio: 1.587019e-01	ci left: 1.646891e-04	ci right 1.933556e-04	k: 609	n:3410000
PRG4   3410000 perm   5456 sec   (625 perm/sec)   p_kst 1.785924e-04   p_cons 9.879490e-01   p_joint 6.709677e-04

Joint ci ratio: 8.244881e-02	ci left: 6.332881e-04	ci right 6.880309e-04	k: 2258	n:3420000
Cons ci ratio: 2.340698e-04	ci left: 9.878370e-01	ci right 9.880686e-01	k: 3378800	n:3420000
KS ci ratio: 1.587020e-01	ci left: 1.642076e-04	ci right 1.927903e-04	k: 609	n:3420000
PRG4   3420000 perm   5486 sec   (623 perm/sec)   p_kst 1.780702e-04   p_cons 9.879532e-01   p_joint 6.602339e-04

Joint ci ratio: 8.228503e-02	ci left: 6.340116e-04	ci right 6.887029e-04	k: 2267	n:3430000
Cons ci ratio: 2.337528e-04	ci left: 9.878347e-01	ci right 9.880659e-01	k: 3388671	n:3430000
KS ci ratio: 1.583131e-01	ci left: 1.645688e-04	ci right 1.931375e-04	k: 612	n:3430000
PRG4   3430000 perm   5515 sec   (622 perm/sec)   p_kst 1.784257e-04   p_cons 9.879507e-01   p_joint 6.609329e-04

Joint ci ratio: 8.215834e-02	ci left: 6.341616e-04	ci right 6.887776e-04	k: 2274	n:3440000
Cons ci ratio: 2.334113e-04	ci left: 9.878350e-01	ci right 9.880659e-01	k: 3398551	n:3440000
KS ci ratio: 1.579271e-01	ci left: 1.649280e-04	ci right 1.934826e-04	k: 615	n:3440000
PRG4   3440000 perm   5545 sec   (620 perm/sec)   p_kst 1.787791e-04   p_cons 9.879509e-01   p_joint 6.610465e-04

Joint ci ratio: 8.203223e-02	ci left: 6.343108e-04	ci right 6.888518e-04	k: 2281	n:3450000
Cons ci ratio: 2.330629e-04	ci left: 9.878362e-01	ci right 9.880667e-01	k: 3408434	n:3450000
KS ci ratio: 1.576714e-01	ci left: 1.650068e-04	ci right 1.935244e-04	k: 617	n:3450000
PRG4   3450000 perm   5575 sec   (619 perm/sec)   p_kst 1.788406e-04   p_cons 9.879519e-01   p_joint 6.611594e-04

Joint ci ratio: 8.194253e-02	ci left: 6.338930e-04	ci right 6.883356e-04	k: 2286	n:3460000
Cons ci ratio: 2.326906e-04	ci left: 9.878400e-01	ci right 9.880702e-01	k: 3418326	n:3460000
KS ci ratio: 1.572900e-01	ci left: 1.653627e-04	ci right 1.938663e-04	k: 620	n:3460000
PRG4   3460000 perm   5604 sec   (617 perm/sec)   p_kst 1.791908e-04   p_cons 9.879555e-01   p_joint 6.606936e-04

Joint ci ratio: 8.179957e-02	ci left: 6.343245e-04	ci right 6.887046e-04	k: 2294	n:3470000
Cons ci ratio: 2.322778e-04	ci left: 9.878481e-01	ci right 9.880779e-01	k: 3428233	n:3470000
KS ci ratio: 1.570374e-01	ci left: 1.654399e-04	ci right 1.939066e-04	k: 622	n:3470000
PRG4   3470000 perm   5634 sec   (616 perm/sec)   p_kst 1.792507e-04   p_cons 9.879634e-01   p_joint 6.610951e-04

Joint ci ratio: 8.176400e-02	ci left: 6.330647e-04	ci right 6.873120e-04	k: 2296	n:3480000
Cons ci ratio: 2.319008e-04	ci left: 9.878527e-01	ci right 9.880821e-01	k: 3438128	n:3480000
KS ci ratio: 1.565356e-01	ci left: 1.660688e-04	ci right 1.945439e-04	k: 626	n:3480000
PRG4   3480000 perm   5664 sec   (614 perm/sec)   p_kst 1.798851e-04   p_cons 9.879678e-01   p_joint 6.597701e-04

Joint ci ratio: 8.241286e-02	ci left: 6.211471e-04	ci right 6.748159e-04	k: 2260	n:3490000
Cons ci ratio: 2.315088e-04	ci left: 9.878590e-01	ci right 9.880880e-01	k: 3448029	n:3490000
KS ci ratio: 1.562865e-01	ci left: 1.661436e-04	ci right 1.945819e-04	k: 628	n:3490000
PRG4   3490000 perm   5694 sec   (613 perm/sec)   p_kst 1.799427e-04   p_cons 9.879739e-01   p_joint 6.475645e-04

Joint ci ratio: 8.224930e-02	ci left: 6.218909e-04	ci right 6.755122e-04	k: 2269	n:3500000
Cons ci ratio: 2.311576e-04	ci left: 9.878613e-01	ci right 9.880899e-01	k: 3457916	n:3500000
KS ci ratio: 1.559151e-01	ci left: 1.664926e-04	ci right 1.949166e-04	k: 631	n:3500000
PRG4   3500000 perm   5723 sec   (612 perm/sec)   p_kst 1.802857e-04   p_cons 9.879760e-01   p_joint 6.482857e-04

Joint ci ratio: 8.214082e-02	ci left: 6.217934e-04	ci right 6.753322e-04	k: 2275	n:3510000
Cons ci ratio: 2.308108e-04	ci left: 9.878632e-01	ci right 9.880915e-01	k: 3467802	n:3510000
KS ci ratio: 1.556690e-01	ci left: 1.665658e-04	ci right 1.949532e-04	k: 633	n:3510000
PRG4   3510000 perm   5754 sec   (610 perm/sec)   p_kst 1.803419e-04   p_cons 9.879778e-01   p_joint 6.481481e-04

Joint ci ratio: 8.194299e-02	ci left: 6.230879e-04	ci right 6.766028e-04	k: 2286	n:3520000
Cons ci ratio: 2.304794e-04	ci left: 9.878637e-01	ci right 9.880917e-01	k: 3477683	n:3520000
KS ci ratio: 1.554240e-01	ci left: 1.666387e-04	ci right 1.949897e-04	k: 635	n:3520000
PRG4   3520000 perm   5785 sec   (608 perm/sec)   p_kst 1.803977e-04   p_cons 9.879781e-01   p_joint 6.494318e-04

Joint ci ratio: 8.389274e-02	ci left: 5.921940e-04	ci right 6.443249e-04	k: 2181	n:3530000
Cons ci ratio: 2.301383e-04	ci left: 9.878654e-01	ci right 9.880930e-01	k: 3487568	n:3530000
KS ci ratio: 1.553020e-01	ci left: 1.664389e-04	ci right 1.947316e-04	k: 636	n:3530000
PRG4   3530000 perm   5817 sec   (607 perm/sec)   p_kst 1.801700e-04   p_cons 9.879796e-01   p_joint 6.178470e-04

Joint ci ratio: 8.373935e-02	ci left: 5.927336e-04	ci right 6.448120e-04	k: 2189	n:3540000
Cons ci ratio: 2.298535e-04	ci left: 9.878613e-01	ci right 9.880887e-01	k: 3497433	n:3540000
KS ci ratio: 1.548167e-01	ci left: 1.670549e-04	ci right 1.953552e-04	k: 640	n:3540000
PRG4   3540000 perm   5847 sec   (605 perm/sec)   p_kst 1.807910e-04   p_cons 9.879754e-01   p_joint 6.183616e-04

Joint ci ratio: 8.362487e-02	ci left: 5.927187e-04	ci right 6.447211e-04	k: 2195	n:3550000
Cons ci ratio: 2.294908e-04	ci left: 9.878655e-01	ci right 9.880925e-01	k: 3507327	n:3550000
KS ci ratio: 1.546960e-01	ci left: 1.668551e-04	ci right 1.950975e-04	k: 641	n:3550000
PRG4   3550000 perm   5878 sec   (604 perm/sec)   p_kst 1.805634e-04   p_cons 9.879794e-01   p_joint 6.183099e-04

Joint ci ratio: 8.347294e-02	ci left: 5.932540e-04	ci right 6.452043e-04	k: 2203	n:3560000
Cons ci ratio: 2.291839e-04	ci left: 9.878641e-01	ci right 9.880908e-01	k: 3517201	n:3560000
KS ci ratio: 1.540971e-01	ci left: 1.677366e-04	ci right 1.960082e-04	k: 646	n:3560000
PRG4   3560000 perm   5908 sec   (603 perm/sec)   p_kst 1.814607e-04   p_cons 9.879778e-01   p_joint 6.188202e-04

Joint ci ratio: 8.334069e-02	ci left: 5.935122e-04	ci right 6.453986e-04	k: 2210	n:3570000
Cons ci ratio: 2.288864e-04	ci left: 9.878617e-01	ci right 9.880882e-01	k: 3527072	n:3570000
KS ci ratio: 1.538595e-01	ci left: 1.678054e-04	ci right 1.960410e-04	k: 648	n:3570000
PRG4   3570000 perm   5939 sec   (601 perm/sec)   p_kst 1.815126e-04   p_cons 9.879754e-01   p_joint 6.190476e-04

Joint ci ratio: 8.362509e-02	ci left: 5.877518e-04	ci right 6.393185e-04	k: 2195	n:3580000
Cons ci ratio: 2.285712e-04	ci left: 9.878614e-01	ci right 9.880875e-01	k: 3536950	n:3580000
KS ci ratio: 1.538595e-01	ci left: 1.673367e-04	ci right 1.954934e-04	k: 648	n:3580000
PRG4   3580000 perm   5970 sec   (600 perm/sec)   p_kst 1.810056e-04   p_cons 9.879749e-01   p_joint 6.131285e-04

Joint ci ratio: 8.349212e-02	ci left: 5.880237e-04	ci right 6.395283e-04	k: 2202	n:3590000
Cons ci ratio: 2.282466e-04	ci left: 9.878622e-01	ci right 9.880880e-01	k: 3546832	n:3590000
KS ci ratio: 1.536230e-01	ci left: 1.674062e-04	ci right 1.955273e-04	k: 650	n:3590000
PRG4   3590000 perm   6000 sec   (598 perm/sec)   p_kst 1.810585e-04   p_cons 9.879755e-01   p_joint 6.133705e-04

Joint ci ratio: 8.341644e-02	ci left: 5.874782e-04	ci right 6.388861e-04	k: 2206	n:3600000
Cons ci ratio: 2.279047e-04	ci left: 9.878649e-01	ci right 9.880904e-01	k: 3556721	n:3600000
KS ci ratio: 1.532702e-01	ci left: 1.677425e-04	ci right 1.958495e-04	k: 653	n:3600000
PRG4   3600000 perm   6031 sec   (597 perm/sec)   p_kst 1.813889e-04   p_cons 9.879781e-01   p_joint 6.127778e-04

Joint ci ratio: 8.328446e-02	ci left: 5.877495e-04	ci right 6.390958e-04	k: 2213	n:3610000
Cons ci ratio: 2.276440e-04	ci left: 9.878593e-01	ci right 9.880845e-01	k: 3566580	n:3610000
KS ci ratio: 1.532702e-01	ci left: 1.672779e-04	ci right 1.953070e-04	k: 653	n:3610000
PRG4   3610000 perm   6061 sec   (596 perm/sec)   p_kst 1.808864e-04   p_cons 9.879723e-01   p_joint 6.130194e-04

Joint ci ratio: 8.319059e-02	ci left: 5.874783e-04	ci right 6.387403e-04	k: 2218	n:3620000
Cons ci ratio: 2.273101e-04	ci left: 9.878615e-01	ci right 9.880863e-01	k: 3576467	n:3620000
KS ci ratio: 1.530364e-01	ci left: 1.673471e-04	ci right 1.953411e-04	k: 655	n:3620000
PRG4   3620000 perm   6093 sec   (594 perm/sec)   p_kst 1.809392e-04   p_cons 9.879743e-01   p_joint 6.127072e-04

Joint ci ratio: 8.424185e-02	ci left: 5.710254e-04	ci right 6.215123e-04	k: 2163	n:3630000
Cons ci ratio: 2.270014e-04	ci left: 9.878612e-01	ci right 9.880857e-01	k: 3586345	n:3630000
KS ci ratio: 1.529199e-01	ci left: 1.671510e-04	ci right 1.950890e-04	k: 656	n:3630000
PRG4   3630000 perm   6125 sec   (593 perm/sec)   p_kst 1.807163e-04   p_cons 9.879738e-01   p_joint 5.958678e-04

Joint ci ratio: 7.662917e-02	ci left: 6.908727e-04	ci right 7.461902e-04	k: 2614	n:3640000
Cons ci ratio: 2.267463e-04	ci left: 9.878553e-01	ci right 9.880796e-01	k: 3596203	n:3640000
KS ci ratio: 1.528037e-01	ci left: 1.669560e-04	ci right 1.948383e-04	k: 657	n:3640000
PRG4   3640000 perm   6156 sec   (591 perm/sec)   p_kst 1.804945e-04   p_cons 9.879679e-01   p_joint 7.181319e-04

Joint ci ratio: 7.655604e-02	ci left: 6.903236e-04	ci right 7.455420e-04	k: 2619	n:3650000
Cons ci ratio: 2.264190e-04	ci left: 9.878572e-01	ci right 9.880812e-01	k: 3606089	n:3650000
KS ci ratio: 1.524565e-01	ci left: 1.672892e-04	ci right 1.951577e-04	k: 660	n:3650000
PRG4   3650000 perm   6187 sec   (590 perm/sec)   p_kst 1.808219e-04   p_cons 9.879696e-01   p_joint 7.175342e-04

Joint ci ratio: 7.679111e-02	ci left: 6.841496e-04	ci right 7.390497e-04	k: 2603	n:3660000
Cons ci ratio: 2.260567e-04	ci left: 9.878629e-01	ci right 9.880866e-01	k: 3615989	n:3660000
KS ci ratio: 1.523413e-01	ci left: 1.670949e-04	ci right 1.949082e-04	k: 661	n:3660000
PRG4   3660000 perm   6218 sec   (589 perm/sec)   p_kst 1.806011e-04   p_cons 9.879751e-01   p_joint 7.112022e-04

Joint ci ratio: 7.671752e-02	ci left: 6.836217e-04	ci right 7.384245e-04	k: 2608	n:3670000
Cons ci ratio: 2.257608e-04	ci left: 9.878618e-01	ci right 9.880851e-01	k: 3625864	n:3670000
KS ci ratio: 1.522264e-01	ci left: 1.669017e-04	ci right 1.946599e-04	k: 662	n:3670000
PRG4   3670000 perm   6249 sec   (587 perm/sec)   p_kst 1.803815e-04   p_cons 9.879738e-01   p_joint 7.106267e-04

Joint ci ratio: 7.690958e-02	ci left: 6.782992e-04	ci right 7.328175e-04	k: 2595	n:3680000
Cons ci ratio: 2.254299e-04	ci left: 9.878645e-01	ci right 9.880875e-01	k: 3635753	n:3680000
KS ci ratio: 1.521118e-01	ci left: 1.667095e-04	ci right 1.944130e-04	k: 663	n:3680000
PRG4   3680000 perm   6281 sec   (586 perm/sec)   p_kst 1.801630e-04   p_cons 9.879764e-01   p_joint 7.051630e-04

Joint ci ratio: 7.680610e-02	ci left: 6.783215e-04	ci right 7.327650e-04	k: 2602	n:3690000
Cons ci ratio: 2.251185e-04	ci left: 9.878652e-01	ci right 9.880879e-01	k: 3645635	n:3690000
KS ci ratio: 1.519974e-01	ci left: 1.665184e-04	ci right 1.941675e-04	k: 664	n:3690000
PRG4   3690000 perm   6312 sec   (585 perm/sec)   p_kst 1.799458e-04   p_cons 9.879770e-01   p_joint 7.051491e-04

Joint ci ratio: 7.662961e-02	ci left: 6.796693e-04	ci right 7.340900e-04	k: 2614	n:3700000
Cons ci ratio: 2.247981e-04	ci left: 9.878671e-01	ci right 9.880894e-01	k: 3655521	n:3700000
KS ci ratio: 1.518832e-01	ci left: 1.663284e-04	ci right 1.939233e-04	k: 665	n:3700000
PRG4   3700000 perm   6343 sec   (583 perm/sec)   p_kst 1.797297e-04   p_cons 9.879786e-01   p_joint 7.064865e-04

Joint ci ratio: 7.655648e-02	ci left: 6.791592e-04	ci right 7.334849e-04	k: 2619	n:3710000
Cons ci ratio: 2.244842e-04	ci left: 9.878684e-01	ci right 9.880904e-01	k: 3665405	n:3710000
KS ci ratio: 1.517693e-01	ci left: 1.661394e-04	ci right 1.936803e-04	k: 666	n:3710000
PRG4   3710000 perm   6374 sec   (582 perm/sec)   p_kst 1.795148e-04   p_cons 9.879798e-01   p_joint 7.059299e-04

Joint ci ratio: 7.645442e-02	ci left: 6.791792e-04	ci right 7.334308e-04	k: 2626	n:3720000
Cons ci ratio: 2.241894e-04	ci left: 9.878678e-01	ci right 9.880895e-01	k: 3675282	n:3720000
KS ci ratio: 1.515423e-01	ci left: 1.662100e-04	ci right 1.937177e-04	k: 668	n:3720000
PRG4   3720000 perm   6406 sec   (581 perm/sec)   p_kst 1.795699e-04   p_cons 9.879790e-01   p_joint 7.059140e-04

Joint ci ratio: 7.641084e-02	ci left: 6.781472e-04	ci right 7.322842e-04	k: 2629	n:3730000
Cons ci ratio: 2.238704e-04	ci left: 9.878699e-01	ci right 9.880913e-01	k: 3685169	n:3730000
KS ci ratio: 1.515423e-01	ci left: 1.657644e-04	ci right 1.931984e-04	k: 668	n:3730000
PRG4   3730000 perm   6437 sec   (579 perm/sec)   p_kst 1.790885e-04   p_cons 9.879810e-01   p_joint 7.048257e-04

Joint ci ratio: 7.731340e-02	ci left: 6.603371e-04	ci right 7.137029e-04	k: 2568	n:3740000
Cons ci ratio: 2.235856e-04	ci left: 9.878685e-01	ci right 9.880896e-01	k: 3695043	n:3740000
KS ci ratio: 1.513163e-01	ci left: 1.658356e-04	ci right 1.932368e-04	k: 670	n:3740000
PRG4   3740000 perm   6469 sec   (578 perm/sec)   p_kst 1.791444e-04   p_cons 9.879794e-01   p_joint 6.866310e-04

Joint ci ratio: 7.720828e-02	ci left: 6.604068e-04	ci right 7.137024e-04	k: 2575	n:3750000
Cons ci ratio: 2.232817e-04	ci left: 9.878692e-01	ci right 9.880901e-01	k: 3704925	n:3750000
KS ci ratio: 1.512037e-01	ci left: 1.656500e-04	ci right 1.929982e-04	k: 671	n:3750000
PRG4   3750000 perm   6501 sec   (577 perm/sec)   p_kst 1.789333e-04   p_cons 9.879800e-01   p_joint 6.866667e-04

Joint ci ratio: 7.696952e-02	ci left: 6.628237e-04	ci right 7.161416e-04	k: 2591	n:3760000
Cons ci ratio: 2.229766e-04	ci left: 9.878702e-01	ci right 9.880908e-01	k: 3714808	n:3760000
KS ci ratio: 1.507557e-01	ci left: 1.662331e-04	ci right 1.935889e-04	k: 675	n:3760000
PRG4   3760000 perm   6533 sec   (575 perm/sec)   p_kst 1.795213e-04   p_cons 9.879809e-01   p_joint 6.890957e-04

Joint ci ratio: 7.685100e-02	ci left: 6.631468e-04	ci right 7.164048e-04	k: 2599	n:3770000
Cons ci ratio: 2.227200e-04	ci left: 9.878661e-01	ci right 9.880864e-01	k: 3724672	n:3770000
KS ci ratio: 1.504222e-01	ci left: 1.665579e-04	ci right 1.939011e-04	k: 678	n:3770000
PRG4   3770000 perm   6566 sec   (574 perm/sec)   p_kst 1.798408e-04   p_cons 9.879767e-01   p_joint 6.893899e-04

Joint ci ratio: 7.691030e-02	ci left: 6.603545e-04	ci right 7.134311e-04	k: 2595	n:3780000
Cons ci ratio: 2.223998e-04	ci left: 9.878690e-01	ci right 9.880890e-01	k: 3734562	n:3780000
KS ci ratio: 1.504223e-01	ci left: 1.661173e-04	ci right 1.933882e-04	k: 678	n:3780000
PRG4   3780000 perm   6598 sec   (573 perm/sec)   p_kst 1.793651e-04   p_cons 9.879794e-01   p_joint 6.865079e-04

Joint ci ratio: 7.676256e-02	ci left: 6.612000e-04	ci right 7.142379e-04	k: 2605	n:3790000
Cons ci ratio: 2.221107e-04	ci left: 9.878687e-01	ci right 9.880884e-01	k: 3744440	n:3790000
KS ci ratio: 1.499811e-01	ci left: 1.666947e-04	ci right 1.939730e-04	k: 682	n:3790000
PRG4   3790000 perm   6630 sec   (572 perm/sec)   p_kst 1.799472e-04   p_cons 9.879789e-01   p_joint 6.873351e-04

Joint ci ratio: 7.663033e-02	ci left: 6.617830e-04	ci right 7.147721e-04	k: 2614	n:3800000
Cons ci ratio: 2.218177e-04	ci left: 9.878689e-01	ci right 9.880883e-01	k: 3754320	n:3800000
KS ci ratio: 1.498714e-01	ci left: 1.665093e-04	ci right 1.937355e-04	k: 683	n:3800000
PRG4   3800000 perm   6662 sec   (570 perm/sec)   p_kst 1.797368e-04   p_cons 9.879789e-01   p_joint 6.878947e-04

Joint ci ratio: 7.652797e-02	ci left: 6.618481e-04	ci right 7.147685e-04	k: 2621	n:3810000
Cons ci ratio: 2.215332e-04	ci left: 9.878683e-01	ci right 9.880874e-01	k: 3764197	n:3810000
KS ci ratio: 1.496528e-01	ci left: 1.665776e-04	ci right 1.937716e-04	k: 685	n:3810000
PRG4   3810000 perm   6694 sec   (569 perm/sec)   p_kst 1.797900e-04   p_cons 9.879782e-01   p_joint 6.879265e-04

Joint ci ratio: 7.642602e-02	ci left: 6.619129e-04	ci right 7.147649e-04	k: 2628	n:3820000
Cons ci ratio: 2.212962e-04	ci left: 9.878627e-01	ci right 9.880816e-01	k: 3774055	n:3820000
KS ci ratio: 1.493266e-01	ci left: 1.668975e-04	ci right 1.940791e-04	k: 688	n:3820000
PRG4   3820000 perm   6726 sec   (568 perm/sec)   p_kst 1.801047e-04   p_cons 9.879725e-01   p_joint 6.879581e-04

Joint ci ratio: 7.636797e-02	ci left: 6.612091e-04	ci right 7.139630e-04	k: 2632	n:3830000
Cons ci ratio: 2.209894e-04	ci left: 9.878647e-01	ci right 9.880833e-01	k: 3783942	n:3830000
KS ci ratio: 1.492184e-01	ci left: 1.667131e-04	ci right 1.938432e-04	k: 689	n:3830000
PRG4   3830000 perm   6759 sec   (567 perm/sec)   p_kst 1.798956e-04   p_cons 9.879744e-01   p_joint 6.872063e-04

Joint ci ratio: 7.622333e-02	ci left: 6.620417e-04	ci right 7.147576e-04	k: 2642	n:3840000
Cons ci ratio: 2.207057e-04	ci left: 9.878644e-01	ci right 9.880827e-01	k: 3793820	n:3840000
KS ci ratio: 1.486806e-01	ci left: 1.675325e-04	ci right 1.946889e-04	k: 694	n:3840000
PRG4   3840000 perm   6791 sec   (565 perm/sec)   p_kst 1.807292e-04   p_cons 9.879740e-01   p_joint 6.880208e-04

Joint ci ratio: 7.618015e-02	ci left: 6.610865e-04	ci right 7.136951e-04	k: 2645	n:3850000
Cons ci ratio: 2.204616e-04	ci left: 9.878600e-01	ci right 9.880780e-01	k: 3803682	n:3850000
KS ci ratio: 1.484671e-01	ci left: 1.675975e-04	ci right 1.947220e-04	k: 696	n:3850000
PRG4   3850000 perm   6824 sec   (564 perm/sec)   p_kst 1.807792e-04   p_cons 9.879694e-01   p_joint 6.870130e-04

Joint ci ratio: 7.606523e-02	ci left: 6.614069e-04	ci right 7.139582e-04	k: 2653	n:3860000
Cons ci ratio: 2.201823e-04	ci left: 9.878594e-01	ci right 9.880772e-01	k: 3813559	n:3860000
KS ci ratio: 1.482546e-01	ci left: 1.676622e-04	ci right 1.947549e-04	k: 698	n:3860000
PRG4   3860000 perm   6857 sec   (563 perm/sec)   p_kst 1.808290e-04   p_cons 9.879687e-01   p_joint 6.873057e-04

Joint ci ratio: 7.592230e-02	ci left: 6.622328e-04	ci right 7.147464e-04	k: 2663	n:3870000
Cons ci ratio: 2.199256e-04	ci left: 9.878565e-01	ci right 9.880740e-01	k: 3823427	n:3870000
KS ci ratio: 1.479374e-01	ci left: 1.679754e-04	ci right 1.950556e-04	k: 701	n:3870000
PRG4   3870000 perm   6890 sec   (562 perm/sec)   p_kst 1.811370e-04   p_cons 9.879656e-01   p_joint 6.881137e-04

Joint ci ratio: 7.579436e-02	ci left: 6.628016e-04	ci right 7.152678e-04	k: 2672	n:3880000
Cons ci ratio: 2.196126e-04	ci left: 9.878598e-01	ci right 9.880771e-01	k: 3833319	n:3880000
KS ci ratio: 1.476223e-01	ci left: 1.682871e-04	ci right 1.953546e-04	k: 704	n:3880000
PRG4   3880000 perm   6923 sec   (560 perm/sec)   p_kst 1.814433e-04   p_cons 9.879688e-01   p_joint 6.886598e-04

Joint ci ratio: 7.632488e-02	ci left: 6.517669e-04	ci right 7.037368e-04	k: 2635	n:3890000
Cons ci ratio: 2.193626e-04	ci left: 9.878564e-01	ci right 9.880734e-01	k: 3843185	n:3890000
KS ci ratio: 1.476223e-01	ci left: 1.678545e-04	ci right 1.948524e-04	k: 704	n:3890000
PRG4   3890000 perm   6957 sec   (559 perm/sec)   p_kst 1.809769e-04   p_cons 9.879653e-01   p_joint 6.773779e-04

Joint ci ratio: 7.622373e-02	ci left: 6.518564e-04	ci right 7.037614e-04	k: 2642	n:3900000
Cons ci ratio: 2.190922e-04	ci left: 9.878554e-01	ci right 9.880721e-01	k: 3853060	n:3900000
KS ci ratio: 1.476224e-01	ci left: 1.674241e-04	ci right 1.943528e-04	k: 704	n:3900000
PRG4   3900000 perm   6990 sec   (558 perm/sec)   p_kst 1.805128e-04   p_cons 9.879641e-01   p_joint 6.774359e-04

Joint ci ratio: 7.620937e-02	ci left: 6.504401e-04	ci right 7.022222e-04	k: 2643	n:3910000
Cons ci ratio: 2.187545e-04	ci left: 9.878618e-01	ci right 9.880782e-01	k: 3862964	n:3910000
KS ci ratio: 1.476224e-01	ci left: 1.669959e-04	ci right 1.938558e-04	k: 704	n:3910000
PRG4   3910000 perm   7024 sec   (557 perm/sec)   p_kst 1.800512e-04   p_cons 9.879703e-01   p_joint 6.759591e-04

Joint ci ratio: 7.613744e-02	ci left: 6.500320e-04	ci right 7.017306e-04	k: 2648	n:3920000
Cons ci ratio: 2.184769e-04	ci left: 9.878617e-01	ci right 9.880778e-01	k: 3872843	n:3920000
KS ci ratio: 1.474135e-01	ci left: 1.670613e-04	ci right 1.938902e-04	k: 706	n:3920000
PRG4   3920000 perm   7057 sec   (555 perm/sec)   p_kst 1.801020e-04   p_cons 9.879702e-01   p_joint 6.755102e-04

Joint ci ratio: 7.748085e-02	ci left: 6.256671e-04	ci right 6.763455e-04	k: 2557	n:3930000
Cons ci ratio: 2.181794e-04	ci left: 9.878640e-01	ci right 9.880798e-01	k: 3882731	n:3930000
KS ci ratio: 1.471017e-01	ci left: 1.673714e-04	ci right 1.941883e-04	k: 709	n:3930000
PRG4   3930000 perm   7090 sec   (554 perm/sec)   p_kst 1.804071e-04   p_cons 9.879723e-01   p_joint 6.506361e-04

Joint ci ratio: 7.734488e-02	ci left: 6.263192e-04	ci right 6.769574e-04	k: 2566	n:3940000
Cons ci ratio: 2.178831e-04	ci left: 9.878663e-01	ci right 9.880818e-01	k: 3892619	n:3940000
KS ci ratio: 1.466890e-01	ci left: 1.679245e-04	ci right 1.947480e-04	k: 713	n:3940000
PRG4   3940000 perm   7123 sec   (553 perm/sec)   p_kst 1.809645e-04   p_cons 9.879744e-01   p_joint 6.512690e-04

Joint ci ratio: 7.725465e-02	ci left: 6.262232e-04	ci right 6.767919e-04	k: 2572	n:3950000
Cons ci ratio: 2.176366e-04	ci left: 9.878631e-01	ci right 9.880784e-01	k: 3902486	n:3950000
KS ci ratio: 1.466890e-01	ci left: 1.674994e-04	ci right 1.942550e-04	k: 713	n:3950000
PRG4   3950000 perm   7156 sec   (552 perm/sec)   p_kst 1.805063e-04   p_cons 9.879711e-01   p_joint 6.511392e-04

Joint ci ratio: 7.809442e-02	ci left: 6.110225e-04	ci right 6.609245e-04	k: 2517	n:3960000
Cons ci ratio: 2.173518e-04	ci left: 9.878644e-01	ci right 9.880794e-01	k: 3912370	n:3960000
KS ci ratio: 1.463818e-01	ci left: 1.678062e-04	ci right 1.945498e-04	k: 716	n:3960000
PRG4   3960000 perm   7190 sec   (551 perm/sec)   p_kst 1.808081e-04   p_cons 9.879722e-01   p_joint 6.356061e-04

Joint ci ratio: 7.861164e-02	ci left: 6.013338e-04	ci right 6.507846e-04	k: 2484	n:3970000
Cons ci ratio: 2.170611e-04	ci left: 9.878664e-01	ci right 9.880810e-01	k: 3922257	n:3970000
KS ci ratio: 1.462799e-01	ci left: 1.676262e-04	ci right 1.943208e-04	k: 717	n:3970000
PRG4   3970000 perm   7223 sec   (550 perm/sec)   p_kst 1.806045e-04   p_cons 9.879741e-01   p_joint 6.256927e-04

Joint ci ratio: 7.850114e-02	ci left: 6.015472e-04	ci right 6.509428e-04	k: 2491	n:3980000
Cons ci ratio: 2.167807e-04	ci left: 9.878673e-01	ci right 9.880817e-01	k: 3932140	n:3980000
KS ci ratio: 1.459752e-01	ci left: 1.679312e-04	ci right 1.946139e-04	k: 720	n:3980000
PRG4   3980000 perm   7257 sec   (548 perm/sec)   p_kst 1.809045e-04   p_cons 9.879749e-01   p_joint 6.258794e-04

Joint ci ratio: 7.839111e-02	ci left: 6.017595e-04	ci right 6.511002e-04	k: 2498	n:3990000
Cons ci ratio: 2.165312e-04	ci left: 9.878650e-01	ci right 9.880792e-01	k: 3942010	n:3990000
KS ci ratio: 1.455719e-01	ci left: 1.684763e-04	ci right 1.951652e-04	k: 724	n:3990000
PRG4   3990000 perm   7290 sec   (547 perm/sec)   p_kst 1.814536e-04   p_cons 9.879724e-01   p_joint 6.260652e-04

Joint ci ratio: 7.845403e-02	ci left: 5.992747e-04	ci right 6.484529e-04	k: 2494	n:4000000
Cons ci ratio: 2.162688e-04	ci left: 9.878642e-01	ci right 9.880781e-01	k: 3951886	n:4000000
KS ci ratio: 1.454716e-01	ci left: 1.682960e-04	ci right 1.949363e-04	k: 725	n:4000000
PRG4   4000000 perm   7323 sec   (546 perm/sec)   p_kst 1.812500e-04   p_cons 9.879715e-01   p_joint 6.235000e-04

Joint ci ratio: 7.831288e-02	ci left: 5.999807e-04	ci right 6.491241e-04	k: 2503	n:4010000
Cons ci ratio: 2.160006e-04	ci left: 9.878641e-01	ci right 9.880778e-01	k: 3961765	n:4010000
KS ci ratio: 1.452717e-01	ci left: 1.683569e-04	ci right 1.949671e-04	k: 727	n:4010000
PRG4   4010000 perm   7357 sec   (545 perm/sec)   p_kst 1.812968e-04   p_cons 9.879713e-01   p_joint 6.241895e-04

Joint ci ratio: 7.821923e-02	ci left: 5.999515e-04	ci right 6.490311e-04	k: 2509	n:4020000
Cons ci ratio: 2.157672e-04	ci left: 9.878604e-01	ci right 9.880738e-01	k: 3971629	n:4020000
KS ci ratio: 1.450725e-01	ci left: 1.684176e-04	ci right 1.949977e-04	k: 729	n:4020000
PRG4   4020000 perm   7391 sec   (544 perm/sec)   p_kst 1.813433e-04   p_cons 9.879674e-01   p_joint 6.241294e-04

Joint ci ratio: 7.814145e-02	ci left: 5.996792e-04	ci right 6.486856e-04	k: 2514	n:4030000
Cons ci ratio: 2.155076e-04	ci left: 9.878596e-01	ci right 9.880727e-01	k: 3981505	n:4030000
KS ci ratio: 1.446766e-01	ci left: 1.689563e-04	ci right 1.955423e-04	k: 733	n:4030000
PRG4   4030000 perm   7425 sec   (543 perm/sec)   p_kst 1.818859e-04   p_cons 9.879665e-01   p_joint 6.238213e-04

Joint ci ratio: 7.811044e-02	ci left: 5.986802e-04	ci right 6.475847e-04	k: 2516	n:4040000
Cons ci ratio: 2.152557e-04	ci left: 9.878580e-01	ci right 9.880710e-01	k: 3991378	n:4040000
KS ci ratio: 1.446767e-01	ci left: 1.685380e-04	ci right 1.950583e-04	k: 733	n:4040000
PRG4   4040000 perm   7459 sec   (542 perm/sec)   p_kst 1.814356e-04   p_cons 9.879649e-01   p_joint 6.227723e-04

Joint ci ratio: 7.806396e-02	ci left: 5.979283e-04	ci right 6.467409e-04	k: 2519	n:4050000
Cons ci ratio: 2.150046e-04	ci left: 9.878565e-01	ci right 9.880692e-01	k: 4001251	n:4050000
KS ci ratio: 1.446767e-01	ci left: 1.681219e-04	ci right 1.945767e-04	k: 733	n:4050000
PRG4   4050000 perm   7493 sec   (541 perm/sec)   p_kst 1.809877e-04   p_cons 9.879632e-01   p_joint 6.219753e-04

Joint ci ratio: 7.792491e-02	ci left: 5.986291e-04	ci right 6.474079e-04	k: 2528	n:4060000
Cons ci ratio: 2.147522e-04	ci left: 9.878553e-01	ci right 9.880677e-01	k: 4011125	n:4060000
KS ci ratio: 1.443819e-01	ci left: 1.684200e-04	ci right 1.948630e-04	k: 736	n:4060000
PRG4   4060000 perm   7527 sec   (539 perm/sec)   p_kst 1.812808e-04   p_cons 9.879618e-01   p_joint 6.226601e-04

Joint ci ratio: 7.778659e-02	ci left: 5.993265e-04	ci right 6.480716e-04	k: 2537	n:4070000
Cons ci ratio: 2.144452e-04	ci left: 9.878602e-01	ci right 9.880723e-01	k: 4021024	n:4070000
KS ci ratio: 1.441864e-01	ci left: 1.684799e-04	ci right 1.948934e-04	k: 738	n:4070000
PRG4   4070000 perm   7561 sec   (538 perm/sec)   p_kst 1.813268e-04   p_cons 9.879666e-01   p_joint 6.233415e-04

Joint ci ratio: 7.767954e-02	ci left: 5.995399e-04	ci right 6.482322e-04	k: 2544	n:4080000
Cons ci ratio: 2.141617e-04	ci left: 9.878626e-01	ci right 9.880744e-01	k: 4030913	n:4080000
KS ci ratio: 1.438946e-01	ci left: 1.687757e-04	ci right 1.951775e-04	k: 741	n:4080000
PRG4   4080000 perm   7596 sec   (537 perm/sec)   p_kst 1.816176e-04   p_cons 9.879689e-01   p_joint 6.235294e-04

Joint ci ratio: 7.757292e-02	ci left: 5.997523e-04	ci right 6.483920e-04	k: 2551	n:4090000
Cons ci ratio: 2.138968e-04	ci left: 9.878631e-01	ci right 9.880746e-01	k: 4040794	n:4090000
KS ci ratio: 1.437011e-01	ci left: 1.688345e-04	ci right 1.952069e-04	k: 743	n:4090000
PRG4   4090000 perm   7630 sec   (536 perm/sec)   p_kst 1.816626e-04   p_cons 9.879692e-01   p_joint 6.237164e-04

Joint ci ratio: 7.751222e-02	ci left: 5.992462e-04	ci right 6.478050e-04	k: 2555	n:4100000
Cons ci ratio: 2.136373e-04	ci left: 9.878630e-01	ci right 9.880743e-01	k: 4050673	n:4100000
KS ci ratio: 1.435083e-01	ci left: 1.688930e-04	ci right 1.952361e-04	k: 745	n:4100000
PRG4   4100000 perm   7665 sec   (535 perm/sec)   p_kst 1.817073e-04   p_cons 9.879690e-01   p_joint 6.231707e-04

Joint ci ratio: 7.740629e-02	ci left: 5.994583e-04	ci right 6.479650e-04	k: 2562	n:4110000
Cons ci ratio: 2.133766e-04	ci left: 9.878632e-01	ci right 9.880743e-01	k: 4060553	n:4110000
KS ci ratio: 1.433163e-01	ci left: 1.689512e-04	ci right 1.952651e-04	k: 747	n:4110000
PRG4   4110000 perm   7700 sec   (534 perm/sec)   p_kst 1.817518e-04   p_cons 9.879691e-01   p_joint 6.233577e-04

Joint ci ratio: 7.769505e-02	ci left: 5.934810e-04	ci right 6.416913e-04	k: 2543	n:4120000
Cons ci ratio: 2.131298e-04	ci left: 9.878620e-01	ci right 9.880728e-01	k: 4070427	n:4120000
KS ci ratio: 1.432206e-01	ci left: 1.687751e-04	ci right 1.950426e-04	k: 748	n:4120000
PRG4   4120000 perm   7734 sec   (533 perm/sec)   p_kst 1.815534e-04   p_cons 9.879677e-01   p_joint 6.172330e-04

Joint ci ratio: 7.784835e-02	ci left: 5.896698e-04	ci right 6.376692e-04	k: 2533	n:4130000
Cons ci ratio: 2.128709e-04	ci left: 9.878622e-01	ci right 9.880727e-01	k: 4080307	n:4130000
KS ci ratio: 1.431251e-01	ci left: 1.685999e-04	ci right 1.948211e-04	k: 749	n:4130000
PRG4   4130000 perm   7769 sec   (532 perm/sec)   p_kst 1.813559e-04   p_cons 9.879678e-01   p_joint 6.133172e-04

Joint ci ratio: 7.778700e-02	ci left: 5.891928e-04	ci right 6.371140e-04	k: 2537	n:4140000
Cons ci ratio: 2.126087e-04	ci left: 9.878629e-01	ci right 9.880732e-01	k: 4090189	n:4140000
KS ci ratio: 1.429347e-01	ci left: 1.686585e-04	ci right 1.948509e-04	k: 751	n:4140000
PRG4   4140000 perm   7805 sec   (530 perm/sec)   p_kst 1.814010e-04   p_cons 9.879684e-01   p_joint 6.128019e-04

Joint ci ratio: 7.771051e-02	ci left: 5.889545e-04	ci right 6.368070e-04	k: 2542	n:4150000
Cons ci ratio: 2.123797e-04	ci left: 9.878599e-01	ci right 9.880700e-01	k: 4100056	n:4150000
KS ci ratio: 1.427450e-01	ci left: 1.687168e-04	ci right 1.948805e-04	k: 753	n:4150000
PRG4   4150000 perm   7840 sec   (529 perm/sec)   p_kst 1.814458e-04   p_cons 9.879653e-01   p_joint 6.125301e-04

Joint ci ratio: 7.761899e-02	ci left: 5.889530e-04	ci right 6.367465e-04	k: 2548	n:4160000
Cons ci ratio: 2.121707e-04	ci left: 9.878548e-01	ci right 9.880647e-01	k: 4109914	n:4160000
KS ci ratio: 1.425560e-01	ci left: 1.687748e-04	ci right 1.949100e-04	k: 755	n:4160000
PRG4   4160000 perm   7875 sec   (528 perm/sec)   p_kst 1.814904e-04   p_cons 9.879601e-01   p_joint 6.125000e-04

Joint ci ratio: 7.758860e-02	ci left: 5.880110e-04	ci right 6.357085e-04	k: 2550	n:4170000
Cons ci ratio: 2.119494e-04	ci left: 9.878512e-01	ci right 9.880608e-01	k: 4119778	n:4170000
KS ci ratio: 1.425561e-01	ci left: 1.683701e-04	ci right 1.944426e-04	k: 755	n:4170000
PRG4   4170000 perm   7910 sec   (527 perm/sec)   p_kst 1.810552e-04   p_cons 9.879564e-01   p_joint 6.115108e-04

Joint ci ratio: 7.743693e-02	ci left: 5.889502e-04	ci right 6.366263e-04	k: 2560	n:4180000
Cons ci ratio: 2.116799e-04	ci left: 9.878531e-01	ci right 9.880625e-01	k: 4129665	n:4180000
KS ci ratio: 1.422740e-01	ci left: 1.686594e-04	ci right 1.947206e-04	k: 758	n:4180000
PRG4   4180000 perm   7946 sec   (526 perm/sec)   p_kst 1.813397e-04   p_cons 9.879581e-01   p_joint 6.124402e-04

Joint ci ratio: 7.740675e-02	ci left: 5.880127e-04	ci right 6.355935e-04	k: 2562	n:4190000
Cons ci ratio: 2.114475e-04	ci left: 9.878509e-01	ci right 9.880601e-01	k: 4139535	n:4190000
KS ci ratio: 1.422741e-01	ci left: 1.682569e-04	ci right 1.942559e-04	k: 758	n:4190000
PRG4   4190000 perm   7981 sec   (525 perm/sec)   p_kst 1.809069e-04   p_cons 9.879558e-01   p_joint 6.114558e-04

Joint ci ratio: 7.751280e-02	ci left: 5.849782e-04	ci right 6.323813e-04	k: 2555	n:4200000
Cons ci ratio: 2.111926e-04	ci left: 9.878514e-01	ci right 9.880603e-01	k: 4149416	n:4200000
KS ci ratio: 1.422741e-01	ci left: 1.678563e-04	ci right 1.937934e-04	k: 758	n:4200000
PRG4   4200000 perm   8017 sec   (524 perm/sec)   p_kst 1.804762e-04   p_cons 9.879562e-01   p_joint 6.083333e-04

Joint ci ratio: 7.743710e-02	ci left: 5.847534e-04	ci right 6.320899e-04	k: 2560	n:4210000
Cons ci ratio: 2.109259e-04	ci left: 9.878533e-01	ci right 9.880619e-01	k: 4159303	n:4210000
KS ci ratio: 1.421805e-01	ci left: 1.676866e-04	ci right 1.935791e-04	k: 759	n:4210000
PRG4   4210000 perm   8053 sec   (523 perm/sec)   p_kst 1.802850e-04   p_cons 9.879580e-01   p_joint 6.080760e-04

Joint ci ratio: 7.740692e-02	ci left: 5.838325e-04	ci right 6.310751e-04	k: 2562	n:4220000
Cons ci ratio: 2.107085e-04	ci left: 9.878497e-01	ci right 9.880581e-01	k: 4169167	n:4220000
KS ci ratio: 1.419938e-01	ci left: 1.677464e-04	ci right 1.936111e-04	k: 761	n:4220000
PRG4   4220000 perm   8089 sec   (522 perm/sec)   p_kst 1.803318e-04   p_cons 9.879543e-01   p_joint 6.071090e-04

Joint ci ratio: 7.734661e-02	ci left: 5.833796e-04	ci right 6.305472e-04	k: 2566	n:4230000
Cons ci ratio: 2.104605e-04	ci left: 9.878497e-01	ci right 9.880579e-01	k: 4179046	n:4230000
KS ci ratio: 1.418078e-01	ci left: 1.678058e-04	ci right 1.936430e-04	k: 763	n:4230000
PRG4   4230000 perm   8125 sec   (521 perm/sec)   p_kst 1.803783e-04   p_cons 9.879541e-01   p_joint 6.066194e-04

Joint ci ratio: 7.721135e-02	ci left: 5.840853e-04	ci right 6.312237e-04	k: 2575	n:4240000
Cons ci ratio: 2.102132e-04	ci left: 9.878497e-01	ci right 9.880576e-01	k: 4188925	n:4240000
KS ci ratio: 1.415302e-01	ci left: 1.680925e-04	ci right 1.939189e-04	k: 766	n:4240000
PRG4   4240000 perm   8161 sec   (520 perm/sec)   p_kst 1.806604e-04   p_cons 9.879540e-01   p_joint 6.073113e-04

Joint ci ratio: 7.713653e-02	ci left: 5.838647e-04	ci right 6.309376e-04	k: 2580	n:4250000
Cons ci ratio: 2.099524e-04	ci left: 9.878514e-01	ci right 9.880590e-01	k: 4198811	n:4250000
KS ci ratio: 1.415302e-01	ci left: 1.676970e-04	ci right 1.934626e-04	k: 766	n:4250000
PRG4   4250000 perm   8197 sec   (518 perm/sec)   p_kst 1.802353e-04   p_cons 9.879555e-01   p_joint 6.070588e-04

Joint ci ratio: 7.791064e-02	ci left: 5.707543e-04	ci right 6.172528e-04	k: 2529	n:4260000
Cons ci ratio: 2.097214e-04	ci left: 9.878497e-01	ci right 9.880571e-01	k: 4208683	n:4260000
KS ci ratio: 1.412542e-01	ci left: 1.679827e-04	ci right 1.937376e-04	k: 769	n:4260000
PRG4   4260000 perm   8234 sec   (517 perm/sec)   p_kst 1.805164e-04   p_cons 9.879538e-01   p_joint 5.936620e-04

Joint ci ratio: 7.778773e-02	ci left: 5.712547e-04	ci right 6.177173e-04	k: 2537	n:4270000
Cons ci ratio: 2.094871e-04	ci left: 9.878485e-01	ci right 9.880557e-01	k: 4218557	n:4270000
KS ci ratio: 1.410711e-01	ci left: 1.680411e-04	ci right 1.937688e-04	k: 771	n:4270000
PRG4   4270000 perm   8270 sec   (516 perm/sec)   p_kst 1.805621e-04   p_cons 9.879525e-01   p_joint 5.941452e-04

Joint ci ratio: 7.772652e-02	ci left: 5.708364e-04	ci right 6.172268e-04	k: 2541	n:4280000
Cons ci ratio: 2.092392e-04	ci left: 9.878490e-01	ci right 9.880559e-01	k: 4228438	n:4280000
KS ci ratio: 1.409799e-01	ci left: 1.678739e-04	ci right 1.935580e-04	k: 772	n:4280000
PRG4   4280000 perm   8307 sec   (515 perm/sec)   p_kst 1.803738e-04   p_cons 9.879528e-01   p_joint 5.936916e-04

Joint ci ratio: 7.754365e-02	ci left: 5.722487e-04	ci right 6.186395e-04	k: 2553	n:4290000
Cons ci ratio: 2.089983e-04	ci left: 9.878488e-01	ci right 9.880555e-01	k: 4238316	n:4290000
KS ci ratio: 1.403457e-01	ci left: 1.690569e-04	ci right 1.947959e-04	k: 779	n:4290000
PRG4   4290000 perm   8343 sec   (514 perm/sec)   p_kst 1.815851e-04   p_cons 9.879524e-01   p_joint 5.951049e-04

Joint ci ratio: 7.737716e-02	ci left: 5.734265e-04	ci right 6.198085e-04	k: 2564	n:4300000
Cons ci ratio: 2.087216e-04	ci left: 9.878527e-01	ci right 9.880592e-01	k: 4248212	n:4300000
KS ci ratio: 1.400766e-01	ci left: 1.693369e-04	ci right 1.950650e-04	k: 782	n:4300000
PRG4   4300000 perm   8380 sec   (513 perm/sec)   p_kst 1.818605e-04   p_cons 9.879563e-01   p_joint 5.962791e-04

Joint ci ratio: 7.728681e-02	ci left: 5.734612e-04	ci right 6.197894e-04	k: 2570	n:4310000
Cons ci ratio: 2.085068e-04	ci left: 9.878497e-01	ci right 9.880559e-01	k: 4258078	n:4310000
KS ci ratio: 1.397201e-01	ci left: 1.698396e-04	ci right 1.955729e-04	k: 786	n:4310000
PRG4   4310000 perm   8416 sec   (512 perm/sec)   p_kst 1.823666e-04   p_cons 9.879531e-01   p_joint 5.962877e-04

Joint ci ratio: 7.203851e-02	ci left: 6.602748e-04	ci right 7.098428e-04	k: 2958	n:4320000
Cons ci ratio: 2.082928e-04	ci left: 9.878467e-01	ci right 9.880527e-01	k: 4267944	n:4320000
KS ci ratio: 1.395429e-01	ci left: 1.698933e-04	ci right 1.955993e-04	k: 788	n:4320000
PRG4   4320000 perm   8453 sec   (511 perm/sec)   p_kst 1.824074e-04   p_cons 9.879500e-01   p_joint 6.847222e-04

Joint ci ratio: 7.194132e-02	ci left: 6.605643e-04	ci right 7.100843e-04	k: 2966	n:4330000
Cons ci ratio: 2.080632e-04	ci left: 9.878455e-01	ci right 9.880513e-01	k: 4277818	n:4330000
KS ci ratio: 1.393664e-01	ci left: 1.699467e-04	ci right 1.956256e-04	k: 790	n:4330000
PRG4   4330000 perm   8490 sec   (510 perm/sec)   p_kst 1.824480e-04   p_cons 9.879487e-01   p_joint 6.849885e-04

Joint ci ratio: 7.256819e-02	ci left: 6.475032e-04	ci right 6.964849e-04	k: 2915	n:4340000
Cons ci ratio: 2.078485e-04	ci left: 9.878427e-01	ci right 9.880483e-01	k: 4287685	n:4340000
KS ci ratio: 1.390153e-01	ci left: 1.704447e-04	ci right 1.961286e-04	k: 794	n:4340000
PRG4   4340000 perm   8527 sec   (509 perm/sec)   p_kst 1.829493e-04   p_cons 9.879459e-01   p_joint 6.716590e-04

Joint ci ratio: 7.240692e-02	ci left: 6.489491e-04	ci right 6.979264e-04	k: 2928	n:4350000
Cons ci ratio: 2.076083e-04	ci left: 9.878430e-01	ci right 9.880483e-01	k: 4297565	n:4350000
KS ci ratio: 1.386669e-01	ci left: 1.709404e-04	ci right 1.966292e-04	k: 798	n:4350000
PRG4   4350000 perm   8564 sec   (508 perm/sec)   p_kst 1.834483e-04   p_cons 9.879460e-01   p_joint 6.731034e-04

Joint ci ratio: 7.230823e-02	ci left: 6.492623e-04	ci right 6.981937e-04	k: 2936	n:4360000
Cons ci ratio: 2.073531e-04	ci left: 9.878451e-01	ci right 9.880502e-01	k: 4307453	n:4360000
KS ci ratio: 1.384073e-01	ci left: 1.712126e-04	ci right 1.968901e-04	k: 801	n:4360000
PRG4   4360000 perm   8602 sec   (507 perm/sec)   p_kst 1.837156e-04   p_cons 9.879479e-01   p_joint 6.733945e-04

Joint ci ratio: 7.220994e-02	ci left: 6.495742e-04	ci right 6.984598e-04	k: 2944	n:4370000
Cons ci ratio: 2.070788e-04	ci left: 9.878494e-01	ci right 9.880543e-01	k: 4317351	n:4370000
KS ci ratio: 1.384073e-01	ci left: 1.708208e-04	ci right 1.964395e-04	k: 801	n:4370000
PRG4   4370000 perm   8638 sec   (506 perm/sec)   p_kst 1.832952e-04   p_cons 9.879522e-01   p_joint 6.736842e-04

Joint ci ratio: 7.217322e-02	ci left: 6.487637e-04	ci right 6.975624e-04	k: 2947	n:4380000
Cons ci ratio: 2.068929e-04	ci left: 9.878437e-01	ci right 9.880483e-01	k: 4327205	n:4380000
KS ci ratio: 1.383211e-01	ci left: 1.706512e-04	ci right 1.962273e-04	k: 802	n:4380000
PRG4   4380000 perm   8675 sec   (505 perm/sec)   p_kst 1.831050e-04   p_cons 9.879463e-01   p_joint 6.728311e-04

Joint ci ratio: 7.211211e-02	ci left: 6.484043e-04	ci right 6.971329e-04	k: 2952	n:4390000
Cons ci ratio: 2.066541e-04	ci left: 9.878442e-01	ci right 9.880486e-01	k: 4337086	n:4390000
KS ci ratio: 1.381492e-01	ci left: 1.707023e-04	ci right 1.962516e-04	k: 804	n:4390000
PRG4   4390000 perm   8712 sec   (504 perm/sec)   p_kst 1.831435e-04   p_cons 9.879467e-01   p_joint 6.724374e-04

Joint ci ratio: 7.202679e-02	ci left: 6.484929e-04	ci right 6.971681e-04	k: 2959	n:4400000
Cons ci ratio: 2.063964e-04	ci left: 9.878469e-01	ci right 9.880511e-01	k: 4346977	n:4400000
KS ci ratio: 1.378072e-01	ci left: 1.711921e-04	ci right 1.967460e-04	k: 808	n:4400000
PRG4   4400000 perm   8749 sec   (503 perm/sec)   p_kst 1.836364e-04   p_cons 9.879493e-01   p_joint 6.725000e-04

Joint ci ratio: 7.223471e-02	ci left: 6.432370e-04	ci right 6.916629e-04	k: 2942	n:4410000
Cons ci ratio: 2.061691e-04	ci left: 9.878463e-01	ci right 9.880502e-01	k: 4356853	n:4410000
KS ci ratio: 1.376371e-01	ci left: 1.712418e-04	ci right 1.967690e-04	k: 810	n:4410000
PRG4   4410000 perm   8786 sec   (502 perm/sec)   p_kst 1.836735e-04   p_cons 9.879485e-01   p_joint 6.671202e-04

Joint ci ratio: 7.222249e-02	ci left: 6.420038e-04	ci right 6.903284e-04	k: 2943	n:4420000
Cons ci ratio: 2.059308e-04	ci left: 9.878469e-01	ci right 9.880506e-01	k: 4366735	n:4420000
KS ci ratio: 1.376372e-01	ci left: 1.708543e-04	ci right 1.963238e-04	k: 810	n:4420000
PRG4   4420000 perm   8823 sec   (501 perm/sec)   p_kst 1.832579e-04   p_cons 9.879491e-01   p_joint 6.658371e-04

Joint ci ratio: 7.217349e-02	ci left: 6.414412e-04	ci right 6.896893e-04	k: 2947	n:4430000
Cons ci ratio: 2.057031e-04	ci left: 9.878465e-01	ci right 9.880499e-01	k: 4376612	n:4430000
KS ci ratio: 1.375524e-01	ci left: 1.706866e-04	ci right 1.961142e-04	k: 811	n:4430000
PRG4   4430000 perm   8861 sec   (500 perm/sec)   p_kst 1.830700e-04   p_cons 9.879485e-01   p_joint 6.652370e-04

Joint ci ratio: 7.228404e-02	ci left: 6.380061e-04	ci right 6.860724e-04	k: 2938	n:4440000
Cons ci ratio: 2.054703e-04	ci left: 9.878467e-01	ci right 9.880499e-01	k: 4386492	n:4440000
KS ci ratio: 1.374678e-01	ci left: 1.705197e-04	ci right 1.959054e-04	k: 812	n:4440000
PRG4   4440000 perm   8897 sec   (499 perm/sec)   p_kst 1.828829e-04   p_cons 9.879486e-01   p_joint 6.617117e-04

Joint ci ratio: 7.227180e-02	ci left: 6.367930e-04	ci right 6.847595e-04	k: 2939	n:4450000
Cons ci ratio: 2.052132e-04	ci left: 9.878499e-01	ci right 9.880528e-01	k: 4396385	n:4450000
KS ci ratio: 1.374678e-01	ci left: 1.701365e-04	ci right 1.954652e-04	k: 812	n:4450000
PRG4   4450000 perm   8934 sec   (498 perm/sec)   p_kst 1.824719e-04   p_cons 9.879517e-01   p_joint 6.604494e-04

Joint ci ratio: 7.217366e-02	ci left: 6.371266e-04	ci right 6.850502e-04	k: 2947	n:4460000
Cons ci ratio: 2.049917e-04	ci left: 9.878490e-01	ci right 9.880517e-01	k: 4406260	n:4460000
KS ci ratio: 1.372990e-01	ci left: 1.701880e-04	ci right 1.954908e-04	k: 814	n:4460000
PRG4   4460000 perm   8973 sec   (497 perm/sec)   p_kst 1.825112e-04   p_cons 9.879507e-01   p_joint 6.607623e-04

Joint ci ratio: 7.206372e-02	ci left: 6.376783e-04	ci right 6.855674e-04	k: 2956	n:4470000
Cons ci ratio: 2.047767e-04	ci left: 9.878474e-01	ci right 9.880499e-01	k: 4416132	n:4470000
KS ci ratio: 1.367964e-01	ci left: 1.711036e-04	ci right 1.964417e-04	k: 820	n:4470000
PRG4   4470000 perm   9011 sec   (496 perm/sec)   p_kst 1.834452e-04   p_cons 9.879490e-01   p_joint 6.612975e-04

Joint ci ratio: 7.196642e-02	ci left: 6.380085e-04	ci right 6.858550e-04	k: 2964	n:4480000
Cons ci ratio: 2.045643e-04	ci left: 9.878456e-01	ci right 9.880479e-01	k: 4426003	n:4480000
KS ci ratio: 1.367131e-01	ci left: 1.709372e-04	ci right 1.962341e-04	k: 821	n:4480000
PRG4   4480000 perm   9050 sec   (495 perm/sec)   p_kst 1.832589e-04   p_cons 9.879471e-01   p_joint 6.616071e-04

Joint ci ratio: 7.184534e-02	ci left: 6.387747e-04	ci right 6.865947e-04	k: 2974	n:4490000
Cons ci ratio: 2.043659e-04	ci left: 9.878423e-01	ci right 9.880444e-01	k: 4435867	n:4490000
KS ci ratio: 1.366301e-01	ci left: 1.707716e-04	ci right 1.960273e-04	k: 822	n:4490000
PRG4   4490000 perm   9089 sec   (494 perm/sec)   p_kst 1.830735e-04   p_cons 9.879437e-01   p_joint 6.623608e-04

Joint ci ratio: 7.178506e-02	ci left: 6.384463e-04	ci right 6.862000e-04	k: 2979	n:4500000
Cons ci ratio: 2.041281e-04	ci left: 9.878436e-01	ci right 9.880455e-01	k: 4445752	n:4500000
KS ci ratio: 1.365472e-01	ci left: 1.706067e-04	ci right 1.958215e-04	k: 823	n:4500000
PRG4   4500000 perm   9128 sec   (493 perm/sec)   p_kst 1.828889e-04   p_cons 9.879449e-01   p_joint 6.620000e-04

Joint ci ratio: 7.162894e-02	ci left: 6.398615e-04	ci right 6.876126e-04	k: 2992	n:4510000
Cons ci ratio: 2.039329e-04	ci left: 9.878401e-01	ci right 9.880418e-01	k: 4455615	n:4510000
KS ci ratio: 1.360527e-01	ci left: 1.715135e-04	ci right 1.967631e-04	k: 829	n:4510000
PRG4   4510000 perm   9168 sec   (492 perm/sec)   p_kst 1.838137e-04   p_cons 9.879412e-01   p_joint 6.634146e-04

Joint ci ratio: 7.158114e-02	ci left: 6.393150e-04	ci right 6.869921e-04	k: 2996	n:4520000
Cons ci ratio: 2.037099e-04	ci left: 9.878399e-01	ci right 9.880414e-01	k: 4465493	n:4520000
KS ci ratio: 1.359708e-01	ci left: 1.713477e-04	ci right 1.965565e-04	k: 830	n:4520000
PRG4   4520000 perm   9207 sec   (491 perm/sec)   p_kst 1.836283e-04   p_cons 9.879409e-01   p_joint 6.628319e-04

Joint ci ratio: 7.150960e-02	ci left: 6.392045e-04	ci right 6.868238e-04	k: 3002	n:4530000
Cons ci ratio: 2.034894e-04	ci left: 9.878395e-01	ci right 9.880407e-01	k: 4475370	n:4530000
KS ci ratio: 1.359708e-01	ci left: 1.709695e-04	ci right 1.961226e-04	k: 830	n:4530000
PRG4   4530000 perm   9247 sec   (490 perm/sec)   p_kst 1.832230e-04   p_cons 9.879404e-01   p_joint 6.626932e-04

Joint ci ratio: 7.146204e-02	ci left: 6.386619e-04	ci right 6.862078e-04	k: 3006	n:4540000
Cons ci ratio: 2.032678e-04	ci left: 9.878393e-01	ci right 9.880403e-01	k: 4485248	n:4540000
KS ci ratio: 1.357260e-01	ci left: 1.712312e-04	ci right 1.963739e-04	k: 833	n:4540000
PRG4   4540000 perm   9287 sec   (489 perm/sec)   p_kst 1.834802e-04   p_cons 9.879401e-01   p_joint 6.621145e-04

Joint ci ratio: 7.135532e-02	ci left: 6.392010e-04	ci right 6.867129e-04	k: 3015	n:4550000
Cons ci ratio: 2.030189e-04	ci left: 9.878424e-01	ci right 9.880432e-01	k: 4495141	n:4550000
KS ci ratio: 1.355636e-01	ci left: 1.712795e-04	ci right 1.963967e-04	k: 835	n:4550000
PRG4   4550000 perm   9325 sec   (488 perm/sec)   p_kst 1.835165e-04   p_cons 9.879431e-01   p_joint 6.626374e-04

Joint ci ratio: 7.124908e-02	ci left: 6.397377e-04	ci right 6.872159e-04	k: 3024	n:4560000
Cons ci ratio: 2.027409e-04	ci left: 9.878490e-01	ci right 9.880495e-01	k: 4505050	n:4560000
KS ci ratio: 1.354017e-01	ci left: 1.713276e-04	ci right 1.964195e-04	k: 837	n:4560000
PRG4   4560000 perm   9364 sec   (487 perm/sec)   p_kst 1.835526e-04   p_cons 9.879496e-01   p_joint 6.631579e-04

Joint ci ratio: 7.119028e-02	ci left: 6.394124e-04	ci right 6.868257e-04	k: 3029	n:4570000
Cons ci ratio: 2.024976e-04	ci left: 9.878516e-01	ci right 9.880519e-01	k: 4514941	n:4570000
KS ci ratio: 1.353210e-01	ci left: 1.711642e-04	ci right 1.962159e-04	k: 838	n:4570000
PRG4   4570000 perm   9404 sec   (486 perm/sec)   p_kst 1.833698e-04   p_cons 9.879521e-01   p_joint 6.628009e-04

Joint ci ratio: 6.870521e-02	ci left: 6.858555e-04	ci right 7.348666e-04	k: 3252	n:4580000
Cons ci ratio: 2.022551e-04	ci left: 9.878543e-01	ci right 9.880543e-01	k: 4524832	n:4580000
KS ci ratio: 1.349995e-01	ci left: 1.716343e-04	ci right 1.966904e-04	k: 842	n:4580000
PRG4   4580000 perm   9443 sec   (485 perm/sec)   p_kst 1.838428e-04   p_cons 9.879546e-01   p_joint 7.100437e-04

Joint ci ratio: 6.858932e-02	ci left: 6.867167e-04	ci right 7.357032e-04	k: 3263	n:4590000
Cons ci ratio: 2.020486e-04	ci left: 9.878527e-01	ci right 9.880525e-01	k: 4534704	n:4590000
KS ci ratio: 1.346009e-01	ci left: 1.723129e-04	ci right 1.973879e-04	k: 847	n:4590000
PRG4   4590000 perm   9482 sec   (484 perm/sec)   p_kst 1.845316e-04   p_cons 9.879529e-01   p_joint 7.108932e-04

Joint ci ratio: 6.850541e-02	ci left: 6.869331e-04	ci right 7.358728e-04	k: 3271	n:4600000
Cons ci ratio: 2.018575e-04	ci left: 9.878494e-01	ci right 9.880491e-01	k: 4544568	n:4600000
KS ci ratio: 1.345216e-01	ci left: 1.721484e-04	ci right 1.971835e-04	k: 848	n:4600000
PRG4   4600000 perm   9521 sec   (483 perm/sec)   p_kst 1.843478e-04   p_cons 9.879496e-01   p_joint 7.110870e-04

Joint ci ratio: 6.845314e-02	ci left: 6.865091e-04	ci right 7.353797e-04	k: 3276	n:4610000
Cons ci ratio: 2.016155e-04	ci left: 9.878523e-01	ci right 9.880517e-01	k: 4554460	n:4610000
KS ci ratio: 1.343635e-01	ci left: 1.721942e-04	ci right 1.972042e-04	k: 850	n:4610000
PRG4   4610000 perm   9560 sec   (482 perm/sec)   p_kst 1.843818e-04   p_cons 9.879523e-01   p_joint 7.106291e-04

Joint ci ratio: 6.319127e-02	ci left: 8.059481e-04	ci right 8.587500e-04	k: 3844	n:4620000
Cons ci ratio: 2.014127e-04	ci left: 9.878505e-01	ci right 9.880497e-01	k: 4564331	n:4620000
KS ci ratio: 1.341272e-01	ci left: 1.724491e-04	ci right 1.974485e-04	k: 853	n:4620000
PRG4   4620000 perm   9600 sec   (481 perm/sec)   p_kst 1.846320e-04   p_cons 9.879504e-01   p_joint 8.320346e-04

Joint ci ratio: 6.345615e-02	ci left: 7.974053e-04	ci right 8.498745e-04	k: 3812	n:4630000
Cons ci ratio: 2.011796e-04	ci left: 9.878525e-01	ci right 9.880514e-01	k: 4574219	n:4630000
KS ci ratio: 1.340488e-01	ci left: 1.722853e-04	ci right 1.972452e-04	k: 854	n:4630000
PRG4   4630000 perm   9640 sec   (480 perm/sec)   p_kst 1.844492e-04   p_cons 9.879523e-01   p_joint 8.233261e-04

Joint ci ratio: 6.333994e-02	ci left: 7.986562e-04	ci right 8.511079e-04	k: 3826	n:4640000
Cons ci ratio: 2.009564e-04	ci left: 9.878533e-01	ci right 9.880521e-01	k: 4584102	n:4640000
KS ci ratio: 1.339705e-01	ci left: 1.721223e-04	ci right 1.970429e-04	k: 855	n:4640000
PRG4   4640000 perm   9678 sec   (479 perm/sec)   p_kst 1.842672e-04   p_cons 9.879530e-01   p_joint 8.245690e-04

Joint ci ratio: 6.357317e-02	ci left: 7.910126e-04	ci right 8.431606e-04	k: 3798	n:4650000
Cons ci ratio: 2.007357e-04	ci left: 9.878540e-01	ci right 9.880525e-01	k: 4593984	n:4650000
KS ci ratio: 1.338923e-01	ci left: 1.719600e-04	ci right 1.968414e-04	k: 856	n:4650000
PRG4   4650000 perm   9719 sec   (478 perm/sec)   p_kst 1.840860e-04   p_cons 9.879535e-01   p_joint 8.167742e-04

Joint ci ratio: 6.352305e-02	ci left: 7.905822e-04	ci right 8.426593e-04	k: 3804	n:4660000
Cons ci ratio: 2.005103e-04	ci left: 9.878553e-01	ci right 9.880536e-01	k: 4603869	n:4660000
KS ci ratio: 1.338143e-01	ci left: 1.717984e-04	ci right 1.966408e-04	k: 857	n:4660000
PRG4   4660000 perm   9759 sec   (477 perm/sec)   p_kst 1.839056e-04   p_cons 9.879547e-01   p_joint 8.163090e-04

Joint ci ratio: 6.347304e-02	ci left: 7.901537e-04	ci right 8.421601e-04	k: 3810	n:4670000
Cons ci ratio: 2.002821e-04	ci left: 9.878570e-01	ci right 9.880551e-01	k: 4613756	n:4670000
KS ci ratio: 1.336586e-01	ci left: 1.718445e-04	ci right 1.966623e-04	k: 859	n:4670000
PRG4   4670000 perm   9799 sec   (477 perm/sec)   p_kst 1.839400e-04   p_cons 9.879563e-01   p_joint 8.158458e-04

Joint ci ratio: 6.340652e-02	ci left: 7.901476e-04	ci right 8.420971e-04	k: 3818	n:4680000
Cons ci ratio: 2.000600e-04	ci left: 9.878580e-01	ci right 9.880559e-01	k: 4623640	n:4680000
KS ci ratio: 1.335809e-01	ci left: 1.716838e-04	ci right 1.964629e-04	k: 860	n:4680000
PRG4   4680000 perm   9839 sec   (476 perm/sec)   p_kst 1.837607e-04   p_cons 9.879573e-01   p_joint 8.158120e-04

Joint ci ratio: 6.344816e-02	ci left: 7.874137e-04	ci right 8.392186e-04	k: 3813	n:4690000
Cons ci ratio: 1.998351e-04	ci left: 9.878595e-01	ci right 9.880572e-01	k: 4633526	n:4690000
KS ci ratio: 1.335034e-01	ci left: 1.715239e-04	ci right 1.962643e-04	k: 861	n:4690000
PRG4   4690000 perm   9879 sec   (475 perm/sec)   p_kst 1.835821e-04   p_cons 9.879586e-01   p_joint 8.130064e-04

Joint ci ratio: 6.339002e-02	ci left: 7.872040e-04	ci right 8.389460e-04	k: 3820	n:4700000
Cons ci ratio: 1.996127e-04	ci left: 9.878608e-01	ci right 9.880582e-01	k: 4643411	n:4700000
KS ci ratio: 1.332717e-01	ci left: 1.717759e-04	ci right 1.965063e-04	k: 864	n:4700000
PRG4   4700000 perm   9919 sec   (474 perm/sec)   p_kst 1.838298e-04   p_cons 9.879598e-01   p_joint 8.127660e-04

Joint ci ratio: 6.402202e-02	ci left: 7.698626e-04	ci right 8.209879e-04	k: 3745	n:4710000
Cons ci ratio: 1.994302e-04	ci left: 9.878573e-01	ci right 9.880546e-01	k: 4653274	n:4710000
KS ci ratio: 1.332717e-01	ci left: 1.714112e-04	ci right 1.960891e-04	k: 864	n:4710000
PRG4   4710000 perm   9959 sec   (473 perm/sec)   p_kst 1.834395e-04   p_cons 9.879563e-01   p_joint 7.951168e-04

Joint ci ratio: 6.403918e-02	ci left: 7.678145e-04	ci right 8.188180e-04	k: 3743	n:4720000
Cons ci ratio: 1.992234e-04	ci left: 9.878569e-01	ci right 9.880539e-01	k: 4663151	n:4720000
KS ci ratio: 1.331179e-01	ci left: 1.714577e-04	ci right 1.961115e-04	k: 866	n:4720000
PRG4   4720000 perm   9999 sec   (472 perm/sec)   p_kst 1.834746e-04   p_cons 9.879557e-01   p_joint 7.930085e-04

Joint ci ratio: 6.395382e-02	ci left: 7.682716e-04	ci right 8.192349e-04	k: 3753	n:4730000
Cons ci ratio: 1.990455e-04	ci left: 9.878531e-01	ci right 9.880499e-01	k: 4673012	n:4730000
KS ci ratio: 1.330412e-01	ci left: 1.712995e-04	ci right 1.959153e-04	k: 867	n:4730000
PRG4   4730000 perm   10040 sec   (471 perm/sec)   p_kst 1.832981e-04   p_cons 9.879518e-01   p_joint 7.934461e-04

Joint ci ratio: 6.385182e-02	ci left: 7.691420e-04	ci right 8.200786e-04	k: 3765	n:4740000
Cons ci ratio: 1.988170e-04	ci left: 9.878554e-01	ci right 9.880520e-01	k: 4682902	n:4740000
KS ci ratio: 1.327357e-01	ci left: 1.717540e-04	ci right 1.963739e-04	k: 871	n:4740000
PRG4   4740000 perm   10081 sec   (470 perm/sec)   p_kst 1.837553e-04   p_cons 9.879540e-01   p_joint 7.943038e-04

Joint ci ratio: 6.379257e-02	ci left: 7.689729e-04	ci right 8.198494e-04	k: 3772	n:4750000
Cons ci ratio: 1.985874e-04	ci left: 9.878579e-01	ci right 9.880543e-01	k: 4692793	n:4750000
KS ci ratio: 1.325838e-01	ci left: 1.717995e-04	ci right 1.963955e-04	k: 873	n:4750000
PRG4   4750000 perm   10121 sec   (469 perm/sec)   p_kst 1.837895e-04   p_cons 9.879564e-01   p_joint 7.941053e-04

Joint ci ratio: 6.371661e-02	ci left: 7.692180e-04	ci right 8.200479e-04	k: 3781	n:4760000
Cons ci ratio: 1.983622e-04	ci left: 9.878600e-01	ci right 9.880562e-01	k: 4702682	n:4760000
KS ci ratio: 1.322814e-01	ci left: 1.722510e-04	ci right 1.968511e-04	k: 877	n:4760000
PRG4   4760000 perm   10162 sec   (468 perm/sec)   p_kst 1.842437e-04   p_cons 9.879584e-01   p_joint 7.943277e-04

Joint ci ratio: 6.364933e-02	ci left: 7.692558e-04	ci right 8.200326e-04	k: 3789	n:4770000
Cons ci ratio: 1.981499e-04	ci left: 9.878606e-01	ci right 9.880566e-01	k: 4712564	n:4770000
KS ci ratio: 1.321310e-01	ci left: 1.722954e-04	ci right 1.968715e-04	k: 879	n:4770000
PRG4   4770000 perm   10204 sec   (467 perm/sec)   p_kst 1.842767e-04   p_cons 9.879589e-01   p_joint 7.943396e-04

Joint ci ratio: 6.429783e-02	ci left: 7.520010e-04	ci right 8.021634e-04	k: 3713	n:4780000
Cons ci ratio: 1.979297e-04	ci left: 9.878623e-01	ci right 9.880580e-01	k: 4722451	n:4780000
KS ci ratio: 1.319063e-01	ci left: 1.725418e-04	ci right 1.971080e-04	k: 882	n:4780000
PRG4   4780000 perm   10244 sec   (467 perm/sec)   p_kst 1.845188e-04   p_cons 9.879605e-01   p_joint 7.767782e-04

Joint ci ratio: 6.421142e-02	ci left: 7.524852e-04	ci right 8.026099e-04	k: 3723	n:4790000
Cons ci ratio: 1.976980e-04	ci left: 9.878654e-01	ci right 9.880609e-01	k: 4732345	n:4790000
KS ci ratio: 1.316828e-01	ci left: 1.727872e-04	ci right 1.973435e-04	k: 885	n:4790000
PRG4   4790000 perm   10284 sec   (466 perm/sec)   p_kst 1.847599e-04   p_cons 9.879635e-01   p_joint 7.772443e-04

Joint ci ratio: 6.414256e-02	ci left: 7.525575e-04	ci right 8.026312e-04	k: 3731	n:4800000
Cons ci ratio: 1.974930e-04	ci left: 9.878654e-01	ci right 9.880607e-01	k: 4742224	n:4800000
KS ci ratio: 1.316085e-01	ci left: 1.726287e-04	ci right 1.971475e-04	k: 886	n:4800000
PRG4   4800000 perm   10325 sec   (465 perm/sec)   p_kst 1.845833e-04   p_cons 9.879633e-01   p_joint 7.772917e-04

Joint ci ratio: 6.409107e-02	ci left: 7.522203e-04	ci right 8.022300e-04	k: 3737	n:4810000
Cons ci ratio: 1.972921e-04	ci left: 9.878649e-01	ci right 9.880601e-01	k: 4752101	n:4810000
KS ci ratio: 1.315344e-01	ci left: 1.724709e-04	ci right 1.969524e-04	k: 887	n:4810000
PRG4   4810000 perm   10365 sec   (464 perm/sec)   p_kst 1.844075e-04   p_cons 9.879628e-01   p_joint 7.769231e-04

Joint ci ratio: 6.403115e-02	ci left: 7.520887e-04	ci right 8.020411e-04	k: 3744	n:4820000
Cons ci ratio: 1.970971e-04	ci left: 9.878639e-01	ci right 9.880588e-01	k: 4761975	n:4820000
KS ci ratio: 1.313128e-01	ci left: 1.727150e-04	ci right 1.971866e-04	k: 890	n:4820000
PRG4   4820000 perm   10407 sec   (463 perm/sec)   p_kst 1.846473e-04   p_cons 9.879616e-01   p_joint 7.767635e-04

Joint ci ratio: 6.420300e-02	ci left: 7.464571e-04	ci right 7.961735e-04	k: 3724	n:4830000
Cons ci ratio: 1.968957e-04	ci left: 9.878636e-01	ci right 9.880584e-01	k: 4771853	n:4830000
KS ci ratio: 1.311657e-01	ci left: 1.727579e-04	ci right 1.972060e-04	k: 892	n:4830000
PRG4   4830000 perm   10449 sec   (462 perm/sec)   p_kst 1.846791e-04   p_cons 9.879613e-01   p_joint 7.710145e-04

Joint ci ratio: 6.415998e-02	ci left: 7.459313e-04	ci right 7.955781e-04	k: 3729	n:4840000
Cons ci ratio: 1.967137e-04	ci left: 9.878611e-01	ci right 9.880557e-01	k: 4781720	n:4840000
KS ci ratio: 1.311657e-01	ci left: 1.724010e-04	ci right 1.967986e-04	k: 892	n:4840000
PRG4   4840000 perm   10490 sec   (461 perm/sec)   p_kst 1.842975e-04   p_cons 9.879587e-01   p_joint 7.704545e-04

Joint ci ratio: 6.410845e-02	ci left: 7.456106e-04	ci right 7.951947e-04	k: 3735	n:4850000
Cons ci ratio: 1.965510e-04	ci left: 9.878563e-01	ci right 9.880507e-01	k: 4791576	n:4850000
KS ci ratio: 1.310923e-01	ci left: 1.722449e-04	ci right 1.966058e-04	k: 893	n:4850000
PRG4   4850000 perm   10530 sec   (461 perm/sec)   p_kst 1.841237e-04   p_cons 9.879538e-01   p_joint 7.701031e-04

Joint ci ratio: 6.403136e-02	ci left: 7.458986e-04	ci right 7.954400e-04	k: 3744	n:4860000
Cons ci ratio: 1.963818e-04	ci left: 9.878524e-01	ci right 9.880466e-01	k: 4801436	n:4860000
KS ci ratio: 1.310923e-01	ci left: 1.718905e-04	ci right 1.962012e-04	k: 893	n:4860000
PRG4   4860000 perm   10571 sec   (460 perm/sec)   p_kst 1.837449e-04   p_cons 9.879498e-01   p_joint 7.703704e-04

Joint ci ratio: 6.396308e-02	ci left: 7.459834e-04	ci right 7.954757e-04	k: 3752	n:4870000
Cons ci ratio: 1.961911e-04	ci left: 9.878512e-01	ci right 9.880452e-01	k: 4811309	n:4870000
KS ci ratio: 1.310191e-01	ci left: 1.717362e-04	ci right 1.960104e-04	k: 894	n:4870000
PRG4   4870000 perm   10612 sec   (459 perm/sec)   p_kst 1.835729e-04   p_cons 9.879485e-01   p_joint 7.704312e-04

Joint ci ratio: 6.387801e-02	ci left: 7.464712e-04	ci right 7.959275e-04	k: 3762	n:4880000
Cons ci ratio: 1.959958e-04	ci left: 9.878505e-01	ci right 9.880444e-01	k: 4821185	n:4880000
KS ci ratio: 1.308000e-01	ci left: 1.719789e-04	ci right 1.962436e-04	k: 897	n:4880000
PRG4   4880000 perm   10653 sec   (458 perm/sec)   p_kst 1.838115e-04   p_cons 9.879477e-01   p_joint 7.709016e-04

Joint ci ratio: 6.381869e-02	ci left: 7.463533e-04	ci right 7.957542e-04	k: 3769	n:4890000
Cons ci ratio: 1.958012e-04	ci left: 9.878499e-01	ci right 9.880436e-01	k: 4831061	n:4890000
KS ci ratio: 1.308001e-01	ci left: 1.716272e-04	ci right 1.958423e-04	k: 897	n:4890000
PRG4   4890000 perm   10694 sec   (457 perm/sec)   p_kst 1.834356e-04   p_cons 9.879470e-01   p_joint 7.707566e-04

Joint ci ratio: 6.378488e-02	ci left: 7.456334e-04	ci right 7.949596e-04	k: 3773	n:4900000
Cons ci ratio: 1.956037e-04	ci left: 9.878497e-01	ci right 9.880432e-01	k: 4840939	n:4900000
KS ci ratio: 1.307273e-01	ci left: 1.714743e-04	ci right 1.956534e-04	k: 898	n:4900000
PRG4   4900000 perm   10735 sec   (456 perm/sec)   p_kst 1.832653e-04   p_cons 9.879467e-01   p_joint 7.700000e-04

Joint ci ratio: 6.371738e-02	ci left: 7.457182e-04	ci right 7.949958e-04	k: 3781	n:4910000
Cons ci ratio: 1.954119e-04	ci left: 9.878489e-01	ci right 9.880422e-01	k: 4850814	n:4910000
KS ci ratio: 1.306547e-01	ci left: 1.713221e-04	ci right 1.954652e-04	k: 899	n:4910000
PRG4   4910000 perm   10777 sec   (456 perm/sec)   p_kst 1.830957e-04   p_cons 9.879458e-01   p_joint 7.700611e-04

Joint ci ratio: 6.366691e-02	ci left: 7.454026e-04	ci right 7.946189e-04	k: 3787	n:4920000
Cons ci ratio: 1.952190e-04	ci left: 9.878483e-01	ci right 9.880414e-01	k: 4860690	n:4920000
KS ci ratio: 1.305822e-01	ci left: 1.711705e-04	ci right 1.952778e-04	k: 900	n:4920000
PRG4   4920000 perm   10818 sec   (455 perm/sec)   p_kst 1.829268e-04   p_cons 9.879451e-01   p_joint 7.697154e-04

Joint ci ratio: 6.359140e-02	ci left: 7.456871e-04	ci right 7.948617e-04	k: 3796	n:4930000
Cons ci ratio: 1.950366e-04	ci left: 9.878465e-01	ci right 9.880394e-01	k: 4870560	n:4930000
KS ci ratio: 1.305098e-01	ci left: 1.710195e-04	ci right 1.950912e-04	k: 901	n:4930000
PRG4   4930000 perm   10859 sec   (454 perm/sec)   p_kst 1.827586e-04   p_cons 9.879432e-01   p_joint 7.699797e-04

Joint ci ratio: 6.353287e-02	ci left: 7.455721e-04	ci right 7.946922e-04	k: 3803	n:4940000
Cons ci ratio: 1.948497e-04	ci left: 9.878453e-01	ci right 9.880380e-01	k: 4880433	n:4940000
KS ci ratio: 1.304375e-01	ci left: 1.708691e-04	ci right 1.949053e-04	k: 902	n:4940000
PRG4   4940000 perm   10901 sec   (453 perm/sec)   p_kst 1.825911e-04   p_cons 9.879419e-01   p_joint 7.698381e-04

Joint ci ratio: 6.478935e-02	ci left: 7.150437e-04	ci right 7.631191e-04	k: 3657	n:4950000
Cons ci ratio: 1.946815e-04	ci left: 9.878418e-01	ci right 9.880344e-01	k: 4890295	n:4950000
KS ci ratio: 1.303653e-01	ci left: 1.707194e-04	ci right 1.947202e-04	k: 903	n:4950000
PRG4   4950000 perm   10943 sec   (452 perm/sec)   p_kst 1.824242e-04   p_cons 9.879384e-01   p_joint 7.387879e-04

Joint ci ratio: 6.472745e-02	ci left: 7.149906e-04	ci right 7.630147e-04	k: 3664	n:4960000
Cons ci ratio: 1.944842e-04	ci left: 9.878421e-01	ci right 9.880344e-01	k: 4900175	n:4960000
KS ci ratio: 1.302214e-01	ci left: 1.707652e-04	ci right 1.947440e-04	k: 905	n:4960000
PRG4   4960000 perm   10984 sec   (452 perm/sec)   p_kst 1.824597e-04   p_cons 9.879385e-01   p_joint 7.387097e-04

Joint ci ratio: 6.469218e-02	ci left: 7.143437e-04	ci right 7.622973e-04	k: 3668	n:4970000
Cons ci ratio: 1.942792e-04	ci left: 9.878433e-01	ci right 9.880354e-01	k: 4910060	n:4970000
KS ci ratio: 1.302214e-01	ci left: 1.704217e-04	ci right 1.943521e-04	k: 905	n:4970000
PRG4   4970000 perm   11026 sec   (451 perm/sec)   p_kst 1.820926e-04   p_cons 9.879396e-01   p_joint 7.380282e-04

Joint ci ratio: 6.463936e-02	ci left: 7.140947e-04	ci right 7.619909e-04	k: 3674	n:4980000
Cons ci ratio: 1.940405e-04	ci left: 9.878487e-01	ci right 9.880406e-01	k: 4919966	n:4980000
KS ci ratio: 1.300779e-01	ci left: 1.704680e-04	ci right 1.943765e-04	k: 907	n:4980000
PRG4   4980000 perm   11068 sec   (450 perm/sec)   p_kst 1.821285e-04   p_cons 9.879450e-01   p_joint 7.377510e-04

Joint ci ratio: 6.458667e-02	ci left: 7.138466e-04	ci right 7.616857e-04	k: 3680	n:4990000
Cons ci ratio: 1.938500e-04	ci left: 9.878484e-01	ci right 9.880401e-01	k: 4929843	n:4990000
KS ci ratio: 1.300779e-01	ci left: 1.701264e-04	ci right 1.939870e-04	k: 907	n:4990000
PRG4   4990000 perm   11110 sec   (449 perm/sec)   p_kst 1.817635e-04   p_cons 9.879445e-01   p_joint 7.374749e-04

Joint ci ratio: 6.451659e-02	ci left: 7.139931e-04	ci right 7.617882e-04	k: 3688	n:5000000
Cons ci ratio: 1.936746e-04	ci left: 9.878461e-01	ci right 9.880377e-01	k: 4939711	n:5000000
KS ci ratio: 1.300064e-01	ci left: 1.699796e-04	ci right 1.938055e-04	k: 908	n:5000000
PRG4   5000000 perm   11154 sec   (448 perm/sec)   p_kst 1.816000e-04   p_cons 9.879422e-01   p_joint 7.376000e-04

Outputting figure to mutsig2_images.part000000000137/PRG4.7_4263_5000000_0.0001816_0.98794_0.0007376.png
                gene_name: PRG4
               theta_stop: 0.13 
                    nperm: 5000000 
                     p_ks: 0.00018 
        ci_ks_bounds_left: 0.00017 
       ci_ks_bounds_right: 0.00019 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 0.99 
                  p_joint: 0.00074 
     ci_joint_bounds_left: 0.00071 
    ci_joint_bounds_right: 0.00076 

Current progress: 14 percent done.
PRDM9
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.924317e-02	ci left: 2.953892e-01	ci right 3.135248e-01	k: 3044	n:10000
Cons ci ratio: 7.820875e-03	ci left: 9.578562e-01	ci right 9.654718e-01	k: 9618	n:10000
KS ci ratio: 1.253329e-01	ci left: 8.348941e-02	ci right 9.475129e-02	k: 890	n:10000
PRDM9   10000 perm   2 sec   (5231 perm/sec)   p_kst 8.900000e-02   p_cons 9.618000e-01   p_joint 3.044000e-01

Joint ci ratio: 5.889187e-02	ci left: 1.759822e-01	ci right 1.867106e-01	k: 3626	n:20000
Cons ci ratio: 5.504565e-03	ci left: 9.593605e-01	ci right 9.647041e-01	k: 19242	n:20000
KS ci ratio: 9.059276e-02	ci left: 8.170910e-02	ci right 8.951187e-02	k: 1711	n:20000
PRDM9   20000 perm   4 sec   (4718 perm/sec)   p_kst 8.555000e-02   p_cons 9.621000e-01   p_joint 1.813000e-01

Outputting figure to mutsig2_images.part000000000137/PRDM9.6_2725_20000_0.08555_0.9621_0.1813.png
                gene_name: PRDM9
               theta_stop: 0.091 
                    nperm: 20000 
                     p_ks: 0.086 
        ci_ks_bounds_left: 0.082 
       ci_ks_bounds_right: 0.090 
                   p_cons: 0.96 
      ci_cons_bounds_left: 0.96 
     ci_cons_bounds_right: 0.96 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.19 

Current progress: 29 percent done.
PRKDC
Processing conservation and coverage...
78% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.094953e-01	ci left: 1.073461e-01	ci right 1.198799e-01	k: 1135	n:10000
Cons ci ratio: 2.533769e-02	ci left: 6.962555e-01	ci right 7.142248e-01	k: 7053	n:10000
KS ci ratio: 1.712220e-01	ci left: 4.552219e-02	ci right 5.414247e-02	k: 497	n:10000
PRKDC   10000 perm   3 sec   (3332 perm/sec)   p_kst 4.970000e-02   p_cons 7.053000e-01   p_joint 1.135000e-01

Joint ci ratio: 7.848243e-02	ci left: 1.065308e-01	ci right 1.152827e-01	k: 2217	n:20000
Cons ci ratio: 1.799235e-02	ci left: 6.971664e-01	ci right 7.098744e-01	k: 14071	n:20000
KS ci ratio: 1.208198e-01	ci left: 4.697153e-02	ci right 5.306014e-02	k: 999	n:20000
PRKDC   20000 perm   7 sec   (3073 perm/sec)   p_kst 4.995000e-02   p_cons 7.035500e-01   p_joint 1.108500e-01

Joint ci ratio: 6.019052e-02	ci left: 1.201259e-01	ci right 1.276138e-01	k: 3715	n:30000
Cons ci ratio: 1.475012e-02	ci left: 6.966543e-01	ci right 7.070399e-01	k: 21056	n:30000
KS ci ratio: 9.786246e-02	ci left: 4.827697e-02	ci right 5.327714e-02	k: 1522	n:30000
PRKDC   30000 perm   10 sec   (2963 perm/sec)   p_kst 5.073333e-02   p_cons 7.018667e-01   p_joint 1.238333e-01

Outputting figure to mutsig2_images.part000000000137/PRKDC.4_12730_30000_0.050733_0.70187_0.12383.png
                gene_name: PRKDC
               theta_stop: 0.098 
                    nperm: 30000 
                     p_ks: 0.051 
        ci_ks_bounds_left: 0.048 
       ci_ks_bounds_right: 0.053 
                   p_cons: 0.70 
      ci_cons_bounds_left: 0.70 
     ci_cons_bounds_right: 0.71 
                  p_joint: 0.12 
     ci_joint_bounds_left: 0.12 
    ci_joint_bounds_right: 0.13 

Current progress: 43 percent done.
PRB2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.404485e-02	ci left: 7.177492e-01	ci right 7.353186e-01	k: 7266	n:10000
Cons ci ratio: 3.054934e-02	ci left: 6.125124e-01	ci right 6.316164e-01	k: 6221	n:10000
KS ci ratio: 3.857979e-02	ci left: 4.980503e-01	ci right 5.177451e-01	k: 5079	n:10000
PRB2   10000 perm   2 sec   (6500 perm/sec)   p_kst 5.079000e-01   p_cons 6.221000e-01   p_joint 7.266000e-01

Outputting figure to mutsig2_images.part000000000137/PRB2.3_1263_10000_0.5079_0.6221_0.7266.png
                gene_name: PRB2
               theta_stop: 0.039 
                    nperm: 10000 
                     p_ks: 0.51 
        ci_ks_bounds_left: 0.50 
       ci_ks_bounds_right: 0.52 
                   p_cons: 0.62 
      ci_cons_bounds_left: 0.61 
     ci_cons_bounds_right: 0.63 
                  p_joint: 0.73 
     ci_joint_bounds_left: 0.72 
    ci_joint_bounds_right: 0.74 

Current progress: 57 percent done.
PRKD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.274638e-02	ci left: 7.394702e-01	ci right 7.565851e-01	k: 7481	n:10000
KS ci ratio: 1.816171e-02	ci left: 8.156806e-01	ci right 8.307306e-01	k: 8233	n:10000
PRKD1   10000 perm   2 sec   (5766 perm/sec)   p_kst 8.233000e-01   p_cons 7.481000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000137/PRKD1.3_2811_10000_0.8233_0.7481_1.png
                gene_name: PRKD1
               theta_stop: 0.023 
                    nperm: 10000 
                     p_ks: 0.82 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.76 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 71 percent done.
PRDM4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.054989e-02	ci left: 4.731620e-01	ci right 4.928479e-01	k: 4830	n:10000
Cons ci ratio: 1.953949e-02	ci left: 7.930377e-01	ci right 8.087866e-01	k: 8010	n:10000
KS ci ratio: 4.865692e-02	ci left: 3.839072e-01	ci right 4.031548e-01	k: 3935	n:10000
PRDM4   10000 perm   2 sec   (6119 perm/sec)   p_kst 3.935000e-01   p_cons 8.010000e-01   p_joint 4.830000e-01

Outputting figure to mutsig2_images.part000000000137/PRDM4.2_2450_10000_0.3935_0.801_0.483.png
                gene_name: PRDM4
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.39 
        ci_ks_bounds_left: 0.38 
       ci_ks_bounds_right: 0.40 
                   p_cons: 0.80 
      ci_cons_bounds_left: 0.79 
     ci_cons_bounds_right: 0.81 
                  p_joint: 0.48 
     ci_joint_bounds_left: 0.47 
    ci_joint_bounds_right: 0.49 

Current progress: 86 percent done.
PRDM8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.058591e-02	ci left: 3.655984e-01	ci right 3.846744e-01	k: 3751	n:10000
Cons ci ratio: 1.147477e-01	ci left: 9.847268e-02	ci right 1.105588e-01	k: 1044	n:10000
KS ci ratio: 1.172054e-02	ci left: 9.124500e-01	ci right 9.233051e-01	k: 9180	n:10000
PRDM8   10000 perm   2 sec   (6202 perm/sec)   p_kst 9.180000e-01   p_cons 1.044000e-01   p_joint 3.751000e-01

Joint ci ratio: 4.565828e-02	ci left: 2.631114e-01	ci right 2.754557e-01	k: 5385	n:20000
Cons ci ratio: 8.098908e-02	ci left: 1.005877e-01	ci right 1.091276e-01	k: 2096	n:20000
KS ci ratio: 8.411871e-03	ci left: 9.117637e-01	ci right 9.195149e-01	k: 18314	n:20000
PRDM8   20000 perm   4 sec   (5465 perm/sec)   p_kst 9.157000e-01   p_cons 1.048000e-01   p_joint 2.692500e-01

Outputting figure to mutsig2_images.part000000000137/PRDM8.2_2082_20000_0.9157_0.1048_0.26925.png
                gene_name: PRDM8
               theta_stop: 0.081 
                    nperm: 20000 
                     p_ks: 0.92 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.92 
                   p_cons: 0.10 
      ci_cons_bounds_left: 0.10 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.26 
    ci_joint_bounds_right: 0.28 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000137
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 137 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1652>
Subject: Job 8704313: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1652>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000138> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 19:38:08 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000138.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000138.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 138  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000138.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    154.97 sec.
    Max Memory :      5448 MB
    Max Swap   :      8297 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
138
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 138
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 138: processing genes 12395 - 12484
Calculating significance of each gene.
Using projection method.
12395	PRKG1	1.233123e-01
12396	PRKG2	1
12397	PRKRA	1
12398	PRKRIP1	1
12399	PRKRIR	1
12400	PRKX	1
12401	PRL	1
12402	PRLH	1
12403	PRLHR	1
12404	PRLR	1
12405	PRM1	1
12406	PRM2	1
12407	PRM3	1
12408	PRMT1	1
12409	PRMT10	1
12410	PRMT2	1
12411	PRMT3	1.921205e-01
12412	PRMT5	1
12413	PRMT6	1
12414	PRMT7	1
12415	PRMT8	1
12416	PRND	1
12417	PRNP	1
12418	PROC	1.142888e-01
12419	PROCA1	1
12420	PROCR	1
12421	PRODH	1
12422	PRODH2	1
12423	PROK1	1
12424	PROK2	1
12425	PROKR1	1
12426	PROKR2	9.041041e-02
12427	PROL1	1
12428	PROM1	1
12429	PROM2	2.174122e-01
12430	PROP1	1
In gene PROS1 the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 2056    n = 1	mu =   1.34e-07
12431	PROS1	1.415517e-01
12432	PROSC	1
12433	PROX1	1
12434	PROX2	1
12435	PROZ	1
12436	PRPF18	1
12437	PRPF19	1
12438	PRPF3	1.362914e-01
12439	PRPF31	1
12440	PRPF38A	1
12441	PRPF38B	8.957302e-03
12442	PRPF39	9.992988e-03
12443	PRPF4	1
12444	PRPF40A	1
12445	PRPF40B	2.855462e-01
12446	PRPF4B	1
12447	PRPF6	2.248541e-01
12448	PRPF8	3.272773e-01
12449	PRPH	1
12450	PRPH2	1
12451	PRPS1	1.014808e-01
12452	PRPS1L1	1
12453	PRPS2	1
12454	PRPSAP1	1
12455	PRPSAP2	1
12456	PRR11	1
12457	PRR12	1
12458	PRR13	1
12459	PRR14	1
12460	PRR15	1
12461	PRR15L	1
12462	PRR16	1
12463	PRR19	1
12464	PRR21	1
12465	PRR22	5.206586e-02
12466	PRR23A	1
12467	PRR23B	1
12468	PRR23C	1
12469	PRR25	1
12470	PRR3	1
12471	PRR4	1
12472	PRR5	1
12473	PRR5-ARHGAP8	1
12474	PRR5L	1
12475	PRR7	1
12476	PRRC1	9.223340e-02
12477	PRRG1	2.952800e-02
12478	PRRG2	1
12479	PRRG3	1
12480	PRRG4	1
12481	PRRT1	1
12482	PRRT2	1
12483	PRRT3	1
12484	PRRX1	1
Done

Running MutSig 2:
Scatter job 138: processing genes 12395 - 12484
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PRPF38B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.376300e-02	ci left: 3.376659e-01	ci right 3.564232e-01	k: 3470	n:10000
KS ci ratio: 7.245979e-02	ci left: 2.181294e-01	ci right 2.346303e-01	k: 2263	n:10000
PRPF38B   10000 perm   2 sec   (6021 perm/sec)   p_kst 2.263000e-01   p_cons 3.470000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000138/PRPF38B.2_1665_10000_0.2263_0.347_1.png
                gene_name: PRPF38B
               theta_stop: 0.072 
                    nperm: 10000 
                     p_ks: 0.23 
        ci_ks_bounds_left: 0.22 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
PRPF39
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.959375e-02	ci left: 1.873727e-01	ci right 2.030052e-01	k: 1951	n:10000
Cons ci ratio: 1.487901e-01	ci left: 6.005239e-02	ci right 6.980294e-02	k: 648	n:10000
KS ci ratio: 4.197272e-02	ci left: 4.559843e-01	ci right 4.756356e-01	k: 4658	n:10000
PRPF39   10000 perm   2 sec   (6061 perm/sec)   p_kst 4.658000e-01   p_cons 6.480000e-02   p_joint 1.951000e-01

Joint ci ratio: 5.322437e-02	ci left: 2.076398e-01	ci right 2.190437e-01	k: 4266	n:20000
Cons ci ratio: 1.064906e-01	ci left: 6.006147e-02	ci right 6.686612e-02	k: 1268	n:20000
KS ci ratio: 2.972042e-02	ci left: 4.582178e-01	ci right 4.720923e-01	k: 9303	n:20000
PRPF39   20000 perm   4 sec   (5405 perm/sec)   p_kst 4.651500e-01   p_cons 6.340000e-02   p_joint 2.133000e-01

Joint ci ratio: 8.054963e-02	ci left: 7.021196e-02	ci right 7.613768e-02	k: 2194	n:30000
Cons ci ratio: 8.645384e-02	ci left: 6.135404e-02	ci right 6.693073e-02	k: 1923	n:30000
KS ci ratio: 2.433485e-02	ci left: 4.581107e-01	ci right 4.694297e-01	k: 13913	n:30000
PRPF39   30000 perm   6 sec   (5163 perm/sec)   p_kst 4.637667e-01   p_cons 6.410000e-02   p_joint 7.313333e-02

Outputting figure to mutsig2_images.part000000000138/PRPF39.2_2062_30000_0.46377_0.0641_0.073133.png
                gene_name: PRPF39
               theta_stop: 0.086 
                    nperm: 30000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.064 
      ci_cons_bounds_left: 0.061 
     ci_cons_bounds_right: 0.067 
                  p_joint: 0.073 
     ci_joint_bounds_left: 0.070 
    ci_joint_bounds_right: 0.076 

Current progress: 67 percent done.
PRPF8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.738033e-02	ci left: 3.089757e-01	ci right 3.273303e-01	k: 3181	n:10000
Cons ci ratio: 6.753509e-02	ci left: 2.434149e-01	ci right 2.605298e-01	k: 2519	n:10000
KS ci ratio: 4.132077e-02	ci left: 4.637727e-01	ci right 4.834426e-01	k: 4736	n:10000
PRPF8   10000 perm   2 sec   (4366 perm/sec)   p_kst 4.736000e-01   p_cons 2.519000e-01   p_joint 3.181000e-01

Outputting figure to mutsig2_images.part000000000138/PRPF8.2_7176_10000_0.4736_0.2519_0.3181.png
                gene_name: PRPF8
               theta_stop: 0.068 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.25 
      ci_cons_bounds_left: 0.24 
     ci_cons_bounds_right: 0.26 
                  p_joint: 0.32 
     ci_joint_bounds_left: 0.31 
    ci_joint_bounds_right: 0.33 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000138
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 138 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1710>
Subject: Job 8704314: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1710>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000139> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 19:38:52 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000139.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000139.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 139  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000139.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    201.55 sec.
    Max Memory :      5887 MB
    Max Swap   :      8537 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
139
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 139
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 139: processing genes 12485 - 12575
Calculating significance of each gene.
Using projection method.
12485	PRRX2	1
12486	PRSS1	1
12487	PRSS12	2.157054e-02
12488	PRSS16	1
12489	PRSS2	1
12490	PRSS21	1
12491	PRSS22	1
12492	PRSS23	1
12493	PRSS27	1
12494	PRSS3	1
12495	PRSS33	1
12496	PRSS35	1
12497	PRSS36	1
12498	PRSS37	1
12499	PRSS38	6.292973e-02
12500	PRSS42	1
12501	PRSS45	1
12502	PRSS48	1
In gene PRSS50 the following bins exceed PROBCAP:
    THCA-DJ-A2Q2-TP	categ 6	N = 918     n = 1	mu =   1.04e-07
12503	PRSS50	4.662130e-02
12504	PRSS53	1
12505	PRSS54	1
12506	PRSS55	9.362831e-03
12507	PRSS8	1
12508	PRSSL1	1.772345e-02
12509	PRTFDC1	1
12510	PRTG	1
12511	PRTN3	1
12512	PRUNE	1
12513	PRUNE2	4.365912e-01
12514	PRX	1
12515	PSAP	1
12516	PSAT1	5.830363e-02
12517	PSCA	1
12518	PSD	1
12519	PSD2	3.347679e-01
12520	PSD3	2.538561e-01
12521	PSD4	1
12522	PSEN1	1
12523	PSEN2	1
12524	PSENEN	1
12525	PSG1	1
12526	PSG11	1
12527	PSG2	1
12528	PSG3	1.182333e-01
12529	PSG4	1.713070e-01
12530	PSG5	1.543307e-01
12531	PSG6	5.736037e-02
12532	PSG7	1
12533	PSG8	1.479067e-02
12534	PSG9	2.749979e-02
12535	PSIP1	1.906876e-01
12536	PSKH1	1
12537	PSKH2	1
12538	PSMA1	1
12539	PSMA2	1
12540	PSMA3	1
12541	PSMA4	1
12542	PSMA5	1
12543	PSMA6	5.556972e-02
12544	PSMA7	1
12545	PSMA8	1
12546	PSMB1	1
12547	PSMB10	1
12548	PSMB11	1
12549	PSMB2	1
12550	PSMB3	1
12551	PSMB4	1
12552	PSMB5	1
12553	PSMB6	1
12554	PSMB7	9.102008e-02
12555	PSMB8	1
12556	PSMB9	1
12557	PSMC1	1
12558	PSMC2	1
12559	PSMC3	1
12560	PSMC3IP	1.045130e-01
12561	PSMC4	1
12562	PSMC5	1
12563	PSMC6	1
12564	PSMD1	1
12565	PSMD10	1
12566	PSMD11	1
12567	PSMD12	1
12568	PSMD13	1
12569	PSMD14	1
12570	PSMD2	1
12571	PSMD3	1
12572	PSMD4	1
12573	PSMD5	1
12574	PSMD6	1
12575	PSMD7	1
Done

Running MutSig 2:
Scatter job 139: processing genes 12485 - 12575
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PRSS12
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.385131e-02	ci left: 7.209804e-01	ci right 7.384856e-01	k: 7298	n:10000
KS ci ratio: 3.701324e-02	ci left: 5.187591e-01	ci right 5.384242e-01	k: 5286	n:10000
PRSS12   10000 perm   2 sec   (5725 perm/sec)   p_kst 5.286000e-01   p_cons 7.298000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000139/PRSS12.2_2680_10000_0.5286_0.7298_1.png
                gene_name: PRSS12
               theta_stop: 0.037 
                    nperm: 10000 
                     p_ks: 0.53 
        ci_ks_bounds_left: 0.52 
       ci_ks_bounds_right: 0.54 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.72 
     ci_cons_bounds_right: 0.74 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
PRSS55
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.974606e-02	ci left: 1.867820e-01	ci right 2.023963e-01	k: 1945	n:10000
Cons ci ratio: 1.469819e-01	ci left: 6.150035e-02	ci right 7.135407e-02	k: 663	n:10000
KS ci ratio: 3.198987e-02	ci left: 5.905209e-01	ci right 6.098207e-01	k: 6002	n:10000
PRSS55   10000 perm   2 sec   (6572 perm/sec)   p_kst 6.002000e-01   p_cons 6.630000e-02   p_joint 1.945000e-01

Joint ci ratio: 7.924803e-02	ci left: 1.046639e-01	ci right 1.133501e-01	k: 2179	n:20000
Cons ci ratio: 1.029821e-01	ci left: 6.406102e-02	ci right 7.106534e-02	k: 1350	n:20000
KS ci ratio: 2.282706e-02	ci left: 5.890105e-01	ci right 6.026617e-01	k: 11917	n:20000
PRSS55   20000 perm   3 sec   (5810 perm/sec)   p_kst 5.958500e-01   p_cons 6.750000e-02   p_joint 1.089500e-01

Joint ci ratio: 7.102902e-02	ci left: 8.888357e-02	ci right 9.546233e-02	k: 2764	n:30000
Cons ci ratio: 8.389662e-02	ci left: 6.498045e-02	ci right 7.070358e-02	k: 2034	n:30000
KS ci ratio: 1.860826e-02	ci left: 5.910563e-01	ci right 6.021917e-01	k: 17899	n:30000
PRSS55   30000 perm   5 sec   (5542 perm/sec)   p_kst 5.966333e-01   p_cons 6.780000e-02   p_joint 9.213333e-02

Outputting figure to mutsig2_images.part000000000139/PRSS55.2_1079_30000_0.59663_0.0678_0.092133.png
                gene_name: PRSS55
               theta_stop: 0.084 
                    nperm: 30000 
                     p_ks: 0.60 
        ci_ks_bounds_left: 0.59 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.068 
      ci_cons_bounds_left: 0.065 
     ci_cons_bounds_right: 0.071 
                  p_joint: 0.092 
     ci_joint_bounds_left: 0.089 
    ci_joint_bounds_right: 0.095 

Current progress: 67 percent done.
PSG8
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.786829e-01	ci left: 1.669424e-02	ci right 2.219075e-02	k: 193	n:10000
Cons ci ratio: 3.634162e-01	ci left: 9.412543e-03	ci right 1.367914e-02	k: 114	n:10000
KS ci ratio: 1.209756e-02	ci left: 9.074079e-01	ci right 9.185501e-01	k: 9131	n:10000
PSG8   10000 perm   2 sec   (6524 perm/sec)   p_kst 9.131000e-01   p_cons 1.140000e-02   p_joint 1.930000e-02

Joint ci ratio: 2.326135e-01	ci left: 1.237052e-02	ci right 1.567300e-02	k: 279	n:20000
Cons ci ratio: 2.703794e-01	ci left: 8.993904e-03	ci right 1.185112e-02	k: 207	n:20000
KS ci ratio: 8.525720e-03	ci left: 9.096209e-01	ci right 9.174584e-01	k: 18272	n:20000
PSG8   20000 perm   3 sec   (5770 perm/sec)   p_kst 9.136000e-01   p_cons 1.035000e-02   p_joint 1.395000e-02

Joint ci ratio: 1.113082e-01	ci left: 3.748611e-02	ci right 4.193693e-02	k: 1190	n:30000
Cons ci ratio: 2.179593e-01	ci left: 9.503598e-03	ci right 1.185927e-02	k: 319	n:30000
KS ci ratio: 6.921045e-03	ci left: 9.112789e-01	ci right 9.176406e-01	k: 27435	n:30000
PSG8   30000 perm   5 sec   (5480 perm/sec)   p_kst 9.145000e-01   p_cons 1.063333e-02   p_joint 3.966667e-02

Joint ci ratio: 6.566646e-02	ci left: 7.910757e-02	ci right 8.450333e-02	k: 3271	n:40000
Cons ci ratio: 1.858457e-01	ci left: 9.977125e-03	ci right 1.204478e-02	k: 439	n:40000
KS ci ratio: 5.995526e-03	ci left: 9.116663e-01	ci right 9.171733e-01	k: 36578	n:40000
PSG8   40000 perm   8 sec   (5286 perm/sec)   p_kst 9.144500e-01   p_cons 1.097500e-02   p_joint 8.177500e-02

Joint ci ratio: 5.698410e-02	ci left: 8.399092e-02	ci right 8.893722e-02	k: 4322	n:50000
Cons ci ratio: 1.669951e-01	ci left: 9.989194e-03	ci right 1.182825e-02	k: 544	n:50000
KS ci ratio: 5.396996e-03	ci left: 9.109412e-01	ci right 9.158906e-01	k: 45672	n:50000
PSG8   50000 perm   10 sec   (5149 perm/sec)   p_kst 9.134400e-01   p_cons 1.088000e-02   p_joint 8.644000e-02

Joint ci ratio: 5.389215e-02	ci left: 7.884533e-02	ci right 8.322862e-02	k: 4861	n:60000
Cons ci ratio: 1.502538e-01	ci left: 1.037333e-02	ci right 1.207444e-02	k: 672	n:60000
KS ci ratio: 4.942465e-03	ci left: 9.106491e-01	ci right 9.151775e-01	k: 54776	n:60000
PSG8   60000 perm   12 sec   (5026 perm/sec)   p_kst 9.129333e-01   p_cons 1.120000e-02   p_joint 8.101667e-02

Joint ci ratio: 9.885092e-02	ci left: 2.088426e-02	ci right 2.306990e-02	k: 1537	n:70000
Cons ci ratio: 1.391231e-01	ci left: 1.043359e-02	ci right 1.200732e-02	k: 784	n:70000
KS ci ratio: 4.556993e-03	ci left: 9.114799e-01	ci right 9.156571e-01	k: 63951	n:70000
PSG8   70000 perm   14 sec   (4917 perm/sec)   p_kst 9.135857e-01   p_cons 1.120000e-02   p_joint 2.195714e-02

Joint ci ratio: 1.081724e-01	ci left: 1.527568e-02	ci right 1.703466e-02	k: 1291	n:80000
Cons ci ratio: 1.289899e-01	ci left: 1.067587e-02	ci right 1.215988e-02	k: 912	n:80000
KS ci ratio: 4.255848e-03	ci left: 9.118718e-01	ci right 9.157732e-01	k: 73107	n:80000
PSG8   80000 perm   17 sec   (4812 perm/sec)   p_kst 9.138375e-01   p_cons 1.140000e-02   p_joint 1.613750e-02

Joint ci ratio: 8.169402e-02	ci left: 2.392444e-02	ci right 2.597300e-02	k: 2244	n:90000
Cons ci ratio: 1.213220e-01	ci left: 1.077054e-02	ci right 1.217232e-02	k: 1031	n:90000
KS ci ratio: 4.023567e-03	ci left: 9.115436e-01	ci right 9.152297e-01	k: 82206	n:90000
PSG8   90000 perm   19 sec   (4720 perm/sec)   p_kst 9.134000e-01   p_cons 1.145556e-02   p_joint 2.493333e-02

Joint ci ratio: 7.711341e-02	ci left: 2.421775e-02	ci right 2.616992e-02	k: 2518	n:100000
Cons ci ratio: 1.138801e-01	ci left: 1.104271e-02	ci right 1.238583e-02	k: 1170	n:100000
KS ci ratio: 3.818764e-03	ci left: 9.115692e-01	ci right 9.150668e-01	k: 91333	n:100000
PSG8   100000 perm   22 sec   (4624 perm/sec)   p_kst 9.133300e-01   p_cons 1.170000e-02   p_joint 2.518000e-02

Joint ci ratio: 7.363253e-02	ci left: 2.419250e-02	ci right 2.605083e-02	k: 2762	n:110000
Cons ci ratio: 1.087557e-01	ci left: 1.103751e-02	ci right 1.231571e-02	k: 1283	n:110000
KS ci ratio: 3.636079e-03	ci left: 9.118692e-01	ci right 9.151999e-01	k: 100490	n:110000
PSG8   110000 perm   24 sec   (4545 perm/sec)   p_kst 9.135455e-01   p_cons 1.166364e-02   p_joint 2.510909e-02

Joint ci ratio: 9.291207e-02	ci left: 1.393708e-02	ci right 1.530319e-02	k: 1753	n:120000
Cons ci ratio: 1.042284e-01	ci left: 1.104242e-02	ci right 1.226469e-02	k: 1397	n:120000
KS ci ratio: 3.478415e-03	ci left: 9.120718e-01	ci right 9.152581e-01	k: 109641	n:120000
PSG8   120000 perm   27 sec   (4466 perm/sec)   p_kst 9.136750e-01   p_cons 1.164167e-02   p_joint 1.460833e-02

Joint ci ratio: 9.267097e-02	ci left: 1.294734e-02	ci right 1.421295e-02	k: 1764	n:130000
Cons ci ratio: 1.006959e-01	ci left: 1.094249e-02	ci right 1.211022e-02	k: 1497	n:130000
KS ci ratio: 3.341579e-03	ci left: 9.121527e-01	ci right 9.152134e-01	k: 118780	n:130000
PSG8   130000 perm   30 sec   (4389 perm/sec)   p_kst 9.136923e-01   p_cons 1.151538e-02   p_joint 1.356923e-02

Joint ci ratio: 9.121055e-02	ci left: 1.242714e-02	ci right 1.362173e-02	k: 1822	n:140000
Cons ci ratio: 9.679750e-02	ci left: 1.101778e-02	ci right 1.214544e-02	k: 1620	n:140000
KS ci ratio: 3.225983e-03	ci left: 9.119146e-01	ci right 9.148682e-01	k: 127876	n:140000
PSG8   140000 perm   32 sec   (4315 perm/sec)   p_kst 9.134000e-01   p_cons 1.157143e-02   p_joint 1.301429e-02

Outputting figure to mutsig2_images.part000000000139/PSG8.2_1322_140000_0.9134_0.011571_0.013014.png
                gene_name: PSG8
               theta_stop: 0.097 
                    nperm: 140000 
                     p_ks: 0.91 
        ci_ks_bounds_left: 0.91 
       ci_ks_bounds_right: 0.91 
                   p_cons: 0.012 
      ci_cons_bounds_left: 0.011 
     ci_cons_bounds_right: 0.012 
                  p_joint: 0.013 
     ci_joint_bounds_left: 0.012 
    ci_joint_bounds_right: 0.014 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000139
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 139 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1723>
Subject: Job 8704316: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1723>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000140> was used as the working directory.
Started at Thu Nov 15 19:35:49 2012
Results reported at Thu Nov 15 19:38:57 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000140.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000140.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 140  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000140.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    175.57 sec.
    Max Memory :      5930 MB
    Max Swap   :      8533 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
140
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 140
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 140: processing genes 12576 - 12665
Calculating significance of each gene.
Using projection method.
12576	PSMD8	1
12577	PSMD9	1
12578	PSME1	1
12579	PSME2	1
12580	PSME3	1
12581	PSME4	1
12582	PSMF1	1
12583	PSMG1	1
12584	PSMG2	1
12585	PSMG3	1
12586	PSORS1C1	1
12587	PSORS1C2	1
12588	PSPC1	2.539827e-01
12589	PSPH	1
12590	PSPN	1
12591	PSRC1	1
12592	PSTK	1
12593	PSTPIP1	1
12594	PSTPIP2	1
12595	PTAFR	1
12596	PTAR1	1
12597	PTBP1	1
12598	PTBP2	9.081720e-02
12599	PTCD1	7.088228e-03
12600	PTCD2	2.630796e-02
12601	PTCD3	1
12602	PTCH1	2.004969e-01
12603	PTCH2	3.710338e-01
12604	PTCHD1	2.413110e-01
12605	PTCHD2	1
12606	PTCHD3	1.402912e-01
12607	PTCRA	1
12608	PTDSS1	1
12609	PTDSS2	1.762302e-01
12610	PTEN	2.021743e-03
12611	PTER	1
12612	PTF1A	1
12613	PTGDR	1
12614	PTGDS	1
12615	PTGER2	1
12616	PTGER3	1
12617	PTGER4	2.494495e-02
12618	PTGES	2.814889e-02
12619	PTGES2	1.302871e-01
12620	PTGES3	1
12621	PTGFR	1
12622	PTGFRN	1
12623	PTGIR	1
12624	PTGIS	1
12625	PTGR1	6.391217e-02
12626	PTGR2	1.290539e-01
12627	PTGS1	1
12628	PTGS2	1
12629	PTH	1
12630	PTH1R	1
12631	PTH2	1
12632	PTH2R	2.183316e-01
12633	PTHLH	1
12634	PTK2	1
12635	PTK2B	1.161735e-01
12636	PTK6	1
12637	PTK7	1
12638	PTMA	1
12639	PTMS	1
12640	PTN	1
12641	PTOV1	1
12642	PTP4A1	1
12643	PTP4A2	1
12644	PTP4A3	1
12645	PTPDC1	1
12646	PTPLA	1
12647	PTPLAD1	1
12648	PTPLAD2	2.913889e-02
12649	PTPLB	1
12650	PTPMT1	1
12651	PTPN1	1
12652	PTPN11	1
12653	PTPN12	1
12654	PTPN13	2.844239e-01
12655	PTPN14	1
12656	PTPN18	1
12657	PTPN2	1
12658	PTPN21	4.608192e-01
12659	PTPN22	3.036517e-01
12660	PTPN23	1
12661	PTPN3	1
12662	PTPN4	1
12663	PTPN5	1
12664	PTPN6	1
12665	PTPN7	1
Done

Running MutSig 2:
Scatter job 140: processing genes 12576 - 12665
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PTCD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.321220e-01	ci left: 7.553121e-02	ci right 8.631442e-02	k: 808	n:10000
Cons ci ratio: 1.398780e-02	ci left: 8.807342e-01	ci right 8.932393e-01	k: 8871	n:10000
KS ci ratio: 2.371212e-01	ci left: 2.344048e-02	ci right 2.983930e-02	k: 265	n:10000
PTCD1   10000 perm   2 sec   (6327 perm/sec)   p_kst 2.650000e-02   p_cons 8.871000e-01   p_joint 8.080000e-02

Joint ci ratio: 7.278719e-02	ci left: 1.220210e-01	ci right 1.312878e-01	k: 2532	n:20000
Cons ci ratio: 9.728575e-03	ci left: 8.859378e-01	ci right 8.946483e-01	k: 17807	n:20000
KS ci ratio: 1.585670e-01	ci left: 2.729474e-02	ci right 3.204331e-02	k: 592	n:20000
PTCD1   20000 perm   6 sec   (3619 perm/sec)   p_kst 2.960000e-02   p_cons 8.903500e-01   p_joint 1.266000e-01

Joint ci ratio: 6.412440e-02	ci left: 1.072035e-01	ci right 1.143387e-01	k: 3322	n:30000
Cons ci ratio: 7.911124e-03	ci left: 8.875541e-01	ci right 8.946366e-01	k: 26734	n:30000
KS ci ratio: 1.324542e-01	ci left: 2.648489e-02	ci right 3.027385e-02	k: 850	n:30000
PTCD1   30000 perm   7 sec   (4004 perm/sec)   p_kst 2.833333e-02   p_cons 8.911333e-01   p_joint 1.107333e-01

Joint ci ratio: 6.775175e-02	ci left: 7.460260e-02	ci right 7.985897e-02	k: 3088	n:40000
Cons ci ratio: 6.859324e-03	ci left: 8.878038e-01	ci right 8.939393e-01	k: 35636	n:40000
KS ci ratio: 1.134630e-01	ci left: 2.732867e-02	ci right 3.064018e-02	k: 1158	n:40000
PTCD1   40000 perm   9 sec   (4220 perm/sec)   p_kst 2.895000e-02   p_cons 8.909000e-01   p_joint 7.720000e-02

Joint ci ratio: 7.121160e-02	ci left: 5.510159e-02	ci right 5.919001e-02	k: 2856	n:50000
Cons ci ratio: 6.141398e-03	ci left: 8.879324e-01	ci right 8.934221e-01	k: 44535	n:50000
KS ci ratio: 1.021308e-01	ci left: 2.715643e-02	ci right 3.009863e-02	k: 1430	n:50000
PTCD1   50000 perm   12 sec   (4336 perm/sec)   p_kst 2.860000e-02   p_cons 8.907000e-01   p_joint 5.712000e-02

Joint ci ratio: 4.673062e-02	ci left: 1.025084e-01	ci right 1.074298e-01	k: 6297	n:60000
Cons ci ratio: 5.615849e-03	ci left: 8.878395e-01	ci right 8.928560e-01	k: 53422	n:60000
KS ci ratio: 9.246469e-02	ci left: 2.773695e-02	ci right 3.044219e-02	k: 1744	n:60000
PTCD1   60000 perm   14 sec   (4386 perm/sec)   p_kst 2.906667e-02   p_cons 8.903667e-01   p_joint 1.049500e-01

Outputting figure to mutsig2_images.part000000000140/PTCD1.3_2131_60000_0.029067_0.89037_0.10495.png
                gene_name: PTCD1
               theta_stop: 0.092 
                    nperm: 60000 
                     p_ks: 0.029 
        ci_ks_bounds_left: 0.028 
       ci_ks_bounds_right: 0.030 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.10 
     ci_joint_bounds_left: 0.10 
    ci_joint_bounds_right: 0.11 

Current progress: 25 percent done.
PTCH1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.512432e-02	ci left: 2.058972e-01	ci right 2.220697e-01	k: 2139	n:10000
KS ci ratio: 5.871592e-02	ci left: 2.991568e-01	ci right 3.173550e-01	k: 3082	n:10000
PTCH1   10000 perm   2 sec   (5702 perm/sec)   p_kst 3.082000e-01   p_cons 2.139000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000140/PTCH1.2_4645_10000_0.3082_0.2139_1.png
                gene_name: PTCH1
               theta_stop: 0.075 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
PTEN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.851014e-02	ci left: 8.099906e-01	ci right 8.252239e-01	k: 8177	n:10000
Cons ci ratio: 4.744543e-02	ci left: 3.959551e-01	ci right 4.152999e-01	k: 4056	n:10000
KS ci ratio: 4.045260e-02	ci left: 4.743609e-01	ci right 4.940483e-01	k: 4842	n:10000
PTEN   10000 perm   1 sec   (7295 perm/sec)   p_kst 4.842000e-01   p_cons 4.056000e-01   p_joint 8.177000e-01

Outputting figure to mutsig2_images.part000000000140/PTEN.2_1248_10000_0.4842_0.4056_0.8177.png
                gene_name: PTEN
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.47 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.41 
      ci_cons_bounds_left: 0.40 
     ci_cons_bounds_right: 0.42 
                  p_joint: 0.82 
     ci_joint_bounds_left: 0.81 
    ci_joint_bounds_right: 0.83 

Current progress: 75 percent done.
PTGER4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.217497e-01	ci left: 2.693317e-02	ci right 3.374407e-02	k: 302	n:10000
Cons ci ratio: 5.896315e-01	ci left: 3.113627e-03	ci right 5.787748e-03	k: 43	n:10000
KS ci ratio: 9.015130e-02	ci left: 1.517848e-01	ci right 1.662144e-01	k: 1589	n:10000
PTGER4   10000 perm   1 sec   (7203 perm/sec)   p_kst 1.589000e-01   p_cons 4.300000e-03   p_joint 3.020000e-02

Joint ci ratio: 1.548392e-01	ci left: 2.864136e-02	ci right 3.349624e-02	k: 620	n:20000
Cons ci ratio: 3.677103e-01	ci left: 4.613191e-03	ci right 6.734416e-03	k: 112	n:20000
KS ci ratio: 6.312323e-02	ci left: 1.565232e-01	ci right 1.667754e-01	k: 3232	n:20000
PTGER4   20000 perm   3 sec   (6383 perm/sec)   p_kst 1.616000e-01   p_cons 5.600000e-03   p_joint 3.100000e-02

Joint ci ratio: 1.489458e-01	ci left: 2.088364e-02	ci right 2.427636e-02	k: 676	n:30000
Cons ci ratio: 2.904862e-01	ci left: 5.157558e-03	ci right 6.940142e-03	k: 180	n:30000
KS ci ratio: 5.099865e-02	ci left: 1.603209e-01	ci right 1.687442e-01	k: 4935	n:30000
PTGER4   30000 perm   5 sec   (6110 perm/sec)   p_kst 1.645000e-01   p_cons 6.000000e-03   p_joint 2.253333e-02

Joint ci ratio: 1.312146e-01	ci left: 2.039123e-02	ci right 2.327877e-02	k: 872	n:40000
Cons ci ratio: 2.461547e-01	ci left: 5.524664e-03	ci right 7.098301e-03	k: 251	n:40000
KS ci ratio: 4.415553e-02	ci left: 1.609532e-01	ci right 1.682456e-01	k: 6583	n:40000
PTGER4   40000 perm   7 sec   (5906 perm/sec)   p_kst 1.645750e-01   p_cons 6.275000e-03   p_joint 2.180000e-02

Joint ci ratio: 1.131534e-01	ci left: 2.211213e-02	ci right 2.478359e-02	k: 1171	n:50000
Cons ci ratio: 2.215882e-01	ci left: 5.530762e-03	ci right 6.927498e-03	k: 310	n:50000
KS ci ratio: 3.946527e-02	ci left: 1.615378e-01	ci right 1.680612e-01	k: 8239	n:50000
PTGER4   50000 perm   9 sec   (5714 perm/sec)   p_kst 1.647800e-01   p_cons 6.200000e-03   p_joint 2.342000e-02

Joint ci ratio: 8.736172e-02	ci left: 3.104651e-02	ci right 3.389894e-02	k: 1947	n:60000
Cons ci ratio: 2.012533e-01	ci left: 5.650879e-03	ci right 6.930915e-03	k: 376	n:60000
KS ci ratio: 3.614058e-02	ci left: 1.609625e-01	ci right 1.669034e-01	k: 9835	n:60000
PTGER4   60000 perm   11 sec   (5542 perm/sec)   p_kst 1.639167e-01   p_cons 6.266667e-03   p_joint 3.245000e-02

Joint ci ratio: 9.101751e-02	ci left: 2.463810e-02	ci right 2.700143e-02	k: 1806	n:70000
Cons ci ratio: 1.860764e-01	ci left: 5.713638e-03	ci right 6.899273e-03	k: 440	n:70000
KS ci ratio: 3.347249e-02	ci left: 1.610794e-01	ci right 1.665771e-01	k: 11467	n:70000
PTGER4   70000 perm   13 sec   (5410 perm/sec)   p_kst 1.638143e-01   p_cons 6.285714e-03   p_joint 2.580000e-02

Joint ci ratio: 7.957925e-02	ci left: 2.826479e-02	ci right 3.061950e-02	k: 2354	n:80000
Cons ci ratio: 1.728548e-01	ci left: 5.835200e-03	ci right 6.951050e-03	k: 510	n:80000
KS ci ratio: 3.132107e-02	ci left: 1.611669e-01	ci right 1.663075e-01	k: 13098	n:80000
PTGER4   80000 perm   15 sec   (5276 perm/sec)   p_kst 1.637250e-01   p_cons 6.375000e-03   p_joint 2.942500e-02

Joint ci ratio: 7.478666e-02	ci left: 2.851328e-02	ci right 3.073940e-02	k: 2665	n:90000
Cons ci ratio: 1.643963e-01	ci left: 5.761515e-03	ci right 6.804025e-03	k: 564	n:90000
KS ci ratio: 2.948600e-02	ci left: 1.617188e-01	ci right 1.665696e-01	k: 14772	n:90000
PTGER4   90000 perm   17 sec   (5156 perm/sec)   p_kst 1.641333e-01   p_cons 6.266667e-03   p_joint 2.961111e-02

Joint ci ratio: 5.802303e-02	ci left: 4.238206e-02	ci right 4.492450e-02	k: 4364	n:100000
Cons ci ratio: 1.573249e-01	ci left: 5.684418e-03	ci right 6.664557e-03	k: 616	n:100000
KS ci ratio: 2.797946e-02	ci left: 1.617794e-01	ci right 1.663801e-01	k: 16407	n:100000
PTGER4   100000 perm   20 sec   (5051 perm/sec)   p_kst 1.640700e-01   p_cons 6.160000e-03   p_joint 4.364000e-02

Joint ci ratio: 6.084303e-02	ci left: 3.525615e-02	ci right 3.747747e-02	k: 3999	n:110000
Cons ci ratio: 1.494175e-01	ci left: 5.753394e-03	ci right 6.691108e-03	k: 683	n:110000
KS ci ratio: 2.669932e-02	ci left: 1.616625e-01	ci right 1.660462e-01	k: 18023	n:110000
PTGER4   110000 perm   22 sec   (4951 perm/sec)   p_kst 1.638455e-01   p_cons 6.209091e-03   p_joint 3.635455e-02

Joint ci ratio: 5.674902e-02	ci left: 3.715538e-02	ci right 3.933368e-02	k: 4588	n:120000
Cons ci ratio: 1.426896e-01	ci left: 5.803863e-03	ci right 6.703582e-03	k: 749	n:120000
KS ci ratio: 2.560983e-02	ci left: 1.612540e-01	ci right 1.654456e-01	k: 19601	n:120000
PTGER4   120000 perm   25 sec   (4855 perm/sec)   p_kst 1.633417e-01   p_cons 6.241667e-03   p_joint 3.823333e-02

Joint ci ratio: 5.457648e-02	ci left: 3.712655e-02	ci right 3.921719e-02	k: 4961	n:130000
Cons ci ratio: 1.373045e-01	ci left: 5.802787e-03	ci right 6.665615e-03	k: 809	n:130000
KS ci ratio: 2.459164e-02	ci left: 1.614857e-01	ci right 1.655140e-01	k: 21254	n:130000
PTGER4   130000 perm   27 sec   (4770 perm/sec)   p_kst 1.634923e-01   p_cons 6.223077e-03   p_joint 3.816154e-02

Joint ci ratio: 5.264601e-02	ci left: 3.708911e-02	ci right 3.910151e-02	k: 5332	n:140000
Cons ci ratio: 1.321049e-01	ci left: 5.836951e-03	ci right 6.669412e-03	k: 874	n:140000
KS ci ratio: 2.369958e-02	ci left: 1.615307e-01	ci right 1.654119e-01	k: 22885	n:140000
PTGER4   140000 perm   30 sec   (4687 perm/sec)   p_kst 1.634643e-01   p_cons 6.242857e-03   p_joint 3.808571e-02

Joint ci ratio: 5.087444e-02	ci left: 3.710389e-02	ci right 3.904735e-02	k: 5710	n:150000
Cons ci ratio: 1.269797e-01	ci left: 5.912284e-03	ci right 6.720311e-03	k: 946	n:150000
KS ci ratio: 2.288633e-02	ci left: 1.617113e-01	ci right 1.654617e-01	k: 24537	n:150000
PTGER4   150000 perm   33 sec   (4586 perm/sec)   p_kst 1.635800e-01   p_cons 6.306667e-03   p_joint 3.806667e-02

Joint ci ratio: 4.926626e-02	ci left: 3.712399e-02	ci right 3.900529e-02	k: 6089	n:160000
Cons ci ratio: 1.225899e-01	ci left: 5.960565e-03	ci right 6.744984e-03	k: 1015	n:160000
KS ci ratio: 2.219349e-02	ci left: 1.613549e-01	ci right 1.649823e-01	k: 26106	n:160000
PTGER4   160000 perm   35 sec   (4508 perm/sec)   p_kst 1.631625e-01   p_cons 6.343750e-03   p_joint 3.805625e-02

Joint ci ratio: 5.406120e-02	ci left: 2.918837e-02	ci right 3.081595e-02	k: 5099	n:170000
Cons ci ratio: 1.200825e-01	ci left: 5.855188e-03	ci right 6.608859e-03	k: 1058	n:170000
KS ci ratio: 2.151959e-02	ci left: 1.615515e-01	ci right 1.650717e-01	k: 27762	n:170000
PTGER4   170000 perm   38 sec   (4435 perm/sec)   p_kst 1.633059e-01   p_cons 6.223529e-03   p_joint 2.999412e-02

Joint ci ratio: 5.635980e-02	ci left: 2.543408e-02	ci right 2.691456e-02	k: 4710	n:180000
Cons ci ratio: 1.165057e-01	ci left: 5.885723e-03	ci right 6.619204e-03	k: 1124	n:180000
KS ci ratio: 2.089592e-02	ci left: 1.618274e-01	ci right 1.652501e-01	k: 29436	n:180000
PTGER4   180000 perm   41 sec   (4359 perm/sec)   p_kst 1.635333e-01   p_cons 6.244444e-03   p_joint 2.616667e-02

Joint ci ratio: 5.480413e-02	ci left: 2.550196e-02	ci right 2.694412e-02	k: 4981	n:190000
Cons ci ratio: 1.127552e-01	ci left: 5.964494e-03	ci right 6.682272e-03	k: 1200	n:190000
KS ci ratio: 2.031999e-02	ci left: 1.621227e-01	ci right 1.654560e-01	k: 31119	n:190000
PTGER4   190000 perm   44 sec   (4290 perm/sec)   p_kst 1.637842e-01   p_cons 6.315789e-03   p_joint 2.621579e-02

Joint ci ratio: 4.985055e-02	ci left: 2.924188e-02	ci right 3.074178e-02	k: 5997	n:200000
Cons ci ratio: 1.094744e-01	ci left: 6.021135e-03	ci right 6.723287e-03	k: 1273	n:200000
KS ci ratio: 1.979135e-02	ci left: 1.623597e-01	ci right 1.656101e-01	k: 32796	n:200000
PTGER4   200000 perm   47 sec   (4224 perm/sec)   p_kst 1.639800e-01   p_cons 6.365000e-03   p_joint 2.998500e-02

Joint ci ratio: 4.862489e-02	ci left: 2.928863e-02	ci right 3.075295e-02	k: 6303	n:210000
Cons ci ratio: 1.067438e-01	ci left: 6.040205e-03	ci right 6.725908e-03	k: 1339	n:210000
KS ci ratio: 1.930327e-02	ci left: 1.625562e-01	ci right 1.657293e-01	k: 34469	n:210000
PTGER4   210000 perm   50 sec   (4162 perm/sec)   p_kst 1.641381e-01   p_cons 6.376190e-03   p_joint 3.001429e-02

Joint ci ratio: 4.758942e-02	ci left: 2.920573e-02	ci right 3.063396e-02	k: 6581	n:220000
Cons ci ratio: 1.048476e-01	ci left: 5.982475e-03	ci right 6.648815e-03	k: 1388	n:220000
KS ci ratio: 1.886428e-02	ci left: 1.625228e-01	ci right 1.656224e-01	k: 36095	n:220000
PTGER4   220000 perm   54 sec   (4098 perm/sec)   p_kst 1.640682e-01   p_cons 6.309091e-03   p_joint 2.991364e-02

Joint ci ratio: 4.994243e-02	ci left: 2.543505e-02	ci right 2.674214e-02	k: 5999	n:230000
Cons ci ratio: 1.023000e-01	ci left: 6.018837e-03	ci right 6.671958e-03	k: 1458	n:230000
KS ci ratio: 1.844166e-02	ci left: 1.626751e-01	ci right 1.657073e-01	k: 37763	n:230000
PTGER4   230000 perm   57 sec   (4041 perm/sec)   p_kst 1.641870e-01   p_cons 6.339130e-03   p_joint 2.608261e-02

Joint ci ratio: 4.895464e-02	ci left: 2.538345e-02	ci right 2.666136e-02	k: 6244	n:240000
Cons ci ratio: 1.003931e-01	ci left: 5.995467e-03	ci right 6.633210e-03	k: 1514	n:240000
KS ci ratio: 1.803227e-02	ci left: 1.630271e-01	ci right 1.659977e-01	k: 39482	n:240000
PTGER4   240000 perm   60 sec   (3983 perm/sec)   p_kst 1.645083e-01   p_cons 6.308333e-03   p_joint 2.601667e-02

Joint ci ratio: 4.795877e-02	ci left: 2.540342e-02	ci right 2.665560e-02	k: 6506	n:250000
Cons ci ratio: 9.843145e-02	ci left: 5.993582e-03	ci right 6.617947e-03	k: 1575	n:250000
KS ci ratio: 1.766387e-02	ci left: 1.631204e-01	ci right 1.660314e-01	k: 41143	n:250000
PTGER4   250000 perm   64 sec   (3930 perm/sec)   p_kst 1.645720e-01   p_cons 6.300000e-03   p_joint 2.602400e-02

Outputting figure to mutsig2_images.part000000000140/PTGER4.2_1475_250000_0.16457_0.0063_0.026024.png
                gene_name: PTGER4
               theta_stop: 0.098 
                    nperm: 250000 
                     p_ks: 0.16 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.17 
                   p_cons: 0.0063 
      ci_cons_bounds_left: 0.0060 
     ci_cons_bounds_right: 0.0066 
                  p_joint: 0.026 
     ci_joint_bounds_left: 0.025 
    ci_joint_bounds_right: 0.027 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000140
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 140 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1554>
Subject: Job 8704317: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1554>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000141> was used as the working directory.
Started at Thu Nov 15 19:36:03 2012
Results reported at Thu Nov 15 20:28:32 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000141.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000141.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 141  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000141.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   3458.68 sec.
    Max Memory :      6186 MB
    Max Swap   :      8842 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
141
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 141
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 141: processing genes 12666 - 12756
Calculating significance of each gene.
Using projection method.
12666	PTPN9	1
12667	PTPRA	1
12668	PTPRB	3.900550e-01
12669	PTPRC	1.287481e-01
12670	PTPRCAP	1
12671	PTPRD	1.579969e-01
12672	PTPRE	1
12673	PTPRF	1
12674	PTPRG	1
12675	PTPRH	1
12676	PTPRJ	3.295542e-01
12677	PTPRK	4.100574e-01
12678	PTPRM	1
12679	PTPRN	1
12680	PTPRN2	1
12681	PTPRO	9.972995e-02
12682	PTPRR	1
12683	PTPRS	1.246424e-01
12684	PTPRT	1.990110e-01
12685	PTPRU	1
12686	PTPRZ1	1.427987e-02
12687	PTRF	1
12688	PTRH1	1
12689	PTRH2	1
12690	PTS	1
12691	PTTG1	1
12692	PTTG1IP	1
12693	PTTG2	1
12694	PTX3	1
12695	PTX4	1
12696	PUF60	1
12697	PUM1	2.764555e-01
12698	PUM2	2.549022e-01
12699	PURA	1
12700	PURB	1
12701	PURG	1
12702	PUS1	1
12703	PUS10	1
12704	PUS3	1
12705	PUS7	1
12706	PUS7L	1
12707	PUSL1	1
12708	PVALB	1
12709	PVR	1
12710	PVRIG	1
12711	PVRL1	9.091998e-03
12712	PVRL2	1
12713	PVRL3	1
12714	PVRL4	2.558959e-02
12715	PWP1	1
12716	PWP2	3.184791e-02
12717	PWWP2A	3.354443e-02
12718	PWWP2B	1
12719	PXDN	1
12720	PXDNL	1.543348e-01
12721	PXK	1
12722	PXMP2	5.568789e-02
12723	PXMP4	1
12724	PXN	1
12725	PXT1	1
12726	PYCARD	1
12727	PYCR1	1
12728	PYCR2	1
12729	PYCRL	1
12730	PYDC1	1
12731	PYDC2	1
12732	PYGB	3.567450e-01
12733	PYGL	1
12734	PYGM	1
12735	PYGO1	3.217489e-02
12736	PYGO2	1
12737	PYHIN1	1
12738	PYROXD1	1
12739	PYROXD2	1
12740	PYY	1
12741	PZP	1.904258e-02
12742	ProSAPiP1	1
12743	QARS	1
12744	QDPR	1
12745	QKI	1
12746	QPCT	1
12747	QPCTL	1
12748	QPRT	1.133124e-01
12749	QRFP	1
12750	QRFPR	1
12751	QRICH1	1
12752	QRICH2	1
12753	QRSL1	1
12754	QSER1	3.068604e-01
12755	QSOX1	1
12756	QSOX2	1
Done

Running MutSig 2:
Scatter job 141: processing genes 12666 - 12756
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
PTPRZ1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.172062e-02	ci left: 4.589796e-01	ci right 4.786386e-01	k: 4688	n:10000
Cons ci ratio: 3.531015e-02	ci left: 5.421894e-01	ci right 5.617803e-01	k: 5520	n:10000
KS ci ratio: 4.816114e-02	ci left: 3.887854e-01	ci right 4.080738e-01	k: 3984	n:10000
PTPRZ1   10000 perm   3 sec   (3543 perm/sec)   p_kst 3.984000e-01   p_cons 5.520000e-01   p_joint 4.688000e-01

Outputting figure to mutsig2_images.part000000000141/PTPRZ1.4_7068_10000_0.3984_0.552_0.4688.png
                gene_name: PTPRZ1
               theta_stop: 0.048 
                    nperm: 10000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 0.47 
     ci_joint_bounds_left: 0.46 
    ci_joint_bounds_right: 0.48 

Current progress: 12 percent done.
PZP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.329487e-02	ci left: 4.406142e-01	ci right 4.602147e-01	k: 4504	n:10000
Cons ci ratio: 2.429909e-02	ci left: 7.135091e-01	ci right 7.311612e-01	k: 7224	n:10000
KS ci ratio: 6.701956e-02	ci left: 2.462819e-01	ci right 2.634612e-01	k: 2548	n:10000
PZP   10000 perm   2 sec   (4433 perm/sec)   p_kst 2.548000e-01   p_cons 7.224000e-01   p_joint 4.504000e-01

Outputting figure to mutsig2_images.part000000000141/PZP.3_4593_10000_0.2548_0.7224_0.4504.png
                gene_name: PZP
               theta_stop: 0.067 
                    nperm: 10000 
                     p_ks: 0.25 
        ci_ks_bounds_left: 0.25 
       ci_ks_bounds_right: 0.26 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.45 
     ci_joint_bounds_left: 0.44 
    ci_joint_bounds_right: 0.46 

Current progress: 25 percent done.
PTPRD
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.271941e-02	ci left: 8.988792e-01	ci right 9.104838e-01	k: 9048	n:10000
Cons ci ratio: 5.092200e-02	ci left: 3.625152e-01	ci right 3.815594e-01	k: 3720	n:10000
KS ci ratio: 1.721807e-02	ci left: 8.309356e-01	ci right 8.454668e-01	k: 8383	n:10000
PTPRD   10000 perm   2 sec   (4035 perm/sec)   p_kst 8.383000e-01   p_cons 3.720000e-01   p_joint 9.048000e-01

Outputting figure to mutsig2_images.part000000000141/PTPRD.2_5947_10000_0.8383_0.372_0.9048.png
                gene_name: PTPRD
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.84 
        ci_ks_bounds_left: 0.83 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.90 
     ci_joint_bounds_left: 0.90 
    ci_joint_bounds_right: 0.91 

Current progress: 38 percent done.
PTPRO
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.557379e-02	ci left: 2.039253e-01	ci right 2.200428e-01	k: 2119	n:10000
KS ci ratio: 1.296142e-02	ci left: 8.954920e-01	ci right 9.072730e-01	k: 9015	n:10000
PTPRO   10000 perm   2 sec   (5274 perm/sec)   p_kst 9.015000e-01   p_cons 2.119000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000141/PTPRO.2_3755_10000_0.9015_0.2119_1.png
                gene_name: PTPRO
               theta_stop: 0.076 
                    nperm: 10000 
                     p_ks: 0.90 
        ci_ks_bounds_left: 0.90 
       ci_ks_bounds_right: 0.91 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.20 
     ci_cons_bounds_right: 0.22 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
PTPRS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.482064e-02	ci left: 7.048299e-01	ci right 7.226454e-01	k: 7138	n:10000
KS ci ratio: 9.000262e-03	ci left: 9.455455e-01	ci right 9.541901e-01	k: 9500	n:10000
PTPRS   10000 perm   2 sec   (4220 perm/sec)   p_kst 9.500000e-01   p_cons 7.138000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000141/PTPRS.2_5995_10000_0.95_0.7138_1.png
                gene_name: PTPRS
               theta_stop: 0.025 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.95 
                   p_cons: 0.71 
      ci_cons_bounds_left: 0.70 
     ci_cons_bounds_right: 0.72 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 62 percent done.
PVRL1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.834908e-02	ci left: 1.922969e-01	ci right 2.080782e-01	k: 2001	n:10000
Cons ci ratio: 6.293718e-02	ci left: 2.706208e-01	ci right 2.883078e-01	k: 2794	n:10000
KS ci ratio: 8.594478e-02	ci left: 1.647481e-01	ci right 1.796434e-01	k: 1721	n:10000
PVRL1   10000 perm   2 sec   (6050 perm/sec)   p_kst 1.721000e-01   p_cons 2.794000e-01   p_joint 2.001000e-01

Outputting figure to mutsig2_images.part000000000141/PVRL1.2_2024_10000_0.1721_0.2794_0.2001.png
                gene_name: PVRL1
               theta_stop: 0.086 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.16 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.20 
     ci_joint_bounds_left: 0.19 
    ci_joint_bounds_right: 0.21 

Current progress: 75 percent done.
PVRL4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.959510e+00	ci left: 6.187149e-05	ci right 8.764745e-04	k: 3	n:10000
Cons ci ratio: 5.408478e-02	ci left: 3.349839e-01	ci right 3.537069e-01	k: 3443	n:10000
KS ci ratio: 1.959510e+00	ci left: 6.187149e-05	ci right 8.764745e-04	k: 3	n:10000
PVRL4   10000 perm   2 sec   (6581 perm/sec)   p_kst 3.000000e-04   p_cons 3.443000e-01   p_joint 3.000000e-04

Joint ci ratio: 1.047271e+00	ci left: 3.461416e-04	ci right 1.111263e-03	k: 13	n:20000
Cons ci ratio: 3.850766e-02	ci left: 3.346775e-01	ci right 3.478687e-01	k: 6825	n:20000
KS ci ratio: 1.306340e+00	ci left: 1.727069e-04	ci right 7.880065e-04	k: 8	n:20000
PVRL4   20000 perm   4 sec   (5539 perm/sec)   p_kst 4.000000e-04   p_cons 3.412500e-01   p_joint 6.500000e-04

Joint ci ratio: 9.236603e-01	ci left: 3.301378e-04	ci right 9.071337e-04	k: 17	n:30000
Cons ci ratio: 3.149271e-02	ci left: 3.351699e-01	ci right 3.459277e-01	k: 10216	n:30000
KS ci ratio: 1.011870e+00	ci left: 2.551537e-04	ci right 7.828635e-04	k: 14	n:30000
PVRL4   30000 perm   6 sec   (5148 perm/sec)   p_kst 4.666667e-04   p_cons 3.405333e-01   p_joint 5.666667e-04

Joint ci ratio: 7.276527e-01	ci left: 4.651937e-04	ci right 1.011537e-03	k: 28	n:40000
Cons ci ratio: 2.723810e-02	ci left: 3.364782e-01	ci right 3.457949e-01	k: 13645	n:40000
KS ci ratio: 8.355065e-01	ci left: 3.250117e-04	ci right 8.024069e-04	k: 21	n:40000
PVRL4   40000 perm   8 sec   (4913 perm/sec)   p_kst 5.250000e-04   p_cons 3.411250e-01   p_joint 7.000000e-04

Joint ci ratio: 4.821953e-01	ci left: 1.003451e-03	ci right 1.656661e-03	k: 65	n:50000
Cons ci ratio: 2.442822e-02	ci left: 3.357675e-01	ci right 3.440911e-01	k: 16996	n:50000
KS ci ratio: 7.277073e-01	ci left: 3.721472e-04	ci right 8.092550e-04	k: 28	n:50000
PVRL4   50000 perm   10 sec   (4833 perm/sec)   p_kst 5.600000e-04   p_cons 3.399200e-01   p_joint 1.300000e-03

Joint ci ratio: 4.716372e-01	ci left: 8.801818e-04	ci right 1.436552e-03	k: 68	n:60000
Cons ci ratio: 2.230014e-02	ci left: 3.361260e-01	ci right 3.437228e-01	k: 20395	n:60000
KS ci ratio: 6.531319e-01	ci left: 4.063456e-04	ci right 8.111830e-04	k: 35	n:60000
PVRL4   60000 perm   13 sec   (4700 perm/sec)   p_kst 5.833333e-04   p_cons 3.399167e-01   p_joint 1.133333e-03

Joint ci ratio: 4.682920e-01	ci left: 7.670230e-04	ci right 1.247321e-03	k: 69	n:70000
Cons ci ratio: 2.064811e-02	ci left: 3.363621e-01	ci right 3.433941e-01	k: 23791	n:70000
KS ci ratio: 6.120175e-01	ci left: 4.082673e-04	ci right 7.780431e-04	k: 40	n:70000
PVRL4   70000 perm   15 sec   (4601 perm/sec)   p_kst 5.714286e-04   p_cons 3.398714e-01   p_joint 9.857143e-04

Joint ci ratio: 5.145314e-01	ci left: 5.396838e-04	ci right 9.230292e-04	k: 57	n:80000
Cons ci ratio: 1.937595e-02	ci left: 3.351707e-01	ci right 3.417410e-01	k: 27076	n:80000
KS ci ratio: 5.778027e-01	ci left: 4.103200e-04	ci right 7.525977e-04	k: 45	n:80000
PVRL4   80000 perm   18 sec   (4540 perm/sec)   p_kst 5.625000e-04   p_cons 3.384500e-01   p_joint 7.125000e-04

Joint ci ratio: 4.200626e-01	ci left: 7.643900e-04	ci right 1.179971e-03	k: 86	n:90000
Cons ci ratio: 1.829625e-02	ci left: 3.346654e-01	ci right 3.408562e-01	k: 30398	n:90000
KS ci ratio: 5.487512e-01	ci left: 4.123713e-04	ci right 7.323660e-04	k: 50	n:90000
PVRL4   90000 perm   20 sec   (4473 perm/sec)   p_kst 5.555556e-04   p_cons 3.377556e-01   p_joint 9.555556e-04

Joint ci ratio: 3.576288e-01	ci left: 9.859121e-04	ci right 1.423846e-03	k: 119	n:100000
Cons ci ratio: 1.734519e-02	ci left: 3.351378e-01	ci right 3.410116e-01	k: 33807	n:100000
KS ci ratio: 5.190661e-01	ci left: 4.230448e-04	ci right 7.271458e-04	k: 56	n:100000
PVRL4   100000 perm   23 sec   (4386 perm/sec)   p_kst 5.600000e-04   p_cons 3.380700e-01   p_joint 1.190000e-03

Joint ci ratio: 3.397000e-01	ci left: 1.004124e-03	ci right 1.422888e-03	k: 132	n:110000
Cons ci ratio: 1.653960e-02	ci left: 3.352316e-01	ci right 3.408315e-01	k: 37183	n:110000
KS ci ratio: 4.937299e-01	ci left: 4.321632e-04	ci right 7.224990e-04	k: 62	n:110000
PVRL4   110000 perm   26 sec   (4300 perm/sec)   p_kst 5.636364e-04   p_cons 3.380273e-01   p_joint 1.200000e-03

Joint ci ratio: 3.532718e-01	ci left: 8.443495e-04	ci right 1.213782e-03	k: 122	n:120000
Cons ci ratio: 1.581407e-02	ci left: 3.359555e-01	ci right 3.413190e-01	k: 40636	n:120000
KS ci ratio: 4.823839e-01	ci left: 4.180710e-04	ci right 6.903473e-04	k: 65	n:120000
PVRL4   120000 perm   28 sec   (4226 perm/sec)   p_kst 5.416667e-04   p_cons 3.386333e-01   p_joint 1.016667e-03

Joint ci ratio: 3.372034e-01	ci left: 8.637093e-04	ci right 1.220689e-03	k: 134	n:130000
Cons ci ratio: 1.519717e-02	ci left: 3.359582e-01	ci right 3.411105e-01	k: 44009	n:130000
KS ci ratio: 4.555593e-01	ci left: 4.401815e-04	ci right 7.059993e-04	k: 73	n:130000
PVRL4   130000 perm   31 sec   (4162 perm/sec)   p_kst 5.615385e-04   p_cons 3.385308e-01   p_joint 1.030769e-03

Joint ci ratio: 3.220505e-01	ci left: 8.871945e-04	ci right 1.234005e-03	k: 147	n:140000
Cons ci ratio: 1.527244e-02	ci left: 3.175424e-01	ci right 3.224365e-01	k: 44798	n:140000
KS ci ratio: 4.327632e-01	ci left: 4.594950e-04	ci right 7.190609e-04	k: 81	n:140000
PVRL4   140000 perm   34 sec   (4097 perm/sec)   p_kst 5.785714e-04   p_cons 3.199857e-01   p_joint 1.050000e-03

Joint ci ratio: 3.040816e-01	ci left: 9.386321e-04	ci right 1.281122e-03	k: 165	n:150000
Cons ci ratio: 1.477425e-02	ci left: 3.170474e-01	ci right 3.217730e-01	k: 47911	n:150000
KS ci ratio: 4.063577e-01	ci left: 4.944610e-04	ci right 7.521467e-04	k: 92	n:150000
PVRL4   150000 perm   37 sec   (4032 perm/sec)   p_kst 6.133333e-04   p_cons 3.194067e-01   p_joint 1.100000e-03

Joint ci ratio: 2.238764e-01	ci left: 1.698468e-03	ci right 2.132399e-03	k: 305	n:160000
Cons ci ratio: 1.429507e-02	ci left: 3.174275e-01	ci right 3.220040e-01	k: 51154	n:160000
KS ci ratio: 3.861235e-01	ci left: 5.198340e-04	ci right 7.738287e-04	k: 102	n:160000
PVRL4   160000 perm   40 sec   (3970 perm/sec)   p_kst 6.375000e-04   p_cons 3.197125e-01   p_joint 1.906250e-03

Joint ci ratio: 2.555351e-01	ci left: 1.205843e-03	ci right 1.564449e-03	k: 234	n:170000
Cons ci ratio: 1.386491e-02	ci left: 3.176007e-01	ci right 3.220408e-01	k: 54369	n:170000
KS ci ratio: 3.736353e-01	ci left: 5.265013e-04	ci right 7.733985e-04	k: 109	n:170000
PVRL4   170000 perm   44 sec   (3906 perm/sec)   p_kst 6.411765e-04   p_cons 3.198176e-01   p_joint 1.376471e-03

Joint ci ratio: 3.210051e-01	ci left: 6.951357e-04	ci right 9.658030e-04	k: 148	n:180000
Cons ci ratio: 1.347259e-02	ci left: 3.177176e-01	ci right 3.220326e-01	k: 57577	n:180000
KS ci ratio: 3.670243e-01	ci left: 5.174049e-04	ci right 7.547141e-04	k: 113	n:180000
PVRL4   180000 perm   47 sec   (3848 perm/sec)   p_kst 6.277778e-04   p_cons 3.198722e-01   p_joint 8.222222e-04

Joint ci ratio: 3.097719e-01	ci left: 7.118644e-04	ci right 9.774310e-04	k: 159	n:190000
Cons ci ratio: 1.310593e-02	ci left: 3.180182e-01	ci right 3.222188e-01	k: 60822	n:190000
KS ci ratio: 3.519106e-01	ci left: 5.380545e-04	ci right 7.723539e-04	k: 123	n:190000
PVRL4   190000 perm   50 sec   (3788 perm/sec)   p_kst 6.473684e-04   p_cons 3.201158e-01   p_joint 8.368421e-04

Joint ci ratio: 3.023068e-01	ci left: 7.132003e-04	ci right 9.716212e-04	k: 167	n:200000
Cons ci ratio: 1.277617e-02	ci left: 3.180007e-01	ci right 3.220946e-01	k: 64009	n:200000
KS ci ratio: 3.463706e-01	ci left: 5.293975e-04	ci right 7.554840e-04	k: 127	n:200000
PVRL4   200000 perm   54 sec   (3730 perm/sec)   p_kst 6.350000e-04   p_cons 3.200450e-01   p_joint 8.350000e-04

Joint ci ratio: 2.936912e-01	ci left: 7.232989e-04	ci right 9.765208e-04	k: 177	n:210000
Cons ci ratio: 1.248253e-02	ci left: 3.175534e-01	ci right 3.215468e-01	k: 67105	n:210000
KS ci ratio: 3.372706e-01	ci left: 5.346609e-04	ci right 7.556917e-04	k: 134	n:210000
PVRL4   210000 perm   57 sec   (3674 perm/sec)   p_kst 6.380952e-04   p_cons 3.195476e-01   p_joint 8.428571e-04

Joint ci ratio: 1.908658e-01	ci left: 1.731005e-03	ci right 2.100497e-03	k: 420	n:220000
Cons ci ratio: 1.218962e-02	ci left: 3.178103e-01	ci right 3.217126e-01	k: 70347	n:220000
KS ci ratio: 3.288522e-01	ci left: 5.395164e-04	ci right 7.558108e-04	k: 141	n:220000
PVRL4   220000 perm   61 sec   (3620 perm/sec)   p_kst 6.409091e-04   p_cons 3.197591e-01   p_joint 1.909091e-03

Joint ci ratio: 1.854369e-01	ci left: 1.759323e-03	ci right 2.122977e-03	k: 445	n:230000
Cons ci ratio: 1.192843e-02	ci left: 3.176075e-01	ci right 3.214231e-01	k: 73488	n:230000
KS ci ratio: 3.178482e-01	ci left: 5.560104e-04	ci right 7.699425e-04	k: 151	n:230000
PVRL4   230000 perm   64 sec   (3566 perm/sec)   p_kst 6.565217e-04   p_cons 3.195130e-01   p_joint 1.934783e-03

Joint ci ratio: 2.730015e-01	ci left: 7.412753e-04	ci right 9.793788e-04	k: 205	n:240000
Cons ci ratio: 1.167048e-02	ci left: 3.179009e-01	ci right 3.216368e-01	k: 76744	n:240000
KS ci ratio: 3.147596e-01	ci left: 5.443505e-04	ci right 7.513516e-04	k: 154	n:240000
PVRL4   240000 perm   68 sec   (3514 perm/sec)   p_kst 6.416667e-04   p_cons 3.197667e-01   p_joint 8.541667e-04

Joint ci ratio: 2.672263e-01	ci left: 7.451869e-04	ci right 9.786353e-04	k: 214	n:250000
Cons ci ratio: 1.144286e-02	ci left: 3.176284e-01	ci right 3.212878e-01	k: 79864	n:250000
KS ci ratio: 3.107767e-01	ci left: 5.373204e-04	ci right 7.385499e-04	k: 158	n:250000
PVRL4   250000 perm   72 sec   (3465 perm/sec)   p_kst 6.320000e-04   p_cons 3.194560e-01   p_joint 8.560000e-04

Joint ci ratio: 2.606407e-01	ci left: 7.560355e-04	ci right 9.860948e-04	k: 225	n:260000
Cons ci ratio: 1.122359e-02	ci left: 3.175503e-01	ci right 3.211383e-01	k: 83029	n:260000
KS ci ratio: 3.032407e-01	ci left: 5.450540e-04	ci right 7.432755e-04	k: 166	n:260000
PVRL4   260000 perm   76 sec   (3413 perm/sec)   p_kst 6.384615e-04   p_cons 3.193423e-01   p_joint 8.653846e-04

Joint ci ratio: 2.556008e-01	ci left: 7.592113e-04	ci right 9.850577e-04	k: 234	n:270000
Cons ci ratio: 1.101148e-02	ci left: 3.176747e-01	ci right 3.211958e-01	k: 86247	n:270000
KS ci ratio: 2.962276e-01	ci left: 5.522692e-04	ci right 7.475972e-04	k: 174	n:270000
PVRL4   270000 perm   80 sec   (3364 perm/sec)   p_kst 6.444444e-04   p_cons 3.194333e-01   p_joint 8.666667e-04

Joint ci ratio: 2.518778e-01	ci left: 7.555067e-04	ci right 9.764638e-04	k: 241	n:280000
Cons ci ratio: 1.080954e-02	ci left: 3.178479e-01	ci right 3.213059e-01	k: 89481	n:280000
KS ci ratio: 2.912766e-01	ci left: 5.523951e-04	ci right 7.439003e-04	k: 180	n:280000
PVRL4   280000 perm   84 sec   (3320 perm/sec)   p_kst 6.428571e-04   p_cons 3.195750e-01   p_joint 8.607143e-04

Joint ci ratio: 2.159936e-01	ci left: 1.011989e-03	ci right 1.260222e-03	k: 328	n:290000
Cons ci ratio: 1.062387e-02	ci left: 3.177824e-01	ci right 3.211799e-01	k: 92649	n:290000
KS ci ratio: 2.842930e-01	ci left: 5.621423e-04	ci right 7.515162e-04	k: 189	n:290000
PVRL4   290000 perm   88 sec   (3277 perm/sec)   p_kst 6.517241e-04   p_cons 3.194793e-01   p_joint 1.131034e-03

Joint ci ratio: 2.137334e-01	ci left: 1.000334e-03	ci right 1.242803e-03	k: 335	n:300000
Cons ci ratio: 1.044305e-02	ci left: 3.179048e-01	ci right 3.212454e-01	k: 95872	n:300000
KS ci ratio: 2.806253e-01	ci left: 5.588903e-04	ci right 7.443100e-04	k: 194	n:300000
PVRL4   300000 perm   93 sec   (3231 perm/sec)   p_kst 6.466667e-04   p_cons 3.195733e-01   p_joint 1.116667e-03

Joint ci ratio: 2.232514e-01	ci left: 8.826764e-04	ci right 1.107465e-03	k: 307	n:310000
Cons ci ratio: 1.027550e-02	ci left: 3.178361e-01	ci right 3.211221e-01	k: 99038	n:310000
KS ci ratio: 2.770960e-01	ci left: 5.558627e-04	ci right 7.375542e-04	k: 199	n:310000
PVRL4   310000 perm   97 sec   (3190 perm/sec)   p_kst 6.419355e-04   p_cons 3.194774e-01   p_joint 9.903226e-04

Joint ci ratio: 2.214628e-01	ci left: 8.698469e-04	ci right 1.089352e-03	k: 312	n:320000
Cons ci ratio: 1.011497e-02	ci left: 3.178065e-01	ci right 3.210405e-01	k: 102215	n:320000
KS ci ratio: 2.743670e-01	ci left: 5.501276e-04	ci right 7.278681e-04	k: 203	n:320000
PVRL4   320000 perm   102 sec   (3149 perm/sec)   p_kst 6.343750e-04   p_cons 3.194219e-01   p_joint 9.750000e-04

Joint ci ratio: 2.329195e-01	ci left: 7.577439e-04	ci right 9.602777e-04	k: 282	n:330000
Cons ci ratio: 9.956803e-03	ci left: 3.179939e-01	ci right 3.211789e-01	k: 105463	n:330000
KS ci ratio: 2.710658e-01	ci left: 5.475725e-04	ci right 7.219966e-04	k: 208	n:330000
PVRL4   330000 perm   106 sec   (3109 perm/sec)   p_kst 6.303030e-04   p_cons 3.195848e-01   p_joint 8.545455e-04

Joint ci ratio: 2.300918e-01	ci left: 7.548514e-04	ci right 9.538146e-04	k: 289	n:340000
Cons ci ratio: 9.812796e-03	ci left: 3.178623e-01	ci right 3.209996e-01	k: 108606	n:340000
KS ci ratio: 2.685094e-01	ci left: 5.424363e-04	ci right 7.133203e-04	k: 212	n:340000
PVRL4   340000 perm   111 sec   (3070 perm/sec)   p_kst 6.235294e-04   p_cons 3.194294e-01   p_joint 8.500000e-04

Joint ci ratio: 2.109414e-01	ci left: 8.817699e-04	ci right 1.092347e-03	k: 344	n:350000
Cons ci ratio: 9.671999e-03	ci left: 3.178668e-01	ci right 3.209590e-01	k: 111794	n:350000
KS ci ratio: 2.606699e-01	ci left: 5.616187e-04	ci right 7.325390e-04	k: 225	n:350000
PVRL4   350000 perm   115 sec   (3032 perm/sec)   p_kst 6.428571e-04   p_cons 3.194114e-01   p_joint 9.828571e-04

Joint ci ratio: 2.204201e-01	ci left: 7.810654e-04	ci right 9.771122e-04	k: 315	n:360000
Cons ci ratio: 9.535815e-03	ci left: 3.179297e-01	ci right 3.209787e-01	k: 115003	n:360000
KS ci ratio: 2.556288e-01	ci left: 5.694011e-04	ci right 7.388042e-04	k: 234	n:360000
PVRL4   360000 perm   120 sec   (2995 perm/sec)   p_kst 6.500000e-04   p_cons 3.194528e-01   p_joint 8.750000e-04

Joint ci ratio: 2.183577e-01	ci left: 7.752804e-04	ci right 9.678100e-04	k: 321	n:370000
Cons ci ratio: 9.403822e-03	ci left: 3.180543e-01	ci right 3.210620e-01	k: 118236	n:370000
KS ci ratio: 2.534815e-01	ci left: 5.641328e-04	ci right 7.303359e-04	k: 238	n:370000
PVRL4   370000 perm   125 sec   (2959 perm/sec)   p_kst 6.432432e-04   p_cons 3.195568e-01   p_joint 8.675676e-04

Joint ci ratio: 2.017898e-01	ci left: 8.920179e-04	ci right 1.094663e-03	k: 376	n:380000
Cons ci ratio: 9.278454e-03	ci left: 3.181121e-01	ci right 3.210801e-01	k: 121446	n:380000
KS ci ratio: 2.503585e-01	ci left: 5.640798e-04	ci right 7.279008e-04	k: 244	n:380000
PVRL4   380000 perm   130 sec   (2923 perm/sec)   p_kst 6.421053e-04   p_cons 3.195947e-01   p_joint 9.894737e-04

Joint ci ratio: 1.991657e-01	ci left: 8.934997e-04	ci right 1.093521e-03	k: 386	n:390000
Cons ci ratio: 9.157916e-03	ci left: 3.181698e-01	ci right 3.210995e-01	k: 124657	n:390000
KS ci ratio: 2.483403e-01	ci left: 5.592316e-04	ci right 7.201330e-04	k: 248	n:390000
PVRL4   390000 perm   135 sec   (2888 perm/sec)   p_kst 6.358974e-04   p_cons 3.196333e-01   p_joint 9.897436e-04

Joint ci ratio: 1.983999e-01	ci left: 8.782882e-04	ci right 1.074057e-03	k: 389	n:400000
Cons ci ratio: 9.041021e-03	ci left: 3.182698e-01	ci right 3.211628e-01	k: 127886	n:400000
KS ci ratio: 2.473503e-01	ci left: 5.499399e-04	ci right 7.074401e-04	k: 250	n:400000
PVRL4   400000 perm   140 sec   (2854 perm/sec)   p_kst 6.250000e-04   p_cons 3.197150e-01   p_joint 9.725000e-04

Joint ci ratio: 1.959041e-01	ci left: 8.800529e-04	ci right 1.073453e-03	k: 399	n:410000
Cons ci ratio: 8.929542e-03	ci left: 3.183140e-01	ci right 3.211715e-01	k: 131094	n:410000
KS ci ratio: 2.439714e-01	ci left: 5.525491e-04	ci right 7.083074e-04	k: 257	n:410000
PVRL4   410000 perm   145 sec   (2819 perm/sec)   p_kst 6.268293e-04   p_cons 3.197415e-01   p_joint 9.731707e-04

Joint ci ratio: 1.373471e-01	ci left: 1.802741e-03	ci right 2.070871e-03	k: 812	n:420000
Cons ci ratio: 8.825807e-03	ci left: 3.181731e-01	ci right 3.209960e-01	k: 134225	n:420000
KS ci ratio: 2.416416e-01	ci left: 5.505736e-04	ci right 7.040707e-04	k: 262	n:420000
PVRL4   420000 perm   151 sec   (2785 perm/sec)   p_kst 6.238095e-04   p_cons 3.195833e-01   p_joint 1.933333e-03

Joint ci ratio: 1.914110e-01	ci left: 8.811643e-04	ci right 1.069850e-03	k: 418	n:430000
Cons ci ratio: 8.720566e-03	ci left: 3.182899e-01	ci right 3.210800e-01	k: 137464	n:430000
KS ci ratio: 2.371736e-01	ci left: 5.596309e-04	ci right 7.123446e-04	k: 272	n:430000
PVRL4   430000 perm   156 sec   (2749 perm/sec)   p_kst 6.325581e-04   p_cons 3.196837e-01   p_joint 9.720930e-04

Joint ci ratio: 1.338523e-01	ci left: 1.815212e-03	ci right 2.077780e-03	k: 855	n:440000
Cons ci ratio: 8.618596e-03	ci left: 3.184220e-01	ci right 3.211804e-01	k: 140712	n:440000
KS ci ratio: 2.354556e-01	ci left: 5.554645e-04	ci right 7.057834e-04	k: 276	n:440000
PVRL4   440000 perm   162 sec   (2717 perm/sec)   p_kst 6.272727e-04   p_cons 3.198000e-01   p_joint 1.943182e-03

Joint ci ratio: 1.878585e-01	ci left: 8.758689e-04	ci right 1.059543e-03	k: 434	n:450000
Cons ci ratio: 8.523167e-03	ci left: 3.183930e-01	ci right 3.211205e-01	k: 143890	n:450000
KS ci ratio: 2.333592e-01	ci left: 5.535794e-04	ci right 7.018619e-04	k: 281	n:450000
PVRL4   450000 perm   168 sec   (2684 perm/sec)   p_kst 6.244444e-04   p_cons 3.197556e-01   p_joint 9.644444e-04

Joint ci ratio: 1.857357e-01	ci left: 8.775509e-04	ci right 1.059264e-03	k: 444	n:460000
Cons ci ratio: 8.427681e-03	ci left: 3.185282e-01	ci right 3.212262e-01	k: 147143	n:460000
KS ci ratio: 2.309156e-01	ci left: 5.538300e-04	ci right 7.004047e-04	k: 287	n:460000
PVRL4   460000 perm   173 sec   (2654 perm/sec)   p_kst 6.239130e-04   p_cons 3.198761e-01   p_joint 9.652174e-04

Joint ci ratio: 1.286921e-01	ci left: 1.843396e-03	ci right 2.098977e-03	k: 925	n:470000
Cons ci ratio: 8.337534e-03	ci left: 3.185432e-01	ci right 3.212122e-01	k: 150342	n:470000
KS ci ratio: 2.262488e-01	ci left: 5.661169e-04	ci right 7.124932e-04	k: 299	n:470000
PVRL4   470000 perm   179 sec   (2624 perm/sec)   p_kst 6.361702e-04   p_cons 3.198766e-01   p_joint 1.968085e-03

Joint ci ratio: 1.272570e-01	ci left: 1.847341e-03	ci right 2.100397e-03	k: 946	n:480000
Cons ci ratio: 8.250377e-03	ci left: 3.185493e-01	ci right 3.211904e-01	k: 153537	n:480000
KS ci ratio: 2.236544e-01	ci left: 5.680845e-04	ci right 7.130532e-04	k: 306	n:480000
PVRL4   480000 perm   185 sec   (2595 perm/sec)   p_kst 6.375000e-04   p_cons 3.198687e-01   p_joint 1.970833e-03

Joint ci ratio: 1.259341e-01	ci left: 1.849164e-03	ci right 2.099640e-03	k: 966	n:490000
Cons ci ratio: 8.165400e-03	ci left: 3.185818e-01	ci right 3.211958e-01	k: 156745	n:490000
KS ci ratio: 2.204459e-01	ci left: 5.738370e-04	ci right 7.178881e-04	k: 315	n:490000
PVRL4   490000 perm   191 sec   (2567 perm/sec)   p_kst 6.428571e-04   p_cons 3.198878e-01   p_joint 1.971429e-03

Joint ci ratio: 1.243993e-01	ci left: 1.858678e-03	ci right 2.107149e-03	k: 990	n:500000
Cons ci ratio: 8.084407e-03	ci left: 3.185372e-01	ci right 3.211248e-01	k: 159915	n:500000
KS ci ratio: 2.177070e-01	ci left: 5.774825e-04	ci right 7.204067e-04	k: 323	n:500000
PVRL4   500000 perm   197 sec   (2540 perm/sec)   p_kst 6.460000e-04   p_cons 3.198300e-01   p_joint 1.980000e-03

Joint ci ratio: 1.228587e-01	ci left: 1.869738e-03	ci right 2.116366e-03	k: 1015	n:510000
Cons ci ratio: 8.006752e-03	ci left: 3.184417e-01	ci right 3.210035e-01	k: 163058	n:510000
KS ci ratio: 2.137829e-01	ci left: 5.884178e-04	ci right 7.310793e-04	k: 335	n:510000
PVRL4   510000 perm   203 sec   (2511 perm/sec)   p_kst 6.568627e-04   p_cons 3.197216e-01   p_joint 1.990196e-03

Joint ci ratio: 1.212572e-01	ci left: 1.884120e-03	ci right 2.129174e-03	k: 1042	n:520000
Cons ci ratio: 7.931187e-03	ci left: 3.183556e-01	ci right 3.208925e-01	k: 166204	n:520000
KS ci ratio: 2.112821e-01	ci left: 5.916680e-04	ci right 7.332222e-04	k: 343	n:520000
PVRL4   520000 perm   209 sec   (2483 perm/sec)   p_kst 6.596154e-04   p_cons 3.196231e-01   p_joint 2.003846e-03

Joint ci ratio: 1.199416e-01	ci left: 1.890658e-03	ci right 2.133705e-03	k: 1065	n:530000
Cons ci ratio: 7.858846e-03	ci left: 3.182108e-01	ci right 3.207233e-01	k: 169317	n:530000
KS ci ratio: 2.094634e-01	ci left: 5.912288e-04	ci right 7.313042e-04	k: 349	n:530000
PVRL4   530000 perm   216 sec   (2457 perm/sec)   p_kst 6.584906e-04   p_cons 3.194660e-01   p_joint 2.009434e-03

Joint ci ratio: 1.191071e-01	ci left: 1.882593e-03	ci right 2.122800e-03	k: 1080	n:540000
Cons ci ratio: 7.785761e-03	ci left: 3.182212e-01	ci right 3.207103e-01	k: 172511	n:540000
KS ci ratio: 2.085721e-01	ci left: 5.855447e-04	ci right 7.236077e-04	k: 352	n:540000
PVRL4   540000 perm   222 sec   (2432 perm/sec)   p_kst 6.518519e-04   p_cons 3.194648e-01   p_joint 2.000000e-03

Joint ci ratio: 1.183981e-01	ci left: 1.871298e-03	ci right 2.108543e-03	k: 1093	n:550000
Cons ci ratio: 7.715550e-03	ci left: 3.181824e-01	ci right 3.206486e-01	k: 175678	n:550000
KS ci ratio: 2.079847e-01	ci left: 5.783449e-04	ci right 7.142773e-04	k: 354	n:550000
PVRL4   550000 perm   228 sec   (2408 perm/sec)   p_kst 6.436364e-04   p_cons 3.194145e-01   p_joint 1.987273e-03

Joint ci ratio: 1.171725e-01	ci left: 1.877743e-03	ci right 2.113171e-03	k: 1116	n:560000
Cons ci ratio: 7.645979e-03	ci left: 3.182146e-01	ci right 3.206587e-01	k: 178884	n:560000
KS ci ratio: 2.059638e-01	ci left: 5.798695e-04	ci right 7.146692e-04	k: 361	n:560000
PVRL4   560000 perm   235 sec   (2383 perm/sec)   p_kst 6.446429e-04   p_cons 3.194357e-01   p_joint 1.992857e-03

Joint ci ratio: 1.159841e-01	ci left: 1.883975e-03	ci right 2.117624e-03	k: 1139	n:570000
Cons ci ratio: 7.580826e-03	ci left: 3.180985e-01	ci right 3.205209e-01	k: 182006	n:570000
KS ci ratio: 2.045563e-01	ci left: 5.780174e-04	ci right 7.113534e-04	k: 366	n:570000
PVRL4   570000 perm   242 sec   (2355 perm/sec)   p_kst 6.421053e-04   p_cons 3.193088e-01   p_joint 1.998246e-03

Joint ci ratio: 1.154295e-01	ci left: 1.869908e-03	ci right 2.100629e-03	k: 1150	n:580000
Cons ci ratio: 7.514507e-03	ci left: 3.181485e-01	ci right 3.205499e-01	k: 185222	n:580000
KS ci ratio: 2.031772e-01	ci left: 5.762321e-04	ci right 7.081490e-04	k: 371	n:580000
PVRL4   580000 perm   249 sec   (2332 perm/sec)   p_kst 6.396552e-04   p_cons 3.193483e-01   p_joint 1.982759e-03

Joint ci ratio: 1.145375e-01	ci left: 1.867846e-03	ci right 2.096410e-03	k: 1168	n:590000
Cons ci ratio: 7.448883e-03	ci left: 3.182561e-01	ci right 3.206372e-01	k: 188473	n:590000
KS ci ratio: 2.015583e-01	ci left: 5.761197e-04	ci right 7.068306e-04	k: 377	n:590000
PVRL4   590000 perm   256 sec   (2309 perm/sec)   p_kst 6.389831e-04   p_cons 3.194458e-01   p_joint 1.979661e-03

Joint ci ratio: 1.130946e-01	ci left: 1.885293e-03	ci right 2.112892e-03	k: 1198	n:600000
Cons ci ratio: 7.385288e-03	ci left: 3.183402e-01	ci right 3.207016e-01	k: 191712	n:600000
KS ci ratio: 2.002385e-01	ci left: 5.744318e-04	ci right 7.038021e-04	k: 382	n:600000
PVRL4   600000 perm   262 sec   (2286 perm/sec)   p_kst 6.366667e-04   p_cons 3.195200e-01   p_joint 1.996667e-03

Joint ci ratio: 1.120709e-01	ci left: 1.889437e-03	ci right 2.115335e-03	k: 1220	n:610000
Cons ci ratio: 7.325005e-03	ci left: 3.183201e-01	ci right 3.206620e-01	k: 194889	n:610000
KS ci ratio: 1.986883e-01	ci left: 5.743597e-04	ci right 7.025910e-04	k: 388	n:610000
PVRL4   610000 perm   269 sec   (2265 perm/sec)   p_kst 6.360656e-04   p_cons 3.194902e-01   p_joint 2.000000e-03

Joint ci ratio: 1.111193e-01	ci left: 1.891887e-03	ci right 2.116032e-03	k: 1241	n:620000
Cons ci ratio: 7.265690e-03	ci left: 3.183297e-01	ci right 3.206526e-01	k: 198084	n:620000
KS ci ratio: 1.976750e-01	ci left: 5.712272e-04	ci right 6.980304e-04	k: 392	n:620000
PVRL4   620000 perm   276 sec   (2244 perm/sec)   p_kst 6.322581e-04   p_cons 3.194903e-01   p_joint 2.001613e-03

Joint ci ratio: 1.559744e-01	ci left: 9.234619e-04	ci right 1.081185e-03	k: 630	n:630000
Cons ci ratio: 7.207215e-03	ci left: 3.183740e-01	ci right 3.206784e-01	k: 201301	n:630000
KS ci ratio: 1.966770e-01	ci left: 5.681958e-04	ci right 6.936129e-04	k: 396	n:630000
PVRL4   630000 perm   284 sec   (2220 perm/sec)   p_kst 6.285714e-04   p_cons 3.195254e-01   p_joint 1.000000e-03

Joint ci ratio: 1.553607e-01	ci left: 9.165407e-04	ci right 1.072408e-03	k: 635	n:640000
Cons ci ratio: 7.151130e-03	ci left: 3.183561e-01	ci right 3.206424e-01	k: 204479	n:640000
KS ci ratio: 1.959386e-01	ci left: 5.637747e-04	ci right 6.876930e-04	k: 399	n:640000
PVRL4   640000 perm   291 sec   (2200 perm/sec)   p_kst 6.234375e-04   p_cons 3.194984e-01   p_joint 9.921875e-04

Joint ci ratio: 1.546335e-01	ci left: 9.113127e-04	ci right 1.065498e-03	k: 641	n:650000
Cons ci ratio: 7.096411e-03	ci left: 3.183342e-01	ci right 3.206028e-01	k: 207654	n:650000
KS ci ratio: 1.949665e-01	ci left: 5.609539e-04	ci right 6.835678e-04	k: 403	n:650000
PVRL4   650000 perm   298 sec   (2180 perm/sec)   p_kst 6.200000e-04   p_cons 3.194677e-01   p_joint 9.861538e-04

Joint ci ratio: 1.534431e-01	ci left: 9.120724e-04	ci right 1.065089e-03	k: 651	n:660000
Cons ci ratio: 7.042069e-03	ci left: 3.183660e-01	ci right 3.206174e-01	k: 210864	n:660000
KS ci ratio: 1.935347e-01	ci left: 5.611034e-04	ci right 6.827432e-04	k: 409	n:660000
PVRL4   660000 perm   306 sec   (2160 perm/sec)   p_kst 6.196970e-04   p_cons 3.194909e-01   p_joint 9.863636e-04

Joint ci ratio: 1.519355e-01	ci left: 9.171213e-04	ci right 1.069336e-03	k: 664	n:670000
Cons ci ratio: 6.988645e-03	ci left: 3.184163e-01	ci right 3.206509e-01	k: 214087	n:670000
KS ci ratio: 1.919033e-01	ci left: 5.626724e-04	ci right 6.835042e-04	k: 416	n:670000
PVRL4   670000 perm   313 sec   (2141 perm/sec)   p_kst 6.208955e-04   p_cons 3.195328e-01   p_joint 9.910448e-04

Joint ci ratio: 1.501394e-01	ci left: 9.262747e-04	ci right 1.078028e-03	k: 680	n:680000
Cons ci ratio: 6.935739e-03	ci left: 3.185078e-01	ci right 3.207260e-01	k: 217339	n:680000
KS ci ratio: 1.894206e-01	ci left: 5.698024e-04	ci right 6.904001e-04	k: 427	n:680000
PVRL4   680000 perm   320 sec   (2122 perm/sec)   p_kst 6.279412e-04   p_cons 3.196162e-01   p_joint 1.000000e-03

Joint ci ratio: 1.492654e-01	ci left: 9.240103e-04	ci right 1.074433e-03	k: 688	n:690000
Cons ci ratio: 6.885668e-03	ci left: 3.184925e-01	ci right 3.206945e-01	k: 220519	n:690000
KS ci ratio: 1.883239e-01	ci left: 5.684481e-04	ci right 6.879830e-04	k: 432	n:690000
PVRL4   690000 perm   328 sec   (2103 perm/sec)   p_kst 6.260870e-04   p_cons 3.195928e-01   p_joint 9.971014e-04

Joint ci ratio: 1.479821e-01	ci left: 9.273156e-04	ci right 1.076863e-03	k: 700	n:700000
Cons ci ratio: 6.835947e-03	ci left: 3.185233e-01	ci right 3.207096e-01	k: 223731	n:700000
KS ci ratio: 1.866077e-01	ci left: 5.712198e-04	ci right 6.901188e-04	k: 440	n:700000
PVRL4   700000 perm   336 sec   (2084 perm/sec)   p_kst 6.285714e-04   p_cons 3.196157e-01   p_joint 1.000000e-03

Joint ci ratio: 1.474577e-01	ci left: 9.210366e-04	ci right 1.068999e-03	k: 705	n:710000
Cons ci ratio: 6.788123e-03	ci left: 3.184999e-01	ci right 3.206706e-01	k: 226905	n:710000
KS ci ratio: 1.855589e-01	ci left: 5.698886e-04	ci right 6.877688e-04	k: 445	n:710000
PVRL4   710000 perm   344 sec   (2065 perm/sec)   p_kst 6.267606e-04   p_cons 3.195845e-01   p_joint 9.929577e-04

Joint ci ratio: 1.464243e-01	ci left: 9.216227e-04	ci right 1.068551e-03	k: 715	n:720000
Cons ci ratio: 6.741009e-03	ci left: 3.184952e-01	ci right 3.206507e-01	k: 230092	n:720000
KS ci ratio: 1.843233e-01	ci left: 5.699210e-04	ci right 6.869352e-04	k: 451	n:720000
PVRL4   720000 perm   352 sec   (2047 perm/sec)   p_kst 6.263889e-04   p_cons 3.195722e-01   p_joint 9.930556e-04

Joint ci ratio: 1.457141e-01	ci left: 9.182362e-04	ci right 1.063853e-03	k: 722	n:730000
Cons ci ratio: 6.695179e-03	ci left: 3.184701e-01	ci right 3.206108e-01	k: 233264	n:730000
KS ci ratio: 1.833123e-01	ci left: 5.686480e-04	ci right 6.846893e-04	k: 456	n:730000
PVRL4   730000 perm   360 sec   (2029 perm/sec)   p_kst 6.246575e-04   p_cons 3.195397e-01   p_joint 9.890411e-04

Joint ci ratio: 1.450140e-01	ci left: 9.149429e-04	ci right 1.059280e-03	k: 729	n:740000
Cons ci ratio: 6.649404e-03	ci left: 3.185025e-01	ci right 3.206287e-01	k: 236478	n:740000
KS ci ratio: 1.821207e-01	ci left: 5.687008e-04	ci right 6.839153e-04	k: 462	n:740000
PVRL4   740000 perm   368 sec   (2012 perm/sec)   p_kst 6.243243e-04   p_cons 3.195649e-01   p_joint 9.851351e-04

Joint ci ratio: 1.440309e-01	ci left: 9.155949e-04	ci right 1.058971e-03	k: 739	n:750000
Cons ci ratio: 6.604736e-03	ci left: 3.185220e-01	ci right 3.206340e-01	k: 239683	n:750000
KS ci ratio: 1.811454e-01	ci left: 5.674817e-04	ci right 6.817659e-04	k: 467	n:750000
PVRL4   750000 perm   376 sec   (1995 perm/sec)   p_kst 6.226667e-04   p_cons 3.195773e-01   p_joint 9.853333e-04

Joint ci ratio: 1.425924e-01	ci left: 9.225770e-04	ci right 1.065481e-03	k: 754	n:760000
Cons ci ratio: 6.561553e-03	ci left: 3.185017e-01	ci right 3.205997e-01	k: 242858	n:760000
KS ci ratio: 1.794280e-01	ci left: 5.713226e-04	ci right 6.851711e-04	k: 476	n:760000
PVRL4   760000 perm   384 sec   (1978 perm/sec)   p_kst 6.263158e-04   p_cons 3.195500e-01   p_joint 9.921053e-04

Joint ci ratio: 1.413802e-01	ci left: 9.268789e-04	ci right 1.069126e-03	k: 767	n:770000
Cons ci ratio: 6.518836e-03	ci left: 3.185066e-01	ci right 3.205909e-01	k: 246052	n:770000
KS ci ratio: 1.775759e-01	ci left: 5.763097e-04	ci right 6.898393e-04	k: 486	n:770000
PVRL4   770000 perm   393 sec   (1961 perm/sec)   p_kst 6.311688e-04   p_cons 3.195481e-01   p_joint 9.961039e-04

Joint ci ratio: 9.937274e-02	ci left: 1.892063e-03	ci right 2.091152e-03	k: 1552	n:780000
Cons ci ratio: 6.476694e-03	ci left: 3.185280e-01	ci right 3.205990e-01	k: 249259	n:780000
KS ci ratio: 1.754270e-01	ci left: 5.836263e-04	ci right 6.970585e-04	k: 498	n:780000
PVRL4   780000 perm   401 sec   (1945 perm/sec)   p_kst 6.384615e-04   p_cons 3.195628e-01   p_joint 1.989744e-03

Joint ci ratio: 1.390456e-01	ci left: 9.351709e-04	ci right 1.076124e-03	k: 793	n:790000
Cons ci ratio: 6.434048e-03	ci left: 3.186375e-01	ci right 3.206955e-01	k: 252536	n:790000
KS ci ratio: 1.743818e-01	ci left: 5.835011e-04	ci right 6.961621e-04	k: 504	n:790000
PVRL4   790000 perm   410 sec   (1928 perm/sec)   p_kst 6.379747e-04   p_cons 3.196658e-01   p_joint 1.003797e-03

Joint ci ratio: 1.381782e-01	ci left: 9.355478e-04	ci right 1.075606e-03	k: 803	n:800000
Cons ci ratio: 6.392894e-03	ci left: 3.186993e-01	ci right 3.207445e-01	k: 255777	n:800000
KS ci ratio: 1.733551e-01	ci left: 5.833809e-04	ci right 6.952862e-04	k: 510	n:800000
PVRL4   800000 perm   418 sec   (1913 perm/sec)   p_kst 6.375000e-04   p_cons 3.197213e-01   p_joint 1.003750e-03

Joint ci ratio: 1.374113e-01	ci left: 9.347258e-04	ci right 1.073821e-03	k: 812	n:810000
Cons ci ratio: 6.353926e-03	ci left: 3.186634e-01	ci right 3.206959e-01	k: 258940	n:810000
KS ci ratio: 1.725133e-01	ci left: 5.820843e-04	ci right 6.931422e-04	k: 515	n:810000
PVRL4   810000 perm   427 sec   (1897 perm/sec)   p_kst 6.358025e-04   p_cons 3.196790e-01   p_joint 1.002469e-03

Joint ci ratio: 1.367404e-01	ci left: 9.327482e-04	ci right 1.070816e-03	k: 820	n:820000
Cons ci ratio: 6.314636e-03	ci left: 3.186992e-01	ci right 3.207192e-01	k: 262161	n:820000
KS ci ratio: 1.718488e-01	ci left: 5.796535e-04	ci right 6.897774e-04	k: 519	n:820000
PVRL4   820000 perm   436 sec   (1880 perm/sec)   p_kst 6.329268e-04   p_cons 3.197085e-01   p_joint 1.000000e-03

Joint ci ratio: 1.358333e-01	ci left: 9.343114e-04	ci right 1.071619e-03	k: 831	n:830000
Cons ci ratio: 6.275422e-03	ci left: 3.187786e-01	ci right 3.207865e-01	k: 265419	n:830000
KS ci ratio: 1.711918e-01	ci left: 5.772821e-04	ci right 6.864929e-04	k: 523	n:830000
PVRL4   830000 perm   445 sec   (1866 perm/sec)   p_kst 6.301205e-04   p_cons 3.197819e-01   p_joint 1.001205e-03

Joint ci ratio: 1.350243e-01	ci left: 9.346901e-04	ci right 1.071169e-03	k: 841	n:840000
Cons ci ratio: 6.238858e-03	ci left: 3.187218e-01	ci right 3.207176e-01	k: 268564	n:840000
KS ci ratio: 1.703810e-01	ci left: 5.761076e-04	ci right 6.845269e-04	k: 528	n:840000
PVRL4   840000 perm   454 sec   (1852 perm/sec)   p_kst 6.285714e-04   p_cons 3.197190e-01   p_joint 1.001190e-03

Joint ci ratio: 1.341508e-01	ci left: 9.361993e-04	ci right 1.071944e-03	k: 852	n:850000
Cons ci ratio: 6.201551e-03	ci left: 3.187627e-01	ci right 3.207468e-01	k: 271791	n:850000
KS ci ratio: 1.695816e-01	ci left: 5.749619e-04	ci right 6.826061e-04	k: 533	n:850000
PVRL4   850000 perm   463 sec   (1837 perm/sec)   p_kst 6.270588e-04   p_cons 3.197541e-01   p_joint 1.002353e-03

Joint ci ratio: 1.333713e-01	ci left: 9.365520e-04	ci right 1.071496e-03	k: 862	n:860000
Cons ci ratio: 6.165877e-03	ci left: 3.187341e-01	ci right 3.207066e-01	k: 274959	n:860000
KS ci ratio: 1.684808e-01	ci left: 5.760716e-04	ci right 6.831523e-04	k: 540	n:860000
PVRL4   860000 perm   472 sec   (1823 perm/sec)   p_kst 6.279070e-04   p_cons 3.197198e-01   p_joint 1.002326e-03

Joint ci ratio: 1.325293e-01	ci left: 9.380103e-04	ci right 1.072244e-03	k: 873	n:870000
Cons ci ratio: 6.129888e-03	ci left: 3.187717e-01	ci right 3.207329e-01	k: 278184	n:870000
KS ci ratio: 1.678617e-01	ci left: 5.738542e-04	ci right 6.800911e-04	k: 544	n:870000
PVRL4   870000 perm   481 sec   (1810 perm/sec)   p_kst 6.252874e-04   p_cons 3.197517e-01   p_joint 1.003448e-03

Joint ci ratio: 1.321522e-01	ci left: 9.328446e-04	ci right 1.065930e-03	k: 878	n:880000
Cons ci ratio: 6.095064e-03	ci left: 3.187699e-01	ci right 3.207199e-01	k: 281375	n:880000
KS ci ratio: 1.670970e-01	ci left: 5.727767e-04	ci right 6.782826e-04	k: 549	n:880000
PVRL4   880000 perm   490 sec   (1796 perm/sec)   p_kst 6.238636e-04   p_cons 3.197443e-01   p_joint 9.977273e-04

Joint ci ratio: 1.320027e-01	ci left: 9.245359e-04	ci right 1.056275e-03	k: 880	n:890000
Cons ci ratio: 6.061734e-03	ci left: 3.187031e-01	ci right 3.206419e-01	k: 284508	n:890000
KS ci ratio: 1.670976e-01	ci left: 5.663409e-04	ci right 6.706616e-04	k: 549	n:890000
PVRL4   890000 perm   499 sec   (1783 perm/sec)   p_kst 6.168539e-04   p_cons 3.196719e-01   p_joint 9.887640e-04

Joint ci ratio: 1.311126e-01	ci left: 9.271578e-04	ci right 1.058310e-03	k: 892	n:900000
Cons ci ratio: 6.027021e-03	ci left: 3.187765e-01	ci right 3.207047e-01	k: 287766	n:900000
KS ci ratio: 1.658953e-01	ci left: 5.685668e-04	ci right 6.724687e-04	k: 557	n:900000
PVRL4   900000 perm   508 sec   (1770 perm/sec)   p_kst 6.188889e-04   p_cons 3.197400e-01   p_joint 9.911111e-04

Joint ci ratio: 1.301684e-01	ci left: 9.307882e-04	ci right 1.061433e-03	k: 905	n:910000
Cons ci ratio: 5.993396e-03	ci left: 3.188121e-01	ci right 3.207297e-01	k: 290991	n:910000
KS ci ratio: 1.648643e-01	ci left: 5.696928e-04	ci right 6.730893e-04	k: 564	n:910000
PVRL4   910000 perm   518 sec   (1758 perm/sec)   p_kst 6.197802e-04   p_cons 3.197703e-01   p_joint 9.945055e-04

Joint ci ratio: 9.134375e-02	ci left: 1.906549e-03	ci right 2.090088e-03	k: 1837	n:920000
Cons ci ratio: 5.961400e-03	ci left: 3.187688e-01	ci right 3.206758e-01	k: 294144	n:920000
KS ci ratio: 1.635665e-01	ci left: 5.728811e-04	ci right 6.759573e-04	k: 573	n:920000
PVRL4   920000 perm   527 sec   (1744 perm/sec)   p_kst 6.228261e-04   p_cons 3.197217e-01   p_joint 1.996739e-03

Joint ci ratio: 9.085079e-02	ci left: 1.907064e-03	ci right 2.089609e-03	k: 1857	n:930000
Cons ci ratio: 5.929032e-03	ci left: 3.187909e-01	ci right 3.206877e-01	k: 297357	n:930000
KS ci ratio: 1.624383e-01	ci left: 5.749724e-04	ci right 6.776416e-04	k: 581	n:930000
PVRL4   930000 perm   537 sec   (1732 perm/sec)   p_kst 6.247312e-04   p_cons 3.197387e-01   p_joint 1.996774e-03

Joint ci ratio: 9.034164e-02	ci left: 1.908610e-03	ci right 2.090225e-03	k: 1878	n:940000
Cons ci ratio: 5.896911e-03	ci left: 3.188327e-01	ci right 3.207194e-01	k: 300589	n:940000
KS ci ratio: 1.613331e-01	ci left: 5.770216e-04	ci right 6.792878e-04	k: 589	n:940000
PVRL4   940000 perm   547 sec   (1718 perm/sec)   p_kst 6.265957e-04   p_cons 3.197755e-01   p_joint 1.997872e-03

Joint ci ratio: 1.276571e-01	ci left: 9.282699e-04	ci right 1.055857e-03	k: 941	n:950000
Cons ci ratio: 5.864682e-03	ci left: 3.189200e-01	ci right 3.207969e-01	k: 303865	n:950000
KS ci ratio: 1.607892e-01	ci left: 5.749884e-04	ci right 6.765175e-04	k: 593	n:950000
PVRL4   950000 perm   557 sec   (1706 perm/sec)   p_kst 6.242105e-04   p_cons 3.198579e-01   p_joint 9.905263e-04

Joint ci ratio: 1.270517e-01	ci left: 9.276767e-04	ci right 1.054532e-03	k: 950	n:960000
Cons ci ratio: 5.834722e-03	ci left: 3.188754e-01	ci right 3.207424e-01	k: 307016	n:960000
KS ci ratio: 1.599832e-01	ci left: 5.749981e-04	ci right 6.759711e-04	k: 599	n:960000
PVRL4   960000 perm   567 sec   (1694 perm/sec)   p_kst 6.239583e-04   p_cons 3.198083e-01   p_joint 9.895833e-04

Joint ci ratio: 1.262574e-01	ci left: 9.300923e-04	ci right 1.056423e-03	k: 962	n:970000
Cons ci ratio: 5.804226e-03	ci left: 3.189059e-01	ci right 3.207633e-01	k: 310239	n:970000
KS ci ratio: 1.589271e-01	ci left: 5.769887e-04	ci right 6.775785e-04	k: 607	n:970000
PVRL4   970000 perm   577 sec   (1682 perm/sec)   p_kst 6.257732e-04   p_cons 3.198340e-01   p_joint 9.917526e-04

Joint ci ratio: 1.254136e-01	ci left: 9.334494e-04	ci right 1.059326e-03	k: 975	n:980000
Cons ci ratio: 5.775150e-03	ci left: 3.188644e-01	ci right 3.207122e-01	k: 313392	n:980000
KS ci ratio: 1.576357e-01	ci left: 5.809011e-04	ci right 6.812722e-04	k: 617	n:980000
PVRL4   980000 perm   587 sec   (1670 perm/sec)   p_kst 6.295918e-04   p_cons 3.197878e-01   p_joint 9.948980e-04

Joint ci ratio: 1.276597e-01	ci left: 8.907629e-04	ci right 1.013197e-03	k: 941	n:990000
Cons ci ratio: 5.507184e-03	ci left: 3.375921e-01	ci right 3.394574e-01	k: 335139	n:990000
KS ci ratio: 1.562509e-01	ci left: 5.857082e-04	ci right 6.859377e-04	k: 628	n:990000
PVRL4   990000 perm   597 sec   (1659 perm/sec)   p_kst 6.343434e-04   p_cons 3.385242e-01   p_joint 9.505051e-04

Joint ci ratio: 1.271211e-01	ci left: 8.896003e-04	ci right 1.011320e-03	k: 949	n:1000000
Cons ci ratio: 5.480463e-03	ci left: 3.375245e-01	ci right 3.393804e-01	k: 338452	n:1000000
KS ci ratio: 1.556337e-01	ci left: 5.846560e-04	ci right 6.842733e-04	k: 633	n:1000000
PVRL4   1000000 perm   607 sec   (1647 perm/sec)   p_kst 6.330000e-04   p_cons 3.384520e-01   p_joint 9.490000e-04

Joint ci ratio: 1.261289e-01	ci left: 8.951736e-04	ci right 1.016629e-03	k: 964	n:1010000
Cons ci ratio: 5.453512e-03	ci left: 3.375088e-01	ci right 3.393554e-01	k: 341816	n:1010000
KS ci ratio: 1.546608e-01	ci left: 5.864807e-04	ci right 6.857263e-04	k: 641	n:1010000
PVRL4   1010000 perm   617 sec   (1636 perm/sec)   p_kst 6.346535e-04   p_cons 3.384317e-01   p_joint 9.544554e-04

Joint ci ratio: 1.258037e-01	ci left: 8.911448e-04	ci right 1.011718e-03	k: 969	n:1020000
Cons ci ratio: 5.426539e-03	ci left: 3.375278e-01	ci right 3.393653e-01	k: 345215	n:1020000
KS ci ratio: 1.543010e-01	ci left: 5.835583e-04	ci right 6.820584e-04	k: 644	n:1020000
PVRL4   1020000 perm   628 sec   (1624 perm/sec)   p_kst 6.313725e-04   p_cons 3.384461e-01   p_joint 9.500000e-04

Joint ci ratio: 1.252241e-01	ci left: 8.909564e-04	ci right 1.010908e-03	k: 978	n:1030000
Cons ci ratio: 5.399728e-03	ci left: 3.375657e-01	ci right 3.393944e-01	k: 348634	n:1030000
KS ci ratio: 1.535883e-01	ci left: 5.834935e-04	ci right 6.814859e-04	k: 650	n:1030000
PVRL4   1030000 perm   638 sec   (1613 perm/sec)   p_kst 6.310680e-04   p_cons 3.384796e-01   p_joint 9.495146e-04

Joint ci ratio: 1.244635e-01	ci left: 8.935677e-04	ci right 1.013086e-03	k: 990	n:1040000
Cons ci ratio: 5.373622e-03	ci left: 3.375771e-01	ci right 3.393969e-01	k: 352026	n:1040000
KS ci ratio: 1.526531e-01	ci left: 5.852806e-04	ci right 6.829199e-04	k: 658	n:1040000
PVRL4   1040000 perm   649 sec   (1603 perm/sec)   p_kst 6.326923e-04   p_cons 3.384865e-01   p_joint 9.519231e-04

Joint ci ratio: 1.239642e-01	ci left: 8.924398e-04	ci right 1.011293e-03	k: 998	n:1050000
Cons ci ratio: 5.348175e-03	ci left: 3.375644e-01	ci right 3.393755e-01	k: 355393	n:1050000
KS ci ratio: 1.520773e-01	ci left: 5.842869e-04	ci right 6.813593e-04	k: 663	n:1050000
PVRL4   1050000 perm   660 sec   (1592 perm/sec)   p_kst 6.314286e-04   p_cons 3.384695e-01   p_joint 9.504762e-04

Joint ci ratio: 1.231653e-01	ci left: 8.959057e-04	ci right 1.014396e-03	k: 1011	n:1060000
Cons ci ratio: 5.323109e-03	ci left: 3.375501e-01	ci right 3.393526e-01	k: 358758	n:1060000
KS ci ratio: 1.510568e-01	ci left: 5.869433e-04	ci right 6.837436e-04	k: 672	n:1060000
PVRL4   1060000 perm   670 sec   (1581 perm/sec)   p_kst 6.339623e-04   p_cons 3.384509e-01   p_joint 9.537736e-04

Joint ci ratio: 1.223815e-01	ci left: 8.993093e-04	ci right 1.017438e-03	k: 1024	n:1070000
Cons ci ratio: 5.298216e-03	ci left: 3.375511e-01	ci right 3.393451e-01	k: 362139	n:1070000
KS ci ratio: 1.497275e-01	ci left: 5.922510e-04	ci right 6.889900e-04	k: 684	n:1070000
PVRL4   1070000 perm   681 sec   (1571 perm/sec)   p_kst 6.392523e-04   p_cons 3.384477e-01   p_joint 9.570093e-04

Joint ci ratio: 1.219659e-01	ci left: 8.972657e-04	ci right 1.014696e-03	k: 1031	n:1080000
Cons ci ratio: 5.273635e-03	ci left: 3.375548e-01	ci right 3.393405e-01	k: 365523	n:1080000
KS ci ratio: 1.494009e-01	ci left: 5.894409e-04	ci right 6.854922e-04	k: 687	n:1080000
PVRL4   1080000 perm   692 sec   (1561 perm/sec)   p_kst 6.361111e-04   p_cons 3.384472e-01   p_joint 9.546296e-04

Joint ci ratio: 1.214376e-01	ci left: 8.970394e-04	ci right 1.013895e-03	k: 1040	n:1090000
Cons ci ratio: 5.249652e-03	ci left: 3.375365e-01	ci right 3.393139e-01	k: 368883	n:1090000
KS ci ratio: 1.486466e-01	ci left: 5.902158e-04	ci right 6.858646e-04	k: 694	n:1090000
PVRL4   1090000 perm   703 sec   (1551 perm/sec)   p_kst 6.366972e-04   p_cons 3.384248e-01   p_joint 9.541284e-04

Joint ci ratio: 1.181333e-01	ci left: 9.409153e-04	ci right 1.059919e-03	k: 1099	n:1100000
Cons ci ratio: 5.225568e-03	ci left: 3.375548e-01	ci right 3.393242e-01	k: 372283	n:1100000
KS ci ratio: 1.480091e-01	ci left: 5.901023e-04	ci right 6.852863e-04	k: 700	n:1100000
PVRL4   1100000 perm   714 sec   (1541 perm/sec)   p_kst 6.363636e-04   p_cons 3.384391e-01   p_joint 9.990909e-04

Joint ci ratio: 1.175999e-01	ci left: 9.411820e-04	ci right 1.059645e-03	k: 1109	n:1110000
Cons ci ratio: 5.201698e-03	ci left: 3.375828e-01	ci right 3.393442e-01	k: 375694	n:1110000
KS ci ratio: 1.475888e-01	ci left: 5.882563e-04	ci right 6.828494e-04	k: 704	n:1110000
PVRL4   1110000 perm   725 sec   (1531 perm/sec)   p_kst 6.342342e-04   p_cons 3.384631e-01   p_joint 9.990991e-04

Joint ci ratio: 1.170738e-01	ci left: 9.414451e-04	ci right 1.059374e-03	k: 1119	n:1120000
Cons ci ratio: 5.178307e-03	ci left: 3.375968e-01	ci right 3.393504e-01	k: 379090	n:1120000
KS ci ratio: 1.468614e-01	ci left: 5.890238e-04	ci right 6.832325e-04	k: 711	n:1120000
PVRL4   1120000 perm   736 sec   (1521 perm/sec)   p_kst 6.348214e-04   p_cons 3.384732e-01   p_joint 9.991071e-04

Joint ci ratio: 1.167098e-01	ci left: 9.391272e-04	ci right 1.056375e-03	k: 1126	n:1130000
Cons ci ratio: 5.155799e-03	ci left: 3.375612e-01	ci right 3.393069e-01	k: 382430	n:1130000
KS ci ratio: 1.463486e-01	ci left: 5.880737e-04	ci right 6.817732e-04	k: 716	n:1130000
PVRL4   1130000 perm   748 sec   (1512 perm/sec)   p_kst 6.336283e-04   p_cons 3.384336e-01   p_joint 9.964602e-04

Joint ci ratio: 1.165035e-01	ci left: 9.342956e-04	ci right 1.050720e-03	k: 1130	n:1140000
Cons ci ratio: 5.132878e-03	ci left: 3.375875e-01	ci right 3.393256e-01	k: 385840	n:1140000
KS ci ratio: 1.459422e-01	ci left: 5.862956e-04	ci right 6.794298e-04	k: 720	n:1140000
PVRL4   1140000 perm   759 sec   (1502 perm/sec)   p_kst 6.315789e-04   p_cons 3.384561e-01   p_joint 9.912281e-04

Joint ci ratio: 1.159410e-01	ci left: 9.354585e-04	ci right 1.051426e-03	k: 1141	n:1150000
Cons ci ratio: 5.109625e-03	ci left: 3.376690e-01	ci right 3.393996e-01	k: 389314	n:1150000
KS ci ratio: 1.449403e-01	ci left: 5.895767e-04	ci right 6.825335e-04	k: 730	n:1150000
PVRL4   1150000 perm   771 sec   (1492 perm/sec)   p_kst 6.347826e-04   p_cons 3.385339e-01   p_joint 9.921739e-04

Joint ci ratio: 1.154869e-01	ci left: 9.349282e-04	ci right 1.050345e-03	k: 1150	n:1160000
Cons ci ratio: 5.088183e-03	ci left: 3.376173e-01	ci right 3.393404e-01	k: 392635	n:1160000
KS ci ratio: 1.443491e-01	ci left: 5.894793e-04	ci right 6.820091e-04	k: 736	n:1160000
PVRL4   1160000 perm   782 sec   (1483 perm/sec)   p_kst 6.344828e-04   p_cons 3.384784e-01   p_joint 9.913793e-04

Joint ci ratio: 1.149884e-01	ci left: 9.352380e-04	ci right 1.050161e-03	k: 1160	n:1170000
Cons ci ratio: 5.066042e-03	ci left: 3.376519e-01	ci right 3.393677e-01	k: 396056	n:1170000
KS ci ratio: 1.436684e-01	ci left: 5.902084e-04	ci right 6.823782e-04	k: 743	n:1170000
PVRL4   1170000 perm   794 sec   (1474 perm/sec)   p_kst 6.350427e-04   p_cons 3.385094e-01   p_joint 9.914530e-04

Joint ci ratio: 1.144964e-01	ci left: 9.355436e-04	ci right 1.049979e-03	k: 1170	n:1180000
Cons ci ratio: 5.044617e-03	ci left: 3.376479e-01	ci right 3.393563e-01	k: 399432	n:1180000
KS ci ratio: 1.429972e-01	ci left: 5.909261e-04	ci right 6.827402e-04	k: 750	n:1180000
PVRL4   1180000 perm   806 sec   (1465 perm/sec)   p_kst 6.355932e-04   p_cons 3.385017e-01   p_joint 9.915254e-04

Joint ci ratio: 1.138659e-01	ci left: 9.382944e-04	ci right 1.052392e-03	k: 1183	n:1190000
Cons ci ratio: 5.023254e-03	ci left: 3.376624e-01	ci right 3.393636e-01	k: 402830	n:1190000
KS ci ratio: 1.421479e-01	ci left: 5.932536e-04	ci right 6.848354e-04	k: 759	n:1190000
PVRL4   1190000 perm   818 sec   (1455 perm/sec)   p_kst 6.378151e-04   p_cons 3.385126e-01   p_joint 9.941176e-04

Joint ci ratio: 1.133881e-01	ci left: 9.385718e-04	ci right 1.052192e-03	k: 1193	n:1200000
Cons ci ratio: 5.002263e-03	ci left: 3.376675e-01	ci right 3.393616e-01	k: 406217	n:1200000
KS ci ratio: 1.415901e-01	ci left: 5.931324e-04	ci right 6.843058e-04	k: 765	n:1200000
PVRL4   1200000 perm   830 sec   (1446 perm/sec)   p_kst 6.375000e-04   p_cons 3.385142e-01   p_joint 9.941667e-04

Joint ci ratio: 1.130573e-01	ci left: 9.364362e-04	ci right 1.049445e-03	k: 1200	n:1210000
Cons ci ratio: 4.981734e-03	ci left: 3.376544e-01	ci right 3.393415e-01	k: 409582	n:1210000
KS ci ratio: 1.411303e-01	ci left: 5.922165e-04	ci right 6.829287e-04	k: 770	n:1210000
PVRL4   1210000 perm   842 sec   (1437 perm/sec)   p_kst 6.363636e-04   p_cons 3.384975e-01   p_joint 9.917355e-04

Joint ci ratio: 1.128230e-01	ci left: 9.327430e-04	ci right 1.045058e-03	k: 1205	n:1220000
Cons ci ratio: 4.961720e-03	ci left: 3.376177e-01	ci right 3.392978e-01	k: 412918	n:1220000
KS ci ratio: 1.406750e-01	ci left: 5.913162e-04	ci right 6.815737e-04	k: 775	n:1220000
PVRL4   1220000 perm   854 sec   (1429 perm/sec)   p_kst 6.352459e-04   p_cons 3.384574e-01   p_joint 9.877049e-04

Joint ci ratio: 1.123119e-01	ci left: 9.338510e-04	ci right 1.045756e-03	k: 1216	n:1230000
Cons ci ratio: 4.941775e-03	ci left: 3.375971e-01	ci right 3.392703e-01	k: 416273	n:1230000
KS ci ratio: 1.403139e-01	ci left: 5.896464e-04	ci right 6.793988e-04	k: 779	n:1230000
PVRL4   1230000 perm   866 sec   (1420 perm/sec)   p_kst 6.333333e-04   p_cons 3.384333e-01   p_joint 9.886179e-04

Joint ci ratio: 1.118077e-01	ci left: 9.349423e-04	ci right 1.046442e-03	k: 1227	n:1240000
Cons ci ratio: 4.921466e-03	ci left: 3.376316e-01	ci right 3.392982e-01	k: 419696	n:1240000
KS ci ratio: 1.395112e-01	ci left: 5.918952e-04	ci right 6.814316e-04	k: 788	n:1240000
PVRL4   1240000 perm   880 sec   (1410 perm/sec)   p_kst 6.354839e-04   p_cons 3.384645e-01   p_joint 9.895161e-04

Joint ci ratio: 1.113552e-01	ci left: 9.352395e-04	ci right 1.046294e-03	k: 1237	n:1250000
Cons ci ratio: 4.901895e-03	ci left: 3.376209e-01	ci right 3.392807e-01	k: 423063	n:1250000
KS ci ratio: 1.388092e-01	ci left: 5.933373e-04	ci right 6.826028e-04	k: 796	n:1250000
PVRL4   1250000 perm   892 sec   (1401 perm/sec)   p_kst 6.368000e-04   p_cons 3.384504e-01   p_joint 9.896000e-04

Joint ci ratio: 1.113106e-01	ci left: 9.285884e-04	ci right 1.038806e-03	k: 1238	n:1260000
Cons ci ratio: 4.882824e-03	ci left: 3.375857e-01	ci right 3.392389e-01	k: 426399	n:1260000
KS ci ratio: 1.388095e-01	ci left: 5.886282e-04	ci right 6.771855e-04	k: 796	n:1260000
PVRL4   1260000 perm   904 sec   (1393 perm/sec)   p_kst 6.317460e-04   p_cons 3.384119e-01   p_joint 9.825397e-04

Joint ci ratio: 1.107754e-01	ci left: 9.304631e-04	ci right 1.040337e-03	k: 1250	n:1270000
Cons ci ratio: 4.863375e-03	ci left: 3.376062e-01	ci right 3.392528e-01	k: 429805	n:1270000
KS ci ratio: 1.380322e-01	ci left: 5.908345e-04	ci right 6.791851e-04	k: 805	n:1270000
PVRL4   1270000 perm   917 sec   (1385 perm/sec)   p_kst 6.338583e-04   p_cons 3.384291e-01   p_joint 9.842520e-04

Joint ci ratio: 1.099866e-01	ci left: 9.368683e-04	ci right 1.046660e-03	k: 1268	n:1280000
Cons ci ratio: 4.844284e-03	ci left: 3.376146e-01	ci right 3.392549e-01	k: 433196	n:1280000
KS ci ratio: 1.367650e-01	ci left: 5.975347e-04	ci right 6.860001e-04	k: 820	n:1280000
PVRL4   1280000 perm   930 sec   (1377 perm/sec)   p_kst 6.406250e-04   p_cons 3.384344e-01   p_joint 9.906250e-04

Joint ci ratio: 1.093847e-01	ci left: 9.401608e-04	ci right 1.049696e-03	k: 1282	n:1290000
Cons ci ratio: 4.825532e-03	ci left: 3.376121e-01	ci right 3.392460e-01	k: 436573	n:1290000
KS ci ratio: 1.358577e-01	ci left: 6.011391e-04	ci right 6.895000e-04	k: 831	n:1290000
PVRL4   1290000 perm   943 sec   (1368 perm/sec)   p_kst 6.441860e-04   p_cons 3.384287e-01   p_joint 9.937984e-04

Joint ci ratio: 1.088346e-01	ci left: 9.426559e-04	ci right 1.051895e-03	k: 1295	n:1300000
Cons ci ratio: 4.806856e-03	ci left: 3.376227e-01	ci right 3.392503e-01	k: 439967	n:1300000
KS ci ratio: 1.352897e-01	ci left: 6.017169e-04	ci right 6.897632e-04	k: 838	n:1300000
PVRL4   1300000 perm   956 sec   (1360 perm/sec)   p_kst 6.446154e-04   p_cons 3.384362e-01   p_joint 9.961538e-04

Joint ci ratio: 1.085003e-01	ci left: 9.414010e-04	ci right 1.050138e-03	k: 1303	n:1310000
Cons ci ratio: 4.788731e-03	ci left: 3.376019e-01	ci right 3.392232e-01	k: 443320	n:1310000
KS ci ratio: 1.348085e-01	ci left: 6.015491e-04	ci right 6.892327e-04	k: 844	n:1310000
PVRL4   1310000 perm   969 sec   (1352 perm/sec)   p_kst 6.442748e-04   p_cons 3.384122e-01   p_joint 9.946565e-04

Joint ci ratio: 1.081691e-01	ci left: 9.401655e-04	ci right 1.048407e-03	k: 1311	n:1320000
Cons ci ratio: 4.770905e-03	ci left: 3.375723e-01	ci right 3.391875e-01	k: 446661	n:1320000
KS ci ratio: 1.342536e-01	ci left: 6.021164e-04	ci right 6.894926e-04	k: 851	n:1320000
PVRL4   1320000 perm   982 sec   (1344 perm/sec)   p_kst 6.446970e-04   p_cons 3.383795e-01   p_joint 9.931818e-04

Joint ci ratio: 1.080048e-01	ci left: 9.360227e-04	ci right 1.043613e-03	k: 1315	n:1330000
Cons ci ratio: 4.752758e-03	ci left: 3.375921e-01	ci right 3.392011e-01	k: 450067	n:1330000
KS ci ratio: 1.340180e-01	ci left: 5.997692e-04	ci right 6.866398e-04	k: 854	n:1330000
PVRL4   1330000 perm   995 sec   (1337 perm/sec)   p_kst 6.421053e-04   p_cons 3.383962e-01   p_joint 9.887218e-04

Joint ci ratio: 1.076781e-01	ci left: 9.348465e-04	ci right 1.041956e-03	k: 1323	n:1340000
Cons ci ratio: 4.735125e-03	ci left: 3.375824e-01	ci right 3.391854e-01	k: 453434	n:1340000
KS ci ratio: 1.334727e-01	ci left: 6.003424e-04	ci right 6.869142e-04	k: 861	n:1340000
PVRL4   1340000 perm   1008 sec   (1329 perm/sec)   p_kst 6.425373e-04   p_cons 3.383836e-01   p_joint 9.873134e-04

Joint ci ratio: 1.072737e-01	ci left: 9.351300e-04	ci right 1.041844e-03	k: 1333	n:1350000
Cons ci ratio: 4.717632e-03	ci left: 3.375781e-01	ci right 3.391752e-01	k: 456808	n:1350000
KS ci ratio: 1.329340e-01	ci left: 6.009078e-04	ci right 6.871838e-04	k: 868	n:1350000
PVRL4   1350000 perm   1022 sec   (1321 perm/sec)   p_kst 6.429630e-04   p_cons 3.383763e-01   p_joint 9.874074e-04

Joint ci ratio: 1.067150e-01	ci left: 9.382728e-04	ci right 1.044753e-03	k: 1347	n:1360000
Cons ci ratio: 4.700315e-03	ci left: 3.375754e-01	ci right 3.391665e-01	k: 460184	n:1360000
KS ci ratio: 1.321004e-01	ci left: 6.043095e-04	ci right 6.904871e-04	k: 879	n:1360000
PVRL4   1360000 perm   1036 sec   (1313 perm/sec)   p_kst 6.463235e-04   p_cons 3.383706e-01   p_joint 9.904412e-04

Joint ci ratio: 1.060482e-01	ci left: 9.435028e-04	ci right 1.049866e-03	k: 1364	n:1370000
Cons ci ratio: 4.683288e-03	ci left: 3.375632e-01	ci right 3.391485e-01	k: 463547	n:1370000
KS ci ratio: 1.313560e-01	ci left: 6.069573e-04	ci right 6.929867e-04	k: 889	n:1370000
PVRL4   1370000 perm   1049 sec   (1305 perm/sec)   p_kst 6.489051e-04   p_cons 3.383555e-01   p_joint 9.956204e-04

Joint ci ratio: 1.057774e-01	ci left: 9.416039e-04	ci right 1.047465e-03	k: 1371	n:1380000
Cons ci ratio: 4.667161e-03	ci left: 3.374823e-01	ci right 3.390618e-01	k: 466815	n:1380000
KS ci ratio: 1.310619e-01	ci left: 6.053624e-04	ci right 6.909587e-04	k: 893	n:1380000
PVRL4   1380000 perm   1063 sec   (1298 perm/sec)   p_kst 6.471014e-04   p_cons 3.382717e-01   p_joint 9.934783e-04

Joint ci ratio: 1.052417e-01	ci left: 9.446360e-04	ci right 1.050267e-03	k: 1385	n:1390000
Cons ci ratio: 4.650423e-03	ci left: 3.374775e-01	ci right 3.390512e-01	k: 470187	n:1390000
KS ci ratio: 1.303348e-01	ci left: 6.079664e-04	ci right 6.934170e-04	k: 903	n:1390000
PVRL4   1390000 perm   1077 sec   (1291 perm/sec)   p_kst 6.496403e-04   p_cons 3.382640e-01   p_joint 9.964029e-04

Joint ci ratio: 1.048640e-01	ci left: 9.448438e-04	ci right 1.050095e-03	k: 1395	n:1400000
Cons ci ratio: 4.634026e-03	ci left: 3.374570e-01	ci right 3.390251e-01	k: 473537	n:1400000
KS ci ratio: 1.297618e-01	ci left: 6.091522e-04	ci right 6.943641e-04	k: 911	n:1400000
PVRL4   1400000 perm   1090 sec   (1284 perm/sec)   p_kst 6.507143e-04   p_cons 3.382407e-01   p_joint 9.964286e-04

Joint ci ratio: 1.044161e-01	ci left: 9.464307e-04	ci right 1.051381e-03	k: 1407	n:1410000
Cons ci ratio: 4.618394e-03	ci left: 3.373794e-01	ci right 3.389418e-01	k: 476806	n:1410000
KS ci ratio: 1.291964e-01	ci left: 6.103220e-04	ci right 6.952970e-04	k: 919	n:1410000
PVRL4   1410000 perm   1104 sec   (1277 perm/sec)   p_kst 6.517730e-04   p_cons 3.381603e-01   p_joint 9.978723e-04

Joint ci ratio: 1.039373e-01	ci left: 9.486822e-04	ci right 1.053370e-03	k: 1420	n:1420000
Cons ci ratio: 4.602216e-03	ci left: 3.373712e-01	ci right 3.389281e-01	k: 480172	n:1420000
KS ci ratio: 1.285689e-01	ci left: 6.121576e-04	ci right 6.969427e-04	k: 928	n:1420000
PVRL4   1420000 perm   1118 sec   (1270 perm/sec)   p_kst 6.535211e-04   p_cons 3.381493e-01   p_joint 1.000000e-03

Joint ci ratio: 1.034650e-01	ci left: 9.509032e-04	ci right 1.055331e-03	k: 1433	n:1430000
Cons ci ratio: 4.585870e-03	ci left: 3.373959e-01	ci right 3.389474e-01	k: 483585	n:1430000
KS ci ratio: 1.278823e-01	ci left: 6.146456e-04	ci right 6.992861e-04	k: 938	n:1430000
PVRL4   1430000 perm   1132 sec   (1263 perm/sec)   p_kst 6.559441e-04   p_cons 3.381713e-01   p_joint 1.002098e-03

Joint ci ratio: 1.029635e-01	ci left: 9.537710e-04	ci right 1.057975e-03	k: 1447	n:1440000
Cons ci ratio: 4.570066e-03	ci left: 3.373842e-01	ci right 3.389303e-01	k: 486946	n:1440000
KS ci ratio: 1.272066e-01	ci left: 6.171001e-04	ci right 7.015958e-04	k: 948	n:1440000
PVRL4   1440000 perm   1146 sec   (1256 perm/sec)   p_kst 6.583333e-04   p_cons 3.381569e-01   p_joint 1.004861e-03

Joint ci ratio: 1.027156e-01	ci left: 9.518967e-04	ci right 1.055630e-03	k: 1454	n:1450000
Cons ci ratio: 4.554284e-03	ci left: 3.373865e-01	ci right 3.389272e-01	k: 490327	n:1450000
KS ci ratio: 1.268729e-01	ci left: 6.161829e-04	ci right 7.003151e-04	k: 953	n:1450000
PVRL4   1450000 perm   1160 sec   (1250 perm/sec)   p_kst 6.572414e-04   p_cons 3.381566e-01   p_joint 1.002759e-03

Joint ci ratio: 1.020511e-01	ci left: 9.580575e-04	ci right 1.061747e-03	k: 1473	n:1460000
Cons ci ratio: 4.538748e-03	ci left: 3.373806e-01	ci right 3.389160e-01	k: 493696	n:1460000
KS ci ratio: 1.261475e-01	ci left: 6.192584e-04	ci right 7.032909e-04	k: 964	n:1460000
PVRL4   1460000 perm   1174 sec   (1243 perm/sec)   p_kst 6.602740e-04   p_cons 3.381479e-01   p_joint 1.008904e-03

Joint ci ratio: 1.018442e-01	ci left: 9.555176e-04	ci right 1.058710e-03	k: 1479	n:1470000
Cons ci ratio: 4.523232e-03	ci left: 3.373883e-01	ci right 3.389185e-01	k: 497085	n:1470000
KS ci ratio: 1.259520e-01	ci left: 6.170221e-04	ci right 7.006118e-04	k: 967	n:1470000
PVRL4   1470000 perm   1189 sec   (1237 perm/sec)   p_kst 6.578231e-04   p_cons 3.381531e-01   p_joint 1.006122e-03

Joint ci ratio: 1.014678e-01	ci left: 9.563049e-04	ci right 1.059177e-03	k: 1490	n:1480000
Cons ci ratio: 4.507160e-03	ci left: 3.374668e-01	ci right 3.389919e-01	k: 500579	n:1480000
KS ci ratio: 1.254347e-01	ci left: 6.180885e-04	ci right 7.014531e-04	k: 975	n:1480000
PVRL4   1480000 perm   1203 sec   (1230 perm/sec)   p_kst 6.587838e-04   p_cons 3.382291e-01   p_joint 1.006757e-03

Joint ci ratio: 1.012305e-01	ci left: 9.544656e-04	ci right 1.056886e-03	k: 1497	n:1490000
Cons ci ratio: 4.492092e-03	ci left: 3.374611e-01	ci right 3.389811e-01	k: 503949	n:1490000
KS ci ratio: 1.251147e-01	ci left: 6.171908e-04	ci right 7.002062e-04	k: 980	n:1490000
PVRL4   1490000 perm   1218 sec   (1224 perm/sec)   p_kst 6.577181e-04   p_cons 3.382208e-01   p_joint 1.004698e-03

Joint ci ratio: 1.009614e-01	ci left: 9.533009e-04	ci right 1.055308e-03	k: 1505	n:1500000
Cons ci ratio: 4.477242e-03	ci left: 3.374489e-01	ci right 3.389637e-01	k: 507309	n:1500000
KS ci ratio: 1.247339e-01	ci left: 6.169512e-04	ci right 6.996631e-04	k: 986	n:1500000
PVRL4   1500000 perm   1232 sec   (1218 perm/sec)   p_kst 6.573333e-04   p_cons 3.382060e-01   p_joint 1.003333e-03

Joint ci ratio: 1.006611e-01	ci left: 9.527976e-04	ci right 1.054430e-03	k: 1514	n:1510000
Cons ci ratio: 4.462755e-03	ci left: 3.374149e-01	ci right 3.389247e-01	k: 510636	n:1510000
KS ci ratio: 1.245449e-01	ci left: 6.147902e-04	ci right 6.970783e-04	k: 989	n:1510000
PVRL4   1510000 perm   1247 sec   (1211 perm/sec)   p_kst 6.549669e-04   p_cons 3.381695e-01   p_joint 1.002649e-03

Joint ci ratio: 1.002319e-01	ci left: 9.548671e-04	ci right 1.056260e-03	k: 1527	n:1520000
Cons ci ratio: 4.448291e-03	ci left: 3.373933e-01	ci right 3.388981e-01	k: 513981	n:1520000
KS ci ratio: 1.241692e-01	ci left: 6.145701e-04	ci right 6.965624e-04	k: 995	n:1520000
PVRL4   1520000 perm   1262 sec   (1205 perm/sec)   p_kst 6.546053e-04   p_cons 3.381454e-01   p_joint 1.004605e-03

Joint ci ratio: 9.984053e-02	ci left: 9.562731e-04	ci right 1.057396e-03	k: 1539	n:1530000
Cons ci ratio: 4.433707e-03	ci left: 3.373981e-01	ci right 3.388980e-01	k: 517366	n:1530000
KS ci ratio: 1.238588e-01	ci left: 6.137199e-04	ci right 6.953790e-04	k: 1000	n:1530000
PVRL4   1530000 perm   1277 sec   (1198 perm/sec)   p_kst 6.535948e-04   p_cons 3.381477e-01   p_joint 1.005882e-03

Joint ci ratio: 9.958228e-02	ci left: 9.551287e-04	ci right 1.055854e-03	k: 1547	n:1540000
Cons ci ratio: 4.419138e-03	ci left: 3.374158e-01	ci right 3.389108e-01	k: 520771	n:1540000
KS ci ratio: 1.234892e-01	ci left: 6.135103e-04	ci right 6.948802e-04	k: 1006	n:1540000
PVRL4   1540000 perm   1292 sec   (1192 perm/sec)   p_kst 6.532468e-04   p_cons 3.381630e-01   p_joint 1.004545e-03

Joint ci ratio: 9.926218e-02	ci left: 9.552578e-04	ci right 1.055654e-03	k: 1557	n:1550000
Cons ci ratio: 4.404635e-03	ci left: 3.374410e-01	ci right 3.389312e-01	k: 524188	n:1550000
KS ci ratio: 1.231839e-01	ci left: 6.126784e-04	ci right 6.937224e-04	k: 1011	n:1550000
PVRL4   1550000 perm   1307 sec   (1186 perm/sec)   p_kst 6.522581e-04   p_cons 3.381858e-01   p_joint 1.004516e-03

Joint ci ratio: 9.907173e-02	ci left: 9.528851e-04	ci right 1.052829e-03	k: 1563	n:1560000
Cons ci ratio: 4.390626e-03	ci left: 3.374300e-01	ci right 3.389154e-01	k: 527549	n:1560000
KS ci ratio: 1.229412e-01	ci left: 6.112361e-04	ci right 6.919184e-04	k: 1015	n:1560000
PVRL4   1560000 perm   1322 sec   (1180 perm/sec)   p_kst 6.506410e-04   p_cons 3.381724e-01   p_joint 1.001923e-03

Joint ci ratio: 9.872513e-02	ci left: 9.536488e-04	ci right 1.053302e-03	k: 1574	n:1570000
Cons ci ratio: 4.376688e-03	ci left: 3.374256e-01	ci right 3.389062e-01	k: 530920	n:1570000
KS ci ratio: 1.223405e-01	ci left: 6.135170e-04	ci right 6.940760e-04	k: 1025	n:1570000
PVRL4   1570000 perm   1337 sec   (1174 perm/sec)   p_kst 6.528662e-04   p_cons 3.381656e-01   p_joint 1.002548e-03

Joint ci ratio: 9.850656e-02	ci left: 9.519341e-04	ci right 1.051175e-03	k: 1581	n:1580000
Cons ci ratio: 4.362443e-03	ci left: 3.374661e-01	ci right 3.389421e-01	k: 534362	n:1580000
KS ci ratio: 1.222216e-01	ci left: 6.108610e-04	ci right 6.909877e-04	k: 1027	n:1580000
PVRL4   1580000 perm   1352 sec   (1168 perm/sec)   p_kst 6.500000e-04   p_cons 3.382038e-01   p_joint 1.000633e-03

Joint ci ratio: 9.804270e-02	ci left: 9.551493e-04	ci right 1.054230e-03	k: 1596	n:1590000
Cons ci ratio: 4.348129e-03	ci left: 3.375275e-01	ci right 3.389989e-01	k: 537838	n:1590000
KS ci ratio: 1.217488e-01	ci left: 6.118971e-04	ci right 6.918267e-04	k: 1035	n:1590000
PVRL4   1590000 perm   1368 sec   (1163 perm/sec)   p_kst 6.509434e-04   p_cons 3.382629e-01   p_joint 1.003774e-03

Joint ci ratio: 9.746436e-02	ci left: 9.607644e-04	ci right 1.059806e-03	k: 1615	n:1600000
Cons ci ratio: 4.334143e-03	ci left: 3.375687e-01	ci right 3.390356e-01	k: 541283	n:1600000
KS ci ratio: 1.209918e-01	ci left: 6.159511e-04	ci right 6.958743e-04	k: 1048	n:1600000
PVRL4   1600000 perm   1383 sec   (1157 perm/sec)   p_kst 6.550000e-04   p_cons 3.383019e-01   p_joint 1.009375e-03

Joint ci ratio: 9.728405e-02	ci left: 9.584329e-04	ci right 1.057041e-03	k: 1621	n:1610000
Cons ci ratio: 4.320716e-03	ci left: 3.375654e-01	ci right 3.390277e-01	k: 544657	n:1610000
KS ci ratio: 1.208192e-01	ci left: 6.139323e-04	ci right 6.934718e-04	k: 1051	n:1610000
PVRL4   1610000 perm   1399 sec   (1151 perm/sec)   p_kst 6.527950e-04   p_cons 3.382963e-01   p_joint 1.006832e-03

Joint ci ratio: 9.701530e-02	ci left: 9.579372e-04	ci right 1.056206e-03	k: 1630	n:1620000
Cons ci ratio: 4.307306e-03	ci left: 3.375733e-01	ci right 3.390310e-01	k: 548049	n:1620000
KS ci ratio: 1.207047e-01	ci left: 6.113398e-04	ci right 6.904630e-04	k: 1053	n:1620000
PVRL4   1620000 perm   1414 sec   (1146 perm/sec)   p_kst 6.500000e-04   p_cons 3.383019e-01   p_joint 1.006173e-03

Joint ci ratio: 9.671925e-02	ci left: 9.580466e-04	ci right 1.056010e-03	k: 1640	n:1630000
Cons ci ratio: 4.294020e-03	ci left: 3.375810e-01	ci right 3.390343e-01	k: 551441	n:1630000
KS ci ratio: 1.203627e-01	ci left: 6.111592e-04	ci right 6.900190e-04	k: 1059	n:1630000
PVRL4   1630000 perm   1430 sec   (1140 perm/sec)   p_kst 6.496933e-04   p_cons 3.383074e-01   p_joint 1.006135e-03

Joint ci ratio: 9.651371e-02	ci left: 9.563700e-04	ci right 1.053943e-03	k: 1647	n:1640000
Cons ci ratio: 4.281376e-03	ci left: 3.375344e-01	ci right 3.389832e-01	k: 554744	n:1640000
KS ci ratio: 1.200798e-01	ci left: 6.103897e-04	ci right 6.889520e-04	k: 1064	n:1640000
PVRL4   1640000 perm   1446 sec   (1135 perm/sec)   p_kst 6.487805e-04   p_cons 3.382585e-01   p_joint 1.004268e-03

Joint ci ratio: 9.619318e-02	ci left: 9.570798e-04	ci right 1.054382e-03	k: 1658	n:1650000
Cons ci ratio: 4.268068e-03	ci left: 3.375696e-01	ci right 3.390140e-01	k: 558181	n:1650000
KS ci ratio: 1.196313e-01	ci left: 6.113936e-04	ci right 6.897703e-04	k: 1072	n:1650000
PVRL4   1650000 perm   1461 sec   (1129 perm/sec)   p_kst 6.496970e-04   p_cons 3.382915e-01   p_joint 1.004848e-03

Joint ci ratio: 9.576110e-02	ci left: 9.601336e-04	ci right 1.057283e-03	k: 1673	n:1660000
Cons ci ratio: 4.255129e-03	ci left: 3.375784e-01	ci right 3.390185e-01	k: 561575	n:1660000
KS ci ratio: 1.191878e-01	ci left: 6.123858e-04	ci right 6.905782e-04	k: 1080	n:1660000
PVRL4   1660000 perm   1477 sec   (1124 perm/sec)   p_kst 6.506024e-04   p_cons 3.382982e-01   p_joint 1.007831e-03

Joint ci ratio: 9.559006e-02	ci left: 9.578911e-04	ci right 1.054631e-03	k: 1679	n:1670000
Cons ci ratio: 4.242302e-03	ci left: 3.375878e-01	ci right 3.390236e-01	k: 564970	n:1670000
KS ci ratio: 1.189679e-01	ci left: 6.110427e-04	ci right 6.889095e-04	k: 1084	n:1670000
PVRL4   1670000 perm   1493 sec   (1118 perm/sec)   p_kst 6.491018e-04   p_cons 3.383054e-01   p_joint 1.005389e-03

Joint ci ratio: 9.527862e-02	ci left: 9.585807e-04	ci right 1.055057e-03	k: 1690	n:1680000
Cons ci ratio: 4.229354e-03	ci left: 3.376220e-01	ci right 3.390535e-01	k: 568407	n:1680000
KS ci ratio: 1.185317e-01	ci left: 6.120260e-04	ci right 6.897121e-04	k: 1092	n:1680000
PVRL4   1680000 perm   1510 sec   (1113 perm/sec)   p_kst 6.500000e-04   p_cons 3.383375e-01   p_joint 1.005952e-03

Joint ci ratio: 9.485869e-02	ci left: 9.615734e-04	ci right 1.057901e-03	k: 1705	n:1690000
Cons ci ratio: 4.216853e-03	ci left: 3.376210e-01	ci right 3.390482e-01	k: 571785	n:1690000
KS ci ratio: 1.179930e-01	ci left: 6.141467e-04	ci right 6.917231e-04	k: 1102	n:1690000
PVRL4   1690000 perm   1525 sec   (1108 perm/sec)   p_kst 6.520710e-04   p_cons 3.383343e-01   p_joint 1.008876e-03

Joint ci ratio: 9.466476e-02	ci left: 9.599372e-04	ci right 1.055893e-03	k: 1712	n:1700000
Cons ci ratio: 4.203970e-03	ci left: 3.376722e-01	ci right 3.390954e-01	k: 575252	n:1700000
KS ci ratio: 1.177266e-01	ci left: 6.133885e-04	ci right 6.906820e-04	k: 1107	n:1700000
PVRL4   1700000 perm   1541 sec   (1103 perm/sec)   p_kst 6.511765e-04   p_cons 3.383835e-01   p_joint 1.007059e-03

Joint ci ratio: 9.444454e-02	ci left: 9.588912e-04	ci right 1.054508e-03	k: 1720	n:1710000
Cons ci ratio: 4.191226e-03	ci left: 3.377206e-01	ci right 3.391396e-01	k: 578715	n:1710000
KS ci ratio: 1.174619e-01	ci left: 6.126394e-04	ci right 6.896528e-04	k: 1112	n:1710000
PVRL4   1710000 perm   1558 sec   (1098 perm/sec)   p_kst 6.502924e-04   p_cons 3.384298e-01   p_joint 1.005848e-03

Joint ci ratio: 9.417134e-02	ci left: 9.589931e-04	ci right 1.054328e-03	k: 1730	n:1720000
Cons ci ratio: 4.178891e-03	ci left: 3.377370e-01	ci right 3.391519e-01	k: 582124	n:1720000
KS ci ratio: 1.171990e-01	ci left: 6.118992e-04	ci right 6.886355e-04	k: 1117	n:1720000
PVRL4   1720000 perm   1574 sec   (1093 perm/sec)   p_kst 6.494186e-04   p_cons 3.384442e-01   p_joint 1.005814e-03

Joint ci ratio: 9.398159e-02	ci left: 9.574008e-04	ci right 1.052375e-03	k: 1737	n:1730000
Cons ci ratio: 4.166965e-03	ci left: 3.377209e-01	ci right 3.391317e-01	k: 585477	n:1730000
KS ci ratio: 1.169900e-01	ci left: 6.106066e-04	ci right 6.870348e-04	k: 1121	n:1730000
PVRL4   1730000 perm   1591 sec   (1087 perm/sec)   p_kst 6.479769e-04   p_cons 3.384260e-01   p_joint 1.004046e-03

Joint ci ratio: 9.373923e-02	ci left: 9.569495e-04	ci right 1.051621e-03	k: 1746	n:1740000
Cons ci ratio: 4.154713e-03	ci left: 3.377509e-01	ci right 3.391577e-01	k: 588910	n:1740000
KS ci ratio: 1.167302e-01	ci left: 6.098869e-04	ci right 6.860439e-04	k: 1126	n:1740000
PVRL4   1740000 perm   1607 sec   (1082 perm/sec)   p_kst 6.471264e-04   p_cons 3.384540e-01   p_joint 1.003448e-03

Joint ci ratio: 9.347209e-02	ci left: 9.570617e-04	ci right 1.051459e-03	k: 1756	n:1750000
Cons ci ratio: 4.142638e-03	ci left: 3.377732e-01	ci right 3.391759e-01	k: 592330	n:1750000
KS ci ratio: 1.164722e-01	ci left: 6.091757e-04	ci right 6.850641e-04	k: 1131	n:1750000
PVRL4   1750000 perm   1624 sec   (1078 perm/sec)   p_kst 6.462857e-04   p_cons 3.384743e-01   p_joint 1.003429e-03

Joint ci ratio: 9.331300e-02	ci left: 9.549533e-04	ci right 1.048974e-03	k: 1762	n:1760000
Cons ci ratio: 4.130878e-03	ci left: 3.377725e-01	ci right 3.391712e-01	k: 595710	n:1760000
KS ci ratio: 1.163183e-01	ci left: 6.073693e-04	ci right 6.829258e-04	k: 1134	n:1760000
PVRL4   1760000 perm   1641 sec   (1073 perm/sec)   p_kst 6.443182e-04   p_cons 3.384716e-01   p_joint 1.001136e-03

Joint ci ratio: 9.307576e-02	ci left: 9.545243e-04	ci right 1.048251e-03	k: 1771	n:1770000
Cons ci ratio: 4.118905e-03	ci left: 3.378057e-01	ci right 3.392005e-01	k: 599150	n:1770000
KS ci ratio: 1.160630e-01	ci left: 6.066806e-04	ci right 6.819744e-04	k: 1139	n:1770000
PVRL4   1770000 perm   1658 sec   (1068 perm/sec)   p_kst 6.435028e-04   p_cons 3.385028e-01   p_joint 1.000565e-03

Joint ci ratio: 9.289254e-02	ci left: 9.530029e-04	ci right 1.046386e-03	k: 1778	n:1780000
Cons ci ratio: 4.107210e-03	ci left: 3.378194e-01	ci right 3.392103e-01	k: 602556	n:1780000
KS ci ratio: 1.158599e-01	ci left: 6.054543e-04	ci right 6.804555e-04	k: 1143	n:1780000
PVRL4   1780000 perm   1674 sec   (1063 perm/sec)   p_kst 6.421348e-04   p_cons 3.385146e-01   p_joint 9.988764e-04

Joint ci ratio: 9.247745e-02	ci left: 9.564103e-04	ci right 1.049686e-03	k: 1794	n:1790000
Cons ci ratio: 4.095636e-03	ci left: 3.378308e-01	ci right 3.392178e-01	k: 605958	n:1790000
KS ci ratio: 1.153068e-01	ci left: 6.080395e-04	ci right 6.829769e-04	k: 1154	n:1790000
PVRL4   1790000 perm   1691 sec   (1058 perm/sec)   p_kst 6.446927e-04   p_cons 3.385240e-01   p_joint 1.002235e-03

Joint ci ratio: 9.227211e-02	ci left: 9.554387e-04	ci right 1.048401e-03	k: 1802	n:1800000
Cons ci ratio: 4.084199e-03	ci left: 3.378376e-01	ci right 3.392207e-01	k: 609352	n:1800000
KS ci ratio: 1.150084e-01	ci left: 6.078988e-04	ci right 6.826118e-04	k: 1160	n:1800000
PVRL4   1800000 perm   1708 sec   (1054 perm/sec)   p_kst 6.444444e-04   p_cons 3.385289e-01   p_joint 1.001111e-03

Joint ci ratio: 9.196652e-02	ci left: 9.566371e-04	ci right 1.049391e-03	k: 1814	n:1810000
Cons ci ratio: 4.073033e-03	ci left: 3.378250e-01	ci right 3.392043e-01	k: 612711	n:1810000
KS ci ratio: 1.146633e-01	ci left: 6.082966e-04	ci right 6.828189e-04	k: 1167	n:1810000
PVRL4   1810000 perm   1725 sec   (1049 perm/sec)   p_kst 6.447514e-04   p_cons 3.385144e-01   p_joint 1.002210e-03

Joint ci ratio: 9.166395e-02	ci left: 9.578229e-04	ci right 1.050370e-03	k: 1826	n:1820000
Cons ci ratio: 4.061908e-03	ci left: 3.378180e-01	ci right 3.391935e-01	k: 616080	n:1820000
KS ci ratio: 1.142240e-01	ci left: 6.097578e-04	ci right 6.841537e-04	k: 1176	n:1820000
PVRL4   1820000 perm   1743 sec   (1044 perm/sec)   p_kst 6.461538e-04   p_cons 3.385055e-01   p_joint 1.003297e-03

Joint ci ratio: 9.133949e-02	ci left: 9.595302e-04	ci right 1.051897e-03	k: 1839	n:1830000
Cons ci ratio: 4.050266e-03	ci left: 3.378783e-01	ci right 3.392501e-01	k: 619572	n:1830000
KS ci ratio: 1.138377e-01	ci left: 6.106727e-04	ci right 6.849114e-04	k: 1184	n:1830000
PVRL4   1830000 perm   1760 sec   (1040 perm/sec)   p_kst 6.469945e-04   p_cons 3.385639e-01   p_joint 1.004918e-03

Joint ci ratio: 9.109230e-02	ci left: 9.596262e-04	ci right 1.051739e-03	k: 1849	n:1840000
Cons ci ratio: 4.039371e-03	ci left: 3.378662e-01	ci right 3.392343e-01	k: 622932	n:1840000
KS ci ratio: 1.135983e-01	ci left: 6.099939e-04	ci right 6.839837e-04	k: 1189	n:1840000
PVRL4   1840000 perm   1777 sec   (1035 perm/sec)   p_kst 6.461957e-04   p_cons 3.385500e-01   p_joint 1.004891e-03

Joint ci ratio: 9.082266e-02	ci left: 9.602497e-04	ci right 1.052135e-03	k: 1860	n:1850000
Cons ci ratio: 4.028120e-03	ci left: 3.379035e-01	ci right 3.392678e-01	k: 626383	n:1850000
KS ci ratio: 1.132657e-01	ci left: 6.103731e-04	ci right 6.841776e-04	k: 1196	n:1850000
PVRL4   1850000 perm   1795 sec   (1031 perm/sec)   p_kst 6.464865e-04   p_cons 3.385854e-01   p_joint 1.005405e-03

Joint ci ratio: 9.060386e-02	ci left: 9.598160e-04	ci right 1.051426e-03	k: 1869	n:1860000
Cons ci ratio: 4.017426e-03	ci left: 3.378887e-01	ci right 3.392494e-01	k: 629738	n:1860000
KS ci ratio: 1.128890e-01	ci left: 6.112710e-04	ci right 6.849218e-04	k: 1204	n:1860000
PVRL4   1860000 perm   1812 sec   (1026 perm/sec)   p_kst 6.473118e-04   p_cons 3.385688e-01   p_joint 1.004839e-03

Joint ci ratio: 9.021858e-02	ci left: 9.630461e-04	ci right 1.054553e-03	k: 1885	n:1870000
Cons ci ratio: 4.006516e-03	ci left: 3.379078e-01	ci right 3.392649e-01	k: 633156	n:1870000
KS ci ratio: 1.123309e-01	ci left: 6.142386e-04	ci right 6.878569e-04	k: 1216	n:1870000
PVRL4   1870000 perm   1829 sec   (1022 perm/sec)   p_kst 6.502674e-04   p_cons 3.385861e-01   p_joint 1.008021e-03

Joint ci ratio: 9.017098e-02	ci left: 9.589632e-04	ci right 1.050032e-03	k: 1887	n:1880000
Cons ci ratio: 3.995845e-03	ci left: 3.379097e-01	ci right 3.392631e-01	k: 636542	n:1880000
KS ci ratio: 1.123311e-01	ci left: 6.109713e-04	ci right 6.841981e-04	k: 1216	n:1880000
PVRL4   1880000 perm   1847 sec   (1018 perm/sec)   p_kst 6.468085e-04   p_cons 3.385862e-01   p_joint 1.003723e-03

Joint ci ratio: 9.000435e-02	ci left: 9.575096e-04	ci right 1.048263e-03	k: 1894	n:1890000
Cons ci ratio: 3.985274e-03	ci left: 3.379100e-01	ci right 3.392598e-01	k: 639925	n:1890000
KS ci ratio: 1.121470e-01	ci left: 6.097956e-04	ci right 6.827539e-04	k: 1220	n:1890000
PVRL4   1890000 perm   1865 sec   (1013 perm/sec)   p_kst 6.455026e-04   p_cons 3.385847e-01   p_joint 1.002116e-03

Joint ci ratio: 8.981502e-02	ci left: 9.565859e-04	ci right 1.047051e-03	k: 1902	n:1900000
Cons ci ratio: 3.975150e-03	ci left: 3.378692e-01	ci right 3.392155e-01	k: 643230	n:1900000
KS ci ratio: 1.119182e-01	ci left: 6.091440e-04	ci right 6.818657e-04	k: 1225	n:1900000
PVRL4   1900000 perm   1883 sec   (1009 perm/sec)   p_kst 6.447368e-04   p_cons 3.385421e-01   p_joint 1.001053e-03

Joint ci ratio: 8.965036e-02	ci left: 9.551602e-04	ci right 1.045317e-03	k: 1909	n:1910000
Cons ci ratio: 3.964857e-03	ci left: 3.378566e-01	ci right 3.391994e-01	k: 646588	n:1910000
KS ci ratio: 1.116907e-01	ci left: 6.084993e-04	ci right 6.809867e-04	k: 1230	n:1910000
PVRL4   1910000 perm   1900 sec   (1005 perm/sec)   p_kst 6.439791e-04   p_cons 3.385277e-01   p_joint 9.994764e-04

Joint ci ratio: 8.941659e-02	ci left: 9.552772e-04	ci right 1.045197e-03	k: 1919	n:1920000
Cons ci ratio: 3.954529e-03	ci left: 3.378572e-01	ci right 3.391964e-01	k: 649971	n:1920000
KS ci ratio: 1.113744e-01	ci left: 6.088742e-04	ci right 6.811874e-04	k: 1237	n:1920000
PVRL4   1920000 perm   1918 sec   (1001 perm/sec)   p_kst 6.442708e-04   p_cons 3.385266e-01   p_joint 9.994792e-04

Joint ci ratio: 8.916152e-02	ci left: 9.558998e-04	ci right 1.045608e-03	k: 1930	n:1930000
Cons ci ratio: 3.944336e-03	ci left: 3.378515e-01	ci right 3.391873e-01	k: 653342	n:1930000
KS ci ratio: 1.110609e-01	ci left: 6.092455e-04	ci right 6.813857e-04	k: 1244	n:1930000
PVRL4   1930000 perm   1936 sec   (997 perm/sec)   p_kst 6.445596e-04   p_cons 3.385192e-01   p_joint 1.000000e-03

Joint ci ratio: 8.886283e-02	ci left: 9.575244e-04	ci right 1.047069e-03	k: 1943	n:1940000
Cons ci ratio: 3.933855e-03	ci left: 3.378877e-01	ci right 3.392200e-01	k: 656794	n:1940000
KS ci ratio: 1.106616e-01	ci left: 6.106156e-04	ci right 6.826412e-04	k: 1253	n:1940000
PVRL4   1940000 perm   1955 sec   (993 perm/sec)   p_kst 6.458763e-04   p_cons 3.385536e-01   p_joint 1.001546e-03

Joint ci ratio: 8.870334e-02	ci left: 9.561240e-04	ci right 1.045369e-03	k: 1950	n:1950000
Cons ci ratio: 3.923712e-03	ci left: 3.378943e-01	ci right 3.392231e-01	k: 660189	n:1950000
KS ci ratio: 1.104416e-01	ci left: 6.099774e-04	ci right 6.817754e-04	k: 1258	n:1950000
PVRL4   1950000 perm   1973 sec   (988 perm/sec)   p_kst 6.451282e-04   p_cons 3.385585e-01   p_joint 1.000000e-03

Joint ci ratio: 8.852208e-02	ci left: 9.552370e-04	ci right 1.044207e-03	k: 1958	n:1960000
Cons ci ratio: 3.913719e-03	ci left: 3.378926e-01	ci right 3.392181e-01	k: 663568	n:1960000
KS ci ratio: 1.103541e-01	ci left: 6.078575e-04	ci right 6.793456e-04	k: 1260	n:1960000
PVRL4   1960000 perm   1991 sec   (984 perm/sec)   p_kst 6.428571e-04   p_cons 3.385551e-01   p_joint 9.989796e-04

Joint ci ratio: 9.420460e-02	ci left: 8.367953e-04	ci right 9.200131e-04	k: 1729	n:1970000
Cons ci ratio: 3.903851e-03	ci left: 3.378854e-01	ci right 3.392075e-01	k: 666936	n:1970000
KS ci ratio: 1.101796e-01	ci left: 6.067464e-04	ci right 6.779836e-04	k: 1264	n:1970000
PVRL4   1970000 perm   2010 sec   (980 perm/sec)   p_kst 6.416244e-04   p_cons 3.385462e-01   p_joint 8.776650e-04

Joint ci ratio: 9.393348e-02	ci left: 8.375008e-04	ci right 9.205359e-04	k: 1739	n:1980000
Cons ci ratio: 3.894101e-03	ci left: 3.378732e-01	ci right 3.391919e-01	k: 670294	n:1980000
KS ci ratio: 1.099192e-01	ci left: 6.066289e-04	ci right 6.776731e-04	k: 1270	n:1980000
PVRL4   1980000 perm   2028 sec   (976 perm/sec)   p_kst 6.414141e-04   p_cons 3.385323e-01   p_joint 8.782828e-04

Joint ci ratio: 9.374515e-02	ci left: 8.367273e-04	ci right 9.195102e-04	k: 1746	n:1990000
Cons ci ratio: 3.884271e-03	ci left: 3.378787e-01	ci right 3.391941e-01	k: 673687	n:1990000
KS ci ratio: 1.097037e-01	ci left: 6.060240e-04	ci right 6.768493e-04	k: 1275	n:1990000
PVRL4   1990000 perm   2047 sec   (972 perm/sec)   p_kst 6.407035e-04   p_cons 3.385362e-01   p_joint 8.773869e-04

Joint ci ratio: 9.361137e-02	ci left: 8.349850e-04	ci right 9.174712e-04	k: 1751	n:2000000
Cons ci ratio: 3.875004e-03	ci left: 3.378277e-01	ci right 3.391398e-01	k: 676967	n:2000000
KS ci ratio: 1.095751e-01	ci left: 6.044527e-04	ci right 6.750062e-04	k: 1278	n:2000000
PVRL4   2000000 perm   2065 sec   (968 perm/sec)   p_kst 6.390000e-04   p_cons 3.384835e-01   p_joint 8.755000e-04

Joint ci ratio: 9.345155e-02	ci left: 8.337461e-04	ci right 9.159616e-04	k: 1757	n:2010000
Cons ci ratio: 3.865245e-03	ci left: 3.378418e-01	ci right 3.391507e-01	k: 680377	n:2010000
KS ci ratio: 1.093190e-01	ci left: 6.043489e-04	ci right 6.747147e-04	k: 1284	n:2010000
PVRL4   2010000 perm   2084 sec   (964 perm/sec)   p_kst 6.388060e-04   p_cons 3.384960e-01   p_joint 8.741294e-04

Joint ci ratio: 9.323966e-02	ci left: 8.334866e-04	ci right 9.154800e-04	k: 1765	n:2020000
Cons ci ratio: 3.855312e-03	ci left: 3.378845e-01	ci right 3.391902e-01	k: 683845	n:2020000
KS ci ratio: 1.091493e-01	ci left: 6.032831e-04	ci right 6.734088e-04	k: 1288	n:2020000
PVRL4   2020000 perm   2103 sec   (960 perm/sec)   p_kst 6.376238e-04   p_cons 3.385371e-01   p_joint 8.737624e-04

Joint ci ratio: 9.308173e-02	ci left: 8.322675e-04	ci right 9.139948e-04	k: 1771	n:2030000
Cons ci ratio: 3.845687e-03	ci left: 3.378998e-01	ci right 3.392022e-01	k: 687258	n:2030000
KS ci ratio: 1.089804e-01	ci left: 6.022280e-04	ci right 6.721157e-04	k: 1292	n:2030000
PVRL4   2030000 perm   2122 sec   (957 perm/sec)   p_kst 6.364532e-04   p_cons 3.385507e-01   p_joint 8.724138e-04

Joint ci ratio: 9.269011e-02	ci left: 8.353700e-04	ci right 9.170380e-04	k: 1786	n:2040000
Cons ci ratio: 3.836021e-03	ci left: 3.379281e-01	ci right 3.392273e-01	k: 690698	n:2040000
KS ci ratio: 1.086030e-01	ci left: 6.035676e-04	ci right 6.733528e-04	k: 1301	n:2040000
PVRL4   2040000 perm   2141 sec   (953 perm/sec)   p_kst 6.377451e-04   p_cons 3.385775e-01   p_joint 8.754902e-04

Joint ci ratio: 9.240609e-02	ci left: 8.365367e-04	ci right 9.180546e-04	k: 1797	n:2050000
Cons ci ratio: 3.826461e-03	ci left: 3.379522e-01	ci right 3.392483e-01	k: 694130	n:2050000
KS ci ratio: 1.081882e-01	ci left: 6.053692e-04	ci right 6.750784e-04	k: 1311	n:2050000
PVRL4   2050000 perm   2160 sec   (949 perm/sec)   p_kst 6.395122e-04   p_cons 3.386000e-01   p_joint 8.765854e-04

Joint ci ratio: 9.204830e-02	ci left: 8.391152e-04	ci right 9.205508e-04	k: 1811	n:2060000
Cons ci ratio: 3.817216e-03	ci left: 3.379474e-01	ci right 3.392404e-01	k: 697503	n:2060000
KS ci ratio: 1.076560e-01	ci left: 6.085709e-04	ci right 6.782822e-04	k: 1324	n:2060000
PVRL4   2060000 perm   2179 sec   (945 perm/sec)   p_kst 6.427184e-04   p_cons 3.385937e-01   p_joint 8.791262e-04

Joint ci ratio: 9.166952e-02	ci left: 8.421415e-04	ci right 9.235165e-04	k: 1826	n:2070000
Cons ci ratio: 3.807594e-03	ci left: 3.379949e-01	ci right 3.392848e-01	k: 700984	n:2070000
KS ci ratio: 1.072922e-01	ci left: 6.098619e-04	ci right 6.794701e-04	k: 1333	n:2070000
PVRL4   2070000 perm   2198 sec   (942 perm/sec)   p_kst 6.439614e-04   p_cons 3.386396e-01   p_joint 8.821256e-04

Joint ci ratio: 9.154442e-02	ci left: 8.404415e-04	ci right 9.215354e-04	k: 1831	n:2080000
Cons ci ratio: 3.798171e-03	ci left: 3.380270e-01	ci right 3.393138e-01	k: 704434	n:2080000
KS ci ratio: 1.071718e-01	ci left: 6.083335e-04	ci right 6.776844e-04	k: 1336	n:2080000
PVRL4   2080000 perm   2217 sec   (938 perm/sec)   p_kst 6.423077e-04   p_cons 3.386702e-01   p_joint 8.802885e-04

Joint ci ratio: 8.553919e-02	ci left: 9.608806e-04	ci right 1.047210e-03	k: 2097	n:2090000
Cons ci ratio: 3.789663e-03	ci left: 3.379589e-01	ci right 3.392425e-01	k: 707675	n:2090000
KS ci ratio: 1.069720e-01	ci left: 6.077511e-04	ci right 6.768983e-04	k: 1341	n:2090000
PVRL4   2090000 perm   2237 sec   (934 perm/sec)   p_kst 6.416268e-04   p_cons 3.386005e-01   p_joint 1.003349e-03

Joint ci ratio: 8.715529e-02	ci left: 9.204291e-04	ci right 1.004766e-03	k: 2020	n:2100000
Cons ci ratio: 3.780425e-03	ci left: 3.379847e-01	ci right 3.392653e-01	k: 711112	n:2100000
KS ci ratio: 1.066941e-01	ci left: 6.081013e-04	ci right 6.770973e-04	k: 1348	n:2100000
PVRL4   2100000 perm   2257 sec   (931 perm/sec)   p_kst 6.419048e-04   p_cons 3.386248e-01   p_joint 9.619048e-04

Joint ci ratio: 8.689763e-02	ci left: 9.216304e-04	ci right 1.005815e-03	k: 2032	n:2110000
Cons ci ratio: 3.771461e-03	ci left: 3.379856e-01	ci right 3.392632e-01	k: 714497	n:2110000
KS ci ratio: 1.064970e-01	ci left: 6.075258e-04	ci right 6.763212e-04	k: 1353	n:2110000
PVRL4   2110000 perm   2276 sec   (927 perm/sec)   p_kst 6.412322e-04   p_cons 3.386242e-01   p_joint 9.630332e-04

Joint ci ratio: 8.485430e-02	ci left: 9.629793e-04	ci right 1.048771e-03	k: 2131	n:2120000
Cons ci ratio: 3.762421e-03	ci left: 3.380030e-01	ci right 3.392776e-01	k: 717917	n:2120000
KS ci ratio: 1.061837e-01	ci left: 6.083333e-04	ci right 6.770049e-04	k: 1361	n:2120000
PVRL4   2120000 perm   2296 sec   (923 perm/sec)   p_kst 6.419811e-04   p_cons 3.386401e-01   p_joint 1.005189e-03

Joint ci ratio: 8.649440e-02	ci left: 9.217034e-04	ci right 1.005485e-03	k: 2051	n:2130000
Cons ci ratio: 3.753278e-03	ci left: 3.380405e-01	ci right 3.393121e-01	k: 721380	n:2130000
KS ci ratio: 1.059506e-01	ci left: 6.082195e-04	ci right 6.767180e-04	k: 1367	n:2130000
PVRL4   2130000 perm   2316 sec   (920 perm/sec)   p_kst 6.417840e-04   p_cons 3.386761e-01   p_joint 9.629108e-04

Joint ci ratio: 8.649460e-02	ci left: 9.173962e-04	ci right 1.000786e-03	k: 2051	n:2140000
Cons ci ratio: 3.744302e-03	ci left: 3.380654e-01	ci right 3.393341e-01	k: 724817	n:2140000
KS ci ratio: 1.059508e-01	ci left: 6.053773e-04	ci right 6.735559e-04	k: 1367	n:2140000
PVRL4   2140000 perm   2336 sec   (916 perm/sec)   p_kst 6.387850e-04   p_cons 3.386995e-01   p_joint 9.584112e-04

Joint ci ratio: 8.632651e-02	ci left: 9.167698e-04	ci right 9.999326e-04	k: 2059	n:2150000
Cons ci ratio: 3.735894e-03	ci left: 3.380297e-01	ci right 3.392954e-01	k: 728124	n:2150000
KS ci ratio: 1.057192e-01	ci left: 6.052784e-04	ci right 6.732876e-04	k: 1373	n:2150000
PVRL4   2150000 perm   2356 sec   (913 perm/sec)   p_kst 6.386047e-04   p_cons 3.386623e-01   p_joint 9.576744e-04

Joint ci ratio: 8.615941e-02	ci left: 9.161493e-04	ci right 9.990869e-04	k: 2067	n:2160000
Cons ci ratio: 3.727404e-03	ci left: 3.380110e-01	ci right 3.392737e-01	k: 731467	n:2160000
KS ci ratio: 1.055657e-01	ci left: 6.042791e-04	ci right 6.720713e-04	k: 1377	n:2160000
PVRL4   2160000 perm   2376 sec   (909 perm/sec)   p_kst 6.375000e-04   p_cons 3.386421e-01   p_joint 9.569444e-04

Joint ci ratio: 8.595184e-02	ci left: 9.164365e-04	ci right 9.991903e-04	k: 2077	n:2170000
Cons ci ratio: 3.718658e-03	ci left: 3.380302e-01	ci right 3.392900e-01	k: 734892	n:2170000
KS ci ratio: 1.053366e-01	ci left: 6.041865e-04	ci right 6.718121e-04	k: 1383	n:2170000
PVRL4   2170000 perm   2396 sec   (906 perm/sec)   p_kst 6.373272e-04   p_cons 3.386599e-01   p_joint 9.571429e-04

Joint ci ratio: 8.572521e-02	ci left: 9.171703e-04	ci right 9.997610e-04	k: 2088	n:2180000
Cons ci ratio: 3.709860e-03	ci left: 3.380630e-01	ci right 3.393200e-01	k: 738347	n:2180000
KS ci ratio: 1.049580e-01	ci left: 6.058815e-04	ci right 6.734381e-04	k: 1393	n:2180000
PVRL4   2180000 perm   2416 sec   (902 perm/sec)   p_kst 6.389908e-04   p_cons 3.386913e-01   p_joint 9.577982e-04

Joint ci ratio: 8.558199e-02	ci left: 9.161102e-04	ci right 9.984607e-04	k: 2095	n:2190000
Cons ci ratio: 3.701342e-03	ci left: 3.380691e-01	ci right 3.393231e-01	k: 741744	n:2190000
KS ci ratio: 1.048078e-01	ci left: 6.048935e-04	ci right 6.722374e-04	k: 1397	n:2190000
PVRL4   2190000 perm   2436 sec   (899 perm/sec)   p_kst 6.378995e-04   p_cons 3.386959e-01   p_joint 9.566210e-04

Joint ci ratio: 8.529751e-02	ci left: 9.181737e-04	ci right 1.000422e-03	k: 2109	n:2200000
Cons ci ratio: 3.692744e-03	ci left: 3.380919e-01	ci right 3.393431e-01	k: 745178	n:2200000
KS ci ratio: 1.043978e-01	ci left: 6.070132e-04	ci right 6.743125e-04	k: 1408	n:2200000
PVRL4   2200000 perm   2456 sec   (896 perm/sec)   p_kst 6.400000e-04   p_cons 3.387173e-01   p_joint 9.586364e-04

Joint ci ratio: 8.505595e-02	ci left: 9.193333e-04	ci right 1.001440e-03	k: 2121	n:2210000
Cons ci ratio: 3.684429e-03	ci left: 3.380873e-01	ci right 3.393357e-01	k: 748552	n:2210000
KS ci ratio: 1.041026e-01	ci left: 6.077921e-04	ci right 6.749756e-04	k: 1416	n:2210000
PVRL4   2210000 perm   2477 sec   (892 perm/sec)   p_kst 6.407240e-04   p_cons 3.387113e-01   p_joint 9.597285e-04

Joint ci ratio: 8.493602e-02	ci left: 9.178374e-04	ci right 9.996896e-04	k: 2127	n:2220000
Cons ci ratio: 3.676011e-03	ci left: 3.381022e-01	ci right 3.393478e-01	k: 751969	n:2220000
KS ci ratio: 1.039561e-01	ci left: 6.068092e-04	ci right 6.737838e-04	k: 1420	n:2220000
PVRL4   2220000 perm   2497 sec   (889 perm/sec)   p_kst 6.396396e-04   p_cons 3.387248e-01   p_joint 9.581081e-04

Joint ci ratio: 8.481660e-02	ci left: 9.163550e-04	ci right 9.979544e-04	k: 2133	n:2230000
Cons ci ratio: 3.667705e-03	ci left: 3.381102e-01	ci right 3.393530e-01	k: 755371	n:2230000
KS ci ratio: 1.038466e-01	ci left: 6.053984e-04	ci right 6.721426e-04	k: 1423	n:2230000
PVRL4   2230000 perm   2518 sec   (886 perm/sec)   p_kst 6.381166e-04   p_cons 3.387314e-01   p_joint 9.565022e-04

Joint ci ratio: 8.461856e-02	ci left: 9.166338e-04	ci right 9.980580e-04	k: 2143	n:2240000
Cons ci ratio: 3.659875e-03	ci left: 3.380668e-01	ci right 3.393068e-01	k: 758658	n:2240000
KS ci ratio: 1.035561e-01	ci left: 6.061745e-04	ci right 6.728060e-04	k: 1431	n:2240000
PVRL4   2240000 perm   2539 sec   (882 perm/sec)   p_kst 6.388393e-04   p_cons 3.386866e-01   p_joint 9.566964e-04

Joint ci ratio: 8.440229e-02	ci left: 9.173455e-04	ci right 9.986144e-04	k: 2154	n:2250000
Cons ci ratio: 3.651776e-03	ci left: 3.380629e-01	ci right 3.393001e-01	k: 762033	n:2250000
KS ci ratio: 1.033039e-01	ci left: 6.065110e-04	ci right 6.730073e-04	k: 1438	n:2250000
PVRL4   2250000 perm   2559 sec   (879 perm/sec)   p_kst 6.391111e-04   p_cons 3.386813e-01   p_joint 9.573333e-04

Joint ci ratio: 8.410998e-02	ci left: 9.197838e-04	ci right 1.000973e-03	k: 2169	n:2260000
Cons ci ratio: 3.644144e-03	ci left: 3.380082e-01	ci right 3.392426e-01	k: 765293	n:2260000
KS ci ratio: 1.029467e-01	ci left: 6.081381e-04	ci right 6.745682e-04	k: 1448	n:2260000
PVRL4   2260000 perm   2580 sec   (876 perm/sec)   p_kst 6.407080e-04   p_cons 3.386252e-01   p_joint 9.597345e-04

Joint ci ratio: 8.391683e-02	ci left: 9.200447e-04	ci right 1.001061e-03	k: 2179	n:2270000
Cons ci ratio: 3.635938e-03	ci left: 3.380306e-01	ci right 3.392623e-01	k: 768727	n:2270000
KS ci ratio: 1.027696e-01	ci left: 6.076050e-04	ci right 6.738559e-04	k: 1453	n:2270000
PVRL4   2270000 perm   2601 sec   (873 perm/sec)   p_kst 6.400881e-04   p_cons 3.386463e-01   p_joint 9.599119e-04

Joint ci ratio: 8.564498e-02	ci left: 8.786596e-04	ci right 9.577046e-04	k: 2092	n:2280000
Cons ci ratio: 3.627908e-03	ci left: 3.380379e-01	ci right 3.392669e-01	k: 772127	n:2280000
KS ci ratio: 1.025582e-01	ci left: 6.075041e-04	ci right 6.735995e-04	k: 1459	n:2280000
PVRL4   2280000 perm   2622 sec   (869 perm/sec)   p_kst 6.399123e-04   p_cons 3.386522e-01   p_joint 9.175439e-04

Joint ci ratio: 8.355352e-02	ci left: 9.201325e-04	ci right 1.000789e-03	k: 2198	n:2290000
Cons ci ratio: 3.620262e-03	ci left: 3.380041e-01	ci right 3.392304e-01	k: 775433	n:2290000
KS ci ratio: 1.023831e-01	ci left: 6.069787e-04	ci right 6.728974e-04	k: 1464	n:2290000
PVRL4   2290000 perm   2643 sec   (866 perm/sec)   p_kst 6.393013e-04   p_cons 3.386170e-01   p_joint 9.598253e-04

Joint ci ratio: 8.523867e-02	ci left: 8.795289e-04	ci right 9.582581e-04	k: 2112	n:2300000
Cons ci ratio: 3.612629e-03	ci left: 3.379749e-01	ci right 3.391985e-01	k: 778749	n:2300000
KS ci ratio: 1.021741e-01	ci left: 6.068816e-04	ci right 6.726471e-04	k: 1470	n:2300000
PVRL4   2300000 perm   2665 sec   (863 perm/sec)   p_kst 6.391304e-04   p_cons 3.385865e-01   p_joint 9.182609e-04

Joint ci ratio: 8.501762e-02	ci left: 8.803820e-04	ci right 9.589731e-04	k: 2123	n:2310000
Cons ci ratio: 3.604874e-03	ci left: 3.379672e-01	ci right 3.391882e-01	k: 782114	n:2310000
KS ci ratio: 1.019663e-01	ci left: 6.067855e-04	ci right 6.723989e-04	k: 1476	n:2310000
PVRL4   2310000 perm   2686 sec   (860 perm/sec)   p_kst 6.389610e-04   p_cons 3.385775e-01   p_joint 9.190476e-04

Joint ci ratio: 8.481818e-02	ci left: 8.808061e-04	ci right 9.592414e-04	k: 2133	n:2320000
Cons ci ratio: 3.597262e-03	ci left: 3.379480e-01	ci right 3.391662e-01	k: 785452	n:2320000
KS ci ratio: 1.018286e-01	ci left: 6.058502e-04	ci right 6.712687e-04	k: 1480	n:2320000
PVRL4   2320000 perm   2707 sec   (857 perm/sec)   p_kst 6.379310e-04   p_cons 3.385569e-01   p_joint 9.193966e-04

Joint ci ratio: 8.280378e-02	ci left: 9.211466e-04	ci right 1.001132e-03	k: 2238	n:2330000
Cons ci ratio: 3.589326e-03	ci left: 3.379752e-01	ci right 3.391909e-01	k: 788898	n:2330000
KS ci ratio: 1.017257e-01	ci left: 6.045048e-04	ci right 6.697081e-04	k: 1483	n:2330000
PVRL4   2330000 perm   2728 sec   (854 perm/sec)   p_kst 6.364807e-04   p_cons 3.385828e-01   p_joint 9.605150e-04

Joint ci ratio: 8.452171e-02	ci left: 8.795523e-04	ci right 9.575887e-04	k: 2148	n:2340000
Cons ci ratio: 3.581716e-03	ci left: 3.379680e-01	ci right 3.391811e-01	k: 792264	n:2340000
KS ci ratio: 1.015889e-01	ci left: 6.035873e-04	ci right 6.685990e-04	k: 1487	n:2340000
PVRL4   2340000 perm   2750 sec   (851 perm/sec)   p_kst 6.354701e-04   p_cons 3.385744e-01   p_joint 9.179487e-04

Joint ci ratio: 8.256454e-02	ci left: 9.187245e-04	ci right 9.982582e-04	k: 2251	n:2350000
Cons ci ratio: 3.574111e-03	ci left: 3.379664e-01	ci right 3.391769e-01	k: 795643	n:2350000
KS ci ratio: 1.014527e-01	ci left: 6.026778e-04	ci right 6.674992e-04	k: 1491	n:2350000
PVRL4   2350000 perm   2772 sec   (848 perm/sec)   p_kst 6.344681e-04   p_cons 3.385715e-01   p_joint 9.578723e-04

Joint ci ratio: 8.241831e-02	ci left: 9.181515e-04	ci right 9.974880e-04	k: 2259	n:2360000
Cons ci ratio: 3.566199e-03	ci left: 3.380094e-01	ci right 3.392173e-01	k: 799127	n:2360000
KS ci ratio: 1.012493e-01	ci left: 6.026020e-04	ci right 6.672776e-04	k: 1497	n:2360000
PVRL4   2360000 perm   2793 sec   (845 perm/sec)   p_kst 6.343220e-04   p_cons 3.386131e-01   p_joint 9.572034e-04

Joint ci ratio: 8.223657e-02	ci left: 9.184100e-04	ci right 9.975854e-04	k: 2269	n:2370000
Cons ci ratio: 3.558671e-03	ci left: 3.380101e-01	ci right 3.392156e-01	k: 802512	n:2370000
KS ci ratio: 1.010136e-01	ci left: 6.029382e-04	ci right 6.674904e-04	k: 1504	n:2370000
PVRL4   2370000 perm   2815 sec   (842 perm/sec)   p_kst 6.345992e-04   p_cons 3.386127e-01   p_joint 9.573840e-04

Joint ci ratio: 8.389944e-02	ci left: 8.779321e-04	ci right 9.552233e-04	k: 2180	n:2380000
Cons ci ratio: 3.551191e-03	ci left: 3.380109e-01	ci right 3.392138e-01	k: 805897	n:2380000
KS ci ratio: 1.007461e-01	ci left: 6.036814e-04	ci right 6.681319e-04	k: 1512	n:2380000
PVRL4   2380000 perm   2838 sec   (839 perm/sec)   p_kst 6.352941e-04   p_cons 3.386122e-01   p_joint 9.159664e-04

Joint ci ratio: 8.182302e-02	ci left: 9.201506e-04	ci right 9.990582e-04	k: 2292	n:2390000
Cons ci ratio: 3.543671e-03	ci left: 3.380226e-01	ci right 3.392230e-01	k: 809308	n:2390000
KS ci ratio: 1.004808e-01	ci left: 6.044186e-04	ci right 6.687678e-04	k: 1520	n:2390000
PVRL4   2390000 perm   2859 sec   (836 perm/sec)   p_kst 6.359833e-04   p_cons 3.386226e-01   p_joint 9.589958e-04

Joint ci ratio: 8.175184e-02	ci left: 9.179492e-04	ci right 9.965962e-04	k: 2296	n:2400000
Cons ci ratio: 3.536209e-03	ci left: 3.380329e-01	ci right 3.392308e-01	k: 812716	n:2400000
KS ci ratio: 1.004149e-01	ci left: 6.027126e-04	ci right 6.668356e-04	k: 1522	n:2400000
PVRL4   2400000 perm   2881 sec   (833 perm/sec)   p_kst 6.341667e-04   p_cons 3.386317e-01   p_joint 9.566667e-04

Joint ci ratio: 8.159216e-02	ci left: 9.177985e-04	ci right 9.962717e-04	k: 2305	n:2410000
Cons ci ratio: 3.528892e-03	ci left: 3.380307e-01	ci right 3.392261e-01	k: 816094	n:2410000
KS ci ratio: 1.001522e-01	ci left: 6.034480e-04	ci right 6.674713e-04	k: 1530	n:2410000
PVRL4   2410000 perm   2903 sec   (830 perm/sec)   p_kst 6.348548e-04   p_cons 3.386282e-01   p_joint 9.564315e-04

Joint ci ratio: 8.141582e-02	ci left: 9.180539e-04	ci right 9.963713e-04	k: 2315	n:2420000
Cons ci ratio: 3.521448e-03	ci left: 3.380504e-01	ci right 3.392433e-01	k: 819525	n:2420000
KS ci ratio: 9.998906e-02	ci left: 6.029688e-04	ci right 6.668310e-04	k: 1535	n:2420000
PVRL4   2420000 perm   2925 sec   (827 perm/sec)   p_kst 6.342975e-04   p_cons 3.386467e-01   p_joint 9.566116e-04

Outputting figure to mutsig2_images.part000000000141/PVRL4.2_1569_2420000_0.0006343_0.33865_0.00095661.png
                gene_name: PVRL4
               theta_stop: 0.100 
                    nperm: 2420000 
                     p_ks: 0.00063 
        ci_ks_bounds_left: 0.00060 
       ci_ks_bounds_right: 0.00067 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.34 
                  p_joint: 0.00096 
     ci_joint_bounds_left: 0.00092 
    ci_joint_bounds_right: 0.00100 

Current progress: 88 percent done.
PWP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.487243e-02	ci left: 3.285285e-01	ci right 3.471661e-01	k: 3378	n:10000
Cons ci ratio: 3.728889e-02	ci left: 5.150563e-01	ci right 5.347292e-01	k: 5249	n:10000
KS ci ratio: 5.439761e-02	ci left: 3.324015e-01	ci right 3.510908e-01	k: 3417	n:10000
PWP2   10000 perm   2 sec   (5493 perm/sec)   p_kst 3.417000e-01   p_cons 5.249000e-01   p_joint 3.378000e-01

Outputting figure to mutsig2_images.part000000000141/PWP2.2_2844_10000_0.3417_0.5249_0.3378.png
                gene_name: PWP2
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.34 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.35 
                   p_cons: 0.52 
      ci_cons_bounds_left: 0.52 
     ci_cons_bounds_right: 0.53 
                  p_joint: 0.34 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.35 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000141
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 141 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1648>
Subject: Job 8704318: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1648>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000142> was used as the working directory.
Started at Thu Nov 15 19:36:03 2012
Results reported at Thu Nov 15 19:38:05 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000142.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000142.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 142  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000142.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    146.98 sec.
    Max Memory :      5450 MB
    Max Swap   :      8291 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
142
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 142
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 142: processing genes 12757 - 12846
Calculating significance of each gene.
Using projection method.
12757	QTRT1	1
12758	QTRTD1	1
12759	R3HDM1	1
12760	R3HDM2	1
12761	R3HDML	1
12762	RAB10	1
12763	RAB11A	1
12764	RAB11B	1
In gene RAB11FIP1 the following bins exceed PROBCAP:
    THCA-EM-A3O6-TP	categ 6	N = 3687    n = 1	mu =   1.35e-07
12765	RAB11FIP1	1.110181e-01
12766	RAB11FIP2	8.970727e-02
12767	RAB11FIP3	1
12768	RAB11FIP4	1
12769	RAB11FIP5	1.627240e-02
12770	RAB12	1
12771	RAB13	1
12772	RAB14	1
12773	RAB15	1
12774	RAB17	1
12775	RAB18	1
12776	RAB19	1
12777	RAB1A	1
12778	RAB1B	1
12779	RAB20	1
12780	RAB21	1
12781	RAB22A	1
12782	RAB23	1
12783	RAB24	1
12784	RAB25	1
12785	RAB26	1
12786	RAB27A	1.733592e-02
12787	RAB27B	1
12788	RAB28	1
12789	RAB2A	1
12790	RAB2B	1
12791	RAB30	1
12792	RAB31	1
12793	RAB32	1.103157e-01
12794	RAB33A	1
12795	RAB33B	1
12796	RAB34	1
12797	RAB35	1
12798	RAB36	1.701848e-01
12799	RAB37	2.774504e-02
12800	RAB38	1
12801	RAB39	1
12802	RAB39B	1
12803	RAB3A	1
12804	RAB3B	1
12805	RAB3C	6.216381e-02
12806	RAB3D	6.739467e-02
In gene RAB3GAP1 the following bins exceed PROBCAP:
    THCA-EL-A3GP-TP	categ 6	N = 3042    n = 1	mu =   1.00e-07
12807	RAB3GAP1	1.704269e-01
12808	RAB3GAP2	1
12809	RAB3IL1	1
12810	RAB3IP	1.175236e-01
12811	RAB40A	1
12812	RAB40AL	1
12813	RAB40B	1
12814	RAB40C	7.316226e-03
12815	RAB41	3.784906e-02
12816	RAB42	1
12817	RAB43	1
12818	RAB4A	1
12819	RAB4B	1
12820	RAB5A	1
12821	RAB5B	1
12822	RAB5C	8.403933e-02
12823	RAB6A	1
12824	RAB6B	1
12825	RAB6C	1
12826	RAB7A	1
12827	RAB7L1	1
12828	RAB8A	1
12829	RAB8B	1
12830	RAB9A	1
12831	RAB9B	1
12832	RABAC1	1
In gene RABEP1 the following bins exceed PROBCAP:
    THCA-ET-A25K-TP	categ 6	N = 2532    n = 1	mu =   3.40e-08
12833	RABEP1	7.164431e-02
12834	RABEP2	5.791632e-02
12835	RABEPK	1
12836	RABGAP1	1
12837	RABGAP1L	1
12838	RABGEF1	1
12839	RABGGTA	1
12840	RABGGTB	1
12841	RABIF	1
12842	RABL2A	1
12843	RABL2B	1
12844	RABL3	1
12845	RABL5	1
12846	RAC1	1
Done

Running MutSig 2:
Scatter job 142: processing genes 12757 - 12846
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RAB11FIP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.434992e-02	ci left: 1.402112e-01	ci right 1.541950e-01	k: 1471	n:10000
Cons ci ratio: 9.821609e-02	ci left: 1.306108e-01	ci right 1.442011e-01	k: 1373	n:10000
KS ci ratio: 1.029115e-01	ci left: 1.201421e-01	ci right 1.332762e-01	k: 1266	n:10000
RAB11FIP1   10000 perm   2 sec   (5411 perm/sec)   p_kst 1.266000e-01   p_cons 1.373000e-01   p_joint 1.471000e-01

Joint ci ratio: 8.020090e-02	ci left: 1.024046e-01	ci right 1.110102e-01	k: 2133	n:20000
Cons ci ratio: 6.950910e-02	ci left: 1.324104e-01	ci right 1.419953e-01	k: 2743	n:20000
KS ci ratio: 7.139006e-02	ci left: 1.263036e-01	ci right 1.357040e-01	k: 2619	n:20000
RAB11FIP1   20000 perm   6 sec   (3261 perm/sec)   p_kst 1.309500e-01   p_cons 1.371500e-01   p_joint 1.066500e-01

Outputting figure to mutsig2_images.part000000000142/RAB11FIP1.2_3876_20000_0.13095_0.13715_0.10665.png
                gene_name: RAB11FIP1
               theta_stop: 0.080 
                    nperm: 20000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.13 
       ci_ks_bounds_right: 0.14 
                   p_cons: 0.14 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.14 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.10 
    ci_joint_bounds_right: 0.11 

Current progress: 33 percent done.
RAB11FIP5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.399478e-02	ci left: 8.806319e-01	ci right 8.931418e-01	k: 8870	n:10000
Cons ci ratio: 9.563197e-03	ci left: 9.392090e-01	ci right 9.483304e-01	k: 9439	n:10000
KS ci ratio: 5.938332e-02	ci left: 2.943978e-01	ci right 3.125168e-01	k: 3034	n:10000
RAB11FIP5   10000 perm   2 sec   (6426 perm/sec)   p_kst 3.034000e-01   p_cons 9.439000e-01   p_joint 8.870000e-01

Outputting figure to mutsig2_images.part000000000142/RAB11FIP5.2_1982_10000_0.3034_0.9439_0.887.png
                gene_name: RAB11FIP5
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.30 
        ci_ks_bounds_left: 0.29 
       ci_ks_bounds_right: 0.31 
                   p_cons: 0.94 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 0.89 
     ci_joint_bounds_left: 0.88 
    ci_joint_bounds_right: 0.89 

Current progress: 67 percent done.
RAB40C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.737426e-02	ci left: 2.443046e-01	ci right 2.614396e-01	k: 2528	n:10000
KS ci ratio: 3.446865e-02	ci left: 5.541131e-01	ci right 5.736497e-01	k: 5639	n:10000
RAB40C   10000 perm   1 sec   (7077 perm/sec)   p_kst 5.639000e-01   p_cons 2.528000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000142/RAB40C.2_870_10000_0.5639_0.2528_1.png
                gene_name: RAB40C
               theta_stop: 0.067 
                    nperm: 10000 
                     p_ks: 0.56 
        ci_ks_bounds_left: 0.55 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.25 
      ci_cons_bounds_left: 0.24 
     ci_cons_bounds_right: 0.26 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000142
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 142 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1714>
Subject: Job 8704320: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1714>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000143> was used as the working directory.
Started at Thu Nov 15 19:36:03 2012
Results reported at Thu Nov 15 19:38:33 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000143.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000143.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 143  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000143.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    176.47 sec.
    Max Memory :      5517 MB
    Max Swap   :      8348 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
143
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 143
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 143: processing genes 12847 - 12936
Calculating significance of each gene.
Using projection method.
12847	RAC2	1
12848	RAC3	1
12849	RACGAP1	1
12850	RAD1	1
12851	RAD17	1
12852	RAD18	1.189468e-01
12853	RAD21	1
12854	RAD23A	1
12855	RAD23B	1
12856	RAD50	1
12857	RAD51	4.848409e-02
12858	RAD51AP1	1
12859	RAD51AP2	1.260601e-01
12860	RAD51C	1
12861	RAD51L1	1
12862	RAD51L3	1
12863	RAD52	1
12864	RAD54B	1
12865	RAD54L	1
12866	RAD54L2	1.065087e-01
12867	RAD9A	1
12868	RAD9B	1
12869	RADIL	1
12870	RAE1	1
12871	RAET1E	1
12872	RAET1G	1
12873	RAET1L	1
12874	RAF1	1
12875	RAG1	1
12876	RAG1AP1	1
12877	RAG2	1
12878	RAGE	1
12879	RAI1	4.232222e-01
12880	RAI14	1
12881	RAI2	1
12882	RALA	1
12883	RALB	1
12884	RALBP1	1
12885	RALGAPA1	1
12886	RALGAPA2	1
12887	RALGAPB	1
12888	RALGDS	1
12889	RALGPS1	1
12890	RALGPS2	8.185950e-02
12891	RALY	1
12892	RALYL	7.749878e-02
12893	RAMP1	1
12894	RAMP2	1
12895	RAMP3	1
12896	RAN	1
12897	RANBP1	1
12898	RANBP10	9.748043e-02
12899	RANBP17	1
12900	RANBP2	6.049104e-01
12901	RANBP3	1
12902	RANBP3L	1.285134e-01
12903	RANBP6	1
12904	RANBP9	1
12905	RANGAP1	1
12906	RANGRF	1
12907	RAP1A	1
12908	RAP1B	1
12909	RAP1GAP	2.269785e-01
12910	RAP1GAP2	1
12911	RAP1GDS1	1
12912	RAP2A	7.599950e-02
12913	RAP2B	1
12914	RAP2C	1
12915	RAPGEF1	2.628624e-01
12916	RAPGEF2	1
12917	RAPGEF3	1
12918	RAPGEF4	1
12919	RAPGEF5	1
12920	RAPGEF6	7.091821e-02
12921	RAPGEFL1	1.991376e-01
12922	RAPH1	3.819197e-02
12923	RAPSN	1
12924	RARA	1
12925	RARB	1
12926	RARG	1
12927	RARRES1	1
12928	RARRES2	1
12929	RARRES3	1
12930	RARS	1
12931	RARS2	1
12932	RASA1	1
12933	RASA2	1
12934	RASA3	1
12935	RASAL1	1
12936	RASAL2	1
Done

Running MutSig 2:
Scatter job 143: processing genes 12847 - 12936
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RAD54L2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.950997e-02	ci left: 2.935057e-01	ci right 3.116095e-01	k: 3025	n:10000
Cons ci ratio: 1.359049e-01	ci left: 7.155808e-02	ci right 8.209001e-02	k: 767	n:10000
KS ci ratio: 3.519609e-02	ci left: 5.437922e-01	ci right 5.633765e-01	k: 5536	n:10000
RAD54L2   10000 perm   2 sec   (4987 perm/sec)   p_kst 5.536000e-01   p_cons 7.670000e-02   p_joint 3.025000e-01

Joint ci ratio: 4.262465e-02	ci left: 2.908212e-01	ci right 3.035378e-01	k: 5943	n:20000
Cons ci ratio: 9.451095e-02	ci left: 7.544481e-02	ci right 8.297806e-02	k: 1583	n:20000
KS ci ratio: 2.522308e-02	ci left: 5.400697e-01	ci right 5.539166e-01	k: 10940	n:20000
RAD54L2   20000 perm   8 sec   (2503 perm/sec)   p_kst 5.470000e-01   p_cons 7.915000e-02   p_joint 2.971500e-01

Outputting figure to mutsig2_images.part000000000143/RAD54L2.2_4488_20000_0.547_0.07915_0.29715.png
                gene_name: RAD54L2
               theta_stop: 0.095 
                    nperm: 20000 
                     p_ks: 0.55 
        ci_ks_bounds_left: 0.54 
       ci_ks_bounds_right: 0.55 
                   p_cons: 0.079 
      ci_cons_bounds_left: 0.075 
     ci_cons_bounds_right: 0.083 
                  p_joint: 0.30 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.30 

Current progress: 33 percent done.
RAPGEF6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.430079e-02	ci left: 5.565186e-01	ci right 5.760428e-01	k: 5663	n:10000
KS ci ratio: 2.642698e-02	ci left: 6.783117e-01	ci right 6.965790e-01	k: 6875	n:10000
RAPGEF6   10000 perm   2 sec   (4950 perm/sec)   p_kst 6.875000e-01   p_cons 5.663000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000143/RAPGEF6.2_5404_10000_0.6875_0.5663_1.png
                gene_name: RAPGEF6
               theta_stop: 0.034 
                    nperm: 10000 
                     p_ks: 0.69 
        ci_ks_bounds_left: 0.68 
       ci_ks_bounds_right: 0.70 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
RAPH1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.797060e-03	ci left: 9.887288e-01	ci right 9.925772e-01	k: 9908	n:10000
Cons ci ratio: 2.174454e-02	ci left: 7.562597e-01	ci right 7.729859e-01	k: 7647	n:10000
KS ci ratio: 2.203437e-02	ci left: 7.514032e-01	ci right 7.682452e-01	k: 7599	n:10000
RAPH1   10000 perm   2 sec   (5452 perm/sec)   p_kst 7.599000e-01   p_cons 7.647000e-01   p_joint 9.908000e-01

Outputting figure to mutsig2_images.part000000000143/RAPH1.2_3976_10000_0.7599_0.7647_0.9908.png
                gene_name: RAPH1
               theta_stop: 0.022 
                    nperm: 10000 
                     p_ks: 0.76 
        ci_ks_bounds_left: 0.75 
       ci_ks_bounds_right: 0.77 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.76 
     ci_cons_bounds_right: 0.77 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000143
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 143 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1654>
Subject: Job 8704321: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1654>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000144> was used as the working directory.
Started at Thu Nov 15 19:36:03 2012
Results reported at Thu Nov 15 19:38:06 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000144.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000144.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 144  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000144.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    148.22 sec.
    Max Memory :      4651 MB
    Max Swap   :      7558 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
144
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 144
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 144: processing genes 12937 - 13027
Calculating significance of each gene.
Using projection method.
12937	RASAL3	1
12938	RASD1	1
12939	RASD2	1.182056e-01
12940	RASEF	1
12941	RASGEF1A	1
12942	RASGEF1B	1.997392e-01
12943	RASGEF1C	1
12944	RASGRF1	1
12945	RASGRF2	2.008740e-01
12946	RASGRP1	2.658693e-01
12947	RASGRP2	1
12948	RASGRP3	1
12949	RASGRP4	1
12950	RASIP1	1
12951	RASL10A	1
12952	RASL10B	1
12953	RASL11A	1
12954	RASL11B	1
12955	RASL12	1
12956	RASSF1	1.206280e-01
12957	RASSF10	1
12958	RASSF2	1.089875e-01
12959	RASSF3	1
12960	RASSF4	1
12961	RASSF5	1
12962	RASSF6	1
12963	RASSF7	1
12964	RASSF8	1
12965	RASSF9	1
12966	RAVER1	1
12967	RAVER2	1
12968	RAX	1
12969	RAX2	1
12970	RB1	1
12971	RB1CC1	1
12972	RBAK	1
12973	RBBP4	1.546956e-01
12974	RBBP5	1
In gene RBBP6 the following bins exceed PROBCAP:
    THCA-DJ-A2PZ-TP	categ 6	N = 5334    n = 1	mu =   1.02e-07
12975	RBBP6	3.215962e-01
12976	RBBP7	1
12977	RBBP8	1.890423e-01
12978	RBBP9	1
12979	RBCK1	1
12980	RBKS	1
12981	RBL1	1
12982	RBL2	1.827259e-01
12983	RBM10	1
12984	RBM11	1
12985	RBM12	1
12986	RBM12B	2.862683e-01
12987	RBM14	1
12988	RBM15	3.255287e-01
12989	RBM15B	1
12990	RBM16	1.916924e-01
12991	RBM17	9.604112e-02
12992	RBM18	1
12993	RBM19	2.031650e-01
12994	RBM22	1
12995	RBM23	1
12996	RBM24	1
12997	RBM25	1
12998	RBM26	1
12999	RBM27	1.338145e-01
13000/18093 13000	RBM28	1.937412e-01
13001	RBM3	1
13002	RBM33	1
13003	RBM34	1
13004	RBM38	1
13005	RBM39	1
13006	RBM4	1
13007	RBM41	1
13008	RBM42	1
13009	RBM43	1
13010	RBM44	1
13011	RBM45	1
13012	RBM46	1
13013	RBM47	9.025987e-02
13014	RBM4B	1.417820e-01
13015	RBM5	1
In gene RBM6 the following bins exceed PROBCAP:
    THCA-BJ-A28S-TP	categ 6	N = 3451    n = 1	mu =   2.86e-07
13016	RBM6	7.824104e-02
13017	RBM7	9.066048e-03
13018	RBM8A	1
13019	RBM9	1
13020	RBMS1	1
13021	RBMS2	1
13022	RBMS3	1
13023	RBMX	1
13024	RBMX2	1
13025	RBMXL1	1
13026	RBMXL2	1
13027	RBP1	1
Done

Running MutSig 2:
Scatter job 144: processing genes 12937 - 13027
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RBM6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.081773e-02	ci left: 9.241000e-01	ci right 9.342483e-01	k: 9293	n:10000
Cons ci ratio: 6.256426e-02	ci left: 2.729972e-01	ci right 2.907301e-01	k: 2818	n:10000
KS ci ratio: 5.005077e-02	ci left: 3.705722e-01	ci right 3.896977e-01	k: 3801	n:10000
RBM6   10000 perm   2 sec   (4244 perm/sec)   p_kst 3.801000e-01   p_cons 2.818000e-01   p_joint 9.293000e-01

Outputting figure to mutsig2_images.part000000000144/RBM6.2_3452_10000_0.3801_0.2818_0.9293.png
                gene_name: RBM6
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.39 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.93 
     ci_joint_bounds_left: 0.92 
    ci_joint_bounds_right: 0.93 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000144
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 144 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1643>
Subject: Job 8704323: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1643>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000145> was used as the working directory.
Started at Thu Nov 15 19:36:03 2012
Results reported at Thu Nov 15 19:38:25 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000145.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000145.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 145  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000145.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    169.61 sec.
    Max Memory :      5511 MB
    Max Swap   :      8349 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
145
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 145
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 145: processing genes 13028 - 13117
Calculating significance of each gene.
Using projection method.
13028	RBP2	1
13029	RBP3	1
13030	RBP4	1
13031	RBP5	1
13032	RBP7	1
13033	RBPJ	2.144263e-01
13034	RBPJL	1
13035	RBPMS	1
13036	RBPMS2	1
13037	RBX1	1
13038	RC3H1	2.495150e-01
13039	RC3H2	1.431613e-01
13040	RCAN1	1
13041	RCAN2	1
13042	RCAN3	1
13043	RCBTB1	1
13044	RCBTB2	1
13045	RCC1	2.009189e-02
13046	RCC2	1
13047	RCCD1	1
13048	RCE1	1
13049	RCHY1	1
13050	RCL1	1
13051	RCN1	1
13052	RCN2	1
13053	RCN3	1
13054	RCOR1	1
13055	RCOR2	1
13056	RCOR3	1
13057	RCSD1	1
13058	RCVRN	1
13059	RD3	1
13060	RDBP	1
13061	RDH10	2.797951e-02
13062	RDH11	1
13063	RDH12	1
13064	RDH13	1
13065	RDH14	1
13066	RDH16	1
13067	RDH5	1
13068	RDH8	1
13069	RDM1	1
13070	RDX	1
13071	REC8	1
13072	RECK	3.483787e-01
13073	RECQL	1
13074	RECQL4	1
13075	RECQL5	1
13076	REEP1	1
13077	REEP2	1
13078	REEP3	8.141734e-02
13079	REEP4	1
13080	REEP5	1
13081	REEP6	1
13082	REG1A	1
13083	REG1B	1
13084	REG3A	1
13085	REG3G	1
13086	REG4	1
13087	REL	1
13088	RELA	1
13089	RELB	1
13090	RELL1	1
13091	RELL2	1
13092	RELN	6.546855e-01
13093	RELT	1
13094	REM1	1
13095	REM2	1
13096	REN	1
13097	RENBP	1.083307e-01
13098	REP15	1
13099	REPIN1	1
13100	REPS1	1
13101	REPS2	1
13102	RER1	1
13103	RERE	2.788661e-01
13104	RERG	1
13105	RERGL	9.028595e-02
13106	REST	1
13107	RET	1
13108	RETN	3.014027e-03
13109	RETNLB	1
13110	RETSAT	1
13111	REV1	1
13112	REV3L	5.917761e-01
13113	REXO1	3.099571e-01
13114	REXO2	1
13115	REXO4	1
13116	RFC1	1
13117	RFC2	1
Done

Running MutSig 2:
Scatter job 145: processing genes 13028 - 13117
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RCC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.298081e-02	ci left: 2.156624e-01	ci right 2.320987e-01	k: 2238	n:10000
Cons ci ratio: 1.330186e-01	ci left: 7.456177e-02	ci right 8.528446e-02	k: 798	n:10000
KS ci ratio: 9.294744e-02	ci left: 1.439367e-01	ci right 1.580673e-01	k: 1509	n:10000
RCC1   10000 perm   2 sec   (6303 perm/sec)   p_kst 1.509000e-01   p_cons 7.980000e-02   p_joint 2.238000e-01

Joint ci ratio: 5.105519e-02	ci left: 2.218041e-01	ci right 2.334752e-01	k: 4552	n:20000
Cons ci ratio: 9.480375e-02	ci left: 7.500461e-02	ci right 8.251839e-02	k: 1574	n:20000
KS ci ratio: 6.501634e-02	ci left: 1.487765e-01	ci right 1.588244e-01	k: 3075	n:20000
RCC1   20000 perm   6 sec   (3577 perm/sec)   p_kst 1.537500e-01   p_cons 7.870000e-02   p_joint 2.276000e-01

Outputting figure to mutsig2_images.part000000000145/RCC1.2_1399_20000_0.15375_0.0787_0.2276.png
                gene_name: RCC1
               theta_stop: 0.095 
                    nperm: 20000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.079 
      ci_cons_bounds_left: 0.075 
     ci_cons_bounds_right: 0.083 
                  p_joint: 0.23 
     ci_joint_bounds_left: 0.22 
    ci_joint_bounds_right: 0.23 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000145
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 145 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1420>
Subject: Job 8704324: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1420>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000146> was used as the working directory.
Started at Thu Nov 15 19:36:17 2012
Results reported at Thu Nov 15 19:39:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000146.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000146.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 146  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000146.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    262.61 sec.
    Max Memory :      6049 MB
    Max Swap   :      8925 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
146
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 146
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 146: processing genes 13118 - 13208
Calculating significance of each gene.
Using projection method.
13118	RFC3	1
13119	RFC4	1
13120	RFC5	1
13121	RFESD	1
13122	RFFL	1
13123	RFK	1
13124	RFNG	1
13125	RFPL1	9.149131e-02
13126	RFPL2	1
13127	RFPL3	1
13128	RFPL4B	1
13129	RFT1	1
13130	RFTN1	1
13131	RFTN2	1
13132	RFWD2	1
13133	RFWD3	1
13134	RFX1	1
13135	RFX2	1
13136	RFX3	1
13137	RFX4	1
13138	RFX5	2.687163e-01
13139	RFX6	1
13140	RFX7	1
13141	RFXANK	1
13142	RFXAP	1
13143	RG9MTD1	1
13144	RG9MTD2	1
13145	RG9MTD3	1
13146	RGAG1	1
13147	RGAG4	1
13148	RGL1	1
13149	RGL2	6.590367e-02
13150	RGL3	1
13151	RGL4	1
13152	RGMA	1
13153	RGMB	1.411640e-01
13154	RGN	1
13155	RGNEF	1
13156	RGP1	1
In gene RGPD3 the following bins exceed PROBCAP:
    THCA-EL-A3CX-TP	categ 6	N = 3232    n = 1	mu =   1.07e-07
13157	RGPD3	7.897534e-03
13158	RGPD4	2.098662e-01
13159	RGPD8	1
13160	RGR	1
13161	RGS1	1
13162	RGS10	1
13163	RGS11	1
13164	RGS12	4.653897e-01
13165	RGS13	1
13166	RGS14	1
13167	RGS16	1
13168	RGS17	1
13169	RGS18	1
13170	RGS19	1
13171	RGS2	1
13172	RGS20	1
13173	RGS21	2.525216e-03
13174	RGS22	1
13175	RGS3	1
13176	RGS4	1
13177	RGS5	1
13178	RGS6	5.380602e-02
13179	RGS7	1
13180	RGS7BP	1
13181	RGS8	1
13182	RGS9	1
13183	RGS9BP	1
13184	RHAG	1
13185	RHBDD1	1
13186	RHBDD2	1
13187	RHBDD3	1.437449e-02
13188	RHBDF1	1
13189	RHBDF2	1
13190	RHBDL1	1
13191	RHBDL2	1
13192	RHBDL3	1
13193	RHBG	1
13194	RHCE	1
13195	RHCG	1
13196	RHD	1
13197	RHEB	1
13198	RHEBL1	1
13199	RHO	1
13200	RHOA	1
13201	RHOB	1
13202	RHOBTB1	1
13203	RHOBTB2	1
13204	RHOBTB3	1
13205	RHOC	1
13206	RHOD	1
13207	RHOF	1
13208	RHOG	1
Done

Running MutSig 2:
Scatter job 146: processing genes 13118 - 13208
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RGPD3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.892412e-02	ci left: 1.554168e-01	ci right 1.699803e-01	k: 1626	n:10000
Cons ci ratio: 1.791163e-02	ci left: 8.197466e-01	ci right 8.346623e-01	k: 8273	n:10000
KS ci ratio: 1.983124e-01	ci left: 3.386163e-02	ci right 4.141078e-02	k: 375	n:10000
RGPD3   10000 perm   3 sec   (3841 perm/sec)   p_kst 3.750000e-02   p_cons 8.273000e-01   p_joint 1.626000e-01

Joint ci ratio: 8.464332e-02	ci left: 9.273591e-02	ci right 1.009817e-01	k: 1936	n:20000
Cons ci ratio: 1.260729e-02	ci left: 8.233044e-01	ci right 8.337998e-01	k: 16572	n:20000
KS ci ratio: 1.378673e-01	ci left: 3.616580e-02	ci right 4.156932e-02	k: 776	n:20000
RGPD3   20000 perm   9 sec   (2288 perm/sec)   p_kst 3.880000e-02   p_cons 8.286000e-01   p_joint 9.680000e-02

Joint ci ratio: 6.304148e-02	ci left: 1.105560e-01	ci right 1.177856e-01	k: 3424	n:30000
Cons ci ratio: 1.037811e-02	ci left: 8.219311e-01	ci right 8.305389e-01	k: 24788	n:30000
KS ci ratio: 1.121940e-01	ci left: 3.690225e-02	ci right 4.132091e-02	k: 1172	n:30000
RGPD3   30000 perm   12 sec   (2543 perm/sec)   p_kst 3.906667e-02   p_cons 8.262667e-01   p_joint 1.141333e-01

Joint ci ratio: 5.112842e-02	ci left: 1.248395e-01	ci right 1.314146e-01	k: 5124	n:40000
Cons ci ratio: 8.975644e-03	ci left: 8.229041e-01	ci right 8.303484e-01	k: 33066	n:40000
KS ci ratio: 9.671361e-02	ci left: 3.753892e-02	ci right 4.137831e-02	k: 1577	n:40000
RGPD3   40000 perm   15 sec   (2697 perm/sec)   p_kst 3.942500e-02   p_cons 8.266500e-01   p_joint 1.281000e-01

Outputting figure to mutsig2_images.part000000000146/RGPD3.3_5369_40000_0.039425_0.82665_0.1281.png
                gene_name: RGPD3
               theta_stop: 0.097 
                    nperm: 40000 
                     p_ks: 0.039 
        ci_ks_bounds_left: 0.038 
       ci_ks_bounds_right: 0.041 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.83 
                  p_joint: 0.13 
     ci_joint_bounds_left: 0.12 
    ci_joint_bounds_right: 0.13 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000146
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 146 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1544>
Subject: Job 8704326: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1544>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000147> was used as the working directory.
Started at Thu Nov 15 19:36:17 2012
Results reported at Thu Nov 15 19:39:40 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000147.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000147.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 147  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000147.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    273.48 sec.
    Max Memory :      5734 MB
    Max Swap   :      8527 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
147
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 147
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 147: processing genes 13209 - 13298
Calculating significance of each gene.
Using projection method.
13209	RHOH	1
13210	RHOJ	1
13211	RHOQ	6.371168e-02
13212	RHOT1	1
13213	RHOT2	1
13214	RHOU	1
13215	RHOV	1
13216	RHOXF1	1
13217	RHOXF2	1
13218	RHOXF2B	1
13219	RHPN1	1
13220	RHPN2	1.864178e-01
13221	RIBC1	1
13222	RIBC2	1
13223	RIC3	8.160164e-02
13224	RIC8A	1
13225	RIC8B	1
13226	RICH2	1
13227	RICTOR	1
13228	RIF1	1
13229	RILP	1
13230	RILPL1	1
13231	RILPL2	1
13232	RIMBP2	1
13233	RIMKLA	1
13234	RIMKLB	1
13235	RIMS1	3.953802e-01
13236	RIMS2	4.090955e-02
13237	RIMS3	1.080790e-01
13238	RIMS4	1
13239	RIN1	1
13240	RIN2	1
13241	RIN3	1
13242	RING1	1
13243	RINL	1
13244	RINT1	3.684298e-02
13245	RIOK1	9.733616e-03
13246	RIOK2	1.025584e-01
13247	RIOK3	1
13248	RIPK1	1
13249	RIPK2	1
13250	RIPK3	1
13251	RIPK4	3.532642e-01
13252	RIPPLY1	1
13253	RIPPLY2	1
13254	RIT1	1
13255	RIT2	9.138321e-02
13256	RLBP1	1
13257	RLF	1
13258	RLIM	1
13259	RLN1	1
13260	RLN2	1
13261	RLN3	1
13262	RLTPR	1
13263	RMI1	1
13264	RMND1	9.972769e-02
13265	RMND5A	1
13266	RMND5B	4.102698e-02
13267	RNASE1	1
13268	RNASE10	1
13269	RNASE11	1
13270	RNASE12	1
13271	RNASE13	1
13272	RNASE2	1
13273	RNASE3	1
13274	RNASE4	1
13275	RNASE6	1
13276	RNASE7	1
13277	RNASE8	1
13278	RNASE9	1
13279	RNASEH1	1
13280	RNASEH2A	1
13281	RNASEH2B	1
13282	RNASEH2C	1
13283	RNASEK	1
13284	RNASEL	1
13285	RNASEN	1
13286	RNASET2	1
13287	RND1	1
13288	RND2	1
13289	RND3	1
13290	RNF10	1
13291	RNF103	1
13292	RNF11	1
13293	RNF111	1
13294	RNF112	1
13295	RNF113A	1
13296	RNF113B	1
13297	RNF114	1
13298	RNF115	1
Done

Running MutSig 2:
Scatter job 147: processing genes 13209 - 13298
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RIMS2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.920191e-02	ci left: 7.986185e-01	ci right 8.142026e-01	k: 8065	n:10000
Cons ci ratio: 5.326853e-02	ci left: 3.418387e-01	ci right 3.606481e-01	k: 3512	n:10000
KS ci ratio: 2.142107e-01	ci left: 2.892165e-02	ci right 3.595419e-02	k: 323	n:10000
RIMS2   10000 perm   2 sec   (4327 perm/sec)   p_kst 3.230000e-02   p_cons 3.512000e-01   p_joint 8.065000e-01

Joint ci ratio: 9.579764e-02	ci left: 7.353756e-02	ci right 8.098590e-02	k: 1544	n:20000
Cons ci ratio: 3.790734e-02	ci left: 3.417443e-01	ci right 3.549998e-01	k: 6967	n:20000
KS ci ratio: 1.574756e-01	ci left: 2.767935e-02	ci right 3.245857e-02	k: 600	n:20000
RIMS2   20000 perm   9 sec   (2174 perm/sec)   p_kst 3.000000e-02   p_cons 3.483500e-01   p_joint 7.720000e-02

Joint ci ratio: 7.830140e-02	ci left: 7.407315e-02	ci right 8.014238e-02	k: 2312	n:30000
Cons ci ratio: 3.078153e-02	ci left: 3.454643e-01	ci right 3.562980e-01	k: 10526	n:30000
KS ci ratio: 1.308797e-01	ci left: 2.713018e-02	ci right 3.096175e-02	k: 870	n:30000
RIMS2   30000 perm   12 sec   (2509 perm/sec)   p_kst 2.900000e-02   p_cons 3.508667e-01   p_joint 7.706667e-02

Joint ci ratio: 6.732751e-02	ci left: 7.548862e-02	ci right 8.077282e-02	k: 3124	n:40000
Cons ci ratio: 2.664295e-02	ci left: 3.464458e-01	ci right 3.558258e-01	k: 14045	n:40000
KS ci ratio: 1.125168e-01	ci left: 2.779061e-02	ci right 3.112816e-02	k: 1177	n:40000
RIMS2   40000 perm   15 sec   (2728 perm/sec)   p_kst 2.942500e-02   p_cons 3.511250e-01   p_joint 7.810000e-02

Joint ci ratio: 6.024687e-02	ci left: 7.570341e-02	ci right 8.042572e-02	k: 3902	n:50000
Cons ci ratio: 2.380353e-02	ci left: 3.474535e-01	ci right 3.558438e-01	k: 17582	n:50000
KS ci ratio: 1.009744e-01	ci left: 2.778063e-02	ci right 3.075436e-02	k: 1462	n:50000
RIMS2   50000 perm   17 sec   (2864 perm/sec)   p_kst 2.924000e-02   p_cons 3.516400e-01   p_joint 7.804000e-02

Joint ci ratio: 5.524500e-02	ci left: 7.527394e-02	ci right 7.956704e-02	k: 4644	n:60000
Cons ci ratio: 2.173797e-02	ci left: 3.476454e-01	ci right 3.553023e-01	k: 21088	n:60000
KS ci ratio: 9.312636e-02	ci left: 2.734597e-02	ci right 3.003321e-02	k: 1720	n:60000
RIMS2   60000 perm   20 sec   (2941 perm/sec)   p_kst 2.866667e-02   p_cons 3.514667e-01   p_joint 7.740000e-02

Outputting figure to mutsig2_images.part000000000147/RIMS2.2_4342_60000_0.028667_0.35147_0.0774.png
                gene_name: RIMS2
               theta_stop: 0.093 
                    nperm: 60000 
                     p_ks: 0.029 
        ci_ks_bounds_left: 0.027 
       ci_ks_bounds_right: 0.030 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.077 
     ci_joint_bounds_left: 0.075 
    ci_joint_bounds_right: 0.080 

Current progress: 33 percent done.
RINT1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.304679e-02	ci left: 5.747677e-01	ci right 5.941831e-01	k: 5845	n:10000
Cons ci ratio: 4.090057e-02	ci left: 4.688665e-01	ci right 4.885459e-01	k: 4787	n:10000
KS ci ratio: 2.777680e-02	ci left: 6.563567e-01	ci right 6.749467e-01	k: 6657	n:10000
RINT1   10000 perm   2 sec   (5746 perm/sec)   p_kst 6.657000e-01   p_cons 4.787000e-01   p_joint 5.845000e-01

Outputting figure to mutsig2_images.part000000000147/RINT1.2_2439_10000_0.6657_0.4787_0.5845.png
                gene_name: RINT1
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.67 
        ci_ks_bounds_left: 0.66 
       ci_ks_bounds_right: 0.67 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.49 
                  p_joint: 0.58 
     ci_joint_bounds_left: 0.57 
    ci_joint_bounds_right: 0.59 

Current progress: 67 percent done.
RIOK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.233008e-02	ci left: 7.464469e-01	ci right 7.634043e-01	k: 7550	n:10000
KS ci ratio: 2.500293e-02	ci left: 7.018032e-01	ci right 7.196739e-01	k: 7108	n:10000
RIOK1   10000 perm   2 sec   (6060 perm/sec)   p_kst 7.108000e-01   p_cons 7.550000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000147/RIOK1.2_1775_10000_0.7108_0.755_1.png
                gene_name: RIOK1
               theta_stop: 0.025 
                    nperm: 10000 
                     p_ks: 0.71 
        ci_ks_bounds_left: 0.70 
       ci_ks_bounds_right: 0.72 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.75 
     ci_cons_bounds_right: 0.76 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000147
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 147 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1641>
Subject: Job 8704328: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1641>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000148> was used as the working directory.
Started at Thu Nov 15 19:36:17 2012
Results reported at Thu Nov 15 19:38:51 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000148.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000148.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 148  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000148.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    151.45 sec.
    Max Memory :      5502 MB
    Max Swap   :      8278 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
148
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 148
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 148: processing genes 13299 - 13389
Calculating significance of each gene.
Using projection method.
13299	RNF121	1
13300	RNF122	1
13301	RNF123	1
13302	RNF125	1
13303	RNF126	1
13304	RNF128	8.289781e-02
13305	RNF13	1
13306	RNF130	1
13307	RNF133	1
13308	RNF135	1
13309	RNF138	1
13310	RNF139	2.011859e-01
13311	RNF14	1
13312	RNF141	1
13313	RNF144A	1
13314	RNF144B	1
13315	RNF145	1
13316	RNF146	9.520914e-02
13317	RNF148	1
13318	RNF149	1
13319	RNF150	1
13320	RNF151	1
13321	RNF152	1
13322	RNF157	1.182804e-01
13323	RNF160	1
13324	RNF165	1
13325	RNF166	1
13326	RNF167	1
13327	RNF168	1
13328	RNF169	1
13329	RNF17	1
13330	RNF170	3.829119e-02
13331	RNF175	1
13332	RNF180	1
13333	RNF181	1
13334	RNF182	1
13335	RNF183	1
13336	RNF185	1
13337	RNF186	1
13338	RNF19A	1
13339	RNF19B	6.525152e-02
13340	RNF2	1.509653e-01
13341	RNF20	1
13342	RNF207	1
13343	RNF208	1
13344	RNF212	1
13345	RNF213	1
13346	RNF214	2.438811e-01
13347	RNF215	5.242086e-02
13348	RNF216	3.583017e-01
13349	RNF217	1
13350	RNF219	1
13351	RNF220	1
13352	RNF24	1
13353	RNF25	1
13354	RNF26	1
13355	RNF31	1
13356	RNF32	1
13357	RNF34	1
13358	RNF38	1
13359	RNF39	8.185468e-02
13360	RNF4	1
13361	RNF40	1
13362	RNF41	1
13363	RNF43	1
13364	RNF44	1
13365	RNF5	1
13366	RNF6	1
13367	RNF7	3.299003e-02
13368	RNF8	1
13369	RNFT1	1
13370	RNFT2	1
13371	RNGTT	1
13372	RNH1	1
13373	RNLS	1
13374	RNMT	1
13375	RNMTL1	1
13376	RNPC3	1
13377	RNPEP	1
13378	RNPEPL1	5.364204e-02
13379	RNPS1	1
13380	ROBLD3	1
13381	ROBO1	1
In gene ROBO2 the following bins exceed PROBCAP:
    THCA-EM-A2CQ-TP	categ 6	N = 4241    n = 1	mu =   3.34e-08
13382	ROBO2	5.152810e-02
13383	ROBO3	1
13384	ROBO4	1
13385	ROCK1	1
13386	ROCK2	1
13387	ROD1	1
13388	ROGDI	1
13389	ROM1	1
Done

Running MutSig 2:
Scatter job 148: processing genes 13299 - 13389
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ROBO2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.953784e-02	ci left: 6.282906e-01	ci right 6.472290e-01	k: 6378	n:10000
Cons ci ratio: 1.236641e-01	ci left: 8.562704e-02	ci right 9.701233e-02	k: 912	n:10000
KS ci ratio: 9.977908e-02	ci left: 1.269892e-01	ci right 1.404250e-01	k: 1336	n:10000
ROBO2   10000 perm   3 sec   (3813 perm/sec)   p_kst 1.336000e-01   p_cons 9.120000e-02   p_joint 6.378000e-01

Joint ci ratio: 5.569768e-02	ci left: 1.929417e-01	ci right 2.040461e-01	k: 3969	n:20000
Cons ci ratio: 8.878972e-02	ci left: 8.484372e-02	ci right 9.277630e-02	k: 1775	n:20000
KS ci ratio: 6.974495e-02	ci left: 1.316222e-01	ci right 1.411837e-01	k: 2727	n:20000
ROBO2   20000 perm   9 sec   (2270 perm/sec)   p_kst 1.363500e-01   p_cons 8.875000e-02   p_joint 1.984500e-01

Outputting figure to mutsig2_images.part000000000148/ROBO2.2_4243_20000_0.13635_0.08875_0.19845.png
                gene_name: ROBO2
               theta_stop: 0.089 
                    nperm: 20000 
                     p_ks: 0.14 
        ci_ks_bounds_left: 0.13 
       ci_ks_bounds_right: 0.14 
                   p_cons: 0.089 
      ci_cons_bounds_left: 0.085 
     ci_cons_bounds_right: 0.093 
                  p_joint: 0.20 
     ci_joint_bounds_left: 0.19 
    ci_joint_bounds_right: 0.20 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000148
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 148 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1640>
Subject: Job 8704330: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1640>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000149> was used as the working directory.
Started at Thu Nov 15 19:36:17 2012
Results reported at Thu Nov 15 19:38:29 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000149.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000149.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 149  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000149.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    154.34 sec.
    Max Memory :      5719 MB
    Max Swap   :      8517 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
149
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 149
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 149: processing genes 13390 - 13479
Calculating significance of each gene.
Using projection method.
13390	ROMO1	1
13391	ROPN1	1
13392	ROPN1B	2.429502e-02
13393	ROPN1L	1
13394	ROR1	1
13395	ROR2	1
13396	RORA	1
13397	RORB	3.887360e-02
13398	RORC	1
13399	ROS1	2.555628e-01
In gene RP1 the following bins exceed PROBCAP:
    THCA-ET-A2N4-TP	categ 5	N = 6483    n = 1	mu =   2.14e-07
13400	RP1	5.277466e-01
13401	RP1L1	1
13402	RP2	1
13403	RP9	3.877056e-02
13404	RPA1	1
13405	RPA2	1
13406	RPA3	1
13407	RPA4	1
13408	RPAIN	1
13409	RPAP1	2.088899e-01
13410	RPAP2	7.982449e-02
13411	RPAP3	1
13412	RPE	1
13413	RPE65	1
13414	RPF1	1
13415	RPF2	1
13416	RPGR	1
13417	RPGRIP1	1
13418	RPGRIP1L	1
13419	RPH3A	1
13420	RPH3AL	1
13421	RPIA	1
13422	RPL10	1
13423	RPL10A	3.656251e-02
13424	RPL10L	1
13425	RPL11	1
13426	RPL12	1.802598e-02
13427	RPL13	1
13428	RPL13A	1
13429	RPL14	1
13430	RPL15	1
13431	RPL17	1
13432	RPL18	1
13433	RPL18A	1
13434	RPL19	1
13435	RPL21	1
13436	RPL22	1
13437	RPL22L1	2.418086e-02
13438	RPL23	1
13439	RPL23A	1
13440	RPL24	1
13441	RPL26	1
13442	RPL26L1	1
13443	RPL27	1
13444	RPL27A	1
13445	RPL28	1
13446	RPL29	1
13447	RPL3	1
13448	RPL30	1
13449	RPL31	1
13450	RPL32	1
13451	RPL34	1
13452	RPL35	1
13453	RPL35A	1
13454	RPL36	1
13455	RPL36A	1
13456	RPL36AL	1
13457	RPL37	1
13458	RPL37A	1
13459	RPL38	1
13460	RPL39	1
13461	RPL39L	1
13462	RPL3L	1
13463	RPL4	7.662187e-02
13464	RPL41	1
13465	RPL5	1
13466	RPL6	1
13467	RPL7	1
13468	RPL7A	1
13469	RPL7L1	1
13470	RPL8	1
13471	RPL9	9.183765e-02
13472	RPLP0	1
13473	RPLP1	1
13474	RPLP2	1
13475	RPN1	1
13476	RPN2	1
13477	RPP14	1
13478	RPP21	1
13479	RPP25	1
Done

Running MutSig 2:
Scatter job 149: processing genes 13390 - 13479
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ROS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.110452e-01	ci left: 1.046144e-01	ci right 1.170133e-01	k: 1107	n:10000
Cons ci ratio: 6.363186e-02	ci left: 2.662650e-01	ci right 2.838662e-01	k: 2750	n:10000
KS ci ratio: 1.668597e-01	ci left: 4.792139e-02	ci right 5.674170e-02	k: 522	n:10000
ROS1   10000 perm   2 sec   (4417 perm/sec)   p_kst 5.220000e-02   p_cons 2.750000e-01   p_joint 1.107000e-01

Joint ci ratio: 6.208404e-02	ci left: 1.610153e-01	ci right 1.713820e-01	k: 3323	n:20000
Cons ci ratio: 4.311436e-02	ci left: 2.861015e-01	ci right 2.987588e-01	k: 5848	n:20000
KS ci ratio: 1.198764e-01	ci left: 4.770004e-02	ci right 5.383140e-02	k: 1014	n:20000
ROS1   20000 perm   8 sec   (2559 perm/sec)   p_kst 5.070000e-02   p_cons 2.924000e-01   p_joint 1.661500e-01

Joint ci ratio: 6.139399e-02	ci left: 1.159484e-01	ci right 1.233255e-01	k: 3588	n:30000
Cons ci ratio: 3.497868e-02	ci left: 2.899092e-01	ci right 3.002639e-01	k: 8852	n:30000
KS ci ratio: 9.779484e-02	ci left: 4.834209e-02	ci right 5.334535e-02	k: 1524	n:30000
ROS1   30000 perm   11 sec   (2824 perm/sec)   p_kst 5.080000e-02   p_cons 2.950667e-01   p_joint 1.196000e-01

Outputting figure to mutsig2_images.part000000000149/ROS1.2_7216_30000_0.0508_0.29507_0.1196.png
                gene_name: ROS1
               theta_stop: 0.098 
                    nperm: 30000 
                     p_ks: 0.051 
        ci_ks_bounds_left: 0.048 
       ci_ks_bounds_right: 0.053 
                   p_cons: 0.30 
      ci_cons_bounds_left: 0.29 
     ci_cons_bounds_right: 0.30 
                  p_joint: 0.12 
     ci_joint_bounds_left: 0.12 
    ci_joint_bounds_right: 0.12 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000149
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 149 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1543>
Subject: Job 8704333: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1543>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000150> was used as the working directory.
Started at Thu Nov 15 19:36:17 2012
Results reported at Thu Nov 15 20:43:36 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000150.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000150.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 150  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000150.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   4386.18 sec.
    Max Memory :      6026 MB
    Max Swap   :      8802 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
150
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 150
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 150: processing genes 13480 - 13570
Calculating significance of each gene.
Using projection method.
13480	RPP30	1
13481	RPP38	1
13482	RPP40	1
13483	RPRD1A	3.997093e-04
13484	RPRD1B	1
13485	RPRD2	1
13486	RPRM	1
13487	RPRML	1
13488	RPS10	1
13489	RPS11	1
13490	RPS12	1
13491	RPS13	1
13492	RPS14	1
13493	RPS15	1
13494	RPS15A	1
13495	RPS16	1
13496	RPS18	1
13497	RPS19	1
13498	RPS19BP1	1
13499	RPS2	1
13500	RPS20	1
13501	RPS21	1
13502	RPS23	1
13503	RPS24	1
13504	RPS25	1
13505	RPS26	1
13506	RPS27	1
13507	RPS27A	1
13508	RPS27L	1
13509	RPS28	1
13510	RPS29	1
13511	RPS3	1
13512	RPS3A	1
13513	RPS4X	1
13514	RPS4Y1	1
13515	RPS4Y2	1
13516	RPS5	1
13517	RPS6	1
In gene RPS6KA1 the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 2235    n = 1	mu =   2.06e-07
13518	RPS6KA1	2.399199e-01
13519	RPS6KA2	1
13520	RPS6KA3	1
13521	RPS6KA4	1
13522	RPS6KA5	1
13523	RPS6KA6	1
13524	RPS6KB1	1
13525	RPS6KB2	6.957054e-02
13526	RPS6KC1	1
13527	RPS6KL1	1
13528	RPS7	1
13529	RPS8	1
13530	RPS9	1
13531	RPSA	1
13532	RPTN	2.660725e-09
13533	RPTOR	1
13534	RPUSD1	7.140683e-03
13535	RPUSD2	1
13536	RPUSD3	1
13537	RPUSD4	1
13538	RQCD1	1
13539	RRAD	1
13540	RRAGA	1
13541	RRAGB	1
13542	RRAGC	1
13543	RRAGD	1
13544	RRAS	1
13545	RRAS2	1
13546	RRBP1	2.171789e-01
13547	RREB1	1
13548	RRH	1
13549	RRM1	1
13550	RRM2	1
13551	RRM2B	1
13552	RRN3	1
13553	RRP1	1
13554	RRP12	2.091607e-01
13555	RRP15	1
13556	RRP1B	1
13557	RRP7A	1
13558	RRP8	8.269682e-02
13559	RRP9	3.716860e-02
13560	RRS1	1
13561	RS1	1
13562	RSAD1	1
13563	RSAD2	1
13564	RSBN1	1
13565	RSBN1L	2.337626e-01
13566	RSC1A1	1
13567	RSF1	1
13568	RSL1D1	2.165983e-01
13569	RSL24D1	1
13570	RSPH1	1
Done

Running MutSig 2:
Scatter job 150: processing genes 13480 - 13570
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RPTN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 1.019464e-01	ci left: 1.221955e-01	ci right 1.354215e-01	k: 1287	n:10000
KS ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
RPTN   10000 perm   2 sec   (4940 perm/sec)   p_kst 5.000000e-04   p_cons 1.287000e-01   p_joint 0

Joint ci ratio: 3.199326e-01	ci left: 6.259271e-03	ci right 8.687225e-03	k: 148	n:20000
Cons ci ratio: 6.989336e-02	ci left: 1.311297e-01	ci right 1.406765e-01	k: 2717	n:20000
KS ci ratio: 1.011735e+00	ci left: 3.827477e-04	ci right 1.174202e-03	k: 14	n:20000
RPTN   20000 perm   7 sec   (2736 perm/sec)   p_kst 7.000000e-04   p_cons 1.358500e-01   p_joint 7.400000e-03

Joint ci ratio: 3.782780e-01	ci left: 2.893683e-03	ci right 4.271882e-03	k: 106	n:30000
Cons ci ratio: 5.812001e-02	ci left: 1.278267e-01	ci right 1.355115e-01	k: 3949	n:30000
KS ci ratio: 8.762318e-01	ci left: 3.813497e-04	ci right 9.888526e-04	k: 19	n:30000
RPTN   30000 perm   10 sec   (3105 perm/sec)   p_kst 6.333333e-04   p_cons 1.316333e-01   p_joint 3.533333e-03

Joint ci ratio: 4.222446e-01	ci left: 1.697716e-03	ci right 2.626935e-03	k: 85	n:40000
Cons ci ratio: 5.032622e-02	ci left: 1.283756e-01	ci right 1.350279e-01	k: 5267	n:40000
KS ci ratio: 7.405418e-01	ci left: 4.448749e-04	ci right 9.819388e-04	k: 27	n:40000
RPTN   40000 perm   12 sec   (3313 perm/sec)   p_kst 6.750000e-04   p_cons 1.316750e-01   p_joint 2.125000e-03

Joint ci ratio: 4.017973e-01	ci left: 1.519490e-03	ci right 2.300160e-03	k: 94	n:50000
Cons ci ratio: 4.661644e-02	ci left: 1.210042e-01	ci right 1.267995e-01	k: 6194	n:50000
KS ci ratio: 6.623624e-01	ci left: 4.709643e-04	ci right 9.501034e-04	k: 34	n:50000
RPTN   50000 perm   15 sec   (3405 perm/sec)   p_kst 6.800000e-04   p_cons 1.238800e-01   p_joint 1.880000e-03

Joint ci ratio: 4.199598e-01	ci left: 1.146637e-03	ci right 1.769857e-03	k: 86	n:60000
Cons ci ratio: 4.265642e-02	ci left: 1.207452e-01	ci right 1.260246e-01	k: 7402	n:60000
KS ci ratio: 6.195946e-01	ci left: 4.622531e-04	ci right 8.884654e-04	k: 39	n:60000
RPTN   60000 perm   17 sec   (3467 perm/sec)   p_kst 6.500000e-04   p_cons 1.233667e-01   p_joint 1.433333e-03

Joint ci ratio: 4.436021e-01	ci left: 8.681973e-04	ci right 1.374622e-03	k: 77	n:70000
Cons ci ratio: 3.955449e-02	ci left: 1.206038e-01	ci right 1.254846e-01	k: 8612	n:70000
KS ci ratio: 5.777784e-01	ci left: 4.689419e-04	ci right 8.601000e-04	k: 45	n:70000
RPTN   70000 perm   20 sec   (3504 perm/sec)   p_kst 6.428571e-04   p_cons 1.230286e-01   p_joint 1.100000e-03

Joint ci ratio: 4.224746e-01	ci left: 8.487727e-04	ci right 1.313633e-03	k: 85	n:80000
Cons ci ratio: 3.697722e-02	ci left: 1.208927e-01	ci right 1.254596e-01	k: 9853	n:80000
KS ci ratio: 5.382717e-01	ci left: 4.854880e-04	ci right 8.523023e-04	k: 52	n:80000
RPTN   80000 perm   23 sec   (3511 perm/sec)   p_kst 6.500000e-04   p_cons 1.231625e-01   p_joint 1.062500e-03

Joint ci ratio: 4.617890e-01	ci left: 6.161786e-04	ci right 9.949734e-04	k: 71	n:90000
Cons ci ratio: 3.495920e-02	ci left: 1.204308e-01	ci right 1.247269e-01	k: 11031	n:90000
KS ci ratio: 4.787233e-01	ci left: 5.672039e-04	ci right 9.328867e-04	k: 66	n:90000
RPTN   90000 perm   26 sec   (3511 perm/sec)   p_kst 7.333333e-04   p_cons 1.225667e-01   p_joint 7.888889e-04

Joint ci ratio: 4.555198e-01	ci left: 5.722458e-04	ci right 9.177792e-04	k: 73	n:100000
Cons ci ratio: 3.315255e-02	ci left: 1.206228e-01	ci right 1.246991e-01	k: 12265	n:100000
KS ci ratio: 4.555198e-01	ci left: 5.722458e-04	ci right 9.177792e-04	k: 73	n:100000
RPTN   100000 perm   29 sec   (3502 perm/sec)   p_kst 7.300000e-04   p_cons 1.226500e-01   p_joint 7.300000e-04

Joint ci ratio: 4.327282e-01	ci left: 5.848207e-04	ci right 9.151509e-04	k: 81	n:110000
Cons ci ratio: 3.159585e-02	ci left: 1.208117e-01	ci right 1.246991e-01	k: 13502	n:110000
KS ci ratio: 4.153492e-01	ci left: 6.416713e-04	ci right 9.855309e-04	k: 88	n:110000
RPTN   110000 perm   32 sec   (3454 perm/sec)   p_kst 8.000000e-04   p_cons 1.227455e-01   p_joint 7.363636e-04

Joint ci ratio: 4.177184e-01	ci left: 5.807348e-04	ci right 8.942091e-04	k: 87	n:120000
Cons ci ratio: 3.025254e-02	ci left: 1.208818e-01	ci right 1.246032e-01	k: 14728	n:120000
KS ci ratio: 4.020226e-01	ci left: 6.330580e-04	ci right 9.585176e-04	k: 94	n:120000
RPTN   120000 perm   35 sec   (3436 perm/sec)   p_kst 7.833333e-04   p_cons 1.227333e-01   p_joint 7.250000e-04

Joint ci ratio: 4.063381e-01	ci left: 5.705368e-04	ci right 8.678523e-04	k: 92	n:130000
Cons ci ratio: 2.910150e-02	ci left: 1.206918e-01	ci right 1.242636e-01	k: 15921	n:130000
KS ci ratio: 3.918477e-01	ci left: 6.189826e-04	ci right 9.270690e-04	k: 99	n:130000
RPTN   130000 perm   38 sec   (3416 perm/sec)   p_kst 7.615385e-04   p_cons 1.224692e-01   p_joint 7.076923e-04

Joint ci ratio: 3.861056e-01	ci left: 5.941008e-04	ci right 8.843671e-04	k: 102	n:140000
Cons ci ratio: 2.799434e-02	ci left: 1.211276e-01	ci right 1.245737e-01	k: 17198	n:140000
KS ci ratio: 3.669908e-01	ci left: 6.652448e-04	ci right 9.703291e-04	k: 113	n:140000
RPTN   140000 perm   41 sec   (3387 perm/sec)   p_kst 8.071429e-04   p_cons 1.228429e-01   p_joint 7.285714e-04

Joint ci ratio: 4.020548e-01	ci left: 5.064392e-04	ci right 7.668275e-04	k: 94	n:150000
Cons ci ratio: 2.702881e-02	ci left: 1.213154e-01	ci right 1.246459e-01	k: 18446	n:150000
KS ci ratio: 3.607221e-01	ci left: 6.451226e-04	ci right 9.347372e-04	k: 117	n:150000
RPTN   150000 perm   45 sec   (3355 perm/sec)   p_kst 7.800000e-04   p_cons 1.229733e-01   p_joint 6.266667e-04

Joint ci ratio: 3.880129e-01	ci left: 5.141920e-04	ci right 7.669739e-04	k: 101	n:160000
Cons ci ratio: 2.616811e-02	ci left: 1.213882e-01	ci right 1.246130e-01	k: 19679	n:160000
KS ci ratio: 3.449965e-01	ci left: 6.674630e-04	ci right 9.511307e-04	k: 128	n:160000
RPTN   160000 perm   48 sec   (3323 perm/sec)   p_kst 8.000000e-04   p_cons 1.229937e-01   p_joint 6.312500e-04

Joint ci ratio: 3.702821e-01	ci left: 5.371668e-04	ci right 7.862572e-04	k: 111	n:170000
Cons ci ratio: 2.536813e-02	ci left: 1.215943e-01	ci right 1.247244e-01	k: 20936	n:170000
KS ci ratio: 3.299857e-01	ci left: 6.928113e-04	ci right 9.717249e-04	k: 140	n:170000
RPTN   170000 perm   52 sec   (3291 perm/sec)   p_kst 8.235294e-04   p_cons 1.231529e-01   p_joint 6.529412e-04

Joint ci ratio: 3.607459e-01	ci left: 5.375964e-04	ci right 7.789577e-04	k: 117	n:180000
Cons ci ratio: 2.464426e-02	ci left: 1.217181e-01	ci right 1.247607e-01	k: 22182	n:180000
KS ci ratio: 3.220886e-01	ci left: 6.900282e-04	ci right 9.598011e-04	k: 147	n:180000
RPTN   180000 perm   55 sec   (3258 perm/sec)   p_kst 8.166667e-04   p_cons 1.232333e-01   p_joint 6.500000e-04

Joint ci ratio: 3.562492e-01	ci left: 5.236686e-04	ci right 7.551669e-04	k: 120	n:190000
Cons ci ratio: 2.397376e-02	ci left: 1.218771e-01	ci right 1.248396e-01	k: 23437	n:190000
KS ci ratio: 3.127200e-01	ci left: 6.973072e-04	ci right 9.604135e-04	k: 156	n:190000
RPTN   190000 perm   59 sec   (3225 perm/sec)   p_kst 8.210526e-04   p_cons 1.233526e-01   p_joint 6.315789e-04

Joint ci ratio: 3.979182e-01	ci left: 3.888183e-04	ci right 5.861310e-04	k: 96	n:200000
Cons ci ratio: 2.336542e-02	ci left: 1.219267e-01	ci right 1.248142e-01	k: 24673	n:200000
KS ci ratio: 3.050449e-01	ci left: 6.993423e-04	ci right 9.554830e-04	k: 164	n:200000
RPTN   200000 perm   63 sec   (3187 perm/sec)   p_kst 8.200000e-04   p_cons 1.233650e-01   p_joint 4.800000e-04

Joint ci ratio: 4.063941e-01	ci left: 3.531808e-04	ci right 5.372583e-04	k: 92	n:210000
Cons ci ratio: 2.278412e-02	ci left: 1.221336e-01	ci right 1.249530e-01	k: 25943	n:210000
KS ci ratio: 3.005278e-01	ci left: 6.880406e-04	ci right 9.355977e-04	k: 169	n:210000
RPTN   210000 perm   67 sec   (3149 perm/sec)   p_kst 8.047619e-04   p_cons 1.235381e-01   p_joint 4.380952e-04

Joint ci ratio: 4.201841e-01	ci left: 3.126883e-04	ci right 4.827474e-04	k: 86	n:220000
Cons ci ratio: 2.225067e-02	ci left: 1.222591e-01	ci right 1.250145e-01	k: 27199	n:220000
KS ci ratio: 2.953622e-01	ci left: 6.820002e-04	ci right 9.223763e-04	k: 175	n:220000
RPTN   220000 perm   71 sec   (3103 perm/sec)   p_kst 7.954545e-04   p_cons 1.236318e-01   p_joint 3.909091e-04

Joint ci ratio: 4.020996e-01	ci left: 3.302799e-04	ci right 5.001171e-04	k: 94	n:230000
Cons ci ratio: 2.174038e-02	ci left: 1.224998e-01	ci right 1.251966e-01	k: 28484	n:230000
KS ci ratio: 2.880876e-01	ci left: 6.886160e-04	ci right 9.242580e-04	k: 184	n:230000
RPTN   230000 perm   75 sec   (3071 perm/sec)   p_kst 8.000000e-04   p_cons 1.238435e-01   p_joint 4.086957e-04

Joint ci ratio: 3.919175e-01	ci left: 3.352719e-04	ci right 5.021814e-04	k: 99	n:240000
Cons ci ratio: 2.128773e-02	ci left: 1.224765e-01	ci right 1.251159e-01	k: 29710	n:240000
KS ci ratio: 2.806024e-01	ci left: 6.986202e-04	ci right 9.303761e-04	k: 194	n:240000
RPTN   240000 perm   79 sec   (3036 perm/sec)   p_kst 8.083333e-04   p_cons 1.237917e-01   p_joint 4.125000e-04

Joint ci ratio: 3.919208e-01	ci left: 3.218605e-04	ci right 4.820950e-04	k: 99	n:250000
Cons ci ratio: 2.084532e-02	ci left: 1.226308e-01	ci right 1.252179e-01	k: 30980	n:250000
KS ci ratio: 2.777703e-01	ci left: 6.855547e-04	ci right 9.102794e-04	k: 198	n:250000
RPTN   250000 perm   83 sec   (3000 perm/sec)   p_kst 7.920000e-04   p_cons 1.239200e-01   p_joint 3.960000e-04

Joint ci ratio: 3.899781e-01	ci left: 3.129490e-04	ci right 4.677759e-04	k: 100	n:260000
Cons ci ratio: 2.044604e-02	ci left: 1.225976e-01	ci right 1.251339e-01	k: 32204	n:260000
KS ci ratio: 2.716938e-01	ci left: 6.914187e-04	ci right 9.122621e-04	k: 207	n:260000
RPTN   260000 perm   88 sec   (2962 perm/sec)   p_kst 7.961538e-04   p_cons 1.238615e-01   p_joint 3.846154e-04

Joint ci ratio: 3.861747e-01	ci left: 3.080428e-04	ci right 4.585779e-04	k: 102	n:270000
Cons ci ratio: 2.006578e-02	ci left: 1.226005e-01	ci right 1.250891e-01	k: 33437	n:270000
KS ci ratio: 2.653882e-01	ci left: 7.003550e-04	ci right 9.179983e-04	k: 217	n:270000
RPTN   270000 perm   92 sec   (2927 perm/sec)   p_kst 8.037037e-04   p_cons 1.238407e-01   p_joint 3.777778e-04

Joint ci ratio: 4.000140e-01	ci left: 2.745108e-04	ci right 4.147435e-04	k: 95	n:280000
Cons ci ratio: 1.970954e-02	ci left: 1.225644e-01	ci right 1.250077e-01	k: 34659	n:280000
KS ci ratio: 2.600736e-01	ci left: 7.053688e-04	ci right 9.194672e-04	k: 226	n:280000
RPTN   280000 perm   97 sec   (2892 perm/sec)   p_kst 8.071429e-04   p_cons 1.237821e-01   p_joint 3.392857e-04

Joint ci ratio: 4.000164e-01	ci left: 2.650446e-04	ci right 4.004426e-04	k: 95	n:290000
Cons ci ratio: 1.937747e-02	ci left: 1.224660e-01	ci right 1.248657e-01	k: 35862	n:290000
KS ci ratio: 2.556085e-01	ci left: 7.068494e-04	ci right 9.171264e-04	k: 234	n:290000
RPTN   290000 perm   101 sec   (2860 perm/sec)   p_kst 8.068966e-04   p_cons 1.236621e-01   p_joint 3.275862e-04

Joint ci ratio: 3.979507e-01	ci left: 2.592085e-04	ci right 3.907609e-04	k: 96	n:300000
Cons ci ratio: 1.903763e-02	ci left: 1.226467e-01	ci right 1.250073e-01	k: 37147	n:300000
KS ci ratio: 2.503369e-01	ci left: 7.145083e-04	ci right 9.219972e-04	k: 244	n:300000
RPTN   300000 perm   106 sec   (2829 perm/sec)   p_kst 8.133333e-04   p_cons 1.238233e-01   p_joint 3.200000e-04

Joint ci ratio: 1.968612e-01	ci left: 1.151688e-03	ci right 1.406169e-03	k: 395	n:310000
Cons ci ratio: 1.875016e-02	ci left: 1.224112e-01	ci right 1.247313e-01	k: 38306	n:310000
KS ci ratio: 2.473276e-01	ci left: 7.096074e-04	ci right 9.128150e-04	k: 250	n:310000
RPTN   310000 perm   111 sec   (2798 perm/sec)   p_kst 8.064516e-04   p_cons 1.235677e-01   p_joint 1.274194e-03

Joint ci ratio: 1.944226e-01	ci left: 1.145417e-03	ci right 1.395005e-03	k: 405	n:320000
Cons ci ratio: 1.844467e-02	ci left: 1.225487e-01	ci right 1.248332e-01	k: 39580	n:320000
KS ci ratio: 2.444243e-01	ci left: 7.050268e-04	ci right 9.041928e-04	k: 256	n:320000
RPTN   320000 perm   116 sec   (2769 perm/sec)   p_kst 8.000000e-04   p_cons 1.236875e-01   p_joint 1.265625e-03

Joint ci ratio: 1.968689e-01	ci left: 1.081885e-03	ci right 1.320952e-03	k: 395	n:330000
Cons ci ratio: 1.817320e-02	ci left: 1.224457e-01	ci right 1.246943e-01	k: 40777	n:330000
KS ci ratio: 2.430119e-01	ci left: 6.921975e-04	ci right 8.864389e-04	k: 259	n:330000
RPTN   330000 perm   120 sec   (2740 perm/sec)   p_kst 7.848485e-04   p_cons 1.235667e-01   p_joint 1.196970e-03

Joint ci ratio: 1.934780e-01	ci left: 1.089230e-03	ci right 1.325286e-03	k: 409	n:340000
Cons ci ratio: 1.790023e-02	ci left: 1.225072e-01	ci right 1.247228e-01	k: 42028	n:340000
KS ci ratio: 2.402562e-01	ci left: 6.884172e-04	ci right 8.790809e-04	k: 265	n:340000
RPTN   340000 perm   125 sec   (2711 perm/sec)   p_kst 7.794118e-04   p_cons 1.236118e-01   p_joint 1.202941e-03

Joint ci ratio: 1.946734e-01	ci left: 1.044515e-03	ci right 1.272445e-03	k: 404	n:350000
Cons ci ratio: 1.764060e-02	ci left: 1.225483e-01	ci right 1.247322e-01	k: 43273	n:350000
KS ci ratio: 2.371563e-01	ci left: 6.875520e-04	ci right 8.751583e-04	k: 272	n:350000
RPTN   350000 perm   130 sec   (2684 perm/sec)   p_kst 7.771429e-04   p_cons 1.236371e-01   p_joint 1.154286e-03

Joint ci ratio: 1.920825e-01	ci left: 1.044577e-03	ci right 1.269132e-03	k: 415	n:360000
Cons ci ratio: 1.739463e-02	ci left: 1.225542e-01	ci right 1.247074e-01	k: 44506	n:360000
KS ci ratio: 2.325171e-01	ci left: 6.972118e-04	ci right 8.831977e-04	k: 283	n:360000
RPTN   360000 perm   136 sec   (2656 perm/sec)   p_kst 7.861111e-04   p_cons 1.236278e-01   p_joint 1.152778e-03

Joint ci ratio: 1.904877e-01	ci left: 1.034358e-03	ci right 1.254656e-03	k: 422	n:370000
Cons ci ratio: 1.715952e-02	ci left: 1.225492e-01	ci right 1.246729e-01	k: 45735	n:370000
KS ci ratio: 2.304979e-01	ci left: 6.910978e-04	ci right 8.736238e-04	k: 288	n:370000
RPTN   370000 perm   141 sec   (2629 perm/sec)   p_kst 7.783784e-04   p_cons 1.236081e-01   p_joint 1.140541e-03

Joint ci ratio: 1.942028e-01	ci left: 9.670566e-04	ci right 1.177513e-03	k: 406	n:380000
Cons ci ratio: 1.692567e-02	ci left: 1.226469e-01	ci right 1.247431e-01	k: 47003	n:380000
KS ci ratio: 2.273723e-01	ci left: 6.927564e-04	ci right 8.728915e-04	k: 296	n:380000
RPTN   380000 perm   146 sec   (2603 perm/sec)   p_kst 7.789474e-04   p_cons 1.236921e-01   p_joint 1.068421e-03

Joint ci ratio: 1.949260e-01	ci left: 9.349411e-04	ci right 1.139256e-03	k: 403	n:390000
Cons ci ratio: 1.670785e-02	ci left: 1.226529e-01	ci right 1.247219e-01	k: 48237	n:390000
KS ci ratio: 2.262340e-01	ci left: 6.822482e-04	ci right 8.586389e-04	k: 299	n:390000
RPTN   390000 perm   151 sec   (2577 perm/sec)   p_kst 7.666667e-04   p_cons 1.236846e-01   p_joint 1.033333e-03

Joint ci ratio: 1.925575e-01	ci left: 9.353550e-04	ci right 1.136985e-03	k: 413	n:400000
Cons ci ratio: 1.649366e-02	ci left: 1.227185e-01	ci right 1.247619e-01	k: 49495	n:400000
KS ci ratio: 2.232764e-01	ci left: 6.840662e-04	ci right 8.582969e-04	k: 307	n:400000
RPTN   400000 perm   157 sec   (2552 perm/sec)   p_kst 7.675000e-04   p_cons 1.237375e-01   p_joint 1.032500e-03

Joint ci ratio: 1.909508e-01	ci left: 9.287947e-04	ci right 1.127146e-03	k: 420	n:410000
Cons ci ratio: 1.629337e-02	ci left: 1.227034e-01	ci right 1.247215e-01	k: 50721	n:410000
KS ci ratio: 2.197372e-01	ci left: 6.904190e-04	ci right 8.631038e-04	k: 317	n:410000
RPTN   410000 perm   162 sec   (2526 perm/sec)   p_kst 7.731707e-04   p_cons 1.237098e-01   p_joint 1.024390e-03

Joint ci ratio: 1.900515e-01	ci left: 9.157495e-04	ci right 1.110288e-03	k: 424	n:420000
Cons ci ratio: 1.609507e-02	ci left: 1.227579e-01	ci right 1.247521e-01	k: 51976	n:420000
KS ci ratio: 2.173581e-01	ci left: 6.897348e-04	ci right 8.601313e-04	k: 324	n:420000
RPTN   420000 perm   168 sec   (2501 perm/sec)   p_kst 7.714286e-04   p_cons 1.237524e-01   p_joint 1.009524e-03

Joint ci ratio: 1.880708e-01	ci left: 9.143926e-04	ci right 1.106387e-03	k: 433	n:430000
Cons ci ratio: 1.589992e-02	ci left: 1.228633e-01	ci right 1.248348e-01	k: 53254	n:430000
KS ci ratio: 2.144093e-01	ci left: 6.934933e-04	ci right 8.621882e-04	k: 333	n:430000
RPTN   430000 perm   174 sec   (2477 perm/sec)   p_kst 7.744186e-04   p_cons 1.238465e-01   p_joint 1.006977e-03

Joint ci ratio: 1.887270e-01	ci left: 8.871131e-04	ci right 1.074104e-03	k: 430	n:440000
Cons ci ratio: 1.571845e-02	ci left: 1.228712e-01	ci right 1.248201e-01	k: 54491	n:440000
KS ci ratio: 2.097493e-01	ci left: 7.100132e-04	ci right 8.784908e-04	k: 348	n:440000
RPTN   440000 perm   179 sec   (2452 perm/sec)   p_kst 7.909091e-04   p_cons 1.238432e-01   p_joint 9.772727e-04

Joint ci ratio: 1.969005e-01	ci left: 7.933707e-04	ci right 9.687140e-04	k: 395	n:450000
Cons ci ratio: 1.554241e-02	ci left: 1.228878e-01	ci right 1.248149e-01	k: 55732	n:450000
KS ci ratio: 2.073859e-01	ci left: 7.110844e-04	ci right 8.776738e-04	k: 356	n:450000
RPTN   450000 perm   185 sec   (2428 perm/sec)   p_kst 7.911111e-04   p_cons 1.238489e-01   p_joint 8.777778e-04

Joint ci ratio: 1.951833e-01	ci left: 7.905938e-04	ci right 9.636185e-04	k: 402	n:460000
Cons ci ratio: 1.537278e-02	ci left: 1.228950e-01	ci right 1.248010e-01	k: 56969	n:460000
KS ci ratio: 2.034340e-01	ci left: 7.244961e-04	ci right 8.905912e-04	k: 370	n:460000
RPTN   460000 perm   191 sec   (2405 perm/sec)   p_kst 8.043478e-04   p_cons 1.238457e-01   p_joint 8.739130e-04

Joint ci ratio: 2.177025e-01	ci left: 6.143444e-04	ci right 7.663883e-04	k: 323	n:470000
Cons ci ratio: 1.471314e-02	ci left: 1.302466e-01	ci right 1.321792e-01	k: 61669	n:470000
KS ci ratio: 2.012755e-01	ci left: 7.252401e-04	ci right 8.895250e-04	k: 378	n:470000
RPTN   470000 perm   197 sec   (2382 perm/sec)   p_kst 8.042553e-04   p_cons 1.312106e-01   p_joint 6.872340e-04

Joint ci ratio: 2.157145e-01	ci left: 6.133671e-04	ci right 7.635993e-04	k: 329	n:480000
Cons ci ratio: 1.456082e-02	ci left: 1.302295e-01	ci right 1.321417e-01	k: 62968	n:480000
KS ci ratio: 1.994423e-01	ci left: 7.239827e-04	ci right 8.863073e-04	k: 385	n:480000
RPTN   480000 perm   203 sec   (2360 perm/sec)   p_kst 8.020833e-04   p_cons 1.311833e-01   p_joint 6.854167e-04

Joint ci ratio: 2.144195e-01	ci left: 6.085728e-04	ci right 7.566182e-04	k: 333	n:490000
Cons ci ratio: 1.440927e-02	ci left: 1.302742e-01	ci right 1.321669e-01	k: 64297	n:490000
KS ci ratio: 1.971569e-01	ci left: 7.266630e-04	ci right 8.874973e-04	k: 394	n:490000
RPTN   490000 perm   210 sec   (2338 perm/sec)   p_kst 8.040816e-04   p_cons 1.312184e-01   p_joint 6.795918e-04

Joint ci ratio: 2.225718e-01	ci left: 5.510253e-04	ci right 6.908666e-04	k: 309	n:500000
Cons ci ratio: 1.426284e-02	ci left: 1.303092e-01	ci right 1.321831e-01	k: 65622	n:500000
KS ci ratio: 1.949483e-01	ci left: 7.292464e-04	ci right 8.886297e-04	k: 403	n:500000
RPTN   500000 perm   216 sec   (2316 perm/sec)   p_kst 8.060000e-04   p_cons 1.312440e-01   p_joint 6.180000e-04

Joint ci ratio: 2.313249e-01	ci left: 4.976840e-04	ci right 6.296659e-04	k: 286	n:510000
Cons ci ratio: 1.366699e-02	ci left: 1.379519e-01	ci right 1.398522e-01	k: 70839	n:510000
KS ci ratio: 1.911975e-01	ci left: 7.448042e-04	ci right 9.040919e-04	k: 419	n:510000
RPTN   510000 perm   222 sec   (2295 perm/sec)   p_kst 8.215686e-04   p_cons 1.389000e-01   p_joint 5.607843e-04

Joint ci ratio: 2.285542e-01	ci left: 5.007994e-04	ci right 6.317924e-04	k: 293	n:520000
Cons ci ratio: 1.353962e-02	ci left: 1.378786e-01	ci right 1.397600e-01	k: 72185	n:520000
KS ci ratio: 1.900700e-01	ci left: 7.396373e-04	ci right 8.967795e-04	k: 424	n:520000
RPTN   520000 perm   229 sec   (2273 perm/sec)   p_kst 8.153846e-04   p_cons 1.388173e-01   p_joint 5.634615e-04

Joint ci ratio: 1.504502e-01	ci left: 1.182992e-03	ci right 1.377242e-03	k: 677	n:530000
Cons ci ratio: 1.341606e-02	ci left: 1.378025e-01	ci right 1.396656e-01	k: 73528	n:530000
KS ci ratio: 1.887428e-01	ci left: 7.364658e-04	ci right 8.917163e-04	k: 430	n:530000
RPTN   530000 perm   235 sec   (2252 perm/sec)   p_kst 8.113208e-04   p_cons 1.387321e-01   p_joint 1.277358e-03

Joint ci ratio: 1.494620e-01	ci left: 1.177126e-03	ci right 1.369030e-03	k: 686	n:540000
Cons ci ratio: 1.328944e-02	ci left: 1.378438e-01	ci right 1.396897e-01	k: 74933	n:540000
KS ci ratio: 1.874430e-01	ci left: 7.334153e-04	ci right 8.868368e-04	k: 436	n:540000
RPTN   540000 perm   242 sec   (2232 perm/sec)   p_kst 8.074074e-04   p_cons 1.387648e-01   p_joint 1.270370e-03

Joint ci ratio: 1.488145e-01	ci left: 1.166225e-03	ci right 1.355455e-03	k: 692	n:550000
Cons ci ratio: 1.316824e-02	ci left: 1.378492e-01	ci right 1.396782e-01	k: 76319	n:550000
KS ci ratio: 1.849205e-01	ci left: 7.408821e-04	ci right 8.935461e-04	k: 448	n:550000
RPTN   550000 perm   249 sec   (2212 perm/sec)   p_kst 8.145455e-04   p_cons 1.387618e-01   p_joint 1.258182e-03

Joint ci ratio: 1.475426e-01	ci left: 1.166034e-03	ci right 1.353473e-03	k: 704	n:560000
Cons ci ratio: 1.304835e-02	ci left: 1.378901e-01	ci right 1.397029e-01	k: 77725	n:560000
KS ci ratio: 1.832949e-01	ci left: 7.412794e-04	ci right 8.925333e-04	k: 456	n:560000
RPTN   560000 perm   256 sec   (2192 perm/sec)   p_kst 8.142857e-04   p_cons 1.387946e-01   p_joint 1.257143e-03

Joint ci ratio: 1.468163e-01	ci left: 1.157405e-03	ci right 1.342461e-03	k: 711	n:570000
Cons ci ratio: 1.293234e-02	ci left: 1.379174e-01	ci right 1.397143e-01	k: 79124	n:570000
KS ci ratio: 1.817113e-01	ci left: 7.416684e-04	ci right 8.915504e-04	k: 464	n:570000
RPTN   570000 perm   263 sec   (2171 perm/sec)   p_kst 8.140351e-04   p_cons 1.388140e-01   p_joint 1.247368e-03

Joint ci ratio: 1.457963e-01	ci left: 1.154060e-03	ci right 1.337187e-03	k: 721	n:580000
Cons ci ratio: 1.281872e-02	ci left: 1.379559e-01	ci right 1.397374e-01	k: 80530	n:580000
KS ci ratio: 1.807427e-01	ci left: 7.371105e-04	ci right 8.851904e-04	k: 469	n:580000
RPTN   580000 perm   270 sec   (2152 perm/sec)   p_kst 8.086207e-04   p_cons 1.388448e-01   p_joint 1.243103e-03

Joint ci ratio: 1.446984e-01	ci left: 1.152466e-03	ci right 1.333844e-03	k: 732	n:590000
Cons ci ratio: 1.271065e-02	ci left: 1.379441e-01	ci right 1.397103e-01	k: 81907	n:590000
KS ci ratio: 1.784780e-01	ci left: 7.440419e-04	ci right 8.914393e-04	k: 481	n:590000
RPTN   590000 perm   277 sec   (2131 perm/sec)   p_kst 8.152542e-04   p_cons 1.388254e-01   p_joint 1.240678e-03

Joint ci ratio: 1.434320e-01	ci left: 1.154144e-03	ci right 1.334060e-03	k: 745	n:600000
Cons ci ratio: 1.259807e-02	ci left: 1.380690e-01	ci right 1.398211e-01	k: 83366	n:600000
KS ci ratio: 1.755863e-01	ci left: 7.571268e-04	ci right 9.044284e-04	k: 497	n:600000
RPTN   600000 perm   284 sec   (2113 perm/sec)   p_kst 8.283333e-04   p_cons 1.389433e-01   p_joint 1.241667e-03

Joint ci ratio: 1.438201e-01	ci left: 1.128901e-03	ci right 1.305399e-03	k: 741	n:610000
Cons ci ratio: 1.248852e-02	ci left: 1.381883e-01	ci right 1.399266e-01	k: 84824	n:610000
KS ci ratio: 1.747119e-01	ci left: 7.525521e-04	ci right 8.981576e-04	k: 502	n:610000
RPTN   610000 perm   291 sec   (2095 perm/sec)   p_kst 8.229508e-04   p_cons 1.390557e-01   p_joint 1.214754e-03

Joint ci ratio: 1.422936e-01	ci left: 1.135576e-03	ci right 1.311073e-03	k: 757	n:620000
Cons ci ratio: 1.238820e-02	ci left: 1.381800e-01	ci right 1.399040e-01	k: 86205	n:620000
KS ci ratio: 1.740220e-01	ci left: 7.465840e-04	ci right 8.904044e-04	k: 506	n:620000
RPTN   620000 perm   299 sec   (2077 perm/sec)   p_kst 8.161290e-04   p_cons 1.390403e-01   p_joint 1.220968e-03

Joint ci ratio: 1.466190e-01	ci left: 1.050230e-03	ci right 1.217904e-03	k: 713	n:630000
Cons ci ratio: 1.228374e-02	ci left: 1.382986e-01	ci right 1.400095e-01	k: 87666	n:630000
KS ci ratio: 1.724976e-01	ci left: 7.483998e-04	ci right 8.911755e-04	k: 515	n:630000
RPTN   630000 perm   306 sec   (2059 perm/sec)   p_kst 8.174603e-04   p_cons 1.391524e-01   p_joint 1.131746e-03

Joint ci ratio: 1.491513e-01	ci left: 9.977056e-04	ci right 1.159990e-03	k: 689	n:640000
Cons ci ratio: 1.218489e-02	ci left: 1.383543e-01	ci right 1.400520e-01	k: 89089	n:640000
KS ci ratio: 1.713394e-01	ci left: 7.471729e-04	ci right 8.886586e-04	k: 522	n:640000
RPTN   640000 perm   313 sec   (2042 perm/sec)   p_kst 8.156250e-04   p_cons 1.392016e-01   p_joint 1.076563e-03

Joint ci ratio: 1.489366e-01	ci left: 9.853180e-04	ci right 1.145336e-03	k: 691	n:650000
Cons ci ratio: 1.209274e-02	ci left: 1.383225e-01	ci right 1.400069e-01	k: 90456	n:650000
KS ci ratio: 1.698839e-01	ci left: 7.489329e-04	ci right 8.894237e-04	k: 531	n:650000
RPTN   650000 perm   321 sec   (2025 perm/sec)   p_kst 8.169231e-04   p_cons 1.391631e-01   p_joint 1.063077e-03

Joint ci ratio: 1.477667e-01	ci left: 9.864370e-04	ci right 1.145267e-03	k: 702	n:660000
Cons ci ratio: 1.200280e-02	ci left: 1.382886e-01	ci right 1.399600e-01	k: 91821	n:660000
KS ci ratio: 1.679992e-01	ci left: 7.549987e-04	ci right 8.948972e-04	k: 543	n:660000
RPTN   660000 perm   329 sec   (2008 perm/sec)   p_kst 8.227273e-04   p_cons 1.391227e-01   p_joint 1.063636e-03

Joint ci ratio: 1.464189e-01	ci left: 9.904031e-04	ci right 1.148290e-03	k: 715	n:670000
Cons ci ratio: 1.190787e-02	ci left: 1.383958e-01	ci right 1.400551e-01	k: 93280	n:670000
KS ci ratio: 1.664758e-01	ci left: 7.580308e-04	ci right 8.970899e-04	k: 553	n:670000
RPTN   670000 perm   336 sec   (1992 perm/sec)   p_kst 8.253731e-04   p_cons 1.392239e-01   p_joint 1.067164e-03

Joint ci ratio: 1.458097e-01	ci left: 9.843390e-04	ci right 1.140550e-03	k: 721	n:680000
Cons ci ratio: 1.182269e-02	ci left: 1.383473e-01	ci right 1.399941e-01	k: 94635	n:680000
KS ci ratio: 1.657301e-01	ci left: 7.539305e-04	ci right 8.915559e-04	k: 558	n:680000
RPTN   680000 perm   344 sec   (1976 perm/sec)   p_kst 8.205882e-04   p_cons 1.391691e-01   p_joint 1.060294e-03

Joint ci ratio: 1.446128e-01	ci left: 9.868328e-04	ci right 1.142043e-03	k: 733	n:690000
Cons ci ratio: 1.173540e-02	ci left: 1.383797e-01	ci right 1.400146e-01	k: 96045	n:690000
KS ci ratio: 1.645568e-01	ci left: 7.541190e-04	ci right 8.907078e-04	k: 566	n:690000
RPTN   690000 perm   352 sec   (1960 perm/sec)   p_kst 8.202899e-04   p_cons 1.391957e-01   p_joint 1.062319e-03

Joint ci ratio: 1.435411e-01	ci left: 9.878830e-04	ci right 1.142008e-03	k: 744	n:700000
Cons ci ratio: 1.164760e-02	ci left: 1.384611e-01	ci right 1.400847e-01	k: 97490	n:700000
KS ci ratio: 1.634080e-01	ci left: 7.543054e-04	ci right 8.898805e-04	k: 574	n:700000
RPTN   700000 perm   360 sec   (1944 perm/sec)   p_kst 8.200000e-04   p_cons 1.392714e-01   p_joint 1.062857e-03

Joint ci ratio: 1.425874e-01	ci left: 9.875495e-04	ci right 1.140512e-03	k: 754	n:710000
Cons ci ratio: 1.156506e-02	ci left: 1.384715e-01	ci right 1.400836e-01	k: 98886	n:710000
KS ci ratio: 1.625623e-01	ci left: 7.517873e-04	ci right 8.861422e-04	k: 580	n:710000
RPTN   710000 perm   368 sec   (1929 perm/sec)   p_kst 8.169014e-04   p_cons 1.392761e-01   p_joint 1.061972e-03

Joint ci ratio: 1.423057e-01	ci left: 9.778514e-04	ci right 1.128987e-03	k: 757	n:720000
Cons ci ratio: 1.148026e-02	ci left: 1.385647e-01	ci right 1.401660e-01	k: 100342	n:720000
KS ci ratio: 1.613176e-01	ci left: 7.533393e-04	ci right 8.868408e-04	k: 589	n:720000
RPTN   720000 perm   376 sec   (1913 perm/sec)   p_kst 8.180556e-04   p_cons 1.393639e-01   p_joint 1.051389e-03

Joint ci ratio: 1.419324e-01	ci left: 9.697405e-04	ci right 1.119196e-03	k: 761	n:730000
Cons ci ratio: 1.140309e-02	ci left: 1.385338e-01	ci right 1.401239e-01	k: 101709	n:730000
KS ci ratio: 1.606387e-01	ci left: 7.495929e-04	ci right 8.818174e-04	k: 594	n:730000
RPTN   730000 perm   384 sec   (1899 perm/sec)   p_kst 8.136986e-04   p_cons 1.393274e-01   p_joint 1.042466e-03

Joint ci ratio: 1.427799e-01	ci left: 9.449060e-04	ci right 1.091478e-03	k: 752	n:740000
Cons ci ratio: 1.132721e-02	ci left: 1.385091e-01	ci right 1.400883e-01	k: 103080	n:740000
KS ci ratio: 1.598351e-01	ci left: 7.472462e-04	ci right 8.783340e-04	k: 600	n:740000
RPTN   740000 perm   393 sec   (1883 perm/sec)   p_kst 8.108108e-04   p_cons 1.392973e-01   p_joint 1.016216e-03

Joint ci ratio: 1.423087e-01	ci left: 9.387360e-04	ci right 1.083829e-03	k: 757	n:750000
Cons ci ratio: 1.124906e-02	ci left: 1.385650e-01	ci right 1.401338e-01	k: 104511	n:750000
KS ci ratio: 1.578763e-01	ci left: 7.564881e-04	ci right 8.874169e-04	k: 615	n:750000
RPTN   750000 perm   401 sec   (1869 perm/sec)   p_kst 8.200000e-04   p_cons 1.393480e-01   p_joint 1.009333e-03

Joint ci ratio: 1.442270e-01	ci left: 9.010104e-04	ci right 1.042311e-03	k: 737	n:760000
Cons ci ratio: 1.117239e-02	ci left: 1.386220e-01	ci right 1.401807e-01	k: 105944	n:760000
KS ci ratio: 1.572398e-01	ci left: 7.528538e-04	ci right 8.825787e-04	k: 620	n:760000
RPTN   760000 perm   410 sec   (1854 perm/sec)   p_kst 8.157895e-04   p_cons 1.394000e-01   p_joint 9.697368e-04

Joint ci ratio: 1.436446e-01	ci left: 8.968204e-04	ci right 1.036848e-03	k: 743	n:770000
Cons ci ratio: 1.110068e-02	ci left: 1.386038e-01	ci right 1.401522e-01	k: 107320	n:770000
KS ci ratio: 1.559887e-01	ci left: 7.555546e-04	ci right 8.846121e-04	k: 630	n:770000
RPTN   770000 perm   419 sec   (1840 perm/sec)   p_kst 8.181818e-04   p_cons 1.393766e-01   p_joint 9.649351e-04

Joint ci ratio: 1.427837e-01	ci left: 8.964477e-04	ci right 1.035506e-03	k: 752	n:780000
Cons ci ratio: 1.102922e-02	ci left: 1.386103e-01	ci right 1.401488e-01	k: 108715	n:780000
KS ci ratio: 1.551307e-01	ci left: 7.544930e-04	ci right 8.825944e-04	k: 637	n:780000
RPTN   780000 perm   427 sec   (1825 perm/sec)   p_kst 8.166667e-04   p_cons 1.393782e-01   p_joint 9.641026e-04

Joint ci ratio: 1.428795e-01	ci left: 8.838793e-04	ci right 1.021088e-03	k: 751	n:790000
Cons ci ratio: 1.095531e-02	ci left: 1.387001e-01	ci right 1.402292e-01	k: 110176	n:790000
KS ci ratio: 1.544066e-01	ci left: 7.522432e-04	ci right 8.793112e-04	k: 643	n:790000
RPTN   790000 perm   436 sec   (1811 perm/sec)   p_kst 8.139241e-04   p_cons 1.394633e-01   p_joint 9.506329e-04

Joint ci ratio: 1.423133e-01	ci left: 8.800631e-04	ci right 1.016092e-03	k: 757	n:800000
Cons ci ratio: 1.088723e-02	ci left: 1.386916e-01	ci right 1.402110e-01	k: 111560	n:800000
KS ci ratio: 1.536925e-01	ci left: 7.500510e-04	ci right 8.761088e-04	k: 649	n:800000
RPTN   800000 perm   445 sec   (1797 perm/sec)   p_kst 8.112500e-04   p_cons 1.394500e-01   p_joint 9.462500e-04

Joint ci ratio: 1.420330e-01	ci left: 8.727698e-04	ci right 1.007383e-03	k: 760	n:810000
Cons ci ratio: 1.082051e-02	ci left: 1.386809e-01	ci right 1.401908e-01	k: 112942	n:810000
KS ci ratio: 1.532221e-01	ci left: 7.455396e-04	ci right 8.704206e-04	k: 653	n:810000
RPTN   810000 perm   454 sec   (1783 perm/sec)   p_kst 8.061728e-04   p_cons 1.394346e-01   p_joint 9.382716e-04

Joint ci ratio: 1.412924e-01	ci left: 8.715366e-04	ci right 1.005200e-03	k: 768	n:820000
Cons ci ratio: 1.075238e-02	ci left: 1.387289e-01	ci right 1.402298e-01	k: 114372	n:820000
KS ci ratio: 1.524088e-01	ci left: 7.446578e-04	ci right 8.686685e-04	k: 660	n:820000
RPTN   820000 perm   464 sec   (1768 perm/sec)   p_kst 8.048780e-04   p_cons 1.394780e-01   p_joint 9.365854e-04

Joint ci ratio: 1.407447e-01	ci left: 8.680099e-04	ci right 1.000573e-03	k: 774	n:830000
Cons ci ratio: 1.068993e-02	ci left: 1.386771e-01	ci right 1.401687e-01	k: 115720	n:830000
KS ci ratio: 1.513816e-01	ci left: 7.461173e-04	ci right 8.694577e-04	k: 669	n:830000
RPTN   830000 perm   473 sec   (1755 perm/sec)   p_kst 8.060241e-04   p_cons 1.394217e-01   p_joint 9.325301e-04

Joint ci ratio: 1.409276e-01	ci left: 8.553790e-04	ci right 9.861972e-04	k: 772	n:840000
Cons ci ratio: 1.063065e-02	ci left: 1.385792e-01	ci right 1.400614e-01	k: 117028	n:840000
KS ci ratio: 1.502642e-01	ci left: 7.486905e-04	ci right 8.714607e-04	k: 679	n:840000
RPTN   840000 perm   482 sec   (1742 perm/sec)   p_kst 8.083333e-04   p_cons 1.393190e-01   p_joint 9.190476e-04

Joint ci ratio: 1.419429e-01	ci left: 8.328317e-04	ci right 9.611970e-04	k: 761	n:850000
Cons ci ratio: 1.056929e-02	ci left: 1.385528e-01	ci right 1.400261e-01	k: 118395	n:850000
KS ci ratio: 1.497151e-01	ci left: 7.455439e-04	ci right 8.673112e-04	k: 684	n:850000
RPTN   850000 perm   492 sec   (1728 perm/sec)   p_kst 8.047059e-04   p_cons 1.392882e-01   p_joint 8.952941e-04

Joint ci ratio: 1.587901e-01	ci left: 6.519082e-04	ci right 7.654519e-04	k: 608	n:860000
Cons ci ratio: 1.050751e-02	ci left: 1.385607e-01	ci right 1.400255e-01	k: 119791	n:860000
KS ci ratio: 1.485270e-01	ci left: 7.491883e-04	ci right 8.704937e-04	k: 695	n:860000
RPTN   860000 perm   501 sec   (1716 perm/sec)   p_kst 8.081395e-04   p_cons 1.392919e-01   p_joint 7.069767e-04

Joint ci ratio: 1.575020e-01	ci left: 6.554544e-04	ci right 7.686023e-04	k: 618	n:870000
Cons ci ratio: 1.044664e-02	ci left: 1.385719e-01	ci right 1.400282e-01	k: 121190	n:870000
KS ci ratio: 1.473668e-01	ci left: 7.527527e-04	ci right 8.735993e-04	k: 706	n:870000
RPTN   870000 perm   511 sec   (1703 perm/sec)   p_kst 8.114943e-04   p_cons 1.392989e-01   p_joint 7.103448e-04

Joint ci ratio: 1.614666e-01	ci left: 6.152745e-04	ci right 7.244193e-04	k: 588	n:880000
Cons ci ratio: 1.038780e-02	ci left: 1.385602e-01	ci right 1.400081e-01	k: 122569	n:880000
KS ci ratio: 1.465400e-01	ci left: 7.529554e-04	ci right 8.730970e-04	k: 714	n:880000
RPTN   880000 perm   520 sec   (1691 perm/sec)   p_kst 8.113636e-04   p_cons 1.392830e-01   p_joint 6.681818e-04

Joint ci ratio: 1.602468e-01	ci left: 6.180667e-04	ci right 7.267988e-04	k: 597	n:890000
Cons ci ratio: 1.032976e-02	ci left: 1.385532e-01	ci right 1.399930e-01	k: 123952	n:890000
KS ci ratio: 1.452254e-01	ci left: 7.585689e-04	ci right 8.784262e-04	k: 727	n:890000
RPTN   890000 perm   531 sec   (1677 perm/sec)   p_kst 8.168539e-04   p_cons 1.392719e-01   p_joint 6.707865e-04

Joint ci ratio: 1.683276e-01	ci left: 5.515321e-04	ci right 6.539487e-04	k: 541	n:900000
Cons ci ratio: 1.027229e-02	ci left: 1.385553e-01	ci right 1.399870e-01	k: 125343	n:900000
KS ci ratio: 1.446307e-01	ci left: 7.565653e-04	ci right 8.755742e-04	k: 733	n:900000
RPTN   900000 perm   541 sec   (1665 perm/sec)   p_kst 8.144444e-04   p_cons 1.392700e-01   p_joint 6.011111e-04

Joint ci ratio: 1.677101e-01	ci left: 5.496820e-04	ci right 6.513427e-04	k: 545	n:910000
Cons ci ratio: 1.021521e-02	ci left: 1.385705e-01	ci right 1.399944e-01	k: 126746	n:910000
KS ci ratio: 1.439461e-01	ci left: 7.556659e-04	ci right 8.739224e-04	k: 740	n:910000
RPTN   910000 perm   550 sec   (1653 perm/sec)   p_kst 8.131868e-04   p_cons 1.392813e-01   p_joint 5.989011e-04

Joint ci ratio: 1.667961e-01	ci left: 5.499559e-04	ci right 6.510574e-04	k: 551	n:920000
Cons ci ratio: 1.016124e-02	ci left: 1.385345e-01	ci right 1.399504e-01	k: 128102	n:920000
KS ci ratio: 1.429844e-01	ci left: 7.579317e-04	ci right 8.756826e-04	k: 750	n:920000
RPTN   920000 perm   561 sec   (1641 perm/sec)   p_kst 8.152174e-04   p_cons 1.392413e-01   p_joint 5.989130e-04

Joint ci ratio: 1.247087e-01	ci left: 9.950947e-04	ci right 1.128474e-03	k: 986	n:930000
Cons ci ratio: 1.010748e-02	ci left: 1.385142e-01	ci right 1.399224e-01	k: 129472	n:930000
KS ci ratio: 1.422288e-01	ci left: 7.580771e-04	ci right 8.751755e-04	k: 758	n:930000
RPTN   930000 perm   571 sec   (1630 perm/sec)   p_kst 8.150538e-04   p_cons 1.392172e-01   p_joint 1.060215e-03

Joint ci ratio: 1.241441e-01	ci left: 9.937850e-04	ci right 1.126342e-03	k: 995	n:940000
Cons ci ratio: 1.005282e-02	ci left: 1.385358e-01	ci right 1.399366e-01	k: 130881	n:940000
KS ci ratio: 1.415776e-01	ci left: 7.571948e-04	ci right 8.735762e-04	k: 765	n:940000
RPTN   940000 perm   581 sec   (1618 perm/sec)   p_kst 8.138298e-04   p_cons 1.392351e-01   p_joint 1.058511e-03

Joint ci ratio: 1.254116e-01	ci left: 9.629276e-04	ci right 1.092777e-03	k: 975	n:950000
Cons ci ratio: 9.998909e-03	ci left: 1.385602e-01	ci right 1.399536e-01	k: 132293	n:950000
KS ci ratio: 1.406622e-01	ci left: 7.593791e-04	ci right 8.752783e-04	k: 775	n:950000
RPTN   950000 perm   591 sec   (1607 perm/sec)   p_kst 8.157895e-04   p_cons 1.392558e-01   p_joint 1.026316e-03

Joint ci ratio: 1.250919e-01	ci left: 9.579421e-04	ci right 1.086766e-03	k: 980	n:960000
Cons ci ratio: 9.946504e-03	ci left: 1.385684e-01	ci right 1.399546e-01	k: 133690	n:960000
KS ci ratio: 1.399427e-01	ci left: 7.595097e-04	ci right 8.747865e-04	k: 783	n:960000
RPTN   960000 perm   601 sec   (1597 perm/sec)   p_kst 8.156250e-04   p_cons 1.392604e-01   p_joint 1.020833e-03

Joint ci ratio: 1.249652e-01	ci left: 9.500636e-04	ci right 1.077689e-03	k: 982	n:970000
Cons ci ratio: 9.897042e-03	ci left: 1.385251e-01	ci right 1.399039e-01	k: 135037	n:970000
KS ci ratio: 1.394989e-01	ci left: 7.566541e-04	ci right 8.711029e-04	k: 788	n:970000
RPTN   970000 perm   612 sec   (1586 perm/sec)   p_kst 8.123711e-04   p_cons 1.392134e-01   p_joint 1.012371e-03

Joint ci ratio: 1.243971e-01	ci left: 9.492663e-04	ci right 1.076162e-03	k: 991	n:980000
Cons ci ratio: 9.843993e-03	ci left: 1.385875e-01	ci right 1.399595e-01	k: 136487	n:980000
KS ci ratio: 1.388842e-01	ci left: 7.558272e-04	ci right 8.696056e-04	k: 795	n:980000
RPTN   980000 perm   623 sec   (1574 perm/sec)   p_kst 8.112245e-04   p_cons 1.392724e-01   p_joint 1.011224e-03

Joint ci ratio: 1.237748e-01	ci left: 9.494652e-04	ci right 1.075706e-03	k: 1001	n:990000
Cons ci ratio: 9.792158e-03	ci left: 1.386396e-01	ci right 1.400049e-01	k: 137928	n:990000
KS ci ratio: 1.383639e-01	ci left: 7.540430e-04	ci right 8.670924e-04	k: 801	n:990000
RPTN   990000 perm   633 sec   (1564 perm/sec)   p_kst 8.090909e-04   p_cons 1.393212e-01   p_joint 1.011111e-03

Joint ci ratio: 1.237754e-01	ci left: 9.399703e-04	ci right 1.064949e-03	k: 1001	n:1000000
Cons ci ratio: 9.743977e-03	ci left: 1.386209e-01	ci right 1.399792e-01	k: 139299	n:1000000
KS ci ratio: 1.374244e-01	ci left: 7.571231e-04	ci right 8.698006e-04	k: 812	n:1000000
RPTN   1000000 perm   644 sec   (1553 perm/sec)   p_kst 8.120000e-04   p_cons 1.392990e-01   p_joint 1.001000e-03

Joint ci ratio: 1.235909e-01	ci left: 9.335418e-04	ci right 1.057467e-03	k: 1004	n:1010000
Cons ci ratio: 9.694019e-03	ci left: 1.386638e-01	ci right 1.400155e-01	k: 140732	n:1010000
KS ci ratio: 1.366700e-01	ci left: 7.582323e-04	ci right 8.704049e-04	k: 821	n:1010000
RPTN   1010000 perm   654 sec   (1543 perm/sec)   p_kst 8.128713e-04   p_cons 1.393386e-01   p_joint 9.940594e-04

Joint ci ratio: 1.234686e-01	ci left: 9.262894e-04	ci right 1.049122e-03	k: 1006	n:1020000
Cons ci ratio: 9.645215e-03	ci left: 1.386961e-01	ci right 1.400413e-01	k: 142155	n:1020000
KS ci ratio: 1.360097e-01	ci left: 7.583742e-04	ci right 8.699821e-04	k: 829	n:1020000
RPTN   1020000 perm   665 sec   (1534 perm/sec)   p_kst 8.127451e-04   p_cons 1.393676e-01   p_joint 9.862745e-04

Joint ci ratio: 1.243374e-01	ci left: 9.041247e-04	ci right 1.024923e-03	k: 992	n:1030000
Cons ci ratio: 9.598461e-03	ci left: 1.386948e-01	ci right 1.400334e-01	k: 143544	n:1030000
KS ci ratio: 1.354399e-01	ci left: 7.575767e-04	ci right 8.685624e-04	k: 836	n:1030000
RPTN   1030000 perm   676 sec   (1523 perm/sec)   p_kst 8.116505e-04   p_cons 1.393631e-01   p_joint 9.631068e-04

Joint ci ratio: 1.243380e-01	ci left: 8.954310e-04	ci right 1.015069e-03	k: 992	n:1040000
Cons ci ratio: 9.551118e-03	ci left: 1.387253e-01	ci right 1.400575e-01	k: 144966	n:1040000
KS ci ratio: 1.351982e-01	ci left: 7.530792e-04	ci right 8.631932e-04	k: 839	n:1040000
RPTN   1040000 perm   687 sec   (1513 perm/sec)   p_kst 8.067308e-04   p_cons 1.393904e-01   p_joint 9.538462e-04

Joint ci ratio: 1.235933e-01	ci left: 8.979773e-04	ci right 1.017184e-03	k: 1004	n:1050000
Cons ci ratio: 9.508166e-03	ci left: 1.386620e-01	ci right 1.399876e-01	k: 146290	n:1050000
KS ci ratio: 1.347978e-01	ci left: 7.505080e-04	ci right 8.598950e-04	k: 844	n:1050000
RPTN   1050000 perm   699 sec   (1502 perm/sec)   p_kst 8.038095e-04   p_cons 1.393238e-01   p_joint 9.561905e-04

Joint ci ratio: 1.233484e-01	ci left: 8.931627e-04	ci right 1.011478e-03	k: 1008	n:1060000
Cons ci ratio: 9.462773e-03	ci left: 1.386762e-01	ci right 1.399956e-01	k: 147695	n:1060000
KS ci ratio: 1.347185e-01	ci left: 7.443392e-04	ci right 8.527582e-04	k: 845	n:1060000
RPTN   1060000 perm   710 sec   (1493 perm/sec)   p_kst 7.971698e-04   p_cons 1.393349e-01   p_joint 9.509434e-04

Joint ci ratio: 1.230442e-01	ci left: 8.893442e-04	ci right 1.006842e-03	k: 1013	n:1070000
Cons ci ratio: 9.419418e-03	ci left: 1.386547e-01	ci right 1.399678e-01	k: 149062	n:1070000
KS ci ratio: 1.343224e-01	ci left: 7.418983e-04	ci right 8.496186e-04	k: 850	n:1070000
RPTN   1070000 perm   721 sec   (1483 perm/sec)   p_kst 7.943925e-04   p_cons 1.393103e-01   p_joint 9.467290e-04

Joint ci ratio: 1.227422e-01	ci left: 8.855967e-04	ci right 1.002292e-03	k: 1018	n:1080000
Cons ci ratio: 9.376799e-03	ci left: 1.386299e-01	ci right 1.399368e-01	k: 150425	n:1080000
KS ci ratio: 1.339297e-01	ci left: 7.395031e-04	ci right 8.465368e-04	k: 855	n:1080000
RPTN   1080000 perm   733 sec   (1474 perm/sec)   p_kst 7.916667e-04   p_cons 1.392824e-01   p_joint 9.425926e-04

Joint ci ratio: 1.224424e-01	ci left: 8.819184e-04	ci right 9.978241e-04	k: 1023	n:1090000
Cons ci ratio: 9.335467e-03	ci left: 1.385873e-01	ci right 1.398880e-01	k: 151768	n:1090000
KS ci ratio: 1.333082e-01	ci left: 7.398128e-04	ci right 8.463550e-04	k: 863	n:1090000
RPTN   1090000 perm   744 sec   (1465 perm/sec)   p_kst 7.917431e-04   p_cons 1.392367e-01   p_joint 9.385321e-04

Joint ci ratio: 1.218488e-01	ci left: 8.827141e-04	ci right 9.981215e-04	k: 1033	n:1100000
Cons ci ratio: 9.291892e-03	ci left: 1.386171e-01	ci right 1.399120e-01	k: 153190	n:1100000
KS ci ratio: 1.328478e-01	ci left: 7.383601e-04	ci right 8.442970e-04	k: 869	n:1100000
RPTN   1100000 perm   755 sec   (1456 perm/sec)   p_kst 7.900000e-04   p_cons 1.392636e-01   p_joint 9.390909e-04

Joint ci ratio: 1.208589e-01	ci left: 8.896123e-04	ci right 1.004909e-03	k: 1050	n:1110000
Cons ci ratio: 9.250208e-03	ci left: 1.386132e-01	ci right 1.399022e-01	k: 154575	n:1110000
KS ci ratio: 1.319408e-01	ci left: 7.421611e-04	ci right 8.478592e-04	k: 881	n:1110000
RPTN   1110000 perm   767 sec   (1447 perm/sec)   p_kst 7.936937e-04   p_cons 1.392568e-01   p_joint 9.459459e-04

Joint ci ratio: 1.211482e-01	ci left: 8.773399e-04	ci right 9.913378e-04	k: 1045	n:1120000
Cons ci ratio: 9.211516e-03	ci left: 1.385460e-01	ci right 1.398290e-01	k: 155889	n:1120000
KS ci ratio: 1.312726e-01	ci left: 7.433058e-04	ci right 8.485892e-04	k: 890	n:1120000
RPTN   1120000 perm   779 sec   (1438 perm/sec)   p_kst 7.946429e-04   p_cons 1.391866e-01   p_joint 9.330357e-04

Joint ci ratio: 1.206877e-01	ci left: 8.764413e-04	ci right 9.898587e-04	k: 1053	n:1130000
Cons ci ratio: 9.171814e-03	ci left: 1.385190e-01	ci right 1.397962e-01	k: 157247	n:1130000
KS ci ratio: 1.306872e-01	ci left: 7.435756e-04	ci right 8.483910e-04	k: 898	n:1130000
RPTN   1130000 perm   791 sec   (1429 perm/sec)   p_kst 7.946903e-04   p_cons 1.391566e-01   p_joint 9.318584e-04

Joint ci ratio: 1.250383e-01	ci left: 8.075339e-04	ci right 9.160805e-04	k: 981	n:1140000
Cons ci ratio: 9.131751e-03	ci left: 1.385151e-01	ci right 1.397867e-01	k: 158631	n:1140000
KS ci ratio: 1.301096e-01	ci left: 7.438416e-04	ci right 8.481953e-04	k: 906	n:1140000
RPTN   1140000 perm   802 sec   (1421 perm/sec)   p_kst 7.947368e-04   p_cons 1.391500e-01   p_joint 8.605263e-04

Joint ci ratio: 1.244692e-01	ci left: 8.080938e-04	ci right 9.161847e-04	k: 990	n:1150000
Cons ci ratio: 9.091516e-03	ci left: 1.385296e-01	ci right 1.397957e-01	k: 160036	n:1150000
KS ci ratio: 1.295396e-01	ci left: 7.441040e-04	ci right 8.480020e-04	k: 914	n:1150000
RPTN   1150000 perm   814 sec   (1413 perm/sec)   p_kst 7.947826e-04   p_cons 1.391617e-01   p_joint 8.608696e-04

Joint ci ratio: 1.239078e-01	ci left: 8.086451e-04	ci right 9.162861e-04	k: 999	n:1160000
Cons ci ratio: 9.051938e-03	ci left: 1.385404e-01	ci right 1.398010e-01	k: 161437	n:1160000
KS ci ratio: 1.291873e-01	ci left: 7.418601e-04	ci right 8.451415e-04	k: 919	n:1160000
RPTN   1160000 perm   826 sec   (1404 perm/sec)   p_kst 7.922414e-04   p_cons 1.391698e-01   p_joint 8.612069e-04

Joint ci ratio: 1.234151e-01	ci left: 8.083597e-04	ci right 9.155036e-04	k: 1007	n:1170000
Cons ci ratio: 9.013934e-03	ci left: 1.385229e-01	ci right 1.397780e-01	k: 162805	n:1170000
KS ci ratio: 1.284907e-01	ci left: 7.437910e-04	ci right 8.467403e-04	k: 929	n:1170000
RPTN   1170000 perm   839 sec   (1395 perm/sec)   p_kst 7.940171e-04   p_cons 1.391496e-01   p_joint 8.606838e-04

Joint ci ratio: 1.230496e-01	ci left: 8.064371e-04	ci right 9.129866e-04	k: 1013	n:1180000
Cons ci ratio: 8.976658e-03	ci left: 1.384989e-01	ci right 1.397486e-01	k: 164165	n:1180000
KS ci ratio: 1.278053e-01	ci left: 7.456907e-04	ci right 8.483106e-04	k: 939	n:1180000
RPTN   1180000 perm   851 sec   (1387 perm/sec)   p_kst 7.957627e-04   p_cons 1.391229e-01   p_joint 8.584746e-04

Joint ci ratio: 1.237235e-01	ci left: 7.907015e-04	ci right 8.957860e-04	k: 1002	n:1190000
Cons ci ratio: 8.939152e-03	ci left: 1.384938e-01	ci right 1.397382e-01	k: 165547	n:1190000
KS ci ratio: 1.271308e-01	ci left: 7.475598e-04	ci right 8.498531e-04	k: 949	n:1190000
RPTN   1190000 perm   863 sec   (1378 perm/sec)   p_kst 7.974790e-04   p_cons 1.391151e-01   p_joint 8.420168e-04

Joint ci ratio: 1.231721e-01	ci left: 7.913808e-04	ci right 8.960526e-04	k: 1011	n:1200000
Cons ci ratio: 8.904373e-03	ci left: 1.384281e-01	ci right 1.396670e-01	k: 166856	n:1200000
KS ci ratio: 1.266650e-01	ci left: 7.469783e-04	ci right 8.487894e-04	k: 956	n:1200000
RPTN   1200000 perm   876 sec   (1370 perm/sec)   p_kst 7.966667e-04   p_cons 1.390467e-01   p_joint 8.425000e-04

Joint ci ratio: 1.226882e-01	ci left: 7.912487e-04	ci right 8.954620e-04	k: 1019	n:1210000
Cons ci ratio: 8.867363e-03	ci left: 1.384344e-01	ci right 1.396682e-01	k: 168251	n:1210000
KS ci ratio: 1.264013e-01	ci left: 7.440060e-04	ci right 8.451851e-04	k: 960	n:1210000
RPTN   1210000 perm   888 sec   (1362 perm/sec)   p_kst 7.933884e-04   p_cons 1.390504e-01   p_joint 8.421488e-04

Joint ci ratio: 1.221504e-01	ci left: 7.919142e-04	ci right 8.957250e-04	k: 1028	n:1220000
Cons ci ratio: 8.830508e-03	ci left: 1.384488e-01	ci right 1.396775e-01	k: 169656	n:1220000
KS ci ratio: 1.257487e-01	ci left: 7.458458e-04	ci right 8.467124e-04	k: 970	n:1220000
RPTN   1220000 perm   902 sec   (1353 perm/sec)   p_kst 7.950820e-04   p_cons 1.390623e-01   p_joint 8.426230e-04

Joint ci ratio: 1.213858e-01	ci left: 7.957232e-04	ci right 8.993334e-04	k: 1041	n:1230000
Cons ci ratio: 8.795991e-03	ci left: 1.384118e-01	ci right 1.396354e-01	k: 170998	n:1230000
KS ci ratio: 1.249786e-01	ci left: 7.492323e-04	ci right 8.498903e-04	k: 982	n:1230000
RPTN   1230000 perm   915 sec   (1344 perm/sec)   p_kst 7.983740e-04   p_cons 1.390228e-01   p_joint 8.463415e-04

Joint ci ratio: 1.471765e-01	ci left: 5.296900e-04	ci right 6.146065e-04	k: 708	n:1240000
Cons ci ratio: 9.362924e-03	ci left: 1.232723e-01	ci right 1.244327e-01	k: 153576	n:1240000
KS ci ratio: 1.244103e-01	ci left: 7.502218e-04	ci right 8.505207e-04	k: 991	n:1240000
RPTN   1240000 perm   928 sec   (1336 perm/sec)   p_kst 7.991935e-04   p_cons 1.238516e-01   p_joint 5.709677e-04

Joint ci ratio: 1.467632e-01	ci left: 5.285348e-04	ci right 6.130072e-04	k: 712	n:1250000
Cons ci ratio: 9.324521e-03	ci left: 1.232950e-01	ci right 1.244508e-01	k: 154840	n:1250000
KS ci ratio: 1.242854e-01	ci left: 7.457701e-04	ci right 8.453664e-04	k: 993	n:1250000
RPTN   1250000 perm   941 sec   (1329 perm/sec)   p_kst 7.944000e-04   p_cons 1.238720e-01   p_joint 5.696000e-04

Joint ci ratio: 1.459466e-01	ci left: 5.304568e-04	ci right 6.147236e-04	k: 720	n:1260000
Cons ci ratio: 9.287368e-03	ci left: 1.232991e-01	ci right 1.244503e-01	k: 156081	n:1260000
KS ci ratio: 1.237264e-01	ci left: 7.467726e-04	ci right 8.460214e-04	k: 1002	n:1260000
RPTN   1260000 perm   954 sec   (1321 perm/sec)   p_kst 7.952381e-04   p_cons 1.238738e-01   p_joint 5.714286e-04

Joint ci ratio: 1.459469e-01	ci left: 5.262799e-04	ci right 6.098834e-04	k: 720	n:1270000
Cons ci ratio: 9.253006e-03	ci left: 1.232481e-01	ci right 1.243946e-01	k: 157252	n:1270000
KS ci ratio: 1.230534e-01	ci left: 7.492867e-04	ci right 8.482884e-04	k: 1013	n:1270000
RPTN   1270000 perm   967 sec   (1313 perm/sec)   p_kst 7.976378e-04   p_cons 1.238205e-01   p_joint 5.669291e-04

Joint ci ratio: 1.453434e-01	ci left: 5.266850e-04	ci right 6.099768e-04	k: 726	n:1280000
Cons ci ratio: 9.215138e-03	ci left: 1.232892e-01	ci right 1.244313e-01	k: 158540	n:1280000
KS ci ratio: 1.225108e-01	ci left: 7.502482e-04	ci right 8.489082e-04	k: 1022	n:1280000
RPTN   1280000 perm   980 sec   (1306 perm/sec)   p_kst 7.984375e-04   p_cons 1.238594e-01   p_joint 5.671875e-04

Joint ci ratio: 1.449453e-01	ci left: 5.255903e-04	ci right 6.084617e-04	k: 730	n:1290000
Cons ci ratio: 9.177994e-03	ci left: 1.233234e-01	ci right 1.244612e-01	k: 159820	n:1290000
KS ci ratio: 1.219163e-01	ci left: 7.519473e-04	ci right 8.503163e-04	k: 1032	n:1290000
RPTN   1290000 perm   993 sec   (1299 perm/sec)   p_kst 8.000000e-04   p_cons 1.238915e-01   p_joint 5.658915e-04

Joint ci ratio: 1.438666e-01	ci left: 5.297032e-04	ci right 6.125481e-04	k: 741	n:1300000
Cons ci ratio: 9.142300e-03	ci left: 1.233333e-01	ci right 1.244668e-01	k: 161069	n:1300000
KS ci ratio: 1.211561e-01	ci left: 7.558592e-04	ci right 8.540791e-04	k: 1045	n:1300000
RPTN   1300000 perm   1006 sec   (1292 perm/sec)   p_kst 8.038462e-04   p_cons 1.238992e-01   p_joint 5.700000e-04

Joint ci ratio: 1.443544e-01	ci left: 5.219804e-04	ci right 6.039181e-04	k: 736	n:1310000
Cons ci ratio: 9.107115e-03	ci left: 1.233408e-01	ci right 1.244700e-01	k: 162315	n:1310000
KS ci ratio: 1.207528e-01	ci left: 7.552711e-04	ci right 8.530646e-04	k: 1052	n:1310000
RPTN   1310000 perm   1020 sec   (1285 perm/sec)   p_kst 8.030534e-04   p_cons 1.239046e-01   p_joint 5.618321e-04

Joint ci ratio: 1.439643e-01	ci left: 5.209470e-04	ci right 6.024825e-04	k: 740	n:1320000
Cons ci ratio: 9.071320e-03	ci left: 1.233724e-01	ci right 1.244974e-01	k: 163593	n:1320000
KS ci ratio: 1.205814e-01	ci left: 7.517534e-04	ci right 8.489434e-04	k: 1055	n:1320000
RPTN   1320000 perm   1033 sec   (1278 perm/sec)   p_kst 7.992424e-04   p_cons 1.239341e-01   p_joint 5.606061e-04

Joint ci ratio: 1.436739e-01	ci left: 5.192045e-04	ci right 6.002893e-04	k: 743	n:1330000
Cons ci ratio: 9.037789e-03	ci left: 1.233593e-01	ci right 1.244800e-01	k: 164812	n:1330000
KS ci ratio: 1.202970e-01	ci left: 7.497472e-04	ci right 8.464330e-04	k: 1060	n:1330000
RPTN   1330000 perm   1047 sec   (1271 perm/sec)   p_kst 7.969925e-04   p_cons 1.239188e-01   p_joint 5.586466e-04

Joint ci ratio: 1.432893e-01	ci left: 5.182077e-04	ci right 5.989018e-04	k: 747	n:1340000
Cons ci ratio: 9.004721e-03	ci left: 1.233441e-01	ci right 1.244605e-01	k: 166028	n:1340000
KS ci ratio: 1.199584e-01	ci left: 7.484951e-04	ci right 8.447284e-04	k: 1066	n:1340000
RPTN   1340000 perm   1060 sec   (1264 perm/sec)   p_kst 7.955224e-04   p_cons 1.239015e-01   p_joint 5.574627e-04

Joint ci ratio: 1.430030e-01	ci left: 5.165118e-04	ci right 5.967672e-04	k: 750	n:1350000
Cons ci ratio: 8.969350e-03	ci left: 1.233935e-01	ci right 1.245059e-01	k: 167331	n:1350000
KS ci ratio: 1.191788e-01	ci left: 7.530110e-04	ci right 8.491515e-04	k: 1080	n:1350000
RPTN   1350000 perm   1073 sec   (1258 perm/sec)   p_kst 8.000000e-04   p_cons 1.239489e-01   p_joint 5.555556e-04

Joint ci ratio: 1.425293e-01	ci left: 5.162590e-04	ci right 5.961870e-04	k: 755	n:1360000
Cons ci ratio: 8.935875e-03	ci left: 1.234062e-01	ci right 1.245146e-01	k: 168585	n:1360000
KS ci ratio: 1.187949e-01	ci left: 7.524680e-04	ci right 8.482079e-04	k: 1087	n:1360000
RPTN   1360000 perm   1087 sec   (1251 perm/sec)   p_kst 7.992647e-04   p_cons 1.239596e-01   p_joint 5.551471e-04

Joint ci ratio: 1.447497e-01	ci left: 4.963053e-04	ci right 5.744445e-04	k: 732	n:1370000
Cons ci ratio: 8.903101e-03	ci left: 1.234107e-01	ci right 1.245150e-01	k: 169828	n:1370000
KS ci ratio: 1.183605e-01	ci left: 7.526418e-04	ci right 8.480291e-04	k: 1095	n:1370000
RPTN   1370000 perm   1101 sec   (1244 perm/sec)   p_kst 7.992701e-04   p_cons 1.239620e-01   p_joint 5.343066e-04

Joint ci ratio: 1.444545e-01	ci left: 4.948041e-04	ci right 5.725344e-04	k: 735	n:1380000
Cons ci ratio: 8.869738e-03	ci left: 1.234382e-01	ci right 1.245387e-01	k: 171103	n:1380000
KS ci ratio: 1.180379e-01	ci left: 7.514071e-04	ci right 8.463603e-04	k: 1101	n:1380000
RPTN   1380000 perm   1115 sec   (1238 perm/sec)   p_kst 7.978261e-04   p_cons 1.239877e-01   p_joint 5.326087e-04

Joint ci ratio: 1.438693e-01	ci left: 4.954053e-04	ci right 5.728875e-04	k: 741	n:1390000
Cons ci ratio: 8.837684e-03	ci left: 1.234425e-01	ci right 1.245390e-01	k: 172346	n:1390000
KS ci ratio: 1.177712e-01	ci left: 7.494923e-04	ci right 8.439746e-04	k: 1106	n:1390000
RPTN   1390000 perm   1129 sec   (1232 perm/sec)   p_kst 7.956835e-04   p_cons 1.239899e-01   p_joint 5.330935e-04

Joint ci ratio: 1.486571e-01	ci left: 4.595228e-04	ci right 5.339975e-04	k: 694	n:1400000
Cons ci ratio: 8.805135e-03	ci left: 1.234673e-01	ci right 1.245600e-01	k: 173618	n:1400000
KS ci ratio: 1.170855e-01	ci left: 7.531518e-04	ci right 8.475045e-04	k: 1119	n:1400000
RPTN   1400000 perm   1143 sec   (1225 perm/sec)   p_kst 7.992857e-04   p_cons 1.240129e-01   p_joint 4.957143e-04

Joint ci ratio: 1.483374e-01	ci left: 4.583124e-04	ci right 5.324169e-04	k: 697	n:1410000
Cons ci ratio: 8.774117e-03	ci left: 1.234628e-01	ci right 1.245515e-01	k: 174849	n:1410000
KS ci ratio: 1.165662e-01	ci left: 7.546953e-04	ci right 8.487931e-04	k: 1129	n:1410000
RPTN   1410000 perm   1157 sec   (1219 perm/sec)   p_kst 8.007092e-04   p_cons 1.240064e-01   p_joint 4.943262e-04

Joint ci ratio: 1.478089e-01	ci left: 4.584755e-04	ci right 5.323190e-04	k: 702	n:1420000
Cons ci ratio: 8.741980e-03	ci left: 1.234942e-01	ci right 1.245792e-01	k: 176131	n:1420000
KS ci ratio: 1.161557e-01	ci left: 7.548504e-04	ci right 8.486134e-04	k: 1137	n:1420000
RPTN   1420000 perm   1171 sec   (1213 perm/sec)   p_kst 8.007042e-04   p_cons 1.240359e-01   p_joint 4.943662e-04

Joint ci ratio: 1.506221e-01	ci left: 4.377660e-04	ci right 5.097368e-04	k: 676	n:1430000
Cons ci ratio: 8.712015e-03	ci left: 1.234798e-01	ci right 1.245609e-01	k: 177348	n:1430000
KS ci ratio: 1.156487e-01	ci left: 7.563620e-04	ci right 8.498747e-04	k: 1147	n:1430000
RPTN   1430000 perm   1185 sec   (1207 perm/sec)   p_kst 8.020979e-04   p_cons 1.240196e-01   p_joint 4.727273e-04

Joint ci ratio: 1.502896e-01	ci left: 4.367308e-04	ci right 5.083587e-04	k: 679	n:1440000
Cons ci ratio: 8.680164e-03	ci left: 1.235203e-01	ci right 1.245979e-01	k: 178644	n:1440000
KS ci ratio: 1.152977e-01	ci left: 7.558302e-04	ci right 8.489742e-04	k: 1154	n:1440000
RPTN   1440000 perm   1199 sec   (1201 perm/sec)   p_kst 8.013889e-04   p_cons 1.240583e-01   p_joint 4.715278e-04

Joint ci ratio: 1.500692e-01	ci left: 4.350463e-04	ci right 5.062840e-04	k: 681	n:1450000
Cons ci ratio: 8.650087e-03	ci left: 1.235245e-01	ci right 1.245983e-01	k: 179888	n:1450000
KS ci ratio: 1.152481e-01	ci left: 7.512872e-04	ci right 8.438289e-04	k: 1155	n:1450000
RPTN   1450000 perm   1214 sec   (1194 perm/sec)   p_kst 7.965517e-04   p_cons 1.240607e-01   p_joint 4.696552e-04

Joint ci ratio: 1.496311e-01	ci left: 4.347035e-04	ci right 5.056586e-04	k: 685	n:1460000
Cons ci ratio: 8.620022e-03	ci left: 1.235362e-01	ci right 1.246064e-01	k: 181143	n:1460000
KS ci ratio: 1.150494e-01	ci left: 7.488022e-04	ci right 8.408679e-04	k: 1159	n:1460000
RPTN   1460000 perm   1228 sec   (1189 perm/sec)   p_kst 7.938356e-04   p_cons 1.240705e-01   p_joint 4.691781e-04

Joint ci ratio: 1.491968e-01	ci left: 4.343657e-04	ci right 5.050415e-04	k: 689	n:1470000
Cons ci ratio: 8.591182e-03	ci left: 1.235247e-01	ci right 1.245911e-01	k: 182364	n:1470000
KS ci ratio: 1.147039e-01	ci left: 7.483334e-04	ci right 8.400464e-04	k: 1166	n:1470000
RPTN   1470000 perm   1243 sec   (1183 perm/sec)   p_kst 7.931973e-04   p_cons 1.240571e-01   p_joint 4.687075e-04

Joint ci ratio: 1.483391e-01	ci left: 4.366351e-04	ci right 5.072355e-04	k: 697	n:1480000
Cons ci ratio: 8.562657e-03	ci left: 1.235126e-01	ci right 1.245754e-01	k: 183584	n:1480000
KS ci ratio: 1.142155e-01	ci left: 7.498404e-04	ci right 8.413205e-04	k: 1176	n:1480000
RPTN   1480000 perm   1258 sec   (1176 perm/sec)   p_kst 7.945946e-04   p_cons 1.240432e-01   p_joint 4.709459e-04

Joint ci ratio: 1.480215e-01	ci left: 4.356434e-04	ci right 5.059193e-04	k: 700	n:1490000
Cons ci ratio: 8.533649e-03	ci left: 1.235201e-01	ci right 1.245793e-01	k: 184833	n:1490000
KS ci ratio: 1.138774e-01	ci left: 7.493719e-04	ci right 8.405060e-04	k: 1183	n:1490000
RPTN   1490000 perm   1273 sec   (1171 perm/sec)   p_kst 7.939597e-04   p_cons 1.240490e-01   p_joint 4.697987e-04

Joint ci ratio: 1.476010e-01	ci left: 4.353071e-04	ci right 5.053117e-04	k: 704	n:1500000
Cons ci ratio: 8.502848e-03	ci left: 1.235808e-01	ci right 1.246367e-01	k: 186162	n:1500000
KS ci ratio: 1.135900e-01	ci left: 7.482623e-04	ci right 8.390164e-04	k: 1189	n:1500000
RPTN   1500000 perm   1288 sec   (1165 perm/sec)   p_kst 7.926667e-04   p_cons 1.241080e-01   p_joint 4.693333e-04

Joint ci ratio: 1.470803e-01	ci left: 4.356135e-04	ci right 5.053985e-04	k: 709	n:1510000
Cons ci ratio: 8.474725e-03	ci left: 1.235805e-01	ci right 1.246329e-01	k: 187400	n:1510000
KS ci ratio: 1.132574e-01	ci left: 7.478111e-04	ci right 8.382272e-04	k: 1196	n:1510000
RPTN   1510000 perm   1302 sec   (1159 perm/sec)   p_kst 7.920530e-04   p_cons 1.241060e-01   p_joint 4.695364e-04

Joint ci ratio: 1.466678e-01	ci left: 4.352825e-04	ci right 5.048018e-04	k: 713	n:1520000
Cons ci ratio: 8.446855e-03	ci left: 1.235809e-01	ci right 1.246298e-01	k: 188639	n:1520000
KS ci ratio: 1.128808e-01	ci left: 7.480056e-04	ci right 8.381245e-04	k: 1204	n:1520000
RPTN   1520000 perm   1318 sec   (1154 perm/sec)   p_kst 7.921053e-04   p_cons 1.241046e-01   p_joint 4.690789e-04

Joint ci ratio: 1.497419e-01	ci left: 4.141857e-04	ci right 4.818463e-04	k: 684	n:1530000
Cons ci ratio: 8.418701e-03	ci left: 1.235956e-01	ci right 1.246411e-01	k: 189900	n:1530000
KS ci ratio: 1.124153e-01	ci left: 7.494685e-04	ci right 8.393666e-04	k: 1214	n:1530000
RPTN   1530000 perm   1333 sec   (1148 perm/sec)   p_kst 7.934641e-04   p_cons 1.241176e-01   p_joint 4.470588e-04

Joint ci ratio: 1.490903e-01	ci left: 4.152467e-04	ci right 4.827591e-04	k: 690	n:1540000
Cons ci ratio: 8.390500e-03	ci left: 1.236186e-01	ci right 1.246608e-01	k: 191174	n:1540000
KS ci ratio: 1.119097e-01	ci left: 7.515444e-04	ci right 8.412592e-04	k: 1225	n:1540000
RPTN   1540000 perm   1348 sec   (1142 perm/sec)   p_kst 7.954545e-04   p_cons 1.241390e-01   p_joint 4.480519e-04

Joint ci ratio: 1.488751e-01	ci left: 4.138098e-04	ci right 4.809829e-04	k: 692	n:1550000
Cons ci ratio: 8.363028e-03	ci left: 1.236296e-01	ci right 1.246685e-01	k: 192430	n:1550000
KS ci ratio: 1.116823e-01	ci left: 7.498313e-04	ci right 8.391478e-04	k: 1230	n:1550000
RPTN   1550000 perm   1364 sec   (1137 perm/sec)   p_kst 7.935484e-04   p_cons 1.241484e-01   p_joint 4.464516e-04

Joint ci ratio: 1.483409e-01	ci left: 4.142432e-04	ci right 4.812239e-04	k: 697	n:1560000
Cons ci ratio: 8.335726e-03	ci left: 1.236432e-01	ci right 1.246787e-01	k: 193690	n:1560000
KS ci ratio: 1.111865e-01	ci left: 7.518794e-04	ci right 8.410163e-04	k: 1241	n:1560000
RPTN   1560000 perm   1379 sec   (1131 perm/sec)   p_kst 7.955128e-04   p_cons 1.241603e-01   p_joint 4.467949e-04

Joint ci ratio: 1.477074e-01	ci left: 4.152848e-04	ci right 4.821218e-04	k: 703	n:1570000
Cons ci ratio: 8.310222e-03	ci left: 1.236164e-01	ci right 1.246486e-01	k: 194887	n:1570000
KS ci ratio: 1.106973e-01	ci left: 7.539024e-04	ci right 8.428602e-04	k: 1252	n:1570000
RPTN   1570000 perm   1395 sec   (1126 perm/sec)   p_kst 7.974522e-04   p_cons 1.241318e-01   p_joint 4.477707e-04

Joint ci ratio: 1.205322e-01	ci left: 6.286585e-04	ci right 7.098987e-04	k: 1056	n:1580000
Cons ci ratio: 8.283504e-03	ci left: 1.236280e-01	ci right 1.246569e-01	k: 196144	n:1580000
KS ci ratio: 1.103018e-01	ci left: 7.546697e-04	ci right 8.433792e-04	k: 1261	n:1580000
RPTN   1580000 perm   1410 sec   (1121 perm/sec)   p_kst 7.981013e-04   p_cons 1.241418e-01   p_joint 6.683544e-04

Joint ci ratio: 1.215142e-01	ci left: 6.143363e-04	ci right 6.944189e-04	k: 1039	n:1590000
Cons ci ratio: 8.256589e-03	ci left: 1.236513e-01	ci right 1.246771e-01	k: 197420	n:1590000
KS ci ratio: 1.101276e-01	ci left: 7.523696e-04	ci right 8.406600e-04	k: 1265	n:1590000
RPTN   1590000 perm   1426 sec   (1115 perm/sec)   p_kst 7.955975e-04   p_cons 1.241635e-01   p_joint 6.534591e-04

Joint ci ratio: 1.212232e-01	ci left: 6.135268e-04	ci right 6.932986e-04	k: 1044	n:1600000
Cons ci ratio: 8.230714e-03	ci left: 1.236538e-01	ci right 1.246763e-01	k: 198663	n:1600000
KS ci ratio: 1.097813e-01	ci left: 7.525298e-04	ci right 8.405433e-04	k: 1273	n:1600000
RPTN   1600000 perm   1441 sec   (1110 perm/sec)   p_kst 7.956250e-04   p_cons 1.241644e-01   p_joint 6.525000e-04

Joint ci ratio: 1.213397e-01	ci left: 6.085114e-04	ci right 6.877126e-04	k: 1042	n:1610000
Cons ci ratio: 8.204777e-03	ci left: 1.236643e-01	ci right 1.246837e-01	k: 199919	n:1610000
KS ci ratio: 1.094809e-01	ci left: 7.520843e-04	ci right 8.397896e-04	k: 1280	n:1610000
RPTN   1610000 perm   1457 sec   (1105 perm/sec)   p_kst 7.950311e-04   p_cons 1.241733e-01   p_joint 6.472050e-04

Joint ci ratio: 1.210500e-01	ci left: 6.077480e-04	ci right 6.866475e-04	k: 1047	n:1620000
Cons ci ratio: 8.177877e-03	ci left: 1.237067e-01	ci right 1.247231e-01	k: 201227	n:1620000
KS ci ratio: 1.091407e-01	ci left: 7.522451e-04	ci right 8.396789e-04	k: 1288	n:1620000
RPTN   1620000 perm   1473 sec   (1100 perm/sec)   p_kst 7.950617e-04   p_cons 1.242142e-01   p_joint 6.462963e-04

Joint ci ratio: 1.208197e-01	ci left: 6.063992e-04	ci right 6.849631e-04	k: 1051	n:1630000
Cons ci ratio: 8.153055e-03	ci left: 1.237002e-01	ci right 1.247134e-01	k: 202456	n:1630000
KS ci ratio: 1.089719e-01	ci left: 7.500171e-04	ci right 8.370485e-04	k: 1292	n:1630000
RPTN   1630000 perm   1489 sec   (1095 perm/sec)   p_kst 7.926380e-04   p_cons 1.242061e-01   p_joint 6.447853e-04

Joint ci ratio: 1.239234e-01	ci left: 5.719641e-04	ci right 6.481100e-04	k: 999	n:1640000
Cons ci ratio: 8.128708e-03	ci left: 1.236871e-01	ci right 1.246972e-01	k: 203674	n:1640000
KS ci ratio: 1.086781e-01	ci left: 7.495959e-04	ci right 8.363289e-04	k: 1299	n:1640000
RPTN   1640000 perm   1505 sec   (1090 perm/sec)   p_kst 7.920732e-04   p_cons 1.241915e-01   p_joint 6.091463e-04

Joint ci ratio: 1.234919e-01	ci left: 5.726088e-04	ci right 6.485557e-04	k: 1006	n:1650000
Cons ci ratio: 8.103269e-03	ci left: 1.237092e-01	ci right 1.247163e-01	k: 204950	n:1650000
KS ci ratio: 1.081798e-01	ci left: 7.521285e-04	ci right 8.387301e-04	k: 1311	n:1650000
RPTN   1650000 perm   1520 sec   (1085 perm/sec)   p_kst 7.945455e-04   p_cons 1.242121e-01   p_joint 6.096970e-04

Joint ci ratio: 1.231257e-01	ci left: 5.726624e-04	ci right 6.483746e-04	k: 1012	n:1660000
Cons ci ratio: 8.077933e-03	ci left: 1.237347e-01	ci right 1.247389e-01	k: 206232	n:1660000
KS ci ratio: 1.079334e-01	ci left: 7.511143e-04	ci right 8.373896e-04	k: 1317	n:1660000
RPTN   1660000 perm   1537 sec   (1080 perm/sec)   p_kst 7.933735e-04   p_cons 1.242361e-01   p_joint 6.096386e-04

Joint ci ratio: 1.225822e-01	ci left: 5.744569e-04	ci right 6.500469e-04	k: 1021	n:1670000
Cons ci ratio: 8.055005e-03	ci left: 1.237013e-01	ci right 1.247024e-01	k: 207416	n:1670000
KS ci ratio: 1.076479e-01	ci left: 7.506952e-04	ci right 8.366799e-04	k: 1324	n:1670000
RPTN   1670000 perm   1553 sec   (1075 perm/sec)   p_kst 7.928144e-04   p_cons 1.242012e-01   p_joint 6.113772e-04

Joint ci ratio: 1.222835e-01	ci left: 5.739225e-04	ci right 6.492449e-04	k: 1026	n:1680000
Cons ci ratio: 8.032293e-03	ci left: 1.236678e-01	ci right 1.246657e-01	k: 208599	n:1680000
KS ci ratio: 1.072439e-01	ci left: 7.520193e-04	ci right 8.378119e-04	k: 1334	n:1680000
RPTN   1680000 perm   1570 sec   (1070 perm/sec)   p_kst 7.940476e-04   p_cons 1.241661e-01   p_joint 6.107143e-04

Joint ci ratio: 1.229443e-01	ci left: 5.642171e-04	ci right 6.386950e-04	k: 1015	n:1690000
Cons ci ratio: 8.008792e-03	ci left: 1.236612e-01	ci right 1.246561e-01	k: 209827	n:1690000
KS ci ratio: 1.068444e-01	ci left: 7.533282e-04	ci right 8.389300e-04	k: 1344	n:1690000
RPTN   1690000 perm   1586 sec   (1066 perm/sec)   p_kst 7.952663e-04   p_cons 1.241580e-01   p_joint 6.005917e-04

Joint ci ratio: 1.222840e-01	ci left: 5.671704e-04	ci right 6.416068e-04	k: 1026	n:1700000
Cons ci ratio: 7.984653e-03	ci left: 1.236776e-01	ci right 1.246696e-01	k: 211094	n:1700000
KS ci ratio: 1.064494e-01	ci left: 7.546223e-04	ci right 8.400342e-04	k: 1354	n:1700000
RPTN   1700000 perm   1602 sec   (1061 perm/sec)   p_kst 7.964706e-04   p_cons 1.241729e-01   p_joint 6.035294e-04

Joint ci ratio: 1.218693e-01	ci left: 5.678222e-04	ci right 6.420732e-04	k: 1033	n:1710000
Cons ci ratio: 7.961737e-03	ci left: 1.236663e-01	ci right 1.246554e-01	k: 212314	n:1710000
KS ci ratio: 1.062145e-01	ci left: 7.536248e-04	ci right 8.387238e-04	k: 1360	n:1710000
RPTN   1710000 perm   1619 sec   (1056 perm/sec)   p_kst 7.953216e-04   p_cons 1.241602e-01   p_joint 6.040936e-04

Joint ci ratio: 1.105688e-01	ci left: 6.898498e-04	ci right 7.711488e-04	k: 1255	n:1720000
Cons ci ratio: 7.938720e-03	ci left: 1.236633e-01	ci right 1.246495e-01	k: 213548	n:1720000
KS ci ratio: 1.057107e-01	ci left: 7.566011e-04	ci right 8.416058e-04	k: 1373	n:1720000
RPTN   1720000 perm   1635 sec   (1052 perm/sec)   p_kst 7.982558e-04   p_cons 1.241558e-01   p_joint 7.296512e-04

Joint ci ratio: 1.103057e-01	ci left: 6.892346e-04	ci right 7.702553e-04	k: 1261	n:1730000
Cons ci ratio: 7.915839e-03	ci left: 1.236621e-01	ci right 1.246455e-01	k: 214785	n:1730000
KS ci ratio: 1.055190e-01	ci left: 7.550415e-04	ci right 8.397076e-04	k: 1378	n:1730000
RPTN   1730000 perm   1652 sec   (1047 perm/sec)   p_kst 7.965318e-04   p_cons 1.241532e-01   p_joint 7.289017e-04

Joint ci ratio: 1.100879e-01	ci left: 6.880678e-04	ci right 7.687813e-04	k: 1266	n:1740000
Cons ci ratio: 7.892299e-03	ci left: 1.236845e-01	ci right 1.246651e-01	k: 216063	n:1740000
KS ci ratio: 1.051384e-01	ci left: 7.562979e-04	ci right 8.407801e-04	k: 1388	n:1740000
RPTN   1740000 perm   1669 sec   (1042 perm/sec)   p_kst 7.977011e-04   p_cons 1.241741e-01   p_joint 7.275862e-04

Joint ci ratio: 1.097850e-01	ci left: 6.880260e-04	ci right 7.684982e-04	k: 1273	n:1750000
Cons ci ratio: 7.870146e-03	ci left: 1.236740e-01	ci right 1.246518e-01	k: 217284	n:1750000
KS ci ratio: 1.047994e-01	ci left: 7.569841e-04	ci right 8.412535e-04	k: 1397	n:1750000
RPTN   1750000 perm   1686 sec   (1038 perm/sec)   p_kst 7.982857e-04   p_cons 1.241623e-01   p_joint 7.274286e-04

Joint ci ratio: 1.103063e-01	ci left: 6.774860e-04	ci right 7.571262e-04	k: 1261	n:1760000
Cons ci ratio: 7.847113e-03	ci left: 1.236932e-01	ci right 1.246682e-01	k: 218557	n:1760000
KS ci ratio: 1.046126e-01	ci left: 7.554495e-04	ci right 8.393889e-04	k: 1402	n:1760000
RPTN   1760000 perm   1703 sec   (1033 perm/sec)   p_kst 7.965909e-04   p_cons 1.241801e-01   p_joint 7.164773e-04

Joint ci ratio: 1.097855e-01	ci left: 6.802515e-04	ci right 7.598148e-04	k: 1273	n:1770000
Cons ci ratio: 7.824504e-03	ci left: 1.237060e-01	ci right 1.246783e-01	k: 219819	n:1770000
KS ci ratio: 1.041311e-01	ci left: 7.583344e-04	ci right 8.421829e-04	k: 1415	n:1770000
RPTN   1770000 perm   1720 sec   (1029 perm/sec)   p_kst 7.994350e-04   p_cons 1.241915e-01   p_joint 7.192090e-04

Joint ci ratio: 1.103944e-01	ci left: 6.687811e-04	ci right 7.474648e-04	k: 1259	n:1780000
Cons ci ratio: 7.802392e-03	ci left: 1.237102e-01	ci right 1.246798e-01	k: 221066	n:1780000
KS ci ratio: 1.039113e-01	ci left: 7.573572e-04	ci right 8.409100e-04	k: 1421	n:1780000
RPTN   1780000 perm   1738 sec   (1024 perm/sec)   p_kst 7.983146e-04   p_cons 1.241944e-01   p_joint 7.073034e-04

Joint ci ratio: 1.100021e-01	ci left: 6.699343e-04	ci right 7.484555e-04	k: 1268	n:1790000
Cons ci ratio: 7.780566e-03	ci left: 1.237116e-01	ci right 1.246784e-01	k: 222308	n:1790000
KS ci ratio: 1.036202e-01	ci left: 7.574794e-04	ci right 8.407974e-04	k: 1429	n:1790000
RPTN   1790000 perm   1755 sec   (1020 perm/sec)   p_kst 7.983240e-04   p_cons 1.241944e-01   p_joint 7.083799e-04

Joint ci ratio: 1.096570e-01	ci left: 6.705348e-04	ci right 7.488638e-04	k: 1276	n:1800000
Cons ci ratio: 7.757951e-03	ci left: 1.237401e-01	ci right 1.247044e-01	k: 223599	n:1800000
KS ci ratio: 1.032597e-01	ci left: 7.586831e-04	ci right 8.418255e-04	k: 1439	n:1800000
RPTN   1800000 perm   1773 sec   (1015 perm/sec)   p_kst 7.994444e-04   p_cons 1.242217e-01   p_joint 7.088889e-04

Joint ci ratio: 1.059833e-01	ci left: 7.152143e-04	ci right 7.957892e-04	k: 1366	n:1810000
Cons ci ratio: 7.482133e-03	ci left: 1.311878e-01	ci right 1.321736e-01	k: 238341	n:1810000
KS ci ratio: 1.028320e-01	ci left: 7.609505e-04	ci right 8.439751e-04	k: 1451	n:1810000
RPTN   1810000 perm   1790 sec   (1011 perm/sec)   p_kst 8.016575e-04   p_cons 1.316801e-01   p_joint 7.546961e-04

Joint ci ratio: 1.055977e-01	ci left: 7.166337e-04	ci right 7.970566e-04	k: 1376	n:1820000
Cons ci ratio: 7.462335e-03	ci left: 1.311651e-01	ci right 1.321481e-01	k: 239614	n:1820000
KS ci ratio: 1.025148e-01	ci left: 7.615875e-04	ci right 8.444098e-04	k: 1460	n:1820000
RPTN   1820000 perm   1808 sec   (1007 perm/sec)   p_kst 8.021978e-04   p_cons 1.316560e-01   p_joint 7.560440e-04

Joint ci ratio: 1.073682e-01	ci left: 6.887818e-04	ci right 7.674569e-04	k: 1331	n:1830000
Cons ci ratio: 7.442818e-03	ci left: 1.311389e-01	ci right 1.321191e-01	k: 240880	n:1830000
KS ci ratio: 1.022004e-01	ci left: 7.622180e-04	ci right 8.448395e-04	k: 1469	n:1830000
RPTN   1830000 perm   1826 sec   (1002 perm/sec)   p_kst 8.027322e-04   p_cons 1.316284e-01   p_joint 7.273224e-04

Joint ci ratio: 1.073684e-01	ci left: 6.850383e-04	ci right 7.632860e-04	k: 1331	n:1840000
Cons ci ratio: 7.423047e-03	ci left: 1.311254e-01	ci right 1.321029e-01	k: 242169	n:1840000
KS ci ratio: 1.017514e-01	ci left: 7.649606e-04	ci right 8.474932e-04	k: 1482	n:1840000
RPTN   1840000 perm   1844 sec   (998 perm/sec)   p_kst 8.054348e-04   p_cons 1.316136e-01   p_joint 7.233696e-04

Joint ci ratio: 1.125621e-01	ci left: 6.182524e-04	ci right 6.925144e-04	k: 1211	n:1850000
Cons ci ratio: 7.402942e-03	ci left: 1.311272e-01	ci right 1.321021e-01	k: 243486	n:1850000
KS ci ratio: 1.014780e-01	ci left: 7.650401e-04	ci right 8.473464e-04	k: 1490	n:1850000
RPTN   1850000 perm   1861 sec   (994 perm/sec)   p_kst 8.054054e-04   p_cons 1.316141e-01   p_joint 6.545946e-04

Joint ci ratio: 1.121464e-01	ci left: 6.196312e-04	ci right 6.937658e-04	k: 1220	n:1860000
Cons ci ratio: 7.383486e-03	ci left: 1.311139e-01	ci right 1.320861e-01	k: 244775	n:1860000
KS ci ratio: 1.010720e-01	ci left: 7.672152e-04	ci right 8.494057e-04	k: 1502	n:1860000
RPTN   1860000 perm   1879 sec   (990 perm/sec)   p_kst 8.075269e-04   p_cons 1.315995e-01   p_joint 6.559140e-04

Joint ci ratio: 1.120549e-01	ci left: 6.173572e-04	ci right 6.911554e-04	k: 1222	n:1870000
Cons ci ratio: 7.364218e-03	ci left: 1.310998e-01	ci right 1.320693e-01	k: 246062	n:1870000
KS ci ratio: 1.008709e-01	ci left: 7.662400e-04	ci right 8.481530e-04	k: 1508	n:1870000
RPTN   1870000 perm   1897 sec   (986 perm/sec)   p_kst 8.064171e-04   p_cons 1.315840e-01   p_joint 6.534759e-04

Joint ci ratio: 1.117810e-01	ci left: 6.171755e-04	ci right 6.907598e-04	k: 1228	n:1880000
Cons ci ratio: 7.345355e-03	ci left: 1.310778e-01	ci right 1.320446e-01	k: 247334	n:1880000
KS ci ratio: 1.005714e-01	ci left: 7.668309e-04	ci right 8.485493e-04	k: 1517	n:1880000
RPTN   1880000 perm   1915 sec   (982 perm/sec)   p_kst 8.069149e-04   p_cons 1.315606e-01   p_joint 6.531915e-04

Joint ci ratio: 1.114640e-01	ci left: 6.175103e-04	ci right 6.909120e-04	k: 1235	n:1890000
Cons ci ratio: 7.326519e-03	ci left: 1.310597e-01	ci right 1.320240e-01	k: 248613	n:1890000
KS ci ratio: 1.002089e-01	ci left: 7.684476e-04	ci right 8.500257e-04	k: 1528	n:1890000
RPTN   1890000 perm   1934 sec   (977 perm/sec)   p_kst 8.084656e-04   p_cons 1.315413e-01   p_joint 6.534392e-04

Joint ci ratio: 1.112842e-01	ci left: 6.163069e-04	ci right 6.894396e-04	k: 1239	n:1900000
Cons ci ratio: 7.307523e-03	ci left: 1.310513e-01	ci right 1.320130e-01	k: 249910	n:1900000
KS ci ratio: 1.001436e-01	ci left: 7.654293e-04	ci right 8.466310e-04	k: 1530	n:1900000
RPTN   1900000 perm   1952 sec   (973 perm/sec)   p_kst 8.052632e-04   p_cons 1.315316e-01   p_joint 6.521053e-04

Joint ci ratio: 1.109269e-01	ci left: 6.171522e-04	ci right 6.901348e-04	k: 1247	n:1910000
Cons ci ratio: 7.288207e-03	ci left: 1.310576e-01	ci right 1.320168e-01	k: 251235	n:1910000
KS ci ratio: 9.975335e-02	ci left: 7.675475e-04	ci right 8.486380e-04	k: 1542	n:1910000
RPTN   1910000 perm   1970 sec   (969 perm/sec)   p_kst 8.073298e-04   p_cons 1.315366e-01   p_joint 6.528796e-04

Joint ci ratio: 1.105290e-01	ci left: 6.184956e-04	ci right 6.913576e-04	k: 1256	n:1920000
Cons ci ratio: 7.269225e-03	ci left: 1.310582e-01	ci right 1.320148e-01	k: 252549	n:1920000
KS ci ratio: 9.956002e-02	ci left: 7.665970e-04	ci right 8.474209e-04	k: 1548	n:1920000
RPTN   1920000 perm   1989 sec   (966 perm/sec)   p_kst 8.062500e-04   p_cons 1.315359e-01   p_joint 6.541667e-04

Joint ci ratio: 1.109272e-01	ci left: 6.107567e-04	ci right 6.829832e-04	k: 1247	n:1930000
Cons ci ratio: 7.249832e-03	ci left: 1.310763e-01	ci right 1.320305e-01	k: 253897	n:1930000
KS ci ratio: 9.943183e-02	ci left: 7.646459e-04	ci right 8.451543e-04	k: 1552	n:1930000
RPTN   1930000 perm   2007 sec   (962 perm/sec)   p_kst 8.041451e-04   p_cons 1.315528e-01   p_joint 6.461140e-04

Joint ci ratio: 1.105734e-01	ci left: 6.116180e-04	ci right 6.837006e-04	k: 1255	n:1940000
Cons ci ratio: 7.231000e-03	ci left: 1.310814e-01	ci right 1.320331e-01	k: 255220	n:1940000
KS ci ratio: 9.914494e-02	ci left: 7.652284e-04	ci right 8.455521e-04	k: 1561	n:1940000
RPTN   1940000 perm   2025 sec   (958 perm/sec)   p_kst 8.046392e-04   p_cons 1.315567e-01   p_joint 6.469072e-04

Joint ci ratio: 1.102228e-01	ci left: 6.124708e-04	ci right 6.844102e-04	k: 1263	n:1950000
Cons ci ratio: 7.212752e-03	ci left: 1.310726e-01	ci right 1.320219e-01	k: 256516	n:1950000
KS ci ratio: 9.898671e-02	ci left: 7.638047e-04	ci right 8.438436e-04	k: 1566	n:1950000
RPTN   1950000 perm   2044 sec   (954 perm/sec)   p_kst 8.030769e-04   p_cons 1.315467e-01   p_joint 6.476923e-04

Joint ci ratio: 1.177317e-01	ci left: 5.320194e-04	ci right 5.990625e-04	k: 1107	n:1960000
Cons ci ratio: 7.696156e-03	ci left: 1.164413e-01	ci right 1.173414e-01	k: 229106	n:1960000
KS ci ratio: 9.879780e-02	ci left: 7.628933e-04	ci right 8.426752e-04	k: 1572	n:1960000
RPTN   1960000 perm   2062 sec   (950 perm/sec)   p_kst 8.020408e-04   p_cons 1.168908e-01   p_joint 5.647959e-04

Joint ci ratio: 1.171514e-01	ci left: 5.347385e-04	ci right 6.017692e-04	k: 1118	n:1970000
Cons ci ratio: 7.676162e-03	ci left: 1.164542e-01	ci right 1.173520e-01	k: 230298	n:1970000
KS ci ratio: 9.845408e-02	ci left: 7.644668e-04	ci right 8.441191e-04	k: 1583	n:1970000
RPTN   1970000 perm   2081 sec   (947 perm/sec)   p_kst 8.035533e-04   p_cons 1.169025e-01   p_joint 5.675127e-04

Joint ci ratio: 1.166313e-01	ci left: 5.369407e-04	ci right 6.039280e-04	k: 1128	n:1980000
Cons ci ratio: 7.656923e-03	ci left: 1.164508e-01	ci right 1.173463e-01	k: 231458	n:1980000
KS ci ratio: 9.814471e-02	ci left: 7.655322e-04	ci right 8.450305e-04	k: 1593	n:1980000
RPTN   1980000 perm   2100 sec   (943 perm/sec)   p_kst 8.045455e-04   p_cons 1.168980e-01   p_joint 5.696970e-04

Joint ci ratio: 1.164253e-01	ci left: 5.361940e-04	ci right 6.029618e-04	k: 1132	n:1990000
Cons ci ratio: 7.637214e-03	ci left: 1.164639e-01	ci right 1.173573e-01	k: 232651	n:1990000
KS ci ratio: 9.789935e-02	ci left: 7.656069e-04	ci right 8.449027e-04	k: 1601	n:1990000
RPTN   1990000 perm   2119 sec   (939 perm/sec)   p_kst 8.045226e-04   p_cons 1.169101e-01   p_joint 5.688442e-04

Joint ci ratio: 1.158640e-01	ci left: 5.388532e-04	ci right 6.056067e-04	k: 1143	n:2000000
Cons ci ratio: 7.617951e-03	ci left: 1.164690e-01	ci right 1.173601e-01	k: 233828	n:2000000
KS ci ratio: 9.750441e-02	ci left: 7.681200e-04	ci right 8.473369e-04	k: 1614	n:2000000
RPTN   2000000 perm   2138 sec   (935 perm/sec)   p_kst 8.070000e-04   p_cons 1.169140e-01   p_joint 5.715000e-04

Joint ci ratio: 1.166318e-01	ci left: 5.289265e-04	ci right 5.949143e-04	k: 1128	n:2010000
Cons ci ratio: 7.599200e-03	ci left: 1.164641e-01	ci right 1.173530e-01	k: 234985	n:2010000
KS ci ratio: 9.723384e-02	ci left: 7.686671e-04	ci right 8.477079e-04	k: 1623	n:2010000
RPTN   2010000 perm   2158 sec   (931 perm/sec)   p_kst 8.074627e-04   p_cons 1.169080e-01   p_joint 5.611940e-04

Joint ci ratio: 1.163744e-01	ci left: 5.287112e-04	ci right 5.945165e-04	k: 1133	n:2020000
Cons ci ratio: 7.580313e-03	ci left: 1.164666e-01	ci right 1.173533e-01	k: 236157	n:2020000
KS ci ratio: 9.705477e-02	ci left: 7.677600e-04	ci right 8.465538e-04	k: 1629	n:2020000
RPTN   2020000 perm   2177 sec   (928 perm/sec)   p_kst 8.064356e-04   p_cons 1.169094e-01   p_joint 5.608911e-04

Joint ci ratio: 1.158645e-01	ci left: 5.308898e-04	ci right 5.966570e-04	k: 1143	n:2030000
Cons ci ratio: 7.561748e-03	ci left: 1.164642e-01	ci right 1.173487e-01	k: 237319	n:2030000
KS ci ratio: 9.675837e-02	ci left: 7.687846e-04	ci right 8.474290e-04	k: 1639	n:2030000
RPTN   2030000 perm   2196 sec   (924 perm/sec)   p_kst 8.073892e-04   p_cons 1.169059e-01   p_joint 5.630542e-04

Joint ci ratio: 1.156122e-01	ci left: 5.306674e-04	ci right 5.962541e-04	k: 1148	n:2040000
Cons ci ratio: 7.542978e-03	ci left: 1.164711e-01	ci right 1.173535e-01	k: 238500	n:2040000
KS ci ratio: 9.649394e-02	ci left: 7.693213e-04	ci right 8.477933e-04	k: 1648	n:2040000
RPTN   2040000 perm   2216 sec   (921 perm/sec)   p_kst 8.078431e-04   p_cons 1.169118e-01   p_joint 5.627451e-04

Joint ci ratio: 1.152616e-01	ci left: 5.313948e-04	ci right 5.968587e-04	k: 1155	n:2050000
Cons ci ratio: 7.523955e-03	ci left: 1.164887e-01	ci right 1.173690e-01	k: 239703	n:2050000
KS ci ratio: 9.640640e-02	ci left: 7.669965e-04	ci right 8.451565e-04	k: 1651	n:2050000
RPTN   2050000 perm   2235 sec   (917 perm/sec)   p_kst 8.053659e-04   p_cons 1.169283e-01   p_joint 5.634146e-04

Joint ci ratio: 1.149141e-01	ci left: 5.321155e-04	ci right 5.974572e-04	k: 1162	n:2060000
Cons ci ratio: 7.505553e-03	ci left: 1.164930e-01	ci right 1.173711e-01	k: 240879	n:2060000
KS ci ratio: 9.623185e-02	ci left: 7.661157e-04	ci right 8.440365e-04	k: 1657	n:2060000
RPTN   2060000 perm   2255 sec   (914 perm/sec)   p_kst 8.043689e-04   p_cons 1.169316e-01   p_joint 5.640777e-04

Joint ci ratio: 1.143744e-01	ci left: 5.347066e-04	ci right 6.000372e-04	k: 1173	n:2070000
Cons ci ratio: 7.487284e-03	ci left: 1.164973e-01	ci right 1.173733e-01	k: 242055	n:2070000
KS ci ratio: 9.594291e-02	ci left: 7.671295e-04	ci right 8.449060e-04	k: 1667	n:2070000
RPTN   2070000 perm   2274 sec   (910 perm/sec)   p_kst 8.053140e-04   p_cons 1.169348e-01   p_joint 5.666667e-04

Joint ci ratio: 1.141316e-01	ci left: 5.344710e-04	ci right 5.996249e-04	k: 1178	n:2080000
Cons ci ratio: 7.469305e-03	ci left: 1.164972e-01	ci right 1.173711e-01	k: 243222	n:2080000
KS ci ratio: 9.559955e-02	ci left: 7.690725e-04	ci right 8.467513e-04	k: 1679	n:2080000
RPTN   2080000 perm   2294 sec   (907 perm/sec)   p_kst 8.072115e-04   p_cons 1.169337e-01   p_joint 5.663462e-04

Joint ci ratio: 1.139385e-01	ci left: 5.337730e-04	ci right 5.987243e-04	k: 1182	n:2090000
Cons ci ratio: 7.451455e-03	ci left: 1.164972e-01	ci right 1.173690e-01	k: 244389	n:2090000
KS ci ratio: 9.545768e-02	ci left: 7.677279e-04	ci right 8.451494e-04	k: 1684	n:2090000
RPTN   2090000 perm   2314 sec   (903 perm/sec)   p_kst 8.057416e-04   p_cons 1.169325e-01   p_joint 5.655502e-04

Joint ci ratio: 1.137944e-01	ci left: 5.326191e-04	ci right 5.973425e-04	k: 1185	n:2100000
Cons ci ratio: 7.434058e-03	ci left: 1.164881e-01	ci right 1.173577e-01	k: 245537	n:2100000
KS ci ratio: 9.523188e-02	ci left: 7.677907e-04	ci right 8.450252e-04	k: 1692	n:2100000
RPTN   2100000 perm   2334 sec   (900 perm/sec)   p_kst 8.057143e-04   p_cons 1.169224e-01   p_joint 5.642857e-04

Joint ci ratio: 1.135553e-01	ci left: 5.323971e-04	ci right 5.969485e-04	k: 1190	n:2110000
Cons ci ratio: 7.416782e-03	ci left: 1.164791e-01	ci right 1.173466e-01	k: 246685	n:2110000
KS ci ratio: 9.503563e-02	ci left: 7.673905e-04	ci right 8.444168e-04	k: 1699	n:2110000
RPTN   2110000 perm   2353 sec   (897 perm/sec)   p_kst 8.052133e-04   p_cons 1.169123e-01   p_joint 5.639810e-04

Joint ci ratio: 1.146196e-01	ci left: 5.198044e-04	ci right 5.834596e-04	k: 1168	n:2120000
Cons ci ratio: 7.398393e-03	ci left: 1.165045e-01	ci right 1.173701e-01	k: 247906	n:2120000
KS ci ratio: 9.475730e-02	ci left: 7.683758e-04	ci right 8.452625e-04	k: 1709	n:2120000
RPTN   2120000 perm   2373 sec   (893 perm/sec)   p_kst 8.061321e-04   p_cons 1.169368e-01   p_joint 5.509434e-04

Joint ci ratio: 1.143266e-01	ci left: 5.201002e-04	ci right 5.836179e-04	k: 1174	n:2130000
Cons ci ratio: 7.381615e-03	ci left: 1.164885e-01	ci right 1.173520e-01	k: 249039	n:2130000
KS ci ratio: 9.459154e-02	ci left: 7.675186e-04	ci right 8.441778e-04	k: 1715	n:2130000
RPTN   2130000 perm   2393 sec   (890 perm/sec)   p_kst 8.051643e-04   p_cons 1.169197e-01   p_joint 5.511737e-04

Joint ci ratio: 1.042489e-01	ci left: 6.258530e-04	ci right 6.951360e-04	k: 1412	n:2140000
Cons ci ratio: 7.365052e-03	ci left: 1.164698e-01	ci right 1.173312e-01	k: 250166	n:2140000
KS ci ratio: 9.426244e-02	ci left: 7.694071e-04	ci right 8.459728e-04	k: 1727	n:2140000
RPTN   2140000 perm   2413 sec   (887 perm/sec)   p_kst 8.070093e-04   p_cons 1.169000e-01   p_joint 6.598131e-04

Joint ci ratio: 1.040283e-01	ci left: 6.256600e-04	ci right 6.947662e-04	k: 1418	n:2150000
Cons ci ratio: 7.347159e-03	ci left: 1.164917e-01	ci right 1.173512e-01	k: 251380	n:2150000
KS ci ratio: 9.404500e-02	ci left: 7.694618e-04	ci right 8.458466e-04	k: 1735	n:2150000
RPTN   2150000 perm   2433 sec   (884 perm/sec)   p_kst 8.069767e-04   p_cons 1.169209e-01   p_joint 6.595349e-04

Joint ci ratio: 1.038091e-01	ci left: 6.254690e-04	ci right 6.943996e-04	k: 1424	n:2160000
Cons ci ratio: 7.330086e-03	ci left: 1.164940e-01	ci right 1.173515e-01	k: 252552	n:2160000
KS ci ratio: 9.382905e-02	ci left: 7.695162e-04	ci right 8.457213e-04	k: 1743	n:2160000
RPTN   2160000 perm   2454 sec   (880 perm/sec)   p_kst 8.069444e-04   p_cons 1.169222e-01   p_joint 6.592593e-04

Joint ci ratio: 1.046952e-01	ci left: 6.118149e-04	ci right 6.798517e-04	k: 1400	n:2170000
Cons ci ratio: 7.313491e-03	ci left: 1.164861e-01	ci right 1.173416e-01	k: 253702	n:2170000
KS ci ratio: 9.364134e-02	ci left: 7.691202e-04	ci right 8.451254e-04	k: 1750	n:2170000
RPTN   2170000 perm   2475 sec   (877 perm/sec)   p_kst 8.064516e-04   p_cons 1.169134e-01   p_joint 6.451613e-04

Joint ci ratio: 1.043604e-01	ci left: 6.130290e-04	ci right 6.809694e-04	k: 1409	n:2180000
Cons ci ratio: 7.296781e-03	ci left: 1.164848e-01	ci right 1.173383e-01	k: 254866	n:2180000
KS ci ratio: 9.340159e-02	ci left: 7.696240e-04	ci right 8.454736e-04	k: 1759	n:2180000
RPTN   2180000 perm   2495 sec   (874 perm/sec)   p_kst 8.068807e-04   p_cons 1.169110e-01   p_joint 6.463303e-04

Joint ci ratio: 1.038825e-01	ci left: 6.160113e-04	ci right 6.839505e-04	k: 1422	n:2190000
Cons ci ratio: 7.279284e-03	ci left: 1.165089e-01	ci right 1.173606e-01	k: 256086	n:2190000
KS ci ratio: 9.319003e-02	ci left: 7.696775e-04	ci right 8.453512e-04	k: 1767	n:2190000
RPTN   2190000 perm   2516 sec   (871 perm/sec)   p_kst 8.068493e-04   p_cons 1.169342e-01   p_joint 6.493151e-04

Joint ci ratio: 1.035917e-01	ci left: 6.167533e-04	ci right 6.845723e-04	k: 1430	n:2200000
Cons ci ratio: 7.261272e-03	ci left: 1.165510e-01	ci right 1.174009e-01	k: 257346	n:2200000
KS ci ratio: 9.300612e-02	ci left: 7.692867e-04	ci right 8.447646e-04	k: 1774	n:2200000
RPTN   2200000 perm   2537 sec   (867 perm/sec)   p_kst 8.063636e-04   p_cons 1.169755e-01   p_joint 6.500000e-04

Joint ci ratio: 1.037734e-01	ci left: 6.117587e-04	ci right 6.791537e-04	k: 1425	n:2210000
Cons ci ratio: 7.244155e-03	ci left: 1.165711e-01	ci right 1.174191e-01	k: 258558	n:2210000
KS ci ratio: 9.284937e-02	ci left: 7.684576e-04	ci right 8.437201e-04	k: 1780	n:2210000
RPTN   2210000 perm   2558 sec   (864 perm/sec)   p_kst 8.054299e-04   p_cons 1.169946e-01   p_joint 6.447964e-04

Joint ci ratio: 1.036282e-01	ci left: 6.107581e-04	ci right 6.779430e-04	k: 1429	n:2220000
Cons ci ratio: 7.227489e-03	ci left: 1.165815e-01	ci right 1.174276e-01	k: 259749	n:2220000
KS ci ratio: 9.269340e-02	ci left: 7.676360e-04	ci right 8.426850e-04	k: 1786	n:2220000
RPTN   2220000 perm   2579 sec   (861 perm/sec)   p_kst 8.045045e-04   p_cons 1.170041e-01   p_joint 6.436937e-04

Joint ci ratio: 1.033036e-01	ci left: 6.119507e-04	ci right 6.790432e-04	k: 1438	n:2230000
Cons ci ratio: 7.211157e-03	ci left: 1.165856e-01	ci right 1.174298e-01	k: 260926	n:2230000
KS ci ratio: 9.248661e-02	ci left: 7.676981e-04	ci right 8.425766e-04	k: 1794	n:2230000
RPTN   2230000 perm   2600 sec   (858 perm/sec)   p_kst 8.044843e-04   p_cons 1.170072e-01   p_joint 6.448430e-04

Joint ci ratio: 1.036285e-01	ci left: 6.053048e-04	ci right 6.718900e-04	k: 1429	n:2240000
Cons ci ratio: 7.194920e-03	ci left: 1.165901e-01	ci right 1.174324e-01	k: 262104	n:2240000
KS ci ratio: 9.217893e-02	ci left: 7.695044e-04	ci right 8.442959e-04	k: 1806	n:2240000
RPTN   2240000 perm   2621 sec   (855 perm/sec)   p_kst 8.062500e-04   p_cons 1.170107e-01   p_joint 6.379464e-04

Joint ci ratio: 1.034479e-01	ci left: 6.047792e-04	ci right 6.711836e-04	k: 1434	n:2250000
Cons ci ratio: 7.178390e-03	ci left: 1.166060e-01	ci right 1.174465e-01	k: 263308	n:2250000
KS ci ratio: 9.184903e-02	ci left: 7.717292e-04	ci right 8.464541e-04	k: 1819	n:2250000
RPTN   2250000 perm   2642 sec   (852 perm/sec)   p_kst 8.084444e-04   p_cons 1.170258e-01   p_joint 6.373333e-04

Joint ci ratio: 1.049216e-01	ci left: 5.848649e-04	ci right 6.500540e-04	k: 1394	n:2260000
Cons ci ratio: 7.162388e-03	ci left: 1.166099e-01	ci right 1.174486e-01	k: 264485	n:2260000
KS ci ratio: 9.164783e-02	ci left: 7.717731e-04	ci right 8.463298e-04	k: 1827	n:2260000
RPTN   2260000 perm   2663 sec   (849 perm/sec)   p_kst 8.084071e-04   p_cons 1.170288e-01   p_joint 6.168142e-04

Joint ci ratio: 1.046593e-01	ci left: 5.852913e-04	ci right 6.503549e-04	k: 1401	n:2270000
Cons ci ratio: 7.147436e-03	ci left: 1.165865e-01	ci right 1.174232e-01	k: 265600	n:2270000
KS ci ratio: 9.147288e-02	ci left: 7.713863e-04	ci right 8.457557e-04	k: 1834	n:2270000
RPTN   2270000 perm   2685 sec   (846 perm/sec)   p_kst 8.079295e-04   p_cons 1.170044e-01   p_joint 6.171806e-04

Joint ci ratio: 1.042141e-01	ci left: 5.878500e-04	ci right 6.529030e-04	k: 1413	n:2280000
Cons ci ratio: 7.130565e-03	ci left: 1.166216e-01	ci right 1.174566e-01	k: 266848	n:2280000
KS ci ratio: 9.134857e-02	ci left: 7.701458e-04	ci right 8.442894e-04	k: 1839	n:2280000
RPTN   2280000 perm   2706 sec   (843 perm/sec)   p_kst 8.065789e-04   p_cons 1.170386e-01   p_joint 6.197368e-04

Joint ci ratio: 1.043621e-01	ci left: 5.835817e-04	ci right 6.482597e-04	k: 1409	n:2290000
Cons ci ratio: 7.115677e-03	ci left: 1.166023e-01	ci right 1.174354e-01	k: 267972	n:2290000
KS ci ratio: 9.120004e-02	ci left: 7.693430e-04	ci right 8.432825e-04	k: 1845	n:2290000
RPTN   2290000 perm   2727 sec   (840 perm/sec)   p_kst 8.056769e-04   p_cons 1.170183e-01   p_joint 6.152838e-04

Joint ci ratio: 1.041407e-01	ci left: 5.835851e-04	ci right 6.481178e-04	k: 1415	n:2300000
Cons ci ratio: 7.099671e-03	ci left: 1.166183e-01	ci right 1.174496e-01	k: 269177	n:2300000
KS ci ratio: 9.110147e-02	ci left: 7.676975e-04	ci right 8.413948e-04	k: 1849	n:2300000
RPTN   2300000 perm   2748 sec   (837 perm/sec)   p_kst 8.039130e-04   p_cons 1.170335e-01   p_joint 6.152174e-04

Joint ci ratio: 1.039574e-01	ci left: 5.831669e-04	ci right 6.475329e-04	k: 1420	n:2310000
Cons ci ratio: 7.084144e-03	ci left: 1.166234e-01	ci right 1.174529e-01	k: 270357	n:2310000
KS ci ratio: 9.078296e-02	ci left: 7.698739e-04	ci right 8.435080e-04	k: 1862	n:2310000
RPTN   2310000 perm   2770 sec   (834 perm/sec)   p_kst 8.060606e-04   p_cons 1.170377e-01   p_joint 6.147186e-04

Joint ci ratio: 1.037386e-01	ci left: 5.831723e-04	ci right 6.473952e-04	k: 1426	n:2320000
Cons ci ratio: 7.068173e-03	ci left: 1.166443e-01	ci right 1.174721e-01	k: 271574	n:2320000
KS ci ratio: 9.056445e-02	ci left: 7.703468e-04	ci right 8.438395e-04	k: 1871	n:2320000
RPTN   2320000 perm   2792 sec   (831 perm/sec)   p_kst 8.064655e-04   p_cons 1.170578e-01   p_joint 6.146552e-04

Joint ci ratio: 1.033410e-01	ci left: 5.852682e-04	ci right 6.494599e-04	k: 1437	n:2330000
Cons ci ratio: 7.053568e-03	ci left: 1.166283e-01	ci right 1.174542e-01	k: 272705	n:2330000
KS ci ratio: 9.025153e-02	ci left: 7.724939e-04	ci right 8.459233e-04	k: 1884	n:2330000
RPTN   2330000 perm   2814 sec   (828 perm/sec)   p_kst 8.085837e-04   p_cons 1.170408e-01   p_joint 6.167382e-04

Joint ci ratio: 1.031618e-01	ci left: 5.848486e-04	ci right 6.488763e-04	k: 1442	n:2340000
Cons ci ratio: 7.038501e-03	ci left: 1.166285e-01	ci right 1.174527e-01	k: 273874	n:2340000
KS ci ratio: 9.003682e-02	ci left: 7.729521e-04	ci right 8.462411e-04	k: 1893	n:2340000
RPTN   2340000 perm   2836 sec   (825 perm/sec)   p_kst 8.089744e-04   p_cons 1.170402e-01   p_joint 6.162393e-04

Joint ci ratio: 1.033772e-01	ci left: 5.798726e-04	ci right 6.434961e-04	k: 1436	n:2350000
Cons ci ratio: 7.024079e-03	ci left: 1.166127e-01	ci right 1.174351e-01	k: 275005	n:2350000
KS ci ratio: 8.987092e-02	ci left: 7.725747e-04	ci right 8.456858e-04	k: 1900	n:2350000
RPTN   2350000 perm   2858 sec   (822 perm/sec)   p_kst 8.085106e-04   p_cons 1.170234e-01   p_joint 6.110638e-04

Joint ci ratio: 1.030906e-01	ci left: 5.807178e-04	ci right 6.442468e-04	k: 1444	n:2360000
Cons ci ratio: 7.008668e-03	ci left: 1.166287e-01	ci right 1.174494e-01	k: 276211	n:2360000
KS ci ratio: 8.970593e-02	ci left: 7.722005e-04	ci right 8.451350e-04	k: 1907	n:2360000
RPTN   2360000 perm   2880 sec   (819 perm/sec)   p_kst 8.080508e-04   p_cons 1.170386e-01   p_joint 6.118644e-04

Joint ci ratio: 1.028772e-01	ci left: 5.807340e-04	ci right 6.441253e-04	k: 1450	n:2370000
Cons ci ratio: 6.993715e-03	ci left: 1.166340e-01	ci right 1.174530e-01	k: 277392	n:2370000
KS ci ratio: 8.961213e-02	ci left: 7.705922e-04	ci right 8.432947e-04	k: 1911	n:2370000
RPTN   2370000 perm   2902 sec   (817 perm/sec)   p_kst 8.063291e-04   p_cons 1.170430e-01   p_joint 6.118143e-04

Joint ci ratio: 1.028065e-01	ci left: 5.791126e-04	ci right 6.422808e-04	k: 1452	n:2380000
Cons ci ratio: 6.979623e-03	ci left: 1.166167e-01	ci right 1.174339e-01	k: 278519	n:2380000
KS ci ratio: 8.937866e-02	ci left: 7.714621e-04	ci right 8.440471e-04	k: 1921	n:2380000
RPTN   2380000 perm   2925 sec   (814 perm/sec)   p_kst 8.071429e-04   p_cons 1.170248e-01   p_joint 6.100840e-04

Joint ci ratio: 1.025597e-01	ci left: 5.795432e-04	ci right 6.425975e-04	k: 1459	n:2390000
Cons ci ratio: 6.965531e-03	ci left: 1.166020e-01	ci right 1.174174e-01	k: 279652	n:2390000
KS ci ratio: 8.919323e-02	ci left: 7.715067e-04	ci right 8.439375e-04	k: 1929	n:2390000
RPTN   2390000 perm   2947 sec   (811 perm/sec)   p_kst 8.071130e-04   p_cons 1.170092e-01   p_joint 6.104603e-04

Joint ci ratio: 1.023846e-01	ci left: 5.791584e-04	ci right 6.420567e-04	k: 1464	n:2400000
Cons ci ratio: 6.950389e-03	ci left: 1.166211e-01	ci right 1.174349e-01	k: 280866	n:2400000
KS ci ratio: 8.907798e-02	ci left: 7.703290e-04	ci right 8.425509e-04	k: 1934	n:2400000
RPTN   2400000 perm   2970 sec   (808 perm/sec)   p_kst 8.058333e-04   p_cons 1.170275e-01   p_joint 6.100000e-04

Joint ci ratio: 1.005141e-01	ci left: 5.989981e-04	ci right 6.627926e-04	k: 1519	n:2410000
Cons ci ratio: 6.936265e-03	ci left: 1.166127e-01	ci right 1.174248e-01	k: 282014	n:2410000
KS ci ratio: 8.999034e-02	ci left: 7.513120e-04	ci right 8.225104e-04	k: 1895	n:2410000
RPTN   2410000 perm   2992 sec   (805 perm/sec)   p_kst 7.863071e-04   p_cons 1.170183e-01   p_joint 6.302905e-04

Joint ci ratio: 1.001196e-01	ci left: 6.013572e-04	ci right 6.651368e-04	k: 1531	n:2420000
Cons ci ratio: 6.922683e-03	ci left: 1.165908e-01	ci right 1.174011e-01	k: 283129	n:2420000
KS ci ratio: 8.984833e-02	ci left: 7.506310e-04	ci right 8.216467e-04	k: 1901	n:2420000
RPTN   2420000 perm   3015 sec   (803 perm/sec)   p_kst 7.855372e-04   p_cons 1.169955e-01   p_joint 6.326446e-04

Joint ci ratio: 1.016243e-01	ci left: 5.808308e-04	ci right 6.434145e-04	k: 1486	n:2430000
Cons ci ratio: 6.908409e-03	ci left: 1.165920e-01	ci right 1.174007e-01	k: 284300	n:2430000
KS ci ratio: 8.968346e-02	ci left: 7.503580e-04	ci right 8.212108e-04	k: 1908	n:2430000
RPTN   2430000 perm   3037 sec   (800 perm/sec)   p_kst 7.851852e-04   p_cons 1.169959e-01   p_joint 6.115226e-04

Joint ci ratio: 1.013520e-01	ci left: 5.816459e-04	ci right 6.441394e-04	k: 1494	n:2440000
Cons ci ratio: 6.894429e-03	ci left: 1.165871e-01	ci right 1.173941e-01	k: 285456	n:2440000
KS ci ratio: 8.958972e-02	ci left: 7.488853e-04	ci right 8.195213e-04	k: 1912	n:2440000
RPTN   2440000 perm   3060 sec   (797 perm/sec)   p_kst 7.836066e-04   p_cons 1.169902e-01   p_joint 6.122951e-04

Joint ci ratio: 1.029138e-01	ci left: 5.613733e-04	ci right 6.226743e-04	k: 1449	n:2450000
Cons ci ratio: 6.880683e-03	ci left: 1.165778e-01	ci right 1.173831e-01	k: 286601	n:2450000
KS ci ratio: 8.940297e-02	ci left: 7.490209e-04	ci right 8.195146e-04	k: 1920	n:2450000
RPTN   2450000 perm   3083 sec   (795 perm/sec)   p_kst 7.836735e-04   p_cons 1.169800e-01   p_joint 5.914286e-04

Joint ci ratio: 1.027015e-01	ci left: 5.614676e-04	ci right 6.226448e-04	k: 1455	n:2460000
Cons ci ratio: 6.867222e-03	ci left: 1.165625e-01	ci right 1.173661e-01	k: 287731	n:2460000
KS ci ratio: 8.919426e-02	ci left: 7.495529e-04	ci right 8.199235e-04	k: 1929	n:2460000
RPTN   2460000 perm   3106 sec   (792 perm/sec)   p_kst 7.841463e-04   p_cons 1.169638e-01   p_joint 5.914634e-04

Joint ci ratio: 1.026311e-01	ci left: 5.599834e-04	ci right 6.209545e-04	k: 1457	n:2470000
Cons ci ratio: 6.853006e-03	ci left: 1.165723e-01	ci right 1.173743e-01	k: 288923	n:2470000
KS ci ratio: 8.903296e-02	ci left: 7.492891e-04	ci right 8.195011e-04	k: 1936	n:2470000
RPTN   2470000 perm   3129 sec   (790 perm/sec)   p_kst 7.838057e-04   p_cons 1.169729e-01   p_joint 5.898785e-04

Joint ci ratio: 1.024556e-01	ci left: 5.596898e-04	ci right 6.205185e-04	k: 1462	n:2480000
Cons ci ratio: 6.839479e-03	ci left: 1.165640e-01	ci right 1.173643e-01	k: 290070	n:2480000
KS ci ratio: 8.889542e-02	ci left: 7.486333e-04	ci right 8.186699e-04	k: 1942	n:2480000
RPTN   2480000 perm   3152 sec   (787 perm/sec)   p_kst 7.830645e-04   p_cons 1.169637e-01   p_joint 5.895161e-04

Joint ci ratio: 1.020725e-01	ci left: 5.617467e-04	ci right 6.225570e-04	k: 1473	n:2490000
Cons ci ratio: 6.825992e-03	ci left: 1.165569e-01	ci right 1.173556e-01	k: 291220	n:2490000
KS ci ratio: 8.859943e-02	ci left: 7.507318e-04	ci right 8.207187e-04	k: 1955	n:2490000
RPTN   2490000 perm   3175 sec   (784 perm/sec)   p_kst 7.851406e-04   p_cons 1.169558e-01   p_joint 5.915663e-04

Joint ci ratio: 1.018998e-01	ci left: 5.614487e-04	ci right 6.221178e-04	k: 1478	n:2500000
Cons ci ratio: 6.811780e-03	ci left: 1.165743e-01	ci right 1.173714e-01	k: 292431	n:2500000
KS ci ratio: 8.837377e-02	ci left: 7.516404e-04	ci right 8.215243e-04	k: 1965	n:2500000
RPTN   2500000 perm   3198 sec   (782 perm/sec)   p_kst 7.860000e-04   p_cons 1.169724e-01   p_joint 5.912000e-04

Joint ci ratio: 1.018999e-01	ci left: 5.592119e-04	ci right 6.196393e-04	k: 1478	n:2510000
Cons ci ratio: 6.798351e-03	ci left: 1.165704e-01	ci right 1.173660e-01	k: 293589	n:2510000
KS ci ratio: 8.810522e-02	ci left: 7.533212e-04	ci right 8.231376e-04	k: 1977	n:2510000
RPTN   2510000 perm   3221 sec   (779 perm/sec)   p_kst 7.876494e-04   p_cons 1.169677e-01   p_joint 5.888446e-04

Joint ci ratio: 1.015571e-01	ci left: 5.608601e-04	ci right 6.212495e-04	k: 1488	n:2520000
Cons ci ratio: 6.784284e-03	ci left: 1.165883e-01	ci right 1.173824e-01	k: 294802	n:2520000
KS ci ratio: 8.794975e-02	ci left: 7.530485e-04	ci right 8.227101e-04	k: 1984	n:2520000
RPTN   2520000 perm   3245 sec   (777 perm/sec)   p_kst 7.873016e-04   p_cons 1.169849e-01   p_joint 5.904762e-04

Joint ci ratio: 1.016940e-01	ci left: 5.571023e-04	ci right 6.171729e-04	k: 1484	n:2530000
Cons ci ratio: 6.770757e-03	ci left: 1.165923e-01	ci right 1.173848e-01	k: 295980	n:2530000
KS ci ratio: 8.761919e-02	ci left: 7.558708e-04	ci right 8.255172e-04	k: 1999	n:2530000
RPTN   2530000 perm   3268 sec   (774 perm/sec)   p_kst 7.901186e-04   p_cons 1.169881e-01   p_joint 5.865613e-04

Joint ci ratio: 1.016941e-01	ci left: 5.549090e-04	ci right 6.147431e-04	k: 1484	n:2540000
Cons ci ratio: 6.757440e-03	ci left: 1.165924e-01	ci right 1.173833e-01	k: 297148	n:2540000
KS ci ratio: 8.746628e-02	ci left: 7.555905e-04	ci right 8.250834e-04	k: 2006	n:2540000
RPTN   2540000 perm   3292 sec   (772 perm/sec)   p_kst 7.897638e-04   p_cons 1.169874e-01   p_joint 5.842520e-04

Joint ci ratio: 1.018660e-01	ci left: 5.508219e-04	ci right 6.103217e-04	k: 1479	n:2550000
Cons ci ratio: 6.744522e-03	ci left: 1.165826e-01	ci right 1.173720e-01	k: 298291	n:2550000
KS ci ratio: 8.718429e-02	ci left: 7.576141e-04	ci right 8.270571e-04	k: 2019	n:2550000
RPTN   2550000 perm   3315 sec   (769 perm/sec)   p_kst 7.917647e-04   p_cons 1.169769e-01   p_joint 5.800000e-04

Joint ci ratio: 1.023167e-01	ci left: 5.437217e-04	ci right 6.027300e-04	k: 1466	n:2560000
Cons ci ratio: 6.730900e-03	ci left: 1.165968e-01	ci right 1.173846e-01	k: 299495	n:2560000
KS ci ratio: 8.692640e-02	ci left: 7.592402e-04	ci right 8.286159e-04	k: 2031	n:2560000
RPTN   2560000 perm   3339 sec   (767 perm/sec)   p_kst 7.933594e-04   p_cons 1.169902e-01   p_joint 5.726563e-04

Joint ci ratio: 1.024216e-01	ci left: 5.404686e-04	ci right 5.991876e-04	k: 1463	n:2570000
Cons ci ratio: 6.718310e-03	ci left: 1.165816e-01	ci right 1.173679e-01	k: 300624	n:2570000
KS ci ratio: 8.675579e-02	ci left: 7.593312e-04	ci right 8.285721e-04	k: 2039	n:2570000
RPTN   2570000 perm   3363 sec   (764 perm/sec)   p_kst 7.933852e-04   p_cons 1.169743e-01   p_joint 5.692607e-04

Joint ci ratio: 1.021776e-01	ci left: 5.410175e-04	ci right 5.996478e-04	k: 1470	n:2580000
Cons ci ratio: 6.704544e-03	ci left: 1.166049e-01	ci right 1.173897e-01	k: 301852	n:2580000
KS ci ratio: 8.654390e-02	ci left: 7.601800e-04	ci right 8.293205e-04	k: 2049	n:2580000
RPTN   2580000 perm   3387 sec   (762 perm/sec)   p_kst 7.941860e-04   p_cons 1.169969e-01   p_joint 5.697674e-04

Joint ci ratio: 1.019699e-01	ci left: 5.411861e-04	ci right 5.997082e-04	k: 1476	n:2590000
Cons ci ratio: 6.691901e-03	ci left: 1.165961e-01	ci right 1.173793e-01	k: 302997	n:2590000
KS ci ratio: 8.637552e-02	ci left: 7.602670e-04	ci right 8.292740e-04	k: 2057	n:2590000
RPTN   2590000 perm   3411 sec   (759 perm/sec)   p_kst 7.942085e-04   p_cons 1.169873e-01   p_joint 5.698842e-04

Joint ci ratio: 1.019700e-01	ci left: 5.391046e-04	ci right 5.974017e-04	k: 1476	n:2600000
Cons ci ratio: 6.678658e-03	ci left: 1.166080e-01	ci right 1.173898e-01	k: 304196	n:2600000
KS ci ratio: 8.614555e-02	ci left: 7.614824e-04	ci right 8.304065e-04	k: 2068	n:2600000
RPTN   2600000 perm   3436 sec   (757 perm/sec)   p_kst 7.953846e-04   p_cons 1.169985e-01   p_joint 5.676923e-04

Joint ci ratio: 1.017978e-01	ci left: 5.389060e-04	ci right 5.970773e-04	k: 1481	n:2610000
Cons ci ratio: 6.666073e-03	ci left: 1.166019e-01	ci right 1.173821e-01	k: 305348	n:2610000
KS ci ratio: 8.608325e-02	ci left: 7.596895e-04	ci right 8.283991e-04	k: 2071	n:2610000
RPTN   2610000 perm   3461 sec   (754 perm/sec)   p_kst 7.934866e-04   p_cons 1.169916e-01   p_joint 5.674330e-04

Joint ci ratio: 1.016608e-01	ci left: 5.383369e-04	ci right 5.963639e-04	k: 1485	n:2620000
Cons ci ratio: 6.654138e-03	ci left: 1.165779e-01	ci right 1.173566e-01	k: 306453	n:2620000
KS ci ratio: 8.597962e-02	ci left: 7.586572e-04	ci right 8.271867e-04	k: 2076	n:2620000
RPTN   2620000 perm   3485 sec   (752 perm/sec)   p_kst 7.923664e-04   p_cons 1.169668e-01   p_joint 5.667939e-04

Joint ci ratio: 1.021087e-01	ci left: 5.314729e-04	ci right 5.890276e-04	k: 1472	n:2630000
Cons ci ratio: 6.640420e-03	ci left: 1.166114e-01	ci right 1.173887e-01	k: 307709	n:2630000
KS ci ratio: 8.583511e-02	ci left: 7.583770e-04	ci right 8.267603e-04	k: 2083	n:2630000
RPTN   2630000 perm   3510 sec   (749 perm/sec)   p_kst 7.920152e-04   p_cons 1.169996e-01   p_joint 5.596958e-04

Joint ci ratio: 1.019014e-01	ci left: 5.316745e-04	ci right 5.891272e-04	k: 1478	n:2640000
Cons ci ratio: 6.628123e-03	ci left: 1.166031e-01	ci right 1.173788e-01	k: 308855	n:2640000
KS ci ratio: 8.569134e-02	ci left: 7.580990e-04	ci right 8.263370e-04	k: 2090	n:2640000
RPTN   2640000 perm   3534 sec   (747 perm/sec)   p_kst 7.916667e-04   p_cons 1.169905e-01   p_joint 5.598485e-04

Joint ci ratio: 1.016611e-01	ci left: 5.322425e-04	ci right 5.896128e-04	k: 1485	n:2650000
Cons ci ratio: 6.616052e-03	ci left: 1.165899e-01	ci right 1.173642e-01	k: 309988	n:2650000
KS ci ratio: 8.560955e-02	ci left: 7.567153e-04	ci right 8.247605e-04	k: 2094	n:2650000
RPTN   2650000 perm   3558 sec   (745 perm/sec)   p_kst 7.901887e-04   p_cons 1.169766e-01   p_joint 5.603774e-04

Joint ci ratio: 1.013546e-01	ci left: 5.335392e-04	ci right 5.908655e-04	k: 1494	n:2660000
Cons ci ratio: 6.603048e-03	ci left: 1.166080e-01	ci right 1.173808e-01	k: 311204	n:2660000
KS ci ratio: 8.538563e-02	ci left: 7.579175e-04	ci right 8.258836e-04	k: 2105	n:2660000
RPTN   2660000 perm   3583 sec   (742 perm/sec)   p_kst 7.913534e-04   p_cons 1.169940e-01   p_joint 5.616541e-04

Joint ci ratio: 1.012193e-01	ci left: 5.330010e-04	ci right 5.901886e-04	k: 1498	n:2670000
Cons ci ratio: 6.590539e-03	ci left: 1.166128e-01	ci right 1.173843e-01	k: 312385	n:2670000
KS ci ratio: 8.512323e-02	ci left: 7.598440e-04	ci right 8.277631e-04	k: 2118	n:2670000
RPTN   2670000 perm   3608 sec   (740 perm/sec)   p_kst 7.932584e-04   p_cons 1.169981e-01   p_joint 5.610487e-04

Joint ci ratio: 1.009502e-01	ci left: 5.339219e-04	ci right 5.910469e-04	k: 1506	n:2680000
Cons ci ratio: 6.578731e-03	ci left: 1.165979e-01	ci right 1.173679e-01	k: 313513	n:2680000
KS ci ratio: 8.498299e-02	ci left: 7.595651e-04	ci right 8.273419e-04	k: 2125	n:2680000
RPTN   2680000 perm   3633 sec   (738 perm/sec)   p_kst 7.929104e-04   p_cons 1.169825e-01   p_joint 5.619403e-04

Joint ci ratio: 1.007498e-01	ci left: 5.341112e-04	ci right 5.911364e-04	k: 1512	n:2690000
Cons ci ratio: 6.566761e-03	ci left: 1.165901e-01	ci right 1.173586e-01	k: 314660	n:2690000
KS ci ratio: 8.478380e-02	ci left: 7.603800e-04	ci right 8.280626e-04	k: 2135	n:2690000
RPTN   2690000 perm   3658 sec   (735 perm/sec)   p_kst 7.936803e-04   p_cons 1.169740e-01   p_joint 5.620818e-04

Joint ci ratio: 1.009839e-01	ci left: 5.296058e-04	ci right 5.862891e-04	k: 1505	n:2700000
Cons ci ratio: 6.554892e-03	ci left: 1.165813e-01	ci right 1.173484e-01	k: 315804	n:2700000
KS ci ratio: 8.460573e-02	ci left: 7.608266e-04	ci right 8.283996e-04	k: 2144	n:2700000
RPTN   2700000 perm   3683 sec   (733 perm/sec)   p_kst 7.940741e-04   p_cons 1.169644e-01   p_joint 5.574074e-04

Joint ci ratio: 1.007167e-01	ci left: 5.305291e-04	ci right 5.871521e-04	k: 1513	n:2710000
Cons ci ratio: 6.542946e-03	ci left: 1.165770e-01	ci right 1.173426e-01	k: 316960	n:2710000
KS ci ratio: 8.438957e-02	ci left: 7.619924e-04	ci right 8.294876e-04	k: 2155	n:2710000
RPTN   2710000 perm   3709 sec   (731 perm/sec)   p_kst 7.952030e-04   p_cons 1.169594e-01   p_joint 5.583026e-04

Joint ci ratio: 1.005509e-01	ci left: 5.303706e-04	ci right 5.868780e-04	k: 1518	n:2720000
Cons ci ratio: 6.531159e-03	ci left: 1.165698e-01	ci right 1.173340e-01	k: 318108	n:2720000
KS ci ratio: 8.429193e-02	ci left: 7.609904e-04	ci right 8.283150e-04	k: 2160	n:2720000
RPTN   2720000 perm   3734 sec   (728 perm/sec)   p_kst 7.941176e-04   p_cons 1.169515e-01   p_joint 5.580882e-04

Joint ci ratio: 1.004188e-01	ci left: 5.298562e-04	ci right 5.862302e-04	k: 1522	n:2730000
Cons ci ratio: 6.519018e-03	ci left: 1.165758e-01	ci right 1.173386e-01	k: 319292	n:2730000
KS ci ratio: 8.417519e-02	ci left: 7.603544e-04	ci right 8.275250e-04	k: 2166	n:2730000
RPTN   2730000 perm   3759 sec   (726 perm/sec)   p_kst 7.934066e-04   p_cons 1.169568e-01   p_joint 5.575092e-04

Joint ci ratio: 1.018336e-01	ci left: 5.129814e-04	ci right 5.683750e-04	k: 1480	n:2740000
Cons ci ratio: 6.507348e-03	ci left: 1.165690e-01	ci right 1.173304e-01	k: 320441	n:2740000
KS ci ratio: 8.279124e-02	ci left: 7.836659e-04	ci right 8.517028e-04	k: 2239	n:2740000
RPTN   2740000 perm   3785 sec   (724 perm/sec)   p_kst 8.171533e-04   p_cons 1.169493e-01   p_joint 5.401460e-04

Joint ci ratio: 1.024936e-01	ci left: 5.043834e-04	ci right 5.592227e-04	k: 1461	n:2750000
Cons ci ratio: 6.494791e-03	ci left: 1.165924e-01	ci right 1.173524e-01	k: 321673	n:2750000
KS ci ratio: 8.268061e-02	ci left: 7.829529e-04	ci right 8.508326e-04	k: 2245	n:2750000
RPTN   2750000 perm   3811 sec   (722 perm/sec)   p_kst 8.163636e-04   p_cons 1.169720e-01   p_joint 5.312727e-04

Joint ci ratio: 1.023188e-01	ci left: 5.043211e-04	ci right 5.590545e-04	k: 1466	n:2760000
Cons ci ratio: 6.482625e-03	ci left: 1.166055e-01	ci right 1.173642e-01	k: 322877	n:2760000
KS ci ratio: 8.249714e-02	ci left: 7.836645e-04	ci right 8.514479e-04	k: 2255	n:2760000
RPTN   2760000 perm   3836 sec   (720 perm/sec)   p_kst 8.170290e-04   p_cons 1.169844e-01   p_joint 5.311594e-04

Joint ci ratio: 9.205869e-02	ci left: 6.240320e-04	ci right 6.846010e-04	k: 1811	n:2770000
Cons ci ratio: 6.470911e-03	ci left: 1.166062e-01	ci right 1.173635e-01	k: 324047	n:2770000
KS ci ratio: 8.238768e-02	ci left: 7.829568e-04	ci right 8.505848e-04	k: 2261	n:2770000
RPTN   2770000 perm   3861 sec   (717 perm/sec)   p_kst 8.162455e-04   p_cons 1.169845e-01   p_joint 6.537906e-04

Outputting figure to mutsig2_images.part000000000150/RPTN.8_2363_2770000_0.00081625_0.11698_0.00065379.png
                gene_name: RPTN
               theta_stop: 0.092 
                    nperm: 2770000 
                     p_ks: 0.00082 
        ci_ks_bounds_left: 0.00078 
       ci_ks_bounds_right: 0.00085 
                   p_cons: 0.12 
      ci_cons_bounds_left: 0.12 
     ci_cons_bounds_right: 0.12 
                  p_joint: 0.00065 
     ci_joint_bounds_left: 0.00062 
    ci_joint_bounds_right: 0.00068 

Current progress: 33 percent done.
RPRD1A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.147127e-02	ci left: 3.575431e-01	ci right 3.765344e-01	k: 3670	n:10000
Cons ci ratio: 9.128017e-02	ci left: 1.485467e-01	ci right 1.628545e-01	k: 1556	n:10000
KS ci ratio: 4.149518e-02	ci left: 4.616756e-01	ci right 4.813410e-01	k: 4715	n:10000
RPRD1A   10000 perm   2 sec   (6310 perm/sec)   p_kst 4.715000e-01   p_cons 1.556000e-01   p_joint 3.670000e-01

Outputting figure to mutsig2_images.part000000000150/RPRD1A.3_967_10000_0.4715_0.1556_0.367.png
                gene_name: RPRD1A
               theta_stop: 0.091 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.37 
     ci_joint_bounds_left: 0.36 
    ci_joint_bounds_right: 0.38 

Current progress: 67 percent done.
RPUSD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.404922e-02	ci left: 2.636916e-01	ci right 2.812411e-01	k: 2724	n:10000
Cons ci ratio: 8.938381e-02	ci left: 1.540423e-01	ci right 1.685555e-01	k: 1612	n:10000
KS ci ratio: 8.519871e-02	ci left: 1.672051e-01	ci right 1.821849e-01	k: 1746	n:10000
RPUSD1   10000 perm   1 sec   (7265 perm/sec)   p_kst 1.746000e-01   p_cons 1.612000e-01   p_joint 2.724000e-01

Outputting figure to mutsig2_images.part000000000150/RPUSD1.2_959_10000_0.1746_0.1612_0.2724.png
                gene_name: RPUSD1
               theta_stop: 0.089 
                    nperm: 10000 
                     p_ks: 0.17 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.26 
    ci_joint_bounds_right: 0.28 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000150
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 150 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1728>
Subject: Job 8704335: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1728>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000151> was used as the working directory.
Started at Thu Nov 15 19:36:17 2012
Results reported at Thu Nov 15 19:39:31 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000151.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000151.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 151  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000151.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    121.70 sec.
    Max Memory :      5767 MB
    Max Swap   :      8434 MB

    Max Processes  :         7
    Max Threads    :        71

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
151
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 151
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 151: processing genes 13571 - 13660
Calculating significance of each gene.
Using projection method.
13571	RSPH10B	1
13572	RSPH10B2	1
13573	RSPH3	1
13574	RSPH4A	1
13575	RSPH6A	1
13576	RSPH9	1
13577	RSPO1	7.652837e-02
13578	RSPO2	1
13579	RSPO3	1
13580	RSPO4	1
13581	RSPRY1	8.399796e-02
13582	RSRC1	1
13583	RSRC2	5.246401e-02
13584	RSU1	1
13585	RTBDN	1
13586	RTCD1	1.701964e-01
13587	RTDR1	1
13588	RTEL1	4.863395e-01
13589	RTF1	1
13590	RTKN	2.214036e-01
13591	RTKN2	1
13592	RTL1	7.821430e-02
13593	RTN1	1
13594	RTN2	1.902593e-01
13595	RTN3	1
13596	RTN4	2.872859e-01
13597	RTN4IP1	1
13598	RTN4R	1
13599	RTN4RL1	1
13600	RTN4RL2	1
13601	RTP1	4.229759e-02
13602	RTP2	1
13603	RTP3	1
13604	RTP4	1
13605	RTTN	5.749431e-01
13606	RUFY1	1
13607	RUFY2	2.066958e-01
In gene RUFY3 the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 2016    n = 1	mu =   2.41e-07
13608	RUFY3	2.237186e-01
13609	RUFY4	1
13610	RUNDC1	1.009607e-01
13611	RUNDC2A	1.826465e-01
13612	RUNDC3A	1
13613	RUNDC3B	8.655602e-02
13614	RUNX1	1
13615	RUNX1T1	2.753174e-01
13616	RUNX2	1
13617	RUNX3	1
13618	RUSC1	1
13619	RUSC2	1
13620	RUVBL1	1
13621	RUVBL2	1
13622	RWDD1	1
13623	RWDD2A	1
13624	RWDD2B	1
13625	RWDD3	1
13626	RWDD4A	1
13627	RXFP1	8.112827e-02
13628	RXFP2	5.288719e-02
13629	RXFP3	1
13630	RXFP4	1
13631	RXRA	1
13632	RXRB	1
13633	RXRG	1
13634	RYBP	1
13635	RYK	1
13636	RYR1	5.361201e-01
13637	RYR2	8.400569e-01
13638	RYR3	1
13639	S100A1	1
13640	S100A10	1
13641	S100A11	1
13642	S100A12	1
13643	S100A13	1
13644	S100A14	1
13645	S100A16	1
13646	S100A2	1
13647	S100A3	1
13648	S100A4	1
13649	S100A5	1
13650	S100A6	2.566725e-02
13651	S100A7	4.904909e-02
13652	S100A7A	1
13653	S100A7L2	1
13654	S100A8	3.863364e-02
13655	S100A9	1
13656	S100B	1
13657	S100G	1
13658	S100P	1
13659	S100PBP	1
13660	S100Z	1
Done

Running MutSig 2:
Scatter job 151: processing genes 13571 - 13660
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
RYR1
Processing conservation and coverage...
64% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.400983e-01	ci left: 6.749259e-02	ci right 7.775805e-02	k: 725	n:10000
Cons ci ratio: 1.192588e-01	ci left: 9.165653e-02	ci right 1.033791e-01	k: 974	n:10000
KS ci ratio: 1.818499e-01	ci left: 4.035041e-02	ci right 4.851765e-02	k: 443	n:10000
RYR1   10000 perm   6 sec   (1717 perm/sec)   p_kst 4.430000e-02   p_cons 9.740000e-02   p_joint 7.250000e-02

Joint ci ratio: 1.519588e-01	ci left: 2.974850e-02	ci right 3.468873e-02	k: 643	n:20000
Cons ci ratio: 8.306188e-02	ci left: 9.602285e-02	ci right 1.043938e-01	k: 2003	n:20000
KS ci ratio: 1.281378e-01	ci left: 4.182901e-02	ci right 4.760429e-02	k: 893	n:20000
RYR1   20000 perm   16 sec   (1250 perm/sec)   p_kst 4.465000e-02   p_cons 1.001500e-01   p_joint 3.215000e-02

Joint ci ratio: 1.506624e-01	ci left: 2.040200e-02	ci right 2.375811e-02	k: 661	n:30000
Cons ci ratio: 6.585325e-02	ci left: 1.021440e-01	ci right 1.091326e-01	k: 3168	n:30000
KS ci ratio: 1.045841e-01	ci left: 4.238916e-02	ci right 4.709951e-02	k: 1341	n:30000
RYR1   30000 perm   19 sec   (1546 perm/sec)   p_kst 4.470000e-02   p_cons 1.056000e-01   p_joint 2.203333e-02

Joint ci ratio: 1.453853e-01	ci left: 1.655093e-02	ci right 1.916973e-02	k: 713	n:40000
Cons ci ratio: 5.734488e-02	ci left: 1.015925e-01	ci right 1.076151e-01	k: 4183	n:40000
KS ci ratio: 9.047581e-02	ci left: 4.279337e-02	ci right 4.687304e-02	k: 1792	n:40000
RYR1   40000 perm   23 sec   (1744 perm/sec)   p_kst 4.480000e-02   p_cons 1.045750e-01   p_joint 1.782500e-02

Joint ci ratio: 1.407316e-01	ci left: 1.420373e-02	ci right 1.637308e-02	k: 763	n:50000
Cons ci ratio: 5.126355e-02	ci left: 1.020096e-01	ci right 1.073964e-01	k: 5234	n:50000
KS ci ratio: 8.049742e-02	ci left: 4.345438e-02	ci right 4.711864e-02	k: 2263	n:50000
RYR1   50000 perm   26 sec   (1888 perm/sec)   p_kst 4.526000e-02   p_cons 1.046800e-01   p_joint 1.526000e-02

Joint ci ratio: 9.791674e-02	ci left: 2.474131e-02	ci right 2.730481e-02	k: 1560	n:60000
Cons ci ratio: 4.649998e-02	ci left: 1.034321e-01	ci right 1.083727e-01	k: 6353	n:60000
KS ci ratio: 7.385191e-02	ci left: 4.319123e-02	ci right 4.651964e-02	k: 2690	n:60000
RYR1   60000 perm   30 sec   (1996 perm/sec)   p_kst 4.483333e-02   p_cons 1.058833e-01   p_joint 2.600000e-02

Outputting figure to mutsig2_images.part000000000151/RYR1.4_15541_60000_0.044833_0.10588_0.026.png
                gene_name: RYR1
               theta_stop: 0.098 
                    nperm: 60000 
                     p_ks: 0.045 
        ci_ks_bounds_left: 0.043 
       ci_ks_bounds_right: 0.047 
                   p_cons: 0.11 
      ci_cons_bounds_left: 0.10 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.026 
     ci_joint_bounds_left: 0.025 
    ci_joint_bounds_right: 0.027 

Current progress: 50 percent done.
RXFP2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.417799e-02	ci left: 7.155281e-01	ci right 7.331411e-01	k: 7244	n:10000
Cons ci ratio: 3.613873e-02	ci left: 5.306718e-01	ci right 5.503046e-01	k: 5405	n:10000
KS ci ratio: 7.721745e-02	ci left: 1.969273e-01	ci right 2.128450e-01	k: 2048	n:10000
RXFP2   10000 perm   2 sec   (6388 perm/sec)   p_kst 2.048000e-01   p_cons 5.405000e-01   p_joint 7.244000e-01

Outputting figure to mutsig2_images.part000000000151/RXFP2.2_2337_10000_0.2048_0.5405_0.7244.png
                gene_name: RXFP2
               theta_stop: 0.077 
                    nperm: 10000 
                     p_ks: 0.20 
        ci_ks_bounds_left: 0.20 
       ci_ks_bounds_right: 0.21 
                   p_cons: 0.54 
      ci_cons_bounds_left: 0.53 
     ci_cons_bounds_right: 0.55 
                  p_joint: 0.72 
     ci_joint_bounds_left: 0.72 
    ci_joint_bounds_right: 0.73 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000151
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 151 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1535>
Subject: Job 8704339: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1535>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000152> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 19:39:51 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000152.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000152.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 152  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000152.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    270.03 sec.
    Max Memory :      5794 MB
    Max Swap   :      8426 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
152
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 152
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 152: processing genes 13661 - 13751
Calculating significance of each gene.
Using projection method.
13661	S1PR1	1.488391e-01
13662	S1PR2	1
13663	S1PR3	1
13664	S1PR4	1
13665	S1PR5	1.301611e-01
13666	SAA1	1
13667	SAA2	1
13668	SAA4	1
13669	SAAL1	6.868588e-02
13670	SAC3D1	1
13671	SACM1L	1
13672	SACS	2.964354e-01
13673	SAE1	1
13674	SAFB	1
13675	SAFB2	1
13676	SAG	1
13677	SAGE1	1.224457e-01
13678	SALL1	1
In gene SALL2 the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 3032    n = 1	mu =   1.67e-07
13679	SALL2	2.594892e-01
13680	SALL3	1.363801e-01
13681	SALL4	1
13682	SAMD1	8.465209e-04
13683	SAMD10	1
13684	SAMD11	1
13685	SAMD12	1
13686	SAMD13	1
13687	SAMD14	1
13688	SAMD3	1
13689	SAMD4A	1
13690	SAMD4B	1
13691	SAMD5	1
13692	SAMD7	1
13693	SAMD8	1
13694	SAMD9	1
In gene SAMD9L the following bins exceed PROBCAP:
    THCA-EL-A3CL-TP	categ 6	N = 4759    n = 1	mu =   1.03e-07
13695	SAMD9L	2.751361e-01
13696	SAMHD1	1
13697	SAMM50	1
13698	SAMSN1	2.675010e-02
13699	SAP130	1
13700	SAP18	5.559626e-03
13701	SAP30	1
13702	SAP30BP	1
13703	SAP30L	1
13704	SAPS1	1
13705	SAPS2	1
13706	SAPS3	2.401364e-01
13707	SAR1A	1
13708	SAR1B	1
13709	SARDH	1.983038e-01
13710	SARM1	1
13711	SARNP	1
13712	SARS	1
13713	SARS2	1
13714	SART1	1
13715	SART3	1
13716	SASH1	1
13717	SASH3	1
13718	SASS6	1
13719	SAT1	1
13720	SAT2	1
13721	SATB1	1
13722	SATB2	1
13723	SATL1	1
13724	SAV1	1
13725	SBDS	1
13726	SBF1	6.036277e-01
13727	SBF2	5.342887e-01
13728	SBK1	1
13729	SBK2	1
13730	SBNO1	1.720263e-01
13731	SBNO2	1
13732	SBSN	1.069377e-01
13733	SC4MOL	1
13734	SC5DL	1
13735	SC65	1
13736	SCAF1	1.986321e-01
13737	SCAI	1
13738	SCAMP1	1
13739	SCAMP2	1
13740	SCAMP3	1
13741	SCAMP4	1
13742	SCAMP5	1
13743	SCAND1	1
13744	SCAND3	1
13745	SCAP	4.084634e-01
13746	SCAPER	1
13747	SCARA3	1
13748	SCARA5	1
13749	SCARB1	1
13750	SCARB2	1
13751	SCARF1	1
Done

Running MutSig 2:
Scatter job 152: processing genes 13661 - 13751
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SACS
Processing conservation and coverage...
72% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.143955e-02	ci left: 5.988532e-01	ci right 6.180835e-01	k: 6085	n:10000
Cons ci ratio: 5.151560e-02	ci left: 3.571454e-01	ci right 3.761324e-01	k: 3666	n:10000
KS ci ratio: 2.228181e-02	ci left: 7.472560e-01	ci right 7.641948e-01	k: 7558	n:10000
SACS   10000 perm   4 sec   (2296 perm/sec)   p_kst 7.558000e-01   p_cons 3.666000e-01   p_joint 6.085000e-01

Outputting figure to mutsig2_images.part000000000152/SACS.3_13776_10000_0.7558_0.3666_0.6085.png
                gene_name: SACS
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.76 
        ci_ks_bounds_left: 0.75 
       ci_ks_bounds_right: 0.76 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.38 
                  p_joint: 0.61 
     ci_joint_bounds_left: 0.60 
    ci_joint_bounds_right: 0.62 

Current progress: 50 percent done.
SAMD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.238134e-01	ci left: 8.543267e-02	ci right 9.680682e-02	k: 910	n:10000
Cons ci ratio: 6.875699e-02	ci left: 2.367933e-01	ci right 2.537553e-01	k: 2452	n:10000
KS ci ratio: 2.816585e-01	ci left: 1.632191e-02	ci right 2.176339e-02	k: 189	n:10000
SAMD1   10000 perm   2 sec   (6281 perm/sec)   p_kst 1.890000e-02   p_cons 2.452000e-01   p_joint 9.100000e-02

Joint ci ratio: 1.087976e-01	ci left: 5.762467e-02	ci right 6.430368e-02	k: 1218	n:20000
Cons ci ratio: 4.859927e-02	ci left: 2.394485e-01	ci right 2.514256e-01	k: 4908	n:20000
KS ci ratio: 2.058973e-01	ci left: 1.596539e-02	ci right 1.967668e-02	k: 355	n:20000
SAMD1   20000 perm   4 sec   (5473 perm/sec)   p_kst 1.775000e-02   p_cons 2.454000e-01   p_joint 6.090000e-02

Joint ci ratio: 9.292039e-02	ci left: 5.339206e-02	ci right 5.862767e-02	k: 1679	n:30000
Cons ci ratio: 3.991294e-02	ci left: 2.384199e-01	ci right 2.481632e-01	k: 7298	n:30000
KS ci ratio: 1.700718e-01	ci left: 1.591865e-02	ci right 1.890919e-02	k: 521	n:30000
SAMD1   30000 perm   6 sec   (5189 perm/sec)   p_kst 1.736667e-02   p_cons 2.432667e-01   p_joint 5.596667e-02

Joint ci ratio: 8.865348e-02	ci left: 4.453039e-02	ci right 4.868575e-02	k: 1863	n:40000
Cons ci ratio: 3.427020e-02	ci left: 2.422329e-01	ci right 2.507040e-01	k: 9858	n:40000
KS ci ratio: 1.496006e-01	ci left: 1.561134e-02	ci right 1.815949e-02	k: 674	n:40000
SAMD1   40000 perm   8 sec   (4999 perm/sec)   p_kst 1.685000e-02   p_cons 2.464500e-01   p_joint 4.657500e-02

Joint ci ratio: 7.225000e-02	ci left: 5.358765e-02	ci right 5.762413e-02	k: 2779	n:50000
Cons ci ratio: 3.065181e-02	ci left: 2.426874e-01	ci right 2.502620e-01	k: 12323	n:50000
KS ci ratio: 1.331466e-01	ci left: 1.590436e-02	ci right 1.819220e-02	k: 851	n:50000
SAMD1   50000 perm   10 sec   (4860 perm/sec)   p_kst 1.702000e-02   p_cons 2.464600e-01   p_joint 5.558000e-02

Joint ci ratio: 6.493080e-02	ci left: 5.540420e-02	ci right 5.913876e-02	k: 3435	n:60000
Cons ci ratio: 2.798845e-02	ci left: 2.429229e-01	ci right 2.498350e-01	k: 14782	n:60000
KS ci ratio: 1.217519e-01	ci left: 1.594838e-02	ci right 1.803205e-02	k: 1018	n:60000
SAMD1   60000 perm   13 sec   (4733 perm/sec)   p_kst 1.696667e-02   p_cons 2.463667e-01   p_joint 5.725000e-02

Joint ci ratio: 5.991374e-02	ci left: 5.589936e-02	ci right 5.936600e-02	k: 4033	n:70000
Cons ci ratio: 2.596405e-02	ci left: 2.424432e-01	ci right 2.488350e-01	k: 17194	n:70000
KS ci ratio: 1.125201e-01	ci left: 1.608306e-02	ci right 1.801441e-02	k: 1192	n:70000
SAMD1   70000 perm   15 sec   (4617 perm/sec)   p_kst 1.702857e-02   p_cons 2.456286e-01   p_joint 5.761429e-02

Joint ci ratio: 5.581517e-02	ci left: 5.645175e-02	ci right 5.970539e-02	k: 4645	n:80000
Cons ci ratio: 2.428586e-02	ci left: 2.426701e-01	ci right 2.486484e-01	k: 19652	n:80000
KS ci ratio: 1.054273e-01	ci left: 1.609116e-02	ci right 1.789411e-02	k: 1358	n:80000
SAMD1   80000 perm   18 sec   (4513 perm/sec)   p_kst 1.697500e-02   p_cons 2.456500e-01   p_joint 5.806250e-02

Joint ci ratio: 5.256838e-02	ci left: 5.665719e-02	ci right 5.972692e-02	k: 5236	n:90000
Cons ci ratio: 2.290629e-02	ci left: 2.426909e-01	ci right 2.483255e-01	k: 22095	n:90000
KS ci ratio: 9.899931e-02	ci left: 1.627388e-02	ci right 1.797967e-02	k: 1540	n:90000
SAMD1   90000 perm   20 sec   (4411 perm/sec)   p_kst 1.711111e-02   p_cons 2.455000e-01   p_joint 5.817778e-02

Outputting figure to mutsig2_images.part000000000152/SAMD1.2_1318_90000_0.017111_0.2455_0.058178.png
                gene_name: SAMD1
               theta_stop: 0.099 
                    nperm: 90000 
                     p_ks: 0.017 
        ci_ks_bounds_left: 0.016 
       ci_ks_bounds_right: 0.018 
                   p_cons: 0.25 
      ci_cons_bounds_left: 0.24 
     ci_cons_bounds_right: 0.25 
                  p_joint: 0.058 
     ci_joint_bounds_left: 0.057 
    ci_joint_bounds_right: 0.060 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000152
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 152 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1706>
Subject: Job 8704342: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1706>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000153> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 22:37:44 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000153.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000153.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 153  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000153.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  11035.68 sec.
    Max Memory :      5835 MB
    Max Swap   :      8620 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
153
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 153
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 153: processing genes 13752 - 13841
Calculating significance of each gene.
Using projection method.
13752	SCARF2	1
13753	SCCPDH	1
13754	SCD	1
13755	SCD5	1
In gene SCEL the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 2185    n = 1	mu =   1.34e-07
13756	SCEL	1.449532e-01
13757	SCFD1	1
13758	SCFD2	1
13759	SCG2	1
13760	SCG3	1
13761	SCG5	1
13762	SCGB1A1	1
13763	SCGB1C1	1
13764	SCGB1D1	1
13765	SCGB1D2	1
13766	SCGB1D4	1
13767	SCGB2A1	1
13768	SCGB2A2	1
13769	SCGB3A2	1
13770	SCGBL	1
13771	SCGN	1
13772	SCHIP1	1
13773	SCIN	1
13774	SCLT1	1
13775	SCLY	1
13776	SCMH1	1.176430e-01
13777	SCML1	1
13778	SCML2	1
13779	SCML4	1
13780	SCN10A	4.633982e-01
13781	SCN11A	1
13782	SCN1A	5.664095e-01
13783	SCN1B	1.229635e-01
13784	SCN2A	3.276380e-01
13785	SCN2B	1
13786	SCN3A	5.892888e-01
13787	SCN3B	1
13788	SCN4A	1
13789	SCN4B	1
13790	SCN5A	1
13791	SCN7A	1
13792	SCN8A	1
In gene SCN9A the following bins exceed PROBCAP:
    THCA-BJ-A0ZE-TP	categ 6	N = 5703    n = 1	mu =   9.96e-08
13793	SCN9A	7.040787e-02
13794	SCNM1	1
13795	SCNN1A	1
13796	SCNN1B	1
13797	SCNN1D	1
13798	SCNN1G	1
13799	SCO1	1
13800	SCO2	1
13801	SCOC	1
13802	SCP2	1
13803	SCPEP1	1.319086e-01
13804	SCRG1	1
13805	SCRIB	1
13806	SCRN1	1
13807	SCRN2	1
13808	SCRN3	1
13809	SCRT1	1
13810	SCRT2	1
13811	SCTR	1
13812	SCUBE1	1.712444e-01
13813	SCUBE2	1
13814	SCUBE3	1
13815	SCYL1	1
13816	SCYL2	2.738278e-01
13817	SCYL3	1.534435e-01
13818	SDAD1	2.090404e-01
13819	SDC1	1
13820	SDC2	1
13821	SDC3	1.895896e-01
13822	SDC4	2.493736e-02
13823	SDCBP	1
13824	SDCBP2	1
13825	SDCCAG1	1
13826	SDCCAG3	1
13827	SDCCAG8	2.122678e-01
13828	SDF2	1
13829	SDF2L1	1
13830	SDF4	1
13831	SDHA	3.043270e-01
13832	SDHAF2	1
13833	SDHB	1
13834	SDHC	1
13835	SDHD	5.733028e-02
13836	SDK1	1
13837	SDK2	1
13838	SDPR	1
13839	SDR16C5	1
13840	SDR39U1	1
13841	SDR42E1	1
Done

Running MutSig 2:
Scatter job 153: processing genes 13752 - 13841
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SCN5A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.791669e-01	ci left: 8.397740e-04	ci right 2.472817e-03	k: 15	n:10000
Cons ci ratio: 6.465227e-02	ci left: 2.600302e-01	ci right 2.775047e-01	k: 2687	n:10000
KS ci ratio: 1.599773e+00	ci left: 1.623679e-04	ci right 1.166444e-03	k: 5	n:10000
SCN5A   10000 perm   2 sec   (4435 perm/sec)   p_kst 5.000000e-04   p_cons 2.687000e-01   p_joint 1.500000e-03

Joint ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
Cons ci ratio: 4.587388e-02	ci left: 2.612751e-01	ci right 2.735926e-01	k: 5348	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
SCN5A   20000 perm   7 sec   (2914 perm/sec)   p_kst 5.000000e-05   p_cons 2.674000e-01   p_joint 5.000000e-05

Joint ci ratio: 1.752902e+00	ci left: 3.633000e-05	ci right 3.413508e-04	k: 4	n:30000
Cons ci ratio: 3.683049e-02	ci left: 2.690247e-01	ci right 2.791524e-01	k: 8222	n:30000
KS ci ratio: 1.752902e+00	ci left: 3.633000e-05	ci right 3.413508e-04	k: 4	n:30000
SCN5A   30000 perm   10 sec   (3142 perm/sec)   p_kst 1.333333e-04   p_cons 2.740667e-01   p_joint 1.333333e-04

Joint ci ratio: 1.481473e+00	ci left: 5.504928e-05	ci right 3.264580e-04	k: 6	n:40000
Cons ci ratio: 3.187815e-02	ci left: 2.699317e-01	ci right 2.787011e-01	k: 10972	n:40000
KS ci ratio: 1.481473e+00	ci left: 5.504928e-05	ci right 3.264580e-04	k: 6	n:40000
SCN5A   40000 perm   12 sec   (3277 perm/sec)   p_kst 1.500000e-04   p_cons 2.743000e-01   p_joint 1.500000e-04

Joint ci ratio: 1.306536e+00	ci left: 6.907909e-05	ci right 3.152393e-04	k: 8	n:50000
Cons ci ratio: 2.863097e-02	ci left: 2.687599e-01	ci right 2.765865e-01	k: 13633	n:50000
KS ci ratio: 1.385805e+00	ci left: 5.628905e-05	ci right 2.884321e-04	k: 7	n:50000
SCN5A   50000 perm   15 sec   (3303 perm/sec)   p_kst 1.400000e-04   p_cons 2.726600e-01   p_joint 1.600000e-04

Joint ci ratio: 1.239499e+00	ci left: 6.859177e-05	ci right 2.847275e-04	k: 9	n:60000
Cons ci ratio: 2.609122e-02	ci left: 2.697866e-01	ci right 2.769353e-01	k: 16401	n:60000
KS ci ratio: 1.385825e+00	ci left: 4.690730e-05	ci right 2.403631e-04	k: 7	n:60000
SCN5A   60000 perm   18 sec   (3343 perm/sec)   p_kst 1.166667e-04   p_cons 2.733500e-01   p_joint 1.500000e-04

Joint ci ratio: 1.181823e+00	ci left: 6.850761e-05	ci right 2.627036e-04	k: 10	n:70000
Cons ci ratio: 2.409830e-02	ci left: 2.709971e-01	ci right 2.776216e-01	k: 19201	n:70000
KS ci ratio: 1.306573e+00	ci left: 4.934171e-05	ci right 2.251759e-04	k: 8	n:70000
SCN5A   70000 perm   21 sec   (3361 perm/sec)   p_kst 1.142857e-04   p_cons 2.743000e-01   p_joint 1.428571e-04

Joint ci ratio: 1.087117e+00	ci left: 7.750951e-05	ci right 2.620051e-04	k: 12	n:80000
Cons ci ratio: 2.254908e-02	ci left: 2.710857e-01	ci right 2.772806e-01	k: 21934	n:80000
KS ci ratio: 1.239528e+00	ci left: 5.144341e-05	ci right 2.135493e-04	k: 9	n:80000
SCN5A   80000 perm   24 sec   (3352 perm/sec)   p_kst 1.125000e-04   p_cons 2.741750e-01   p_joint 1.500000e-04

Joint ci ratio: 1.047577e+00	ci left: 7.691275e-05	ci right 2.469917e-04	k: 13	n:90000
Cons ci ratio: 2.130162e-02	ci left: 2.704788e-01	ci right 2.763136e-01	k: 24605	n:90000
KS ci ratio: 1.181846e+00	ci left: 5.328334e-05	ci right 2.043278e-04	k: 10	n:90000
SCN5A   90000 perm   27 sec   (3342 perm/sec)   p_kst 1.111111e-04   p_cons 2.733889e-01   p_joint 1.444444e-04

Joint ci ratio: 8.992197e-01	ci left: 1.066828e-04	ci right 2.844627e-04	k: 18	n:100000
Cons ci ratio: 2.079187e-02	ci left: 2.595058e-01	ci right 2.649680e-01	k: 26223	n:100000
KS ci ratio: 9.799167e-01	ci left: 8.395621e-05	ci right 2.473901e-04	k: 15	n:100000
SCN5A   100000 perm   30 sec   (3328 perm/sec)   p_kst 1.500000e-04   p_cons 2.622300e-01   p_joint 1.800000e-04

Joint ci ratio: 9.238731e-01	ci left: 9.003092e-05	ci right 2.474308e-04	k: 17	n:110000
Cons ci ratio: 1.928084e-02	ci left: 2.704957e-01	ci right 2.757709e-01	k: 30044	n:110000
KS ci ratio: 9.506619e-01	ci left: 8.314205e-05	ci right 2.361984e-04	k: 16	n:110000
SCN5A   110000 perm   33 sec   (3303 perm/sec)   p_kst 1.454545e-04   p_cons 2.731273e-01   p_joint 1.545455e-04

Joint ci ratio: 8.764619e-01	ci left: 9.532962e-05	ci right 2.472461e-04	k: 19	n:120000
Cons ci ratio: 1.846208e-02	ci left: 2.705638e-01	ci right 2.756138e-01	k: 32770	n:120000
KS ci ratio: 8.992347e-01	ci left: 8.890185e-05	ci right 2.370543e-04	k: 18	n:120000
SCN5A   120000 perm   37 sec   (3282 perm/sec)   p_kst 1.500000e-04   p_cons 2.730833e-01   p_joint 1.583333e-04

Joint ci ratio: 8.553417e-01	ci left: 9.397568e-05	ci right 2.375930e-04	k: 20	n:130000
Cons ci ratio: 1.774842e-02	ci left: 2.704261e-01	ci right 2.752763e-01	k: 35470	n:130000
KS ci ratio: 8.764678e-01	ci left: 8.799638e-05	ci right 2.282280e-04	k: 19	n:130000
SCN5A   130000 perm   40 sec   (3253 perm/sec)   p_kst 1.461538e-04   p_cons 2.728462e-01   p_joint 1.538462e-04

Joint ci ratio: 7.687011e-01	ci left: 1.155652e-04	ci right 2.635954e-04	k: 25	n:140000
Cons ci ratio: 1.709498e-02	ci left: 2.706960e-01	ci right 2.753705e-01	k: 38224	n:140000
KS ci ratio: 8.356782e-01	ci left: 9.285469e-05	ci right 2.292818e-04	k: 21	n:140000
SCN5A   140000 perm   43 sec   (3228 perm/sec)   p_kst 1.500000e-04   p_cons 2.730286e-01   p_joint 1.785714e-04

Joint ci ratio: 7.407388e-01	ci left: 1.186244e-04	ci right 2.618798e-04	k: 27	n:150000
Cons ci ratio: 1.653735e-02	ci left: 2.702479e-01	ci right 2.747609e-01	k: 40875	n:150000
KS ci ratio: 8.001000e-01	ci left: 9.720258e-05	ci right 2.300665e-04	k: 23	n:150000
SCN5A   150000 perm   47 sec   (3200 perm/sec)   p_kst 1.533333e-04   p_cons 2.725000e-01   p_joint 1.800000e-04

Joint ci ratio: 6.928932e-01	ci left: 1.316474e-04	ci right 2.750015e-04	k: 31	n:160000
Cons ci ratio: 1.601350e-02	ci left: 2.702882e-01	ci right 2.746576e-01	k: 43595	n:160000
KS ci ratio: 7.687104e-01	ci left: 1.011192e-04	ci right 2.306472e-04	k: 25	n:160000
SCN5A   160000 perm   50 sec   (3174 perm/sec)   p_kst 1.562500e-04   p_cons 2.724687e-01   p_joint 1.937500e-04

Joint ci ratio: 6.823162e-01	ci left: 1.287563e-04	ci right 2.657218e-04	k: 32	n:170000
Cons ci ratio: 1.553348e-02	ci left: 2.704020e-01	ci right 2.746410e-01	k: 46328	n:170000
KS ci ratio: 7.543422e-01	ci left: 9.990861e-05	ci right 2.240863e-04	k: 26	n:170000
SCN5A   170000 perm   54 sec   (3144 perm/sec)   p_kst 1.529412e-04   p_cons 2.725176e-01   p_joint 1.882353e-04

Joint ci ratio: 6.823200e-01	ci left: 1.216029e-04	ci right 2.509600e-04	k: 32	n:180000
Cons ci ratio: 1.507497e-02	ci left: 2.710093e-01	ci right 2.751313e-01	k: 49152	n:180000
KS ci ratio: 7.543457e-01	ci left: 9.435801e-05	ci right 2.116375e-04	k: 26	n:180000
SCN5A   180000 perm   58 sec   (3116 perm/sec)   p_kst 1.444444e-04   p_cons 2.730667e-01   p_joint 1.777778e-04

Joint ci ratio: 4.495637e-01	ci left: 3.104978e-04	ci right 4.947813e-04	k: 75	n:190000
Cons ci ratio: 1.467031e-02	ci left: 2.711342e-01	ci right 2.751464e-01	k: 51896	n:190000
KS ci ratio: 7.039935e-01	ci left: 1.065334e-04	ci right 2.253969e-04	k: 30	n:190000
SCN5A   190000 perm   62 sec   (3085 perm/sec)   p_kst 1.578947e-04   p_cons 2.731368e-01   p_joint 3.947368e-04

Joint ci ratio: 4.354663e-01	ci left: 3.171875e-04	ci right 4.978103e-04	k: 80	n:200000
Cons ci ratio: 1.431515e-02	ci left: 2.707341e-01	ci right 2.746425e-01	k: 54537	n:200000
KS ci ratio: 6.722156e-01	ci left: 1.135810e-04	ci right 2.317136e-04	k: 33	n:200000
SCN5A   200000 perm   65 sec   (3055 perm/sec)   p_kst 1.650000e-04   p_cons 2.726850e-01   p_joint 4.000000e-04

Joint ci ratio: 4.226169e-01	ci left: 3.233218e-04	ci right 5.004704e-04	k: 85	n:210000
Cons ci ratio: 1.397752e-02	ci left: 2.705727e-01	ci right 2.743860e-01	k: 57220	n:210000
KS ci ratio: 6.443857e-01	ci left: 1.200693e-04	ci right 2.373216e-04	k: 36	n:210000
SCN5A   210000 perm   69 sec   (3026 perm/sec)   p_kst 1.714286e-04   p_cons 2.724762e-01   p_joint 4.047619e-04

Joint ci ratio: 2.763685e-01	ci left: 7.875047e-04	ci right 1.044120e-03	k: 200	n:220000
Cons ci ratio: 1.366631e-02	ci left: 2.703227e-01	ci right 2.740469e-01	k: 59880	n:220000
KS ci ratio: 5.977346e-01	ci left: 1.375938e-04	ci right 2.580450e-04	k: 42	n:220000
SCN5A   220000 perm   74 sec   (2993 perm/sec)   p_kst 1.909091e-04   p_cons 2.721818e-01   p_joint 9.090909e-04

Joint ci ratio: 4.020996e-01	ci left: 3.302799e-04	ci right 5.001171e-04	k: 94	n:230000
Cons ci ratio: 1.337206e-02	ci left: 2.701821e-01	ci right 2.738236e-01	k: 62560	n:230000
KS ci ratio: 5.909044e-01	ci left: 1.353046e-04	ci right 2.518210e-04	k: 43	n:230000
SCN5A   230000 perm   78 sec   (2961 perm/sec)   p_kst 1.869565e-04   p_cons 2.720000e-01   p_joint 4.086957e-04

Joint ci ratio: 3.880545e-01	ci left: 3.427883e-04	ci right 5.113275e-04	k: 101	n:240000
Cons ci ratio: 1.308336e-02	ci left: 2.704366e-01	ci right 2.740022e-01	k: 65332	n:240000
KS ci ratio: 5.657455e-01	ci left: 1.438944e-04	ci right 2.604084e-04	k: 47	n:240000
SCN5A   240000 perm   82 sec   (2929 perm/sec)   p_kst 1.958333e-04   p_cons 2.722167e-01   p_joint 4.208333e-04

Joint ci ratio: 5.146605e-01	ci left: 1.726894e-04	ci right 2.953905e-04	k: 57	n:250000
Cons ci ratio: 1.282423e-02	ci left: 2.703122e-01	ci right 2.738051e-01	k: 68014	n:250000
KS ci ratio: 5.488527e-01	ci left: 1.484474e-04	ci right 2.636667e-04	k: 50	n:250000
SCN5A   250000 perm   86 sec   (2898 perm/sec)   p_kst 2.000000e-04   p_cons 2.720560e-01   p_joint 2.280000e-04

Joint ci ratio: 4.977802e-01	ci left: 1.794668e-04	ci right 3.013632e-04	k: 61	n:260000
Cons ci ratio: 1.257734e-02	ci left: 2.702787e-01	ci right 2.737034e-01	k: 70717	n:260000
KS ci ratio: 5.285158e-01	ci left: 1.560286e-04	ci right 2.709848e-04	k: 54	n:260000
SCN5A   260000 perm   91 sec   (2869 perm/sec)   p_kst 2.076923e-04   p_cons 2.719885e-01   p_joint 2.346154e-04

Joint ci ratio: 4.899410e-01	ci left: 1.793043e-04	ci right 2.985250e-04	k: 63	n:270000
Cons ci ratio: 1.234488e-02	ci left: 2.702260e-01	ci right 2.735863e-01	k: 73414	n:270000
KS ci ratio: 5.191609e-01	ci left: 1.566770e-04	ci right 2.693274e-04	k: 56	n:270000
SCN5A   270000 perm   95 sec   (2840 perm/sec)   p_kst 2.074074e-04   p_cons 2.719037e-01   p_joint 2.333333e-04

Joint ci ratio: 4.753112e-01	ci left: 1.854478e-04	ci right 3.038746e-04	k: 67	n:280000
Cons ci ratio: 1.211555e-02	ci left: 2.704807e-01	ci right 2.737812e-01	k: 76196	n:280000
KS ci ratio: 5.060147e-01	ci left: 1.604092e-04	ci right 2.717978e-04	k: 59	n:280000
SCN5A   280000 perm   100 sec   (2812 perm/sec)   p_kst 2.107143e-04   p_cons 2.721286e-01   p_joint 2.392857e-04

Joint ci ratio: 4.684723e-01	ci left: 1.851291e-04	ci right 3.011074e-04	k: 69	n:290000
Cons ci ratio: 1.190404e-02	ci left: 2.705359e-01	ci right 2.737790e-01	k: 78925	n:290000
KS ci ratio: 4.977864e-01	ci left: 1.609008e-04	ci right 2.701886e-04	k: 61	n:290000
SCN5A   290000 perm   104 sec   (2784 perm/sec)   p_kst 2.103448e-04   p_cons 2.721552e-01   p_joint 2.379310e-04

Joint ci ratio: 4.619202e-01	ci left: 1.848431e-04	ci right 2.985136e-04	k: 71	n:300000
Cons ci ratio: 1.170411e-02	ci left: 2.705579e-01	ci right 2.737465e-01	k: 81645	n:300000
KS ci ratio: 4.938209e-01	ci left: 1.584537e-04	ci right 2.649296e-04	k: 62	n:300000
SCN5A   300000 perm   109 sec   (2756 perm/sec)   p_kst 2.066667e-04   p_cons 2.721500e-01   p_joint 2.366667e-04

Joint ci ratio: 4.556356e-01	ci left: 1.845862e-04	ci right 2.960766e-04	k: 73	n:310000
Cons ci ratio: 1.151206e-02	ci left: 2.706434e-01	ci right 2.737802e-01	k: 84385	n:310000
KS ci ratio: 4.899486e-01	ci left: 1.561677e-04	ci right 2.600067e-04	k: 63	n:310000
SCN5A   310000 perm   114 sec   (2727 perm/sec)   p_kst 2.032258e-04   p_cons 2.722097e-01   p_joint 2.354839e-04

Joint ci ratio: 4.824681e-01	ci left: 1.567710e-04	ci right 2.588923e-04	k: 65	n:320000
Cons ci ratio: 1.132514e-02	ci left: 2.708643e-01	ci right 2.739524e-01	k: 87170	n:320000
KS ci ratio: 4.824681e-01	ci left: 1.567710e-04	ci right 2.588923e-04	k: 65	n:320000
SCN5A   320000 perm   119 sec   (2699 perm/sec)   p_kst 2.031250e-04   p_cons 2.724063e-01   p_joint 2.031250e-04

Joint ci ratio: 4.753201e-01	ci left: 1.573491e-04	ci right 2.578342e-04	k: 67	n:330000
Cons ci ratio: 1.114559e-02	ci left: 2.711235e-01	ci right 2.741653e-01	k: 89972	n:330000
KS ci ratio: 4.753201e-01	ci left: 1.573491e-04	ci right 2.578342e-04	k: 67	n:330000
SCN5A   330000 perm   123 sec   (2672 perm/sec)   p_kst 2.030303e-04   p_cons 2.726424e-01   p_joint 2.030303e-04

Joint ci ratio: 4.718640e-01	ci left: 1.553111e-04	ci right 2.535409e-04	k: 68	n:340000
Cons ci ratio: 1.098155e-02	ci left: 2.711066e-01	ci right 2.741031e-01	k: 92685	n:340000
KS ci ratio: 4.718640e-01	ci left: 1.553111e-04	ci right 2.535409e-04	k: 68	n:340000
SCN5A   340000 perm   128 sec   (2647 perm/sec)   p_kst 2.000000e-04   p_cons 2.726029e-01   p_joint 2.000000e-04

Joint ci ratio: 4.718654e-01	ci left: 1.508735e-04	ci right 2.462970e-04	k: 68	n:350000
Cons ci ratio: 1.082908e-02	ci left: 2.709256e-01	ci right 2.738782e-01	k: 95340	n:350000
KS ci ratio: 4.718654e-01	ci left: 1.508735e-04	ci right 2.462970e-04	k: 68	n:350000
SCN5A   350000 perm   134 sec   (2621 perm/sec)   p_kst 1.942857e-04   p_cons 2.724000e-01   p_joint 1.942857e-04

Joint ci ratio: 4.619296e-01	ci left: 1.540353e-04	ci right 2.487626e-04	k: 71	n:360000
Cons ci ratio: 1.067882e-02	ci left: 2.709018e-01	ci right 2.738130e-01	k: 98048	n:360000
KS ci ratio: 4.619296e-01	ci left: 1.540353e-04	ci right 2.487626e-04	k: 71	n:360000
SCN5A   360000 perm   139 sec   (2596 perm/sec)   p_kst 1.972222e-04   p_cons 2.723556e-01   p_joint 1.972222e-04

Joint ci ratio: 4.587554e-01	ci left: 1.522613e-04	ci right 2.450535e-04	k: 72	n:370000
Cons ci ratio: 1.053306e-02	ci left: 2.709390e-01	ci right 2.738105e-01	k: 100778	n:370000
KS ci ratio: 4.587554e-01	ci left: 1.522613e-04	ci right 2.450535e-04	k: 72	n:370000
SCN5A   370000 perm   144 sec   (2572 perm/sec)   p_kst 1.945946e-04   p_cons 2.723730e-01   p_joint 1.945946e-04

Joint ci ratio: 4.525973e-01	ci left: 1.529133e-04	ci right 2.444682e-04	k: 74	n:380000
Cons ci ratio: 1.039132e-02	ci left: 2.710427e-01	ci right 2.738765e-01	k: 103534	n:380000
KS ci ratio: 4.525973e-01	ci left: 1.529133e-04	ci right 2.444682e-04	k: 74	n:380000
SCN5A   380000 perm   149 sec   (2549 perm/sec)   p_kst 1.947368e-04   p_cons 2.724579e-01   p_joint 1.947368e-04

Joint ci ratio: 4.525985e-01	ci left: 1.489924e-04	ci right 2.381999e-04	k: 74	n:390000
Cons ci ratio: 1.025833e-02	ci left: 2.710185e-01	ci right 2.738156e-01	k: 106242	n:390000
KS ci ratio: 4.525985e-01	ci left: 1.489924e-04	ci right 2.381999e-04	k: 74	n:390000
SCN5A   390000 perm   154 sec   (2526 perm/sec)   p_kst 1.897436e-04   p_cons 2.724154e-01   p_joint 1.897436e-04

Joint ci ratio: 4.496116e-01	ci left: 1.474834e-04	ci right 2.350273e-04	k: 75	n:400000
Cons ci ratio: 1.012279e-02	ci left: 2.712903e-01	ci right 2.740530e-01	k: 109068	n:400000
KS ci ratio: 4.496116e-01	ci left: 1.474834e-04	ci right 2.350273e-04	k: 75	n:400000
SCN5A   400000 perm   160 sec   (2503 perm/sec)   p_kst 1.875000e-04   p_cons 2.726700e-01   p_joint 1.875000e-04

Joint ci ratio: 4.466830e-01	ci left: 1.460499e-04	ci right 2.320076e-04	k: 76	n:410000
Cons ci ratio: 1.000195e-02	ci left: 2.711740e-01	ci right 2.739023e-01	k: 111740	n:410000
KS ci ratio: 4.466830e-01	ci left: 1.460499e-04	ci right 2.320076e-04	k: 76	n:410000
SCN5A   410000 perm   165 sec   (2479 perm/sec)   p_kst 1.853659e-04   p_cons 2.725366e-01   p_joint 1.853659e-04

Joint ci ratio: 4.355130e-01	ci left: 1.510386e-04	ci right 2.370586e-04	k: 80	n:420000
Cons ci ratio: 9.879274e-03	ci left: 2.713060e-01	ci right 2.740019e-01	k: 114514	n:420000
KS ci ratio: 4.355130e-01	ci left: 1.510386e-04	ci right 2.370586e-04	k: 80	n:420000
SCN5A   420000 perm   171 sec   (2453 perm/sec)   p_kst 1.904762e-04   p_cons 2.726524e-01   p_joint 1.904762e-04

Joint ci ratio: 4.328498e-01	ci left: 1.495974e-04	ci right 2.341240e-04	k: 81	n:430000
Cons ci ratio: 9.764785e-03	ci left: 2.712787e-01	ci right 2.739430e-01	k: 117222	n:430000
KS ci ratio: 4.328498e-01	ci left: 1.495974e-04	ci right 2.341240e-04	k: 81	n:430000
SCN5A   430000 perm   177 sec   (2431 perm/sec)   p_kst 1.883721e-04   p_cons 2.726093e-01   p_joint 1.883721e-04

Joint ci ratio: 4.328508e-01	ci left: 1.461974e-04	ci right 2.288031e-04	k: 81	n:440000
Cons ci ratio: 9.655847e-03	ci left: 2.711848e-01	ci right 2.738182e-01	k: 119900	n:440000
KS ci ratio: 4.328508e-01	ci left: 1.461974e-04	ci right 2.288031e-04	k: 81	n:440000
SCN5A   440000 perm   183 sec   (2410 perm/sec)   p_kst 1.840909e-04   p_cons 2.725000e-01   p_joint 1.840909e-04

Joint ci ratio: 4.302357e-01	ci left: 1.449293e-04	ci right 2.261809e-04	k: 82	n:450000
Cons ci ratio: 9.543946e-03	ci left: 2.713659e-01	ci right 2.739704e-01	k: 122700	n:450000
KS ci ratio: 4.302357e-01	ci left: 1.449293e-04	ci right 2.261809e-04	k: 82	n:450000
SCN5A   450000 perm   188 sec   (2388 perm/sec)   p_kst 1.822222e-04   p_cons 2.726667e-01   p_joint 1.822222e-04

Joint ci ratio: 4.226645e-01	ci left: 1.476004e-04	ci right 2.284816e-04	k: 85	n:460000
Cons ci ratio: 9.440449e-03	ci left: 2.713461e-01	ci right 2.739220e-01	k: 125411	n:460000
KS ci ratio: 4.226645e-01	ci left: 1.476004e-04	ci right 2.284816e-04	k: 85	n:460000
SCN5A   460000 perm   194 sec   (2367 perm/sec)   p_kst 1.847826e-04   p_cons 2.726326e-01   p_joint 1.847826e-04

Joint ci ratio: 4.202288e-01	ci left: 1.463619e-04	ci right 2.259724e-04	k: 86	n:470000
Cons ci ratio: 9.338344e-03	ci left: 2.714080e-01	ci right 2.739565e-01	k: 128160	n:470000
KS ci ratio: 4.202288e-01	ci left: 1.463619e-04	ci right 2.259724e-04	k: 86	n:470000
SCN5A   470000 perm   200 sec   (2346 perm/sec)   p_kst 1.829787e-04   p_cons 2.726809e-01   p_joint 1.829787e-04

Joint ci ratio: 4.154802e-01	ci left: 1.470412e-04	ci right 2.258670e-04	k: 88	n:480000
Cons ci ratio: 9.241278e-03	ci left: 2.713905e-01	ci right 2.739122e-01	k: 130872	n:480000
KS ci ratio: 4.154802e-01	ci left: 1.470412e-04	ci right 2.258670e-04	k: 88	n:480000
SCN5A   480000 perm   206 sec   (2325 perm/sec)   p_kst 1.833333e-04   p_cons 2.726500e-01   p_joint 1.833333e-04

Joint ci ratio: 4.154810e-01	ci left: 1.440403e-04	ci right 2.212576e-04	k: 88	n:490000
Cons ci ratio: 9.150096e-03	ci left: 2.712475e-01	ci right 2.737429e-01	k: 133522	n:490000
KS ci ratio: 4.154810e-01	ci left: 1.440403e-04	ci right 2.212576e-04	k: 88	n:490000
SCN5A   490000 perm   213 sec   (2305 perm/sec)   p_kst 1.795918e-04   p_cons 2.724939e-01   p_joint 1.795918e-04

Joint ci ratio: 4.064469e-01	ci left: 1.483325e-04	ci right 2.256550e-04	k: 92	n:500000
Cons ci ratio: 9.060324e-03	ci left: 2.711643e-01	ci right 2.736343e-01	k: 136199	n:500000
KS ci ratio: 4.064469e-01	ci left: 1.483325e-04	ci right 2.256550e-04	k: 92	n:500000
SCN5A   500000 perm   219 sec   (2287 perm/sec)   p_kst 1.840000e-04   p_cons 2.723980e-01   p_joint 1.840000e-04

Joint ci ratio: 4.042795e-01	ci left: 1.471848e-04	ci right 2.233901e-04	k: 93	n:510000
Cons ci ratio: 8.972700e-03	ci left: 2.711041e-01	ci right 2.735495e-01	k: 138886	n:510000
KS ci ratio: 4.042795e-01	ci left: 1.471848e-04	ci right 2.233901e-04	k: 93	n:510000
SCN5A   510000 perm   225 sec   (2268 perm/sec)   p_kst 1.823529e-04   p_cons 2.723255e-01   p_joint 1.823529e-04

Joint ci ratio: 4.000460e-01	ci left: 1.478114e-04	ci right 2.233273e-04	k: 95	n:520000
Cons ci ratio: 8.885069e-03	ci left: 2.711576e-01	ci right 2.735795e-01	k: 141631	n:520000
KS ci ratio: 4.000460e-01	ci left: 1.478114e-04	ci right 2.233273e-04	k: 95	n:520000
SCN5A   520000 perm   231 sec   (2249 perm/sec)   p_kst 1.826923e-04   p_cons 2.723673e-01   p_joint 1.826923e-04

Joint ci ratio: 3.979789e-01	ci left: 1.467199e-04	ci right 2.211888e-04	k: 96	n:530000
Cons ci ratio: 8.799830e-03	ci left: 2.712149e-01	ci right 2.736140e-01	k: 144379	n:530000
KS ci ratio: 3.979789e-01	ci left: 1.467199e-04	ci right 2.211888e-04	k: 96	n:530000
SCN5A   530000 perm   238 sec   (2230 perm/sec)   p_kst 1.811321e-04   p_cons 2.724132e-01   p_joint 1.811321e-04

Joint ci ratio: 3.979796e-01	ci left: 1.440029e-04	ci right 2.170928e-04	k: 96	n:540000
Cons ci ratio: 8.718790e-03	ci left: 2.711888e-01	ci right 2.735654e-01	k: 147083	n:540000
KS ci ratio: 3.979796e-01	ci left: 1.440029e-04	ci right 2.170928e-04	k: 96	n:540000
SCN5A   540000 perm   244 sec   (2212 perm/sec)   p_kst 1.777778e-04   p_cons 2.723759e-01   p_joint 1.777778e-04

Joint ci ratio: 3.862126e-01	ci left: 1.512185e-04	ci right 2.251247e-04	k: 102	n:550000
Cons ci ratio: 8.636185e-03	ci left: 2.713363e-01	ci right 2.736916e-01	k: 149882	n:550000
KS ci ratio: 3.862126e-01	ci left: 1.512185e-04	ci right 2.251247e-04	k: 102	n:550000
SCN5A   550000 perm   251 sec   (2194 perm/sec)   p_kst 1.854545e-04   p_cons 2.725127e-01   p_joint 1.854545e-04

Joint ci ratio: 3.771655e-01	ci left: 1.565902e-04	ci right 2.308857e-04	k: 107	n:560000
Cons ci ratio: 8.556422e-03	ci left: 2.714536e-01	ci right 2.737880e-01	k: 152667	n:560000
KS ci ratio: 3.771655e-01	ci left: 1.565902e-04	ci right 2.308857e-04	k: 107	n:560000
SCN5A   560000 perm   257 sec   (2175 perm/sec)   p_kst 1.910714e-04   p_cons 2.726196e-01   p_joint 1.910714e-04

Joint ci ratio: 3.720334e-01	ci left: 1.586107e-04	ci right 2.325914e-04	k: 110	n:570000
Cons ci ratio: 8.479354e-03	ci left: 2.715424e-01	ci right 2.738564e-01	k: 155438	n:570000
KS ci ratio: 3.720334e-01	ci left: 1.586107e-04	ci right 2.325914e-04	k: 110	n:570000
SCN5A   570000 perm   264 sec   (2157 perm/sec)   p_kst 1.929825e-04   p_cons 2.726982e-01   p_joint 1.929825e-04

Joint ci ratio: 3.639262e-01	ci left: 1.636997e-04	ci right 2.379954e-04	k: 115	n:580000
Cons ci ratio: 8.408058e-03	ci left: 2.714526e-01	ci right 2.737463e-01	k: 158107	n:580000
KS ci ratio: 3.639262e-01	ci left: 1.636997e-04	ci right 2.379954e-04	k: 115	n:580000
SCN5A   580000 perm   271 sec   (2139 perm/sec)   p_kst 1.982759e-04   p_cons 2.725983e-01   p_joint 1.982759e-04

Joint ci ratio: 3.608289e-01	ci left: 1.640064e-04	ci right 2.376588e-04	k: 117	n:590000
Cons ci ratio: 8.335288e-03	ci left: 2.715199e-01	ci right 2.737942e-01	k: 160867	n:590000
KS ci ratio: 3.608289e-01	ci left: 1.640064e-04	ci right 2.376588e-04	k: 117	n:590000
SCN5A   590000 perm   278 sec   (2122 perm/sec)   p_kst 1.983051e-04   p_cons 2.726559e-01   p_joint 1.983051e-04

Joint ci ratio: 3.548637e-01	ci left: 1.673404e-04	ci right 2.409612e-04	k: 121	n:600000
Cons ci ratio: 8.266910e-03	ci left: 2.714635e-01	ci right 2.737187e-01	k: 163554	n:600000
KS ci ratio: 3.548637e-01	ci left: 1.673404e-04	ci right 2.409612e-04	k: 121	n:600000
SCN5A   600000 perm   285 sec   (2105 perm/sec)   p_kst 2.016667e-04   p_cons 2.725900e-01   p_joint 2.016667e-04

Joint ci ratio: 3.534186e-01	ci left: 1.660906e-04	ci right 2.387956e-04	k: 122	n:610000
Cons ci ratio: 8.199204e-03	ci left: 2.714566e-01	ci right 2.736931e-01	k: 166270	n:610000
KS ci ratio: 3.534186e-01	ci left: 1.660906e-04	ci right 2.387956e-04	k: 122	n:610000
SCN5A   610000 perm   292 sec   (2089 perm/sec)   p_kst 2.000000e-04   p_cons 2.725738e-01   p_joint 2.000000e-04

Joint ci ratio: 3.534191e-01	ci left: 1.634117e-04	ci right 2.349442e-04	k: 122	n:620000
Cons ci ratio: 8.132408e-03	ci left: 2.714854e-01	ci right 2.737038e-01	k: 169008	n:620000
KS ci ratio: 3.534191e-01	ci left: 1.634117e-04	ci right 2.349442e-04	k: 122	n:620000
SCN5A   620000 perm   299 sec   (2073 perm/sec)   p_kst 1.967742e-04   p_cons 2.725935e-01   p_joint 1.967742e-04

Joint ci ratio: 3.534197e-01	ci left: 1.608178e-04	ci right 2.312150e-04	k: 122	n:630000
Cons ci ratio: 8.068445e-03	ci left: 2.714531e-01	ci right 2.736537e-01	k: 171708	n:630000
KS ci ratio: 3.534197e-01	ci left: 1.608178e-04	ci right 2.312150e-04	k: 122	n:630000
SCN5A   630000 perm   306 sec   (2058 perm/sec)   p_kst 1.936508e-04   p_cons 2.725524e-01   p_joint 1.936508e-04

Joint ci ratio: 3.464474e-01	ci left: 1.654310e-04	ci right 2.360985e-04	k: 127	n:640000
Cons ci ratio: 8.005463e-03	ci left: 2.714469e-01	ci right 2.736302e-01	k: 174424	n:640000
KS ci ratio: 3.464474e-01	ci left: 1.654310e-04	ci right 2.360985e-04	k: 127	n:640000
SCN5A   640000 perm   313 sec   (2042 perm/sec)   p_kst 1.984375e-04   p_cons 2.725375e-01   p_joint 1.984375e-04

Joint ci ratio: 3.437721e-01	ci left: 1.656962e-04	ci right 2.358088e-04	k: 129	n:650000
Cons ci ratio: 7.943563e-03	ci left: 2.714593e-01	ci right 2.736258e-01	k: 177152	n:650000
KS ci ratio: 3.437721e-01	ci left: 1.656962e-04	ci right 2.358088e-04	k: 129	n:650000
SCN5A   650000 perm   321 sec   (2027 perm/sec)   p_kst 1.984615e-04   p_cons 2.725415e-01   p_joint 1.984615e-04

Joint ci ratio: 3.411578e-01	ci left: 1.659553e-04	ci right 2.355259e-04	k: 131	n:660000
Cons ci ratio: 7.882024e-03	ci left: 2.715244e-01	ci right 2.736745e-01	k: 179915	n:660000
KS ci ratio: 3.411578e-01	ci left: 1.659553e-04	ci right 2.355259e-04	k: 131	n:660000
SCN5A   660000 perm   328 sec   (2012 perm/sec)   p_kst 1.984848e-04   p_cons 2.725985e-01   p_joint 1.984848e-04

Joint ci ratio: 3.411583e-01	ci left: 1.634783e-04	ci right 2.320106e-04	k: 131	n:670000
Cons ci ratio: 7.820391e-03	ci left: 2.716637e-01	ci right 2.737980e-01	k: 182729	n:670000
KS ci ratio: 3.411583e-01	ci left: 1.634783e-04	ci right 2.320106e-04	k: 131	n:670000
SCN5A   670000 perm   336 sec   (1997 perm/sec)   p_kst 1.955224e-04   p_cons 2.727299e-01   p_joint 1.955224e-04

Joint ci ratio: 3.386028e-01	ci left: 1.637644e-04	ci right 2.317900e-04	k: 133	n:680000
Cons ci ratio: 7.985686e-03	ci left: 2.605953e-01	ci right 2.626861e-01	k: 177915	n:680000
KS ci ratio: 3.386028e-01	ci left: 1.637644e-04	ci right 2.317900e-04	k: 133	n:680000
SCN5A   680000 perm   343 sec   (1983 perm/sec)   p_kst 1.955882e-04   p_cons 2.616397e-01   p_joint 1.955882e-04

Joint ci ratio: 3.373466e-01	ci left: 1.627173e-04	ci right 2.300025e-04	k: 134	n:690000
Cons ci ratio: 7.928303e-03	ci left: 2.605690e-01	ci right 2.626446e-01	k: 180508	n:690000
KS ci ratio: 3.373466e-01	ci left: 1.627173e-04	ci right 2.300025e-04	k: 134	n:690000
SCN5A   690000 perm   351 sec   (1968 perm/sec)   p_kst 1.942029e-04   p_cons 2.616058e-01   p_joint 1.942029e-04

Joint ci ratio: 3.361043e-01	ci left: 1.617005e-04	ci right 2.282657e-04	k: 135	n:700000
Cons ci ratio: 7.870569e-03	ci left: 2.606206e-01	ci right 2.626814e-01	k: 183155	n:700000
KS ci ratio: 3.361043e-01	ci left: 1.617005e-04	ci right 2.282657e-04	k: 135	n:700000
SCN5A   700000 perm   358 sec   (1954 perm/sec)   p_kst 1.928571e-04   p_cons 2.616500e-01   p_joint 1.928571e-04

Joint ci ratio: 3.361048e-01	ci left: 1.594230e-04	ci right 2.250508e-04	k: 135	n:710000
Cons ci ratio: 7.815844e-03	ci left: 2.605836e-01	ci right 2.626296e-01	k: 185740	n:710000
KS ci ratio: 3.361048e-01	ci left: 1.594230e-04	ci right 2.250508e-04	k: 135	n:710000
SCN5A   710000 perm   366 sec   (1940 perm/sec)   p_kst 1.901408e-04   p_cons 2.616056e-01   p_joint 1.901408e-04

Joint ci ratio: 3.361052e-01	ci left: 1.572088e-04	ci right 2.219251e-04	k: 135	n:720000
Cons ci ratio: 7.761686e-03	ci left: 2.605754e-01	ci right 2.626071e-01	k: 188345	n:720000
KS ci ratio: 3.361052e-01	ci left: 1.572088e-04	ci right 2.219251e-04	k: 135	n:720000
SCN5A   720000 perm   374 sec   (1926 perm/sec)   p_kst 1.875000e-04   p_cons 2.615903e-01   p_joint 1.875000e-04

Joint ci ratio: 3.348765e-01	ci left: 1.563097e-04	ci right 2.203699e-04	k: 136	n:730000
Cons ci ratio: 7.708940e-03	ci left: 2.605524e-01	ci right 2.625701e-01	k: 190939	n:730000
KS ci ratio: 3.348765e-01	ci left: 1.563097e-04	ci right 2.203699e-04	k: 136	n:730000
SCN5A   730000 perm   382 sec   (1912 perm/sec)   p_kst 1.863014e-04   p_cons 2.615603e-01   p_joint 1.863014e-04

Joint ci ratio: 3.336612e-01	ci left: 1.554354e-04	ci right 2.188563e-04	k: 137	n:740000
Cons ci ratio: 7.655165e-03	ci left: 2.606353e-01	ci right 2.626395e-01	k: 193611	n:740000
KS ci ratio: 3.336612e-01	ci left: 1.554354e-04	ci right 2.188563e-04	k: 137	n:740000
SCN5A   740000 perm   390 sec   (1898 perm/sec)   p_kst 1.851351e-04   p_cons 2.616365e-01   p_joint 1.851351e-04

Joint ci ratio: 3.312693e-01	ci left: 1.558070e-04	ci right 2.188267e-04	k: 139	n:750000
Cons ci ratio: 7.603707e-03	ci left: 2.606549e-01	ci right 2.626457e-01	k: 196237	n:750000
KS ci ratio: 3.312693e-01	ci left: 1.558070e-04	ci right 2.188267e-04	k: 139	n:750000
SCN5A   750000 perm   398 sec   (1885 perm/sec)   p_kst 1.853333e-04   p_cons 2.616493e-01   p_joint 1.853333e-04

Joint ci ratio: 3.300927e-01	ci left: 1.549634e-04	ci right 2.173720e-04	k: 140	n:760000
Cons ci ratio: 7.555202e-03	ci left: 2.605753e-01	ci right 2.625528e-01	k: 198788	n:760000
KS ci ratio: 3.300927e-01	ci left: 1.549634e-04	ci right 2.173720e-04	k: 140	n:760000
SCN5A   760000 perm   406 sec   (1871 perm/sec)   p_kst 1.842105e-04   p_cons 2.615632e-01   p_joint 1.842105e-04

Joint ci ratio: 3.266359e-01	ci left: 1.565259e-04	ci right 2.187651e-04	k: 143	n:770000
Cons ci ratio: 7.507008e-03	ci left: 2.605291e-01	ci right 2.624935e-01	k: 201363	n:770000
KS ci ratio: 3.266359e-01	ci left: 1.565259e-04	ci right 2.187651e-04	k: 143	n:770000
SCN5A   770000 perm   415 sec   (1857 perm/sec)   p_kst 1.857143e-04   p_cons 2.615104e-01   p_joint 1.857143e-04

Joint ci ratio: 3.243909e-01	ci left: 1.568738e-04	ci right 2.187333e-04	k: 145	n:780000
Cons ci ratio: 7.458189e-03	ci left: 2.605634e-01	ci right 2.625153e-01	k: 204000	n:780000
KS ci ratio: 3.243909e-01	ci left: 1.568738e-04	ci right 2.187333e-04	k: 145	n:780000
SCN5A   780000 perm   423 sec   (1843 perm/sec)   p_kst 1.858974e-04   p_cons 2.615385e-01   p_joint 1.858974e-04

Joint ci ratio: 3.211084e-01	ci left: 1.583779e-04	ci right 2.200686e-04	k: 148	n:790000
Cons ci ratio: 7.411816e-03	ci left: 2.605186e-01	ci right 2.624579e-01	k: 206575	n:790000
KS ci ratio: 3.211084e-01	ci left: 1.583779e-04	ci right 2.200686e-04	k: 148	n:790000
SCN5A   790000 perm   432 sec   (1830 perm/sec)   p_kst 1.873418e-04   p_cons 2.614873e-01   p_joint 1.873418e-04

Joint ci ratio: 3.189748e-01	ci left: 1.586974e-04	ci right 2.200179e-04	k: 150	n:800000
Cons ci ratio: 7.364820e-03	ci left: 2.605522e-01	ci right 2.624795e-01	k: 209212	n:800000
KS ci ratio: 3.189748e-01	ci left: 1.586974e-04	ci right 2.200179e-04	k: 150	n:800000
SCN5A   800000 perm   440 sec   (1818 perm/sec)   p_kst 1.875000e-04   p_cons 2.615150e-01   p_joint 1.875000e-04

Joint ci ratio: 3.168831e-01	ci left: 1.590103e-04	ci right 2.199671e-04	k: 152	n:810000
Cons ci ratio: 7.319244e-03	ci left: 2.605568e-01	ci right 2.624721e-01	k: 211826	n:810000
KS ci ratio: 3.168831e-01	ci left: 1.590103e-04	ci right 2.199671e-04	k: 152	n:810000
SCN5A   810000 perm   449 sec   (1804 perm/sec)   p_kst 1.876543e-04   p_cons 2.615136e-01   p_joint 1.876543e-04

Joint ci ratio: 3.128199e-01	ci left: 1.615638e-04	ci right 2.225468e-04	k: 156	n:820000
Cons ci ratio: 7.273976e-03	ci left: 2.605893e-01	ci right 2.624929e-01	k: 214463	n:820000
KS ci ratio: 3.128199e-01	ci left: 1.615638e-04	ci right 2.225468e-04	k: 156	n:820000
SCN5A   820000 perm   458 sec   (1791 perm/sec)   p_kst 1.902439e-04   p_cons 2.615402e-01   p_joint 1.902439e-04

Joint ci ratio: 3.128203e-01	ci left: 1.596173e-04	ci right 2.198655e-04	k: 156	n:830000
Cons ci ratio: 7.230439e-03	ci left: 2.605729e-01	ci right 2.624649e-01	k: 217060	n:830000
KS ci ratio: 3.128203e-01	ci left: 1.596173e-04	ci right 2.198655e-04	k: 156	n:830000
SCN5A   830000 perm   467 sec   (1779 perm/sec)   p_kst 1.879518e-04   p_cons 2.615181e-01   p_joint 1.879518e-04

Joint ci ratio: 3.089095e-01	ci left: 1.621076e-04	ci right 2.223802e-04	k: 160	n:840000
Cons ci ratio: 7.187653e-03	ci left: 2.605581e-01	ci right 2.624388e-01	k: 219658	n:840000
KS ci ratio: 3.089095e-01	ci left: 1.621076e-04	ci right 2.223802e-04	k: 160	n:840000
SCN5A   840000 perm   475 sec   (1767 perm/sec)   p_kst 1.904762e-04   p_cons 2.614976e-01   p_joint 1.904762e-04

Joint ci ratio: 3.079548e-01	ci left: 1.612858e-04	ci right 2.210312e-04	k: 161	n:850000
Cons ci ratio: 7.145617e-03	ci left: 2.605437e-01	ci right 2.624132e-01	k: 222256	n:850000
KS ci ratio: 3.079548e-01	ci left: 1.612858e-04	ci right 2.210312e-04	k: 161	n:850000
SCN5A   850000 perm   484 sec   (1755 perm/sec)   p_kst 1.894118e-04   p_cons 2.614776e-01   p_joint 1.894118e-04

Joint ci ratio: 3.051421e-01	ci left: 1.626305e-04	ci right 2.222169e-04	k: 164	n:860000
Cons ci ratio: 7.105337e-03	ci left: 2.604739e-01	ci right 2.623324e-01	k: 224806	n:860000
KS ci ratio: 3.051421e-01	ci left: 1.626305e-04	ci right 2.222169e-04	k: 164	n:860000
SCN5A   860000 perm   493 sec   (1743 perm/sec)   p_kst 1.906977e-04   p_cons 2.614023e-01   p_joint 1.906977e-04

Joint ci ratio: 3.051425e-01	ci left: 1.607612e-04	ci right 2.196627e-04	k: 164	n:870000
Cons ci ratio: 7.064995e-03	ci left: 2.604459e-01	ci right 2.622936e-01	k: 227391	n:870000
KS ci ratio: 3.051425e-01	ci left: 1.607612e-04	ci right 2.196627e-04	k: 164	n:870000
SCN5A   870000 perm   502 sec   (1732 perm/sec)   p_kst 1.885057e-04   p_cons 2.613690e-01   p_joint 1.885057e-04

Joint ci ratio: 3.024055e-01	ci left: 1.620837e-04	ci right 2.208347e-04	k: 167	n:880000
Cons ci ratio: 7.024835e-03	ci left: 2.604459e-01	ci right 2.622830e-01	k: 230000	n:880000
KS ci ratio: 3.024055e-01	ci left: 1.620837e-04	ci right 2.208347e-04	k: 167	n:880000
SCN5A   880000 perm   512 sec   (1720 perm/sec)   p_kst 1.897727e-04   p_cons 2.613636e-01   p_joint 1.897727e-04

Joint ci ratio: 2.988681e-01	ci left: 1.644180e-04	ci right 2.231857e-04	k: 171	n:890000
Cons ci ratio: 6.984865e-03	ci left: 2.604728e-01	ci right 2.622996e-01	k: 232633	n:890000
KS ci ratio: 2.988681e-01	ci left: 1.644180e-04	ci right 2.231857e-04	k: 171	n:890000
SCN5A   890000 perm   521 sec   (1709 perm/sec)   p_kst 1.921348e-04   p_cons 2.613854e-01   p_joint 1.921348e-04

Joint ci ratio: 2.971455e-01	ci left: 1.646472e-04	ci right 2.230937e-04	k: 173	n:900000
Cons ci ratio: 6.946289e-03	ci left: 2.604591e-01	ci right 2.622757e-01	k: 235230	n:900000
KS ci ratio: 2.971455e-01	ci left: 1.646472e-04	ci right 2.230937e-04	k: 173	n:900000
SCN5A   900000 perm   530 sec   (1698 perm/sec)   p_kst 1.922222e-04   p_cons 2.613667e-01   p_joint 1.922222e-04

Joint ci ratio: 2.971459e-01	ci left: 1.628379e-04	ci right 2.206422e-04	k: 173	n:910000
Cons ci ratio: 6.907264e-03	ci left: 2.605062e-01	ci right 2.623129e-01	k: 237882	n:910000
KS ci ratio: 2.971459e-01	ci left: 1.628379e-04	ci right 2.206422e-04	k: 173	n:910000
SCN5A   910000 perm   539 sec   (1688 perm/sec)   p_kst 1.901099e-04   p_cons 2.614088e-01   p_joint 1.901099e-04

Joint ci ratio: 2.962958e-01	ci left: 1.620739e-04	ci right 2.194115e-04	k: 174	n:920000
Cons ci ratio: 6.870591e-03	ci left: 2.604567e-01	ci right 2.622535e-01	k: 240446	n:920000
KS ci ratio: 2.962958e-01	ci left: 1.620739e-04	ci right 2.194115e-04	k: 174	n:920000
SCN5A   920000 perm   549 sec   (1677 perm/sec)   p_kst 1.891304e-04   p_cons 2.613543e-01   p_joint 1.891304e-04

Joint ci ratio: 2.921511e-01	ci left: 1.653108e-04	ci right 2.228242e-04	k: 179	n:930000
Cons ci ratio: 6.834172e-03	ci left: 2.604266e-01	ci right 2.622136e-01	k: 243027	n:930000
KS ci ratio: 2.921511e-01	ci left: 1.653108e-04	ci right 2.228242e-04	k: 179	n:930000
SCN5A   930000 perm   558 sec   (1666 perm/sec)   p_kst 1.924731e-04   p_cons 2.613194e-01   p_joint 1.924731e-04

Joint ci ratio: 2.913431e-01	ci left: 1.645382e-04	ci right 2.215952e-04	k: 180	n:940000
Cons ci ratio: 6.797651e-03	ci left: 2.604354e-01	ci right 2.622128e-01	k: 245644	n:940000
KS ci ratio: 2.913431e-01	ci left: 1.645382e-04	ci right 2.215952e-04	k: 180	n:940000
SCN5A   940000 perm   568 sec   (1656 perm/sec)   p_kst 1.914894e-04   p_cons 2.613234e-01   p_joint 1.914894e-04

Joint ci ratio: 2.905417e-01	ci left: 1.637820e-04	ci right 2.203919e-04	k: 181	n:950000
Cons ci ratio: 6.762171e-03	ci left: 2.604178e-01	ci right 2.621858e-01	k: 248236	n:950000
KS ci ratio: 2.905417e-01	ci left: 1.637820e-04	ci right 2.203919e-04	k: 181	n:950000
SCN5A   950000 perm   577 sec   (1645 perm/sec)   p_kst 1.905263e-04   p_cons 2.613011e-01   p_joint 1.905263e-04

Joint ci ratio: 2.905420e-01	ci left: 1.620759e-04	ci right 2.180962e-04	k: 181	n:960000
Cons ci ratio: 6.727332e-03	ci left: 2.603953e-01	ci right 2.621540e-01	k: 250823	n:960000
KS ci ratio: 2.905420e-01	ci left: 1.620759e-04	ci right 2.180962e-04	k: 181	n:960000
SCN5A   960000 perm   587 sec   (1636 perm/sec)   p_kst 1.885417e-04   p_cons 2.612740e-01   p_joint 1.885417e-04

Joint ci ratio: 2.889587e-01	ci left: 1.623171e-04	ci right 2.180590e-04	k: 183	n:970000
Cons ci ratio: 6.692668e-03	ci left: 2.603940e-01	ci right 2.621435e-01	k: 253430	n:970000
KS ci ratio: 2.889587e-01	ci left: 1.623171e-04	ci right 2.180590e-04	k: 183	n:970000
SCN5A   970000 perm   597 sec   (1625 perm/sec)   p_kst 1.886598e-04   p_cons 2.612680e-01   p_joint 1.886598e-04

Joint ci ratio: 2.889590e-01	ci left: 1.606608e-04	ci right 2.158340e-04	k: 183	n:980000
Cons ci ratio: 6.657777e-03	ci left: 2.604365e-01	ci right 2.621772e-01	k: 256080	n:980000
KS ci ratio: 2.889590e-01	ci left: 1.606608e-04	ci right 2.158340e-04	k: 183	n:980000
SCN5A   980000 perm   607 sec   (1615 perm/sec)   p_kst 1.867347e-04   p_cons 2.613061e-01   p_joint 1.867347e-04

Joint ci ratio: 2.874012e-01	ci left: 1.609121e-04	ci right 2.158196e-04	k: 185	n:990000
Cons ci ratio: 6.624883e-03	ci left: 2.603934e-01	ci right 2.621252e-01	k: 258646	n:990000
KS ci ratio: 2.874012e-01	ci left: 1.609121e-04	ci right 2.158196e-04	k: 185	n:990000
SCN5A   990000 perm   617 sec   (1605 perm/sec)   p_kst 1.868687e-04   p_cons 2.612586e-01   p_joint 1.868687e-04

Joint ci ratio: 2.858684e-01	ci left: 1.611592e-04	ci right 2.158048e-04	k: 187	n:1000000
Cons ci ratio: 6.591532e-03	ci left: 2.604061e-01	ci right 2.621293e-01	k: 261267	n:1000000
KS ci ratio: 2.858684e-01	ci left: 1.611592e-04	ci right 2.158048e-04	k: 187	n:1000000
SCN5A   1000000 perm   627 sec   (1595 perm/sec)   p_kst 1.870000e-04   p_cons 2.612670e-01   p_joint 1.870000e-04

Joint ci ratio: 2.828746e-01	ci left: 1.632416e-04	ci right 2.179102e-04	k: 191	n:1010000
Cons ci ratio: 6.557838e-03	ci left: 2.604681e-01	ci right 2.621828e-01	k: 263938	n:1010000
KS ci ratio: 2.828746e-01	ci left: 1.632416e-04	ci right 2.179102e-04	k: 191	n:1010000
SCN5A   1010000 perm   637 sec   (1586 perm/sec)   p_kst 1.891089e-04   p_cons 2.613248e-01   p_joint 1.891089e-04

Joint ci ratio: 2.814127e-01	ci left: 1.634633e-04	ci right 2.178730e-04	k: 193	n:1020000
Cons ci ratio: 6.526678e-03	ci left: 2.604094e-01	ci right 2.621155e-01	k: 266487	n:1020000
KS ci ratio: 2.814127e-01	ci left: 1.634633e-04	ci right 2.178730e-04	k: 193	n:1020000
SCN5A   1020000 perm   647 sec   (1576 perm/sec)   p_kst 1.892157e-04   p_cons 2.612618e-01   p_joint 1.892157e-04

Joint ci ratio: 2.814130e-01	ci left: 1.618762e-04	ci right 2.157577e-04	k: 193	n:1030000
Cons ci ratio: 6.494340e-03	ci left: 2.604478e-01	ci right 2.621457e-01	k: 269135	n:1030000
KS ci ratio: 2.814130e-01	ci left: 1.618762e-04	ci right 2.157577e-04	k: 193	n:1030000
SCN5A   1030000 perm   658 sec   (1566 perm/sec)   p_kst 1.873786e-04   p_cons 2.612961e-01   p_joint 1.873786e-04

Joint ci ratio: 2.785556e-01	ci left: 1.638959e-04	ci right 2.177986e-04	k: 197	n:1040000
Cons ci ratio: 6.462381e-03	ci left: 2.604913e-01	ci right 2.621811e-01	k: 271789	n:1040000
KS ci ratio: 2.785556e-01	ci left: 1.638959e-04	ci right 2.177986e-04	k: 197	n:1040000
SCN5A   1040000 perm   668 sec   (1557 perm/sec)   p_kst 1.894231e-04   p_cons 2.613356e-01   p_joint 1.894231e-04

Joint ci ratio: 2.757836e-01	ci left: 1.658798e-04	ci right 2.197979e-04	k: 201	n:1050000
Cons ci ratio: 6.432032e-03	ci left: 2.604655e-01	ci right 2.621472e-01	k: 274371	n:1050000
KS ci ratio: 2.757836e-01	ci left: 1.658798e-04	ci right 2.197979e-04	k: 201	n:1050000
SCN5A   1050000 perm   678 sec   (1548 perm/sec)   p_kst 1.914286e-04   p_cons 2.613057e-01   p_joint 1.914286e-04

Joint ci ratio: 2.737581e-01	ci left: 1.669501e-04	ci right 2.207490e-04	k: 204	n:1060000
Cons ci ratio: 6.402967e-03	ci left: 2.603884e-01	ci right 2.620619e-01	k: 276898	n:1060000
KS ci ratio: 2.737581e-01	ci left: 1.669501e-04	ci right 2.207490e-04	k: 204	n:1060000
SCN5A   1060000 perm   689 sec   (1539 perm/sec)   p_kst 1.924528e-04   p_cons 2.612245e-01   p_joint 1.924528e-04

Joint ci ratio: 2.698372e-01	ci left: 1.706153e-04	ci right 2.246745e-04	k: 210	n:1070000
Cons ci ratio: 6.373304e-03	ci left: 2.603725e-01	ci right 2.620381e-01	k: 279489	n:1070000
KS ci ratio: 2.698372e-01	ci left: 1.706153e-04	ci right 2.246745e-04	k: 210	n:1070000
SCN5A   1070000 perm   700 sec   (1529 perm/sec)   p_kst 1.962617e-04   p_cons 2.612047e-01   p_joint 1.962617e-04

Joint ci ratio: 2.679390e-01	ci left: 1.716261e-04	ci right 2.255587e-04	k: 213	n:1080000
Cons ci ratio: 6.343761e-03	ci left: 2.603745e-01	ci right 2.620324e-01	k: 282099	n:1080000
KS ci ratio: 2.679390e-01	ci left: 1.716261e-04	ci right 2.255587e-04	k: 213	n:1080000
SCN5A   1080000 perm   710 sec   (1520 perm/sec)   p_kst 1.972222e-04   p_cons 2.612028e-01   p_joint 1.972222e-04

Joint ci ratio: 2.673153e-01	ci left: 1.709074e-04	ci right 2.244682e-04	k: 214	n:1090000
Cons ci ratio: 6.314069e-03	ci left: 2.604103e-01	ci right 2.620607e-01	k: 284746	n:1090000
KS ci ratio: 2.673153e-01	ci left: 1.709074e-04	ci right 2.244682e-04	k: 214	n:1090000
SCN5A   1090000 perm   721 sec   (1512 perm/sec)   p_kst 1.963303e-04   p_cons 2.612349e-01   p_joint 1.963303e-04

Joint ci ratio: 2.666959e-01	ci left: 1.702019e-04	ci right 2.233974e-04	k: 215	n:1100000
Cons ci ratio: 6.285398e-03	ci left: 2.604083e-01	ci right 2.620511e-01	k: 287352	n:1100000
KS ci ratio: 2.666959e-01	ci left: 1.702019e-04	ci right 2.233974e-04	k: 215	n:1100000
SCN5A   1100000 perm   732 sec   (1503 perm/sec)   p_kst 1.954545e-04   p_cons 2.612291e-01   p_joint 1.954545e-04

Joint ci ratio: 2.654697e-01	ci left: 1.703502e-04	ci right 2.233066e-04	k: 217	n:1110000
Cons ci ratio: 6.255901e-03	ci left: 2.604811e-01	ci right 2.621166e-01	k: 290041	n:1110000
KS ci ratio: 2.654697e-01	ci left: 1.703502e-04	ci right 2.233066e-04	k: 217	n:1110000
SCN5A   1110000 perm   743 sec   (1495 perm/sec)   p_kst 1.954955e-04   p_cons 2.612982e-01   p_joint 1.954955e-04

Joint ci ratio: 2.654699e-01	ci left: 1.688292e-04	ci right 2.213128e-04	k: 217	n:1120000
Cons ci ratio: 6.227579e-03	ci left: 2.605052e-01	ci right 2.621335e-01	k: 292677	n:1120000
KS ci ratio: 2.654699e-01	ci left: 1.688292e-04	ci right 2.213128e-04	k: 217	n:1120000
SCN5A   1120000 perm   754 sec   (1486 perm/sec)   p_kst 1.937500e-04   p_cons 2.613187e-01   p_joint 1.937500e-04

Joint ci ratio: 2.648633e-01	ci left: 1.681613e-04	ci right 2.202979e-04	k: 218	n:1130000
Cons ci ratio: 6.200064e-03	ci left: 2.605025e-01	ci right 2.621235e-01	k: 295283	n:1130000
KS ci ratio: 2.648633e-01	ci left: 1.681613e-04	ci right 2.202979e-04	k: 218	n:1130000
SCN5A   1130000 perm   765 sec   (1478 perm/sec)   p_kst 1.929204e-04   p_cons 2.613124e-01   p_joint 1.929204e-04

Joint ci ratio: 2.630674e-01	ci left: 1.691436e-04	ci right 2.211708e-04	k: 221	n:1140000
Cons ci ratio: 6.172953e-03	ci left: 2.604972e-01	ci right 2.621110e-01	k: 297886	n:1140000
KS ci ratio: 2.630674e-01	ci left: 1.691436e-04	ci right 2.211708e-04	k: 221	n:1140000
SCN5A   1140000 perm   776 sec   (1469 perm/sec)   p_kst 1.938596e-04   p_cons 2.613035e-01   p_joint 1.938596e-04

Joint ci ratio: 2.624770e-01	ci left: 1.684851e-04	ci right 2.201743e-04	k: 222	n:1150000
Cons ci ratio: 6.145337e-03	ci left: 2.605458e-01	ci right 2.621528e-01	k: 300551	n:1150000
KS ci ratio: 2.624770e-01	ci left: 1.684851e-04	ci right 2.201743e-04	k: 222	n:1150000
SCN5A   1150000 perm   787 sec   (1461 perm/sec)   p_kst 1.930435e-04   p_cons 2.613487e-01   p_joint 1.930435e-04

Joint ci ratio: 2.607290e-01	ci left: 1.694493e-04	ci right 2.210316e-04	k: 225	n:1160000
Cons ci ratio: 6.119030e-03	ci left: 2.605342e-01	ci right 2.621342e-01	k: 303147	n:1160000
KS ci ratio: 2.607290e-01	ci left: 1.694493e-04	ci right 2.210316e-04	k: 225	n:1160000
SCN5A   1160000 perm   799 sec   (1452 perm/sec)   p_kst 1.939655e-04   p_cons 2.613336e-01   p_joint 1.939655e-04

Joint ci ratio: 2.590154e-01	ci left: 1.703981e-04	ci right 2.218732e-04	k: 228	n:1170000
Cons ci ratio: 6.091480e-03	ci left: 2.606228e-01	ci right 2.622160e-01	k: 305860	n:1170000
KS ci ratio: 2.590154e-01	ci left: 1.703981e-04	ci right 2.218732e-04	k: 228	n:1170000
SCN5A   1170000 perm   810 sec   (1444 perm/sec)   p_kst 1.948718e-04   p_cons 2.614188e-01   p_joint 1.948718e-04

Joint ci ratio: 2.578917e-01	ci left: 1.705392e-04	ci right 2.217974e-04	k: 230	n:1180000
Cons ci ratio: 6.065204e-03	ci left: 2.606522e-01	ci right 2.622388e-01	k: 308505	n:1180000
KS ci ratio: 2.578917e-01	ci left: 1.705392e-04	ci right 2.217974e-04	k: 230	n:1180000
SCN5A   1180000 perm   822 sec   (1436 perm/sec)   p_kst 1.949153e-04   p_cons 2.614449e-01   p_joint 1.949153e-04

Joint ci ratio: 2.567825e-01	ci left: 1.706784e-04	ci right 2.217224e-04	k: 232	n:1190000
Cons ci ratio: 6.039974e-03	ci left: 2.606359e-01	ci right 2.622157e-01	k: 311096	n:1190000
KS ci ratio: 2.567825e-01	ci left: 1.706784e-04	ci right 2.217224e-04	k: 232	n:1190000
SCN5A   1190000 perm   834 sec   (1427 perm/sec)   p_kst 1.949580e-04   p_cons 2.614252e-01   p_joint 1.949580e-04

Joint ci ratio: 2.551451e-01	ci left: 1.715957e-04	ci right 2.225347e-04	k: 235	n:1200000
Cons ci ratio: 6.015278e-03	ci left: 2.606057e-01	ci right 2.621788e-01	k: 313670	n:1200000
KS ci ratio: 2.551451e-01	ci left: 1.715957e-04	ci right 2.225347e-04	k: 235	n:1200000
SCN5A   1200000 perm   845 sec   (1420 perm/sec)   p_kst 1.958333e-04   p_cons 2.613917e-01   p_joint 1.958333e-04

Joint ci ratio: 2.540708e-01	ci left: 1.717249e-04	ci right 2.224537e-04	k: 237	n:1210000
Cons ci ratio: 5.990766e-03	ci left: 2.605834e-01	ci right 2.621500e-01	k: 316253	n:1210000
KS ci ratio: 2.540708e-01	ci left: 1.717249e-04	ci right 2.224537e-04	k: 237	n:1210000
SCN5A   1210000 perm   857 sec   (1412 perm/sec)   p_kst 1.958678e-04   p_cons 2.613661e-01   p_joint 1.958678e-04

Joint ci ratio: 2.530099e-01	ci left: 1.718525e-04	ci right 2.223736e-04	k: 239	n:1220000
Cons ci ratio: 5.966299e-03	ci left: 2.605779e-01	ci right 2.621380e-01	k: 318856	n:1220000
KS ci ratio: 2.530099e-01	ci left: 1.718525e-04	ci right 2.223736e-04	k: 239	n:1220000
SCN5A   1220000 perm   869 sec   (1404 perm/sec)   p_kst 1.959016e-04   p_cons 2.613574e-01   p_joint 1.959016e-04

Joint ci ratio: 2.514432e-01	ci left: 1.727402e-04	ci right 2.231586e-04	k: 242	n:1230000
Cons ci ratio: 5.940890e-03	ci left: 2.606529e-01	ci right 2.622068e-01	k: 321558	n:1230000
KS ci ratio: 2.514432e-01	ci left: 1.727402e-04	ci right 2.231586e-04	k: 242	n:1230000
SCN5A   1230000 perm   881 sec   (1397 perm/sec)   p_kst 1.967480e-04   p_cons 2.614293e-01   p_joint 1.967480e-04

Joint ci ratio: 2.499052e-01	ci left: 1.736146e-04	ci right 2.239299e-04	k: 245	n:1240000
Cons ci ratio: 5.917396e-03	ci left: 2.606227e-01	ci right 2.621703e-01	k: 324131	n:1240000
KS ci ratio: 2.499052e-01	ci left: 1.736146e-04	ci right 2.239299e-04	k: 245	n:1240000
SCN5A   1240000 perm   893 sec   (1389 perm/sec)   p_kst 1.975806e-04   p_cons 2.613960e-01   p_joint 1.975806e-04

Joint ci ratio: 2.469118e-01	ci left: 1.767269e-04	ci right 2.272366e-04	k: 251	n:1250000
Cons ci ratio: 5.893850e-03	ci left: 2.606147e-01	ci right 2.621560e-01	k: 326731	n:1250000
KS ci ratio: 2.469118e-01	ci left: 1.767269e-04	ci right 2.272366e-04	k: 251	n:1250000
SCN5A   1250000 perm   905 sec   (1382 perm/sec)   p_kst 2.008000e-04   p_cons 2.613848e-01   p_joint 2.008000e-04

Joint ci ratio: 2.440235e-01	ci left: 1.797934e-04	ci right 2.304873e-04	k: 257	n:1260000
Cons ci ratio: 5.870823e-03	ci left: 2.605909e-01	ci right 2.621261e-01	k: 329311	n:1260000
KS ci ratio: 2.440235e-01	ci left: 1.797934e-04	ci right 2.304873e-04	k: 257	n:1260000
SCN5A   1260000 perm   917 sec   (1375 perm/sec)   p_kst 2.039683e-04   p_cons 2.613579e-01   p_joint 2.039683e-04

Joint ci ratio: 2.430831e-01	ci left: 1.798564e-04	ci right 2.303432e-04	k: 259	n:1270000
Cons ci ratio: 5.846956e-03	ci left: 2.606407e-01	ci right 2.621699e-01	k: 331984	n:1270000
KS ci ratio: 2.430831e-01	ci left: 1.798564e-04	ci right 2.303432e-04	k: 259	n:1270000
SCN5A   1270000 perm   929 sec   (1368 perm/sec)   p_kst 2.039370e-04   p_cons 2.614047e-01   p_joint 2.039370e-04

Joint ci ratio: 2.412343e-01	ci left: 1.813867e-04	ci right 2.318579e-04	k: 263	n:1280000
Cons ci ratio: 5.824437e-03	ci left: 2.606194e-01	ci right 2.621426e-01	k: 334567	n:1280000
KS ci ratio: 2.412343e-01	ci left: 1.813867e-04	ci right 2.318579e-04	k: 263	n:1280000
SCN5A   1280000 perm   941 sec   (1360 perm/sec)   p_kst 2.054688e-04   p_cons 2.613805e-01   p_joint 2.054688e-04

Joint ci ratio: 2.407789e-01	ci left: 1.807089e-04	ci right 2.308824e-04	k: 264	n:1290000
Cons ci ratio: 5.802096e-03	ci left: 2.606040e-01	ci right 2.621211e-01	k: 337157	n:1290000
KS ci ratio: 2.407789e-01	ci left: 1.807089e-04	ci right 2.308824e-04	k: 264	n:1290000
SCN5A   1290000 perm   953 sec   (1354 perm/sec)   p_kst 2.046512e-04   p_cons 2.613620e-01   p_joint 2.046512e-04

Joint ci ratio: 2.398754e-01	ci left: 1.807647e-04	ci right 2.307373e-04	k: 266	n:1300000
Cons ci ratio: 5.779894e-03	ci left: 2.605964e-01	ci right 2.621077e-01	k: 339757	n:1300000
KS ci ratio: 2.398754e-01	ci left: 1.807647e-04	ci right 2.307373e-04	k: 266	n:1300000
SCN5A   1300000 perm   965 sec   (1347 perm/sec)   p_kst 2.046154e-04   p_cons 2.613515e-01   p_joint 2.046154e-04

Joint ci ratio: 2.394275e-01	ci left: 1.801023e-04	ci right 2.297851e-04	k: 267	n:1310000
Cons ci ratio: 5.758241e-03	ci left: 2.605692e-01	ci right 2.620746e-01	k: 342331	n:1310000
KS ci ratio: 2.394275e-01	ci left: 1.801023e-04	ci right 2.297851e-04	k: 267	n:1310000
SCN5A   1310000 perm   978 sec   (1340 perm/sec)   p_kst 2.038168e-04   p_cons 2.613214e-01   p_joint 2.038168e-04

Joint ci ratio: 2.389822e-01	ci left: 1.794501e-04	ci right 2.288472e-04	k: 268	n:1320000
Cons ci ratio: 5.736525e-03	ci left: 2.605628e-01	ci right 2.620625e-01	k: 344932	n:1320000
KS ci ratio: 2.389822e-01	ci left: 1.794501e-04	ci right 2.288472e-04	k: 268	n:1320000
SCN5A   1320000 perm   990 sec   (1334 perm/sec)   p_kst 2.030303e-04   p_cons 2.613121e-01   p_joint 2.030303e-04

Joint ci ratio: 2.372248e-01	ci left: 1.809290e-04	ci right 2.303131e-04	k: 272	n:1330000
Cons ci ratio: 5.714508e-03	ci left: 2.605933e-01	ci right 2.620874e-01	k: 347582	n:1330000
KS ci ratio: 2.372248e-01	ci left: 1.809290e-04	ci right 2.303131e-04	k: 272	n:1330000
SCN5A   1330000 perm   1002 sec   (1327 perm/sec)   p_kst 2.045113e-04   p_cons 2.613398e-01   p_joint 2.045113e-04

Joint ci ratio: 2.372249e-01	ci left: 1.795787e-04	ci right 2.285944e-04	k: 272	n:1340000
Cons ci ratio: 5.692974e-03	ci left: 2.606077e-01	ci right 2.620963e-01	k: 350211	n:1340000
KS ci ratio: 2.372249e-01	ci left: 1.795787e-04	ci right 2.285944e-04	k: 272	n:1340000
SCN5A   1340000 perm   1015 sec   (1320 perm/sec)   p_kst 2.029851e-04   p_cons 2.613515e-01   p_joint 2.029851e-04

Joint ci ratio: 2.363607e-01	ci left: 1.796421e-04	ci right 2.284703e-04	k: 274	n:1350000
Cons ci ratio: 5.672378e-03	ci left: 2.605746e-01	ci right 2.620576e-01	k: 352776	n:1350000
KS ci ratio: 2.363607e-01	ci left: 1.796421e-04	ci right 2.284703e-04	k: 274	n:1350000
SCN5A   1350000 perm   1028 sec   (1314 perm/sec)   p_kst 2.029630e-04   p_cons 2.613156e-01   p_joint 2.029630e-04

Joint ci ratio: 2.359322e-01	ci left: 1.790130e-04	ci right 2.275691e-04	k: 275	n:1360000
Cons ci ratio: 5.651788e-03	ci left: 2.605566e-01	ci right 2.620341e-01	k: 355361	n:1360000
KS ci ratio: 2.359322e-01	ci left: 1.790130e-04	ci right 2.275691e-04	k: 275	n:1360000
SCN5A   1360000 perm   1041 sec   (1307 perm/sec)   p_kst 2.022059e-04   p_cons 2.612949e-01   p_joint 2.022059e-04

Joint ci ratio: 2.359324e-01	ci left: 1.777063e-04	ci right 2.259081e-04	k: 275	n:1370000
Cons ci ratio: 5.630953e-03	ci left: 2.605710e-01	ci right 2.620431e-01	k: 357990	n:1370000
KS ci ratio: 2.359324e-01	ci left: 1.777063e-04	ci right 2.259081e-04	k: 275	n:1370000
SCN5A   1370000 perm   1053 sec   (1300 perm/sec)   p_kst 2.007299e-04   p_cons 2.613066e-01   p_joint 2.007299e-04

Joint ci ratio: 2.342410e-01	ci left: 1.791464e-04	ci right 2.273400e-04	k: 279	n:1380000
Cons ci ratio: 5.610104e-03	ci left: 2.606019e-01	ci right 2.620687e-01	k: 360642	n:1380000
KS ci ratio: 2.342410e-01	ci left: 1.791464e-04	ci right 2.273400e-04	k: 279	n:1380000
SCN5A   1380000 perm   1066 sec   (1294 perm/sec)   p_kst 2.021739e-04   p_cons 2.613348e-01   p_joint 2.021739e-04

Joint ci ratio: 2.334088e-01	ci left: 1.792122e-04	ci right 2.272274e-04	k: 281	n:1390000
Cons ci ratio: 5.590026e-03	ci left: 2.605949e-01	ci right 2.620564e-01	k: 363242	n:1390000
KS ci ratio: 2.334088e-01	ci left: 1.792122e-04	ci right 2.272274e-04	k: 281	n:1390000
SCN5A   1390000 perm   1079 sec   (1288 perm/sec)   p_kst 2.021583e-04   p_cons 2.613252e-01   p_joint 2.021583e-04

Joint ci ratio: 2.334090e-01	ci left: 1.779321e-04	ci right 2.256044e-04	k: 281	n:1400000
Cons ci ratio: 5.570348e-03	ci left: 2.605752e-01	ci right 2.620315e-01	k: 365824	n:1400000
KS ci ratio: 2.334090e-01	ci left: 1.779321e-04	ci right 2.256044e-04	k: 281	n:1400000
SCN5A   1400000 perm   1093 sec   (1281 perm/sec)   p_kst 2.007143e-04   p_cons 2.613029e-01   p_joint 2.007143e-04

Joint ci ratio: 2.321772e-01	ci left: 1.786737e-04	ci right 2.262559e-04	k: 284	n:1410000
Cons ci ratio: 5.549847e-03	ci left: 2.606274e-01	ci right 2.620785e-01	k: 368507	n:1410000
KS ci ratio: 2.321772e-01	ci left: 1.786737e-04	ci right 2.262559e-04	k: 284	n:1410000
SCN5A   1410000 perm   1106 sec   (1275 perm/sec)   p_kst 2.014184e-04   p_cons 2.613525e-01   p_joint 2.014184e-04

Joint ci ratio: 2.317710e-01	ci left: 1.780788e-04	ci right 2.254076e-04	k: 285	n:1420000
Cons ci ratio: 5.530094e-03	ci left: 2.606422e-01	ci right 2.620883e-01	k: 371138	n:1420000
KS ci ratio: 2.317710e-01	ci left: 1.780788e-04	ci right 2.254076e-04	k: 285	n:1420000
SCN5A   1420000 perm   1119 sec   (1269 perm/sec)   p_kst 2.007042e-04   p_cons 2.613648e-01   p_joint 2.007042e-04

Joint ci ratio: 2.317712e-01	ci left: 1.768335e-04	ci right 2.238313e-04	k: 285	n:1430000
Cons ci ratio: 5.511529e-03	ci left: 2.605884e-01	ci right 2.620293e-01	k: 373671	n:1430000
KS ci ratio: 2.317712e-01	ci left: 1.768335e-04	ci right 2.238313e-04	k: 285	n:1430000
SCN5A   1430000 perm   1132 sec   (1263 perm/sec)   p_kst 1.993007e-04   p_cons 2.613084e-01   p_joint 1.993007e-04

Joint ci ratio: 2.282078e-01	ci left: 1.814954e-04	ci right 2.288863e-04	k: 294	n:1440000
Cons ci ratio: 5.492547e-03	ci left: 2.605777e-01	ci right 2.620135e-01	k: 376265	n:1440000
KS ci ratio: 2.282078e-01	ci left: 1.814954e-04	ci right 2.288863e-04	k: 294	n:1440000
SCN5A   1440000 perm   1146 sec   (1257 perm/sec)   p_kst 2.041667e-04   p_cons 2.612951e-01   p_joint 2.041667e-04

Joint ci ratio: 2.274381e-01	ci left: 1.815443e-04	ci right 2.287657e-04	k: 296	n:1450000
Cons ci ratio: 5.473975e-03	ci left: 2.605520e-01	ci right 2.619828e-01	k: 378837	n:1450000
KS ci ratio: 2.274381e-01	ci left: 1.815443e-04	ci right 2.287657e-04	k: 296	n:1450000
SCN5A   1450000 perm   1159 sec   (1251 perm/sec)   p_kst 2.041379e-04   p_cons 2.612669e-01   p_joint 2.041379e-04

Joint ci ratio: 2.259217e-01	ci left: 1.828851e-04	ci right 2.300938e-04	k: 300	n:1460000
Cons ci ratio: 5.455503e-03	ci left: 2.605327e-01	ci right 2.619586e-01	k: 381418	n:1460000
KS ci ratio: 2.259217e-01	ci left: 1.828851e-04	ci right 2.300938e-04	k: 300	n:1460000
SCN5A   1460000 perm   1173 sec   (1245 perm/sec)   p_kst 2.054795e-04   p_cons 2.612452e-01   p_joint 2.054795e-04

Joint ci ratio: 2.248041e-01	ci left: 1.835666e-04	ci right 2.306844e-04	k: 303	n:1470000
Cons ci ratio: 5.437140e-03	ci left: 2.605192e-01	ci right 2.619402e-01	k: 384007	n:1470000
KS ci ratio: 2.248041e-01	ci left: 1.835666e-04	ci right 2.306844e-04	k: 303	n:1470000
SCN5A   1470000 perm   1186 sec   (1239 perm/sec)   p_kst 2.061224e-04   p_cons 2.612293e-01   p_joint 2.061224e-04

Joint ci ratio: 2.237029e-01	ci left: 1.842394e-04	ci right 2.312664e-04	k: 306	n:1480000
Cons ci ratio: 5.418933e-03	ci left: 2.605079e-01	ci right 2.619241e-01	k: 386599	n:1480000
KS ci ratio: 2.237029e-01	ci left: 1.842394e-04	ci right 2.312664e-04	k: 306	n:1480000
SCN5A   1480000 perm   1200 sec   (1234 perm/sec)   p_kst 2.067568e-04   p_cons 2.612155e-01   p_joint 2.067568e-04

Joint ci ratio: 2.222595e-01	ci left: 1.855376e-04	ci right 2.325485e-04	k: 310	n:1490000
Cons ci ratio: 5.401245e-03	ci left: 2.604727e-01	ci right 2.618840e-01	k: 389155	n:1490000
KS ci ratio: 2.222595e-01	ci left: 1.855376e-04	ci right 2.325485e-04	k: 310	n:1490000
SCN5A   1490000 perm   1214 sec   (1228 perm/sec)   p_kst 2.080537e-04   p_cons 2.611779e-01   p_joint 2.080537e-04

Joint ci ratio: 2.208437e-01	ci left: 1.868194e-04	ci right 2.338126e-04	k: 314	n:1500000
Cons ci ratio: 5.382707e-03	ci left: 2.605111e-01	ci right 2.619178e-01	k: 391821	n:1500000
KS ci ratio: 2.208437e-01	ci left: 1.868194e-04	ci right 2.338126e-04	k: 314	n:1500000
SCN5A   1500000 perm   1227 sec   (1222 perm/sec)   p_kst 2.093333e-04   p_cons 2.612140e-01   p_joint 2.093333e-04

Joint ci ratio: 2.204941e-01	ci left: 1.862078e-04	ci right 2.329630e-04	k: 315	n:1510000
Cons ci ratio: 5.365214e-03	ci left: 2.604876e-01	ci right 2.618895e-01	k: 394394	n:1510000
KS ci ratio: 2.204941e-01	ci left: 1.862078e-04	ci right 2.329630e-04	k: 315	n:1510000
SCN5A   1510000 perm   1241 sec   (1217 perm/sec)   p_kst 2.086093e-04   p_cons 2.611881e-01   p_joint 2.086093e-04

Joint ci ratio: 2.197996e-01	ci left: 1.862260e-04	ci right 2.328185e-04	k: 317	n:1520000
Cons ci ratio: 5.346952e-03	ci left: 2.605320e-01	ci right 2.619294e-01	k: 397070	n:1520000
KS ci ratio: 2.197996e-01	ci left: 1.862260e-04	ci right 2.328185e-04	k: 317	n:1520000
SCN5A   1520000 perm   1255 sec   (1211 perm/sec)   p_kst 2.085526e-04   p_cons 2.612303e-01   p_joint 2.085526e-04

Joint ci ratio: 2.191117e-01	ci left: 1.862442e-04	ci right 2.326758e-04	k: 319	n:1530000
Cons ci ratio: 5.329787e-03	ci left: 2.605099e-01	ci right 2.619027e-01	k: 399645	n:1530000
KS ci ratio: 2.191117e-01	ci left: 1.862442e-04	ci right 2.326758e-04	k: 319	n:1530000
SCN5A   1530000 perm   1269 sec   (1205 perm/sec)   p_kst 2.084967e-04   p_cons 2.612059e-01   p_joint 2.084967e-04

Joint ci ratio: 2.184301e-01	ci left: 1.862623e-04	ci right 2.325346e-04	k: 321	n:1540000
Cons ci ratio: 5.311623e-03	ci left: 2.605725e-01	ci right 2.619609e-01	k: 402350	n:1540000
KS ci ratio: 2.184301e-01	ci left: 1.862623e-04	ci right 2.325346e-04	k: 321	n:1540000
SCN5A   1540000 perm   1284 sec   (1200 perm/sec)   p_kst 2.084416e-04   p_cons 2.612662e-01   p_joint 2.084416e-04

Joint ci ratio: 2.174196e-01	ci left: 1.868905e-04	ci right 2.330754e-04	k: 324	n:1550000
Cons ci ratio: 5.294166e-03	ci left: 2.605962e-01	ci right 2.619801e-01	k: 404996	n:1550000
KS ci ratio: 2.174196e-01	ci left: 1.868905e-04	ci right 2.330754e-04	k: 324	n:1550000
SCN5A   1550000 perm   1298 sec   (1194 perm/sec)   p_kst 2.090323e-04   p_cons 2.612877e-01   p_joint 2.090323e-04

Joint ci ratio: 2.164230e-01	ci left: 1.875111e-04	ci right 2.336087e-04	k: 327	n:1560000
Cons ci ratio: 5.277152e-03	ci left: 2.605998e-01	ci right 2.619793e-01	k: 407611	n:1560000
KS ci ratio: 2.164230e-01	ci left: 1.875111e-04	ci right 2.336087e-04	k: 327	n:1560000
SCN5A   1560000 perm   1312 sec   (1189 perm/sec)   p_kst 2.096154e-04   p_cons 2.612891e-01   p_joint 2.096154e-04

Joint ci ratio: 2.154399e-01	ci left: 1.881242e-04	ci right 2.341347e-04	k: 330	n:1570000
Cons ci ratio: 5.259988e-03	ci left: 2.606263e-01	ci right 2.620014e-01	k: 410262	n:1570000
KS ci ratio: 2.154399e-01	ci left: 1.881242e-04	ci right 2.341347e-04	k: 330	n:1570000
SCN5A   1570000 perm   1326 sec   (1184 perm/sec)   p_kst 2.101911e-04   p_cons 2.613134e-01   p_joint 2.101911e-04

Joint ci ratio: 2.151153e-01	ci left: 1.875324e-04	ci right 2.333199e-04	k: 331	n:1580000
Cons ci ratio: 5.243275e-03	ci left: 2.606315e-01	ci right 2.620023e-01	k: 412880	n:1580000
KS ci ratio: 2.151153e-01	ci left: 1.875324e-04	ci right 2.333199e-04	k: 331	n:1580000
SCN5A   1580000 perm   1340 sec   (1179 perm/sec)   p_kst 2.094937e-04   p_cons 2.613165e-01   p_joint 2.094937e-04

Joint ci ratio: 2.141498e-01	ci left: 1.881383e-04	ci right 2.338405e-04	k: 334	n:1590000
Cons ci ratio: 5.226804e-03	ci left: 2.606304e-01	ci right 2.619969e-01	k: 415488	n:1590000
KS ci ratio: 2.141498e-01	ci left: 1.881383e-04	ci right 2.338405e-04	k: 334	n:1590000
SCN5A   1590000 perm   1355 sec   (1173 perm/sec)   p_kst 2.100629e-04   p_cons 2.613132e-01   p_joint 2.100629e-04

Joint ci ratio: 2.138310e-01	ci left: 1.875539e-04	ci right 2.330374e-04	k: 335	n:1600000
Cons ci ratio: 5.210969e-03	ci left: 2.605938e-01	ci right 2.619559e-01	k: 418039	n:1600000
KS ci ratio: 2.138310e-01	ci left: 1.875539e-04	ci right 2.330374e-04	k: 335	n:1600000
SCN5A   1600000 perm   1370 sec   (1168 perm/sec)   p_kst 2.093750e-04   p_cons 2.612744e-01   p_joint 2.093750e-04

Joint ci ratio: 2.122574e-01	ci left: 1.893289e-04	ci right 2.348610e-04	k: 340	n:1610000
Cons ci ratio: 5.194725e-03	ci left: 2.605985e-01	ci right 2.619564e-01	k: 420656	n:1610000
KS ci ratio: 2.122574e-01	ci left: 1.893289e-04	ci right 2.348610e-04	k: 340	n:1610000
SCN5A   1610000 perm   1384 sec   (1163 perm/sec)   p_kst 2.111801e-04   p_cons 2.612770e-01   p_joint 2.111801e-04

Joint ci ratio: 2.119469e-01	ci left: 1.887447e-04	ci right 2.340613e-04	k: 341	n:1620000
Cons ci ratio: 5.178931e-03	ci left: 2.605810e-01	ci right 2.619346e-01	k: 423237	n:1620000
KS ci ratio: 2.119469e-01	ci left: 1.887447e-04	ci right 2.340613e-04	k: 341	n:1620000
SCN5A   1620000 perm   1399 sec   (1158 perm/sec)   p_kst 2.104938e-04   p_cons 2.612574e-01   p_joint 2.104938e-04

Joint ci ratio: 2.116378e-01	ci left: 1.881677e-04	ci right 2.332713e-04	k: 342	n:1630000
Cons ci ratio: 5.162639e-03	ci left: 2.606116e-01	ci right 2.619611e-01	k: 425896	n:1630000
KS ci ratio: 2.116378e-01	ci left: 1.881677e-04	ci right 2.332713e-04	k: 342	n:1630000
SCN5A   1630000 perm   1414 sec   (1153 perm/sec)   p_kst 2.098160e-04   p_cons 2.612859e-01   p_joint 2.098160e-04

Joint ci ratio: 2.113300e-01	ci left: 1.875978e-04	ci right 2.324909e-04	k: 343	n:1640000
Cons ci ratio: 5.147012e-03	ci left: 2.606033e-01	ci right 2.619487e-01	k: 428492	n:1640000
KS ci ratio: 2.113300e-01	ci left: 1.875978e-04	ci right 2.324909e-04	k: 343	n:1640000
SCN5A   1640000 perm   1429 sec   (1148 perm/sec)   p_kst 2.091463e-04   p_cons 2.612756e-01   p_joint 2.091463e-04

Joint ci ratio: 2.101118e-01	ci left: 1.887572e-04	ci right 2.336339e-04	k: 347	n:1650000
Cons ci ratio: 5.131075e-03	ci left: 2.606291e-01	ci right 2.619705e-01	k: 431144	n:1650000
KS ci ratio: 2.101118e-01	ci left: 1.887572e-04	ci right 2.336339e-04	k: 347	n:1650000
SCN5A   1650000 perm   1444 sec   (1143 perm/sec)   p_kst 2.103030e-04   p_cons 2.612994e-01   p_joint 2.103030e-04

Joint ci ratio: 2.092119e-01	ci left: 1.893324e-04	ci right 2.341284e-04	k: 350	n:1660000
Cons ci ratio: 5.115924e-03	ci left: 2.606065e-01	ci right 2.619437e-01	k: 433716	n:1660000
KS ci ratio: 2.092119e-01	ci left: 1.893324e-04	ci right 2.341284e-04	k: 350	n:1660000
SCN5A   1660000 perm   1459 sec   (1138 perm/sec)   p_kst 2.108434e-04   p_cons 2.612747e-01   p_joint 2.108434e-04

Joint ci ratio: 2.083235e-01	ci left: 1.899012e-04	ci right 2.346166e-04	k: 353	n:1670000
Cons ci ratio: 5.100661e-03	ci left: 2.606027e-01	ci right 2.619359e-01	k: 436319	n:1670000
KS ci ratio: 2.083235e-01	ci left: 1.899012e-04	ci right 2.346166e-04	k: 353	n:1670000
SCN5A   1670000 perm   1474 sec   (1133 perm/sec)   p_kst 2.113772e-04   p_cons 2.612689e-01   p_joint 2.113772e-04

Joint ci ratio: 2.077375e-01	ci left: 1.898993e-04	ci right 2.344725e-04	k: 355	n:1680000
Cons ci ratio: 5.085793e-03	ci left: 2.605793e-01	ci right 2.619085e-01	k: 438889	n:1680000
KS ci ratio: 2.077375e-01	ci left: 1.898993e-04	ci right 2.344725e-04	k: 355	n:1680000
SCN5A   1680000 perm   1490 sec   (1128 perm/sec)   p_kst 2.113095e-04   p_cons 2.612435e-01   p_joint 2.113095e-04

Joint ci ratio: 2.071564e-01	ci left: 1.898976e-04	ci right 2.343299e-04	k: 357	n:1690000
Cons ci ratio: 5.070797e-03	ci left: 2.605757e-01	ci right 2.619009e-01	k: 441492	n:1690000
KS ci ratio: 2.071564e-01	ci left: 1.898976e-04	ci right 2.343299e-04	k: 357	n:1690000
SCN5A   1690000 perm   1505 sec   (1123 perm/sec)   p_kst 2.112426e-04   p_cons 2.612379e-01   p_joint 2.112426e-04

Joint ci ratio: 2.057246e-01	ci left: 1.915697e-04	ci right 2.360445e-04	k: 362	n:1700000
Cons ci ratio: 5.055772e-03	ci left: 2.605844e-01	ci right 2.619058e-01	k: 444116	n:1700000
KS ci ratio: 2.057246e-01	ci left: 1.915697e-04	ci right 2.360445e-04	k: 362	n:1700000
SCN5A   1700000 perm   1520 sec   (1118 perm/sec)   p_kst 2.129412e-04   p_cons 2.612447e-01   p_joint 2.129412e-04

Joint ci ratio: 2.046003e-01	ci left: 1.926685e-04	ci right 2.371233e-04	k: 366	n:1710000
Cons ci ratio: 5.041437e-03	ci left: 2.605505e-01	ci right 2.618679e-01	k: 446667	n:1710000
KS ci ratio: 2.046003e-01	ci left: 1.926685e-04	ci right 2.371233e-04	k: 366	n:1710000
SCN5A   1710000 perm   1535 sec   (1114 perm/sec)   p_kst 2.140351e-04   p_cons 2.612088e-01   p_joint 2.140351e-04

Joint ci ratio: 2.040451e-01	ci left: 1.926516e-04	ci right 2.369669e-04	k: 368	n:1720000
Cons ci ratio: 5.026511e-03	ci left: 2.605715e-01	ci right 2.618851e-01	k: 449312	n:1720000
KS ci ratio: 2.040451e-01	ci left: 1.926516e-04	ci right 2.369669e-04	k: 368	n:1720000
SCN5A   1720000 perm   1551 sec   (1109 perm/sec)   p_kst 2.139535e-04   p_cons 2.612279e-01   p_joint 2.139535e-04

Joint ci ratio: 2.037692e-01	ci left: 1.920865e-04	ci right 2.362046e-04	k: 369	n:1730000
Cons ci ratio: 5.011274e-03	ci left: 2.606264e-01	ci right 2.619363e-01	k: 452016	n:1730000
KS ci ratio: 2.037692e-01	ci left: 1.920865e-04	ci right 2.362046e-04	k: 369	n:1730000
SCN5A   1730000 perm   1567 sec   (1104 perm/sec)   p_kst 2.132948e-04   p_cons 2.612809e-01   p_joint 2.132948e-04

Joint ci ratio: 2.037694e-01	ci left: 1.909826e-04	ci right 2.348471e-04	k: 369	n:1740000
Cons ci ratio: 4.996472e-03	ci left: 2.606577e-01	ci right 2.619638e-01	k: 454680	n:1740000
KS ci ratio: 2.037694e-01	ci left: 1.909826e-04	ci right 2.348471e-04	k: 369	n:1740000
SCN5A   1740000 perm   1582 sec   (1100 perm/sec)   p_kst 2.120690e-04   p_cons 2.613103e-01   p_joint 2.120690e-04

Joint ci ratio: 2.034946e-01	ci left: 1.904335e-04	ci right 2.341057e-04	k: 370	n:1750000
Cons ci ratio: 4.982678e-03	ci left: 2.606206e-01	ci right 2.619230e-01	k: 457225	n:1750000
KS ci ratio: 2.034946e-01	ci left: 1.904335e-04	ci right 2.341057e-04	k: 370	n:1750000
SCN5A   1750000 perm   1598 sec   (1095 perm/sec)   p_kst 2.114286e-04   p_cons 2.612714e-01   p_joint 2.114286e-04

Joint ci ratio: 2.026768e-01	ci left: 1.909694e-04	ci right 2.345667e-04	k: 373	n:1760000
Cons ci ratio: 4.969020e-03	ci left: 2.605823e-01	ci right 2.618809e-01	k: 459767	n:1760000
KS ci ratio: 2.026768e-01	ci left: 1.909694e-04	ci right 2.345667e-04	k: 373	n:1760000
SCN5A   1760000 perm   1614 sec   (1091 perm/sec)   p_kst 2.119318e-04   p_cons 2.612313e-01   p_joint 2.119318e-04

Joint ci ratio: 2.021370e-01	ci left: 1.909631e-04	ci right 2.344286e-04	k: 375	n:1770000
Cons ci ratio: 4.954270e-03	ci left: 2.606382e-01	ci right 2.619332e-01	k: 462475	n:1770000
KS ci ratio: 2.021370e-01	ci left: 1.909631e-04	ci right 2.344286e-04	k: 375	n:1770000
SCN5A   1770000 perm   1630 sec   (1086 perm/sec)   p_kst 2.118644e-04   p_cons 2.612853e-01   p_joint 2.118644e-04

Joint ci ratio: 2.013354e-01	ci left: 1.914906e-04	ci right 2.348819e-04	k: 378	n:1780000
Cons ci ratio: 4.940275e-03	ci left: 2.606446e-01	ci right 2.619360e-01	k: 465096	n:1780000
KS ci ratio: 2.013354e-01	ci left: 1.914906e-04	ci right 2.348819e-04	k: 378	n:1780000
SCN5A   1780000 perm   1645 sec   (1082 perm/sec)   p_kst 2.123596e-04   p_cons 2.612899e-01   p_joint 2.123596e-04

Joint ci ratio: 2.010704e-01	ci left: 1.909513e-04	ci right 2.341565e-04	k: 379	n:1790000
Cons ci ratio: 4.926997e-03	ci left: 2.606040e-01	ci right 2.618917e-01	k: 467633	n:1790000
KS ci ratio: 2.010704e-01	ci left: 1.909513e-04	ci right 2.341565e-04	k: 379	n:1790000
SCN5A   1790000 perm   1662 sec   (1077 perm/sec)   p_kst 2.117318e-04   p_cons 2.612475e-01   p_joint 2.117318e-04

Joint ci ratio: 2.002813e-01	ci left: 1.914734e-04	ci right 2.346060e-04	k: 382	n:1800000
Cons ci ratio: 4.912998e-03	ci left: 2.606289e-01	ci right 2.619130e-01	k: 470287	n:1800000
KS ci ratio: 2.002813e-01	ci left: 1.914734e-04	ci right 2.346060e-04	k: 382	n:1800000
SCN5A   1800000 perm   1677 sec   (1073 perm/sec)   p_kst 2.122222e-04   p_cons 2.612706e-01   p_joint 2.122222e-04

Joint ci ratio: 1.995014e-01	ci left: 1.919900e-04	ci right 2.350501e-04	k: 385	n:1810000
Cons ci ratio: 4.898873e-03	ci left: 2.606728e-01	ci right 2.619534e-01	k: 472976	n:1810000
KS ci ratio: 1.995014e-01	ci left: 1.919900e-04	ci right 2.350501e-04	k: 385	n:1810000
SCN5A   1810000 perm   1693 sec   (1069 perm/sec)   p_kst 2.127072e-04   p_cons 2.613127e-01   p_joint 2.127072e-04

Joint ci ratio: 1.995015e-01	ci left: 1.909351e-04	ci right 2.337586e-04	k: 385	n:1820000
Cons ci ratio: 4.885279e-03	ci left: 2.606838e-01	ci right 2.619609e-01	k: 475606	n:1820000
KS ci ratio: 1.995015e-01	ci left: 1.909351e-04	ci right 2.337586e-04	k: 385	n:1820000
SCN5A   1820000 perm   1709 sec   (1065 perm/sec)   p_kst 2.115385e-04   p_cons 2.613220e-01   p_joint 2.115385e-04

Joint ci ratio: 1.987307e-01	ci left: 1.914494e-04	ci right 2.342022e-04	k: 388	n:1830000
Cons ci ratio: 4.871700e-03	ci left: 2.607023e-01	ci right 2.619760e-01	k: 478250	n:1830000
KS ci ratio: 1.987307e-01	ci left: 1.914494e-04	ci right 2.342022e-04	k: 388	n:1830000
SCN5A   1830000 perm   1725 sec   (1061 perm/sec)   p_kst 2.120219e-04   p_cons 2.613388e-01   p_joint 2.120219e-04

Joint ci ratio: 1.979688e-01	ci left: 1.919584e-04	ci right 2.346407e-04	k: 391	n:1840000
Cons ci ratio: 4.858337e-03	ci left: 2.607125e-01	ci right 2.619828e-01	k: 480879	n:1840000
KS ci ratio: 1.979688e-01	ci left: 1.919584e-04	ci right 2.346407e-04	k: 391	n:1840000
SCN5A   1840000 perm   1741 sec   (1057 perm/sec)   p_kst 2.125000e-04   p_cons 2.613473e-01   p_joint 2.125000e-04

Joint ci ratio: 1.962242e-01	ci left: 1.945179e-04	ci right 2.373426e-04	k: 398	n:1850000
Cons ci ratio: 4.845090e-03	ci left: 2.607221e-01	ci right 2.619889e-01	k: 483507	n:1850000
KS ci ratio: 1.962242e-01	ci left: 1.945179e-04	ci right 2.373426e-04	k: 398	n:1850000
SCN5A   1850000 perm   1758 sec   (1052 perm/sec)   p_kst 2.151351e-04   p_cons 2.613551e-01   p_joint 2.151351e-04

Joint ci ratio: 1.954906e-01	ci left: 1.950059e-04	ci right 2.377584e-04	k: 401	n:1860000
Cons ci ratio: 4.832045e-03	ci left: 2.607240e-01	ci right 2.619874e-01	k: 486121	n:1860000
KS ci ratio: 1.954906e-01	ci left: 1.950059e-04	ci right 2.377584e-04	k: 401	n:1860000
SCN5A   1860000 perm   1774 sec   (1049 perm/sec)   p_kst 2.155914e-04   p_cons 2.613554e-01   p_joint 2.155914e-04

Joint ci ratio: 1.950062e-01	ci left: 1.949803e-04	ci right 2.376087e-04	k: 403	n:1870000
Cons ci ratio: 4.819065e-03	ci left: 2.607292e-01	ci right 2.619892e-01	k: 488741	n:1870000
KS ci ratio: 1.950062e-01	ci left: 1.949803e-04	ci right 2.376087e-04	k: 403	n:1870000
SCN5A   1870000 perm   1790 sec   (1045 perm/sec)   p_kst 2.155080e-04   p_cons 2.613588e-01   p_joint 2.155080e-04

Joint ci ratio: 1.945253e-01	ci left: 1.949551e-04	ci right 2.374605e-04	k: 405	n:1880000
Cons ci ratio: 4.806348e-03	ci left: 2.607215e-01	ci right 2.619782e-01	k: 491337	n:1880000
KS ci ratio: 1.945253e-01	ci left: 1.949551e-04	ci right 2.374605e-04	k: 405	n:1880000
SCN5A   1880000 perm   1806 sec   (1041 perm/sec)   p_kst 2.154255e-04   p_cons 2.613495e-01   p_joint 2.154255e-04

Joint ci ratio: 1.940479e-01	ci left: 1.949304e-04	ci right 2.373137e-04	k: 407	n:1890000
Cons ci ratio: 4.793218e-03	ci left: 2.607552e-01	ci right 2.620085e-01	k: 494011	n:1890000
KS ci ratio: 1.940479e-01	ci left: 1.949304e-04	ci right 2.373137e-04	k: 407	n:1890000
SCN5A   1890000 perm   1823 sec   (1037 perm/sec)   p_kst 2.153439e-04   p_cons 2.613815e-01   p_joint 2.153439e-04

Joint ci ratio: 1.938106e-01	ci left: 1.944052e-04	ci right 2.366165e-04	k: 408	n:1900000
Cons ci ratio: 4.780593e-03	ci left: 2.607564e-01	ci right 2.620064e-01	k: 496624	n:1900000
KS ci ratio: 1.938106e-01	ci left: 1.944052e-04	ci right 2.366165e-04	k: 408	n:1900000
SCN5A   1900000 perm   1840 sec   (1033 perm/sec)   p_kst 2.147368e-04   p_cons 2.613811e-01   p_joint 2.147368e-04

Joint ci ratio: 1.935742e-01	ci left: 1.938855e-04	ci right 2.359266e-04	k: 409	n:1910000
Cons ci ratio: 4.768178e-03	ci left: 2.607487e-01	ci right 2.619955e-01	k: 499220	n:1910000
KS ci ratio: 1.935742e-01	ci left: 1.938855e-04	ci right 2.359266e-04	k: 409	n:1910000
SCN5A   1910000 perm   1857 sec   (1029 perm/sec)   p_kst 2.141361e-04   p_cons 2.613717e-01   p_joint 2.141361e-04

Joint ci ratio: 1.935743e-01	ci left: 1.928757e-04	ci right 2.346978e-04	k: 409	n:1920000
Cons ci ratio: 4.755794e-03	ci left: 2.607463e-01	ci right 2.619898e-01	k: 501826	n:1920000
KS ci ratio: 1.935743e-01	ci left: 1.928757e-04	ci right 2.346978e-04	k: 409	n:1920000
SCN5A   1920000 perm   1874 sec   (1025 perm/sec)   p_kst 2.130208e-04   p_cons 2.613677e-01   p_joint 2.130208e-04

Joint ci ratio: 1.926368e-01	ci left: 1.938487e-04	ci right 2.356544e-04	k: 413	n:1930000
Cons ci ratio: 4.743525e-03	ci left: 2.607424e-01	ci right 2.619827e-01	k: 504429	n:1930000
KS ci ratio: 1.926368e-01	ci left: 1.938487e-04	ci right 2.356544e-04	k: 413	n:1930000
SCN5A   1930000 perm   1891 sec   (1021 perm/sec)   p_kst 2.139896e-04   p_cons 2.613622e-01   p_joint 2.139896e-04

Joint ci ratio: 1.924046e-01	ci left: 1.933401e-04	ci right 2.349800e-04	k: 414	n:1940000
Cons ci ratio: 4.731111e-03	ci left: 2.607581e-01	ci right 2.619952e-01	k: 507070	n:1940000
KS ci ratio: 1.924046e-01	ci left: 1.933401e-04	ci right 2.349800e-04	k: 414	n:1940000
SCN5A   1940000 perm   1907 sec   (1017 perm/sec)   p_kst 2.134021e-04   p_cons 2.613763e-01   p_joint 2.134021e-04

Joint ci ratio: 1.917129e-01	ci left: 1.938131e-04	ci right 2.353873e-04	k: 417	n:1950000
Cons ci ratio: 4.718725e-03	ci left: 2.607793e-01	ci right 2.620132e-01	k: 509722	n:1950000
KS ci ratio: 1.917129e-01	ci left: 1.938131e-04	ci right 2.353873e-04	k: 417	n:1950000
SCN5A   1950000 perm   1924 sec   (1013 perm/sec)   p_kst 2.138462e-04   p_cons 2.613959e-01   p_joint 2.138462e-04

Joint ci ratio: 1.912559e-01	ci left: 1.937957e-04	ci right 2.352556e-04	k: 419	n:1960000
Cons ci ratio: 4.706373e-03	ci left: 2.608053e-01	ci right 2.620362e-01	k: 512384	n:1960000
KS ci ratio: 1.912559e-01	ci left: 1.937957e-04	ci right 2.352556e-04	k: 419	n:1960000
SCN5A   1960000 perm   1942 sec   (1009 perm/sec)   p_kst 2.137755e-04   p_cons 2.614204e-01   p_joint 2.137755e-04

Joint ci ratio: 1.903515e-01	ci left: 1.947455e-04	ci right 2.361887e-04	k: 423	n:1970000
Cons ci ratio: 4.694445e-03	ci left: 2.608043e-01	ci right 2.620320e-01	k: 514993	n:1970000
KS ci ratio: 1.903515e-01	ci left: 1.947455e-04	ci right 2.361887e-04	k: 423	n:1970000
SCN5A   1970000 perm   1959 sec   (1005 perm/sec)   p_kst 2.147208e-04   p_cons 2.614178e-01   p_joint 2.147208e-04

Joint ci ratio: 1.903516e-01	ci left: 1.937619e-04	ci right 2.349959e-04	k: 423	n:1980000
Cons ci ratio: 4.681915e-03	ci left: 2.608602e-01	ci right 2.620849e-01	k: 517715	n:1980000
KS ci ratio: 1.903516e-01	ci left: 1.937619e-04	ci right 2.349959e-04	k: 423	n:1980000
SCN5A   1980000 perm   1977 sec   (1002 perm/sec)   p_kst 2.136364e-04   p_cons 2.614722e-01   p_joint 2.136364e-04

Joint ci ratio: 1.892389e-01	ci left: 1.951814e-04	ci right 2.364468e-04	k: 428	n:1990000
Cons ci ratio: 4.670050e-03	ci left: 2.608689e-01	ci right 2.620905e-01	k: 520344	n:1990000
KS ci ratio: 1.892389e-01	ci left: 1.951814e-04	ci right 2.364468e-04	k: 428	n:1990000
SCN5A   1990000 perm   1994 sec   (998 perm/sec)   p_kst 2.150754e-04   p_cons 2.614794e-01   p_joint 2.150754e-04

Joint ci ratio: 1.892390e-01	ci left: 1.942055e-04	ci right 2.352645e-04	k: 428	n:2000000
Cons ci ratio: 4.658407e-03	ci left: 2.608666e-01	ci right 2.620851e-01	k: 522951	n:2000000
KS ci ratio: 1.892390e-01	ci left: 1.942055e-04	ci right 2.352645e-04	k: 428	n:2000000
SCN5A   2000000 perm   2011 sec   (994 perm/sec)   p_kst 2.140000e-04   p_cons 2.614755e-01   p_joint 2.140000e-04

Joint ci ratio: 1.892391e-01	ci left: 1.932393e-04	ci right 2.340941e-04	k: 428	n:2010000
Cons ci ratio: 4.646731e-03	ci left: 2.608742e-01	ci right 2.620897e-01	k: 525578	n:2010000
KS ci ratio: 1.892391e-01	ci left: 1.932393e-04	ci right 2.340941e-04	k: 428	n:2010000
SCN5A   2010000 perm   2029 sec   (990 perm/sec)   p_kst 2.129353e-04   p_cons 2.614816e-01   p_joint 2.129353e-04

Joint ci ratio: 1.883629e-01	ci left: 1.941693e-04	ci right 2.350089e-04	k: 432	n:2020000
Cons ci ratio: 4.634596e-03	ci left: 2.609272e-01	ci right 2.621398e-01	k: 528297	n:2020000
KS ci ratio: 1.883629e-01	ci left: 1.941693e-04	ci right 2.350089e-04	k: 432	n:2020000
SCN5A   2020000 perm   2047 sec   (987 perm/sec)   p_kst 2.138614e-04   p_cons 2.615332e-01   p_joint 2.138614e-04

Joint ci ratio: 1.881459e-01	ci left: 1.936822e-04	ci right 2.343670e-04	k: 433	n:2030000
Cons ci ratio: 4.623004e-03	ci left: 2.609423e-01	ci right 2.621519e-01	k: 530940	n:2030000
KS ci ratio: 1.881459e-01	ci left: 1.936822e-04	ci right 2.343670e-04	k: 433	n:2030000
SCN5A   2030000 perm   2064 sec   (983 perm/sec)   p_kst 2.133005e-04   p_cons 2.615468e-01   p_joint 2.133005e-04

Joint ci ratio: 1.881460e-01	ci left: 1.927327e-04	ci right 2.332182e-04	k: 433	n:2040000
Cons ci ratio: 4.611363e-03	ci left: 2.609686e-01	ci right 2.621752e-01	k: 533606	n:2040000
KS ci ratio: 1.881460e-01	ci left: 1.927327e-04	ci right 2.332182e-04	k: 433	n:2040000
SCN5A   2040000 perm   2082 sec   (980 perm/sec)   p_kst 2.122549e-04   p_cons 2.615716e-01   p_joint 2.122549e-04

Joint ci ratio: 1.879296e-01	ci left: 1.922574e-04	ci right 2.325913e-04	k: 434	n:2050000
Cons ci ratio: 4.600211e-03	ci left: 2.609609e-01	ci right 2.621646e-01	k: 536203	n:2050000
KS ci ratio: 1.879296e-01	ci left: 1.922574e-04	ci right 2.325913e-04	k: 434	n:2050000
SCN5A   2050000 perm   2100 sec   (976 perm/sec)   p_kst 2.117073e-04   p_cons 2.615624e-01   p_joint 2.117073e-04

Joint ci ratio: 1.879297e-01	ci left: 1.913241e-04	ci right 2.314622e-04	k: 434	n:2060000
Cons ci ratio: 4.589457e-03	ci left: 2.609267e-01	ci right 2.621274e-01	k: 538745	n:2060000
KS ci ratio: 1.879297e-01	ci left: 1.913241e-04	ci right 2.314622e-04	k: 434	n:2060000
SCN5A   2060000 perm   2118 sec   (973 perm/sec)   p_kst 2.106796e-04   p_cons 2.615267e-01   p_joint 2.106796e-04

Joint ci ratio: 1.872850e-01	ci left: 1.917811e-04	ci right 2.318613e-04	k: 437	n:2070000
Cons ci ratio: 4.578325e-03	ci left: 2.609309e-01	ci right 2.621287e-01	k: 541366	n:2070000
KS ci ratio: 1.872850e-01	ci left: 1.917811e-04	ci right 2.318613e-04	k: 437	n:2070000
SCN5A   2070000 perm   2137 sec   (969 perm/sec)   p_kst 2.111111e-04   p_cons 2.615295e-01   p_joint 2.111111e-04

Joint ci ratio: 1.872851e-01	ci left: 1.908590e-04	ci right 2.307466e-04	k: 437	n:2080000
Cons ci ratio: 4.566824e-03	ci left: 2.609730e-01	ci right 2.621680e-01	k: 544066	n:2080000
KS ci ratio: 1.872851e-01	ci left: 1.908590e-04	ci right 2.307466e-04	k: 437	n:2080000
SCN5A   2080000 perm   2155 sec   (965 perm/sec)   p_kst 2.100962e-04   p_cons 2.615702e-01   p_joint 2.100962e-04

Joint ci ratio: 1.870717e-01	ci left: 1.904019e-04	ci right 2.301434e-04	k: 438	n:2090000
Cons ci ratio: 4.556189e-03	ci left: 2.609488e-01	ci right 2.621409e-01	k: 546628	n:2090000
KS ci ratio: 1.870717e-01	ci left: 1.904019e-04	ci right 2.301434e-04	k: 438	n:2090000
SCN5A   2090000 perm   2173 sec   (962 perm/sec)   p_kst 2.095694e-04   p_cons 2.615445e-01   p_joint 2.095694e-04

Joint ci ratio: 1.868590e-01	ci left: 1.899491e-04	ci right 2.295459e-04	k: 439	n:2100000
Cons ci ratio: 4.545566e-03	ci left: 2.609300e-01	ci right 2.621192e-01	k: 549201	n:2100000
KS ci ratio: 1.868590e-01	ci left: 1.899491e-04	ci right 2.295459e-04	k: 439	n:2100000
SCN5A   2100000 perm   2191 sec   (958 perm/sec)   p_kst 2.090476e-04   p_cons 2.615243e-01   p_joint 2.090476e-04

Joint ci ratio: 1.864358e-01	ci left: 1.899524e-04	ci right 2.294501e-04	k: 441	n:2110000
Cons ci ratio: 4.534783e-03	ci left: 2.609313e-01	ci right 2.621177e-01	k: 551816	n:2110000
KS ci ratio: 1.864358e-01	ci left: 1.899524e-04	ci right 2.294501e-04	k: 441	n:2110000
SCN5A   2110000 perm   2210 sec   (955 perm/sec)   p_kst 2.090047e-04   p_cons 2.615242e-01   p_joint 2.090047e-04

Joint ci ratio: 1.851830e-01	ci left: 1.917550e-04	ci right 2.313295e-04	k: 447	n:2120000
Cons ci ratio: 4.523944e-03	ci left: 2.609439e-01	ci right 2.621275e-01	k: 554455	n:2120000
KS ci ratio: 1.851830e-01	ci left: 1.917550e-04	ci right 2.313295e-04	k: 447	n:2120000
SCN5A   2120000 perm   2228 sec   (952 perm/sec)   p_kst 2.108491e-04   p_cons 2.615354e-01   p_joint 2.108491e-04

Joint ci ratio: 1.841580e-01	ci left: 1.930937e-04	ci right 2.326992e-04	k: 452	n:2130000
Cons ci ratio: 4.513072e-03	ci left: 2.609658e-01	ci right 2.621466e-01	k: 557114	n:2130000
KS ci ratio: 1.841580e-01	ci left: 1.930937e-04	ci right 2.326992e-04	k: 452	n:2130000
SCN5A   2130000 perm   2246 sec   (948 perm/sec)   p_kst 2.122066e-04   p_cons 2.615559e-01   p_joint 2.122066e-04

Joint ci ratio: 1.831499e-01	ci left: 1.944204e-04	ci right 2.340556e-04	k: 457	n:2140000
Cons ci ratio: 4.502273e-03	ci left: 2.609879e-01	ci right 2.621660e-01	k: 559774	n:2140000
KS ci ratio: 1.831499e-01	ci left: 1.944204e-04	ci right 2.340556e-04	k: 457	n:2140000
SCN5A   2140000 perm   2264 sec   (945 perm/sec)   p_kst 2.135514e-04   p_cons 2.615766e-01   p_joint 2.135514e-04

Joint ci ratio: 1.829504e-01	ci left: 1.939599e-04	ci right 2.334533e-04	k: 458	n:2150000
Cons ci ratio: 4.491741e-03	ci left: 2.609936e-01	ci right 2.621690e-01	k: 562399	n:2150000
KS ci ratio: 1.829504e-01	ci left: 1.939599e-04	ci right 2.334533e-04	k: 458	n:2150000
SCN5A   2150000 perm   2282 sec   (942 perm/sec)   p_kst 2.130233e-04   p_cons 2.615809e-01   p_joint 2.130233e-04

Joint ci ratio: 1.827514e-01	ci left: 1.935037e-04	ci right 2.328567e-04	k: 459	n:2160000
Cons ci ratio: 4.481448e-03	ci left: 2.609848e-01	ci right 2.621575e-01	k: 564993	n:2160000
KS ci ratio: 1.827514e-01	ci left: 1.935037e-04	ci right 2.328567e-04	k: 459	n:2160000
SCN5A   2160000 perm   2301 sec   (939 perm/sec)   p_kst 2.125000e-04   p_cons 2.615708e-01   p_joint 2.125000e-04

Joint ci ratio: 1.823554e-01	ci left: 1.934916e-04	ci right 2.327473e-04	k: 461	n:2170000
Cons ci ratio: 4.471082e-03	ci left: 2.609886e-01	ci right 2.621586e-01	k: 567614	n:2170000
KS ci ratio: 1.823554e-01	ci left: 1.934916e-04	ci right 2.327473e-04	k: 461	n:2170000
SCN5A   2170000 perm   2321 sec   (935 perm/sec)   p_kst 2.124424e-04   p_cons 2.615733e-01   p_joint 2.124424e-04

Joint ci ratio: 1.817662e-01	ci left: 1.939174e-04	ci right 2.331185e-04	k: 464	n:2180000
Cons ci ratio: 4.461010e-03	ci left: 2.609731e-01	ci right 2.621404e-01	k: 570193	n:2180000
KS ci ratio: 1.817662e-01	ci left: 1.939174e-04	ci right 2.331185e-04	k: 464	n:2180000
SCN5A   2180000 perm   2340 sec   (931 perm/sec)   p_kst 2.128440e-04   p_cons 2.615564e-01   p_joint 2.128440e-04

Joint ci ratio: 1.811827e-01	ci left: 1.943396e-04	ci right 2.334860e-04	k: 467	n:2190000
Cons ci ratio: 4.450648e-03	ci left: 2.609888e-01	ci right 2.621534e-01	k: 572840	n:2190000
KS ci ratio: 1.811827e-01	ci left: 1.943396e-04	ci right 2.334860e-04	k: 467	n:2190000
SCN5A   2190000 perm   2360 sec   (928 perm/sec)   p_kst 2.132420e-04   p_cons 2.615708e-01   p_joint 2.132420e-04

Joint ci ratio: 1.807968e-01	ci left: 1.943241e-04	ci right 2.333750e-04	k: 469	n:2200000
Cons ci ratio: 4.440823e-03	ci left: 2.609639e-01	ci right 2.621258e-01	k: 575398	n:2200000
KS ci ratio: 1.807968e-01	ci left: 1.943241e-04	ci right 2.333750e-04	k: 469	n:2200000
SCN5A   2200000 perm   2379 sec   (925 perm/sec)   p_kst 2.131818e-04   p_cons 2.615445e-01   p_joint 2.131818e-04

Joint ci ratio: 1.804133e-01	ci left: 1.943089e-04	ci right 2.332648e-04	k: 471	n:2210000
Cons ci ratio: 4.430648e-03	ci left: 2.609754e-01	ci right 2.621347e-01	k: 578036	n:2210000
KS ci ratio: 1.804133e-01	ci left: 1.943089e-04	ci right 2.332648e-04	k: 471	n:2210000
SCN5A   2210000 perm   2399 sec   (921 perm/sec)   p_kst 2.131222e-04   p_cons 2.615548e-01   p_joint 2.131222e-04

Joint ci ratio: 1.804134e-01	ci left: 1.934336e-04	ci right 2.322141e-04	k: 471	n:2220000
Cons ci ratio: 4.420686e-03	ci left: 2.609742e-01	ci right 2.621309e-01	k: 580646	n:2220000
KS ci ratio: 1.804134e-01	ci left: 1.934336e-04	ci right 2.322141e-04	k: 471	n:2220000
SCN5A   2220000 perm   2418 sec   (918 perm/sec)   p_kst 2.121622e-04   p_cons 2.615523e-01   p_joint 2.121622e-04

Joint ci ratio: 1.802226e-01	ci left: 1.929944e-04	ci right 2.316414e-04	k: 472	n:2230000
Cons ci ratio: 4.410920e-03	ci left: 2.609618e-01	ci right 2.621159e-01	k: 583231	n:2230000
KS ci ratio: 1.802226e-01	ci left: 1.929944e-04	ci right 2.316414e-04	k: 472	n:2230000
SCN5A   2230000 perm   2438 sec   (915 perm/sec)   p_kst 2.116592e-04   p_cons 2.615386e-01   p_joint 2.116592e-04

Joint ci ratio: 1.798428e-01	ci left: 1.929854e-04	ci right 2.315403e-04	k: 474	n:2240000
Cons ci ratio: 4.400805e-03	ci left: 2.609857e-01	ci right 2.621372e-01	k: 585897	n:2240000
KS ci ratio: 1.798428e-01	ci left: 1.929854e-04	ci right 2.315403e-04	k: 474	n:2240000
SCN5A   2240000 perm   2458 sec   (911 perm/sec)   p_kst 2.116071e-04   p_cons 2.615612e-01   p_joint 2.116071e-04

Joint ci ratio: 1.792775e-01	ci left: 1.934011e-04	ci right 2.319045e-04	k: 477	n:2250000
Cons ci ratio: 4.390947e-03	ci left: 2.609929e-01	ci right 2.621419e-01	k: 588526	n:2250000
KS ci ratio: 1.792775e-01	ci left: 1.934011e-04	ci right 2.319045e-04	k: 477	n:2250000
SCN5A   2250000 perm   2477 sec   (908 perm/sec)   p_kst 2.120000e-04   p_cons 2.615671e-01   p_joint 2.120000e-04

Joint ci ratio: 1.792776e-01	ci left: 1.925454e-04	ci right 2.308784e-04	k: 477	n:2260000
Cons ci ratio: 4.381311e-03	ci left: 2.609864e-01	ci right 2.621328e-01	k: 591124	n:2260000
KS ci ratio: 1.792776e-01	ci left: 1.925454e-04	ci right 2.308784e-04	k: 477	n:2260000
SCN5A   2260000 perm   2497 sec   (905 perm/sec)   p_kst 2.110619e-04   p_cons 2.615593e-01   p_joint 2.110619e-04

Joint ci ratio: 1.789037e-01	ci left: 1.925387e-04	ci right 2.307818e-04	k: 479	n:2270000
Cons ci ratio: 4.371673e-03	ci left: 2.609856e-01	ci right 2.621295e-01	k: 593735	n:2270000
KS ci ratio: 1.789037e-01	ci left: 1.925387e-04	ci right 2.307818e-04	k: 479	n:2270000
SCN5A   2270000 perm   2517 sec   (902 perm/sec)   p_kst 2.110132e-04   p_cons 2.615573e-01   p_joint 2.110132e-04

Joint ci ratio: 1.785322e-01	ci left: 1.925322e-04	ci right 2.306860e-04	k: 481	n:2280000
Cons ci ratio: 4.361786e-03	ci left: 2.610125e-01	ci right 2.621539e-01	k: 596409	n:2280000
KS ci ratio: 1.785322e-01	ci left: 1.925322e-04	ci right 2.306860e-04	k: 481	n:2280000
SCN5A   2280000 perm   2536 sec   (899 perm/sec)   p_kst 2.109649e-04   p_cons 2.615829e-01   p_joint 2.109649e-04

Joint ci ratio: 1.779791e-01	ci left: 1.929431e-04	ci right 2.310470e-04	k: 484	n:2290000
Cons ci ratio: 4.352512e-03	ci left: 2.609907e-01	ci right 2.621296e-01	k: 598972	n:2290000
KS ci ratio: 1.779791e-01	ci left: 1.929431e-04	ci right 2.310470e-04	k: 484	n:2290000
SCN5A   2290000 perm   2556 sec   (896 perm/sec)   p_kst 2.113537e-04   p_cons 2.615598e-01   p_joint 2.113537e-04

Joint ci ratio: 1.779792e-01	ci left: 1.921042e-04	ci right 2.300425e-04	k: 484	n:2300000
Cons ci ratio: 4.342940e-03	ci left: 2.610008e-01	ci right 2.621372e-01	k: 601608	n:2300000
KS ci ratio: 1.779792e-01	ci left: 1.921042e-04	ci right 2.300425e-04	k: 484	n:2300000
SCN5A   2300000 perm   2575 sec   (893 perm/sec)   p_kst 2.104348e-04   p_cons 2.615687e-01   p_joint 2.104348e-04

Joint ci ratio: 1.779793e-01	ci left: 1.912725e-04	ci right 2.290467e-04	k: 484	n:2310000
Cons ci ratio: 4.333523e-03	ci left: 2.610026e-01	ci right 2.621365e-01	k: 604225	n:2310000
KS ci ratio: 1.779793e-01	ci left: 1.912725e-04	ci right 2.290467e-04	k: 484	n:2310000
SCN5A   2310000 perm   2595 sec   (890 perm/sec)   p_kst 2.095238e-04   p_cons 2.615693e-01   p_joint 2.095238e-04

Joint ci ratio: 1.770688e-01	ci left: 1.925075e-04	ci right 2.303102e-04	k: 489	n:2320000
Cons ci ratio: 4.324346e-03	ci left: 2.609884e-01	ci right 2.621199e-01	k: 606805	n:2320000
KS ci ratio: 1.770688e-01	ci left: 1.925075e-04	ci right 2.303102e-04	k: 489	n:2320000
SCN5A   2320000 perm   2614 sec   (887 perm/sec)   p_kst 2.107759e-04   p_cons 2.615539e-01   p_joint 2.107759e-04

Joint ci ratio: 1.763504e-01	ci left: 1.933221e-04	ci right 2.311143e-04	k: 493	n:2330000
Cons ci ratio: 4.315020e-03	ci left: 2.609929e-01	ci right 2.621219e-01	k: 609428	n:2330000
KS ci ratio: 1.763504e-01	ci left: 1.933221e-04	ci right 2.311143e-04	k: 493	n:2330000
SCN5A   2330000 perm   2634 sec   (884 perm/sec)   p_kst 2.115880e-04   p_cons 2.615571e-01   p_joint 2.115880e-04

Joint ci ratio: 1.756407e-01	ci left: 1.941301e-04	ci right 2.319113e-04	k: 497	n:2340000
Cons ci ratio: 4.306183e-03	ci left: 2.609588e-01	ci right 2.620854e-01	k: 611961	n:2340000
KS ci ratio: 1.756407e-01	ci left: 1.941301e-04	ci right 2.319113e-04	k: 497	n:2340000
SCN5A   2340000 perm   2654 sec   (882 perm/sec)   p_kst 2.123932e-04   p_cons 2.615218e-01   p_joint 2.123932e-04

Joint ci ratio: 1.751140e-01	ci left: 1.945245e-04	ci right 2.322570e-04	k: 500	n:2350000
Cons ci ratio: 4.297197e-03	ci left: 2.609433e-01	ci right 2.620675e-01	k: 614537	n:2350000
KS ci ratio: 1.751140e-01	ci left: 1.945245e-04	ci right 2.322570e-04	k: 500	n:2350000
SCN5A   2350000 perm   2674 sec   (879 perm/sec)   p_kst 2.127660e-04   p_cons 2.615051e-01   p_joint 2.127660e-04

Joint ci ratio: 1.749395e-01	ci left: 1.941054e-04	ci right 2.317151e-04	k: 501	n:2360000
Cons ci ratio: 4.287910e-03	ci left: 2.609602e-01	ci right 2.620819e-01	k: 617189	n:2360000
KS ci ratio: 1.749395e-01	ci left: 1.941054e-04	ci right 2.317151e-04	k: 501	n:2360000
SCN5A   2360000 perm   2695 sec   (876 perm/sec)   p_kst 2.122881e-04   p_cons 2.615208e-01   p_joint 2.122881e-04

Joint ci ratio: 1.745921e-01	ci left: 1.940934e-04	ci right 2.316182e-04	k: 503	n:2370000
Cons ci ratio: 4.278775e-03	ci left: 2.609684e-01	ci right 2.620879e-01	k: 619821	n:2370000
KS ci ratio: 1.745921e-01	ci left: 1.940934e-04	ci right 2.316182e-04	k: 503	n:2370000
SCN5A   2370000 perm   2715 sec   (873 perm/sec)   p_kst 2.122363e-04   p_cons 2.615278e-01   p_joint 2.122363e-04

Joint ci ratio: 1.740747e-01	ci left: 1.944834e-04	ci right 2.319605e-04	k: 506	n:2380000
Cons ci ratio: 4.269695e-03	ci left: 2.609770e-01	ci right 2.620941e-01	k: 622454	n:2380000
KS ci ratio: 1.740747e-01	ci left: 1.944834e-04	ci right 2.319605e-04	k: 506	n:2380000
SCN5A   2380000 perm   2736 sec   (870 perm/sec)   p_kst 2.126050e-04   p_cons 2.615353e-01   p_joint 2.126050e-04

Joint ci ratio: 1.740748e-01	ci left: 1.936696e-04	ci right 2.309899e-04	k: 506	n:2390000
Cons ci ratio: 4.260228e-03	ci left: 2.610257e-01	ci right 2.621405e-01	k: 625183	n:2390000
KS ci ratio: 1.740748e-01	ci left: 1.936696e-04	ci right 2.309899e-04	k: 506	n:2390000
SCN5A   2390000 perm   2756 sec   (867 perm/sec)   p_kst 2.117155e-04   p_cons 2.615828e-01   p_joint 2.117155e-04

Joint ci ratio: 1.735620e-01	ci left: 1.940583e-04	ci right 2.313318e-04	k: 509	n:2400000
Cons ci ratio: 4.251288e-03	ci left: 2.610320e-01	ci right 2.621444e-01	k: 627811	n:2400000
KS ci ratio: 1.735620e-01	ci left: 1.940583e-04	ci right 2.313318e-04	k: 509	n:2400000
SCN5A   2400000 perm   2777 sec   (864 perm/sec)   p_kst 2.120833e-04   p_cons 2.615879e-01   p_joint 2.120833e-04

Joint ci ratio: 1.733922e-01	ci left: 1.936500e-04	ci right 2.308048e-04	k: 510	n:2410000
Cons ci ratio: 4.242531e-03	ci left: 2.610265e-01	ci right 2.621367e-01	k: 630411	n:2410000
KS ci ratio: 1.733922e-01	ci left: 1.936500e-04	ci right 2.308048e-04	k: 510	n:2410000
SCN5A   2410000 perm   2798 sec   (861 perm/sec)   p_kst 2.116183e-04   p_cons 2.615813e-01   p_joint 2.116183e-04

Joint ci ratio: 1.730538e-01	ci left: 1.936404e-04	ci right 2.307133e-04	k: 512	n:2420000
Cons ci ratio: 4.233928e-03	ci left: 2.610121e-01	ci right 2.621199e-01	k: 632989	n:2420000
KS ci ratio: 1.730538e-01	ci left: 1.936404e-04	ci right 2.307133e-04	k: 512	n:2420000
SCN5A   2420000 perm   2819 sec   (859 perm/sec)   p_kst 2.115702e-04   p_cons 2.615657e-01   p_joint 2.115702e-04

Joint ci ratio: 1.725500e-01	ci left: 1.940247e-04	ci right 2.310518e-04	k: 515	n:2430000
Cons ci ratio: 4.225250e-03	ci left: 2.610092e-01	ci right 2.621148e-01	k: 635595	n:2430000
KS ci ratio: 1.725500e-01	ci left: 1.940247e-04	ci right 2.310518e-04	k: 515	n:2430000
SCN5A   2430000 perm   2840 sec   (856 perm/sec)   p_kst 2.119342e-04   p_cons 2.615617e-01   p_joint 2.119342e-04

Joint ci ratio: 1.717199e-01	ci left: 1.951904e-04	ci right 2.322422e-04	k: 520	n:2440000
Cons ci ratio: 4.216434e-03	ci left: 2.610240e-01	ci right 2.621273e-01	k: 638244	n:2440000
KS ci ratio: 1.717199e-01	ci left: 1.951904e-04	ci right 2.322422e-04	k: 520	n:2440000
SCN5A   2440000 perm   2861 sec   (853 perm/sec)   p_kst 2.131148e-04   p_cons 2.615754e-01   p_joint 2.131148e-04

Joint ci ratio: 1.715554e-01	ci left: 1.947844e-04	ci right 2.317200e-04	k: 521	n:2450000
Cons ci ratio: 4.207961e-03	ci left: 2.610122e-01	ci right 2.621132e-01	k: 640828	n:2450000
KS ci ratio: 1.715554e-01	ci left: 1.947844e-04	ci right 2.317200e-04	k: 521	n:2450000
SCN5A   2450000 perm   2882 sec   (850 perm/sec)   p_kst 2.126531e-04   p_cons 2.615624e-01   p_joint 2.126531e-04

Joint ci ratio: 1.713914e-01	ci left: 1.943816e-04	ci right 2.312020e-04	k: 522	n:2460000
Cons ci ratio: 4.199367e-03	ci left: 2.610163e-01	ci right 2.621151e-01	k: 643451	n:2460000
KS ci ratio: 1.713914e-01	ci left: 1.943816e-04	ci right 2.312020e-04	k: 522	n:2460000
SCN5A   2460000 perm   2904 sec   (847 perm/sec)   p_kst 2.121951e-04   p_cons 2.615654e-01   p_joint 2.121951e-04

Joint ci ratio: 1.709019e-01	ci left: 1.947572e-04	ci right 2.315325e-04	k: 525	n:2470000
Cons ci ratio: 4.190720e-03	ci left: 2.610301e-01	ci right 2.621267e-01	k: 646098	n:2470000
KS ci ratio: 1.709019e-01	ci left: 1.947572e-04	ci right 2.315325e-04	k: 525	n:2470000
SCN5A   2470000 perm   2925 sec   (844 perm/sec)   p_kst 2.125506e-04   p_cons 2.615781e-01   p_joint 2.125506e-04

Joint ci ratio: 1.707397e-01	ci left: 1.943579e-04	ci right 2.310194e-04	k: 526	n:2480000
Cons ci ratio: 4.182183e-03	ci left: 2.610386e-01	ci right 2.621330e-01	k: 648732	n:2480000
KS ci ratio: 1.707397e-01	ci left: 1.943579e-04	ci right 2.310194e-04	k: 526	n:2480000
SCN5A   2480000 perm   2947 sec   (842 perm/sec)   p_kst 2.120968e-04   p_cons 2.615855e-01   p_joint 2.120968e-04

Joint ci ratio: 1.707398e-01	ci left: 1.935773e-04	ci right 2.300916e-04	k: 526	n:2490000
Cons ci ratio: 4.173754e-03	ci left: 2.610417e-01	ci right 2.621339e-01	k: 651353	n:2490000
KS ci ratio: 1.707398e-01	ci left: 1.935773e-04	ci right 2.300916e-04	k: 526	n:2490000
SCN5A   2490000 perm   2969 sec   (839 perm/sec)   p_kst 2.112450e-04   p_cons 2.615876e-01   p_joint 2.112450e-04

Joint ci ratio: 1.704167e-01	ci left: 1.935689e-04	ci right 2.300053e-04	k: 528	n:2500000
Cons ci ratio: 4.165333e-03	ci left: 2.610489e-01	ci right 2.621389e-01	k: 653984	n:2500000
KS ci ratio: 1.704167e-01	ci left: 1.935689e-04	ci right 2.300053e-04	k: 528	n:2500000
SCN5A   2500000 perm   2990 sec   (836 perm/sec)   p_kst 2.112000e-04   p_cons 2.615936e-01   p_joint 2.112000e-04

Joint ci ratio: 1.699355e-01	ci left: 1.939420e-04	ci right 2.303350e-04	k: 531	n:2510000
Cons ci ratio: 4.157263e-03	ci left: 2.610281e-01	ci right 2.621159e-01	k: 656545	n:2510000
KS ci ratio: 1.699355e-01	ci left: 1.939420e-04	ci right 2.303350e-04	k: 531	n:2510000
SCN5A   2510000 perm   3012 sec   (833 perm/sec)   p_kst 2.115538e-04   p_cons 2.615717e-01   p_joint 2.115538e-04

Joint ci ratio: 1.697761e-01	ci left: 1.935523e-04	ci right 2.298347e-04	k: 532	n:2520000
Cons ci ratio: 4.149619e-03	ci left: 2.609722e-01	ci right 2.620577e-01	k: 659017	n:2520000
KS ci ratio: 1.697761e-01	ci left: 1.935523e-04	ci right 2.298347e-04	k: 532	n:2520000
SCN5A   2520000 perm   3034 sec   (831 perm/sec)   p_kst 2.111111e-04   p_cons 2.615147e-01   p_joint 2.111111e-04

Joint ci ratio: 1.693002e-01	ci left: 1.939228e-04	ci right 2.301623e-04	k: 535	n:2530000
Cons ci ratio: 4.141462e-03	ci left: 2.609684e-01	ci right 2.620519e-01	k: 661620	n:2530000
KS ci ratio: 1.693002e-01	ci left: 1.939228e-04	ci right 2.301623e-04	k: 535	n:2530000
SCN5A   2530000 perm   3056 sec   (828 perm/sec)   p_kst 2.114625e-04   p_cons 2.615099e-01   p_joint 2.114625e-04

Joint ci ratio: 1.693003e-01	ci left: 1.931593e-04	ci right 2.292562e-04	k: 535	n:2540000
Cons ci ratio: 4.133436e-03	ci left: 2.609569e-01	ci right 2.620381e-01	k: 664203	n:2540000
KS ci ratio: 1.693003e-01	ci left: 1.931593e-04	ci right 2.292562e-04	k: 535	n:2540000
SCN5A   2540000 perm   3077 sec   (825 perm/sec)   p_kst 2.106299e-04   p_cons 2.614972e-01   p_joint 2.106299e-04

Joint ci ratio: 1.688285e-01	ci left: 1.935285e-04	ci right 2.295833e-04	k: 538	n:2550000
Cons ci ratio: 4.125311e-03	ci left: 2.609591e-01	ci right 2.620383e-01	k: 666821	n:2550000
KS ci ratio: 1.688285e-01	ci left: 1.935285e-04	ci right 2.295833e-04	k: 538	n:2550000
SCN5A   2550000 perm   3099 sec   (823 perm/sec)   p_kst 2.109804e-04   p_cons 2.614984e-01   p_joint 2.109804e-04

Joint ci ratio: 1.682054e-01	ci left: 1.942691e-04	ci right 2.303148e-04	k: 542	n:2560000
Cons ci ratio: 4.117271e-03	ci left: 2.609579e-01	ci right 2.620349e-01	k: 669430	n:2560000
KS ci ratio: 1.682054e-01	ci left: 1.942691e-04	ci right 2.303148e-04	k: 542	n:2560000
SCN5A   2560000 perm   3122 sec   (820 perm/sec)   p_kst 2.117187e-04   p_cons 2.614961e-01   p_joint 2.117187e-04

Joint ci ratio: 1.678965e-01	ci left: 1.942587e-04	ci right 2.302296e-04	k: 544	n:2570000
Cons ci ratio: 4.109228e-03	ci left: 2.609612e-01	ci right 2.620362e-01	k: 672051	n:2570000
KS ci ratio: 1.678965e-01	ci left: 1.942587e-04	ci right 2.302296e-04	k: 544	n:2570000
SCN5A   2570000 perm   3144 sec   (817 perm/sec)   p_kst 2.116732e-04   p_cons 2.614984e-01   p_joint 2.116732e-04

Joint ci ratio: 1.677427e-01	ci left: 1.938771e-04	ci right 2.297411e-04	k: 545	n:2580000
Cons ci ratio: 4.101211e-03	ci left: 2.609666e-01	ci right 2.620394e-01	k: 674677	n:2580000
KS ci ratio: 1.677427e-01	ci left: 1.938771e-04	ci right 2.297411e-04	k: 545	n:2580000
SCN5A   2580000 perm   3166 sec   (815 perm/sec)   p_kst 2.112403e-04   p_cons 2.615027e-01   p_joint 2.112403e-04

Joint ci ratio: 1.675894e-01	ci left: 1.934984e-04	ci right 2.292563e-04	k: 546	n:2590000
Cons ci ratio: 4.093327e-03	ci left: 2.609637e-01	ci right 2.620345e-01	k: 677282	n:2590000
KS ci ratio: 1.675894e-01	ci left: 1.934984e-04	ci right 2.292563e-04	k: 546	n:2590000
SCN5A   2590000 perm   3188 sec   (812 perm/sec)   p_kst 2.108108e-04   p_cons 2.614988e-01   p_joint 2.108108e-04

Joint ci ratio: 1.674364e-01	ci left: 1.931227e-04	ci right 2.287753e-04	k: 547	n:2600000
Cons ci ratio: 4.085374e-03	ci left: 2.609717e-01	ci right 2.620404e-01	k: 679915	n:2600000
KS ci ratio: 1.674364e-01	ci left: 1.931227e-04	ci right 2.287753e-04	k: 547	n:2600000
SCN5A   2600000 perm   3210 sec   (810 perm/sec)   p_kst 2.103846e-04   p_cons 2.615058e-01   p_joint 2.103846e-04

Joint ci ratio: 1.669800e-01	ci left: 1.934841e-04	ci right 2.290962e-04	k: 550	n:2610000
Cons ci ratio: 4.077496e-03	ci left: 2.609769e-01	ci right 2.620436e-01	k: 682541	n:2610000
KS ci ratio: 1.669800e-01	ci left: 1.934841e-04	ci right 2.290962e-04	k: 550	n:2610000
SCN5A   2610000 perm   3233 sec   (807 perm/sec)   p_kst 2.107280e-04   p_cons 2.615100e-01   p_joint 2.107280e-04

Joint ci ratio: 1.669800e-01	ci left: 1.927456e-04	ci right 2.282218e-04	k: 550	n:2620000
Cons ci ratio: 4.069559e-03	ci left: 2.609920e-01	ci right 2.620566e-01	k: 685193	n:2620000
KS ci ratio: 1.669800e-01	ci left: 1.927456e-04	ci right 2.282218e-04	k: 550	n:2620000
SCN5A   2620000 perm   3255 sec   (805 perm/sec)   p_kst 2.099237e-04   p_cons 2.615240e-01   p_joint 2.099237e-04

Joint ci ratio: 1.666778e-01	ci left: 1.927414e-04	ci right 2.281463e-04	k: 552	n:2630000
Cons ci ratio: 4.061716e-03	ci left: 2.610024e-01	ci right 2.620650e-01	k: 687833	n:2630000
KS ci ratio: 1.666778e-01	ci left: 1.927414e-04	ci right 2.281463e-04	k: 552	n:2630000
SCN5A   2630000 perm   3277 sec   (803 perm/sec)   p_kst 2.098859e-04   p_cons 2.615335e-01   p_joint 2.098859e-04

Joint ci ratio: 1.663772e-01	ci left: 1.927373e-04	ci right 2.280712e-04	k: 554	n:2640000
Cons ci ratio: 4.053878e-03	ci left: 2.610165e-01	ci right 2.620772e-01	k: 690483	n:2640000
KS ci ratio: 1.663772e-01	ci left: 1.927373e-04	ci right 2.280712e-04	k: 554	n:2640000
SCN5A   2640000 perm   3300 sec   (800 perm/sec)   p_kst 2.098485e-04   p_cons 2.615466e-01   p_joint 2.098485e-04

Joint ci ratio: 1.662276e-01	ci left: 1.923717e-04	ci right 2.276036e-04	k: 555	n:2650000
Cons ci ratio: 4.046437e-03	ci left: 2.609970e-01	ci right 2.620556e-01	k: 693044	n:2650000
KS ci ratio: 1.662276e-01	ci left: 1.923717e-04	ci right 2.276036e-04	k: 555	n:2650000
SCN5A   2650000 perm   3322 sec   (798 perm/sec)   p_kst 2.094340e-04   p_cons 2.615260e-01   p_joint 2.094340e-04

Joint ci ratio: 1.656328e-01	ci left: 1.930898e-04	ci right 2.283141e-04	k: 559	n:2660000
Cons ci ratio: 4.038589e-03	ci left: 2.610204e-01	ci right 2.620771e-01	k: 695719	n:2660000
KS ci ratio: 1.656328e-01	ci left: 1.930898e-04	ci right 2.283141e-04	k: 559	n:2660000
SCN5A   2660000 perm   3345 sec   (795 perm/sec)   p_kst 2.101504e-04   p_cons 2.615485e-01   p_joint 2.101504e-04

Joint ci ratio: 1.654851e-01	ci left: 1.927256e-04	ci right 2.278490e-04	k: 560	n:2670000
Cons ci ratio: 4.030998e-03	ci left: 2.610235e-01	ci right 2.620782e-01	k: 698340	n:2670000
KS ci ratio: 1.654851e-01	ci left: 1.927256e-04	ci right 2.278490e-04	k: 560	n:2670000
SCN5A   2670000 perm   3368 sec   (793 perm/sec)   p_kst 2.097378e-04   p_cons 2.615506e-01   p_joint 2.097378e-04

Joint ci ratio: 1.653379e-01	ci left: 1.923642e-04	ci right 2.273874e-04	k: 561	n:2680000
Cons ci ratio: 4.023309e-03	ci left: 2.610399e-01	ci right 2.620927e-01	k: 700997	n:2680000
KS ci ratio: 1.653379e-01	ci left: 1.923642e-04	ci right 2.273874e-04	k: 561	n:2680000
SCN5A   2680000 perm   3390 sec   (791 perm/sec)   p_kst 2.093284e-04   p_cons 2.615660e-01   p_joint 2.093284e-04

Joint ci ratio: 1.653379e-01	ci left: 1.916490e-04	ci right 2.265421e-04	k: 561	n:2690000
Cons ci ratio: 4.015903e-03	ci left: 2.610332e-01	ci right 2.620840e-01	k: 703592	n:2690000
KS ci ratio: 1.653379e-01	ci left: 1.916490e-04	ci right 2.265421e-04	k: 561	n:2690000
SCN5A   2690000 perm   3413 sec   (788 perm/sec)   p_kst 2.085502e-04   p_cons 2.615584e-01   p_joint 2.085502e-04

Joint ci ratio: 1.648984e-01	ci left: 1.920044e-04	ci right 2.268600e-04	k: 564	n:2700000
Cons ci ratio: 4.008512e-03	ci left: 2.610292e-01	ci right 2.620780e-01	k: 706194	n:2700000
KS ci ratio: 1.648984e-01	ci left: 1.920044e-04	ci right 2.268600e-04	k: 564	n:2700000
SCN5A   2700000 perm   3436 sec   (786 perm/sec)   p_kst 2.088889e-04   p_cons 2.615533e-01   p_joint 2.088889e-04

Joint ci ratio: 1.644623e-01	ci left: 1.923573e-04	ci right 2.271755e-04	k: 567	n:2710000
Cons ci ratio: 4.000855e-03	ci left: 2.610547e-01	ci right 2.621016e-01	k: 708876	n:2710000
KS ci ratio: 1.644623e-01	ci left: 1.923573e-04	ci right 2.271755e-04	k: 567	n:2710000
SCN5A   2710000 perm   3459 sec   (783 perm/sec)   p_kst 2.092251e-04   p_cons 2.615779e-01   p_joint 2.092251e-04

Joint ci ratio: 1.643177e-01	ci left: 1.920027e-04	ci right 2.267231e-04	k: 568	n:2720000
Cons ci ratio: 3.993448e-03	ci left: 2.610601e-01	ci right 2.621051e-01	k: 711504	n:2720000
KS ci ratio: 1.643177e-01	ci left: 1.920027e-04	ci right 2.267231e-04	k: 568	n:2720000
SCN5A   2720000 perm   3482 sec   (781 perm/sec)   p_kst 2.088235e-04   p_cons 2.615824e-01   p_joint 2.088235e-04

Joint ci ratio: 1.643178e-01	ci left: 1.912993e-04	ci right 2.258926e-04	k: 568	n:2730000
Cons ci ratio: 3.985926e-03	ci left: 2.610805e-01	ci right 2.621236e-01	k: 714173	n:2730000
KS ci ratio: 1.643178e-01	ci left: 1.912993e-04	ci right 2.258926e-04	k: 568	n:2730000
SCN5A   2730000 perm   3506 sec   (779 perm/sec)   p_kst 2.080586e-04   p_cons 2.616018e-01   p_joint 2.080586e-04

Joint ci ratio: 1.638863e-01	ci left: 1.916511e-04	ci right 2.262080e-04	k: 571	n:2740000
Cons ci ratio: 3.978447e-03	ci left: 2.611008e-01	ci right 2.621420e-01	k: 716842	n:2740000
KS ci ratio: 1.638863e-01	ci left: 1.916511e-04	ci right 2.262080e-04	k: 571	n:2740000
SCN5A   2740000 perm   3528 sec   (777 perm/sec)   p_kst 2.083942e-04   p_cons 2.616212e-01   p_joint 2.083942e-04

Joint ci ratio: 1.636005e-01	ci left: 1.916517e-04	ci right 2.261424e-04	k: 573	n:2750000
Cons ci ratio: 3.971241e-03	ci left: 2.610984e-01	ci right 2.621377e-01	k: 719449	n:2750000
KS ci ratio: 1.636005e-01	ci left: 1.916517e-04	ci right 2.261424e-04	k: 573	n:2750000
SCN5A   2750000 perm   3552 sec   (774 perm/sec)   p_kst 2.083636e-04   p_cons 2.616178e-01   p_joint 2.083636e-04

Joint ci ratio: 1.633163e-01	ci left: 1.916523e-04	ci right 2.260773e-04	k: 575	n:2760000
Cons ci ratio: 3.964216e-03	ci left: 2.610823e-01	ci right 2.621197e-01	k: 722018	n:2760000
KS ci ratio: 1.633163e-01	ci left: 1.916523e-04	ci right 2.260773e-04	k: 575	n:2760000
SCN5A   2760000 perm   3575 sec   (772 perm/sec)   p_kst 2.083333e-04   p_cons 2.616007e-01   p_joint 2.083333e-04

Joint ci ratio: 1.630335e-01	ci left: 1.916529e-04	ci right 2.260127e-04	k: 577	n:2770000
Cons ci ratio: 3.957157e-03	ci left: 2.610731e-01	ci right 2.621086e-01	k: 724606	n:2770000
KS ci ratio: 1.630335e-01	ci left: 1.916529e-04	ci right 2.260127e-04	k: 577	n:2770000
SCN5A   2770000 perm   3599 sec   (770 perm/sec)   p_kst 2.083032e-04   p_cons 2.615906e-01   p_joint 2.083032e-04

Joint ci ratio: 1.628926e-01	ci left: 1.913086e-04	ci right 2.255740e-04	k: 578	n:2780000
Cons ci ratio: 3.950195e-03	ci left: 2.610583e-01	ci right 2.620919e-01	k: 727178	n:2780000
KS ci ratio: 1.628926e-01	ci left: 1.913086e-04	ci right 2.255740e-04	k: 578	n:2780000
SCN5A   2780000 perm   3623 sec   (767 perm/sec)   p_kst 2.079137e-04   p_cons 2.615748e-01   p_joint 2.079137e-04

Joint ci ratio: 1.624722e-01	ci left: 1.916544e-04	ci right 2.258845e-04	k: 581	n:2790000
Cons ci ratio: 3.943076e-03	ci left: 2.610625e-01	ci right 2.620943e-01	k: 729803	n:2790000
KS ci ratio: 1.624722e-01	ci left: 1.916544e-04	ci right 2.258845e-04	k: 581	n:2790000
SCN5A   2790000 perm   3646 sec   (765 perm/sec)   p_kst 2.082437e-04   p_cons 2.615781e-01   p_joint 2.082437e-04

Joint ci ratio: 1.620551e-01	ci left: 1.919978e-04	ci right 2.261927e-04	k: 584	n:2800000
Cons ci ratio: 3.936122e-03	ci left: 2.610542e-01	ci right 2.620841e-01	k: 732393	n:2800000
KS ci ratio: 1.620551e-01	ci left: 1.919978e-04	ci right 2.261927e-04	k: 584	n:2800000
SCN5A   2800000 perm   3670 sec   (763 perm/sec)   p_kst 2.085714e-04   p_cons 2.615689e-01   p_joint 2.085714e-04

Joint ci ratio: 1.616411e-01	ci left: 1.923389e-04	ci right 2.264986e-04	k: 587	n:2810000
Cons ci ratio: 3.928970e-03	ci left: 2.610691e-01	ci right 2.620972e-01	k: 735048	n:2810000
KS ci ratio: 1.616411e-01	ci left: 1.923389e-04	ci right 2.264986e-04	k: 587	n:2810000
SCN5A   2810000 perm   3694 sec   (761 perm/sec)   p_kst 2.088968e-04   p_cons 2.615829e-01   p_joint 2.088968e-04

Joint ci ratio: 1.615039e-01	ci left: 1.919971e-04	ci right 2.260643e-04	k: 588	n:2820000
Cons ci ratio: 3.922079e-03	ci left: 2.610619e-01	ci right 2.620882e-01	k: 737641	n:2820000
KS ci ratio: 1.615039e-01	ci left: 1.919971e-04	ci right 2.260643e-04	k: 588	n:2820000
SCN5A   2820000 perm   3717 sec   (759 perm/sec)   p_kst 2.085106e-04   p_cons 2.615748e-01   p_joint 2.085106e-04

Joint ci ratio: 1.613670e-01	ci left: 1.916578e-04	ci right 2.256331e-04	k: 589	n:2830000
Cons ci ratio: 3.915351e-03	ci left: 2.610425e-01	ci right 2.620669e-01	k: 740199	n:2830000
KS ci ratio: 1.613670e-01	ci left: 1.916578e-04	ci right 2.256331e-04	k: 589	n:2830000
SCN5A   2830000 perm   3742 sec   (756 perm/sec)   p_kst 2.081272e-04   p_cons 2.615544e-01   p_joint 2.081272e-04

Joint ci ratio: 1.613671e-01	ci left: 1.909829e-04	ci right 2.248386e-04	k: 589	n:2840000
Cons ci ratio: 3.908257e-03	ci left: 2.610625e-01	ci right 2.620852e-01	k: 742869	n:2840000
KS ci ratio: 1.613671e-01	ci left: 1.909829e-04	ci right 2.248386e-04	k: 589	n:2840000
SCN5A   2840000 perm   3766 sec   (754 perm/sec)   p_kst 2.073944e-04   p_cons 2.615736e-01   p_joint 2.073944e-04

Joint ci ratio: 1.609583e-01	ci left: 1.913230e-04	ci right 2.251448e-04	k: 592	n:2850000
Cons ci ratio: 3.901238e-03	ci left: 2.610789e-01	ci right 2.620998e-01	k: 745529	n:2850000
KS ci ratio: 1.609583e-01	ci left: 1.913230e-04	ci right 2.251448e-04	k: 592	n:2850000
SCN5A   2850000 perm   3790 sec   (752 perm/sec)   p_kst 2.077193e-04   p_cons 2.615891e-01   p_joint 2.077193e-04

Joint ci ratio: 1.606876e-01	ci left: 1.913252e-04	ci right 2.250850e-04	k: 594	n:2860000
Cons ci ratio: 3.894274e-03	ci left: 2.610935e-01	ci right 2.621126e-01	k: 748184	n:2860000
KS ci ratio: 1.606876e-01	ci left: 1.913252e-04	ci right 2.250850e-04	k: 594	n:2860000
SCN5A   2860000 perm   3814 sec   (750 perm/sec)   p_kst 2.076923e-04   p_cons 2.616028e-01   p_joint 2.076923e-04

Joint ci ratio: 1.606876e-01	ci left: 1.906585e-04	ci right 2.243007e-04	k: 594	n:2870000
Cons ci ratio: 3.887582e-03	ci left: 2.610846e-01	ci right 2.621019e-01	k: 750772	n:2870000
KS ci ratio: 1.606876e-01	ci left: 1.906585e-04	ci right 2.243007e-04	k: 594	n:2870000
SCN5A   2870000 perm   3839 sec   (748 perm/sec)   p_kst 2.069686e-04   p_cons 2.615930e-01   p_joint 2.069686e-04

Joint ci ratio: 1.604183e-01	ci left: 1.906631e-04	ci right 2.242442e-04	k: 596	n:2880000
Cons ci ratio: 3.880955e-03	ci left: 2.610727e-01	ci right 2.620882e-01	k: 753351	n:2880000
KS ci ratio: 1.604183e-01	ci left: 1.906631e-04	ci right 2.242442e-04	k: 596	n:2880000
SCN5A   2880000 perm   3863 sec   (746 perm/sec)   p_kst 2.069444e-04   p_cons 2.615802e-01   p_joint 2.069444e-04

Joint ci ratio: 1.601502e-01	ci left: 1.906676e-04	ci right 2.241881e-04	k: 598	n:2890000
Cons ci ratio: 3.874463e-03	ci left: 2.610508e-01	ci right 2.620645e-01	k: 755901	n:2890000
KS ci ratio: 1.601502e-01	ci left: 1.906676e-04	ci right 2.241881e-04	k: 598	n:2890000
SCN5A   2890000 perm   3888 sec   (743 perm/sec)   p_kst 2.069204e-04   p_cons 2.615574e-01   p_joint 2.069204e-04

Joint ci ratio: 1.597507e-01	ci left: 1.910032e-04	ci right 2.244909e-04	k: 601	n:2900000
Cons ci ratio: 3.867918e-03	ci left: 2.610377e-01	ci right 2.620497e-01	k: 758476	n:2900000
KS ci ratio: 1.597507e-01	ci left: 1.910032e-04	ci right 2.244909e-04	k: 601	n:2900000
SCN5A   2900000 perm   3912 sec   (741 perm/sec)   p_kst 2.072414e-04   p_cons 2.615434e-01   p_joint 2.072414e-04

Joint ci ratio: 1.594860e-01	ci left: 1.910067e-04	ci right 2.244341e-04	k: 603	n:2910000
Cons ci ratio: 3.861312e-03	ci left: 2.610340e-01	ci right 2.620442e-01	k: 761078	n:2910000
KS ci ratio: 1.594860e-01	ci left: 1.910067e-04	ci right 2.244341e-04	k: 603	n:2910000
SCN5A   2910000 perm   3936 sec   (739 perm/sec)   p_kst 2.072165e-04   p_cons 2.615388e-01   p_joint 2.072165e-04

Joint ci ratio: 1.590913e-01	ci left: 1.913390e-04	ci right 2.247338e-04	k: 606	n:2920000
Cons ci ratio: 3.854901e-03	ci left: 2.610142e-01	ci right 2.620226e-01	k: 763633	n:2920000
KS ci ratio: 1.590913e-01	ci left: 1.913390e-04	ci right 2.247338e-04	k: 606	n:2920000
SCN5A   2920000 perm   3961 sec   (737 perm/sec)   p_kst 2.075342e-04   p_cons 2.615182e-01   p_joint 2.075342e-04

Joint ci ratio: 1.586996e-01	ci left: 1.916692e-04	ci right 2.250314e-04	k: 609	n:2930000
Cons ci ratio: 3.848345e-03	ci left: 2.610122e-01	ci right 2.620190e-01	k: 766240	n:2930000
KS ci ratio: 1.586996e-01	ci left: 1.916692e-04	ci right 2.250314e-04	k: 609	n:2930000
SCN5A   2930000 perm   3985 sec   (735 perm/sec)   p_kst 2.078498e-04   p_cons 2.615154e-01   p_joint 2.078498e-04

Joint ci ratio: 1.584401e-01	ci left: 1.916705e-04	ci right 2.249732e-04	k: 611	n:2940000
Cons ci ratio: 3.841782e-03	ci left: 2.610144e-01	ci right 2.620194e-01	k: 768859	n:2940000
KS ci ratio: 1.584401e-01	ci left: 1.916705e-04	ci right 2.249732e-04	k: 611	n:2940000
SCN5A   2940000 perm   4009 sec   (733 perm/sec)   p_kst 2.078231e-04   p_cons 2.615167e-01   p_joint 2.078231e-04

Joint ci ratio: 1.579248e-01	ci left: 1.923230e-04	ci right 2.256201e-04	k: 615	n:2950000
Cons ci ratio: 3.835157e-03	ci left: 2.610260e-01	ci right 2.620294e-01	k: 771506	n:2950000
KS ci ratio: 1.579248e-01	ci left: 1.923230e-04	ci right 2.256201e-04	k: 615	n:2950000
SCN5A   2950000 perm   4034 sec   (731 perm/sec)   p_kst 2.084746e-04   p_cons 2.615275e-01   p_joint 2.084746e-04

Joint ci ratio: 1.576690e-01	ci left: 1.923223e-04	ci right 2.255603e-04	k: 617	n:2960000
Cons ci ratio: 3.828752e-03	ci left: 2.610190e-01	ci right 2.620206e-01	k: 774098	n:2960000
KS ci ratio: 1.576690e-01	ci left: 1.923223e-04	ci right 2.255603e-04	k: 617	n:2960000
SCN5A   2960000 perm   4059 sec   (729 perm/sec)   p_kst 2.084459e-04   p_cons 2.615196e-01   p_joint 2.084459e-04

Joint ci ratio: 1.575417e-01	ci left: 1.919982e-04	ci right 2.251508e-04	k: 618	n:2970000
Cons ci ratio: 3.822288e-03	ci left: 2.610211e-01	ci right 2.620211e-01	k: 776717	n:2970000
KS ci ratio: 1.575417e-01	ci left: 1.919982e-04	ci right 2.251508e-04	k: 618	n:2970000
SCN5A   2970000 perm   4083 sec   (727 perm/sec)   p_kst 2.080808e-04   p_cons 2.615209e-01   p_joint 2.080808e-04

Joint ci ratio: 1.575417e-01	ci left: 1.913539e-04	ci right 2.243952e-04	k: 618	n:2980000
Cons ci ratio: 3.815870e-03	ci left: 2.610219e-01	ci right 2.620202e-01	k: 779332	n:2980000
KS ci ratio: 1.575417e-01	ci left: 1.913539e-04	ci right 2.243952e-04	k: 618	n:2980000
SCN5A   2980000 perm   4108 sec   (725 perm/sec)   p_kst 2.073826e-04   p_cons 2.615208e-01   p_joint 2.073826e-04

Joint ci ratio: 1.575418e-01	ci left: 1.907139e-04	ci right 2.236447e-04	k: 618	n:2990000
Cons ci ratio: 3.809359e-03	ci left: 2.610354e-01	ci right 2.620320e-01	k: 781985	n:2990000
KS ci ratio: 1.575418e-01	ci left: 1.907139e-04	ci right 2.236447e-04	k: 618	n:2990000
SCN5A   2990000 perm   4133 sec   (723 perm/sec)   p_kst 2.066890e-04   p_cons 2.615334e-01   p_joint 2.066890e-04

Joint ci ratio: 1.570351e-01	ci left: 1.913590e-04	ci right 2.242850e-04	k: 622	n:3000000
Cons ci ratio: 3.803331e-03	ci left: 2.610031e-01	ci right 2.619980e-01	k: 784501	n:3000000
KS ci ratio: 1.570351e-01	ci left: 1.913590e-04	ci right 2.242850e-04	k: 622	n:3000000
SCN5A   3000000 perm   4158 sec   (722 perm/sec)   p_kst 2.073333e-04   p_cons 2.615003e-01   p_joint 2.073333e-04

Joint ci ratio: 1.570352e-01	ci left: 1.907233e-04	ci right 2.235399e-04	k: 622	n:3010000
Cons ci ratio: 3.797135e-03	ci left: 2.609910e-01	ci right 2.619842e-01	k: 787077	n:3010000
KS ci ratio: 1.570352e-01	ci left: 1.907233e-04	ci right 2.235399e-04	k: 622	n:3010000
SCN5A   3010000 perm   4182 sec   (720 perm/sec)   p_kst 2.066445e-04   p_cons 2.614874e-01   p_joint 2.066445e-04

Joint ci ratio: 1.565334e-01	ci left: 1.913643e-04	ci right 2.241761e-04	k: 626	n:3020000
Cons ci ratio: 3.790618e-03	ci left: 2.610147e-01	ci right 2.620063e-01	k: 789761	n:3020000
KS ci ratio: 1.565334e-01	ci left: 1.913643e-04	ci right 2.241761e-04	k: 626	n:3020000
SCN5A   3020000 perm   4208 sec   (718 perm/sec)   p_kst 2.072848e-04   p_cons 2.615103e-01   p_joint 2.072848e-04

Joint ci ratio: 1.562844e-01	ci left: 1.913670e-04	ci right 2.241221e-04	k: 628	n:3030000
Cons ci ratio: 3.784410e-03	ci left: 2.610102e-01	ci right 2.620002e-01	k: 792360	n:3030000
KS ci ratio: 1.562844e-01	ci left: 1.913670e-04	ci right 2.241221e-04	k: 628	n:3030000
SCN5A   3030000 perm   4234 sec   (716 perm/sec)   p_kst 2.072607e-04   p_cons 2.615050e-01   p_joint 2.072607e-04

Joint ci ratio: 1.556668e-01	ci left: 1.923180e-04	ci right 2.250938e-04	k: 633	n:3040000
Cons ci ratio: 3.778351e-03	ci left: 2.609936e-01	ci right 2.619819e-01	k: 794922	n:3040000
KS ci ratio: 1.556668e-01	ci left: 1.923180e-04	ci right 2.250938e-04	k: 633	n:3040000
SCN5A   3040000 perm   4260 sec   (714 perm/sec)   p_kst 2.082237e-04   p_cons 2.614875e-01   p_joint 2.082237e-04

Joint ci ratio: 1.554219e-01	ci left: 1.923177e-04	ci right 2.250370e-04	k: 635	n:3050000
Cons ci ratio: 3.772206e-03	ci left: 2.609889e-01	ci right 2.619755e-01	k: 797520	n:3050000
KS ci ratio: 1.554219e-01	ci left: 1.923177e-04	ci right 2.250370e-04	k: 635	n:3050000
SCN5A   3050000 perm   4286 sec   (712 perm/sec)   p_kst 2.081967e-04   p_cons 2.614820e-01   p_joint 2.081967e-04

Joint ci ratio: 1.548144e-01	ci left: 1.932598e-04	ci right 2.259989e-04	k: 640	n:3060000
Cons ci ratio: 3.766190e-03	ci left: 2.609740e-01	ci right 2.619591e-01	k: 800087	n:3060000
KS ci ratio: 1.548144e-01	ci left: 1.932598e-04	ci right 2.259989e-04	k: 640	n:3060000
SCN5A   3060000 perm   4312 sec   (710 perm/sec)   p_kst 2.091503e-04   p_cons 2.614663e-01   p_joint 2.091503e-04

Joint ci ratio: 1.548145e-01	ci left: 1.926302e-04	ci right 2.252628e-04	k: 640	n:3070000
Cons ci ratio: 3.759923e-03	ci left: 2.609880e-01	ci right 2.619714e-01	k: 802742	n:3070000
KS ci ratio: 1.548145e-01	ci left: 1.926302e-04	ci right 2.252628e-04	k: 640	n:3070000
SCN5A   3070000 perm   4336 sec   (708 perm/sec)   p_kst 2.084691e-04   p_cons 2.614795e-01   p_joint 2.084691e-04

Joint ci ratio: 1.545735e-01	ci left: 1.926290e-04	ci right 2.252059e-04	k: 642	n:3080000
Cons ci ratio: 3.753527e-03	ci left: 2.610184e-01	ci right 2.620003e-01	k: 805448	n:3080000
KS ci ratio: 1.545735e-01	ci left: 1.926290e-04	ci right 2.252059e-04	k: 642	n:3080000
SCN5A   3080000 perm   4363 sec   (706 perm/sec)   p_kst 2.084416e-04   p_cons 2.615091e-01   p_joint 2.084416e-04

Joint ci ratio: 1.545736e-01	ci left: 1.920056e-04	ci right 2.244771e-04	k: 642	n:3090000
Cons ci ratio: 3.747295e-03	ci left: 2.610350e-01	ci right 2.620153e-01	k: 808112	n:3090000
KS ci ratio: 1.545736e-01	ci left: 1.920056e-04	ci right 2.244771e-04	k: 642	n:3090000
SCN5A   3090000 perm   4389 sec   (704 perm/sec)   p_kst 2.077670e-04   p_cons 2.615249e-01   p_joint 2.077670e-04

Joint ci ratio: 1.545737e-01	ci left: 1.913863e-04	ci right 2.237530e-04	k: 642	n:3100000
Cons ci ratio: 3.741253e-03	ci left: 2.610350e-01	ci right 2.620138e-01	k: 810725	n:3100000
KS ci ratio: 1.545737e-01	ci left: 1.913863e-04	ci right 2.237530e-04	k: 642	n:3100000
SCN5A   3100000 perm   4415 sec   (702 perm/sec)   p_kst 2.070968e-04   p_cons 2.615242e-01   p_joint 2.070968e-04

Joint ci ratio: 1.543338e-01	ci left: 1.913891e-04	ci right 2.237014e-04	k: 644	n:3110000
Cons ci ratio: 3.735162e-03	ci left: 2.610431e-01	ci right 2.620203e-01	k: 813363	n:3110000
KS ci ratio: 1.543338e-01	ci left: 1.913891e-04	ci right 2.237014e-04	k: 644	n:3110000
SCN5A   3110000 perm   4441 sec   (700 perm/sec)   p_kst 2.070740e-04   p_cons 2.615315e-01   p_joint 2.070740e-04

Joint ci ratio: 1.543339e-01	ci left: 1.907757e-04	ci right 2.229844e-04	k: 644	n:3120000
Cons ci ratio: 3.729321e-03	ci left: 2.610285e-01	ci right 2.620040e-01	k: 815930	n:3120000
KS ci ratio: 1.543339e-01	ci left: 1.907757e-04	ci right 2.229844e-04	k: 644	n:3120000
SCN5A   3120000 perm   4467 sec   (698 perm/sec)   p_kst 2.064103e-04   p_cons 2.615160e-01   p_joint 2.064103e-04

Joint ci ratio: 1.539762e-01	ci left: 1.910877e-04	ci right 2.232674e-04	k: 647	n:3130000
Cons ci ratio: 3.723384e-03	ci left: 2.610266e-01	ci right 2.620006e-01	k: 818537	n:3130000
KS ci ratio: 1.539762e-01	ci left: 1.910877e-04	ci right 2.232674e-04	k: 647	n:3130000
SCN5A   3130000 perm   4494 sec   (696 perm/sec)   p_kst 2.067093e-04   p_cons 2.615134e-01   p_joint 2.067093e-04

Joint ci ratio: 1.535031e-01	ci left: 1.917040e-04	ci right 2.238792e-04	k: 651	n:3140000
Cons ci ratio: 3.717583e-03	ci left: 2.610137e-01	ci right 2.619861e-01	k: 821109	n:3140000
KS ci ratio: 1.535031e-01	ci left: 1.917040e-04	ci right 2.238792e-04	k: 651	n:3140000
SCN5A   3140000 perm   4520 sec   (695 perm/sec)   p_kst 2.073248e-04   p_cons 2.614997e-01   p_joint 2.073248e-04

Joint ci ratio: 1.535031e-01	ci left: 1.910954e-04	ci right 2.231685e-04	k: 651	n:3150000
Cons ci ratio: 3.711811e-03	ci left: 2.610005e-01	ci right 2.619714e-01	k: 823680	n:3150000
KS ci ratio: 1.535031e-01	ci left: 1.910954e-04	ci right 2.231685e-04	k: 651	n:3150000
SCN5A   3150000 perm   4546 sec   (693 perm/sec)   p_kst 2.066667e-04   p_cons 2.614857e-01   p_joint 2.066667e-04

Joint ci ratio: 1.532682e-01	ci left: 1.910993e-04	ci right 2.231195e-04	k: 653	n:3160000
Cons ci ratio: 3.705848e-03	ci left: 2.610102e-01	ci right 2.619795e-01	k: 826323	n:3160000
KS ci ratio: 1.532682e-01	ci left: 1.910993e-04	ci right 2.231195e-04	k: 653	n:3160000
SCN5A   3160000 perm   4573 sec   (691 perm/sec)   p_kst 2.066456e-04   p_cons 2.614946e-01   p_joint 2.066456e-04

Joint ci ratio: 1.529179e-01	ci left: 1.914066e-04	ci right 2.233982e-04	k: 656	n:3170000
Cons ci ratio: 3.699956e-03	ci left: 2.610154e-01	ci right 2.619832e-01	k: 828952	n:3170000
KS ci ratio: 1.529179e-01	ci left: 1.914066e-04	ci right 2.233982e-04	k: 656	n:3170000
SCN5A   3170000 perm   4599 sec   (689 perm/sec)   p_kst 2.069401e-04   p_cons 2.614991e-01   p_joint 2.069401e-04

Joint ci ratio: 1.526857e-01	ci left: 1.914095e-04	ci right 2.233487e-04	k: 658	n:3180000
Cons ci ratio: 3.694091e-03	ci left: 2.610205e-01	ci right 2.619868e-01	k: 831581	n:3180000
KS ci ratio: 1.526857e-01	ci left: 1.914095e-04	ci right 2.233487e-04	k: 658	n:3180000
SCN5A   3180000 perm   4626 sec   (687 perm/sec)   p_kst 2.069182e-04   p_cons 2.615035e-01   p_joint 2.069182e-04

Joint ci ratio: 1.521096e-01	ci left: 1.923171e-04	ci right 2.242756e-04	k: 663	n:3190000
Cons ci ratio: 3.688366e-03	ci left: 2.610141e-01	ci right 2.619788e-01	k: 834173	n:3190000
KS ci ratio: 1.521096e-01	ci left: 1.923171e-04	ci right 2.242756e-04	k: 663	n:3190000
SCN5A   3190000 perm   4653 sec   (686 perm/sec)   p_kst 2.078370e-04   p_cons 2.614962e-01   p_joint 2.078370e-04

Joint ci ratio: 1.518811e-01	ci left: 1.923174e-04	ci right 2.242235e-04	k: 665	n:3200000
Cons ci ratio: 3.682562e-03	ci left: 2.610186e-01	ci right 2.619819e-01	k: 836800	n:3200000
KS ci ratio: 1.518811e-01	ci left: 1.923174e-04	ci right 2.242235e-04	k: 665	n:3200000
SCN5A   3200000 perm   4680 sec   (684 perm/sec)   p_kst 2.078125e-04   p_cons 2.615000e-01   p_joint 2.078125e-04

Joint ci ratio: 1.515401e-01	ci left: 1.926174e-04	ci right 2.244950e-04	k: 668	n:3210000
Cons ci ratio: 3.676994e-03	ci left: 2.610013e-01	ci right 2.619630e-01	k: 839357	n:3210000
KS ci ratio: 1.515401e-01	ci left: 1.926174e-04	ci right 2.244950e-04	k: 668	n:3210000
SCN5A   3210000 perm   4707 sec   (682 perm/sec)   p_kst 2.080997e-04   p_cons 2.614819e-01   p_joint 2.080997e-04

Joint ci ratio: 1.513141e-01	ci left: 1.926168e-04	ci right 2.244425e-04	k: 670	n:3220000
Cons ci ratio: 3.671108e-03	ci left: 2.610201e-01	ci right 2.619804e-01	k: 842030	n:3220000
KS ci ratio: 1.513141e-01	ci left: 1.926168e-04	ci right 2.244425e-04	k: 670	n:3220000
SCN5A   3220000 perm   4733 sec   (680 perm/sec)   p_kst 2.080745e-04   p_cons 2.615000e-01   p_joint 2.080745e-04

Joint ci ratio: 1.512015e-01	ci left: 1.923183e-04	ci right 2.240689e-04	k: 671	n:3230000
Cons ci ratio: 3.665412e-03	ci left: 2.610217e-01	ci right 2.619805e-01	k: 844648	n:3230000
KS ci ratio: 1.512015e-01	ci left: 1.923183e-04	ci right 2.240689e-04	k: 671	n:3230000
SCN5A   3230000 perm   4760 sec   (679 perm/sec)   p_kst 2.077399e-04   p_cons 2.615009e-01   p_joint 2.077399e-04

Joint ci ratio: 1.509770e-01	ci left: 1.923187e-04	ci right 2.240179e-04	k: 673	n:3240000
Cons ci ratio: 3.659839e-03	ci left: 2.610132e-01	ci right 2.619705e-01	k: 847233	n:3240000
KS ci ratio: 1.509770e-01	ci left: 1.923187e-04	ci right 2.240179e-04	k: 673	n:3240000
SCN5A   3240000 perm   4786 sec   (677 perm/sec)   p_kst 2.077160e-04   p_cons 2.614917e-01   p_joint 2.077160e-04

Joint ci ratio: 1.504201e-01	ci left: 1.932074e-04	ci right 2.249251e-04	k: 678	n:3250000
Cons ci ratio: 3.654355e-03	ci left: 2.609980e-01	ci right 2.619538e-01	k: 849796	n:3250000
KS ci ratio: 1.504201e-01	ci left: 1.932074e-04	ci right 2.249251e-04	k: 678	n:3250000
SCN5A   3250000 perm   4813 sec   (675 perm/sec)   p_kst 2.086154e-04   p_cons 2.614757e-01   p_joint 2.086154e-04

Joint ci ratio: 1.500888e-01	ci left: 1.935004e-04	ci right 2.251899e-04	k: 681	n:3260000
Cons ci ratio: 3.648899e-03	ci left: 2.609826e-01	ci right 2.619369e-01	k: 852358	n:3260000
KS ci ratio: 1.500888e-01	ci left: 1.935004e-04	ci right 2.251899e-04	k: 681	n:3260000
SCN5A   3260000 perm   4841 sec   (673 perm/sec)   p_kst 2.088957e-04   p_cons 2.614595e-01   p_joint 2.088957e-04

Joint ci ratio: 1.498692e-01	ci left: 1.934973e-04	ci right 2.251358e-04	k: 683	n:3270000
Cons ci ratio: 3.643340e-03	ci left: 2.609807e-01	ci right 2.619335e-01	k: 854964	n:3270000
KS ci ratio: 1.498692e-01	ci left: 1.934973e-04	ci right 2.251358e-04	k: 683	n:3270000
SCN5A   3270000 perm   4869 sec   (672 perm/sec)   p_kst 2.088685e-04   p_cons 2.614569e-01   p_joint 2.088685e-04

Joint ci ratio: 1.496506e-01	ci left: 1.934943e-04	ci right 2.250820e-04	k: 685	n:3280000
Cons ci ratio: 3.637996e-03	ci left: 2.609587e-01	ci right 2.619100e-01	k: 857504	n:3280000
KS ci ratio: 1.496506e-01	ci left: 1.934943e-04	ci right 2.250820e-04	k: 685	n:3280000
SCN5A   3280000 perm   4896 sec   (670 perm/sec)   p_kst 2.088415e-04   p_cons 2.614341e-01   p_joint 2.088415e-04

Joint ci ratio: 1.495417e-01	ci left: 1.931987e-04	ci right 2.247132e-04	k: 686	n:3290000
Cons ci ratio: 3.632384e-03	ci left: 2.609678e-01	ci right 2.619177e-01	k: 860146	n:3290000
KS ci ratio: 1.495417e-01	ci left: 1.931987e-04	ci right 2.247132e-04	k: 686	n:3290000
SCN5A   3290000 perm   4924 sec   (668 perm/sec)   p_kst 2.085106e-04   p_cons 2.614426e-01   p_joint 2.085106e-04

Joint ci ratio: 1.493245e-01	ci left: 1.931967e-04	ci right 2.246610e-04	k: 688	n:3300000
Cons ci ratio: 3.626653e-03	ci left: 2.609923e-01	ci right 2.619408e-01	k: 862839	n:3300000
KS ci ratio: 1.493245e-01	ci left: 1.931967e-04	ci right 2.246610e-04	k: 688	n:3300000
SCN5A   3300000 perm   4951 sec   (667 perm/sec)   p_kst 2.084848e-04   p_cons 2.614664e-01   p_joint 2.084848e-04

Joint ci ratio: 1.487855e-01	ci left: 1.940672e-04	ci right 2.255491e-04	k: 693	n:3310000
Cons ci ratio: 3.621441e-03	ci left: 2.609641e-01	ci right 2.619112e-01	k: 865358	n:3310000
KS ci ratio: 1.487855e-01	ci left: 1.940672e-04	ci right 2.255491e-04	k: 693	n:3310000
SCN5A   3310000 perm   4978 sec   (665 perm/sec)   p_kst 2.093656e-04   p_cons 2.614375e-01   p_joint 2.093656e-04

Joint ci ratio: 1.485716e-01	ci left: 1.940627e-04	ci right 2.254945e-04	k: 695	n:3320000
Cons ci ratio: 3.616213e-03	ci left: 2.609404e-01	ci right 2.618860e-01	k: 867891	n:3320000
KS ci ratio: 1.485716e-01	ci left: 1.940627e-04	ci right 2.254945e-04	k: 695	n:3320000
SCN5A   3320000 perm   5006 sec   (663 perm/sec)   p_kst 2.093373e-04   p_cons 2.614130e-01   p_joint 2.093373e-04

Joint ci ratio: 1.484650e-01	ci left: 1.937691e-04	ci right 2.251288e-04	k: 696	n:3330000
Cons ci ratio: 3.610689e-03	ci left: 2.609506e-01	ci right 2.618948e-01	k: 870537	n:3330000
KS ci ratio: 1.484650e-01	ci left: 1.937691e-04	ci right 2.251288e-04	k: 696	n:3330000
SCN5A   3330000 perm   5034 sec   (661 perm/sec)   p_kst 2.090090e-04   p_cons 2.614225e-01   p_joint 2.090090e-04

Joint ci ratio: 1.482525e-01	ci left: 1.937655e-04	ci right 2.250758e-04	k: 698	n:3340000
Cons ci ratio: 3.605228e-03	ci left: 2.609570e-01	ci right 2.618997e-01	k: 873170	n:3340000
KS ci ratio: 1.482525e-01	ci left: 1.937655e-04	ci right 2.250758e-04	k: 698	n:3340000
SCN5A   3340000 perm   5063 sec   (660 perm/sec)   p_kst 2.089820e-04   p_cons 2.614281e-01   p_joint 2.089820e-04

Joint ci ratio: 1.478301e-01	ci left: 1.943369e-04	ci right 2.256422e-04	k: 702	n:3350000
Cons ci ratio: 3.599969e-03	ci left: 2.609442e-01	ci right 2.618855e-01	k: 875739	n:3350000
KS ci ratio: 1.478301e-01	ci left: 1.943369e-04	ci right 2.256422e-04	k: 702	n:3350000
SCN5A   3350000 perm   5091 sec   (658 perm/sec)   p_kst 2.095522e-04   p_cons 2.614146e-01   p_joint 2.095522e-04

Joint ci ratio: 1.477251e-01	ci left: 1.940451e-04	ci right 2.252792e-04	k: 703	n:3360000
Cons ci ratio: 3.594611e-03	ci left: 2.609445e-01	ci right 2.618845e-01	k: 878352	n:3360000
KS ci ratio: 1.477251e-01	ci left: 1.940451e-04	ci right 2.252792e-04	k: 703	n:3360000
SCN5A   3360000 perm   5120 sec   (656 perm/sec)   p_kst 2.092262e-04   p_cons 2.614143e-01   p_joint 2.092262e-04

Joint ci ratio: 1.473071e-01	ci left: 1.946125e-04	ci right 2.258415e-04	k: 707	n:3370000
Cons ci ratio: 3.589257e-03	ci left: 2.609469e-01	ci right 2.618855e-01	k: 880972	n:3370000
KS ci ratio: 1.473071e-01	ci left: 1.946125e-04	ci right 2.258415e-04	k: 707	n:3370000
SCN5A   3370000 perm   5148 sec   (655 perm/sec)   p_kst 2.097923e-04   p_cons 2.614160e-01   p_joint 2.097923e-04

Joint ci ratio: 1.470995e-01	ci left: 1.946066e-04	ci right 2.257868e-04	k: 709	n:3380000
Cons ci ratio: 3.583862e-03	ci left: 2.609565e-01	ci right 2.618937e-01	k: 883616	n:3380000
KS ci ratio: 1.470995e-01	ci left: 1.946066e-04	ci right 2.257868e-04	k: 709	n:3380000
SCN5A   3380000 perm   5177 sec   (653 perm/sec)   p_kst 2.097633e-04   p_cons 2.614249e-01   p_joint 2.097633e-04

Joint ci ratio: 1.468928e-01	ci left: 1.946008e-04	ci right 2.257324e-04	k: 711	n:3390000
Cons ci ratio: 3.578584e-03	ci left: 2.609559e-01	ci right 2.618917e-01	k: 886226	n:3390000
KS ci ratio: 1.468928e-01	ci left: 1.946008e-04	ci right 2.257324e-04	k: 711	n:3390000
SCN5A   3390000 perm   5205 sec   (651 perm/sec)   p_kst 2.097345e-04   p_cons 2.614236e-01   p_joint 2.097345e-04

Joint ci ratio: 1.464818e-01	ci left: 1.951618e-04	ci right 2.262881e-04	k: 715	n:3400000
Cons ci ratio: 3.573293e-03	ci left: 2.609592e-01	ci right 2.618936e-01	k: 888849	n:3400000
KS ci ratio: 1.464818e-01	ci left: 1.951618e-04	ci right 2.262881e-04	k: 715	n:3400000
SCN5A   3400000 perm   5234 sec   (650 perm/sec)   p_kst 2.102941e-04   p_cons 2.614262e-01   p_joint 2.102941e-04

Joint ci ratio: 1.463797e-01	ci left: 1.948719e-04	ci right 2.259285e-04	k: 716	n:3410000
Cons ci ratio: 3.567953e-03	ci left: 2.609703e-01	ci right 2.619034e-01	k: 891499	n:3410000
KS ci ratio: 1.463797e-01	ci left: 1.948719e-04	ci right 2.259285e-04	k: 716	n:3410000
SCN5A   3410000 perm   5263 sec   (648 perm/sec)   p_kst 2.099707e-04   p_cons 2.614367e-01   p_joint 2.099707e-04

Joint ci ratio: 1.460744e-01	ci left: 1.951472e-04	ci right 2.261771e-04	k: 719	n:3420000
Cons ci ratio: 3.562745e-03	ci left: 2.609697e-01	ci right 2.619014e-01	k: 894109	n:3420000
KS ci ratio: 1.460744e-01	ci left: 1.951472e-04	ci right 2.261771e-04	k: 719	n:3420000
SCN5A   3420000 perm   5292 sec   (646 perm/sec)   p_kst 2.102339e-04   p_cons 2.614354e-01   p_joint 2.102339e-04

Joint ci ratio: 1.458719e-01	ci left: 1.951401e-04	ci right 2.261221e-04	k: 721	n:3430000
Cons ci ratio: 3.557387e-03	ci left: 2.609878e-01	ci right 2.619182e-01	k: 896783	n:3430000
KS ci ratio: 1.458719e-01	ci left: 1.951401e-04	ci right 2.261221e-04	k: 721	n:3430000
SCN5A   3430000 perm   5320 sec   (645 perm/sec)   p_kst 2.102041e-04   p_cons 2.614528e-01   p_joint 2.102041e-04

Joint ci ratio: 1.457710e-01	ci left: 1.948529e-04	ci right 2.257661e-04	k: 722	n:3440000
Cons ci ratio: 3.552241e-03	ci left: 2.609854e-01	ci right 2.619144e-01	k: 899387	n:3440000
KS ci ratio: 1.457710e-01	ci left: 1.948529e-04	ci right 2.257661e-04	k: 722	n:3440000
SCN5A   3440000 perm   5349 sec   (643 perm/sec)   p_kst 2.098837e-04   p_cons 2.614497e-01   p_joint 2.098837e-04

Joint ci ratio: 1.455698e-01	ci left: 1.948467e-04	ci right 2.257125e-04	k: 724	n:3450000
Cons ci ratio: 3.547133e-03	ci left: 2.609813e-01	ci right 2.619090e-01	k: 901985	n:3450000
KS ci ratio: 1.455698e-01	ci left: 1.948467e-04	ci right 2.257125e-04	k: 724	n:3450000
SCN5A   3450000 perm   5379 sec   (641 perm/sec)   p_kst 2.098551e-04   p_cons 2.614449e-01   p_joint 2.098551e-04

Joint ci ratio: 1.452696e-01	ci left: 1.951191e-04	ci right 2.259587e-04	k: 727	n:3460000
Cons ci ratio: 3.541994e-03	ci left: 2.609830e-01	ci right 2.619093e-01	k: 904603	n:3460000
KS ci ratio: 1.452696e-01	ci left: 1.951191e-04	ci right 2.259587e-04	k: 727	n:3460000
SCN5A   3460000 perm   5407 sec   (640 perm/sec)   p_kst 2.101156e-04   p_cons 2.614460e-01   p_joint 2.101156e-04

Joint ci ratio: 1.448721e-01	ci left: 1.956677e-04	ci right 2.265021e-04	k: 731	n:3470000
Cons ci ratio: 3.536917e-03	ci left: 2.609804e-01	ci right 2.619053e-01	k: 907206	n:3470000
KS ci ratio: 1.448721e-01	ci left: 1.956677e-04	ci right 2.265021e-04	k: 731	n:3470000
SCN5A   3470000 perm   5436 sec   (638 perm/sec)   p_kst 2.106628e-04   p_cons 2.614427e-01   p_joint 2.106628e-04

Joint ci ratio: 1.445761e-01	ci left: 1.959363e-04	ci right 2.267445e-04	k: 734	n:3480000
Cons ci ratio: 3.531859e-03	ci left: 2.609780e-01	ci right 2.619017e-01	k: 909810	n:3480000
KS ci ratio: 1.445761e-01	ci left: 1.959363e-04	ci right 2.267445e-04	k: 734	n:3480000
SCN5A   3480000 perm   5465 sec   (637 perm/sec)   p_kst 2.109195e-04   p_cons 2.614397e-01   p_joint 2.109195e-04

Joint ci ratio: 1.445761e-01	ci left: 1.953748e-04	ci right 2.260948e-04	k: 734	n:3490000
Cons ci ratio: 3.526831e-03	ci left: 2.609749e-01	ci right 2.618972e-01	k: 912411	n:3490000
KS ci ratio: 1.445761e-01	ci left: 1.953748e-04	ci right 2.260948e-04	k: 734	n:3490000
SCN5A   3490000 perm   5494 sec   (635 perm/sec)   p_kst 2.103152e-04   p_cons 2.614358e-01   p_joint 2.103152e-04

Joint ci ratio: 1.441843e-01	ci left: 1.959182e-04	ci right 2.266329e-04	k: 738	n:3500000
Cons ci ratio: 3.521737e-03	ci left: 2.609811e-01	ci right 2.619021e-01	k: 915045	n:3500000
KS ci ratio: 1.441843e-01	ci left: 1.959182e-04	ci right 2.266329e-04	k: 738	n:3500000
SCN5A   3500000 perm   5524 sec   (634 perm/sec)   p_kst 2.108571e-04   p_cons 2.614414e-01   p_joint 2.108571e-04

Joint ci ratio: 1.441843e-01	ci left: 1.953600e-04	ci right 2.259872e-04	k: 738	n:3510000
Cons ci ratio: 3.516755e-03	ci left: 2.609777e-01	ci right 2.618974e-01	k: 917645	n:3510000
KS ci ratio: 1.441843e-01	ci left: 1.953600e-04	ci right 2.259872e-04	k: 738	n:3510000
SCN5A   3510000 perm   5552 sec   (632 perm/sec)   p_kst 2.102564e-04   p_cons 2.614373e-01   p_joint 2.102564e-04

Joint ci ratio: 1.439896e-01	ci left: 1.953527e-04	ci right 2.259339e-04	k: 740	n:3520000
Cons ci ratio: 3.511457e-03	ci left: 2.610112e-01	ci right 2.619296e-01	k: 920375	n:3520000
KS ci ratio: 1.439896e-01	ci left: 1.953527e-04	ci right 2.259339e-04	k: 740	n:3520000
SCN5A   3520000 perm   5582 sec   (631 perm/sec)   p_kst 2.102273e-04   p_cons 2.614702e-01   p_joint 2.102273e-04

Joint ci ratio: 1.437957e-01	ci left: 1.953455e-04	ci right 2.258808e-04	k: 742	n:3530000
Cons ci ratio: 3.506623e-03	ci left: 2.609960e-01	ci right 2.619131e-01	k: 922934	n:3530000
KS ci ratio: 1.437957e-01	ci left: 1.953455e-04	ci right 2.258808e-04	k: 742	n:3530000
SCN5A   3530000 perm   5612 sec   (629 perm/sec)   p_kst 2.101983e-04   p_cons 2.614544e-01   p_joint 2.101983e-04

Joint ci ratio: 1.437957e-01	ci left: 1.947937e-04	ci right 2.252427e-04	k: 742	n:3540000
Cons ci ratio: 3.501640e-03	ci left: 2.609996e-01	ci right 2.619154e-01	k: 925559	n:3540000
KS ci ratio: 1.437957e-01	ci left: 1.947937e-04	ci right 2.252427e-04	k: 742	n:3540000
SCN5A   3540000 perm   5641 sec   (628 perm/sec)   p_kst 2.096045e-04   p_cons 2.614573e-01   p_joint 2.096045e-04

Joint ci ratio: 1.436991e-01	ci left: 1.945165e-04	ci right 2.249001e-04	k: 743	n:3550000
Cons ci ratio: 3.496742e-03	ci left: 2.609962e-01	ci right 2.619107e-01	k: 928159	n:3550000
KS ci ratio: 1.436991e-01	ci left: 1.945165e-04	ci right 2.249001e-04	k: 743	n:3550000
SCN5A   3550000 perm   5670 sec   (626 perm/sec)   p_kst 2.092958e-04   p_cons 2.614532e-01   p_joint 2.092958e-04

Joint ci ratio: 1.436026e-01	ci left: 1.942409e-04	ci right 2.245593e-04	k: 744	n:3560000
Cons ci ratio: 3.491831e-03	ci left: 2.609964e-01	ci right 2.619096e-01	k: 930772	n:3560000
KS ci ratio: 1.436026e-01	ci left: 1.942409e-04	ci right 2.245593e-04	k: 744	n:3560000
SCN5A   3560000 perm   5700 sec   (625 perm/sec)   p_kst 2.089888e-04   p_cons 2.614528e-01   p_joint 2.089888e-04

Joint ci ratio: 1.432186e-01	ci left: 1.947771e-04	ci right 2.250909e-04	k: 748	n:3570000
Cons ci ratio: 3.486994e-03	ci left: 2.609907e-01	ci right 2.619027e-01	k: 933364	n:3570000
KS ci ratio: 1.432186e-01	ci left: 1.947771e-04	ci right 2.250909e-04	k: 748	n:3570000
SCN5A   3570000 perm   5729 sec   (623 perm/sec)   p_kst 2.095238e-04   p_cons 2.614465e-01   p_joint 2.095238e-04

Joint ci ratio: 1.430278e-01	ci left: 1.947717e-04	ci right 2.250408e-04	k: 750	n:3580000
Cons ci ratio: 3.482142e-03	ci left: 2.609890e-01	ci right 2.618997e-01	k: 935970	n:3580000
KS ci ratio: 1.430278e-01	ci left: 1.947717e-04	ci right 2.250408e-04	k: 750	n:3580000
SCN5A   3580000 perm   5757 sec   (622 perm/sec)   p_kst 2.094972e-04   p_cons 2.614441e-01   p_joint 2.094972e-04

Joint ci ratio: 1.425540e-01	ci left: 1.955721e-04	ci right 2.258564e-04	k: 755	n:3590000
Cons ci ratio: 3.477365e-03	ci left: 2.609812e-01	ci right 2.618905e-01	k: 938554	n:3590000
KS ci ratio: 1.425540e-01	ci left: 1.955721e-04	ci right 2.258564e-04	k: 755	n:3590000
SCN5A   3590000 perm   5787 sec   (620 perm/sec)   p_kst 2.103064e-04   p_cons 2.614357e-01   p_joint 2.103064e-04

Joint ci ratio: 1.420848e-01	ci left: 1.963683e-04	ci right 2.266674e-04	k: 760	n:3600000
Cons ci ratio: 3.472483e-03	ci left: 2.609872e-01	ci right 2.618954e-01	k: 941188	n:3600000
KS ci ratio: 1.420848e-01	ci left: 1.963683e-04	ci right 2.266674e-04	k: 760	n:3600000
SCN5A   3600000 perm   5817 sec   (619 perm/sec)   p_kst 2.111111e-04   p_cons 2.614411e-01   p_joint 2.111111e-04

Joint ci ratio: 1.418985e-01	ci left: 1.963587e-04	ci right 2.266132e-04	k: 762	n:3610000
Cons ci ratio: 3.467877e-03	ci left: 2.609648e-01	ci right 2.618716e-01	k: 943719	n:3610000
KS ci ratio: 1.418985e-01	ci left: 1.963587e-04	ci right 2.266132e-04	k: 762	n:3610000
SCN5A   3610000 perm   5847 sec   (617 perm/sec)   p_kst 2.110803e-04   p_cons 2.614180e-01   p_joint 2.110803e-04

Joint ci ratio: 1.416204e-01	ci left: 1.966156e-04	ci right 2.268453e-04	k: 765	n:3620000
Cons ci ratio: 3.463228e-03	ci left: 2.609493e-01	ci right 2.618549e-01	k: 946275	n:3620000
KS ci ratio: 1.416204e-01	ci left: 1.966156e-04	ci right 2.268453e-04	k: 765	n:3620000
SCN5A   3620000 perm   5878 sec   (616 perm/sec)   p_kst 2.113260e-04   p_cons 2.614019e-01   p_joint 2.113260e-04

Joint ci ratio: 1.416204e-01	ci left: 1.960740e-04	ci right 2.262203e-04	k: 765	n:3630000
Cons ci ratio: 3.458462e-03	ci left: 2.609491e-01	ci right 2.618534e-01	k: 948886	n:3630000
KS ci ratio: 1.416204e-01	ci left: 1.960740e-04	ci right 2.262203e-04	k: 765	n:3630000
SCN5A   3630000 perm   5909 sec   (614 perm/sec)   p_kst 2.107438e-04   p_cons 2.614011e-01   p_joint 2.107438e-04

Joint ci ratio: 1.414359e-01	ci left: 1.960653e-04	ci right 2.261678e-04	k: 767	n:3640000
Cons ci ratio: 3.453677e-03	ci left: 2.609533e-01	ci right 2.618564e-01	k: 951513	n:3640000
KS ci ratio: 1.414359e-01	ci left: 1.960653e-04	ci right 2.261678e-04	k: 767	n:3640000
SCN5A   3640000 perm   5939 sec   (613 perm/sec)   p_kst 2.107143e-04   p_cons 2.614047e-01   p_joint 2.107143e-04

Joint ci ratio: 1.412521e-01	ci left: 1.960567e-04	ci right 2.261154e-04	k: 769	n:3650000
Cons ci ratio: 3.448979e-03	ci left: 2.609498e-01	ci right 2.618516e-01	k: 954112	n:3650000
KS ci ratio: 1.412521e-01	ci left: 1.960567e-04	ci right 2.261154e-04	k: 769	n:3650000
SCN5A   3650000 perm   5969 sec   (612 perm/sec)   p_kst 2.106849e-04   p_cons 2.614005e-01   p_joint 2.106849e-04

Joint ci ratio: 1.408866e-01	ci left: 1.965753e-04	ci right 2.266291e-04	k: 773	n:3660000
Cons ci ratio: 3.444098e-03	ci left: 2.609690e-01	ci right 2.618696e-01	k: 956794	n:3660000
KS ci ratio: 1.408866e-01	ci left: 1.965753e-04	ci right 2.266291e-04	k: 773	n:3660000
SCN5A   3660000 perm   5999 sec   (610 perm/sec)   p_kst 2.112022e-04   p_cons 2.614191e-01   p_joint 2.112022e-04

Joint ci ratio: 1.407049e-01	ci left: 1.965655e-04	ci right 2.265757e-04	k: 775	n:3670000
Cons ci ratio: 3.439328e-03	ci left: 2.609780e-01	ci right 2.618774e-01	k: 959439	n:3670000
KS ci ratio: 1.407049e-01	ci left: 1.965655e-04	ci right 2.265757e-04	k: 775	n:3670000
SCN5A   3670000 perm   6029 sec   (609 perm/sec)   p_kst 2.111717e-04   p_cons 2.614275e-01   p_joint 2.111717e-04

Joint ci ratio: 1.402537e-01	ci left: 1.973423e-04	ci right 2.273664e-04	k: 780	n:3680000
Cons ci ratio: 3.434638e-03	ci left: 2.609802e-01	ci right 2.618783e-01	k: 962059	n:3680000
KS ci ratio: 1.402537e-01	ci left: 1.973423e-04	ci right 2.273664e-04	k: 780	n:3680000
SCN5A   3680000 perm   6060 sec   (607 perm/sec)   p_kst 2.119565e-04   p_cons 2.614291e-01   p_joint 2.119565e-04

Joint ci ratio: 1.399851e-01	ci left: 1.975920e-04	ci right 2.275917e-04	k: 783	n:3690000
Cons ci ratio: 3.429799e-03	ci left: 2.610013e-01	ci right 2.618983e-01	k: 964749	n:3690000
KS ci ratio: 1.399851e-01	ci left: 1.975920e-04	ci right 2.275917e-04	k: 783	n:3690000
SCN5A   3690000 perm   6090 sec   (606 perm/sec)   p_kst 2.121951e-04   p_cons 2.614496e-01   p_joint 2.121951e-04

Joint ci ratio: 1.398959e-01	ci left: 1.973188e-04	ci right 2.272563e-04	k: 784	n:3700000
Cons ci ratio: 3.425287e-03	ci left: 2.609877e-01	ci right 2.618835e-01	k: 967311	n:3700000
KS ci ratio: 1.398959e-01	ci left: 1.973188e-04	ci right 2.272563e-04	k: 784	n:3700000
SCN5A   3700000 perm   6122 sec   (604 perm/sec)   p_kst 2.118919e-04   p_cons 2.614354e-01   p_joint 2.118919e-04

Joint ci ratio: 1.398069e-01	ci left: 1.970470e-04	ci right 2.269228e-04	k: 785	n:3710000
Cons ci ratio: 3.420783e-03	ci left: 2.609753e-01	ci right 2.618698e-01	k: 969877	n:3710000
KS ci ratio: 1.398069e-01	ci left: 1.970470e-04	ci right 2.269228e-04	k: 785	n:3710000
SCN5A   3710000 perm   6152 sec   (603 perm/sec)   p_kst 2.115903e-04   p_cons 2.614224e-01   p_joint 2.115903e-04

Joint ci ratio: 1.393643e-01	ci left: 1.978145e-04	ci right 2.277037e-04	k: 790	n:3720000
Cons ci ratio: 3.416389e-03	ci left: 2.609525e-01	ci right 2.618458e-01	k: 972404	n:3720000
KS ci ratio: 1.393643e-01	ci left: 1.978145e-04	ci right 2.277037e-04	k: 790	n:3720000
SCN5A   3720000 perm   6182 sec   (602 perm/sec)   p_kst 2.123656e-04   p_cons 2.613989e-01   p_joint 2.123656e-04

Joint ci ratio: 1.391008e-01	ci left: 1.980604e-04	ci right 2.279256e-04	k: 793	n:3730000
Cons ci ratio: 3.411826e-03	ci left: 2.609509e-01	ci right 2.618430e-01	k: 975010	n:3730000
KS ci ratio: 1.391008e-01	ci left: 1.980604e-04	ci right 2.279256e-04	k: 793	n:3730000
SCN5A   3730000 perm   6213 sec   (600 perm/sec)   p_kst 2.126005e-04   p_cons 2.613968e-01   p_joint 2.126005e-04

Joint ci ratio: 1.391008e-01	ci left: 1.975308e-04	ci right 2.273161e-04	k: 793	n:3740000
Cons ci ratio: 3.407275e-03	ci left: 2.609499e-01	ci right 2.618408e-01	k: 977618	n:3740000
KS ci ratio: 1.391008e-01	ci left: 1.975308e-04	ci right 2.273161e-04	k: 793	n:3740000
SCN5A   3740000 perm   6244 sec   (599 perm/sec)   p_kst 2.120321e-04   p_cons 2.613952e-01   p_joint 2.120321e-04

Joint ci ratio: 1.388387e-01	ci left: 1.977763e-04	ci right 2.275378e-04	k: 796	n:3750000
Cons ci ratio: 3.402668e-03	ci left: 2.609575e-01	ci right 2.618472e-01	k: 980258	n:3750000
KS ci ratio: 1.388387e-01	ci left: 1.977763e-04	ci right 2.275378e-04	k: 796	n:3750000
SCN5A   3750000 perm   6275 sec   (598 perm/sec)   p_kst 2.122667e-04   p_cons 2.614021e-01   p_joint 2.122667e-04

Joint ci ratio: 1.385782e-01	ci left: 1.980205e-04	ci right 2.277581e-04	k: 799	n:3760000
Cons ci ratio: 3.398274e-03	ci left: 2.609429e-01	ci right 2.618314e-01	k: 982815	n:3760000
KS ci ratio: 1.385782e-01	ci left: 1.980205e-04	ci right 2.277581e-04	k: 799	n:3760000
SCN5A   3760000 perm   6306 sec   (596 perm/sec)   p_kst 2.125000e-04   p_cons 2.613870e-01   p_joint 2.125000e-04

Joint ci ratio: 1.384917e-01	ci left: 1.977513e-04	ci right 2.274284e-04	k: 800	n:3770000
Cons ci ratio: 3.393747e-03	ci left: 2.609454e-01	ci right 2.618327e-01	k: 985436	n:3770000
KS ci ratio: 1.384917e-01	ci left: 1.977513e-04	ci right 2.274284e-04	k: 800	n:3770000
SCN5A   3770000 perm   6337 sec   (595 perm/sec)   p_kst 2.122016e-04   p_cons 2.613889e-01   p_joint 2.122016e-04

Joint ci ratio: 1.383191e-01	ci left: 1.977389e-04	ci right 2.273742e-04	k: 802	n:3780000
Cons ci ratio: 3.389297e-03	ci left: 2.609412e-01	ci right 2.618274e-01	k: 988032	n:3780000
KS ci ratio: 1.383191e-01	ci left: 1.977389e-04	ci right 2.273742e-04	k: 802	n:3780000
SCN5A   3780000 perm   6369 sec   (594 perm/sec)   p_kst 2.121693e-04   p_cons 2.613841e-01   p_joint 2.121693e-04

Joint ci ratio: 1.379758e-01	ci left: 1.982361e-04	ci right 2.278661e-04	k: 806	n:3790000
Cons ci ratio: 3.384739e-03	ci left: 2.609514e-01	ci right 2.618363e-01	k: 990682	n:3790000
KS ci ratio: 1.379758e-01	ci left: 1.982361e-04	ci right 2.278661e-04	k: 806	n:3790000
SCN5A   3790000 perm   6400 sec   (592 perm/sec)   p_kst 2.126649e-04   p_cons 2.613937e-01   p_joint 2.126649e-04

Joint ci ratio: 1.377201e-01	ci left: 1.984767e-04	ci right 2.280832e-04	k: 809	n:3800000
Cons ci ratio: 3.380282e-03	ci left: 2.609520e-01	ci right 2.618358e-01	k: 993296	n:3800000
KS ci ratio: 1.377201e-01	ci left: 1.984767e-04	ci right 2.280832e-04	k: 809	n:3800000
SCN5A   3800000 perm   6432 sec   (591 perm/sec)   p_kst 2.128947e-04   p_cons 2.613937e-01   p_joint 2.128947e-04

Joint ci ratio: 1.375504e-01	ci left: 1.984626e-04	ci right 2.280275e-04	k: 811	n:3810000
Cons ci ratio: 3.376061e-03	ci left: 2.609276e-01	ci right 2.618103e-01	k: 995815	n:3810000
KS ci ratio: 1.375504e-01	ci left: 1.984626e-04	ci right 2.280275e-04	k: 811	n:3810000
SCN5A   3810000 perm   6463 sec   (590 perm/sec)   p_kst 2.128609e-04   p_cons 2.613688e-01   p_joint 2.128609e-04

Joint ci ratio: 1.375504e-01	ci left: 1.979431e-04	ci right 2.274306e-04	k: 811	n:3820000
Cons ci ratio: 3.371714e-03	ci left: 2.609197e-01	ci right 2.618011e-01	k: 998396	n:3820000
KS ci ratio: 1.375504e-01	ci left: 1.979431e-04	ci right 2.274306e-04	k: 811	n:3820000
SCN5A   3820000 perm   6495 sec   (588 perm/sec)   p_kst 2.123037e-04   p_cons 2.613602e-01   p_joint 2.123037e-04

Joint ci ratio: 1.374658e-01	ci left: 1.976783e-04	ci right 2.271068e-04	k: 812	n:3830000
Cons ci ratio: 3.367504e-03	ci left: 2.608979e-01	ci right 2.617782e-01	k: 1000924	n:3830000
KS ci ratio: 1.374658e-01	ci left: 1.976783e-04	ci right 2.271068e-04	k: 812	n:3830000
SCN5A   3830000 perm   6526 sec   (587 perm/sec)   p_kst 2.120104e-04   p_cons 2.613379e-01   p_joint 2.120104e-04

Joint ci ratio: 1.372970e-01	ci left: 1.976665e-04	ci right 2.270541e-04	k: 814	n:3840000
Cons ci ratio: 3.363097e-03	ci left: 2.609007e-01	ci right 2.617799e-01	k: 1003546	n:3840000
KS ci ratio: 1.372970e-01	ci left: 1.976665e-04	ci right 2.270541e-04	k: 814	n:3840000
SCN5A   3840000 perm   6558 sec   (586 perm/sec)   p_kst 2.119792e-04   p_cons 2.613401e-01   p_joint 2.119792e-04

Joint ci ratio: 1.370450e-01	ci left: 1.979056e-04	ci right 2.272703e-04	k: 817	n:3850000
Cons ci ratio: 3.358931e-03	ci left: 2.608778e-01	ci right 2.617558e-01	k: 1006069	n:3850000
KS ci ratio: 1.370450e-01	ci left: 1.979056e-04	ci right 2.272703e-04	k: 817	n:3850000
SCN5A   3850000 perm   6590 sec   (584 perm/sec)   p_kst 2.122078e-04   p_cons 2.613166e-01   p_joint 2.122078e-04

Joint ci ratio: 1.367944e-01	ci left: 1.981434e-04	ci right 2.274854e-04	k: 820	n:3860000
Cons ci ratio: 3.354670e-03	ci left: 2.608677e-01	ci right 2.617446e-01	k: 1008641	n:3860000
KS ci ratio: 1.367944e-01	ci left: 1.981434e-04	ci right 2.274854e-04	k: 820	n:3860000
SCN5A   3860000 perm   6622 sec   (583 perm/sec)   p_kst 2.124352e-04   p_cons 2.613060e-01   p_joint 2.124352e-04

Joint ci ratio: 1.365451e-01	ci left: 1.983801e-04	ci right 2.276992e-04	k: 823	n:3870000
Cons ci ratio: 3.350263e-03	ci left: 2.608763e-01	ci right 2.617520e-01	k: 1011285	n:3870000
KS ci ratio: 1.365451e-01	ci left: 1.983801e-04	ci right 2.276992e-04	k: 823	n:3870000
SCN5A   3870000 perm   6654 sec   (582 perm/sec)   p_kst 2.126615e-04   p_cons 2.613140e-01   p_joint 2.126615e-04

Joint ci ratio: 1.363797e-01	ci left: 1.983667e-04	ci right 2.276454e-04	k: 825	n:3880000
Cons ci ratio: 3.345852e-03	ci left: 2.608874e-01	ci right 2.617620e-01	k: 1013939	n:3880000
KS ci ratio: 1.363797e-01	ci left: 1.983667e-04	ci right 2.276454e-04	k: 825	n:3880000
SCN5A   3880000 perm   6686 sec   (580 perm/sec)   p_kst 2.126289e-04   p_cons 2.613245e-01   p_joint 2.126289e-04

Joint ci ratio: 1.362149e-01	ci left: 1.983534e-04	ci right 2.275919e-04	k: 827	n:3890000
Cons ci ratio: 3.341451e-03	ci left: 2.608992e-01	ci right 2.617727e-01	k: 1016596	n:3890000
KS ci ratio: 1.362149e-01	ci left: 1.983534e-04	ci right 2.275919e-04	k: 827	n:3890000
SCN5A   3890000 perm   6719 sec   (579 perm/sec)   p_kst 2.125964e-04   p_cons 2.613357e-01   p_joint 2.125964e-04

Joint ci ratio: 1.359688e-01	ci left: 1.985878e-04	ci right 2.278037e-04	k: 830	n:3900000
Cons ci ratio: 3.337154e-03	ci left: 2.609009e-01	ci right 2.617733e-01	k: 1019214	n:3900000
KS ci ratio: 1.359688e-01	ci left: 1.985878e-04	ci right 2.278037e-04	k: 830	n:3900000
SCN5A   3900000 perm   6751 sec   (578 perm/sec)   p_kst 2.128205e-04   p_cons 2.613369e-01   p_joint 2.128205e-04

Joint ci ratio: 1.358871e-01	ci left: 1.983270e-04	ci right 2.274855e-04	k: 831	n:3910000
Cons ci ratio: 3.332781e-03	ci left: 2.609134e-01	ci right 2.617847e-01	k: 1021874	n:3910000
KS ci ratio: 1.358871e-01	ci left: 1.983270e-04	ci right 2.274855e-04	k: 831	n:3910000
SCN5A   3910000 perm   6783 sec   (576 perm/sec)   p_kst 2.125320e-04   p_cons 2.613488e-01   p_joint 2.125320e-04

Joint ci ratio: 1.358055e-01	ci left: 1.980675e-04	ci right 2.271690e-04	k: 832	n:3920000
Cons ci ratio: 3.328478e-03	ci left: 2.609197e-01	ci right 2.617898e-01	k: 1024510	n:3920000
KS ci ratio: 1.358055e-01	ci left: 1.980675e-04	ci right 2.271690e-04	k: 832	n:3920000
SCN5A   3920000 perm   6816 sec   (575 perm/sec)   p_kst 2.122449e-04   p_cons 2.613546e-01   p_joint 2.122449e-04

Joint ci ratio: 1.355616e-01	ci left: 1.983009e-04	ci right 2.273802e-04	k: 835	n:3930000
Cons ci ratio: 3.324069e-03	ci left: 2.609402e-01	ci right 2.618093e-01	k: 1027202	n:3930000
KS ci ratio: 1.355616e-01	ci left: 1.983009e-04	ci right 2.273802e-04	k: 835	n:3930000
SCN5A   3930000 perm   6849 sec   (574 perm/sec)   p_kst 2.124682e-04   p_cons 2.613746e-01   p_joint 2.124682e-04

Joint ci ratio: 1.354806e-01	ci left: 1.980428e-04	ci right 2.270655e-04	k: 836	n:3940000
Cons ci ratio: 3.319978e-03	ci left: 2.609256e-01	ci right 2.617935e-01	k: 1029756	n:3940000
KS ci ratio: 1.354806e-01	ci left: 1.980428e-04	ci right 2.270655e-04	k: 836	n:3940000
SCN5A   3940000 perm   6882 sec   (573 perm/sec)   p_kst 2.121827e-04   p_cons 2.613594e-01   p_joint 2.121827e-04

Joint ci ratio: 1.353998e-01	ci left: 1.977860e-04	ci right 2.267524e-04	k: 837	n:3950000
Cons ci ratio: 3.315683e-03	ci left: 2.609366e-01	ci right 2.618035e-01	k: 1032411	n:3950000
KS ci ratio: 1.353998e-01	ci left: 1.977860e-04	ci right 2.267524e-04	k: 837	n:3950000
SCN5A   3950000 perm   6915 sec   (571 perm/sec)   p_kst 2.118987e-04   p_cons 2.613699e-01   p_joint 2.118987e-04

Joint ci ratio: 1.350777e-01	ci left: 1.982625e-04	ci right 2.272240e-04	k: 841	n:3960000
Cons ci ratio: 3.311632e-03	ci left: 2.609211e-01	ci right 2.617868e-01	k: 1034961	n:3960000
KS ci ratio: 1.350777e-01	ci left: 1.982625e-04	ci right 2.272240e-04	k: 841	n:3960000
SCN5A   3960000 perm   6948 sec   (570 perm/sec)   p_kst 2.123737e-04   p_cons 2.613538e-01   p_joint 2.123737e-04

Joint ci ratio: 1.347580e-01	ci left: 1.987366e-04	ci right 2.276932e-04	k: 845	n:3970000
Cons ci ratio: 3.307589e-03	ci left: 2.609064e-01	ci right 2.617710e-01	k: 1037514	n:3970000
KS ci ratio: 1.347580e-01	ci left: 1.987366e-04	ci right 2.276932e-04	k: 845	n:3970000
SCN5A   3970000 perm   6980 sec   (569 perm/sec)   p_kst 2.128463e-04   p_cons 2.613385e-01   p_joint 2.128463e-04

Joint ci ratio: 1.345990e-01	ci left: 1.987229e-04	ci right 2.276406e-04	k: 847	n:3980000
Cons ci ratio: 3.303451e-03	ci left: 2.609046e-01	ci right 2.617681e-01	k: 1040118	n:3980000
KS ci ratio: 1.345990e-01	ci left: 1.987229e-04	ci right 2.276406e-04	k: 847	n:3980000
SCN5A   3980000 perm   7013 sec   (568 perm/sec)   p_kst 2.128141e-04   p_cons 2.613362e-01   p_joint 2.128141e-04

Joint ci ratio: 1.344406e-01	ci left: 1.987092e-04	ci right 2.275882e-04	k: 849	n:3990000
Cons ci ratio: 3.299303e-03	ci left: 2.609058e-01	ci right 2.617682e-01	k: 1042734	n:3990000
KS ci ratio: 1.344406e-01	ci left: 1.987092e-04	ci right 2.275882e-04	k: 849	n:3990000
SCN5A   3990000 perm   7045 sec   (566 perm/sec)   p_kst 2.127820e-04   p_cons 2.613368e-01   p_joint 2.127820e-04

Joint ci ratio: 1.343616e-01	ci left: 1.984540e-04	ci right 2.272776e-04	k: 850	n:4000000
Cons ci ratio: 3.295147e-03	ci left: 2.609097e-01	ci right 2.617711e-01	k: 1045361	n:4000000
KS ci ratio: 1.343616e-01	ci left: 1.984540e-04	ci right 2.272776e-04	k: 850	n:4000000
SCN5A   4000000 perm   7077 sec   (565 perm/sec)   p_kst 2.125000e-04   p_cons 2.613402e-01   p_joint 2.125000e-04

Joint ci ratio: 1.342827e-01	ci left: 1.982001e-04	ci right 2.269686e-04	k: 851	n:4010000
Cons ci ratio: 3.290952e-03	ci left: 2.609201e-01	ci right 2.617805e-01	k: 1048014	n:4010000
KS ci ratio: 1.342827e-01	ci left: 1.982001e-04	ci right 2.269686e-04	k: 851	n:4010000
SCN5A   4010000 perm   7110 sec   (564 perm/sec)   p_kst 2.122195e-04   p_cons 2.613501e-01   p_joint 2.122195e-04

Joint ci ratio: 1.342040e-01	ci left: 1.979475e-04	ci right 2.266611e-04	k: 852	n:4020000
Cons ci ratio: 3.286713e-03	ci left: 2.609375e-01	ci right 2.617967e-01	k: 1050695	n:4020000
KS ci ratio: 1.342040e-01	ci left: 1.979475e-04	ci right 2.266611e-04	k: 852	n:4020000
SCN5A   4020000 perm   7142 sec   (563 perm/sec)   p_kst 2.119403e-04   p_cons 2.613669e-01   p_joint 2.119403e-04

Joint ci ratio: 1.340469e-01	ci left: 1.979359e-04	ci right 2.266116e-04	k: 854	n:4030000
Cons ci ratio: 3.282660e-03	ci left: 2.609348e-01	ci right 2.617930e-01	k: 1053296	n:4030000
KS ci ratio: 1.340469e-01	ci left: 1.979359e-04	ci right 2.266116e-04	k: 854	n:4030000
SCN5A   4030000 perm   7174 sec   (562 perm/sec)   p_kst 2.119107e-04   p_cons 2.613638e-01   p_joint 2.119107e-04

Joint ci ratio: 1.339686e-01	ci left: 1.976852e-04	ci right 2.263065e-04	k: 855	n:4040000
Cons ci ratio: 3.278585e-03	ci left: 2.609365e-01	ci right 2.617936e-01	k: 1055914	n:4040000
KS ci ratio: 1.339686e-01	ci left: 1.976852e-04	ci right 2.263065e-04	k: 855	n:4040000
SCN5A   4040000 perm   7207 sec   (561 perm/sec)   p_kst 2.116337e-04   p_cons 2.613649e-01   p_joint 2.116337e-04

Joint ci ratio: 1.336567e-01	ci left: 1.981517e-04	ci right 2.267684e-04	k: 859	n:4050000
Cons ci ratio: 3.274451e-03	ci left: 2.609469e-01	ci right 2.618030e-01	k: 1058568	n:4050000
KS ci ratio: 1.336567e-01	ci left: 1.981517e-04	ci right 2.267684e-04	k: 859	n:4050000
SCN5A   4050000 perm   7240 sec   (559 perm/sec)   p_kst 2.120988e-04   p_cons 2.613748e-01   p_joint 2.120988e-04

Joint ci ratio: 1.335015e-01	ci left: 1.981398e-04	ci right 2.267189e-04	k: 861	n:4060000
Cons ci ratio: 3.270448e-03	ci left: 2.609436e-01	ci right 2.617986e-01	k: 1061166	n:4060000
KS ci ratio: 1.335015e-01	ci left: 1.981398e-04	ci right 2.267189e-04	k: 861	n:4060000
SCN5A   4060000 perm   7273 sec   (558 perm/sec)   p_kst 2.120690e-04   p_cons 2.613709e-01   p_joint 2.120690e-04

Joint ci ratio: 1.332698e-01	ci left: 1.983655e-04	ci right 2.269235e-04	k: 864	n:4070000
Cons ci ratio: 3.266388e-03	ci left: 2.609489e-01	ci right 2.618028e-01	k: 1063799	n:4070000
KS ci ratio: 1.332698e-01	ci left: 1.983655e-04	ci right 2.269235e-04	k: 864	n:4070000
SCN5A   4070000 perm   7306 sec   (557 perm/sec)   p_kst 2.122850e-04   p_cons 2.613757e-01   p_joint 2.122850e-04

Joint ci ratio: 1.331929e-01	ci left: 1.981162e-04	ci right 2.266206e-04	k: 865	n:4080000
Cons ci ratio: 3.262507e-03	ci left: 2.609347e-01	ci right 2.617877e-01	k: 1066353	n:4080000
KS ci ratio: 1.331929e-01	ci left: 1.981162e-04	ci right 2.266206e-04	k: 865	n:4080000
SCN5A   4080000 perm   7340 sec   (556 perm/sec)   p_kst 2.120098e-04   p_cons 2.613610e-01   p_joint 2.120098e-04

Joint ci ratio: 1.331929e-01	ci left: 1.976318e-04	ci right 2.260665e-04	k: 865	n:4090000
Cons ci ratio: 3.258389e-03	ci left: 2.609503e-01	ci right 2.618022e-01	k: 1069028	n:4090000
KS ci ratio: 1.331929e-01	ci left: 1.976318e-04	ci right 2.260665e-04	k: 865	n:4090000
SCN5A   4090000 perm   7374 sec   (555 perm/sec)   p_kst 2.114914e-04   p_cons 2.613760e-01   p_joint 2.114914e-04

Joint ci ratio: 1.331929e-01	ci left: 1.971498e-04	ci right 2.255151e-04	k: 865	n:4100000
Cons ci ratio: 3.254427e-03	ci left: 2.609491e-01	ci right 2.618000e-01	k: 1071635	n:4100000
KS ci ratio: 1.331929e-01	ci left: 1.971498e-04	ci right 2.255151e-04	k: 865	n:4100000
SCN5A   4100000 perm   7408 sec   (553 perm/sec)   p_kst 2.109756e-04   p_cons 2.613744e-01   p_joint 2.109756e-04

Joint ci ratio: 1.329628e-01	ci left: 1.973757e-04	ci right 2.257207e-04	k: 868	n:4110000
Cons ci ratio: 3.250577e-03	ci left: 2.609363e-01	ci right 2.617861e-01	k: 1074194	n:4110000
KS ci ratio: 1.329628e-01	ci left: 1.973757e-04	ci right 2.257207e-04	k: 868	n:4110000
SCN5A   4110000 perm   7442 sec   (552 perm/sec)   p_kst 2.111922e-04   p_cons 2.613611e-01   p_joint 2.111922e-04

Joint ci ratio: 1.328101e-01	ci left: 1.973660e-04	ci right 2.256744e-04	k: 870	n:4120000
Cons ci ratio: 3.246654e-03	ci left: 2.609340e-01	ci right 2.617828e-01	k: 1076796	n:4120000
KS ci ratio: 1.328101e-01	ci left: 1.973660e-04	ci right 2.256744e-04	k: 870	n:4120000
SCN5A   4120000 perm   7475 sec   (551 perm/sec)   p_kst 2.111650e-04   p_cons 2.613583e-01   p_joint 2.111650e-04

Joint ci ratio: 1.328101e-01	ci left: 1.968881e-04	ci right 2.251279e-04	k: 870	n:4130000
Cons ci ratio: 3.242856e-03	ci left: 2.609184e-01	ci right 2.617662e-01	k: 1079343	n:4130000
KS ci ratio: 1.328101e-01	ci left: 1.968881e-04	ci right 2.251279e-04	k: 870	n:4130000
SCN5A   4130000 perm   7508 sec   (550 perm/sec)   p_kst 2.106538e-04   p_cons 2.613421e-01   p_joint 2.106538e-04

Joint ci ratio: 1.327340e-01	ci left: 1.966460e-04	ci right 2.248337e-04	k: 871	n:4140000
Cons ci ratio: 3.239040e-03	ci left: 2.609068e-01	ci right 2.617535e-01	k: 1081906	n:4140000
KS ci ratio: 1.327340e-01	ci left: 1.966460e-04	ci right 2.248337e-04	k: 871	n:4140000
SCN5A   4140000 perm   7541 sec   (549 perm/sec)   p_kst 2.103865e-04   p_cons 2.613300e-01   p_joint 2.103865e-04

Joint ci ratio: 1.325062e-01	ci left: 1.968711e-04	ci right 2.250388e-04	k: 874	n:4150000
Cons ci ratio: 3.235059e-03	ci left: 2.609164e-01	ci right 2.617620e-01	k: 1084557	n:4150000
KS ci ratio: 1.325062e-01	ci left: 1.968711e-04	ci right 2.250388e-04	k: 874	n:4150000
SCN5A   4150000 perm   7576 sec   (548 perm/sec)   p_kst 2.106024e-04   p_cons 2.613390e-01   p_joint 2.106024e-04

Joint ci ratio: 1.324306e-01	ci left: 1.966303e-04	ci right 2.247462e-04	k: 875	n:4160000
Cons ci ratio: 3.230958e-03	ci left: 2.609420e-01	ci right 2.617867e-01	k: 1087275	n:4160000
KS ci ratio: 1.324306e-01	ci left: 1.966303e-04	ci right 2.247462e-04	k: 875	n:4160000
SCN5A   4160000 perm   7610 sec   (547 perm/sec)   p_kst 2.103365e-04   p_cons 2.613642e-01   p_joint 2.103365e-04

Joint ci ratio: 1.322044e-01	ci left: 1.968543e-04	ci right 2.249505e-04	k: 878	n:4170000
Cons ci ratio: 3.227199e-03	ci left: 2.609285e-01	ci right 2.617721e-01	k: 1089830	n:4170000
KS ci ratio: 1.322044e-01	ci left: 1.968543e-04	ci right 2.249505e-04	k: 878	n:4170000
SCN5A   4170000 perm   7644 sec   (546 perm/sec)   p_kst 2.105516e-04   p_cons 2.613501e-01   p_joint 2.105516e-04

Joint ci ratio: 1.322044e-01	ci left: 1.963834e-04	ci right 2.244123e-04	k: 878	n:4180000
Cons ci ratio: 3.223373e-03	ci left: 2.609245e-01	ci right 2.617672e-01	k: 1092425	n:4180000
KS ci ratio: 1.322044e-01	ci left: 1.963834e-04	ci right 2.244123e-04	k: 878	n:4180000
SCN5A   4180000 perm   7679 sec   (544 perm/sec)   p_kst 2.100478e-04   p_cons 2.613457e-01   p_joint 2.100478e-04

Joint ci ratio: 1.321293e-01	ci left: 1.961455e-04	ci right 2.241233e-04	k: 879	n:4190000
Cons ci ratio: 3.219501e-03	ci left: 2.609278e-01	ci right 2.617694e-01	k: 1095050	n:4190000
KS ci ratio: 1.321293e-01	ci left: 1.961455e-04	ci right 2.241233e-04	k: 879	n:4190000
SCN5A   4190000 perm   7714 sec   (543 perm/sec)   p_kst 2.097852e-04   p_cons 2.613484e-01   p_joint 2.097852e-04

Joint ci ratio: 1.321293e-01	ci left: 1.956784e-04	ci right 2.235896e-04	k: 879	n:4200000
Cons ci ratio: 3.215604e-03	ci left: 2.609358e-01	ci right 2.617764e-01	k: 1097695	n:4200000
KS ci ratio: 1.321293e-01	ci left: 1.956784e-04	ci right 2.235896e-04	k: 879	n:4200000
SCN5A   4200000 perm   7749 sec   (542 perm/sec)   p_kst 2.092857e-04   p_cons 2.613560e-01   p_joint 2.092857e-04

Joint ci ratio: 1.318300e-01	ci left: 1.961324e-04	ci right 2.240400e-04	k: 883	n:4210000
Cons ci ratio: 3.211803e-03	ci left: 2.609338e-01	ci right 2.617734e-01	k: 1100298	n:4210000
KS ci ratio: 1.318300e-01	ci left: 1.961324e-04	ci right 2.240400e-04	k: 883	n:4210000
SCN5A   4210000 perm   7784 sec   (541 perm/sec)   p_kst 2.097387e-04   p_cons 2.613534e-01   p_joint 2.097387e-04

Joint ci ratio: 1.318300e-01	ci left: 1.956676e-04	ci right 2.235091e-04	k: 883	n:4220000
Cons ci ratio: 3.207851e-03	ci left: 2.609517e-01	ci right 2.617903e-01	k: 1102985	n:4220000
KS ci ratio: 1.318300e-01	ci left: 1.956676e-04	ci right 2.235091e-04	k: 883	n:4220000
SCN5A   4220000 perm   7818 sec   (540 perm/sec)   p_kst 2.092417e-04   p_cons 2.613709e-01   p_joint 2.092417e-04

Joint ci ratio: 1.317556e-01	ci left: 1.954337e-04	ci right 2.232249e-04	k: 884	n:4230000
Cons ci ratio: 3.204113e-03	ci left: 2.609454e-01	ci right 2.617831e-01	k: 1105570	n:4230000
KS ci ratio: 1.317556e-01	ci left: 1.954337e-04	ci right 2.232249e-04	k: 884	n:4230000
SCN5A   4230000 perm   7853 sec   (539 perm/sec)   p_kst 2.089835e-04   p_cons 2.613641e-01   p_joint 2.089835e-04

Joint ci ratio: 1.314588e-01	ci left: 1.958851e-04	ci right 2.236729e-04	k: 888	n:4240000
Cons ci ratio: 3.200469e-03	ci left: 2.609295e-01	ci right 2.617661e-01	k: 1108114	n:4240000
KS ci ratio: 1.314588e-01	ci left: 1.958851e-04	ci right 2.236729e-04	k: 888	n:4240000
SCN5A   4240000 perm   7889 sec   (537 perm/sec)   p_kst 2.094340e-04   p_cons 2.613476e-01   p_joint 2.094340e-04

Joint ci ratio: 1.313112e-01	ci left: 1.958793e-04	ci right 2.236326e-04	k: 890	n:4250000
Cons ci ratio: 3.196710e-03	ci left: 2.609289e-01	ci right 2.617646e-01	k: 1110723	n:4250000
KS ci ratio: 1.313112e-01	ci left: 1.958793e-04	ci right 2.236326e-04	k: 890	n:4250000
SCN5A   4250000 perm   7924 sec   (536 perm/sec)   p_kst 2.094118e-04   p_cons 2.613466e-01   p_joint 2.094118e-04

Joint ci ratio: 1.310906e-01	ci left: 1.961006e-04	ci right 2.238350e-04	k: 893	n:4260000
Cons ci ratio: 3.193126e-03	ci left: 2.609089e-01	ci right 2.617436e-01	k: 1113249	n:4260000
KS ci ratio: 1.310906e-01	ci left: 1.961006e-04	ci right 2.238350e-04	k: 893	n:4260000
SCN5A   4260000 perm   7959 sec   (535 perm/sec)   p_kst 2.096244e-04   p_cons 2.613261e-01   p_joint 2.096244e-04

Joint ci ratio: 1.309443e-01	ci left: 1.960944e-04	ci right 2.237945e-04	k: 895	n:4270000
Cons ci ratio: 3.189418e-03	ci left: 2.609053e-01	ci right 2.617390e-01	k: 1115845	n:4270000
KS ci ratio: 1.309443e-01	ci left: 1.960944e-04	ci right 2.237945e-04	k: 895	n:4270000
SCN5A   4270000 perm   7992 sec   (534 perm/sec)   p_kst 2.096019e-04   p_cons 2.613220e-01   p_joint 2.096019e-04

Joint ci ratio: 1.306529e-01	ci left: 1.965402e-04	ci right 2.242368e-04	k: 899	n:4280000
Cons ci ratio: 3.185603e-03	ci left: 2.609163e-01	ci right 2.617490e-01	k: 1118503	n:4280000
KS ci ratio: 1.306529e-01	ci left: 1.965402e-04	ci right 2.242368e-04	k: 899	n:4280000
SCN5A   4280000 perm   8027 sec   (533 perm/sec)   p_kst 2.100467e-04   p_cons 2.613325e-01   p_joint 2.100467e-04

Joint ci ratio: 1.305804e-01	ci left: 1.963076e-04	ci right 2.239548e-04	k: 900	n:4290000
Cons ci ratio: 3.181995e-03	ci left: 2.609039e-01	ci right 2.617356e-01	k: 1121061	n:4290000
KS ci ratio: 1.305804e-01	ci left: 1.963076e-04	ci right 2.239548e-04	k: 900	n:4290000
SCN5A   4290000 perm   8062 sec   (532 perm/sec)   p_kst 2.097902e-04   p_cons 2.613196e-01   p_joint 2.097902e-04

Joint ci ratio: 1.305080e-01	ci left: 1.960760e-04	ci right 2.236741e-04	k: 901	n:4300000
Cons ci ratio: 3.178371e-03	ci left: 2.608948e-01	ci right 2.617255e-01	k: 1123633	n:4300000
KS ci ratio: 1.305080e-01	ci left: 1.960760e-04	ci right 2.236741e-04	k: 901	n:4300000
SCN5A   4300000 perm   8097 sec   (531 perm/sec)   p_kst 2.095349e-04   p_cons 2.613100e-01   p_joint 2.095349e-04

Joint ci ratio: 1.302915e-01	ci left: 1.962944e-04	ci right 2.238739e-04	k: 904	n:4310000
Cons ci ratio: 3.174919e-03	ci left: 2.608665e-01	ci right 2.616962e-01	k: 1126122	n:4310000
KS ci ratio: 1.302915e-01	ci left: 1.962944e-04	ci right 2.238739e-04	k: 904	n:4310000
SCN5A   4310000 perm   8133 sec   (530 perm/sec)   p_kst 2.097448e-04   p_cons 2.612812e-01   p_joint 2.097448e-04

Joint ci ratio: 1.300045e-01	ci left: 1.967358e-04	ci right 2.243117e-04	k: 908	n:4320000
Cons ci ratio: 3.171221e-03	ci left: 2.608696e-01	ci right 2.616984e-01	k: 1128746	n:4320000
KS ci ratio: 1.300045e-01	ci left: 1.967358e-04	ci right 2.243117e-04	k: 908	n:4320000
SCN5A   4320000 perm   8168 sec   (529 perm/sec)   p_kst 2.101852e-04   p_cons 2.612838e-01   p_joint 2.101852e-04

Joint ci ratio: 1.299331e-01	ci left: 1.965049e-04	ci right 2.240322e-04	k: 909	n:4330000
Cons ci ratio: 3.167577e-03	ci left: 2.608675e-01	ci right 2.616954e-01	k: 1131348	n:4330000
KS ci ratio: 1.299331e-01	ci left: 1.965049e-04	ci right 2.240322e-04	k: 909	n:4330000
SCN5A   4330000 perm   8202 sec   (528 perm/sec)   p_kst 2.099307e-04   p_cons 2.612813e-01   p_joint 2.099307e-04

Joint ci ratio: 1.298617e-01	ci left: 1.962750e-04	ci right 2.237538e-04	k: 910	n:4340000
Cons ci ratio: 3.164086e-03	ci left: 2.608485e-01	ci right 2.616753e-01	k: 1133876	n:4340000
KS ci ratio: 1.298617e-01	ci left: 1.962750e-04	ci right 2.237538e-04	k: 910	n:4340000
SCN5A   4340000 perm   8238 sec   (527 perm/sec)   p_kst 2.096774e-04   p_cons 2.612618e-01   p_joint 2.096774e-04

Joint ci ratio: 1.298618e-01	ci left: 1.958238e-04	ci right 2.232395e-04	k: 910	n:4350000
Cons ci ratio: 3.160488e-03	ci left: 2.608440e-01	ci right 2.616699e-01	k: 1136467	n:4350000
KS ci ratio: 1.298618e-01	ci left: 1.958238e-04	ci right 2.232395e-04	k: 910	n:4350000
SCN5A   4350000 perm   8273 sec   (526 perm/sec)   p_kst 2.091954e-04   p_cons 2.612568e-01   p_joint 2.091954e-04

Joint ci ratio: 1.296485e-01	ci left: 1.960404e-04	ci right 2.234379e-04	k: 913	n:4360000
Cons ci ratio: 3.156846e-03	ci left: 2.608464e-01	ci right 2.616714e-01	k: 1139088	n:4360000
KS ci ratio: 1.296485e-01	ci left: 1.960404e-04	ci right 2.234379e-04	k: 913	n:4360000
SCN5A   4360000 perm   8309 sec   (525 perm/sec)   p_kst 2.094037e-04   p_cons 2.612587e-01   p_joint 2.094037e-04

Joint ci ratio: 1.295776e-01	ci left: 1.958132e-04	ci right 2.231628e-04	k: 914	n:4370000
Cons ci ratio: 3.153233e-03	ci left: 2.608467e-01	ci right 2.616708e-01	k: 1141700	n:4370000
KS ci ratio: 1.295776e-01	ci left: 1.958132e-04	ci right 2.231628e-04	k: 914	n:4370000
SCN5A   4370000 perm   8346 sec   (524 perm/sec)   p_kst 2.091533e-04   p_cons 2.612586e-01   p_joint 2.091533e-04

Joint ci ratio: 1.295069e-01	ci left: 1.955871e-04	ci right 2.228890e-04	k: 915	n:4380000
Cons ci ratio: 3.149617e-03	ci left: 2.608489e-01	ci right 2.616720e-01	k: 1144320	n:4380000
KS ci ratio: 1.295069e-01	ci left: 1.955871e-04	ci right 2.228890e-04	k: 915	n:4380000
SCN5A   4380000 perm   8382 sec   (523 perm/sec)   p_kst 2.089041e-04   p_cons 2.612603e-01   p_joint 2.089041e-04

Joint ci ratio: 1.295069e-01	ci left: 1.951416e-04	ci right 2.223813e-04	k: 915	n:4390000
Cons ci ratio: 3.145977e-03	ci left: 2.608556e-01	ci right 2.616777e-01	k: 1146960	n:4390000
KS ci ratio: 1.295069e-01	ci left: 1.951416e-04	ci right 2.223813e-04	k: 915	n:4390000
SCN5A   4390000 perm   8419 sec   (521 perm/sec)   p_kst 2.084282e-04   p_cons 2.612665e-01   p_joint 2.084282e-04

Joint ci ratio: 1.295069e-01	ci left: 1.946981e-04	ci right 2.218759e-04	k: 915	n:4400000
Cons ci ratio: 3.142335e-03	ci left: 2.608641e-01	ci right 2.616853e-01	k: 1149608	n:4400000
KS ci ratio: 1.295069e-01	ci left: 1.946981e-04	ci right 2.218759e-04	k: 915	n:4400000
SCN5A   4400000 perm   8454 sec   (520 perm/sec)   p_kst 2.079545e-04   p_cons 2.612745e-01   p_joint 2.079545e-04

Joint ci ratio: 1.292954e-01	ci left: 1.949148e-04	ci right 2.220750e-04	k: 918	n:4410000
Cons ci ratio: 3.138788e-03	ci left: 2.608623e-01	ci right 2.616826e-01	k: 1152211	n:4410000
KS ci ratio: 1.292954e-01	ci left: 1.949148e-04	ci right 2.220750e-04	k: 918	n:4410000
SCN5A   4410000 perm   8490 sec   (519 perm/sec)   p_kst 2.081633e-04   p_cons 2.612723e-01   p_joint 2.081633e-04

Joint ci ratio: 1.292954e-01	ci left: 1.944738e-04	ci right 2.215726e-04	k: 918	n:4420000
Cons ci ratio: 3.135082e-03	ci left: 2.608816e-01	ci right 2.617010e-01	k: 1154907	n:4420000
KS ci ratio: 1.292954e-01	ci left: 1.944738e-04	ci right 2.215726e-04	k: 918	n:4420000
SCN5A   4420000 perm   8527 sec   (518 perm/sec)   p_kst 2.076923e-04   p_cons 2.612912e-01   p_joint 2.076923e-04

Joint ci ratio: 1.292251e-01	ci left: 1.942533e-04	ci right 2.213055e-04	k: 919	n:4430000
Cons ci ratio: 3.131503e-03	ci left: 2.608869e-01	ci right 2.617053e-01	k: 1157541	n:4430000
KS ci ratio: 1.292251e-01	ci left: 1.942533e-04	ci right 2.213055e-04	k: 919	n:4430000
SCN5A   4430000 perm   8563 sec   (517 perm/sec)   p_kst 2.074492e-04   p_cons 2.612959e-01   p_joint 2.074492e-04

Joint ci ratio: 1.291550e-01	ci left: 1.940337e-04	ci right 2.210395e-04	k: 920	n:4440000
Cons ci ratio: 3.127997e-03	ci left: 2.608846e-01	ci right 2.617022e-01	k: 1160142	n:4440000
KS ci ratio: 1.291550e-01	ci left: 1.940337e-04	ci right 2.210395e-04	k: 920	n:4440000
SCN5A   4440000 perm   8599 sec   (516 perm/sec)   p_kst 2.072072e-04   p_cons 2.612932e-01   p_joint 2.072072e-04

Joint ci ratio: 1.290150e-01	ci left: 1.940326e-04	ci right 2.210068e-04	k: 922	n:4450000
Cons ci ratio: 3.124360e-03	ci left: 2.608999e-01	ci right 2.617166e-01	k: 1162821	n:4450000
KS ci ratio: 1.290150e-01	ci left: 1.940326e-04	ci right 2.210068e-04	k: 922	n:4450000
SCN5A   4450000 perm   8636 sec   (515 perm/sec)   p_kst 2.071910e-04   p_cons 2.613081e-01   p_joint 2.071910e-04

Joint ci ratio: 1.288754e-01	ci left: 1.940315e-04	ci right 2.209741e-04	k: 924	n:4460000
Cons ci ratio: 3.120850e-03	ci left: 2.609010e-01	ci right 2.617168e-01	k: 1165437	n:4460000
KS ci ratio: 1.288754e-01	ci left: 1.940315e-04	ci right 2.209741e-04	k: 924	n:4460000
SCN5A   4460000 perm   8671 sec   (514 perm/sec)   p_kst 2.071749e-04   p_cons 2.613087e-01   p_joint 2.071749e-04

Joint ci ratio: 1.287363e-01	ci left: 1.940305e-04	ci right 2.209416e-04	k: 926	n:4470000
Cons ci ratio: 3.117370e-03	ci left: 2.608999e-01	ci right 2.617147e-01	k: 1168043	n:4470000
KS ci ratio: 1.287363e-01	ci left: 1.940305e-04	ci right 2.209416e-04	k: 926	n:4470000
SCN5A   4470000 perm   8708 sec   (513 perm/sec)   p_kst 2.071588e-04   p_cons 2.613072e-01   p_joint 2.071588e-04

Joint ci ratio: 1.284594e-01	ci left: 1.944615e-04	ci right 2.213700e-04	k: 930	n:4480000
Cons ci ratio: 3.113894e-03	ci left: 2.608997e-01	ci right 2.617136e-01	k: 1170653	n:4480000
KS ci ratio: 1.284594e-01	ci left: 1.944615e-04	ci right 2.213700e-04	k: 930	n:4480000
SCN5A   4480000 perm   8745 sec   (512 perm/sec)   p_kst 2.075893e-04   p_cons 2.613065e-01   p_joint 2.075893e-04

Joint ci ratio: 1.283217e-01	ci left: 1.944595e-04	ci right 2.213367e-04	k: 932	n:4490000
Cons ci ratio: 3.110380e-03	ci left: 2.609057e-01	ci right 2.617187e-01	k: 1173291	n:4490000
KS ci ratio: 1.283217e-01	ci left: 1.944595e-04	ci right 2.213367e-04	k: 932	n:4490000
SCN5A   4490000 perm   8782 sec   (511 perm/sec)   p_kst 2.075724e-04   p_cons 2.613120e-01   p_joint 2.075724e-04

Joint ci ratio: 1.281844e-01	ci left: 1.944576e-04	ci right 2.213035e-04	k: 934	n:4500000
Cons ci ratio: 3.106819e-03	ci left: 2.609190e-01	ci right 2.617311e-01	k: 1175962	n:4500000
KS ci ratio: 1.281844e-01	ci left: 1.944576e-04	ci right 2.213035e-04	k: 934	n:4500000
SCN5A   4500000 perm   8819 sec   (510 perm/sec)   p_kst 2.075556e-04   p_cons 2.613249e-01   p_joint 2.075556e-04

Joint ci ratio: 1.281844e-01	ci left: 1.940264e-04	ci right 2.208128e-04	k: 934	n:4510000
Cons ci ratio: 3.103298e-03	ci left: 2.609287e-01	ci right 2.617399e-01	k: 1178617	n:4510000
KS ci ratio: 1.281844e-01	ci left: 1.940264e-04	ci right 2.208128e-04	k: 934	n:4510000
SCN5A   4510000 perm   8856 sec   (509 perm/sec)   p_kst 2.070953e-04   p_cons 2.613341e-01   p_joint 2.070953e-04

Joint ci ratio: 1.281159e-01	ci left: 1.938113e-04	ci right 2.205527e-04	k: 935	n:4520000
Cons ci ratio: 3.100048e-03	ci left: 2.609061e-01	ci right 2.617164e-01	k: 1181126	n:4520000
KS ci ratio: 1.281159e-01	ci left: 1.938113e-04	ci right 2.205527e-04	k: 935	n:4520000
SCN5A   4520000 perm   8892 sec   (508 perm/sec)   p_kst 2.068584e-04   p_cons 2.613111e-01   p_joint 2.068584e-04

Joint ci ratio: 1.280476e-01	ci left: 1.935971e-04	ci right 2.202936e-04	k: 936	n:4530000
Cons ci ratio: 3.096622e-03	ci left: 2.609069e-01	ci right 2.617163e-01	k: 1183741	n:4530000
KS ci ratio: 1.280476e-01	ci left: 1.935971e-04	ci right 2.202936e-04	k: 936	n:4530000
SCN5A   4530000 perm   8929 sec   (507 perm/sec)   p_kst 2.066225e-04   p_cons 2.613115e-01   p_joint 2.066225e-04

Joint ci ratio: 1.278431e-01	ci left: 1.938103e-04	ci right 2.204903e-04	k: 939	n:4540000
Cons ci ratio: 3.093153e-03	ci left: 2.609144e-01	ci right 2.617229e-01	k: 1186386	n:4540000
KS ci ratio: 1.278431e-01	ci left: 1.938103e-04	ci right 2.204903e-04	k: 939	n:4540000
SCN5A   4540000 perm   8966 sec   (506 perm/sec)   p_kst 2.068282e-04   p_cons 2.613185e-01   p_joint 2.068282e-04

Joint ci ratio: 1.277073e-01	ci left: 1.938099e-04	ci right 2.204593e-04	k: 941	n:4550000
Cons ci ratio: 3.089693e-03	ci left: 2.609223e-01	ci right 2.617299e-01	k: 1189033	n:4550000
KS ci ratio: 1.277073e-01	ci left: 1.938099e-04	ci right 2.204593e-04	k: 941	n:4550000
SCN5A   4550000 perm   9002 sec   (505 perm/sec)   p_kst 2.068132e-04   p_cons 2.613259e-01   p_joint 2.068132e-04

Joint ci ratio: 1.276395e-01	ci left: 1.935972e-04	ci right 2.202022e-04	k: 942	n:4560000
Cons ci ratio: 3.086060e-03	ci left: 2.609531e-01	ci right 2.617599e-01	k: 1191785	n:4560000
KS ci ratio: 1.276395e-01	ci left: 1.935972e-04	ci right 2.202022e-04	k: 942	n:4560000
SCN5A   4560000 perm   9039 sec   (504 perm/sec)   p_kst 2.065789e-04   p_cons 2.613564e-01   p_joint 2.065789e-04

Joint ci ratio: 1.275044e-01	ci left: 1.935972e-04	ci right 2.201719e-04	k: 944	n:4570000
Cons ci ratio: 3.082803e-03	ci left: 2.609384e-01	ci right 2.617442e-01	k: 1194329	n:4570000
KS ci ratio: 1.275044e-01	ci left: 1.935972e-04	ci right 2.201719e-04	k: 944	n:4570000
SCN5A   4570000 perm   9075 sec   (504 perm/sec)   p_kst 2.065646e-04   p_cons 2.613411e-01   p_joint 2.065646e-04

Joint ci ratio: 1.275044e-01	ci left: 1.931745e-04	ci right 2.196912e-04	k: 944	n:4580000
Cons ci ratio: 3.079546e-03	ci left: 2.609250e-01	ci right 2.617299e-01	k: 1196879	n:4580000
KS ci ratio: 1.275044e-01	ci left: 1.931745e-04	ci right 2.196912e-04	k: 944	n:4580000
SCN5A   4580000 perm   9112 sec   (503 perm/sec)   p_kst 2.061135e-04   p_cons 2.613273e-01   p_joint 2.061135e-04

Joint ci ratio: 1.272354e-01	ci left: 1.935973e-04	ci right 2.201118e-04	k: 948	n:4590000
Cons ci ratio: 3.076204e-03	ci left: 2.609236e-01	ci right 2.617277e-01	k: 1199484	n:4590000
KS ci ratio: 1.272354e-01	ci left: 1.935973e-04	ci right 2.201118e-04	k: 948	n:4590000
SCN5A   4590000 perm   9149 sec   (502 perm/sec)   p_kst 2.065359e-04   p_cons 2.613255e-01   p_joint 2.065359e-04

Joint ci ratio: 1.270348e-01	ci left: 1.938079e-04	ci right 2.203062e-04	k: 951	n:4600000
Cons ci ratio: 3.072907e-03	ci left: 2.609179e-01	ci right 2.617211e-01	k: 1202069	n:4600000
KS ci ratio: 1.270348e-01	ci left: 1.938079e-04	ci right 2.203062e-04	k: 951	n:4600000
SCN5A   4600000 perm   9186 sec   (501 perm/sec)   p_kst 2.067391e-04   p_cons 2.613193e-01   p_joint 2.067391e-04

Joint ci ratio: 1.268351e-01	ci left: 1.940176e-04	ci right 2.204997e-04	k: 954	n:4610000
Cons ci ratio: 3.069666e-03	ci left: 2.609066e-01	ci right 2.617089e-01	k: 1204628	n:4610000
KS ci ratio: 1.268351e-01	ci left: 1.940176e-04	ci right 2.204997e-04	k: 954	n:4610000
SCN5A   4610000 perm   9223 sec   (500 perm/sec)   p_kst 2.069414e-04   p_cons 2.613076e-01   p_joint 2.069414e-04

Joint ci ratio: 1.266363e-01	ci left: 1.942264e-04	ci right 2.206923e-04	k: 957	n:4620000
Cons ci ratio: 3.066490e-03	ci left: 2.608884e-01	ci right 2.616898e-01	k: 1207155	n:4620000
KS ci ratio: 1.266363e-01	ci left: 1.942264e-04	ci right 2.206923e-04	k: 957	n:4620000
SCN5A   4620000 perm   9260 sec   (499 perm/sec)   p_kst 2.071429e-04   p_cons 2.612890e-01   p_joint 2.071429e-04

Joint ci ratio: 1.265703e-01	ci left: 1.940161e-04	ci right 2.204385e-04	k: 958	n:4630000
Cons ci ratio: 3.063278e-03	ci left: 2.608761e-01	ci right 2.616767e-01	k: 1209709	n:4630000
KS ci ratio: 1.265703e-01	ci left: 1.940161e-04	ci right 2.204385e-04	k: 958	n:4630000
SCN5A   4630000 perm   9299 sec   (498 perm/sec)   p_kst 2.069114e-04   p_cons 2.612762e-01   p_joint 2.069114e-04

Joint ci ratio: 1.263071e-01	ci left: 1.944327e-04	ci right 2.208527e-04	k: 962	n:4640000
Cons ci ratio: 3.059941e-03	ci left: 2.608809e-01	ci right 2.616806e-01	k: 1212342	n:4640000
KS ci ratio: 1.263071e-01	ci left: 1.944327e-04	ci right 2.208527e-04	k: 962	n:4640000
SCN5A   4640000 perm   9337 sec   (497 perm/sec)   p_kst 2.073276e-04   p_cons 2.612806e-01   p_joint 2.073276e-04

Joint ci ratio: 1.260456e-01	ci left: 1.948477e-04	ci right 2.212651e-04	k: 966	n:4650000
Cons ci ratio: 3.056740e-03	ci left: 2.608698e-01	ci right 2.616686e-01	k: 1214901	n:4650000
KS ci ratio: 1.260456e-01	ci left: 1.948477e-04	ci right 2.212651e-04	k: 966	n:4650000
SCN5A   4650000 perm   9374 sec   (496 perm/sec)   p_kst 2.077419e-04   p_cons 2.612690e-01   p_joint 2.077419e-04

Joint ci ratio: 1.258505e-01	ci left: 1.950530e-04	ci right 2.214544e-04	k: 969	n:4660000
Cons ci ratio: 3.053529e-03	ci left: 2.608613e-01	ci right 2.616592e-01	k: 1217472	n:4660000
KS ci ratio: 1.258505e-01	ci left: 1.950530e-04	ci right 2.214544e-04	k: 969	n:4660000
SCN5A   4660000 perm   9413 sec   (495 perm/sec)   p_kst 2.079399e-04   p_cons 2.612601e-01   p_joint 2.079399e-04

Joint ci ratio: 1.255918e-01	ci left: 1.954650e-04	ci right 2.218636e-04	k: 973	n:4670000
Cons ci ratio: 3.050291e-03	ci left: 2.608575e-01	ci right 2.616546e-01	k: 1220065	n:4670000
KS ci ratio: 1.255918e-01	ci left: 1.954650e-04	ci right 2.218636e-04	k: 973	n:4670000
SCN5A   4670000 perm   9450 sec   (494 perm/sec)   p_kst 2.083512e-04   p_cons 2.612559e-01   p_joint 2.083512e-04

Joint ci ratio: 1.255918e-01	ci left: 1.950473e-04	ci right 2.213895e-04	k: 973	n:4680000
Cons ci ratio: 3.046995e-03	ci left: 2.608625e-01	ci right 2.616587e-01	k: 1222699	n:4680000
KS ci ratio: 1.255918e-01	ci left: 1.950473e-04	ci right 2.213895e-04	k: 973	n:4680000
SCN5A   4680000 perm   9489 sec   (493 perm/sec)   p_kst 2.079060e-04   p_cons 2.612605e-01   p_joint 2.079060e-04

Joint ci ratio: 1.253988e-01	ci left: 1.952510e-04	ci right 2.215772e-04	k: 976	n:4690000
Cons ci ratio: 3.043798e-03	ci left: 2.608562e-01	ci right 2.616516e-01	k: 1225280	n:4690000
KS ci ratio: 1.253988e-01	ci left: 1.952510e-04	ci right 2.215772e-04	k: 976	n:4690000
SCN5A   4690000 perm   9527 sec   (492 perm/sec)   p_kst 2.081023e-04   p_cons 2.612537e-01   p_joint 2.081023e-04

Joint ci ratio: 1.253347e-01	ci left: 1.950417e-04	ci right 2.213252e-04	k: 977	n:4700000
Cons ci ratio: 3.040611e-03	ci left: 2.608499e-01	ci right 2.616444e-01	k: 1227861	n:4700000
KS ci ratio: 1.253347e-01	ci left: 1.950417e-04	ci right 2.213252e-04	k: 977	n:4700000
SCN5A   4700000 perm   9565 sec   (491 perm/sec)   p_kst 2.078723e-04   p_cons 2.612470e-01   p_joint 2.078723e-04

Joint ci ratio: 1.252068e-01	ci left: 1.950389e-04	ci right 2.212932e-04	k: 979	n:4710000
Cons ci ratio: 3.037415e-03	ci left: 2.608460e-01	ci right 2.616397e-01	k: 1230453	n:4710000
KS ci ratio: 1.252068e-01	ci left: 1.950389e-04	ci right 2.212932e-04	k: 979	n:4710000
SCN5A   4710000 perm   9603 sec   (490 perm/sec)   p_kst 2.078556e-04   p_cons 2.612427e-01   p_joint 2.078556e-04

Joint ci ratio: 1.251429e-01	ci left: 1.948309e-04	ci right 2.210429e-04	k: 980	n:4720000
Cons ci ratio: 3.034077e-03	ci left: 2.608615e-01	ci right 2.616544e-01	k: 1233137	n:4720000
KS ci ratio: 1.251429e-01	ci left: 1.948309e-04	ci right 2.210429e-04	k: 980	n:4720000
SCN5A   4720000 perm   9642 sec   (490 perm/sec)   p_kst 2.076271e-04   p_cons 2.612578e-01   p_joint 2.076271e-04

Joint ci ratio: 1.248886e-01	ci left: 1.952382e-04	ci right 2.214477e-04	k: 984	n:4730000
Cons ci ratio: 3.030939e-03	ci left: 2.608530e-01	ci right 2.616450e-01	k: 1235707	n:4730000
KS ci ratio: 1.248886e-01	ci left: 1.952382e-04	ci right 2.214477e-04	k: 984	n:4730000
SCN5A   4730000 perm   9681 sec   (489 perm/sec)   p_kst 2.080338e-04   p_cons 2.612488e-01   p_joint 2.080338e-04

Joint ci ratio: 1.245728e-01	ci left: 1.958483e-04	ci right 2.220682e-04	k: 989	n:4740000
Cons ci ratio: 3.027770e-03	ci left: 2.608495e-01	ci right 2.616407e-01	k: 1238301	n:4740000
KS ci ratio: 1.245728e-01	ci left: 1.958483e-04	ci right 2.220682e-04	k: 989	n:4740000
SCN5A   4740000 perm   9718 sec   (488 perm/sec)   p_kst 2.086498e-04   p_cons 2.612449e-01   p_joint 2.086498e-04

Joint ci ratio: 1.244471e-01	ci left: 1.958439e-04	ci right 2.220349e-04	k: 991	n:4750000
Cons ci ratio: 3.024407e-03	ci left: 2.608721e-01	ci right 2.616625e-01	k: 1241019	n:4750000
KS ci ratio: 1.244471e-01	ci left: 1.958439e-04	ci right 2.220349e-04	k: 991	n:4750000
SCN5A   4750000 perm   9757 sec   (487 perm/sec)   p_kst 2.086316e-04   p_cons 2.612672e-01   p_joint 2.086316e-04

Joint ci ratio: 1.243219e-01	ci left: 1.958395e-04	ci right 2.220016e-04	k: 993	n:4760000
Cons ci ratio: 3.021163e-03	ci left: 2.608810e-01	ci right 2.616706e-01	k: 1243672	n:4760000
KS ci ratio: 1.243219e-01	ci left: 1.958395e-04	ci right 2.220016e-04	k: 993	n:4760000
SCN5A   4760000 perm   9796 sec   (486 perm/sec)   p_kst 2.086134e-04   p_cons 2.612756e-01   p_joint 2.086134e-04

Joint ci ratio: 1.241347e-01	ci left: 1.960384e-04	ci right 2.221847e-04	k: 996	n:4770000
Cons ci ratio: 3.017987e-03	ci left: 2.608823e-01	ci right 2.616710e-01	k: 1246289	n:4770000
KS ci ratio: 1.241347e-01	ci left: 1.960384e-04	ci right 2.221847e-04	k: 996	n:4770000
SCN5A   4770000 perm   9835 sec   (485 perm/sec)   p_kst 2.088050e-04   p_cons 2.612765e-01   p_joint 2.088050e-04

Joint ci ratio: 1.240725e-01	ci left: 1.958309e-04	ci right 2.219356e-04	k: 997	n:4780000
Cons ci ratio: 3.014902e-03	ci left: 2.608734e-01	ci right 2.616612e-01	k: 1248857	n:4780000
KS ci ratio: 1.240725e-01	ci left: 1.958309e-04	ci right 2.219356e-04	k: 997	n:4780000
SCN5A   4780000 perm   9874 sec   (484 perm/sec)   p_kst 2.085774e-04   p_cons 2.612672e-01   p_joint 2.085774e-04

Joint ci ratio: 1.238864e-01	ci left: 1.960290e-04	ci right 2.221180e-04	k: 1000	n:4790000
Cons ci ratio: 3.011806e-03	ci left: 2.608669e-01	ci right 2.616540e-01	k: 1251437	n:4790000
KS ci ratio: 1.238864e-01	ci left: 1.960290e-04	ci right 2.221180e-04	k: 1000	n:4790000
SCN5A   4790000 perm   9913 sec   (483 perm/sec)   p_kst 2.087683e-04   p_cons 2.612603e-01   p_joint 2.087683e-04

Joint ci ratio: 1.237012e-01	ci left: 1.962263e-04	ci right 2.222996e-04	k: 1003	n:4800000
Cons ci ratio: 3.008560e-03	ci left: 2.608812e-01	ci right 2.616674e-01	k: 1254116	n:4800000
KS ci ratio: 1.237012e-01	ci left: 1.962263e-04	ci right 2.222996e-04	k: 1003	n:4800000
SCN5A   4800000 perm   9952 sec   (482 perm/sec)   p_kst 2.089583e-04   p_cons 2.612742e-01   p_joint 2.089583e-04

Joint ci ratio: 1.235781e-01	ci left: 1.962212e-04	ci right 2.222661e-04	k: 1005	n:4810000
Cons ci ratio: 3.005513e-03	ci left: 2.608710e-01	ci right 2.616565e-01	k: 1256678	n:4810000
KS ci ratio: 1.235781e-01	ci left: 1.962212e-04	ci right 2.222661e-04	k: 1005	n:4810000
SCN5A   4810000 perm   9992 sec   (481 perm/sec)   p_kst 2.089397e-04   p_cons 2.612636e-01   p_joint 2.089397e-04

Joint ci ratio: 1.234555e-01	ci left: 1.962163e-04	ci right 2.222327e-04	k: 1007	n:4820000
Cons ci ratio: 3.002436e-03	ci left: 2.608659e-01	ci right 2.616505e-01	k: 1259264	n:4820000
KS ci ratio: 1.234555e-01	ci left: 1.962163e-04	ci right 2.222327e-04	k: 1007	n:4820000
SCN5A   4820000 perm   10031 sec   (481 perm/sec)   p_kst 2.089212e-04   p_cons 2.612581e-01   p_joint 2.089212e-04

Joint ci ratio: 1.234555e-01	ci left: 1.958100e-04	ci right 2.217726e-04	k: 1007	n:4830000
Cons ci ratio: 2.999260e-03	ci left: 2.608749e-01	ci right 2.616587e-01	k: 1261918	n:4830000
KS ci ratio: 1.234555e-01	ci left: 1.958100e-04	ci right 2.217726e-04	k: 1007	n:4830000
SCN5A   4830000 perm   10070 sec   (480 perm/sec)   p_kst 2.084886e-04   p_cons 2.612667e-01   p_joint 2.084886e-04

Joint ci ratio: 1.233332e-01	ci left: 1.958059e-04	ci right 2.217403e-04	k: 1009	n:4840000
Cons ci ratio: 2.996203e-03	ci left: 2.608698e-01	ci right 2.616528e-01	k: 1264504	n:4840000
KS ci ratio: 1.233332e-01	ci left: 1.958059e-04	ci right 2.217403e-04	k: 1009	n:4840000
SCN5A   4840000 perm   10109 sec   (479 perm/sec)   p_kst 2.084711e-04   p_cons 2.612612e-01   p_joint 2.084711e-04

Joint ci ratio: 1.232113e-01	ci left: 1.958018e-04	ci right 2.217082e-04	k: 1011	n:4850000
Cons ci ratio: 2.993115e-03	ci left: 2.608699e-01	ci right 2.616521e-01	k: 1267115	n:4850000
KS ci ratio: 1.232113e-01	ci left: 1.958018e-04	ci right 2.217082e-04	k: 1011	n:4850000
SCN5A   4850000 perm   10149 sec   (478 perm/sec)   p_kst 2.084536e-04   p_cons 2.612608e-01   p_joint 2.084536e-04

Joint ci ratio: 1.231505e-01	ci left: 1.955984e-04	ci right 2.214641e-04	k: 1012	n:4860000
Cons ci ratio: 2.990014e-03	ci left: 2.608728e-01	ci right 2.616542e-01	k: 1269740	n:4860000
KS ci ratio: 1.231505e-01	ci left: 1.955984e-04	ci right 2.214641e-04	k: 1012	n:4860000
SCN5A   4860000 perm   10188 sec   (477 perm/sec)   p_kst 2.082305e-04   p_cons 2.612634e-01   p_joint 2.082305e-04

Joint ci ratio: 1.231505e-01	ci left: 1.951967e-04	ci right 2.210094e-04	k: 1012	n:4870000
Cons ci ratio: 2.986721e-03	ci left: 2.609018e-01	ci right 2.616824e-01	k: 1272492	n:4870000
KS ci ratio: 1.231505e-01	ci left: 1.951967e-04	ci right 2.210094e-04	k: 1012	n:4870000
SCN5A   4870000 perm   10227 sec   (476 perm/sec)   p_kst 2.078029e-04   p_cons 2.612920e-01   p_joint 2.078029e-04

Joint ci ratio: 1.227271e-01	ci left: 1.961871e-04	ci right 2.220350e-04	k: 1019	n:4880000
Cons ci ratio: 2.983620e-03	ci left: 2.609074e-01	ci right 2.616872e-01	k: 1275130	n:4880000
KS ci ratio: 1.227271e-01	ci left: 1.961871e-04	ci right 2.220350e-04	k: 1019	n:4880000
SCN5A   4880000 perm   10266 sec   (475 perm/sec)   p_kst 2.088115e-04   p_cons 2.612971e-01   p_joint 2.088115e-04

Joint ci ratio: 1.226670e-01	ci left: 1.959841e-04	ci right 2.217917e-04	k: 1020	n:4890000
Cons ci ratio: 2.980572e-03	ci left: 2.609072e-01	ci right 2.616862e-01	k: 1277740	n:4890000
KS ci ratio: 1.226670e-01	ci left: 1.959841e-04	ci right 2.217917e-04	k: 1020	n:4890000
SCN5A   4890000 perm   10306 sec   (474 perm/sec)   p_kst 2.085890e-04   p_cons 2.612965e-01   p_joint 2.085890e-04

Joint ci ratio: 1.225471e-01	ci left: 1.959798e-04	ci right 2.217597e-04	k: 1022	n:4900000
Cons ci ratio: 2.977477e-03	ci left: 2.609143e-01	ci right 2.616925e-01	k: 1280386	n:4900000
KS ci ratio: 1.225471e-01	ci left: 1.959798e-04	ci right 2.217597e-04	k: 1022	n:4900000
SCN5A   4900000 perm   10346 sec   (474 perm/sec)   p_kst 2.085714e-04   p_cons 2.613033e-01   p_joint 2.085714e-04

Joint ci ratio: 1.225471e-01	ci left: 1.955806e-04	ci right 2.213081e-04	k: 1022	n:4910000
Cons ci ratio: 2.974489e-03	ci left: 2.609088e-01	ci right 2.616862e-01	k: 1282970	n:4910000
KS ci ratio: 1.225471e-01	ci left: 1.955806e-04	ci right 2.213081e-04	k: 1022	n:4910000
SCN5A   4910000 perm   10386 sec   (473 perm/sec)   p_kst 2.081466e-04   p_cons 2.612974e-01   p_joint 2.081466e-04

Joint ci ratio: 1.224872e-01	ci left: 1.953801e-04	ci right 2.210678e-04	k: 1023	n:4920000
Cons ci ratio: 2.971368e-03	ci left: 2.609218e-01	ci right 2.616984e-01	k: 1285645	n:4920000
KS ci ratio: 1.224872e-01	ci left: 1.953801e-04	ci right 2.210678e-04	k: 1023	n:4920000
SCN5A   4920000 perm   10427 sec   (472 perm/sec)   p_kst 2.079268e-04   p_cons 2.613100e-01   p_joint 2.079268e-04

Joint ci ratio: 1.223678e-01	ci left: 1.953771e-04	ci right 2.210375e-04	k: 1025	n:4930000
Cons ci ratio: 2.968428e-03	ci left: 2.609124e-01	ci right 2.616883e-01	k: 1288210	n:4930000
KS ci ratio: 1.223678e-01	ci left: 1.953771e-04	ci right 2.210375e-04	k: 1025	n:4930000
SCN5A   4930000 perm   10467 sec   (471 perm/sec)   p_kst 2.079108e-04   p_cons 2.613002e-01   p_joint 2.079108e-04

Joint ci ratio: 1.222487e-01	ci left: 1.953740e-04	ci right 2.210072e-04	k: 1027	n:4940000
Cons ci ratio: 2.965487e-03	ci left: 2.609043e-01	ci right 2.616794e-01	k: 1290781	n:4940000
KS ci ratio: 1.222487e-01	ci left: 1.953740e-04	ci right 2.210072e-04	k: 1027	n:4940000
SCN5A   4940000 perm   10506 sec   (470 perm/sec)   p_kst 2.078947e-04   p_cons 2.612917e-01   p_joint 2.078947e-04

Joint ci ratio: 1.221893e-01	ci left: 1.951752e-04	ci right 2.207690e-04	k: 1028	n:4950000
Cons ci ratio: 2.962408e-03	ci left: 2.609154e-01	ci right 2.616897e-01	k: 1293447	n:4950000
KS ci ratio: 1.221893e-01	ci left: 1.951752e-04	ci right 2.207690e-04	k: 1028	n:4950000
SCN5A   4950000 perm   10546 sec   (469 perm/sec)   p_kst 2.076768e-04   p_cons 2.613024e-01   p_joint 2.076768e-04

Joint ci ratio: 1.220707e-01	ci left: 1.951726e-04	ci right 2.207394e-04	k: 1030	n:4960000
Cons ci ratio: 2.959397e-03	ci left: 2.609188e-01	ci right 2.616923e-01	k: 1296075	n:4960000
KS ci ratio: 1.220707e-01	ci left: 1.951726e-04	ci right 2.207394e-04	k: 1030	n:4960000
SCN5A   4960000 perm   10588 sec   (468 perm/sec)   p_kst 2.076613e-04   p_cons 2.613054e-01   p_joint 2.076613e-04

Joint ci ratio: 1.218935e-01	ci left: 1.953651e-04	ci right 2.209173e-04	k: 1033	n:4970000
Cons ci ratio: 2.956357e-03	ci left: 2.609273e-01	ci right 2.617000e-01	k: 1298728	n:4970000
KS ci ratio: 1.218935e-01	ci left: 1.953651e-04	ci right 2.209173e-04	k: 1033	n:4970000
SCN5A   4970000 perm   10629 sec   (468 perm/sec)   p_kst 2.078471e-04   p_cons 2.613135e-01   p_joint 2.078471e-04

Joint ci ratio: 1.217758e-01	ci left: 1.953622e-04	ci right 2.208875e-04	k: 1035	n:4980000
Cons ci ratio: 2.953376e-03	ci left: 2.609290e-01	ci right 2.617010e-01	k: 1301348	n:4980000
KS ci ratio: 1.217758e-01	ci left: 1.953622e-04	ci right 2.208875e-04	k: 1035	n:4980000
SCN5A   4980000 perm   10668 sec   (467 perm/sec)   p_kst 2.078313e-04   p_cons 2.613149e-01   p_joint 2.078313e-04

Joint ci ratio: 1.216584e-01	ci left: 1.953593e-04	ci right 2.208579e-04	k: 1037	n:4990000
Cons ci ratio: 2.950371e-03	ci left: 2.609352e-01	ci right 2.617064e-01	k: 1303990	n:4990000
KS ci ratio: 1.216584e-01	ci left: 1.953593e-04	ci right 2.208579e-04	k: 1037	n:4990000
SCN5A   4990000 perm   10707 sec   (466 perm/sec)   p_kst 2.078156e-04   p_cons 2.613206e-01   p_joint 2.078156e-04

Joint ci ratio: 1.215414e-01	ci left: 1.953564e-04	ci right 2.208283e-04	k: 1039	n:5000000
Cons ci ratio: 2.947455e-03	ci left: 2.609309e-01	ci right 2.617013e-01	k: 1306580	n:5000000
KS ci ratio: 1.215414e-01	ci left: 1.953564e-04	ci right 2.208283e-04	k: 1039	n:5000000
SCN5A   5000000 perm   10746 sec   (465 perm/sec)   p_kst 2.078000e-04   p_cons 2.613160e-01   p_joint 2.078000e-04

Outputting figure to mutsig2_images.part000000000153/SCN5A.2_6255_5000000_0.0002078_0.26132_0.0002078.png
                gene_name: SCN5A
               theta_stop: 0.12 
                    nperm: 5000000 
                     p_ks: 0.00021 
        ci_ks_bounds_left: 0.00020 
       ci_ks_bounds_right: 0.00022 
                   p_cons: 0.26 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.26 
                  p_joint: 0.00021 
     ci_joint_bounds_left: 0.00020 
    ci_joint_bounds_right: 0.00022 

Current progress: 50 percent done.
SCN9A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.868830e-03	ci left: 9.823135e-01	ci right 9.871982e-01	k: 9849	n:10000
KS ci ratio: 1.095686e-02	ci left: 9.223452e-01	ci right 9.326041e-01	k: 9276	n:10000
SCN9A   10000 perm   2 sec   (4942 perm/sec)   p_kst 9.276000e-01   p_cons 9.849000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000153/SCN9A.2_6038_10000_0.9276_0.9849_1.png
                gene_name: SCN9A
               theta_stop: 0.011 
                    nperm: 10000 
                     p_ks: 0.93 
        ci_ks_bounds_left: 0.92 
       ci_ks_bounds_right: 0.93 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.99 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000153
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 153 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1705>
Subject: Job 8704343: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1705>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000154> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 19:38:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000154.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000154.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 154  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000154.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    141.61 sec.
    Max Memory :      5511 MB
    Max Swap   :      8287 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
154
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 154
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 154: processing genes 13842 - 13932
Calculating significance of each gene.
Using projection method.
13842	SDR9C7	1
13843	SDS	1
13844	SDSL	1
13845	SEBOX	1
13846	SEC11A	1
13847	SEC11C	1
13848	SEC13	1
13849	SEC14L1	1
13850	SEC14L2	1
13851	SEC14L3	1
13852	SEC14L4	1
13853	SEC14L5	1
13854	SEC16A	5.241193e-01
13855	SEC16B	1
13856	SEC22A	1
13857	SEC22B	1
13858	SEC22C	1
13859	SEC23A	1
13860	SEC23B	1
13861	SEC23IP	1
13862	SEC24A	1
13863	SEC24B	2.075827e-01
13864	SEC24C	1
13865	SEC24D	2.210622e-01
13866	SEC31A	1
13867	SEC31B	1
13868	SEC61A1	1
13869	SEC61A2	1
13870	SEC61B	1
13871	SEC61G	1
13872	SEC62	1.019650e-01
13873	SEC63	7.957831e-02
13874	SECISBP2	1
13875	SECISBP2L	3.447126e-01
13876	SECTM1	1
13877	SEH1L	1
13878	SEL1L	1
13879	SEL1L2	5.105395e-02
13880	SEL1L3	1.463810e-01
13881	SELE	1
13882	SELENBP1	1
13883	SELK	1
13884	SELL	1
13885	SELM	1
13886	SELO	1
13887	SELP	1
13888	SELPLG	1
13889	SELS	1
13890	SELT	1
13891	SELV	1
13892	SEMA3A	3.221502e-01
13893	SEMA3B	5.407792e-02
13894	SEMA3C	1
13895	SEMA3D	1
13896	SEMA3E	1
13897	SEMA3F	1
13898	SEMA3G	1
13899	SEMA4A	1
13900	SEMA4B	1
13901	SEMA4C	1
13902	SEMA4D	1
13903	SEMA4F	1
13904	SEMA4G	1
13905	SEMA5A	1
13906	SEMA5B	1
13907	SEMA6A	2.276374e-01
13908	SEMA6B	1.564586e-01
13909	SEMA6C	2.908421e-01
13910	SEMA6D	1
In gene SEMA7A the following bins exceed PROBCAP:
    THCA-FE-A234-TP	categ 5	N = 1874    n = 1	mu =   2.44e-07
13911	SEMA7A	3.306954e-03
13912	SEMG1	1
13913	SEMG2	1
13914	SENP1	1
13915	SENP2	1
13916	SENP3	1
13917	SENP5	6.555055e-02
13918	SENP6	2.575102e-01
13919	SENP7	2.354127e-01
13920	SENP8	1
13921	SEP15	1
13922	SEPHS1	1
13923	SEPHS2	1
13924	SEPN1	1
13925	SEPP1	1
13926	SEPSECS	1
13927	SEPT1	1
13928	SEPT10	1
13929	SEPT11	1
13930	SEPT12	1
13931	SEPT14	1
13932	SEPT2	1
Done

Running MutSig 2:
Scatter job 154: processing genes 13842 - 13932
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SEMA7A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.638588e-03	ci left: 9.596369e-01	ci right 9.670900e-01	k: 9635	n:10000
KS ci ratio: 1.374944e-02	ci left: 8.842156e-01	ci right 8.965559e-01	k: 8905	n:10000
SEMA7A   10000 perm   2 sec   (5842 perm/sec)   p_kst 8.905000e-01   p_cons 9.635000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000154/SEMA7A.3_2057_10000_0.8905_0.9635_1.png
                gene_name: SEMA7A
               theta_stop: 0.014 
                    nperm: 10000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.96 
      ci_cons_bounds_left: 0.96 
     ci_cons_bounds_right: 0.97 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000154
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 154 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1707>
Subject: Job 8704344: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1707>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000155> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 22:32:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000155.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000155.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 155  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000155.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10711.44 sec.
    Max Memory :      6181 MB
    Max Swap   :      8565 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
155
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 155
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 155: processing genes 13933 - 14022
Calculating significance of each gene.
Using projection method.
13933	SEPT3	1
13934	SEPT4	1
13935	SEPT5	1
13936	SEPT6	1.950076e-01
13937	SEPT7	1
13938	SEPT8	1
13939	SEPT9	1
13940	SEPW1	1
13941	SEPX1	1
13942	SERAC1	1
13943	SERBP1	1
13944	SERF2	1
13945	SERGEF	1
13946	SERHL2	1
13947	SERINC1	1
13948	SERINC2	1
13949	SERINC3	1
13950	SERINC4	1
13951	SERINC5	1
13952	SERP1	1
13953	SERP2	1
13954	SERPINA1	1.691636e-01
13955	SERPINA10	1
13956	SERPINA11	1
13957	SERPINA12	1.387029e-01
13958	SERPINA3	1
13959	SERPINA4	1
13960	SERPINA5	1
13961	SERPINA6	1
13962	SERPINA7	1
13963	SERPINA9	1
13964	SERPINB1	1
13965	SERPINB10	1
13966	SERPINB11	1
13967	SERPINB12	1
13968	SERPINB13	1
13969	SERPINB2	1
13970	SERPINB3	1
13971	SERPINB4	3.869605e-03
13972	SERPINB5	1
13973	SERPINB6	1
13974	SERPINB7	1
13975	SERPINB8	1
13976	SERPINB9	1
13977	SERPINC1	1
13978	SERPIND1	1
13979	SERPINE1	1
13980	SERPINE2	1
13981	SERPINE3	1.159911e-02
13982	SERPINF1	1
13983	SERPINF2	1
13984	SERPING1	1
13985	SERPINH1	1.537210e-01
13986	SERPINI1	1
13987	SERPINI2	1
13988	SERTAD1	1
13989	SERTAD2	1
13990	SERTAD3	3.246142e-02
13991	SERTAD4	1
13992	SESN1	1
13993	SESN2	1
13994	SESN3	1.205236e-01
13995	SESTD1	1
13996	SET	1
13997	SETBP1	5.103986e-01
In gene SETD1A the following bins exceed PROBCAP:
    THCA-DJ-A2PR-TP	categ 6	N = 4613    n = 1	mu =   1.72e-07
13998	SETD1A	3.980858e-01
13999	SETD2	6.052690e-01
14000/18093 14000	SETD3	1
14001	SETD4	1
14002	SETD5	1.108273e-01
14003	SETD6	1
14004	SETD7	1
14005	SETD8	1
14006	SETDB1	4.217253e-01
14007	SETDB2	1
14008	SETMAR	1
14009	SETX	1.973457e-01
14010	SEZ6	1
14011	SEZ6L	3.632004e-02
14012	SEZ6L2	1
14013	SF1	1
14014	SF3A1	1.006441e-01
14015	SF3A2	1
In gene SF3A3 the following bins exceed PROBCAP:
    THCA-ET-A3BN-TP	categ 6	N = 1462    n = 1	mu =   6.96e-08
14016	SF3A3	5.488232e-02
14017	SF3B1	1
14018	SF3B14	1
In gene SF3B2 the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 2771    n = 1	mu =   2.03e-07
14019	SF3B2	5.974455e-02
14020	SF3B3	1
14021	SF3B4	1
14022	SF3B5	1
Done

Running MutSig 2:
Scatter job 155: processing genes 13933 - 14022
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SERPINB4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.169352e-02	ci left: 3.555546e-01	ci right 3.745241e-01	k: 3650	n:10000
KS ci ratio: 1.221246e-01	ci left: 8.766844e-02	ci right 9.916968e-02	k: 933	n:10000
SERPINB4   10000 perm   2 sec   (5859 perm/sec)   p_kst 9.330000e-02   p_cons 3.650000e-01   p_joint 1

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 3.668711e-02	ci left: 3.566796e-01	ci right 3.700602e-01	k: 7267	n:20000
KS ci ratio: 8.617888e-02	ci left: 8.969559e-02	ci right 9.782296e-02	k: 1874	n:20000
SERPINB4   20000 perm   6 sec   (3358 perm/sec)   p_kst 9.370000e-02   p_cons 3.633500e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000155/SERPINB4.2_1201_20000_0.0937_0.36335_1.png
                gene_name: SERPINB4
               theta_stop: 0.086 
                    nperm: 20000 
                     p_ks: 0.094 
        ci_ks_bounds_left: 0.090 
       ci_ks_bounds_right: 0.098 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.37 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 17 percent done.
SERPINE3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.762664e-02	ci left: 5.105536e-01	ci right 5.302345e-01	k: 5204	n:10000
Cons ci ratio: 4.788103e-02	ci left: 3.915733e-01	ci right 4.108842e-01	k: 4012	n:10000
KS ci ratio: 6.767870e-02	ci left: 2.426241e-01	ci right 2.597210e-01	k: 2511	n:10000
SERPINE3   10000 perm   2 sec   (6437 perm/sec)   p_kst 2.511000e-01   p_cons 4.012000e-01   p_joint 5.204000e-01

Outputting figure to mutsig2_images.part000000000155/SERPINE3.2_1303_10000_0.2511_0.4012_0.5204.png
                gene_name: SERPINE3
               theta_stop: 0.068 
                    nperm: 10000 
                     p_ks: 0.25 
        ci_ks_bounds_left: 0.24 
       ci_ks_bounds_right: 0.26 
                   p_cons: 0.40 
      ci_cons_bounds_left: 0.39 
     ci_cons_bounds_right: 0.41 
                  p_joint: 0.52 
     ci_joint_bounds_left: 0.51 
    ci_joint_bounds_right: 0.53 

Current progress: 33 percent done.
SETD5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.949659e-02	ci left: 7.937479e-01	ci right 8.094760e-01	k: 8017	n:10000
Cons ci ratio: 5.428899e-02	ci left: 3.332954e-01	ci right 3.519964e-01	k: 3426	n:10000
KS ci ratio: 3.531729e-02	ci left: 5.420892e-01	ci right 5.616806e-01	k: 5519	n:10000
SETD5   10000 perm   2 sec   (5105 perm/sec)   p_kst 5.519000e-01   p_cons 3.426000e-01   p_joint 8.017000e-01

Outputting figure to mutsig2_images.part000000000155/SETD5.2_4413_10000_0.5519_0.3426_0.8017.png
                gene_name: SETD5
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.55 
        ci_ks_bounds_left: 0.54 
       ci_ks_bounds_right: 0.56 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.35 
                  p_joint: 0.80 
     ci_joint_bounds_left: 0.79 
    ci_joint_bounds_right: 0.81 

Current progress: 50 percent done.
SETX
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.772199e-02	ci left: 3.931666e-01	ci right 4.124900e-01	k: 4028	n:10000
Cons ci ratio: 5.015712e-02	ci left: 3.695773e-01	ci right 3.886931e-01	k: 3791	n:10000
KS ci ratio: 4.553173e-02	ci left: 4.158821e-01	ci right 4.353612e-01	k: 4256	n:10000
SETX   10000 perm   2 sec   (4098 perm/sec)   p_kst 4.256000e-01   p_cons 3.791000e-01   p_joint 4.028000e-01

Outputting figure to mutsig2_images.part000000000155/SETX.2_8130_10000_0.4256_0.3791_0.4028.png
                gene_name: SETX
               theta_stop: 0.050 
                    nperm: 10000 
                     p_ks: 0.43 
        ci_ks_bounds_left: 0.42 
       ci_ks_bounds_right: 0.44 
                   p_cons: 0.38 
      ci_cons_bounds_left: 0.37 
     ci_cons_bounds_right: 0.39 
                  p_joint: 0.40 
     ci_joint_bounds_left: 0.39 
    ci_joint_bounds_right: 0.41 

Current progress: 67 percent done.
SEZ6L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.877649e-02	ci left: 8.056233e-01	ci right 8.209937e-01	k: 8134	n:10000
Cons ci ratio: 5.747302e-02	ci left: 3.082813e-01	ci right 3.266251e-01	k: 3174	n:10000
KS ci ratio: 3.236439e-02	ci left: 5.849008e-01	ci right 6.042441e-01	k: 5946	n:10000
SEZ6L   10000 perm   2 sec   (5422 perm/sec)   p_kst 5.946000e-01   p_cons 3.174000e-01   p_joint 8.134000e-01

Outputting figure to mutsig2_images.part000000000155/SEZ6L.2_3143_10000_0.5946_0.3174_0.8134.png
                gene_name: SEZ6L
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.81 
     ci_joint_bounds_left: 0.81 
    ci_joint_bounds_right: 0.82 

Current progress: 83 percent done.
SF3B2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 5.369981e-01	ci left: 3.885975e-03	ci right 6.813584e-03	k: 52	n:10000
KS ci ratio: 1.385306e+00	ci left: 2.814811e-04	ci right 1.441732e-03	k: 7	n:10000
SF3B2   10000 perm   2 sec   (6081 perm/sec)   p_kst 7.000000e-04   p_cons 5.200000e-03   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 3.949987e-01	ci left: 3.934731e-03	ci right 5.913431e-03	k: 97	n:20000
KS ci ratio: 1.306340e+00	ci left: 1.727069e-04	ci right 7.880065e-04	k: 8	n:20000
SF3B2   20000 perm   4 sec   (5406 perm/sec)   p_kst 4.000000e-04   p_cons 4.850000e-03   p_joint 0

Joint ci ratio: 8.170495e-01	ci left: 4.596314e-04	ci right 1.110066e-03	k: 22	n:30000
Cons ci ratio: 3.258763e-01	ci left: 4.018883e-03	ci right 5.612681e-03	k: 143	n:30000
KS ci ratio: 1.086959e+00	ci left: 2.067024e-04	ci right 6.986151e-04	k: 12	n:30000
SF3B2   30000 perm   6 sec   (5155 perm/sec)   p_kst 4.000000e-04   p_cons 4.766667e-03   p_joint 7.333333e-04

Joint ci ratio: 1.385773e+00	ci left: 7.036188e-05	ci right 3.605334e-04	k: 7	n:40000
Cons ci ratio: 2.852192e-01	ci left: 4.030184e-03	ci right 5.393254e-03	k: 187	n:40000
KS ci ratio: 8.551789e-01	ci left: 3.054389e-04	ci right 7.721043e-04	k: 20	n:40000
SF3B2   40000 perm   8 sec   (4981 perm/sec)   p_kst 5.000000e-04   p_cons 4.675000e-03   p_joint 1.750000e-04

Joint ci ratio: 1.181783e+00	ci left: 9.591181e-05	ci right 3.677763e-04	k: 10	n:50000
Cons ci ratio: 2.493120e-01	ci left: 4.306830e-03	ci right 5.551719e-03	k: 245	n:50000
KS ci ratio: 7.837961e-01	ci left: 3.075685e-04	ci right 7.141183e-04	k: 24	n:50000
SF3B2   50000 perm   10 sec   (4857 perm/sec)   p_kst 4.800000e-04   p_cons 4.900000e-03   p_joint 2.000000e-04

Joint ci ratio: 1.131484e+00	ci left: 9.152278e-05	ci right 3.280102e-04	k: 11	n:60000
Cons ci ratio: 2.272808e-01	ci left: 4.372714e-03	ci right 5.509318e-03	k: 295	n:60000
KS ci ratio: 7.406313e-01	ci left: 2.965731e-04	ci right 6.546594e-04	k: 27	n:60000
SF3B2   60000 perm   13 sec   (4749 perm/sec)   p_kst 4.500000e-04   p_cons 4.916667e-03   p_joint 1.833333e-04

Joint ci ratio: 1.239515e+00	ci left: 5.879268e-05	ci right 2.440545e-04	k: 9	n:70000
Cons ci ratio: 2.102175e-01	ci left: 4.423254e-03	ci right 5.475570e-03	k: 345	n:70000
KS ci ratio: 6.822187e-01	ci left: 3.127057e-04	ci right 6.452886e-04	k: 32	n:70000
SF3B2   70000 perm   15 sec   (4649 perm/sec)   p_kst 4.571429e-04   p_cons 4.928571e-03   p_joint 1.285714e-04

Joint ci ratio: 1.239528e+00	ci left: 5.144341e-05	ci right 2.135493e-04	k: 9	n:80000
Cons ci ratio: 1.955082e-01	ci left: 4.511117e-03	ci right 5.500305e-03	k: 399	n:80000
KS ci ratio: 6.275454e-01	ci left: 3.361595e-04	ci right 6.519169e-04	k: 38	n:80000
SF3B2   80000 perm   18 sec   (4558 perm/sec)   p_kst 4.750000e-04   p_cons 4.987500e-03   p_joint 1.125000e-04

Joint ci ratio: 1.239537e+00	ci left: 4.572735e-05	ci right 1.898226e-04	k: 9	n:90000
Cons ci ratio: 1.866335e-01	ci left: 4.422474e-03	ci right 5.343217e-03	k: 438	n:90000
KS ci ratio: 5.976483e-01	ci left: 3.363523e-04	ci right 6.307460e-04	k: 42	n:90000
SF3B2   90000 perm   20 sec   (4471 perm/sec)   p_kst 4.666667e-04   p_cons 4.866667e-03   p_joint 1.000000e-04

Joint ci ratio: 1.481561e+00	ci left: 2.201925e-05	ci right 1.305901e-04	k: 6	n:100000
Cons ci ratio: 1.783054e-01	ci left: 4.381041e-03	ci right 5.248065e-03	k: 480	n:100000
KS ci ratio: 5.908293e-01	ci left: 3.112101e-04	ci right 5.791640e-04	k: 43	n:100000
SF3B2   100000 perm   23 sec   (4372 perm/sec)   p_kst 4.300000e-04   p_cons 4.800000e-03   p_joint 6.000000e-05

Joint ci ratio: 1.385873e+00	ci left: 2.558549e-05	ci right 1.311108e-04	k: 7	n:110000
Cons ci ratio: 1.701854e-01	ci left: 4.391411e-03	ci right 5.216849e-03	k: 527	n:110000
KS ci ratio: 5.656772e-01	ci left: 3.139603e-04	ci right 5.681421e-04	k: 47	n:110000
SF3B2   110000 perm   26 sec   (4294 perm/sec)   p_kst 4.272727e-04   p_cons 4.790909e-03   p_joint 6.363636e-05

Joint ci ratio: 1.306612e+00	ci left: 2.878236e-05	ci right 1.313557e-04	k: 8	n:120000
Cons ci ratio: 1.612609e-01	ci left: 4.504755e-03	ci right 5.302794e-03	k: 587	n:120000
KS ci ratio: 5.434861e-01	ci left: 3.164563e-04	ci right 5.587591e-04	k: 51	n:120000
SF3B2   120000 perm   28 sec   (4219 perm/sec)   p_kst 4.250000e-04   p_cons 4.891667e-03   p_joint 6.666667e-05

Joint ci ratio: 1.239560e+00	ci left: 3.165719e-05	ci right 1.314175e-04	k: 9	n:130000
Cons ci ratio: 1.550568e-01	ci left: 4.512858e-03	ci right 5.278715e-03	k: 635	n:130000
KS ci ratio: 5.237172e-01	ci left: 3.187348e-04	ci right 5.506576e-04	k: 55	n:130000
SF3B2   130000 perm   31 sec   (4147 perm/sec)   p_kst 4.230769e-04   p_cons 4.884615e-03   p_joint 6.923077e-05

Joint ci ratio: 1.600293e+00	ci left: 1.159643e-05	ci right 8.334324e-05	k: 5	n:140000
Cons ci ratio: 1.498484e-01	ci left: 4.499677e-03	ci right 5.235346e-03	k: 680	n:140000
KS ci ratio: 5.059596e-01	ci left: 3.208260e-04	ci right 5.435789e-04	k: 59	n:140000
SF3B2   140000 perm   34 sec   (4077 perm/sec)   p_kst 4.214286e-04   p_cons 4.857143e-03   p_joint 3.571429e-05

Joint ci ratio: 1.600296e+00	ci left: 1.082333e-05	ci right 7.778715e-05	k: 5	n:150000
Cons ci ratio: 1.454341e-01	ci left: 4.469350e-03	ci right 5.176666e-03	k: 722	n:150000
KS ci ratio: 4.898938e-01	ci left: 3.227542e-04	ci right 5.373309e-04	k: 63	n:150000
SF3B2   150000 perm   37 sec   (4010 perm/sec)   p_kst 4.200000e-04   p_cons 4.813333e-03   p_joint 3.333333e-05

Joint ci ratio: 1.087165e+00	ci left: 3.875418e-05	ci right 1.310062e-04	k: 12	n:160000
Cons ci ratio: 1.405598e-01	ci left: 4.497368e-03	ci right 5.183264e-03	k: 773	n:160000
KS ci ratio: 4.618710e-01	ci left: 3.465882e-04	ci right 5.596978e-04	k: 71	n:160000
SF3B2   160000 perm   41 sec   (3946 perm/sec)   p_kst 4.437500e-04   p_cons 4.831250e-03   p_joint 7.500000e-05

Joint ci ratio: 1.047618e+00	ci left: 4.071798e-05	ci right 1.307635e-04	k: 13	n:170000
Cons ci ratio: 1.369817e-01	ci left: 4.465615e-03	ci right 5.127917e-03	k: 814	n:170000
KS ci ratio: 4.525414e-01	ci left: 3.418145e-04	ci right 5.464415e-04	k: 74	n:170000
SF3B2   170000 perm   44 sec   (3885 perm/sec)   p_kst 4.352941e-04   p_cons 4.788235e-03   p_joint 7.647059e-05

Joint ci ratio: 1.012095e+00	ci left: 4.252247e-05	ci right 1.304945e-04	k: 14	n:180000
Cons ci ratio: 1.333508e-01	ci left: 4.459071e-03	ci right 5.101483e-03	k: 859	n:180000
KS ci ratio: 4.354563e-01	ci left: 3.524320e-04	ci right 5.531195e-04	k: 80	n:180000
SF3B2   180000 perm   47 sec   (3825 perm/sec)   p_kst 4.444444e-04   p_cons 4.772222e-03   p_joint 7.777778e-05

Joint ci ratio: 9.506946e-01	ci left: 4.813433e-05	ci right 1.367490e-04	k: 16	n:190000
Cons ci ratio: 1.296348e-01	ci left: 4.478888e-03	ci right 5.104789e-03	k: 909	n:190000
KS ci ratio: 4.201708e-01	ci left: 3.620623e-04	ci right 5.589666e-04	k: 86	n:190000
SF3B2   190000 perm   50 sec   (3769 perm/sec)   p_kst 4.526316e-04   p_cons 4.784211e-03   p_joint 8.421053e-05

Joint ci ratio: 9.239090e-01	ci left: 4.951639e-05	ci right 1.360898e-04	k: 17	n:200000
Cons ci ratio: 1.264782e-01	ci left: 4.477576e-03	ci right 5.086914e-03	k: 955	n:200000
KS ci ratio: 4.085932e-01	ci left: 3.663529e-04	ci right 5.586102e-04	k: 91	n:200000
SF3B2   200000 perm   54 sec   (3713 perm/sec)   p_kst 4.550000e-04   p_cons 4.775000e-03   p_joint 8.500000e-05

Joint ci ratio: 1.181891e+00	ci left: 2.283541e-05	ci right 8.757137e-05	k: 10	n:210000
Cons ci ratio: 1.234177e-01	ci left: 4.485786e-03	ci right 5.080391e-03	k: 1003	n:210000
KS ci ratio: 3.958864e-01	ci left: 3.745891e-04	ci right 5.634560e-04	k: 97	n:210000
SF3B2   210000 perm   57 sec   (3660 perm/sec)   p_kst 4.619048e-04   p_cons 4.776190e-03   p_joint 4.761905e-05

Joint ci ratio: 1.131573e+00	ci left: 2.496008e-05	ci right 8.946205e-05	k: 11	n:220000
Cons ci ratio: 1.199407e-01	ci left: 4.541914e-03	ci right 5.125795e-03	k: 1062	n:220000
KS ci ratio: 3.919100e-01	ci left: 3.657524e-04	ci right 5.478320e-04	k: 99	n:220000
SF3B2   220000 perm   61 sec   (3609 perm/sec)   p_kst 4.500000e-04   p_cons 4.827273e-03   p_joint 5.000000e-05

Joint ci ratio: 1.131575e+00	ci left: 2.387484e-05	ci right 8.557247e-05	k: 11	n:230000
Cons ci ratio: 1.173212e-01	ci left: 4.546943e-03	ci right 5.117819e-03	k: 1110	n:230000
KS ci ratio: 3.842999e-01	ci left: 3.655444e-04	ci right 5.430935e-04	k: 103	n:230000
SF3B2   230000 perm   65 sec   (3558 perm/sec)   p_kst 4.478261e-04   p_cons 4.826087e-03   p_joint 4.782609e-05

Joint ci ratio: 1.087181e+00	ci left: 2.583599e-05	ci right 8.733831e-05	k: 12	n:240000
Cons ci ratio: 1.147171e-01	ci left: 4.563823e-03	ci right 5.123238e-03	k: 1161	n:240000
KS ci ratio: 3.806592e-01	ci left: 3.578452e-04	ci right 5.295960e-04	k: 105	n:240000
SF3B2   240000 perm   68 sec   (3509 perm/sec)   p_kst 4.375000e-04   p_cons 4.837500e-03   p_joint 5.000000e-05

Joint ci ratio: 1.087182e+00	ci left: 2.480254e-05	ci right 8.384484e-05	k: 12	n:250000
Cons ci ratio: 1.127470e-01	ci left: 4.540601e-03	ci right 5.086976e-03	k: 1202	n:250000
KS ci ratio: 3.788788e-01	ci left: 3.471491e-04	ci right 5.127930e-04	k: 106	n:250000
SF3B2   250000 perm   72 sec   (3462 perm/sec)   p_kst 4.240000e-04   p_cons 4.808000e-03   p_joint 4.800000e-05

Joint ci ratio: 1.087183e+00	ci left: 2.384859e-05	ci right 8.062009e-05	k: 12	n:260000
Cons ci ratio: 1.106073e-01	ci left: 4.541683e-03	ci right 5.077140e-03	k: 1249	n:260000
KS ci ratio: 3.719898e-01	ci left: 3.477302e-04	ci right 5.099000e-04	k: 110	n:260000
SF3B2   260000 perm   76 sec   (3417 perm/sec)   p_kst 4.230769e-04   p_cons 4.803846e-03   p_joint 4.615385e-05

Joint ci ratio: 1.047635e+00	ci left: 2.563710e-05	ci right 8.233339e-05	k: 13	n:270000
Cons ci ratio: 1.084590e-01	ci left: 4.553586e-03	ci right 5.079353e-03	k: 1299	n:270000
KS ci ratio: 3.670634e-01	ci left: 3.449306e-04	ci right 5.031534e-04	k: 113	n:270000
SF3B2   270000 perm   80 sec   (3373 perm/sec)   p_kst 4.185185e-04   p_cons 4.811111e-03   p_joint 4.814815e-05

Joint ci ratio: 1.012111e+00	ci left: 2.733573e-05	ci right 8.389008e-05	k: 14	n:280000
Cons ci ratio: 1.060765e-01	ci left: 4.596024e-03	ci right 5.114306e-03	k: 1358	n:280000
KS ci ratio: 3.654662e-01	ci left: 3.358540e-04	ci right 4.890829e-04	k: 114	n:280000
SF3B2   280000 perm   84 sec   (3328 perm/sec)   p_kst 4.071429e-04   p_cons 4.850000e-03   p_joint 5.000000e-05

Joint ci ratio: 8.357137e-01	ci left: 4.482582e-05	ci right 1.106901e-04	k: 21	n:290000
Cons ci ratio: 1.045506e-01	ci left: 4.571835e-03	ci right 5.079518e-03	k: 1398	n:290000
KS ci ratio: 3.562887e-01	ci left: 3.430871e-04	ci right 4.947751e-04	k: 120	n:290000
SF3B2   290000 perm   88 sec   (3286 perm/sec)   p_kst 4.137931e-04   p_cons 4.820690e-03   p_joint 7.241379e-05

Joint ci ratio: 8.357148e-01	ci left: 4.333161e-05	ci right 1.070005e-04	k: 21	n:300000
Cons ci ratio: 1.029808e-01	ci left: 4.559053e-03	ci right 5.057254e-03	k: 1441	n:300000
KS ci ratio: 3.505418e-01	ci left: 3.438007e-04	ci right 4.927948e-04	k: 124	n:300000
SF3B2   300000 perm   92 sec   (3245 perm/sec)   p_kst 4.133333e-04   p_cons 4.803333e-03   p_joint 7.000000e-05

Joint ci ratio: 8.357158e-01	ci left: 4.193380e-05	ci right 1.035489e-04	k: 21	n:310000
Cons ci ratio: 1.013769e-01	ci left: 4.556581e-03	ci right 5.046295e-03	k: 1487	n:310000
KS ci ratio: 3.437341e-01	ci left: 3.474334e-04	ci right 4.944277e-04	k: 129	n:310000
SF3B2   310000 perm   97 sec   (3205 perm/sec)   p_kst 4.161290e-04   p_cons 4.796774e-03   p_joint 6.774194e-05

Joint ci ratio: 8.173459e-01	ci left: 4.308574e-05	ci right 1.040865e-04	k: 22	n:320000
Cons ci ratio: 9.981299e-02	ci left: 4.557368e-03	ci right 5.039168e-03	k: 1534	n:320000
KS ci ratio: 3.385650e-01	ci left: 3.480054e-04	ci right 4.925437e-04	k: 133	n:320000
SF3B2   320000 perm   101 sec   (3165 perm/sec)   p_kst 4.156250e-04   p_cons 4.793750e-03   p_joint 6.875000e-05

Joint ci ratio: 8.001363e-01	ci left: 4.418240e-05	ci right 1.045779e-04	k: 23	n:330000
Cons ci ratio: 9.835052e-02	ci left: 4.555205e-03	ci right 5.029313e-03	k: 1580	n:330000
KS ci ratio: 3.348382e-01	ci left: 3.457820e-04	ci right 4.874749e-04	k: 136	n:330000
SF3B2   330000 perm   105 sec   (3128 perm/sec)   p_kst 4.121212e-04   p_cons 4.787879e-03   p_joint 6.969697e-05

Joint ci ratio: 7.839700e-01	ci left: 4.522772e-05	ci right 1.050279e-04	k: 24	n:340000
Cons ci ratio: 9.707047e-02	ci left: 4.541737e-03	ci right 5.007941e-03	k: 1622	n:340000
KS ci ratio: 3.324216e-01	ci left: 3.410015e-04	ci right 4.795110e-04	k: 138	n:340000
SF3B2   340000 perm   110 sec   (3092 perm/sec)   p_kst 4.058824e-04   p_cons 4.770588e-03   p_joint 7.058824e-05

Joint ci ratio: 7.839709e-01	ci left: 4.393549e-05	ci right 1.020271e-04	k: 24	n:350000
Cons ci ratio: 9.575249e-02	ci left: 4.537444e-03	ci right 4.996529e-03	k: 1667	n:350000
KS ci ratio: 3.254704e-01	ci left: 3.469862e-04	ci right 4.843638e-04	k: 144	n:350000
SF3B2   350000 perm   115 sec   (3057 perm/sec)   p_kst 4.114286e-04   p_cons 4.762857e-03   p_joint 6.857143e-05

Joint ci ratio: 8.765131e-01	ci left: 3.177596e-05	ci right 8.241782e-05	k: 19	n:360000
Cons ci ratio: 9.423836e-02	ci left: 4.557843e-03	ci right 5.011296e-03	k: 1721	n:360000
KS ci ratio: 3.147938e-01	ci left: 3.628947e-04	ci right 5.009102e-04	k: 154	n:360000
SF3B2   360000 perm   119 sec   (3021 perm/sec)   p_kst 4.277778e-04   p_cons 4.780556e-03   p_joint 5.277778e-05

Joint ci ratio: 8.765138e-01	ci left: 3.091714e-05	ci right 8.019034e-05	k: 19	n:370000
Cons ci ratio: 9.292538e-02	ci left: 4.563991e-03	ci right 5.011386e-03	k: 1770	n:370000
KS ci ratio: 3.098358e-01	ci left: 3.655413e-04	ci right 5.019412e-04	k: 159	n:370000
SF3B2   370000 perm   124 sec   (2987 perm/sec)   p_kst 4.297297e-04   p_cons 4.783784e-03   p_joint 5.135135e-05

Joint ci ratio: 8.553894e-01	ci left: 3.214902e-05	ci right 8.128404e-05	k: 20	n:380000
Cons ci ratio: 9.186889e-02	ci left: 4.549286e-03	ci right 4.989897e-03	k: 1811	n:380000
KS ci ratio: 3.079182e-01	ci left: 3.607770e-04	ci right 4.944023e-04	k: 161	n:380000
SF3B2   380000 perm   129 sec   (2954 perm/sec)   p_kst 4.236842e-04   p_cons 4.765789e-03   p_joint 5.263158e-05

Joint ci ratio: 8.553900e-01	ci left: 3.132468e-05	ci right 7.919986e-05	k: 20	n:390000
Cons ci ratio: 9.052911e-02	ci left: 4.567943e-03	ci right 5.003567e-03	k: 1865	n:390000
KS ci ratio: 3.069735e-01	ci left: 3.538924e-04	ci right 4.844869e-04	k: 162	n:390000
SF3B2   390000 perm   134 sec   (2919 perm/sec)   p_kst 4.153846e-04   p_cons 4.782051e-03   p_joint 5.128205e-05

Joint ci ratio: 8.357228e-01	ci left: 3.249861e-05	ci right 8.025071e-05	k: 21	n:400000
Cons ci ratio: 8.971702e-02	ci left: 4.536826e-03	ci right 4.965397e-03	k: 1899	n:400000
KS ci ratio: 3.023707e-01	ci left: 3.565897e-04	ci right 4.858272e-04	k: 167	n:400000
SF3B2   400000 perm   139 sec   (2886 perm/sec)   p_kst 4.175000e-04   p_cons 4.747500e-03   p_joint 5.250000e-05

Joint ci ratio: 8.173526e-01	ci left: 3.362781e-05	ci right 8.123855e-05	k: 22	n:410000
Cons ci ratio: 8.862759e-02	ci left: 4.538249e-03	ci right 4.961480e-03	k: 1946	n:410000
KS ci ratio: 2.988341e-01	ci left: 3.569128e-04	ci right 4.844674e-04	k: 171	n:410000
SF3B2   410000 perm   144 sec   (2849 perm/sec)   p_kst 4.170732e-04   p_cons 4.746341e-03   p_joint 5.365854e-05

Joint ci ratio: 8.173531e-01	ci left: 3.282715e-05	ci right 7.930432e-05	k: 22	n:420000
Cons ci ratio: 8.744481e-02	ci left: 4.553609e-03	ci right 4.972315e-03	k: 1999	n:420000
KS ci ratio: 2.954188e-01	ci left: 3.572289e-04	ci right 4.831641e-04	k: 175	n:420000
SF3B2   420000 perm   149 sec   (2818 perm/sec)   p_kst 4.166667e-04   p_cons 4.759524e-03   p_joint 5.238095e-05

Joint ci ratio: 8.001434e-01	ci left: 3.390733e-05	ci right 8.025775e-05	k: 23	n:430000
Cons ci ratio: 8.635043e-02	ci left: 4.563740e-03	ci right 4.977861e-03	k: 2050	n:430000
KS ci ratio: 2.921180e-01	ci left: 3.575382e-04	ci right 4.819136e-04	k: 179	n:430000
SF3B2   430000 perm   154 sec   (2785 perm/sec)   p_kst 4.162791e-04   p_cons 4.767442e-03   p_joint 5.348837e-05

Joint ci ratio: 1.481607e+00	ci left: 5.004321e-06	ci right 2.968038e-05	k: 6	n:440000
Cons ci ratio: 8.545970e-02	ci left: 4.555645e-03	ci right 4.964555e-03	k: 2093	n:440000
KS ci ratio: 2.865975e-01	ci left: 3.641672e-04	ci right 4.880212e-04	k: 186	n:440000
SF3B2   440000 perm   160 sec   (2756 perm/sec)   p_kst 4.227273e-04   p_cons 4.756818e-03   p_joint 1.363636e-05

Joint ci ratio: 1.481608e+00	ci left: 4.893114e-06	ci right 2.902083e-05	k: 6	n:450000
Cons ci ratio: 8.461586e-02	ci left: 4.545756e-03	ci right 4.949550e-03	k: 2135	n:450000
KS ci ratio: 2.835807e-01	ci left: 3.643280e-04	ci right 4.866990e-04	k: 190	n:450000
SF3B2   450000 perm   165 sec   (2727 perm/sec)   p_kst 4.222222e-04   p_cons 4.744444e-03   p_joint 1.333333e-05

Joint ci ratio: 1.481608e+00	ci left: 4.786741e-06	ci right 2.838994e-05	k: 6	n:460000
Cons ci ratio: 8.352723e-02	ci left: 4.566117e-03	ci right 4.966247e-03	k: 2191	n:460000
KS ci ratio: 2.806572e-01	ci left: 3.644883e-04	ci right 4.854278e-04	k: 194	n:460000
SF3B2   460000 perm   170 sec   (2699 perm/sec)   p_kst 4.217391e-04   p_cons 4.763043e-03   p_joint 1.304348e-05

Joint ci ratio: 1.481608e+00	ci left: 4.684895e-06	ci right 2.778591e-05	k: 6	n:470000
Cons ci ratio: 8.264596e-02	ci left: 4.566888e-03	ci right 4.962660e-03	k: 2238	n:470000
KS ci ratio: 2.799413e-01	ci left: 3.587112e-04	ci right 4.773766e-04	k: 195	n:470000
SF3B2   470000 perm   176 sec   (2671 perm/sec)   p_kst 4.148936e-04   p_cons 4.761702e-03   p_joint 1.276596e-05

Joint ci ratio: 1.385916e+00	ci left: 5.863276e-06	ci right 3.004701e-05	k: 7	n:480000
Cons ci ratio: 8.175608e-02	ci left: 4.571730e-03	ci right 4.963452e-03	k: 2287	n:480000
KS ci ratio: 2.778235e-01	ci left: 3.570509e-04	ci right 4.741173e-04	k: 198	n:480000
SF3B2   480000 perm   182 sec   (2643 perm/sec)   p_kst 4.125000e-04   p_cons 4.764583e-03   p_joint 1.458333e-05

Joint ci ratio: 1.385917e+00	ci left: 5.743617e-06	ci right 2.943381e-05	k: 7	n:490000
Cons ci ratio: 8.077288e-02	ci left: 4.590394e-03	ci right 4.978763e-03	k: 2343	n:490000
KS ci ratio: 2.743975e-01	ci left: 3.592619e-04	ci right 4.753501e-04	k: 203	n:490000
SF3B2   490000 perm   187 sec   (2617 perm/sec)   p_kst 4.142857e-04   p_cons 4.781633e-03   p_joint 1.428571e-05

Joint ci ratio: 1.385917e+00	ci left: 5.628744e-06	ci right 2.884514e-05	k: 7	n:500000
Cons ci ratio: 7.977423e-02	ci left: 4.614220e-03	ci right 4.999553e-03	k: 2402	n:500000
KS ci ratio: 2.717463e-01	ci left: 3.595290e-04	ci right 4.743895e-04	k: 207	n:500000
SF3B2   500000 perm   193 sec   (2589 perm/sec)   p_kst 4.140000e-04   p_cons 4.804000e-03   p_joint 1.400000e-05

Joint ci ratio: 1.385917e+00	ci left: 5.518376e-06	ci right 2.827955e-05	k: 7	n:510000
Cons ci ratio: 7.908656e-02	ci left: 4.604461e-03	ci right 4.985512e-03	k: 2444	n:510000
KS ci ratio: 2.685376e-01	ci left: 3.616195e-04	ci right 4.755540e-04	k: 212	n:510000
SF3B2   510000 perm   199 sec   (2563 perm/sec)   p_kst 4.156863e-04   p_cons 4.792157e-03   p_joint 1.372549e-05

Joint ci ratio: 1.385917e+00	ci left: 5.412253e-06	ci right 2.773572e-05	k: 7	n:520000
Cons ci ratio: 7.840053e-02	ci left: 4.596977e-03	ci right 4.973958e-03	k: 2487	n:520000
KS ci ratio: 2.666666e-01	ci left: 3.600474e-04	ci right 4.725641e-04	k: 215	n:520000
SF3B2   520000 perm   205 sec   (2538 perm/sec)   p_kst 4.134615e-04   p_cons 4.782692e-03   p_joint 1.346154e-05

Joint ci ratio: 1.306654e+00	ci left: 6.516686e-06	ci right 2.974165e-05	k: 8	n:530000
Cons ci ratio: 7.776293e-02	ci left: 4.586088e-03	ci right 4.958980e-03	k: 2528	n:530000
KS ci ratio: 2.654410e-01	ci left: 3.567759e-04	ci right 4.676727e-04	k: 217	n:530000
SF3B2   530000 perm   211 sec   (2514 perm/sec)   p_kst 4.094340e-04   p_cons 4.769811e-03   p_joint 1.509434e-05

Joint ci ratio: 1.306655e+00	ci left: 6.396007e-06	ci right 2.919088e-05	k: 8	n:540000
Cons ci ratio: 7.711049e-02	ci left: 4.579248e-03	ci right 4.948319e-03	k: 2571	n:540000
KS ci ratio: 2.630388e-01	ci left: 3.570857e-04	ci right 4.669090e-04	k: 221	n:540000
SF3B2   540000 perm   217 sec   (2491 perm/sec)   p_kst 4.092593e-04   p_cons 4.761111e-03   p_joint 1.481481e-05

Joint ci ratio: 1.306655e+00	ci left: 6.279715e-06	ci right 2.866014e-05	k: 8	n:550000
Cons ci ratio: 7.612399e-02	ci left: 4.615476e-03	ci right 4.982497e-03	k: 2638	n:550000
KS ci ratio: 2.612796e-01	ci left: 3.556893e-04	ci right 4.642320e-04	k: 224	n:550000
SF3B2   550000 perm   223 sec   (2468 perm/sec)   p_kst 4.072727e-04   p_cons 4.796364e-03   p_joint 1.454545e-05

Joint ci ratio: 1.306655e+00	ci left: 6.167577e-06	ci right 2.814836e-05	k: 8	n:560000
Cons ci ratio: 7.532840e-02	ci left: 4.631165e-03	ci right 4.995416e-03	k: 2694	n:560000
KS ci ratio: 2.607017e-01	ci left: 3.510065e-04	ci right 4.578446e-04	k: 225	n:560000
SF3B2   560000 perm   229 sec   (2446 perm/sec)   p_kst 4.017857e-04   p_cons 4.810714e-03   p_joint 1.428571e-05

Joint ci ratio: 1.306655e+00	ci left: 6.059374e-06	ci right 2.765453e-05	k: 8	n:570000
Cons ci ratio: 7.470748e-02	ci left: 4.627382e-03	ci right 4.988205e-03	k: 2739	n:570000
KS ci ratio: 2.595562e-01	ci left: 3.481285e-04	ci right 4.535494e-04	k: 227	n:570000
SF3B2   570000 perm   235 sec   (2423 perm/sec)   p_kst 3.982456e-04   p_cons 4.805263e-03   p_joint 1.403509e-05

Joint ci ratio: 1.306655e+00	ci left: 5.954901e-06	ci right 2.717773e-05	k: 8	n:580000
Cons ci ratio: 7.420883e-02	ci left: 4.610204e-03	ci right 4.967184e-03	k: 2776	n:580000
KS ci ratio: 2.578655e-01	ci left: 3.469632e-04	ci right 4.512367e-04	k: 230	n:580000
SF3B2   580000 perm   242 sec   (2401 perm/sec)   p_kst 3.965517e-04   p_cons 4.786207e-03   p_joint 1.379310e-05

Joint ci ratio: 1.306656e+00	ci left: 5.853970e-06	ci right 2.671709e-05	k: 8	n:590000
Cons ci ratio: 7.349729e-02	ci left: 4.621901e-03	ci right 4.976209e-03	k: 2830	n:590000
KS ci ratio: 2.567568e-01	ci left: 3.442537e-04	ci right 4.471967e-04	k: 232	n:590000
SF3B2   590000 perm   248 sec   (2378 perm/sec)   p_kst 3.932203e-04   p_cons 4.796610e-03   p_joint 1.355932e-05

Joint ci ratio: 1.306656e+00	ci left: 5.756404e-06	ci right 2.627181e-05	k: 8	n:600000
Cons ci ratio: 7.298398e-02	ci left: 4.610314e-03	ci right 4.961161e-03	k: 2870	n:600000
KS ci ratio: 2.540452e-01	ci left: 3.463161e-04	ci right 4.486089e-04	k: 237	n:600000
SF3B2   600000 perm   255 sec   (2356 perm/sec)   p_kst 3.950000e-04   p_cons 4.783333e-03   p_joint 1.333333e-05

Joint ci ratio: 1.239602e+00	ci left: 6.746535e-06	ci right 2.800769e-05	k: 9	n:610000
Cons ci ratio: 7.231921e-02	ci left: 4.620042e-03	ci right 4.968293e-03	k: 2923	n:610000
KS ci ratio: 2.529849e-01	ci left: 3.437091e-04	ci right 4.447414e-04	k: 239	n:610000
SF3B2   610000 perm   261 sec   (2334 perm/sec)   p_kst 3.918033e-04   p_cons 4.791803e-03   p_joint 1.475410e-05

Joint ci ratio: 1.181913e+00	ci left: 7.734524e-06	ci right 2.966166e-05	k: 10	n:620000
Cons ci ratio: 7.180569e-02	ci left: 4.612046e-03	ci right 4.957122e-03	k: 2965	n:620000
KS ci ratio: 2.503899e-01	ci left: 3.457213e-04	ci right 4.461402e-04	k: 244	n:620000
SF3B2   620000 perm   268 sec   (2314 perm/sec)   p_kst 3.935484e-04   p_cons 4.782258e-03   p_joint 1.612903e-05

Joint ci ratio: 1.181913e+00	ci left: 7.611753e-06	ci right 2.919085e-05	k: 10	n:630000
Cons ci ratio: 7.126726e-02	ci left: 4.608990e-03	ci right 4.951144e-03	k: 3010	n:630000
KS ci ratio: 2.493745e-01	ci left: 3.432094e-04	ci right 4.424317e-04	k: 246	n:630000
SF3B2   630000 perm   275 sec   (2294 perm/sec)   p_kst 3.904762e-04   p_cons 4.777778e-03   p_joint 1.587302e-05

Joint ci ratio: 1.181913e+00	ci left: 7.492819e-06	ci right 2.873474e-05	k: 10	n:640000
Cons ci ratio: 7.057850e-02	ci left: 4.627528e-03	ci right 4.967603e-03	k: 3069	n:640000
KS ci ratio: 2.483714e-01	ci left: 3.407768e-04	ci right 4.388383e-04	k: 248	n:640000
SF3B2   640000 perm   281 sec   (2274 perm/sec)   p_kst 3.875000e-04   p_cons 4.795313e-03   p_joint 1.562500e-05

Joint ci ratio: 1.181914e+00	ci left: 7.377545e-06	ci right 2.829267e-05	k: 10	n:650000
Cons ci ratio: 6.995427e-02	ci left: 4.639465e-03	ci right 4.977279e-03	k: 3124	n:650000
KS ci ratio: 2.478747e-01	ci left: 3.369768e-04	ci right 4.337210e-04	k: 249	n:650000
SF3B2   650000 perm   288 sec   (2255 perm/sec)   p_kst 3.830769e-04   p_cons 4.806154e-03   p_joint 1.538462e-05

Joint ci ratio: 1.181914e+00	ci left: 7.265764e-06	ci right 2.786400e-05	k: 10	n:660000
Cons ci ratio: 6.935728e-02	ci left: 4.649564e-03	ci right 4.985108e-03	k: 3178	n:660000
KS ci ratio: 2.473810e-01	ci left: 3.332922e-04	ci right 4.287585e-04	k: 250	n:660000
SF3B2   660000 perm   295 sec   (2235 perm/sec)   p_kst 3.787879e-04   p_cons 4.815152e-03   p_joint 1.515152e-05

Joint ci ratio: 1.181914e+00	ci left: 7.157319e-06	ci right 2.744812e-05	k: 10	n:670000
Cons ci ratio: 6.895772e-02	ci left: 4.634435e-03	ci right 4.966884e-03	k: 3215	n:670000
KS ci ratio: 2.459159e-01	ci left: 3.325185e-04	ci right 4.271130e-04	k: 253	n:670000
SF3B2   670000 perm   302 sec   (2216 perm/sec)   p_kst 3.776119e-04   p_cons 4.798507e-03   p_joint 1.492537e-05

Joint ci ratio: 1.181914e+00	ci left: 7.052064e-06	ci right 2.704447e-05	k: 10	n:680000
Cons ci ratio: 6.844880e-02	ci left: 4.635657e-03	ci right 4.965642e-03	k: 3263	n:680000
KS ci ratio: 2.449537e-01	ci left: 3.303888e-04	ci right 4.239537e-04	k: 255	n:680000
SF3B2   680000 perm   309 sec   (2197 perm/sec)   p_kst 3.750000e-04   p_cons 4.798529e-03   p_joint 1.470588e-05

Joint ci ratio: 1.181914e+00	ci left: 6.949860e-06	ci right 2.665253e-05	k: 10	n:690000
Cons ci ratio: 6.785841e-02	ci left: 4.649676e-03	ci right 4.977691e-03	k: 3320	n:690000
KS ci ratio: 2.430621e-01	ci left: 3.310432e-04	ci right 4.239603e-04	k: 259	n:690000
SF3B2   690000 perm   317 sec   (2179 perm/sec)   p_kst 3.753623e-04   p_cons 4.811594e-03   p_joint 1.449275e-05

Joint ci ratio: 1.181914e+00	ci left: 6.850576e-06	ci right 2.627178e-05	k: 10	n:700000
Cons ci ratio: 6.735319e-02	ci left: 4.653473e-03	ci right 4.979217e-03	k: 3370	n:700000
KS ci ratio: 2.425965e-01	ci left: 3.276556e-04	ci right 4.194191e-04	k: 260	n:700000
SF3B2   700000 perm   324 sec   (2161 perm/sec)   p_kst 3.714286e-04   p_cons 4.814286e-03   p_joint 1.428571e-05

Joint ci ratio: 1.181914e+00	ci left: 6.754089e-06	ci right 2.590176e-05	k: 10	n:710000
Cons ci ratio: 6.680025e-02	ci left: 4.665483e-03	ci right 4.989282e-03	k: 3426	n:710000
KS ci ratio: 2.398548e-01	ci left: 3.309808e-04	ci right 4.224722e-04	k: 266	n:710000
SF3B2   710000 perm   331 sec   (2144 perm/sec)   p_kst 3.746479e-04   p_cons 4.825352e-03   p_joint 1.408451e-05

Joint ci ratio: 1.181915e+00	ci left: 6.660282e-06	ci right 2.554201e-05	k: 10	n:720000
Cons ci ratio: 6.626070e-02	ci left: 4.677169e-03	ci right 4.999057e-03	k: 3482	n:720000
KS ci ratio: 2.389618e-01	ci left: 3.289949e-04	ci right 4.195487e-04	k: 268	n:720000
SF3B2   720000 perm   339 sec   (2126 perm/sec)   p_kst 3.722222e-04   p_cons 4.836111e-03   p_joint 1.388889e-05

Joint ci ratio: 5.103196e-01	ci left: 6.033181e-05	ci right 1.027090e-04	k: 58	n:730000
Cons ci ratio: 6.572469e-02	ci left: 4.689893e-03	ci right 5.009946e-03	k: 3539	n:730000
KS ci ratio: 2.380787e-01	ci left: 3.270641e-04	ci right 4.167047e-04	k: 270	n:730000
SF3B2   730000 perm   346 sec   (2109 perm/sec)   p_kst 3.698630e-04   p_cons 4.847945e-03   p_joint 7.945205e-05

Joint ci ratio: 5.060490e-01	ci left: 6.069450e-05	ci right 1.028444e-04	k: 59	n:740000
Cons ci ratio: 6.531105e-02	ci left: 4.686330e-03	ci right 5.004051e-03	k: 3584	n:740000
KS ci ratio: 2.367719e-01	ci left: 3.264572e-04	ci right 4.153683e-04	k: 273	n:740000
SF3B2   740000 perm   354 sec   (2093 perm/sec)   p_kst 3.689189e-04   p_cons 4.843243e-03   p_joint 7.972973e-05

Joint ci ratio: 3.505860e-01	ci left: 1.375175e-04	ci right 1.971226e-04	k: 124	n:750000
Cons ci ratio: 6.483336e-02	ci left: 4.693363e-03	ci right 5.009146e-03	k: 3637	n:750000
KS ci ratio: 2.350622e-01	ci left: 3.271226e-04	ci right 4.154781e-04	k: 277	n:750000
SF3B2   750000 perm   361 sec   (2075 perm/sec)   p_kst 3.693333e-04   p_cons 4.849333e-03   p_joint 1.653333e-04

Joint ci ratio: 3.478145e-01	ci left: 1.381089e-04	ci right 1.973904e-04	k: 126	n:760000
Cons ci ratio: 6.437478e-02	ci left: 4.698925e-03	ci right 5.012762e-03	k: 3689	n:760000
KS ci ratio: 2.338042e-01	ci left: 3.265339e-04	ci right 4.141900e-04	k: 280	n:760000
SF3B2   760000 perm   369 sec   (2059 perm/sec)   p_kst 3.684211e-04   p_cons 4.853947e-03   p_joint 1.657895e-04

Joint ci ratio: 3.451076e-01	ci left: 1.386867e-04	ci right 1.976494e-04	k: 128	n:770000
Cons ci ratio: 6.388291e-02	ci left: 4.710740e-03	ci right 5.022873e-03	k: 3746	n:770000
KS ci ratio: 2.321576e-01	ci left: 3.271848e-04	ci right 4.143084e-04	k: 284	n:770000
SF3B2   770000 perm   377 sec   (2042 perm/sec)   p_kst 3.688312e-04   p_cons 4.864935e-03   p_joint 1.662338e-04

Joint ci ratio: 3.424630e-01	ci left: 1.392514e-04	ci right 1.979000e-04	k: 130	n:780000
Cons ci ratio: 6.345245e-02	ci left: 4.714689e-03	ci right 5.024903e-03	k: 3797	n:780000
KS ci ratio: 2.309454e-01	ci left: 3.266132e-04	ci right 4.130657e-04	k: 287	n:780000
SF3B2   780000 perm   385 sec   (2027 perm/sec)   p_kst 3.679487e-04   p_cons 4.867949e-03   p_joint 1.666667e-04

Joint ci ratio: 2.297520e-01	ci left: 3.260571e-04	ci right 4.118532e-04	k: 290	n:790000
Cons ci ratio: 6.288299e-02	ci left: 4.740974e-03	ci right 5.050015e-03	k: 3866	n:790000
KS ci ratio: 2.297520e-01	ci left: 3.260571e-04	ci right 4.118532e-04	k: 290	n:790000
SF3B2   790000 perm   393 sec   (2010 perm/sec)   p_kst 3.670886e-04   p_cons 4.893671e-03   p_joint 3.670886e-04

Joint ci ratio: 2.293586e-01	ci left: 3.231595e-04	ci right 4.080269e-04	k: 291	n:800000
Cons ci ratio: 6.246429e-02	ci left: 4.745694e-03	ci right 5.052908e-03	k: 3918	n:800000
KS ci ratio: 2.293586e-01	ci left: 3.231595e-04	ci right 4.080269e-04	k: 291	n:800000
SF3B2   800000 perm   401 sec   (1995 perm/sec)   p_kst 3.637500e-04   p_cons 4.897500e-03   p_joint 3.637500e-04

Joint ci ratio: 2.285774e-01	ci left: 3.214974e-04	ci right 4.056001e-04	k: 293	n:810000
Cons ci ratio: 6.199895e-02	ci left: 4.758812e-03	ci right 5.064498e-03	k: 3977	n:810000
KS ci ratio: 2.285774e-01	ci left: 3.214974e-04	ci right 4.056001e-04	k: 293	n:810000
SF3B2   810000 perm   409 sec   (1979 perm/sec)   p_kst 3.617284e-04   p_cons 4.909877e-03   p_joint 3.617284e-04

Joint ci ratio: 2.259034e-01	ci left: 3.256274e-04	ci right 4.096753e-04	k: 300	n:820000
Cons ci ratio: 6.161292e-02	ci left: 4.760811e-03	ci right 5.064654e-03	k: 4027	n:820000
KS ci ratio: 2.259034e-01	ci left: 3.256274e-04	ci right 4.096753e-04	k: 300	n:820000
SF3B2   820000 perm   418 sec   (1964 perm/sec)   p_kst 3.658537e-04   p_cons 4.910976e-03   p_joint 3.658537e-04

Joint ci ratio: 2.259039e-01	ci left: 3.217041e-04	ci right 4.047396e-04	k: 300	n:830000
Cons ci ratio: 6.132474e-02	ci left: 4.748530e-03	ci right 5.050122e-03	k: 4065	n:830000
KS ci ratio: 2.259039e-01	ci left: 3.217041e-04	ci right 4.047396e-04	k: 300	n:830000
SF3B2   830000 perm   426 sec   (1948 perm/sec)   p_kst 3.614458e-04   p_cons 4.897590e-03   p_joint 3.614458e-04

Joint ci ratio: 2.247866e-01	ci left: 3.212441e-04	ci right 4.036940e-04	k: 303	n:840000
Cons ci ratio: 6.094365e-02	ci left: 4.751787e-03	ci right 5.051643e-03	k: 4116	n:840000
KS ci ratio: 2.247866e-01	ci left: 3.212441e-04	ci right 4.036940e-04	k: 303	n:840000
SF3B2   840000 perm   434 sec   (1934 perm/sec)   p_kst 3.607143e-04   p_cons 4.900000e-03   p_joint 3.607143e-04

Joint ci ratio: 5.384363e-01	ci left: 4.568984e-05	ci right 8.022404e-05	k: 52	n:850000
Cons ci ratio: 6.070144e-02	ci left: 4.734115e-03	ci right 5.031627e-03	k: 4149	n:850000
KS ci ratio: 2.244181e-01	ci left: 3.185750e-04	ci right 4.001872e-04	k: 304	n:850000
SF3B2   850000 perm   443 sec   (1919 perm/sec)   p_kst 3.576471e-04   p_cons 4.881176e-03   p_joint 6.117647e-05

Joint ci ratio: 5.384365e-01	ci left: 4.515856e-05	ci right 7.929121e-05	k: 52	n:860000
Cons ci ratio: 6.025256e-02	ci left: 4.750071e-03	ci right 5.046302e-03	k: 4211	n:860000
KS ci ratio: 2.229608e-01	ci left: 3.192612e-04	ci right 4.004452e-04	k: 308	n:860000
SF3B2   860000 perm   451 sec   (1905 perm/sec)   p_kst 3.581395e-04   p_cons 4.896512e-03   p_joint 6.046512e-05

Joint ci ratio: 5.334276e-01	ci left: 4.563324e-05	ci right 7.968351e-05	k: 53	n:870000
Cons ci ratio: 5.991218e-02	ci left: 4.749816e-03	ci right 5.044300e-03	k: 4259	n:870000
KS ci ratio: 2.201289e-01	ci left: 3.242768e-04	ci right 4.055471e-04	k: 316	n:870000
SF3B2   870000 perm   460 sec   (1891 perm/sec)   p_kst 3.632184e-04   p_cons 4.895402e-03   p_joint 6.091954e-05

Joint ci ratio: 5.285559e-01	ci left: 4.609858e-05	ci right 8.006549e-05	k: 54	n:880000
Cons ci ratio: 5.964014e-02	ci left: 4.739496e-03	ci right 5.031960e-03	k: 4298	n:880000
KS ci ratio: 2.187530e-01	ci left: 3.248875e-04	ci right 4.057335e-04	k: 320	n:880000
SF3B2   880000 perm   469 sec   (1877 perm/sec)   p_kst 3.636364e-04   p_cons 4.884091e-03   p_joint 6.136364e-05

Joint ci ratio: 5.191998e-01	ci left: 4.753045e-05	ci right 8.170784e-05	k: 56	n:890000
Cons ci ratio: 5.926205e-02	ci left: 4.747123e-03	ci right 5.038136e-03	k: 4353	n:890000
KS ci ratio: 2.177380e-01	ci left: 3.244236e-04	ci right 4.047295e-04	k: 323	n:890000
SF3B2   890000 perm   478 sec   (1863 perm/sec)   p_kst 3.629213e-04   p_cons 4.891011e-03   p_joint 6.292135e-05

Joint ci ratio: 5.192000e-01	ci left: 4.700233e-05	ci right 8.079998e-05	k: 56	n:900000
Cons ci ratio: 5.892465e-02	ci left: 4.749112e-03	ci right 5.038533e-03	k: 4403	n:900000
KS ci ratio: 2.170693e-01	ci left: 3.229201e-04	ci right 4.025755e-04	k: 325	n:900000
SF3B2   900000 perm   487 sec   (1850 perm/sec)   p_kst 3.611111e-04   p_cons 4.892222e-03   p_joint 6.222222e-05

Joint ci ratio: 5.147045e-01	ci left: 4.744126e-05	ci right 8.115322e-05	k: 57	n:910000
Cons ci ratio: 5.848746e-02	ci left: 4.768388e-03	ci right 5.056755e-03	k: 4469	n:910000
KS ci ratio: 2.160774e-01	ci left: 3.224894e-04	ci right 4.016269e-04	k: 328	n:910000
SF3B2   910000 perm   495 sec   (1837 perm/sec)   p_kst 3.604396e-04   p_cons 4.910989e-03   p_joint 6.263736e-05

Joint ci ratio: 5.103239e-01	ci left: 4.787189e-05	ci right 8.149756e-05	k: 58	n:920000
Cons ci ratio: 5.820836e-02	ci left: 4.762615e-03	ci right 5.049212e-03	k: 4512	n:920000
KS ci ratio: 2.150990e-01	ci left: 3.220689e-04	ci right 4.006981e-04	k: 331	n:920000
SF3B2   920000 perm   504 sec   (1824 perm/sec)   p_kst 3.597826e-04   p_cons 4.904348e-03   p_joint 6.304348e-05

Joint ci ratio: 5.103241e-01	ci left: 4.735714e-05	ci right 8.062125e-05	k: 58	n:930000
Cons ci ratio: 5.787579e-02	ci left: 4.766506e-03	ci right 5.051644e-03	k: 4564	n:930000
KS ci ratio: 2.144542e-01	ci left: 3.206406e-04	ci right 3.986556e-04	k: 333	n:930000
SF3B2   930000 perm   513 sec   (1811 perm/sec)   p_kst 3.580645e-04   p_cons 4.907527e-03   p_joint 6.236559e-05

Joint ci ratio: 5.103242e-01	ci left: 4.685334e-05	ci right 7.976359e-05	k: 58	n:940000
Cons ci ratio: 5.756766e-02	ci left: 4.767174e-03	ci right 5.050783e-03	k: 4613	n:940000
KS ci ratio: 2.138152e-01	ci left: 3.192431e-04	ci right 3.966562e-04	k: 335	n:940000
SF3B2   940000 perm   523 sec   (1798 perm/sec)   p_kst 3.563830e-04   p_cons 4.907447e-03   p_joint 6.170213e-05

Joint ci ratio: 5.060536e-01	ci left: 4.727773e-05	ci right 8.011054e-05	k: 59	n:950000
Cons ci ratio: 5.732620e-02	ci left: 4.757456e-03	ci right 5.039260e-03	k: 4652	n:950000
KS ci ratio: 2.125537e-01	ci left: 3.198684e-04	ci right 3.969158e-04	k: 339	n:950000
SF3B2   950000 perm   532 sec   (1786 perm/sec)   p_kst 3.568421e-04   p_cons 4.896842e-03   p_joint 6.210526e-05

Joint ci ratio: 5.060537e-01	ci left: 4.678525e-05	ci right 7.927607e-05	k: 59	n:960000
Cons ci ratio: 5.702671e-02	ci left: 4.758211e-03	ci right 5.038539e-03	k: 4701	n:960000
KS ci ratio: 2.110077e-01	ci left: 3.214686e-04	ci right 3.982654e-04	k: 344	n:960000
SF3B2   960000 perm   541 sec   (1774 perm/sec)   p_kst 3.583333e-04   p_cons 4.896875e-03   p_joint 6.145833e-05

Joint ci ratio: 5.018885e-01	ci left: 4.720271e-05	ci right 7.961980e-05	k: 60	n:970000
Cons ci ratio: 5.670190e-02	ci left: 4.764036e-03	ci right 5.043057e-03	k: 4755	n:970000
KS ci ratio: 2.097949e-01	ci left: 3.220609e-04	ci right 3.985002e-04	k: 348	n:970000
SF3B2   970000 perm   551 sec   (1761 perm/sec)   p_kst 3.587629e-04   p_cons 4.902062e-03   p_joint 6.185567e-05

Joint ci ratio: 5.018887e-01	ci left: 4.672105e-05	ci right 7.880736e-05	k: 60	n:980000
Cons ci ratio: 5.653633e-02	ci left: 4.743589e-03	ci right 5.020574e-03	k: 4783	n:980000
KS ci ratio: 2.086029e-01	ci left: 3.226424e-04	ci right 3.987290e-04	k: 352	n:980000
SF3B2   980000 perm   560 sec   (1750 perm/sec)   p_kst 3.591837e-04   p_cons 4.880612e-03   p_joint 6.122449e-05

Joint ci ratio: 5.018889e-01	ci left: 4.624912e-05	ci right 7.801133e-05	k: 60	n:990000
Cons ci ratio: 5.634279e-02	ci left: 4.728536e-03	ci right 5.003666e-03	k: 4816	n:990000
KS ci ratio: 2.077221e-01	ci left: 3.222557e-04	ci right 3.978895e-04	k: 355	n:990000
SF3B2   990000 perm   570 sec   (1738 perm/sec)   p_kst 3.585859e-04   p_cons 4.864646e-03   p_joint 6.060606e-05

Joint ci ratio: 4.978248e-01	ci left: 4.666048e-05	ci right 7.835637e-05	k: 61	n:1000000
Cons ci ratio: 5.604103e-02	ci left: 4.732520e-03	ci right 5.006360e-03	k: 4868	n:1000000
KS ci ratio: 2.062784e-01	ci left: 3.237740e-04	ci right 3.991694e-04	k: 360	n:1000000
SF3B2   1000000 perm   579 sec   (1727 perm/sec)   p_kst 3.600000e-04   p_cons 4.868000e-03   p_joint 6.100000e-05

Joint ci ratio: 4.978250e-01	ci left: 4.619849e-05	ci right 7.758057e-05	k: 61	n:1010000
Cons ci ratio: 5.572699e-02	ci left: 4.739359e-03	ci right 5.012008e-03	k: 4923	n:1010000
KS ci ratio: 2.045851e-01	ci left: 3.262034e-04	ci right 4.014629e-04	k: 366	n:1010000
SF3B2   1010000 perm   589 sec   (1715 perm/sec)   p_kst 3.623762e-04   p_cons 4.874257e-03   p_joint 6.039604e-05

Joint ci ratio: 4.978251e-01	ci left: 4.574556e-05	ci right 7.681999e-05	k: 61	n:1020000
Cons ci ratio: 5.546297e-02	ci left: 4.738332e-03	ci right 5.009589e-03	k: 4970	n:1020000
KS ci ratio: 2.037540e-01	ci left: 3.257961e-04	ci right 4.006184e-04	k: 369	n:1020000
SF3B2   1020000 perm   598 sec   (1704 perm/sec)   p_kst 3.617647e-04   p_cons 4.872549e-03   p_joint 5.980392e-05

Joint ci ratio: 4.978253e-01	ci left: 4.530143e-05	ci right 7.607417e-05	k: 61	n:1030000
Cons ci ratio: 5.528021e-02	ci left: 4.723923e-03	ci right 4.993436e-03	k: 5003	n:1030000
KS ci ratio: 2.034795e-01	ci left: 3.235544e-04	ci right 3.977492e-04	k: 370	n:1030000
SF3B2   1030000 perm   608 sec   (1693 perm/sec)   p_kst 3.592233e-04   p_cons 4.857282e-03   p_joint 5.922330e-05

Joint ci ratio: 4.978254e-01	ci left: 4.486583e-05	ci right 7.534269e-05	k: 61	n:1040000
Cons ci ratio: 5.500604e-02	ci left: 4.725915e-03	ci right 4.994162e-03	k: 5053	n:1040000
KS ci ratio: 2.032061e-01	ci left: 3.213558e-04	ci right 3.949352e-04	k: 371	n:1040000
SF3B2   1040000 perm   618 sec   (1683 perm/sec)   p_kst 3.567308e-04   p_cons 4.858654e-03   p_joint 5.865385e-05

Joint ci ratio: 4.978256e-01	ci left: 4.443854e-05	ci right 7.462515e-05	k: 61	n:1050000
Cons ci ratio: 5.482233e-02	ci left: 4.712842e-03	ci right 4.979425e-03	k: 5087	n:1050000
KS ci ratio: 2.021223e-01	ci left: 3.219115e-04	ci right 3.951765e-04	k: 375	n:1050000
SF3B2   1050000 perm   628 sec   (1672 perm/sec)   p_kst 3.571429e-04   p_cons 4.844762e-03   p_joint 5.809524e-05

Joint ci ratio: 4.978257e-01	ci left: 4.401930e-05	ci right 7.392114e-05	k: 61	n:1060000
Cons ci ratio: 5.462438e-02	ci left: 4.702808e-03	ci right 4.967833e-03	k: 5124	n:1060000
KS ci ratio: 2.015870e-01	ci left: 3.206660e-04	ci right 3.934305e-04	k: 377	n:1060000
SF3B2   1060000 perm   638 sec   (1662 perm/sec)   p_kst 3.556604e-04   p_cons 4.833962e-03   p_joint 5.754717e-05

Joint ci ratio: 4.899851e-01	ci left: 4.524415e-05	ci right 7.533056e-05	k: 63	n:1070000
Cons ci ratio: 5.439679e-02	ci left: 4.698496e-03	ci right 4.962140e-03	k: 5167	n:1070000
KS ci ratio: 2.005287e-01	ci left: 3.212193e-04	ci right 3.936798e-04	k: 381	n:1070000
SF3B2   1070000 perm   649 sec   (1650 perm/sec)   p_kst 3.560748e-04   p_cons 4.828972e-03   p_joint 5.887850e-05

Joint ci ratio: 1.012132e+00	ci left: 7.086990e-06	ci right 2.174955e-05	k: 14	n:1080000
Cons ci ratio: 5.411466e-02	ci left: 4.704313e-03	ci right 4.966872e-03	k: 5221	n:1080000
KS ci ratio: 1.989720e-01	ci left: 3.235228e-04	ci right 3.958676e-04	k: 387	n:1080000
SF3B2   1080000 perm   659 sec   (1639 perm/sec)   p_kst 3.583333e-04   p_cons 4.834259e-03   p_joint 1.296296e-05

Joint ci ratio: 1.012132e+00	ci left: 7.021972e-06	ci right 2.155002e-05	k: 14	n:1090000
Cons ci ratio: 5.386766e-02	ci left: 4.704597e-03	ci right 4.965935e-03	k: 5269	n:1090000
KS ci ratio: 1.982073e-01	ci left: 3.231701e-04	ci right 3.951248e-04	k: 390	n:1090000
SF3B2   1090000 perm   669 sec   (1629 perm/sec)   p_kst 3.577982e-04   p_cons 4.833945e-03   p_joint 1.284404e-05

Joint ci ratio: 1.012132e+00	ci left: 6.958135e-06	ci right 2.135411e-05	k: 14	n:1100000
Cons ci ratio: 5.363922e-02	ci left: 4.702187e-03	ci right 4.962249e-03	k: 5314	n:1100000
KS ci ratio: 1.977024e-01	ci left: 3.219603e-04	ci right 3.934410e-04	k: 392	n:1100000
SF3B2   1100000 perm   679 sec   (1619 perm/sec)   p_kst 3.563636e-04   p_cons 4.830909e-03   p_joint 1.272727e-05

Joint ci ratio: 1.012132e+00	ci left: 6.895449e-06	ci right 2.116173e-05	k: 14	n:1110000
Cons ci ratio: 5.336866e-02	ci left: 4.707823e-03	ci right 4.966843e-03	k: 5368	n:1110000
KS ci ratio: 1.969522e-01	ci left: 3.216289e-04	ci right 3.927325e-04	k: 395	n:1110000
SF3B2   1110000 perm   690 sec   (1609 perm/sec)   p_kst 3.558559e-04   p_cons 4.836036e-03   p_joint 1.261261e-05

Joint ci ratio: 9.799926e-01	ci left: 7.495899e-06	ci right 2.208939e-05	k: 15	n:1120000
Cons ci ratio: 5.314155e-02	ci left: 4.706313e-03	ci right 4.964115e-03	k: 5414	n:1120000
KS ci ratio: 1.959649e-01	ci left: 3.221530e-04	ci right 3.929728e-04	k: 399	n:1120000
SF3B2   1120000 perm   701 sec   (1599 perm/sec)   p_kst 3.562500e-04   p_cons 4.833929e-03   p_joint 1.339286e-05

Joint ci ratio: 9.799926e-01	ci left: 7.429564e-06	ci right 2.189390e-05	k: 15	n:1130000
Cons ci ratio: 5.283959e-02	ci left: 4.718805e-03	ci right 4.975778e-03	k: 5476	n:1130000
KS ci ratio: 1.942721e-01	ci left: 3.251942e-04	ci right 3.959921e-04	k: 406	n:1130000
SF3B2   1130000 perm   711 sec   (1589 perm/sec)   p_kst 3.592920e-04   p_cons 4.846018e-03   p_joint 1.327434e-05

Joint ci ratio: 9.507321e-01	ci left: 8.022286e-06	ci right 2.279200e-05	k: 16	n:1140000
Cons ci ratio: 5.264789e-02	ci left: 4.712037e-03	ci right 4.967682e-03	k: 5516	n:1140000
KS ci ratio: 1.940341e-01	ci left: 3.231761e-04	ci right 3.934383e-04	k: 407	n:1140000
SF3B2   1140000 perm   722 sec   (1579 perm/sec)   p_kst 3.570175e-04   p_cons 4.838596e-03   p_joint 1.403509e-05

Joint ci ratio: 9.507322e-01	ci left: 7.952527e-06	ci right 2.259381e-05	k: 16	n:1150000
Cons ci ratio: 5.242509e-02	ci left: 4.711395e-03	ci right 4.965891e-03	k: 5563	n:1150000
KS ci ratio: 1.933247e-01	ci left: 3.228481e-04	ci right 3.927521e-04	k: 410	n:1150000
SF3B2   1150000 perm   733 sec   (1569 perm/sec)   p_kst 3.565217e-04   p_cons 4.837391e-03   p_joint 1.391304e-05

Joint ci ratio: 4.556760e-01	ci left: 4.932820e-05	ci right 7.912569e-05	k: 73	n:1160000
Cons ci ratio: 5.216307e-02	ci left: 4.718425e-03	ci right 4.971988e-03	k: 5619	n:1160000
KS ci ratio: 1.926230e-01	ci left: 3.225262e-04	ci right 3.920773e-04	k: 413	n:1160000
SF3B2   1160000 perm   744 sec   (1560 perm/sec)   p_kst 3.560345e-04   p_cons 4.843966e-03   p_joint 6.293103e-05

Joint ci ratio: 4.556761e-01	ci left: 4.890659e-05	ci right 7.844940e-05	k: 73	n:1170000
Cons ci ratio: 5.189116e-02	ci left: 4.727869e-03	ci right 4.980575e-03	k: 5678	n:1170000
KS ci ratio: 1.921596e-01	ci left: 3.213966e-04	ci right 3.905179e-04	k: 415	n:1170000
SF3B2   1170000 perm   755 sec   (1550 perm/sec)   p_kst 3.547009e-04   p_cons 4.852991e-03   p_joint 6.239316e-05

Joint ci ratio: 9.239454e-01	ci left: 8.392502e-06	ci right 2.306655e-05	k: 17	n:1180000
Cons ci ratio: 5.170048e-02	ci left: 4.722934e-03	ci right 4.974421e-03	k: 5720	n:1180000
KS ci ratio: 1.903377e-01	ci left: 3.251280e-04	ci right 3.943122e-04	k: 423	n:1180000
SF3B2   1180000 perm   766 sec   (1541 perm/sec)   p_kst 3.584746e-04   p_cons 4.847458e-03   p_joint 1.440678e-05

Joint ci ratio: 9.239455e-01	ci left: 8.321976e-06	ci right 2.287271e-05	k: 17	n:1190000
Cons ci ratio: 5.149393e-02	ci left: 4.721402e-03	ci right 4.971774e-03	k: 5766	n:1190000
KS ci ratio: 1.887855e-01	ci left: 3.279991e-04	ci right 3.971598e-04	k: 430	n:1190000
SF3B2   1190000 perm   777 sec   (1532 perm/sec)   p_kst 3.613445e-04   p_cons 4.845378e-03   p_joint 1.428571e-05

Joint ci ratio: 9.239455e-01	ci left: 8.252626e-06	ci right 2.268211e-05	k: 17	n:1200000
Cons ci ratio: 5.128983e-02	ci left: 4.719898e-03	ci right 4.969168e-03	k: 5812	n:1200000
KS ci ratio: 1.874848e-01	ci left: 3.300303e-04	ci right 3.990853e-04	k: 436	n:1200000
SF3B2   1200000 perm   788 sec   (1523 perm/sec)   p_kst 3.633333e-04   p_cons 4.843333e-03   p_joint 1.416667e-05

Joint ci ratio: 9.239456e-01	ci left: 8.184423e-06	ci right 2.249465e-05	k: 17	n:1210000
Cons ci ratio: 5.108814e-02	ci left: 4.718420e-03	ci right 4.966604e-03	k: 5858	n:1210000
KS ci ratio: 1.864213e-01	ci left: 3.312417e-04	ci right 4.001125e-04	k: 441	n:1210000
SF3B2   1210000 perm   799 sec   (1514 perm/sec)   p_kst 3.644628e-04   p_cons 4.841322e-03   p_joint 1.404959e-05

Joint ci ratio: 9.239457e-01	ci left: 8.117337e-06	ci right 2.231027e-05	k: 17	n:1220000
Cons ci ratio: 5.088449e-02	ci left: 4.717778e-03	ci right 4.964910e-03	k: 5905	n:1220000
KS ci ratio: 1.853756e-01	ci left: 3.324342e-04	ci right 4.011217e-04	k: 446	n:1220000
SF3B2   1220000 perm   811 sec   (1505 perm/sec)   p_kst 3.655738e-04   p_cons 4.840164e-03   p_joint 1.393443e-05

Joint ci ratio: 9.239457e-01	ci left: 8.051342e-06	ci right 2.212889e-05	k: 17	n:1230000
Cons ci ratio: 5.069181e-02	ci left: 4.715543e-03	ci right 4.961595e-03	k: 5950	n:1230000
KS ci ratio: 1.851688e-01	ci left: 3.305068e-04	ci right 3.987113e-04	k: 447	n:1230000
SF3B2   1230000 perm   822 sec   (1497 perm/sec)   p_kst 3.634146e-04   p_cons 4.837398e-03   p_joint 1.382114e-05

Joint ci ratio: 9.239458e-01	ci left: 7.986412e-06	ci right 2.195043e-05	k: 17	n:1240000
Cons ci ratio: 5.051400e-02	ci left: 4.710956e-03	ci right 4.955882e-03	k: 5992	n:1240000
KS ci ratio: 1.847570e-01	ci left: 3.293796e-04	ci right 3.971834e-04	k: 449	n:1240000
SF3B2   1240000 perm   833 sec   (1488 perm/sec)   p_kst 3.620968e-04   p_cons 4.832258e-03   p_joint 1.370968e-05

Joint ci ratio: 9.239458e-01	ci left: 7.922520e-06	ci right 2.177483e-05	k: 17	n:1250000
Cons ci ratio: 5.030037e-02	ci left: 4.713554e-03	ci right 4.957549e-03	k: 6043	n:1250000
KS ci ratio: 1.839412e-01	ci left: 3.297969e-04	ci right 3.973534e-04	k: 453	n:1250000
SF3B2   1250000 perm   845 sec   (1480 perm/sec)   p_kst 3.624000e-04   p_cons 4.834400e-03   p_joint 1.360000e-05

Joint ci ratio: 9.239459e-01	ci left: 7.859643e-06	ci right 2.160201e-05	k: 17	n:1260000
Cons ci ratio: 5.013077e-02	ci left: 4.708276e-03	ci right 4.951152e-03	k: 6084	n:1260000
KS ci ratio: 1.837392e-01	ci left: 3.279366e-04	ci right 3.950300e-04	k: 454	n:1260000
SF3B2   1260000 perm   856 sec   (1471 perm/sec)   p_kst 3.603175e-04   p_cons 4.828571e-03   p_joint 1.349206e-05

Joint ci ratio: 9.239459e-01	ci left: 7.797756e-06	ci right 2.143192e-05	k: 17	n:1270000
Cons ci ratio: 4.995468e-02	ci left: 4.704637e-03	ci right 4.946448e-03	k: 6127	n:1270000
KS ci ratio: 1.831365e-01	ci left: 3.276081e-04	ci right 3.943901e-04	k: 457	n:1270000
SF3B2   1270000 perm   868 sec   (1463 perm/sec)   p_kst 3.598425e-04   p_cons 4.824409e-03   p_joint 1.338583e-05

Joint ci ratio: 9.239460e-01	ci left: 7.736836e-06	ci right 2.126448e-05	k: 17	n:1280000
Cons ci ratio: 4.971168e-02	ci left: 4.714174e-03	ci right 4.955262e-03	k: 6187	n:1280000
KS ci ratio: 1.827380e-01	ci left: 3.265396e-04	ci right 3.929429e-04	k: 459	n:1280000
SF3B2   1280000 perm   880 sec   (1455 perm/sec)   p_kst 3.585938e-04   p_cons 4.833594e-03   p_joint 1.328125e-05

Joint ci ratio: 9.239461e-01	ci left: 7.676860e-06	ci right 2.109964e-05	k: 17	n:1290000
Cons ci ratio: 4.951202e-02	ci left: 4.715909e-03	ci right 4.956090e-03	k: 6237	n:1290000
KS ci ratio: 1.819486e-01	ci left: 3.269676e-04	ci right 3.931390e-04	k: 463	n:1290000
SF3B2   1290000 perm   891 sec   (1447 perm/sec)   p_kst 3.589147e-04   p_cons 4.834884e-03   p_joint 1.317829e-05

Joint ci ratio: 9.239461e-01	ci left: 7.617807e-06	ci right 2.093734e-05	k: 17	n:1300000
Cons ci ratio: 4.930686e-02	ci left: 4.719139e-03	ci right 4.958460e-03	k: 6289	n:1300000
KS ci ratio: 1.803998e-01	ci left: 3.303273e-04	ci right 3.965474e-04	k: 471	n:1300000
SF3B2   1300000 perm   903 sec   (1439 perm/sec)   p_kst 3.623077e-04   p_cons 4.837692e-03   p_joint 1.307692e-05

Joint ci ratio: 9.239462e-01	ci left: 7.559656e-06	ci right 2.077751e-05	k: 17	n:1310000
Cons ci ratio: 4.911981e-02	ci left: 4.719305e-03	ci right 4.957701e-03	k: 6337	n:1310000
KS ci ratio: 1.794517e-01	ci left: 3.314506e-04	ci right 3.975088e-04	k: 476	n:1310000
SF3B2   1310000 perm   915 sec   (1431 perm/sec)   p_kst 3.633588e-04   p_cons 4.837405e-03   p_joint 1.297710e-05

Joint ci ratio: 9.239462e-01	ci left: 7.502386e-06	ci right 2.062011e-05	k: 17	n:1320000
Cons ci ratio: 4.888873e-02	ci left: 4.728451e-03	ci right 4.966154e-03	k: 6397	n:1320000
KS ci ratio: 1.790768e-01	ci left: 3.303868e-04	ci right 3.960804e-04	k: 478	n:1320000
SF3B2   1320000 perm   927 sec   (1424 perm/sec)   p_kst 3.621212e-04   p_cons 4.846212e-03   p_joint 1.287879e-05

Joint ci ratio: 9.239463e-01	ci left: 7.445977e-06	ci right 2.046507e-05	k: 17	n:1330000
Cons ci ratio: 4.869499e-02	ci left: 4.730777e-03	ci right 4.967628e-03	k: 6448	n:1330000
KS ci ratio: 1.787042e-01	ci left: 3.293391e-04	ci right 3.946734e-04	k: 480	n:1330000
SF3B2   1330000 perm   939 sec   (1416 perm/sec)   p_kst 3.609023e-04   p_cons 4.848120e-03   p_joint 1.278195e-05

Joint ci ratio: 9.239463e-01	ci left: 7.390410e-06	ci right 2.031235e-05	k: 17	n:1340000
Cons ci ratio: 4.850728e-02	ci left: 4.732333e-03	ci right 4.968323e-03	k: 6498	n:1340000
KS ci ratio: 1.783340e-01	ci left: 3.283071e-04	ci right 3.932873e-04	k: 482	n:1340000
SF3B2   1340000 perm   953 sec   (1406 perm/sec)   p_kst 3.597015e-04   p_cons 4.849254e-03   p_joint 1.268657e-05

Joint ci ratio: 9.239464e-01	ci left: 7.335666e-06	ci right 2.016188e-05	k: 17	n:1350000
Cons ci ratio: 4.834770e-02	ci left: 4.728744e-03	ci right 4.963758e-03	k: 6541	n:1350000
KS ci ratio: 1.777827e-01	ci left: 3.279984e-04	ci right 3.926952e-04	k: 485	n:1350000
SF3B2   1350000 perm   966 sec   (1398 perm/sec)   p_kst 3.592593e-04   p_cons 4.845185e-03   p_joint 1.259259e-05

Joint ci ratio: 9.239464e-01	ci left: 7.281727e-06	ci right 2.001364e-05	k: 17	n:1360000
Cons ci ratio: 4.814195e-02	ci left: 4.734654e-03	ci right 4.968933e-03	k: 6597	n:1360000
KS ci ratio: 1.770556e-01	ci left: 3.283972e-04	ci right 3.928794e-04	k: 489	n:1360000
SF3B2   1360000 perm   978 sec   (1391 perm/sec)   p_kst 3.595588e-04   p_cons 4.850735e-03   p_joint 1.250000e-05

Joint ci ratio: 9.239465e-01	ci left: 7.228576e-06	ci right 1.986755e-05	k: 17	n:1370000
Cons ci ratio: 4.796055e-02	ci left: 4.736153e-03	ci right 4.969598e-03	k: 6647	n:1370000
KS ci ratio: 1.765161e-01	ci left: 3.280930e-04	ci right 3.922983e-04	k: 492	n:1370000
SF3B2   1370000 perm   991 sec   (1383 perm/sec)   p_kst 3.591241e-04   p_cons 4.851825e-03   p_joint 1.240876e-05

Joint ci ratio: 9.239465e-01	ci left: 7.176194e-06	ci right 1.972358e-05	k: 17	n:1380000
Cons ci ratio: 4.774537e-02	ci left: 4.744791e-03	ci right 4.977584e-03	k: 6707	n:1380000
KS ci ratio: 1.752759e-01	ci left: 3.305647e-04	ci right 3.947510e-04	k: 499	n:1380000
SF3B2   1380000 perm   1003 sec   (1376 perm/sec)   p_kst 3.615942e-04   p_cons 4.860145e-03   p_joint 1.231884e-05

Joint ci ratio: 8.765320e-01	ci left: 8.229689e-06	ci right 2.134586e-05	k: 19	n:1390000
Cons ci ratio: 4.752249e-02	ci left: 4.755441e-03	ci right 4.987637e-03	k: 6770	n:1390000
KS ci ratio: 1.744060e-01	ci left: 3.316263e-04	ci right 3.956655e-04	k: 504	n:1390000
SF3B2   1390000 perm   1016 sec   (1369 perm/sec)   p_kst 3.625899e-04   p_cons 4.870504e-03   p_joint 1.366906e-05

Joint ci ratio: 8.765321e-01	ci left: 8.170906e-06	ci right 2.119339e-05	k: 19	n:1400000
Cons ci ratio: 4.735843e-02	ci left: 4.754646e-03	ci right 4.985981e-03	k: 6817	n:1400000
KS ci ratio: 1.735488e-01	ci left: 3.326735e-04	ci right 3.965660e-04	k: 509	n:1400000
SF3B2   1400000 perm   1028 sec   (1362 perm/sec)   p_kst 3.635714e-04   p_cons 4.869286e-03   p_joint 1.357143e-05

Joint ci ratio: 8.765321e-01	ci left: 8.112956e-06	ci right 2.104308e-05	k: 19	n:1410000
Cons ci ratio: 4.720989e-02	ci left: 4.751061e-03	ci right 4.981476e-03	k: 6860	n:1410000
KS ci ratio: 1.722032e-01	ci left: 3.357424e-04	ci right 3.996725e-04	k: 517	n:1410000
SF3B2   1410000 perm   1041 sec   (1355 perm/sec)   p_kst 3.666667e-04   p_cons 4.865248e-03   p_joint 1.347518e-05

Joint ci ratio: 8.765322e-01	ci left: 8.055822e-06	ci right 2.089489e-05	k: 19	n:1420000
Cons ci ratio: 4.700462e-02	ci left: 4.759359e-03	ci right 4.989146e-03	k: 6920	n:1420000
KS ci ratio: 1.713780e-01	ci left: 3.367478e-04	ci right 4.005302e-04	k: 522	n:1420000
SF3B2   1420000 perm   1054 sec   (1347 perm/sec)   p_kst 3.676056e-04   p_cons 4.873239e-03   p_joint 1.338028e-05

Joint ci ratio: 8.765322e-01	ci left: 7.999488e-06	ci right 2.074877e-05	k: 19	n:1430000
Cons ci ratio: 4.683235e-02	ci left: 4.761323e-03	ci right 4.990339e-03	k: 6971	n:1430000
KS ci ratio: 1.705645e-01	ci left: 3.377398e-04	ci right 4.013753e-04	k: 527	n:1430000
SF3B2   1430000 perm   1067 sec   (1341 perm/sec)   p_kst 3.685315e-04   p_cons 4.874825e-03   p_joint 1.328671e-05

Joint ci ratio: 8.554076e-01	ci left: 8.483714e-06	ci right 2.145018e-05	k: 20	n:1440000
Cons ci ratio: 4.663861e-02	ci left: 4.768066e-03	ci right 4.996432e-03	k: 7029	n:1440000
KS ci ratio: 1.692866e-01	ci left: 3.407137e-04	ci right 4.043795e-04	k: 535	n:1440000
SF3B2   1440000 perm   1080 sec   (1334 perm/sec)   p_kst 3.715278e-04   p_cons 4.881250e-03   p_joint 1.388889e-05

Joint ci ratio: 8.554076e-01	ci left: 8.425206e-06	ci right 2.130225e-05	k: 20	n:1450000
Cons ci ratio: 4.647031e-02	ci left: 4.769946e-03	ci right 4.997556e-03	k: 7080	n:1450000
KS ci ratio: 1.688149e-01	ci left: 3.403454e-04	ci right 4.037471e-04	k: 538	n:1450000
SF3B2   1450000 perm   1093 sec   (1327 perm/sec)   p_kst 3.710345e-04   p_cons 4.882759e-03   p_joint 1.379310e-05

Joint ci ratio: 8.554077e-01	ci left: 8.367499e-06	ci right 2.115634e-05	k: 20	n:1460000
Cons ci ratio: 4.633648e-02	ci left: 4.765031e-03	ci right 4.991734e-03	k: 7121	n:1460000
KS ci ratio: 1.685027e-01	ci left: 3.393263e-04	ci right 4.024094e-04	k: 540	n:1460000
SF3B2   1460000 perm   1106 sec   (1320 perm/sec)   p_kst 3.698630e-04   p_cons 4.877397e-03   p_joint 1.369863e-05

Joint ci ratio: 8.554077e-01	ci left: 8.310577e-06	ci right 2.101242e-05	k: 20	n:1470000
Cons ci ratio: 4.619732e-02	ci left: 4.761529e-03	ci right 4.987367e-03	k: 7164	n:1470000
KS ci ratio: 1.675759e-01	ci left: 3.409279e-04	ci right 4.039250e-04	k: 546	n:1470000
SF3B2   1470000 perm   1119 sec   (1314 perm/sec)   p_kst 3.714286e-04   p_cons 4.873469e-03   p_joint 1.360544e-05

Joint ci ratio: 8.554078e-01	ci left: 8.254424e-06	ci right 2.087045e-05	k: 20	n:1480000
Cons ci ratio: 4.603375e-02	ci left: 4.763419e-03	ci right 4.988525e-03	k: 7215	n:1480000
KS ci ratio: 1.668151e-01	ci left: 3.418614e-04	ci right 4.047154e-04	k: 551	n:1480000
SF3B2   1480000 perm   1132 sec   (1307 perm/sec)   p_kst 3.722973e-04   p_cons 4.875000e-03   p_joint 1.351351e-05

Joint ci ratio: 8.357404e-01	ci left: 8.724404e-06	ci right 2.154403e-05	k: 21	n:1490000
Cons ci ratio: 4.587824e-02	ci left: 4.763958e-03	ci right 4.988309e-03	k: 7264	n:1490000
KS ci ratio: 1.660646e-01	ci left: 3.427830e-04	ci right 4.054945e-04	k: 556	n:1490000
SF3B2   1490000 perm   1146 sec   (1301 perm/sec)   p_kst 3.731544e-04   p_cons 4.875168e-03   p_joint 1.409396e-05

Joint ci ratio: 8.357404e-01	ci left: 8.666241e-06	ci right 2.140041e-05	k: 21	n:1500000
Cons ci ratio: 4.571174e-02	ci left: 4.767127e-03	ci right 4.990791e-03	k: 7317	n:1500000
KS ci ratio: 1.653242e-01	ci left: 3.436929e-04	ci right 4.062626e-04	k: 561	n:1500000
SF3B2   1500000 perm   1159 sec   (1294 perm/sec)   p_kst 3.740000e-04   p_cons 4.878000e-03   p_joint 1.400000e-05

Joint ci ratio: 8.357404e-01	ci left: 8.608848e-06	ci right 2.125868e-05	k: 21	n:1510000
Cons ci ratio: 4.555635e-02	ci left: 4.768291e-03	ci right 4.991230e-03	k: 7367	n:1510000
KS ci ratio: 1.644486e-01	ci left: 3.452263e-04	ci right 4.077094e-04	k: 567	n:1510000
SF3B2   1510000 perm   1172 sec   (1288 perm/sec)   p_kst 3.754967e-04   p_cons 4.878808e-03   p_joint 1.390728e-05

Joint ci ratio: 8.357405e-01	ci left: 8.552211e-06	ci right 2.111882e-05	k: 21	n:1520000
Cons ci ratio: 4.537182e-02	ci left: 4.775946e-03	ci right 4.998315e-03	k: 7427	n:1520000
KS ci ratio: 1.638725e-01	ci left: 3.454786e-04	ci right 4.077667e-04	k: 571	n:1520000
SF3B2   1520000 perm   1186 sec   (1282 perm/sec)   p_kst 3.756579e-04   p_cons 4.886184e-03   p_joint 1.381579e-05

Joint ci ratio: 8.173701e-01	ci left: 9.011317e-06	ci right 2.177003e-05	k: 22	n:1530000
Cons ci ratio: 4.525028e-02	ci left: 4.770578e-03	ci right 4.992087e-03	k: 7467	n:1530000
KS ci ratio: 1.631609e-01	ci left: 3.463548e-04	ci right 4.085031e-04	k: 576	n:1530000
SF3B2   1530000 perm   1200 sec   (1275 perm/sec)   p_kst 3.764706e-04   p_cons 4.880392e-03   p_joint 1.437908e-05

Joint ci ratio: 8.173701e-01	ci left: 8.952802e-06	ci right 2.162866e-05	k: 22	n:1540000
Cons ci ratio: 4.508749e-02	ci left: 4.774270e-03	ci right 4.995131e-03	k: 7521	n:1540000
KS ci ratio: 1.624585e-01	ci left: 3.472202e-04	ci right 4.092294e-04	k: 581	n:1540000
SF3B2   1540000 perm   1213 sec   (1269 perm/sec)   p_kst 3.772727e-04   p_cons 4.883766e-03   p_joint 1.428571e-05

Joint ci ratio: 8.173702e-01	ci left: 8.895042e-06	ci right 2.148912e-05	k: 22	n:1550000
Cons ci ratio: 4.494731e-02	ci left: 4.773449e-03	ci right 4.993568e-03	k: 7568	n:1550000
KS ci ratio: 1.620414e-01	ci left: 3.468370e-04	ci right 4.086033e-04	k: 584	n:1550000
SF3B2   1550000 perm   1227 sec   (1263 perm/sec)   p_kst 3.767742e-04   p_cons 4.882581e-03   p_joint 1.419355e-05

Joint ci ratio: 8.173702e-01	ci left: 8.838022e-06	ci right 2.135137e-05	k: 22	n:1560000
Cons ci ratio: 4.479957e-02	ci left: 4.774542e-03	ci right 4.993969e-03	k: 7618	n:1560000
KS ci ratio: 1.614902e-01	ci left: 3.470740e-04	ci right 4.086518e-04	k: 588	n:1560000
SF3B2   1560000 perm   1241 sec   (1257 perm/sec)   p_kst 3.769231e-04   p_cons 4.883333e-03   p_joint 1.410256e-05

Joint ci ratio: 8.173703e-01	ci left: 8.781729e-06	ci right 2.121538e-05	k: 22	n:1570000
Cons ci ratio: 4.464157e-02	ci left: 4.778141e-03	ci right 4.996940e-03	k: 7672	n:1570000
KS ci ratio: 1.609447e-01	ci left: 3.473083e-04	ci right 4.086994e-04	k: 592	n:1570000
SF3B2   1570000 perm   1255 sec   (1251 perm/sec)   p_kst 3.770701e-04   p_cons 4.886624e-03   p_joint 1.401274e-05

Joint ci ratio: 8.173703e-01	ci left: 8.726148e-06	ci right 2.108110e-05	k: 22	n:1580000
Cons ci ratio: 4.447367e-02	ci left: 4.784200e-03	ci right 5.002431e-03	k: 7730	n:1580000
KS ci ratio: 1.606740e-01	ci left: 3.463250e-04	ci right 4.074294e-04	k: 594	n:1580000
SF3B2   1580000 perm   1269 sec   (1245 perm/sec)   p_kst 3.759494e-04   p_cons 4.892405e-03   p_joint 1.392405e-05

Joint ci ratio: 8.173703e-01	ci left: 8.671267e-06	ci right 2.094852e-05	k: 22	n:1590000
Cons ci ratio: 4.433912e-02	ci left: 4.783342e-03	ci right 5.000857e-03	k: 7777	n:1590000
KS ci ratio: 1.602705e-01	ci left: 3.459579e-04	ci right 4.068295e-04	k: 597	n:1590000
SF3B2   1590000 perm   1283 sec   (1239 perm/sec)   p_kst 3.754717e-04   p_cons 4.891195e-03   p_joint 1.383648e-05

Joint ci ratio: 8.173704e-01	ci left: 8.617071e-06	ci right 2.081759e-05	k: 22	n:1600000
Cons ci ratio: 4.421431e-02	ci left: 4.780642e-03	ci right 4.997406e-03	k: 7821	n:1600000
KS ci ratio: 1.598701e-01	ci left: 3.455956e-04	ci right 4.062369e-04	k: 600	n:1600000
SF3B2   1600000 perm   1298 sec   (1233 perm/sec)   p_kst 3.750000e-04   p_cons 4.888125e-03   p_joint 1.375000e-05

Joint ci ratio: 8.173704e-01	ci left: 8.563549e-06	ci right 2.068829e-05	k: 22	n:1610000
Cons ci ratio: 4.407084e-02	ci left: 4.782276e-03	ci right 4.998393e-03	k: 7872	n:1610000
KS ci ratio: 1.593407e-01	ci left: 3.458343e-04	ci right 4.062973e-04	k: 604	n:1610000
SF3B2   1610000 perm   1312 sec   (1227 perm/sec)   p_kst 3.751553e-04   p_cons 4.889441e-03   p_joint 1.366460e-05

Joint ci ratio: 8.173704e-01	ci left: 8.510687e-06	ci right 2.056059e-05	k: 22	n:1620000
Cons ci ratio: 4.394269e-02	ci left: 4.780838e-03	ci right 4.996246e-03	k: 7918	n:1620000
KS ci ratio: 1.586862e-01	ci left: 3.466631e-04	ci right 4.069984e-04	k: 609	n:1620000
SF3B2   1620000 perm   1326 sec   (1221 perm/sec)   p_kst 3.759259e-04   p_cons 4.887654e-03   p_joint 1.358025e-05

Joint ci ratio: 8.173705e-01	ci left: 8.458474e-06	ci right 2.043445e-05	k: 22	n:1630000
Cons ci ratio: 4.379080e-02	ci left: 4.784880e-03	ci right 4.999707e-03	k: 7973	n:1630000
KS ci ratio: 1.582975e-01	ci left: 3.463038e-04	ci right 4.064149e-04	k: 612	n:1630000
SF3B2   1630000 perm   1342 sec   (1215 perm/sec)   p_kst 3.754601e-04   p_cons 4.891411e-03   p_joint 1.349693e-05

Joint ci ratio: 8.173705e-01	ci left: 8.406898e-06	ci right 2.030985e-05	k: 22	n:1640000
Cons ci ratio: 4.365141e-02	ci left: 4.786462e-03	ci right 5.000658e-03	k: 8024	n:1640000
KS ci ratio: 1.576558e-01	ci left: 3.471205e-04	ci right 4.071059e-04	k: 617	n:1640000
SF3B2   1640000 perm   1356 sec   (1209 perm/sec)   p_kst 3.762195e-04   p_cons 4.892683e-03   p_joint 1.341463e-05

Joint ci ratio: 8.173706e-01	ci left: 8.355947e-06	ci right 2.018676e-05	k: 22	n:1650000
Cons ci ratio: 4.351875e-02	ci left: 4.786827e-03	ci right 5.000371e-03	k: 8073	n:1650000
KS ci ratio: 1.568959e-01	ci left: 3.485100e-04	ci right 4.084180e-04	k: 623	n:1650000
SF3B2   1650000 perm   1371 sec   (1204 perm/sec)   p_kst 3.775758e-04   p_cons 4.892727e-03   p_joint 1.333333e-05

Joint ci ratio: 8.173706e-01	ci left: 8.305610e-06	ci right 2.006515e-05	k: 22	n:1660000
Cons ci ratio: 4.337388e-02	ci left: 4.790167e-03	ci right 5.003132e-03	k: 8127	n:1660000
KS ci ratio: 1.562710e-01	ci left: 3.493046e-04	ci right 4.090876e-04	k: 628	n:1660000
SF3B2   1660000 perm   1385 sec   (1198 perm/sec)   p_kst 3.783133e-04   p_cons 4.895783e-03   p_joint 1.325301e-05

Joint ci ratio: 8.173706e-01	ci left: 8.255876e-06	ci right 1.994500e-05	k: 22	n:1670000
Cons ci ratio: 4.324107e-02	ci left: 4.791100e-03	ci right 5.003437e-03	k: 8177	n:1670000
KS ci ratio: 1.555308e-01	ci left: 3.506656e-04	ci right 4.103708e-04	k: 634	n:1670000
SF3B2   1670000 perm   1400 sec   (1193 perm/sec)   p_kst 3.796407e-04   p_cons 4.896407e-03   p_joint 1.317365e-05

Joint ci ratio: 8.173707e-01	ci left: 8.206734e-06	ci right 1.982628e-05	k: 22	n:1680000
Cons ci ratio: 4.312527e-02	ci left: 4.788489e-03	ci right 5.000128e-03	k: 8221	n:1680000
KS ci ratio: 1.551648e-01	ci left: 3.502946e-04	ci right 4.097832e-04	k: 637	n:1680000
SF3B2   1680000 perm   1415 sec   (1188 perm/sec)   p_kst 3.791667e-04   p_cons 4.893452e-03   p_joint 1.309524e-05

Joint ci ratio: 8.173707e-01	ci left: 8.158173e-06	ci right 1.970897e-05	k: 22	n:1690000
Cons ci ratio: 4.298168e-02	ci left: 4.792349e-03	ci right 5.003436e-03	k: 8276	n:1690000
KS ci ratio: 1.546806e-01	ci left: 3.504970e-04	ci right 4.098170e-04	k: 641	n:1690000
SF3B2   1690000 perm   1429 sec   (1182 perm/sec)   p_kst 3.792899e-04   p_cons 4.897041e-03   p_joint 1.301775e-05

Joint ci ratio: 8.173707e-01	ci left: 8.110184e-06	ci right 1.959303e-05	k: 22	n:1700000
Cons ci ratio: 4.280853e-02	ci left: 4.803148e-03	ci right 5.013838e-03	k: 8343	n:1700000
KS ci ratio: 1.543205e-01	ci left: 3.501317e-04	ci right 4.092392e-04	k: 644	n:1700000
SF3B2   1700000 perm   1444 sec   (1177 perm/sec)   p_kst 3.788235e-04   p_cons 4.907647e-03   p_joint 1.294118e-05

Joint ci ratio: 8.001608e-01	ci left: 8.526350e-06	ci right 2.018197e-05	k: 23	n:1710000
Cons ci ratio: 4.268595e-02	ci left: 4.802830e-03	ci right 5.012888e-03	k: 8391	n:1710000
KS ci ratio: 1.540819e-01	ci left: 3.492086e-04	ci right 4.080607e-04	k: 646	n:1710000
SF3B2   1710000 perm   1459 sec   (1172 perm/sec)   p_kst 3.777778e-04   p_cons 4.907018e-03   p_joint 1.345029e-05

Joint ci ratio: 8.001608e-01	ci left: 8.476778e-06	ci right 2.006464e-05	k: 23	n:1720000
Cons ci ratio: 4.257962e-02	ci left: 4.799064e-03	ci right 5.008422e-03	k: 8433	n:1720000
KS ci ratio: 1.539631e-01	ci left: 3.477373e-04	ci right 4.062920e-04	k: 647	n:1720000
SF3B2   1720000 perm   1475 sec   (1166 perm/sec)   p_kst 3.761628e-04   p_cons 4.902907e-03   p_joint 1.337209e-05

Joint ci ratio: 7.839941e-01	ci left: 8.888605e-06	ci right 2.064161e-05	k: 24	n:1730000
Cons ci ratio: 4.244892e-02	ci left: 4.801062e-03	ci right 5.009849e-03	k: 8485	n:1730000
KS ci ratio: 1.534901e-01	ci left: 3.479504e-04	ci right 4.063445e-04	k: 651	n:1730000
SF3B2   1730000 perm   1490 sec   (1161 perm/sec)   p_kst 3.763006e-04   p_cons 4.904624e-03   p_joint 1.387283e-05

Joint ci ratio: 7.839941e-01	ci left: 8.837521e-06	ci right 2.052298e-05	k: 24	n:1740000
Cons ci ratio: 4.232440e-02	ci left: 4.801901e-03	ci right 5.010097e-03	k: 8535	n:1740000
KS ci ratio: 1.534902e-01	ci left: 3.459507e-04	ci right 4.040093e-04	k: 651	n:1740000
SF3B2   1740000 perm   1505 sec   (1156 perm/sec)   p_kst 3.741379e-04   p_cons 4.905172e-03   p_joint 1.379310e-05

Joint ci ratio: 7.839942e-01	ci left: 8.787021e-06	ci right 2.040570e-05	k: 24	n:1750000
Cons ci ratio: 4.225046e-02	ci left: 4.791423e-03	ci right 4.998792e-03	k: 8565	n:1750000
KS ci ratio: 1.530216e-01	ci left: 3.461719e-04	ci right 4.040739e-04	k: 655	n:1750000
SF3B2   1750000 perm   1521 sec   (1151 perm/sec)   p_kst 3.742857e-04   p_cons 4.894286e-03   p_joint 1.371429e-05

Joint ci ratio: 7.839942e-01	ci left: 8.737094e-06	ci right 2.028976e-05	k: 24	n:1760000
Cons ci ratio: 4.212030e-02	ci left: 4.793995e-03	ci right 5.000821e-03	k: 8618	n:1760000
KS ci ratio: 1.526729e-01	ci left: 3.458444e-04	ci right 4.035477e-04	k: 658	n:1760000
SF3B2   1760000 perm   1536 sec   (1146 perm/sec)   p_kst 3.738636e-04   p_cons 4.896591e-03   p_joint 1.363636e-05

Joint ci ratio: 7.687694e-01	ci left: 9.140518e-06	ci right 2.085017e-05	k: 25	n:1770000
Cons ci ratio: 4.200595e-02	ci left: 4.793185e-03	ci right 4.999401e-03	k: 8665	n:1770000
KS ci ratio: 1.520969e-01	ci left: 3.466076e-04	ci right 4.042003e-04	k: 663	n:1770000
SF3B2   1770000 perm   1552 sec   (1141 perm/sec)   p_kst 3.745763e-04   p_cons 4.895480e-03   p_joint 1.412429e-05

Joint ci ratio: 7.687694e-01	ci left: 9.089167e-06	ci right 2.073304e-05	k: 25	n:1780000
Cons ci ratio: 4.186839e-02	ci left: 4.797944e-03	ci right 5.003672e-03	k: 8722	n:1780000
KS ci ratio: 1.516408e-01	ci left: 3.468222e-04	ci right 4.042620e-04	k: 667	n:1780000
SF3B2   1780000 perm   1567 sec   (1136 perm/sec)   p_kst 3.747191e-04   p_cons 4.900000e-03   p_joint 1.404494e-05

Joint ci ratio: 7.687695e-01	ci left: 9.038389e-06	ci right 2.061721e-05	k: 25	n:1790000
Cons ci ratio: 4.171546e-02	ci left: 4.806521e-03	ci right 5.011846e-03	k: 8786	n:1790000
KS ci ratio: 1.509643e-01	ci left: 3.481097e-04	ci right 4.054823e-04	k: 673	n:1790000
SF3B2   1790000 perm   1583 sec   (1131 perm/sec)   p_kst 3.759777e-04   p_cons 4.908380e-03   p_joint 1.396648e-05

Joint ci ratio: 7.687695e-01	ci left: 8.988176e-06	ci right 2.050267e-05	k: 25	n:1800000
Cons ci ratio: 4.159254e-02	ci left: 4.808406e-03	ci right 5.013192e-03	k: 8838	n:1800000
KS ci ratio: 1.504074e-01	ci left: 3.488488e-04	ci right 4.061121e-04	k: 678	n:1800000
SF3B2   1800000 perm   1598 sec   (1126 perm/sec)   p_kst 3.766667e-04   p_cons 4.910000e-03   p_joint 1.388889e-05

Joint ci ratio: 7.687695e-01	ci left: 8.938518e-06	ci right 2.038940e-05	k: 25	n:1810000
Cons ci ratio: 4.150355e-02	ci left: 4.802616e-03	ci right 5.006708e-03	k: 8876	n:1810000
KS ci ratio: 1.502969e-01	ci left: 3.474531e-04	ci right 4.044416e-04	k: 679	n:1810000
SF3B2   1810000 perm   1614 sec   (1122 perm/sec)   p_kst 3.751381e-04   p_cons 4.903867e-03   p_joint 1.381215e-05

Joint ci ratio: 7.687695e-01	ci left: 8.889405e-06	ci right 2.027737e-05	k: 25	n:1820000
Cons ci ratio: 4.140113e-02	ci left: 4.800153e-03	ci right 5.003625e-03	k: 8920	n:1820000
KS ci ratio: 1.499664e-01	ci left: 3.471305e-04	ci right 4.039296e-04	k: 682	n:1820000
SF3B2   1820000 perm   1629 sec   (1117 perm/sec)   p_kst 3.747253e-04   p_cons 4.901099e-03   p_joint 1.373626e-05

Joint ci ratio: 7.687696e-01	ci left: 8.840829e-06	ci right 2.016656e-05	k: 25	n:1830000
Cons ci ratio: 4.129021e-02	ci left: 4.799881e-03	ci right 5.002783e-03	k: 8968	n:1830000
KS ci ratio: 1.496382e-01	ci left: 3.468115e-04	ci right 4.034231e-04	k: 685	n:1830000
SF3B2   1830000 perm   1644 sec   (1113 perm/sec)   p_kst 3.743169e-04   p_cons 4.900546e-03   p_joint 1.366120e-05

Joint ci ratio: 7.543986e-01	ci left: 9.230489e-06	ci right 2.070429e-05	k: 26	n:1840000
Cons ci ratio: 4.117788e-02	ci left: 4.800151e-03	ci right 5.002499e-03	k: 9017	n:1840000
KS ci ratio: 1.492038e-01	ci left: 3.470193e-04	ci right 4.034857e-04	k: 689	n:1840000
SF3B2   1840000 perm   1660 sec   (1108 perm/sec)   p_kst 3.744565e-04   p_cons 4.900543e-03   p_joint 1.413043e-05

Joint ci ratio: 7.543986e-01	ci left: 9.180595e-06	ci right 2.059238e-05	k: 26	n:1850000
Cons ci ratio: 4.105281e-02	ci left: 4.803628e-03	ci right 5.005494e-03	k: 9072	n:1850000
KS ci ratio: 1.485592e-01	ci left: 3.482659e-04	ci right 4.046687e-04	k: 695	n:1850000
SF3B2   1850000 perm   1676 sec   (1104 perm/sec)   p_kst 3.756757e-04   p_cons 4.903784e-03   p_joint 1.405405e-05

Joint ci ratio: 7.543987e-01	ci left: 9.131236e-06	ci right 2.048167e-05	k: 26	n:1860000
Cons ci ratio: 4.094015e-02	ci left: 4.804409e-03	ci right 5.005740e-03	k: 9122	n:1860000
KS ci ratio: 1.482401e-01	ci left: 3.479466e-04	ci right 4.041658e-04	k: 698	n:1860000
SF3B2   1860000 perm   1693 sec   (1099 perm/sec)   p_kst 3.752688e-04   p_cons 4.904301e-03   p_joint 1.397849e-05

Joint ci ratio: 7.543987e-01	ci left: 9.082406e-06	ci right 2.037214e-05	k: 26	n:1870000
Cons ci ratio: 4.079713e-02	ci left: 4.812592e-03	ci right 5.013545e-03	k: 9186	n:1870000
KS ci ratio: 1.478178e-01	ci left: 3.481457e-04	ci right 4.042227e-04	k: 702	n:1870000
SF3B2   1870000 perm   1709 sec   (1094 perm/sec)   p_kst 3.754011e-04   p_cons 4.912299e-03   p_joint 1.390374e-05

Joint ci ratio: 7.543987e-01	ci left: 9.034095e-06	ci right 2.026378e-05	k: 26	n:1880000
Cons ci ratio: 4.067107e-02	ci left: 4.817004e-03	ci right 5.017505e-03	k: 9243	n:1880000
KS ci ratio: 1.478179e-01	ci left: 3.462938e-04	ci right 4.020726e-04	k: 702	n:1880000
SF3B2   1880000 perm   1726 sec   (1089 perm/sec)   p_kst 3.734043e-04   p_cons 4.916489e-03   p_joint 1.382979e-05

Joint ci ratio: 7.408047e-01	ci left: 9.414396e-06	ci right 2.078490e-05	k: 27	n:1890000
Cons ci ratio: 4.054836e-02	ci left: 4.820846e-03	ci right 5.020888e-03	k: 9299	n:1890000
KS ci ratio: 1.469838e-01	ci left: 3.485383e-04	ci right 4.043340e-04	k: 710	n:1890000
SF3B2   1890000 perm   1743 sec   (1085 perm/sec)   p_kst 3.756614e-04   p_cons 4.920106e-03   p_joint 1.428571e-05

Joint ci ratio: 7.408047e-01	ci left: 9.364847e-06	ci right 2.067550e-05	k: 27	n:1900000
Cons ci ratio: 4.044631e-02	ci left: 4.819959e-03	ci right 5.019449e-03	k: 9346	n:1900000
KS ci ratio: 1.467776e-01	ci left: 3.477178e-04	ci right 4.032972e-04	k: 712	n:1900000
SF3B2   1900000 perm   1759 sec   (1080 perm/sec)   p_kst 3.747368e-04   p_cons 4.918947e-03   p_joint 1.421053e-05

Joint ci ratio: 7.408047e-01	ci left: 9.315816e-06	ci right 2.056725e-05	k: 27	n:1910000
Cons ci ratio: 4.032778e-02	ci left: 4.823229e-03	ci right 5.022256e-03	k: 9401	n:1910000
KS ci ratio: 1.467777e-01	ci left: 3.458973e-04	ci right 4.011858e-04	k: 712	n:1910000
SF3B2   1910000 perm   1776 sec   (1075 perm/sec)   p_kst 3.727749e-04   p_cons 4.921990e-03   p_joint 1.413613e-05

Joint ci ratio: 7.408048e-01	ci left: 9.267296e-06	ci right 2.046013e-05	k: 27	n:1920000
Cons ci ratio: 4.024450e-02	ci left: 4.818216e-03	ci right 5.016615e-03	k: 9440	n:1920000
KS ci ratio: 1.464699e-01	ci left: 3.456009e-04	ci right 4.007160e-04	k: 715	n:1920000
SF3B2   1920000 perm   1793 sec   (1071 perm/sec)   p_kst 3.723958e-04   p_cons 4.916667e-03   p_joint 1.406250e-05

Joint ci ratio: 7.279201e-01	ci left: 9.640330e-06	ci right 2.096770e-05	k: 28	n:1930000
Cons ci ratio: 4.014047e-02	ci left: 4.818384e-03	ci right 5.016266e-03	k: 9489	n:1930000
KS ci ratio: 1.458600e-01	ci left: 3.468054e-04	ci right 4.018622e-04	k: 721	n:1930000
SF3B2   1930000 perm   1810 sec   (1066 perm/sec)   p_kst 3.735751e-04   p_cons 4.916580e-03   p_joint 1.450777e-05

Joint ci ratio: 7.279201e-01	ci left: 9.590638e-06	ci right 2.085962e-05	k: 28	n:1940000
Cons ci ratio: 4.001196e-02	ci left: 4.824676e-03	ci right 5.022167e-03	k: 9550	n:1940000
KS ci ratio: 1.455579e-01	ci left: 3.465077e-04	ci right 4.013935e-04	k: 724	n:1940000
SF3B2   1940000 perm   1827 sec   (1062 perm/sec)   p_kst 3.731959e-04   p_cons 4.922680e-03   p_joint 1.443299e-05

Joint ci ratio: 7.279201e-01	ci left: 9.541455e-06	ci right 2.075265e-05	k: 28	n:1950000
Cons ci ratio: 3.990137e-02	ci left: 4.826842e-03	ci right 5.023864e-03	k: 9603	n:1950000
KS ci ratio: 1.453576e-01	ci left: 3.457191e-04	ci right 4.003980e-04	k: 726	n:1950000
SF3B2   1950000 perm   1844 sec   (1058 perm/sec)   p_kst 3.723077e-04   p_cons 4.924615e-03   p_joint 1.435897e-05

Joint ci ratio: 7.156851e-01	ci left: 9.909080e-06	ci right 2.124934e-05	k: 29	n:1960000
Cons ci ratio: 3.980204e-02	ci left: 4.826461e-03	ci right 5.022965e-03	k: 9651	n:1960000
KS ci ratio: 1.450587e-01	ci left: 3.454302e-04	ci right 3.999413e-04	k: 729	n:1960000
SF3B2   1960000 perm   1861 sec   (1053 perm/sec)   p_kst 3.719388e-04   p_cons 4.923980e-03   p_joint 1.479592e-05

Joint ci ratio: 7.156852e-01	ci left: 9.858780e-06	ci right 2.114147e-05	k: 29	n:1970000
Cons ci ratio: 3.971785e-02	ci left: 4.822566e-03	ci right 5.018487e-03	k: 9692	n:1970000
KS ci ratio: 1.446628e-01	ci left: 3.456336e-04	ci right 4.000152e-04	k: 733	n:1970000
SF3B2   1970000 perm   1878 sec   (1049 perm/sec)   p_kst 3.720812e-04   p_cons 4.919797e-03   p_joint 1.472081e-05

Joint ci ratio: 7.156852e-01	ci left: 9.808988e-06	ci right 2.103470e-05	k: 29	n:1980000
Cons ci ratio: 3.962807e-02	ci left: 4.820212e-03	ci right 5.015584e-03	k: 9736	n:1980000
KS ci ratio: 1.442703e-01	ci left: 3.458352e-04	ci right 4.000881e-04	k: 737	n:1980000
SF3B2   1980000 perm   1895 sec   (1045 perm/sec)   p_kst 3.722222e-04   p_cons 4.917172e-03   p_joint 1.464646e-05

Joint ci ratio: 7.156852e-01	ci left: 9.759697e-06	ci right 2.092900e-05	k: 29	n:1990000
Cons ci ratio: 3.952264e-02	ci left: 4.821862e-03	ci right 5.016769e-03	k: 9788	n:1990000
KS ci ratio: 1.440752e-01	ci left: 3.450661e-04	ci right 3.991188e-04	k: 739	n:1990000
SF3B2   1990000 perm   1912 sec   (1041 perm/sec)   p_kst 3.713568e-04   p_cons 4.918593e-03   p_joint 1.457286e-05

Joint ci ratio: 7.156853e-01	ci left: 9.710898e-06	ci right 2.082435e-05	k: 29	n:2000000
Cons ci ratio: 3.942007e-02	ci left: 4.823001e-03	ci right 5.017437e-03	k: 9839	n:2000000
KS ci ratio: 1.436874e-01	ci left: 3.452688e-04	ci right 3.991952e-04	k: 743	n:2000000
SF3B2   2000000 perm   1929 sec   (1037 perm/sec)   p_kst 3.715000e-04   p_cons 4.919500e-03   p_joint 1.450000e-05

Joint ci ratio: 7.156853e-01	ci left: 9.662585e-06	ci right 2.072075e-05	k: 29	n:2010000
Cons ci ratio: 3.928837e-02	ci left: 4.831519e-03	ci right 5.025633e-03	k: 9905	n:2010000
KS ci ratio: 1.433986e-01	ci left: 3.449899e-04	ci right 3.987553e-04	k: 746	n:2010000
SF3B2   2010000 perm   1946 sec   (1033 perm/sec)   p_kst 3.711443e-04   p_cons 4.927861e-03   p_joint 1.442786e-05

Joint ci ratio: 7.156853e-01	ci left: 9.614751e-06	ci right 2.061817e-05	k: 29	n:2020000
Cons ci ratio: 3.921730e-02	ci left: 4.825247e-03	ci right 5.018751e-03	k: 9941	n:2020000
KS ci ratio: 1.433987e-01	ci left: 3.432820e-04	ci right 3.967812e-04	k: 746	n:2020000
SF3B2   2020000 perm   1962 sec   (1029 perm/sec)   p_kst 3.693069e-04   p_cons 4.921287e-03   p_joint 1.435644e-05

Joint ci ratio: 7.156853e-01	ci left: 9.567387e-06	ci right 2.051660e-05	k: 29	n:2030000
Cons ci ratio: 3.913086e-02	ci left: 4.822940e-03	ci right 5.015915e-03	k: 9985	n:2030000
KS ci ratio: 1.433030e-01	ci left: 3.420659e-04	ci right 3.953369e-04	k: 747	n:2030000
SF3B2   2030000 perm   1980 sec   (1025 perm/sec)   p_kst 3.679803e-04   p_cons 4.918719e-03   p_joint 1.428571e-05

Joint ci ratio: 7.156854e-01	ci left: 9.520488e-06	ci right 2.041603e-05	k: 29	n:2040000
Cons ci ratio: 3.902934e-02	ci left: 4.824539e-03	ci right 5.017067e-03	k: 10037	n:2040000
KS ci ratio: 1.429213e-01	ci left: 3.422797e-04	ci right 3.954300e-04	k: 751	n:2040000
SF3B2   2040000 perm   1997 sec   (1021 perm/sec)   p_kst 3.681373e-04   p_cons 4.920098e-03   p_joint 1.421569e-05

Joint ci ratio: 7.156854e-01	ci left: 9.474047e-06	ci right 2.031644e-05	k: 29	n:2050000
Cons ci ratio: 3.893637e-02	ci left: 4.824191e-03	ci right 5.016236e-03	k: 10085	n:2050000
KS ci ratio: 1.423545e-01	ci left: 3.434324e-04	ci right 3.965322e-04	k: 757	n:2050000
SF3B2   2050000 perm   2014 sec   (1018 perm/sec)   p_kst 3.692683e-04   p_cons 4.919512e-03   p_joint 1.414634e-05

Joint ci ratio: 7.040473e-01	ci left: 9.825688e-06	ci right 2.078968e-05	k: 30	n:2060000
Cons ci ratio: 3.882482e-02	ci left: 4.828655e-03	ci right 5.020314e-03	k: 10143	n:2060000
KS ci ratio: 1.417015e-01	ci left: 3.450426e-04	ci right 3.981260e-04	k: 764	n:2060000
SF3B2   2060000 perm   2032 sec   (1014 perm/sec)   p_kst 3.708738e-04   p_cons 4.923786e-03   p_joint 1.456311e-05

Joint ci ratio: 6.929591e-01	ci left: 1.017538e-05	ci right 2.125695e-05	k: 31	n:2070000
Cons ci ratio: 3.873712e-02	ci left: 4.827334e-03	ci right 5.018499e-03	k: 10189	n:2070000
KS ci ratio: 1.408751e-01	ci left: 3.475699e-04	ci right 4.007041e-04	k: 773	n:2070000
SF3B2   2070000 perm   2049 sec   (1010 perm/sec)   p_kst 3.734300e-04   p_cons 4.922222e-03   p_joint 1.497585e-05

Joint ci ratio: 6.823788e-01	ci left: 1.052309e-05	ci right 2.171842e-05	k: 32	n:2080000
Cons ci ratio: 3.862915e-02	ci left: 4.831265e-03	ci right 5.022040e-03	k: 10246	n:2080000
KS ci ratio: 1.402423e-01	ci left: 3.491460e-04	ci right 4.022612e-04	k: 780	n:2080000
SF3B2   2080000 perm   2066 sec   (1007 perm/sec)   p_kst 3.750000e-04   p_cons 4.925962e-03   p_joint 1.538462e-05

Joint ci ratio: 6.823789e-01	ci left: 1.047274e-05	ci right 2.161450e-05	k: 32	n:2090000
Cons ci ratio: 3.855218e-02	ci left: 4.827577e-03	ci right 5.017818e-03	k: 10287	n:2090000
KS ci ratio: 1.400631e-01	ci left: 3.483988e-04	ci right 4.013270e-04	k: 782	n:2090000
SF3B2   2090000 perm   2084 sec   (1003 perm/sec)   p_kst 3.741627e-04   p_cons 4.922010e-03   p_joint 1.531100e-05

Joint ci ratio: 6.823789e-01	ci left: 1.042287e-05	ci right 2.151158e-05	k: 32	n:2100000
Cons ci ratio: 3.847379e-02	ci left: 4.824396e-03	ci right 5.014116e-03	k: 10329	n:2100000
KS ci ratio: 1.394411e-01	ci left: 3.499566e-04	ci right 4.028657e-04	k: 789	n:2100000
SF3B2   2100000 perm   2102 sec   (999 perm/sec)   p_kst 3.757143e-04   p_cons 4.918571e-03   p_joint 1.523810e-05

Joint ci ratio: 6.823789e-01	ci left: 1.037347e-05	ci right 2.140963e-05	k: 32	n:2110000
Cons ci ratio: 3.837915e-02	ci left: 4.825470e-03	ci right 5.014756e-03	k: 10380	n:2110000
KS ci ratio: 1.391771e-01	ci left: 3.496702e-04	ci right 4.024277e-04	k: 792	n:2110000
SF3B2   2110000 perm   2119 sec   (996 perm/sec)   p_kst 3.753555e-04   p_cons 4.919431e-03   p_joint 1.516588e-05

Joint ci ratio: 6.823789e-01	ci left: 1.032454e-05	ci right 2.130864e-05	k: 32	n:2120000
Cons ci ratio: 3.827231e-02	ci left: 4.829805e-03	ci right 5.018722e-03	k: 10438	n:2120000
KS ci ratio: 1.388274e-01	ci left: 3.498420e-04	ci right 4.024819e-04	k: 796	n:2120000
SF3B2   2120000 perm   2138 sec   (992 perm/sec)   p_kst 3.754717e-04   p_cons 4.923585e-03   p_joint 1.509434e-05

Joint ci ratio: 6.823790e-01	ci left: 1.027607e-05	ci right 2.120860e-05	k: 32	n:2130000
Cons ci ratio: 3.816817e-02	ci left: 4.833634e-03	ci right 5.022176e-03	k: 10495	n:2130000
KS ci ratio: 1.383939e-01	ci left: 3.504656e-04	ci right 4.030210e-04	k: 801	n:2130000
SF3B2   2130000 perm   2155 sec   (988 perm/sec)   p_kst 3.760563e-04   p_cons 4.927230e-03   p_joint 1.502347e-05

Joint ci ratio: 6.722690e-01	ci left: 1.061483e-05	ci right 2.165613e-05	k: 33	n:2140000
Cons ci ratio: 3.807758e-02	ci left: 4.834189e-03	ci right 5.022295e-03	k: 10545	n:2140000
KS ci ratio: 1.378790e-01	ci left: 3.515348e-04	ci right 4.040383e-04	k: 807	n:2140000
SF3B2   2140000 perm   2173 sec   (985 perm/sec)   p_kst 3.771028e-04   p_cons 4.927570e-03   p_joint 1.542056e-05

Joint ci ratio: 6.722690e-01	ci left: 1.056546e-05	ci right 2.155541e-05	k: 33	n:2150000
Cons ci ratio: 3.799123e-02	ci left: 4.833818e-03	ci right 5.021473e-03	k: 10593	n:2150000
KS ci ratio: 1.377088e-01	ci left: 3.507979e-04	ci right 4.031214e-04	k: 809	n:2150000
SF3B2   2150000 perm   2191 sec   (981 perm/sec)   p_kst 3.762791e-04   p_cons 4.926977e-03   p_joint 1.534884e-05

Joint ci ratio: 6.722690e-01	ci left: 1.051654e-05	ci right 2.145561e-05	k: 33	n:2160000
Cons ci ratio: 3.788579e-02	ci left: 4.838495e-03	ci right 5.025799e-03	k: 10652	n:2160000
KS ci ratio: 1.375391e-01	ci left: 3.500679e-04	ci right 4.022129e-04	k: 811	n:2160000
SF3B2   2160000 perm   2209 sec   (978 perm/sec)   p_kst 3.754630e-04   p_cons 4.931481e-03   p_joint 1.527778e-05

Joint ci ratio: 6.722690e-01	ci left: 1.046808e-05	ci right 2.135674e-05	k: 33	n:2170000
Cons ci ratio: 3.779897e-02	ci left: 4.838565e-03	ci right 5.025433e-03	k: 10701	n:2170000
KS ci ratio: 1.372016e-01	ci left: 3.502346e-04	ci right 4.022660e-04	k: 815	n:2170000
SF3B2   2170000 perm   2227 sec   (974 perm/sec)   p_kst 3.755760e-04   p_cons 4.931336e-03   p_joint 1.520737e-05

Joint ci ratio: 6.533278e-01	ci left: 1.118295e-05	ci right 2.232861e-05	k: 35	n:2180000
Cons ci ratio: 3.772155e-02	ci left: 4.836362e-03	ci right 5.022755e-03	k: 10745	n:2180000
KS ci ratio: 1.367831e-01	ci left: 3.508430e-04	ci right 4.027928e-04	k: 820	n:2180000
SF3B2   2180000 perm   2245 sec   (971 perm/sec)   p_kst 3.761468e-04   p_cons 4.928899e-03   p_joint 1.605505e-05

Joint ci ratio: 6.533278e-01	ci left: 1.113189e-05	ci right 2.222666e-05	k: 35	n:2190000
Cons ci ratio: 3.764460e-02	ci left: 4.834180e-03	ci right 5.020100e-03	k: 10789	n:2190000
KS ci ratio: 1.366169e-01	ci left: 3.501230e-04	ci right 4.018981e-04	k: 822	n:2190000
SF3B2   2190000 perm   2263 sec   (968 perm/sec)   p_kst 3.753425e-04   p_cons 4.926484e-03   p_joint 1.598174e-05

Joint ci ratio: 6.533278e-01	ci left: 1.108129e-05	ci right 2.212563e-05	k: 35	n:2200000
Cons ci ratio: 3.755768e-02	ci left: 4.834720e-03	ci right 5.020223e-03	k: 10839	n:2200000
KS ci ratio: 1.365341e-01	ci left: 3.489705e-04	ci right 4.005414e-04	k: 823	n:2200000
SF3B2   2200000 perm   2282 sec   (964 perm/sec)   p_kst 3.740909e-04   p_cons 4.926818e-03   p_joint 1.590909e-05

Joint ci ratio: 6.533279e-01	ci left: 1.103115e-05	ci right 2.202551e-05	k: 35	n:2210000
Cons ci ratio: 3.745580e-02	ci left: 4.839291e-03	ci right 5.024454e-03	k: 10898	n:2210000
KS ci ratio: 1.359577e-01	ci left: 3.504509e-04	ci right 4.020042e-04	k: 830	n:2210000
SF3B2   2210000 perm   2300 sec   (961 perm/sec)   p_kst 3.755656e-04   p_cons 4.931222e-03   p_joint 1.583710e-05

Joint ci ratio: 6.533279e-01	ci left: 1.098146e-05	ci right 2.192630e-05	k: 35	n:2220000
Cons ci ratio: 3.737361e-02	ci left: 4.838911e-03	ci right 5.023645e-03	k: 10946	n:2220000
KS ci ratio: 1.356316e-01	ci left: 3.506129e-04	ci right 4.020564e-04	k: 834	n:2220000
SF3B2   2220000 perm   2318 sec   (958 perm/sec)   p_kst 3.756757e-04   p_cons 4.930631e-03   p_joint 1.576577e-05

Joint ci ratio: 6.533279e-01	ci left: 1.093221e-05	ci right 2.182797e-05	k: 35	n:2230000
Cons ci ratio: 3.729195e-02	ci left: 4.838536e-03	ci right 5.022843e-03	k: 10994	n:2230000
KS ci ratio: 1.355506e-01	ci left: 3.494739e-04	ci right 4.007171e-04	k: 835	n:2230000
SF3B2   2230000 perm   2336 sec   (954 perm/sec)   p_kst 3.744395e-04   p_cons 4.930045e-03   p_joint 1.569507e-05

Joint ci ratio: 6.533279e-01	ci left: 1.088341e-05	ci right 2.173053e-05	k: 35	n:2240000
Cons ci ratio: 3.720067e-02	ci left: 4.840818e-03	ci right 5.024751e-03	k: 11048	n:2240000
KS ci ratio: 1.353888e-01	ci left: 3.487763e-04	ci right 3.998513e-04	k: 837	n:2240000
SF3B2   2240000 perm   2355 sec   (951 perm/sec)   p_kst 3.736607e-04   p_cons 4.932143e-03   p_joint 1.562500e-05

Joint ci ratio: 6.533280e-01	ci left: 1.083504e-05	ci right 2.163395e-05	k: 35	n:2250000
Cons ci ratio: 3.711006e-02	ci left: 4.843081e-03	ci right 5.026642e-03	k: 11102	n:2250000
KS ci ratio: 1.349866e-01	ci left: 3.493733e-04	ci right 4.003715e-04	k: 842	n:2250000
SF3B2   2250000 perm   2373 sec   (948 perm/sec)   p_kst 3.742222e-04   p_cons 4.934222e-03   p_joint 1.555556e-05

Joint ci ratio: 6.533280e-01	ci left: 1.078709e-05	ci right 2.153822e-05	k: 35	n:2260000
Cons ci ratio: 3.703679e-02	ci left: 4.840939e-03	ci right 5.024050e-03	k: 11146	n:2260000
KS ci ratio: 1.347471e-01	ci left: 3.491100e-04	ci right 3.999721e-04	k: 845	n:2260000
SF3B2   2260000 perm   2391 sec   (945 perm/sec)   p_kst 3.738938e-04   p_cons 4.931858e-03   p_joint 1.548673e-05

Joint ci ratio: 6.533280e-01	ci left: 1.073957e-05	ci right 2.144334e-05	k: 35	n:2270000
Cons ci ratio: 3.695399e-02	ci left: 4.841436e-03	ci right 5.024147e-03	k: 11196	n:2270000
KS ci ratio: 1.342718e-01	ci left: 3.501263e-04	ci right 4.009422e-04	k: 851	n:2270000
SF3B2   2270000 perm   2410 sec   (942 perm/sec)   p_kst 3.748899e-04   p_cons 4.932159e-03   p_joint 1.541850e-05

Joint ci ratio: 6.533280e-01	ci left: 1.069247e-05	ci right 2.134929e-05	k: 35	n:2280000
Cons ci ratio: 3.687340e-02	ci left: 4.841495e-03	ci right 5.023801e-03	k: 11245	n:2280000
KS ci ratio: 1.339577e-01	ci left: 3.502862e-04	ci right 4.009969e-04	k: 855	n:2280000
SF3B2   2280000 perm   2429 sec   (939 perm/sec)   p_kst 3.750000e-04   p_cons 4.932018e-03   p_joint 1.535088e-05

Joint ci ratio: 6.533281e-01	ci left: 1.064578e-05	ci right 2.125606e-05	k: 35	n:2290000
Cons ci ratio: 3.679170e-02	ci left: 4.841986e-03	ci right 5.023898e-03	k: 11295	n:2290000
KS ci ratio: 1.338796e-01	ci left: 3.491786e-04	ci right 3.996971e-04	k: 856	n:2290000
SF3B2   2290000 perm   2448 sec   (936 perm/sec)   p_kst 3.737991e-04   p_cons 4.932314e-03   p_joint 1.528384e-05

Joint ci ratio: 6.533281e-01	ci left: 1.059949e-05	ci right 2.116364e-05	k: 35	n:2300000
Cons ci ratio: 3.671216e-02	ci left: 4.842043e-03	ci right 5.023555e-03	k: 11344	n:2300000
KS ci ratio: 1.334907e-01	ci left: 3.497617e-04	ci right 4.002059e-04	k: 861	n:2300000
SF3B2   2300000 perm   2467 sec   (932 perm/sec)   p_kst 3.743478e-04   p_cons 4.932174e-03   p_joint 1.521739e-05

Joint ci ratio: 6.533281e-01	ci left: 1.055361e-05	ci right 2.107203e-05	k: 35	n:2310000
Cons ci ratio: 3.663960e-02	ci left: 4.840383e-03	ci right 5.021467e-03	k: 11389	n:2310000
KS ci ratio: 1.332590e-01	ci left: 3.495029e-04	ci right 3.998154e-04	k: 864	n:2310000
SF3B2   2310000 perm   2486 sec   (929 perm/sec)   p_kst 3.740260e-04   p_cons 4.930303e-03   p_joint 1.515152e-05

Joint ci ratio: 6.533281e-01	ci left: 1.050812e-05	ci right 2.098120e-05	k: 35	n:2320000
Cons ci ratio: 3.655623e-02	ci left: 4.841728e-03	ci right 5.022442e-03	k: 11441	n:2320000
KS ci ratio: 1.329520e-01	ci left: 3.496632e-04	ci right 3.998736e-04	k: 868	n:2320000
SF3B2   2320000 perm   2505 sec   (926 perm/sec)   p_kst 3.741379e-04   p_cons 4.931466e-03   p_joint 1.508621e-05

Joint ci ratio: 6.444388e-01	ci left: 1.082146e-05	ci right 2.139014e-05	k: 36	n:2330000
Cons ci ratio: 3.645590e-02	ci left: 4.847740e-03	ci right 5.028172e-03	k: 11504	n:2330000
KS ci ratio: 1.327993e-01	ci left: 3.489923e-04	ci right 3.990443e-04	k: 870	n:2330000
SF3B2   2330000 perm   2524 sec   (923 perm/sec)   p_kst 3.733906e-04   p_cons 4.937339e-03   p_joint 1.545064e-05

Joint ci ratio: 6.444388e-01	ci left: 1.077522e-05	ci right 2.129873e-05	k: 36	n:2340000
Cons ci ratio: 3.638643e-02	ci left: 4.845656e-03	ci right 5.025658e-03	k: 11548	n:2340000
KS ci ratio: 1.322687e-01	ci left: 3.503931e-04	ci right 4.004295e-04	k: 877	n:2340000
SF3B2   2340000 perm   2543 sec   (920 perm/sec)   p_kst 3.747863e-04   p_cons 4.935043e-03   p_joint 1.538462e-05

Joint ci ratio: 6.444388e-01	ci left: 1.072937e-05	ci right 2.120810e-05	k: 36	n:2350000
Cons ci ratio: 3.632680e-02	ci left: 4.841059e-03	ci right 5.020590e-03	k: 11586	n:2350000
KS ci ratio: 1.319685e-01	ci left: 3.505480e-04	ci right 4.004839e-04	k: 881	n:2350000
SF3B2   2350000 perm   2563 sec   (917 perm/sec)   p_kst 3.748936e-04   p_cons 4.930213e-03   p_joint 1.531915e-05

Joint ci ratio: 6.444388e-01	ci left: 1.068390e-05	ci right 2.111823e-05	k: 36	n:2360000
Cons ci ratio: 3.625180e-02	ci left: 4.840700e-03	ci right 5.019840e-03	k: 11634	n:2360000
KS ci ratio: 1.318938e-01	ci left: 3.494723e-04	ci right 3.992247e-04	k: 882	n:2360000
SF3B2   2360000 perm   2582 sec   (914 perm/sec)   p_kst 3.737288e-04   p_cons 4.929661e-03   p_joint 1.525424e-05

Joint ci ratio: 6.444389e-01	ci left: 1.063882e-05	ci right 2.102913e-05	k: 36	n:2370000
Cons ci ratio: 3.616949e-02	ci left: 4.842436e-03	ci right 5.021224e-03	k: 11687	n:2370000
KS ci ratio: 1.317447e-01	ci left: 3.488138e-04	ci right 3.984119e-04	k: 884	n:2370000
SF3B2   2370000 perm   2601 sec   (911 perm/sec)   p_kst 3.729958e-04   p_cons 4.931224e-03   p_joint 1.518987e-05

Joint ci ratio: 6.444389e-01	ci left: 1.059412e-05	ci right 2.094077e-05	k: 36	n:2380000
Cons ci ratio: 3.608001e-02	ci left: 4.846239e-03	ci right 5.024716e-03	k: 11745	n:2380000
KS ci ratio: 1.312267e-01	ci left: 3.501927e-04	ci right 3.997757e-04	k: 891	n:2380000
SF3B2   2380000 perm   2621 sec   (908 perm/sec)   p_kst 3.743697e-04   p_cons 4.934874e-03   p_joint 1.512605e-05

Joint ci ratio: 6.444389e-01	ci left: 1.054979e-05	ci right 2.085315e-05	k: 36	n:2390000
Cons ci ratio: 3.599119e-02	ci left: 4.850011e-03	ci right 5.028179e-03	k: 11803	n:2390000
KS ci ratio: 1.308604e-01	ci left: 3.507509e-04	ci right 4.002636e-04	k: 896	n:2390000
SF3B2   2390000 perm   2640 sec   (905 perm/sec)   p_kst 3.748954e-04   p_cons 4.938494e-03   p_joint 1.506276e-05

Joint ci ratio: 6.444389e-01	ci left: 1.050584e-05	ci right 2.076626e-05	k: 36	n:2400000
Cons ci ratio: 3.594264e-02	ci left: 4.843016e-03	ci right 5.020682e-03	k: 11835	n:2400000
KS ci ratio: 1.306421e-01	ci left: 3.504986e-04	ci right 3.998867e-04	k: 899	n:2400000
SF3B2   2400000 perm   2660 sec   (902 perm/sec)   p_kst 3.745833e-04   p_cons 4.931250e-03   p_joint 1.500000e-05

Joint ci ratio: 6.444389e-01	ci left: 1.046224e-05	ci right 2.068010e-05	k: 36	n:2410000
Cons ci ratio: 3.588061e-02	ci left: 4.839780e-03	ci right 5.017014e-03	k: 11876	n:2410000
KS ci ratio: 1.304973e-01	ci left: 3.498470e-04	ci right 3.990844e-04	k: 901	n:2410000
SF3B2   2410000 perm   2680 sec   (899 perm/sec)   p_kst 3.738589e-04   p_cons 4.927801e-03   p_joint 1.493776e-05

Joint ci ratio: 6.444390e-01	ci left: 1.041901e-05	ci right 2.059464e-05	k: 36	n:2420000
Cons ci ratio: 3.581135e-02	ci left: 4.838619e-03	ci right 5.015461e-03	k: 11922	n:2420000
KS ci ratio: 1.303529e-01	ci left: 3.492008e-04	ci right 3.982887e-04	k: 903	n:2420000
SF3B2   2420000 perm   2700 sec   (896 perm/sec)   p_kst 3.731405e-04   p_cons 4.926446e-03   p_joint 1.487603e-05

Joint ci ratio: 6.444390e-01	ci left: 1.037614e-05	ci right 2.050989e-05	k: 36	n:2430000
Cons ci ratio: 3.572900e-02	ci left: 4.841138e-03	ci right 5.017658e-03	k: 11977	n:2430000
KS ci ratio: 1.301371e-01	ci left: 3.489581e-04	ci right 3.979244e-04	k: 906	n:2430000
SF3B2   2430000 perm   2720 sec   (893 perm/sec)   p_kst 3.728395e-04   p_cons 4.928807e-03   p_joint 1.481481e-05

Joint ci ratio: 6.444390e-01	ci left: 1.033361e-05	ci right 2.042583e-05	k: 36	n:2440000
Cons ci ratio: 3.567105e-02	ci left: 4.837138e-03	ci right 5.013220e-03	k: 12016	n:2440000
KS ci ratio: 1.300655e-01	ci left: 3.479244e-04	ci right 3.967168e-04	k: 907	n:2440000
SF3B2   2440000 perm   2740 sec   (891 perm/sec)   p_kst 3.717213e-04   p_cons 4.924590e-03   p_joint 1.475410e-05

Joint ci ratio: 6.359029e-01	ci left: 1.063325e-05	ci right 2.081611e-05	k: 37	n:2450000
Cons ci ratio: 3.559706e-02	ci left: 4.837621e-03	ci right 5.013348e-03	k: 12066	n:2450000
KS ci ratio: 1.297800e-01	ci left: 3.480839e-04	ci right 3.967832e-04	k: 911	n:2450000
SF3B2   2450000 perm   2760 sec   (888 perm/sec)   p_kst 3.718367e-04   p_cons 4.924898e-03   p_joint 1.510204e-05

Joint ci ratio: 6.359029e-01	ci left: 1.059003e-05	ci right 2.073150e-05	k: 37	n:2460000
Cons ci ratio: 3.552501e-02	ci left: 4.837698e-03	ci right 5.013064e-03	k: 12115	n:2460000
KS ci ratio: 1.296380e-01	ci left: 3.474556e-04	ci right 3.960097e-04	k: 913	n:2460000
SF3B2   2460000 perm   2780 sec   (885 perm/sec)   p_kst 3.711382e-04   p_cons 4.924797e-03   p_joint 1.504065e-05

Joint ci ratio: 6.359030e-01	ci left: 1.054715e-05	ci right 2.064756e-05	k: 37	n:2470000
Cons ci ratio: 3.546218e-02	ci left: 4.835366e-03	ci right 5.010332e-03	k: 12158	n:2470000
KS ci ratio: 1.294257e-01	ci left: 3.472241e-04	ci right 3.956603e-04	k: 916	n:2470000
SF3B2   2470000 perm   2800 sec   (882 perm/sec)   p_kst 3.708502e-04   p_cons 4.922267e-03   p_joint 1.497976e-05

Joint ci ratio: 6.359030e-01	ci left: 1.050462e-05	ci right 2.056431e-05	k: 37	n:2480000
Cons ci ratio: 3.539386e-02	ci left: 4.834653e-03	ci right 5.009248e-03	k: 12205	n:2480000
KS ci ratio: 1.288647e-01	ci left: 3.489456e-04	ci right 3.973948e-04	k: 924	n:2480000
SF3B2   2480000 perm   2821 sec   (879 perm/sec)   p_kst 3.725806e-04   p_cons 4.921371e-03   p_joint 1.491935e-05

Joint ci ratio: 6.359030e-01	ci left: 1.046244e-05	ci right 2.048172e-05	k: 37	n:2490000
Cons ci ratio: 3.530856e-02	ci left: 4.838722e-03	ci right 5.013035e-03	k: 12264	n:2490000
KS ci ratio: 1.285870e-01	ci left: 3.490989e-04	ci right 3.974570e-04	k: 928	n:2490000
SF3B2   2490000 perm   2841 sec   (876 perm/sec)   p_kst 3.726908e-04   p_cons 4.925301e-03   p_joint 1.485944e-05

Joint ci ratio: 6.359030e-01	ci left: 1.042059e-05	ci right 2.039979e-05	k: 37	n:2500000
Cons ci ratio: 3.524399e-02	ci left: 4.837208e-03	ci right 5.011142e-03	k: 12309	n:2500000
KS ci ratio: 1.284489e-01	ci left: 3.484768e-04	ci right 3.966929e-04	k: 930	n:2500000
SF3B2   2500000 perm   2861 sec   (874 perm/sec)   p_kst 3.720000e-04   p_cons 4.923600e-03   p_joint 1.480000e-05

Joint ci ratio: 6.359030e-01	ci left: 1.037907e-05	ci right 2.031852e-05	k: 37	n:2510000
Cons ci ratio: 3.518837e-02	ci left: 4.833337e-03	ci right 5.006852e-03	k: 12348	n:2510000
KS ci ratio: 1.283112e-01	ci left: 3.478596e-04	ci right 3.959348e-04	k: 932	n:2510000
SF3B2   2510000 perm   2882 sec   (871 perm/sec)   p_kst 3.713147e-04   p_cons 4.919522e-03   p_joint 1.474104e-05

Joint ci ratio: 6.359031e-01	ci left: 1.033788e-05	ci right 2.023789e-05	k: 37	n:2520000
Cons ci ratio: 3.511734e-02	ci left: 4.833824e-03	ci right 5.006999e-03	k: 12398	n:2520000
KS ci ratio: 1.280370e-01	ci left: 3.480156e-04	ci right 3.960018e-04	k: 936	n:2520000
SF3B2   2520000 perm   2903 sec   (868 perm/sec)   p_kst 3.714286e-04   p_cons 4.919841e-03   p_joint 1.468254e-05

Joint ci ratio: 6.359031e-01	ci left: 1.029702e-05	ci right 2.015790e-05	k: 37	n:2530000
Cons ci ratio: 3.504250e-02	ci left: 4.835483e-03	ci right 5.008341e-03	k: 12451	n:2530000
KS ci ratio: 1.279006e-01	ci left: 3.474053e-04	ci right 3.952524e-04	k: 938	n:2530000
SF3B2   2530000 perm   2923 sec   (865 perm/sec)   p_kst 3.707510e-04   p_cons 4.921344e-03   p_joint 1.462451e-05

Joint ci ratio: 6.359031e-01	ci left: 1.025648e-05	ci right 2.007854e-05	k: 37	n:2540000
Cons ci ratio: 3.497657e-02	ci left: 4.834788e-03	ci right 5.007289e-03	k: 12498	n:2540000
KS ci ratio: 1.276290e-01	ci left: 3.475620e-04	ci right 3.953214e-04	k: 942	n:2540000
SF3B2   2540000 perm   2944 sec   (863 perm/sec)   p_kst 3.708661e-04   p_cons 4.920472e-03   p_joint 1.456693e-05

Joint ci ratio: 6.359031e-01	ci left: 1.021626e-05	ci right 1.999980e-05	k: 37	n:2550000
Cons ci ratio: 3.490681e-02	ci left: 4.835264e-03	ci right 5.007431e-03	k: 12548	n:2550000
KS ci ratio: 1.273592e-01	ci left: 3.477176e-04	ci right 3.953898e-04	k: 946	n:2550000
SF3B2   2550000 perm   2965 sec   (860 perm/sec)   p_kst 3.709804e-04   p_cons 4.920784e-03   p_joint 1.450980e-05

Joint ci ratio: 6.359031e-01	ci left: 1.017635e-05	ci right 1.992167e-05	k: 37	n:2560000
Cons ci ratio: 3.482497e-02	ci left: 4.839223e-03	ci right 5.011119e-03	k: 12607	n:2560000
KS ci ratio: 1.272921e-01	ci left: 3.467375e-04	ci right 3.942483e-04	k: 947	n:2560000
SF3B2   2560000 perm   2986 sec   (857 perm/sec)   p_kst 3.699219e-04   p_cons 4.924609e-03   p_joint 1.445313e-05

Joint ci ratio: 6.359031e-01	ci left: 1.013676e-05	ci right 1.984416e-05	k: 37	n:2570000
Cons ci ratio: 3.476578e-02	ci left: 4.836979e-03	ci right 5.008497e-03	k: 12650	n:2570000
KS ci ratio: 1.269577e-01	ci left: 3.472720e-04	ci right 3.947217e-04	k: 952	n:2570000
SF3B2   2570000 perm   3007 sec   (855 perm/sec)   p_kst 3.704280e-04   p_cons 4.922179e-03   p_joint 1.439689e-05

Joint ci ratio: 6.359032e-01	ci left: 1.009747e-05	ci right 1.976724e-05	k: 37	n:2580000
Cons ci ratio: 3.470140e-02	ci left: 4.836290e-03	ci right 5.007460e-03	k: 12697	n:2580000
KS ci ratio: 1.266259e-01	ci left: 3.478025e-04	ci right 3.951911e-04	k: 957	n:2580000
SF3B2   2580000 perm   3028 sec   (852 perm/sec)   p_kst 3.709302e-04   p_cons 4.921318e-03   p_joint 1.434109e-05

Joint ci ratio: 6.359032e-01	ci left: 1.005848e-05	ci right 1.969092e-05	k: 37	n:2590000
Cons ci ratio: 3.463464e-02	ci left: 4.836372e-03	ci right 5.007209e-03	k: 12746	n:2590000
KS ci ratio: 1.262312e-01	ci left: 3.487030e-04	ci right 3.960551e-04	k: 963	n:2590000
SF3B2   2590000 perm   3049 sec   (849 perm/sec)   p_kst 3.718147e-04   p_cons 4.921236e-03   p_joint 1.428571e-05

Joint ci ratio: 6.359032e-01	ci left: 1.001979e-05	ci right 1.961519e-05	k: 37	n:2600000
Cons ci ratio: 3.458864e-02	ci left: 4.830734e-03	ci right 5.001141e-03	k: 12780	n:2600000
KS ci ratio: 1.260352e-01	ci left: 3.484793e-04	ci right 3.957221e-04	k: 966	n:2600000
SF3B2   2600000 perm   3070 sec   (847 perm/sec)   p_kst 3.715385e-04   p_cons 4.915385e-03   p_joint 1.423077e-05

Joint ci ratio: 6.359032e-01	ci left: 9.981404e-06	ci right 1.954003e-05	k: 37	n:2610000
Cons ci ratio: 3.451982e-02	ci left: 4.831597e-03	ci right 5.001688e-03	k: 12831	n:2610000
KS ci ratio: 1.259051e-01	ci left: 3.478862e-04	ci right 3.949963e-04	k: 968	n:2610000
SF3B2   2610000 perm   3092 sec   (844 perm/sec)   p_kst 3.708812e-04   p_cons 4.916092e-03   p_joint 1.417625e-05

Joint ci ratio: 6.359032e-01	ci left: 9.943307e-06	ci right 1.946545e-05	k: 37	n:2620000
Cons ci ratio: 3.446083e-02	ci left: 4.829805e-03	ci right 4.999537e-03	k: 12875	n:2620000
KS ci ratio: 1.256461e-01	ci left: 3.480371e-04	ci right 3.950634e-04	k: 972	n:2620000
SF3B2   2620000 perm   3113 sec   (842 perm/sec)   p_kst 3.709924e-04   p_cons 4.914122e-03   p_joint 1.412214e-05

Joint ci ratio: 6.359033e-01	ci left: 9.905500e-06	ci right 1.939144e-05	k: 37	n:2630000
Cons ci ratio: 3.439143e-02	ci left: 4.831042e-03	ci right 5.000469e-03	k: 12927	n:2630000
KS ci ratio: 1.254528e-01	ci left: 3.478186e-04	ci right 3.947378e-04	k: 975	n:2630000
SF3B2   2630000 perm   3134 sec   (839 perm/sec)   p_kst 3.707224e-04   p_cons 4.915209e-03   p_joint 1.406844e-05

Joint ci ratio: 6.359033e-01	ci left: 9.867979e-06	ci right 1.931799e-05	k: 37	n:2640000
Cons ci ratio: 3.432246e-02	ci left: 4.832271e-03	ci right 5.001394e-03	k: 12979	n:2640000
KS ci ratio: 1.252605e-01	ci left: 3.476019e-04	ci right 3.944145e-04	k: 978	n:2640000
SF3B2   2640000 perm   3155 sec   (837 perm/sec)   p_kst 3.704545e-04   p_cons 4.916288e-03   p_joint 1.401515e-05

Joint ci ratio: 6.276976e-01	ci left: 1.014759e-05	ci right 1.968220e-05	k: 38	n:2650000
Cons ci ratio: 3.425521e-02	ci left: 4.833116e-03	ci right 5.001931e-03	k: 13030	n:2650000
KS ci ratio: 1.248783e-01	ci left: 3.484835e-04	ci right 3.952611e-04	k: 984	n:2650000
SF3B2   2650000 perm   3177 sec   (834 perm/sec)   p_kst 3.713208e-04   p_cons 4.916981e-03   p_joint 1.433962e-05

Joint ci ratio: 6.198016e-01	ci left: 1.042589e-05	ci right 2.004291e-05	k: 39	n:2660000
Cons ci ratio: 3.418311e-02	ci left: 4.835446e-03	ci right 5.003980e-03	k: 13085	n:2660000
KS ci ratio: 1.247518e-01	ci left: 3.479018e-04	ci right 3.945505e-04	k: 986	n:2660000
SF3B2   2660000 perm   3198 sec   (832 perm/sec)   p_kst 3.706767e-04   p_cons 4.919173e-03   p_joint 1.466165e-05

Joint ci ratio: 6.198017e-01	ci left: 1.038684e-05	ci right 1.996784e-05	k: 39	n:2670000
Cons ci ratio: 3.412060e-02	ci left: 4.835160e-03	ci right 5.003370e-03	k: 13133	n:2670000
KS ci ratio: 1.244998e-01	ci left: 3.480502e-04	ci right 3.946176e-04	k: 990	n:2670000
SF3B2   2670000 perm   3220 sec   (829 perm/sec)   p_kst 3.707865e-04   p_cons 4.918727e-03   p_joint 1.460674e-05

Joint ci ratio: 6.198017e-01	ci left: 1.034808e-05	ci right 1.989334e-05	k: 39	n:2680000
Cons ci ratio: 3.405454e-02	ci left: 4.835986e-03	ci right 5.003892e-03	k: 13184	n:2680000
KS ci ratio: 1.243118e-01	ci left: 3.478361e-04	ci right 3.942994e-04	k: 993	n:2680000
SF3B2   2680000 perm   3242 sec   (827 perm/sec)   p_kst 3.705224e-04   p_cons 4.919403e-03   p_joint 1.455224e-05

Joint ci ratio: 6.198017e-01	ci left: 1.030962e-05	ci right 1.981938e-05	k: 39	n:2690000
Cons ci ratio: 3.399014e-02	ci left: 4.836438e-03	ci right 5.004036e-03	k: 13234	n:2690000
KS ci ratio: 1.240624e-01	ci left: 3.479838e-04	ci right 3.943667e-04	k: 997	n:2690000
SF3B2   2690000 perm   3264 sec   (824 perm/sec)   p_kst 3.706320e-04   p_cons 4.919703e-03   p_joint 1.449814e-05

Joint ci ratio: 6.198017e-01	ci left: 1.027143e-05	ci right 1.974598e-05	k: 39	n:2700000
Cons ci ratio: 3.392868e-02	ci left: 4.836152e-03	ci right 5.003431e-03	k: 13282	n:2700000
KS ci ratio: 1.239383e-01	ci left: 3.474128e-04	ci right 3.936698e-04	k: 999	n:2700000
SF3B2   2700000 perm   3286 sec   (822 perm/sec)   p_kst 3.700000e-04   p_cons 4.919259e-03   p_joint 1.444444e-05

Joint ci ratio: 6.198017e-01	ci left: 1.023353e-05	ci right 1.967312e-05	k: 39	n:2710000
Cons ci ratio: 3.385989e-02	ci left: 4.838064e-03	ci right 5.005063e-03	k: 13336	n:2710000
KS ci ratio: 1.238146e-01	ci left: 3.468459e-04	ci right 3.929781e-04	k: 1001	n:2710000
SF3B2   2710000 perm   3308 sec   (819 perm/sec)   p_kst 3.693727e-04   p_cons 4.921033e-03   p_joint 1.439114e-05

Joint ci ratio: 6.198018e-01	ci left: 1.019591e-05	ci right 1.960079e-05	k: 39	n:2720000
Cons ci ratio: 3.381691e-02	ci left: 4.832671e-03	ci right 4.999268e-03	k: 13370	n:2720000
KS ci ratio: 1.236297e-01	ci left: 3.466396e-04	ci right 3.926703e-04	k: 1004	n:2720000
SF3B2   2720000 perm   3330 sec   (817 perm/sec)   p_kst 3.691176e-04   p_cons 4.915441e-03   p_joint 1.433824e-05

Joint ci ratio: 6.121964e-01	ci left: 1.046763e-05	ci right 1.995183e-05	k: 40	n:2730000
Cons ci ratio: 3.375512e-02	ci left: 4.832766e-03	ci right 4.999056e-03	k: 13419	n:2730000
KS ci ratio: 1.232622e-01	ci left: 3.474998e-04	ci right 3.934976e-04	k: 1010	n:2730000
SF3B2   2730000 perm   3351 sec   (815 perm/sec)   p_kst 3.699634e-04   p_cons 4.915385e-03   p_joint 1.465201e-05

Joint ci ratio: 5.977896e-01	ci left: 1.104743e-05	ci right 2.071958e-05	k: 42	n:2740000
Cons ci ratio: 3.368487e-02	ci left: 4.835394e-03	ci right 5.001422e-03	k: 13475	n:2740000
KS ci ratio: 1.230191e-01	ci left: 3.476464e-04	ci right 3.935663e-04	k: 1014	n:2740000
SF3B2   2740000 perm   3373 sec   (812 perm/sec)   p_kst 3.700730e-04   p_cons 4.917883e-03   p_joint 1.532847e-05

Joint ci ratio: 5.977896e-01	ci left: 1.100726e-05	ci right 2.064424e-05	k: 42	n:2750000
Cons ci ratio: 3.361381e-02	ci left: 4.838363e-03	ci right 5.004136e-03	k: 13532	n:2750000
KS ci ratio: 1.228377e-01	ci left: 3.474396e-04	ci right 3.932596e-04	k: 1017	n:2750000
SF3B2   2750000 perm   3396 sec   (810 perm/sec)   p_kst 3.698182e-04   p_cons 4.920727e-03   p_joint 1.527273e-05

Joint ci ratio: 5.977896e-01	ci left: 1.096738e-05	ci right 2.056944e-05	k: 42	n:2760000
Cons ci ratio: 3.355312e-02	ci left: 4.838438e-03	ci right 5.003908e-03	k: 13581	n:2760000
KS ci ratio: 1.227173e-01	ci left: 3.468831e-04	ci right 3.925816e-04	k: 1019	n:2760000
SF3B2   2760000 perm   3419 sec   (807 perm/sec)   p_kst 3.692029e-04   p_cons 4.920652e-03   p_joint 1.521739e-05

Joint ci ratio: 5.977896e-01	ci left: 1.092778e-05	ci right 2.049518e-05	k: 42	n:2770000
Cons ci ratio: 3.349152e-02	ci left: 4.838870e-03	ci right 5.004045e-03	k: 13631	n:2770000
KS ci ratio: 1.224773e-01	ci left: 3.470306e-04	ci right 3.926527e-04	k: 1023	n:2770000
SF3B2   2770000 perm   3442 sec   (805 perm/sec)   p_kst 3.693141e-04   p_cons 4.920939e-03   p_joint 1.516245e-05

Joint ci ratio: 5.977897e-01	ci left: 1.088848e-05	ci right 2.042146e-05	k: 42	n:2780000
Cons ci ratio: 3.341800e-02	ci left: 4.842866e-03	ci right 5.007808e-03	k: 13691	n:2780000
KS ci ratio: 1.222983e-01	ci left: 3.468284e-04	ci right 3.923524e-04	k: 1026	n:2780000
SF3B2   2780000 perm   3466 sec   (802 perm/sec)   p_kst 3.690647e-04   p_cons 4.924820e-03   p_joint 1.510791e-05

Joint ci ratio: 5.977897e-01	ci left: 1.084945e-05	ci right 2.034826e-05	k: 42	n:2790000
Cons ci ratio: 3.336080e-02	ci left: 4.842213e-03	ci right 5.006846e-03	k: 13738	n:2790000
KS ci ratio: 1.221795e-01	ci left: 3.462802e-04	ci right 3.916849e-04	k: 1028	n:2790000
SF3B2   2790000 perm   3489 sec   (800 perm/sec)   p_kst 3.684588e-04   p_cons 4.924014e-03   p_joint 1.505376e-05

Joint ci ratio: 5.977897e-01	ci left: 1.081070e-05	ci right 2.027559e-05	k: 42	n:2800000
Cons ci ratio: 3.329662e-02	ci left: 4.843691e-03	ci right 5.008050e-03	k: 13791	n:2800000
KS ci ratio: 1.220018e-01	ci left: 3.460822e-04	ci right 3.913901e-04	k: 1031	n:2800000
SF3B2   2800000 perm   3513 sec   (797 perm/sec)   p_kst 3.682143e-04   p_cons 4.925357e-03   p_joint 1.500000e-05

Joint ci ratio: 5.977897e-01	ci left: 1.077223e-05	ci right 2.020343e-05	k: 42	n:2810000
Cons ci ratio: 3.324004e-02	ci left: 4.843040e-03	ci right 5.007093e-03	k: 13838	n:2810000
KS ci ratio: 1.218837e-01	ci left: 3.455406e-04	ci right 3.907307e-04	k: 1033	n:2810000
SF3B2   2810000 perm   3537 sec   (795 perm/sec)   p_kst 3.676157e-04   p_cons 4.924555e-03   p_joint 1.494662e-05

Joint ci ratio: 5.977897e-01	ci left: 1.073403e-05	ci right 2.013179e-05	k: 42	n:2820000
Cons ci ratio: 3.317895e-02	ci left: 4.843801e-03	ci right 5.007573e-03	k: 13889	n:2820000
KS ci ratio: 1.214732e-01	ci left: 3.467220e-04	ci right 3.919029e-04	k: 1040	n:2820000
SF3B2   2820000 perm   3560 sec   (792 perm/sec)   p_kst 3.687943e-04   p_cons 4.925177e-03   p_joint 1.489362e-05

Joint ci ratio: 5.977897e-01	ci left: 1.069610e-05	ci right 2.006065e-05	k: 42	n:2830000
Cons ci ratio: 3.313970e-02	ci left: 4.838249e-03	ci right 5.001636e-03	k: 13922	n:2830000
KS ci ratio: 1.214149e-01	ci left: 3.458395e-04	ci right 3.908822e-04	k: 1041	n:2830000
SF3B2   2830000 perm   3584 sec   (790 perm/sec)   p_kst 3.678445e-04   p_cons 4.919435e-03   p_joint 1.484099e-05

Joint ci ratio: 5.977898e-01	ci left: 1.065844e-05	ci right 1.999002e-05	k: 42	n:2840000
Cons ci ratio: 3.308511e-02	ci left: 4.837276e-03	ci right 5.000356e-03	k: 13968	n:2840000
KS ci ratio: 1.210091e-01	ci left: 3.470118e-04	ci right 3.920454e-04	k: 1048	n:2840000
SF3B2   2840000 perm   3609 sec   (787 perm/sec)   p_kst 3.690141e-04   p_cons 4.918310e-03   p_joint 1.478873e-05

Joint ci ratio: 5.977898e-01	ci left: 1.062104e-05	ci right 1.991988e-05	k: 42	n:2850000
Cons ci ratio: 3.302014e-02	ci left: 4.839442e-03	ci right 5.002268e-03	k: 14023	n:2850000
KS ci ratio: 1.206645e-01	ci left: 3.478358e-04	ci right 3.928386e-04	k: 1054	n:2850000
SF3B2   2850000 perm   3633 sec   (784 perm/sec)   p_kst 3.698246e-04   p_cons 4.920351e-03   p_joint 1.473684e-05

Joint ci ratio: 5.977898e-01	ci left: 1.058390e-05	ci right 1.985023e-05	k: 42	n:2860000
Cons ci ratio: 3.295907e-02	ci left: 4.840553e-03	ci right 5.003109e-03	k: 14075	n:2860000
KS ci ratio: 1.203795e-01	ci left: 3.483152e-04	ci right 3.932660e-04	k: 1059	n:2860000
SF3B2   2860000 perm   3657 sec   (782 perm/sec)   p_kst 3.702797e-04   p_cons 4.921329e-03   p_joint 1.468531e-05

Joint ci ratio: 5.909576e-01	ci left: 1.084299e-05	ci right 2.018138e-05	k: 43	n:2870000
Cons ci ratio: 3.290420e-02	ci left: 4.839928e-03	ci right 5.002188e-03	k: 14122	n:2870000
KS ci ratio: 1.201530e-01	ci left: 3.484534e-04	ci right 3.933313e-04	k: 1063	n:2870000
SF3B2   2870000 perm   3680 sec   (780 perm/sec)   p_kst 3.703833e-04   p_cons 4.920557e-03   p_joint 1.498258e-05

Joint ci ratio: 5.909576e-01	ci left: 1.080534e-05	ci right 2.011131e-05	k: 43	n:2880000
Cons ci ratio: 3.283563e-02	ci left: 4.843441e-03	ci right 5.005474e-03	k: 14181	n:2880000
KS ci ratio: 1.198156e-01	ci left: 3.492643e-04	ci right 3.941114e-04	k: 1069	n:2880000
SF3B2   2880000 perm   3704 sec   (778 perm/sec)   p_kst 3.711806e-04   p_cons 4.923958e-03   p_joint 1.493056e-05

Joint ci ratio: 5.909576e-01	ci left: 1.076795e-05	ci right 2.004172e-05	k: 43	n:2890000
Cons ci ratio: 3.278021e-02	ci left: 4.843154e-03	ci right 5.004899e-03	k: 14229	n:2890000
KS ci ratio: 1.196480e-01	ci left: 3.490627e-04	ci right 3.938169e-04	k: 1072	n:2890000
SF3B2   2890000 perm   3727 sec   (775 perm/sec)   p_kst 3.709343e-04   p_cons 4.923529e-03   p_joint 1.487889e-05

Joint ci ratio: 5.843545e-01	ci left: 1.102432e-05	ci right 2.036820e-05	k: 44	n:2900000
Cons ci ratio: 3.272622e-02	ci left: 4.842528e-03	ci right 5.003980e-03	k: 14276	n:2900000
KS ci ratio: 1.193702e-01	ci left: 3.495316e-04	ci right 3.942345e-04	k: 1077	n:2900000
SF3B2   2900000 perm   3751 sec   (773 perm/sec)   p_kst 3.713793e-04   p_cons 4.922759e-03   p_joint 1.517241e-05

Joint ci ratio: 5.843545e-01	ci left: 1.098644e-05	ci right 2.029821e-05	k: 44	n:2910000
Cons ci ratio: 3.266791e-02	ci left: 4.843269e-03	ci right 5.004454e-03	k: 14327	n:2910000
KS ci ratio: 1.191493e-01	ci left: 3.496641e-04	ci right 3.942953e-04	k: 1081	n:2910000
SF3B2   2910000 perm   3775 sec   (771 perm/sec)   p_kst 3.714777e-04   p_cons 4.923368e-03   p_joint 1.512027e-05

Joint ci ratio: 5.843545e-01	ci left: 1.094881e-05	ci right 2.022870e-05	k: 44	n:2920000
Cons ci ratio: 3.261676e-02	ci left: 4.841968e-03	ci right 5.002852e-03	k: 14372	n:2920000
KS ci ratio: 1.190394e-01	ci left: 3.491311e-04	ci right 3.936503e-04	k: 1083	n:2920000
SF3B2   2920000 perm   3799 sec   (769 perm/sec)   p_kst 3.708904e-04   p_cons 4.921918e-03   p_joint 1.506849e-05

Joint ci ratio: 5.843545e-01	ci left: 1.091144e-05	ci right 2.015966e-05	k: 44	n:2930000
Cons ci ratio: 3.256244e-02	ci left: 4.841691e-03	ci right 5.002293e-03	k: 14420	n:2930000
KS ci ratio: 1.187658e-01	ci left: 3.495953e-04	ci right 3.940640e-04	k: 1088	n:2930000
SF3B2   2930000 perm   3823 sec   (766 perm/sec)   p_kst 3.713311e-04   p_cons 4.921502e-03   p_joint 1.501706e-05

Joint ci ratio: 5.843545e-01	ci left: 1.087433e-05	ci right 2.009109e-05	k: 44	n:2940000
Cons ci ratio: 3.249823e-02	ci left: 4.844453e-03	ci right 5.004824e-03	k: 14477	n:2940000
KS ci ratio: 1.184399e-01	ci left: 3.503865e-04	ci right 3.948250e-04	k: 1094	n:2940000
SF3B2   2940000 perm   3846 sec   (764 perm/sec)   p_kst 3.721088e-04   p_cons 4.924150e-03   p_joint 1.496599e-05

Joint ci ratio: 5.843545e-01	ci left: 1.083747e-05	ci right 2.002298e-05	k: 44	n:2950000
Cons ci ratio: 3.245011e-02	ci left: 4.842489e-03	ci right 5.002553e-03	k: 14520	n:2950000
KS ci ratio: 1.182242e-01	ci left: 3.505145e-04	ci right 3.948826e-04	k: 1098	n:2950000
SF3B2   2950000 perm   3870 sec   (762 perm/sec)   p_kst 3.722034e-04   p_cons 4.922034e-03   p_joint 1.491525e-05

Joint ci ratio: 5.843546e-01	ci left: 1.080085e-05	ci right 1.995534e-05	k: 44	n:2960000
Cons ci ratio: 3.239103e-02	ci left: 4.843890e-03	ci right 5.003703e-03	k: 14573	n:2960000
KS ci ratio: 1.180096e-01	ci left: 3.506418e-04	ci right 3.949398e-04	k: 1102	n:2960000
SF3B2   2960000 perm   3894 sec   (760 perm/sec)   p_kst 3.722973e-04   p_cons 4.923311e-03   p_joint 1.486486e-05

Joint ci ratio: 5.843546e-01	ci left: 1.076449e-05	ci right 1.988815e-05	k: 44	n:2970000
Cons ci ratio: 3.234005e-02	ci left: 4.842943e-03	ci right 5.002469e-03	k: 14619	n:2970000
KS ci ratio: 1.176899e-01	ci left: 3.514218e-04	ci right 3.956898e-04	k: 1108	n:2970000
SF3B2   2970000 perm   3918 sec   (758 perm/sec)   p_kst 3.730640e-04   p_cons 4.922222e-03   p_joint 1.481481e-05

Joint ci ratio: 5.843546e-01	ci left: 1.072836e-05	ci right 1.982141e-05	k: 44	n:2980000
Cons ci ratio: 3.228379e-02	ci left: 4.843667e-03	ci right 5.002934e-03	k: 14670	n:2980000
KS ci ratio: 1.174782e-01	ci left: 3.515453e-04	ci right 3.957437e-04	k: 1112	n:2980000
SF3B2   2980000 perm   3943 sec   (756 perm/sec)   p_kst 3.731544e-04   p_cons 4.922819e-03   p_joint 1.476510e-05

Joint ci ratio: 5.843546e-01	ci left: 1.069248e-05	ci right 1.975512e-05	k: 44	n:2990000
Cons ci ratio: 3.223881e-02	ci left: 4.841070e-03	ci right 5.000025e-03	k: 14711	n:2990000
KS ci ratio: 1.173728e-01	ci left: 3.510189e-04	ci right 3.951087e-04	k: 1114	n:2990000
SF3B2   2990000 perm   3968 sec   (754 perm/sec)   p_kst 3.725753e-04   p_cons 4.920067e-03   p_joint 1.471572e-05

Joint ci ratio: 5.843546e-01	ci left: 1.065684e-05	ci right 1.968927e-05	k: 44	n:3000000
Cons ci ratio: 3.218417e-02	ci left: 4.841465e-03	ci right 5.000159e-03	k: 14761	n:3000000
KS ci ratio: 1.170583e-01	ci left: 3.517902e-04	ci right 3.958503e-04	k: 1120	n:3000000
SF3B2   3000000 perm   3992 sec   (751 perm/sec)   p_kst 3.733333e-04   p_cons 4.920333e-03   p_joint 1.466667e-05

Joint ci ratio: 5.843546e-01	ci left: 1.062144e-05	ci right 1.962385e-05	k: 44	n:3010000
Cons ci ratio: 3.213197e-02	ci left: 4.841199e-03	ci right 4.999623e-03	k: 14809	n:3010000
KS ci ratio: 1.169540e-01	ci left: 3.512664e-04	ci right 3.952190e-04	k: 1122	n:3010000
SF3B2   3010000 perm   4017 sec   (749 perm/sec)   p_kst 3.727575e-04   p_cons 4.919934e-03   p_joint 1.461794e-05

Joint ci ratio: 5.843546e-01	ci left: 1.058627e-05	ci right 1.955887e-05	k: 44	n:3020000
Cons ci ratio: 3.207461e-02	ci left: 4.842578e-03	ci right 5.000758e-03	k: 14862	n:3020000
KS ci ratio: 1.168500e-01	ci left: 3.507462e-04	ci right 3.945920e-04	k: 1124	n:3020000
SF3B2   3020000 perm   4041 sec   (747 perm/sec)   p_kst 3.721854e-04   p_cons 4.921192e-03   p_joint 1.456954e-05

Joint ci ratio: 5.843547e-01	ci left: 1.055133e-05	ci right 1.949432e-05	k: 44	n:3030000
Cons ci ratio: 3.202835e-02	ci left: 4.840673e-03	ci right 4.998559e-03	k: 14905	n:3030000
KS ci ratio: 1.166946e-01	ci left: 3.505498e-04	ci right 3.943087e-04	k: 1127	n:3030000
SF3B2   3030000 perm   4066 sec   (745 perm/sec)   p_kst 3.719472e-04   p_cons 4.919142e-03   p_joint 1.452145e-05

Joint ci ratio: 5.779680e-01	ci left: 1.079716e-05	ci right 1.980704e-05	k: 45	n:3040000
Cons ci ratio: 3.197261e-02	ci left: 4.841718e-03	ci right 4.999359e-03	k: 14957	n:3040000
KS ci ratio: 1.165397e-01	ci left: 3.503547e-04	ci right 3.940273e-04	k: 1130	n:3040000
SF3B2   3040000 perm   4090 sec   (743 perm/sec)   p_kst 3.717105e-04   p_cons 4.920066e-03   p_joint 1.480263e-05

Joint ci ratio: 5.779680e-01	ci left: 1.076176e-05	ci right 1.974210e-05	k: 45	n:3050000
Cons ci ratio: 3.192358e-02	ci left: 4.840805e-03	ci right 4.998170e-03	k: 15003	n:3050000
KS ci ratio: 1.162829e-01	ci left: 3.507976e-04	ci right 3.944224e-04	k: 1135	n:3050000
SF3B2   3050000 perm   4116 sec   (741 perm/sec)   p_kst 3.721311e-04   p_cons 4.919016e-03   p_joint 1.475410e-05

Joint ci ratio: 5.779680e-01	ci left: 1.072659e-05	ci right 1.967758e-05	k: 45	n:3060000
Cons ci ratio: 3.187052e-02	ci left: 4.841195e-03	ci right 4.998306e-03	k: 15053	n:3060000
KS ci ratio: 1.162830e-01	ci left: 3.496512e-04	ci right 3.931335e-04	k: 1135	n:3060000
SF3B2   3060000 perm   4140 sec   (739 perm/sec)   p_kst 3.709150e-04   p_cons 4.919281e-03   p_joint 1.470588e-05

Joint ci ratio: 5.779680e-01	ci left: 1.069165e-05	ci right 1.961348e-05	k: 45	n:3070000
Cons ci ratio: 3.181878e-02	ci left: 4.841260e-03	ci right 4.998113e-03	k: 15102	n:3070000
KS ci ratio: 1.160788e-01	ci left: 3.497773e-04	ci right 3.931937e-04	k: 1139	n:3070000
SF3B2   3070000 perm   4165 sec   (737 perm/sec)   p_kst 3.710098e-04   p_cons 4.919218e-03   p_joint 1.465798e-05

Joint ci ratio: 5.779681e-01	ci left: 1.065694e-05	ci right 1.954980e-05	k: 45	n:3080000
Cons ci ratio: 3.177466e-02	ci left: 4.839069e-03	ci right 4.995630e-03	k: 15144	n:3080000
KS ci ratio: 1.157240e-01	ci left: 3.508486e-04	ci right 3.942557e-04	k: 1146	n:3080000
SF3B2   3080000 perm   4190 sec   (735 perm/sec)   p_kst 3.720779e-04   p_cons 4.916883e-03   p_joint 1.461039e-05

Joint ci ratio: 5.779681e-01	ci left: 1.062245e-05	ci right 1.948653e-05	k: 45	n:3090000
Cons ci ratio: 3.171081e-02	ci left: 4.842993e-03	ci right 4.999361e-03	k: 15205	n:3090000
KS ci ratio: 1.156233e-01	ci left: 3.503416e-04	ci right 3.936457e-04	k: 1148	n:3090000
SF3B2   3090000 perm   4215 sec   (733 perm/sec)   p_kst 3.715210e-04   p_cons 4.920712e-03   p_joint 1.456311e-05

Joint ci ratio: 5.779681e-01	ci left: 1.058818e-05	ci right 1.942368e-05	k: 45	n:3100000
Cons ci ratio: 3.166192e-02	ci left: 4.842412e-03	ci right 4.998515e-03	k: 15252	n:3100000
KS ci ratio: 1.155228e-01	ci left: 3.498380e-04	ci right 3.930397e-04	k: 1150	n:3100000
SF3B2   3100000 perm   4240 sec   (731 perm/sec)   p_kst 3.709677e-04   p_cons 4.920000e-03   p_joint 1.451613e-05

Joint ci ratio: 5.779681e-01	ci left: 1.055414e-05	ci right 1.936122e-05	k: 45	n:3110000
Cons ci ratio: 3.161638e-02	ci left: 4.840877e-03	ci right 4.996703e-03	k: 15296	n:3110000
KS ci ratio: 1.153226e-01	ci left: 3.499622e-04	ci right 3.930992e-04	k: 1154	n:3110000
SF3B2   3110000 perm   4265 sec   (729 perm/sec)   p_kst 3.710611e-04   p_cons 4.918328e-03   p_joint 1.446945e-05

Joint ci ratio: 5.779681e-01	ci left: 1.052031e-05	ci right 1.929916e-05	k: 45	n:3120000
Cons ci ratio: 3.156587e-02	ci left: 4.840943e-03	ci right 4.996517e-03	k: 15345	n:3120000
KS ci ratio: 1.151731e-01	ci left: 3.497743e-04	ci right 3.928285e-04	k: 1157	n:3120000
SF3B2   3120000 perm   4290 sec   (727 perm/sec)   p_kst 3.708333e-04   p_cons 4.918269e-03   p_joint 1.442308e-05

Joint ci ratio: 5.779681e-01	ci left: 1.048670e-05	ci right 1.923751e-05	k: 45	n:3130000
Cons ci ratio: 3.150737e-02	ci left: 4.843544e-03	ci right 4.998908e-03	k: 15402	n:3130000
KS ci ratio: 1.149747e-01	ci left: 3.498980e-04	ci right 3.928882e-04	k: 1161	n:3130000
SF3B2   3130000 perm   4315 sec   (725 perm/sec)   p_kst 3.709265e-04   p_cons 4.920767e-03   p_joint 1.437700e-05

Joint ci ratio: 5.779681e-01	ci left: 1.045330e-05	ci right 1.917624e-05	k: 45	n:3140000
Cons ci ratio: 3.145430e-02	ci left: 4.844549e-03	ci right 4.999678e-03	k: 15454	n:3140000
KS ci ratio: 1.145319e-01	ci left: 3.515677e-04	ci right 3.945854e-04	k: 1170	n:3140000
SF3B2   3140000 perm   4341 sec   (723 perm/sec)   p_kst 3.726115e-04   p_cons 4.921656e-03   p_joint 1.433121e-05

Joint ci ratio: 5.779682e-01	ci left: 1.042012e-05	ci right 1.911536e-05	k: 45	n:3150000
Cons ci ratio: 3.141474e-02	ci left: 4.841453e-03	ci right 4.996285e-03	k: 15493	n:3150000
KS ci ratio: 1.143855e-01	ci left: 3.513767e-04	ci right 3.943124e-04	k: 1173	n:3150000
SF3B2   3150000 perm   4366 sec   (722 perm/sec)   p_kst 3.723810e-04   p_cons 4.918413e-03   p_joint 1.428571e-05

Joint ci ratio: 5.779682e-01	ci left: 1.038714e-05	ci right 1.905487e-05	k: 45	n:3160000
Cons ci ratio: 3.137026e-02	ci left: 4.839947e-03	ci right 4.994507e-03	k: 15537	n:3160000
KS ci ratio: 1.140943e-01	ci left: 3.521092e-04	ci right 3.950175e-04	k: 1179	n:3160000
SF3B2   3160000 perm   4392 sec   (720 perm/sec)   p_kst 3.731013e-04   p_cons 4.916772e-03   p_joint 1.424051e-05

Joint ci ratio: 5.717864e-01	ci left: 1.062392e-05	ci right 1.935565e-05	k: 46	n:3170000
Cons ci ratio: 3.132394e-02	ci left: 4.839076e-03	ci right 4.993376e-03	k: 15583	n:3170000
KS ci ratio: 1.139495e-01	ci left: 3.519179e-04	ci right 3.947448e-04	k: 1182	n:3170000
SF3B2   3170000 perm   4417 sec   (718 perm/sec)   p_kst 3.728707e-04   p_cons 4.915773e-03   p_joint 1.451104e-05

Joint ci ratio: 5.717865e-01	ci left: 1.059052e-05	ci right 1.929478e-05	k: 46	n:3180000
Cons ci ratio: 3.128084e-02	ci left: 4.837275e-03	ci right 4.991302e-03	k: 15626	n:3180000
KS ci ratio: 1.138053e-01	ci left: 3.517277e-04	ci right 3.944737e-04	k: 1185	n:3180000
SF3B2   3180000 perm   4443 sec   (716 perm/sec)   p_kst 3.726415e-04   p_cons 4.913836e-03   p_joint 1.446541e-05

Joint ci ratio: 5.717865e-01	ci left: 1.055732e-05	ci right 1.923430e-05	k: 46	n:3190000
Cons ci ratio: 3.123492e-02	ci left: 4.836418e-03	ci right 4.990188e-03	k: 15672	n:3190000
KS ci ratio: 1.136617e-01	ci left: 3.515388e-04	ci right 3.942043e-04	k: 1188	n:3190000
SF3B2   3190000 perm   4469 sec   (714 perm/sec)   p_kst 3.724138e-04   p_cons 4.912853e-03   p_joint 1.442006e-05

Joint ci ratio: 5.717865e-01	ci left: 1.052433e-05	ci right 1.917419e-05	k: 46	n:3200000
Cons ci ratio: 3.117426e-02	ci left: 4.840218e-03	ci right 4.993805e-03	k: 15733	n:3200000
KS ci ratio: 1.134234e-01	ci left: 3.519584e-04	ci right 3.945792e-04	k: 1193	n:3200000
SF3B2   3200000 perm   4495 sec   (712 perm/sec)   p_kst 3.728125e-04   p_cons 4.916562e-03   p_joint 1.437500e-05

Joint ci ratio: 5.657989e-01	ci left: 1.075822e-05	ci right 1.947037e-05	k: 47	n:3210000
Cons ci ratio: 3.110900e-02	ci left: 4.845541e-03	ci right 4.998968e-03	k: 15799	n:3210000
KS ci ratio: 1.132339e-01	ci left: 3.520727e-04	ci right 3.946314e-04	k: 1197	n:3210000
SF3B2   3210000 perm   4521 sec   (710 perm/sec)   p_kst 3.728972e-04   p_cons 4.921807e-03   p_joint 1.464174e-05

Joint ci ratio: 5.657990e-01	ci left: 1.072481e-05	ci right 1.940990e-05	k: 47	n:3220000
Cons ci ratio: 3.104808e-02	ci left: 4.849598e-03	ci right 5.002848e-03	k: 15861	n:3220000
KS ci ratio: 1.129514e-01	ci left: 3.527900e-04	ci right 3.953219e-04	k: 1203	n:3220000
SF3B2   3220000 perm   4547 sec   (708 perm/sec)   p_kst 3.736025e-04   p_cons 4.925776e-03   p_joint 1.459627e-05

Joint ci ratio: 5.657990e-01	ci left: 1.069161e-05	ci right 1.934981e-05	k: 47	n:3230000
Cons ci ratio: 3.098165e-02	ci left: 4.855473e-03	ci right 5.008575e-03	k: 15929	n:3230000
KS ci ratio: 1.126709e-01	ci left: 3.535029e-04	ci right 3.960080e-04	k: 1209	n:3230000
SF3B2   3230000 perm   4573 sec   (706 perm/sec)   p_kst 3.743034e-04   p_cons 4.931579e-03   p_joint 1.455108e-05

Joint ci ratio: 5.657990e-01	ci left: 1.065861e-05	ci right 1.929009e-05	k: 47	n:3240000
Cons ci ratio: 3.093995e-02	ci left: 4.853656e-03	ci right 5.006490e-03	k: 15972	n:3240000
KS ci ratio: 1.126245e-01	ci left: 3.527118e-04	ci right 3.951031e-04	k: 1210	n:3240000
SF3B2   3240000 perm   4599 sec   (705 perm/sec)   p_kst 3.734568e-04   p_cons 4.929630e-03   p_joint 1.450617e-05

Joint ci ratio: 5.657990e-01	ci left: 1.062581e-05	ci right 1.923073e-05	k: 47	n:3250000
Cons ci ratio: 3.090423e-02	ci left: 4.850018e-03	ci right 5.002559e-03	k: 16009	n:3250000
KS ci ratio: 1.122082e-01	ci left: 3.543179e-04	ci right 3.967344e-04	k: 1219	n:3250000
SF3B2   3250000 perm   4625 sec   (703 perm/sec)   p_kst 3.750769e-04   p_cons 4.925846e-03   p_joint 1.446154e-05

Joint ci ratio: 5.657990e-01	ci left: 1.059322e-05	ci right 1.917174e-05	k: 47	n:3260000
Cons ci ratio: 3.086091e-02	ci left: 4.848838e-03	ci right 5.001124e-03	k: 16054	n:3260000
KS ci ratio: 1.121164e-01	ci left: 3.538273e-04	ci right 3.961481e-04	k: 1221	n:3260000
SF3B2   3260000 perm   4651 sec   (701 perm/sec)   p_kst 3.745399e-04   p_cons 4.924540e-03   p_joint 1.441718e-05

Joint ci ratio: 5.657990e-01	ci left: 1.056082e-05	ci right 1.911312e-05	k: 47	n:3270000
Cons ci ratio: 3.082259e-02	ci left: 4.846147e-03	ci right 4.998156e-03	k: 16094	n:3270000
KS ci ratio: 1.119333e-01	ci left: 3.539343e-04	ci right 3.961942e-04	k: 1225	n:3270000
SF3B2   3270000 perm   4678 sec   (699 perm/sec)   p_kst 3.746177e-04   p_cons 4.921713e-03   p_joint 1.437309e-05

Joint ci ratio: 5.657990e-01	ci left: 1.052863e-05	ci right 1.905484e-05	k: 47	n:3280000
Cons ci ratio: 3.078440e-02	ci left: 4.843474e-03	ci right 4.995207e-03	k: 16134	n:3280000
KS ci ratio: 1.118877e-01	ci left: 3.531515e-04	ci right 3.952997e-04	k: 1226	n:3280000
SF3B2   3280000 perm   4705 sec   (697 perm/sec)   p_kst 3.737805e-04   p_cons 4.918902e-03   p_joint 1.432927e-05

Joint ci ratio: 5.657991e-01	ci left: 1.049662e-05	ci right 1.899693e-05	k: 47	n:3290000
Cons ci ratio: 3.071869e-02	ci left: 4.849563e-03	ci right 5.001158e-03	k: 16203	n:3290000
KS ci ratio: 1.117058e-01	ci left: 3.532599e-04	ci right 3.953479e-04	k: 1230	n:3290000
SF3B2   3290000 perm   4731 sec   (695 perm/sec)   p_kst 3.738602e-04   p_cons 4.924924e-03   p_joint 1.428571e-05

Joint ci ratio: 5.657991e-01	ci left: 1.046482e-05	ci right 1.893936e-05	k: 47	n:3300000
Cons ci ratio: 3.067994e-02	ci left: 4.847197e-03	ci right 4.998523e-03	k: 16244	n:3300000
KS ci ratio: 1.116152e-01	ci left: 3.527786e-04	ci right 3.947729e-04	k: 1232	n:3300000
SF3B2   3300000 perm   4757 sec   (694 perm/sec)   p_kst 3.733333e-04   p_cons 4.922424e-03   p_joint 1.424242e-05

Joint ci ratio: 5.599958e-01	ci left: 1.069229e-05	ci right 1.922685e-05	k: 48	n:3310000
Cons ci ratio: 3.064134e-02	ci left: 4.844844e-03	ci right 4.995903e-03	k: 16285	n:3310000
KS ci ratio: 1.115248e-01	ci left: 3.523002e-04	ci right 3.942013e-04	k: 1234	n:3310000
SF3B2   3310000 perm   4784 sec   (692 perm/sec)   p_kst 3.728097e-04   p_cons 4.919940e-03   p_joint 1.450151e-05

Joint ci ratio: 5.599958e-01	ci left: 1.066008e-05	ci right 1.916894e-05	k: 48	n:3320000
Cons ci ratio: 3.059911e-02	ci left: 4.843702e-03	ci right 4.994513e-03	k: 16330	n:3320000
KS ci ratio: 1.113446e-01	ci left: 3.524102e-04	ci right 3.942524e-04	k: 1238	n:3320000
SF3B2   3320000 perm   4811 sec   (690 perm/sec)   p_kst 3.728916e-04   p_cons 4.918675e-03   p_joint 1.445783e-05

Joint ci ratio: 5.543675e-01	ci left: 1.088605e-05	ci right 1.945359e-05	k: 49	n:3330000
Cons ci ratio: 3.056363e-02	ci left: 4.840480e-03	ci right 4.991013e-03	k: 16368	n:3330000
KS ci ratio: 1.112549e-01	ci left: 3.519358e-04	ci right 3.936857e-04	k: 1240	n:3330000
SF3B2   3330000 perm   4838 sec   (688 perm/sec)   p_kst 3.723724e-04   p_cons 4.915315e-03   p_joint 1.471471e-05

Joint ci ratio: 5.543675e-01	ci left: 1.085345e-05	ci right 1.939534e-05	k: 49	n:3340000
Cons ci ratio: 3.051612e-02	ci left: 4.841140e-03	ci right 4.991456e-03	k: 16419	n:3340000
KS ci ratio: 1.111654e-01	ci left: 3.514643e-04	ci right 3.931225e-04	k: 1242	n:3340000
SF3B2   3340000 perm   4865 sec   (687 perm/sec)   p_kst 3.718563e-04   p_cons 4.915868e-03   p_joint 1.467066e-05

Joint ci ratio: 5.543675e-01	ci left: 1.082105e-05	ci right 1.933745e-05	k: 49	n:3350000
Cons ci ratio: 3.047255e-02	ci left: 4.840612e-03	ci right 4.990693e-03	k: 16466	n:3350000
KS ci ratio: 1.110315e-01	ci left: 3.512858e-04	ci right 3.928694e-04	k: 1245	n:3350000
SF3B2   3350000 perm   4892 sec   (685 perm/sec)   p_kst 3.716418e-04   p_cons 4.915224e-03   p_joint 1.462687e-05

Joint ci ratio: 5.543675e-01	ci left: 1.078885e-05	ci right 1.927989e-05	k: 49	n:3360000
Cons ci ratio: 3.042916e-02	ci left: 4.840087e-03	ci right 4.989935e-03	k: 16513	n:3360000
KS ci ratio: 1.109870e-01	ci left: 3.505296e-04	ci right 3.920060e-04	k: 1246	n:3360000
SF3B2   3360000 perm   4919 sec   (683 perm/sec)   p_kst 3.708333e-04   p_cons 4.914583e-03   p_joint 1.458333e-05

Joint ci ratio: 5.543675e-01	ci left: 1.075683e-05	ci right 1.922268e-05	k: 49	n:3370000
Cons ci ratio: 3.038412e-02	ci left: 4.840154e-03	ci right 4.989778e-03	k: 16562	n:3370000
KS ci ratio: 1.108538e-01	ci left: 3.503550e-04	ci right 3.917577e-04	k: 1249	n:3370000
SF3B2   3370000 perm   4948 sec   (681 perm/sec)   p_kst 3.706231e-04   p_cons 4.914540e-03   p_joint 1.454006e-05

Joint ci ratio: 5.543675e-01	ci left: 1.072501e-05	ci right 1.916581e-05	k: 49	n:3380000
Cons ci ratio: 3.034845e-02	ci left: 4.837285e-03	ci right 4.986642e-03	k: 16601	n:3380000
KS ci ratio: 1.108095e-01	ci left: 3.496061e-04	ci right 3.909027e-04	k: 1250	n:3380000
SF3B2   3380000 perm   4976 sec   (679 perm/sec)   p_kst 3.698225e-04   p_cons 4.911538e-03   p_joint 1.449704e-05

Joint ci ratio: 5.543675e-01	ci left: 1.069337e-05	ci right 1.910928e-05	k: 49	n:3390000
Cons ci ratio: 3.030651e-02	ci left: 4.836482e-03	ci right 4.985604e-03	k: 16647	n:3390000
KS ci ratio: 1.107653e-01	ci left: 3.488616e-04	ci right 3.900528e-04	k: 1251	n:3390000
SF3B2   3390000 perm   5003 sec   (678 perm/sec)   p_kst 3.690265e-04   p_cons 4.910619e-03   p_joint 1.445428e-05

Joint ci ratio: 5.543676e-01	ci left: 1.066192e-05	ci right 1.905307e-05	k: 49	n:3400000
Cons ci ratio: 3.026383e-02	ci left: 4.835976e-03	ci right 4.984869e-03	k: 16694	n:3400000
KS ci ratio: 1.105447e-01	ci left: 3.492654e-04	ci right 3.904168e-04	k: 1256	n:3400000
SF3B2   3400000 perm   5030 sec   (676 perm/sec)   p_kst 3.694118e-04   p_cons 4.910000e-03   p_joint 1.441176e-05

Joint ci ratio: 5.543676e-01	ci left: 1.063065e-05	ci right 1.899720e-05	k: 49	n:3410000
Cons ci ratio: 3.022677e-02	ci left: 4.833727e-03	ci right 4.982365e-03	k: 16735	n:3410000
KS ci ratio: 1.102382e-01	ci left: 3.502373e-04	ci right 3.913814e-04	k: 1263	n:3410000
SF3B2   3410000 perm   5058 sec   (674 perm/sec)   p_kst 3.703812e-04   p_cons 4.907625e-03   p_joint 1.436950e-05

Joint ci ratio: 5.543676e-01	ci left: 1.059957e-05	ci right 1.894165e-05	k: 49	n:3420000
Cons ci ratio: 3.017630e-02	ci left: 4.835844e-03	ci right 4.984294e-03	k: 16791	n:3420000
KS ci ratio: 1.101076e-01	ci left: 3.500662e-04	ci right 3.911383e-04	k: 1266	n:3420000
SF3B2   3420000 perm   5085 sec   (673 perm/sec)   p_kst 3.701754e-04   p_cons 4.909649e-03   p_joint 1.432749e-05

Joint ci ratio: 5.436020e-01	ci left: 1.107082e-05	ci right 1.954969e-05	k: 51	n:3430000
Cons ci ratio: 3.012338e-02	ci left: 4.838817e-03	ci right 4.987094e-03	k: 16850	n:3430000
KS ci ratio: 1.100208e-01	ci left: 3.496127e-04	ci right 3.905971e-04	k: 1268	n:3430000
SF3B2   3430000 perm   5113 sec   (671 perm/sec)   p_kst 3.696793e-04   p_cons 4.912536e-03   p_joint 1.486880e-05

Joint ci ratio: 5.436020e-01	ci left: 1.103864e-05	ci right 1.949286e-05	k: 51	n:3440000
Cons ci ratio: 3.007432e-02	ci left: 4.840619e-03	ci right 4.988705e-03	k: 16905	n:3440000
KS ci ratio: 1.099342e-01	ci left: 3.491618e-04	ci right 3.900590e-04	k: 1270	n:3440000
SF3B2   3440000 perm   5141 sec   (669 perm/sec)   p_kst 3.691860e-04   p_cons 4.914244e-03   p_joint 1.482558e-05

Joint ci ratio: 5.436020e-01	ci left: 1.100664e-05	ci right 1.943636e-05	k: 51	n:3450000
Cons ci ratio: 3.002727e-02	ci left: 4.841835e-03	ci right 4.989723e-03	k: 16958	n:3450000
KS ci ratio: 1.098911e-01	ci left: 3.484316e-04	ci right 3.892263e-04	k: 1271	n:3450000
SF3B2   3450000 perm   5168 sec   (668 perm/sec)   p_kst 3.684058e-04   p_cons 4.915362e-03   p_joint 1.478261e-05

Joint ci ratio: 5.436020e-01	ci left: 1.097483e-05	ci right 1.938018e-05	k: 51	n:3460000
Cons ci ratio: 2.998221e-02	ci left: 4.842470e-03	ci right 4.990152e-03	k: 17009	n:3460000
KS ci ratio: 1.097187e-01	ci left: 3.485489e-04	ci right 3.892891e-04	k: 1275	n:3460000
SF3B2   3460000 perm   5196 sec   (666 perm/sec)   p_kst 3.684971e-04   p_cons 4.915896e-03   p_joint 1.473988e-05

Joint ci ratio: 5.436020e-01	ci left: 1.094320e-05	ci right 1.932433e-05	k: 51	n:3470000
Cons ci ratio: 2.994265e-02	ci left: 4.841386e-03	ci right 4.988837e-03	k: 17054	n:3470000
KS ci ratio: 1.095471e-01	ci left: 3.486655e-04	ci right 3.893516e-04	k: 1279	n:3470000
SF3B2   3470000 perm   5224 sec   (664 perm/sec)   p_kst 3.685879e-04   p_cons 4.914697e-03   p_joint 1.469741e-05

Joint ci ratio: 5.436021e-01	ci left: 1.091176e-05	ci right 1.926880e-05	k: 51	n:3480000
Cons ci ratio: 2.990237e-02	ci left: 4.840594e-03	ci right 4.987818e-03	k: 17100	n:3480000
KS ci ratio: 1.093763e-01	ci left: 3.487816e-04	ci right 3.894137e-04	k: 1283	n:3480000
SF3B2   3480000 perm   5252 sec   (663 perm/sec)   p_kst 3.686782e-04   p_cons 4.913793e-03   p_joint 1.465517e-05

Joint ci ratio: 5.436021e-01	ci left: 1.088049e-05	ci right 1.921359e-05	k: 51	n:3490000
Cons ci ratio: 2.985874e-02	ci left: 4.840943e-03	ci right 4.987960e-03	k: 17150	n:3490000
KS ci ratio: 1.092913e-01	ci left: 3.483396e-04	ci right 3.888866e-04	k: 1285	n:3490000
SF3B2   3490000 perm   5280 sec   (661 perm/sec)   p_kst 3.681948e-04   p_cons 4.914040e-03   p_joint 1.461318e-05

Joint ci ratio: 5.436021e-01	ci left: 1.084940e-05	ci right 1.915869e-05	k: 51	n:3500000
Cons ci ratio: 2.981357e-02	ci left: 4.841859e-03	ci right 4.988677e-03	k: 17202	n:3500000
KS ci ratio: 1.091640e-01	ci left: 3.481781e-04	ci right 3.886560e-04	k: 1288	n:3500000
SF3B2   3500000 perm   5308 sec   (659 perm/sec)   p_kst 3.680000e-04   p_cons 4.914857e-03   p_joint 1.457143e-05

Joint ci ratio: 5.436021e-01	ci left: 1.081849e-05	ci right 1.910411e-05	k: 51	n:3510000
Cons ci ratio: 2.977033e-02	ci left: 4.842203e-03	ci right 4.988815e-03	k: 17252	n:3510000
KS ci ratio: 1.089950e-01	ci left: 3.482946e-04	ci right 3.887194e-04	k: 1292	n:3510000
SF3B2   3510000 perm   5336 sec   (658 perm/sec)   p_kst 3.680912e-04   p_cons 4.915100e-03   p_joint 1.452991e-05

Joint ci ratio: 5.436021e-01	ci left: 1.078776e-05	ci right 1.904984e-05	k: 51	n:3520000
Cons ci ratio: 2.972642e-02	ci left: 4.842828e-03	ci right 4.989239e-03	k: 17303	n:3520000
KS ci ratio: 1.087430e-01	ci left: 3.489633e-04	ci right 3.893661e-04	k: 1298	n:3520000
SF3B2   3520000 perm   5364 sec   (656 perm/sec)   p_kst 3.687500e-04   p_cons 4.915625e-03   p_joint 1.448864e-05

Joint ci ratio: 5.384493e-01	ci left: 1.100174e-05	ci right 1.931754e-05	k: 52	n:3530000
Cons ci ratio: 2.969130e-02	ci left: 4.840637e-03	ci right 4.986806e-03	k: 17344	n:3530000
KS ci ratio: 1.084927e-01	ci left: 3.496283e-04	ci right 3.900089e-04	k: 1304	n:3530000
SF3B2   3530000 perm   5393 sec   (655 perm/sec)   p_kst 3.694051e-04   p_cons 4.913314e-03   p_joint 1.473088e-05

Joint ci ratio: 5.384493e-01	ci left: 1.097066e-05	ci right 1.926297e-05	k: 52	n:3540000
Cons ci ratio: 2.964945e-02	ci left: 4.840702e-03	ci right 4.986663e-03	k: 17393	n:3540000
KS ci ratio: 1.082854e-01	ci left: 3.500148e-04	ci right 3.903579e-04	k: 1309	n:3540000
SF3B2   3540000 perm   5421 sec   (653 perm/sec)   p_kst 3.697740e-04   p_cons 4.913277e-03   p_joint 1.468927e-05

Joint ci ratio: 5.334403e-01	ci left: 1.118330e-05	ci right 1.952821e-05	k: 53	n:3550000
Cons ci ratio: 2.960607e-02	ci left: 4.841326e-03	ci right 4.987089e-03	k: 17444	n:3550000
KS ci ratio: 1.082029e-01	ci left: 3.495769e-04	ci right 3.898369e-04	k: 1311	n:3550000
SF3B2   3550000 perm   5449 sec   (651 perm/sec)   p_kst 3.692958e-04   p_cons 4.913803e-03   p_joint 1.492958e-05

Joint ci ratio: 5.334403e-01	ci left: 1.115188e-05	ci right 1.947336e-05	k: 53	n:3560000
Cons ci ratio: 2.955949e-02	ci left: 4.843062e-03	ci right 4.988644e-03	k: 17499	n:3560000
KS ci ratio: 1.079153e-01	ci left: 3.505081e-04	ci right 3.907613e-04	k: 1318	n:3560000
SF3B2   3560000 perm   5478 sec   (650 perm/sec)   p_kst 3.702247e-04   p_cons 4.915449e-03   p_joint 1.488764e-05

Joint ci ratio: 5.334403e-01	ci left: 1.112065e-05	ci right 1.941881e-05	k: 53	n:3570000
Cons ci ratio: 2.951819e-02	ci left: 4.843120e-03	ci right 4.988497e-03	k: 17548	n:3570000
KS ci ratio: 1.077928e-01	ci left: 3.503440e-04	ci right 3.905297e-04	k: 1321	n:3570000
SF3B2   3570000 perm   5506 sec   (648 perm/sec)   p_kst 3.700280e-04   p_cons 4.915406e-03   p_joint 1.484594e-05

Joint ci ratio: 5.334403e-01	ci left: 1.108958e-05	ci right 1.936457e-05	k: 53	n:3580000
Cons ci ratio: 2.947539e-02	ci left: 4.843733e-03	ci right 4.988913e-03	k: 17599	n:3580000
KS ci ratio: 1.075490e-01	ci left: 3.509962e-04	ci right 3.911599e-04	k: 1327	n:3580000
SF3B2   3580000 perm   5535 sec   (647 perm/sec)   p_kst 3.706704e-04   p_cons 4.915922e-03   p_joint 1.480447e-05

Joint ci ratio: 5.334403e-01	ci left: 1.105869e-05	ci right 1.931063e-05	k: 53	n:3590000
Cons ci ratio: 2.943528e-02	ci left: 4.843512e-03	ci right 4.988486e-03	k: 17647	n:3590000
KS ci ratio: 1.074681e-01	ci left: 3.505606e-04	ci right 3.906424e-04	k: 1329	n:3590000
SF3B2   3590000 perm   5564 sec   (645 perm/sec)   p_kst 3.701950e-04   p_cons 4.915599e-03   p_joint 1.476323e-05

Joint ci ratio: 5.334404e-01	ci left: 1.102797e-05	ci right 1.925699e-05	k: 53	n:3600000
Cons ci ratio: 2.939867e-02	ci left: 4.842190e-03	ci right 4.986941e-03	k: 17691	n:3600000
KS ci ratio: 1.073471e-01	ci left: 3.503978e-04	ci right 3.904130e-04	k: 1332	n:3600000
SF3B2   3600000 perm   5593 sec   (644 perm/sec)   p_kst 3.700000e-04   p_cons 4.914167e-03   p_joint 1.472222e-05

Joint ci ratio: 5.334404e-01	ci left: 1.099743e-05	ci right 1.920364e-05	k: 53	n:3610000
Cons ci ratio: 2.936137e-02	ci left: 4.841151e-03	ci right 4.985684e-03	k: 17736	n:3610000
KS ci ratio: 1.072266e-01	ci left: 3.502359e-04	ci right 3.901849e-04	k: 1335	n:3610000
SF3B2   3610000 perm   5622 sec   (642 perm/sec)   p_kst 3.698061e-04   p_cons 4.913019e-03   p_joint 1.468144e-05

Joint ci ratio: 5.334404e-01	ci left: 1.096705e-05	ci right 1.915059e-05	k: 53	n:3620000
Cons ci ratio: 2.932670e-02	ci left: 4.839295e-03	ci right 4.983598e-03	k: 17778	n:3620000
KS ci ratio: 1.070265e-01	ci left: 3.506126e-04	ci right 3.905252e-04	k: 1340	n:3620000
SF3B2   3620000 perm   5651 sec   (641 perm/sec)   p_kst 3.701657e-04   p_cons 4.911050e-03   p_joint 1.464088e-05

Joint ci ratio: 5.334404e-01	ci left: 1.093683e-05	ci right 1.909784e-05	k: 53	n:3630000
Cons ci ratio: 2.928555e-02	ci left: 4.839636e-03	ci right 4.983745e-03	k: 17828	n:3630000
KS ci ratio: 1.068275e-01	ci left: 3.509873e-04	ci right 3.908636e-04	k: 1345	n:3630000
SF3B2   3630000 perm   5680 sec   (639 perm/sec)   p_kst 3.705234e-04   p_cons 4.911295e-03   p_joint 1.460055e-05

Joint ci ratio: 5.334404e-01	ci left: 1.090679e-05	ci right 1.904537e-05	k: 53	n:3640000
Cons ci ratio: 2.924703e-02	ci left: 4.839158e-03	ci right 4.983060e-03	k: 17875	n:3640000
KS ci ratio: 1.066691e-01	ci left: 3.510926e-04	ci right 3.909180e-04	k: 1349	n:3640000
SF3B2   3640000 perm   5709 sec   (638 perm/sec)   p_kst 3.706044e-04   p_cons 4.910714e-03   p_joint 1.456044e-05

Joint ci ratio: 5.334404e-01	ci left: 1.087691e-05	ci right 1.899319e-05	k: 53	n:3650000
Cons ci ratio: 2.921031e-02	ci left: 4.838139e-03	ci right 4.981826e-03	k: 17920	n:3650000
KS ci ratio: 1.065114e-01	ci left: 3.511974e-04	ci right 3.909721e-04	k: 1353	n:3650000
SF3B2   3650000 perm   5738 sec   (636 perm/sec)   p_kst 3.706849e-04   p_cons 4.909589e-03   p_joint 1.452055e-05

Joint ci ratio: 5.334404e-01	ci left: 1.084719e-05	ci right 1.894130e-05	k: 53	n:3660000
Cons ci ratio: 2.917209e-02	ci left: 4.837668e-03	ci right 4.981150e-03	k: 17967	n:3660000
KS ci ratio: 1.063936e-01	ci left: 3.510357e-04	ci right 3.907454e-04	k: 1356	n:3660000
SF3B2   3660000 perm   5767 sec   (635 perm/sec)   p_kst 3.704918e-04   p_cons 4.909016e-03   p_joint 1.448087e-05

Joint ci ratio: 5.334404e-01	ci left: 1.081763e-05	ci right 1.888969e-05	k: 53	n:3670000
Cons ci ratio: 2.913158e-02	ci left: 4.838011e-03	ci right 4.981301e-03	k: 18017	n:3670000
KS ci ratio: 1.060813e-01	ci left: 3.522011e-04	ci right 3.919184e-04	k: 1364	n:3670000
SF3B2   3670000 perm   5796 sec   (633 perm/sec)   p_kst 3.716621e-04   p_cons 4.909264e-03   p_joint 1.444142e-05

Joint ci ratio: 5.334404e-01	ci left: 1.078823e-05	ci right 1.883836e-05	k: 53	n:3680000
Cons ci ratio: 2.910338e-02	ci left: 4.834306e-03	ci right 4.977345e-03	k: 18052	n:3680000
KS ci ratio: 1.060814e-01	ci left: 3.512440e-04	ci right 3.908534e-04	k: 1364	n:3680000
SF3B2   3680000 perm   5825 sec   (632 perm/sec)   p_kst 3.706522e-04   p_cons 4.905435e-03   p_joint 1.440217e-05

Joint ci ratio: 5.334405e-01	ci left: 1.075900e-05	ci right 1.878730e-05	k: 53	n:3690000
Cons ci ratio: 2.907042e-02	ci left: 4.832235e-03	ci right 4.975048e-03	k: 18093	n:3690000
KS ci ratio: 1.058876e-01	ci left: 3.516112e-04	ci right 3.911851e-04	k: 1369	n:3690000
SF3B2   3690000 perm   5855 sec   (630 perm/sec)   p_kst 3.710027e-04   p_cons 4.903252e-03   p_joint 1.436314e-05

Joint ci ratio: 5.285687e-01	ci left: 1.096393e-05	ci right 1.904274e-05	k: 54	n:3700000
Cons ci ratio: 2.903033e-02	ci left: 4.832590e-03	ci right 4.975214e-03	k: 18143	n:3700000
KS ci ratio: 1.057333e-01	ci left: 3.517134e-04	ci right 3.912375e-04	k: 1373	n:3700000
SF3B2   3700000 perm   5885 sec   (629 perm/sec)   p_kst 3.710811e-04   p_cons 4.903514e-03   p_joint 1.459459e-05

Joint ci ratio: 5.285687e-01	ci left: 1.093437e-05	ci right 1.899141e-05	k: 54	n:3710000
Cons ci ratio: 2.898961e-02	ci left: 4.833211e-03	ci right 4.975650e-03	k: 18194	n:3710000
KS ci ratio: 1.056181e-01	ci left: 3.515527e-04	ci right 3.910130e-04	k: 1376	n:3710000
SF3B2   3710000 perm   5914 sec   (627 perm/sec)   p_kst 3.708895e-04   p_cons 4.904043e-03   p_joint 1.455526e-05

Joint ci ratio: 5.285687e-01	ci left: 1.090498e-05	ci right 1.894036e-05	k: 54	n:3720000
Cons ci ratio: 2.893950e-02	ci left: 4.837032e-03	ci right 4.979332e-03	k: 18257	n:3720000
KS ci ratio: 1.054650e-01	ci left: 3.516545e-04	ci right 3.910655e-04	k: 1380	n:3720000
SF3B2   3720000 perm   5944 sec   (626 perm/sec)   p_kst 3.709677e-04   p_cons 4.907796e-03   p_joint 1.451613e-05

Joint ci ratio: 5.285687e-01	ci left: 1.087575e-05	ci right 1.888958e-05	k: 54	n:3730000
Cons ci ratio: 2.890709e-02	ci left: 4.834976e-03	ci right 4.977054e-03	k: 18298	n:3730000
KS ci ratio: 1.052746e-01	ci left: 3.520169e-04	ci right 3.913929e-04	k: 1385	n:3730000
SF3B2   3730000 perm   5974 sec   (624 perm/sec)   p_kst 3.713137e-04   p_cons 4.905630e-03   p_joint 1.447721e-05

Joint ci ratio: 5.238280e-01	ci left: 1.107850e-05	ci right 1.914168e-05	k: 55	n:3740000
Cons ci ratio: 2.886689e-02	ci left: 4.835586e-03	ci right 4.977481e-03	k: 18349	n:3740000
KS ci ratio: 1.051609e-01	ci left: 3.518567e-04	ci right 3.911696e-04	k: 1388	n:3740000
SF3B2   3740000 perm   6003 sec   (623 perm/sec)   p_kst 3.711230e-04   p_cons 4.906150e-03   p_joint 1.470588e-05

Joint ci ratio: 5.238281e-01	ci left: 1.104896e-05	ci right 1.909064e-05	k: 55	n:3750000
Cons ci ratio: 2.883236e-02	ci left: 4.834340e-03	ci right 4.976026e-03	k: 18393	n:3750000
KS ci ratio: 1.051231e-01	ci left: 3.511781e-04	ci right 3.904002e-04	k: 1389	n:3750000
SF3B2   3750000 perm   6034 sec   (621 perm/sec)   p_kst 3.704000e-04   p_cons 4.904800e-03   p_joint 1.466667e-05

Joint ci ratio: 5.238281e-01	ci left: 1.101957e-05	ci right 1.903987e-05	k: 55	n:3760000
Cons ci ratio: 2.878933e-02	ci left: 4.836005e-03	ci right 4.977525e-03	k: 18448	n:3760000
KS ci ratio: 1.050476e-01	ci left: 3.507620e-04	ci right 3.899078e-04	k: 1391	n:3760000
SF3B2   3760000 perm   6064 sec   (620 perm/sec)   p_kst 3.699468e-04   p_cons 4.906383e-03   p_joint 1.462766e-05

Joint ci ratio: 5.192127e-01	ci left: 1.122066e-05	ci right 1.928926e-05	k: 56	n:3770000
Cons ci ratio: 2.875664e-02	ci left: 4.834238e-03	ci right 4.975543e-03	k: 18490	n:3770000
KS ci ratio: 1.048219e-01	ci left: 3.513814e-04	ci right 3.905068e-04	k: 1397	n:3770000
SF3B2   3770000 perm   6094 sec   (619 perm/sec)   p_kst 3.705570e-04   p_cons 4.904509e-03   p_joint 1.485411e-05

Joint ci ratio: 5.192127e-01	ci left: 1.119097e-05	ci right 1.923823e-05	k: 56	n:3780000
Cons ci ratio: 2.872095e-02	ci left: 4.833531e-03	ci right 4.974637e-03	k: 18536	n:3780000
KS ci ratio: 1.046722e-01	ci left: 3.514823e-04	ci right 3.905596e-04	k: 1401	n:3780000
SF3B2   3780000 perm   6125 sec   (617 perm/sec)   p_kst 3.706349e-04   p_cons 4.903704e-03   p_joint 1.481481e-05

Joint ci ratio: 5.192127e-01	ci left: 1.116144e-05	ci right 1.918747e-05	k: 56	n:3790000
Cons ci ratio: 2.868151e-02	ci left: 4.834137e-03	ci right 4.975064e-03	k: 18587	n:3790000
KS ci ratio: 1.045232e-01	ci left: 3.515827e-04	ci right 3.906121e-04	k: 1405	n:3790000
SF3B2   3790000 perm   6155 sec   (616 perm/sec)   p_kst 3.707124e-04   p_cons 4.904222e-03   p_joint 1.477573e-05

Joint ci ratio: 5.192127e-01	ci left: 1.113207e-05	ci right 1.913697e-05	k: 56	n:3800000
Cons ci ratio: 2.864533e-02	ci left: 4.833696e-03	ci right 4.974429e-03	k: 18634	n:3800000
KS ci ratio: 1.044119e-01	ci left: 3.514263e-04	ci right 3.903943e-04	k: 1408	n:3800000
SF3B2   3800000 perm   6186 sec   (614 perm/sec)   p_kst 3.705263e-04   p_cons 4.903684e-03   p_joint 1.473684e-05

Joint ci ratio: 5.192127e-01	ci left: 1.110285e-05	ci right 1.908675e-05	k: 56	n:3810000
Cons ci ratio: 2.860774e-02	ci left: 4.833778e-03	ci right 4.974326e-03	k: 18683	n:3810000
KS ci ratio: 1.043379e-01	ci left: 3.510151e-04	ci right 3.899083e-04	k: 1410	n:3810000
SF3B2   3810000 perm   6217 sec   (613 perm/sec)   p_kst 3.700787e-04   p_cons 4.903675e-03   p_joint 1.469816e-05

Joint ci ratio: 5.192127e-01	ci left: 1.107379e-05	ci right 1.903678e-05	k: 56	n:3820000
Cons ci ratio: 2.857107e-02	ci left: 4.833599e-03	ci right 4.973959e-03	k: 18731	n:3820000
KS ci ratio: 1.042272e-01	ci left: 3.508611e-04	ci right 3.896934e-04	k: 1413	n:3820000
SF3B2   3820000 perm   6248 sec   (611 perm/sec)   p_kst 3.698953e-04   p_cons 4.903403e-03   p_joint 1.465969e-05

Joint ci ratio: 5.192128e-01	ci left: 1.104487e-05	ci right 1.898708e-05	k: 56	n:3830000
Cons ci ratio: 2.852691e-02	ci left: 4.836015e-03	ci right 4.976224e-03	k: 18789	n:3830000
KS ci ratio: 1.041904e-01	ci left: 3.501993e-04	ci right 3.889438e-04	k: 1414	n:3830000
SF3B2   3830000 perm   6279 sec   (610 perm/sec)   p_kst 3.691906e-04   p_cons 4.905744e-03   p_joint 1.462141e-05

Joint ci ratio: 5.147173e-01	ci left: 1.124253e-05	ci right 1.923176e-05	k: 57	n:3840000
Cons ci ratio: 2.849054e-02	ci left: 4.835832e-03	ci right 4.975854e-03	k: 18837	n:3840000
KS ci ratio: 1.040067e-01	ci left: 3.505555e-04	ci right 3.892669e-04	k: 1419	n:3840000
SF3B2   3840000 perm   6309 sec   (609 perm/sec)   p_kst 3.695313e-04   p_cons 4.905469e-03   p_joint 1.484375e-05

Joint ci ratio: 5.147173e-01	ci left: 1.121333e-05	ci right 1.918181e-05	k: 57	n:3850000
Cons ci ratio: 2.845280e-02	ci left: 4.836166e-03	ci right 4.976009e-03	k: 18887	n:3850000
KS ci ratio: 1.040068e-01	ci left: 3.496450e-04	ci right 3.882558e-04	k: 1419	n:3850000
SF3B2   3850000 perm   6340 sec   (607 perm/sec)   p_kst 3.685714e-04   p_cons 4.905714e-03   p_joint 1.480519e-05

Joint ci ratio: 5.147173e-01	ci left: 1.118428e-05	ci right 1.913211e-05	k: 57	n:3860000
Cons ci ratio: 2.841145e-02	ci left: 4.837784e-03	ci right 4.977468e-03	k: 18942	n:3860000
KS ci ratio: 1.038971e-01	ci left: 3.494962e-04	ci right 3.880474e-04	k: 1422	n:3860000
SF3B2   3860000 perm   6370 sec   (606 perm/sec)   p_kst 3.683938e-04   p_cons 4.907254e-03   p_joint 1.476684e-05

Joint ci ratio: 5.147173e-01	ci left: 1.115538e-05	ci right 1.908267e-05	k: 57	n:3870000
Cons ci ratio: 2.837778e-02	ci left: 4.836829e-03	ci right 4.976317e-03	k: 18987	n:3870000
KS ci ratio: 1.037150e-01	ci left: 3.498515e-04	ci right 3.883702e-04	k: 1427	n:3870000
SF3B2   3870000 perm   6401 sec   (605 perm/sec)   p_kst 3.687339e-04   p_cons 4.906202e-03   p_joint 1.472868e-05

Joint ci ratio: 5.147173e-01	ci left: 1.112663e-05	ci right 1.903349e-05	k: 57	n:3880000
Cons ci ratio: 2.833600e-02	ci left: 4.838694e-03	ci right 4.978026e-03	k: 19043	n:3880000
KS ci ratio: 1.035701e-01	ci left: 3.499540e-04	ci right 3.884269e-04	k: 1431	n:3880000
SF3B2   3880000 perm   6432 sec   (603 perm/sec)   p_kst 3.688144e-04   p_cons 4.907990e-03   p_joint 1.469072e-05

Joint ci ratio: 5.147173e-01	ci left: 1.109802e-05	ci right 1.898456e-05	k: 57	n:3890000
Cons ci ratio: 2.830259e-02	ci left: 4.837741e-03	ci right 4.976879e-03	k: 19088	n:3890000
KS ci ratio: 1.035701e-01	ci left: 3.490544e-04	ci right 3.874284e-04	k: 1431	n:3890000
SF3B2   3890000 perm   6463 sec   (602 perm/sec)   p_kst 3.678663e-04   p_cons 4.906941e-03   p_joint 1.465296e-05

Joint ci ratio: 5.147173e-01	ci left: 1.106957e-05	ci right 1.893589e-05	k: 57	n:3900000
Cons ci ratio: 2.826189e-02	ci left: 4.839339e-03	ci right 4.978320e-03	k: 19143	n:3900000
KS ci ratio: 1.034618e-01	ci left: 3.489087e-04	ci right 3.872241e-04	k: 1434	n:3900000
SF3B2   3900000 perm   6494 sec   (601 perm/sec)   p_kst 3.676923e-04   p_cons 4.908462e-03   p_joint 1.461538e-05

Joint ci ratio: 5.147173e-01	ci left: 1.104126e-05	ci right 1.888746e-05	k: 57	n:3910000
Cons ci ratio: 2.821840e-02	ci left: 4.841946e-03	ci right 4.980784e-03	k: 19202	n:3910000
KS ci ratio: 1.032820e-01	ci left: 3.492621e-04	ci right 3.875456e-04	k: 1439	n:3910000
SF3B2   3910000 perm   6525 sec   (599 perm/sec)   p_kst 3.680307e-04   p_cons 4.910997e-03   p_joint 1.457801e-05

Joint ci ratio: 5.147173e-01	ci left: 1.101309e-05	ci right 1.883927e-05	k: 57	n:3920000
Cons ci ratio: 2.816703e-02	ci left: 4.847325e-03	ci right 4.986061e-03	k: 19272	n:3920000
KS ci ratio: 1.032104e-01	ci left: 3.488681e-04	ci right 3.870803e-04	k: 1441	n:3920000
SF3B2   3920000 perm   6556 sec   (598 perm/sec)   p_kst 3.676020e-04   p_cons 4.916327e-03   p_joint 1.454082e-05

Joint ci ratio: 5.147174e-01	ci left: 1.098507e-05	ci right 1.879134e-05	k: 57	n:3930000
Cons ci ratio: 2.813056e-02	ci left: 4.847624e-03	ci right 4.986186e-03	k: 19322	n:3930000
KS ci ratio: 1.031032e-01	ci left: 3.487241e-04	ci right 3.868784e-04	k: 1444	n:3930000
SF3B2   3930000 perm   6587 sec   (597 perm/sec)   p_kst 3.674300e-04   p_cons 4.916539e-03   p_joint 1.450382e-05

Joint ci ratio: 5.147174e-01	ci left: 1.095719e-05	ci right 1.874364e-05	k: 57	n:3940000
Cons ci ratio: 2.809278e-02	ci left: 4.848426e-03	ci right 4.986821e-03	k: 19374	n:3940000
KS ci ratio: 1.029608e-01	ci left: 3.488281e-04	ci right 3.869379e-04	k: 1448	n:3940000
SF3B2   3940000 perm   6618 sec   (595 perm/sec)   p_kst 3.675127e-04   p_cons 4.917259e-03   p_joint 1.446701e-05

Joint ci ratio: 5.147174e-01	ci left: 1.092945e-05	ci right 1.869619e-05	k: 57	n:3950000
Cons ci ratio: 2.806023e-02	ci left: 4.847464e-03	ci right 4.985669e-03	k: 19419	n:3950000
KS ci ratio: 1.029609e-01	ci left: 3.479449e-04	ci right 3.859583e-04	k: 1448	n:3950000
SF3B2   3950000 perm   6650 sec   (594 perm/sec)   p_kst 3.665823e-04   p_cons 4.916203e-03   p_joint 1.443038e-05

Joint ci ratio: 5.147174e-01	ci left: 1.090185e-05	ci right 1.864898e-05	k: 57	n:3960000
Cons ci ratio: 2.802200e-02	ci left: 4.848513e-03	ci right 4.986556e-03	k: 19472	n:3960000
KS ci ratio: 1.027483e-01	ci left: 3.485425e-04	ci right 3.865378e-04	k: 1454	n:3960000
SF3B2   3960000 perm   6682 sec   (593 perm/sec)   p_kst 3.671717e-04   p_cons 4.917172e-03   p_joint 1.439394e-05

Joint ci ratio: 5.147174e-01	ci left: 1.087439e-05	ci right 1.860200e-05	k: 57	n:3970000
Cons ci ratio: 2.798609e-02	ci left: 4.848806e-03	ci right 4.986678e-03	k: 19522	n:3970000
KS ci ratio: 1.026426e-01	ci left: 3.484008e-04	ci right 3.863392e-04	k: 1457	n:3970000
SF3B2   3970000 perm   6715 sec   (591 perm/sec)   p_kst 3.670025e-04   p_cons 4.917380e-03   p_joint 1.435768e-05

Joint ci ratio: 5.147174e-01	ci left: 1.084706e-05	ci right 1.855527e-05	k: 57	n:3980000
Cons ci ratio: 2.794817e-02	ci left: 4.849847e-03	ci right 4.987559e-03	k: 19575	n:3980000
KS ci ratio: 1.025371e-01	ci left: 3.482598e-04	ci right 3.861416e-04	k: 1460	n:3980000
SF3B2   3980000 perm   6747 sec   (590 perm/sec)   p_kst 3.668342e-04   p_cons 4.918342e-03   p_joint 1.432161e-05

Joint ci ratio: 5.103367e-01	ci left: 1.103807e-05	ci right 1.879155e-05	k: 58	n:3990000
Cons ci ratio: 2.791397e-02	ci left: 4.849638e-03	ci right 4.987173e-03	k: 19623	n:3990000
KS ci ratio: 1.023621e-01	ci left: 3.486080e-04	ci right 3.864590e-04	k: 1465	n:3990000
SF3B2   3990000 perm   6779 sec   (589 perm/sec)   p_kst 3.671679e-04   p_cons 4.918045e-03   p_joint 1.453634e-05

Joint ci ratio: 5.019007e-01	ci left: 1.144660e-05	ci right 1.930793e-05	k: 60	n:4000000
Cons ci ratio: 2.787919e-02	ci left: 4.849678e-03	ci right 4.987040e-03	k: 19672	n:4000000
KS ci ratio: 1.021880e-01	ci left: 3.489546e-04	ci right 3.867749e-04	k: 1470	n:4000000
SF3B2   4000000 perm   6811 sec   (587 perm/sec)   p_kst 3.675000e-04   p_cons 4.918000e-03   p_joint 1.500000e-05

Joint ci ratio: 5.019007e-01	ci left: 1.141805e-05	ci right 1.925978e-05	k: 60	n:4010000
Cons ci ratio: 2.784028e-02	ci left: 4.851204e-03	ci right 4.988415e-03	k: 19727	n:4010000
KS ci ratio: 1.020493e-01	ci left: 3.490564e-04	ci right 3.868333e-04	k: 1474	n:4010000
SF3B2   4010000 perm   6843 sec   (586 perm/sec)   p_kst 3.675810e-04   p_cons 4.919451e-03   p_joint 1.496259e-05

Joint ci ratio: 5.019007e-01	ci left: 1.138965e-05	ci right 1.921187e-05	k: 60	n:4020000
Cons ci ratio: 2.780859e-02	ci left: 4.850253e-03	ci right 4.987278e-03	k: 19772	n:4020000
KS ci ratio: 1.019112e-01	ci left: 3.491577e-04	ci right 3.868914e-04	k: 1478	n:4020000
SF3B2   4020000 perm   6875 sec   (585 perm/sec)   p_kst 3.676617e-04   p_cons 4.918408e-03   p_joint 1.492537e-05

Joint ci ratio: 5.019007e-01	ci left: 1.136139e-05	ci right 1.916420e-05	k: 60	n:4030000
Cons ci ratio: 2.777631e-02	ci left: 4.849553e-03	ci right 4.986396e-03	k: 19818	n:4030000
KS ci ratio: 1.017737e-01	ci left: 3.492586e-04	ci right 3.869492e-04	k: 1482	n:4030000
SF3B2   4030000 perm   6909 sec   (583 perm/sec)   p_kst 3.677419e-04   p_cons 4.917618e-03   p_joint 1.488834e-05

Joint ci ratio: 5.019007e-01	ci left: 1.133327e-05	ci right 1.911676e-05	k: 60	n:4040000
Cons ci ratio: 2.774134e-02	ci left: 4.849839e-03	ci right 4.986516e-03	k: 19868	n:4040000
KS ci ratio: 1.016709e-01	ci left: 3.491178e-04	ci right 3.867529e-04	k: 1485	n:4040000
SF3B2   4040000 perm   6941 sec   (582 perm/sec)   p_kst 3.675743e-04   p_cons 4.917822e-03   p_joint 1.485149e-05

Joint ci ratio: 4.978366e-01	ci left: 1.152105e-05	ci right 1.934738e-05	k: 61	n:4050000
Cons ci ratio: 2.771139e-02	ci left: 4.848408e-03	ci right 4.984894e-03	k: 19911	n:4050000
KS ci ratio: 1.015003e-01	ci left: 3.494590e-04	ci right 3.870639e-04	k: 1490	n:4050000
SF3B2   4050000 perm   6974 sec   (581 perm/sec)   p_kst 3.679012e-04   p_cons 4.916296e-03   p_joint 1.506173e-05

Joint ci ratio: 4.978366e-01	ci left: 1.149267e-05	ci right 1.929973e-05	k: 61	n:4060000
Cons ci ratio: 2.768433e-02	ci left: 4.846005e-03	ci right 4.982289e-03	k: 19950	n:4060000
KS ci ratio: 1.013644e-01	ci left: 3.495585e-04	ci right 3.871207e-04	k: 1494	n:4060000
SF3B2   4060000 perm   7007 sec   (579 perm/sec)   p_kst 3.679803e-04   p_cons 4.913793e-03   p_joint 1.502463e-05

Joint ci ratio: 4.978366e-01	ci left: 1.146443e-05	ci right 1.925231e-05	k: 61	n:4070000
Cons ci ratio: 2.765734e-02	ci left: 4.843615e-03	ci right 4.979696e-03	k: 19989	n:4070000
KS ci ratio: 1.012967e-01	ci left: 3.491785e-04	ci right 3.866734e-04	k: 1496	n:4070000
SF3B2   4070000 perm   7039 sec   (578 perm/sec)   p_kst 3.675676e-04   p_cons 4.911302e-03   p_joint 1.498771e-05

Joint ci ratio: 4.978367e-01	ci left: 1.143633e-05	ci right 1.920512e-05	k: 61	n:4080000
Cons ci ratio: 2.762074e-02	ci left: 4.844643e-03	ci right 4.980571e-03	k: 20042	n:4080000
KS ci ratio: 1.011616e-01	ci left: 3.492783e-04	ci right 3.867309e-04	k: 1500	n:4080000
SF3B2   4080000 perm   7072 sec   (577 perm/sec)   p_kst 3.676471e-04   p_cons 4.912255e-03   p_joint 1.495098e-05

Joint ci ratio: 4.938697e-01	ci left: 1.162228e-05	ci right 1.943302e-05	k: 62	n:4090000
Cons ci ratio: 2.757394e-02	ci left: 4.849310e-03	ci right 4.985134e-03	k: 20110	n:4090000
KS ci ratio: 1.009600e-01	ci left: 3.498542e-04	ci right 3.872894e-04	k: 1506	n:4090000
SF3B2   4090000 perm   7104 sec   (576 perm/sec)   p_kst 3.682152e-04   p_cons 4.916870e-03   p_joint 1.515892e-05

Joint ci ratio: 4.938697e-01	ci left: 1.159393e-05	ci right 1.938562e-05	k: 62	n:4100000
Cons ci ratio: 2.753355e-02	ci left: 4.851773e-03	ci right 4.987464e-03	k: 20169	n:4100000
KS ci ratio: 1.008597e-01	ci left: 3.497142e-04	ci right 3.870949e-04	k: 1509	n:4100000
SF3B2   4100000 perm   7137 sec   (574 perm/sec)   p_kst 3.680488e-04   p_cons 4.919268e-03   p_joint 1.512195e-05

Joint ci ratio: 4.938697e-01	ci left: 1.156572e-05	ci right 1.933845e-05	k: 62	n:4110000
Cons ci ratio: 2.750358e-02	ci left: 4.850600e-03	ci right 4.986108e-03	k: 20213	n:4110000
KS ci ratio: 1.007930e-01	ci left: 3.493376e-04	ci right 3.866520e-04	k: 1511	n:4110000
SF3B2   4110000 perm   7170 sec   (573 perm/sec)   p_kst 3.676399e-04   p_cons 4.918005e-03   p_joint 1.508516e-05

Joint ci ratio: 4.938697e-01	ci left: 1.153765e-05	ci right 1.929151e-05	k: 62	n:4120000
Cons ci ratio: 2.747440e-02	ci left: 4.849192e-03	ci right 4.984515e-03	k: 20256	n:4120000
KS ci ratio: 1.006931e-01	ci left: 3.491995e-04	ci right 3.864600e-04	k: 1514	n:4120000
SF3B2   4120000 perm   7204 sec   (572 perm/sec)   p_kst 3.674757e-04   p_cons 4.916505e-03   p_joint 1.504854e-05

Joint ci ratio: 4.938698e-01	ci left: 1.150971e-05	ci right 1.924480e-05	k: 62	n:4130000
Cons ci ratio: 2.744259e-02	ci left: 4.848753e-03	ci right 4.983904e-03	k: 20303	n:4130000
KS ci ratio: 1.006599e-01	ci left: 3.485900e-04	ci right 3.857725e-04	k: 1515	n:4130000
SF3B2   4130000 perm   7237 sec   (571 perm/sec)   p_kst 3.668281e-04   p_cons 4.915981e-03   p_joint 1.501211e-05

Joint ci ratio: 4.938698e-01	ci left: 1.148191e-05	ci right 1.919832e-05	k: 62	n:4140000
Cons ci ratio: 2.741630e-02	ci left: 4.846396e-03	ci right 4.981351e-03	k: 20342	n:4140000
KS ci ratio: 1.006268e-01	ci left: 3.479835e-04	ci right 3.850883e-04	k: 1516	n:4140000
SF3B2   4140000 perm   7270 sec   (569 perm/sec)   p_kst 3.661836e-04   p_cons 4.913527e-03   p_joint 1.497585e-05

Joint ci ratio: 4.938698e-01	ci left: 1.145425e-05	ci right 1.915206e-05	k: 62	n:4150000
Cons ci ratio: 2.738469e-02	ci left: 4.845966e-03	ci right 4.980750e-03	k: 20389	n:4150000
KS ci ratio: 1.004944e-01	ci left: 3.480846e-04	ci right 3.851485e-04	k: 1520	n:4150000
SF3B2   4150000 perm   7303 sec   (568 perm/sec)   p_kst 3.662651e-04   p_cons 4.913012e-03   p_joint 1.493976e-05

Joint ci ratio: 4.938698e-01	ci left: 1.142671e-05	ci right 1.910602e-05	k: 62	n:4160000
Cons ci ratio: 2.735185e-02	ci left: 4.846015e-03	ci right 4.980637e-03	k: 20438	n:4160000
KS ci ratio: 1.003954e-01	ci left: 3.479509e-04	ci right 3.849619e-04	k: 1523	n:4160000
SF3B2   4160000 perm   7336 sec   (567 perm/sec)   p_kst 3.661058e-04   p_cons 4.912981e-03   p_joint 1.490385e-05

Joint ci ratio: 4.938698e-01	ci left: 1.139931e-05	ci right 1.906020e-05	k: 62	n:4170000
Cons ci ratio: 2.731242e-02	ci left: 4.848446e-03	ci right 4.982938e-03	k: 20497	n:4170000
KS ci ratio: 1.002968e-01	ci left: 3.478178e-04	ci right 3.847762e-04	k: 1526	n:4170000
SF3B2   4170000 perm   7369 sec   (566 perm/sec)   p_kst 3.659472e-04   p_cons 4.915348e-03   p_joint 1.486811e-05

Joint ci ratio: 4.938698e-01	ci left: 1.137204e-05	ci right 1.901460e-05	k: 62	n:4180000
Cons ci ratio: 2.728718e-02	ci left: 4.845876e-03	ci right 4.980170e-03	k: 20535	n:4180000
KS ci ratio: 1.001984e-01	ci left: 3.476854e-04	ci right 3.845914e-04	k: 1529	n:4180000
SF3B2   4180000 perm   7402 sec   (565 perm/sec)   p_kst 3.657895e-04   p_cons 4.912679e-03   p_joint 1.483254e-05

Joint ci ratio: 4.938698e-01	ci left: 1.134490e-05	ci right 1.896922e-05	k: 62	n:4190000
Cons ci ratio: 2.725269e-02	ci left: 4.846637e-03	ci right 4.980779e-03	k: 20587	n:4190000
KS ci ratio: 1.001330e-01	ci left: 3.473210e-04	ci right 3.841628e-04	k: 1531	n:4190000
SF3B2   4190000 perm   7435 sec   (564 perm/sec)   p_kst 3.653938e-04   p_cons 4.913365e-03   p_joint 1.479714e-05

Joint ci ratio: 4.862123e-01	ci left: 1.173521e-05	ci right 1.945867e-05	k: 64	n:4200000
Cons ci ratio: 2.721766e-02	ci left: 4.847630e-03	ci right 4.981625e-03	k: 20640	n:4200000
KS ci ratio: 9.996998e-02	ci left: 3.476547e-04	ci right 3.844684e-04	k: 1536	n:4200000
SF3B2   4200000 perm   7469 sec   (562 perm/sec)   p_kst 3.657143e-04   p_cons 4.914286e-03   p_joint 1.523810e-05

Joint ci ratio: 4.862123e-01	ci left: 1.170733e-05	ci right 1.941245e-05	k: 64	n:4210000
Cons ci ratio: 2.718542e-02	ci left: 4.847675e-03	ci right 4.981511e-03	k: 20689	n:4210000
KS ci ratio: 9.980775e-02	ci left: 3.479869e-04	ci right 3.847725e-04	k: 1541	n:4210000
SF3B2   4210000 perm   7503 sec   (561 perm/sec)   p_kst 3.660333e-04   p_cons 4.914252e-03   p_joint 1.520190e-05

Joint ci ratio: 4.862124e-01	ci left: 1.167959e-05	ci right 1.936645e-05	k: 64	n:4220000
Cons ci ratio: 2.714802e-02	ci left: 4.849603e-03	ci right 4.983305e-03	k: 20746	n:4220000
KS ci ratio: 9.977544e-02	ci left: 3.473934e-04	ci right 3.841036e-04	k: 1542	n:4220000
SF3B2   4220000 perm   7537 sec   (560 perm/sec)   p_kst 3.654028e-04   p_cons 4.916114e-03   p_joint 1.516588e-05

Joint ci ratio: 4.862124e-01	ci left: 1.165198e-05	ci right 1.932066e-05	k: 64	n:4230000
Cons ci ratio: 2.712520e-02	ci left: 4.846357e-03	ci right 4.979854e-03	k: 20781	n:4230000
KS ci ratio: 9.971086e-02	ci left: 3.470331e-04	ci right 3.836801e-04	k: 1544	n:4230000
SF3B2   4230000 perm   7571 sec   (559 perm/sec)   p_kst 3.650118e-04   p_cons 4.912766e-03   p_joint 1.513002e-05

Joint ci ratio: 4.862124e-01	ci left: 1.162450e-05	ci right 1.927509e-05	k: 64	n:4240000
Cons ci ratio: 2.710439e-02	ci left: 4.842422e-03	ci right 4.975708e-03	k: 20813	n:4240000
KS ci ratio: 9.967863e-02	ci left: 3.464446e-04	ci right 3.830169e-04	k: 1545	n:4240000
SF3B2   4240000 perm   7604 sec   (558 perm/sec)   p_kst 3.643868e-04   p_cons 4.908726e-03   p_joint 1.509434e-05

Joint ci ratio: 4.862124e-01	ci left: 1.159715e-05	ci right 1.922974e-05	k: 64	n:4250000
Cons ci ratio: 2.707319e-02	ci left: 4.842246e-03	ci right 4.975371e-03	k: 20861	n:4250000
KS ci ratio: 9.951782e-02	ci left: 3.467766e-04	ci right 3.833215e-04	k: 1550	n:4250000
SF3B2   4250000 perm   7637 sec   (557 perm/sec)   p_kst 3.647059e-04   p_cons 4.908471e-03   p_joint 1.505882e-05

Joint ci ratio: 4.862124e-01	ci left: 1.156992e-05	ci right 1.918460e-05	k: 64	n:4260000
Cons ci ratio: 2.703886e-02	ci left: 4.843236e-03	ci right 4.976217e-03	k: 20914	n:4260000
KS ci ratio: 9.935778e-02	ci left: 3.471071e-04	ci right 3.836246e-04	k: 1555	n:4260000
SF3B2   4260000 perm   7670 sec   (555 perm/sec)   p_kst 3.650235e-04   p_cons 4.909390e-03   p_joint 1.502347e-05

Joint ci ratio: 4.862124e-01	ci left: 1.154283e-05	ci right 1.913967e-05	k: 64	n:4270000
Cons ci ratio: 2.701566e-02	ci left: 4.840268e-03	ci right 4.973051e-03	k: 20950	n:4270000
KS ci ratio: 9.935783e-02	ci left: 3.462942e-04	ci right 3.827261e-04	k: 1555	n:4270000
SF3B2   4270000 perm   7704 sec   (554 perm/sec)   p_kst 3.641686e-04   p_cons 4.906323e-03   p_joint 1.498829e-05

Joint ci ratio: 4.862124e-01	ci left: 1.151586e-05	ci right 1.909495e-05	k: 64	n:4280000
Cons ci ratio: 2.698606e-02	ci left: 4.839634e-03	ci right 4.972252e-03	k: 20996	n:4280000
KS ci ratio: 9.929405e-02	ci left: 3.459408e-04	ci right 3.823108e-04	k: 1557	n:4280000
SF3B2   4280000 perm   7738 sec   (553 perm/sec)   p_kst 3.637850e-04   p_cons 4.905607e-03   p_joint 1.495327e-05

Joint ci ratio: 4.862124e-01	ci left: 1.148902e-05	ci right 1.905044e-05	k: 64	n:4290000
Cons ci ratio: 2.695012e-02	ci left: 4.841318e-03	ci right 4.973803e-03	k: 21052	n:4290000
KS ci ratio: 9.923040e-02	ci left: 3.455890e-04	ci right 3.818974e-04	k: 1559	n:4290000
SF3B2   4290000 perm   7773 sec   (552 perm/sec)   p_kst 3.634033e-04   p_cons 4.907226e-03   p_joint 1.491841e-05

Joint ci ratio: 4.825149e-01	ci left: 1.166644e-05	ci right 1.926690e-05	k: 65	n:4300000
Cons ci ratio: 2.691113e-02	ci left: 4.844150e-03	ci right 4.976518e-03	k: 21113	n:4300000
KS ci ratio: 9.904009e-02	ci left: 3.461461e-04	ci right 3.824392e-04	k: 1565	n:4300000
SF3B2   4300000 perm   7807 sec   (551 perm/sec)   p_kst 3.639535e-04   p_cons 4.910000e-03   p_joint 1.511628e-05

Joint ci ratio: 4.825149e-01	ci left: 1.163938e-05	ci right 1.922220e-05	k: 65	n:4310000
Cons ci ratio: 2.687230e-02	ci left: 4.846969e-03	ci right 4.979220e-03	k: 21174	n:4310000
KS ci ratio: 9.900852e-02	ci left: 3.455692e-04	ci right 3.817897e-04	k: 1566	n:4310000
SF3B2   4310000 perm   7841 sec   (550 perm/sec)   p_kst 3.633411e-04   p_cons 4.912761e-03   p_joint 1.508121e-05

Joint ci ratio: 4.825149e-01	ci left: 1.161243e-05	ci right 1.917770e-05	k: 65	n:4320000
Cons ci ratio: 2.684953e-02	ci left: 4.844026e-03	ci right 4.976083e-03	k: 21210	n:4320000
KS ci ratio: 9.894541e-02	ci left: 3.452208e-04	ci right 3.813803e-04	k: 1568	n:4320000
SF3B2   4320000 perm   7875 sec   (549 perm/sec)   p_kst 3.629630e-04   p_cons 4.909722e-03   p_joint 1.504630e-05

Joint ci ratio: 4.825149e-01	ci left: 1.158561e-05	ci right 1.913341e-05	k: 65	n:4330000
Cons ci ratio: 2.681413e-02	ci left: 4.845685e-03	ci right 4.977611e-03	k: 21266	n:4330000
KS ci ratio: 9.888243e-02	ci left: 3.448740e-04	ci right 3.809728e-04	k: 1570	n:4330000
SF3B2   4330000 perm   7910 sec   (547 perm/sec)   p_kst 3.625866e-04   p_cons 4.911316e-03   p_joint 1.501155e-05

Joint ci ratio: 4.789005e-01	ci left: 1.176140e-05	ci right 1.934747e-05	k: 66	n:4340000
Cons ci ratio: 2.678772e-02	ci left: 4.844133e-03	ci right 4.975884e-03	k: 21308	n:4340000
KS ci ratio: 9.853797e-02	ci left: 3.465514e-04	ci right 3.826921e-04	k: 1581	n:4340000
SF3B2   4340000 perm   7944 sec   (546 perm/sec)   p_kst 3.642857e-04   p_cons 4.909677e-03   p_joint 1.520737e-05

Joint ci ratio: 4.789005e-01	ci left: 1.173436e-05	ci right 1.930299e-05	k: 66	n:4350000
Cons ci ratio: 2.676327e-02	ci left: 4.841902e-03	ci right 4.973471e-03	k: 21347	n:4350000
KS ci ratio: 9.844468e-02	ci left: 3.464274e-04	ci right 3.825190e-04	k: 1584	n:4350000
SF3B2   4350000 perm   7979 sec   (545 perm/sec)   p_kst 3.641379e-04   p_cons 4.907356e-03   p_joint 1.517241e-05

Joint ci ratio: 4.789005e-01	ci left: 1.170745e-05	ci right 1.925872e-05	k: 66	n:4360000
Cons ci ratio: 2.672884e-02	ci left: 4.843327e-03	ci right 4.974763e-03	k: 21402	n:4360000
KS ci ratio: 9.825885e-02	ci left: 3.469751e-04	ci right 3.830517e-04	k: 1590	n:4360000
SF3B2   4360000 perm   8013 sec   (544 perm/sec)   p_kst 3.646789e-04   p_cons 4.908716e-03   p_joint 1.513761e-05

Joint ci ratio: 4.753661e-01	ci left: 1.188196e-05	ci right 1.947081e-05	k: 67	n:4370000
Cons ci ratio: 2.669454e-02	ci left: 4.844746e-03	ci right 4.976049e-03	k: 21457	n:4370000
KS ci ratio: 9.810480e-02	ci left: 3.472972e-04	ci right 3.833474e-04	k: 1595	n:4370000
SF3B2   4370000 perm   8047 sec   (543 perm/sec)   p_kst 3.649886e-04   p_cons 4.910069e-03   p_joint 1.533181e-05

Joint ci ratio: 4.753661e-01	ci left: 1.185483e-05	ci right 1.942636e-05	k: 67	n:4380000
Cons ci ratio: 2.666848e-02	ci left: 4.843210e-03	ci right 4.974341e-03	k: 21499	n:4380000
KS ci ratio: 9.807411e-02	ci left: 3.467270e-04	ci right 3.827060e-04	k: 1596	n:4380000
SF3B2   4380000 perm   8081 sec   (542 perm/sec)   p_kst 3.643836e-04   p_cons 4.908447e-03   p_joint 1.529680e-05

Joint ci ratio: 4.753661e-01	ci left: 1.182783e-05	ci right 1.938211e-05	k: 67	n:4390000
Cons ci ratio: 2.662883e-02	ci left: 4.846659e-03	ci right 4.977685e-03	k: 21563	n:4390000
KS ci ratio: 9.795151e-02	ci left: 3.468260e-04	ci right 3.827678e-04	k: 1600	n:4390000
SF3B2   4390000 perm   8115 sec   (541 perm/sec)   p_kst 3.644647e-04   p_cons 4.911845e-03   p_joint 1.526196e-05

Joint ci ratio: 4.753661e-01	ci left: 1.180095e-05	ci right 1.933806e-05	k: 67	n:4400000
Cons ci ratio: 2.660048e-02	ci left: 4.846029e-03	ci right 4.976897e-03	k: 21609	n:4400000
KS ci ratio: 9.782937e-02	ci left: 3.469246e-04	ci right 3.828292e-04	k: 1604	n:4400000
SF3B2   4400000 perm   8150 sec   (540 perm/sec)   p_kst 3.645455e-04   p_cons 4.911136e-03   p_joint 1.522727e-05

Joint ci ratio: 4.753661e-01	ci left: 1.177419e-05	ci right 1.929421e-05	k: 67	n:4410000
Cons ci ratio: 2.656729e-02	ci left: 4.847204e-03	ci right 4.977937e-03	k: 21663	n:4410000
KS ci ratio: 9.767733e-02	ci left: 3.472440e-04	ci right 3.831226e-04	k: 1609	n:4410000
SF3B2   4410000 perm   8184 sec   (539 perm/sec)   p_kst 3.648526e-04   p_cons 4.912245e-03   p_joint 1.519274e-05

Joint ci ratio: 4.753661e-01	ci left: 1.174755e-05	ci right 1.925056e-05	k: 67	n:4420000
Cons ci ratio: 2.653792e-02	ci left: 4.847025e-03	ci right 4.977607e-03	k: 21711	n:4420000
KS ci ratio: 9.761674e-02	ci left: 3.468998e-04	ci right 3.827193e-04	k: 1611	n:4420000
SF3B2   4420000 perm   8219 sec   (538 perm/sec)   p_kst 3.644796e-04   p_cons 4.911991e-03   p_joint 1.515837e-05

Joint ci ratio: 4.719088e-01	ci left: 1.191981e-05	ci right 1.945960e-05	k: 68	n:4430000
Cons ci ratio: 2.650863e-02	ci left: 4.846847e-03	ci right 4.977278e-03	k: 21759	n:4430000
KS ci ratio: 9.743555e-02	ci left: 3.474381e-04	ci right 3.832428e-04	k: 1617	n:4430000
SF3B2   4430000 perm   8253 sec   (537 perm/sec)   p_kst 3.650113e-04   p_cons 4.911738e-03   p_joint 1.534989e-05

Joint ci ratio: 4.719088e-01	ci left: 1.189296e-05	ci right 1.941577e-05	k: 68	n:4440000
Cons ci ratio: 2.648433e-02	ci left: 4.844880e-03	ci right 4.975136e-03	k: 21799	n:4440000
KS ci ratio: 9.737540e-02	ci left: 3.470951e-04	ci right 3.828411e-04	k: 1619	n:4440000
SF3B2   4440000 perm   8288 sec   (536 perm/sec)   p_kst 3.646396e-04   p_cons 4.909685e-03   p_joint 1.531532e-05

Joint ci ratio: 4.719088e-01	ci left: 1.186623e-05	ci right 1.937214e-05	k: 68	n:4450000
Cons ci ratio: 2.644914e-02	ci left: 4.846940e-03	ci right 4.977076e-03	k: 21857	n:4450000
KS ci ratio: 9.725540e-02	ci left: 3.471921e-04	ci right 3.829015e-04	k: 1623	n:4450000
SF3B2   4450000 perm   8323 sec   (535 perm/sec)   p_kst 3.647191e-04   p_cons 4.911685e-03   p_joint 1.528090e-05

Joint ci ratio: 4.719088e-01	ci left: 1.183963e-05	ci right 1.932871e-05	k: 68	n:4460000
Cons ci ratio: 2.642258e-02	ci left: 4.845873e-03	ci right 4.975848e-03	k: 21901	n:4460000
KS ci ratio: 9.722550e-02	ci left: 3.466324e-04	ci right 3.822727e-04	k: 1624	n:4460000
SF3B2   4460000 perm   8359 sec   (534 perm/sec)   p_kst 3.641256e-04   p_cons 4.910538e-03   p_joint 1.524664e-05

Joint ci ratio: 4.719088e-01	ci left: 1.181314e-05	ci right 1.928546e-05	k: 68	n:4470000
Cons ci ratio: 2.640032e-02	ci left: 4.843255e-03	ci right 4.973048e-03	k: 21938	n:4470000
KS ci ratio: 9.716575e-02	ci left: 3.462935e-04	ci right 3.818758e-04	k: 1626	n:4470000
SF3B2   4470000 perm   8394 sec   (533 perm/sec)   p_kst 3.637584e-04   p_cons 4.907830e-03   p_joint 1.521253e-05

Joint ci ratio: 4.719089e-01	ci left: 1.178677e-05	ci right 1.924242e-05	k: 68	n:4480000
Cons ci ratio: 2.637149e-02	ci left: 4.843087e-03	ci right 4.972732e-03	k: 21986	n:4480000
KS ci ratio: 9.692769e-02	ci left: 3.472629e-04	ci right 3.828524e-04	k: 1634	n:4480000
SF3B2   4480000 perm   8429 sec   (531 perm/sec)   p_kst 3.647321e-04   p_cons 4.907589e-03   p_joint 1.517857e-05

Joint ci ratio: 4.719089e-01	ci left: 1.176052e-05	ci right 1.919956e-05	k: 68	n:4490000
Cons ci ratio: 2.634516e-02	ci left: 4.842036e-03	ci right 4.971521e-03	k: 22030	n:4490000
KS ci ratio: 9.680934e-02	ci left: 3.473587e-04	ci right 3.829122e-04	k: 1638	n:4490000
SF3B2   4490000 perm   8464 sec   (530 perm/sec)   p_kst 3.648107e-04   p_cons 4.906459e-03   p_joint 1.514477e-05

Joint ci ratio: 4.719089e-01	ci left: 1.173439e-05	ci right 1.915690e-05	k: 68	n:4500000
Cons ci ratio: 2.631531e-02	ci left: 4.842314e-03	ci right 4.971658e-03	k: 22080	n:4500000
KS ci ratio: 9.677985e-02	ci left: 3.468037e-04	ci right 3.822888e-04	k: 1639	n:4500000
SF3B2   4500000 perm   8500 sec   (529 perm/sec)   p_kst 3.642222e-04   p_cons 4.906667e-03   p_joint 1.511111e-05

Joint ci ratio: 4.719089e-01	ci left: 1.170837e-05	ci right 1.911442e-05	k: 68	n:4510000
Cons ci ratio: 2.628437e-02	ci left: 4.843031e-03	ci right 4.972240e-03	k: 22132	n:4510000
KS ci ratio: 9.669146e-02	ci left: 3.466838e-04	ci right 3.821225e-04	k: 1642	n:4510000
SF3B2   4510000 perm   8536 sec   (528 perm/sec)   p_kst 3.640798e-04   p_cons 4.907317e-03   p_joint 1.507761e-05

Joint ci ratio: 4.719089e-01	ci left: 1.168247e-05	ci right 1.907213e-05	k: 68	n:4520000
Cons ci ratio: 2.624760e-02	ci left: 4.845943e-03	ci right 4.975046e-03	k: 22194	n:4520000
KS ci ratio: 9.663268e-02	ci left: 3.463486e-04	ci right 3.817302e-04	k: 1644	n:4520000
SF3B2   4520000 perm   8571 sec   (527 perm/sec)   p_kst 3.637168e-04   p_cons 4.910177e-03   p_joint 1.504425e-05

Joint ci ratio: 4.719089e-01	ci left: 1.165668e-05	ci right 1.903003e-05	k: 68	n:4530000
Cons ci ratio: 2.621689e-02	ci left: 4.846650e-03	ci right 4.975618e-03	k: 22246	n:4530000
KS ci ratio: 9.648614e-02	ci left: 3.466611e-04	ci right 3.820180e-04	k: 1649	n:4530000
SF3B2   4530000 perm   8607 sec   (526 perm/sec)   p_kst 3.640177e-04   p_cons 4.910817e-03   p_joint 1.501104e-05

Joint ci ratio: 4.719089e-01	ci left: 1.163100e-05	ci right 1.898811e-05	k: 68	n:4540000
Cons ci ratio: 2.619102e-02	ci left: 4.845602e-03	ci right 4.974414e-03	k: 22290	n:4540000
KS ci ratio: 9.622401e-02	ci left: 3.478322e-04	ci right 3.832066e-04	k: 1658	n:4540000
SF3B2   4540000 perm   8643 sec   (525 perm/sec)   p_kst 3.651982e-04   p_cons 4.909692e-03   p_joint 1.497797e-05

Joint ci ratio: 4.719089e-01	ci left: 1.160544e-05	ci right 1.894638e-05	k: 68	n:4550000
Cons ci ratio: 2.616228e-02	ci left: 4.845651e-03	ci right 4.974321e-03	k: 22339	n:4550000
KS ci ratio: 9.602161e-02	ci left: 3.485692e-04	ci right 3.839399e-04	k: 1665	n:4550000
SF3B2   4550000 perm   8679 sec   (524 perm/sec)   p_kst 3.659341e-04   p_cons 4.909670e-03   p_joint 1.494505e-05

Joint ci ratio: 4.685260e-01	ci left: 1.177329e-05	ci right 1.914994e-05	k: 69	n:4560000
Cons ci ratio: 2.613481e-02	ci left: 4.845264e-03	ci right 4.973786e-03	k: 22386	n:4560000
KS ci ratio: 9.593528e-02	ci left: 3.484469e-04	ci right 3.837716e-04	k: 1668	n:4560000
SF3B2   4560000 perm   8715 sec   (523 perm/sec)   p_kst 3.657895e-04   p_cons 4.909211e-03   p_joint 1.513158e-05

Joint ci ratio: 4.685260e-01	ci left: 1.174753e-05	ci right 1.910804e-05	k: 69	n:4570000
Cons ci ratio: 2.611211e-02	ci left: 4.843140e-03	ci right 4.971493e-03	k: 22425	n:4570000
KS ci ratio: 9.587787e-02	ci left: 3.481115e-04	ci right 3.833799e-04	k: 1670	n:4570000
SF3B2   4570000 perm   8752 sec   (522 perm/sec)   p_kst 3.654267e-04   p_cons 4.907002e-03   p_joint 1.509847e-05

Joint ci ratio: 4.685260e-01	ci left: 1.172188e-05	ci right 1.906632e-05	k: 69	n:4580000
Cons ci ratio: 2.608363e-02	ci left: 4.843195e-03	ci right 4.971406e-03	k: 22474	n:4580000
KS ci ratio: 9.584922e-02	ci left: 3.475646e-04	ci right 3.827664e-04	k: 1671	n:4580000
SF3B2   4580000 perm   8787 sec   (521 perm/sec)   p_kst 3.648472e-04   p_cons 4.906987e-03   p_joint 1.506550e-05

Joint ci ratio: 4.685260e-01	ci left: 1.169634e-05	ci right 1.902478e-05	k: 69	n:4590000
Cons ci ratio: 2.604827e-02	ci left: 4.845846e-03	ci right 4.973952e-03	k: 22535	n:4590000
KS ci ratio: 9.573477e-02	ci left: 3.476579e-04	ci right 3.828249e-04	k: 1675	n:4590000
SF3B2   4590000 perm   8824 sec   (520 perm/sec)   p_kst 3.649237e-04   p_cons 4.909586e-03   p_joint 1.503268e-05

Joint ci ratio: 4.685260e-01	ci left: 1.167091e-05	ci right 1.898342e-05	k: 69	n:4600000
Cons ci ratio: 2.601536e-02	ci left: 4.847622e-03	ci right 4.975611e-03	k: 22592	n:4600000
KS ci ratio: 9.553544e-02	ci left: 3.483875e-04	ci right 3.835507e-04	k: 1682	n:4600000
SF3B2   4600000 perm   8859 sec   (519 perm/sec)   p_kst 3.656522e-04   p_cons 4.911304e-03   p_joint 1.500000e-05

Joint ci ratio: 4.685260e-01	ci left: 1.164560e-05	ci right 1.894224e-05	k: 69	n:4610000
Cons ci ratio: 2.598201e-02	ci left: 4.849607e-03	ci right 4.977481e-03	k: 22650	n:4610000
KS ci ratio: 9.539383e-02	ci left: 3.486905e-04	ci right 3.838292e-04	k: 1687	n:4610000
SF3B2   4610000 perm   8896 sec   (518 perm/sec)   p_kst 3.659436e-04   p_cons 4.913232e-03   p_joint 1.496746e-05

Joint ci ratio: 4.685260e-01	ci left: 1.162039e-05	ci right 1.890124e-05	k: 69	n:4620000
Cons ci ratio: 2.596028e-02	ci left: 4.847281e-03	ci right 4.974985e-03	k: 22688	n:4620000
KS ci ratio: 9.533738e-02	ci left: 3.483583e-04	ci right 3.834417e-04	k: 1689	n:4620000
SF3B2   4620000 perm   8932 sec   (517 perm/sec)   p_kst 3.655844e-04   p_cons 4.910823e-03   p_joint 1.493506e-05

Joint ci ratio: 4.685260e-01	ci left: 1.159529e-05	ci right 1.886042e-05	k: 69	n:4630000
Cons ci ratio: 2.592885e-02	ci left: 4.848614e-03	ci right 4.976196e-03	k: 22743	n:4630000
KS ci ratio: 9.522475e-02	ci left: 3.484493e-04	ci right 3.834980e-04	k: 1693	n:4630000
SF3B2   4630000 perm   8969 sec   (516 perm/sec)   p_kst 3.656587e-04   p_cons 4.912095e-03   p_joint 1.490281e-05

Joint ci ratio: 4.685260e-01	ci left: 1.157030e-05	ci right 1.881977e-05	k: 69	n:4640000
Cons ci ratio: 2.589868e-02	ci left: 4.849513e-03	ci right 4.976968e-03	k: 22796	n:4640000
KS ci ratio: 9.514055e-02	ci left: 3.483295e-04	ci right 3.833334e-04	k: 1696	n:4640000
SF3B2   4640000 perm   9006 sec   (515 perm/sec)   p_kst 3.655172e-04   p_cons 4.912931e-03   p_joint 1.487069e-05

Joint ci ratio: 4.685260e-01	ci left: 1.154542e-05	ci right 1.877930e-05	k: 69	n:4650000
Cons ci ratio: 2.587602e-02	ci left: 4.847630e-03	ci right 4.974923e-03	k: 22836	n:4650000
KS ci ratio: 9.505657e-02	ci left: 3.482102e-04	ci right 3.831696e-04	k: 1699	n:4650000
SF3B2   4650000 perm   9043 sec   (514 perm/sec)   p_kst 3.653763e-04   p_cons 4.910968e-03   p_joint 1.483871e-05

Joint ci ratio: 4.685260e-01	ci left: 1.152064e-05	ci right 1.873900e-05	k: 69	n:4660000
Cons ci ratio: 2.584717e-02	ci left: 4.848101e-03	ci right 4.975262e-03	k: 22887	n:4660000
KS ci ratio: 9.488925e-02	ci left: 3.487199e-04	ci right 3.836654e-04	k: 1705	n:4660000
SF3B2   4660000 perm   9081 sec   (513 perm/sec)   p_kst 3.658798e-04   p_cons 4.911373e-03   p_joint 1.480687e-05

Joint ci ratio: 4.685261e-01	ci left: 1.149597e-05	ci right 1.869887e-05	k: 69	n:4670000
Cons ci ratio: 2.582237e-02	ci left: 4.847081e-03	ci right 4.974091e-03	k: 22931	n:4670000
KS ci ratio: 9.475049e-02	ci left: 3.490185e-04	ci right 3.839399e-04	k: 1710	n:4670000
SF3B2   4670000 perm   9119 sec   (512 perm/sec)   p_kst 3.661670e-04   p_cons 4.910278e-03   p_joint 1.477516e-05

Joint ci ratio: 4.685261e-01	ci left: 1.147141e-05	ci right 1.865892e-05	k: 69	n:4680000
Cons ci ratio: 2.579032e-02	ci left: 4.848825e-03	ci right 4.975721e-03	k: 22988	n:4680000
KS ci ratio: 9.466754e-02	ci left: 3.488986e-04	ci right 3.837757e-04	k: 1713	n:4680000
SF3B2   4680000 perm   9156 sec   (511 perm/sec)   p_kst 3.660256e-04   p_cons 4.911966e-03   p_joint 1.474359e-05

Joint ci ratio: 4.685261e-01	ci left: 1.144695e-05	ci right 1.861914e-05	k: 69	n:4690000
Cons ci ratio: 2.576569e-02	ci left: 4.847807e-03	ci right 4.974554e-03	k: 23032	n:4690000
KS ci ratio: 9.450225e-02	ci left: 3.494037e-04	ci right 3.842670e-04	k: 1719	n:4690000
SF3B2   4690000 perm   9193 sec   (510 perm/sec)   p_kst 3.665245e-04   p_cons 4.910874e-03   p_joint 1.471215e-05

Joint ci ratio: 4.685261e-01	ci left: 1.142260e-05	ci right 1.857952e-05	k: 69	n:4700000
Cons ci ratio: 2.573328e-02	ci left: 4.849754e-03	ci right 4.976389e-03	k: 23090	n:4700000
KS ci ratio: 9.436518e-02	ci left: 3.496990e-04	ci right 3.845384e-04	k: 1724	n:4700000
SF3B2   4700000 perm   9231 sec   (509 perm/sec)   p_kst 3.668085e-04   p_cons 4.912766e-03   p_joint 1.468085e-05

Joint ci ratio: 4.685261e-01	ci left: 1.139834e-05	ci right 1.854007e-05	k: 69	n:4710000
Cons ci ratio: 2.569988e-02	ci left: 4.852114e-03	ci right 4.978644e-03	k: 23150	n:4710000
KS ci ratio: 9.422870e-02	ci left: 3.499931e-04	ci right 3.848085e-04	k: 1729	n:4710000
SF3B2   4710000 perm   9268 sec   (508 perm/sec)   p_kst 3.670913e-04   p_cons 4.915074e-03   p_joint 1.464968e-05

Joint ci ratio: 4.685261e-01	ci left: 1.137419e-05	ci right 1.850079e-05	k: 69	n:4720000
Cons ci ratio: 2.567162e-02	ci left: 4.852570e-03	ci right 4.978971e-03	k: 23201	n:4720000
KS ci ratio: 9.411995e-02	ci left: 3.500791e-04	ci right 3.848607e-04	k: 1733	n:4720000
SF3B2   4720000 perm   9306 sec   (507 perm/sec)   p_kst 3.671610e-04   p_cons 4.915466e-03   p_joint 1.461864e-05

Joint ci ratio: 4.685261e-01	ci left: 1.135015e-05	ci right 1.846168e-05	k: 69	n:4730000
Cons ci ratio: 2.564566e-02	ci left: 4.852184e-03	ci right 4.978445e-03	k: 23248	n:4730000
KS ci ratio: 9.398453e-02	ci left: 3.503712e-04	ci right 3.851290e-04	k: 1738	n:4730000
SF3B2   4730000 perm   9343 sec   (506 perm/sec)   p_kst 3.674419e-04   p_cons 4.915011e-03   p_joint 1.458774e-05

Joint ci ratio: 4.685261e-01	ci left: 1.132620e-05	ci right 1.842273e-05	k: 69	n:4740000
Cons ci ratio: 2.561592e-02	ci left: 4.853266e-03	ci right 4.979407e-03	k: 23302	n:4740000
KS ci ratio: 9.393055e-02	ci left: 3.500440e-04	ci right 3.847483e-04	k: 1740	n:4740000
SF3B2   4740000 perm   9381 sec   (505 perm/sec)   p_kst 3.670886e-04   p_cons 4.916034e-03   p_joint 1.455696e-05

Joint ci ratio: 4.685261e-01	ci left: 1.130236e-05	ci right 1.838395e-05	k: 69	n:4750000
Cons ci ratio: 2.559564e-02	ci left: 4.850788e-03	ci right 4.976764e-03	k: 23339	n:4750000
KS ci ratio: 9.384973e-02	ci left: 3.499238e-04	ci right 3.845847e-04	k: 1743	n:4750000
SF3B2   4750000 perm   9420 sec   (504 perm/sec)   p_kst 3.669474e-04   p_cons 4.913474e-03   p_joint 1.452632e-05

Joint ci ratio: 4.685261e-01	ci left: 1.127861e-05	ci right 1.834533e-05	k: 69	n:4760000
Cons ci ratio: 2.556826e-02	ci left: 4.851035e-03	ci right 4.976880e-03	k: 23389	n:4760000
KS ci ratio: 9.379598e-02	ci left: 3.495990e-04	ci right 3.842068e-04	k: 1745	n:4760000
SF3B2   4760000 perm   9458 sec   (503 perm/sec)   p_kst 3.665966e-04   p_cons 4.913655e-03   p_joint 1.449580e-05

Joint ci ratio: 4.652149e-01	ci left: 1.143994e-05	ci right 1.854101e-05	k: 70	n:4770000
Cons ci ratio: 2.553988e-02	ci left: 4.851697e-03	ci right 4.977417e-03	k: 23441	n:4770000
KS ci ratio: 9.371551e-02	ci left: 3.494803e-04	ci right 3.840450e-04	k: 1748	n:4770000
SF3B2   4770000 perm   9497 sec   (502 perm/sec)   p_kst 3.664570e-04   p_cons 4.914256e-03   p_joint 1.467505e-05

Joint ci ratio: 4.652149e-01	ci left: 1.141601e-05	ci right 1.850222e-05	k: 70	n:4780000
Cons ci ratio: 2.551160e-02	ci left: 4.852356e-03	ci right 4.977952e-03	k: 23493	n:4780000
KS ci ratio: 9.366199e-02	ci left: 3.491577e-04	ci right 3.836698e-04	k: 1750	n:4780000
SF3B2   4780000 perm   9536 sec   (501 perm/sec)   p_kst 3.661088e-04   p_cons 4.914854e-03   p_joint 1.464435e-05

Joint ci ratio: 4.652149e-01	ci left: 1.139217e-05	ci right 1.846359e-05	k: 70	n:4790000
Cons ci ratio: 2.548503e-02	ci left: 4.852390e-03	ci right 4.977855e-03	k: 23542	n:4790000
KS ci ratio: 9.358187e-02	ci left: 3.490405e-04	ci right 3.835098e-04	k: 1753	n:4790000
SF3B2   4790000 perm   9575 sec   (500 perm/sec)   p_kst 3.659708e-04   p_cons 4.914823e-03   p_joint 1.461378e-05

Joint ci ratio: 4.652149e-01	ci left: 1.136844e-05	ci right 1.842513e-05	k: 70	n:4800000
Cons ci ratio: 2.546127e-02	ci left: 4.851389e-03	ci right 4.976709e-03	k: 23586	n:4800000
KS ci ratio: 9.352857e-02	ci left: 3.487202e-04	ci right 3.831372e-04	k: 1755	n:4800000
SF3B2   4800000 perm   9614 sec   (499 perm/sec)   p_kst 3.656250e-04   p_cons 4.913750e-03   p_joint 1.458333e-05

Joint ci ratio: 4.652149e-01	ci left: 1.134481e-05	ci right 1.838682e-05	k: 70	n:4810000
Cons ci ratio: 2.543486e-02	ci left: 4.851426e-03	ci right 4.976614e-03	k: 23635	n:4810000
KS ci ratio: 9.344879e-02	ci left: 3.486043e-04	ci right 3.829789e-04	k: 1758	n:4810000
SF3B2   4810000 perm   9653 sec   (498 perm/sec)   p_kst 3.654886e-04   p_cons 4.913721e-03   p_joint 1.455301e-05

Joint ci ratio: 4.652149e-01	ci left: 1.132127e-05	ci right 1.834868e-05	k: 70	n:4820000
Cons ci ratio: 2.540908e-02	ci left: 4.851256e-03	ci right 4.976311e-03	k: 23683	n:4820000
KS ci ratio: 9.328979e-02	ci left: 3.490968e-04	ci right 3.834582e-04	k: 1764	n:4820000
SF3B2   4820000 perm   9692 sec   (497 perm/sec)   p_kst 3.659751e-04   p_cons 4.913485e-03   p_joint 1.452282e-05

Joint ci ratio: 4.619729e-01	ci left: 1.148068e-05	ci right 1.854175e-05	k: 71	n:4830000
Cons ci ratio: 2.538498e-02	ci left: 4.850469e-03	ci right 4.975384e-03	k: 23728	n:4830000
KS ci ratio: 9.321062e-02	ci left: 3.489807e-04	ci right 3.832999e-04	k: 1767	n:4830000
SF3B2   4830000 perm   9731 sec   (496 perm/sec)   p_kst 3.658385e-04   p_cons 4.912629e-03   p_joint 1.469979e-05

Joint ci ratio: 4.619729e-01	ci left: 1.145696e-05	ci right 1.850344e-05	k: 71	n:4840000
Cons ci ratio: 2.536096e-02	ci left: 4.849686e-03	ci right 4.974461e-03	k: 23773	n:4840000
KS ci ratio: 9.315796e-02	ci left: 3.486633e-04	ci right 3.829308e-04	k: 1769	n:4840000
SF3B2   4840000 perm   9769 sec   (495 perm/sec)   p_kst 3.654959e-04   p_cons 4.911777e-03   p_joint 1.466942e-05

Joint ci ratio: 4.619730e-01	ci left: 1.143333e-05	ci right 1.846529e-05	k: 71	n:4850000
Cons ci ratio: 2.533753e-02	ci left: 4.848701e-03	ci right 4.973334e-03	k: 23817	n:4850000
KS ci ratio: 9.313168e-02	ci left: 3.481457e-04	ci right 3.823523e-04	k: 1770	n:4850000
SF3B2   4850000 perm   9809 sec   (494 perm/sec)   p_kst 3.649485e-04   p_cons 4.910722e-03   p_joint 1.463918e-05

Joint ci ratio: 4.619730e-01	ci left: 1.140981e-05	ci right 1.842730e-05	k: 71	n:4860000
Cons ci ratio: 2.531738e-02	ci left: 4.846494e-03	ci right 4.970970e-03	k: 23855	n:4860000
KS ci ratio: 9.305291e-02	ci left: 3.480323e-04	ci right 3.821972e-04	k: 1773	n:4860000
SF3B2   4860000 perm   9847 sec   (494 perm/sec)   p_kst 3.648148e-04   p_cons 4.908436e-03   p_joint 1.460905e-05

Joint ci ratio: 4.619730e-01	ci left: 1.138638e-05	ci right 1.838946e-05	k: 71	n:4870000
Cons ci ratio: 2.528716e-02	ci left: 4.848172e-03	ci right 4.972540e-03	k: 23912	n:4870000
KS ci ratio: 9.302671e-02	ci left: 3.475182e-04	ci right 3.816225e-04	k: 1774	n:4870000
SF3B2   4870000 perm   9886 sec   (493 perm/sec)   p_kst 3.642710e-04   p_cons 4.910062e-03   p_joint 1.457906e-05

Joint ci ratio: 4.619730e-01	ci left: 1.136305e-05	ci right 1.835178e-05	k: 71	n:4880000
Cons ci ratio: 2.526130e-02	ci left: 4.848215e-03	ci right 4.972455e-03	k: 23961	n:4880000
KS ci ratio: 9.292207e-02	ci left: 3.476067e-04	ci right 3.816792e-04	k: 1778	n:4880000
SF3B2   4880000 perm   9927 sec   (492 perm/sec)   p_kst 3.643443e-04   p_cons 4.910041e-03   p_joint 1.454918e-05

Joint ci ratio: 4.619730e-01	ci left: 1.133981e-05	ci right 1.831425e-05	k: 71	n:4890000
Cons ci ratio: 2.523181e-02	ci left: 4.849680e-03	ci right 4.973811e-03	k: 24017	n:4890000
KS ci ratio: 9.276574e-02	ci left: 3.480944e-04	ci right 3.821542e-04	k: 1784	n:4890000
SF3B2   4890000 perm   9966 sec   (491 perm/sec)   p_kst 3.648262e-04   p_cons 4.911452e-03   p_joint 1.451943e-05

Joint ci ratio: 4.619730e-01	ci left: 1.131667e-05	ci right 1.827687e-05	k: 71	n:4900000
Cons ci ratio: 2.520716e-02	ci left: 4.849314e-03	ci right 4.973313e-03	k: 24064	n:4900000
KS ci ratio: 9.276578e-02	ci left: 3.473840e-04	ci right 3.813743e-04	k: 1784	n:4900000
SF3B2   4900000 perm   10006 sec   (490 perm/sec)   p_kst 3.640816e-04   p_cons 4.911020e-03   p_joint 1.448980e-05

Joint ci ratio: 4.619730e-01	ci left: 1.129362e-05	ci right 1.823965e-05	k: 71	n:4910000
Cons ci ratio: 2.518259e-02	ci left: 4.848950e-03	ci right 4.972816e-03	k: 24111	n:4910000
KS ci ratio: 9.268793e-02	ci left: 3.472733e-04	ci right 3.812227e-04	k: 1787	n:4910000
SF3B2   4910000 perm   10045 sec   (489 perm/sec)   p_kst 3.639511e-04   p_cons 4.910591e-03   p_joint 1.446029e-05

Joint ci ratio: 4.619730e-01	ci left: 1.127066e-05	ci right 1.820258e-05	k: 71	n:4920000
Cons ci ratio: 2.515547e-02	ci left: 4.849597e-03	ci right 4.973344e-03	k: 24163	n:4920000
KS ci ratio: 9.258442e-02	ci left: 3.473616e-04	ci right 3.812797e-04	k: 1791	n:4920000
SF3B2   4920000 perm   10084 sec   (488 perm/sec)   p_kst 3.640244e-04   p_cons 4.911179e-03   p_joint 1.443089e-05

Joint ci ratio: 4.619730e-01	ci left: 1.124780e-05	ci right 1.816565e-05	k: 71	n:4930000
Cons ci ratio: 2.513314e-02	ci left: 4.848427e-03	ci right 4.972033e-03	k: 24206	n:4930000
KS ci ratio: 9.248126e-02	ci left: 3.474496e-04	ci right 3.813364e-04	k: 1795	n:4930000
SF3B2   4930000 perm   10123 sec   (487 perm/sec)   p_kst 3.640974e-04   p_cons 4.909939e-03   p_joint 1.440162e-05

Joint ci ratio: 4.619730e-01	ci left: 1.122503e-05	ci right 1.812888e-05	k: 71	n:4940000
Cons ci ratio: 2.511294e-02	ci left: 4.846458e-03	ci right 4.969913e-03	k: 24245	n:4940000
KS ci ratio: 9.232714e-02	ci left: 3.479328e-04	ci right 3.818071e-04	k: 1801	n:4940000
SF3B2   4940000 perm   10162 sec   (486 perm/sec)   p_kst 3.645749e-04   p_cons 4.907895e-03   p_joint 1.437247e-05

Joint ci ratio: 4.619730e-01	ci left: 1.120236e-05	ci right 1.809226e-05	k: 71	n:4950000
Cons ci ratio: 2.509072e-02	ci left: 4.845299e-03	ci right 4.968614e-03	k: 24288	n:4950000
KS ci ratio: 9.219931e-02	ci left: 3.482167e-04	ci right 3.820692e-04	k: 1806	n:4950000
SF3B2   4950000 perm   10202 sec   (485 perm/sec)   p_kst 3.648485e-04   p_cons 4.906667e-03   p_joint 1.434343e-05

Joint ci ratio: 4.619730e-01	ci left: 1.117977e-05	ci right 1.805578e-05	k: 71	n:4960000
Cons ci ratio: 2.506234e-02	ci left: 4.846550e-03	ci right 4.969755e-03	k: 24343	n:4960000
KS ci ratio: 9.217383e-02	ci left: 3.477116e-04	ci right 3.815052e-04	k: 1807	n:4960000
SF3B2   4960000 perm   10242 sec   (484 perm/sec)   p_kst 3.643145e-04   p_cons 4.907863e-03   p_joint 1.431452e-05

Joint ci ratio: 4.619730e-01	ci left: 1.115728e-05	ci right 1.801945e-05	k: 71	n:4970000
Cons ci ratio: 2.503716e-02	ci left: 4.846596e-03	ci right 4.969676e-03	k: 24392	n:4970000
KS ci ratio: 9.209746e-02	ci left: 3.476017e-04	ci right 3.813551e-04	k: 1810	n:4970000
SF3B2   4970000 perm   10282 sec   (483 perm/sec)   p_kst 3.641851e-04   p_cons 4.907847e-03   p_joint 1.428571e-05

Joint ci ratio: 4.619730e-01	ci left: 1.113487e-05	ci right 1.798327e-05	k: 71	n:4980000
Cons ci ratio: 2.501256e-02	ci left: 4.846442e-03	ci right 4.969396e-03	k: 24440	n:4980000
KS ci ratio: 9.204666e-02	ci left: 3.472961e-04	ci right 3.810002e-04	k: 1812	n:4980000
SF3B2   4980000 perm   10323 sec   (482 perm/sec)   p_kst 3.638554e-04   p_cons 4.907631e-03   p_joint 1.425703e-05

Joint ci ratio: 4.619731e-01	ci left: 1.111256e-05	ci right 1.794723e-05	k: 71	n:4990000
Cons ci ratio: 2.498907e-02	ci left: 4.845890e-03	ci right 4.968713e-03	k: 24486	n:4990000
KS ci ratio: 9.199595e-02	ci left: 3.469916e-04	ci right 3.806467e-04	k: 1814	n:4990000
SF3B2   4990000 perm   10364 sec   (481 perm/sec)   p_kst 3.635271e-04   p_cons 4.907014e-03   p_joint 1.422846e-05

Joint ci ratio: 4.587979e-01	ci left: 1.126713e-05	ci right 1.813438e-05	k: 72	n:5000000
Cons ci ratio: 2.496564e-02	ci left: 4.845341e-03	ci right 4.968033e-03	k: 24532	n:5000000
KS ci ratio: 9.186948e-02	ci left: 3.472747e-04	ci right 3.809083e-04	k: 1819	n:5000000
SF3B2   5000000 perm   10403 sec   (481 perm/sec)   p_kst 3.638000e-04   p_cons 4.906400e-03   p_joint 1.440000e-05

Outputting figure to mutsig2_images.part000000000155/SF3B2.2_2776_5000000_0.0003638_0.0049064_1.44e-05.png
                gene_name: SF3B2
               theta_stop: 0.46 
                    nperm: 5000000 
                     p_ks: 0.00036 
        ci_ks_bounds_left: 0.00035 
       ci_ks_bounds_right: 0.00038 
                   p_cons: 0.0049 
      ci_cons_bounds_left: 0.0048 
     ci_cons_bounds_right: 0.0050 
                  p_joint: 1.44e-05 
     ci_joint_bounds_left: 1.13e-05 
    ci_joint_bounds_right: 1.81e-05 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000155
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 155 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1699>
Subject: Job 8704345: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1699>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000156> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 19:38:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000156.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000156.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 156  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000156.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    173.76 sec.
    Max Memory :      5521 MB
    Max Swap   :      8273 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
156
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 156
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 156: processing genes 14023 - 14113
Calculating significance of each gene.
Using projection method.
14023	SF4	1
14024	SFI1	1
14025	SFMBT1	1
14026	SFMBT2	2.941394e-01
14027	SFN	1
14028	SFPQ	1
14029	SFRP1	1
14030	SFRP2	1
14031	SFRP4	1
14032	SFRP5	1
14033	SFRS1	1
In gene SFRS11 the following bins exceed PROBCAP:
    THCA-ET-A2MZ-TP	categ 6	N = 1503    n = 1	mu =   3.48e-08
14034	SFRS11	7.466455e-03
14035	SFRS12	1
14036	SFRS12IP1	1
14037	SFRS13B	1
14038	SFRS14	1
14039	SFRS15	1.130338e-01
14040	SFRS16	1
14041	SFRS17A	1
14042	SFRS18	1
14043	SFRS2	7.521333e-02
14044	SFRS2B	1
14045	SFRS2IP	2.454285e-01
14046	SFRS3	1
14047	SFRS4	1
14048	SFRS5	1
14049	SFRS6	1
14050	SFRS7	1
14051	SFRS8	1
14052	SFRS9	1
14053	SFT2D1	1
14054	SFT2D2	1
14055	SFTA2	1
14056	SFTA3	1
14057	SFTPA1	1
14058	SFTPA2	1
14059	SFTPB	1
14060	SFTPC	1
14061	SFTPD	1
14062	SFXN1	1
14063	SFXN2	1
14064	SFXN3	1
14065	SFXN4	1
14066	SFXN5	1
14067	SGCA	1
14068	SGCB	1
14069	SGCD	1
14070	SGCE	1
14071	SGCG	1
14072	SGCZ	1
14073	SGEF	1
14074	SGIP1	1
14075	SGK1	1
14076	SGK196	2.705499e-02
14077	SGK2	1
14078	SGK223	3.596414e-03
14079	SGK269	2.323703e-01
14080	SGK3	1
14081	SGK494	1
14082	SGMS1	1
14083	SGMS2	1
14084	SGOL1	1
14085	SGOL2	1
14086	SGPL1	1
14087	SGPP1	1
14088	SGPP2	1
14089	SGSH	1
14090	SGSM1	1
14091	SGSM2	1
14092	SGSM3	3.081215e-01
14093	SGTA	1
14094	SGTB	1
14095	SH2B1	1
14096	SH2B2	1
14097	SH2B3	1
14098	SH2D1A	1
14099	SH2D1B	1
14100	SH2D2A	1
14101	SH2D3A	1
14102	SH2D3C	3.023441e-01
14103	SH2D4A	5.581762e-02
14104	SH2D4B	1
14105	SH2D5	1
14106	SH2D6	7.092742e-04
14107	SH2D7	1
14108	SH3BGR	1
14109	SH3BGRL	1
14110	SH3BGRL2	1
14111	SH3BGRL3	1
14112	SH3BP1	1
14113	SH3BP2	1
Done

Running MutSig 2:
Scatter job 156: processing genes 14023 - 14113
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SGK223
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.800406e-02	ci left: 2.408450e-01	ci right 2.579012e-01	k: 2493	n:10000
Cons ci ratio: 9.354076e-03	ci left: 9.415963e-01	ci right 9.505416e-01	k: 9462	n:10000
KS ci ratio: 1.268230e-01	ci left: 8.164409e-02	ci right 9.279774e-02	k: 871	n:10000
SGK223   10000 perm   2 sec   (4916 perm/sec)   p_kst 8.710000e-02   p_cons 9.462000e-01   p_joint 2.493000e-01

Joint ci ratio: 4.992055e-02	ci left: 2.297324e-01	ci right 2.415446e-01	k: 4712	n:20000
Cons ci ratio: 6.569650e-03	ci left: 9.436504e-01	ci right 9.499189e-01	k: 18937	n:20000
KS ci ratio: 9.237437e-02	ci left: 7.877186e-02	ci right 8.645000e-02	k: 1651	n:20000
SGK223   20000 perm   7 sec   (2827 perm/sec)   p_kst 8.255000e-02   p_cons 9.468500e-01   p_joint 2.356000e-01

Outputting figure to mutsig2_images.part000000000156/SGK223.4_4229_20000_0.08255_0.94685_0.2356.png
                gene_name: SGK223
               theta_stop: 0.092 
                    nperm: 20000 
                     p_ks: 0.083 
        ci_ks_bounds_left: 0.079 
       ci_ks_bounds_right: 0.086 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 0.24 
     ci_joint_bounds_left: 0.23 
    ci_joint_bounds_right: 0.24 

Current progress: 25 percent done.
SFRS11
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.930025e-02	ci left: 7.969948e-01	ci right 8.126273e-01	k: 8049	n:10000
KS ci ratio: 1.684207e-02	ci left: 8.369418e-01	ci right 8.512571e-01	k: 8442	n:10000
SFRS11   10000 perm   2 sec   (6358 perm/sec)   p_kst 8.442000e-01   p_cons 8.049000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000156/SFRS11.2_1503_10000_0.8442_0.8049_1.png
                gene_name: SFRS11
               theta_stop: 0.019 
                    nperm: 10000 
                     p_ks: 0.84 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.85 
                   p_cons: 0.80 
      ci_cons_bounds_left: 0.80 
     ci_cons_bounds_right: 0.81 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
SFRS15
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.784775e-03	ci left: 9.675208e-01	ci right 9.742012e-01	k: 9710	n:10000
Cons ci ratio: 2.003453e-02	ci left: 7.848229e-01	ci right 8.008061e-01	k: 7929	n:10000
KS ci ratio: 9.679838e-03	ci left: 9.378606e-01	ci right 9.470795e-01	k: 9426	n:10000
SFRS15   10000 perm   2 sec   (5435 perm/sec)   p_kst 9.426000e-01   p_cons 7.929000e-01   p_joint 9.710000e-01

Outputting figure to mutsig2_images.part000000000156/SFRS15.2_3524_10000_0.9426_0.7929_0.971.png
                gene_name: SFRS15
               theta_stop: 0.020 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.94 
       ci_ks_bounds_right: 0.95 
                   p_cons: 0.79 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.80 
                  p_joint: 0.97 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.97 

Current progress: 75 percent done.
SH2D6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.639408e-02	ci left: 5.271675e-01	ci right 5.468110e-01	k: 5370	n:10000
Cons ci ratio: 3.885079e-02	ci left: 4.945505e-01	ci right 5.142470e-01	k: 5044	n:10000
KS ci ratio: 7.254263e-02	ci left: 2.177347e-01	ci right 2.342252e-01	k: 2259	n:10000
SH2D6   10000 perm   1 sec   (6817 perm/sec)   p_kst 2.259000e-01   p_cons 5.044000e-01   p_joint 5.370000e-01

Outputting figure to mutsig2_images.part000000000156/SH2D6.2_544_10000_0.2259_0.5044_0.537.png
                gene_name: SH2D6
               theta_stop: 0.073 
                    nperm: 10000 
                     p_ks: 0.23 
        ci_ks_bounds_left: 0.22 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.50 
      ci_cons_bounds_left: 0.49 
     ci_cons_bounds_right: 0.51 
                  p_joint: 0.54 
     ci_joint_bounds_left: 0.53 
    ci_joint_bounds_right: 0.55 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000156
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 156 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1725>
Subject: Job 8704346: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1725>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000157> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 19:38:52 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000157.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000157.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 157  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000157.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    148.44 sec.
    Max Memory :      6068 MB
    Max Swap   :      8505 MB

    Max Processes  :         7
    Max Threads    :        71

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
157
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 157
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 157: processing genes 14114 - 14203
Calculating significance of each gene.
Using projection method.
14114	SH3BP4	1
14115	SH3BP5	1
14116	SH3BP5L	1
14117	SH3D19	1
14118	SH3GL1	1
14119	SH3GL2	1
14120	SH3GL3	1
14121	SH3GLB1	1
14122	SH3GLB2	1.018494e-01
14123	SH3KBP1	7.000406e-02
14124	SH3PXD2A	3.574549e-01
14125	SH3PXD2B	1
14126	SH3RF1	1
14127	SH3RF2	1
14128	SH3RF3	1
14129	SH3TC1	1
14130	SH3TC2	1
14131	SH3YL1	1
14132	SHANK1	1.194523e-01
14133	SHANK2	1
14134	SHANK3	1
14135	SHARPIN	1
14136	SHB	1.229052e-02
14137	SHBG	1
14138	SHC1	1.484885e-01
14139	SHC2	1
14140	SHC3	1
14141	SHC4	1
14142	SHCBP1	1
14143	SHD	1
14144	SHE	1
14145	SHF	1
In gene SHFM1 the following bins exceed PROBCAP:
    THCA-DJ-A2PX-TP	categ 5	N = 225     n = 1	mu =   1.02e-07
14146	SHFM1	1.091799e-02
14147	SHH	1
14148	SHISA2	1
14149	SHISA3	1
14150	SHISA4	1
14151	SHISA5	1
14152	SHKBP1	1
14153	SHMT1	1
14154	SHMT2	1
14155	SHOC2	1
14156	SHOX	1
14157	SHOX2	1
14158	SHPK	1
14159	SHPRH	1
14160	SHQ1	2.041698e-01
14161	SHROOM1	1.485440e-01
14162	SHROOM2	3.889941e-02
14163	SHROOM3	1.684672e-01
14164	SHROOM4	1
14165	SI	1
14166	SIAE	1
14167	SIAH1	1
14168	SIAH2	1
14169	SIAH3	1
14170	SIDT1	2.451186e-01
14171	SIDT2	2.666532e-01
14172	SIGIRR	1
14173	SIGLEC1	1
14174	SIGLEC10	1
14175	SIGLEC11	1
14176	SIGLEC12	2.118116e-01
14177	SIGLEC14	1
14178	SIGLEC15	1
14179	SIGLEC5	1
14180	SIGLEC6	1.300014e-02
14181	SIGLEC7	1
14182	SIGLEC8	1
14183	SIGLEC9	1
14184	SIGMAR1	1.278886e-02
14185	SIK1	1
14186	SIK2	1
14187	SIK3	1
14188	SIKE1	9.469836e-02
14189	SIL1	1
14190	SILV	1
14191	SIM1	2.557635e-01
14192	SIM2	1
14193	SIN3A	1
14194	SIN3B	2.945343e-01
14195	SIP1	1
14196	SIPA1	1
14197	SIPA1L1	3.005323e-01
14198	SIPA1L2	4.213517e-01
14199	SIPA1L3	1
14200	SIRPA	1.442698e-01
14201	SIRPB1	1
14202	SIRPB2	1
14203	SIRPD	1
Done

Running MutSig 2:
Scatter job 157: processing genes 14114 - 14203
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SHROOM3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.650805e-02	ci left: 8.422384e-01	ci right 8.563575e-01	k: 8494	n:10000
Cons ci ratio: 4.580278e-02	ci left: 4.129917e-01	ci right 4.324533e-01	k: 4227	n:10000
KS ci ratio: 8.867088e-03	ci left: 9.470021e-01	ci right 9.555325e-01	k: 9514	n:10000
SHROOM3   10000 perm   2 sec   (4498 perm/sec)   p_kst 9.514000e-01   p_cons 4.227000e-01   p_joint 8.494000e-01

Outputting figure to mutsig2_images.part000000000157/SHROOM3.3_6035_10000_0.9514_0.4227_0.8494.png
                gene_name: SHROOM3
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.96 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.85 
     ci_joint_bounds_left: 0.84 
    ci_joint_bounds_right: 0.86 

Current progress: 20 percent done.
SHANK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.924448e-02	ci left: 6.329156e-01	ci right 6.518014e-01	k: 6424	n:10000
Cons ci ratio: 3.709500e-02	ci left: 5.176582e-01	ci right 5.373258e-01	k: 5275	n:10000
KS ci ratio: 6.019367e-02	ci left: 2.887481e-01	ci right 3.067699e-01	k: 2977	n:10000
SHANK1   10000 perm   2 sec   (4516 perm/sec)   p_kst 2.977000e-01   p_cons 5.275000e-01   p_joint 6.424000e-01

Outputting figure to mutsig2_images.part000000000157/SHANK1.2_6578_10000_0.2977_0.5275_0.6424.png
                gene_name: SHANK1
               theta_stop: 0.060 
                    nperm: 10000 
                     p_ks: 0.30 
        ci_ks_bounds_left: 0.29 
       ci_ks_bounds_right: 0.31 
                   p_cons: 0.53 
      ci_cons_bounds_left: 0.52 
     ci_cons_bounds_right: 0.54 
                  p_joint: 0.64 
     ci_joint_bounds_left: 0.63 
    ci_joint_bounds_right: 0.65 

Current progress: 40 percent done.
SHROOM2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.878641e-03	ci left: 9.882892e-01	ci right 9.922172e-01	k: 9904	n:10000
Cons ci ratio: 4.065557e-02	ci left: 4.718633e-01	ci right 4.915474e-01	k: 4817	n:10000
KS ci ratio: 9.009714e-03	ci left: 9.454415e-01	ci right 9.540941e-01	k: 9499	n:10000
SHROOM2   10000 perm   2 sec   (5174 perm/sec)   p_kst 9.499000e-01   p_cons 4.817000e-01   p_joint 9.904000e-01

Outputting figure to mutsig2_images.part000000000157/SHROOM2.2_4891_10000_0.9499_0.4817_0.9904.png
                gene_name: SHROOM2
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.95 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.49 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 60 percent done.
SIGLEC6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.438733e-01	ci left: 6.410846e-02	ci right 7.414431e-02	k: 690	n:10000
Cons ci ratio: 1.265054e-01	ci left: 8.203252e-02	ci right 9.320908e-02	k: 875	n:10000
KS ci ratio: 4.022656e-02	ci left: 4.771585e-01	ci right 4.968491e-01	k: 4870	n:10000
SIGLEC6   10000 perm   2 sec   (6268 perm/sec)   p_kst 4.870000e-01   p_cons 8.750000e-02   p_joint 6.900000e-02

Joint ci ratio: 8.726152e-02	ci left: 8.763679e-02	ci right 9.568239e-02	k: 1832	n:20000
Cons ci ratio: 9.001893e-02	ci left: 8.268849e-02	ci right 9.053218e-02	k: 1731	n:20000
KS ci ratio: 2.876161e-02	ci left: 4.745533e-01	ci right 4.884520e-01	k: 9630	n:20000
SIGLEC6   20000 perm   4 sec   (5453 perm/sec)   p_kst 4.815000e-01   p_cons 8.655000e-02   p_joint 9.160000e-02

Outputting figure to mutsig2_images.part000000000157/SIGLEC6.2_1427_20000_0.4815_0.08655_0.0916.png
                gene_name: SIGLEC6
               theta_stop: 0.090 
                    nperm: 20000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.47 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.087 
      ci_cons_bounds_left: 0.083 
     ci_cons_bounds_right: 0.091 
                  p_joint: 0.092 
     ci_joint_bounds_left: 0.088 
    ci_joint_bounds_right: 0.096 

Current progress: 80 percent done.
SIRPA
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.335644e-01	ci left: 7.398022e-02	ci right 8.466637e-02	k: 792	n:10000
Cons ci ratio: 3.509652e-02	ci left: 5.451948e-01	ci right 5.647731e-01	k: 5550	n:10000
KS ci ratio: 3.618281e-01	ci left: 9.503508e-03	ci right 1.378807e-02	k: 115	n:10000
SIRPA   10000 perm   2 sec   (6204 perm/sec)   p_kst 1.150000e-02   p_cons 5.550000e-01   p_joint 7.920000e-02

Joint ci ratio: 6.051847e-02	ci left: 1.681264e-01	ci right 1.786687e-01	k: 3467	n:20000
Cons ci ratio: 2.480602e-02	ci left: 5.483303e-01	ci right 5.621536e-01	k: 11105	n:20000
KS ci ratio: 2.640385e-01	ci left: 9.460703e-03	ci right 1.238410e-02	k: 217	n:20000
SIRPA   20000 perm   3 sec   (5727 perm/sec)   p_kst 1.085000e-02   p_cons 5.552500e-01   p_joint 1.733500e-01

Joint ci ratio: 7.317732e-02	ci left: 8.409645e-02	ci right 9.051707e-02	k: 2618	n:30000
Cons ci ratio: 2.026335e-02	ci left: 5.493880e-01	ci right 5.606680e-01	k: 16651	n:30000
KS ci ratio: 2.110666e-01	ci left: 1.016635e-02	ci right 1.259633e-02	k: 340	n:30000
SIRPA   30000 perm   5 sec   (5607 perm/sec)   p_kst 1.133333e-02   p_cons 5.550333e-01   p_joint 8.726667e-02

Joint ci ratio: 5.852346e-02	ci left: 9.789086e-02	ci right 1.038172e-01	k: 4033	n:40000
Cons ci ratio: 1.760419e-02	ci left: 5.485870e-01	ci right 5.583553e-01	k: 22139	n:40000
KS ci ratio: 1.877974e-01	ci left: 9.762548e-03	ci right 1.180941e-02	k: 430	n:40000
SIRPA   40000 perm   7 sec   (5479 perm/sec)   p_kst 1.075000e-02   p_cons 5.534750e-01   p_joint 1.008250e-01

Joint ci ratio: 6.905819e-02	ci left: 5.844551e-02	ci right 6.264569e-02	k: 3026	n:50000
Cons ci ratio: 1.572650e-02	ci left: 5.497101e-01	ci right 5.584437e-01	k: 27704	n:50000
KS ci ratio: 1.703446e-01	ci left: 9.586755e-03	ci right 1.139076e-02	k: 523	n:50000
SIRPA   50000 perm   9 sec   (5356 perm/sec)   p_kst 1.046000e-02   p_cons 5.540800e-01   p_joint 6.052000e-02

Joint ci ratio: 6.450375e-02	ci left: 5.610995e-02	ci right 5.986628e-02	k: 3478	n:60000
Cons ci ratio: 1.439743e-02	ci left: 5.486774e-01	ci right 5.566509e-01	k: 33160	n:60000
KS ci ratio: 1.540002e-01	ci left: 9.860094e-03	ci right 1.152108e-02	k: 640	n:60000
SIRPA   60000 perm   11 sec   (5250 perm/sec)   p_kst 1.066667e-02   p_cons 5.526667e-01   p_joint 5.796667e-02

Joint ci ratio: 6.015942e-02	ci left: 5.546276e-02	ci right 5.891692e-02	k: 4002	n:70000
Cons ci ratio: 1.331280e-02	ci left: 5.495935e-01	ci right 5.569735e-01	k: 38730	n:70000
KS ci ratio: 1.431420e-01	ci left: 9.840773e-03	ci right 1.137163e-02	k: 741	n:70000
SIRPA   70000 perm   14 sec   (5157 perm/sec)   p_kst 1.058571e-02   p_cons 5.532857e-01   p_joint 5.717143e-02

Joint ci ratio: 5.591746e-02	ci left: 5.625438e-02	ci right 5.950278e-02	k: 4629	n:80000
Cons ci ratio: 1.244730e-02	ci left: 5.500595e-01	ci right 5.569616e-01	k: 44281	n:80000
KS ci ratio: 1.337379e-01	ci left: 9.913980e-03	ci right 1.134684e-02	k: 849	n:80000
SIRPA   80000 perm   16 sec   (5063 perm/sec)   p_kst 1.061250e-02   p_cons 5.535125e-01   p_joint 5.786250e-02

Joint ci ratio: 5.290710e-02	ci left: 5.596588e-02	ci right 5.901828e-02	k: 5173	n:90000
Cons ci ratio: 1.170728e-02	ci left: 5.514457e-01	ci right 5.579507e-01	k: 49923	n:90000
KS ci ratio: 1.257740e-01	ci left: 1.000578e-02	ci right 1.135937e-02	k: 960	n:90000
SIRPA   90000 perm   18 sec   (4965 perm/sec)   p_kst 1.066667e-02   p_cons 5.547000e-01   p_joint 5.747778e-02

Joint ci ratio: 5.000269e-02	ci left: 5.645040e-02	ci right 5.935531e-02	k: 5789	n:100000
Cons ci ratio: 1.110494e-02	ci left: 5.516831e-01	ci right 5.578537e-01	k: 55477	n:100000
KS ci ratio: 1.190259e-01	ci left: 1.009095e-02	ci right 1.137766e-02	k: 1072	n:100000
SIRPA   100000 perm   21 sec   (4878 perm/sec)   p_kst 1.072000e-02   p_cons 5.547700e-01   p_joint 5.789000e-02

Joint ci ratio: 4.658680e-02	ci left: 5.906220e-02	ci right 6.188830e-02	k: 6651	n:110000
Cons ci ratio: 1.059453e-02	ci left: 5.515296e-01	ci right 5.574130e-01	k: 60992	n:110000
KS ci ratio: 1.143368e-01	ci left: 9.967861e-03	ci right 1.118542e-02	k: 1162	n:110000
SIRPA   110000 perm   23 sec   (4788 perm/sec)   p_kst 1.056364e-02   p_cons 5.544727e-01   p_joint 6.046364e-02

Joint ci ratio: 4.392995e-02	ci left: 6.085643e-02	ci right 6.359811e-02	k: 7466	n:120000
Cons ci ratio: 1.014037e-02	ci left: 5.518075e-01	ci right 5.574398e-01	k: 66555	n:120000
KS ci ratio: 1.089810e-01	ci left: 1.008502e-02	ci right 1.125548e-02	k: 1279	n:120000
SIRPA   120000 perm   25 sec   (4707 perm/sec)   p_kst 1.065833e-02   p_cons 5.546250e-01   p_joint 6.221667e-02

Joint ci ratio: 1.935767e-02	ci left: 2.374734e-01	ci right 2.421229e-01	k: 31173	n:130000
Cons ci ratio: 9.742603e-03	ci left: 5.519163e-01	ci right 5.573274e-01	k: 72101	n:130000
KS ci ratio: 1.044647e-01	ci left: 1.015530e-02	ci right 1.128207e-02	k: 1392	n:130000
SIRPA   130000 perm   28 sec   (4626 perm/sec)   p_kst 1.070769e-02   p_cons 5.546231e-01   p_joint 2.397923e-01

Joint ci ratio: 1.864950e-02	ci left: 2.376365e-01	ci right 2.421171e-01	k: 33582	n:140000
Cons ci ratio: 9.386209e-03	ci left: 5.521205e-01	ci right 5.573344e-01	k: 77662	n:140000
KS ci ratio: 1.010794e-01	ci left: 1.009103e-02	ci right 1.117224e-02	k: 1487	n:140000
SIRPA   140000 perm   31 sec   (4549 perm/sec)   p_kst 1.062143e-02   p_cons 5.547286e-01   p_joint 2.398714e-01

Joint ci ratio: 1.802365e-02	ci left: 2.375812e-01	ci right 2.419088e-01	k: 35961	n:150000
Cons ci ratio: 9.069816e-03	ci left: 5.521071e-01	ci right 5.571441e-01	k: 83194	n:150000
KS ci ratio: 9.800323e-02	ci left: 1.003585e-02	ci right 1.107653e-02	k: 1582	n:150000
SIRPA   150000 perm   34 sec   (4469 perm/sec)   p_kst 1.054667e-02   p_cons 5.546267e-01   p_joint 2.397400e-01

Outputting figure to mutsig2_images.part000000000157/SIRPA.2_1547_150000_0.010547_0.55463_0.23974.png
                gene_name: SIRPA
               theta_stop: 0.098 
                    nperm: 150000 
                     p_ks: 0.011 
        ci_ks_bounds_left: 0.010 
       ci_ks_bounds_right: 0.011 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.55 
     ci_cons_bounds_right: 0.56 
                  p_joint: 0.24 
     ci_joint_bounds_left: 0.24 
    ci_joint_bounds_right: 0.24 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000157
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 157 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1726>
Subject: Job 8704347: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1726>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000158> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 19:38:07 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000158.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000158.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 158  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000158.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :     97.16 sec.
    Max Memory :      5637 MB
    Max Swap   :      8411 MB

    Max Processes  :         7
    Max Threads    :        67

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
158
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 158
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 158: processing genes 14204 - 14293
Calculating significance of each gene.
Using projection method.
14204	SIRPG	1
14205	SIRT1	1
14206	SIRT2	5.725418e-02
14207	SIRT3	1
14208	SIRT4	8.975459e-02
14209	SIRT5	1
14210	SIRT6	1
14211	SIRT7	1
14212	SIT1	1
14213	SIVA1	1
14214	SIX1	1
14215	SIX2	1
14216	SIX3	1
14217	SIX4	1
14218	SIX5	1.570771e-01
14219	SIX6	1
14220	SKA1	1
14221	SKA2	1.891224e-02
14222	SKA3	1
14223	SKAP1	1
14224	SKAP2	1.343562e-02
14225	SKI	1
14226	SKIL	1
14227	SKIV2L	1
14228	SKIV2L2	1
14229	SKP1	1
14230	SKP2	1
14231	SLA	3.218738e-05
14232	SLA2	1
14233	SLAIN1	1
14234	SLAIN2	1
14235	SLAMF1	2.288944e-02
14236	SLAMF6	1
14237	SLAMF7	1
14238	SLAMF8	1.261486e-01
14239	SLAMF9	1
14240	SLBP	1
14241	SLC10A1	1
14242	SLC10A2	1
14243	SLC10A3	1
14244	SLC10A4	1
14245	SLC10A5	1
14246	SLC10A6	1
14247	SLC10A7	1
In gene SLC11A1 the following bins exceed PROBCAP:
    THCA-EM-A2P1-TP	categ 6	N = 1689    n = 1	mu =   3.33e-08
14248	SLC11A1	4.261421e-02
14249	SLC11A2	1
14250	SLC12A1	1
14251	SLC12A2	1
14252	SLC12A3	1
14253	SLC12A4	2.208242e-02
14254	SLC12A5	4.413957e-01
14255	SLC12A6	1
14256	SLC12A7	3.494852e-01
14257	SLC12A8	1
14258	SLC12A9	1
14259	SLC13A1	1
14260	SLC13A2	1
14261	SLC13A3	1
14262	SLC13A4	1
14263	SLC13A5	1
14264	SLC14A1	1
14265	SLC14A2	1
14266	SLC15A1	1
14267	SLC15A2	1
14268	SLC15A3	1
14269	SLC15A4	1
14270	SLC16A1	1
14271	SLC16A10	1
14272	SLC16A11	1
14273	SLC16A12	1
14274	SLC16A13	1
14275	SLC16A14	1
14276	SLC16A2	1
14277	SLC16A3	1
14278	SLC16A4	1
14279	SLC16A5	1
14280	SLC16A6	1
14281	SLC16A7	1
14282	SLC16A8	1
14283	SLC16A9	1
14284	SLC17A1	1
14285	SLC17A2	1
14286	SLC17A3	1
14287	SLC17A4	1
14288	SLC17A5	1
14289	SLC17A6	1
14290	SLC17A7	1
14291	SLC17A8	1
14292	SLC17A9	1
14293	SLC18A1	1
Done

Running MutSig 2:
Scatter job 158: processing genes 14204 - 14293
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SLA
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.352295e-02	ci left: 8.874939e-01	ci right 8.996757e-01	k: 8937	n:10000
Cons ci ratio: 4.262781e-02	ci left: 4.482980e-01	ci right 4.679264e-01	k: 4581	n:10000
KS ci ratio: 1.495415e-02	ci left: 8.663151e-01	ci right 8.794668e-01	k: 8730	n:10000
SLA   10000 perm   1 sec   (6676 perm/sec)   p_kst 8.730000e-01   p_cons 4.581000e-01   p_joint 8.937000e-01

Outputting figure to mutsig2_images.part000000000158/SLA.3_994_10000_0.873_0.4581_0.8937.png
                gene_name: SLA
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.87 
       ci_ks_bounds_right: 0.88 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 0.89 
     ci_joint_bounds_left: 0.89 
    ci_joint_bounds_right: 0.90 

Current progress: 50 percent done.
SLC12A4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.166900e-01	ci left: 9.545302e-02	ci right 1.073803e-01	k: 1013	n:10000
Cons ci ratio: 1.021741e-01	ci left: 1.217066e-01	ci right 1.349108e-01	k: 1282	n:10000
KS ci ratio: 9.875836e-02	ci left: 1.293382e-01	ci right 1.428746e-01	k: 1360	n:10000
SLC12A4   10000 perm   2 sec   (6151 perm/sec)   p_kst 1.360000e-01   p_cons 1.282000e-01   p_joint 1.013000e-01

Joint ci ratio: 7.794982e-02	ci left: 1.078575e-01	ci right 1.166556e-01	k: 2244	n:20000
Cons ci ratio: 7.107820e-02	ci left: 1.272883e-01	ci right 1.367189e-01	k: 2639	n:20000
KS ci ratio: 6.857068e-02	ci left: 1.356129e-01	ci right 1.452919e-01	k: 2808	n:20000
SLC12A4   20000 perm   4 sec   (5555 perm/sec)   p_kst 1.404000e-01   p_cons 1.319500e-01   p_joint 1.122000e-01

Outputting figure to mutsig2_images.part000000000158/SLC12A4.3_3582_20000_0.1404_0.13195_0.1122.png
                gene_name: SLC12A4
               theta_stop: 0.078 
                    nperm: 20000 
                     p_ks: 0.14 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.15 
                   p_cons: 0.13 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.14 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.11 
    ci_joint_bounds_right: 0.12 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000158
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 158 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1729>
Subject: Job 8704348: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1729>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000159> was used as the working directory.
Started at Thu Nov 15 19:36:23 2012
Results reported at Thu Nov 15 22:28:50 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000159.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000159.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 159  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000159.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10238.03 sec.
    Max Memory :      5987 MB
    Max Swap   :      8537 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
159
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 159
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 159: processing genes 14294 - 14384
Calculating significance of each gene.
Using projection method.
14294	SLC18A2	1
14295	SLC18A3	1
14296	SLC19A1	1
14297	SLC19A2	1
14298	SLC19A3	1
14299	SLC1A1	1
14300	SLC1A2	1
14301	SLC1A3	1
14302	SLC1A4	1
14303	SLC1A5	1
14304	SLC1A6	3.699204e-03
14305	SLC1A7	1
14306	SLC20A1	1
14307	SLC20A2	1
14308	SLC22A1	1
14309	SLC22A10	1
14310	SLC22A11	1
14311	SLC22A12	1
14312	SLC22A13	1
14313	SLC22A14	1
14314	SLC22A15	1
14315	SLC22A16	2.174721e-01
14316	SLC22A17	1
14317	SLC22A18	1
In gene SLC22A2 the following bins exceed PROBCAP:
    THCA-FE-A235-TP	categ 6	N = 1710    n = 1	mu =   1.02e-07
14318	SLC22A2	9.369484e-02
14319	SLC22A20	1
14320	SLC22A23	1
14321	SLC22A25	1
14322	SLC22A3	6.957041e-02
14323	SLC22A4	1
14324	SLC22A5	1
14325	SLC22A6	2.123755e-01
14326	SLC22A7	1
14327	SLC22A8	1
14328	SLC22A9	1
14329	SLC23A1	1
14330	SLC23A2	9.004389e-02
14331	SLC23A3	1
14332	SLC24A1	1
14333	SLC24A2	1
14334	SLC24A3	2.513239e-01
14335	SLC24A4	1
14336	SLC24A5	1
14337	SLC24A6	6.699045e-02
14338	SLC25A1	1
14339	SLC25A10	1
14340	SLC25A11	1
14341	SLC25A12	1.085840e-01
14342	SLC25A13	1.711410e-01
14343	SLC25A14	1
14344	SLC25A15	1
14345	SLC25A16	1
14346	SLC25A17	1
14347	SLC25A18	1
14348	SLC25A19	1
14349	SLC25A2	1
14350	SLC25A20	1
14351	SLC25A21	1
14352	SLC25A22	1
14353	SLC25A23	1
14354	SLC25A24	1
14355	SLC25A25	1
14356	SLC25A26	1
14357	SLC25A27	1
14358	SLC25A28	1
14359	SLC25A29	1
14360	SLC25A3	1
14361	SLC25A30	1
14362	SLC25A31	1
14363	SLC25A32	1
14364	SLC25A33	7.438082e-02
14365	SLC25A34	1
14366	SLC25A35	1
14367	SLC25A36	1
14368	SLC25A37	1
14369	SLC25A38	1
14370	SLC25A39	1
14371	SLC25A4	1
14372	SLC25A40	1
14373	SLC25A41	1
14374	SLC25A42	1
14375	SLC25A43	4.333116e-02
14376	SLC25A44	1
14377	SLC25A45	8.440546e-05
14378	SLC25A46	1
14379	SLC25A5	1
14380	SLC25A6	1
14381	SLC26A1	1
14382	SLC26A10	1
14383	SLC26A11	4.326551e-03
14384	SLC26A2	1
Done

Running MutSig 2:
Scatter job 159: processing genes 14294 - 14384
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SLC1A6
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.076116e-03	ci left: 9.809150e-01	ci right 9.859977e-01	k: 9836	n:10000
Cons ci ratio: 2.357332e-02	ci left: 7.256263e-01	ci right 7.430370e-01	k: 7344	n:10000
KS ci ratio: 3.280928e-02	ci left: 5.782787e-01	ci right 5.976700e-01	k: 5880	n:10000
SLC1A6   10000 perm   2 sec   (5905 perm/sec)   p_kst 5.880000e-01   p_cons 7.344000e-01   p_joint 9.836000e-01

Outputting figure to mutsig2_images.part000000000159/SLC1A6.3_1731_10000_0.588_0.7344_0.9836.png
                gene_name: SLC1A6
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.74 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 33 percent done.
SLC25A45
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.838735e-02	ci left: 5.005505e-01	ci right 5.202435e-01	k: 5104	n:10000
Cons ci ratio: 6.265710e-02	ci left: 2.724030e-01	ci right 2.901245e-01	k: 2812	n:10000
KS ci ratio: 3.998584e-02	ci left: 4.801563e-01	ci right 4.998496e-01	k: 4900	n:10000
SLC25A45   10000 perm   1 sec   (6867 perm/sec)   p_kst 4.900000e-01   p_cons 2.812000e-01   p_joint 5.104000e-01

Outputting figure to mutsig2_images.part000000000159/SLC25A45.3_891_10000_0.49_0.2812_0.5104.png
                gene_name: SLC25A45
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.49 
        ci_ks_bounds_left: 0.48 
       ci_ks_bounds_right: 0.50 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 67 percent done.
SLC26A11
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 2.017470e-02	ci left: 7.824912e-01	ci right 7.985392e-01	k: 7906	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
SLC26A11   10000 perm   2 sec   (6655 perm/sec)   p_kst 1.000000e-04   p_cons 7.906000e-01   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 1.425902e-02	ci left: 7.850454e-01	ci right 7.963699e-01	k: 15815	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
SLC26A11   20000 perm   3 sec   (5910 perm/sec)   p_kst 5.000000e-05   p_cons 7.907500e-01   p_joint 0

Joint ci ratio: 4.614141e-01	ci left: 1.848835e-03	ci right 2.984304e-03	k: 71	n:30000
Cons ci ratio: 1.166877e-02	ci left: 7.853463e-01	ci right 7.945975e-01	k: 23700	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
SLC26A11   30000 perm   5 sec   (5570 perm/sec)   p_kst 3.333333e-05   p_cons 7.900000e-01   p_joint 2.366667e-03

Joint ci ratio: 6.118797e-01	ci left: 7.145078e-04	ci right 1.361470e-03	k: 40	n:40000
Cons ci ratio: 1.009173e-02	ci left: 7.864281e-01	ci right 7.944297e-01	k: 31618	n:40000
KS ci ratio: 2.263100e+00	ci left: 6.055289e-06	ci right 1.806054e-04	k: 2	n:40000
SLC26A11   40000 perm   7 sec   (5370 perm/sec)   p_kst 5.000000e-05   p_cons 7.904500e-01   p_joint 1.000000e-03

Joint ci ratio: 7.685677e-01	ci left: 3.235989e-04	ci right 7.380108e-04	k: 25	n:50000
Cons ci ratio: 9.010226e-03	ci left: 7.874495e-01	ci right 7.945967e-01	k: 39552	n:50000
KS ci ratio: 2.263123e+00	ci left: 4.844222e-06	ci right 1.444862e-04	k: 2	n:50000
SLC26A11   50000 perm   10 sec   (5226 perm/sec)   p_kst 4.000000e-05   p_cons 7.910400e-01   p_joint 5.000000e-04

Joint ci ratio: 4.435603e-01	ci left: 1.012915e-03	ci right 1.603689e-03	k: 77	n:60000
Cons ci ratio: 8.200448e-03	ci left: 7.887635e-01	ci right 7.952749e-01	k: 47522	n:60000
KS ci ratio: 1.239499e+00	ci left: 6.859177e-05	ci right 2.847275e-04	k: 9	n:60000
SLC26A11   60000 perm   12 sec   (5103 perm/sec)   p_kst 1.500000e-04   p_cons 7.920333e-01   p_joint 1.283333e-03

Joint ci ratio: 5.487059e-01	ci left: 5.302017e-04	ci right 9.415896e-04	k: 50	n:70000
Cons ci ratio: 7.591256e-03	ci left: 7.890459e-01	ci right 7.950728e-01	k: 55445	n:70000
KS ci ratio: 1.181823e+00	ci left: 6.850761e-05	ci right 2.627036e-04	k: 10	n:70000
SLC26A11   70000 perm   14 sec   (4996 perm/sec)   p_kst 1.428571e-04   p_cons 7.920714e-01   p_joint 7.142857e-04

Joint ci ratio: 2.682345e-01	ci left: 2.305647e-03	ci right 3.031168e-03	k: 212	n:80000
Cons ci ratio: 7.092805e-03	ci left: 7.896229e-01	ci right 7.952559e-01	k: 63396	n:80000
KS ci ratio: 1.047566e+00	ci left: 8.652715e-05	ci right 2.778639e-04	k: 13	n:80000
SLC26A11   80000 perm   16 sec   (4896 perm/sec)   p_kst 1.625000e-04   p_cons 7.924500e-01   p_joint 2.650000e-03

Joint ci ratio: 2.604255e-01	ci left: 2.184320e-03	ci right 2.848393e-03	k: 225	n:90000
Cons ci ratio: 6.679365e-03	ci left: 7.901706e-01	ci right 7.954772e-01	k: 71355	n:90000
KS ci ratio: 1.012050e+00	ci left: 8.504620e-05	ci right 2.609820e-04	k: 14	n:90000
SLC26A11   90000 perm   19 sec   (4791 perm/sec)   p_kst 1.555556e-04   p_cons 7.928333e-01   p_joint 2.500000e-03

Joint ci ratio: 2.833688e-01	ci left: 1.639636e-03	ci right 2.189898e-03	k: 190	n:100000
Cons ci ratio: 6.327790e-03	ci left: 7.907667e-01	ci right 7.957963e-01	k: 79329	n:100000
KS ci ratio: 8.992197e-01	ci left: 1.066828e-04	ci right 2.844627e-04	k: 18	n:100000
SLC26A11   100000 perm   21 sec   (4700 perm/sec)   p_kst 1.800000e-04   p_cons 7.932900e-01   p_joint 1.900000e-03

Joint ci ratio: 2.762415e-01	ci left: 1.575102e-03	ci right 2.088099e-03	k: 200	n:110000
Cons ci ratio: 6.026268e-03	ci left: 7.912691e-01	ci right 7.960609e-01	k: 87304	n:110000
KS ci ratio: 8.356594e-01	ci left: 1.181795e-04	ci right 2.918101e-04	k: 21	n:110000
SLC26A11   110000 perm   24 sec   (4601 perm/sec)   p_kst 1.909091e-04   p_cons 7.936727e-01   p_joint 1.818182e-03

Joint ci ratio: 2.689877e-01	ci left: 1.529240e-03	ci right 2.012016e-03	k: 211	n:120000
Cons ci ratio: 5.770846e-03	ci left: 7.913072e-01	ci right 7.958952e-01	k: 95233	n:120000
KS ci ratio: 7.839151e-01	ci left: 1.281478e-04	ci right 2.975696e-04	k: 24	n:120000
SLC26A11   120000 perm   27 sec   (4514 perm/sec)   p_kst 2.000000e-04   p_cons 7.936083e-01   p_joint 1.758333e-03

Joint ci ratio: 2.696438e-01	ci left: 1.404421e-03	ci right 1.849054e-03	k: 210	n:130000
Cons ci ratio: 5.546152e-03	ci left: 7.912969e-01	ci right 7.957054e-01	k: 103156	n:130000
KS ci ratio: 7.686954e-01	ci left: 1.244551e-04	ci right 2.838711e-04	k: 25	n:130000
SLC26A11   130000 perm   29 sec   (4434 perm/sec)   p_kst 1.923077e-04   p_cons 7.935077e-01   p_joint 1.615385e-03

Joint ci ratio: 2.864663e-01	ci left: 1.144594e-03	ci right 1.533673e-03	k: 186	n:140000
Cons ci ratio: 5.355827e-03	ci left: 7.906745e-01	ci right 7.949277e-01	k: 110993	n:140000
KS ci ratio: 7.687011e-01	ci left: 1.155652e-04	ci right 2.635954e-04	k: 25	n:140000
SLC26A11   140000 perm   32 sec   (4357 perm/sec)   p_kst 1.785714e-04   p_cons 7.928071e-01   p_joint 1.328571e-03

Joint ci ratio: 2.770001e-01	ci left: 1.148834e-03	ci right 1.524201e-03	k: 199	n:150000
Cons ci ratio: 5.176537e-03	ci left: 7.905994e-01	ci right 7.947092e-01	k: 118899	n:150000
KS ci ratio: 7.687061e-01	ci left: 1.078607e-04	ci right 2.460231e-04	k: 25	n:150000
SLC26A11   150000 perm   35 sec   (4287 perm/sec)   p_kst 1.666667e-04   p_cons 7.926600e-01   p_joint 1.326667e-03

Joint ci ratio: 2.880366e-01	ci left: 9.899087e-04	ci right 1.328585e-03	k: 184	n:160000
Cons ci ratio: 4.870134e-03	ci left: 7.999887e-01	ci right 8.039004e-01	k: 128312	n:160000
KS ci ratio: 7.543383e-01	ci left: 1.061531e-04	ci right 2.380912e-04	k: 26	n:160000
SLC26A11   160000 perm   38 sec   (4216 perm/sec)   p_kst 1.625000e-04   p_cons 8.019500e-01   p_joint 1.150000e-03

Joint ci ratio: 2.812781e-01	ci left: 9.808404e-04	ci right 1.307144e-03	k: 193	n:170000
Cons ci ratio: 4.720742e-03	ci left: 8.003161e-01	ci right 8.041089e-01	k: 136377	n:170000
KS ci ratio: 7.407472e-01	ci left: 1.046682e-04	ci right 2.310715e-04	k: 27	n:170000
SLC26A11   170000 perm   41 sec   (4149 perm/sec)   p_kst 1.588235e-04   p_cons 8.022176e-01   p_joint 1.135294e-03

Joint ci ratio: 2.961792e-01	ci left: 8.284221e-04	ci right 1.121367e-03	k: 174	n:180000
Cons ci ratio: 4.586546e-03	ci left: 8.004525e-01	ci right 8.041378e-01	k: 144414	n:180000
KS ci ratio: 7.407507e-01	ci left: 9.885320e-05	ci right 2.182347e-04	k: 27	n:180000
SLC26A11   180000 perm   44 sec   (4085 perm/sec)   p_kst 1.500000e-04   p_cons 8.023000e-01   p_joint 9.666667e-04

Joint ci ratio: 2.920403e-01	ci left: 8.091942e-04	ci right 1.090601e-03	k: 179	n:190000
Cons ci ratio: 4.469843e-03	ci left: 8.001006e-01	ci right 8.036902e-01	k: 152361	n:190000
KS ci ratio: 6.823234e-01	ci left: 1.152026e-04	ci right 2.377520e-04	k: 32	n:190000
SLC26A11   190000 perm   47 sec   (4026 perm/sec)   p_kst 1.684211e-04   p_cons 8.019000e-01   p_joint 9.421053e-04

Joint ci ratio: 3.059743e-01	ci left: 6.947253e-04	ci right 9.501013e-04	k: 163	n:200000
Cons ci ratio: 4.352070e-03	ci left: 8.004825e-01	ci right 8.039788e-01	k: 160447	n:200000
KS ci ratio: 6.823264e-01	ci left: 1.094424e-04	ci right 2.258648e-04	k: 32	n:200000
SLC26A11   200000 perm   50 sec   (3963 perm/sec)   p_kst 1.600000e-04   p_cons 8.022350e-01   p_joint 8.150000e-04

Joint ci ratio: 3.050509e-01	ci left: 6.660384e-04	ci right 9.099868e-04	k: 164	n:210000
Cons ci ratio: 4.249757e-03	ci left: 8.003321e-01	ci right 8.037453e-01	k: 168429	n:210000
KS ci ratio: 6.722184e-01	ci left: 1.081723e-04	ci right 2.206800e-04	k: 33	n:210000
SLC26A11   210000 perm   54 sec   (3907 perm/sec)   p_kst 1.571429e-04   p_cons 8.020429e-01   p_joint 7.809524e-04

Joint ci ratio: 2.172813e-01	ci left: 1.316814e-03	ci right 1.642003e-03	k: 324	n:220000
Cons ci ratio: 4.154985e-03	ci left: 8.001462e-01	ci right 8.034822e-01	k: 176400	n:220000
KS ci ratio: 6.722210e-01	ci left: 1.032553e-04	ci right 2.106494e-04	k: 33	n:220000
SLC26A11   220000 perm   57 sec   (3852 perm/sec)   p_kst 1.500000e-04   p_cons 8.018182e-01   p_joint 1.472727e-03

Joint ci ratio: 2.232126e-01	ci left: 1.189716e-03	ci right 1.492640e-03	k: 307	n:230000
Cons ci ratio: 4.063777e-03	ci left: 8.001736e-01	ci right 8.034362e-01	k: 184416	n:230000
KS ci ratio: 6.722233e-01	ci left: 9.876583e-05	ci right 2.014910e-04	k: 33	n:230000
SLC26A11   230000 perm   61 sec   (3797 perm/sec)   p_kst 1.434783e-04   p_cons 8.018087e-01   p_joint 1.334783e-03

Joint ci ratio: 2.193315e-01	ci left: 1.183437e-03	ci right 1.478817e-03	k: 318	n:240000
Cons ci ratio: 3.978844e-03	ci left: 8.001576e-01	ci right 8.033518e-01	k: 192422	n:240000
KS ci ratio: 6.722254e-01	ci left: 9.465050e-05	ci right 1.930958e-04	k: 33	n:240000
SLC26A11   240000 perm   64 sec   (3743 perm/sec)   p_kst 1.375000e-04   p_cons 8.017583e-01   p_joint 1.325000e-03

Joint ci ratio: 2.156460e-01	ci left: 1.177703e-03	ci right 1.466058e-03	k: 329	n:250000
Cons ci ratio: 3.898238e-03	ci left: 8.002078e-01	ci right 8.033372e-01	k: 200444	n:250000
KS ci ratio: 6.443951e-01	ci left: 1.008578e-04	ci right 1.993512e-04	k: 36	n:250000
SLC26A11   250000 perm   68 sec   (3691 perm/sec)   p_kst 1.440000e-04   p_cons 8.017760e-01   p_joint 1.316000e-03

Joint ci ratio: 2.183173e-01	ci left: 1.103305e-03	ci right 1.377239e-03	k: 321	n:260000
Cons ci ratio: 3.823728e-03	ci left: 8.001390e-01	ci right 8.032081e-01	k: 208436	n:260000
KS ci ratio: 6.443969e-01	ci left: 9.697858e-05	ci right 1.916840e-04	k: 36	n:260000
SLC26A11   260000 perm   71 sec   (3641 perm/sec)   p_kst 1.384615e-04   p_cons 8.016769e-01   p_joint 1.234615e-03

Joint ci ratio: 2.203877e-01	ci left: 1.041436e-03	ci right 1.302794e-03	k: 315	n:270000
Cons ci ratio: 3.752502e-03	ci left: 8.001464e-01	ci right 8.031582e-01	k: 216447	n:270000
KS ci ratio: 6.358620e-01	ci left: 9.648850e-05	ci right 1.888826e-04	k: 37	n:270000
SLC26A11   270000 perm   75 sec   (3592 perm/sec)   p_kst 1.370370e-04   p_cons 8.016556e-01   p_joint 1.166667e-03

Joint ci ratio: 2.207423e-01	ci left: 1.000866e-03	ci right 1.252501e-03	k: 314	n:280000
Cons ci ratio: 3.684741e-03	ci left: 8.001860e-01	ci right 8.031435e-01	k: 224467	n:280000
KS ci ratio: 6.197610e-01	ci left: 9.904757e-05	ci right 1.904033e-04	k: 39	n:280000
SLC26A11   280000 perm   79 sec   (3545 perm/sec)   p_kst 1.392857e-04   p_cons 8.016679e-01   p_joint 1.121429e-03

Joint ci ratio: 2.265822e-01	ci left: 9.142663e-04	ci right 1.151060e-03	k: 298	n:290000
Cons ci ratio: 3.619738e-03	ci left: 8.002925e-01	ci right 8.031980e-01	k: 232507	n:290000
KS ci ratio: 6.121568e-01	ci left: 9.854172e-05	ci right 1.878182e-04	k: 40	n:290000
SLC26A11   290000 perm   83 sec   (3496 perm/sec)   p_kst 1.379310e-04   p_cons 8.017483e-01   p_joint 1.027586e-03

Joint ci ratio: 2.345747e-01	ci left: 8.209690e-04	ci right 1.042188e-03	k: 278	n:300000
Cons ci ratio: 3.558804e-03	ci left: 8.003255e-01	ci right 8.031820e-01	k: 240527	n:300000
KS ci ratio: 5.977506e-01	ci left: 1.009015e-04	ci right 1.892347e-04	k: 42	n:300000
SLC26A11   300000 perm   87 sec   (3452 perm/sec)   p_kst 1.400000e-04   p_cons 8.017567e-01   p_joint 9.266667e-04

Joint ci ratio: 2.341586e-01	ci left: 7.975214e-04	ci right 1.011986e-03	k: 279	n:310000
Cons ci ratio: 3.500669e-03	ci left: 8.003729e-01	ci right 8.031828e-01	k: 248552	n:310000
KS ci ratio: 5.977520e-01	ci left: 9.764655e-05	ci right 1.831305e-04	k: 42	n:310000
SLC26A11   310000 perm   91 sec   (3407 perm/sec)   p_kst 1.354839e-04   p_cons 8.017806e-01   p_joint 9.000000e-04

Joint ci ratio: 1.643332e-01	ci left: 1.629127e-03	ci right 1.923764e-03	k: 567	n:320000
Cons ci ratio: 3.444514e-03	ci left: 8.004897e-01	ci right 8.032548e-01	k: 256600	n:320000
KS ci ratio: 5.779300e-01	ci left: 1.025746e-04	ci right 1.881628e-04	k: 45	n:320000
SLC26A11   320000 perm   95 sec   (3365 perm/sec)   p_kst 1.406250e-04   p_cons 8.018750e-01   p_joint 1.771875e-03

Joint ci ratio: 1.732760e-01	ci left: 1.414310e-03	ci right 1.685473e-03	k: 510	n:330000
Cons ci ratio: 3.394049e-03	ci left: 8.003112e-01	ci right 8.030351e-01	k: 264553	n:330000
KS ci ratio: 5.717492e-01	ci left: 1.020556e-04	ci right 1.859277e-04	k: 46	n:330000
SLC26A11   330000 perm   99 sec   (3324 perm/sec)   p_kst 1.393939e-04   p_cons 8.016758e-01   p_joint 1.545455e-03

Joint ci ratio: 1.722700e-01	ci left: 1.389595e-03	ci right 1.654312e-03	k: 516	n:340000
Cons ci ratio: 3.343416e-03	ci left: 8.003646e-01	ci right 8.030479e-01	k: 272581	n:340000
KS ci ratio: 5.717504e-01	ci left: 9.905395e-05	ci right 1.804593e-04	k: 46	n:340000
SLC26A11   340000 perm   104 sec   (3283 perm/sec)   p_kst 1.352941e-04   p_cons 8.017088e-01   p_joint 1.517647e-03

Joint ci ratio: 1.889228e-01	ci left: 1.112518e-03	ci right 1.347293e-03	k: 429	n:350000
Cons ci ratio: 3.294214e-03	ci left: 8.004897e-01	ci right 8.031339e-01	k: 280635	n:350000
KS ci ratio: 5.717516e-01	ci left: 9.622379e-05	ci right 1.753035e-04	k: 46	n:350000
SLC26A11   350000 perm   108 sec   (3245 perm/sec)   p_kst 1.314286e-04   p_cons 8.018143e-01   p_joint 1.225714e-03

Joint ci ratio: 1.916219e-01	ci left: 1.049866e-03	ci right 1.274954e-03	k: 417	n:360000
Cons ci ratio: 3.247461e-03	ci left: 8.005747e-01	ci right 8.031815e-01	k: 288677	n:360000
KS ci ratio: 5.717526e-01	ci left: 9.355086e-05	ci right 1.704340e-04	k: 46	n:360000
SLC26A11   360000 perm   112 sec   (3207 perm/sec)   p_kst 1.277778e-04   p_cons 8.018806e-01   p_joint 1.158333e-03

Joint ci ratio: 1.898150e-01	ci left: 1.042080e-03	ci right 1.263149e-03	k: 425	n:370000
Cons ci ratio: 3.203271e-03	ci left: 8.005931e-01	ci right 8.031644e-01	k: 296696	n:370000
KS ci ratio: 5.717537e-01	ci left: 9.102242e-05	ci right 1.658278e-04	k: 46	n:370000
SLC26A11   370000 perm   117 sec   (3167 perm/sec)   p_kst 1.243243e-04   p_cons 8.018811e-01   p_joint 1.148649e-03

Joint ci ratio: 1.887124e-01	ci left: 1.027191e-03	ci right 1.243690e-03	k: 430	n:380000
Cons ci ratio: 3.162407e-03	ci left: 8.004524e-01	ci right 8.029904e-01	k: 304655	n:380000
KS ci ratio: 5.599632e-01	ci left: 9.313671e-05	ci right 1.674730e-04	k: 48	n:380000
SLC26A11   380000 perm   122 sec   (3126 perm/sec)   p_kst 1.263158e-04   p_cons 8.017237e-01   p_joint 1.131579e-03

Joint ci ratio: 1.859288e-01	ci left: 1.032623e-03	ci right 1.246695e-03	k: 443	n:390000
Cons ci ratio: 3.121455e-03	ci left: 8.004837e-01	ci right 8.029888e-01	k: 312678	n:390000
KS ci ratio: 5.543355e-01	ci left: 9.295132e-05	ci right 1.661007e-04	k: 49	n:390000
SLC26A11   390000 perm   126 sec   (3089 perm/sec)   p_kst 1.256410e-04   p_cons 8.017385e-01   p_joint 1.135897e-03

Joint ci ratio: 1.869885e-01	ci left: 9.948891e-04	ci right 1.202447e-03	k: 438	n:400000
Cons ci ratio: 3.083266e-03	ci left: 8.003883e-01	ci right 8.028624e-01	k: 320651	n:400000
KS ci ratio: 5.488741e-01	ci left: 9.277879e-05	ci right 1.647936e-04	k: 50	n:400000
SLC26A11   400000 perm   131 sec   (3053 perm/sec)   p_kst 1.250000e-04   p_cons 8.016275e-01   p_joint 1.095000e-03

Joint ci ratio: 1.885015e-01	ci left: 9.543509e-04	ci right 1.155247e-03	k: 431	n:410000
Cons ci ratio: 3.045462e-03	ci left: 8.004004e-01	ci right 8.028441e-01	k: 328666	n:410000
KS ci ratio: 5.488750e-01	ci left: 9.051586e-05	ci right 1.607744e-04	k: 50	n:410000
SLC26A11   410000 perm   136 sec   (3017 perm/sec)   p_kst 1.219512e-04   p_cons 8.016244e-01   p_joint 1.051220e-03

Joint ci ratio: 1.944520e-01	ci left: 8.726866e-04	ci right 1.062878e-03	k: 405	n:420000
Cons ci ratio: 3.007214e-03	ci left: 8.006030e-01	ci right 8.030166e-01	k: 336761	n:420000
KS ci ratio: 5.435719e-01	ci left: 9.041284e-05	ci right 1.596531e-04	k: 51	n:420000
SLC26A11   420000 perm   141 sec   (2983 perm/sec)   p_kst 1.214286e-04   p_cons 8.018119e-01   p_joint 9.642857e-04

Joint ci ratio: 2.002132e-01	ci left: 8.015423e-04	ci right 9.820364e-04	k: 382	n:430000
Cons ci ratio: 2.970325e-03	ci left: 8.008011e-01	ci right 8.031855e-01	k: 344858	n:430000
KS ci ratio: 5.435727e-01	ci left: 8.831019e-05	ci right 1.559403e-04	k: 51	n:430000
SLC26A11   430000 perm   146 sec   (2950 perm/sec)   p_kst 1.186047e-04   p_cons 8.019953e-01   p_joint 8.883721e-04

Joint ci ratio: 1.418834e-01	ci left: 1.608926e-03	ci right 1.856801e-03	k: 761	n:440000
Cons ci ratio: 2.938100e-03	ci left: 8.006281e-01	ci right 8.029861e-01	k: 352796	n:440000
KS ci ratio: 5.384204e-01	ci left: 8.826505e-05	ci right 1.549769e-04	k: 52	n:440000
SLC26A11   440000 perm   151 sec   (2919 perm/sec)   p_kst 1.181818e-04   p_cons 8.018091e-01   p_joint 1.729545e-03

Joint ci ratio: 1.409627e-01	ci left: 1.594607e-03	ci right 1.838548e-03	k: 771	n:450000
Cons ci ratio: 2.904704e-03	ci left: 8.007035e-01	ci right 8.030349e-01	k: 360842	n:450000
KS ci ratio: 5.285398e-01	ci left: 9.014894e-05	ci right 1.565711e-04	k: 54	n:450000
SLC26A11   450000 perm   156 sec   (2886 perm/sec)   p_kst 1.200000e-04   p_cons 8.018711e-01   p_joint 1.713333e-03

Joint ci ratio: 1.426408e-01	ci left: 1.522195e-03	ci right 1.758066e-03	k: 753	n:460000
Cons ci ratio: 2.874524e-03	ci left: 8.005426e-01	ci right 8.028492e-01	k: 368781	n:460000
KS ci ratio: 5.285405e-01	ci left: 8.818915e-05	ci right 1.531674e-04	k: 54	n:460000
SLC26A11   460000 perm   161 sec   (2855 perm/sec)   p_kst 1.173913e-04   p_cons 8.016978e-01   p_joint 1.636957e-03

Joint ci ratio: 1.436970e-01	ci left: 1.467239e-03	ci right 1.696422e-03	k: 742	n:470000
Cons ci ratio: 2.843474e-03	ci left: 8.005892e-01	ci right 8.028709e-01	k: 376814	n:470000
KS ci ratio: 5.285412e-01	ci left: 8.631276e-05	ci right 1.499086e-04	k: 54	n:470000
SLC26A11   470000 perm   176 sec   (2666 perm/sec)   p_kst 1.148936e-04   p_cons 8.017319e-01   p_joint 1.578723e-03

Joint ci ratio: 1.516774e-01	ci left: 1.284175e-03	ci right 1.496916e-03	k: 666	n:480000
Cons ci ratio: 2.813373e-03	ci left: 8.006381e-01	ci right 8.028958e-01	k: 384849	n:480000
KS ci ratio: 5.238009e-01	ci left: 8.632098e-05	ci right 1.491434e-04	k: 55	n:480000
SLC26A11   480000 perm   182 sec   (2631 perm/sec)   p_kst 1.145833e-04   p_cons 8.017688e-01   p_joint 1.387500e-03

Joint ci ratio: 1.503314e-01	ci left: 1.281532e-03	ci right 1.491781e-03	k: 678	n:490000
Cons ci ratio: 2.784762e-03	ci left: 8.006217e-01	ci right 8.028564e-01	k: 392853	n:490000
KS ci ratio: 5.191860e-01	ci left: 8.633132e-05	ci right 1.484070e-04	k: 56	n:490000
SLC26A11   490000 perm   188 sec   (2607 perm/sec)   p_kst 1.142857e-04   p_cons 8.017408e-01   p_joint 1.383673e-03

Joint ci ratio: 1.482704e-01	ci left: 1.292482e-03	ci right 1.501364e-03	k: 697	n:500000
Cons ci ratio: 2.756434e-03	ci left: 8.006722e-01	ci right 8.028843e-01	k: 400890	n:500000
KS ci ratio: 5.146908e-01	ci left: 8.634359e-05	ci right 1.476977e-04	k: 57	n:500000
SLC26A11   500000 perm   202 sec   (2470 perm/sec)   p_kst 1.140000e-04   p_cons 8.017800e-01   p_joint 1.394000e-03

Joint ci ratio: 1.455821e-01	ci left: 1.316247e-03	ci right 1.524777e-03	k: 723	n:510000
Cons ci ratio: 2.729744e-03	ci left: 8.006286e-01	ci right 8.028190e-01	k: 408880	n:510000
KS ci ratio: 5.018741e-01	ci left: 8.977826e-05	ci right 1.514325e-04	k: 60	n:510000
SLC26A11   510000 perm   211 sec   (2417 perm/sec)   p_kst 1.176471e-04   p_cons 8.017255e-01   p_joint 1.417647e-03

Joint ci ratio: 1.445875e-01	ci left: 1.309467e-03	ci right 1.515383e-03	k: 733	n:520000
Cons ci ratio: 2.703586e-03	ci left: 8.006136e-01	ci right 8.027830e-01	k: 416884	n:520000
KS ci ratio: 5.018746e-01	ci left: 8.805174e-05	ci right 1.485204e-04	k: 60	n:520000
SLC26A11   520000 perm   217 sec   (2401 perm/sec)   p_kst 1.153846e-04   p_cons 8.017000e-01   p_joint 1.409615e-03

Joint ci ratio: 1.435166e-01	ci left: 1.304767e-03	ci right 1.508293e-03	k: 744	n:530000
Cons ci ratio: 2.677959e-03	ci left: 8.006240e-01	ci right 8.027727e-01	k: 424901	n:530000
KS ci ratio: 5.018752e-01	ci left: 8.639036e-05	ci right 1.457182e-04	k: 60	n:530000
SLC26A11   530000 perm   224 sec   (2369 perm/sec)   p_kst 1.132075e-04   p_cons 8.017000e-01   p_joint 1.403774e-03

Joint ci ratio: 1.421868e-01	ci left: 1.305604e-03	ci right 1.507214e-03	k: 758	n:540000
Cons ci ratio: 2.653217e-03	ci left: 8.006136e-01	ci right 8.027424e-01	k: 432907	n:540000
KS ci ratio: 4.978115e-01	ci left: 8.640878e-05	ci right 1.451033e-04	k: 61	n:540000
SLC26A11   540000 perm   230 sec   (2352 perm/sec)   p_kst 1.129630e-04   p_cons 8.016796e-01   p_joint 1.403704e-03

Joint ci ratio: 1.523785e-01	ci left: 1.110233e-03	ci right 1.295085e-03	k: 660	n:550000
Cons ci ratio: 2.628096e-03	ci left: 8.007312e-01	ci right 8.028402e-01	k: 440983	n:550000
KS ci ratio: 4.938448e-01	ci left: 8.642841e-05	ci right 1.445090e-04	k: 62	n:550000
SLC26A11   550000 perm   235 sec   (2336 perm/sec)   p_kst 1.127273e-04   p_cons 8.017873e-01   p_joint 1.200000e-03

Joint ci ratio: 1.621260e-01	ci left: 9.583068e-04	ci right 1.129066e-03	k: 583	n:560000
Cons ci ratio: 2.605869e-03	ci left: 8.005763e-01	ci right 8.026670e-01	k: 448909	n:560000
KS ci ratio: 4.938454e-01	ci left: 8.488503e-05	ci right 1.419285e-04	k: 62	n:560000
SLC26A11   560000 perm   242 sec   (2315 perm/sec)   p_kst 1.107143e-04   p_cons 8.016232e-01   p_joint 1.041071e-03

Joint ci ratio: 1.654209e-01	ci left: 9.027950e-04	ci right 1.067257e-03	k: 560	n:570000
Cons ci ratio: 2.583298e-03	ci left: 8.005377e-01	ci right 8.026101e-01	k: 456898	n:570000
KS ci ratio: 4.938459e-01	ci left: 8.339580e-05	ci right 1.394386e-04	k: 62	n:570000
SLC26A11   570000 perm   249 sec   (2288 perm/sec)   p_kst 1.087719e-04   p_cons 8.015754e-01   p_joint 9.824561e-04

Joint ci ratio: 1.641099e-01	ci left: 9.021069e-04	ci right 1.065013e-03	k: 569	n:580000
Cons ci ratio: 2.561011e-03	ci left: 8.005368e-01	ci right 8.025913e-01	k: 464908	n:580000
KS ci ratio: 4.899725e-01	ci left: 8.346810e-05	ci right 1.389709e-04	k: 63	n:580000
SLC26A11   580000 perm   269 sec   (2153 perm/sec)   p_kst 1.086207e-04   p_cons 8.015655e-01   p_joint 9.810345e-04

Joint ci ratio: 1.631118e-01	ci left: 8.981954e-04	ci right 1.059312e-03	k: 576	n:590000
Cons ci ratio: 2.538966e-03	ci left: 8.005767e-01	ci right 8.026136e-01	k: 472942	n:590000
KS ci ratio: 4.861890e-01	ci left: 8.353961e-05	ci right 1.385175e-04	k: 64	n:590000
SLC26A11   590000 perm   280 sec   (2106 perm/sec)   p_kst 1.084746e-04   p_cons 8.015966e-01   p_joint 9.762712e-04

Joint ci ratio: 1.622708e-01	ci left: 8.928182e-04	ci right 1.052063e-03	k: 582	n:600000
Cons ci ratio: 2.518181e-03	ci left: 8.005269e-01	ci right 8.025469e-01	k: 480923	n:600000
KS ci ratio: 4.824917e-01	ci left: 8.361034e-05	ci right 1.380777e-04	k: 65	n:600000
SLC26A11   600000 perm   287 sec   (2093 perm/sec)   p_kst 1.083333e-04   p_cons 8.015383e-01   p_joint 9.700000e-04

Joint ci ratio: 1.629731e-01	ci left: 8.703178e-04	ci right 1.026288e-03	k: 577	n:610000
Cons ci ratio: 2.497241e-03	ci left: 8.005625e-01	ci right 8.025658e-01	k: 488955	n:610000
KS ci ratio: 4.788775e-01	ci left: 8.368029e-05	ci right 1.376507e-04	k: 66	n:610000
SLC26A11   610000 perm   293 sec   (2082 perm/sec)   p_kst 1.081967e-04   p_cons 8.015656e-01   p_joint 9.459016e-04

Joint ci ratio: 1.613069e-01	ci left: 8.748501e-04	ci right 1.029874e-03	k: 589	n:620000
Cons ci ratio: 2.477807e-03	ci left: 8.004694e-01	ci right 8.024568e-01	k: 496908	n:620000
KS ci ratio: 4.718859e-01	ci left: 8.516978e-05	ci right 1.390402e-04	k: 68	n:620000
SLC26A11   620000 perm   299 sec   (2072 perm/sec)   p_kst 1.096774e-04   p_cons 8.014645e-01   p_joint 9.500000e-04

Joint ci ratio: 1.600906e-01	ci left: 8.746748e-04	ci right 1.028386e-03	k: 598	n:630000
Cons ci ratio: 2.458353e-03	ci left: 8.004397e-01	ci right 8.024115e-01	k: 504899	n:630000
KS ci ratio: 4.685032e-01	ci left: 8.521703e-05	ci right 1.386074e-04	k: 69	n:630000
SLC26A11   630000 perm   306 sec   (2061 perm/sec)   p_kst 1.095238e-04   p_cons 8.014270e-01   p_joint 9.492063e-04

Joint ci ratio: 1.582513e-01	ci left: 8.820120e-04	ci right 1.035063e-03	k: 612	n:640000
Cons ci ratio: 2.438572e-03	ci left: 8.005128e-01	ci right 8.024688e-01	k: 512955	n:640000
KS ci ratio: 4.685036e-01	ci left: 8.388550e-05	ci right 1.364417e-04	k: 69	n:640000
SLC26A11   640000 perm   312 sec   (2049 perm/sec)   p_kst 1.078125e-04   p_cons 8.014922e-01   p_joint 9.562500e-04

Joint ci ratio: 1.596931e-01	ci left: 8.521917e-04	ci right 1.001545e-03	k: 601	n:650000
Cons ci ratio: 2.419026e-03	ci left: 8.006145e-01	ci right 8.025551e-01	k: 521031	n:650000
KS ci ratio: 4.651926e-01	ci left: 8.395237e-05	ci right 1.360608e-04	k: 70	n:650000
SLC26A11   650000 perm   319 sec   (2038 perm/sec)   p_kst 1.076923e-04   p_cons 8.015862e-01   p_joint 9.246154e-04

Joint ci ratio: 1.577394e-01	ci left: 8.611046e-04	ci right 1.009999e-03	k: 616	n:660000
Cons ci ratio: 2.399920e-03	ci left: 8.007163e-01	ci right 8.026417e-01	k: 529109	n:660000
KS ci ratio: 4.651930e-01	ci left: 8.268035e-05	ci right 1.339993e-04	k: 70	n:660000
SLC26A11   660000 perm   326 sec   (2027 perm/sec)   p_kst 1.060606e-04   p_cons 8.016803e-01   p_joint 9.333333e-04

Joint ci ratio: 1.564763e-01	ci left: 8.625910e-04	ci right 1.010436e-03	k: 626	n:670000
Cons ci ratio: 2.382130e-03	ci left: 8.006984e-01	ci right 8.026095e-01	k: 537109	n:670000
KS ci ratio: 4.619513e-01	ci left: 8.276446e-05	ci right 1.336651e-04	k: 71	n:670000
SLC26A11   670000 perm   332 sec   (2017 perm/sec)   p_kst 1.059701e-04   p_cons 8.016552e-01   p_joint 9.343284e-04

Joint ci ratio: 1.578696e-01	ci left: 8.343646e-04	ci right 9.787653e-04	k: 615	n:680000
Cons ci ratio: 2.364545e-03	ci left: 8.007061e-01	ci right 8.026031e-01	k: 545126	n:680000
KS ci ratio: 4.587763e-01	ci left: 8.284731e-05	ci right 1.333395e-04	k: 72	n:680000
SLC26A11   680000 perm   339 sec   (2006 perm/sec)   p_kst 1.058824e-04   p_cons 8.016559e-01   p_joint 9.044118e-04

Joint ci ratio: 1.571067e-01	ci left: 8.306252e-04	ci right 9.736185e-04	k: 621	n:690000
Cons ci ratio: 2.346819e-03	ci left: 8.007848e-01	ci right 8.026677e-01	k: 553192	n:690000
KS ci ratio: 4.587767e-01	ci left: 8.164662e-05	ci right 1.314070e-04	k: 72	n:690000
SLC26A11   690000 perm   346 sec   (1996 perm/sec)   p_kst 1.043478e-04   p_cons 8.017275e-01   p_joint 9.000000e-04

Joint ci ratio: 1.689381e-01	ci left: 7.036443e-04	ci right 8.348298e-04	k: 537	n:700000
Cons ci ratio: 2.329883e-03	ci left: 8.008069e-01	ci right 8.026763e-01	k: 561220	n:700000
KS ci ratio: 4.587770e-01	ci left: 8.048022e-05	ci right 1.295298e-04	k: 72	n:700000
SLC26A11   700000 perm   353 sec   (1986 perm/sec)   p_kst 1.028571e-04   p_cons 8.017429e-01   p_joint 7.671429e-04

Joint ci ratio: 1.678498e-01	ci left: 7.031774e-04	ci right 8.333459e-04	k: 544	n:710000
Cons ci ratio: 2.313555e-03	ci left: 8.007946e-01	ci right 8.026508e-01	k: 569224	n:710000
KS ci ratio: 4.556667e-01	ci left: 8.059288e-05	ci right 1.292751e-04	k: 73	n:710000
SLC26A11   710000 perm   359 sec   (1975 perm/sec)   p_kst 1.028169e-04   p_cons 8.017239e-01   p_joint 7.661972e-04

Joint ci ratio: 1.831112e-01	ci left: 5.778713e-04	ci right 6.956511e-04	k: 457	n:720000
Cons ci ratio: 2.297475e-03	ci left: 8.007952e-01	ci right 8.026385e-01	k: 577237	n:720000
KS ci ratio: 4.467013e-01	ci left: 8.316665e-05	ci right 1.321168e-04	k: 76	n:720000
SLC26A11   720000 perm   382 sec   (1884 perm/sec)   p_kst 1.055556e-04   p_cons 8.017181e-01   p_joint 6.347222e-04

Joint ci ratio: 1.817276e-01	ci left: 5.791065e-04	ci right 6.961480e-04	k: 464	n:730000
Cons ci ratio: 2.281991e-03	ci left: 8.007588e-01	ci right 8.025895e-01	k: 585223	n:730000
KS ci ratio: 4.438286e-01	ci left: 8.324360e-05	ci right 1.318295e-04	k: 77	n:730000
SLC26A11   730000 perm   389 sec   (1875 perm/sec)   p_kst 1.054795e-04   p_cons 8.016753e-01   p_joint 6.356164e-04

Joint ci ratio: 1.823178e-01	ci left: 5.674111e-04	ci right 6.825024e-04	k: 461	n:740000
Cons ci ratio: 2.267124e-03	ci left: 8.006800e-01	ci right 8.024987e-01	k: 593177	n:740000
KS ci ratio: 4.438289e-01	ci left: 8.211868e-05	ci right 1.300480e-04	k: 77	n:740000
SLC26A11   740000 perm   396 sec   (1867 perm/sec)   p_kst 1.040541e-04   p_cons 8.015905e-01   p_joint 6.229730e-04

Joint ci ratio: 1.794273e-01	ci left: 5.789404e-04	ci right 6.943065e-04	k: 476	n:750000
Cons ci ratio: 2.252053e-03	ci left: 8.006729e-01	ci right 8.024794e-01	k: 601183	n:750000
KS ci ratio: 4.276828e-01	ci left: 8.814632e-05	ci right 1.371862e-04	k: 83	n:750000
SLC26A11   750000 perm   404 sec   (1858 perm/sec)   p_kst 1.106667e-04   p_cons 8.015773e-01   p_joint 6.346667e-04

Joint ci ratio: 1.807601e-01	ci left: 5.625270e-04	ci right 6.755462e-04	k: 469	n:760000
Cons ci ratio: 2.237843e-03	ci left: 8.005856e-01	ci right 8.023805e-01	k: 609128	n:760000
KS ci ratio: 4.251596e-01	ci left: 8.816105e-05	ci right 1.368373e-04	k: 84	n:760000
SLC26A11   760000 perm   411 sec   (1849 perm/sec)   p_kst 1.105263e-04   p_cons 8.014842e-01   p_joint 6.171053e-04

Joint ci ratio: 1.796172e-01	ci left: 5.626623e-04	ci right 6.749161e-04	k: 475	n:770000
Cons ci ratio: 2.223453e-03	ci left: 8.005644e-01	ci right 8.023476e-01	k: 617122	n:770000
KS ci ratio: 4.226806e-01	ci left: 8.817622e-05	ci right 1.364967e-04	k: 85	n:770000
SLC26A11   770000 perm   419 sec   (1839 perm/sec)   p_kst 1.103896e-04   p_cons 8.014571e-01   p_joint 6.168831e-04

Joint ci ratio: 1.786814e-01	ci left: 5.615714e-04	ci right 6.729608e-04	k: 480	n:780000
Cons ci ratio: 2.209159e-03	ci left: 8.005694e-01	ci right 8.023412e-01	k: 625136	n:780000
KS ci ratio: 4.202444e-01	ci left: 8.819181e-05	ci right 1.361640e-04	k: 86	n:780000
SLC26A11   780000 perm   426 sec   (1830 perm/sec)   p_kst 1.102564e-04   p_cons 8.014564e-01   p_joint 6.153846e-04

Joint ci ratio: 1.783115e-01	ci left: 5.568813e-04	ci right 6.670871e-04	k: 482	n:790000
Cons ci ratio: 2.195207e-03	ci left: 8.005642e-01	ci right 8.023247e-01	k: 633142	n:790000
KS ci ratio: 4.202447e-01	ci left: 8.707545e-05	ci right 1.344404e-04	k: 86	n:790000
SLC26A11   790000 perm   434 sec   (1821 perm/sec)   p_kst 1.088608e-04   p_cons 8.014456e-01   p_joint 6.101266e-04

Joint ci ratio: 1.794308e-01	ci left: 5.427557e-04	ci right 6.509135e-04	k: 476	n:800000
Cons ci ratio: 2.181414e-03	ci left: 8.005742e-01	ci right 8.023237e-01	k: 641160	n:800000
KS ci ratio: 4.131808e-01	ci left: 8.934381e-05	ci right 1.369009e-04	k: 89	n:800000
SLC26A11   800000 perm   441 sec   (1812 perm/sec)   p_kst 1.112500e-04   p_cons 8.014500e-01   p_joint 5.950000e-04

Joint ci ratio: 1.784979e-01	ci left: 5.419514e-04	ci right 6.493267e-04	k: 481	n:810000
Cons ci ratio: 2.168264e-03	ci left: 8.005270e-01	ci right 8.022659e-01	k: 649132	n:810000
KS ci ratio: 4.131811e-01	ci left: 8.824079e-05	ci right 1.352108e-04	k: 89	n:810000
SLC26A11   810000 perm   449 sec   (1803 perm/sec)   p_kst 1.098765e-04   p_cons 8.013975e-01   p_joint 5.938272e-04

Joint ci ratio: 1.779453e-01	ci left: 5.388375e-04	ci right 6.452297e-04	k: 484	n:820000
Cons ci ratio: 2.154729e-03	ci left: 8.005727e-01	ci right 8.023008e-01	k: 657179	n:820000
KS ci ratio: 4.109046e-01	ci left: 8.825776e-05	ci right 1.349072e-04	k: 90	n:820000
SLC26A11   820000 perm   457 sec   (1794 perm/sec)   p_kst 1.097561e-04   p_cons 8.014378e-01   p_joint 5.902439e-04

Joint ci ratio: 1.768547e-01	ci left: 5.392534e-04	ci right 6.450055e-04	k: 490	n:830000
Cons ci ratio: 2.142248e-03	ci left: 8.004978e-01	ci right 8.022157e-01	k: 665127	n:830000
KS ci ratio: 4.109049e-01	ci left: 8.719440e-05	ci right 1.332818e-04	k: 90	n:830000
SLC26A11   830000 perm   465 sec   (1785 perm/sec)   p_kst 1.084337e-04   p_cons 8.013578e-01   p_joint 5.903614e-04

Joint ci ratio: 1.910011e-01	ci left: 4.533294e-04	ci right 5.501692e-04	k: 420	n:840000
Cons ci ratio: 2.129503e-03	ci left: 8.004963e-01	ci right 8.022040e-01	k: 673135	n:840000
KS ci ratio: 4.064623e-01	ci left: 8.829253e-05	ci right 1.343196e-04	k: 92	n:840000
SLC26A11   840000 perm   473 sec   (1776 perm/sec)   p_kst 1.095238e-04   p_cons 8.013512e-01   p_joint 5.000000e-04

Joint ci ratio: 1.896543e-01	ci left: 4.547187e-04	ci right 5.510913e-04	k: 426	n:850000
Cons ci ratio: 2.117084e-03	ci left: 8.004796e-01	ci right 8.021772e-01	k: 681130	n:850000
KS ci ratio: 4.021608e-01	ci left: 8.936745e-05	ci right 1.353303e-04	k: 94	n:850000
SLC26A11   850000 perm   481 sec   (1768 perm/sec)   p_kst 1.105882e-04   p_cons 8.013294e-01   p_joint 5.011765e-04

Joint ci ratio: 1.889918e-01	ci left: 4.527542e-04	ci right 5.483369e-04	k: 429	n:860000
Cons ci ratio: 2.104811e-03	ci left: 8.004737e-01	ci right 8.021615e-01	k: 689134	n:860000
KS ci ratio: 4.000608e-01	ci left: 8.937377e-05	ci right 1.350362e-04	k: 95	n:860000
SLC26A11   860000 perm   489 sec   (1759 perm/sec)   p_kst 1.104651e-04   p_cons 8.013186e-01   p_joint 4.988372e-04

Joint ci ratio: 1.883362e-01	ci left: 4.508355e-04	ci right 5.456452e-04	k: 432	n:870000
Cons ci ratio: 2.093111e-03	ci left: 8.004128e-01	ci right 8.020910e-01	k: 697090	n:870000
KS ci ratio: 4.000610e-01	ci left: 8.834647e-05	ci right 1.334841e-04	k: 95	n:870000
SLC26A11   870000 perm   497 sec   (1750 perm/sec)   p_kst 1.091954e-04   p_cons 8.012529e-01   p_joint 4.965517e-04

Joint ci ratio: 1.870446e-01	ci left: 4.522103e-04	ci right 5.465828e-04	k: 438	n:880000
Cons ci ratio: 2.081173e-03	ci left: 8.004192e-01	ci right 8.020879e-01	k: 705104	n:880000
KS ci ratio: 3.979935e-01	ci left: 8.836485e-05	ci right 1.332171e-04	k: 96	n:880000
SLC26A11   880000 perm   506 sec   (1741 perm/sec)   p_kst 1.090909e-04   p_cons 8.012545e-01   p_joint 4.977273e-04

Joint ci ratio: 1.655980e-01	ci left: 5.771094e-04	ci right 6.823646e-04	k: 559	n:890000
Cons ci ratio: 2.195082e-03	ci left: 7.809562e-01	ci right 7.826734e-01	k: 695816	n:890000
KS ci ratio: 3.959578e-01	ci left: 8.838341e-05	ci right 1.329555e-04	k: 97	n:890000
SLC26A11   890000 perm   514 sec   (1732 perm/sec)   p_kst 1.089888e-04   p_cons 7.818157e-01   p_joint 6.280899e-04

Joint ci ratio: 1.647180e-01	ci left: 5.770881e-04	ci right 6.817247e-04	k: 565	n:900000
Cons ci ratio: 2.182363e-03	ci left: 7.810376e-01	ci right 7.827450e-01	k: 703703	n:900000
KS ci ratio: 3.919780e-01	ci left: 8.940344e-05	ci right 1.339195e-04	k: 99	n:900000
SLC26A11   900000 perm   522 sec   (1723 perm/sec)   p_kst 1.100000e-04   p_cons 7.818922e-01   p_joint 6.277778e-04

Joint ci ratio: 1.271821e-01	ci left: 9.765216e-04	ci right 1.110204e-03	k: 948	n:910000
Cons ci ratio: 2.170171e-03	ci left: 7.810688e-01	ci right 7.827668e-01	k: 711546	n:910000
KS ci ratio: 3.881159e-01	ci left: 9.040325e-05	ci right 1.348601e-04	k: 101	n:910000
SLC26A11   910000 perm   531 sec   (1714 perm/sec)   p_kst 1.109890e-04   p_cons 7.819187e-01   p_joint 1.041758e-03

Joint ci ratio: 1.265834e-01	ci left: 9.753793e-04	ci right 1.108229e-03	k: 957	n:920000
Cons ci ratio: 2.158627e-03	ci left: 7.810286e-01	ci right 7.827174e-01	k: 719324	n:920000
KS ci ratio: 3.881161e-01	ci left: 8.942060e-05	ci right 1.333942e-04	k: 101	n:920000
SLC26A11   920000 perm   540 sec   (1705 perm/sec)   p_kst 1.097826e-04   p_cons 7.818739e-01   p_joint 1.040217e-03

Joint ci ratio: 1.256036e-01	ci left: 9.805118e-04	ci right 1.112950e-03	k: 972	n:930000
Cons ci ratio: 2.147253e-03	ci left: 7.809915e-01	ci right 7.826713e-01	k: 727104	n:930000
KS ci ratio: 3.862275e-01	ci left: 8.942969e-05	ci right 1.331393e-04	k: 102	n:930000
SLC26A11   930000 perm   548 sec   (1696 perm/sec)   p_kst 1.096774e-04   p_cons 7.818323e-01   p_joint 1.045161e-03

Joint ci ratio: 1.250906e-01	ci left: 9.783245e-04	ci right 1.109888e-03	k: 980	n:940000
Cons ci ratio: 2.135696e-03	ci left: 7.810127e-01	ci right 7.826835e-01	k: 734938	n:940000
KS ci ratio: 3.862277e-01	ci left: 8.847830e-05	ci right 1.317230e-04	k: 102	n:940000
SLC26A11   940000 perm   557 sec   (1688 perm/sec)   p_kst 1.085106e-04   p_cons 7.818489e-01   p_joint 1.042553e-03

Joint ci ratio: 1.247734e-01	ci left: 9.731249e-04	ci right 1.103632e-03	k: 985	n:950000
Cons ci ratio: 2.124822e-03	ci left: 7.809533e-01	ci right 7.826155e-01	k: 742696	n:950000
KS ci ratio: 3.843664e-01	ci left: 8.849761e-05	ci right 1.314905e-04	k: 103	n:950000
SLC26A11   950000 perm   566 sec   (1677 perm/sec)   p_kst 1.084211e-04   p_cons 7.817853e-01   p_joint 1.036842e-03

Joint ci ratio: 1.763237e-01	ci left: 4.692148e-04	ci right 5.609259e-04	k: 493	n:960000
Cons ci ratio: 2.053558e-03	ci left: 7.906641e-01	ci right 7.922904e-01	k: 759819	n:960000
KS ci ratio: 3.843666e-01	ci left: 8.757575e-05	ci right 1.301209e-04	k: 103	n:960000
SLC26A11   960000 perm   575 sec   (1668 perm/sec)   p_kst 1.072917e-04   p_cons 7.914781e-01   p_joint 5.135417e-04

Joint ci ratio: 1.651603e-01	ci left: 5.324765e-04	ci right 6.293091e-04	k: 562	n:970000
Cons ci ratio: 2.042593e-03	ci left: 7.907253e-01	ci right 7.923431e-01	k: 767789	n:970000
KS ci ratio: 3.825319e-01	ci left: 8.760446e-05	ci right 1.299093e-04	k: 104	n:970000
SLC26A11   970000 perm   584 sec   (1660 perm/sec)   p_kst 1.072165e-04   p_cons 7.915351e-01   p_joint 5.793814e-04

Joint ci ratio: 1.641429e-01	ci left: 5.338916e-04	ci right 6.303245e-04	k: 569	n:980000
Cons ci ratio: 2.032191e-03	ci left: 7.907219e-01	ci right 7.923315e-01	k: 775697	n:980000
KS ci ratio: 3.789398e-01	ci left: 8.855604e-05	ci right 1.308189e-04	k: 106	n:980000
SLC26A11   980000 perm   593 sec   (1652 perm/sec)   p_kst 1.081633e-04   p_cons 7.915276e-01   p_joint 5.806122e-04

Joint ci ratio: 1.657514e-01	ci left: 5.178459e-04	ci right 6.123886e-04	k: 558	n:990000
Cons ci ratio: 2.081919e-03	ci left: 7.808941e-01	ci right 7.825225e-01	k: 773892	n:990000
KS ci ratio: 3.737364e-01	ci left: 9.040523e-05	ci right 1.328131e-04	k: 109	n:990000
SLC26A11   990000 perm   603 sec   (1643 perm/sec)   p_kst 1.101010e-04   p_cons 7.817091e-01   p_joint 5.636364e-04

Joint ci ratio: 1.654560e-01	ci left: 5.145845e-04	ci right 6.083477e-04	k: 560	n:1000000
Cons ci ratio: 2.070937e-03	ci left: 7.809882e-01	ci right 7.826082e-01	k: 781799	n:1000000
KS ci ratio: 3.737366e-01	ci left: 8.950117e-05	ci right 1.314850e-04	k: 109	n:1000000
SLC26A11   1000000 perm   612 sec   (1635 perm/sec)   p_kst 1.090000e-04   p_cons 7.817990e-01   p_joint 5.600000e-04

Joint ci ratio: 1.653091e-01	ci left: 5.104386e-04	ci right 6.033556e-04	k: 561	n:1010000
Cons ci ratio: 2.060295e-03	ci left: 7.810527e-01	ci right 7.826645e-01	k: 789678	n:1010000
KS ci ratio: 3.737368e-01	ci left: 8.861501e-05	ci right 1.301831e-04	k: 109	n:1010000
SLC26A11   1010000 perm   621 sec   (1626 perm/sec)   p_kst 1.079208e-04   p_cons 7.818594e-01   p_joint 5.554455e-04

Joint ci ratio: 1.232849e-01	ci left: 9.291399e-04	ci right 1.052153e-03	k: 1009	n:1020000
Cons ci ratio: 2.049761e-03	ci left: 7.811248e-01	ci right 7.827285e-01	k: 797566	n:1020000
KS ci ratio: 3.703847e-01	ci left: 8.952369e-05	ci right 1.310501e-04	k: 111	n:1020000
SLC26A11   1020000 perm   631 sec   (1618 perm/sec)   p_kst 1.088235e-04   p_cons 7.819275e-01   p_joint 9.892157e-04

Joint ci ratio: 1.503861e-01	ci left: 6.096449e-04	ci right 7.097026e-04	k: 678	n:1030000
Cons ci ratio: 2.039881e-03	ci left: 7.811129e-01	ci right 7.827088e-01	k: 805369	n:1030000
KS ci ratio: 3.959608e-01	ci left: 7.637003e-05	ci right 1.148840e-04	k: 97	n:1030000
SLC26A11   1030000 perm   640 sec   (1610 perm/sec)   p_kst 9.417476e-05   p_cons 7.819117e-01   p_joint 6.582524e-04

Joint ci ratio: 1.497261e-01	ci left: 6.093355e-04	ci right 7.088642e-04	k: 684	n:1040000
Cons ci ratio: 2.029891e-03	ci left: 7.811436e-01	ci right 7.827318e-01	k: 813216	n:1040000
KS ci ratio: 3.919810e-01	ci left: 7.736826e-05	ci right 1.158920e-04	k: 99	n:1040000
SLC26A11   1040000 perm   649 sec   (1602 perm/sec)   p_kst 9.519231e-05   p_cons 7.819385e-01   p_joint 6.576923e-04

Joint ci ratio: 1.487519e-01	ci left: 6.117837e-04	ci right 7.110043e-04	k: 693	n:1050000
Cons ci ratio: 2.020351e-03	ci left: 7.811222e-01	ci right 7.827029e-01	k: 821009	n:1050000
KS ci ratio: 3.919811e-01	ci left: 7.663142e-05	ci right 1.147883e-04	k: 99	n:1050000
SLC26A11   1050000 perm   659 sec   (1594 perm/sec)   p_kst 9.428571e-05   p_cons 7.819133e-01   p_joint 6.600000e-04

Joint ci ratio: 1.476914e-01	ci left: 6.150964e-04	ci right 7.140802e-04	k: 703	n:1060000
Cons ci ratio: 2.010643e-03	ci left: 7.811523e-01	ci right 7.827254e-01	k: 828856	n:1060000
KS ci ratio: 3.881190e-01	ci left: 7.761023e-05	ci right 1.157763e-04	k: 101	n:1060000
SLC26A11   1060000 perm   669 sec   (1585 perm/sec)   p_kst 9.528302e-05   p_cons 7.819396e-01   p_joint 6.632075e-04

Joint ci ratio: 1.468593e-01	ci left: 6.165490e-04	ci right 7.151585e-04	k: 711	n:1070000
Cons ci ratio: 2.001436e-03	ci left: 7.811201e-01	ci right 7.826859e-01	k: 836637	n:1070000
KS ci ratio: 3.862303e-01	ci left: 7.772851e-05	ci right 1.157194e-04	k: 102	n:1070000
SLC26A11   1070000 perm   679 sec   (1577 perm/sec)   p_kst 9.532710e-05   p_cons 7.819037e-01   p_joint 6.644860e-04

Joint ci ratio: 1.462444e-01	ci left: 6.161920e-04	ci right 7.142958e-04	k: 717	n:1080000
Cons ci ratio: 1.992717e-03	ci left: 7.810263e-01	ci right 7.825851e-01	k: 844351	n:1080000
KS ci ratio: 3.862305e-01	ci left: 7.700879e-05	ci right 1.146480e-04	k: 102	n:1080000
SLC26A11   1080000 perm   688 sec   (1570 perm/sec)   p_kst 9.444444e-05   p_cons 7.818065e-01   p_joint 6.638889e-04

Joint ci ratio: 1.457379e-01	ci left: 6.149584e-04	ci right 7.124972e-04	k: 722	n:1090000
Cons ci ratio: 1.983598e-03	ci left: 7.810225e-01	ci right 7.825742e-01	k: 852161	n:1090000
KS ci ratio: 3.843691e-01	ci left: 7.713085e-05	ci right 1.146020e-04	k: 103	n:1090000
SLC26A11   1090000 perm   698 sec   (1562 perm/sec)   p_kst 9.449541e-05   p_cons 7.817991e-01   p_joint 6.623853e-04

Joint ci ratio: 1.449382e-01	ci left: 6.163762e-04	ci right 7.135570e-04	k: 730	n:1100000
Cons ci ratio: 1.974740e-03	ci left: 7.809951e-01	ci right 7.825398e-01	k: 859945	n:1100000
KS ci ratio: 3.843693e-01	ci left: 7.642966e-05	ci right 1.135602e-04	k: 103	n:1100000
SLC26A11   1100000 perm   707 sec   (1555 perm/sec)   p_kst 9.363636e-05   p_cons 7.817682e-01   p_joint 6.636364e-04

Joint ci ratio: 1.443470e-01	ci left: 6.160331e-04	ci right 7.127294e-04	k: 736	n:1110000
Cons ci ratio: 1.966186e-03	ci left: 7.809357e-01	ci right 7.824736e-01	k: 867693	n:1110000
KS ci ratio: 3.843694e-01	ci left: 7.574110e-05	ci right 1.125371e-04	k: 103	n:1110000
SLC26A11   1110000 perm   717 sec   (1547 perm/sec)   p_kst 9.279279e-05   p_cons 7.817054e-01   p_joint 6.630631e-04

Joint ci ratio: 1.443475e-01	ci left: 6.105326e-04	ci right 7.063659e-04	k: 736	n:1120000
Cons ci ratio: 1.957537e-03	ci left: 7.809132e-01	ci right 7.824443e-01	k: 875481	n:1120000
KS ci ratio: 3.843696e-01	ci left: 7.506483e-05	ci right 1.115324e-04	k: 103	n:1120000
SLC26A11   1120000 perm   727 sec   (1540 perm/sec)   p_kst 9.196429e-05   p_cons 7.816795e-01   p_joint 6.571429e-04

Joint ci ratio: 1.439575e-01	ci left: 6.085418e-04	ci right 7.037824e-04	k: 740	n:1130000
Cons ci ratio: 1.948956e-03	ci left: 7.808991e-01	ci right 7.824234e-01	k: 883278	n:1130000
KS ci ratio: 3.843698e-01	ci left: 7.440054e-05	ci right 1.105453e-04	k: 103	n:1130000
SLC26A11   1130000 perm   737 sec   (1533 perm/sec)   p_kst 9.115044e-05   p_cons 7.816619e-01   p_joint 6.548673e-04

Joint ci ratio: 1.434744e-01	ci left: 6.074319e-04	ci right 7.021524e-04	k: 745	n:1140000
Cons ci ratio: 1.940632e-03	ci left: 7.808597e-01	ci right 7.823774e-01	k: 891046	n:1140000
KS ci ratio: 3.825350e-01	ci left: 7.454053e-05	ci right 1.105370e-04	k: 104	n:1140000
SLC26A11   1140000 perm   747 sec   (1525 perm/sec)   p_kst 9.122807e-05   p_cons 7.816193e-01   p_joint 6.535088e-04

Joint ci ratio: 1.423338e-01	ci left: 6.122117e-04	ci right 7.068543e-04	k: 757	n:1150000
Cons ci ratio: 1.932079e-03	ci left: 7.808803e-01	ci right 7.823913e-01	k: 898882	n:1150000
KS ci ratio: 3.789429e-01	ci left: 7.546505e-05	ci right 1.114806e-04	k: 106	n:1150000
SLC26A11   1150000 perm   758 sec   (1518 perm/sec)   p_kst 9.217391e-05   p_cons 7.816365e-01   p_joint 6.582609e-04

Joint ci ratio: 1.439587e-01	ci left: 5.928033e-04	ci right 6.855815e-04	k: 740	n:1160000
Cons ci ratio: 1.923705e-03	ci left: 7.808884e-01	ci right 7.823929e-01	k: 906704	n:1160000
KS ci ratio: 3.771845e-01	ci left: 7.559463e-05	ci right 1.114632e-04	k: 107	n:1160000
SLC26A11   1160000 perm   768 sec   (1511 perm/sec)   p_kst 9.224138e-05   p_cons 7.816414e-01   p_joint 6.379310e-04

Joint ci ratio: 1.433794e-01	ci left: 5.926805e-04	ci right 6.850343e-04	k: 746	n:1170000
Cons ci ratio: 1.915147e-03	ci left: 7.809486e-01	ci right 7.824465e-01	k: 914587	n:1170000
KS ci ratio: 3.737396e-01	ci left: 7.649662e-05	ci right 1.123805e-04	k: 109	n:1170000
SLC26A11   1170000 perm   778 sec   (1503 perm/sec)   p_kst 9.316239e-05   p_cons 7.816983e-01   p_joint 6.376068e-04

Joint ci ratio: 1.430926e-01	ci left: 5.901090e-04	ci right 6.818624e-04	k: 749	n:1180000
Cons ci ratio: 1.906944e-03	ci left: 7.809646e-01	ci right 7.824561e-01	k: 922419	n:1180000
KS ci ratio: 3.737398e-01	ci left: 7.584834e-05	ci right 1.114281e-04	k: 109	n:1180000
SLC26A11   1180000 perm   789 sec   (1496 perm/sec)   p_kst 9.237288e-05   p_cons 7.817110e-01   p_joint 6.347458e-04

Joint ci ratio: 1.441547e-01	ci left: 5.762382e-04	ci right 6.665572e-04	k: 738	n:1190000
Cons ci ratio: 1.899154e-03	ci left: 7.809247e-01	ci right 7.824100e-01	k: 930185	n:1190000
KS ci ratio: 3.720524e-01	ci left: 7.597254e-05	ci right 1.114105e-04	k: 110	n:1190000
SLC26A11   1190000 perm   799 sec   (1488 perm/sec)   p_kst 9.243697e-05   p_cons 7.816681e-01   p_joint 6.201681e-04

Joint ci ratio: 1.467615e-01	ci left: 5.505575e-04	ci right 6.385486e-04	k: 712	n:1200000
Cons ci ratio: 1.891264e-03	ci left: 7.809206e-01	ci right 7.823997e-01	k: 937993	n:1200000
KS ci ratio: 3.720526e-01	ci left: 7.533944e-05	ci right 1.104821e-04	k: 110	n:1200000
SLC26A11   1200000 perm   810 sec   (1481 perm/sec)   p_kst 9.166667e-05   p_cons 7.816608e-01   p_joint 5.933333e-04

Joint ci ratio: 1.456420e-01	ci left: 5.547659e-04	ci right 6.426945e-04	k: 723	n:1210000
Cons ci ratio: 1.883403e-03	ci left: 7.809289e-01	ci right 7.824019e-01	k: 945816	n:1210000
KS ci ratio: 3.720527e-01	ci left: 7.471679e-05	ci right 1.095690e-04	k: 110	n:1210000
SLC26A11   1210000 perm   821 sec   (1474 perm/sec)   p_kst 9.090909e-05   p_cons 7.816661e-01   p_joint 5.975207e-04

Joint ci ratio: 1.451417e-01	ci left: 5.541679e-04	ci right 6.416739e-04	k: 728	n:1220000
Cons ci ratio: 1.875455e-03	ci left: 7.809708e-01	ci right 7.824377e-01	k: 953680	n:1220000
KS ci ratio: 3.687454e-01	ci left: 7.559112e-05	ci right 1.104622e-04	k: 112	n:1220000
SLC26A11   1220000 perm   831 sec   (1467 perm/sec)   p_kst 9.180328e-05   p_cons 7.817049e-01   p_joint 5.967213e-04

Joint ci ratio: 1.446466e-01	ci left: 5.535801e-04	ci right 6.406693e-04	k: 733	n:1230000
Cons ci ratio: 1.868048e-03	ci left: 7.809315e-01	ci right 7.823924e-01	k: 961445	n:1230000
KS ci ratio: 3.671245e-01	ci left: 7.571440e-05	ci right 1.104520e-04	k: 113	n:1230000
SLC26A11   1230000 perm   842 sec   (1460 perm/sec)   p_kst 9.186992e-05   p_cons 7.816626e-01   p_joint 5.959350e-04

Joint ci ratio: 1.441565e-01	ci left: 5.530023e-04	ci right 6.396805e-04	k: 738	n:1240000
Cons ci ratio: 1.860547e-03	ci left: 7.809258e-01	ci right 7.823809e-01	k: 969251	n:1240000
KS ci ratio: 3.639457e-01	ci left: 7.656857e-05	ci right 1.113216e-04	k: 115	n:1240000
SLC26A11   1240000 perm   853 sec   (1453 perm/sec)   p_kst 9.274194e-05   p_cons 7.816540e-01   p_joint 5.951613e-04

Joint ci ratio: 1.438650e-01	ci left: 5.508918e-04	ci right 6.370495e-04	k: 741	n:1250000
Cons ci ratio: 1.852983e-03	ci left: 7.809483e-01	ci right 7.823975e-01	k: 977092	n:1250000
KS ci ratio: 3.608481e-01	ci left: 7.741035e-05	ci right 1.121761e-04	k: 117	n:1250000
SLC26A11   1250000 perm   864 sec   (1446 perm/sec)   p_kst 9.360000e-05   p_cons 7.816736e-01   p_joint 5.928000e-04

Joint ci ratio: 1.433827e-01	ci left: 5.503453e-04	ci right 6.361043e-04	k: 746	n:1260000
Cons ci ratio: 1.845331e-03	ci left: 7.810039e-01	ci right 7.824472e-01	k: 984975	n:1260000
KS ci ratio: 3.593287e-01	ci left: 7.751783e-05	ci right 1.121510e-04	k: 118	n:1260000
SLC26A11   1260000 perm   875 sec   (1440 perm/sec)   p_kst 9.365079e-05   p_cons 7.817262e-01   p_joint 5.920635e-04

Joint ci ratio: 1.426209e-01	ci left: 5.520857e-04	ci right 6.376200e-04	k: 754	n:1270000
Cons ci ratio: 1.838333e-03	ci left: 7.809545e-01	ci right 7.823922e-01	k: 992726	n:1270000
KS ci ratio: 3.578284e-01	ci left: 7.762393e-05	ci right 1.121259e-04	k: 119	n:1270000
SLC26A11   1270000 perm   886 sec   (1433 perm/sec)   p_kst 9.370079e-05   p_cons 7.816740e-01   p_joint 5.937008e-04

Joint ci ratio: 1.448459e-01	ci left: 5.304495e-04	ci right 6.140247e-04	k: 731	n:1280000
Cons ci ratio: 1.830705e-03	ci left: 7.810381e-01	ci right 7.824700e-01	k: 1000646	n:1280000
KS ci ratio: 3.548831e-01	ci left: 7.844013e-05	ci right 1.129517e-04	k: 121	n:1280000
SLC26A11   1280000 perm   898 sec   (1426 perm/sec)   p_kst 9.453125e-05   p_cons 7.817547e-01   p_joint 5.710937e-04

Joint ci ratio: 1.460489e-01	ci left: 5.173734e-04	ci right 5.996245e-04	k: 719	n:1290000
Cons ci ratio: 1.823726e-03	ci left: 7.810164e-01	ci right 7.824428e-01	k: 1008432	n:1290000
KS ci ratio: 3.534375e-01	ci left: 7.853829e-05	ci right 1.129200e-04	k: 122	n:1290000
SLC26A11   1290000 perm   909 sec   (1419 perm/sec)   p_kst 9.457364e-05   p_cons 7.817302e-01   p_joint 5.573643e-04

Joint ci ratio: 1.465593e-01	ci left: 5.096881e-04	ci right 5.910254e-04	k: 714	n:1300000
Cons ci ratio: 1.816601e-03	ci left: 7.810374e-01	ci right 7.824583e-01	k: 1016273	n:1300000
KS ci ratio: 3.534376e-01	ci left: 7.793415e-05	ci right 1.120514e-04	k: 122	n:1300000
SLC26A11   1300000 perm   920 sec   (1413 perm/sec)   p_kst 9.384615e-05   p_cons 7.817485e-01   p_joint 5.492308e-04

Joint ci ratio: 1.461512e-01	ci left: 5.087390e-04	ci right 5.896789e-04	k: 718	n:1310000
Cons ci ratio: 1.809778e-03	ci left: 7.810168e-01	ci right 7.824323e-01	k: 1024060	n:1310000
KS ci ratio: 3.520096e-01	ci left: 7.803496e-05	ci right 1.120268e-04	k: 123	n:1310000
SLC26A11   1310000 perm   931 sec   (1406 perm/sec)   p_kst 9.389313e-05   p_cons 7.817252e-01   p_joint 5.480916e-04

Joint ci ratio: 1.457464e-01	ci left: 5.078045e-04	ci right 5.883526e-04	k: 722	n:1320000
Cons ci ratio: 1.802854e-03	ci left: 7.810299e-01	ci right 7.824400e-01	k: 1031891	n:1320000
KS ci ratio: 3.520097e-01	ci left: 7.744378e-05	ci right 1.111781e-04	k: 123	n:1320000
SLC26A11   1320000 perm   943 sec   (1400 perm/sec)   p_kst 9.318182e-05   p_cons 7.817356e-01   p_joint 5.469697e-04

Joint ci ratio: 1.478065e-01	ci left: 4.895007e-04	ci right 5.683399e-04	k: 702	n:1330000
Cons ci ratio: 1.796239e-03	ci left: 7.809992e-01	ci right 7.824041e-01	k: 1039664	n:1330000
KS ci ratio: 3.505989e-01	ci left: 7.754703e-05	ci right 1.111601e-04	k: 124	n:1330000
SLC26A11   1330000 perm   955 sec   (1393 perm/sec)   p_kst 9.323308e-05   p_cons 7.817023e-01   p_joint 5.278195e-04

Joint ci ratio: 1.495189e-01	ci left: 4.743513e-04	ci right 5.517148e-04	k: 686	n:1340000
Cons ci ratio: 1.789662e-03	ci left: 7.809757e-01	ci right 7.823753e-01	k: 1047446	n:1340000
KS ci ratio: 3.492048e-01	ci left: 7.764901e-05	ci right 1.111422e-04	k: 125	n:1340000
SLC26A11   1340000 perm   967 sec   (1386 perm/sec)   p_kst 9.328358e-05   p_cons 7.816761e-01   p_joint 5.119403e-04

Joint ci ratio: 1.576494e-01	ci left: 4.216884e-04	ci right 4.945567e-04	k: 617	n:1350000
Cons ci ratio: 1.783113e-03	ci left: 7.809607e-01	ci right 7.823552e-01	k: 1055239	n:1350000
KS ci ratio: 3.492049e-01	ci left: 7.707383e-05	ci right 1.103189e-04	k: 125	n:1350000
SLC26A11   1350000 perm   978 sec   (1380 perm/sec)   p_kst 9.259259e-05   p_cons 7.816585e-01   p_joint 4.570370e-04

Joint ci ratio: 1.571417e-01	ci left: 4.214131e-04	ci right 4.939772e-04	k: 621	n:1360000
Cons ci ratio: 1.776678e-03	ci left: 7.809378e-01	ci right 7.823272e-01	k: 1063021	n:1360000
KS ci ratio: 3.478274e-01	ci left: 7.717804e-05	ci right 1.103072e-04	k: 126	n:1360000
SLC26A11   1360000 perm   990 sec   (1374 perm/sec)   p_kst 9.264706e-05   p_cons 7.816331e-01   p_joint 4.566176e-04

Joint ci ratio: 1.566389e-01	ci left: 4.211421e-04	ci right 4.934058e-04	k: 625	n:1370000
Cons ci ratio: 1.770205e-03	ci left: 7.809357e-01	ci right 7.823200e-01	k: 1070831	n:1370000
KS ci ratio: 3.464660e-01	ci left: 7.728099e-05	ci right 1.102953e-04	k: 127	n:1370000
SLC26A11   1370000 perm   1002 sec   (1367 perm/sec)   p_kst 9.270073e-05   p_cons 7.816285e-01   p_joint 4.562044e-04

Joint ci ratio: 1.555246e-01	ci left: 4.243575e-04	ci right 4.966065e-04	k: 634	n:1380000
Cons ci ratio: 1.763818e-03	ci left: 7.809308e-01	ci right 7.823101e-01	k: 1078637	n:1380000
KS ci ratio: 3.451205e-01	ci left: 7.738269e-05	ci right 1.102834e-04	k: 128	n:1380000
SLC26A11   1380000 perm   1014 sec   (1361 perm/sec)   p_kst 9.275362e-05   p_cons 7.816210e-01   p_joint 4.594203e-04

Joint ci ratio: 1.366852e-01	ci left: 5.509417e-04	ci right 6.324575e-04	k: 821	n:1390000
Cons ci ratio: 1.757341e-03	ci left: 7.809569e-01	ci right 7.823312e-01	k: 1086486	n:1390000
KS ci ratio: 3.424757e-01	ci left: 7.814062e-05	ci right 1.110526e-04	k: 130	n:1390000
SLC26A11   1390000 perm   1026 sec   (1355 perm/sec)   p_kst 9.352518e-05   p_cons 7.816446e-01   p_joint 5.906475e-04

Joint ci ratio: 1.361069e-01	ci left: 5.518358e-04	ci right 6.331104e-04	k: 828	n:1400000
Cons ci ratio: 1.751172e-03	ci left: 7.809361e-01	ci right 7.823056e-01	k: 1094270	n:1400000
KS ci ratio: 3.398908e-01	ci left: 7.888866e-05	ci right 1.118098e-04	k: 132	n:1400000
SLC26A11   1400000 perm   1038 sec   (1349 perm/sec)   p_kst 9.428571e-05   p_cons 7.816214e-01   p_joint 5.914286e-04

Joint ci ratio: 1.356983e-01	ci left: 5.513476e-04	ci right 6.322869e-04	k: 833	n:1410000
Cons ci ratio: 1.745217e-03	ci left: 7.808866e-01	ci right 7.822513e-01	k: 1102013	n:1410000
KS ci ratio: 3.398910e-01	ci left: 7.832916e-05	ci right 1.110169e-04	k: 132	n:1410000
SLC26A11   1410000 perm   1050 sec   (1343 perm/sec)   p_kst 9.361702e-05   p_cons 7.815695e-01   p_joint 5.907801e-04

Joint ci ratio: 1.350520e-01	ci left: 5.529079e-04	ci right 6.336586e-04	k: 841	n:1420000
Cons ci ratio: 1.738880e-03	ci left: 7.809245e-01	ci right 7.822843e-01	k: 1109879	n:1420000
KS ci ratio: 3.373637e-01	ci left: 7.906625e-05	ci right 1.117628e-04	k: 134	n:1420000
SLC26A11   1420000 perm   1062 sec   (1337 perm/sec)   p_kst 9.436620e-05   p_cons 7.816049e-01   p_joint 5.922535e-04

Joint ci ratio: 1.348122e-01	ci left: 5.510685e-04	ci right 6.313962e-04	k: 844	n:1430000
Cons ci ratio: 1.732808e-03	ci left: 7.809233e-01	ci right 7.822783e-01	k: 1117690	n:1430000
KS ci ratio: 3.373638e-01	ci left: 7.851333e-05	ci right 1.109813e-04	k: 134	n:1430000
SLC26A11   1430000 perm   1075 sec   (1331 perm/sec)   p_kst 9.370629e-05   p_cons 7.816014e-01   p_joint 5.902098e-04

Joint ci ratio: 1.352133e-01	ci left: 5.438865e-04	ci right 6.234222e-04	k: 839	n:1440000
Cons ci ratio: 1.726735e-03	ci left: 7.809347e-01	ci right 7.822850e-01	k: 1125519	n:1440000
KS ci ratio: 3.348922e-01	ci left: 7.923979e-05	ci right 1.117162e-04	k: 136	n:1440000
SLC26A11   1440000 perm   1087 sec   (1325 perm/sec)   p_kst 9.444444e-05   p_cons 7.816104e-01   p_joint 5.826389e-04

Joint ci ratio: 1.347330e-01	ci left: 5.441338e-04	ci right 6.234003e-04	k: 845	n:1450000
Cons ci ratio: 1.720621e-03	ci left: 7.809667e-01	ci right 7.823122e-01	k: 1133378	n:1450000
KS ci ratio: 3.324740e-01	ci left: 7.995707e-05	ci right 1.124402e-04	k: 138	n:1450000
SLC26A11   1450000 perm   1099 sec   (1319 perm/sec)   p_kst 9.517241e-05   p_cons 7.816400e-01   p_joint 5.827586e-04

Joint ci ratio: 1.344949e-01	ci left: 5.423924e-04	ci right 6.212544e-04	k: 848	n:1460000
Cons ci ratio: 1.714720e-03	ci left: 7.809687e-01	ci right 7.823096e-01	k: 1141194	n:1460000
KS ci ratio: 3.324741e-01	ci left: 7.940942e-05	ci right 1.116701e-04	k: 138	n:1460000
SLC26A11   1460000 perm   1112 sec   (1313 perm/sec)   p_kst 9.452055e-05   p_cons 7.816397e-01   p_joint 5.808219e-04

Joint ci ratio: 1.430062e-01	ci left: 4.743468e-04	ci right 5.480525e-04	k: 750	n:1470000
Cons ci ratio: 1.659962e-03	ci left: 7.907334e-01	ci right 7.920477e-01	k: 1163345	n:1470000
KS ci ratio: 3.324742e-01	ci left: 7.886921e-05	ci right 1.109104e-04	k: 138	n:1470000
SLC26A11   1470000 perm   1125 sec   (1307 perm/sec)   p_kst 9.387755e-05   p_cons 7.913912e-01   p_joint 5.102041e-04

Joint ci ratio: 1.424383e-01	ci left: 4.750510e-04	ci right 5.485481e-04	k: 756	n:1480000
Cons ci ratio: 1.654450e-03	ci left: 7.907147e-01	ci right 7.920247e-01	k: 1171228	n:1480000
KS ci ratio: 3.312847e-01	ci left: 7.895569e-05	ci right 1.108928e-04	k: 139	n:1480000
SLC26A11   1480000 perm   1137 sec   (1301 perm/sec)   p_kst 9.391892e-05   p_cons 7.913703e-01   p_joint 5.108108e-04

Joint ci ratio: 1.419703e-01	ci left: 4.750991e-04	ci right 5.483416e-04	k: 761	n:1490000
Cons ci ratio: 1.648753e-03	ci left: 7.907440e-01	ci right 7.920495e-01	k: 1179182	n:1490000
KS ci ratio: 3.301078e-01	ci left: 7.904121e-05	ci right 1.108752e-04	k: 140	n:1490000
SLC26A11   1490000 perm   1150 sec   (1296 perm/sec)   p_kst 9.395973e-05   p_cons 7.913973e-01   p_joint 5.107383e-04

Joint ci ratio: 1.411390e-01	ci left: 4.777193e-04	ci right 5.508983e-04	k: 770	n:1500000
Cons ci ratio: 1.643378e-03	ci left: 7.907202e-01	ci right 7.920214e-01	k: 1187057	n:1500000
KS ci ratio: 3.266509e-01	ci left: 8.034943e-05	ci right 1.123003e-04	k: 143	n:1500000
SLC26A11   1500000 perm   1163 sec   (1290 perm/sec)   p_kst 9.533333e-05   p_cons 7.913713e-01   p_joint 5.133333e-04

Joint ci ratio: 1.408653e-01	ci left: 4.764723e-04	ci right 5.493068e-04	k: 773	n:1510000
Cons ci ratio: 1.637844e-03	ci left: 7.907391e-01	ci right 7.920359e-01	k: 1194996	n:1510000
KS ci ratio: 3.255225e-01	ci left: 8.042536e-05	ci right 1.122729e-04	k: 144	n:1510000
SLC26A11   1510000 perm   1176 sec   (1284 perm/sec)   p_kst 9.536424e-05   p_cons 7.913881e-01   p_joint 5.119205e-04

Joint ci ratio: 1.402325e-01	ci left: 4.777809e-04	ci right 5.504600e-04	k: 780	n:1520000
Cons ci ratio: 1.632486e-03	ci left: 7.907334e-01	ci right 7.920260e-01	k: 1202898	n:1520000
KS ci ratio: 3.233004e-01	ci left: 8.110490e-05	ci right 1.129568e-04	k: 146	n:1520000
SLC26A11   1520000 perm   1189 sec   (1278 perm/sec)   p_kst 9.605263e-05   p_cons 7.913803e-01   p_joint 5.131579e-04

Joint ci ratio: 1.396969e-01	ci left: 4.784424e-04	ci right 5.509210e-04	k: 786	n:1530000
Cons ci ratio: 1.627296e-03	ci left: 7.907043e-01	ci right 7.919927e-01	k: 1210764	n:1530000
KS ci ratio: 3.233005e-01	ci left: 8.057480e-05	ci right 1.122186e-04	k: 146	n:1530000
SLC26A11   1530000 perm   1202 sec   (1273 perm/sec)   p_kst 9.542484e-05   p_cons 7.913490e-01   p_joint 5.137255e-04

Joint ci ratio: 1.404130e-01	ci left: 4.703227e-04	ci right 5.419671e-04	k: 778	n:1540000
Cons ci ratio: 1.621674e-03	ci left: 7.907737e-01	ci right 7.920577e-01	k: 1218781	n:1540000
KS ci ratio: 3.233006e-01	ci left: 8.005158e-05	ci right 1.114899e-04	k: 146	n:1540000
SLC26A11   1540000 perm   1216 sec   (1267 perm/sec)   p_kst 9.480519e-05   p_cons 7.914162e-01   p_joint 5.051948e-04

Joint ci ratio: 1.411402e-01	ci left: 4.623088e-04	ci right 5.331277e-04	k: 770	n:1550000
Cons ci ratio: 1.616517e-03	ci left: 7.907588e-01	ci right 7.920388e-01	k: 1226669	n:1550000
KS ci ratio: 3.211234e-01	ci left: 8.072110e-05	ci right 1.121649e-04	k: 148	n:1550000
SLC26A11   1550000 perm   1229 sec   (1261 perm/sec)   p_kst 9.548387e-05   p_cons 7.913994e-01   p_joint 4.967742e-04

Joint ci ratio: 1.408665e-01	ci left: 4.612005e-04	ci right 5.317011e-04	k: 773	n:1560000
Cons ci ratio: 1.611434e-03	ci left: 7.907391e-01	ci right 7.920150e-01	k: 1234549	n:1560000
KS ci ratio: 3.200512e-01	ci left: 8.079310e-05	ci right 1.121383e-04	k: 149	n:1560000
SLC26A11   1560000 perm   1243 sec   (1255 perm/sec)   p_kst 9.551282e-05   p_cons 7.913776e-01   p_joint 4.955128e-04

Joint ci ratio: 1.405039e-01	ci left: 4.607210e-04	ci right 5.309519e-04	k: 777	n:1570000
Cons ci ratio: 1.606541e-03	ci left: 7.906903e-01	ci right 7.919622e-01	k: 1242383	n:1570000
KS ci ratio: 3.200513e-01	ci left: 8.027849e-05	ci right 1.114241e-04	k: 149	n:1570000
SLC26A11   1570000 perm   1256 sec   (1250 perm/sec)   p_kst 9.490446e-05   p_cons 7.913268e-01   p_joint 4.949045e-04

Joint ci ratio: 1.398760e-01	ci left: 4.620800e-04	ci right 5.321771e-04	k: 784	n:1580000
Cons ci ratio: 1.601265e-03	ci left: 7.907301e-01	ci right 7.919979e-01	k: 1250356	n:1580000
KS ci ratio: 3.189897e-01	ci left: 8.035256e-05	ci right 1.114024e-04	k: 150	n:1580000
SLC26A11   1580000 perm   1270 sec   (1245 perm/sec)   p_kst 9.493671e-05   p_cons 7.913646e-01   p_joint 4.962025e-04

Joint ci ratio: 1.396096e-01	ci left: 4.609947e-04	ci right 5.307828e-04	k: 787	n:1590000
Cons ci ratio: 1.595914e-03	ci left: 7.907959e-01	ci right 7.920596e-01	k: 1258371	n:1590000
KS ci ratio: 3.179387e-01	ci left: 8.042586e-05	ci right 1.113807e-04	k: 151	n:1590000
SLC26A11   1590000 perm   1283 sec   (1239 perm/sec)   p_kst 9.496855e-05   p_cons 7.914283e-01   p_joint 4.949686e-04

Joint ci ratio: 1.391687e-01	ci left: 4.611295e-04	ci right 5.306993e-04	k: 792	n:1600000
Cons ci ratio: 1.590947e-03	ci left: 7.907921e-01	ci right 7.920518e-01	k: 1266276	n:1600000
KS ci ratio: 3.168980e-01	ci left: 8.049842e-05	ci right 1.113592e-04	k: 152	n:1600000
SLC26A11   1600000 perm   1297 sec   (1234 perm/sec)   p_kst 9.500000e-05   p_cons 7.914225e-01   p_joint 4.950000e-04

Joint ci ratio: 1.387321e-01	ci left: 4.612630e-04	ci right 5.306165e-04	k: 797	n:1610000
Cons ci ratio: 1.585960e-03	ci left: 7.908020e-01	ci right 7.920578e-01	k: 1274203	n:1610000
KS ci ratio: 3.168981e-01	ci left: 7.999842e-05	ci right 1.106676e-04	k: 152	n:1610000
SLC26A11   1610000 perm   1310 sec   (1229 perm/sec)   p_kst 9.440994e-05   p_cons 7.914304e-01   p_joint 4.950311e-04

Joint ci ratio: 1.385587e-01	ci left: 4.596074e-04	ci right 5.286185e-04	k: 799	n:1620000
Cons ci ratio: 1.580973e-03	ci left: 7.908217e-01	ci right 7.920736e-01	k: 1282146	n:1620000
KS ci ratio: 3.158675e-01	ci left: 8.007288e-05	ci right 1.106506e-04	k: 153	n:1620000
SLC26A11   1620000 perm   1324 sec   (1223 perm/sec)   p_kst 9.444444e-05   p_cons 7.914481e-01   p_joint 4.932099e-04

Joint ci ratio: 1.382136e-01	ci left: 4.591567e-04	ci right 5.279144e-04	k: 803	n:1630000
Cons ci ratio: 1.576144e-03	ci left: 7.908178e-01	ci right 7.920658e-01	k: 1290051	n:1630000
KS ci ratio: 3.158676e-01	ci left: 7.958163e-05	ci right 1.099717e-04	k: 153	n:1630000
SLC26A11   1630000 perm   1338 sec   (1218 perm/sec)   p_kst 9.386503e-05   p_cons 7.914423e-01   p_joint 4.926380e-04

Joint ci ratio: 1.401454e-01	ci left: 4.434092e-04	ci right 5.108143e-04	k: 781	n:1640000
Cons ci ratio: 1.571222e-03	ci left: 7.908427e-01	ci right 7.920868e-01	k: 1298003	n:1640000
KS ci ratio: 3.158677e-01	ci left: 7.909638e-05	ci right 1.093012e-04	k: 153	n:1640000
SLC26A11   1640000 perm   1352 sec   (1213 perm/sec)   p_kst 9.329268e-05   p_cons 7.914652e-01   p_joint 4.762195e-04

Joint ci ratio: 1.399667e-01	ci left: 4.418915e-04	ci right 5.089730e-04	k: 783	n:1650000
Cons ci ratio: 1.566455e-03	ci left: 7.908441e-01	ci right 7.920845e-01	k: 1305917	n:1650000
KS ci ratio: 3.158678e-01	ci left: 7.861700e-05	ci right 1.086388e-04	k: 153	n:1650000
SLC26A11   1650000 perm   1366 sec   (1208 perm/sec)   p_kst 9.272727e-05   p_cons 7.914648e-01   p_joint 4.745455e-04

Joint ci ratio: 1.391700e-01	ci left: 4.444619e-04	ci right 5.115177e-04	k: 792	n:1660000
Cons ci ratio: 1.561806e-03	ci left: 7.908300e-01	ci right 7.920666e-01	k: 1313805	n:1660000
KS ci ratio: 3.138363e-01	ci left: 7.925304e-05	ci right 1.092840e-04	k: 155	n:1660000
SLC26A11   1660000 perm   1380 sec   (1203 perm/sec)   p_kst 9.337349e-05   p_cons 7.914488e-01   p_joint 4.771084e-04

Joint ci ratio: 1.389076e-01	ci left: 4.435343e-04	ci right 5.103136e-04	k: 795	n:1670000
Cons ci ratio: 1.557217e-03	ci left: 7.908117e-01	ci right 7.920447e-01	k: 1321686	n:1670000
KS ci ratio: 3.138364e-01	ci left: 7.877846e-05	ci right 1.086296e-04	k: 155	n:1670000
SLC26A11   1670000 perm   1394 sec   (1198 perm/sec)   p_kst 9.281437e-05   p_cons 7.914287e-01   p_joint 4.760479e-04

Joint ci ratio: 1.385599e-01	ci left: 4.431926e-04	ci right 5.097396e-04	k: 799	n:1680000
Cons ci ratio: 1.552613e-03	ci left: 7.908057e-01	ci right 7.920350e-01	k: 1329587	n:1680000
KS ci ratio: 3.128353e-01	ci left: 7.885798e-05	ci right 1.086249e-04	k: 156	n:1680000
SLC26A11   1680000 perm   1408 sec   (1193 perm/sec)   p_kst 9.285714e-05   p_cons 7.914208e-01   p_joint 4.755952e-04

Joint ci ratio: 1.381289e-01	ci left: 4.434263e-04	ci right 5.097843e-04	k: 804	n:1690000
Cons ci ratio: 1.548110e-03	ci left: 7.907866e-01	ci right 7.920124e-01	k: 1337466	n:1690000
KS ci ratio: 3.128354e-01	ci left: 7.839136e-05	ci right 1.079822e-04	k: 156	n:1690000
SLC26A11   1690000 perm   1423 sec   (1188 perm/sec)   p_kst 9.230769e-05   p_cons 7.914000e-01   p_joint 4.757396e-04

Joint ci ratio: 1.380433e-01	ci left: 4.413858e-04	ci right 5.073941e-04	k: 805	n:1700000
Cons ci ratio: 1.543622e-03	ci left: 7.907731e-01	ci right 7.919953e-01	k: 1345354	n:1700000
KS ci ratio: 3.128355e-01	ci left: 7.793024e-05	ci right 1.073470e-04	k: 156	n:1700000
SLC26A11   1700000 perm   1437 sec   (1183 perm/sec)   p_kst 9.176471e-05   p_cons 7.913847e-01   p_joint 4.735294e-04

Joint ci ratio: 1.374477e-01	ci left: 4.427571e-04	ci right 5.086615e-04	k: 812	n:1710000
Cons ci ratio: 1.539172e-03	ci left: 7.907598e-01	ci right 7.919784e-01	k: 1353242	n:1710000
KS ci ratio: 3.098886e-01	ci left: 7.909184e-05	ci right 1.086102e-04	k: 159	n:1710000
SLC26A11   1710000 perm   1451 sec   (1178 perm/sec)   p_kst 9.298246e-05   p_cons 7.913696e-01   p_joint 4.748538e-04

Joint ci ratio: 1.371108e-01	ci left: 4.424286e-04	ci right 5.081095e-04	k: 816	n:1720000
Cons ci ratio: 1.534523e-03	ci left: 7.907978e-01	ci right 7.920128e-01	k: 1361218	n:1720000
KS ci ratio: 3.079697e-01	ci left: 7.970466e-05	ci right 1.092314e-04	k: 161	n:1720000
SLC26A11   1720000 perm   1466 sec   (1173 perm/sec)   p_kst 9.360465e-05   p_cons 7.914058e-01   p_joint 4.744186e-04

Joint ci ratio: 1.369434e-01	ci left: 4.409877e-04	ci right 5.063682e-04	k: 818	n:1730000
Cons ci ratio: 1.530130e-03	ci left: 7.907891e-01	ci right 7.920006e-01	k: 1369114	n:1730000
KS ci ratio: 3.079698e-01	ci left: 7.924394e-05	ci right 1.086000e-04	k: 161	n:1730000
SLC26A11   1730000 perm   1480 sec   (1169 perm/sec)   p_kst 9.306358e-05   p_cons 7.913954e-01   p_joint 4.728324e-04

Joint ci ratio: 1.342641e-01	ci left: 4.567757e-04	ci right 5.230662e-04	k: 851	n:1740000
Cons ci ratio: 1.525591e-03	ci left: 7.908203e-01	ci right 7.920282e-01	k: 1377079	n:1740000
KS ci ratio: 3.070236e-01	ci left: 7.931889e-05	ci right 1.085948e-04	k: 162	n:1740000
SLC26A11   1740000 perm   1494 sec   (1164 perm/sec)   p_kst 9.310345e-05   p_cons 7.914247e-01   p_joint 4.890805e-04

Joint ci ratio: 1.337937e-01	ci left: 4.574792e-04	ci right 5.236207e-04	k: 857	n:1750000
Cons ci ratio: 1.521195e-03	ci left: 7.908287e-01	ci right 7.920332e-01	k: 1385005	n:1750000
KS ci ratio: 3.060861e-01	ci left: 7.939312e-05	ci right 1.085895e-04	k: 163	n:1750000
SLC26A11   1750000 perm   1509 sec   (1160 perm/sec)   p_kst 9.314286e-05   p_cons 7.914314e-01   p_joint 4.897143e-04

Joint ci ratio: 1.405077e-01	ci left: 4.109833e-04	ci right 4.736341e-04	k: 777	n:1760000
Cons ci ratio: 1.516889e-03	ci left: 7.908257e-01	ci right 7.920268e-01	k: 1392911	n:1760000
KS ci ratio: 3.060862e-01	ci left: 7.894202e-05	ci right 1.079725e-04	k: 163	n:1760000
SLC26A11   1760000 perm   1523 sec   (1155 perm/sec)   p_kst 9.261364e-05   p_cons 7.914267e-01   p_joint 4.414773e-04

Joint ci ratio: 1.398797e-01	ci left: 4.124775e-04	ci right 4.750516e-04	k: 784	n:1770000
Cons ci ratio: 1.512562e-03	ci left: 7.908352e-01	ci right 7.920328e-01	k: 1400839	n:1770000
KS ci ratio: 3.042367e-01	ci left: 7.953946e-05	ci right 1.085787e-04	k: 165	n:1770000
SLC26A11   1770000 perm   1538 sec   (1151 perm/sec)   p_kst 9.322034e-05   p_cons 7.914345e-01   p_joint 4.429379e-04

Joint ci ratio: 1.397020e-01	ci left: 4.112445e-04	ci right 4.735457e-04	k: 786	n:1780000
Cons ci ratio: 1.508234e-03	ci left: 7.908530e-01	ci right 7.920472e-01	k: 1408782	n:1780000
KS ci ratio: 3.042367e-01	ci left: 7.909260e-05	ci right 1.079687e-04	k: 165	n:1780000
SLC26A11   1780000 perm   1553 sec   (1146 perm/sec)   p_kst 9.269663e-05   p_cons 7.914506e-01   p_joint 4.415730e-04

Joint ci ratio: 1.391724e-01	ci left: 4.121820e-04	ci right 4.743690e-04	k: 792	n:1790000
Cons ci ratio: 1.503790e-03	ci left: 7.909041e-01	ci right 7.920949e-01	k: 1416785	n:1790000
KS ci ratio: 3.024203e-01	ci left: 7.968304e-05	ci right 1.085676e-04	k: 167	n:1790000
SLC26A11   1790000 perm   1567 sec   (1142 perm/sec)   p_kst 9.329609e-05   p_cons 7.915000e-01   p_joint 4.424581e-04

Joint ci ratio: 1.392604e-01	ci left: 4.093559e-04	ci right 4.711588e-04	k: 791	n:1800000
Cons ci ratio: 1.499430e-03	ci left: 7.909447e-01	ci right 7.921321e-01	k: 1424770	n:1800000
KS ci ratio: 3.015242e-01	ci left: 7.975383e-05	ci right 1.085620e-04	k: 168	n:1800000
SLC26A11   1800000 perm   1582 sec   (1138 perm/sec)   p_kst 9.333333e-05   p_cons 7.915389e-01   p_joint 4.394444e-04

Joint ci ratio: 1.400590e-01	ci left: 4.022955e-04	ci right 4.634098e-04	k: 782	n:1810000
Cons ci ratio: 1.495384e-03	ci left: 7.909240e-01	ci right 7.921082e-01	k: 1432645	n:1810000
KS ci ratio: 2.988829e-01	ci left: 8.084585e-05	ci right 1.097441e-04	k: 171	n:1810000
SLC26A11   1810000 perm   1597 sec   (1133 perm/sec)   p_kst 9.447514e-05   p_cons 7.915166e-01   p_joint 4.320442e-04

Joint ci ratio: 1.394370e-01	ci left: 4.037968e-04	ci right 4.648441e-04	k: 789	n:1820000
Cons ci ratio: 1.491486e-03	ci left: 7.908777e-01	ci right 7.920587e-01	k: 1440473	n:1820000
KS ci ratio: 2.963098e-01	ci left: 8.192696e-05	ci right 1.109122e-04	k: 174	n:1820000
SLC26A11   1820000 perm   1612 sec   (1129 perm/sec)   p_kst 9.560440e-05   p_cons 7.914687e-01   p_joint 4.335165e-04

Joint ci ratio: 1.391731e-01	ci left: 4.031725e-04	ci right 4.640004e-04	k: 792	n:1830000
Cons ci ratio: 1.487471e-03	ci left: 7.908647e-01	ci right 7.920425e-01	k: 1448361	n:1830000
KS ci ratio: 2.963099e-01	ci left: 8.147926e-05	ci right 1.103061e-04	k: 174	n:1830000
SLC26A11   1830000 perm   1628 sec   (1124 perm/sec)   p_kst 9.508197e-05   p_cons 7.914541e-01   p_joint 4.327869e-04

Joint ci ratio: 1.386495e-01	ci left: 4.041289e-04	ci right 4.648528e-04	k: 798	n:1840000
Cons ci ratio: 1.483415e-03	ci left: 7.908682e-01	ci right 7.920428e-01	k: 1456279	n:1840000
KS ci ratio: 2.946310e-01	ci left: 8.204285e-05	ci right 1.108739e-04	k: 176	n:1840000
SLC26A11   1840000 perm   1643 sec   (1120 perm/sec)   p_kst 9.565217e-05   p_cons 7.914560e-01   p_joint 4.336957e-04

Joint ci ratio: 1.383900e-01	ci left: 4.035098e-04	ci right 4.640179e-04	k: 801	n:1850000
Cons ci ratio: 1.479472e-03	ci left: 7.908538e-01	ci right 7.920253e-01	k: 1464164	n:1850000
KS ci ratio: 2.946311e-01	ci left: 8.159937e-05	ci right 1.102746e-04	k: 176	n:1850000
SLC26A11   1850000 perm   1658 sec   (1116 perm/sec)   p_kst 9.513514e-05   p_cons 7.914400e-01   p_joint 4.329730e-04

Joint ci ratio: 1.378751e-01	ci left: 4.044547e-04	ci right 4.648604e-04	k: 807	n:1860000
Cons ci ratio: 1.475488e-03	ci left: 7.908557e-01	ci right 7.920240e-01	k: 1472079	n:1860000
KS ci ratio: 2.946311e-01	ci left: 8.116066e-05	ci right 1.096817e-04	k: 176	n:1860000
SLC26A11   1860000 perm   1673 sec   (1112 perm/sec)   p_kst 9.462366e-05   p_cons 7.914403e-01   p_joint 4.338710e-04

Joint ci ratio: 1.376199e-01	ci left: 4.038409e-04	ci right 4.640340e-04	k: 810	n:1870000
Cons ci ratio: 1.471479e-03	ci left: 7.908705e-01	ci right 7.920356e-01	k: 1480018	n:1870000
KS ci ratio: 2.946312e-01	ci left: 8.072664e-05	ci right 1.090952e-04	k: 176	n:1870000
SLC26A11   1870000 perm   1689 sec   (1107 perm/sec)   p_kst 9.411765e-05   p_cons 7.914535e-01   p_joint 4.331551e-04

Joint ci ratio: 1.371976e-01	ci left: 4.042609e-04	ci right 4.643167e-04	k: 815	n:1880000
Cons ci ratio: 1.467526e-03	ci left: 7.908797e-01	ci right 7.920417e-01	k: 1487947	n:1880000
KS ci ratio: 2.921655e-01	ci left: 8.177557e-05	ci right 1.102277e-04	k: 179	n:1880000
SLC26A11   1880000 perm   1704 sec   (1103 perm/sec)   p_kst 9.521277e-05   p_cons 7.914612e-01   p_joint 4.335106e-04

Joint ci ratio: 1.368626e-01	ci left: 4.041658e-04	ci right 4.640489e-04	k: 819	n:1890000
Cons ci ratio: 1.463567e-03	ci left: 7.908974e-01	ci right 7.920562e-01	k: 1495892	n:1890000
KS ci ratio: 2.913573e-01	ci left: 8.183328e-05	ci right 1.102122e-04	k: 180	n:1890000
SLC26A11   1890000 perm   1719 sec   (1099 perm/sec)   p_kst 9.523810e-05   p_cons 7.914772e-01   p_joint 4.333333e-04

Joint ci ratio: 1.365300e-01	ci left: 4.040719e-04	ci right 4.637838e-04	k: 823	n:1900000
Cons ci ratio: 1.459575e-03	ci left: 7.909296e-01	ci right 7.920853e-01	k: 1503865	n:1900000
KS ci ratio: 2.913573e-01	ci left: 8.140257e-05	ci right 1.096321e-04	k: 180	n:1900000
SLC26A11   1900000 perm   1735 sec   (1095 perm/sec)   p_kst 9.473684e-05   p_cons 7.915079e-01   p_joint 4.331579e-04

Joint ci ratio: 1.374511e-01	ci left: 3.963945e-04	ci right 4.553993e-04	k: 812	n:1910000
Cons ci ratio: 1.455849e-03	ci left: 7.909085e-01	ci right 7.920613e-01	k: 1511737	n:1910000
KS ci ratio: 2.905558e-01	ci left: 8.146174e-05	ci right 1.096198e-04	k: 181	n:1910000
SLC26A11   1910000 perm   1751 sec   (1091 perm/sec)   p_kst 9.476440e-05   p_cons 7.914853e-01   p_joint 4.251309e-04

Joint ci ratio: 1.370304e-01	ci left: 3.968447e-04	ci right 4.557209e-04	k: 817	n:1920000
Cons ci ratio: 1.451839e-03	ci left: 7.909586e-01	ci right 7.921083e-01	k: 1519745	n:1920000
KS ci ratio: 2.897609e-01	ci left: 8.152039e-05	ci right 1.096075e-04	k: 182	n:1920000
SLC26A11   1920000 perm   1767 sec   (1087 perm/sec)   p_kst 9.479167e-05   p_cons 7.915339e-01   p_joint 4.255208e-04

Joint ci ratio: 1.367798e-01	ci left: 3.962896e-04	ci right 4.549673e-04	k: 820	n:1930000
Cons ci ratio: 1.448044e-03	ci left: 7.909666e-01	ci right 7.921133e-01	k: 1527673	n:1930000
KS ci ratio: 2.889724e-01	ci left: 8.157854e-05	ci right 1.095952e-04	k: 183	n:1930000
SLC26A11   1930000 perm   1784 sec   (1082 perm/sec)   p_kst 9.481865e-05   p_cons 7.915404e-01   p_joint 4.248705e-04

Joint ci ratio: 1.363652e-01	ci left: 3.967362e-04	ci right 4.552874e-04	k: 825	n:1940000
Cons ci ratio: 1.444394e-03	ci left: 7.909483e-01	ci right 7.920921e-01	k: 1535550	n:1940000
KS ci ratio: 2.881903e-01	ci left: 8.163619e-05	ci right 1.095830e-04	k: 184	n:1940000
SLC26A11   1940000 perm   1800 sec   (1078 perm/sec)   p_kst 9.484536e-05   p_cons 7.915206e-01   p_joint 4.252577e-04

Joint ci ratio: 1.357909e-01	ci left: 3.981692e-04	ci right 4.566645e-04	k: 832	n:1950000
Cons ci ratio: 1.440727e-03	ci left: 7.909404e-01	ci right 7.920813e-01	k: 1543447	n:1950000
KS ci ratio: 2.881904e-01	ci left: 8.121754e-05	ci right 1.090210e-04	k: 184	n:1950000
SLC26A11   1950000 perm   1817 sec   (1073 perm/sec)   p_kst 9.435897e-05   p_cons 7.915113e-01   p_joint 4.266667e-04

Joint ci ratio: 1.312214e-01	ci left: 4.252350e-04	ci right 4.854406e-04	k: 891	n:1960000
Cons ci ratio: 1.479378e-03	ci left: 7.811884e-01	ci right 7.823454e-01	k: 1532264	n:1960000
KS ci ratio: 2.874146e-01	ci left: 8.127654e-05	ci right 1.090117e-04	k: 185	n:1960000
SLC26A11   1960000 perm   1833 sec   (1069 perm/sec)   p_kst 9.438776e-05   p_cons 7.817673e-01   p_joint 4.545918e-04

Joint ci ratio: 1.310013e-01	ci left: 4.245494e-04	ci right 4.845492e-04	k: 894	n:1970000
Cons ci ratio: 1.475664e-03	ci left: 7.811794e-01	ci right 7.823335e-01	k: 1540061	n:1970000
KS ci ratio: 2.874147e-01	ci left: 8.086397e-05	ci right 1.084584e-04	k: 185	n:1970000
SLC26A11   1970000 perm   1849 sec   (1065 perm/sec)   p_kst 9.390863e-05   p_cons 7.817569e-01   p_joint 4.538071e-04

Joint ci ratio: 1.306369e-01	ci left: 4.248478e-04	ci right 4.847099e-04	k: 899	n:1980000
Cons ci ratio: 1.471862e-03	ci left: 7.811972e-01	ci right 7.823484e-01	k: 1547911	n:1980000
KS ci ratio: 2.866452e-01	ci left: 8.092426e-05	ci right 1.084519e-04	k: 186	n:1980000
SLC26A11   1980000 perm   1866 sec   (1061 perm/sec)   p_kst 9.393939e-05   p_cons 7.817732e-01   p_joint 4.540404e-04

Joint ci ratio: 1.312219e-01	ci left: 4.188244e-04	ci right 4.781225e-04	k: 891	n:1990000
Cons ci ratio: 1.468284e-03	ci left: 7.811697e-01	ci right 7.823180e-01	k: 1555671	n:1990000
KS ci ratio: 2.843730e-01	ci left: 8.191722e-05	ci right 1.095221e-04	k: 189	n:1990000
SLC26A11   1990000 perm   1883 sec   (1057 perm/sec)   p_kst 9.497487e-05   p_cons 7.817442e-01   p_joint 4.477387e-04

Joint ci ratio: 1.310018e-01	ci left: 4.181810e-04	ci right 4.772811e-04	k: 894	n:2000000
Cons ci ratio: 1.464455e-03	ci left: 7.812069e-01	ci right 7.823523e-01	k: 1563560	n:2000000
KS ci ratio: 2.836276e-01	ci left: 8.197202e-05	ci right 1.095100e-04	k: 190	n:2000000
SLC26A11   2000000 perm   1899 sec   (1053 perm/sec)   p_kst 9.500000e-05   p_cons 7.817800e-01   p_joint 4.470000e-04

Joint ci ratio: 1.307100e-01	ci left: 4.180254e-04	ci right 4.769617e-04	k: 898	n:2010000
Cons ci ratio: 1.460769e-03	ci left: 7.812174e-01	ci right 7.823599e-01	k: 1571396	n:2010000
KS ci ratio: 2.828880e-01	ci left: 8.202638e-05	ci right 1.094979e-04	k: 191	n:2010000
SLC26A11   2010000 perm   1916 sec   (1049 perm/sec)   p_kst 9.502488e-05   p_cons 7.817891e-01   p_joint 4.467662e-04

Joint ci ratio: 1.303481e-01	ci left: 4.183504e-04	ci right 4.771566e-04	k: 903	n:2020000
Cons ci ratio: 1.457091e-03	ci left: 7.812323e-01	ci right 7.823719e-01	k: 1579241	n:2020000
KS ci ratio: 2.814260e-01	ci left: 8.254036e-05	ci right 1.100158e-04	k: 193	n:2020000
SLC26A11   2020000 perm   1932 sec   (1046 perm/sec)   p_kst 9.554455e-05   p_cons 7.818025e-01   p_joint 4.470297e-04

Joint ci ratio: 1.302761e-01	ci left: 4.167661e-04	ci right 4.753147e-04	k: 904	n:2030000
Cons ci ratio: 1.453362e-03	ci left: 7.812657e-01	ci right 7.824025e-01	k: 1587124	n:2030000
KS ci ratio: 2.814261e-01	ci left: 8.213375e-05	ci right 1.094739e-04	k: 193	n:2030000
SLC26A11   2030000 perm   1949 sec   (1042 perm/sec)   p_kst 9.507389e-05   p_cons 7.818345e-01   p_joint 4.453202e-04

Joint ci ratio: 1.297751e-01	ci left: 4.180429e-04	ci right 4.765277e-04	k: 911	n:2040000
Cons ci ratio: 1.449750e-03	ci left: 7.812777e-01	ci right 7.824117e-01	k: 1594964	n:2040000
KS ci ratio: 2.807035e-01	ci left: 8.218678e-05	ci right 1.094619e-04	k: 194	n:2040000
SLC26A11   2040000 perm   1966 sec   (1038 perm/sec)   p_kst 9.509804e-05   p_cons 7.818451e-01   p_joint 4.465686e-04

Joint ci ratio: 1.295622e-01	ci left: 4.174196e-04	ci right 4.757140e-04	k: 914	n:2050000
Cons ci ratio: 1.446271e-03	ci left: 7.812647e-01	ci right 7.823959e-01	k: 1602753	n:2050000
KS ci ratio: 2.799865e-01	ci left: 8.223939e-05	ci right 1.094500e-04	k: 195	n:2050000
SLC26A11   2050000 perm   1983 sec   (1034 perm/sec)   p_kst 9.512195e-05   p_cons 7.818307e-01   p_joint 4.458537e-04

Joint ci ratio: 1.341118e-01	ci left: 3.867576e-04	ci right 4.428178e-04	k: 853	n:2060000
Cons ci ratio: 1.442814e-03	ci left: 7.812524e-01	ci right 7.823808e-01	k: 1610543	n:2060000
KS ci ratio: 2.799866e-01	ci left: 8.184016e-05	ci right 1.089187e-04	k: 195	n:2060000
SLC26A11   2060000 perm   2000 sec   (1030 perm/sec)   p_kst 9.466019e-05   p_cons 7.818170e-01   p_joint 4.140777e-04

Joint ci ratio: 1.391766e-01	ci left: 3.564272e-04	ci right 4.102040e-04	k: 792	n:2070000
Cons ci ratio: 1.439346e-03	ci left: 7.812488e-01	ci right 7.823746e-01	k: 1618351	n:2070000
KS ci ratio: 2.799867e-01	ci left: 8.144480e-05	ci right 1.083925e-04	k: 195	n:2070000
SLC26A11   2070000 perm   2016 sec   (1027 perm/sec)   p_kst 9.420290e-05   p_cons 7.818121e-01   p_joint 3.826087e-04

Joint ci ratio: 1.523308e-01	ci left: 2.940242e-04	ci right 3.429615e-04	k: 661	n:2080000
Cons ci ratio: 1.436050e-03	ci left: 7.812102e-01	ci right 7.823333e-01	k: 1626086	n:2080000
KS ci ratio: 2.771725e-01	ci left: 8.284200e-05	ci right 1.099284e-04	k: 199	n:2080000
SLC26A11   2080000 perm   2033 sec   (1023 perm/sec)   p_kst 9.567308e-05   p_cons 7.817721e-01   p_joint 3.177885e-04

Joint ci ratio: 1.522160e-01	ci left: 2.930776e-04	ci right 3.418173e-04	k: 662	n:2090000
Cons ci ratio: 1.432611e-03	ci left: 7.812112e-01	ci right 7.823316e-01	k: 1633903	n:2090000
KS ci ratio: 2.771725e-01	ci left: 8.244562e-05	ci right 1.094024e-04	k: 199	n:2090000
SLC26A11   2090000 perm   2050 sec   (1020 perm/sec)   p_kst 9.521531e-05   p_cons 7.817718e-01   p_joint 3.167464e-04

Joint ci ratio: 1.522161e-01	ci left: 2.916820e-04	ci right 3.401896e-04	k: 662	n:2100000
Cons ci ratio: 1.429226e-03	ci left: 7.812055e-01	ci right 7.823233e-01	k: 1641706	n:2100000
KS ci ratio: 2.771726e-01	ci left: 8.205302e-05	ci right 1.088815e-04	k: 199	n:2100000
SLC26A11   2100000 perm   2067 sec   (1016 perm/sec)   p_kst 9.476190e-05   p_cons 7.817648e-01   p_joint 3.152381e-04

Joint ci ratio: 1.517590e-01	ci left: 2.921233e-04	ci right 3.405451e-04	k: 666	n:2110000
Cons ci ratio: 1.425648e-03	ci left: 7.812516e-01	ci right 7.823666e-01	k: 1649618	n:2110000
KS ci ratio: 2.771727e-01	ci left: 8.166414e-05	ci right 1.083655e-04	k: 199	n:2110000
SLC26A11   2110000 perm   2084 sec   (1013 perm/sec)   p_kst 9.431280e-05   p_cons 7.818095e-01   p_joint 3.156398e-04

Joint ci ratio: 1.531434e-01	ci left: 2.853008e-04	ci right 3.330627e-04	k: 654	n:2120000
Cons ci ratio: 1.422109e-03	ci left: 7.812944e-01	ci right 7.824067e-01	k: 1657524	n:2120000
KS ci ratio: 2.764823e-01	ci left: 8.171789e-05	ci right 1.083587e-04	k: 200	n:2120000
SLC26A11   2120000 perm   2101 sec   (1009 perm/sec)   p_kst 9.433962e-05   p_cons 7.818509e-01   p_joint 3.084906e-04

Joint ci ratio: 1.529101e-01	ci left: 2.848643e-04	ci right 3.324739e-04	k: 656	n:2130000
Cons ci ratio: 1.418666e-03	ci left: 7.813199e-01	ci right 7.824296e-01	k: 1665394	n:2130000
KS ci ratio: 2.764824e-01	ci left: 8.133424e-05	ci right 1.078499e-04	k: 200	n:2130000
SLC26A11   2130000 perm   2118 sec   (1005 perm/sec)   p_kst 9.389671e-05   p_cons 7.818751e-01   p_joint 3.079812e-04

Joint ci ratio: 1.526780e-01	ci left: 2.844320e-04	ci right 3.318906e-04	k: 658	n:2140000
Cons ci ratio: 1.415285e-03	ci left: 7.813363e-01	ci right 7.824433e-01	k: 1673245	n:2140000
KS ci ratio: 2.757972e-01	ci left: 8.138911e-05	ci right 1.078455e-04	k: 201	n:2140000
SLC26A11   2140000 perm   2136 sec   (1002 perm/sec)   p_kst 9.392523e-05   p_cons 7.818902e-01   p_joint 3.074766e-04

Joint ci ratio: 1.521020e-01	ci left: 2.853460e-04	ci right 3.327611e-04	k: 663	n:2150000
Cons ci ratio: 1.412001e-03	ci left: 7.813348e-01	ci right 7.824393e-01	k: 1681058	n:2150000
KS ci ratio: 2.744418e-01	ci left: 8.187663e-05	ci right 1.083382e-04	k: 203	n:2150000
SLC26A11   2150000 perm   2153 sec   (998 perm/sec)   p_kst 9.441860e-05   p_cons 7.818874e-01   p_joint 3.083721e-04

Joint ci ratio: 1.518735e-01	ci left: 2.849157e-04	ci right 3.321817e-04	k: 665	n:2160000
Cons ci ratio: 1.408935e-03	ci left: 7.812861e-01	ci right 7.823881e-01	k: 1688769	n:2160000
KS ci ratio: 2.744419e-01	ci left: 8.149757e-05	ci right 1.078366e-04	k: 203	n:2160000
SLC26A11   2160000 perm   2172 sec   (995 perm/sec)   p_kst 9.398148e-05   p_cons 7.818375e-01   p_joint 3.078704e-04

Joint ci ratio: 1.517596e-01	ci left: 2.840460e-04	ci right 3.311292e-04	k: 666	n:2170000
Cons ci ratio: 1.405701e-03	ci left: 7.812835e-01	ci right 7.823830e-01	k: 1696579	n:2170000
KS ci ratio: 2.744419e-01	ci left: 8.112200e-05	ci right 1.073397e-04	k: 203	n:2170000
SLC26A11   2170000 perm   2190 sec   (991 perm/sec)   p_kst 9.354839e-05   p_cons 7.818336e-01   p_joint 3.069124e-04

Joint ci ratio: 1.513066e-01	ci left: 2.845084e-04	ci right 3.315146e-04	k: 670	n:2180000
Cons ci ratio: 1.402504e-03	ci left: 7.812773e-01	ci right 7.823742e-01	k: 1704381	n:2180000
KS ci ratio: 2.744420e-01	ci left: 8.074988e-05	ci right 1.068473e-04	k: 203	n:2180000
SLC26A11   2180000 perm   2208 sec   (987 perm/sec)   p_kst 9.311927e-05   p_cons 7.818261e-01   p_joint 3.073394e-04

Joint ci ratio: 1.507459e-01	ci left: 2.854061e-04	ci right 3.323702e-04	k: 675	n:2190000
Cons ci ratio: 1.399273e-03	ci left: 7.812848e-01	ci right 7.823793e-01	k: 1712213	n:2190000
KS ci ratio: 2.731064e-01	ci left: 8.123172e-05	ci right 1.073352e-04	k: 205	n:2190000
SLC26A11   2190000 perm   2226 sec   (984 perm/sec)   p_kst 9.360731e-05   p_cons 7.818324e-01   p_joint 3.082192e-04

Joint ci ratio: 1.499713e-01	ci left: 2.871709e-04	ci right 3.341608e-04	k: 682	n:2200000
Cons ci ratio: 1.396210e-03	ci left: 7.812564e-01	ci right 7.823484e-01	k: 1719966	n:2200000
KS ci ratio: 2.724460e-01	ci left: 8.128595e-05	ci right 1.073328e-04	k: 206	n:2200000
SLC26A11   2200000 perm   2244 sec   (981 perm/sec)   p_kst 9.363636e-05   p_cons 7.818027e-01   p_joint 3.100000e-04

Joint ci ratio: 1.494253e-01	ci left: 2.880492e-04	ci right 3.349959e-04	k: 687	n:2210000
Cons ci ratio: 1.393122e-03	ci left: 7.812395e-01	ci right 7.823290e-01	k: 1727744	n:2210000
KS ci ratio: 2.717902e-01	ci left: 8.133976e-05	ci right 1.073305e-04	k: 207	n:2210000
SLC26A11   2210000 perm   2262 sec   (977 perm/sec)   p_kst 9.366516e-05   p_cons 7.817846e-01   p_joint 3.108597e-04

Joint ci ratio: 1.491006e-01	ci left: 2.880526e-04	ci right 3.348887e-04	k: 690	n:2220000
Cons ci ratio: 1.389977e-03	ci left: 7.812417e-01	ci right 7.823288e-01	k: 1735564	n:2220000
KS ci ratio: 2.711392e-01	ci left: 8.139316e-05	ci right 1.073280e-04	k: 208	n:2220000
SLC26A11   2220000 perm   2280 sec   (974 perm/sec)   p_kst 9.369369e-05   p_cons 7.817856e-01   p_joint 3.108108e-04

Joint ci ratio: 1.508580e-01	ci left: 2.798551e-04	ci right 3.259431e-04	k: 674	n:2230000
Cons ci ratio: 1.386778e-03	ci left: 7.812623e-01	ci right 7.823469e-01	k: 1743425	n:2230000
KS ci ratio: 2.692138e-01	ci left: 8.228234e-05	ci right 1.082829e-04	k: 211	n:2230000
SLC26A11   2230000 perm   2298 sec   (970 perm/sec)   p_kst 9.461883e-05   p_cons 7.818049e-01   p_joint 3.022422e-04

Joint ci ratio: 1.507464e-01	ci left: 2.790353e-04	ci right 3.249513e-04	k: 675	n:2240000
Cons ci ratio: 1.383558e-03	ci left: 7.812934e-01	ci right 7.823755e-01	k: 1751310	n:2240000
KS ci ratio: 2.685811e-01	ci left: 8.233135e-05	ci right 1.082760e-04	k: 212	n:2240000
SLC26A11   2240000 perm   2317 sec   (967 perm/sec)   p_kst 9.464286e-05   p_cons 7.818348e-01   p_joint 3.013393e-04

Joint ci ratio: 1.501920e-01	ci left: 2.799337e-04	ci right 3.258129e-04	k: 680	n:2250000
Cons ci ratio: 1.380414e-03	ci left: 7.813109e-01	ci right 7.823906e-01	k: 1759165	n:2250000
KS ci ratio: 2.679529e-01	ci left: 8.237999e-05	ci right 1.082690e-04	k: 213	n:2250000
SLC26A11   2250000 perm   2335 sec   (963 perm/sec)   p_kst 9.466667e-05   p_cons 7.818511e-01   p_joint 3.022222e-04

Joint ci ratio: 1.498622e-01	ci left: 2.799727e-04	ci right 3.257485e-04	k: 683	n:2260000
Cons ci ratio: 1.377247e-03	ci left: 7.813393e-01	ci right 7.824166e-01	k: 1767045	n:2260000
KS ci ratio: 2.673290e-01	ci left: 8.242826e-05	ci right 1.082620e-04	k: 214	n:2260000
SLC26A11   2260000 perm   2353 sec   (960 perm/sec)   p_kst 9.469027e-05   p_cons 7.818783e-01   p_joint 3.022124e-04

Joint ci ratio: 1.498623e-01	ci left: 2.787393e-04	ci right 3.243135e-04	k: 683	n:2270000
Cons ci ratio: 1.374227e-03	ci left: 7.813362e-01	ci right 7.824111e-01	k: 1774854	n:2270000
KS ci ratio: 2.673291e-01	ci left: 8.206514e-05	ci right 1.077851e-04	k: 214	n:2270000
SLC26A11   2270000 perm   2372 sec   (957 perm/sec)   p_kst 9.427313e-05   p_cons 7.818740e-01   p_joint 3.008811e-04

Joint ci ratio: 1.498624e-01	ci left: 2.775168e-04	ci right 3.228911e-04	k: 683	n:2280000
Cons ci ratio: 1.371257e-03	ci left: 7.813256e-01	ci right 7.823982e-01	k: 1782646	n:2280000
KS ci ratio: 2.673291e-01	ci left: 8.170521e-05	ci right 1.073124e-04	k: 214	n:2280000
SLC26A11   2280000 perm   2390 sec   (954 perm/sec)   p_kst 9.385965e-05   p_cons 7.818623e-01   p_joint 2.995614e-04

Joint ci ratio: 1.497531e-01	ci left: 2.767252e-04	ci right 3.219341e-04	k: 684	n:2290000
Cons ci ratio: 1.368193e-03	ci left: 7.813436e-01	ci right 7.824138e-01	k: 1790503	n:2290000
KS ci ratio: 2.673292e-01	ci left: 8.134841e-05	ci right 1.068438e-04	k: 214	n:2290000
SLC26A11   2290000 perm   2409 sec   (951 perm/sec)   p_kst 9.344978e-05   p_cons 7.818790e-01   p_joint 2.986900e-04

Joint ci ratio: 1.494262e-01	ci left: 2.767776e-04	ci right 3.218875e-04	k: 687	n:2300000
Cons ci ratio: 1.365276e-03	ci left: 7.813296e-01	ci right 7.823975e-01	k: 1798287	n:2300000
KS ci ratio: 2.673292e-01	ci left: 8.099472e-05	ci right 1.063792e-04	k: 214	n:2300000
SLC26A11   2300000 perm   2427 sec   (948 perm/sec)   p_kst 9.304348e-05   p_cons 7.818639e-01   p_joint 2.986957e-04

Joint ci ratio: 1.492095e-01	ci left: 2.764129e-04	ci right 3.213922e-04	k: 689	n:2310000
Cons ci ratio: 1.362265e-03	ci left: 7.813439e-01	ci right 7.824095e-01	k: 1806136	n:2310000
KS ci ratio: 2.673293e-01	ci left: 8.064409e-05	ci right 1.059187e-04	k: 214	n:2310000
SLC26A11   2310000 perm   2446 sec   (944 perm/sec)   p_kst 9.264069e-05   p_cons 7.818771e-01   p_joint 2.982684e-04

Joint ci ratio: 1.486718e-01	ci left: 2.772963e-04	ci right 3.222423e-04	k: 694	n:2320000
Cons ci ratio: 1.359353e-03	ci left: 7.813383e-01	ci right 7.824015e-01	k: 1813939	n:2320000
KS ci ratio: 2.660944e-01	ci left: 8.110092e-05	ci right 1.063817e-04	k: 216	n:2320000
SLC26A11   2320000 perm   2464 sec   (941 perm/sec)   p_kst 9.310345e-05   p_cons 7.818703e-01   p_joint 2.991379e-04

Joint ci ratio: 1.482457e-01	ci left: 2.777592e-04	ci right 3.226397e-04	k: 698	n:2330000
Cons ci ratio: 1.356381e-03	ci left: 7.813524e-01	ci right 7.824134e-01	k: 1821788	n:2330000
KS ci ratio: 2.648765e-01	ci left: 8.155410e-05	ci right 1.068405e-04	k: 218	n:2330000
SLC26A11   2330000 perm   2484 sec   (938 perm/sec)   p_kst 9.356223e-05   p_cons 7.818833e-01   p_joint 2.995708e-04

Joint ci ratio: 1.419835e-01	ci left: 3.025184e-04	ci right 3.491601e-04	k: 761	n:2340000
Cons ci ratio: 1.353427e-03	ci left: 7.813669e-01	ci right 7.824256e-01	k: 1829638	n:2340000
KS ci ratio: 2.636752e-01	ci left: 8.200366e-05	ci right 1.072951e-04	k: 220	n:2340000
SLC26A11   2340000 perm   2503 sec   (935 perm/sec)   p_kst 9.401709e-05   p_cons 7.818966e-01   p_joint 3.252137e-04

Joint ci ratio: 1.417975e-01	ci left: 3.020520e-04	ci right 3.485556e-04	k: 763	n:2350000
Cons ci ratio: 1.350487e-03	ci left: 7.813825e-01	ci right 7.824389e-01	k: 1837491	n:2350000
KS ci ratio: 2.630807e-01	ci left: 8.205215e-05	ci right 1.072921e-04	k: 221	n:2350000
SLC26A11   2350000 perm   2522 sec   (932 perm/sec)   p_kst 9.404255e-05   p_cons 7.819111e-01   p_joint 3.246809e-04

Joint ci ratio: 1.417049e-01	ci left: 3.011808e-04	ci right 3.475174e-04	k: 764	n:2360000
Cons ci ratio: 1.347611e-03	ci left: 7.813866e-01	ci right 7.824407e-01	k: 1845317	n:2360000
KS ci ratio: 2.630807e-01	ci left: 8.170447e-05	ci right 1.068375e-04	k: 221	n:2360000
SLC26A11   2360000 perm   2542 sec   (929 perm/sec)   p_kst 9.364407e-05   p_cons 7.819140e-01   p_joint 3.237288e-04

Joint ci ratio: 1.414279e-01	ci left: 3.011310e-04	ci right 3.473617e-04	k: 767	n:2370000
Cons ci ratio: 1.344780e-03	ci left: 7.813838e-01	ci right 7.824357e-01	k: 1853127	n:2370000
KS ci ratio: 2.619036e-01	ci left: 8.214809e-05	ci right 1.072860e-04	k: 223	n:2370000
SLC26A11   2370000 perm   2561 sec   (925 perm/sec)   p_kst 9.409283e-05   p_cons 7.819101e-01   p_joint 3.236287e-04

Joint ci ratio: 1.411525e-01	ci left: 3.010817e-04	ci right 3.472072e-04	k: 770	n:2380000
Cons ci ratio: 1.341969e-03	ci left: 7.813807e-01	ci right 7.824304e-01	k: 1860936	n:2380000
KS ci ratio: 2.619036e-01	ci left: 8.180293e-05	ci right 1.068352e-04	k: 223	n:2380000
SLC26A11   2380000 perm   2580 sec   (922 perm/sec)   p_kst 9.369748e-05   p_cons 7.819059e-01   p_joint 3.235294e-04

Joint ci ratio: 1.406969e-01	ci left: 3.018402e-04	ci right 3.479202e-04	k: 775	n:2390000
Cons ci ratio: 1.339235e-03	ci left: 7.813621e-01	ci right 7.824096e-01	k: 1868708	n:2390000
KS ci ratio: 2.607421e-01	ci left: 8.224267e-05	ci right 1.072797e-04	k: 225	n:2390000
SLC26A11   2390000 perm   2599 sec   (919 perm/sec)   p_kst 9.414226e-05   p_cons 7.818862e-01   p_joint 3.242678e-04

Joint ci ratio: 1.398879e-01	ci left: 3.042009e-04	ci right 3.503521e-04	k: 784	n:2400000
Cons ci ratio: 1.336459e-03	ci left: 7.813591e-01	ci right 7.824044e-01	k: 1876517	n:2400000
KS ci ratio: 2.595960e-01	ci left: 8.267898e-05	ci right 1.077202e-04	k: 227	n:2400000
SLC26A11   2400000 perm   2619 sec   (916 perm/sec)   p_kst 9.458333e-05   p_cons 7.818821e-01   p_joint 3.266667e-04

Joint ci ratio: 1.397101e-01	ci left: 3.037395e-04	ci right 3.497572e-04	k: 786	n:2410000
Cons ci ratio: 1.333769e-03	ci left: 7.813382e-01	ci right 7.823814e-01	k: 1884283	n:2410000
KS ci ratio: 2.595960e-01	ci left: 8.233592e-05	ci right 1.072733e-04	k: 227	n:2410000
SLC26A11   2410000 perm   2638 sec   (913 perm/sec)   p_kst 9.419087e-05   p_cons 7.818602e-01   p_joint 3.261411e-04

Joint ci ratio: 1.394445e-01	ci left: 3.036808e-04	ci right 3.495949e-04	k: 789	n:2420000
Cons ci ratio: 1.331032e-03	ci left: 7.813337e-01	ci right 7.823747e-01	k: 1892088	n:2420000
KS ci ratio: 2.595961e-01	ci left: 8.199568e-05	ci right 1.068300e-04	k: 227	n:2420000
SLC26A11   2420000 perm   2658 sec   (910 perm/sec)   p_kst 9.380165e-05   p_cons 7.818545e-01   p_joint 3.260331e-04

Joint ci ratio: 1.392684e-01	ci left: 3.032254e-04	ci right 3.490079e-04	k: 791	n:2430000
Cons ci ratio: 1.328378e-03	ci left: 7.813123e-01	ci right 7.823512e-01	k: 1899852	n:2430000
KS ci ratio: 2.595961e-01	ci left: 8.165825e-05	ci right 1.063904e-04	k: 227	n:2430000
SLC26A11   2430000 perm   2678 sec   (908 perm/sec)   p_kst 9.341564e-05   p_cons 7.818321e-01   p_joint 3.255144e-04

Joint ci ratio: 1.389180e-01	ci left: 3.035650e-04	ci right 3.492739e-04	k: 795	n:2440000
Cons ci ratio: 1.325598e-03	ci left: 7.813276e-01	ci right 7.823644e-01	k: 1907705	n:2440000
KS ci ratio: 2.590287e-01	ci left: 8.170678e-05	ci right 1.063908e-04	k: 228	n:2440000
SLC26A11   2440000 perm   2697 sec   (905 perm/sec)   p_kst 9.344262e-05   p_cons 7.818463e-01   p_joint 3.258197e-04

Joint ci ratio: 1.387439e-01	ci left: 3.031139e-04	ci right 3.486930e-04	k: 797	n:2450000
Cons ci ratio: 1.322840e-03	ci left: 7.813415e-01	ci right 7.823762e-01	k: 1915555	n:2450000
KS ci ratio: 2.590287e-01	ci left: 8.137329e-05	ci right 1.059565e-04	k: 228	n:2450000
SLC26A11   2450000 perm   2717 sec   (902 perm/sec)   p_kst 9.306122e-05   p_cons 7.818592e-01   p_joint 3.253061e-04

Joint ci ratio: 1.385704e-01	ci left: 3.026666e-04	ci right 3.481167e-04	k: 799	n:2460000
Cons ci ratio: 1.320219e-03	ci left: 7.813244e-01	ci right 7.823570e-01	k: 1923329	n:2460000
KS ci ratio: 2.590288e-01	ci left: 8.104250e-05	ci right 1.055258e-04	k: 228	n:2460000
SLC26A11   2460000 perm   2738 sec   (899 perm/sec)   p_kst 9.268293e-05   p_cons 7.818411e-01   p_joint 3.247967e-04

Joint ci ratio: 1.761732e-01	ci left: 1.827515e-04	ci right 2.184376e-04	k: 494	n:2470000
Cons ci ratio: 1.317646e-03	ci left: 7.812990e-01	ci right 7.823295e-01	k: 1931082	n:2470000
KS ci ratio: 2.843757e-01	ci left: 6.599800e-05	ci right 8.823858e-05	k: 189	n:2470000
SLC26A11   2470000 perm   2758 sec   (896 perm/sec)   p_kst 7.651822e-05   p_cons 7.818146e-01   p_joint 2.000000e-04

Joint ci ratio: 1.758184e-01	ci left: 1.827855e-04	ci right 2.183987e-04	k: 496	n:2480000
Cons ci ratio: 1.315008e-03	ci left: 7.812943e-01	ci right 7.823228e-01	k: 1938886	n:2480000
KS ci ratio: 2.843757e-01	ci left: 6.573188e-05	ci right 8.788278e-05	k: 189	n:2480000
SLC26A11   2480000 perm   2778 sec   (893 perm/sec)   p_kst 7.620968e-05   p_cons 7.818089e-01   p_joint 2.000000e-04

Joint ci ratio: 1.767098e-01	ci left: 1.801320e-04	ci right 2.154251e-04	k: 491	n:2490000
Cons ci ratio: 1.312456e-03	ci left: 7.812716e-01	ci right 7.822980e-01	k: 1946645	n:2490000
KS ci ratio: 2.836303e-01	ci left: 6.584090e-05	ci right 8.795997e-05	k: 190	n:2490000
SLC26A11   2490000 perm   2798 sec   (890 perm/sec)   p_kst 7.630522e-05   p_cons 7.817851e-01   p_joint 1.971888e-04

Joint ci ratio: 1.767098e-01	ci left: 1.794114e-04	ci right 2.145634e-04	k: 491	n:2500000
Cons ci ratio: 1.309746e-03	ci left: 7.812943e-01	ci right 7.823186e-01	k: 1954517	n:2500000
KS ci ratio: 2.836304e-01	ci left: 6.557754e-05	ci right 8.760813e-05	k: 190	n:2500000
SLC26A11   2500000 perm   2818 sec   (887 perm/sec)   p_kst 7.600000e-05   p_cons 7.818068e-01   p_joint 1.964000e-04

Joint ci ratio: 1.761735e-01	ci left: 1.798391e-04	ci right 2.149565e-04	k: 494	n:2510000
Cons ci ratio: 1.307131e-03	ci left: 7.812961e-01	ci right 7.823184e-01	k: 1962337	n:2510000
KS ci ratio: 2.828908e-01	ci left: 6.568638e-05	ci right 8.768573e-05	k: 191	n:2510000
SLC26A11   2510000 perm   2839 sec   (884 perm/sec)   p_kst 7.609562e-05   p_cons 7.818076e-01   p_joint 1.968127e-04

Joint ci ratio: 1.759958e-01	ci left: 1.795048e-04	ci right 2.145178e-04	k: 495	n:2520000
Cons ci ratio: 1.304599e-03	ci left: 7.812804e-01	ci right 7.823007e-01	k: 1970113	n:2520000
KS ci ratio: 2.828908e-01	ci left: 6.542572e-05	ci right 8.733777e-05	k: 191	n:2520000
SLC26A11   2520000 perm   2859 sec   (881 perm/sec)   p_kst 7.579365e-05   p_cons 7.817909e-01   p_joint 1.964286e-04

Joint ci ratio: 1.754660e-01	ci left: 1.799289e-04	ci right 2.149078e-04	k: 498	n:2530000
Cons ci ratio: 1.301967e-03	ci left: 7.812949e-01	ci right 7.823132e-01	k: 1977965	n:2530000
KS ci ratio: 2.814288e-01	ci left: 6.590170e-05	ci right 8.783886e-05	k: 193	n:2530000
SLC26A11   2530000 perm   2880 sec   (879 perm/sec)   p_kst 7.628458e-05   p_cons 7.818043e-01   p_joint 1.968379e-04

Joint ci ratio: 1.749408e-01	ci left: 1.803498e-04	ci right 2.152945e-04	k: 501	n:2540000
Cons ci ratio: 1.299394e-03	ci left: 7.812979e-01	ci right 7.823141e-01	k: 1985788	n:2540000
KS ci ratio: 2.814288e-01	ci left: 6.564225e-05	ci right 8.749304e-05	k: 193	n:2540000
SLC26A11   2540000 perm   2900 sec   (876 perm/sec)   p_kst 7.598425e-05   p_cons 7.818063e-01   p_joint 1.972441e-04

Joint ci ratio: 1.744204e-01	ci left: 1.807676e-04	ci right 2.156781e-04	k: 504	n:2550000
Cons ci ratio: 1.296742e-03	ci left: 7.813255e-01	ci right 7.823397e-01	k: 1993674	n:2550000
KS ci ratio: 2.807062e-01	ci left: 6.574934e-05	ci right 8.756966e-05	k: 194	n:2550000
SLC26A11   2550000 perm   2920 sec   (873 perm/sec)   p_kst 7.607843e-05   p_cons 7.818329e-01   p_joint 1.976471e-04

Joint ci ratio: 1.740760e-01	ci left: 1.808087e-04	ci right 2.156509e-04	k: 506	n:2560000
Cons ci ratio: 1.294313e-03	ci left: 7.812986e-01	ci right 7.823109e-01	k: 2001421	n:2560000
KS ci ratio: 2.807063e-01	ci left: 6.549251e-05	ci right 8.722759e-05	k: 194	n:2560000
SLC26A11   2560000 perm   2941 sec   (871 perm/sec)   p_kst 7.578125e-05   p_cons 7.818051e-01   p_joint 1.976562e-04

Joint ci ratio: 1.740761e-01	ci left: 1.801051e-04	ci right 2.148118e-04	k: 506	n:2570000
Cons ci ratio: 1.291730e-03	ci left: 7.813159e-01	ci right 7.823262e-01	k: 2009281	n:2570000
KS ci ratio: 2.807063e-01	ci left: 6.523767e-05	ci right 8.688819e-05	k: 194	n:2570000
SLC26A11   2570000 perm   2961 sec   (868 perm/sec)   p_kst 7.548638e-05   p_cons 7.818214e-01   p_joint 1.968872e-04

Joint ci ratio: 1.739047e-01	ci left: 1.797778e-04	ci right 2.143836e-04	k: 507	n:2580000
Cons ci ratio: 1.289207e-03	ci left: 7.813215e-01	ci right 7.823298e-01	k: 2017111	n:2580000
KS ci ratio: 2.807064e-01	ci left: 6.498481e-05	ci right 8.655141e-05	k: 194	n:2580000
SLC26A11   2580000 perm   2981 sec   (865 perm/sec)   p_kst 7.519380e-05   p_cons 7.818260e-01   p_joint 1.965116e-04

Joint ci ratio: 1.737338e-01	ci left: 1.794529e-04	ci right 2.139588e-04	k: 508	n:2590000
Cons ci ratio: 1.286828e-03	ci left: 7.812926e-01	ci right 7.822990e-01	k: 2024852	n:2590000
KS ci ratio: 2.799894e-01	ci left: 6.509287e-05	ci right 8.663041e-05	k: 195	n:2590000
SLC26A11   2590000 perm   3002 sec   (863 perm/sec)   p_kst 7.528958e-05   p_cons 7.817961e-01   p_joint 1.961390e-04

Joint ci ratio: 1.733935e-01	ci left: 1.794985e-04	ci right 2.139385e-04	k: 510	n:2600000
Cons ci ratio: 1.284267e-03	ci left: 7.813159e-01	ci right 7.823204e-01	k: 2032728	n:2600000
KS ci ratio: 2.792778e-01	ci left: 6.520016e-05	ci right 8.670873e-05	k: 196	n:2600000
SLC26A11   2600000 perm   3022 sec   (860 perm/sec)   p_kst 7.538462e-05   p_cons 7.818185e-01   p_joint 1.961538e-04

Joint ci ratio: 1.728867e-01	ci left: 1.799104e-04	ci right 2.143180e-04	k: 513	n:2610000
Cons ci ratio: 1.281717e-03	ci left: 7.813402e-01	ci right 7.823427e-01	k: 2040607	n:2610000
KS ci ratio: 2.785716e-01	ci left: 6.530670e-05	ci right 8.678638e-05	k: 197	n:2610000
SLC26A11   2610000 perm   3043 sec   (858 perm/sec)   p_kst 7.547893e-05   p_cons 7.818418e-01   p_joint 1.965517e-04

Joint ci ratio: 1.754666e-01	ci left: 1.737481e-04	ci right 2.075255e-04	k: 498	n:2620000
Cons ci ratio: 1.279435e-03	ci left: 7.812967e-01	ci right 7.822973e-01	k: 2048309	n:2620000
KS ci ratio: 2.785717e-01	ci left: 6.505743e-05	ci right 8.645514e-05	k: 197	n:2620000
SLC26A11   2620000 perm   3064 sec   (855 perm/sec)   p_kst 7.519084e-05   p_cons 7.817973e-01   p_joint 1.900763e-04

Joint ci ratio: 1.754666e-01	ci left: 1.730874e-04	ci right 2.067365e-04	k: 498	n:2630000
Cons ci ratio: 1.277002e-03	ci left: 7.812973e-01	ci right 7.822960e-01	k: 2056126	n:2630000
KS ci ratio: 2.785717e-01	ci left: 6.481006e-05	ci right 8.612641e-05	k: 197	n:2630000
SLC26A11   2630000 perm   3085 sec   (853 perm/sec)   p_kst 7.490494e-05   p_cons 7.817970e-01   p_joint 1.893536e-04

Joint ci ratio: 1.749415e-01	ci left: 1.735183e-04	ci right 2.071395e-04	k: 501	n:2640000
Cons ci ratio: 1.274547e-03	ci left: 7.813073e-01	ci right 7.823042e-01	k: 2063968	n:2640000
KS ci ratio: 2.785718e-01	ci left: 6.456457e-05	ci right 8.580018e-05	k: 197	n:2640000
SLC26A11   2640000 perm   3106 sec   (850 perm/sec)   p_kst 7.462121e-05   p_cons 7.818061e-01   p_joint 1.897727e-04

Joint ci ratio: 1.742486e-01	ci left: 1.743070e-04	ci right 2.079332e-04	k: 505	n:2650000
Cons ci ratio: 1.272160e-03	ci left: 7.813030e-01	ci right 7.822979e-01	k: 2071772	n:2650000
KS ci ratio: 2.778709e-01	ci left: 6.467197e-05	ci right 8.588002e-05	k: 198	n:2650000
SLC26A11   2650000 perm   3127 sec   (847 perm/sec)   p_kst 7.471698e-05   p_cons 7.818008e-01   p_joint 1.905660e-04

Joint ci ratio: 1.739052e-01	ci left: 1.743709e-04	ci right 2.079361e-04	k: 507	n:2660000
Cons ci ratio: 1.269762e-03	ci left: 7.813050e-01	ci right 7.822981e-01	k: 2079593	n:2660000
KS ci ratio: 2.771754e-01	ci left: 6.477862e-05	ci right 8.595920e-05	k: 199	n:2660000
SLC26A11   2660000 perm   3149 sec   (845 perm/sec)   p_kst 7.481203e-05   p_cons 7.818019e-01   p_joint 1.906015e-04

Joint ci ratio: 1.737344e-01	ci left: 1.740760e-04	ci right 2.075481e-04	k: 508	n:2670000
Cons ci ratio: 1.267357e-03	ci left: 7.813127e-01	ci right 7.823039e-01	k: 2087429	n:2670000
KS ci ratio: 2.771754e-01	ci left: 6.453600e-05	ci right 8.563726e-05	k: 199	n:2670000
SLC26A11   2670000 perm   3170 sec   (842 perm/sec)   p_kst 7.453184e-05   p_cons 7.818086e-01   p_joint 1.902622e-04

Joint ci ratio: 1.735640e-01	ci left: 1.737834e-04	ci right 2.071630e-04	k: 509	n:2680000
Cons ci ratio: 1.265003e-03	ci left: 7.813102e-01	ci right 7.822996e-01	k: 2095238	n:2680000
KS ci ratio: 2.764851e-01	ci left: 6.464243e-05	ci right 8.571668e-05	k: 200	n:2680000
SLC26A11   2680000 perm   3193 sec   (839 perm/sec)   p_kst 7.462687e-05   p_cons 7.818052e-01   p_joint 1.899254e-04

Joint ci ratio: 1.730557e-01	ci left: 1.742042e-04	ci right 2.075564e-04	k: 512	n:2690000
Cons ci ratio: 1.262702e-03	ci left: 7.812970e-01	ci right 7.822845e-01	k: 2103018	n:2690000
KS ci ratio: 2.764851e-01	ci left: 6.440212e-05	ci right 8.539803e-05	k: 200	n:2690000
SLC26A11   2690000 perm   3215 sec   (837 perm/sec)   p_kst 7.434944e-05   p_cons 7.817911e-01   p_joint 1.903346e-04

Joint ci ratio: 1.727193e-01	ci left: 1.742677e-04	ci right 2.075605e-04	k: 514	n:2700000
Cons ci ratio: 1.260368e-03	ci left: 7.812961e-01	ci right 7.822818e-01	k: 2110831	n:2700000
KS ci ratio: 2.757999e-01	ci left: 6.450833e-05	ci right 8.547770e-05	k: 201	n:2700000
SLC26A11   2700000 perm   3237 sec   (834 perm/sec)   p_kst 7.444444e-05   p_cons 7.817893e-01   p_joint 1.903704e-04

Joint ci ratio: 1.723849e-01	ci left: 1.743308e-04	ci right 2.075644e-04	k: 516	n:2710000
Cons ci ratio: 1.258186e-03	ci left: 7.812575e-01	ci right 7.822415e-01	k: 2118542	n:2710000
KS ci ratio: 2.751197e-01	ci left: 6.461381e-05	ci right 8.555670e-05	k: 202	n:2710000
SLC26A11   2710000 perm   3258 sec   (832 perm/sec)   p_kst 7.453875e-05   p_cons 7.817498e-01   p_joint 1.904059e-04

Joint ci ratio: 1.715572e-01	ci left: 1.754490e-04	ci right 2.087186e-04	k: 521	n:2720000
Cons ci ratio: 1.255805e-03	ci left: 7.812763e-01	ci right 7.822584e-01	k: 2126408	n:2720000
KS ci ratio: 2.744446e-01	ci left: 6.471858e-05	ci right 8.563507e-05	k: 203	n:2720000
SLC26A11   2720000 perm   3280 sec   (829 perm/sec)   p_kst 7.463235e-05   p_cons 7.817676e-01   p_joint 1.915441e-04

Joint ci ratio: 1.712295e-01	ci left: 1.755075e-04	ci right 2.087180e-04	k: 523	n:2730000
Cons ci ratio: 1.253613e-03	ci left: 7.812473e-01	ci right 7.822276e-01	k: 2134144	n:2730000
KS ci ratio: 2.737743e-01	ci left: 6.482264e-05	ci right 8.571280e-05	k: 204	n:2730000
SLC26A11   2730000 perm   3302 sec   (827 perm/sec)   p_kst 7.472527e-05   p_cons 7.817377e-01   p_joint 1.915751e-04

Joint ci ratio: 1.709037e-01	ci left: 1.755656e-04	ci right 2.087174e-04	k: 525	n:2740000
Cons ci ratio: 1.251395e-03	ci left: 7.812287e-01	ci right 7.822072e-01	k: 2141908	n:2740000
KS ci ratio: 2.731090e-01	ci left: 6.492600e-05	ci right 8.578990e-05	k: 205	n:2740000
SLC26A11   2740000 perm   3324 sec   (824 perm/sec)   p_kst 7.481752e-05   p_cons 7.817182e-01   p_joint 1.916058e-04

Joint ci ratio: 1.751167e-01	ci left: 1.662298e-04	ci right 1.984744e-04	k: 500	n:2750000
Cons ci ratio: 1.249023e-03	ci left: 7.812553e-01	ci right 7.822321e-01	k: 2149796	n:2750000
KS ci ratio: 2.731091e-01	ci left: 6.468991e-05	ci right 8.547794e-05	k: 205	n:2750000
SLC26A11   2750000 perm   3345 sec   (822 perm/sec)   p_kst 7.454545e-05   p_cons 7.817440e-01   p_joint 1.818182e-04

Joint ci ratio: 1.751168e-01	ci left: 1.656276e-04	ci right 1.977553e-04	k: 500	n:2760000
Cons ci ratio: 1.246923e-03	ci left: 7.812111e-01	ci right 7.821861e-01	k: 2157489	n:2760000
KS ci ratio: 2.731091e-01	ci left: 6.445552e-05	ci right 8.516824e-05	k: 205	n:2760000
SLC26A11   2760000 perm   3367 sec   (820 perm/sec)   p_kst 7.427536e-05   p_cons 7.816989e-01   p_joint 1.811594e-04

Joint ci ratio: 1.745948e-01	ci left: 1.660653e-04	ci right 1.981718e-04	k: 503	n:2770000
Cons ci ratio: 1.244644e-03	ci left: 7.812192e-01	ci right 7.821925e-01	k: 2165326	n:2770000
KS ci ratio: 2.724486e-01	ci left: 6.455916e-05	ci right 8.524642e-05	k: 206	n:2770000
SLC26A11   2770000 perm   3389 sec   (817 perm/sec)   p_kst 7.436823e-05   p_cons 7.817061e-01   p_joint 1.815884e-04

Joint ci ratio: 1.744218e-01	ci left: 1.658119e-04	ci right 1.978344e-04	k: 504	n:2780000
Cons ci ratio: 1.242392e-03	ci left: 7.812233e-01	ci right 7.821948e-01	k: 2173152	n:2780000
KS ci ratio: 2.717929e-01	ci left: 6.466210e-05	ci right 8.532397e-05	k: 207	n:2780000
SLC26A11   2780000 perm   3412 sec   (815 perm/sec)   p_kst 7.446043e-05   p_cons 7.817094e-01   p_joint 1.812950e-04

Joint ci ratio: 1.737351e-01	ci left: 1.665888e-04	ci right 1.986214e-04	k: 508	n:2790000
Cons ci ratio: 1.240226e-03	ci left: 7.812069e-01	ci right 7.821767e-01	k: 2180921	n:2790000
KS ci ratio: 2.711419e-01	ci left: 6.476437e-05	ci right 8.540090e-05	k: 208	n:2790000
SLC26A11   2790000 perm   3434 sec   (812 perm/sec)   p_kst 7.455197e-05   p_cons 7.816921e-01   p_joint 1.820789e-04

Joint ci ratio: 1.735647e-01	ci left: 1.663355e-04	ci right 1.982847e-04	k: 509	n:2800000
Cons ci ratio: 1.237959e-03	ci left: 7.812218e-01	ci right 7.821898e-01	k: 2188777	n:2800000
KS ci ratio: 2.711419e-01	ci left: 6.453307e-05	ci right 8.509590e-05	k: 208	n:2800000
SLC26A11   2800000 perm   3457 sec   (810 perm/sec)   p_kst 7.428571e-05   p_cons 7.817061e-01   p_joint 1.817857e-04

Joint ci ratio: 1.733948e-01	ci left: 1.660840e-04	ci right 1.979503e-04	k: 510	n:2810000
Cons ci ratio: 1.235721e-03	ci left: 7.812319e-01	ci right 7.821982e-01	k: 2196620	n:2810000
KS ci ratio: 2.704955e-01	ci left: 6.463512e-05	ci right 8.517305e-05	k: 209	n:2810000
SLC26A11   2810000 perm   3480 sec   (807 perm/sec)   p_kst 7.437722e-05   p_cons 7.817153e-01   p_joint 1.814947e-04

Joint ci ratio: 1.779827e-01	ci left: 1.566804e-04	ci right 1.876237e-04	k: 484	n:2820000
Cons ci ratio: 1.233484e-03	ci left: 7.812447e-01	ci right 7.822093e-01	k: 2204471	n:2820000
KS ci ratio: 2.704956e-01	ci left: 6.440592e-05	ci right 8.487101e-05	k: 209	n:2820000
SLC26A11   2820000 perm   3502 sec   (805 perm/sec)   p_kst 7.411348e-05   p_cons 7.817273e-01   p_joint 1.716312e-04

Joint ci ratio: 1.779827e-01	ci left: 1.561268e-04	ci right 1.869607e-04	k: 484	n:2830000
Cons ci ratio: 1.231251e-03	ci left: 7.812600e-01	ci right 7.822228e-01	k: 2212329	n:2830000
KS ci ratio: 2.704956e-01	ci left: 6.417833e-05	ci right 8.457112e-05	k: 209	n:2830000
SLC26A11   2830000 perm   3525 sec   (803 perm/sec)   p_kst 7.385159e-05   p_cons 7.817417e-01   p_joint 1.710247e-04

Joint ci ratio: 1.777996e-01	ci left: 1.559135e-04	ci right 1.866701e-04	k: 485	n:2840000
Cons ci ratio: 1.229118e-03	ci left: 7.812508e-01	ci right 7.822120e-01	k: 2220118	n:2840000
KS ci ratio: 2.704957e-01	ci left: 6.395235e-05	ci right 8.427333e-05	k: 209	n:2840000
SLC26A11   2840000 perm   3547 sec   (801 perm/sec)   p_kst 7.359155e-05   p_cons 7.817317e-01   p_joint 1.707746e-04

Joint ci ratio: 1.725527e-01	ci left: 1.654314e-04	ci right 1.970024e-04	k: 515	n:2850000
Cons ci ratio: 1.226981e-03	ci left: 7.812456e-01	ci right 7.822051e-01	k: 2227918	n:2850000
KS ci ratio: 2.698539e-01	ci left: 6.405507e-05	ci right 8.435223e-05	k: 210	n:2850000
SLC26A11   2850000 perm   3570 sec   (798 perm/sec)   p_kst 7.368421e-05   p_cons 7.817256e-01   p_joint 1.807018e-04

Joint ci ratio: 1.722193e-01	ci left: 1.655221e-04	ci right 1.970430e-04	k: 517	n:2860000
Cons ci ratio: 1.224838e-03	ci left: 7.812453e-01	ci right 7.822031e-01	k: 2235732	n:2860000
KS ci ratio: 2.698539e-01	ci left: 6.383110e-05	ci right 8.405729e-05	k: 210	n:2860000
SLC26A11   2860000 perm   3593 sec   (796 perm/sec)   p_kst 7.342657e-05   p_cons 7.817245e-01   p_joint 1.807692e-04

Joint ci ratio: 1.718878e-01	ci left: 1.656122e-04	ci right 1.970833e-04	k: 519	n:2870000
Cons ci ratio: 1.222654e-03	ci left: 7.812596e-01	ci right 7.822158e-01	k: 2243588	n:2870000
KS ci ratio: 2.692167e-01	ci left: 6.393358e-05	ci right 8.413633e-05	k: 211	n:2870000
SLC26A11   2870000 perm   3616 sec   (794 perm/sec)   p_kst 7.351916e-05   p_cons 7.817380e-01   p_joint 1.808362e-04

Joint ci ratio: 1.717228e-01	ci left: 1.653695e-04	ci right 1.967611e-04	k: 520	n:2880000
Cons ci ratio: 1.220561e-03	ci left: 7.812516e-01	ci right 7.822061e-01	k: 2251380	n:2880000
KS ci ratio: 2.685840e-01	ci left: 6.403541e-05	ci right 8.421476e-05	k: 212	n:2880000
SLC26A11   2880000 perm   3639 sec   (791 perm/sec)   p_kst 7.361111e-05   p_cons 7.817292e-01   p_joint 1.805556e-04

Joint ci ratio: 1.404296e-01	ci left: 2.506198e-04	ci right 2.888015e-04	k: 778	n:2890000
Cons ci ratio: 1.218433e-03	ci left: 7.812565e-01	ci right 7.822093e-01	k: 2259209	n:2890000
KS ci ratio: 2.679557e-01	ci left: 6.413658e-05	ci right 8.429260e-05	k: 213	n:2890000
SLC26A11   2890000 perm   3662 sec   (789 perm/sec)   p_kst 7.370242e-05   p_cons 7.817332e-01   p_joint 2.692042e-04

Joint ci ratio: 1.400704e-01	ci left: 2.510865e-04	ci right 2.892333e-04	k: 782	n:2900000
Cons ci ratio: 1.216311e-03	ci left: 7.812628e-01	ci right 7.822139e-01	k: 2267042	n:2900000
KS ci ratio: 2.679558e-01	ci left: 6.391542e-05	ci right 8.400193e-05	k: 213	n:2900000
SLC26A11   2900000 perm   3685 sec   (787 perm/sec)   p_kst 7.344828e-05   p_cons 7.817386e-01   p_joint 2.696552e-04

Joint ci ratio: 1.398029e-01	ci left: 2.512185e-04	ci right 2.893064e-04	k: 785	n:2910000
Cons ci ratio: 1.214132e-03	ci left: 7.812882e-01	ci right 7.822377e-01	k: 2274931	n:2910000
KS ci ratio: 2.673319e-01	ci left: 6.401637e-05	ci right 8.407991e-05	k: 214	n:2910000
SLC26A11   2910000 perm   3708 sec   (785 perm/sec)   p_kst 7.353952e-05   p_cons 7.817632e-01   p_joint 2.697595e-04

Joint ci ratio: 1.394484e-01	ci left: 2.516802e-04	ci right 2.897333e-04	k: 789	n:2920000
Cons ci ratio: 1.212103e-03	ci left: 7.812744e-01	ci right 7.822223e-01	k: 2282706	n:2920000
KS ci ratio: 2.673319e-01	ci left: 6.379713e-05	ci right 8.379197e-05	k: 214	n:2920000
SLC26A11   2920000 perm   3741 sec   (781 perm/sec)   p_kst 7.328767e-05   p_cons 7.817486e-01   p_joint 2.702055e-04

Joint ci ratio: 1.392723e-01	ci left: 2.514800e-04	ci right 2.894508e-04	k: 791	n:2930000
Cons ci ratio: 1.210042e-03	ci left: 7.812727e-01	ci right 7.822189e-01	k: 2290516	n:2930000
KS ci ratio: 2.667123e-01	ci left: 6.389785e-05	ci right 8.387008e-05	k: 215	n:2930000
SLC26A11   2930000 perm   3765 sec   (778 perm/sec)   p_kst 7.337884e-05   p_cons 7.817461e-01   p_joint 2.699659e-04

Joint ci ratio: 1.389219e-01	ci left: 2.519378e-04	ci right 2.898742e-04	k: 795	n:2940000
Cons ci ratio: 1.207938e-03	ci left: 7.812859e-01	ci right 7.822305e-01	k: 2298370	n:2940000
KS ci ratio: 2.660971e-01	ci left: 6.399793e-05	ci right 8.394760e-05	k: 216	n:2940000
SLC26A11   2940000 perm   3788 sec   (776 perm/sec)   p_kst 7.346939e-05   p_cons 7.817585e-01   p_joint 2.704082e-04

Joint ci ratio: 1.388347e-01	ci left: 2.514110e-04	ci right 2.892423e-04	k: 796	n:2950000
Cons ci ratio: 1.205924e-03	ci left: 7.812770e-01	ci right 7.822201e-01	k: 2306159	n:2950000
KS ci ratio: 2.654860e-01	ci left: 6.409739e-05	ci right 8.402455e-05	k: 217	n:2950000
SLC26A11   2950000 perm   3812 sec   (774 perm/sec)   p_kst 7.355932e-05   p_cons 7.817488e-01   p_joint 2.698305e-04

Joint ci ratio: 1.386609e-01	ci left: 2.512139e-04	ci right 2.889643e-04	k: 798	n:2960000
Cons ci ratio: 1.203841e-03	ci left: 7.812902e-01	ci right 7.822316e-01	k: 2314013	n:2960000
KS ci ratio: 2.654861e-01	ci left: 6.388084e-05	ci right 8.374069e-05	k: 217	n:2960000
SLC26A11   2960000 perm   3836 sec   (772 perm/sec)   p_kst 7.331081e-05   p_cons 7.817611e-01   p_joint 2.695946e-04

Joint ci ratio: 1.381431e-01	ci left: 2.523183e-04	ci right 2.900814e-04	k: 804	n:2970000
Cons ci ratio: 1.201774e-03	ci left: 7.813019e-01	ci right 7.822417e-01	k: 2321863	n:2970000
KS ci ratio: 2.648792e-01	ci left: 6.398007e-05	ci right 8.381776e-05	k: 218	n:2970000
SLC26A11   2970000 perm   3860 sec   (769 perm/sec)   p_kst 7.340067e-05   p_cons 7.817721e-01   p_joint 2.707071e-04

Joint ci ratio: 1.378864e-01	ci left: 2.524435e-04	ci right 2.901494e-04	k: 807	n:2980000
Cons ci ratio: 1.199782e-03	ci left: 7.812954e-01	ci right 7.822336e-01	k: 2329659	n:2980000
KS ci ratio: 2.642765e-01	ci left: 6.407869e-05	ci right 8.389427e-05	k: 219	n:2980000
SLC26A11   2980000 perm   3884 sec   (767 perm/sec)   p_kst 7.348993e-05   p_cons 7.817648e-01   p_joint 2.708054e-04

Joint ci ratio: 1.376311e-01	ci left: 2.525680e-04	ci right 2.902169e-04	k: 810	n:2990000
Cons ci ratio: 1.197808e-03	ci left: 7.812866e-01	ci right 7.822233e-01	k: 2337448	n:2990000
KS ci ratio: 2.642766e-01	ci left: 6.386438e-05	ci right 8.361369e-05	k: 219	n:2990000
SLC26A11   2990000 perm   3908 sec   (765 perm/sec)   p_kst 7.324415e-05   p_cons 7.817552e-01   p_joint 2.709030e-04

Joint ci ratio: 1.375464e-01	ci left: 2.520480e-04	ci right 2.895943e-04	k: 811	n:3000000
Cons ci ratio: 1.195785e-03	ci left: 7.812945e-01	ci right 7.822296e-01	k: 2345287	n:3000000
KS ci ratio: 2.642766e-01	ci left: 6.365150e-05	ci right 8.333498e-05	k: 219	n:3000000
SLC26A11   3000000 perm   3933 sec   (763 perm/sec)   p_kst 7.300000e-05   p_cons 7.817623e-01   p_joint 2.703333e-04

Joint ci ratio: 1.373773e-01	ci left: 2.518522e-04	ci right 2.893195e-04	k: 813	n:3010000
Cons ci ratio: 1.193779e-03	ci left: 7.813004e-01	ci right 7.822340e-01	k: 2353120	n:3010000
KS ci ratio: 2.636780e-01	ci left: 6.375027e-05	ci right 8.341228e-05	k: 220	n:3010000
SLC26A11   3010000 perm   3957 sec   (761 perm/sec)   p_kst 7.308970e-05   p_cons 7.817674e-01   p_joint 2.700997e-04

Joint ci ratio: 1.372089e-01	ci left: 2.516578e-04	ci right 2.890465e-04	k: 815	n:3020000
Cons ci ratio: 1.191827e-03	ci left: 7.812936e-01	ci right 7.822257e-01	k: 2360915	n:3020000
KS ci ratio: 2.630835e-01	ci left: 6.384845e-05	ci right 8.348901e-05	k: 221	n:3020000
SLC26A11   3020000 perm   3981 sec   (759 perm/sec)   p_kst 7.317881e-05   p_cons 7.817599e-01   p_joint 2.698675e-04

Joint ci ratio: 1.371249e-01	ci left: 2.511459e-04	ci right 2.884339e-04	k: 816	n:3030000
Cons ci ratio: 1.189818e-03	ci left: 7.813061e-01	ci right 7.822366e-01	k: 2368768	n:3030000
KS ci ratio: 2.624929e-01	ci left: 6.394602e-05	ci right 8.356520e-05	k: 222	n:3030000
SLC26A11   3030000 perm   4005 sec   (757 perm/sec)   p_kst 7.326733e-05   p_cons 7.817716e-01   p_joint 2.693069e-04

Joint ci ratio: 1.395376e-01	ci left: 2.414279e-04	ci right 2.779562e-04	k: 788	n:3040000
Cons ci ratio: 1.187833e-03	ci left: 7.813145e-01	ci right 7.822435e-01	k: 2376609	n:3040000
KS ci ratio: 2.624929e-01	ci left: 6.373567e-05	ci right 8.329031e-05	k: 222	n:3040000
SLC26A11   3040000 perm   4030 sec   (754 perm/sec)   p_kst 7.302632e-05   p_cons 7.817793e-01   p_joint 2.592105e-04

Joint ci ratio: 1.393611e-01	ci left: 2.412692e-04	ci right 2.777234e-04	k: 790	n:3050000
Cons ci ratio: 1.185805e-03	ci left: 7.813380e-01	ci right 7.822654e-01	k: 2384496	n:3050000
KS ci ratio: 2.613237e-01	ci left: 6.413939e-05	ci right 8.371592e-05	k: 224	n:3050000
SLC26A11   3050000 perm   4054 sec   (752 perm/sec)   p_kst 7.344262e-05   p_cons 7.818020e-01   p_joint 2.590164e-04

Joint ci ratio: 1.390975e-01	ci left: 2.414270e-04	ci right 2.778304e-04	k: 793	n:3060000
Cons ci ratio: 1.183870e-03	ci left: 7.813375e-01	ci right 7.822633e-01	k: 2392310	n:3060000
KS ci ratio: 2.613237e-01	ci left: 6.392979e-05	ci right 8.344234e-05	k: 224	n:3060000
SLC26A11   3060000 perm   4079 sec   (750 perm/sec)   p_kst 7.320261e-05   p_cons 7.818007e-01   p_joint 2.591503e-04

Joint ci ratio: 1.389227e-01	ci left: 2.412694e-04	ci right 2.775995e-04	k: 795	n:3070000
Cons ci ratio: 1.181992e-03	ci left: 7.813232e-01	ci right 7.822476e-01	k: 2400082	n:3070000
KS ci ratio: 2.607449e-01	ci left: 6.402597e-05	ci right 8.351753e-05	k: 225	n:3070000
SLC26A11   3070000 perm   4104 sec   (748 perm/sec)   p_kst 7.328990e-05   p_cons 7.817857e-01   p_joint 2.589577e-04

Joint ci ratio: 1.387485e-01	ci left: 2.411128e-04	ci right 2.773701e-04	k: 797	n:3080000
Cons ci ratio: 1.180089e-03	ci left: 7.813191e-01	ci right 7.822420e-01	k: 2407885	n:3080000
KS ci ratio: 2.595987e-01	ci left: 6.442510e-05	ci right 8.393797e-05	k: 227	n:3080000
SLC26A11   3080000 perm   4128 sec   (746 perm/sec)   p_kst 7.370130e-05   p_cons 7.817808e-01   p_joint 2.587662e-04

Joint ci ratio: 1.386617e-01	ci left: 2.406449e-04	ci right 2.768073e-04	k: 798	n:3090000
Cons ci ratio: 1.178173e-03	ci left: 7.813212e-01	ci right 7.822426e-01	k: 2415707	n:3090000
KS ci ratio: 2.595987e-01	ci left: 6.421660e-05	ci right 8.366633e-05	k: 227	n:3090000
SLC26A11   3090000 perm   4152 sec   (744 perm/sec)   p_kst 7.346278e-05   p_cons 7.817822e-01   p_joint 2.582524e-04

Joint ci ratio: 1.385750e-01	ci left: 2.401800e-04	ci right 2.762481e-04	k: 799	n:3100000
Cons ci ratio: 1.176327e-03	ci left: 7.813059e-01	ci right 7.822258e-01	k: 2423475	n:3100000
KS ci ratio: 2.595988e-01	ci left: 6.400945e-05	ci right 8.339644e-05	k: 227	n:3100000
SLC26A11   3100000 perm   4177 sec   (742 perm/sec)   p_kst 7.322581e-05   p_cons 7.817661e-01   p_joint 2.577419e-04

Joint ci ratio: 1.384021e-01	ci left: 2.400285e-04	ci right 2.760252e-04	k: 801	n:3110000
Cons ci ratio: 1.174422e-03	ci left: 7.813100e-01	ci right 7.822284e-01	k: 2431303	n:3110000
KS ci ratio: 2.595988e-01	ci left: 6.380363e-05	ci right 8.312829e-05	k: 227	n:3110000
SLC26A11   3110000 perm   4202 sec   (740 perm/sec)   p_kst 7.299035e-05   p_cons 7.817695e-01   p_joint 2.575563e-04

Joint ci ratio: 1.380583e-01	ci left: 2.404969e-04	ci right 2.764669e-04	k: 805	n:3120000
Cons ci ratio: 1.172518e-03	ci left: 7.813169e-01	ci right 7.822339e-01	k: 2439140	n:3120000
KS ci ratio: 2.595988e-01	ci left: 6.359913e-05	ci right 8.286185e-05	k: 227	n:3120000
SLC26A11   3120000 perm   4228 sec   (738 perm/sec)   p_kst 7.275641e-05   p_cons 7.817756e-01   p_joint 2.580128e-04

Joint ci ratio: 1.379727e-01	ci left: 2.400370e-04	ci right 2.759141e-04	k: 806	n:3130000
Cons ci ratio: 1.170694e-03	ci left: 7.813027e-01	ci right 7.822182e-01	k: 2446911	n:3130000
KS ci ratio: 2.595988e-01	ci left: 6.339594e-05	ci right 8.259712e-05	k: 227	n:3130000
SLC26A11   3130000 perm   4253 sec   (736 perm/sec)   p_kst 7.252396e-05   p_cons 7.817607e-01   p_joint 2.575080e-04

Joint ci ratio: 1.375472e-01	ci left: 2.408101e-04	ci right 2.766826e-04	k: 811	n:3140000
Cons ci ratio: 1.168821e-03	ci left: 7.813058e-01	ci right 7.822198e-01	k: 2454736	n:3140000
KS ci ratio: 2.584676e-01	ci left: 6.378964e-05	ci right 8.301227e-05	k: 229	n:3140000
SLC26A11   3140000 perm   4278 sec   (734 perm/sec)   p_kst 7.292994e-05   p_cons 7.817631e-01   p_joint 2.582803e-04

Joint ci ratio: 1.372097e-01	ci left: 2.412718e-04	ci right 2.771177e-04	k: 815	n:3150000
Cons ci ratio: 1.166955e-03	ci left: 7.813092e-01	ci right 7.822217e-01	k: 2462562	n:3150000
KS ci ratio: 2.573511e-01	ci left: 6.418101e-05	ci right 8.342461e-05	k: 231	n:3150000
SLC26A11   3150000 perm   4303 sec   (732 perm/sec)   p_kst 7.333333e-05   p_cons 7.817657e-01   p_joint 2.587302e-04

Joint ci ratio: 1.369581e-01	ci left: 2.414251e-04	ci right 2.772227e-04	k: 818	n:3160000
Cons ci ratio: 1.165126e-03	ci left: 7.813043e-01	ci right 7.822154e-01	k: 2470362	n:3160000
KS ci ratio: 2.562489e-01	ci left: 6.457008e-05	ci right 8.383417e-05	k: 233	n:3160000
SLC26A11   3160000 perm   4328 sec   (730 perm/sec)   p_kst 7.373418e-05   p_cons 7.817601e-01   p_joint 2.588608e-04

Joint ci ratio: 1.367080e-01	ci left: 2.415775e-04	ci right 2.773269e-04	k: 821	n:3170000
Cons ci ratio: 1.163251e-03	ci left: 7.813156e-01	ci right 7.822253e-01	k: 2478213	n:3170000
KS ci ratio: 2.562489e-01	ci left: 6.436639e-05	ci right 8.356971e-05	k: 233	n:3170000
SLC26A11   3170000 perm   4353 sec   (728 perm/sec)   p_kst 7.350158e-05   p_cons 7.817707e-01   p_joint 2.589905e-04

Joint ci ratio: 1.364592e-01	ci left: 2.417290e-04	ci right 2.774304e-04	k: 824	n:3180000
Cons ci ratio: 1.161438e-03	ci left: 7.813110e-01	ci right 7.822193e-01	k: 2486014	n:3180000
KS ci ratio: 2.557031e-01	ci left: 6.445827e-05	ci right 8.364151e-05	k: 234	n:3180000
SLC26A11   3180000 perm   4378 sec   (726 perm/sec)   p_kst 7.358491e-05   p_cons 7.817654e-01   p_joint 2.591195e-04

Joint ci ratio: 1.364592e-01	ci left: 2.409712e-04	ci right 2.765607e-04	k: 824	n:3190000
Cons ci ratio: 1.159565e-03	ci left: 7.813269e-01	ci right 7.822337e-01	k: 2493880	n:3190000
KS ci ratio: 2.557031e-01	ci left: 6.425621e-05	ci right 8.337931e-05	k: 234	n:3190000
SLC26A11   3190000 perm   4403 sec   (724 perm/sec)   p_kst 7.335423e-05   p_cons 7.817806e-01   p_joint 2.583072e-04

Joint ci ratio: 1.375476e-01	ci left: 2.362948e-04	ci right 2.714949e-04	k: 811	n:3200000
Cons ci ratio: 1.157855e-03	ci left: 7.812970e-01	ci right 7.822025e-01	k: 2501600	n:3200000
KS ci ratio: 2.551608e-01	ci left: 6.434790e-05	ci right 8.345121e-05	k: 235	n:3200000
SLC26A11   3200000 perm   4428 sec   (723 perm/sec)   p_kst 7.343750e-05   p_cons 7.817500e-01   p_joint 2.534375e-04

Joint ci ratio: 1.372942e-01	ci left: 2.364612e-04	ci right 2.716158e-04	k: 814	n:3210000
Cons ci ratio: 1.156036e-03	ci left: 7.813019e-01	ci right 7.822060e-01	k: 2509431	n:3210000
KS ci ratio: 2.546219e-01	ci left: 6.443907e-05	ci right 8.352262e-05	k: 236	n:3210000
SLC26A11   3210000 perm   4454 sec   (721 perm/sec)   p_kst 7.352025e-05   p_cons 7.817542e-01   p_joint 2.535826e-04

Joint ci ratio: 1.371260e-01	ci left: 2.363266e-04	ci right 2.714147e-04	k: 816	n:3220000
Cons ci ratio: 1.154202e-03	ci left: 7.813137e-01	ci right 7.822163e-01	k: 2517284	n:3220000
KS ci ratio: 2.540864e-01	ci left: 6.452971e-05	ci right 8.359355e-05	k: 237	n:3220000
SLC26A11   3220000 perm   4480 sec   (719 perm/sec)   p_kst 7.360248e-05   p_cons 7.817652e-01   p_joint 2.534161e-04

Joint ci ratio: 1.386625e-01	ci left: 2.302144e-04	ci right 2.648096e-04	k: 798	n:3230000
Cons ci ratio: 1.152362e-03	ci left: 7.813300e-01	ci right 7.822311e-01	k: 2525152	n:3230000
KS ci ratio: 2.530255e-01	ci left: 6.490978e-05	ci right 8.399321e-05	k: 239	n:3230000
SLC26A11   3230000 perm   4506 sec   (717 perm/sec)   p_kst 7.399381e-05   p_cons 7.817808e-01   p_joint 2.470588e-04

Joint ci ratio: 1.385758e-01	ci left: 2.298018e-04	ci right 2.643116e-04	k: 799	n:3240000
Cons ci ratio: 1.150573e-03	ci left: 7.813332e-01	ci right 7.822330e-01	k: 2532978	n:3240000
KS ci ratio: 2.530255e-01	ci left: 6.470944e-05	ci right 8.373397e-05	k: 239	n:3240000
SLC26A11   3240000 perm   4532 sec   (715 perm/sec)   p_kst 7.376543e-05   p_cons 7.817833e-01   p_joint 2.466049e-04

Joint ci ratio: 1.384029e-01	ci left: 2.296888e-04	ci right 2.641350e-04	k: 801	n:3250000
Cons ci ratio: 1.148795e-03	ci left: 7.813361e-01	ci right 7.822345e-01	k: 2540803	n:3250000
KS ci ratio: 2.530255e-01	ci left: 6.451033e-05	ci right 8.347633e-05	k: 239	n:3250000
SLC26A11   3250000 perm   4557 sec   (713 perm/sec)   p_kst 7.353846e-05   p_cons 7.817855e-01   p_joint 2.464615e-04

Joint ci ratio: 1.404318e-01	ci left: 2.221750e-04	ci right 2.560237e-04	k: 778	n:3260000
Cons ci ratio: 1.147060e-03	ci left: 7.813282e-01	ci right 7.822253e-01	k: 2548593	n:3260000
KS ci ratio: 2.530256e-01	ci left: 6.431245e-05	ci right 8.322027e-05	k: 239	n:3260000
SLC26A11   3260000 perm   4583 sec   (711 perm/sec)   p_kst 7.331288e-05   p_cons 7.817770e-01   p_joint 2.386503e-04

Joint ci ratio: 1.401621e-01	ci left: 2.223808e-04	ci right 2.561904e-04	k: 781	n:3270000
Cons ci ratio: 1.145411e-03	ci left: 7.812972e-01	ci right 7.821929e-01	k: 2556307	n:3270000
KS ci ratio: 2.514587e-01	ci left: 6.497522e-05	ci right 8.394107e-05	k: 242	n:3270000
SLC26A11   3270000 perm   4609 sec   (710 perm/sec)   p_kst 7.400612e-05   p_cons 7.817453e-01   p_joint 2.388379e-04

Joint ci ratio: 1.400726e-01	ci left: 2.219970e-04	ci right 2.557249e-04	k: 782	n:3280000
Cons ci ratio: 1.143649e-03	ci left: 7.813023e-01	ci right 7.821966e-01	k: 2564139	n:3280000
KS ci ratio: 2.514588e-01	ci left: 6.477712e-05	ci right 8.368515e-05	k: 242	n:3280000
SLC26A11   3280000 perm   4635 sec   (708 perm/sec)   p_kst 7.378049e-05   p_cons 7.817497e-01   p_joint 2.384146e-04

Joint ci ratio: 1.398050e-01	ci left: 2.222022e-04	ci right 2.558914e-04	k: 785	n:3290000
Cons ci ratio: 1.141887e-03	ci left: 7.813098e-01	ci right 7.822028e-01	k: 2571979	n:3290000
KS ci ratio: 2.509429e-01	ci left: 6.486505e-05	ci right 8.375384e-05	k: 243	n:3290000
SLC26A11   3290000 perm   4661 sec   (706 perm/sec)   p_kst 7.386018e-05   p_cons 7.817565e-01   p_joint 2.386018e-04

Joint ci ratio: 1.326543e-01	ci left: 2.469948e-04	ci right 2.823767e-04	k: 872	n:3300000
Cons ci ratio: 1.140131e-03	ci left: 7.813176e-01	ci right 7.822092e-01	k: 2579820	n:3300000
KS ci ratio: 2.499207e-01	ci left: 6.523652e-05	ci right 8.414405e-05	k: 245	n:3300000
SLC26A11   3300000 perm   4687 sec   (704 perm/sec)   p_kst 7.424242e-05   p_cons 7.817636e-01   p_joint 2.642424e-04

Joint ci ratio: 1.325785e-01	ci left: 2.465407e-04	ci right 2.818357e-04	k: 873	n:3310000
Cons ci ratio: 1.138460e-03	ci left: 7.813027e-01	ci right 7.821929e-01	k: 2587586	n:3310000
KS ci ratio: 2.499207e-01	ci left: 6.503943e-05	ci right 8.388984e-05	k: 245	n:3310000
SLC26A11   3310000 perm   4726 sec   (700 perm/sec)   p_kst 7.401813e-05   p_cons 7.817480e-01   p_joint 2.637462e-04

Joint ci ratio: 1.324270e-01	ci left: 2.463805e-04	ci right 2.816092e-04	k: 875	n:3320000
Cons ci ratio: 1.136727e-03	ci left: 7.813086e-01	ci right 7.821975e-01	k: 2595421	n:3320000
KS ci ratio: 2.499208e-01	ci left: 6.484352e-05	ci right 8.363717e-05	k: 245	n:3320000
SLC26A11   3320000 perm   4753 sec   (699 perm/sec)   p_kst 7.379518e-05   p_cons 7.817533e-01   p_joint 2.635542e-04

Joint ci ratio: 1.322761e-01	ci left: 2.462213e-04	ci right 2.813840e-04	k: 877	n:3330000
Cons ci ratio: 1.134991e-03	ci left: 7.813175e-01	ci right 7.822051e-01	k: 2603266	n:3330000
KS ci ratio: 2.494143e-01	ci left: 6.493031e-05	ci right 8.370505e-05	k: 246	n:3330000
SLC26A11   3330000 perm   4779 sec   (697 perm/sec)   p_kst 7.387387e-05   p_cons 7.817616e-01   p_joint 2.633634e-04

Joint ci ratio: 1.348350e-01	ci left: 2.359339e-04	ci right 2.703315e-04	k: 844	n:3340000
Cons ci ratio: 1.133297e-03	ci left: 7.813162e-01	ci right 7.822025e-01	k: 2611077	n:3340000
KS ci ratio: 2.494144e-01	ci left: 6.473591e-05	ci right 8.345444e-05	k: 246	n:3340000
SLC26A11   3340000 perm   4806 sec   (695 perm/sec)   p_kst 7.365269e-05   p_cons 7.817596e-01   p_joint 2.526946e-04

Joint ci ratio: 1.348351e-01	ci left: 2.352296e-04	ci right 2.695245e-04	k: 844	n:3350000
Cons ci ratio: 1.131556e-03	ci left: 7.813316e-01	ci right 7.822165e-01	k: 2618944	n:3350000
KS ci ratio: 2.494144e-01	ci left: 6.454266e-05	ci right 8.320532e-05	k: 246	n:3350000
SLC26A11   3350000 perm   4833 sec   (693 perm/sec)   p_kst 7.343284e-05   p_cons 7.817743e-01   p_joint 2.519403e-04

Joint ci ratio: 1.346758e-01	ci left: 2.351047e-04	ci right 2.693377e-04	k: 846	n:3360000
Cons ci ratio: 1.129882e-03	ci left: 7.813288e-01	ci right 7.822124e-01	k: 2626750	n:3360000
KS ci ratio: 2.494144e-01	ci left: 6.435057e-05	ci right 8.295769e-05	k: 246	n:3360000
SLC26A11   3360000 perm   4860 sec   (691 perm/sec)   p_kst 7.321429e-05   p_cons 7.817708e-01   p_joint 2.517857e-04

Joint ci ratio: 1.345964e-01	ci left: 2.346938e-04	ci right 2.688452e-04	k: 847	n:3370000
Cons ci ratio: 1.128194e-03	ci left: 7.813325e-01	ci right 7.822148e-01	k: 2634578	n:3370000
KS ci ratio: 2.494144e-01	ci left: 6.415962e-05	ci right 8.271153e-05	k: 246	n:3370000
SLC26A11   3370000 perm   4887 sec   (690 perm/sec)   p_kst 7.299703e-05   p_cons 7.817739e-01   p_joint 2.513353e-04

Joint ci ratio: 1.344380e-01	ci left: 2.345712e-04	ci right 2.686614e-04	k: 849	n:3380000
Cons ci ratio: 1.126515e-03	ci left: 7.813359e-01	ci right 7.822169e-01	k: 2642405	n:3380000
KS ci ratio: 2.489111e-01	ci left: 6.424718e-05	ci right 8.278111e-05	k: 247	n:3380000
SLC26A11   3380000 perm   4915 sec   (688 perm/sec)   p_kst 7.307692e-05   p_cons 7.817766e-01   p_joint 2.511834e-04

Joint ci ratio: 1.340442e-01	ci left: 2.353047e-04	ci right 2.693933e-04	k: 854	n:3390000
Cons ci ratio: 1.124769e-03	ci left: 7.813617e-01	ci right 7.822413e-01	k: 2650308	n:3390000
KS ci ratio: 2.484107e-01	ci left: 6.433427e-05	ci right 8.285025e-05	k: 248	n:3390000
SLC26A11   3390000 perm   4942 sec   (686 perm/sec)   p_kst 7.315634e-05   p_cons 7.818018e-01   p_joint 2.519174e-04

Joint ci ratio: 1.337318e-01	ci left: 2.357497e-04	ci right 2.698168e-04	k: 858	n:3400000
Cons ci ratio: 1.123174e-03	ci left: 7.813441e-01	ci right 7.822225e-01	k: 2658064	n:3400000
KS ci ratio: 2.484108e-01	ci left: 6.414505e-05	ci right 8.260657e-05	k: 248	n:3400000
SLC26A11   3400000 perm   4969 sec   (684 perm/sec)   p_kst 7.294118e-05   p_cons 7.817835e-01   p_joint 2.523529e-04

Joint ci ratio: 1.331901e-01	ci left: 2.370426e-04	ci right 2.711468e-04	k: 865	n:3410000
Cons ci ratio: 1.121482e-03	ci left: 7.813583e-01	ci right 7.822354e-01	k: 2665928	n:3410000
KS ci ratio: 2.469276e-01	ci left: 6.478211e-05	ci right 8.329858e-05	k: 251	n:3410000
SLC26A11   3410000 perm   4996 sec   (683 perm/sec)   p_kst 7.360704e-05   p_cons 7.817971e-01   p_joint 2.536657e-04

Joint ci ratio: 1.330366e-01	ci left: 2.369148e-04	ci right 2.709583e-04	k: 867	n:3420000
Cons ci ratio: 1.119823e-03	ci left: 7.813645e-01	ci right 7.822403e-01	k: 2673765	n:3420000
KS ci ratio: 2.464391e-01	ci left: 6.486701e-05	ci right 8.336545e-05	k: 252	n:3420000
SLC26A11   3420000 perm   5024 sec   (681 perm/sec)   p_kst 7.368421e-05   p_cons 7.818026e-01   p_joint 2.535088e-04

Joint ci ratio: 1.328836e-01	ci left: 2.367878e-04	ci right 2.707708e-04	k: 869	n:3430000
Cons ci ratio: 1.118202e-03	ci left: 7.813611e-01	ci right 7.822355e-01	k: 2681569	n:3430000
KS ci ratio: 2.459535e-01	ci left: 6.495146e-05	ci right 8.343190e-05	k: 253	n:3430000
SLC26A11   3430000 perm   5051 sec   (679 perm/sec)   p_kst 7.376093e-05   p_cons 7.817985e-01   p_joint 2.533528e-04

Joint ci ratio: 1.328073e-01	ci left: 2.363805e-04	ci right 2.702840e-04	k: 870	n:3440000
Cons ci ratio: 1.116587e-03	ci left: 7.813582e-01	ci right 7.822314e-01	k: 2689375	n:3440000
KS ci ratio: 2.454708e-01	ci left: 6.503545e-05	ci right 8.349792e-05	k: 254	n:3440000
SLC26A11   3440000 perm   5079 sec   (677 perm/sec)   p_kst 7.383721e-05   p_cons 7.817951e-01   p_joint 2.529070e-04

Joint ci ratio: 1.326551e-01	ci left: 2.362558e-04	ci right 2.700995e-04	k: 872	n:3450000
Cons ci ratio: 1.115010e-03	ci left: 7.813458e-01	ci right 7.822178e-01	k: 2697148	n:3450000
KS ci ratio: 2.449909e-01	ci left: 6.511898e-05	ci right 8.356353e-05	k: 255	n:3450000
SLC26A11   3450000 perm   5106 sec   (676 perm/sec)   p_kst 7.391304e-05   p_cons 7.817820e-01   p_joint 2.527536e-04

Joint ci ratio: 1.322015e-01	ci left: 2.372496e-04	ci right 2.711104e-04	k: 878	n:3460000
Cons ci ratio: 1.113354e-03	ci left: 7.813598e-01	ci right 7.822305e-01	k: 2705012	n:3460000
KS ci ratio: 2.435678e-01	ci left: 6.574476e-05	ci right 8.424203e-05	k: 258	n:3460000
SLC26A11   3460000 perm   5133 sec   (674 perm/sec)   p_kst 7.456647e-05   p_cons 7.817954e-01   p_joint 2.537572e-04

Joint ci ratio: 1.337321e-01	ci left: 2.309939e-04	ci right 2.643739e-04	k: 858	n:3470000
Cons ci ratio: 1.111677e-03	ci left: 7.813826e-01	ci right 7.822520e-01	k: 2712907	n:3470000
KS ci ratio: 2.430989e-01	ci left: 6.582591e-05	ci right 8.430498e-05	k: 259	n:3470000
SLC26A11   3470000 perm   5161 sec   (672 perm/sec)   p_kst 7.463977e-05   p_cons 7.818176e-01   p_joint 2.472622e-04

Joint ci ratio: 1.334992e-01	ci left: 2.311634e-04	ci right 2.645050e-04	k: 861	n:3480000
Cons ci ratio: 1.110090e-03	ci left: 7.813798e-01	ci right 7.822479e-01	k: 2720713	n:3480000
KS ci ratio: 2.426328e-01	ci left: 6.590662e-05	ci right 8.436754e-05	k: 260	n:3480000
SLC26A11   3480000 perm   5188 sec   (671 perm/sec)   p_kst 7.471264e-05   p_cons 7.818141e-01   p_joint 2.474138e-04

Joint ci ratio: 1.333446e-01	ci left: 2.310549e-04	ci right 2.643393e-04	k: 863	n:3490000
Cons ci ratio: 1.108539e-03	ci left: 7.813677e-01	ci right 7.822347e-01	k: 2728487	n:3490000
KS ci ratio: 2.426328e-01	ci left: 6.571778e-05	ci right 8.412580e-05	k: 260	n:3490000
SLC26A11   3490000 perm   5217 sec   (669 perm/sec)   p_kst 7.449857e-05   p_cons 7.818014e-01   p_joint 2.472779e-04

Joint ci ratio: 1.331905e-01	ci left: 2.309472e-04	ci right 2.641746e-04	k: 865	n:3500000
Cons ci ratio: 1.106925e-03	ci left: 7.813775e-01	ci right 7.822432e-01	k: 2736337	n:3500000
KS ci ratio: 2.421693e-01	ci left: 6.579838e-05	ci right 8.418847e-05	k: 261	n:3500000
SLC26A11   3500000 perm   5245 sec   (667 perm/sec)   p_kst 7.457143e-05   p_cons 7.818106e-01   p_joint 2.471429e-04

Joint ci ratio: 1.328840e-01	ci left: 2.313909e-04	ci right 2.645994e-04	k: 869	n:3510000
Cons ci ratio: 1.105377e-03	ci left: 7.813687e-01	ci right 7.822331e-01	k: 2744122	n:3510000
KS ci ratio: 2.421693e-01	ci left: 6.561092e-05	ci right 8.394862e-05	k: 261	n:3510000
SLC26A11   3510000 perm   5272 sec   (666 perm/sec)   p_kst 7.435897e-05   p_cons 7.818011e-01   p_joint 2.475783e-04

Joint ci ratio: 1.327315e-01	ci left: 2.312828e-04	ci right 2.644348e-04	k: 871	n:3520000
Cons ci ratio: 1.103799e-03	ci left: 7.813716e-01	ci right 7.822348e-01	k: 2751948	n:3520000
KS ci ratio: 2.417085e-01	ci left: 6.569139e-05	ci right 8.401141e-05	k: 262	n:3520000
SLC26A11   3520000 perm   5301 sec   (664 perm/sec)   p_kst 7.443182e-05   p_cons 7.818034e-01   p_joint 2.474432e-04

Joint ci ratio: 1.325795e-01	ci left: 2.311754e-04	ci right 2.642710e-04	k: 873	n:3530000
Cons ci ratio: 1.102189e-03	ci left: 7.813863e-01	ci right 7.822483e-01	k: 2759816	n:3530000
KS ci ratio: 2.412503e-01	ci left: 6.577144e-05	ci right 8.407381e-05	k: 263	n:3530000
SLC26A11   3530000 perm   5329 sec   (662 perm/sec)   p_kst 7.450425e-05   p_cons 7.818176e-01   p_joint 2.473088e-04

Joint ci ratio: 1.321267e-01	ci left: 2.321612e-04	ci right 2.652755e-04	k: 879	n:3540000
Cons ci ratio: 1.100634e-03	ci left: 7.813861e-01	ci right 7.822468e-01	k: 2767631	n:3540000
KS ci ratio: 2.403416e-01	ci left: 6.611654e-05	ci right 8.443530e-05	k: 265	n:3540000
SLC26A11   3540000 perm   5357 sec   (661 perm/sec)   p_kst 7.485876e-05   p_cons 7.818167e-01   p_joint 2.483051e-04

Joint ci ratio: 1.317529e-01	ci left: 2.328692e-04	ci right 2.659831e-04	k: 884	n:3550000
Cons ci ratio: 1.099120e-03	ci left: 7.813751e-01	ci right 7.822346e-01	k: 2775408	n:3550000
KS ci ratio: 2.394430e-01	ci left: 6.645981e-05	ci right 8.479463e-05	k: 267	n:3550000
SLC26A11   3550000 perm   5385 sec   (659 perm/sec)   p_kst 7.521127e-05   p_cons 7.818051e-01   p_joint 2.490141e-04

Joint ci ratio: 1.316786e-01	ci left: 2.324867e-04	ci right 2.655262e-04	k: 885	n:3560000
Cons ci ratio: 1.097544e-03	ci left: 7.813852e-01	ci right 7.822435e-01	k: 2783260	n:3560000
KS ci ratio: 2.394431e-01	ci left: 6.627313e-05	ci right 8.455645e-05	k: 267	n:3560000
SLC26A11   3560000 perm   5413 sec   (658 perm/sec)   p_kst 7.500000e-05   p_cons 7.818146e-01   p_joint 2.485955e-04

Joint ci ratio: 1.314562e-01	ci left: 2.326481e-04	ci right 2.656504e-04	k: 888	n:3570000
Cons ci ratio: 1.096059e-03	ci left: 7.813692e-01	ci right 7.822264e-01	k: 2791019	n:3570000
KS ci ratio: 2.389976e-01	ci left: 6.635081e-05	ci right 8.461646e-05	k: 268	n:3570000
SLC26A11   3570000 perm   5440 sec   (656 perm/sec)   p_kst 7.507003e-05   p_cons 7.817980e-01   p_joint 2.487395e-04

Joint ci ratio: 1.311614e-01	ci left: 2.330789e-04	ci right 2.660623e-04	k: 892	n:3580000
Cons ci ratio: 1.094553e-03	ci left: 7.813617e-01	ci right 7.822177e-01	k: 2798808	n:3580000
KS ci ratio: 2.381140e-01	ci left: 6.669075e-05	ci right 8.497209e-05	k: 270	n:3580000
SLC26A11   3580000 perm   5469 sec   (655 perm/sec)   p_kst 7.541899e-05   p_cons 7.817899e-01   p_joint 2.491620e-04

Joint ci ratio: 1.309416e-01	ci left: 2.332379e-04	ci right 2.661842e-04	k: 895	n:3590000
Cons ci ratio: 1.093092e-03	ci left: 7.813423e-01	ci right 7.821971e-01	k: 2806554	n:3590000
KS ci ratio: 2.381140e-01	ci left: 6.650498e-05	ci right 8.473540e-05	k: 270	n:3590000
SLC26A11   3590000 perm   5496 sec   (653 perm/sec)   p_kst 7.520891e-05   p_cons 7.817699e-01   p_joint 2.493036e-04

Joint ci ratio: 1.307230e-01	ci left: 2.333961e-04	ci right 2.663054e-04	k: 898	n:3600000
Cons ci ratio: 1.091501e-03	ci left: 7.813652e-01	ci right 7.822188e-01	k: 2814452	n:3600000
KS ci ratio: 2.376759e-01	ci left: 6.658146e-05	ci right 8.479433e-05	k: 271	n:3600000
SLC26A11   3600000 perm   5525 sec   (652 perm/sec)   p_kst 7.527778e-05   p_cons 7.817922e-01   p_joint 2.494444e-04

Joint ci ratio: 1.265666e-01	ci left: 2.488354e-04	ci right 2.827225e-04	k: 958	n:3610000
Cons ci ratio: 1.089992e-03	ci left: 7.813647e-01	ci right 7.822171e-01	k: 2822266	n:3610000
KS ci ratio: 2.363759e-01	ci left: 6.717871e-05	ci right 8.543972e-05	k: 274	n:3610000
SLC26A11   3610000 perm   5553 sec   (650 perm/sec)   p_kst 7.590028e-05   p_cons 7.817911e-01   p_joint 2.653740e-04

Joint ci ratio: 1.265007e-01	ci left: 2.484156e-04	ci right 2.822265e-04	k: 959	n:3620000
Cons ci ratio: 1.088492e-03	ci left: 7.813631e-01	ci right 7.822143e-01	k: 2830076	n:3620000
KS ci ratio: 2.363759e-01	ci left: 6.699313e-05	ci right 8.520370e-05	k: 274	n:3620000
SLC26A11   3620000 perm   5582 sec   (649 perm/sec)   p_kst 7.569061e-05   p_cons 7.817890e-01   p_joint 2.649171e-04

Joint ci ratio: 1.263691e-01	ci left: 2.482648e-04	ci right 2.820174e-04	k: 961	n:3630000
Cons ci ratio: 1.086996e-03	ci left: 7.813623e-01	ci right 7.822124e-01	k: 2837889	n:3630000
KS ci ratio: 2.363759e-01	ci left: 6.680857e-05	ci right 8.496898e-05	k: 274	n:3630000
SLC26A11   3630000 perm   5610 sec   (647 perm/sec)   p_kst 7.548209e-05   p_cons 7.817876e-01   p_joint 2.647383e-04

Joint ci ratio: 1.261072e-01	ci left: 2.486469e-04	ci right 2.823762e-04	k: 965	n:3640000
Cons ci ratio: 1.085468e-03	ci left: 7.813737e-01	ci right 7.822226e-01	k: 2845746	n:3640000
KS ci ratio: 2.355210e-01	ci left: 6.714201e-05	ci right 8.531742e-05	k: 276	n:3640000
SLC26A11   3640000 perm   5639 sec   (646 perm/sec)   p_kst 7.582418e-05   p_cons 7.817984e-01   p_joint 2.651099e-04

Joint ci ratio: 1.259768e-01	ci left: 2.484964e-04	ci right 2.821678e-04	k: 967	n:3650000
Cons ci ratio: 1.083986e-03	ci left: 7.813724e-01	ci right 7.822201e-01	k: 2853557	n:3650000
KS ci ratio: 2.350970e-01	ci left: 6.721588e-05	ci right 8.537377e-05	k: 277	n:3650000
SLC26A11   3650000 perm   5668 sec   (644 perm/sec)   p_kst 7.589041e-05   p_cons 7.817964e-01   p_joint 2.649315e-04

Joint ci ratio: 1.257173e-01	ci left: 2.488759e-04	ci right 2.825241e-04	k: 971	n:3660000
Cons ci ratio: 1.082533e-03	ci left: 7.813639e-01	ci right 7.822105e-01	k: 2861342	n:3660000
KS ci ratio: 2.338386e-01	ci left: 6.780376e-05	ci right 8.600824e-05	k: 280	n:3660000
SLC26A11   3660000 perm   5696 sec   (643 perm/sec)   p_kst 7.650273e-05   p_cons 7.817874e-01   p_joint 2.653005e-04

Joint ci ratio: 1.256528e-01	ci left: 2.484617e-04	ci right 2.820353e-04	k: 972	n:3670000
Cons ci ratio: 1.081075e-03	ci left: 7.813588e-01	ci right 7.822042e-01	k: 2869139	n:3670000
KS ci ratio: 2.338386e-01	ci left: 6.761901e-05	ci right 8.577388e-05	k: 280	n:3670000
SLC26A11   3670000 perm   5725 sec   (641 perm/sec)   p_kst 7.629428e-05   p_cons 7.817817e-01   p_joint 2.648501e-04

Joint ci ratio: 1.253311e-01	ci left: 2.491025e-04	ci right 2.826703e-04	k: 977	n:3680000
Cons ci ratio: 1.079546e-03	ci left: 7.813782e-01	ci right 7.822224e-01	k: 2877026	n:3680000
KS ci ratio: 2.334236e-01	ci left: 6.769109e-05	ci right 8.582842e-05	k: 281	n:3680000
SLC26A11   3680000 perm   5755 sec   (639 perm/sec)   p_kst 7.635870e-05   p_cons 7.818005e-01   p_joint 2.654891e-04

Joint ci ratio: 1.251393e-01	ci left: 2.492150e-04	ci right 2.827427e-04	k: 980	n:3690000
Cons ci ratio: 1.078090e-03	ci left: 7.813763e-01	ci right 7.822194e-01	k: 2884835	n:3690000
KS ci ratio: 2.330108e-01	ci left: 6.776282e-05	ci right 8.588263e-05	k: 282	n:3690000
SLC26A11   3690000 perm   5784 sec   (638 perm/sec)   p_kst 7.642276e-05   p_cons 7.817981e-01   p_joint 2.655827e-04

Joint ci ratio: 1.248849e-01	ci left: 2.495887e-04	ci right 2.830934e-04	k: 984	n:3700000
Cons ci ratio: 1.076654e-03	ci left: 7.813699e-01	ci right 7.822118e-01	k: 2892627	n:3700000
KS ci ratio: 2.317855e-01	ci left: 6.834329e-05	ci right 8.650844e-05	k: 285	n:3700000
SLC26A11   3700000 perm   5814 sec   (636 perm/sec)   p_kst 7.702703e-05   p_cons 7.817911e-01   p_joint 2.659459e-04

Joint ci ratio: 1.246321e-01	ci left: 2.499605e-04	ci right 2.834421e-04	k: 988	n:3710000
Cons ci ratio: 1.075269e-03	ci left: 7.813492e-01	ci right 7.821900e-01	k: 2900366	n:3710000
KS ci ratio: 2.309792e-01	ci left: 6.866691e-05	ci right 8.684554e-05	k: 287	n:3710000
SLC26A11   3710000 perm   5843 sec   (635 perm/sec)   p_kst 7.735849e-05   p_cons 7.817698e-01   p_joint 2.663073e-04

Joint ci ratio: 1.242557e-01	ci left: 2.508513e-04	ci right 2.843433e-04	k: 994	n:3720000
Cons ci ratio: 1.073835e-03	ci left: 7.813458e-01	ci right 7.821855e-01	k: 2908169	n:3720000
KS ci ratio: 2.305792e-01	ci left: 6.873560e-05	ci right 8.689642e-05	k: 288	n:3720000
SLC26A11   3720000 perm   5872 sec   (634 perm/sec)   p_kst 7.741935e-05   p_cons 7.817659e-01   p_joint 2.672043e-04

Joint ci ratio: 1.248851e-01	ci left: 2.475813e-04	ci right 2.808165e-04	k: 984	n:3730000
Cons ci ratio: 1.072395e-03	ci left: 7.813462e-01	ci right 7.821848e-01	k: 2915986	n:3730000
KS ci ratio: 2.305793e-01	ci left: 6.855132e-05	ci right 8.666345e-05	k: 288	n:3730000
SLC26A11   3730000 perm   5901 sec   (632 perm/sec)   p_kst 7.721180e-05   p_cons 7.817657e-01   p_joint 2.638070e-04

Joint ci ratio: 1.247585e-01	ci left: 2.474374e-04	ci right 2.806171e-04	k: 986	n:3740000
Cons ci ratio: 1.070933e-03	ci left: 7.813556e-01	ci right 7.821931e-01	k: 2923837	n:3740000
KS ci ratio: 2.305793e-01	ci left: 6.836803e-05	ci right 8.643173e-05	k: 288	n:3740000
SLC26A11   3740000 perm   5931 sec   (631 perm/sec)   p_kst 7.700535e-05   p_cons 7.817746e-01   p_joint 2.636364e-04

Joint ci ratio: 1.245693e-01	ci left: 2.475526e-04	ci right 2.806937e-04	k: 989	n:3750000
Cons ci ratio: 1.069443e-03	ci left: 7.813757e-01	ci right 7.822121e-01	k: 2931728	n:3750000
KS ci ratio: 2.305793e-01	ci left: 6.818571e-05	ci right 8.620125e-05	k: 288	n:3750000
SLC26A11   3750000 perm   5960 sec   (629 perm/sec)   p_kst 7.680000e-05   p_cons 7.817941e-01   p_joint 2.637333e-04

Joint ci ratio: 1.244437e-01	ci left: 2.474096e-04	ci right 2.804957e-04	k: 991	n:3760000
Cons ci ratio: 1.068079e-03	ci left: 7.813572e-01	ci right 7.821924e-01	k: 2939474	n:3760000
KS ci ratio: 2.301814e-01	ci left: 6.825498e-05	ci right 8.625327e-05	k: 289	n:3760000
SLC26A11   3760000 perm   5990 sec   (628 perm/sec)   p_kst 7.686170e-05   p_cons 7.817750e-01   p_joint 2.635638e-04

Joint ci ratio: 1.242559e-01	ci left: 2.475243e-04	ci right 2.805722e-04	k: 994	n:3770000
Cons ci ratio: 1.066625e-03	ci left: 7.813695e-01	ci right 7.822036e-01	k: 2947336	n:3770000
KS ci ratio: 2.293917e-01	ci left: 6.857390e-05	ci right 8.658547e-05	k: 291	n:3770000
SLC26A11   3770000 perm   6020 sec   (626 perm/sec)   p_kst 7.718833e-05   p_cons 7.817867e-01   p_joint 2.636605e-04

Joint ci ratio: 1.241936e-01	ci left: 2.471258e-04	ci right 2.801027e-04	k: 995	n:3780000
Cons ci ratio: 1.065181e-03	ci left: 7.813804e-01	ci right 7.822134e-01	k: 2955193	n:3780000
KS ci ratio: 2.293918e-01	ci left: 6.839248e-05	ci right 8.635641e-05	k: 291	n:3780000
SLC26A11   3780000 perm   6049 sec   (625 perm/sec)   p_kst 7.698413e-05   p_cons 7.817971e-01   p_joint 2.632275e-04

Joint ci ratio: 1.241936e-01	ci left: 2.464738e-04	ci right 2.793636e-04	k: 995	n:3790000
Cons ci ratio: 1.063787e-03	ci left: 7.813770e-01	ci right 7.822089e-01	k: 2962996	n:3790000
KS ci ratio: 2.293918e-01	ci left: 6.821203e-05	ci right 8.612855e-05	k: 291	n:3790000
SLC26A11   3790000 perm   6079 sec   (623 perm/sec)   p_kst 7.678100e-05   p_cons 7.817931e-01   p_joint 2.625330e-04

Joint ci ratio: 1.241313e-01	ci left: 2.460801e-04	ci right 2.788998e-04	k: 996	n:3800000
Cons ci ratio: 1.062349e-03	ci left: 7.813896e-01	ci right 7.822204e-01	k: 2970860	n:3800000
KS ci ratio: 2.293918e-01	ci left: 6.803252e-05	ci right 8.590190e-05	k: 291	n:3800000
SLC26A11   3800000 perm   6109 sec   (622 perm/sec)   p_kst 7.657895e-05   p_cons 7.818053e-01   p_joint 2.621053e-04

Joint ci ratio: 1.240070e-01	ci left: 2.459429e-04	ci right 2.787090e-04	k: 998	n:3810000
Cons ci ratio: 1.060990e-03	ci left: 7.813784e-01	ci right 7.822081e-01	k: 2978633	n:3810000
KS ci ratio: 2.293918e-01	ci left: 6.785396e-05	ci right 8.567644e-05	k: 291	n:3810000
SLC26A11   3810000 perm   6139 sec   (621 perm/sec)   p_kst 7.637795e-05   p_cons 7.817934e-01   p_joint 2.619423e-04

Joint ci ratio: 1.238831e-01	ci left: 2.458064e-04	ci right 2.785192e-04	k: 1000	n:3820000
Cons ci ratio: 1.059606e-03	ci left: 7.813771e-01	ci right 7.822057e-01	k: 2986444	n:3820000
KS ci ratio: 2.286102e-01	ci left: 6.816986e-05	ci right 8.600569e-05	k: 293	n:3820000
SLC26A11   3820000 perm   6169 sec   (619 perm/sec)   p_kst 7.670157e-05   p_cons 7.817916e-01   p_joint 2.617801e-04

Joint ci ratio: 1.236979e-01	ci left: 2.459236e-04	ci right 2.785995e-04	k: 1003	n:3830000
Cons ci ratio: 1.058223e-03	ci left: 7.813774e-01	ci right 7.822049e-01	k: 2994261	n:3830000
KS ci ratio: 2.282224e-01	ci left: 6.823803e-05	ci right 8.605715e-05	k: 294	n:3830000
SLC26A11   3830000 perm   6198 sec   (618 perm/sec)   p_kst 7.676240e-05   p_cons 7.817914e-01   p_joint 2.618799e-04

Joint ci ratio: 1.251400e-01	ci left: 2.394800e-04	ci right 2.716981e-04	k: 980	n:3840000
Cons ci ratio: 1.056812e-03	ci left: 7.813884e-01	ci right 7.822148e-01	k: 3002119	n:3840000
KS ci ratio: 2.278366e-01	ci left: 6.830587e-05	ci right 8.610831e-05	k: 295	n:3840000
SLC26A11   3840000 perm   6228 sec   (617 perm/sec)   p_kst 7.682292e-05   p_cons 7.818018e-01   p_joint 2.552083e-04

Joint ci ratio: 1.249490e-01	ci left: 2.396128e-04	ci right 2.717960e-04	k: 983	n:3850000
Cons ci ratio: 1.055423e-03	ci left: 7.813939e-01	ci right 7.822192e-01	k: 3009956	n:3850000
KS ci ratio: 2.278366e-01	ci left: 6.812845e-05	ci right 8.588465e-05	k: 295	n:3850000
SLC26A11   3850000 perm   6258 sec   (615 perm/sec)   p_kst 7.662338e-05   p_cons 7.818068e-01   p_joint 2.553247e-04

Joint ci ratio: 1.249491e-01	ci left: 2.389920e-04	ci right 2.710919e-04	k: 983	n:3860000
Cons ci ratio: 1.054126e-03	ci left: 7.813716e-01	ci right 7.821959e-01	k: 3017686	n:3860000
KS ci ratio: 2.278366e-01	ci left: 6.795195e-05	ci right 8.566215e-05	k: 295	n:3860000
SLC26A11   3860000 perm   6288 sec   (614 perm/sec)   p_kst 7.642487e-05   p_cons 7.817839e-01   p_joint 2.546632e-04

Joint ci ratio: 1.248223e-01	ci left: 2.388751e-04	ci right 2.709243e-04	k: 985	n:3870000
Cons ci ratio: 1.052736e-03	ci left: 7.813809e-01	ci right 7.822042e-01	k: 3025538	n:3870000
KS ci ratio: 2.274527e-01	ci left: 6.802002e-05	ci right 8.571391e-05	k: 296	n:3870000
SLC26A11   3870000 perm   6318 sec   (613 perm/sec)   p_kst 7.648579e-05   p_cons 7.817928e-01   p_joint 2.545220e-04

Joint ci ratio: 1.248224e-01	ci left: 2.382595e-04	ci right 2.702261e-04	k: 985	n:3880000
Cons ci ratio: 1.051400e-03	ci left: 7.813743e-01	ci right 7.821965e-01	k: 3033328	n:3880000
KS ci ratio: 2.274527e-01	ci left: 6.784471e-05	ci right 8.549300e-05	k: 296	n:3880000
SLC26A11   3880000 perm   6348 sec   (611 perm/sec)   p_kst 7.628866e-05   p_cons 7.817856e-01   p_joint 2.538660e-04

Joint ci ratio: 1.245699e-01	ci left: 2.386432e-04	ci right 2.705917e-04	k: 989	n:3890000
Cons ci ratio: 1.050031e-03	ci left: 7.813805e-01	ci right 7.822016e-01	k: 3041168	n:3890000
KS ci ratio: 2.274528e-01	ci left: 6.767031e-05	ci right 8.527322e-05	k: 296	n:3890000
SLC26A11   3890000 perm   6378 sec   (610 perm/sec)   p_kst 7.609254e-05   p_cons 7.817913e-01   p_joint 2.542416e-04

Joint ci ratio: 1.245071e-01	ci left: 2.382797e-04	ci right 2.701623e-04	k: 990	n:3900000
Cons ci ratio: 1.048717e-03	ci left: 7.813700e-01	ci right 7.821901e-01	k: 3048943	n:3900000
KS ci ratio: 2.274528e-01	ci left: 6.749679e-05	ci right 8.505457e-05	k: 296	n:3900000
SLC26A11   3900000 perm   6409 sec   (609 perm/sec)   p_kst 7.589744e-05   p_cons 7.817803e-01   p_joint 2.538462e-04

Joint ci ratio: 1.243190e-01	ci left: 2.384137e-04	ci right 2.702625e-04	k: 993	n:3910000
Cons ci ratio: 1.047387e-03	ci left: 7.813667e-01	ci right 7.821858e-01	k: 3056746	n:3910000
KS ci ratio: 2.274528e-01	ci left: 6.732416e-05	ci right 8.483704e-05	k: 296	n:3910000
SLC26A11   3910000 perm   6439 sec   (607 perm/sec)   p_kst 7.570332e-05   p_cons 7.817765e-01   p_joint 2.539642e-04

Joint ci ratio: 1.238217e-01	ci left: 2.397830e-04	ci right 2.716771e-04	k: 1001	n:3920000
Cons ci ratio: 1.046037e-03	ci left: 7.813717e-01	ci right 7.821897e-01	k: 3064581	n:3920000
KS ci ratio: 2.274528e-01	ci left: 6.715242e-05	ci right 8.462062e-05	k: 296	n:3920000
SLC26A11   3920000 perm   6471 sec   (606 perm/sec)   p_kst 7.551020e-05   p_cons 7.817809e-01   p_joint 2.553571e-04

Joint ci ratio: 1.237599e-01	ci left: 2.394194e-04	ci right 2.712482e-04	k: 1002	n:3930000
Cons ci ratio: 1.044681e-03	ci left: 7.813801e-01	ci right 7.821971e-01	k: 3072430	n:3930000
KS ci ratio: 2.274528e-01	ci left: 6.698155e-05	ci right 8.440531e-05	k: 296	n:3930000
SLC26A11   3930000 perm   6501 sec   (604 perm/sec)   p_kst 7.531807e-05   p_cons 7.817888e-01   p_joint 2.549618e-04

Joint ci ratio: 1.142439e-01	ci left: 2.816621e-04	ci right 3.160336e-04	k: 1176	n:3940000
Cons ci ratio: 1.043366e-03	ci left: 7.813769e-01	ci right 7.821928e-01	k: 3080233	n:3940000
KS ci ratio: 2.263127e-01	ci left: 6.752969e-05	ci right 8.499570e-05	k: 299	n:3940000
SLC26A11   3940000 perm   6533 sec   (603 perm/sec)   p_kst 7.588832e-05   p_cons 7.817850e-01   p_joint 2.984772e-04

Joint ci ratio: 1.142439e-01	ci left: 2.809490e-04	ci right 3.152335e-04	k: 1176	n:3950000
Cons ci ratio: 1.042036e-03	ci left: 7.813802e-01	ci right 7.821951e-01	k: 3088062	n:3950000
KS ci ratio: 2.263127e-01	ci left: 6.735873e-05	ci right 8.478052e-05	k: 299	n:3950000
SLC26A11   3950000 perm   6564 sec   (602 perm/sec)   p_kst 7.569620e-05   p_cons 7.817878e-01   p_joint 2.977215e-04

Joint ci ratio: 1.141954e-01	ci left: 2.804848e-04	ci right 3.146972e-04	k: 1177	n:3960000
Cons ci ratio: 1.040678e-03	ci left: 7.813941e-01	ci right 7.822080e-01	k: 3095933	n:3960000
KS ci ratio: 2.263127e-01	ci left: 6.718863e-05	ci right 8.456643e-05	k: 299	n:3960000
SLC26A11   3960000 perm   6594 sec   (601 perm/sec)   p_kst 7.550505e-05   p_cons 7.818013e-01   p_joint 2.972222e-04

Joint ci ratio: 1.138576e-01	ci left: 2.814913e-04	ci right 3.157180e-04	k: 1184	n:3970000
Cons ci ratio: 1.039312e-03	ci left: 7.814125e-01	ci right 7.822253e-01	k: 3103822	n:3970000
KS ci ratio: 2.251895e-01	ci left: 6.773233e-05	ci right 8.515174e-05	k: 302	n:3970000
SLC26A11   3970000 perm   6626 sec   (599 perm/sec)   p_kst 7.607053e-05   p_cons 7.818191e-01   p_joint 2.982368e-04

Joint ci ratio: 1.136181e-01	ci left: 2.820045e-04	ci right 3.162168e-04	k: 1189	n:3980000
Cons ci ratio: 1.038047e-03	ci left: 7.813994e-01	ci right 7.822112e-01	k: 3111586	n:3980000
KS ci ratio: 2.248188e-01	ci left: 6.779925e-05	ci right 8.520318e-05	k: 303	n:3980000
SLC26A11   3980000 perm   6657 sec   (598 perm/sec)   p_kst 7.613065e-05   p_cons 7.818055e-01   p_joint 2.987437e-04

Joint ci ratio: 1.135704e-01	ci left: 2.815413e-04	ci right 3.156820e-04	k: 1190	n:3990000
Cons ci ratio: 1.036805e-03	ci left: 7.813804e-01	ci right 7.821912e-01	k: 3119326	n:3990000
KS ci ratio: 2.248188e-01	ci left: 6.762932e-05	ci right 8.498964e-05	k: 303	n:3990000
SLC26A11   3990000 perm   6688 sec   (597 perm/sec)   p_kst 7.593985e-05   p_cons 7.817860e-01   p_joint 2.982456e-04

Joint ci ratio: 1.135705e-01	ci left: 2.808374e-04	ci right 3.148928e-04	k: 1190	n:4000000
Cons ci ratio: 1.035467e-03	ci left: 7.813944e-01	ci right 7.822042e-01	k: 3127198	n:4000000
KS ci ratio: 2.248188e-01	ci left: 6.746025e-05	ci right 8.477717e-05	k: 303	n:4000000
SLC26A11   4000000 perm   6720 sec   (595 perm/sec)   p_kst 7.575000e-05   p_cons 7.817995e-01   p_joint 2.975000e-04

Joint ci ratio: 1.134753e-01	ci left: 2.806217e-04	ci right 3.146204e-04	k: 1192	n:4010000
Cons ci ratio: 1.034218e-03	ci left: 7.813807e-01	ci right 7.821895e-01	k: 3134959	n:4010000
KS ci ratio: 2.244500e-01	ci left: 6.752736e-05	ci right 8.482914e-05	k: 304	n:4010000
SLC26A11   4010000 perm   6751 sec   (594 perm/sec)   p_kst 7.581047e-05   p_cons 7.817853e-01   p_joint 2.972569e-04

Joint ci ratio: 1.132382e-01	ci left: 2.811321e-04	ci right 3.151168e-04	k: 1197	n:4020000
Cons ci ratio: 1.032937e-03	ci left: 7.813792e-01	ci right 7.821870e-01	k: 3142769	n:4020000
KS ci ratio: 2.244500e-01	ci left: 6.735939e-05	ci right 8.461812e-05	k: 304	n:4020000
SLC26A11   4020000 perm   6782 sec   (593 perm/sec)   p_kst 7.562189e-05   p_cons 7.817833e-01   p_joint 2.977612e-04

Joint ci ratio: 1.129087e-01	ci left: 2.821224e-04	ci right 3.161210e-04	k: 1204	n:4030000
Cons ci ratio: 1.031713e-03	ci left: 7.813604e-01	ci right 7.821672e-01	k: 3150509	n:4030000
KS ci ratio: 2.233542e-01	ci left: 6.789491e-05	ci right 8.519425e-05	k: 307	n:4030000
SLC26A11   4030000 perm   6813 sec   (591 perm/sec)   p_kst 7.617866e-05   p_cons 7.817640e-01   p_joint 2.987593e-04

Joint ci ratio: 1.127218e-01	ci left: 2.823862e-04	ci right 3.163565e-04	k: 1208	n:4040000
Cons ci ratio: 1.030453e-03	ci left: 7.813551e-01	ci right 7.821609e-01	k: 3158303	n:4040000
KS ci ratio: 2.226325e-01	ci left: 6.819426e-05	ci right 8.550603e-05	k: 309	n:4040000
SLC26A11   4040000 perm   6845 sec   (590 perm/sec)   p_kst 7.648515e-05   p_cons 7.817582e-01   p_joint 2.990099e-04

Joint ci ratio: 1.125358e-01	ci left: 2.826488e-04	ci right 3.165909e-04	k: 1212	n:4050000
Cons ci ratio: 1.029155e-03	ci left: 7.813638e-01	ci right 7.821686e-01	k: 3166154	n:4050000
KS ci ratio: 2.219177e-01	ci left: 6.849221e-05	ci right 8.581617e-05	k: 311	n:4050000
SLC26A11   4050000 perm   6878 sec   (589 perm/sec)   p_kst 7.679012e-05   p_cons 7.817664e-01   p_joint 2.992593e-04

Joint ci ratio: 1.124894e-01	ci left: 2.821920e-04	ci right 3.160643e-04	k: 1213	n:4060000
Cons ci ratio: 1.027918e-03	ci left: 7.813541e-01	ci right 7.821579e-01	k: 3173930	n:4060000
KS ci ratio: 2.219177e-01	ci left: 6.832351e-05	ci right 8.560480e-05	k: 311	n:4060000
SLC26A11   4060000 perm   6910 sec   (588 perm/sec)   p_kst 7.660099e-05   p_cons 7.817562e-01   p_joint 2.987685e-04

Joint ci ratio: 1.151284e-01	ci left: 2.683696e-04	ci right 3.013899e-04	k: 1158	n:4070000
Cons ci ratio: 1.026717e-03	ci left: 7.813338e-01	ci right 7.821366e-01	k: 3181663	n:4070000
KS ci ratio: 2.212098e-01	ci left: 6.861977e-05	ci right 8.591310e-05	k: 313	n:4070000
SLC26A11   4070000 perm   6941 sec   (586 perm/sec)   p_kst 7.690418e-05   p_cons 7.817354e-01   p_joint 2.845209e-04

Joint ci ratio: 1.150292e-01	ci left: 2.681880e-04	ci right 3.011555e-04	k: 1160	n:4080000
Cons ci ratio: 1.025371e-03	ci left: 7.813631e-01	ci right 7.821649e-01	k: 3189598	n:4080000
KS ci ratio: 2.212099e-01	ci left: 6.845158e-05	ci right 8.570253e-05	k: 313	n:4080000
SLC26A11   4080000 perm   6973 sec   (585 perm/sec)   p_kst 7.671569e-05   p_cons 7.817642e-01   p_joint 2.843137e-04

Joint ci ratio: 1.149303e-01	ci left: 2.680072e-04	ci right 3.009222e-04	k: 1162	n:4090000
Cons ci ratio: 1.024126e-03	ci left: 7.813605e-01	ci right 7.821614e-01	k: 3197403	n:4090000
KS ci ratio: 2.208584e-01	ci left: 6.851518e-05	ci right 8.575100e-05	k: 314	n:4090000
SLC26A11   4090000 perm   7005 sec   (584 perm/sec)   p_kst 7.677262e-05   p_cons 7.817611e-01   p_joint 2.841076e-04

Joint ci ratio: 1.147823e-01	ci left: 2.680642e-04	ci right 3.009410e-04	k: 1165	n:4100000
Cons ci ratio: 1.022955e-03	ci left: 7.813347e-01	ci right 7.821346e-01	k: 3205113	n:4100000
KS ci ratio: 2.201606e-01	ci left: 6.880894e-05	ci right 8.605655e-05	k: 316	n:4100000
SLC26A11   4100000 perm   7038 sec   (583 perm/sec)   p_kst 7.707317e-05   p_cons 7.817349e-01   p_joint 2.841463e-04

Joint ci ratio: 1.146349e-01	ci left: 2.681209e-04	ci right 3.009596e-04	k: 1168	n:4110000
Cons ci ratio: 1.021648e-03	ci left: 7.813558e-01	ci right 7.821547e-01	k: 3213015	n:4110000
KS ci ratio: 2.198142e-01	ci left: 6.887143e-05	ci right 8.610386e-05	k: 317	n:4110000
SLC26A11   4110000 perm   7069 sec   (581 perm/sec)   p_kst 7.712895e-05   p_cons 7.817555e-01   p_joint 2.841849e-04

Joint ci ratio: 1.142932e-01	ci left: 2.691206e-04	ci right 3.019768e-04	k: 1175	n:4120000
Cons ci ratio: 1.020384e-03	ci left: 7.813642e-01	ci right 7.821621e-01	k: 3220865	n:4120000
KS ci ratio: 2.191261e-01	ci left: 6.916302e-05	ci right 8.640695e-05	k: 319	n:4120000
SLC26A11   4120000 perm   7101 sec   (580 perm/sec)   p_kst 7.742718e-05   p_cons 7.817633e-01   p_joint 2.851942e-04

Joint ci ratio: 1.185004e-01	ci left: 2.491919e-04	ci right 2.808135e-04	k: 1093	n:4130000
Cons ci ratio: 1.019142e-03	ci left: 7.813667e-01	ci right 7.821637e-01	k: 3228691	n:4130000
KS ci ratio: 2.187845e-01	ci left: 6.922440e-05	ci right 8.645312e-05	k: 320	n:4130000
SLC26A11   4130000 perm   7134 sec   (579 perm/sec)   p_kst 7.748184e-05   p_cons 7.817654e-01   p_joint 2.646489e-04

Joint ci ratio: 1.182305e-01	ci left: 2.497620e-04	ci right 2.813786e-04	k: 1098	n:4140000
Cons ci ratio: 1.017919e-03	ci left: 7.813644e-01	ci right 7.821604e-01	k: 3236497	n:4140000
KS ci ratio: 2.184445e-01	ci left: 6.928552e-05	ci right 8.649905e-05	k: 321	n:4140000
SLC26A11   4140000 perm   7166 sec   (578 perm/sec)   p_kst 7.753623e-05   p_cons 7.817626e-01   p_joint 2.652174e-04

Joint ci ratio: 1.180159e-01	ci left: 2.500955e-04	ci right 2.816929e-04	k: 1102	n:4150000
Cons ci ratio: 1.016676e-03	ci left: 7.813702e-01	ci right 7.821653e-01	k: 3244337	n:4150000
KS ci ratio: 2.181061e-01	ci left: 6.934636e-05	ci right 8.654473e-05	k: 322	n:4150000
SLC26A11   4150000 perm   7198 sec   (577 perm/sec)   p_kst 7.759036e-05   p_cons 7.817680e-01   p_joint 2.655422e-04

Joint ci ratio: 1.180159e-01	ci left: 2.494943e-04	ci right 2.810158e-04	k: 1102	n:4160000
Cons ci ratio: 1.015485e-03	ci left: 7.813597e-01	ci right 7.821538e-01	k: 3252109	n:4160000
KS ci ratio: 2.181061e-01	ci left: 6.917966e-05	ci right 8.633669e-05	k: 322	n:4160000
SLC26A11   4160000 perm   7231 sec   (575 perm/sec)   p_kst 7.740385e-05   p_cons 7.817570e-01   p_joint 2.649038e-04

Joint ci ratio: 1.179625e-01	ci left: 2.491288e-04	ci right 2.805888e-04	k: 1103	n:4170000
Cons ci ratio: 1.014320e-03	ci left: 7.813426e-01	ci right 7.821357e-01	k: 3259853	n:4170000
KS ci ratio: 2.181062e-01	ci left: 6.901376e-05	ci right 8.612965e-05	k: 322	n:4170000
SLC26A11   4170000 perm   7263 sec   (574 perm/sec)   p_kst 7.721823e-05   p_cons 7.817393e-01   p_joint 2.645084e-04

Joint ci ratio: 1.178558e-01	ci left: 2.489971e-04	ci right 2.804101e-04	k: 1105	n:4180000
Cons ci ratio: 1.013175e-03	ci left: 7.813197e-01	ci right 7.821120e-01	k: 3267573	n:4180000
KS ci ratio: 2.181062e-01	ci left: 6.884865e-05	ci right 8.592360e-05	k: 322	n:4180000
SLC26A11   4180000 perm   7296 sec   (573 perm/sec)   p_kst 7.703349e-05   p_cons 7.817160e-01   p_joint 2.643541e-04

Joint ci ratio: 1.178026e-01	ci left: 2.486345e-04	ci right 2.799866e-04	k: 1106	n:4190000
Cons ci ratio: 1.011980e-03	ci left: 7.813151e-01	ci right 7.821064e-01	k: 3275369	n:4190000
KS ci ratio: 2.181062e-01	ci left: 6.868433e-05	ci right 8.571853e-05	k: 322	n:4190000
SLC26A11   4190000 perm   7328 sec   (572 perm/sec)   p_kst 7.684964e-05   p_cons 7.817110e-01   p_joint 2.639618e-04

Joint ci ratio: 1.176433e-01	ci left: 2.487357e-04	ci right 2.800552e-04	k: 1109	n:4200000
Cons ci ratio: 1.010748e-03	ci left: 7.813244e-01	ci right 7.821147e-01	k: 3283223	n:4200000
KS ci ratio: 2.181062e-01	ci left: 6.852080e-05	ci right 8.551444e-05	k: 322	n:4200000
SLC26A11   4200000 perm   7361 sec   (571 perm/sec)   p_kst 7.666667e-05   p_cons 7.817198e-01   p_joint 2.640476e-04

Joint ci ratio: 1.173266e-01	ci left: 2.495282e-04	ci right 2.808571e-04	k: 1115	n:4210000
Cons ci ratio: 1.009494e-03	ci left: 7.813429e-01	ci right 7.821323e-01	k: 3291116	n:4210000
KS ci ratio: 2.174341e-01	ci left: 6.880719e-05	ci right 8.581225e-05	k: 324	n:4210000
SLC26A11   4210000 perm   7394 sec   (569 perm/sec)   p_kst 7.695962e-05   p_cons 7.817378e-01   p_joint 2.648456e-04

Joint ci ratio: 1.171692e-01	ci left: 2.496270e-04	ci right 2.809233e-04	k: 1118	n:4220000
Cons ci ratio: 1.008321e-03	ci left: 7.813354e-01	ci right 7.821239e-01	k: 3298900	n:4220000
KS ci ratio: 2.171003e-01	ci left: 6.886822e-05	ci right 8.585874e-05	k: 325	n:4220000
SLC26A11   4220000 perm   7427 sec   (568 perm/sec)   p_kst 7.701422e-05   p_cons 7.817299e-01   p_joint 2.649289e-04

Joint ci ratio: 1.188272e-01	ci left: 2.419245e-04	ci right 2.727144e-04	k: 1087	n:4230000
Cons ci ratio: 1.007130e-03	ci left: 7.813354e-01	ci right 7.821229e-01	k: 3306715	n:4230000
KS ci ratio: 2.171003e-01	ci left: 6.870541e-05	ci right 8.565577e-05	k: 325	n:4230000
SLC26A11   4230000 perm   7461 sec   (567 perm/sec)   p_kst 7.683215e-05   p_cons 7.817293e-01   p_joint 2.569740e-04

Joint ci ratio: 1.185550e-01	ci left: 2.424981e-04	ci right 2.732854e-04	k: 1092	n:4240000
Cons ci ratio: 1.005969e-03	ci left: 7.813266e-01	ci right 7.821132e-01	k: 3314493	n:4240000
KS ci ratio: 2.167681e-01	ci left: 6.876640e-05	ci right 8.570239e-05	k: 326	n:4240000
SLC26A11   4240000 perm   7494 sec   (566 perm/sec)   p_kst 7.688679e-05   p_cons 7.817200e-01   p_joint 2.575472e-04

Joint ci ratio: 1.185008e-01	ci left: 2.421559e-04	ci right 2.728847e-04	k: 1093	n:4250000
Cons ci ratio: 1.004789e-03	ci left: 7.813253e-01	ci right 7.821110e-01	k: 3322303	n:4250000
KS ci ratio: 2.164374e-01	ci left: 6.882713e-05	ci right 8.574878e-05	k: 327	n:4250000
SLC26A11   4250000 perm   7528 sec   (565 perm/sec)   p_kst 7.694118e-05   p_cons 7.817184e-01   p_joint 2.571765e-04

Joint ci ratio: 1.184467e-01	ci left: 2.418152e-04	ci right 2.724858e-04	k: 1094	n:4260000
Cons ci ratio: 1.003605e-03	ci left: 7.813274e-01	ci right 7.821121e-01	k: 3330127	n:4260000
KS ci ratio: 2.164374e-01	ci left: 6.866556e-05	ci right 8.554749e-05	k: 327	n:4260000
SLC26A11   4260000 perm   7562 sec   (563 perm/sec)   p_kst 7.676056e-05   p_cons 7.817200e-01   p_joint 2.568075e-04

Joint ci ratio: 1.183927e-01	ci left: 2.414761e-04	ci right 2.720888e-04	k: 1095	n:4270000
Cons ci ratio: 1.002450e-03	ci left: 7.813205e-01	ci right 7.821044e-01	k: 3337913	n:4270000
KS ci ratio: 2.164375e-01	ci left: 6.850475e-05	ci right 8.534715e-05	k: 327	n:4270000
SLC26A11   4270000 perm   7595 sec   (562 perm/sec)   p_kst 7.658080e-05   p_cons 7.817126e-01   p_joint 2.564403e-04

Joint ci ratio: 1.086212e-01	ci left: 2.876792e-04	ci right 3.209469e-04	k: 1301	n:4280000
Cons ci ratio: 1.001247e-03	ci left: 7.813317e-01	ci right 7.821146e-01	k: 3345776	n:4280000
KS ci ratio: 2.161083e-01	ci left: 6.856568e-05	ci right 8.539402e-05	k: 328	n:4280000
SLC26A11   4280000 perm   7629 sec   (561 perm/sec)   p_kst 7.663551e-05   p_cons 7.817234e-01   p_joint 3.039720e-04

Joint ci ratio: 1.084962e-01	ci left: 2.876890e-04	ci right 3.209170e-04	k: 1304	n:4290000
Cons ci ratio: 1.000073e-03	ci left: 7.813345e-01	ci right 7.821165e-01	k: 3353603	n:4290000
KS ci ratio: 2.161083e-01	ci left: 6.840586e-05	ci right 8.519497e-05	k: 328	n:4290000
SLC26A11   4290000 perm   7663 sec   (560 perm/sec)   p_kst 7.645688e-05   p_cons 7.817256e-01   p_joint 3.039627e-04

Joint ci ratio: 1.083717e-01	ci left: 2.876987e-04	ci right 3.208873e-04	k: 1307	n:4300000
Cons ci ratio: 9.989625e-04	ci left: 7.813167e-01	ci right 7.820978e-01	k: 3361342	n:4300000
KS ci ratio: 2.157806e-01	ci left: 6.846675e-05	ci right 8.524195e-05	k: 329	n:4300000
SLC26A11   4300000 perm   7696 sec   (559 perm/sec)   p_kst 7.651163e-05   p_cons 7.817074e-01   p_joint 3.039535e-04

Joint ci ratio: 1.083304e-01	ci left: 2.872569e-04	ci right 3.203811e-04	k: 1308	n:4310000
Cons ci ratio: 9.977799e-04	ci left: 7.813250e-01	ci right 7.821052e-01	k: 3369193	n:4310000
KS ci ratio: 2.157806e-01	ci left: 6.830790e-05	ci right 8.504418e-05	k: 329	n:4310000
SLC26A11   4310000 perm   7730 sec   (558 perm/sec)   p_kst 7.633411e-05   p_cons 7.817153e-01   p_joint 3.034803e-04

Joint ci ratio: 1.081240e-01	ci left: 2.877180e-04	ci right 3.208282e-04	k: 1313	n:4320000
Cons ci ratio: 9.966212e-04	ci left: 7.813266e-01	ci right 7.821059e-01	k: 3377015	n:4320000
KS ci ratio: 2.154544e-01	ci left: 6.836876e-05	ci right 8.509128e-05	k: 330	n:4320000
SLC26A11   4320000 perm   7764 sec   (556 perm/sec)   p_kst 7.638889e-05   p_cons 7.817164e-01   p_joint 3.039352e-04

Joint ci ratio: 1.125833e-01	ci left: 2.641467e-04	ci right 2.958812e-04	k: 1211	n:4330000
Cons ci ratio: 9.954388e-04	ci left: 7.813376e-01	ci right 7.821160e-01	k: 3384878	n:4330000
KS ci ratio: 2.148064e-01	ci left: 6.864787e-05	ci right 8.538150e-05	k: 332	n:4330000
SLC26A11   4330000 perm   7797 sec   (555 perm/sec)   p_kst 7.667436e-05   p_cons 7.817270e-01   p_joint 2.796767e-04

Joint ci ratio: 1.124905e-01	ci left: 2.639859e-04	ci right 2.956732e-04	k: 1213	n:4340000
Cons ci ratio: 9.942774e-04	ci left: 7.813429e-01	ci right 7.821203e-01	k: 3392716	n:4340000
KS ci ratio: 2.144846e-01	ci left: 6.870773e-05	ci right 8.542755e-05	k: 333	n:4340000
SLC26A11   4340000 perm   7832 sec   (554 perm/sec)   p_kst 7.672811e-05   p_cons 7.817318e-01   p_joint 2.794931e-04

Joint ci ratio: 1.123980e-01	ci left: 2.638259e-04	ci right 2.954662e-04	k: 1215	n:4350000
Cons ci ratio: 9.931481e-04	ci left: 7.813384e-01	ci right 7.821150e-01	k: 3400512	n:4350000
KS ci ratio: 2.144846e-01	ci left: 6.854978e-05	ci right 8.523117e-05	k: 333	n:4350000
SLC26A11   4350000 perm   7866 sec   (553 perm/sec)   p_kst 7.655172e-05   p_cons 7.817269e-01   p_joint 2.793103e-04

Joint ci ratio: 1.123057e-01	ci left: 2.636666e-04	ci right 2.952601e-04	k: 1217	n:4360000
Cons ci ratio: 9.920334e-04	ci left: 7.813303e-01	ci right 7.821060e-01	k: 3408292	n:4360000
KS ci ratio: 2.144846e-01	ci left: 6.839255e-05	ci right 8.503569e-05	k: 333	n:4360000
SLC26A11   4360000 perm   7900 sec   (552 perm/sec)   p_kst 7.637615e-05   p_cons 7.817183e-01   p_joint 2.791284e-04

Joint ci ratio: 1.122596e-01	ci left: 2.632857e-04	ci right 2.948198e-04	k: 1218	n:4370000
Cons ci ratio: 9.908686e-04	ci left: 7.813408e-01	ci right 7.821156e-01	k: 3416153	n:4370000
KS ci ratio: 2.144846e-01	ci left: 6.823605e-05	ci right 8.484110e-05	k: 333	n:4370000
SLC26A11   4370000 perm   7935 sec   (551 perm/sec)   p_kst 7.620137e-05   p_cons 7.817284e-01   p_joint 2.787185e-04

Joint ci ratio: 1.121677e-01	ci left: 2.631283e-04	ci right 2.946161e-04	k: 1220	n:4380000
Cons ci ratio: 9.897337e-04	ci left: 7.813423e-01	ci right 7.821162e-01	k: 3423975	n:4380000
KS ci ratio: 2.144847e-01	ci left: 6.808026e-05	ci right 8.464740e-05	k: 333	n:4380000
SLC26A11   4380000 perm   7969 sec   (550 perm/sec)   p_kst 7.602740e-05   p_cons 7.817295e-01   p_joint 2.785388e-04

Joint ci ratio: 1.120301e-01	ci left: 2.631932e-04	ci right 2.946475e-04	k: 1223	n:4390000
Cons ci ratio: 9.886278e-04	ci left: 7.813352e-01	ci right 7.821082e-01	k: 3431759	n:4390000
KS ci ratio: 2.141643e-01	ci left: 6.814074e-05	ci right 8.469458e-05	k: 334	n:4390000
SLC26A11   4390000 perm   8003 sec   (549 perm/sec)   p_kst 7.608200e-05   p_cons 7.817219e-01   p_joint 2.785877e-04

Joint ci ratio: 1.118931e-01	ci left: 2.632577e-04	ci right 2.946788e-04	k: 1226	n:4400000
Cons ci ratio: 9.875183e-04	ci left: 7.813305e-01	ci right 7.821027e-01	k: 3439554	n:4400000
KS ci ratio: 2.135278e-01	ci left: 6.841608e-05	ci right 8.498094e-05	k: 336	n:4400000
SLC26A11   4400000 perm   8037 sec   (547 perm/sec)   p_kst 7.636364e-05   p_cons 7.817168e-01   p_joint 2.786364e-04

Joint ci ratio: 1.117565e-01	ci left: 2.633220e-04	ci right 2.947098e-04	k: 1229	n:4410000
Cons ci ratio: 9.863857e-04	ci left: 7.813353e-01	ci right 7.821065e-01	k: 3447390	n:4410000
KS ci ratio: 2.135278e-01	ci left: 6.826094e-05	ci right 8.478824e-05	k: 336	n:4410000
SLC26A11   4410000 perm   8071 sec   (546 perm/sec)   p_kst 7.619048e-05   p_cons 7.817211e-01   p_joint 2.786848e-04

Joint ci ratio: 1.116658e-01	ci left: 2.631661e-04	ci right 2.945082e-04	k: 1231	n:4420000
Cons ci ratio: 9.852851e-04	ci left: 7.813302e-01	ci right 7.821006e-01	k: 3455183	n:4420000
KS ci ratio: 2.132117e-01	ci left: 6.832066e-05	ci right 8.483473e-05	k: 337	n:4420000
SLC26A11   4420000 perm   8105 sec   (545 perm/sec)   p_kst 7.624434e-05   p_cons 7.817156e-01   p_joint 2.785068e-04

Joint ci ratio: 1.114849e-01	ci left: 2.634498e-04	ci right 2.947715e-04	k: 1235	n:4430000
Cons ci ratio: 9.841347e-04	ci left: 7.813437e-01	ci right 7.821133e-01	k: 3463058	n:4430000
KS ci ratio: 2.122717e-01	ci left: 6.880756e-05	ci right 8.535645e-05	k: 340	n:4430000
SLC26A11   4430000 perm   8140 sec   (544 perm/sec)   p_kst 7.674944e-05   p_cons 7.817287e-01   p_joint 2.787810e-04

Joint ci ratio: 1.067122e-01	ci left: 2.876130e-04	ci right 3.202517e-04	k: 1348	n:4440000
Cons ci ratio: 9.830150e-04	ci left: 7.813479e-01	ci right 7.821166e-01	k: 3470892	n:4440000
KS ci ratio: 2.116519e-01	ci left: 6.907913e-05	ci right 8.563853e-05	k: 342	n:4440000
SLC26A11   4440000 perm   8174 sec   (543 perm/sec)   p_kst 7.702703e-05   p_cons 7.817324e-01   p_joint 3.036036e-04

Joint ci ratio: 1.065150e-01	ci left: 2.880603e-04	ci right 3.206856e-04	k: 1353	n:4450000
Cons ci ratio: 9.819560e-04	ci left: 7.813323e-01	ci right 7.821001e-01	k: 3478638	n:4450000
KS ci ratio: 2.107323e-01	ci left: 6.956240e-05	ci right 8.615584e-05	k: 345	n:4450000
SLC26A11   4450000 perm   8209 sec   (542 perm/sec)   p_kst 7.752809e-05   p_cons 7.817164e-01   p_joint 3.040449e-04

Joint ci ratio: 1.063188e-01	ci left: 2.885056e-04	ci right 3.211175e-04	k: 1358	n:4460000
Cons ci ratio: 9.808668e-04	ci left: 7.813284e-01	ci right 7.820954e-01	k: 3486436	n:4460000
KS ci ratio: 2.107323e-01	ci left: 6.940643e-05	ci right 8.596267e-05	k: 345	n:4460000
SLC26A11   4460000 perm   8244 sec   (541 perm/sec)   p_kst 7.735426e-05   p_cons 7.817121e-01   p_joint 3.044843e-04

Joint ci ratio: 1.062017e-01	ci left: 2.885135e-04	ci right 3.210880e-04	k: 1361	n:4470000
Cons ci ratio: 9.797313e-04	ci left: 7.813421e-01	ci right 7.821081e-01	k: 3494312	n:4470000
KS ci ratio: 2.104284e-01	ci left: 6.946308e-05	ci right 8.600585e-05	k: 346	n:4470000
SLC26A11   4470000 perm   8279 sec   (540 perm/sec)   p_kst 7.740492e-05   p_cons 7.817253e-01   p_joint 3.044743e-04

Joint ci ratio: 1.059297e-01	ci left: 2.893906e-04	ci right 3.219753e-04	k: 1368	n:4480000
Cons ci ratio: 9.786425e-04	ci left: 7.813406e-01	ci right 7.821059e-01	k: 3502121	n:4480000
KS ci ratio: 2.101259e-01	ci left: 6.951949e-05	ci right 8.604883e-05	k: 347	n:4480000
SLC26A11   4480000 perm   8314 sec   (539 perm/sec)   p_kst 7.745536e-05   p_cons 7.817234e-01   p_joint 3.053571e-04

Joint ci ratio: 1.058911e-01	ci left: 2.889629e-04	ci right 3.214868e-04	k: 1369	n:4490000
Cons ci ratio: 9.774891e-04	ci left: 7.813631e-01	ci right 7.821274e-01	k: 3510037	n:4490000
KS ci ratio: 2.098246e-01	ci left: 6.957566e-05	ci right 8.609159e-05	k: 348	n:4490000
SLC26A11   4490000 perm   8349 sec   (538 perm/sec)   p_kst 7.750557e-05   p_cons 7.817454e-01   p_joint 3.048998e-04

Joint ci ratio: 1.057754e-01	ci left: 2.889697e-04	ci right 3.214567e-04	k: 1372	n:4500000
Cons ci ratio: 9.763327e-04	ci left: 7.813879e-01	ci right 7.821513e-01	k: 3517964	n:4500000
KS ci ratio: 2.095246e-01	ci left: 6.963160e-05	ci right 8.613415e-05	k: 349	n:4500000
SLC26A11   4500000 perm   8384 sec   (537 perm/sec)   p_kst 7.755556e-05   p_cons 7.817698e-01   p_joint 3.048889e-04

Joint ci ratio: 1.056984e-01	ci left: 2.887607e-04	ci right 3.211991e-04	k: 1374	n:4510000
Cons ci ratio: 9.752882e-04	ci left: 7.813748e-01	ci right 7.821375e-01	k: 3525721	n:4510000
KS ci ratio: 2.095247e-01	ci left: 6.947721e-05	ci right 8.594317e-05	k: 349	n:4510000
SLC26A11   4510000 perm   8419 sec   (536 perm/sec)   p_kst 7.738359e-05   p_cons 7.817563e-01   p_joint 3.046563e-04

Joint ci ratio: 1.055833e-01	ci left: 2.887681e-04	ci right 3.211697e-04	k: 1377	n:4520000
Cons ci ratio: 9.742173e-04	ci left: 7.813722e-01	ci right 7.821340e-01	k: 3533525	n:4520000
KS ci ratio: 2.092260e-01	ci left: 6.953314e-05	ci right 8.598585e-05	k: 350	n:4520000
SLC26A11   4520000 perm   8454 sec   (535 perm/sec)   p_kst 7.743363e-05   p_cons 7.817533e-01   p_joint 3.046460e-04

Joint ci ratio: 1.054304e-01	ci left: 2.889903e-04	ci right 3.213670e-04	k: 1381	n:4530000
Cons ci ratio: 9.731455e-04	ci left: 7.813712e-01	ci right 7.821322e-01	k: 3541336	n:4530000
KS ci ratio: 2.089286e-01	ci left: 6.958884e-05	ci right 8.602833e-05	k: 351	n:4530000
SLC26A11   4530000 perm   8489 sec   (534 perm/sec)   p_kst 7.748344e-05   p_cons 7.817519e-01   p_joint 3.048565e-04

Joint ci ratio: 1.052401e-01	ci left: 2.894261e-04	ci right 3.217895e-04	k: 1386	n:4540000
Cons ci ratio: 9.720465e-04	ci left: 7.813810e-01	ci right 7.821411e-01	k: 3549196	n:4540000
KS ci ratio: 2.083375e-01	ci left: 6.985307e-05	ci right 8.630235e-05	k: 353	n:4540000
SLC26A11   4540000 perm   8525 sec   (533 perm/sec)   p_kst 7.775330e-05   p_cons 7.817612e-01   p_joint 3.052863e-04

Joint ci ratio: 1.051265e-01	ci left: 2.894320e-04	ci right 3.217589e-04	k: 1389	n:4550000
Cons ci ratio: 9.709769e-04	ci left: 7.813817e-01	ci right 7.821410e-01	k: 3557015	n:4550000
KS ci ratio: 2.077514e-01	ci left: 7.011621e-05	ci right 8.657510e-05	k: 355	n:4550000
SLC26A11   4550000 perm   8559 sec   (532 perm/sec)   p_kst 7.802198e-05   p_cons 7.817615e-01   p_joint 3.052747e-04

Joint ci ratio: 1.050510e-01	ci left: 2.892243e-04	ci right 3.215035e-04	k: 1391	n:4560000
Cons ci ratio: 9.699207e-04	ci left: 7.813789e-01	ci right 7.821374e-01	k: 3564818	n:4560000
KS ci ratio: 2.074603e-01	ci left: 7.017034e-05	ci right 8.661592e-05	k: 356	n:4560000
SLC26A11   4560000 perm   8594 sec   (531 perm/sec)   p_kst 7.807018e-05   p_cons 7.817583e-01   p_joint 3.050439e-04

Joint ci ratio: 1.049004e-01	ci left: 2.894438e-04	ci right 3.216982e-04	k: 1395	n:4570000
Cons ci ratio: 9.688512e-04	ci left: 7.813821e-01	ci right 7.821397e-01	k: 3572648	n:4570000
KS ci ratio: 2.074603e-01	ci left: 7.001680e-05	ci right 8.642639e-05	k: 356	n:4570000
SLC26A11   4570000 perm   8629 sec   (530 perm/sec)   p_kst 7.789934e-05   p_cons 7.817611e-01   p_joint 3.052516e-04

Joint ci ratio: 1.047130e-01	ci left: 2.898749e-04	ci right 3.221161e-04	k: 1400	n:4580000
Cons ci ratio: 9.677679e-04	ci left: 7.813913e-01	ci right 7.821481e-01	k: 3580506	n:4580000
KS ci ratio: 2.071703e-01	ci left: 7.007093e-05	ci right 8.646735e-05	k: 357	n:4580000
SLC26A11   4580000 perm   8664 sec   (529 perm/sec)   p_kst 7.794760e-05   p_cons 7.817699e-01   p_joint 3.056769e-04

Joint ci ratio: 1.046383e-01	ci left: 2.896677e-04	ci right 3.218614e-04	k: 1402	n:4590000
Cons ci ratio: 9.666889e-04	ci left: 7.814003e-01	ci right 7.821562e-01	k: 3588363	n:4590000
KS ci ratio: 2.068816e-01	ci left: 7.012484e-05	ci right 8.650811e-05	k: 358	n:4590000
SLC26A11   4590000 perm   8701 sec   (528 perm/sec)   p_kst 7.799564e-05   p_cons 7.817784e-01   p_joint 3.054466e-04

Joint ci ratio: 1.045266e-01	ci left: 2.896731e-04	ci right 3.218310e-04	k: 1405	n:4600000
Cons ci ratio: 9.656171e-04	ci left: 7.814079e-01	ci right 7.821630e-01	k: 3596214	n:4600000
KS ci ratio: 2.065940e-01	ci left: 7.017853e-05	ci right 8.654868e-05	k: 359	n:4600000
SLC26A11   4600000 perm   8737 sec   (527 perm/sec)   p_kst 7.804348e-05   p_cons 7.817857e-01   p_joint 3.054348e-04

Joint ci ratio: 1.044153e-01	ci left: 2.896785e-04	ci right 3.218006e-04	k: 1408	n:4610000
Cons ci ratio: 9.645956e-04	ci left: 7.813990e-01	ci right 7.821533e-01	k: 3603989	n:4610000
KS ci ratio: 2.060225e-01	ci left: 7.043773e-05	ci right 8.681716e-05	k: 361	n:4610000
SLC26A11   4610000 perm   8772 sec   (526 perm/sec)   p_kst 7.830803e-05   p_cons 7.817764e-01   p_joint 3.054230e-04

Joint ci ratio: 1.043783e-01	ci left: 2.892622e-04	ci right 3.213262e-04	k: 1409	n:4620000
Cons ci ratio: 9.635100e-04	ci left: 7.814140e-01	ci right 7.821675e-01	k: 3611874	n:4620000
KS ci ratio: 2.060225e-01	ci left: 7.028527e-05	ci right 8.662924e-05	k: 361	n:4620000
SLC26A11   4620000 perm   8809 sec   (524 perm/sec)   p_kst 7.813853e-05   p_cons 7.817909e-01   p_joint 3.049784e-04

Joint ci ratio: 1.041569e-01	ci left: 2.898996e-04	ci right 3.219618e-04	k: 1415	n:4630000
Cons ci ratio: 9.624426e-04	ci left: 7.814237e-01	ci right 7.821764e-01	k: 3619735	n:4630000
KS ci ratio: 2.051741e-01	ci left: 7.074806e-05	ci right 8.712339e-05	k: 364	n:4630000
SLC26A11   4630000 perm   8845 sec   (523 perm/sec)   p_kst 7.861771e-05   p_cons 7.818002e-01   p_joint 3.056156e-04

Joint ci ratio: 1.040101e-01	ci left: 2.901144e-04	ci right 3.221525e-04	k: 1419	n:4640000
Cons ci ratio: 9.614037e-04	ci left: 7.814246e-01	ci right 7.821764e-01	k: 3627555	n:4640000
KS ci ratio: 2.046142e-01	ci left: 7.100450e-05	ci right 8.738875e-05	k: 366	n:4640000
SLC26A11   4640000 perm   8881 sec   (522 perm/sec)   p_kst 7.887931e-05   p_cons 7.818006e-01   p_joint 3.058190e-04

Joint ci ratio: 1.038274e-01	ci left: 2.905379e-04	ci right 3.225629e-04	k: 1424	n:4650000
Cons ci ratio: 9.603446e-04	ci left: 7.814338e-01	ci right 7.821848e-01	k: 3635414	n:4650000
KS ci ratio: 2.037830e-01	ci left: 7.146398e-05	ci right 8.787891e-05	k: 369	n:4650000
SLC26A11   4650000 perm   8916 sec   (522 perm/sec)   p_kst 7.935484e-05   p_cons 7.818095e-01   p_joint 3.062366e-04

Joint ci ratio: 1.070309e-01	ci left: 2.723637e-04	ci right 3.033701e-04	k: 1340	n:4660000
Cons ci ratio: 9.593451e-04	ci left: 7.814230e-01	ci right 7.821732e-01	k: 3643180	n:4660000
KS ci ratio: 2.037830e-01	ci left: 7.131062e-05	ci right 8.769033e-05	k: 369	n:4660000
SLC26A11   4660000 perm   8952 sec   (521 perm/sec)   p_kst 7.918455e-05   p_cons 7.817983e-01   p_joint 2.875536e-04

Joint ci ratio: 1.069114e-01	ci left: 2.724057e-04	ci right 3.033800e-04	k: 1343	n:4670000
Cons ci ratio: 9.582789e-04	ci left: 7.814371e-01	ci right 7.821865e-01	k: 3651062	n:4670000
KS ci ratio: 2.037830e-01	ci left: 7.115792e-05	ci right 8.750256e-05	k: 369	n:4670000
SLC26A11   4670000 perm   8988 sec   (520 perm/sec)   p_kst 7.901499e-05   p_cons 7.818120e-01   p_joint 2.875803e-04

Joint ci ratio: 1.067526e-01	ci left: 2.726555e-04	ci right 3.036093e-04	k: 1347	n:4680000
Cons ci ratio: 9.572852e-04	ci left: 7.814266e-01	ci right 7.821752e-01	k: 3658829	n:4680000
KS ci ratio: 2.035082e-01	ci left: 7.120866e-05	ci right 8.754015e-05	k: 370	n:4680000
SLC26A11   4680000 perm   9024 sec   (519 perm/sec)   p_kst 7.905983e-05   p_cons 7.818011e-01   p_joint 2.878205e-04

Joint ci ratio: 1.065552e-01	ci left: 2.731118e-04	ci right 3.040565e-04	k: 1352	n:4690000
Cons ci ratio: 9.562467e-04	ci left: 7.814332e-01	ci right 7.821810e-01	k: 3666676	n:4690000
KS ci ratio: 2.029618e-01	ci left: 7.146157e-05	ci right 8.780160e-05	k: 372	n:4690000
SLC26A11   4690000 perm   9061 sec   (518 perm/sec)   p_kst 7.931770e-05   p_cons 7.818072e-01   p_joint 2.882729e-04

Joint ci ratio: 1.064372e-01	ci left: 2.731520e-04	ci right 3.040648e-04	k: 1355	n:4700000
Cons ci ratio: 9.552171e-04	ci left: 7.814378e-01	ci right 7.821848e-01	k: 3674514	n:4700000
KS ci ratio: 2.026903e-01	ci left: 7.151148e-05	ci right 8.783835e-05	k: 373	n:4700000
SLC26A11   4700000 perm   9097 sec   (517 perm/sec)   p_kst 7.936170e-05   p_cons 7.818115e-01   p_joint 2.882979e-04

Joint ci ratio: 1.063588e-01	ci left: 2.729854e-04	ci right 3.038552e-04	k: 1357	n:4710000
Cons ci ratio: 9.542132e-04	ci left: 7.814344e-01	ci right 7.821806e-01	k: 3682314	n:4710000
KS ci ratio: 2.024198e-01	ci left: 7.156120e-05	ci right 8.787492e-05	k: 374	n:4710000
SLC26A11   4710000 perm   9133 sec   (516 perm/sec)   p_kst 7.940552e-05   p_cons 7.818076e-01   p_joint 2.881104e-04

Joint ci ratio: 1.062415e-01	ci left: 2.730257e-04	ci right 3.038639e-04	k: 1360	n:4720000
Cons ci ratio: 9.531842e-04	ci left: 7.814411e-01	ci right 7.821865e-01	k: 3690162	n:4720000
KS ci ratio: 2.021505e-01	ci left: 7.161072e-05	ci right 8.791133e-05	k: 375	n:4720000
SLC26A11   4720000 perm   9169 sec   (515 perm/sec)   p_kst 7.944915e-05   p_cons 7.818140e-01   p_joint 2.881356e-04

Joint ci ratio: 1.062025e-01	ci left: 2.726543e-04	ci right 3.034385e-04	k: 1361	n:4730000
Cons ci ratio: 9.521478e-04	ci left: 7.814516e-01	ci right 7.821962e-01	k: 3698028	n:4730000
KS ci ratio: 2.021505e-01	ci left: 7.145932e-05	ci right 8.772547e-05	k: 375	n:4730000
SLC26A11   4730000 perm   9205 sec   (514 perm/sec)   p_kst 7.928118e-05   p_cons 7.818241e-01   p_joint 2.877378e-04

Joint ci ratio: 1.060858e-01	ci left: 2.726952e-04	ci right 3.034481e-04	k: 1364	n:4740000
Cons ci ratio: 9.511466e-04	ci left: 7.814507e-01	ci right 7.821945e-01	k: 3705840	n:4740000
KS ci ratio: 2.018822e-01	ci left: 7.150886e-05	ci right 8.776202e-05	k: 376	n:4740000
SLC26A11   4740000 perm   9242 sec   (513 perm/sec)   p_kst 7.932489e-05   p_cons 7.818228e-01   p_joint 2.877637e-04

Joint ci ratio: 1.060470e-01	ci left: 2.723260e-04	ci right 3.030253e-04	k: 1365	n:4750000
Cons ci ratio: 9.501291e-04	ci left: 7.814567e-01	ci right 7.821998e-01	k: 3713685	n:4750000
KS ci ratio: 2.018822e-01	ci left: 7.135832e-05	ci right 8.757726e-05	k: 376	n:4750000
SLC26A11   4750000 perm   9278 sec   (512 perm/sec)   p_kst 7.915789e-05   p_cons 7.818284e-01   p_joint 2.873684e-04

Joint ci ratio: 1.060082e-01	ci left: 2.719584e-04	ci right 3.026044e-04	k: 1366	n:4760000
Cons ci ratio: 9.491611e-04	ci left: 7.814461e-01	ci right 7.821884e-01	k: 3721451	n:4760000
KS ci ratio: 2.018823e-01	ci left: 7.120840e-05	ci right 8.739328e-05	k: 376	n:4760000
SLC26A11   4760000 perm   9315 sec   (511 perm/sec)   p_kst 7.899160e-05   p_cons 7.818174e-01   p_joint 2.869748e-04

Joint ci ratio: 1.058148e-01	ci left: 2.724088e-04	ci right 3.030460e-04	k: 1371	n:4770000
Cons ci ratio: 9.481483e-04	ci left: 7.814528e-01	ci right 7.821943e-01	k: 3729299	n:4770000
KS ci ratio: 2.016150e-01	ci left: 7.125817e-05	ci right 8.743028e-05	k: 377	n:4770000
SLC26A11   4770000 perm   9352 sec   (510 perm/sec)   p_kst 7.903564e-05   p_cons 7.818237e-01   p_joint 2.874214e-04

Joint ci ratio: 1.058149e-01	ci left: 2.718389e-04	ci right 3.024120e-04	k: 1371	n:4780000
Cons ci ratio: 9.471701e-04	ci left: 7.814481e-01	ci right 7.821888e-01	k: 3737093	n:4780000
KS ci ratio: 2.016151e-01	ci left: 7.110910e-05	ci right 8.724737e-05	k: 377	n:4780000
SLC26A11   4780000 perm   9389 sec   (509 perm/sec)   p_kst 7.887029e-05   p_cons 7.818186e-01   p_joint 2.868201e-04

Joint ci ratio: 1.056609e-01	ci left: 2.720843e-04	ci right 3.026378e-04	k: 1375	n:4790000
Cons ci ratio: 9.461381e-04	ci left: 7.814639e-01	ci right 7.822038e-01	k: 3744985	n:4790000
KS ci ratio: 2.013489e-01	ci left: 7.115888e-05	ci right 8.728451e-05	k: 378	n:4790000
SLC26A11   4790000 perm   9428 sec   (508 perm/sec)   p_kst 7.891441e-05   p_cons 7.818340e-01   p_joint 2.870564e-04

Joint ci ratio: 1.119857e-01	ci left: 2.409144e-04	ci right 2.696940e-04	k: 1224	n:4800000
Cons ci ratio: 9.451488e-04	ci left: 7.814655e-01	ci right 7.822046e-01	k: 3752809	n:4800000
KS ci ratio: 2.010838e-01	ci left: 7.120847e-05	ci right 8.732149e-05	k: 379	n:4800000
SLC26A11   4800000 perm   9465 sec   (507 perm/sec)   p_kst 7.895833e-05   p_cons 7.818352e-01   p_joint 2.550000e-04

Joint ci ratio: 1.020179e-01	ci left: 2.912034e-04	ci right 3.227088e-04	k: 1475	n:4810000
Cons ci ratio: 9.442040e-04	ci left: 7.814520e-01	ci right 7.821904e-01	k: 3760561	n:4810000
KS ci ratio: 2.002946e-01	ci left: 7.165279e-05	ci right 8.779494e-05	k: 382	n:4810000
SLC26A11   4810000 perm   9502 sec   (506 perm/sec)   p_kst 7.941788e-05   p_cons 7.818214e-01   p_joint 3.066528e-04

Joint ci ratio: 1.019143e-01	ci left: 2.912058e-04	ci right 3.226776e-04	k: 1478	n:4820000
Cons ci ratio: 9.432299e-04	ci left: 7.814503e-01	ci right 7.821879e-01	k: 3768369	n:4820000
KS ci ratio: 1.997737e-01	ci left: 7.189829e-05	ci right 8.804849e-05	k: 384	n:4820000
SLC26A11   4820000 perm   9539 sec   (505 perm/sec)   p_kst 7.966805e-05   p_cons 7.818193e-01   p_joint 3.066390e-04

Joint ci ratio: 1.016740e-01	ci left: 2.920153e-04	ci right 3.234957e-04	k: 1485	n:4830000
Cons ci ratio: 9.422662e-04	ci left: 7.814459e-01	ci right 7.821828e-01	k: 3776164	n:4830000
KS ci ratio: 1.995148e-01	ci left: 7.194612e-05	ci right 8.808357e-05	k: 385	n:4830000
SLC26A11   4830000 perm   9576 sec   (504 perm/sec)   p_kst 7.971014e-05   p_cons 7.818145e-01   p_joint 3.074534e-04

Joint ci ratio: 1.016056e-01	ci left: 2.918146e-04	ci right 3.232510e-04	k: 1487	n:4840000
Cons ci ratio: 9.412661e-04	ci left: 7.814557e-01	ci right 7.821918e-01	k: 3784028	n:4840000
KS ci ratio: 1.992568e-01	ci left: 7.199377e-05	ci right 8.811849e-05	k: 386	n:4840000
SLC26A11   4840000 perm   9613 sec   (503 perm/sec)   p_kst 7.975207e-05   p_cons 7.818240e-01   p_joint 3.072314e-04

Joint ci ratio: 1.015034e-01	ci left: 2.918158e-04	ci right 3.232188e-04	k: 1490	n:4850000
Cons ci ratio: 9.403204e-04	ci left: 7.814470e-01	ci right 7.821824e-01	k: 3791802	n:4850000
KS ci ratio: 1.989999e-01	ci left: 7.204124e-05	ci right 8.815325e-05	k: 387	n:4850000
SLC26A11   4850000 perm   9651 sec   (503 perm/sec)   p_kst 7.979381e-05   p_cons 7.818148e-01   p_joint 3.072165e-04

Joint ci ratio: 1.013675e-01	ci left: 2.920175e-04	ci right 3.233976e-04	k: 1494	n:4860000
Cons ci ratio: 9.393611e-04	ci left: 7.814443e-01	ci right 7.821789e-01	k: 3799605	n:4860000
KS ci ratio: 1.987439e-01	ci left: 7.208852e-05	ci right 8.818786e-05	k: 388	n:4860000
SLC26A11   4860000 perm   9689 sec   (502 perm/sec)   p_kst 7.983539e-05   p_cons 7.818117e-01   p_joint 3.074074e-04

Joint ci ratio: 1.012997e-01	ci left: 2.918182e-04	ci right 3.231547e-04	k: 1496	n:4870000
Cons ci ratio: 9.384069e-04	ci left: 7.814407e-01	ci right 7.821746e-01	k: 3807404	n:4870000
KS ci ratio: 1.987439e-01	ci left: 7.194049e-05	ci right 8.800678e-05	k: 388	n:4870000
SLC26A11   4870000 perm   9727 sec   (501 perm/sec)   p_kst 7.967146e-05   p_cons 7.818078e-01   p_joint 3.071869e-04

Joint ci ratio: 1.011647e-01	ci left: 2.920191e-04	ci right 3.233329e-04	k: 1500	n:4880000
Cons ci ratio: 9.374366e-04	ci left: 7.814441e-01	ci right 7.821772e-01	k: 3815237	n:4880000
KS ci ratio: 1.984890e-01	ci left: 7.198780e-05	ci right 8.804153e-05	k: 389	n:4880000
SLC26A11   4880000 perm   9765 sec   (500 perm/sec)   p_kst 7.971311e-05   p_cons 7.818109e-01   p_joint 3.073770e-04

Joint ci ratio: 1.011647e-01	ci left: 2.914219e-04	ci right 3.226717e-04	k: 1500	n:4890000
Cons ci ratio: 9.365034e-04	ci left: 7.814351e-01	ci right 7.821674e-01	k: 3823009	n:4890000
KS ci ratio: 1.984890e-01	ci left: 7.184059e-05	ci right 8.786149e-05	k: 389	n:4890000
SLC26A11   4890000 perm   9803 sec   (499 perm/sec)   p_kst 7.955010e-05   p_cons 7.818014e-01   p_joint 3.067485e-04

Joint ci ratio: 1.010302e-01	ci left: 2.916229e-04	ci right 3.228501e-04	k: 1504	n:4900000
Cons ci ratio: 9.355580e-04	ci left: 7.814316e-01	ci right 7.821632e-01	k: 3830808	n:4900000
KS ci ratio: 1.984890e-01	ci left: 7.169397e-05	ci right 8.768218e-05	k: 389	n:4900000
SLC26A11   4900000 perm   9841 sec   (498 perm/sec)   p_kst 7.938776e-05   p_cons 7.817976e-01   p_joint 3.069388e-04

Joint ci ratio: 1.008627e-01	ci left: 2.920216e-04	ci right 3.232366e-04	k: 1509	n:4910000
Cons ci ratio: 9.345707e-04	ci left: 7.814444e-01	ci right 7.821752e-01	k: 3838687	n:4910000
KS ci ratio: 1.977299e-01	ci left: 7.212865e-05	ci right 8.814486e-05	k: 392	n:4910000
SLC26A11   4910000 perm   9879 sec   (497 perm/sec)   p_kst 7.983707e-05   p_cons 7.818100e-01   p_joint 3.073320e-04

Joint ci ratio: 1.007960e-01	ci left: 2.918243e-04	ci right 3.229964e-04	k: 1511	n:4920000
Cons ci ratio: 9.336261e-04	ci left: 7.814427e-01	ci right 7.821728e-01	k: 3846495	n:4920000
KS ci ratio: 1.977299e-01	ci left: 7.198205e-05	ci right 8.796571e-05	k: 392	n:4920000
SLC26A11   4920000 perm   9917 sec   (496 perm/sec)   p_kst 7.967480e-05   p_cons 7.818079e-01   p_joint 3.071138e-04

Joint ci ratio: 1.006629e-01	ci left: 2.920233e-04	ci right 3.231730e-04	k: 1515	n:4930000
Cons ci ratio: 9.326743e-04	ci left: 7.814447e-01	ci right 7.821740e-01	k: 3854321	n:4930000
KS ci ratio: 1.972287e-01	ci left: 7.222166e-05	ci right 8.821299e-05	k: 394	n:4930000
SLC26A11   4930000 perm   9955 sec   (495 perm/sec)   p_kst 7.991886e-05   p_cons 7.818095e-01   p_joint 3.073022e-04

Joint ci ratio: 1.005635e-01	ci left: 2.920241e-04	ci right 3.231414e-04	k: 1518	n:4940000
Cons ci ratio: 9.317421e-04	ci left: 7.814406e-01	ci right 7.821692e-01	k: 3862117	n:4940000
KS ci ratio: 1.969795e-01	ci left: 7.226791e-05	ci right 8.824683e-05	k: 395	n:4940000
SLC26A11   4940000 perm   9994 sec   (494 perm/sec)   p_kst 7.995951e-05   p_cons 7.818051e-01   p_joint 3.072874e-04

Joint ci ratio: 1.004313e-01	ci left: 2.922220e-04	ci right 3.233169e-04	k: 1522	n:4950000
Cons ci ratio: 9.307988e-04	ci left: 7.814415e-01	ci right 7.821694e-01	k: 3869938	n:4950000
KS ci ratio: 1.969795e-01	ci left: 7.212191e-05	ci right 8.806855e-05	k: 395	n:4950000
SLC26A11   4950000 perm   10032 sec   (493 perm/sec)   p_kst 7.979798e-05   p_cons 7.818057e-01   p_joint 3.074747e-04

Joint ci ratio: 1.004314e-01	ci left: 2.916328e-04	ci right 3.226651e-04	k: 1522	n:4960000
Cons ci ratio: 9.298711e-04	ci left: 7.814379e-01	ci right 7.821650e-01	k: 3877736	n:4960000
KS ci ratio: 1.969795e-01	ci left: 7.197650e-05	ci right 8.789100e-05	k: 395	n:4960000
SLC26A11   4960000 perm   10070 sec   (493 perm/sec)   p_kst 7.963710e-05   p_cons 7.818016e-01   p_joint 3.068548e-04

Joint ci ratio: 1.002997e-01	ci left: 2.918306e-04	ci right 3.228409e-04	k: 1526	n:4970000
Cons ci ratio: 9.289362e-04	ci left: 7.814378e-01	ci right 7.821643e-01	k: 3885552	n:4970000
KS ci ratio: 1.967313e-01	ci left: 7.202297e-05	ci right 8.792526e-05	k: 396	n:4970000
SLC26A11   4970000 perm   10108 sec   (492 perm/sec)   p_kst 7.967807e-05   p_cons 7.818012e-01   p_joint 3.070423e-04

Joint ci ratio: 1.002014e-01	ci left: 2.918319e-04	ci right 3.228101e-04	k: 1529	n:4980000
Cons ci ratio: 9.280271e-04	ci left: 7.814293e-01	ci right 7.821551e-01	k: 3893326	n:4980000
KS ci ratio: 1.962376e-01	ci left: 7.226020e-05	ci right 8.817004e-05	k: 398	n:4980000
SLC26A11   4980000 perm   10147 sec   (491 perm/sec)   p_kst 7.991968e-05   p_cons 7.817924e-01   p_joint 3.070281e-04

Joint ci ratio: 1.000706e-01	ci left: 2.920286e-04	ci right 3.229849e-04	k: 1533	n:4990000
Cons ci ratio: 9.271043e-04	ci left: 7.814269e-01	ci right 7.821519e-01	k: 3901130	n:4990000
KS ci ratio: 1.962376e-01	ci left: 7.211539e-05	ci right 8.799335e-05	k: 398	n:4990000
SLC26A11   4990000 perm   10186 sec   (490 perm/sec)   p_kst 7.975952e-05   p_cons 7.817896e-01   p_joint 3.072144e-04

Joint ci ratio: 1.000706e-01	ci left: 2.914446e-04	ci right 3.223389e-04	k: 1533	n:5000000
Cons ci ratio: 9.261675e-04	ci left: 7.814307e-01	ci right 7.821550e-01	k: 3908965	n:5000000
KS ci ratio: 1.962376e-01	ci left: 7.197116e-05	ci right 8.781736e-05	k: 398	n:5000000
SLC26A11   5000000 perm   10224 sec   (489 perm/sec)   p_kst 7.960000e-05   p_cons 7.817930e-01   p_joint 3.066000e-04

Outputting figure to mutsig2_images.part000000000159/SLC26A11.3_1885_5000000_7.96e-05_0.78179_0.0003066.png
                gene_name: SLC26A11
               theta_stop: 0.20 
                    nperm: 5000000 
                     p_ks: 7.96e-05 
        ci_ks_bounds_left: 7.20e-05 
       ci_ks_bounds_right: 8.78e-05 
                   p_cons: 0.78 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.78 
                  p_joint: 0.00031 
     ci_joint_bounds_left: 0.00029 
    ci_joint_bounds_right: 0.00032 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000159
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 159 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1429>
Subject: Job 8704351: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1429>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000160> was used as the working directory.
Started at Thu Nov 15 19:36:30 2012
Results reported at Thu Nov 15 19:39:44 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000160.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000160.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 160  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000160.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    263.95 sec.
    Max Memory :      5789 MB
    Max Swap   :      8514 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
160
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 160
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 160: processing genes 14385 - 14474
Calculating significance of each gene.
Using projection method.
14385	SLC26A3	1
14386	SLC26A4	1
14387	SLC26A5	1
14388	SLC26A6	1
14389	SLC26A7	1
14390	SLC26A8	1.315718e-01
14391	SLC26A9	3.308507e-01
14392	SLC27A1	1
14393	SLC27A2	1
14394	SLC27A3	1
14395	SLC27A4	3.328516e-02
14396	SLC27A5	1
14397	SLC27A6	1
14398	SLC28A1	1
14399	SLC28A2	1.979091e-01
14400	SLC28A3	1
14401	SLC29A1	1
14402	SLC29A2	1
14403	SLC29A3	1
14404	SLC29A4	1
14405	SLC2A1	1
14406	SLC2A10	1
14407	SLC2A11	1
14408	SLC2A12	1
14409	SLC2A13	1
14410	SLC2A14	9.649295e-02
14411	SLC2A2	1
14412	SLC2A3	1
14413	SLC2A4	1
14414	SLC2A4RG	1
14415	SLC2A5	1
14416	SLC2A6	1
14417	SLC2A7	1
14418	SLC2A8	1
14419	SLC2A9	1.330064e-01
14420	SLC30A1	1
14421	SLC30A10	1
14422	SLC30A2	1
14423	SLC30A3	1
14424	SLC30A4	1
14425	SLC30A5	1
14426	SLC30A6	1
14427	SLC30A7	1
14428	SLC30A8	1
14429	SLC30A9	1
14430	SLC31A1	1
14431	SLC31A2	1
14432	SLC32A1	1
14433	SLC33A1	2.210473e-01
14434	SLC34A1	1
14435	SLC34A2	2.301480e-03
14436	SLC34A3	1
14437	SLC35A1	1
14438	SLC35A2	1
14439	SLC35A3	1
14440	SLC35A4	1
14441	SLC35A5	1
14442	SLC35B1	1.086541e-01
14443	SLC35B2	1
14444	SLC35B3	1
14445	SLC35B4	1
14446	SLC35C1	1
14447	SLC35C2	1
14448	SLC35D1	1
In gene SLC35D2 the following bins exceed PROBCAP:
    THCA-BJ-A28T-TP	categ 4	N = 483     n = 1	mu =   1.36e-07
14449	SLC35D2	2.964991e-02
14450	SLC35D3	1
14451	SLC35E1	1
14452	SLC35E2	1
14453	SLC35E3	1.263267e-01
14454	SLC35E4	1
14455	SLC35F1	3.994528e-02
14456	SLC35F2	1
14457	SLC35F3	1
14458	SLC35F4	1
14459	SLC35F5	1
14460	SLC36A1	1
14461	SLC36A2	1
14462	SLC36A3	1
14463	SLC36A4	1
14464	SLC37A1	1
14465	SLC37A2	1
14466	SLC37A3	1
14467	SLC37A4	1
14468	SLC38A1	1
14469	SLC38A10	1
14470	SLC38A11	1
14471	SLC38A2	1
14472	SLC38A3	1
14473	SLC38A4	9.260822e-03
14474	SLC38A5	1
Done

Running MutSig 2:
Scatter job 160: processing genes 14385 - 14474
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SLC34A2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.567292e-03	ci left: 9.842574e-01	ci right 9.888526e-01	k: 9867	n:10000
Cons ci ratio: 3.613873e-02	ci left: 5.306718e-01	ci right 5.503046e-01	k: 5405	n:10000
KS ci ratio: 2.380899e-02	ci left: 7.216873e-01	ci right 7.391782e-01	k: 7305	n:10000
SLC34A2   10000 perm   2 sec   (5009 perm/sec)   p_kst 7.305000e-01   p_cons 5.405000e-01   p_joint 9.867000e-01

Outputting figure to mutsig2_images.part000000000160/SLC34A2.3_2121_10000_0.7305_0.5405_0.9867.png
                gene_name: SLC34A2
               theta_stop: 0.036 
                    nperm: 10000 
                     p_ks: 0.73 
        ci_ks_bounds_left: 0.72 
       ci_ks_bounds_right: 0.74 
                   p_cons: 0.54 
      ci_cons_bounds_left: 0.53 
     ci_cons_bounds_right: 0.55 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.99 

Current progress: 33 percent done.
SLC27A4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.144643e-01	ci left: 1.289402e-02	ci right 1.779424e-02	k: 152	n:10000
Cons ci ratio: 1.791228e-01	ci left: 4.159407e-02	ci right 4.987317e-02	k: 456	n:10000
KS ci ratio: 1.977666e-01	ci left: 3.405205e-02	ci right 4.162024e-02	k: 377	n:10000
SLC27A4   10000 perm   2 sec   (6338 perm/sec)   p_kst 3.770000e-02   p_cons 4.560000e-02   p_joint 1.520000e-02

Joint ci ratio: 4.012173e-01	ci left: 3.799699e-03	ci right 5.748583e-03	k: 94	n:20000
Cons ci ratio: 1.302097e-01	ci left: 4.052082e-02	ci right 4.621290e-02	k: 866	n:20000
KS ci ratio: 1.428166e-01	ci left: 3.370219e-02	ci right 3.893373e-02	k: 725	n:20000
SLC27A4   20000 perm   4 sec   (5512 perm/sec)   p_kst 3.625000e-02   p_cons 4.330000e-02   p_joint 4.700000e-03

Joint ci ratio: 3.616908e-01	ci left: 3.196122e-03	ci right 4.635909e-03	k: 116	n:30000
Cons ci ratio: 1.067679e-01	ci left: 4.069970e-02	ci right 4.532266e-02	k: 1289	n:30000
KS ci ratio: 1.168330e-01	ci left: 3.404990e-02	ci right 3.830720e-02	k: 1084	n:30000
SLC27A4   30000 perm   6 sec   (5225 perm/sec)   p_kst 3.613333e-02   p_cons 4.296667e-02   p_joint 3.866667e-03

Joint ci ratio: 1.347274e-01	ci left: 1.932710e-02	ci right 2.214308e-02	k: 828	n:40000
Cons ci ratio: 9.263300e-02	ci left: 4.086166e-02	ci right 4.485505e-02	k: 1713	n:40000
KS ci ratio: 1.009156e-01	ci left: 3.451270e-02	ci right 3.820500e-02	k: 1453	n:40000
SLC27A4   40000 perm   8 sec   (5055 perm/sec)   p_kst 3.632500e-02   p_cons 4.282500e-02   p_joint 2.070000e-02

Joint ci ratio: 1.279013e-01	ci left: 1.725941e-02	ci right 1.963697e-02	k: 921	n:50000
Cons ci ratio: 8.320933e-02	ci left: 4.072882e-02	ci right 4.428454e-02	k: 2124	n:50000
KS ci ratio: 9.050765e-02	ci left: 3.452105e-02	ci right 3.781309e-02	k: 1807	n:50000
SLC27A4   50000 perm   10 sec   (4901 perm/sec)   p_kst 3.614000e-02   p_cons 4.248000e-02   p_joint 1.842000e-02

Joint ci ratio: 1.161918e-01	ci left: 1.753393e-02	ci right 1.971298e-02	k: 1116	n:60000
Cons ci ratio: 7.599062e-02	ci left: 4.085062e-02	ci right 4.409383e-02	k: 2547	n:60000
KS ci ratio: 8.267334e-02	ci left: 3.462154e-02	ci right 3.762354e-02	k: 2166	n:60000
SLC27A4   60000 perm   13 sec   (4778 perm/sec)   p_kst 3.610000e-02   p_cons 4.245000e-02   p_joint 1.860000e-02

Joint ci ratio: 8.279588e-02	ci left: 2.974239e-02	ci right 3.232524e-02	k: 2171	n:70000
Cons ci ratio: 7.057302e-02	ci left: 4.072252e-02	ci right 4.371557e-02	k: 2954	n:70000
KS ci ratio: 7.610714e-02	ci left: 3.512288e-02	ci right 3.791571e-02	k: 2555	n:70000
SLC27A4   70000 perm   15 sec   (4664 perm/sec)   p_kst 3.650000e-02   p_cons 4.220000e-02   p_joint 3.101429e-02

Outputting figure to mutsig2_images.part000000000160/SLC27A4.2_1980_70000_0.0365_0.0422_0.031014.png
                gene_name: SLC27A4
               theta_stop: 0.083 
                    nperm: 70000 
                     p_ks: 0.036 
        ci_ks_bounds_left: 0.035 
       ci_ks_bounds_right: 0.038 
                   p_cons: 0.042 
      ci_cons_bounds_left: 0.041 
     ci_cons_bounds_right: 0.044 
                  p_joint: 0.031 
     ci_joint_bounds_left: 0.030 
    ci_joint_bounds_right: 0.032 

Current progress: 67 percent done.
SLC38A4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.274638e-02	ci left: 7.394702e-01	ci right 7.565851e-01	k: 7481	n:10000
KS ci ratio: 4.773191e-02	ci left: 3.930670e-01	ci right 4.123897e-01	k: 4027	n:10000
SLC38A4   10000 perm   2 sec   (5953 perm/sec)   p_kst 4.027000e-01   p_cons 7.481000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000160/SLC38A4.2_1704_10000_0.4027_0.7481_1.png
                gene_name: SLC38A4
               theta_stop: 0.048 
                    nperm: 10000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.39 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.76 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000160
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 160 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1416>
Subject: Job 8704353: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1416>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000161> was used as the working directory.
Started at Thu Nov 15 19:36:37 2012
Results reported at Thu Nov 15 19:39:52 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000161.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000161.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 161  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000161.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    278.02 sec.
    Max Memory :      5707 MB
    Max Swap   :      8445 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
161
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 161
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 161: processing genes 14475 - 14565
Calculating significance of each gene.
Using projection method.
14475	SLC38A6	1
14476	SLC38A7	4.033685e-02
14477	SLC38A8	1
14478	SLC38A9	1
14479	SLC39A1	1
14480	SLC39A10	1
14481	SLC39A11	1
14482	SLC39A12	1
14483	SLC39A13	1
14484	SLC39A14	1.063195e-01
14485	SLC39A2	1.306469e-01
14486	SLC39A3	1
14487	SLC39A4	5.136252e-02
14488	SLC39A5	1
14489	SLC39A6	1
14490	SLC39A7	1.023355e-02
14491	SLC39A8	1
14492	SLC39A9	1
14493	SLC3A1	4.941883e-02
14494	SLC3A2	1
14495	SLC40A1	1
14496	SLC41A1	1
14497	SLC41A2	1
14498	SLC41A3	2.404396e-01
14499	SLC43A1	1
14500	SLC43A2	3.413892e-02
14501	SLC43A3	1
14502	SLC44A1	1
14503	SLC44A2	2.470684e-01
14504	SLC44A3	1
14505	SLC44A4	1
14506	SLC44A5	1
14507	SLC45A1	1
14508	SLC45A2	1
14509	SLC45A3	1
14510	SLC45A4	1
14511	SLC46A1	9.001356e-02
14512	SLC46A2	1
14513	SLC46A3	1
14514	SLC47A1	1
14515	SLC47A2	1
14516	SLC48A1	1
14517	SLC4A1	1
14518	SLC4A10	1
14519	SLC4A11	1
14520	SLC4A1AP	1
14521	SLC4A2	3.946243e-01
14522	SLC4A3	1
14523	SLC4A4	1
14524	SLC4A5	1
14525	SLC4A7	1
14526	SLC4A8	1
14527	SLC4A9	1
14528	SLC5A1	1
14529	SLC5A10	1
14530	SLC5A11	1
14531	SLC5A12	1
14532	SLC5A2	1.383748e-03
14533	SLC5A3	1
14534	SLC5A4	1
14535	SLC5A5	1.505025e-01
14536	SLC5A6	1
14537	SLC5A7	1
14538	SLC5A8	1
14539	SLC5A9	1
14540	SLC6A1	1
14541	SLC6A11	1
14542	SLC6A12	1
14543	SLC6A13	1
14544	SLC6A14	1
14545	SLC6A15	1
14546	SLC6A16	1
14547	SLC6A17	1
14548	SLC6A18	2.084992e-01
14549	SLC6A19	2.184177e-01
14550	SLC6A2	6.599474e-02
14551	SLC6A20	2.399785e-01
14552	SLC6A3	5.223299e-02
14553	SLC6A4	1
14554	SLC6A5	1
14555	SLC6A6	1
14556	SLC6A7	1
14557	SLC6A8	7.203342e-02
14558	SLC6A9	8.171602e-02
14559	SLC7A1	1
14560	SLC7A10	1
14561	SLC7A11	9.460531e-03
14562	SLC7A13	1
14563	SLC7A14	1
14564	SLC7A2	1
14565	SLC7A3	1
Done

Running MutSig 2:
Scatter job 161: processing genes 14475 - 14565
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SLC5A2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.287741e-01	ci left: 7.931430e-02	ci right 9.032897e-02	k: 847	n:10000
Cons ci ratio: 1.988626e-01	ci left: 3.367125e-02	ci right 4.120130e-02	k: 373	n:10000
KS ci ratio: 1.506606e-01	ci left: 5.860517e-02	ci right 6.825107e-02	k: 633	n:10000
SLC5A2   10000 perm   2 sec   (5332 perm/sec)   p_kst 6.330000e-02   p_cons 3.730000e-02   p_joint 8.470000e-02

Joint ci ratio: 1.154500e-01	ci left: 5.134529e-02	ci right 5.768501e-02	k: 1089	n:20000
Cons ci ratio: 1.385177e-01	ci left: 3.582747e-02	ci right 4.120776e-02	k: 769	n:20000
KS ci ratio: 1.071685e-01	ci left: 5.933027e-02	ci right 6.609755e-02	k: 1253	n:20000
SLC5A2   20000 perm   7 sec   (2727 perm/sec)   p_kst 6.265000e-02   p_cons 3.845000e-02   p_joint 5.445000e-02

Joint ci ratio: 1.008266e-01	ci left: 4.554319e-02	ci right 5.041150e-02	k: 1438	n:30000
Cons ci ratio: 1.077314e-01	ci left: 3.998524e-02	ci right 4.457061e-02	k: 1267	n:30000
KS ci ratio: 8.679174e-02	ci left: 6.089684e-02	ci right 6.645470e-02	k: 1909	n:30000
SLC5A2   30000 perm   10 sec   (3075 perm/sec)   p_kst 6.363333e-02   p_cons 4.223333e-02   p_joint 4.793333e-02

Joint ci ratio: 6.916929e-02	ci left: 7.174838e-02	ci right 7.691362e-02	k: 2972	n:40000
Cons ci ratio: 9.349108e-02	ci left: 4.012839e-02	ci right 4.408843e-02	k: 1683	n:40000
KS ci ratio: 7.486110e-02	ci left: 6.174349e-02	ci right 6.657002e-02	k: 2565	n:40000
SLC5A2   40000 perm   12 sec   (3281 perm/sec)   p_kst 6.412500e-02   p_cons 4.207500e-02   p_joint 7.430000e-02

Outputting figure to mutsig2_images.part000000000161/SLC5A2.3_2075_40000_0.064125_0.042075_0.0743.png
                gene_name: SLC5A2
               theta_stop: 0.093 
                    nperm: 40000 
                     p_ks: 0.064 
        ci_ks_bounds_left: 0.062 
       ci_ks_bounds_right: 0.067 
                   p_cons: 0.042 
      ci_cons_bounds_left: 0.040 
     ci_cons_bounds_right: 0.044 
                  p_joint: 0.074 
     ci_joint_bounds_left: 0.072 
    ci_joint_bounds_right: 0.077 

Current progress: 33 percent done.
SLC39A7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.019975e-02	ci left: 3.691794e-01	ci right 3.882913e-01	k: 3787	n:10000
Cons ci ratio: 1.188540e-01	ci left: 9.224042e-02	ci right 1.039949e-01	k: 980	n:10000
KS ci ratio: 1.510206e-02	ci left: 8.640678e-01	ci right 8.773155e-01	k: 8708	n:10000
SLC39A7   10000 perm   2 sec   (6333 perm/sec)   p_kst 8.708000e-01   p_cons 9.800000e-02   p_joint 3.787000e-01

Joint ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
Cons ci ratio: 8.338596e-02	ci left: 9.533591e-02	ci right 1.036809e-01	k: 1989	n:20000
KS ci ratio: 1.086911e-02	ci left: 8.619617e-01	ci right 8.714314e-01	k: 17335	n:20000
SLC39A7   20000 perm   4 sec   (5542 perm/sec)   p_kst 8.667500e-01   p_cons 9.945000e-02   p_joint 1

Outputting figure to mutsig2_images.part000000000161/SLC39A7.2_1438_20000_0.86675_0.09945_1.png
                gene_name: SLC39A7
               theta_stop: 0.083 
                    nperm: 20000 
                     p_ks: 0.87 
        ci_ks_bounds_left: 0.86 
       ci_ks_bounds_right: 0.87 
                   p_cons: 0.099 
      ci_cons_bounds_left: 0.095 
     ci_cons_bounds_right: 0.10 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
SLC7A11
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.327738e-02	ci left: 4.408137e-01	ci right 4.604151e-01	k: 4506	n:10000
Cons ci ratio: 4.321626e-02	ci left: 4.415122e-01	ci right 4.611162e-01	k: 4513	n:10000
KS ci ratio: 6.155970e-02	ci left: 2.795337e-01	ci right 2.973897e-01	k: 2884	n:10000
SLC7A11   10000 perm   2 sec   (6071 perm/sec)   p_kst 2.884000e-01   p_cons 4.513000e-01   p_joint 4.506000e-01

Outputting figure to mutsig2_images.part000000000161/SLC7A11.2_1554_10000_0.2884_0.4513_0.4506.png
                gene_name: SLC7A11
               theta_stop: 0.062 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.45 
     ci_joint_bounds_left: 0.44 
    ci_joint_bounds_right: 0.46 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000161
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 161 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1655>
Subject: Job 8704356: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1655>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000162> was used as the working directory.
Started at Thu Nov 15 19:36:37 2012
Results reported at Thu Nov 15 19:39:06 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000162.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000162.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 162  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000162.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    184.36 sec.
    Max Memory :      5523 MB
    Max Swap   :      8273 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
162
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 162
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 162: processing genes 14566 - 14655
Calculating significance of each gene.
Using projection method.
14566	SLC7A4	1
14567	SLC7A5	1
14568	SLC7A6	1
14569	SLC7A6OS	1
14570	SLC7A7	1
14571	SLC7A8	1
14572	SLC7A9	1
14573	SLC8A1	1.853721e-02
14574	SLC8A2	1
14575	SLC8A3	6.011695e-02
14576	SLC9A1	1
14577	SLC9A10	1
14578	SLC9A11	1
14579	SLC9A2	9.704963e-02
14580	SLC9A3	1
14581	SLC9A3R1	1
14582	SLC9A3R2	1
14583	SLC9A4	2.147994e-01
14584	SLC9A5	1
14585	SLC9A6	2.169027e-01
14586	SLC9A7	1
14587	SLC9A8	1
14588	SLC9A9	2.015232e-01
14589	SLCO1A2	1.435075e-01
14590	SLCO1B1	1
In gene SLCO1B3 the following bins exceed PROBCAP:
    THCA-FY-A2QD-TP	categ 6	N = 2165    n = 1	mu =   3.51e-08
14591	SLCO1B3	5.639807e-02
14592	SLCO1C1	1
14593	SLCO2A1	1
14594	SLCO2B1	2.281110e-01
14595	SLCO3A1	1.499886e-01
14596	SLCO4A1	1
14597	SLCO4C1	1
14598	SLCO5A1	1
14599	SLCO6A1	5.082884e-02
14600	SLFN11	1
14601	SLFN12	1
14602	SLFN12L	1
14603	SLFN13	1
14604	SLFN5	9.808489e-02
14605	SLFNL1	1
14606	SLIT1	2.916865e-01
14607	SLIT2	1.491182e-01
14608	SLIT3	1
14609	SLITRK1	1.443753e-01
14610	SLITRK2	2.992792e-01
14611	SLITRK3	3.927222e-03
14612	SLITRK4	1
14613	SLITRK5	1
14614	SLITRK6	1
14615	SLK	1
14616	SLMAP	1
14617	SLMO1	1
14618	SLMO2	1
14619	SLN	1
14620	SLPI	1
14621	SLTM	1
14622	SLU7	1
14623	SLURP1	1
14624	SMAD1	1
14625	SMAD2	1
14626	SMAD3	1
14627	SMAD4	1
14628	SMAD5	1
14629	SMAD6	1
14630	SMAD7	1
14631	SMAD9	1
14632	SMAGP	1
14633	SMAP1	1
14634	SMAP2	1
14635	SMARCA1	1.463669e-01
14636	SMARCA2	1
14637	SMARCA4	3.026780e-01
14638	SMARCA5	2.081880e-01
14639	SMARCAD1	1
14640	SMARCAL1	2.750247e-01
14641	SMARCB1	1
14642	SMARCC1	1
14643	SMARCC2	3.239276e-01
14644	SMARCD1	1
14645	SMARCD2	1
14646	SMARCD3	1
14647	SMARCE1	1
14648	SMC1A	1
14649	SMC1B	1
14650	SMC2	1
14651	SMC3	2.432822e-01
14652	SMC4	1.712728e-01
14653	SMC5	1
14654	SMC6	1
14655	SMCHD1	4.154575e-01
Done

Running MutSig 2:
Scatter job 162: processing genes 14566 - 14655
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SLITRK3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.096562e-02	ci left: 3.621174e-01	ci right 3.811575e-01	k: 3716	n:10000
Cons ci ratio: 4.152048e-03	ci left: 9.867570e-01	ci right 9.909509e-01	k: 9890	n:10000
KS ci ratio: 7.329722e-02	ci left: 2.141824e-01	ci right 2.305796e-01	k: 2223	n:10000
SLITRK3   10000 perm   2 sec   (5208 perm/sec)   p_kst 2.223000e-01   p_cons 9.890000e-01   p_joint 3.716000e-01

Outputting figure to mutsig2_images.part000000000162/SLITRK3.3_2938_10000_0.2223_0.989_0.3716.png
                gene_name: SLITRK3
               theta_stop: 0.073 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.99 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 0.99 
                  p_joint: 0.37 
     ci_joint_bounds_left: 0.36 
    ci_joint_bounds_right: 0.38 

Current progress: 25 percent done.
SLC8A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 9.536123e-03	ci left: 9.395202e-01	ci right 9.486189e-01	k: 9442	n:10000
KS ci ratio: 7.368076e-02	ci left: 2.124066e-01	ci right 2.287565e-01	k: 2205	n:10000
SLC8A1   10000 perm   2 sec   (5549 perm/sec)   p_kst 2.205000e-01   p_cons 9.442000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000162/SLC8A1.2_3070_10000_0.2205_0.9442_1.png
                gene_name: SLC8A1
               theta_stop: 0.074 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.94 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
SLC8A3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.237110e-02	ci left: 5.848004e-01	ci right 6.041445e-01	k: 5945	n:10000
KS ci ratio: 2.163580e-02	ci left: 7.580813e-01	ci right 7.747632e-01	k: 7665	n:10000
SLC8A3   10000 perm   2 sec   (5671 perm/sec)   p_kst 7.665000e-01   p_cons 5.945000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000162/SLC8A3.2_2923_10000_0.7665_0.5945_1.png
                gene_name: SLC8A3
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.77 
                   p_cons: 0.59 
      ci_cons_bounds_left: 0.58 
     ci_cons_bounds_right: 0.60 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
SLIT2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 9.626139e-03	ci left: 9.384828e-01	ci right 9.476569e-01	k: 9432	n:10000
KS ci ratio: 2.098851e-02	ci left: 7.689140e-01	ci right 7.853243e-01	k: 7772	n:10000
SLIT2   10000 perm   2 sec   (5042 perm/sec)   p_kst 7.772000e-01   p_cons 9.432000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000162/SLIT2.2_4738_10000_0.7772_0.9432_1.png
                gene_name: SLIT2
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.94 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000162
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 162 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1649>
Subject: Job 8704357: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1649>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000163> was used as the working directory.
Started at Thu Nov 15 19:36:43 2012
Results reported at Thu Nov 15 19:38:58 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000163.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000163.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 163  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000163.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    158.79 sec.
    Max Memory :      5462 MB
    Max Swap   :      8228 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
163
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 163
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 163: processing genes 14656 - 14746
Calculating significance of each gene.
Using projection method.
14656	SMCP	1
14657	SMCR7	1
14658	SMCR7L	1
14659	SMCR8	1
14660	SMEK1	1
14661	SMEK2	1
14662	SMG1	4.503213e-01
14663	SMG5	1
14664	SMG6	1
14665	SMG7	3.958790e-01
14666	SMNDC1	1
14667	SMO	1
14668	SMOC1	1
14669	SMOC2	1
14670	SMOX	1
14671	SMPD1	1
14672	SMPD2	4.179518e-02
14673	SMPD3	1
14674	SMPD4	3.287334e-01
14675	SMPDL3A	1.578349e-01
14676	SMPDL3B	1
14677	SMPX	1
14678	SMR3A	1
14679	SMR3B	1
14680	SMS	1
14681	SMTN	1
14682	SMTNL1	1
14683	SMTNL2	5.605613e-02
14684	SMU1	1
14685	SMUG1	5.916650e-02
14686	SMURF1	1
14687	SMURF2	1
14688	SMYD1	1
14689	SMYD2	1
14690	SMYD3	1
14691	SMYD4	1
14692	SMYD5	1
14693	SNAI1	1
14694	SNAI2	5.083447e-02
14695	SNAI3	1
14696	SNAP23	1
14697	SNAP25	1
14698	SNAP29	1
14699	SNAP47	3.093477e-02
14700	SNAP91	3.547122e-02
14701	SNAPC1	1
14702	SNAPC2	1
14703	SNAPC3	1
14704	SNAPC4	3.736331e-01
14705	SNAPC5	1
14706	SNAPIN	1
14707	SNCA	1
14708	SNCAIP	1
14709	SNCB	1
14710	SNCG	1
14711	SND1	1
14712	SNED1	1
14713	SNF8	1.089033e-01
14714	SNHG3-RCC1	1
14715	SNIP1	1
14716	SNN	1
14717	SNPH	1
14718	SNRK	1
14719	SNRNP200	1
14720	SNRNP25	1
14721	SNRNP27	1
14722	SNRNP35	4.626635e-02
14723	SNRNP40	1
14724	SNRNP48	1
In gene SNRNP70 the following bins exceed PROBCAP:
    THCA-ET-A39T-TP	categ 6	N = 602     n = 1	mu =   6.87e-08
14725	SNRNP70	1.654871e-02
14726	SNRPA	1
14727	SNRPA1	1
14728	SNRPB	1
14729	SNRPB2	1
14730	SNRPC	1
14731	SNRPD1	1
14732	SNRPD2	1
14733	SNRPD3	1
14734	SNRPE	1
14735	SNRPF	1
14736	SNRPG	1
14737	SNRPN	1
14738	SNTA1	1
14739	SNTB1	1
14740	SNTB2	1
14741	SNTG1	1
14742	SNTG2	1
14743	SNTN	1
14744	SNUPN	1
14745	SNURF	1
14746	SNW1	1
Done

Running MutSig 2:
Scatter job 163: processing genes 14656 - 14746
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000163
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 163 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1730>
Subject: Job 8704359: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1730>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000164> was used as the working directory.
Started at Thu Nov 15 19:36:43 2012
Results reported at Thu Nov 15 22:16:04 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000164.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000164.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 164  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000164.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   9282.33 sec.
    Max Memory :      5832 MB
    Max Swap   :      8583 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
164
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 164
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 164: processing genes 14747 - 14836
Calculating significance of each gene.
Using projection method.
14747	SNX1	1
14748	SNX10	1
14749	SNX11	4.565208e-02
14750	SNX12	1
14751	SNX13	8.743244e-02
14752	SNX14	1
14753	SNX15	1
14754	SNX16	1
14755	SNX17	1
14756	SNX18	1.463532e-01
14757	SNX19	1
14758	SNX2	1.569352e-01
14759	SNX20	1
14760	SNX21	1
14761	SNX22	1
14762	SNX24	1
14763	SNX25	1
In gene SNX27 the following bins exceed PROBCAP:
    THCA-BJ-A28R-TP	categ 6	N = 1443    n = 1	mu =   6.72e-08
14764	SNX27	4.977836e-02
14765	SNX29	1
14766	SNX3	3.947569e-02
14767	SNX30	1
14768	SNX31	1
14769	SNX32	1
14770	SNX33	1
14771	SNX4	1
14772	SNX5	1
14773	SNX6	1
14774	SNX7	5.929686e-02
14775	SNX8	1
14776	SNX9	1
14777	SOAT1	2.138160e-01
14778	SOAT2	1
14779	SOBP	1.466670e-01
14780	SOCS1	1
14781	SOCS2	1
14782	SOCS3	1
14783	SOCS4	1
14784	SOCS5	1
14785	SOCS6	1
14786	SOCS7	1
14787	SOD1	1
14788	SOD2	1
14789	SOD3	1
14790	SOHLH1	1
14791	SOHLH2	1
In gene SOLH the following bins exceed PROBCAP:
    THCA-E3-A3E3-TP	categ 6	N = 1571    n = 1	mu =   1.76e-07
14792	SOLH	3.350847e-02
14793	SON	1
14794	SORBS1	1
14795	SORBS2	1
14796	SORBS3	1.880734e-01
14797	SORCS1	1
14798	SORCS2	1
14799	SORCS3	1.623090e-01
14800	SORD	1
14801	SORL1	4.213977e-01
14802	SORT1	1
14803	SOS1	3.343182e-01
14804	SOS2	1
14805	SOST	1
14806	SOSTDC1	1
14807	SOX1	1
14808	SOX10	1
14809	SOX11	1
14810	SOX12	1
14811	SOX13	1
14812	SOX14	1
14813	SOX15	1
14814	SOX17	1
14815	SOX18	1
14816	SOX2	4.803451e-02
In gene SOX21 the following bins exceed PROBCAP:
    THCA-DE-A3KN-TP	categ 6	N = 332     n = 1	mu =   1.00e-07
14817	SOX21	1.341790e-02
14818	SOX3	1
14819	SOX30	2.373709e-01
In gene SOX4 the following bins exceed PROBCAP:
    THCA-EL-A3CW-TP	categ 6	N = 466     n = 1	mu =   1.02e-07
14820	SOX4	2.189899e-02
14821	SOX5	1
14822	SOX6	1
14823	SOX7	1
14824	SOX8	1
14825	SOX9	1
14826	SP1	2.594624e-01
14827	SP100	1
14828	SP110	1
14829	SP140	2.375474e-01
14830	SP140L	1.431433e-02
14831	SP2	1
14832	SP3	1
In gene SP4 the following bins exceed PROBCAP:
    THCA-E3-A3E3-TP	categ 6	N = 2248    n = 1	mu =   1.76e-07
14833	SP4	1.786401e-02
14834	SP5	1
14835	SP6	1
14836	SP7	1
Done

Running MutSig 2:
Scatter job 164: processing genes 14747 - 14836
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SOLH
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.130871e+00	ci left: 5.492399e-04	ci right 1.967349e-03	k: 11	n:10000
Cons ci ratio: 1.458116e-02	ci left: 8.719362e-01	ci right 8.848425e-01	k: 8785	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
SOLH   10000 perm   2 sec   (5363 perm/sec)   p_kst 1.000000e-04   p_cons 8.785000e-01   p_joint 1.100000e-03

Joint ci ratio: 1.181570e+00	ci left: 2.397946e-04	ci right 9.193249e-04	k: 10	n:20000
Cons ci ratio: 1.037445e-02	ci left: 8.725207e-01	ci right 8.816694e-01	k: 17543	n:20000
KS ci ratio: 1.752814e+00	ci left: 5.449587e-05	ci right 5.119995e-04	k: 4	n:20000
SOLH   20000 perm   7 sec   (2967 perm/sec)   p_kst 2.000000e-04   p_cons 8.771500e-01   p_joint 5.000000e-04

Joint ci ratio: 7.836602e-01	ci left: 5.126402e-04	ci right 1.190104e-03	k: 24	n:30000
Cons ci ratio: 8.387040e-03	ci left: 8.755263e-01	ci right 8.829334e-01	k: 26378	n:30000
KS ci ratio: 1.385721e+00	ci left: 9.381708e-05	ci right 4.806964e-04	k: 7	n:30000
SOLH   30000 perm   14 sec   (2159 perm/sec)   p_kst 2.333333e-04   p_cons 8.792667e-01   p_joint 8.000000e-04

Joint ci ratio: 5.906298e-01	ci left: 7.780887e-04	ci right 1.447748e-03	k: 43	n:40000
Cons ci ratio: 7.576827e-03	ci left: 8.666649e-01	ci right 8.732813e-01	k: 34800	n:40000
KS ci ratio: 1.131423e+00	ci left: 1.372867e-04	ci right 4.919976e-04	k: 11	n:40000
SOLH   40000 perm   18 sec   (2227 perm/sec)   p_kst 2.750000e-04   p_cons 8.700000e-01   p_joint 1.075000e-03

Joint ci ratio: 7.541931e-01	ci left: 3.397085e-04	ci right 7.618283e-04	k: 26	n:50000
Cons ci ratio: 6.803794e-03	ci left: 8.661121e-01	ci right 8.720449e-01	k: 43455	n:50000
KS ci ratio: 1.011978e+00	ci left: 1.530868e-04	ci right 4.697478e-04	k: 14	n:50000
SOLH   50000 perm   22 sec   (2226 perm/sec)   p_kst 2.800000e-04   p_cons 8.691000e-01   p_joint 5.200000e-04

Joint ci ratio: 7.277437e-01	ci left: 3.101183e-04	ci right 6.743932e-04	k: 28	n:60000
Cons ci ratio: 6.218681e-03	ci left: 8.660892e-01	ci right 8.715084e-01	k: 52129	n:60000
KS ci ratio: 9.798612e-01	ci left: 1.399296e-04	ci right 4.123035e-04	k: 15	n:60000
SOLH   60000 perm   25 sec   (2432 perm/sec)   p_kst 2.500000e-04   p_cons 8.688167e-01   p_joint 4.666667e-04

Joint ci ratio: 6.822187e-01	ci left: 3.127057e-04	ci right 6.452886e-04	k: 32	n:70000
Cons ci ratio: 5.792002e-03	ci left: 8.649085e-01	ci right 8.699467e-01	k: 60721	n:70000
KS ci ratio: 8.991812e-01	ci left: 1.524060e-04	ci right 4.063662e-04	k: 18	n:70000
SOLH   70000 perm   27 sec   (2595 perm/sec)   p_kst 2.571429e-04   p_cons 8.674429e-01   p_joint 4.571429e-04

Joint ci ratio: 6.442910e-01	ci left: 3.151937e-04	ci right 6.229358e-04	k: 36	n:80000
Cons ci ratio: 5.435392e-03	ci left: 8.643251e-01	ci right 8.690483e-01	k: 69336	n:80000
KS ci ratio: 8.552965e-01	ci left: 1.527130e-04	ci right 3.860784e-04	k: 20	n:80000
SOLH   80000 perm   29 sec   (2716 perm/sec)   p_kst 2.500000e-04   p_cons 8.667000e-01   p_joint 4.500000e-04

Joint ci ratio: 6.120583e-01	ci left: 3.175360e-04	ci right 6.051585e-04	k: 40	n:90000
Cons ci ratio: 5.130437e-03	ci left: 8.641935e-01	ci right 8.686496e-01	k: 77979	n:90000
KS ci ratio: 8.000555e-01	ci left: 1.620070e-04	ci right 3.834343e-04	k: 23	n:90000
SOLH   90000 perm   36 sec   (2494 perm/sec)   p_kst 2.555556e-04   p_cons 8.664333e-01   p_joint 4.444444e-04

Joint ci ratio: 5.976629e-01	ci left: 3.027153e-04	ci right 5.676761e-04	k: 42	n:100000
Cons ci ratio: 4.864066e-03	ci left: 8.644569e-01	ci right 8.686818e-01	k: 86658	n:100000
KS ci ratio: 7.542987e-01	ci left: 1.698474e-04	ci right 3.809372e-04	k: 26	n:100000
SOLH   100000 perm   39 sec   (2574 perm/sec)   p_kst 2.600000e-04   p_cons 8.665800e-01   p_joint 4.200000e-04

Joint ci ratio: 5.542432e-01	ci left: 3.295673e-04	ci right 5.888723e-04	k: 49	n:110000
Cons ci ratio: 4.630001e-03	ci left: 8.649425e-01	ci right 8.689654e-01	k: 95366	n:110000
KS ci ratio: 6.822789e-01	ci left: 1.989898e-04	ci right 4.106522e-04	k: 32	n:110000
SOLH   110000 perm   42 sec   (2636 perm/sec)   p_kst 2.909091e-04   p_cons 8.669636e-01   p_joint 4.454545e-04

Joint ci ratio: 5.333222e-01	ci left: 3.308556e-04	ci right 5.776716e-04	k: 53	n:120000
Cons ci ratio: 4.437628e-03	ci left: 8.647806e-01	ci right 8.686350e-01	k: 104006	n:120000
KS ci ratio: 6.443420e-01	ci left: 2.101249e-04	ci right 4.153025e-04	k: 36	n:120000
SOLH   120000 perm   44 sec   (2707 perm/sec)   p_kst 3.000000e-04   p_cons 8.667167e-01   p_joint 4.416667e-04

Joint ci ratio: 5.237172e-01	ci left: 3.187348e-04	ci right 5.506576e-04	k: 55	n:130000
Cons ci ratio: 4.263554e-03	ci left: 8.648558e-01	ci right 8.685586e-01	k: 112673	n:130000
KS ci ratio: 6.358126e-01	ci left: 2.004032e-04	ci right 3.922837e-04	k: 37	n:130000
SOLH   130000 perm   47 sec   (2762 perm/sec)   p_kst 2.846154e-04   p_cons 8.667154e-01   p_joint 4.230769e-04

Joint ci ratio: 4.977285e-01	ci left: 3.333028e-04	ci right 5.596585e-04	k: 61	n:140000
Cons ci ratio: 3.958430e-03	ci left: 8.733353e-01	ci right 8.768063e-01	k: 122511	n:140000
KS ci ratio: 6.121093e-01	ci left: 2.041261e-04	ci right 3.890417e-04	k: 40	n:140000
SOLH   140000 perm   50 sec   (2796 perm/sec)   p_kst 2.857143e-04   p_cons 8.750786e-01   p_joint 4.357143e-04

Joint ci ratio: 5.018008e-01	ci left: 3.052556e-04	ci right 5.148497e-04	k: 60	n:150000
Cons ci ratio: 3.828492e-03	ci left: 8.731482e-01	ci right 8.765040e-01	k: 131225	n:150000
KS ci ratio: 6.047824e-01	ci left: 1.961556e-04	ci right 3.707895e-04	k: 41	n:150000
SOLH   150000 perm   53 sec   (2831 perm/sec)   p_kst 2.733333e-04   p_cons 8.748333e-01   p_joint 4.000000e-04

Joint ci ratio: 4.899005e-01	ci left: 3.025812e-04	ci right 5.037496e-04	k: 63	n:160000
Cons ci ratio: 3.701980e-03	ci left: 8.734953e-01	ci right 8.767411e-01	k: 140020	n:160000
KS ci ratio: 5.977122e-01	ci left: 1.891933e-04	ci right 3.548074e-04	k: 42	n:160000
SOLH   160000 perm   56 sec   (2863 perm/sec)   p_kst 2.625000e-04   p_cons 8.751250e-01   p_joint 3.937500e-04

Joint ci ratio: 4.651199e-01	ci left: 3.210044e-04	ci right 5.202117e-04	k: 70	n:170000
Cons ci ratio: 3.587215e-03	ci left: 8.738030e-01	ci right 8.769489e-01	k: 148815	n:170000
KS ci ratio: 5.842800e-01	ci left: 1.880677e-04	ci right 3.474431e-04	k: 44	n:170000
SOLH   170000 perm   59 sec   (2883 perm/sec)   p_kst 2.588235e-04   p_cons 8.753824e-01   p_joint 4.117647e-04

Joint ci ratio: 4.651254e-01	ci left: 3.031701e-04	ci right 4.913125e-04	k: 70	n:180000
Cons ci ratio: 3.482311e-03	ci left: 8.740888e-01	ci right 8.771435e-01	k: 157612	n:180000
KS ci ratio: 5.657262e-01	ci left: 1.918607e-04	ci right 3.472075e-04	k: 47	n:180000
SOLH   180000 perm   62 sec   (2906 perm/sec)   p_kst 2.611111e-04   p_cons 8.756222e-01   p_joint 3.888889e-04

Joint ci ratio: 4.381759e-01	ci left: 3.291978e-04	ci right 5.181712e-04	k: 79	n:190000
Cons ci ratio: 3.394443e-03	ci left: 8.738061e-01	ci right 8.767824e-01	k: 166307	n:190000
KS ci ratio: 5.435304e-01	ci left: 1.998634e-04	ci right 3.529092e-04	k: 51	n:190000
SOLH   190000 perm   65 sec   (2920 perm/sec)   p_kst 2.684211e-04   p_cons 8.753000e-01   p_joint 4.157895e-04

Joint ci ratio: 4.226125e-01	ci left: 3.394886e-04	ci right 5.254927e-04	k: 85	n:200000
Cons ci ratio: 3.308189e-03	ci left: 8.738642e-01	ci right 8.767649e-01	k: 175064	n:200000
KS ci ratio: 5.237574e-01	ci left: 2.071741e-04	ci right 3.579355e-04	k: 55	n:200000
SOLH   200000 perm   69 sec   (2904 perm/sec)   p_kst 2.750000e-04   p_cons 8.753200e-01   p_joint 4.250000e-04

Joint ci ratio: 4.108376e-01	ci left: 3.446357e-04	ci right 5.267612e-04	k: 90	n:210000
Cons ci ratio: 3.224529e-03	ci left: 8.741665e-01	ci right 8.769945e-01	k: 183873	n:210000
KS ci ratio: 5.059963e-01	ci left: 2.138806e-04	ci right 3.623933e-04	k: 59	n:210000
SOLH   210000 perm   74 sec   (2839 perm/sec)   p_kst 2.809524e-04   p_cons 8.755857e-01   p_joint 4.285714e-04

Joint ci ratio: 4.108417e-01	ci left: 3.289698e-04	ci right 5.028186e-04	k: 90	n:220000
Cons ci ratio: 3.149264e-03	ci left: 8.742776e-01	ci right 8.770398e-01	k: 192646	n:220000
KS ci ratio: 4.861432e-01	ci left: 2.240424e-04	ci right 3.714694e-04	k: 64	n:220000
SOLH   220000 perm   77 sec   (2846 perm/sec)   p_kst 2.909091e-04   p_cons 8.756636e-01   p_joint 4.090909e-04

Joint ci ratio: 3.919139e-01	ci left: 3.498495e-04	ci right 5.240144e-04	k: 99	n:230000
Cons ci ratio: 3.076695e-03	ci left: 8.745457e-01	ci right 8.772448e-01	k: 201457	n:230000
KS ci ratio: 4.651456e-01	ci left: 2.372615e-04	ci right 3.845098e-04	k: 70	n:230000
SOLH   230000 perm   82 sec   (2805 perm/sec)   p_kst 3.043478e-04   p_cons 8.759000e-01   p_joint 4.304348e-04

Joint ci ratio: 3.843035e-01	ci left: 3.503128e-04	ci right 5.204656e-04	k: 103	n:240000
Cons ci ratio: 3.011741e-03	ci left: 8.745869e-01	ci right 8.772290e-01	k: 210219	n:240000
KS ci ratio: 4.556195e-01	ci left: 2.384255e-04	ci right 3.824289e-04	k: 73	n:240000
SOLH   240000 perm   86 sec   (2803 perm/sec)   p_kst 3.041667e-04   p_cons 8.759125e-01   p_joint 4.291667e-04

Joint ci ratio: 3.638777e-01	ci left: 3.797917e-04	ci right 5.521349e-04	k: 115	n:250000
Cons ci ratio: 2.951603e-03	ci left: 8.745611e-01	ci right 8.771502e-01	k: 218965	n:250000
KS ci ratio: 4.495856e-01	ci left: 2.359761e-04	ci right 3.760383e-04	k: 75	n:250000
SOLH   250000 perm   89 sec   (2805 perm/sec)   p_kst 3.000000e-04   p_cons 8.758600e-01   p_joint 4.600000e-04

Joint ci ratio: 3.519418e-01	ci left: 3.931881e-04	ci right 5.644220e-04	k: 123	n:260000
Cons ci ratio: 2.895339e-03	ci left: 8.745068e-01	ci right 8.770463e-01	k: 227703	n:260000
KS ci ratio: 4.328225e-01	ci left: 2.474140e-04	ci right 3.871992e-04	k: 81	n:260000
SOLH   260000 perm   93 sec   (2805 perm/sec)   p_kst 3.115385e-04   p_cons 8.757808e-01   p_joint 4.730769e-04

Joint ci ratio: 3.463995e-01	ci left: 3.921412e-04	ci right 5.596265e-04	k: 127	n:270000
Cons ci ratio: 2.840577e-03	ci left: 8.745798e-01	ci right 8.770713e-01	k: 236474	n:270000
KS ci ratio: 4.302090e-01	ci left: 2.415516e-04	ci right 3.769626e-04	k: 82	n:270000
SOLH   270000 perm   96 sec   (2803 perm/sec)   p_kst 3.037037e-04   p_cons 8.758296e-01   p_joint 4.703704e-04

Joint ci ratio: 3.385548e-01	ci left: 3.977222e-04	ci right 5.629039e-04	k: 133	n:280000
Cons ci ratio: 2.791647e-03	ci left: 8.744257e-01	ci right 8.768737e-01	k: 245183	n:280000
KS ci ratio: 4.202021e-01	ci left: 2.456818e-04	ci right 3.793052e-04	k: 86	n:280000
SOLH   280000 perm   100 sec   (2800 perm/sec)   p_kst 3.071429e-04   p_cons 8.756536e-01   p_joint 4.750000e-04

Joint ci ratio: 3.300427e-01	ci left: 4.061203e-04	ci right 5.696493e-04	k: 140	n:290000
Cons ci ratio: 2.743550e-03	ci left: 8.744106e-01	ci right 8.768163e-01	k: 253929	n:290000
KS ci ratio: 4.108625e-01	ci left: 2.495610e-04	ci right 3.814529e-04	k: 90	n:290000
SOLH   290000 perm   107 sec   (2718 perm/sec)   p_kst 3.103448e-04   p_cons 8.756172e-01   p_joint 4.827586e-04

Joint ci ratio: 3.373034e-01	ci left: 3.742571e-04	ci right 5.289935e-04	k: 134	n:300000
Cons ci ratio: 2.695503e-03	ci left: 8.745877e-01	ci right 8.769517e-01	k: 262732	n:300000
KS ci ratio: 4.042531e-01	ci left: 2.502171e-04	ci right 3.797577e-04	k: 93	n:300000
SOLH   300000 perm   111 sec   (2713 perm/sec)   p_kst 3.100000e-04   p_cons 8.757733e-01   p_joint 4.466667e-04

Joint ci ratio: 3.312251e-01	ci left: 3.769599e-04	ci right 5.294068e-04	k: 139	n:310000
Cons ci ratio: 2.650913e-03	ci left: 8.746695e-01	ci right 8.769944e-01	k: 271509	n:310000
KS ci ratio: 4.000207e-01	ci left: 2.479445e-04	ci right 3.746084e-04	k: 95	n:310000
SOLH   310000 perm   115 sec   (2707 perm/sec)   p_kst 3.064516e-04   p_cons 8.758355e-01   p_joint 4.483871e-04

Joint ci ratio: 3.277331e-01	ci left: 3.737794e-04	ci right 5.230108e-04	k: 142	n:320000
Cons ci ratio: 2.610376e-03	ci left: 8.745864e-01	ci right 8.768755e-01	k: 280235	n:320000
KS ci ratio: 3.959185e-01	ci left: 2.458206e-04	ci right 3.697745e-04	k: 97	n:320000
SOLH   320000 perm   119 sec   (2700 perm/sec)   p_kst 3.031250e-04   p_cons 8.757344e-01   p_joint 4.437500e-04

Joint ci ratio: 3.232436e-01	ci left: 3.735837e-04	ci right 5.202701e-04	k: 146	n:330000
Cons ci ratio: 2.571642e-03	ci left: 8.745087e-01	ci right 8.767635e-01	k: 288961	n:330000
KS ci ratio: 3.919400e-01	ci left: 2.438317e-04	ci right 3.652273e-04	k: 99	n:330000
SOLH   330000 perm   123 sec   (2694 perm/sec)   p_kst 3.000000e-04   p_cons 8.756394e-01   p_joint 4.424242e-04

Joint ci ratio: 3.168414e-01	ci left: 3.788258e-04	ci right 5.240276e-04	k: 152	n:340000
Cons ci ratio: 2.532014e-03	ci left: 8.746572e-01	ci right 8.768776e-01	k: 297762	n:340000
KS ci ratio: 3.843283e-01	ci left: 2.472769e-04	ci right 3.673924e-04	k: 103	n:340000
SOLH   340000 perm   127 sec   (2685 perm/sec)   p_kst 3.029412e-04   p_cons 8.757706e-01   p_joint 4.470588e-04

Joint ci ratio: 3.137808e-01	ci left: 3.758953e-04	ci right 5.183030e-04	k: 155	n:350000
Cons ci ratio: 2.495931e-03	ci left: 8.746426e-01	ci right 8.768312e-01	k: 306509	n:350000
KS ci ratio: 3.806859e-01	ci left: 2.453766e-04	ci right 3.631568e-04	k: 105	n:350000
SOLH   350000 perm   131 sec   (2673 perm/sec)   p_kst 3.000000e-04   p_cons 8.757400e-01   p_joint 4.428571e-04

Joint ci ratio: 3.108071e-01	ci left: 3.731340e-04	ci right 5.128902e-04	k: 158	n:360000
Cons ci ratio: 2.460248e-03	ci left: 8.747266e-01	ci right 8.768840e-01	k: 315291	n:360000
KS ci ratio: 3.754105e-01	ci left: 2.461021e-04	ci right 3.621907e-04	k: 108	n:360000
SOLH   360000 perm   135 sec   (2661 perm/sec)   p_kst 3.000000e-04   p_cons 8.758083e-01   p_joint 4.388889e-04

Joint ci ratio: 3.069700e-01	ci left: 3.730223e-04	ci right 5.106744e-04	k: 162	n:370000
Cons ci ratio: 2.426987e-03	ci left: 8.747222e-01	ci right 8.768503e-01	k: 324042	n:370000
KS ci ratio: 3.720136e-01	ci left: 2.443484e-04	ci right 3.583127e-04	k: 110	n:370000
SOLH   370000 perm   140 sec   (2641 perm/sec)   p_kst 2.972973e-04   p_cons 8.757892e-01   p_joint 4.378378e-04

Joint ci ratio: 3.023673e-01	ci left: 3.753582e-04	ci right 5.113962e-04	k: 167	n:380000
Cons ci ratio: 2.394344e-03	ci left: 8.747815e-01	ci right 8.768812e-01	k: 332817	n:380000
KS ci ratio: 3.654861e-01	ci left: 2.474692e-04	ci right 3.603808e-04	k: 114	n:380000
SOLH   380000 perm   145 sec   (2629 perm/sec)   p_kst 3.000000e-04   p_cons 8.758342e-01   p_joint 4.394737e-04

Joint ci ratio: 2.979656e-01	ci left: 3.775888e-04	ci right 5.120664e-04	k: 172	n:390000
Cons ci ratio: 2.363234e-03	ci left: 8.748149e-01	ci right 8.768872e-01	k: 341583	n:390000
KS ci ratio: 3.592905e-01	ci left: 2.504465e-04	ci right 3.623264e-04	k: 118	n:390000
SOLH   390000 perm   149 sec   (2618 perm/sec)   p_kst 3.025641e-04   p_cons 8.758538e-01   p_joint 4.410256e-04

Joint ci ratio: 2.954157e-01	ci left: 3.750909e-04	ci right 5.073215e-04	k: 175	n:400000
Cons ci ratio: 2.333521e-03	ci left: 8.748266e-01	ci right 8.768729e-01	k: 350341	n:400000
KS ci ratio: 3.563093e-01	ci left: 2.487359e-04	ci right 3.587159e-04	k: 120	n:400000
SOLH   400000 perm   153 sec   (2606 perm/sec)   p_kst 3.000000e-04   p_cons 8.758525e-01   p_joint 4.375000e-04

Joint ci ratio: 2.929302e-01	ci left: 3.727194e-04	ci right 5.028034e-04	k: 178	n:410000
Cons ci ratio: 2.305056e-03	ci left: 8.748233e-01	ci right 8.768445e-01	k: 359093	n:410000
KS ci ratio: 3.519727e-01	ci left: 2.493353e-04	ci right 3.579321e-04	k: 123	n:410000
SOLH   410000 perm   158 sec   (2593 perm/sec)   p_kst 3.000000e-04   p_cons 8.758366e-01   p_joint 4.341463e-04

Joint ci ratio: 2.865946e-01	ci left: 3.815090e-04	ci right 5.112595e-04	k: 186	n:420000
Cons ci ratio: 2.277409e-03	ci left: 8.748394e-01	ci right 8.768364e-01	k: 367853	n:420000
KS ci ratio: 3.437531e-01	ci left: 2.564367e-04	ci right 3.649385e-04	k: 129	n:420000
SOLH   420000 perm   163 sec   (2579 perm/sec)   p_kst 3.071429e-04   p_cons 8.758405e-01   p_joint 4.428571e-04

Joint ci ratio: 2.806530e-01	ci left: 3.899185e-04	ci right 5.192937e-04	k: 194	n:430000
Cons ci ratio: 2.252682e-03	ci left: 8.746659e-01	ci right 8.766407e-01	k: 376532	n:430000
KS ci ratio: 3.360837e-01	ci left: 2.632359e-04	ci right 3.715912e-04	k: 135	n:430000
SOLH   430000 perm   168 sec   (2561 perm/sec)   p_kst 3.139535e-04   p_cons 8.756558e-01   p_joint 4.511628e-04

Joint ci ratio: 2.771225e-01	ci left: 3.916257e-04	ci right 5.196478e-04	k: 199	n:440000
Cons ci ratio: 2.228273e-03	ci left: 8.745460e-01	ci right 8.764991e-01	k: 385231	n:440000
KS ci ratio: 3.324372e-01	ci left: 2.634993e-04	ci right 3.705343e-04	k: 138	n:440000
SOLH   440000 perm   173 sec   (2546 perm/sec)   p_kst 3.136364e-04   p_cons 8.755250e-01   p_joint 4.522727e-04

Joint ci ratio: 2.750677e-01	ci left: 3.891280e-04	ci right 5.152272e-04	k: 202	n:450000
Cons ci ratio: 2.203763e-03	ci left: 8.745185e-01	ci right 8.764500e-01	k: 393969	n:450000
KS ci ratio: 3.289068e-01	ci left: 2.637570e-04	ci right 3.695183e-04	k: 141	n:450000
SOLH   450000 perm   178 sec   (2533 perm/sec)   p_kst 3.133333e-04   p_cons 8.754867e-01   p_joint 4.488889e-04

Joint ci ratio: 2.710902e-01	ci left: 3.928194e-04	ci right 5.179608e-04	k: 208	n:460000
Cons ci ratio: 2.181043e-03	ci left: 8.743920e-01	ci right 8.763033e-01	k: 402661	n:460000
KS ci ratio: 3.232641e-01	ci left: 2.680032e-04	ci right 3.732414e-04	k: 146	n:460000
SOLH   460000 perm   183 sec   (2520 perm/sec)   p_kst 3.173913e-04   p_cons 8.753500e-01   p_joint 4.521739e-04

Joint ci ratio: 2.691657e-01	ci left: 3.904122e-04	ci right 5.137547e-04	k: 211	n:470000
Cons ci ratio: 2.158021e-03	ci left: 8.743713e-01	ci right 8.762624e-01	k: 411400	n:470000
KS ci ratio: 3.232652e-01	ci left: 2.623009e-04	ci right 3.653003e-04	k: 146	n:470000
SOLH   470000 perm   188 sec   (2506 perm/sec)   p_kst 3.106383e-04   p_cons 8.753191e-01   p_joint 4.489362e-04

Joint ci ratio: 2.648283e-01	ci left: 3.958860e-04	ci right 5.186084e-04	k: 218	n:480000
Cons ci ratio: 2.135794e-03	ci left: 8.743433e-01	ci right 8.762147e-01	k: 420135	n:480000
KS ci ratio: 3.200163e-01	ci left: 2.625817e-04	ci right 3.644427e-04	k: 149	n:480000
SOLH   480000 perm   193 sec   (2492 perm/sec)   p_kst 3.104167e-04   p_cons 8.752813e-01   p_joint 4.541667e-04

Joint ci ratio: 2.630333e-01	ci left: 3.935241e-04	ci right 5.145512e-04	k: 221	n:490000
Cons ci ratio: 2.113350e-03	ci left: 8.744086e-01	ci right 8.762605e-01	k: 428915	n:490000
KS ci ratio: 3.189556e-01	ci left: 2.591000e-04	ci right 3.592092e-04	k: 150	n:490000
SOLH   490000 perm   198 sec   (2478 perm/sec)   p_kst 3.061224e-04   p_cons 8.753367e-01   p_joint 4.510204e-04

Joint ci ratio: 2.618571e-01	ci left: 3.893903e-04	ci right 5.085229e-04	k: 223	n:500000
Cons ci ratio: 2.091752e-03	ci left: 8.744553e-01	ci right 8.762883e-01	k: 437687	n:500000
KS ci ratio: 3.179053e-01	ci left: 2.557581e-04	ci right 3.541844e-04	k: 151	n:500000
SOLH   500000 perm   203 sec   (2462 perm/sec)   p_kst 3.020000e-04   p_cons 8.753740e-01   p_joint 4.460000e-04

Joint ci ratio: 2.601214e-01	ci left: 3.872527e-04	ci right 5.048183e-04	k: 226	n:510000
Cons ci ratio: 2.071864e-03	ci left: 8.743882e-01	ci right 8.762036e-01	k: 446402	n:510000
KS ci ratio: 3.168654e-01	ci left: 2.525478e-04	ci right 3.493562e-04	k: 152	n:510000
SOLH   510000 perm   210 sec   (2433 perm/sec)   p_kst 2.980392e-04   p_cons 8.752980e-01   p_joint 4.431373e-04

Joint ci ratio: 2.556546e-01	ci left: 3.941960e-04	ci right 5.114868e-04	k: 234	n:520000
Cons ci ratio: 2.050019e-03	ci left: 8.745919e-01	ci right 8.763885e-01	k: 455256	n:520000
KS ci ratio: 3.098552e-01	ci left: 2.600944e-04	ci right 3.571542e-04	k: 159	n:520000
SOLH   520000 perm   219 sec   (2376 perm/sec)   p_kst 3.057692e-04   p_cons 8.754923e-01   p_joint 4.500000e-04

Joint ci ratio: 2.545742e-01	ci left: 3.902906e-04	ci right 5.058506e-04	k: 236	n:530000
Cons ci ratio: 2.030920e-03	ci left: 8.745646e-01	ci right 8.763445e-01	k: 463992	n:530000
KS ci ratio: 3.079369e-01	ci left: 2.586681e-04	ci right 3.544806e-04	k: 161	n:530000
SOLH   530000 perm   224 sec   (2364 perm/sec)   p_kst 3.037736e-04   p_cons 8.754566e-01   p_joint 4.452830e-04

Joint ci ratio: 2.535074e-01	ci left: 3.865308e-04	ci right 5.004222e-04	k: 238	n:540000
Cons ci ratio: 2.012310e-03	ci left: 8.745422e-01	ci right 8.763056e-01	k: 472730	n:540000
KS ci ratio: 3.060538e-01	ci left: 2.572963e-04	ci right 3.519044e-04	k: 163	n:540000
SOLH   540000 perm   230 sec   (2351 perm/sec)   p_kst 3.018519e-04   p_cons 8.754259e-01   p_joint 4.407407e-04

Joint ci ratio: 2.498739e-01	ci left: 3.914276e-04	ci right 5.048518e-04	k: 245	n:550000
Cons ci ratio: 1.993188e-03	ci left: 8.746319e-01	ci right 8.763787e-01	k: 481529	n:550000
KS ci ratio: 3.023881e-01	ci left: 2.593359e-04	ci right 3.533322e-04	k: 167	n:550000
SOLH   550000 perm   235 sec   (2337 perm/sec)   p_kst 3.036364e-04   p_cons 8.755073e-01   p_joint 4.454545e-04

Joint ci ratio: 2.473725e-01	ci left: 3.928102e-04	ci right 5.053203e-04	k: 250	n:560000
Cons ci ratio: 1.974989e-03	ci left: 8.746754e-01	ci right 8.764064e-01	k: 490304	n:560000
KS ci ratio: 3.014927e-01	ci left: 2.563553e-04	ci right 3.489434e-04	k: 168	n:560000
SOLH   560000 perm   241 sec   (2321 perm/sec)   p_kst 3.000000e-04   p_cons 8.755429e-01   p_joint 4.464286e-04

Joint ci ratio: 2.425861e-01	ci left: 4.023860e-04	ci right 5.150733e-04	k: 260	n:570000
Cons ci ratio: 1.957595e-03	ci left: 8.746824e-01	ci right 8.763980e-01	k: 499059	n:570000
KS ci ratio: 2.962784e-01	ci left: 2.615951e-04	ci right 3.541346e-04	k: 174	n:570000
SOLH   570000 perm   247 sec   (2309 perm/sec)   p_kst 3.052632e-04   p_cons 8.755421e-01   p_joint 4.561404e-04

Joint ci ratio: 2.412042e-01	ci left: 4.003072e-04	ci right 5.116781e-04	k: 263	n:580000
Cons ci ratio: 1.940974e-03	ci left: 8.746528e-01	ci right 8.763538e-01	k: 507793	n:580000
KS ci ratio: 2.946000e-01	ci left: 2.602776e-04	ci right 3.517320e-04	k: 176	n:580000
SOLH   580000 perm   253 sec   (2296 perm/sec)   p_kst 3.034483e-04   p_cons 8.755052e-01   p_joint 4.534483e-04

Joint ci ratio: 2.402962e-01	ci left: 3.967076e-04	ci right 5.065997e-04	k: 265	n:590000
Cons ci ratio: 1.924875e-03	ci left: 8.746124e-01	ci right 8.762992e-01	k: 516520	n:590000
KS ci ratio: 2.929499e-01	ci left: 2.590061e-04	ci right 3.494094e-04	k: 178	n:590000
SOLH   590000 perm   258 sec   (2283 perm/sec)   p_kst 3.016949e-04   p_cons 8.754576e-01   p_joint 4.491525e-04

Joint ci ratio: 2.389528e-01	ci left: 3.947956e-04	ci right 5.034561e-04	k: 268	n:600000
Cons ci ratio: 1.908119e-03	ci left: 8.746937e-01	ci right 8.763660e-01	k: 525319	n:600000
KS ci ratio: 2.905254e-01	ci left: 2.593235e-04	ci right 3.489508e-04	k: 181	n:600000
SOLH   600000 perm   264 sec   (2269 perm/sec)   p_kst 3.016667e-04   p_cons 8.755317e-01   p_joint 4.466667e-04

Joint ci ratio: 2.371959e-01	ci left: 3.944898e-04	ci right 5.021505e-04	k: 272	n:610000
Cons ci ratio: 1.892019e-03	ci left: 8.747462e-01	ci right 8.764044e-01	k: 534102	n:610000
KS ci ratio: 2.889424e-01	ci left: 2.581127e-04	ci right 3.467466e-04	k: 183	n:610000
SOLH   610000 perm   274 sec   (2225 perm/sec)   p_kst 3.000000e-04   p_cons 8.755770e-01   p_joint 4.459016e-04

Joint ci ratio: 2.350531e-01	ci left: 3.957145e-04	ci right 5.025920e-04	k: 277	n:620000
Cons ci ratio: 1.876363e-03	ci left: 8.747921e-01	ci right 8.764366e-01	k: 542882	n:620000
KS ci ratio: 2.881609e-01	ci left: 2.554457e-04	ci right 3.428833e-04	k: 184	n:620000
SOLH   620000 perm   280 sec   (2213 perm/sec)   p_kst 2.967742e-04   p_cons 8.756161e-01   p_joint 4.467742e-04

Joint ci ratio: 2.333802e-01	ci left: 3.954100e-04	ci right 5.013355e-04	k: 281	n:630000
Cons ci ratio: 1.861183e-03	ci left: 8.748255e-01	ci right 8.764568e-01	k: 551655	n:630000
KS ci ratio: 2.858525e-01	ci left: 2.558102e-04	ci right 3.425444e-04	k: 187	n:630000
SOLH   630000 perm   286 sec   (2201 perm/sec)   p_kst 2.968254e-04   p_cons 8.756429e-01   p_joint 4.460317e-04

Joint ci ratio: 2.321489e-01	ci left: 3.936458e-04	ci right 4.984625e-04	k: 284	n:640000
Cons ci ratio: 1.847147e-03	ci left: 8.747654e-01	ci right 8.763843e-01	k: 560369	n:640000
KS ci ratio: 2.843443e-01	ci left: 2.547147e-04	ci right 3.405401e-04	k: 189	n:640000
SOLH   640000 perm   292 sec   (2189 perm/sec)   p_kst 2.953125e-04   p_cons 8.755766e-01   p_joint 4.437500e-04

Joint ci ratio: 2.305368e-01	ci left: 3.933869e-04	ci right 4.973037e-04	k: 288	n:650000
Cons ci ratio: 1.833139e-03	ci left: 8.747412e-01	ci right 8.763477e-01	k: 569105	n:650000
KS ci ratio: 2.813974e-01	ci left: 2.565134e-04	ci right 3.418902e-04	k: 193	n:650000
SOLH   650000 perm   299 sec   (2175 perm/sec)   p_kst 2.969231e-04   p_cons 8.755462e-01   p_joint 4.430769e-04

Joint ci ratio: 2.281800e-01	ci left: 3.959952e-04	ci right 4.993811e-04	k: 294	n:660000
Cons ci ratio: 1.818951e-03	ci left: 8.747771e-01	ci right 8.763712e-01	k: 577880	n:660000
KS ci ratio: 2.778393e-01	ci left: 2.596715e-04	ci right 3.448155e-04	k: 198	n:660000
SOLH   660000 perm   306 sec   (2160 perm/sec)   p_kst 3.000000e-04   p_cons 8.755758e-01   p_joint 4.454545e-04

Joint ci ratio: 2.270288e-01	ci left: 3.943071e-04	ci right 4.966602e-04	k: 297	n:670000
Cons ci ratio: 1.805347e-03	ci left: 8.747804e-01	ci right 8.763626e-01	k: 586634	n:670000
KS ci ratio: 2.764538e-01	ci left: 2.585735e-04	ci right 3.428610e-04	k: 200	n:670000
SOLH   670000 perm   314 sec   (2137 perm/sec)   p_kst 2.985075e-04   p_cons 8.755731e-01   p_joint 4.432836e-04

Joint ci ratio: 2.251478e-01	ci left: 3.954450e-04	ci right 4.971250e-04	k: 302	n:680000
Cons ci ratio: 1.792347e-03	ci left: 8.747469e-01	ci right 8.763176e-01	k: 595363	n:680000
KS ci ratio: 2.744135e-01	ci left: 2.588780e-04	ci right 3.425346e-04	k: 203	n:680000
SOLH   680000 perm   321 sec   (2122 perm/sec)   p_kst 2.985294e-04   p_cons 8.755338e-01   p_joint 4.441176e-04

Joint ci ratio: 2.236763e-01	ci left: 3.951852e-04	ci right 4.960427e-04	k: 306	n:690000
Cons ci ratio: 1.780108e-03	ci left: 8.746548e-01	ci right 8.762145e-01	k: 604051	n:690000
KS ci ratio: 2.730784e-01	ci left: 2.578258e-04	ci right 3.406674e-04	k: 205	n:690000
SOLH   690000 perm   327 sec   (2110 perm/sec)   p_kst 2.971014e-04   p_cons 8.754362e-01   p_joint 4.434783e-04

Joint ci ratio: 2.225916e-01	ci left: 3.935858e-04	ci right 4.934813e-04	k: 309	n:700000
Cons ci ratio: 1.768115e-03	ci left: 8.745653e-01	ci right 8.761144e-01	k: 612739	n:700000
KS ci ratio: 2.717625e-01	ci left: 2.568045e-04	ci right 3.388526e-04	k: 207	n:700000
SOLH   700000 perm   334 sec   (2097 perm/sec)   p_kst 2.957143e-04   p_cons 8.753414e-01   p_joint 4.414286e-04

Joint ci ratio: 2.208178e-01	ci left: 3.946936e-04	ci right 4.939635e-04	k: 314	n:710000
Cons ci ratio: 1.755092e-03	ci left: 8.746366e-01	ci right 8.761744e-01	k: 621539	n:710000
KS ci ratio: 2.691863e-01	ci left: 2.584394e-04	ci right 3.400949e-04	k: 211	n:710000
SOLH   710000 perm   341 sec   (2082 perm/sec)   p_kst 2.971831e-04   p_cons 8.754070e-01   p_joint 4.422535e-04

Joint ci ratio: 2.197740e-01	ci left: 3.931485e-04	ci right 4.914992e-04	k: 317	n:720000
Cons ci ratio: 1.743261e-03	ci left: 8.745918e-01	ci right 8.761191e-01	k: 630257	n:720000
KS ci ratio: 2.679257e-01	ci left: 2.574407e-04	ci right 3.383357e-04	k: 213	n:720000
SOLH   720000 perm   348 sec   (2071 perm/sec)   p_kst 2.958333e-04   p_cons 8.753569e-01   p_joint 4.402778e-04

Joint ci ratio: 2.190865e-01	ci left: 3.903520e-04	ci right 4.876565e-04	k: 319	n:730000
Cons ci ratio: 1.732047e-03	ci left: 8.745001e-01	ci right 8.760174e-01	k: 638940	n:730000
KS ci ratio: 2.679262e-01	ci left: 2.539140e-04	ci right 3.337011e-04	k: 213	n:730000
SOLH   730000 perm   354 sec   (2059 perm/sec)   p_kst 2.917808e-04   p_cons 8.752603e-01   p_joint 4.369863e-04

Joint ci ratio: 2.170607e-01	ci left: 3.927423e-04	ci right 4.896167e-04	k: 325	n:740000
Cons ci ratio: 1.719969e-03	ci left: 8.745478e-01	ci right 8.760546e-01	k: 647724	n:740000
KS ci ratio: 2.648497e-01	ci left: 2.567884e-04	ci right 3.363984e-04	k: 218	n:740000
SOLH   740000 perm   362 sec   (2045 perm/sec)   p_kst 2.945946e-04   p_cons 8.753027e-01   p_joint 4.391892e-04

Joint ci ratio: 2.167291e-01	ci left: 3.887665e-04	ci right 4.844943e-04	k: 326	n:750000
Cons ci ratio: 1.708851e-03	ci left: 8.745034e-01	ci right 8.760004e-01	k: 656440	n:750000
KS ci ratio: 2.642474e-01	ci left: 2.546094e-04	ci right 3.333347e-04	k: 219	n:750000
SOLH   750000 perm   369 sec   (2034 perm/sec)   p_kst 2.920000e-04   p_cons 8.752533e-01   p_joint 4.346667e-04

Joint ci ratio: 2.163989e-01	ci left: 3.848955e-04	ci right 4.795065e-04	k: 327	n:760000
Cons ci ratio: 1.697761e-03	ci left: 8.744839e-01	ci right 8.759711e-01	k: 665174	n:760000
KS ci ratio: 2.642479e-01	ci left: 2.512593e-04	ci right 3.289488e-04	k: 219	n:760000
SOLH   760000 perm   376 sec   (2023 perm/sec)   p_kst 2.881579e-04   p_cons 8.752289e-01   p_joint 4.302632e-04

Joint ci ratio: 2.154162e-01	ci left: 3.835823e-04	ci right 4.773856e-04	k: 330	n:770000
Cons ci ratio: 1.686803e-03	ci left: 8.744754e-01	ci right 8.759530e-01	k: 673916	n:770000
KS ci ratio: 2.624644e-01	ci left: 2.516351e-04	ci right 3.288295e-04	k: 222	n:770000
SOLH   770000 perm   383 sec   (2011 perm/sec)   p_kst 2.883117e-04   p_cons 8.752156e-01   p_joint 4.285714e-04

Joint ci ratio: 2.134897e-01	ci left: 3.859438e-04	ci right 4.793701e-04	k: 336	n:780000
Cons ci ratio: 1.676065e-03	ci left: 8.744658e-01	ci right 8.759340e-01	k: 682657	n:780000
KS ci ratio: 2.612955e-01	ci left: 2.508048e-04	ci right 3.273458e-04	k: 224	n:780000
SOLH   780000 perm   391 sec   (1997 perm/sec)   p_kst 2.871795e-04   p_cons 8.752013e-01   p_joint 4.307692e-04

Joint ci ratio: 2.122339e-01	ci left: 3.858518e-04	ci right 4.786349e-04	k: 340	n:790000
Cons ci ratio: 1.665819e-03	ci left: 8.744185e-01	ci right 8.758775e-01	k: 691368	n:790000
KS ci ratio: 2.612960e-01	ci left: 2.476300e-04	ci right 3.232023e-04	k: 224	n:790000
SOLH   790000 perm   398 sec   (1986 perm/sec)   p_kst 2.835443e-04   p_cons 8.751494e-01   p_joint 4.303797e-04

Joint ci ratio: 2.113067e-01	ci left: 3.845797e-04	ci right 4.766006e-04	k: 343	n:800000
Cons ci ratio: 1.655313e-03	ci left: 8.744312e-01	ci right 8.758811e-01	k: 700126	n:800000
KS ci ratio: 2.601425e-01	ci left: 2.468712e-04	ci right 3.218253e-04	k: 226	n:800000
SOLH   800000 perm   405 sec   (1973 perm/sec)   p_kst 2.825000e-04   p_cons 8.751575e-01   p_joint 4.287500e-04

Joint ci ratio: 2.103914e-01	ci left: 3.833400e-04	ci right 4.746157e-04	k: 346	n:810000
Cons ci ratio: 1.644614e-03	ci left: 8.744956e-01	ci right 8.759362e-01	k: 708926	n:810000
KS ci ratio: 2.590041e-01	ci left: 2.461319e-04	ci right 3.204816e-04	k: 228	n:810000
SOLH   810000 perm   413 sec   (1962 perm/sec)   p_kst 2.814815e-04   p_cons 8.752173e-01   p_joint 4.271605e-04

Joint ci ratio: 2.083005e-01	ci left: 3.867542e-04	ci right 4.778110e-04	k: 353	n:820000
Cons ci ratio: 1.634392e-03	ci left: 8.745219e-01	ci right 8.759535e-01	k: 717696	n:820000
KS ci ratio: 2.556758e-01	ci left: 2.499755e-04	ci right 3.243612e-04	k: 234	n:820000
SOLH   820000 perm   420 sec   (1951 perm/sec)   p_kst 2.853659e-04   p_cons 8.752390e-01   p_joint 4.304878e-04

Joint ci ratio: 2.077149e-01	ci left: 3.843786e-04	ci right 4.745893e-04	k: 355	n:830000
Cons ci ratio: 1.624789e-03	ci left: 8.744895e-01	ci right 8.759127e-01	k: 726418	n:830000
KS ci ratio: 2.551338e-01	ci left: 2.480914e-04	ci right 3.217350e-04	k: 235	n:830000
SOLH   830000 perm   428 sec   (1940 perm/sec)   p_kst 2.831325e-04   p_cons 8.752024e-01   p_joint 4.277108e-04

Joint ci ratio: 2.051375e-01	ci left: 3.899633e-04	ci right 4.802066e-04	k: 364	n:840000
Cons ci ratio: 1.615036e-03	ci left: 8.745009e-01	ci right 8.759156e-01	k: 735176	n:840000
KS ci ratio: 2.524730e-01	ci left: 2.507118e-04	ci right 3.242350e-04	k: 240	n:840000
SOLH   840000 perm   435 sec   (1929 perm/sec)   p_kst 2.857143e-04   p_cons 8.752095e-01   p_joint 4.333333e-04

Joint ci ratio: 2.045780e-01	ci left: 3.876077e-04	ci right 4.770307e-04	k: 366	n:850000
Cons ci ratio: 1.605301e-03	ci left: 8.745333e-01	ci right 8.759395e-01	k: 743952	n:850000
KS ci ratio: 2.519511e-01	ci left: 2.488643e-04	ci right 3.216712e-04	k: 241	n:850000
SOLH   850000 perm   443 sec   (1918 perm/sec)   p_kst 2.835294e-04   p_cons 8.752376e-01   p_joint 4.305882e-04

Joint ci ratio: 2.023837e-01	ci left: 3.919291e-04	ci right 4.812593e-04	k: 374	n:860000
Cons ci ratio: 1.595671e-03	ci left: 8.745743e-01	ci right 8.759720e-01	k: 752736	n:860000
KS ci ratio: 2.488842e-01	ci left: 2.525095e-04	ci right 3.253444e-04	k: 247	n:860000
SOLH   860000 perm   451 sec   (1907 perm/sec)   p_kst 2.872093e-04   p_cons 8.752744e-01   p_joint 4.348837e-04

Joint ci ratio: 2.015791e-01	ci left: 3.906980e-04	ci right 4.793501e-04	k: 377	n:870000
Cons ci ratio: 1.586714e-03	ci left: 8.745452e-01	ci right 8.759351e-01	k: 761460	n:870000
KS ci ratio: 2.483842e-01	ci left: 2.506849e-04	ci right 3.228257e-04	k: 248	n:870000
SOLH   870000 perm   459 sec   (1896 perm/sec)   p_kst 2.850575e-04   p_cons 8.752414e-01   p_joint 4.333333e-04

Joint ci ratio: 1.997379e-01	ci left: 3.938132e-04	ci right 4.822565e-04	k: 384	n:880000
Cons ci ratio: 1.577882e-03	ci left: 8.745202e-01	ci right 8.759023e-01	k: 770187	n:880000
KS ci ratio: 2.464127e-01	ci left: 2.520999e-04	ci right 3.239839e-04	k: 252	n:880000
SOLH   880000 perm   471 sec   (1869 perm/sec)   p_kst 2.863636e-04   p_cons 8.752125e-01   p_joint 4.363636e-04

Joint ci ratio: 1.989644e-01	ci left: 3.925909e-04	ci right 4.803768e-04	k: 387	n:890000
Cons ci ratio: 1.568937e-03	ci left: 8.745319e-01	ci right 8.759061e-01	k: 778946	n:890000
KS ci ratio: 2.449646e-01	ci left: 2.524306e-04	ci right 3.239215e-04	k: 255	n:890000
SOLH   890000 perm   479 sec   (1859 perm/sec)   p_kst 2.865169e-04   p_cons 8.752202e-01   p_joint 4.348315e-04

Joint ci ratio: 1.976946e-01	ci left: 3.935084e-04	ci right 4.808703e-04	k: 392	n:900000
Cons ci ratio: 1.560348e-03	ci left: 8.745143e-01	ci right 8.758810e-01	k: 787679	n:900000
KS ci ratio: 2.426066e-01	ci left: 2.548421e-04	ci right 3.262166e-04	k: 260	n:900000
SOLH   900000 perm   487 sec   (1849 perm/sec)   p_kst 2.888889e-04   p_cons 8.751989e-01   p_joint 4.355556e-04

Joint ci ratio: 1.969444e-01	ci left: 3.923180e-04	ci right 4.790454e-04	k: 395	n:910000
Cons ci ratio: 1.551697e-03	ci left: 8.745258e-01	ci right 8.758850e-01	k: 796438	n:910000
KS ci ratio: 2.416825e-01	ci left: 2.541060e-04	ci right 3.249627e-04	k: 262	n:910000
SOLH   910000 perm   496 sec   (1833 perm/sec)   p_kst 2.879121e-04   p_cons 8.752066e-01   p_joint 4.340659e-04

Joint ci ratio: 1.952262e-01	ci left: 3.952889e-04	ci right 4.818201e-04	k: 402	n:920000
Cons ci ratio: 1.542895e-03	ci left: 8.745785e-01	ci right 8.759300e-01	k: 805235	n:920000
KS ci ratio: 2.403157e-01	ci left: 2.544080e-04	ci right 3.248879e-04	k: 265	n:920000
SOLH   920000 perm   505 sec   (1821 perm/sec)   p_kst 2.880435e-04   p_cons 8.752554e-01   p_joint 4.369565e-04

Joint ci ratio: 1.937888e-01	ci left: 3.971760e-04	ci right 4.834046e-04	k: 408	n:930000
Cons ci ratio: 1.534635e-03	ci left: 8.745740e-01	ci right 8.759183e-01	k: 813980	n:930000
KS ci ratio: 2.380882e-01	ci left: 2.567266e-04	ci right 3.270924e-04	k: 270	n:930000
SOLH   930000 perm   514 sec   (1810 perm/sec)   p_kst 2.903226e-04   p_cons 8.752473e-01   p_joint 4.387097e-04

Joint ci ratio: 1.916907e-01	ci left: 4.020633e-04	ci right 4.882977e-04	k: 417	n:940000
Cons ci ratio: 1.525888e-03	ci left: 8.746582e-01	ci right 8.759948e-01	k: 822808	n:940000
KS ci ratio: 2.346493e-01	ci left: 2.620022e-04	ci right 3.326263e-04	k: 278	n:940000
SOLH   940000 perm   522 sec   (1801 perm/sec)   p_kst 2.957447e-04   p_cons 8.753277e-01   p_joint 4.436170e-04

Joint ci ratio: 1.901053e-01	ci left: 4.048474e-04	ci right 4.908778e-04	k: 424	n:950000
Cons ci ratio: 1.517941e-03	ci left: 8.746466e-01	ci right 8.759763e-01	k: 831547	n:950000
KS ci ratio: 2.329850e-01	ci left: 2.632082e-04	ci right 3.335817e-04	k: 282	n:950000
SOLH   950000 perm   531 sec   (1791 perm/sec)   p_kst 2.968421e-04   p_cons 8.753126e-01   p_joint 4.463158e-04

Joint ci ratio: 1.889967e-01	ci left: 4.055914e-04	ci right 4.912197e-04	k: 429	n:960000
Cons ci ratio: 1.509626e-03	ci left: 8.747064e-01	ci right 8.760289e-01	k: 840354	n:960000
KS ci ratio: 2.317598e-01	ci left: 2.634096e-04	ci right 3.334134e-04	k: 285	n:960000
SOLH   960000 perm   539 sec   (1780 perm/sec)   p_kst 2.968750e-04   p_cons 8.753688e-01   p_joint 4.468750e-04

Joint ci ratio: 1.885590e-01	ci left: 4.033744e-04	ci right 4.883148e-04	k: 431	n:970000
Cons ci ratio: 1.501204e-03	ci left: 8.748000e-01	ci right 8.761153e-01	k: 849195	n:970000
KS ci ratio: 2.313559e-01	ci left: 2.616651e-04	ci right 3.310669e-04	k: 286	n:970000
SOLH   970000 perm   548 sec   (1771 perm/sec)   p_kst 2.948454e-04   p_cons 8.754588e-01   p_joint 4.443299e-04

Joint ci ratio: 1.874771e-01	ci left: 4.041203e-04	ci right 4.886739e-04	k: 436	n:980000
Cons ci ratio: 1.493753e-03	ci left: 8.747701e-01	ci right 8.760787e-01	k: 857917	n:980000
KS ci ratio: 2.305541e-01	ci left: 2.609178e-04	ci right 3.298473e-04	k: 288	n:980000
SOLH   980000 perm   557 sec   (1760 perm/sec)   p_kst 2.938776e-04   p_cons 8.754255e-01   p_joint 4.448980e-04

Joint ci ratio: 1.868370e-01	ci left: 4.029265e-04	ci right 4.869100e-04	k: 439	n:990000
Cons ci ratio: 1.486219e-03	ci left: 8.747691e-01	ci right 8.760711e-01	k: 866667	n:990000
KS ci ratio: 2.297606e-01	ci left: 2.601860e-04	ci right 3.286520e-04	k: 290	n:990000
SOLH   990000 perm   565 sec   (1751 perm/sec)   p_kst 2.929293e-04   p_cons 8.754212e-01   p_joint 4.434343e-04

Joint ci ratio: 1.853681e-01	ci left: 4.055712e-04	ci right 4.893665e-04	k: 446	n:1000000
Cons ci ratio: 1.478310e-03	ci left: 8.748403e-01	ci right 8.761355e-01	k: 875489	n:1000000
KS ci ratio: 2.278115e-01	ci left: 2.622976e-04	ci right 3.306515e-04	k: 295	n:1000000
SOLH   1000000 perm   574 sec   (1741 perm/sec)   p_kst 2.950000e-04   p_cons 8.754890e-01   p_joint 4.460000e-04

Joint ci ratio: 1.837309e-01	ci left: 4.091106e-04	ci right 4.928075e-04	k: 454	n:1010000
Cons ci ratio: 1.470612e-03	ci left: 8.748972e-01	ci right 8.761858e-01	k: 884298	n:1010000
KS ci ratio: 2.251642e-01	ci left: 2.662382e-04	ci right 3.347009e-04	k: 302	n:1010000
SOLH   1010000 perm   583 sec   (1732 perm/sec)   p_kst 2.990099e-04   p_cons 8.755426e-01   p_joint 4.495050e-04

Joint ci ratio: 1.835297e-01	ci left: 4.060350e-04	ci right 4.890016e-04	k: 455	n:1020000
Cons ci ratio: 1.463276e-03	ci left: 8.749167e-01	ci right 8.761988e-01	k: 893070	n:1020000
KS ci ratio: 2.247938e-01	ci left: 2.645531e-04	ci right 3.324551e-04	k: 303	n:1020000
SOLH   1020000 perm   592 sec   (1723 perm/sec)   p_kst 2.970588e-04   p_cons 8.755588e-01   p_joint 4.460784e-04

Joint ci ratio: 1.827300e-01	ci left: 4.057984e-04	ci right 4.883153e-04	k: 459	n:1030000
Cons ci ratio: 1.456153e-03	ci left: 8.749202e-01	ci right 8.761961e-01	k: 901826	n:1030000
KS ci ratio: 2.236928e-01	ci left: 2.647337e-04	ci right 3.323033e-04	k: 306	n:1030000
SOLH   1030000 perm   601 sec   (1714 perm/sec)   p_kst 2.970874e-04   p_cons 8.755592e-01   p_joint 4.456311e-04

Joint ci ratio: 1.817449e-01	ci left: 4.064849e-04	ci right 4.886468e-04	k: 464	n:1040000
Cons ci ratio: 1.449004e-03	ci left: 8.749430e-01	ci right 8.762126e-01	k: 910602	n:1040000
KS ci ratio: 2.222495e-01	ci left: 2.658195e-04	ci right 3.331687e-04	k: 310	n:1040000
SOLH   1040000 perm   610 sec   (1705 perm/sec)   p_kst 2.980769e-04   p_cons 8.755788e-01   p_joint 4.461538e-04

Joint ci ratio: 1.807756e-01	ci left: 4.071594e-04	ci right 4.889707e-04	k: 469	n:1050000
Cons ci ratio: 1.441916e-03	ci left: 8.749720e-01	ci right 8.762355e-01	k: 919385	n:1050000
KS ci ratio: 2.211852e-01	ci left: 2.659864e-04	ci right 3.330112e-04	k: 313	n:1050000
SOLH   1050000 perm   619 sec   (1696 perm/sec)   p_kst 2.980952e-04   p_cons 8.756048e-01   p_joint 4.466667e-04

Joint ci ratio: 1.802015e-01	ci left: 4.060206e-04	ci right 4.873157e-04	k: 472	n:1060000
Cons ci ratio: 1.435043e-03	ci left: 8.749835e-01	ci right 8.762409e-01	k: 928150	n:1060000
KS ci ratio: 2.201361e-01	ci left: 2.661508e-04	ci right 3.328560e-04	k: 316	n:1060000
SOLH   1060000 perm   628 sec   (1687 perm/sec)   p_kst 2.981132e-04   p_cons 8.756132e-01   p_joint 4.452830e-04

Joint ci ratio: 1.792565e-01	ci left: 4.066887e-04	ci right 4.876442e-04	k: 477	n:1070000
Cons ci ratio: 1.428065e-03	ci left: 8.750256e-01	ci right 8.762770e-01	k: 936948	n:1070000
KS ci ratio: 2.187601e-01	ci left: 2.671963e-04	ci right 3.336886e-04	k: 320	n:1070000
SOLH   1070000 perm   637 sec   (1679 perm/sec)   p_kst 2.990654e-04   p_cons 8.756523e-01   p_joint 4.457944e-04

Joint ci ratio: 1.781418e-01	ci left: 4.082302e-04	ci right 4.889328e-04	k: 483	n:1080000
Cons ci ratio: 1.421665e-03	ci left: 8.749937e-01	ci right 8.762395e-01	k: 945667	n:1080000
KS ci ratio: 2.177450e-01	ci left: 2.673482e-04	ci right 3.335283e-04	k: 323	n:1080000
SOLH   1080000 perm   647 sec   (1670 perm/sec)   p_kst 2.990741e-04   p_cons 8.756176e-01   p_joint 4.472222e-04

Joint ci ratio: 1.772287e-01	ci left: 4.088681e-04	ci right 4.892381e-04	k: 488	n:1090000
Cons ci ratio: 1.414903e-03	ci left: 8.750314e-01	ci right 8.762712e-01	k: 954461	n:1090000
KS ci ratio: 2.174100e-01	ci left: 2.657629e-04	ci right 3.314358e-04	k: 324	n:1090000
SOLH   1090000 perm   656 sec   (1662 perm/sec)   p_kst 2.972477e-04   p_cons 8.756523e-01   p_joint 4.477064e-04

Joint ci ratio: 1.766876e-01	ci left: 4.077576e-04	ci right 4.876385e-04	k: 491	n:1100000
Cons ci ratio: 1.408248e-03	ci left: 8.750665e-01	ci right 8.763006e-01	k: 963253	n:1100000
KS ci ratio: 2.170764e-01	ci left: 2.642065e-04	ci right 3.293812e-04	k: 325	n:1100000
SOLH   1100000 perm   665 sec   (1653 perm/sec)   p_kst 2.954545e-04   p_cons 8.756845e-01   p_joint 4.463636e-04

Joint ci ratio: 1.757966e-01	ci left: 4.083899e-04	ci right 4.879483e-04	k: 496	n:1110000
Cons ci ratio: 1.401837e-03	ci left: 8.750776e-01	ci right 8.763060e-01	k: 972019	n:1110000
KS ci ratio: 2.160845e-01	ci left: 2.643824e-04	ci right 3.292629e-04	k: 328	n:1110000
SOLH   1110000 perm   675 sec   (1645 perm/sec)   p_kst 2.954955e-04   p_cons 8.756928e-01   p_joint 4.468468e-04

Joint ci ratio: 1.752685e-01	ci left: 4.073044e-04	ci right 4.863878e-04	k: 499	n:1120000
Cons ci ratio: 1.395616e-03	ci left: 8.750724e-01	ci right 8.762953e-01	k: 980767	n:1120000
KS ci ratio: 2.157570e-01	ci left: 2.628663e-04	ci right 3.272642e-04	k: 329	n:1120000
SOLH   1120000 perm   684 sec   (1636 perm/sec)   p_kst 2.937500e-04   p_cons 8.756848e-01   p_joint 4.455357e-04

Joint ci ratio: 1.749192e-01	ci left: 4.053923e-04	ci right 4.839309e-04	k: 501	n:1130000
Cons ci ratio: 1.389195e-03	ci left: 8.751116e-01	ci right 8.763290e-01	k: 989565	n:1130000
KS ci ratio: 2.157573e-01	ci left: 2.605401e-04	ci right 3.243681e-04	k: 329	n:1130000
SOLH   1130000 perm   699 sec   (1616 perm/sec)   p_kst 2.911504e-04   p_cons 8.757212e-01   p_joint 4.433628e-04

Joint ci ratio: 1.738830e-01	ci left: 4.068696e-04	ci right 4.851786e-04	k: 507	n:1140000
Cons ci ratio: 1.383167e-03	ci left: 8.751018e-01	ci right 8.763139e-01	k: 998308	n:1140000
KS ci ratio: 2.141409e-01	ci left: 2.624045e-04	ci right 3.261444e-04	k: 334	n:1140000
SOLH   1140000 perm   709 sec   (1608 perm/sec)   p_kst 2.929825e-04   p_cons 8.757088e-01   p_joint 4.447368e-04

Joint ci ratio: 1.733720e-01	ci left: 4.058270e-04	ci right 4.836816e-04	k: 510	n:1150000
Cons ci ratio: 1.376943e-03	ci left: 8.751357e-01	ci right 8.763424e-01	k: 1007101	n:1150000
KS ci ratio: 2.135046e-01	ci left: 2.617687e-04	ci right 3.251405e-04	k: 336	n:1150000
SOLH   1150000 perm   719 sec   (1600 perm/sec)   p_kst 2.921739e-04   p_cons 8.757400e-01   p_joint 4.434783e-04

Joint ci ratio: 1.730339e-01	ci left: 4.039778e-04	ci right 4.813108e-04	k: 512	n:1160000
Cons ci ratio: 1.371057e-03	ci left: 8.751285e-01	ci right 8.763300e-01	k: 1015847	n:1160000
KS ci ratio: 2.135049e-01	ci left: 2.595121e-04	ci right 3.223376e-04	k: 336	n:1160000
SOLH   1160000 perm   728 sec   (1592 perm/sec)   p_kst 2.896552e-04   p_cons 8.757302e-01   p_joint 4.413793e-04

Joint ci ratio: 1.720307e-01	ci left: 4.054318e-04	ci right 4.825464e-04	k: 518	n:1170000
Cons ci ratio: 1.365385e-03	ci left: 8.750991e-01	ci right 8.762956e-01	k: 1024567	n:1170000
KS ci ratio: 2.122489e-01	ci left: 2.605306e-04	ci right 3.231834e-04	k: 340	n:1170000
SOLH   1170000 perm   739 sec   (1584 perm/sec)   p_kst 2.905983e-04   p_cons 8.756983e-01   p_joint 4.427350e-04

Joint ci ratio: 1.707197e-01	ci left: 4.084849e-04	ci right 4.855271e-04	k: 526	n:1180000
Cons ci ratio: 1.359979e-03	ci left: 8.750388e-01	ci right 8.762305e-01	k: 1033250	n:1180000
KS ci ratio: 2.113213e-01	ci left: 2.607302e-04	ci right 3.231215e-04	k: 343	n:1180000
SOLH   1180000 perm   749 sec   (1576 perm/sec)   p_kst 2.906780e-04   p_cons 8.756356e-01   p_joint 4.457627e-04

Joint ci ratio: 1.697559e-01	ci left: 4.098794e-04	ci right 4.867037e-04	k: 532	n:1190000
Cons ci ratio: 1.354124e-03	ci left: 8.750621e-01	ci right 8.762487e-01	k: 1042031	n:1190000
KS ci ratio: 2.101032e-01	ci left: 2.617232e-04	ci right 3.239447e-04	k: 347	n:1190000
SOLH   1190000 perm   759 sec   (1568 perm/sec)   p_kst 2.915966e-04   p_cons 8.756563e-01   p_joint 4.470588e-04

Joint ci ratio: 1.694385e-01	ci left: 4.080597e-04	ci right 4.843852e-04	k: 534	n:1200000
Cons ci ratio: 1.348514e-03	ci left: 8.750574e-01	ci right 8.762391e-01	k: 1050779	n:1200000
KS ci ratio: 2.095022e-01	ci left: 2.611213e-04	ci right 3.229993e-04	k: 349	n:1200000
SOLH   1200000 perm   769 sec   (1560 perm/sec)   p_kst 2.908333e-04   p_cons 8.756492e-01   p_joint 4.450000e-04

Joint ci ratio: 1.686522e-01	ci left: 4.086447e-04	ci right 4.846889e-04	k: 539	n:1210000
Cons ci ratio: 1.342774e-03	ci left: 8.750852e-01	ci right 8.762618e-01	k: 1059566	n:1210000
KS ci ratio: 2.089062e-01	ci left: 2.605295e-04	ci right 3.220692e-04	k: 351	n:1210000
SOLH   1210000 perm   779 sec   (1553 perm/sec)   p_kst 2.900826e-04   p_cons 8.756744e-01   p_joint 4.454545e-04

Joint ci ratio: 1.678768e-01	ci left: 4.092209e-04	ci right 4.849868e-04	k: 544	n:1220000
Cons ci ratio: 1.337208e-03	ci left: 8.750960e-01	ci right 8.762678e-01	k: 1068333	n:1220000
KS ci ratio: 2.080216e-01	ci left: 2.607247e-04	ci right 3.220165e-04	k: 354	n:1220000
SOLH   1220000 perm   790 sec   (1545 perm/sec)   p_kst 2.901639e-04   p_cons 8.756828e-01   p_joint 4.459016e-04

Joint ci ratio: 1.668088e-01	ci left: 4.113467e-04	ci right 4.869730e-04	k: 551	n:1230000
Cons ci ratio: 1.331601e-03	ci left: 8.751246e-01	ci right 8.762915e-01	k: 1077122	n:1230000
KS ci ratio: 2.062854e-01	ci left: 2.632300e-04	ci right 3.245292e-04	k: 360	n:1230000
SOLH   1230000 perm   801 sec   (1536 perm/sec)   p_kst 2.926829e-04   p_cons 8.757089e-01   p_joint 4.479675e-04

Joint ci ratio: 1.657609e-01	ci left: 4.134396e-04	ci right 4.889256e-04	k: 558	n:1240000
Cons ci ratio: 1.326359e-03	ci left: 8.751043e-01	ci right 8.762665e-01	k: 1085851	n:1240000
KS ci ratio: 2.045920e-01	ci left: 2.656971e-04	ci right 3.269992e-04	k: 366	n:1240000
SOLH   1240000 perm   817 sec   (1518 perm/sec)   p_kst 2.951613e-04   p_cons 8.756863e-01   p_joint 4.500000e-04

Joint ci ratio: 1.648783e-01	ci left: 4.147336e-04	ci right 4.900126e-04	k: 564	n:1250000
Cons ci ratio: 1.321207e-03	ci left: 8.750795e-01	ci right 8.762372e-01	k: 1094574	n:1250000
KS ci ratio: 2.037609e-01	ci left: 2.658488e-04	ci right 3.269058e-04	k: 369	n:1250000
SOLH   1250000 perm   828 sec   (1510 perm/sec)   p_kst 2.952000e-04   p_cons 8.756592e-01   p_joint 4.512000e-04

Joint ci ratio: 1.638662e-01	ci left: 4.167691e-04	ci right 4.919074e-04	k: 571	n:1260000
Cons ci ratio: 1.315732e-03	ci left: 8.751187e-01	ci right 8.762716e-01	k: 1103377	n:1260000
KS ci ratio: 2.021283e-01	ci left: 2.682588e-04	ci right 3.293148e-04	k: 375	n:1260000
SOLH   1260000 perm   839 sec   (1501 perm/sec)   p_kst 2.976190e-04   p_cons 8.756960e-01   p_joint 4.531746e-04

Joint ci ratio: 1.634382e-01	ci left: 4.157529e-04	ci right 4.904930e-04	k: 574	n:1270000
Cons ci ratio: 1.310546e-03	ci left: 8.751202e-01	ci right 8.762686e-01	k: 1112133	n:1270000
KS ci ratio: 2.013267e-01	ci left: 2.683895e-04	ci right 3.292031e-04	k: 378	n:1270000
SOLH   1270000 perm   850 sec   (1493 perm/sec)   p_kst 2.976378e-04   p_cons 8.756953e-01   p_joint 4.519685e-04

Joint ci ratio: 1.628727e-01	ci left: 4.155022e-04	ci right 4.899135e-04	k: 578	n:1280000
Cons ci ratio: 1.305116e-03	ci left: 8.751726e-01	ci right 8.763163e-01	k: 1120954	n:1280000
KS ci ratio: 2.005346e-01	ci left: 2.685185e-04	ci right 3.290927e-04	k: 381	n:1280000
SOLH   1280000 perm   869 sec   (1473 perm/sec)   p_kst 2.976563e-04   p_cons 8.757453e-01   p_joint 4.515625e-04

Joint ci ratio: 1.623131e-01	ci left: 4.152559e-04	ci right 4.893426e-04	k: 582	n:1290000
Cons ci ratio: 1.299920e-03	ci left: 8.751962e-01	ci right 8.763354e-01	k: 1129739	n:1290000
KS ci ratio: 2.000118e-01	ci left: 2.679096e-04	ci right 3.281697e-04	k: 383	n:1290000
SOLH   1290000 perm   879 sec   (1467 perm/sec)   p_kst 2.968992e-04   p_cons 8.757667e-01   p_joint 4.511628e-04

Joint ci ratio: 1.618971e-01	ci left: 4.142757e-04	ci right 4.879797e-04	k: 585	n:1300000
Cons ci ratio: 1.294763e-03	ci left: 8.752234e-01	ci right 8.763580e-01	k: 1138529	n:1300000
KS ci ratio: 1.994930e-01	ci left: 2.673103e-04	ci right 3.272606e-04	k: 385	n:1300000
SOLH   1300000 perm   890 sec   (1460 perm/sec)   p_kst 2.961538e-04   p_cons 8.757915e-01   p_joint 4.500000e-04

Joint ci ratio: 1.613474e-01	ci left: 4.140432e-04	ci right 4.874315e-04	k: 589	n:1310000
Cons ci ratio: 1.289843e-03	ci left: 8.752202e-01	ci right 8.763506e-01	k: 1147280	n:1310000
KS ci ratio: 1.989783e-01	ci left: 2.667203e-04	ci right 3.263652e-04	k: 387	n:1310000
SOLH   1310000 perm   905 sec   (1447 perm/sec)   p_kst 2.954198e-04   p_cons 8.757863e-01   p_joint 4.496183e-04

Joint ci ratio: 1.609389e-01	ci left: 4.130876e-04	ci right 4.861031e-04	k: 592	n:1320000
Cons ci ratio: 1.284916e-03	ci left: 8.752278e-01	ci right 8.763539e-01	k: 1156045	n:1320000
KS ci ratio: 1.984675e-01	ci left: 2.661394e-04	ci right 3.254832e-04	k: 389	n:1320000
SOLH   1320000 perm   917 sec   (1439 perm/sec)   p_kst 2.946970e-04   p_cons 8.757917e-01   p_joint 4.484848e-04

Joint ci ratio: 1.599972e-01	ci left: 4.150335e-04	ci right 4.879225e-04	k: 599	n:1330000
Cons ci ratio: 1.280142e-03	ci left: 8.752187e-01	ci right 8.763406e-01	k: 1164788	n:1330000
KS ci ratio: 1.972072e-01	ci left: 2.677116e-04	ci right 3.269813e-04	k: 394	n:1330000
SOLH   1330000 perm   928 sec   (1433 perm/sec)   p_kst 2.962406e-04   p_cons 8.757805e-01   p_joint 4.503759e-04

Joint ci ratio: 1.594665e-01	ci left: 4.148020e-04	ci right 4.873856e-04	k: 603	n:1340000
Cons ci ratio: 1.275102e-03	ci left: 8.752643e-01	ci right 8.763818e-01	k: 1173604	n:1340000
KS ci ratio: 1.967099e-01	ci left: 2.671327e-04	ci right 3.261072e-04	k: 396	n:1340000
SOLH   1340000 perm   940 sec   (1426 perm/sec)   p_kst 2.955224e-04   p_cons 8.758239e-01   p_joint 4.500000e-04

Joint ci ratio: 1.585503e-01	ci left: 4.167083e-04	ci right 4.891666e-04	k: 610	n:1350000
Cons ci ratio: 1.270536e-03	ci left: 8.752380e-01	ci right 8.763515e-01	k: 1182324	n:1350000
KS ci ratio: 1.952399e-01	ci left: 2.693803e-04	ci right 3.283538e-04	k: 402	n:1350000
SOLH   1350000 perm   951 sec   (1420 perm/sec)   p_kst 2.977778e-04   p_cons 8.757956e-01   p_joint 4.518519e-04

Joint ci ratio: 1.577774e-01	ci left: 4.178814e-04	ci right 4.901560e-04	k: 616	n:1360000
Cons ci ratio: 1.265886e-03	ci left: 8.752350e-01	ci right 8.763443e-01	k: 1191075	n:1360000
KS ci ratio: 1.947573e-01	ci left: 2.687984e-04	ci right 3.274818e-04	k: 404	n:1360000
SOLH   1360000 perm   962 sec   (1413 perm/sec)   p_kst 2.970588e-04   p_cons 8.757904e-01   p_joint 4.529412e-04

Joint ci ratio: 1.573953e-01	ci left: 4.169346e-04	ci right 4.888543e-04	k: 619	n:1370000
Cons ci ratio: 1.261261e-03	ci left: 8.752363e-01	ci right 8.763416e-01	k: 1199832	n:1370000
KS ci ratio: 1.942783e-01	ci left: 2.682251e-04	ci right 3.266222e-04	k: 406	n:1370000
SOLH   1370000 perm   974 sec   (1407 perm/sec)   p_kst 2.963504e-04   p_cons 8.757898e-01   p_joint 4.518248e-04

Joint ci ratio: 1.570160e-01	ci left: 4.160017e-04	ci right 4.875713e-04	k: 622	n:1380000
Cons ci ratio: 1.256880e-03	ci left: 8.752043e-01	ci right 8.763057e-01	k: 1208543	n:1380000
KS ci ratio: 1.935662e-01	ci left: 2.683498e-04	ci right 3.265347e-04	k: 409	n:1380000
SOLH   1380000 perm   985 sec   (1401 perm/sec)   p_kst 2.963768e-04   p_cons 8.757558e-01   p_joint 4.507246e-04

Joint ci ratio: 1.565144e-01	ci left: 4.157737e-04	ci right 4.870541e-04	k: 626	n:1390000
Cons ci ratio: 1.252502e-03	ci left: 8.751799e-01	ci right 8.762775e-01	k: 1217264	n:1390000
KS ci ratio: 1.928619e-01	ci left: 2.684731e-04	ci right 3.264481e-04	k: 412	n:1390000
SOLH   1390000 perm   996 sec   (1395 perm/sec)   p_kst 2.964029e-04   p_cons 8.757295e-01   p_joint 4.503597e-04

Joint ci ratio: 1.560175e-01	ci left: 4.155493e-04	ci right 4.865439e-04	k: 630	n:1400000
Cons ci ratio: 1.247850e-03	ci left: 8.752118e-01	ci right 8.763053e-01	k: 1226063	n:1400000
KS ci ratio: 1.921652e-01	ci left: 2.685950e-04	ci right 3.263624e-04	k: 415	n:1400000
SOLH   1400000 perm   1008 sec   (1388 perm/sec)   p_kst 2.964286e-04   p_cons 8.757593e-01   p_joint 4.500000e-04

Joint ci ratio: 1.554030e-01	ci left: 4.160101e-04	ci right 4.867774e-04	k: 635	n:1410000
Cons ci ratio: 1.243504e-03	ci left: 8.751984e-01	ci right 8.762880e-01	k: 1234799	n:1410000
KS ci ratio: 1.912479e-01	ci left: 2.693908e-04	ci right 3.270206e-04	k: 419	n:1410000
SOLH   1410000 perm   1028 sec   (1372 perm/sec)   p_kst 2.971631e-04   p_cons 8.757440e-01   p_joint 4.503546e-04

Joint ci ratio: 1.549166e-01	ci left: 4.157880e-04	ci right 4.862756e-04	k: 639	n:1420000
Cons ci ratio: 1.239003e-03	ci left: 8.752204e-01	ci right 8.763062e-01	k: 1243585	n:1420000
KS ci ratio: 1.905685e-01	ci left: 2.695054e-04	ci right 3.269312e-04	k: 422	n:1420000
SOLH   1420000 perm   1039 sec   (1366 perm/sec)   p_kst 2.971831e-04   p_cons 8.757641e-01   p_joint 4.500000e-04

Joint ci ratio: 1.540762e-01	ci left: 4.175862e-04	ci right 4.879592e-04	k: 646	n:1430000
Cons ci ratio: 1.234702e-03	ci left: 8.752156e-01	ci right 8.762976e-01	k: 1252333	n:1430000
KS ci ratio: 1.896737e-01	ci left: 2.702848e-04	ci right 3.275751e-04	k: 426	n:1430000
SOLH   1430000 perm   1051 sec   (1361 perm/sec)   p_kst 2.979021e-04   p_cons 8.757573e-01   p_joint 4.517483e-04

Joint ci ratio: 1.527825e-01	ci left: 4.220320e-04	ci right 4.925024e-04	k: 657	n:1440000
Cons ci ratio: 1.230618e-03	ci left: 8.751802e-01	ci right 8.762586e-01	k: 1261037	n:1440000
KS ci ratio: 1.877055e-01	ci left: 2.743627e-04	ci right 3.318451e-04	k: 435	n:1440000
SOLH   1440000 perm   1063 sec   (1355 perm/sec)   p_kst 3.020833e-04   p_cons 8.757201e-01   p_joint 4.562500e-04

Joint ci ratio: 1.524355e-01	ci left: 4.211114e-04	ci right 4.912538e-04	k: 660	n:1450000
Cons ci ratio: 1.226298e-03	ci left: 8.751944e-01	ci right 8.762690e-01	k: 1269812	n:1450000
KS ci ratio: 1.874907e-01	ci left: 2.731278e-04	ci right 3.302785e-04	k: 436	n:1450000
SOLH   1450000 perm   1074 sec   (1349 perm/sec)   p_kst 3.006897e-04   p_cons 8.757324e-01   p_joint 4.551724e-04

Joint ci ratio: 1.516346e-01	ci left: 4.228392e-04	ci right 4.928658e-04	k: 667	n:1460000
Cons ci ratio: 1.222084e-03	ci left: 8.751974e-01	ci right 8.762683e-01	k: 1278571	n:1460000
KS ci ratio: 1.866384e-01	ci left: 2.738685e-04	ci right 3.308842e-04	k: 440	n:1460000
SOLH   1460000 perm   1086 sec   (1344 perm/sec)   p_kst 3.013699e-04   p_cons 8.757336e-01   p_joint 4.568493e-04

Joint ci ratio: 1.509581e-01	ci left: 4.238899e-04	ci right 4.937490e-04	k: 673	n:1470000
Cons ci ratio: 1.218085e-03	ci left: 8.751697e-01	ci right 8.762370e-01	k: 1287285	n:1470000
KS ci ratio: 1.860068e-01	ci left: 2.739511e-04	ci right 3.307692e-04	k: 443	n:1470000
SOLH   1470000 perm   1099 sec   (1338 perm/sec)   p_kst 3.013605e-04   p_cons 8.757041e-01   p_joint 4.578231e-04

Joint ci ratio: 1.501801e-01	ci left: 4.255774e-04	ci right 4.953206e-04	k: 680	n:1480000
Cons ci ratio: 1.214005e-03	ci left: 8.751640e-01	ci right 8.762278e-01	k: 1296031	n:1480000
KS ci ratio: 1.847624e-01	ci left: 2.759660e-04	ci right 3.327762e-04	k: 449	n:1480000
SOLH   1480000 perm   1111 sec   (1332 perm/sec)   p_kst 3.033784e-04   p_cons 8.756966e-01   p_joint 4.594595e-04

Joint ci ratio: 1.496318e-01	ci left: 4.259510e-04	ci right 4.954778e-04	k: 685	n:1490000
Cons ci ratio: 1.210058e-03	ci left: 8.751416e-01	ci right 8.762019e-01	k: 1304752	n:1490000
KS ci ratio: 1.839466e-01	ci left: 2.766746e-04	ci right 3.333511e-04	k: 453	n:1490000
SOLH   1490000 perm   1123 sec   (1327 perm/sec)   p_kst 3.040268e-04   p_cons 8.756725e-01   p_joint 4.597315e-04

Joint ci ratio: 1.491975e-01	ci left: 4.256783e-04	ci right 4.949409e-04	k: 689	n:1500000
Cons ci ratio: 1.206165e-03	ci left: 8.751169e-01	ci right 8.761737e-01	k: 1313469	n:1500000
KS ci ratio: 1.835429e-01	ci left: 2.761021e-04	ci right 3.325234e-04	k: 455	n:1500000
SOLH   1500000 perm   1135 sec   (1322 perm/sec)   p_kst 3.033333e-04   p_cons 8.756460e-01   p_joint 4.593333e-04

Joint ci ratio: 1.482336e-01	ci left: 4.285977e-04	ci right 4.978450e-04	k: 698	n:1510000
Cons ci ratio: 1.202323e-03	ci left: 8.750898e-01	ci right 8.761432e-01	k: 1322182	n:1510000
KS ci ratio: 1.825447e-01	ci left: 2.774331e-04	ci right 3.337840e-04	k: 460	n:1510000
SOLH   1510000 perm   1147 sec   (1316 perm/sec)   p_kst 3.046358e-04   p_cons 8.756172e-01   p_joint 4.622517e-04

Joint ci ratio: 1.479166e-01	ci left: 4.276786e-04	ci right 4.966164e-04	k: 701	n:1520000
Cons ci ratio: 1.198438e-03	ci left: 8.750776e-01	ci right 8.761276e-01	k: 1330917	n:1520000
KS ci ratio: 1.825449e-01	ci left: 2.756079e-04	ci right 3.315881e-04	k: 460	n:1520000
SOLH   1520000 perm   1160 sec   (1311 perm/sec)   p_kst 3.026316e-04   p_cons 8.756033e-01   p_joint 4.611842e-04

Joint ci ratio: 1.472885e-01	ci left: 4.286600e-04	ci right 4.974369e-04	k: 707	n:1530000
Cons ci ratio: 1.194479e-03	ci left: 8.750858e-01	ci right 8.761324e-01	k: 1339683	n:1530000
KS ci ratio: 1.815628e-01	ci left: 2.769256e-04	ci right 3.328376e-04	k: 465	n:1530000
SOLH   1530000 perm   1172 sec   (1305 perm/sec)   p_kst 3.039216e-04   p_cons 8.756098e-01   p_joint 4.620915e-04

Joint ci ratio: 1.466683e-01	ci left: 4.296294e-04	ci right 4.982460e-04	k: 713	n:1540000
Cons ci ratio: 1.190517e-03	ci left: 8.751018e-01	ci right 8.761449e-01	k: 1348461	n:1540000
KS ci ratio: 1.804049e-01	ci left: 2.788470e-04	ci right 3.347487e-04	k: 471	n:1540000
SOLH   1540000 perm   1184 sec   (1300 perm/sec)   p_kst 3.058442e-04   p_cons 8.756240e-01   p_joint 4.629870e-04

Joint ci ratio: 1.462592e-01	ci left: 4.293436e-04	ci right 4.977067e-04	k: 717	n:1550000
Cons ci ratio: 1.186626e-03	ci left: 8.751117e-01	ci right 8.761514e-01	k: 1357230	n:1550000
KS ci ratio: 1.802142e-01	ci left: 2.776640e-04	ci right 3.332633e-04	k: 472	n:1550000
SOLH   1550000 perm   1197 sec   (1295 perm/sec)   p_kst 3.045161e-04   p_cons 8.756323e-01   p_joint 4.625806e-04

Joint ci ratio: 1.451512e-01	ci left: 4.333857e-04	ci right 5.018243e-04	k: 728	n:1560000
Cons ci ratio: 1.182661e-03	ci left: 8.751421e-01	ci right 8.761783e-01	k: 1366031	n:1560000
KS ci ratio: 1.787090e-01	ci left: 2.807820e-04	ci right 3.364852e-04	k: 480	n:1560000
SOLH   1560000 perm   1210 sec   (1290 perm/sec)   p_kst 3.076923e-04   p_cons 8.756609e-01   p_joint 4.666667e-04

Joint ci ratio: 1.444592e-01	ci left: 4.349224e-04	ci right 5.032480e-04	k: 735	n:1570000
Cons ci ratio: 1.178735e-03	ci left: 8.751721e-01	ci right 8.762049e-01	k: 1374832	n:1570000
KS ci ratio: 1.777872e-01	ci left: 2.820362e-04	ci right 3.376687e-04	k: 485	n:1570000
SOLH   1570000 perm   1222 sec   (1284 perm/sec)   p_kst 3.089172e-04   p_cons 8.756892e-01   p_joint 4.681529e-04

Joint ci ratio: 1.441658e-01	ci left: 4.339999e-04	ci right 5.020301e-04	k: 738	n:1580000
Cons ci ratio: 1.175197e-03	ci left: 8.751370e-01	ci right 8.761667e-01	k: 1383531	n:1580000
KS ci ratio: 1.776047e-01	ci left: 2.808559e-04	ci right 3.361926e-04	k: 486	n:1580000
SOLH   1580000 perm   1236 sec   (1278 perm/sec)   p_kst 3.075949e-04   p_cons 8.756525e-01   p_joint 4.670886e-04

Joint ci ratio: 1.439712e-01	ci left: 4.324828e-04	ci right 5.001759e-04	k: 740	n:1590000
Cons ci ratio: 1.171704e-03	ci left: 8.750999e-01	ci right 8.761264e-01	k: 1392226	n:1590000
KS ci ratio: 1.772412e-01	ci left: 2.802916e-04	ci right 3.353918e-04	k: 488	n:1590000
SOLH   1590000 perm   1250 sec   (1272 perm/sec)   p_kst 3.069182e-04   p_cons 8.756138e-01   p_joint 4.654088e-04

Joint ci ratio: 1.436807e-01	ci left: 4.315873e-04	ci right 4.989923e-04	k: 743	n:1600000
Cons ci ratio: 1.168131e-03	ci left: 8.750839e-01	ci right 8.761073e-01	k: 1400954	n:1600000
KS ci ratio: 1.770604e-01	ci left: 2.791370e-04	ci right 3.339483e-04	k: 489	n:1600000
SOLH   1600000 perm   1263 sec   (1267 perm/sec)   p_kst 3.056250e-04   p_cons 8.755962e-01   p_joint 4.643750e-04

Joint ci ratio: 1.433920e-01	ci left: 4.307031e-04	ci right 4.978232e-04	k: 746	n:1610000
Cons ci ratio: 1.164510e-03	ci left: 8.750830e-01	ci right 8.761032e-01	k: 1409706	n:1610000
KS ci ratio: 1.767002e-01	ci left: 2.785905e-04	ci right 3.331713e-04	k: 491	n:1610000
SOLH   1610000 perm   1276 sec   (1262 perm/sec)   p_kst 3.049689e-04   p_cons 8.755938e-01   p_joint 4.633540e-04

Joint ci ratio: 1.427247e-01	ci left: 4.322108e-04	ci right 4.992257e-04	k: 753	n:1620000
Cons ci ratio: 1.160785e-03	ci left: 8.751081e-01	ci right 8.761251e-01	k: 1418500	n:1620000
KS ci ratio: 1.759862e-01	ci left: 2.792309e-04	ci right 3.336927e-04	k: 495	n:1620000
SOLH   1620000 perm   1289 sec   (1257 perm/sec)   p_kst 3.055556e-04   p_cons 8.756173e-01   p_joint 4.648148e-04

Joint ci ratio: 1.453523e-01	ci left: 4.135914e-04	ci right 4.790024e-04	k: 726	n:1630000
Cons ci ratio: 1.157122e-03	ci left: 8.751280e-01	ci right 8.761418e-01	k: 1427286	n:1630000
KS ci ratio: 1.756325e-01	ci left: 2.786909e-04	ci right 3.329264e-04	k: 497	n:1630000
SOLH   1630000 perm   1302 sec   (1252 perm/sec)   p_kst 3.049080e-04   p_cons 8.756356e-01   p_joint 4.453988e-04

Joint ci ratio: 1.448550e-01	ci left: 4.140076e-04	ci right 4.792411e-04	k: 731	n:1640000
Cons ci ratio: 1.153593e-03	ci left: 8.751287e-01	ci right 8.761395e-01	k: 1436041	n:1640000
KS ci ratio: 1.751059e-01	ci left: 2.787405e-04	ci right 3.328059e-04	k: 500	n:1640000
SOLH   1640000 perm   1318 sec   (1244 perm/sec)   p_kst 3.048780e-04   p_cons 8.756348e-01   p_joint 4.457317e-04

Joint ci ratio: 1.415101e-01	ci left: 4.319510e-04	ci right 4.983076e-04	k: 766	n:1650000
Cons ci ratio: 1.150090e-03	ci left: 8.751307e-01	ci right 8.761383e-01	k: 1444798	n:1650000
KS ci ratio: 1.745840e-01	ci left: 2.787898e-04	ci right 3.326865e-04	k: 503	n:1650000
SOLH   1650000 perm   1332 sec   (1239 perm/sec)   p_kst 3.048485e-04   p_cons 8.756352e-01   p_joint 4.642424e-04

Joint ci ratio: 1.411425e-01	ci left: 4.316734e-04	ci right 4.978006e-04	k: 770	n:1660000
Cons ci ratio: 1.146657e-03	ci left: 8.751253e-01	ci right 8.761300e-01	k: 1453543	n:1660000
KS ci ratio: 1.740667e-01	ci left: 2.788387e-04	ci right 3.325684e-04	k: 506	n:1660000
SOLH   1660000 perm   1345 sec   (1234 perm/sec)   p_kst 3.048193e-04   p_cons 8.756283e-01   p_joint 4.638554e-04

Joint ci ratio: 1.407778e-01	ci left: 4.313992e-04	ci right 4.972994e-04	k: 774	n:1670000
Cons ci ratio: 1.143087e-03	ci left: 8.751519e-01	ci right 8.761534e-01	k: 1462341	n:1670000
KS ci ratio: 1.735540e-01	ci left: 2.788873e-04	ci right 3.324515e-04	k: 509	n:1670000
SOLH   1670000 perm   1358 sec   (1230 perm/sec)   p_kst 3.047904e-04   p_cons 8.756533e-01   p_joint 4.634731e-04

Joint ci ratio: 1.403259e-01	ci left: 4.317029e-04	ci right 4.974200e-04	k: 779	n:1680000
Cons ci ratio: 1.139772e-03	ci left: 8.751358e-01	ci right 8.761344e-01	k: 1471068	n:1680000
KS ci ratio: 1.730458e-01	ci left: 2.789355e-04	ci right 3.323357e-04	k: 512	n:1680000
SOLH   1680000 perm   1376 sec   (1221 perm/sec)   p_kst 3.047619e-04   p_cons 8.756357e-01   p_joint 4.636905e-04

Joint ci ratio: 1.424429e-01	ci left: 4.160201e-04	ci right 4.803865e-04	k: 756	n:1690000
Cons ci ratio: 1.136421e-03	ci left: 8.751323e-01	ci right 8.761280e-01	k: 1479816	n:1690000
KS ci ratio: 1.720424e-01	ci left: 2.806820e-04	ci right 3.340726e-04	k: 518	n:1690000
SOLH   1690000 perm   1389 sec   (1216 perm/sec)   p_kst 3.065089e-04   p_cons 8.756308e-01   p_joint 4.473373e-04

Joint ci ratio: 1.420680e-01	ci left: 4.158421e-04	ci right 4.799973e-04	k: 760	n:1700000
Cons ci ratio: 1.133120e-03	ci left: 8.751247e-01	ci right 8.761175e-01	k: 1488557	n:1700000
KS ci ratio: 1.713832e-01	ci left: 2.812827e-04	ci right 3.345615e-04	k: 522	n:1700000
SOLH   1700000 perm   1403 sec   (1212 perm/sec)   p_kst 3.070588e-04   p_cons 8.756218e-01   p_joint 4.470588e-04

Joint ci ratio: 1.419749e-01	ci left: 4.139743e-04	ci right 4.777959e-04	k: 761	n:1710000
Cons ci ratio: 1.129730e-03	ci left: 8.751401e-01	ci right 8.761299e-01	k: 1497337	n:1710000
KS ci ratio: 1.713834e-01	ci left: 2.796378e-04	ci right 3.326050e-04	k: 522	n:1710000
SOLH   1710000 perm   1417 sec   (1207 perm/sec)   p_kst 3.052632e-04   p_cons 8.756357e-01   p_joint 4.450292e-04

Joint ci ratio: 1.416038e-01	ci left: 4.138106e-04	ci right 4.774260e-04	k: 765	n:1720000
Cons ci ratio: 1.126397e-03	ci left: 8.751501e-01	ci right 8.761370e-01	k: 1506108	n:1720000
KS ci ratio: 1.710567e-01	ci left: 2.791249e-04	ci right 3.318838e-04	k: 524	n:1720000
SOLH   1720000 perm   1439 sec   (1195 perm/sec)   p_kst 3.046512e-04   p_cons 8.756442e-01   p_joint 4.447674e-04

Joint ci ratio: 1.407790e-01	ci left: 4.164372e-04	ci right 4.800523e-04	k: 774	n:1730000
Cons ci ratio: 1.123091e-03	ci left: 8.751606e-01	ci right 8.761445e-01	k: 1514880	n:1730000
KS ci ratio: 1.700874e-01	ci left: 2.808317e-04	ci right 3.335815e-04	k: 530	n:1730000
SOLH   1730000 perm   1453 sec   (1191 perm/sec)   p_kst 3.063584e-04   p_cons 8.756532e-01   p_joint 4.473988e-04

Joint ci ratio: 1.405073e-01	ci left: 4.157073e-04	ci right 4.790781e-04	k: 777	n:1740000
Cons ci ratio: 1.119875e-03	ci left: 8.751588e-01	ci right 8.761400e-01	k: 1523631	n:1740000
KS ci ratio: 1.697680e-01	ci left: 2.803182e-04	ci right 3.328626e-04	k: 532	n:1740000
SOLH   1740000 perm   1467 sec   (1186 perm/sec)   p_kst 3.057471e-04   p_cons 8.756500e-01   p_joint 4.465517e-04

Joint ci ratio: 1.399686e-01	ci left: 4.166401e-04	ci right 4.798893e-04	k: 783	n:1750000
Cons ci ratio: 1.116529e-03	ci left: 8.751880e-01	ci right 8.761662e-01	k: 1532436	n:1750000
KS ci ratio: 1.692922e-01	ci left: 2.803580e-04	ci right 3.327475e-04	k: 535	n:1750000
SOLH   1750000 perm   1481 sec   (1182 perm/sec)   p_kst 3.057143e-04   p_cons 8.756777e-01   p_joint 4.474286e-04

Joint ci ratio: 1.391719e-01	ci left: 4.192080e-04	ci right 4.824547e-04	k: 792	n:1760000
Cons ci ratio: 1.113508e-03	ci left: 8.751587e-01	ci right 8.761343e-01	k: 1541139	n:1760000
KS ci ratio: 1.680426e-01	ci left: 2.831186e-04	ci right 3.355940e-04	k: 543	n:1760000
SOLH   1760000 perm   1495 sec   (1177 perm/sec)   p_kst 3.085227e-04   p_cons 8.756472e-01   p_joint 4.500000e-04

Joint ci ratio: 1.357065e-01	ci left: 4.392074e-04	ci right 5.036883e-04	k: 833	n:1770000
Cons ci ratio: 1.110337e-03	ci left: 8.751644e-01	ci right 8.761372e-01	k: 1549903	n:1770000
KS ci ratio: 1.674281e-01	ci left: 2.836841e-04	ci right 3.360527e-04	k: 547	n:1770000
SOLH   1770000 perm   1510 sec   (1172 perm/sec)   p_kst 3.090395e-04   p_cons 8.756514e-01   p_joint 4.706215e-04

Joint ci ratio: 1.356253e-01	ci left: 4.372826e-04	ci right 5.014395e-04	k: 834	n:1780000
Cons ci ratio: 1.107101e-03	ci left: 8.751880e-01	ci right 8.761580e-01	k: 1558699	n:1780000
KS ci ratio: 1.674283e-01	ci left: 2.820904e-04	ci right 3.341648e-04	k: 547	n:1780000
SOLH   1780000 perm   1524 sec   (1168 perm/sec)   p_kst 3.073034e-04   p_cons 8.756736e-01   p_joint 4.685393e-04

Joint ci ratio: 1.353824e-01	ci left: 4.364588e-04	ci right 5.003709e-04	k: 837	n:1790000
Cons ci ratio: 1.103963e-03	ci left: 8.751973e-01	ci right 8.761646e-01	k: 1567470	n:1790000
KS ci ratio: 1.669719e-01	ci left: 2.821203e-04	ci right 3.340440e-04	k: 550	n:1790000
SOLH   1790000 perm   1539 sec   (1163 perm/sec)   p_kst 3.072626e-04   p_cons 8.756816e-01   p_joint 4.675978e-04

Joint ci ratio: 1.350605e-01	ci left: 4.361811e-04	ci right 4.998884e-04	k: 841	n:1800000
Cons ci ratio: 1.100867e-03	ci left: 8.752038e-01	ci right 8.761683e-01	k: 1576236	n:1800000
KS ci ratio: 1.665192e-01	ci left: 2.821501e-04	ci right 3.339243e-04	k: 553	n:1800000
SOLH   1800000 perm   1554 sec   (1159 perm/sec)   p_kst 3.072222e-04   p_cons 8.756867e-01   p_joint 4.672222e-04

Joint ci ratio: 1.344233e-01	ci left: 4.380422e-04	ci right 5.016954e-04	k: 849	n:1810000
Cons ci ratio: 1.097788e-03	ci left: 8.752118e-01	ci right 8.761737e-01	k: 1585005	n:1810000
KS ci ratio: 1.656246e-01	ci left: 2.837684e-04	ci right 3.355320e-04	k: 559	n:1810000
SOLH   1810000 perm   1568 sec   (1154 perm/sec)   p_kst 3.088398e-04   p_cons 8.756934e-01   p_joint 4.690608e-04

Joint ci ratio: 1.340296e-01	ci left: 4.382904e-04	ci right 5.017783e-04	k: 854	n:1820000
Cons ci ratio: 1.094872e-03	ci left: 8.751923e-01	ci right 8.761516e-01	k: 1593724	n:1820000
KS ci ratio: 1.651827e-01	ci left: 2.837894e-04	ci right 3.354049e-04	k: 562	n:1820000
SOLH   1820000 perm   1583 sec   (1150 perm/sec)   p_kst 3.087912e-04   p_cons 8.756725e-01   p_joint 4.692308e-04

Joint ci ratio: 1.336394e-01	ci left: 4.385361e-04	ci right 5.018600e-04	k: 859	n:1830000
Cons ci ratio: 1.091895e-03	ci left: 8.751899e-01	ci right 8.761466e-01	k: 1602474	n:1830000
KS ci ratio: 1.650363e-01	ci left: 2.827625e-04	ci right 3.341411e-04	k: 563	n:1830000
SOLH   1830000 perm   1597 sec   (1146 perm/sec)   p_kst 3.076503e-04   p_cons 8.756689e-01   p_joint 4.693989e-04

Joint ci ratio: 1.334070e-01	ci left: 4.377287e-04	ci right 5.008173e-04	k: 862	n:1840000
Cons ci ratio: 1.088999e-03	ci left: 8.751762e-01	ci right 8.761303e-01	k: 1611203	n:1840000
KS ci ratio: 1.650364e-01	ci left: 2.812257e-04	ci right 3.323252e-04	k: 563	n:1840000
SOLH   1840000 perm   1613 sec   (1141 perm/sec)   p_kst 3.059783e-04   p_cons 8.756538e-01   p_joint 4.684783e-04

Joint ci ratio: 1.330222e-01	ci left: 4.379753e-04	ci right 5.009029e-04	k: 867	n:1850000
Cons ci ratio: 1.086059e-03	ci left: 8.751761e-01	ci right 8.761276e-01	k: 1619957	n:1850000
KS ci ratio: 1.647446e-01	ci left: 2.807420e-04	ci right 3.316545e-04	k: 565	n:1850000
SOLH   1850000 perm   1639 sec   (1129 perm/sec)   p_kst 3.054054e-04   p_cons 8.756524e-01   p_joint 4.686486e-04

Joint ci ratio: 1.325648e-01	ci left: 4.387392e-04	ci right 5.015428e-04	k: 873	n:1860000
Cons ci ratio: 1.083140e-03	ci left: 8.751765e-01	ci right 8.761255e-01	k: 1628712	n:1860000
KS ci ratio: 1.640217e-01	ci left: 2.818102e-04	ci right 3.326700e-04	k: 570	n:1860000
SOLH   1860000 perm   1653 sec   (1125 perm/sec)   p_kst 3.064516e-04   p_cons 8.756516e-01   p_joint 4.693548e-04

Joint ci ratio: 1.323379e-01	ci left: 4.379441e-04	ci right 5.005182e-04	k: 876	n:1870000
Cons ci ratio: 1.080217e-03	ci left: 8.751824e-01	ci right 8.761288e-01	k: 1637477	n:1870000
KS ci ratio: 1.635925e-01	ci left: 2.818418e-04	ci right 3.325610e-04	k: 573	n:1870000
SOLH   1870000 perm   1668 sec   (1121 perm/sec)   p_kst 3.064171e-04   p_cons 8.756561e-01   p_joint 4.684492e-04

Joint ci ratio: 1.315896e-01	ci left: 4.407582e-04	ci right 5.033504e-04	k: 886	n:1880000
Cons ci ratio: 1.077245e-03	ci left: 8.752030e-01	ci right 8.761469e-01	k: 1646270	n:1880000
KS ci ratio: 1.627440e-01	ci left: 2.834038e-04	ci right 3.341138e-04	k: 579	n:1880000
SOLH   1880000 perm   1683 sec   (1117 perm/sec)   p_kst 3.079787e-04   p_cons 8.756755e-01   p_joint 4.712766e-04

Joint ci ratio: 1.315156e-01	ci left: 4.389378e-04	ci right 5.012338e-04	k: 887	n:1890000
Cons ci ratio: 1.074489e-03	ci left: 8.751843e-01	ci right 8.761257e-01	k: 1654989	n:1890000
KS ci ratio: 1.626040e-01	ci left: 2.824118e-04	ci right 3.328966e-04	k: 580	n:1890000
SOLH   1890000 perm   1697 sec   (1113 perm/sec)   p_kst 3.068783e-04   p_cons 8.756556e-01   p_joint 4.693122e-04

Joint ci ratio: 1.312941e-01	ci left: 4.381547e-04	ci right 5.002265e-04	k: 890	n:1900000
Cons ci ratio: 1.071841e-03	ci left: 8.751483e-01	ci right 8.760874e-01	k: 1663675	n:1900000
KS ci ratio: 1.624643e-01	ci left: 2.814304e-04	ci right 3.316922e-04	k: 581	n:1900000
SOLH   1900000 perm   1712 sec   (1110 perm/sec)   p_kst 3.057895e-04   p_cons 8.756184e-01   p_joint 4.684211e-04

Joint ci ratio: 1.312206e-01	ci left: 4.363670e-04	ci right 4.981483e-04	k: 891	n:1910000
Cons ci ratio: 1.069093e-03	ci left: 8.751369e-01	ci right 8.760735e-01	k: 1672407	n:1910000
KS ci ratio: 1.623250e-01	ci left: 2.804592e-04	ci right 3.305005e-04	k: 582	n:1910000
SOLH   1910000 perm   1727 sec   (1106 perm/sec)   p_kst 3.047120e-04   p_cons 8.756058e-01   p_joint 4.664921e-04

Joint ci ratio: 1.307815e-01	ci left: 4.371169e-04	ci right 4.987811e-04	k: 897	n:1920000
Cons ci ratio: 1.066301e-03	ci left: 8.751391e-01	ci right 8.760733e-01	k: 1681165	n:1920000
KS ci ratio: 1.617709e-01	ci left: 2.809973e-04	ci right 3.309468e-04	k: 586	n:1920000
SOLH   1920000 perm   1742 sec   (1102 perm/sec)   p_kst 3.052083e-04   p_cons 8.756068e-01   p_joint 4.671875e-04

Joint ci ratio: 1.302027e-01	ci left: 4.388618e-04	ci right 5.004770e-04	k: 905	n:1930000
Cons ci ratio: 1.063628e-03	ci left: 8.751211e-01	ci right 8.760529e-01	k: 1689884	n:1930000
KS ci ratio: 1.608148e-01	ci left: 2.830219e-04	ci right 3.330053e-04	k: 593	n:1930000
SOLH   1930000 perm   1757 sec   (1098 perm/sec)   p_kst 3.072539e-04   p_cons 8.755876e-01   p_joint 4.689119e-04

Joint ci ratio: 1.297736e-01	ci left: 4.395919e-04	ci right 5.010906e-04	k: 911	n:1940000
Cons ci ratio: 1.060740e-03	ci left: 8.751518e-01	ci right 8.760811e-01	k: 1698697	n:1940000
KS ci ratio: 1.602760e-01	ci left: 2.835421e-04	ci right 3.334334e-04	k: 597	n:1940000
SOLH   1940000 perm   1773 sec   (1094 perm/sec)   p_kst 3.077320e-04   p_cons 8.756170e-01   p_joint 4.695876e-04

Joint ci ratio: 1.292080e-01	ci left: 4.413072e-04	ci right 5.027562e-04	k: 919	n:1950000
Cons ci ratio: 1.057963e-03	ci left: 8.751642e-01	ci right 8.760911e-01	k: 1707475	n:1950000
KS ci ratio: 1.596100e-01	ci left: 2.845495e-04	ci right 3.343901e-04	k: 602	n:1950000
SOLH   1950000 perm   1788 sec   (1091 perm/sec)   p_kst 3.087179e-04   p_cons 8.756282e-01   p_joint 4.712821e-04

Joint ci ratio: 1.290679e-01	ci left: 4.400431e-04	ci right 5.012445e-04	k: 921	n:1960000
Cons ci ratio: 1.055164e-03	ci left: 8.751852e-01	ci right 8.761096e-01	k: 1716270	n:1960000
KS ci ratio: 1.593460e-01	ci left: 2.840774e-04	ci right 3.337451e-04	k: 604	n:1960000
SOLH   1960000 perm   1803 sec   (1087 perm/sec)   p_kst 3.081633e-04   p_cons 8.756480e-01   p_joint 4.698980e-04

Joint ci ratio: 1.287194e-01	ci left: 4.402656e-04	ci right 5.013200e-04	k: 926	n:1970000
Cons ci ratio: 1.052487e-03	ci left: 8.751856e-01	ci right 8.761077e-01	k: 1725025	n:1970000
KS ci ratio: 1.590833e-01	ci left: 2.836102e-04	ci right 3.331066e-04	k: 606	n:1970000
SOLH   1970000 perm   1819 sec   (1083 perm/sec)   p_kst 3.076142e-04   p_cons 8.756472e-01   p_joint 4.700508e-04

Joint ci ratio: 1.283048e-01	ci left: 4.409749e-04	ci right 5.019157e-04	k: 932	n:1980000
Cons ci ratio: 1.049926e-03	ci left: 8.751658e-01	ci right 8.760856e-01	k: 1733740	n:1980000
KS ci ratio: 1.586917e-01	ci left: 2.836327e-04	ci right 3.329996e-04	k: 609	n:1980000
SOLH   1980000 perm   1834 sec   (1079 perm/sec)   p_kst 3.075758e-04   p_cons 8.756263e-01   p_joint 4.707071e-04

Joint ci ratio: 1.277581e-01	ci left: 4.426504e-04	ci right 5.035423e-04	k: 940	n:1990000
Cons ci ratio: 1.047233e-03	ci left: 8.751779e-01	ci right 8.760954e-01	k: 1742518	n:1990000
KS ci ratio: 1.577888e-01	ci left: 2.855857e-04	ci right 3.349830e-04	k: 616	n:1990000
SOLH   1990000 perm   1850 sec   (1076 perm/sec)   p_kst 3.095477e-04   p_cons 8.756372e-01   p_joint 4.723618e-04

Joint ci ratio: 1.274874e-01	ci left: 4.423732e-04	ci right 5.030884e-04	k: 944	n:2000000
Cons ci ratio: 1.044622e-03	ci left: 8.751769e-01	ci right 8.760921e-01	k: 1751270	n:2000000
KS ci ratio: 1.575337e-01	ci left: 2.851183e-04	ci right 3.343475e-04	k: 618	n:2000000
SOLH   2000000 perm   1866 sec   (1072 perm/sec)   p_kst 3.090000e-04   p_cons 8.756350e-01   p_joint 4.720000e-04

Joint ci ratio: 1.270846e-01	ci left: 4.430624e-04	ci right 5.036655e-04	k: 950	n:2010000
Cons ci ratio: 1.042073e-03	ci left: 8.751669e-01	ci right 8.760798e-01	k: 1760004	n:2010000
KS ci ratio: 1.570271e-01	ci left: 2.856116e-04	ci right 3.347524e-04	k: 622	n:2010000
SOLH   2010000 perm   1881 sec   (1068 perm/sec)   p_kst 3.094527e-04   p_cons 8.756239e-01   p_joint 4.726368e-04

Joint ci ratio: 1.268847e-01	ci left: 4.423070e-04	ci right 5.027045e-04	k: 953	n:2020000
Cons ci ratio: 1.039543e-03	ci left: 8.751570e-01	ci right 8.760677e-01	k: 1768738	n:2020000
KS ci ratio: 1.567757e-01	ci left: 2.851489e-04	ci right 3.341241e-04	k: 624	n:2020000
SOLH   2020000 perm   1897 sec   (1065 perm/sec)   p_kst 3.089109e-04   p_cons 8.756129e-01   p_joint 4.717822e-04

Joint ci ratio: 1.264216e-01	ci left: 4.434672e-04	ci right 5.037855e-04	k: 960	n:2030000
Cons ci ratio: 1.036961e-03	ci left: 8.751620e-01	ci right 8.760704e-01	k: 1777502	n:2030000
KS ci ratio: 1.561523e-01	ci left: 2.861108e-04	ci right 3.350376e-04	k: 629	n:2030000
SOLH   2030000 perm   1913 sec   (1061 perm/sec)   p_kst 3.098522e-04   p_cons 8.756167e-01   p_joint 4.729064e-04

Joint ci ratio: 1.260940e-01	ci left: 4.436669e-04	ci right 5.038443e-04	k: 965	n:2040000
Cons ci ratio: 1.034356e-03	ci left: 8.751758e-01	ci right 8.760820e-01	k: 1786284	n:2040000
KS ci ratio: 1.555362e-01	ci left: 2.870637e-04	ci right 3.359417e-04	k: 634	n:2040000
SOLH   2040000 perm   1929 sec   (1057 perm/sec)   p_kst 3.107843e-04   p_cons 8.756294e-01   p_joint 4.730392e-04

Joint ci ratio: 1.259638e-01	ci left: 4.424475e-04	ci right 5.023929e-04	k: 967	n:2050000
Cons ci ratio: 1.031896e-03	ci left: 8.751631e-01	ci right 8.760671e-01	k: 1795012	n:2050000
KS ci ratio: 1.552919e-01	ci left: 2.866011e-04	ci right 3.353165e-04	k: 636	n:2050000
SOLH   2050000 perm   1945 sec   (1054 perm/sec)   p_kst 3.102439e-04   p_cons 8.756156e-01   p_joint 4.717073e-04

Joint ci ratio: 1.256397e-01	ci left: 4.426505e-04	ci right 5.024577e-04	k: 972	n:2060000
Cons ci ratio: 1.029423e-03	ci left: 8.751568e-01	ci right 8.760586e-01	k: 1803753	n:2060000
KS ci ratio: 1.549275e-01	ci left: 2.866096e-04	ci right 3.352016e-04	k: 639	n:2060000
SOLH   2060000 perm   1961 sec   (1050 perm/sec)   p_kst 3.101942e-04   p_cons 8.756083e-01   p_joint 4.718447e-04

Joint ci ratio: 1.254465e-01	ci left: 4.419159e-04	ci right 5.015251e-04	k: 975	n:2070000
Cons ci ratio: 1.026922e-03	ci left: 8.751603e-01	ci right 8.760599e-01	k: 1812514	n:2070000
KS ci ratio: 1.548067e-01	ci left: 2.856894e-04	ci right 3.340840e-04	k: 640	n:2070000
SOLH   2070000 perm   1977 sec   (1047 perm/sec)   p_kst 3.091787e-04   p_cons 8.756106e-01   p_joint 4.710145e-04

Joint ci ratio: 1.251903e-01	ci left: 4.416541e-04	ci right 5.010973e-04	k: 979	n:2080000
Cons ci ratio: 1.024410e-03	ci left: 8.751700e-01	ci right 8.760674e-01	k: 1821288	n:2080000
KS ci ratio: 1.546861e-01	ci left: 2.847780e-04	ci right 3.329773e-04	k: 641	n:2080000
SOLH   2080000 perm   1994 sec   (1043 perm/sec)   p_kst 3.081731e-04   p_cons 8.756192e-01   p_joint 4.706731e-04

Joint ci ratio: 1.248088e-01	ci left: 4.423219e-04	ci right 5.016602e-04	k: 985	n:2090000
Cons ci ratio: 1.021925e-03	ci left: 8.751777e-01	ci right 8.760730e-01	k: 1830058	n:2090000
KS ci ratio: 1.543260e-01	ci left: 2.847954e-04	ci right 3.328749e-04	k: 644	n:2090000
SOLH   2090000 perm   2010 sec   (1040 perm/sec)   p_kst 3.081340e-04   p_cons 8.756258e-01   p_joint 4.712919e-04

Joint ci ratio: 1.243680e-01	ci left: 4.434451e-04	ci right 5.027085e-04	k: 992	n:2100000
Cons ci ratio: 1.019425e-03	ci left: 8.751925e-01	ci right 8.760856e-01	k: 1838843	n:2100000
KS ci ratio: 1.538496e-01	ci left: 2.852705e-04	ci right 3.332679e-04	k: 648	n:2100000
SOLH   2100000 perm   2026 sec   (1036 perm/sec)   p_kst 3.085714e-04   p_cons 8.756395e-01   p_joint 4.723810e-04

Joint ci ratio: 1.239939e-01	ci left: 4.440987e-04	ci right 5.032579e-04	k: 998	n:2110000
Cons ci ratio: 1.016950e-03	ci left: 8.752057e-01	ci right 8.760966e-01	k: 1847625	n:2110000
KS ci ratio: 1.533777e-01	ci left: 2.857414e-04	ci right 3.336570e-04	k: 652	n:2110000
SOLH   2110000 perm   2043 sec   (1033 perm/sec)   p_kst 3.090047e-04   p_cons 8.756517e-01   p_joint 4.729858e-04

Joint ci ratio: 1.235617e-01	ci left: 4.452036e-04	ci right 5.042880e-04	k: 1005	n:2120000
Cons ci ratio: 1.014710e-03	ci left: 8.751720e-01	ci right 8.760609e-01	k: 1856308	n:2120000
KS ci ratio: 1.525620e-01	ci left: 2.875691e-04	ci right 3.355113e-04	k: 659	n:2120000
SOLH   2120000 perm   2059 sec   (1029 perm/sec)   p_kst 3.108491e-04   p_cons 8.756170e-01   p_joint 4.740566e-04

Joint ci ratio: 1.230732e-01	ci left: 4.467535e-04	ci right 5.057921e-04	k: 1013	n:2130000
Cons ci ratio: 1.012367e-03	ci left: 8.751640e-01	ci right 8.760509e-01	k: 1865045	n:2130000
KS ci ratio: 1.517592e-01	ci left: 2.893803e-04	ci right 3.373475e-04	k: 666	n:2130000
SOLH   2130000 perm   2076 sec   (1026 perm/sec)   p_kst 3.126761e-04   p_cons 8.756080e-01   p_joint 4.755869e-04

Joint ci ratio: 1.226505e-01	ci left: 4.478364e-04	ci right 5.068001e-04	k: 1020	n:2140000
Cons ci ratio: 1.010021e-03	ci left: 8.751603e-01	ci right 8.760452e-01	k: 1873791	n:2140000
KS ci ratio: 1.511935e-01	ci left: 2.902759e-04	ci right 3.381961e-04	k: 671	n:2140000
SOLH   2140000 perm   2093 sec   (1022 perm/sec)   p_kst 3.135514e-04   p_cons 8.756033e-01   p_joint 4.766355e-04

Joint ci ratio: 1.224708e-01	ci left: 4.471060e-04	ci right 5.058810e-04	k: 1023	n:2150000
Cons ci ratio: 1.007641e-03	ci left: 8.751674e-01	ci right 8.760502e-01	k: 1882560	n:2150000
KS ci ratio: 1.509691e-01	ci left: 2.898209e-04	ci right 3.375884e-04	k: 673	n:2150000
SOLH   2150000 perm   2110 sec   (1019 perm/sec)   p_kst 3.130233e-04   p_cons 8.756093e-01   p_joint 4.758140e-04

Joint ci ratio: 1.244943e-01	ci left: 4.302299e-04	ci right 4.877898e-04	k: 990	n:2160000
Cons ci ratio: 1.005343e-03	ci left: 8.751605e-01	ci right 8.760412e-01	k: 1891299	n:2160000
KS ci ratio: 1.505230e-01	ci left: 2.902611e-04	ci right 3.379472e-04	k: 677	n:2160000
SOLH   2160000 perm   2127 sec   (1016 perm/sec)   p_kst 3.134259e-04   p_cons 8.756014e-01   p_joint 4.583333e-04

Joint ci ratio: 1.243063e-01	ci left: 4.295867e-04	ci right 4.869675e-04	k: 993	n:2170000
Cons ci ratio: 1.003002e-03	ci left: 8.751662e-01	ci right 8.760448e-01	k: 1900065	n:2170000
KS ci ratio: 1.501911e-01	ci left: 2.902540e-04	ci right 3.378243e-04	k: 680	n:2170000
SOLH   2170000 perm   2144 sec   (1012 perm/sec)   p_kst 3.133641e-04   p_cons 8.756060e-01   p_joint 4.576037e-04

Joint ci ratio: 1.240570e-01	ci left: 4.293940e-04	ci right 4.866255e-04	k: 997	n:2180000
Cons ci ratio: 1.000630e-03	ci left: 8.751823e-01	ci right 8.760589e-01	k: 1908854	n:2180000
KS ci ratio: 1.498614e-01	ci left: 2.902470e-04	ci right 3.377024e-04	k: 683	n:2180000
SOLH   2180000 perm   2161 sec   (1009 perm/sec)   p_kst 3.133028e-04   p_cons 8.756211e-01   p_joint 4.573394e-04

Joint ci ratio: 1.237474e-01	ci left: 4.296457e-04	ci right 4.867573e-04	k: 1002	n:2190000
Cons ci ratio: 9.983641e-04	ci left: 8.751786e-01	ci right 8.760533e-01	k: 1917600	n:2190000
KS ci ratio: 1.494251e-01	ci left: 2.906798e-04	ci right 3.380552e-04	k: 687	n:2190000
SOLH   2190000 perm   2178 sec   (1006 perm/sec)   p_kst 3.136986e-04   p_cons 8.756164e-01   p_joint 4.575342e-04

Joint ci ratio: 1.234401e-01	ci left: 4.298952e-04	ci right 4.868877e-04	k: 1007	n:2200000
Cons ci ratio: 9.961094e-04	ci left: 8.751759e-01	ci right 8.760486e-01	k: 1926348	n:2200000
KS ci ratio: 1.491004e-01	ci left: 2.906713e-04	ci right 3.379331e-04	k: 690	n:2200000
SOLH   2200000 perm   2196 sec   (1002 perm/sec)   p_kst 3.136364e-04   p_cons 8.756127e-01   p_joint 4.577273e-04

Joint ci ratio: 1.231959e-01	ci left: 4.297041e-04	ci right 4.865504e-04	k: 1011	n:2210000
Cons ci ratio: 9.937276e-04	ci left: 8.752045e-01	ci right 8.760751e-01	k: 1935165	n:2210000
KS ci ratio: 1.486707e-01	ci left: 2.910985e-04	ci right 3.382813e-04	k: 694	n:2210000
SOLH   2210000 perm   2214 sec   (998 perm/sec)   p_kst 3.140271e-04   p_cons 8.756403e-01   p_joint 4.574661e-04

Joint ci ratio: 1.229532e-01	ci left: 4.295148e-04	ci right 4.862159e-04	k: 1015	n:2220000
Cons ci ratio: 9.914406e-04	ci left: 8.752157e-01	ci right 8.760843e-01	k: 1943944	n:2220000
KS ci ratio: 1.483508e-01	ci left: 2.910884e-04	ci right 3.381591e-04	k: 697	n:2220000
SOLH   2220000 perm   2231 sec   (995 perm/sec)   p_kst 3.139640e-04   p_cons 8.756505e-01   p_joint 4.572072e-04

Joint ci ratio: 1.226517e-01	ci left: 4.297620e-04	ci right 4.863466e-04	k: 1020	n:2230000
Cons ci ratio: 9.892670e-04	ci left: 8.752052e-01	ci right 8.760719e-01	k: 1952675	n:2230000
KS ci ratio: 1.479275e-01	ci left: 2.915103e-04	ci right 3.385028e-04	k: 701	n:2230000
SOLH   2230000 perm   2248 sec   (992 perm/sec)   p_kst 3.143498e-04   p_cons 8.756390e-01   p_joint 4.573991e-04

Joint ci ratio: 1.224122e-01	ci left: 4.295744e-04	ci right 4.860158e-04	k: 1024	n:2240000
Cons ci ratio: 9.870208e-04	ci left: 8.752140e-01	ci right 8.760787e-01	k: 1961449	n:2240000
KS ci ratio: 1.476125e-01	ci left: 2.914987e-04	ci right 3.383804e-04	k: 704	n:2240000
SOLH   2240000 perm   2266 sec   (989 perm/sec)   p_kst 3.142857e-04   p_cons 8.756469e-01   p_joint 4.571429e-04

Joint ci ratio: 1.220554e-01	ci left: 4.302503e-04	ci right 4.866039e-04	k: 1030	n:2250000
Cons ci ratio: 9.849223e-04	ci left: 8.751934e-01	ci right 8.760563e-01	k: 1970157	n:2250000
KS ci ratio: 1.471955e-01	ci left: 2.919154e-04	ci right 3.387198e-04	k: 708	n:2250000
SOLH   2250000 perm   2283 sec   (985 perm/sec)   p_kst 3.146667e-04   p_cons 8.756253e-01   p_joint 4.577778e-04

Joint ci ratio: 1.219964e-01	ci left: 4.287755e-04	ci right 4.849068e-04	k: 1031	n:2260000
Cons ci ratio: 9.827274e-04	ci left: 8.751974e-01	ci right 8.760583e-01	k: 1978920	n:2260000
KS ci ratio: 1.470918e-01	ci left: 2.910499e-04	ci right 3.376798e-04	k: 709	n:2260000
SOLH   2260000 perm   2301 sec   (982 perm/sec)   p_kst 3.137168e-04   p_cons 8.756283e-01   p_joint 4.561947e-04

Joint ci ratio: 1.215262e-01	ci left: 4.303035e-04	ci right 4.864021e-04	k: 1039	n:2270000
Cons ci ratio: 9.805927e-04	ci left: 8.751911e-01	ci right 8.760502e-01	k: 1987660	n:2270000
KS ci ratio: 1.464741e-01	ci left: 2.923138e-04	ci right 3.389324e-04	k: 715	n:2270000
SOLH   2270000 perm   2319 sec   (979 perm/sec)   p_kst 3.149780e-04   p_cons 8.756211e-01   p_joint 4.577093e-04

Joint ci ratio: 1.214096e-01	ci left: 4.292668e-04	ci right 4.851726e-04	k: 1041	n:2280000
Cons ci ratio: 9.784128e-04	ci left: 8.751981e-01	ci right 8.760553e-01	k: 1996430	n:2280000
KS ci ratio: 1.463720e-01	ci left: 2.914543e-04	ci right 3.379005e-04	k: 716	n:2280000
SOLH   2280000 perm   2336 sec   (976 perm/sec)   p_kst 3.140351e-04   p_cons 8.756272e-01   p_joint 4.565789e-04

Joint ci ratio: 1.211772e-01	ci left: 4.290860e-04	ci right 4.848537e-04	k: 1045	n:2290000
Cons ci ratio: 9.762943e-04	ci left: 8.751946e-01	ci right 8.760499e-01	k: 2005176	n:2290000
KS ci ratio: 1.462701e-01	ci left: 2.906022e-04	ci right 3.368776e-04	k: 717	n:2290000
SOLH   2290000 perm   2354 sec   (973 perm/sec)   p_kst 3.131004e-04   p_cons 8.756227e-01   p_joint 4.563319e-04

Joint ci ratio: 1.211194e-01	ci left: 4.276420e-04	ci right 4.831936e-04	k: 1046	n:2300000
Cons ci ratio: 9.741797e-04	ci left: 8.751932e-01	ci right 8.760467e-01	k: 2013927	n:2300000
KS ci ratio: 1.461684e-01	ci left: 2.897576e-04	ci right 3.358636e-04	k: 718	n:2300000
SOLH   2300000 perm   2372 sec   (970 perm/sec)   p_kst 3.121739e-04   p_cons 8.756204e-01   p_joint 4.547826e-04

Joint ci ratio: 1.208312e-01	ci left: 4.278897e-04	ci right 4.833318e-04	k: 1051	n:2310000
Cons ci ratio: 9.720499e-04	ci left: 8.751984e-01	ci right 8.760500e-01	k: 2022693	n:2310000
KS ci ratio: 1.458645e-01	ci left: 2.897545e-04	ci right 3.357558e-04	k: 721	n:2310000
SOLH   2310000 perm   2389 sec   (967 perm/sec)   p_kst 3.121212e-04   p_cons 8.756247e-01   p_joint 4.549784e-04

Joint ci ratio: 1.206022e-01	ci left: 4.277174e-04	ci right 4.830247e-04	k: 1055	n:2320000
Cons ci ratio: 9.699877e-04	ci left: 8.751915e-01	ci right 8.760412e-01	k: 2031431	n:2320000
KS ci ratio: 1.455624e-01	ci left: 2.897515e-04	ci right 3.356488e-04	k: 724	n:2320000
SOLH   2320000 perm   2407 sec   (964 perm/sec)   p_kst 3.120690e-04   p_cons 8.756168e-01   p_joint 4.547414e-04

Joint ci ratio: 1.203744e-01	ci left: 4.275467e-04	ci right 4.827201e-04	k: 1059	n:2330000
Cons ci ratio: 9.678204e-04	ci left: 8.752112e-01	ci right 8.760591e-01	k: 2040231	n:2330000
KS ci ratio: 1.452621e-01	ci left: 2.897487e-04	ci right 3.355426e-04	k: 727	n:2330000
SOLH   2330000 perm   2425 sec   (961 perm/sec)   p_kst 3.120172e-04   p_cons 8.756356e-01   p_joint 4.545064e-04

Joint ci ratio: 1.202045e-01	ci left: 4.269631e-04	ci right 4.819778e-04	k: 1062	n:2340000
Cons ci ratio: 9.657584e-04	ci left: 8.752103e-01	ci right 8.760563e-01	k: 2048983	n:2340000
KS ci ratio: 1.451625e-01	ci left: 2.889223e-04	ci right 3.345515e-04	k: 728	n:2340000
SOLH   2340000 perm   2443 sec   (958 perm/sec)   p_kst 3.111111e-04   p_cons 8.756338e-01   p_joint 4.538462e-04

Joint ci ratio: 1.197546e-01	ci left: 4.284483e-04	ci right 4.834332e-04	k: 1070	n:2350000
Cons ci ratio: 9.636437e-04	ci left: 8.752242e-01	ci right 8.760685e-01	k: 2057770	n:2350000
KS ci ratio: 1.445687e-01	ci left: 2.901535e-04	ci right 3.357735e-04	k: 734	n:2350000
SOLH   2350000 perm   2461 sec   (955 perm/sec)   p_kst 3.123404e-04   p_cons 8.756468e-01   p_joint 4.553191e-04

Joint ci ratio: 1.196988e-01	ci left: 4.270439e-04	ci right 4.818211e-04	k: 1071	n:2360000
Cons ci ratio: 9.616906e-04	ci left: 8.752046e-01	ci right 8.760471e-01	k: 2066478	n:2360000
KS ci ratio: 1.445688e-01	ci left: 2.889240e-04	ci right 3.343508e-04	k: 734	n:2360000
SOLH   2360000 perm   2479 sec   (952 perm/sec)   p_kst 3.110169e-04   p_cons 8.756263e-01   p_joint 4.538136e-04

Joint ci ratio: 1.194206e-01	ci left: 4.272886e-04	ci right 4.819609e-04	k: 1076	n:2370000
Cons ci ratio: 9.596136e-04	ci left: 8.752159e-01	ci right 8.760566e-01	k: 2075259	n:2370000
KS ci ratio: 1.441770e-01	ci left: 2.893317e-04	ci right 3.346887e-04	k: 738	n:2370000
SOLH   2370000 perm   2502 sec   (947 perm/sec)   p_kst 3.113924e-04   p_cons 8.756367e-01   p_joint 4.540084e-04

Joint ci ratio: 1.190893e-01	ci left: 4.279391e-04	ci right 4.825320e-04	k: 1082	n:2380000
Cons ci ratio: 9.575370e-04	ci left: 8.752301e-01	ci right 8.760690e-01	k: 2084047	n:2380000
KS ci ratio: 1.435952e-01	ci left: 2.905463e-04	ci right 3.358941e-04	k: 744	n:2380000
SOLH   2380000 perm   2520 sec   (944 perm/sec)   p_kst 3.126050e-04   p_cons 8.756500e-01   p_joint 4.546218e-04

Joint ci ratio: 1.189248e-01	ci left: 4.273664e-04	ci right 4.818057e-04	k: 1085	n:2390000
Cons ci ratio: 9.555106e-04	ci left: 8.752358e-01	ci right 8.760729e-01	k: 2092815	n:2390000
KS ci ratio: 1.433069e-01	ci left: 2.905408e-04	ci right 3.357890e-04	k: 747	n:2390000
SOLH   2390000 perm   2539 sec   (941 perm/sec)   p_kst 3.125523e-04   p_cons 8.756548e-01   p_joint 4.539749e-04

Joint ci ratio: 1.186519e-01	ci left: 4.276072e-04	ci right 4.819433e-04	k: 1090	n:2400000
Cons ci ratio: 9.535517e-04	ci left: 8.752289e-01	ci right 8.760643e-01	k: 2101553	n:2400000
KS ci ratio: 1.430204e-01	ci left: 2.905354e-04	ci right 3.356846e-04	k: 750	n:2400000
SOLH   2400000 perm   2558 sec   (938 perm/sec)   p_kst 3.125000e-04   p_cons 8.756471e-01   p_joint 4.541667e-04

Joint ci ratio: 1.184892e-01	ci left: 4.270408e-04	ci right 4.812253e-04	k: 1093	n:2410000
Cons ci ratio: 9.516229e-04	ci left: 8.752180e-01	ci right 8.760517e-01	k: 2110281	n:2410000
KS ci ratio: 1.427356e-01	ci left: 2.905302e-04	ci right 3.355810e-04	k: 753	n:2410000
SOLH   2410000 perm   2576 sec   (936 perm/sec)   p_kst 3.124481e-04   p_cons 8.756353e-01   p_joint 4.535270e-04

Joint ci ratio: 1.182193e-01	ci left: 4.272811e-04	ci right 4.813640e-04	k: 1098	n:2420000
Cons ci ratio: 9.497274e-04	ci left: 8.752021e-01	ci right 8.760341e-01	k: 2118997	n:2420000
KS ci ratio: 1.425467e-01	ci left: 2.901266e-04	ci right 3.350502e-04	k: 755	n:2420000
SOLH   2420000 perm   2595 sec   (933 perm/sec)   p_kst 3.119835e-04   p_cons 8.756186e-01   p_joint 4.537190e-04

Joint ci ratio: 1.182194e-01	ci left: 4.255227e-04	ci right 4.793831e-04	k: 1098	n:2430000
Cons ci ratio: 9.477519e-04	ci left: 8.752075e-01	ci right 8.760377e-01	k: 2127764	n:2430000
KS ci ratio: 1.425468e-01	ci left: 2.889327e-04	ci right 3.336714e-04	k: 755	n:2430000
SOLH   2430000 perm   2613 sec   (930 perm/sec)   p_kst 3.106996e-04   p_cons 8.756230e-01   p_joint 4.518519e-04

Joint ci ratio: 1.180049e-01	ci left: 4.253697e-04	ci right 4.791062e-04	k: 1102	n:2440000
Cons ci ratio: 9.458971e-04	ci left: 8.751877e-01	ci right 8.760163e-01	k: 2136470	n:2440000
KS ci ratio: 1.422648e-01	ci left: 2.889342e-04	ci right 3.335772e-04	k: 758	n:2440000
SOLH   2440000 perm   2636 sec   (926 perm/sec)   p_kst 3.106557e-04   p_cons 8.756025e-01   p_joint 4.516393e-04

Joint ci ratio: 1.176852e-01	ci left: 4.260103e-04	ci right 4.796718e-04	k: 1108	n:2450000
Cons ci ratio: 9.439825e-04	ci left: 8.751845e-01	ci right 8.760114e-01	k: 2145216	n:2450000
KS ci ratio: 1.420778e-01	ci left: 2.885422e-04	ci right 3.330610e-04	k: 760	n:2450000
SOLH   2450000 perm   2656 sec   (922 perm/sec)   p_kst 3.102041e-04   p_cons 8.755984e-01   p_joint 4.522449e-04

Joint ci ratio: 1.174208e-01	ci left: 4.262513e-04	ci right 4.798141e-04	k: 1113	n:2460000
Cons ci ratio: 9.419757e-04	ci left: 8.752052e-01	ci right 8.760305e-01	k: 2154021	n:2460000
KS ci ratio: 1.418915e-01	ci left: 2.881534e-04	ci right 3.325490e-04	k: 762	n:2460000
SOLH   2460000 perm   2675 sec   (920 perm/sec)   p_kst 3.097561e-04   p_cons 8.756183e-01   p_joint 4.524390e-04

Joint ci ratio: 1.173156e-01	ci left: 4.253115e-04	ci right 4.787051e-04	k: 1115	n:2470000
Cons ci ratio: 9.400306e-04	ci left: 8.752145e-01	ci right 8.760380e-01	k: 2162798	n:2470000
KS ci ratio: 1.417059e-01	ci left: 2.877677e-04	ci right 3.320411e-04	k: 764	n:2470000
SOLH   2470000 perm   2697 sec   (916 perm/sec)   p_kst 3.093117e-04   p_cons 8.756267e-01   p_joint 4.514170e-04

Joint ci ratio: 1.171583e-01	ci left: 4.247707e-04	ci right 4.780199e-04	k: 1118	n:2480000
Cons ci ratio: 9.381165e-04	ci left: 8.752193e-01	ci right 8.760411e-01	k: 2171564	n:2480000
KS ci ratio: 1.415211e-01	ci left: 2.873853e-04	ci right 3.315372e-04	k: 766	n:2480000
SOLH   2480000 perm   2716 sec   (913 perm/sec)   p_kst 3.088710e-04   p_cons 8.756306e-01   p_joint 4.508065e-04

Joint ci ratio: 1.168454e-01	ci left: 4.254039e-04	ci right 4.785803e-04	k: 1124	n:2490000
Cons ci ratio: 9.361727e-04	ci left: 8.752337e-01	ci right 8.760538e-01	k: 2180354	n:2490000
KS ci ratio: 1.410620e-01	ci left: 2.881682e-04	ci right 3.322847e-04	k: 771	n:2490000
SOLH   2490000 perm   2735 sec   (910 perm/sec)   p_kst 3.096386e-04   p_cons 8.756442e-01   p_joint 4.514056e-04

Joint ci ratio: 1.166382e-01	ci left: 4.252556e-04	ci right 4.783127e-04	k: 1128	n:2500000
Cons ci ratio: 9.342786e-04	ci left: 8.752391e-01	ci right 8.760576e-01	k: 2189122	n:2500000
KS ci ratio: 1.408796e-01	ci left: 2.877873e-04	ci right 3.317838e-04	k: 773	n:2500000
SOLH   2500000 perm   2755 sec   (908 perm/sec)   p_kst 3.092000e-04   p_cons 8.756488e-01   p_joint 4.512000e-04

Joint ci ratio: 1.164322e-01	ci left: 4.251085e-04	ci right 4.780471e-04	k: 1132	n:2510000
Cons ci ratio: 9.323568e-04	ci left: 8.752537e-01	ci right 8.760705e-01	k: 2197913	n:2510000
KS ci ratio: 1.406980e-01	ci left: 2.874094e-04	ci right 3.312868e-04	k: 775	n:2510000
SOLH   2510000 perm   2774 sec   (905 perm/sec)   p_kst 3.087649e-04   p_cons 8.756625e-01   p_joint 4.509960e-04

Joint ci ratio: 1.161761e-01	ci left: 4.253480e-04	ci right 4.781919e-04	k: 1137	n:2520000
Cons ci ratio: 9.305197e-04	ci left: 8.752511e-01	ci right 8.760663e-01	k: 2206661	n:2520000
KS ci ratio: 1.403368e-01	ci left: 2.878004e-04	ci right 3.316152e-04	k: 779	n:2520000
SOLH   2520000 perm   2793 sec   (902 perm/sec)   p_kst 3.091270e-04   p_cons 8.756591e-01   p_joint 4.511905e-04

Joint ci ratio: 1.159725e-01	ci left: 4.252019e-04	ci right 4.779287e-04	k: 1141	n:2530000
Cons ci ratio: 9.286327e-04	ci left: 8.752628e-01	ci right 8.760763e-01	k: 2215445	n:2530000
KS ci ratio: 1.401572e-01	ci left: 2.874257e-04	ci right 3.311227e-04	k: 781	n:2530000
SOLH   2530000 perm   2812 sec   (900 perm/sec)   p_kst 3.086957e-04   p_cons 8.756700e-01   p_joint 4.509881e-04

Joint ci ratio: 1.156186e-01	ci left: 4.262040e-04	ci right 4.788828e-04	k: 1148	n:2540000
Cons ci ratio: 9.268023e-04	ci left: 8.752637e-01	ci right 8.760756e-01	k: 2224202	n:2540000
KS ci ratio: 1.396225e-01	ci left: 2.885736e-04	ci right 3.322639e-04	k: 787	n:2540000
SOLH   2540000 perm   2832 sec   (897 perm/sec)   p_kst 3.098425e-04   p_cons 8.756701e-01   p_joint 4.519685e-04

Joint ci ratio: 1.152181e-01	ci left: 4.275793e-04	ci right 4.802326e-04	k: 1156	n:2550000
Cons ci ratio: 9.248678e-04	ci left: 8.752917e-01	ci right 8.761020e-01	k: 2233028	n:2550000
KS ci ratio: 1.390939e-01	ci left: 2.897129e-04	ci right 3.333958e-04	k: 793	n:2550000
SOLH   2550000 perm   2852 sec   (894 perm/sec)   p_kst 3.109804e-04   p_cons 8.756973e-01   p_joint 4.533333e-04

Joint ci ratio: 1.149699e-01	ci left: 4.278060e-04	ci right 4.803660e-04	k: 1161	n:2560000
Cons ci ratio: 9.231342e-04	ci left: 8.752749e-01	ci right 8.760836e-01	k: 2241740	n:2560000
KS ci ratio: 1.390065e-01	ci left: 2.889582e-04	ci right 3.324977e-04	k: 794	n:2560000
SOLH   2560000 perm   2871 sec   (892 perm/sec)   p_kst 3.101562e-04   p_cons 8.756797e-01   p_joint 4.535156e-04

Joint ci ratio: 1.145272e-01	ci left: 4.295428e-04	ci right 4.820993e-04	k: 1170	n:2570000
Cons ci ratio: 9.213904e-04	ci left: 8.752629e-01	ci right 8.760701e-01	k: 2250464	n:2570000
KS ci ratio: 1.384848e-01	ci left: 2.900875e-04	ci right 3.336195e-04	k: 800	n:2570000
SOLH   2570000 perm   2891 sec   (889 perm/sec)   p_kst 3.112840e-04   p_cons 8.756669e-01   p_joint 4.552529e-04

Joint ci ratio: 1.142834e-01	ci left: 4.297604e-04	ci right 4.822241e-04	k: 1175	n:2580000
Cons ci ratio: 9.196729e-04	ci left: 8.752471e-01	ci right 8.760528e-01	k: 2259178	n:2580000
KS ci ratio: 1.381403e-01	ci left: 2.904598e-04	ci right 3.339304e-04	k: 804	n:2580000
SOLH   2580000 perm   2911 sec   (886 perm/sec)   p_kst 3.116279e-04   p_cons 8.756504e-01   p_joint 4.554264e-04

Joint ci ratio: 1.142350e-01	ci left: 4.284762e-04	ci right 4.807594e-04	k: 1176	n:2590000
Cons ci ratio: 9.179584e-04	ci left: 8.752330e-01	ci right 8.760372e-01	k: 2267896	n:2590000
KS ci ratio: 1.381403e-01	ci left: 2.893383e-04	ci right 3.326411e-04	k: 804	n:2590000
SOLH   2590000 perm   2930 sec   (884 perm/sec)   p_kst 3.104247e-04   p_cons 8.756355e-01   p_joint 4.540541e-04

Joint ci ratio: 1.138967e-01	ci left: 4.294437e-04	ci right 4.816794e-04	k: 1183	n:2600000
Cons ci ratio: 9.160577e-04	ci left: 8.752656e-01	ci right 8.760682e-01	k: 2276735	n:2600000
KS ci ratio: 1.377984e-01	ci left: 2.897109e-04	ci right 3.329533e-04	k: 808	n:2600000
SOLH   2600000 perm   2950 sec   (881 perm/sec)   p_kst 3.107692e-04   p_cons 8.756673e-01   p_joint 4.550000e-04

Joint ci ratio: 1.137048e-01	ci left: 4.292873e-04	ci right 4.814100e-04	k: 1187	n:2610000
Cons ci ratio: 9.142587e-04	ci left: 8.752765e-01	ci right 8.760775e-01	k: 2285518	n:2610000
KS ci ratio: 1.374590e-01	ci left: 2.900807e-04	ci right 3.332629e-04	k: 812	n:2610000
SOLH   2610000 perm   2970 sec   (879 perm/sec)   p_kst 3.111111e-04   p_cons 8.756774e-01   p_joint 4.547893e-04

Joint ci ratio: 1.134663e-01	ci left: 4.295030e-04	ci right 4.815352e-04	k: 1192	n:2620000
Cons ci ratio: 9.125551e-04	ci left: 8.752670e-01	ci right 8.760665e-01	k: 2294248	n:2620000
KS ci ratio: 1.372061e-01	ci left: 2.900792e-04	ci right 3.331753e-04	k: 815	n:2620000
SOLH   2620000 perm   2990 sec   (876 perm/sec)   p_kst 3.110687e-04   p_cons 8.756672e-01   p_joint 4.549618e-04

Joint ci ratio: 1.134188e-01	ci left: 4.282393e-04	ci right 4.800953e-04	k: 1193	n:2630000
Cons ci ratio: 9.108069e-04	ci left: 8.752706e-01	ci right 8.760685e-01	k: 2303012	n:2630000
KS ci ratio: 1.371221e-01	ci left: 2.893434e-04	ci right 3.323017e-04	k: 816	n:2630000
SOLH   2630000 perm   3011 sec   (873 perm/sec)   p_kst 3.102662e-04   p_cons 8.756700e-01   p_joint 4.536122e-04

Joint ci ratio: 1.132294e-01	ci left: 4.280894e-04	ci right 4.798348e-04	k: 1197	n:2640000
Cons ci ratio: 9.090735e-04	ci left: 8.752730e-01	ci right 8.760694e-01	k: 2311773	n:2640000
KS ci ratio: 1.369546e-01	ci left: 2.889790e-04	ci right 3.318265e-04	k: 818	n:2640000
SOLH   2640000 perm   3031 sec   (871 perm/sec)   p_kst 3.098485e-04   p_cons 8.756716e-01   p_joint 4.534091e-04

Joint ci ratio: 1.130879e-01	ci left: 4.275740e-04	ci right 4.791882e-04	k: 1200	n:2650000
Cons ci ratio: 9.073263e-04	ci left: 8.752810e-01	ci right 8.760759e-01	k: 2320549	n:2650000
KS ci ratio: 1.367045e-01	ci left: 2.889818e-04	ci right 3.317452e-04	k: 821	n:2650000
SOLH   2650000 perm   3051 sec   (869 perm/sec)   p_kst 3.098113e-04   p_cons 8.756789e-01   p_joint 4.528302e-04

Joint ci ratio: 1.126199e-01	ci left: 4.296199e-04	ci right 4.812522e-04	k: 1210	n:2660000
Cons ci ratio: 9.055782e-04	ci left: 8.752916e-01	ci right 8.760850e-01	k: 2329332	n:2660000
KS ci ratio: 1.361260e-01	ci left: 2.904372e-04	ci right 3.332193e-04	k: 828	n:2660000
SOLH   2660000 perm   3071 sec   (866 perm/sec)   p_kst 3.112782e-04   p_cons 8.756887e-01   p_joint 4.548872e-04

Joint ci ratio: 1.122036e-01	ci left: 4.312868e-04	ci right 4.829153e-04	k: 1219	n:2670000
Cons ci ratio: 9.039163e-04	ci left: 8.752838e-01	ci right 8.760757e-01	k: 2338066	n:2670000
KS ci ratio: 1.356360e-01	ci left: 2.915203e-04	ci right 3.342948e-04	k: 834	n:2670000
SOLH   2670000 perm   3092 sec   (864 perm/sec)   p_kst 3.123596e-04   p_cons 8.756801e-01   p_joint 4.565543e-04

Joint ci ratio: 1.120659e-01	ci left: 4.307655e-04	ci right 4.822641e-04	k: 1222	n:2680000
Cons ci ratio: 9.021909e-04	ci left: 8.752936e-01	ci right 8.760840e-01	k: 2346847	n:2680000
KS ci ratio: 1.353930e-01	ci left: 2.915139e-04	ci right 3.342048e-04	k: 837	n:2680000
SOLH   2680000 perm   3114 sec   (861 perm/sec)   p_kst 3.123134e-04   p_cons 8.756892e-01   p_joint 4.559701e-04

Joint ci ratio: 1.118376e-01	ci left: 4.309709e-04	ci right 4.823821e-04	k: 1227	n:2690000
Cons ci ratio: 9.004861e-04	ci left: 8.753007e-01	ci right 8.760896e-01	k: 2355621	n:2690000
KS ci ratio: 1.351513e-01	ci left: 2.915077e-04	ci right 3.341153e-04	k: 840	n:2690000
SOLH   2690000 perm   3134 sec   (858 perm/sec)   p_kst 3.122677e-04   p_cons 8.756955e-01   p_joint 4.561338e-04

Joint ci ratio: 1.117012e-01	ci left: 4.304547e-04	ci right 4.817377e-04	k: 1230	n:2700000
Cons ci ratio: 8.988047e-04	ci left: 8.753044e-01	ci right 8.760918e-01	k: 2364386	n:2700000
KS ci ratio: 1.350710e-01	ci left: 2.907859e-04	ci right 3.332608e-04	k: 841	n:2700000
SOLH   2700000 perm   3154 sec   (856 perm/sec)   p_kst 3.114815e-04   p_cons 8.756985e-01   p_joint 4.555556e-04

Joint ci ratio: 1.115202e-01	ci left: 4.303011e-04	ci right 4.814772e-04	k: 1234	n:2710000
Cons ci ratio: 8.972072e-04	ci left: 8.752900e-01	ci right 8.760760e-01	k: 2373102	n:2710000
KS ci ratio: 1.348310e-01	ci left: 2.907826e-04	ci right 3.331754e-04	k: 844	n:2710000
SOLH   2710000 perm   3175 sec   (854 perm/sec)   p_kst 3.114391e-04   p_cons 8.756834e-01   p_joint 4.553506e-04

Joint ci ratio: 1.111607e-01	ci left: 4.315784e-04	ci right 4.827301e-04	k: 1242	n:2720000
Cons ci ratio: 8.955894e-04	ci left: 8.752827e-01	ci right 8.760673e-01	k: 2381837	n:2720000
KS ci ratio: 1.344339e-01	ci left: 2.914898e-04	ci right 3.338506e-04	k: 849	n:2720000
SOLH   2720000 perm   3195 sec   (851 perm/sec)   p_kst 3.121324e-04   p_cons 8.756754e-01   p_joint 4.566176e-04

Joint ci ratio: 1.110268e-01	ci left: 4.310659e-04	ci right 4.820913e-04	k: 1245	n:2730000
Cons ci ratio: 8.939277e-04	ci left: 8.752882e-01	ci right 8.760714e-01	k: 2390607	n:2730000
KS ci ratio: 1.343549e-01	ci left: 2.907761e-04	ci right 3.330063e-04	k: 850	n:2730000
SOLH   2730000 perm   3216 sec   (849 perm/sec)   p_kst 3.113553e-04   p_cons 8.756802e-01   p_joint 4.560440e-04

Joint ci ratio: 1.104958e-01	ci left: 4.337510e-04	ci right 4.848327e-04	k: 1257	n:2740000
Cons ci ratio: 8.923261e-04	ci left: 8.752814e-01	ci right 8.760631e-01	k: 2399343	n:2740000
KS ci ratio: 1.335722e-01	ci left: 2.932422e-04	ci right 3.355628e-04	k: 860	n:2740000
SOLH   2740000 perm   3237 sec   (847 perm/sec)   p_kst 3.138686e-04   p_cons 8.756726e-01   p_joint 4.587591e-04

Joint ci ratio: 1.104520e-01	ci left: 4.325273e-04	ci right 4.834433e-04	k: 1258	n:2750000
Cons ci ratio: 8.906661e-04	ci left: 8.752909e-01	ci right 8.760712e-01	k: 2408124	n:2750000
KS ci ratio: 1.334948e-01	ci left: 2.925274e-04	ci right 3.347184e-04	k: 861	n:2750000
SOLH   2750000 perm   3258 sec   (844 perm/sec)   p_kst 3.130909e-04   p_cons 8.756815e-01   p_joint 4.574545e-04

Joint ci ratio: 1.103645e-01	ci left: 4.316648e-04	ci right 4.824364e-04	k: 1260	n:2760000
Cons ci ratio: 8.890049e-04	ci left: 8.753029e-01	ci right 8.760818e-01	k: 2416912	n:2760000
KS ci ratio: 1.334175e-01	ci left: 2.918177e-04	ci right 3.338800e-04	k: 862	n:2760000
SOLH   2760000 perm   3281 sec   (841 perm/sec)   p_kst 3.123188e-04   p_cons 8.756928e-01   p_joint 4.565217e-04

Joint ci ratio: 1.101463e-01	ci left: 4.318617e-04	ci right 4.825495e-04	k: 1265	n:2770000
Cons ci ratio: 8.874590e-04	ci left: 8.752888e-01	ci right 8.760663e-01	k: 2425628	n:2770000
KS ci ratio: 1.331093e-01	ci left: 2.921601e-04	ci right 3.341668e-04	k: 866	n:2770000
SOLH   2770000 perm   3302 sec   (839 perm/sec)   p_kst 3.126354e-04   p_cons 8.756780e-01   p_joint 4.566787e-04

Joint ci ratio: 1.098430e-01	ci left: 4.327569e-04	ci right 4.834010e-04	k: 1272	n:2780000
Cons ci ratio: 8.858904e-04	ci left: 8.752824e-01	ci right 8.760585e-01	k: 2434365	n:2780000
KS ci ratio: 1.327271e-01	ci left: 2.928479e-04	ci right 3.348231e-04	k: 871	n:2780000
SOLH   2780000 perm   3322 sec   (837 perm/sec)   p_kst 3.133094e-04   p_cons 8.756709e-01   p_joint 4.575540e-04

Joint ci ratio: 1.095850e-01	ci left: 4.332974e-04	ci right 4.838779e-04	k: 1278	n:2790000
Cons ci ratio: 8.843504e-04	ci left: 8.752710e-01	ci right 8.760458e-01	k: 2443088	n:2790000
KS ci ratio: 1.324237e-01	ci left: 2.931844e-04	ci right 3.351042e-04	k: 875	n:2790000
SOLH   2790000 perm   3343 sec   (834 perm/sec)   p_kst 3.136201e-04   p_cons 8.756588e-01   p_joint 4.580645e-04

Joint ci ratio: 1.094141e-01	ci left: 4.331393e-04	ci right 4.836174e-04	k: 1282	n:2800000
Cons ci ratio: 8.827315e-04	ci left: 8.752812e-01	ci right 8.760545e-01	k: 2451871	n:2800000
KS ci ratio: 1.321975e-01	ci left: 2.931733e-04	ci right 3.350143e-04	k: 878	n:2800000
SOLH   2800000 perm   3365 sec   (832 perm/sec)   p_kst 3.135714e-04   p_cons 8.756682e-01   p_joint 4.578571e-04

Joint ci ratio: 1.093289e-01	ci left: 4.322902e-04	ci right 4.826276e-04	k: 1284	n:2810000
Cons ci ratio: 8.812310e-04	ci left: 8.752642e-01	ci right 8.760361e-01	k: 2460578	n:2810000
KS ci ratio: 1.321225e-01	ci left: 2.924741e-04	ci right 3.341897e-04	k: 879	n:2810000
SOLH   2810000 perm   3386 sec   (830 perm/sec)   p_kst 3.128114e-04   p_cons 8.756505e-01   p_joint 4.569395e-04

Joint ci ratio: 1.091592e-01	ci left: 4.321369e-04	ci right 4.823733e-04	k: 1288	n:2820000
Cons ci ratio: 8.796564e-04	ci left: 8.752675e-01	ci right 8.760381e-01	k: 2469342	n:2820000
KS ci ratio: 1.319726e-01	ci left: 2.921227e-04	ci right 3.337373e-04	k: 881	n:2820000
SOLH   2820000 perm   3414 sec   (826 perm/sec)   p_kst 3.124113e-04   p_cons 8.756532e-01   p_joint 4.567376e-04

Joint ci ratio: 1.091169e-01	ci left: 4.309536e-04	ci right 4.810318e-04	k: 1289	n:2830000
Cons ci ratio: 8.780631e-04	ci left: 8.752775e-01	ci right 8.760468e-01	k: 2478125	n:2830000
KS ci ratio: 1.318979e-01	ci left: 2.914322e-04	ci right 3.329230e-04	k: 882	n:2830000
SOLH   2830000 perm   3439 sec   (823 perm/sec)   p_kst 3.116608e-04   p_cons 8.756625e-01   p_joint 4.554770e-04

Joint ci ratio: 1.088220e-01	ci left: 4.318338e-04	ci right 4.818700e-04	k: 1296	n:2840000
Cons ci ratio: 8.765480e-04	ci left: 8.752702e-01	ci right 8.760381e-01	k: 2486859	n:2840000
KS ci ratio: 1.315260e-01	ci left: 2.921086e-04	ci right 3.335693e-04	k: 887	n:2840000
SOLH   2840000 perm   3473 sec   (818 perm/sec)   p_kst 3.123239e-04   p_cons 8.756546e-01   p_joint 4.563380e-04

Joint ci ratio: 1.085295e-01	ci left: 4.327080e-04	ci right 4.827021e-04	k: 1303	n:2850000
Cons ci ratio: 8.749870e-04	ci left: 8.752764e-01	ci right 8.760429e-01	k: 2495631	n:2850000
KS ci ratio: 1.310106e-01	ci left: 2.934591e-04	ci right 3.349356e-04	k: 894	n:2850000
SOLH   2850000 perm   3494 sec   (816 perm/sec)   p_kst 3.136842e-04   p_cons 8.756600e-01   p_joint 4.571930e-04

Joint ci ratio: 1.083220e-01	ci left: 4.328959e-04	ci right 4.828100e-04	k: 1308	n:2860000
Cons ci ratio: 8.735003e-04	ci left: 8.752660e-01	ci right 8.760312e-01	k: 2504356	n:2860000
KS ci ratio: 1.307187e-01	ci left: 2.937859e-04	ci right 3.352089e-04	k: 898	n:2860000
SOLH   2860000 perm   3516 sec   (813 perm/sec)   p_kst 3.139860e-04   p_cons 8.756490e-01   p_joint 4.573427e-04

Joint ci ratio: 1.082394e-01	ci left: 4.320655e-04	ci right 4.818434e-04	k: 1310	n:2870000
Cons ci ratio: 8.718565e-04	ci left: 8.752968e-01	ci right 8.760606e-01	k: 2513199	n:2870000
KS ci ratio: 1.307188e-01	ci left: 2.927622e-04	ci right 3.340409e-04	k: 898	n:2870000
SOLH   2870000 perm   3541 sec   (811 perm/sec)   p_kst 3.128920e-04   p_cons 8.756791e-01   p_joint 4.564460e-04

Joint ci ratio: 1.081982e-01	ci left: 4.309031e-04	ci right 4.805270e-04	k: 1311	n:2880000
Cons ci ratio: 8.703371e-04	ci left: 8.752986e-01	ci right 8.760611e-01	k: 2521959	n:2880000
KS ci ratio: 1.306462e-01	ci left: 2.920816e-04	ci right 3.332396e-04	k: 899	n:2880000
SOLH   2880000 perm   3563 sec   (808 perm/sec)   p_kst 3.121528e-04   p_cons 8.756802e-01   p_joint 4.552083e-04

Joint ci ratio: 1.078698e-01	ci left: 4.321054e-04	ci right 4.817072e-04	k: 1319	n:2890000
Cons ci ratio: 8.689015e-04	ci left: 8.752813e-01	ci right 8.760425e-01	k: 2530664	n:2890000
KS ci ratio: 1.301410e-01	ci left: 2.934140e-04	ci right 3.345876e-04	k: 906	n:2890000
SOLH   2890000 perm   3585 sec   (806 perm/sec)   p_kst 3.134948e-04   p_cons 8.756623e-01   p_joint 4.564014e-04

Joint ci ratio: 1.077067e-01	ci left: 4.319576e-04	ci right 4.814626e-04	k: 1323	n:2900000
Cons ci ratio: 8.674057e-04	ci left: 8.752811e-01	ci right 8.760409e-01	k: 2539418	n:2900000
KS ci ratio: 1.299978e-01	ci left: 2.930695e-04	ci right 3.341460e-04	k: 908	n:2900000
SOLH   2900000 perm   3607 sec   (804 perm/sec)   p_kst 3.131034e-04   p_cons 8.756614e-01   p_joint 4.562069e-04

Joint ci ratio: 1.076255e-01	ci left: 4.311419e-04	ci right 4.805139e-04	k: 1325	n:2910000
Cons ci ratio: 8.658479e-04	ci left: 8.752984e-01	ci right 8.760569e-01	k: 2548223	n:2910000
KS ci ratio: 1.298550e-01	ci left: 2.927273e-04	ci right 3.337073e-04	k: 910	n:2910000
SOLH   2910000 perm   3629 sec   (802 perm/sec)   p_kst 3.127148e-04   p_cons 8.756780e-01   p_joint 4.553265e-04

Joint ci ratio: 1.073828e-01	ci left: 4.316650e-04	ci right 4.809783e-04	k: 1331	n:2920000
Cons ci ratio: 8.642727e-04	ci left: 8.753221e-01	ci right 8.760792e-01	k: 2557047	n:2920000
KS ci ratio: 1.294295e-01	ci left: 2.937130e-04	ci right 3.346859e-04	k: 916	n:2920000
SOLH   2920000 perm   3652 sec   (800 perm/sec)   p_kst 3.136986e-04   p_cons 8.757010e-01   p_joint 4.558219e-04

Joint ci ratio: 1.073023e-01	ci left: 4.308560e-04	ci right 4.800377e-04	k: 1333	n:2930000
Cons ci ratio: 8.628168e-04	ci left: 8.753176e-01	ci right 8.760735e-01	k: 2565789	n:2930000
KS ci ratio: 1.293590e-01	ci left: 2.930408e-04	ci right 3.338960e-04	k: 917	n:2930000
SOLH   2930000 perm   3674 sec   (798 perm/sec)   p_kst 3.129693e-04   p_cons 8.756959e-01   p_joint 4.549488e-04

Joint ci ratio: 1.069421e-01	ci left: 4.323697e-04	ci right 4.815481e-04	k: 1342	n:2940000
Cons ci ratio: 8.613616e-04	ci left: 8.753148e-01	ci right 8.760695e-01	k: 2574536	n:2940000
KS ci ratio: 1.291481e-01	ci left: 2.930315e-04	ci right 3.338136e-04	k: 920	n:2940000
SOLH   2940000 perm   3696 sec   (795 perm/sec)   p_kst 3.129252e-04   p_cons 8.756925e-01   p_joint 4.564626e-04

Joint ci ratio: 1.068626e-01	ci left: 4.315639e-04	ci right 4.806118e-04	k: 1344	n:2950000
Cons ci ratio: 8.599191e-04	ci left: 8.753108e-01	ci right 8.760641e-01	k: 2583279	n:2950000
KS ci ratio: 1.290781e-01	ci left: 2.923662e-04	ci right 3.330320e-04	k: 921	n:2950000
SOLH   2950000 perm   3718 sec   (793 perm/sec)   p_kst 3.122034e-04   p_cons 8.756878e-01   p_joint 4.555932e-04

Joint ci ratio: 1.066645e-01	ci left: 4.317500e-04	ci right 4.807224e-04	k: 1349	n:2960000
Cons ci ratio: 8.585024e-04	ci left: 8.753020e-01	ci right 8.760541e-01	k: 2592008	n:2960000
KS ci ratio: 1.287990e-01	ci left: 2.926862e-04	ci right 3.333018e-04	k: 925	n:2960000
SOLH   2960000 perm   3740 sec   (791 perm/sec)   p_kst 3.125000e-04   p_cons 8.756784e-01   p_joint 4.557432e-04

Joint ci ratio: 1.064675e-01	ci left: 4.319349e-04	ci right 4.808322e-04	k: 1354	n:2970000
Cons ci ratio: 8.570185e-04	ci left: 8.753121e-01	ci right 8.760629e-01	k: 2600793	n:2970000
KS ci ratio: 1.284527e-01	ci left: 2.933301e-04	ci right 3.339172e-04	k: 930	n:2970000
SOLH   2970000 perm   3762 sec   (789 perm/sec)   p_kst 3.131313e-04   p_cons 8.756879e-01   p_joint 4.558923e-04

Joint ci ratio: 1.063108e-01	ci left: 4.317920e-04	ci right 4.805966e-04	k: 1358	n:2980000
Cons ci ratio: 8.555647e-04	ci left: 8.753165e-01	ci right 8.760660e-01	k: 2609561	n:2980000
KS ci ratio: 1.282462e-01	ci left: 2.933201e-04	ci right 3.338357e-04	k: 933	n:2980000
SOLH   2980000 perm   3785 sec   (787 perm/sec)   p_kst 3.130872e-04   p_cons 8.756916e-01   p_joint 4.557047e-04

Joint ci ratio: 1.061547e-01	ci left: 4.316501e-04	ci right 4.803626e-04	k: 1362	n:2990000
Cons ci ratio: 8.541090e-04	ci left: 8.753232e-01	ci right 8.760714e-01	k: 2618336	n:2990000
KS ci ratio: 1.281091e-01	ci left: 2.929866e-04	ci right 3.334095e-04	k: 935	n:2990000
SOLH   2990000 perm   3807 sec   (785 perm/sec)   p_kst 3.127090e-04   p_cons 8.756977e-01   p_joint 4.555184e-04

Joint ci ratio: 1.059605e-01	ci left: 4.318338e-04	ci right 4.804722e-04	k: 1367	n:3000000
Cons ci ratio: 8.526282e-04	ci left: 8.753381e-01	ci right 8.760851e-01	k: 2627136	n:3000000
KS ci ratio: 1.278362e-01	ci left: 2.933006e-04	ci right 3.336742e-04	k: 939	n:3000000
SOLH   3000000 perm   3830 sec   (783 perm/sec)   p_kst 3.130000e-04   p_cons 8.757120e-01   p_joint 4.556667e-04

Joint ci ratio: 1.058445e-01	ci left: 4.313694e-04	ci right 4.798991e-04	k: 1370	n:3010000
Cons ci ratio: 8.511770e-04	ci left: 8.753474e-01	ci right 8.760931e-01	k: 2635919	n:3010000
KS ci ratio: 1.276327e-01	ci left: 2.932910e-04	ci right 3.335941e-04	k: 942	n:3010000
SOLH   3010000 perm   3853 sec   (781 perm/sec)   p_kst 3.129568e-04   p_cons 8.757206e-01   p_joint 4.551495e-04

Joint ci ratio: 1.057289e-01	ci left: 4.309081e-04	ci right 4.793297e-04	k: 1373	n:3020000
Cons ci ratio: 8.498044e-04	ci left: 8.753383e-01	ci right 8.760828e-01	k: 2644647	n:3020000
KS ci ratio: 1.274976e-01	ci left: 2.929610e-04	ci right 3.331729e-04	k: 944	n:3020000
SOLH   3020000 perm   3876 sec   (779 perm/sec)   p_kst 3.125828e-04   p_cons 8.757109e-01   p_joint 4.546358e-04

Joint ci ratio: 1.055371e-01	ci left: 4.310925e-04	ci right 4.794415e-04	k: 1378	n:3030000
Cons ci ratio: 8.484255e-04	ci left: 8.753326e-01	ci right 8.760759e-01	k: 2653385	n:3030000
KS ci ratio: 1.272957e-01	ci left: 2.929527e-04	ci right 3.330949e-04	k: 947	n:3030000
SOLH   3030000 perm   3898 sec   (777 perm/sec)   p_kst 3.125413e-04   p_cons 8.757046e-01   p_joint 4.547855e-04

Joint ci ratio: 1.052702e-01	ci left: 4.319164e-04	ci right 4.802276e-04	k: 1385	n:3040000
Cons ci ratio: 8.469867e-04	ci left: 8.753441e-01	ci right 8.760861e-01	k: 2662175	n:3040000
KS ci ratio: 1.268283e-01	ci left: 2.942184e-04	ci right 3.343750e-04	k: 954	n:3040000
SOLH   3040000 perm   3922 sec   (775 perm/sec)   p_kst 3.138158e-04   p_cons 8.757155e-01   p_joint 4.555921e-04

Joint ci ratio: 1.051565e-01	ci left: 4.314580e-04	ci right 4.796626e-04	k: 1388	n:3050000
Cons ci ratio: 8.456724e-04	ci left: 8.753253e-01	ci right 8.760661e-01	k: 2670873	n:3050000
KS ci ratio: 1.266295e-01	ci left: 2.942062e-04	ci right 3.342935e-04	k: 957	n:3050000
SOLH   3050000 perm   3944 sec   (773 perm/sec)   p_kst 3.137705e-04   p_cons 8.756961e-01   p_joint 4.550820e-04

Joint ci ratio: 1.047799e-01	ci left: 4.332302e-04	ci right 4.814488e-04	k: 1398	n:3060000
Cons ci ratio: 8.442780e-04	ci left: 8.753288e-01	ci right 8.760685e-01	k: 2679639	n:3060000
KS ci ratio: 1.261040e-01	ci left: 2.957765e-04	ci right 3.358980e-04	k: 965	n:3060000
SOLH   3060000 perm   3967 sec   (771 perm/sec)   p_kst 3.153595e-04   p_cons 8.756990e-01   p_joint 4.568627e-04

Joint ci ratio: 1.045931e-01	ci left: 4.334051e-04	ci right 4.815519e-04	k: 1403	n:3070000
Cons ci ratio: 8.429636e-04	ci left: 8.753135e-01	ci right 8.760519e-01	k: 2688347	n:3070000
KS ci ratio: 1.259737e-01	ci left: 2.954440e-04	ci right 3.354758e-04	k: 967	n:3070000
SOLH   3070000 perm   3990 sec   (769 perm/sec)   p_kst 3.149837e-04   p_cons 8.756831e-01   p_joint 4.570033e-04

Joint ci ratio: 1.043333e-01	ci left: 4.342113e-04	ci right 4.823204e-04	k: 1410	n:3080000
Cons ci ratio: 8.415750e-04	ci left: 8.753190e-01	ci right 8.760563e-01	k: 2697119	n:3080000
KS ci ratio: 1.255206e-01	ci left: 2.966860e-04	ci right 3.367308e-04	k: 974	n:3080000
SOLH   3080000 perm   4013 sec   (767 perm/sec)   p_kst 3.162338e-04   p_cons 8.756880e-01   p_joint 4.577922e-04

Joint ci ratio: 1.041857e-01	ci left: 4.340668e-04	ci right 4.820878e-04	k: 1414	n:3090000
Cons ci ratio: 8.402445e-04	ci left: 8.753112e-01	ci right 8.760473e-01	k: 2705850	n:3090000
KS ci ratio: 1.253921e-01	ci left: 2.963528e-04	ci right 3.363086e-04	k: 976	n:3090000
SOLH   3090000 perm   4036 sec   (766 perm/sec)   p_kst 3.158576e-04   p_cons 8.756796e-01   p_joint 4.576052e-04

Joint ci ratio: 1.040022e-01	ci left: 4.342375e-04	ci right 4.821875e-04	k: 1419	n:3100000
Cons ci ratio: 8.388991e-04	ci left: 8.753090e-01	ci right 8.760439e-01	k: 2714598	n:3100000
KS ci ratio: 1.252000e-01	ci left: 2.963342e-04	ci right 3.362218e-04	k: 979	n:3100000
SOLH   3100000 perm   4059 sec   (764 perm/sec)   p_kst 3.158065e-04   p_cons 8.756768e-01   p_joint 4.577419e-04

Joint ci ratio: 1.038560e-01	ci left: 4.340940e-04	ci right 4.819567e-04	k: 1423	n:3110000
Cons ci ratio: 8.375799e-04	ci left: 8.753016e-01	ci right 8.760353e-01	k: 2723330	n:3110000
KS ci ratio: 1.250088e-01	ci left: 2.963158e-04	ci right 3.361355e-04	k: 982	n:3110000
SOLH   3110000 perm   4083 sec   (762 perm/sec)   p_kst 3.157556e-04   p_cons 8.756688e-01   p_joint 4.575563e-04

Joint ci ratio: 1.037104e-01	ci left: 4.339514e-04	ci right 4.817273e-04	k: 1427	n:3120000
Cons ci ratio: 8.362423e-04	ci left: 8.753007e-01	ci right 8.760332e-01	k: 2732082	n:3120000
KS ci ratio: 1.248818e-01	ci left: 2.959871e-04	ci right 3.357192e-04	k: 984	n:3120000
SOLH   3120000 perm   4106 sec   (760 perm/sec)   p_kst 3.153846e-04   p_cons 8.756673e-01   p_joint 4.573718e-04

Joint ci ratio: 1.033851e-01	ci left: 4.353659e-04	ci right 4.831380e-04	k: 1436	n:3130000
Cons ci ratio: 8.349711e-04	ci left: 8.752841e-01	ci right 8.760155e-01	k: 2740785	n:3130000
KS ci ratio: 1.243777e-01	ci left: 2.975177e-04	ci right 3.372821e-04	k: 992	n:3130000
SOLH   3130000 perm   4130 sec   (758 perm/sec)   p_kst 3.169329e-04   p_cons 8.756502e-01   p_joint 4.587859e-04

Joint ci ratio: 1.030271e-01	ci left: 4.370819e-04	ci right 4.848662e-04	k: 1446	n:3140000
Cons ci ratio: 8.336277e-04	ci left: 8.752880e-01	ci right 8.760183e-01	k: 2749552	n:3140000
KS ci ratio: 1.238177e-01	ci left: 2.993475e-04	ci right 3.391631e-04	k: 1001	n:3140000
SOLH   3140000 perm   4154 sec   (756 perm/sec)   p_kst 3.187898e-04   p_cons 8.756535e-01   p_joint 4.605096e-04

Joint ci ratio: 1.029561e-01	ci left: 4.363129e-04	ci right 4.839783e-04	k: 1448	n:3150000
Cons ci ratio: 8.322289e-04	ci left: 8.753081e-01	ci right 8.760372e-01	k: 2758370	n:3150000
KS ci ratio: 1.237560e-01	ci left: 2.987048e-04	ci right 3.384137e-04	k: 1002	n:3150000
SOLH   3150000 perm   4178 sec   (754 perm/sec)   p_kst 3.180952e-04   p_cons 8.756730e-01   p_joint 4.596825e-04

Joint ci ratio: 1.028851e-01	ci left: 4.355488e-04	ci right 4.830959e-04	k: 1450	n:3160000
Cons ci ratio: 8.309022e-04	ci left: 8.753110e-01	ci right 8.760389e-01	k: 2767134	n:3160000
KS ci ratio: 1.237561e-01	ci left: 2.977595e-04	ci right 3.373428e-04	k: 1002	n:3160000
SOLH   3160000 perm   4202 sec   (752 perm/sec)   p_kst 3.170886e-04   p_cons 8.756753e-01   p_joint 4.588608e-04

Joint ci ratio: 1.027083e-01	ci left: 4.357116e-04	ci right 4.831898e-04	k: 1455	n:3170000
Cons ci ratio: 8.296480e-04	ci left: 8.752965e-01	ci right 8.760233e-01	k: 2775843	n:3170000
KS ci ratio: 1.235714e-01	ci left: 2.977373e-04	ci right 3.372543e-04	k: 1005	n:3170000
SOLH   3170000 perm   4226 sec   (750 perm/sec)   p_kst 3.170347e-04   p_cons 8.756603e-01   p_joint 4.589905e-04

Joint ci ratio: 1.026027e-01	ci left: 4.352606e-04	ci right 4.826379e-04	k: 1458	n:3180000
Cons ci ratio: 8.283325e-04	ci left: 8.752997e-01	ci right 8.760254e-01	k: 2784608	n:3180000
KS ci ratio: 1.235101e-01	ci left: 2.971058e-04	ci right 3.365179e-04	k: 1006	n:3180000
SOLH   3180000 perm   4250 sec   (748 perm/sec)   p_kst 3.163522e-04   p_cons 8.756629e-01   p_joint 4.584906e-04

Joint ci ratio: 1.024974e-01	ci left: 4.348124e-04	ci right 4.820895e-04	k: 1461	n:3190000
Cons ci ratio: 8.270362e-04	ci left: 8.752995e-01	ci right 8.760240e-01	k: 2793362	n:3190000
KS ci ratio: 1.233877e-01	ci left: 2.967820e-04	ci right 3.361093e-04	k: 1008	n:3190000
SOLH   3190000 perm   4275 sec   (746 perm/sec)   p_kst 3.159875e-04   p_cons 8.756621e-01   p_joint 4.579937e-04

Joint ci ratio: 1.023226e-01	ci left: 4.349761e-04	ci right 4.821855e-04	k: 1466	n:3200000
Cons ci ratio: 8.257532e-04	ci left: 8.752973e-01	ci right 8.760207e-01	k: 2802110	n:3200000
KS ci ratio: 1.232046e-01	ci left: 2.967631e-04	ci right 3.360254e-04	k: 1011	n:3200000
SOLH   3200000 perm   4299 sec   (744 perm/sec)   p_kst 3.159375e-04   p_cons 8.756594e-01   p_joint 4.581250e-04

Joint ci ratio: 1.022878e-01	ci left: 4.339246e-04	ci right 4.810028e-04	k: 1467	n:3210000
Cons ci ratio: 8.244714e-04	ci left: 8.752965e-01	ci right 8.760187e-01	k: 2810862	n:3210000
KS ci ratio: 1.232047e-01	ci left: 2.958386e-04	ci right 3.349786e-04	k: 1011	n:3210000
SOLH   3210000 perm   4323 sec   (742 perm/sec)   p_kst 3.149533e-04   p_cons 8.756579e-01   p_joint 4.570093e-04

Joint ci ratio: 1.020793e-01	ci left: 4.343928e-04	ci right 4.814200e-04	k: 1473	n:3220000
Cons ci ratio: 8.232178e-04	ci left: 8.752897e-01	ci right 8.760109e-01	k: 2819595	n:3220000
KS ci ratio: 1.228410e-01	ci left: 2.967259e-04	ci right 3.358589e-04	k: 1017	n:3220000
SOLH   3220000 perm   4348 sec   (741 perm/sec)   p_kst 3.158385e-04   p_cons 8.756506e-01   p_joint 4.574534e-04

Joint ci ratio: 1.019066e-01	ci left: 4.345564e-04	ci right 4.815170e-04	k: 1478	n:3230000
Cons ci ratio: 8.219501e-04	ci left: 8.752883e-01	ci right 8.760083e-01	k: 2828345	n:3230000
KS ci ratio: 1.226604e-01	ci left: 2.967075e-04	ci right 3.357764e-04	k: 1020	n:3230000
SOLH   3230000 perm   4373 sec   (739 perm/sec)   p_kst 3.157895e-04   p_cons 8.756486e-01   p_joint 4.575851e-04

Joint ci ratio: 1.018378e-01	ci left: 4.338167e-04	ci right 4.806638e-04	k: 1480	n:3240000
Cons ci ratio: 8.206871e-04	ci left: 8.752871e-01	ci right 8.760060e-01	k: 2837096	n:3240000
KS ci ratio: 1.225405e-01	ci left: 2.963901e-04	ci right 3.353763e-04	k: 1022	n:3240000
SOLH   3240000 perm   4397 sec   (737 perm/sec)   p_kst 3.154321e-04   p_cons 8.756469e-01   p_joint 4.567901e-04

Joint ci ratio: 1.017349e-01	ci left: 4.333815e-04	ci right 4.801314e-04	k: 1483	n:3250000
Cons ci ratio: 8.194090e-04	ci left: 8.752915e-01	ci right 8.760093e-01	k: 2845865	n:3250000
KS ci ratio: 1.223612e-01	ci left: 2.963729e-04	ci right 3.352957e-04	k: 1025	n:3250000
SOLH   3250000 perm   4422 sec   (735 perm/sec)   p_kst 3.153846e-04   p_cons 8.756508e-01   p_joint 4.563077e-04

Joint ci ratio: 1.014277e-01	ci left: 4.347427e-04	ci right 4.814895e-04	k: 1492	n:3260000
Cons ci ratio: 8.181357e-04	ci left: 8.752962e-01	ci right 8.760129e-01	k: 2854635	n:3260000
KS ci ratio: 1.218868e-01	ci left: 2.978428e-04	ci right 3.367961e-04	k: 1033	n:3260000
SOLH   3260000 perm   4446 sec   (733 perm/sec)   p_kst 3.168712e-04   p_cons 8.756549e-01   p_joint 4.576687e-04

Joint ci ratio: 1.013260e-01	ci left: 4.343074e-04	ci right 4.809577e-04	k: 1495	n:3270000
Cons ci ratio: 8.169338e-04	ci left: 8.752834e-01	ci right 8.759991e-01	k: 2863348	n:3270000
KS ci ratio: 1.217104e-01	ci left: 2.978215e-04	ci right 3.367115e-04	k: 1036	n:3270000
SOLH   3270000 perm   4470 sec   (731 perm/sec)   p_kst 3.168196e-04   p_cons 8.756416e-01   p_joint 4.571865e-04

Joint ci ratio: 1.010897e-01	ci left: 4.350634e-04	ci right 4.816795e-04	k: 1502	n:3280000
Cons ci ratio: 8.157233e-04	ci left: 8.752744e-01	ci right 8.759890e-01	k: 2872073	n:3280000
KS ci ratio: 1.213598e-01	ci left: 2.986872e-04	ci right 3.375698e-04	k: 1042	n:3280000
SOLH   3280000 perm   4495 sec   (730 perm/sec)   p_kst 3.176829e-04   p_cons 8.756320e-01   p_joint 4.579268e-04

Joint ci ratio: 1.010226e-01	ci left: 4.343336e-04	ci right 4.808387e-04	k: 1504	n:3290000
Cons ci ratio: 8.144672e-04	ci left: 8.752791e-01	ci right 8.759926e-01	k: 2880843	n:3290000
KS ci ratio: 1.212436e-01	ci left: 2.983688e-04	ci right 3.371700e-04	k: 1044	n:3290000
SOLH   3290000 perm   4520 sec   (728 perm/sec)   p_kst 3.173252e-04   p_cons 8.756362e-01   p_joint 4.571429e-04

Joint ci ratio: 1.009221e-01	ci left: 4.339035e-04	ci right 4.803137e-04	k: 1507	n:3300000
Cons ci ratio: 8.132744e-04	ci left: 8.752683e-01	ci right 8.759807e-01	k: 2889562	n:3300000
KS ci ratio: 1.211857e-01	ci left: 2.977584e-04	ci right 3.364605e-04	k: 1045	n:3300000
SOLH   3300000 perm   4545 sec   (726 perm/sec)   p_kst 3.166667e-04   p_cons 8.756248e-01   p_joint 4.566667e-04

Joint ci ratio: 1.007219e-01	ci left: 4.343596e-04	ci right 4.807210e-04	k: 1513	n:3310000
Cons ci ratio: 8.120273e-04	ci left: 8.752736e-01	ci right 8.759849e-01	k: 2898334	n:3310000
KS ci ratio: 1.208396e-01	ci left: 2.986167e-04	ci right 3.373116e-04	k: 1051	n:3310000
SOLH   3310000 perm   4569 sec   (724 perm/sec)   p_kst 3.175227e-04   p_cons 8.756296e-01   p_joint 4.570997e-04

Joint ci ratio: 1.006222e-01	ci left: 4.339322e-04	ci right 4.801994e-04	k: 1516	n:3320000
Cons ci ratio: 8.108396e-04	ci left: 8.752644e-01	ci right 8.759747e-01	k: 2907058	n:3320000
KS ci ratio: 1.206676e-01	ci left: 2.985936e-04	ci right 3.372265e-04	k: 1054	n:3320000
SOLH   3320000 perm   4594 sec   (723 perm/sec)   p_kst 3.174699e-04   p_cons 8.756199e-01   p_joint 4.566265e-04

Joint ci ratio: 1.003908e-01	ci left: 4.346783e-04	ci right 4.809122e-04	k: 1523	n:3330000
Cons ci ratio: 8.096650e-04	ci left: 8.752532e-01	ci right 8.759624e-01	k: 2915775	n:3330000
KS ci ratio: 1.204395e-01	ci left: 2.988619e-04	ci right 3.374512e-04	k: 1058	n:3330000
SOLH   3330000 perm   4619 sec   (721 perm/sec)   p_kst 3.177177e-04   p_cons 8.756081e-01   p_joint 4.573574e-04

Joint ci ratio: 1.001938e-01	ci left: 4.351283e-04	ci right 4.813138e-04	k: 1529	n:3340000
Cons ci ratio: 8.085054e-04	ci left: 8.752393e-01	ci right 8.759475e-01	k: 2924483	n:3340000
KS ci ratio: 1.202127e-01	ci left: 2.991286e-04	ci right 3.376745e-04	k: 1062	n:3340000
SOLH   3340000 perm   4644 sec   (719 perm/sec)   p_kst 3.179641e-04   p_cons 8.755937e-01   p_joint 4.577844e-04

Joint ci ratio: 1.000631e-01	ci left: 4.349935e-04	ci right 4.811010e-04	k: 1533	n:3350000
Cons ci ratio: 8.072645e-04	ci left: 8.752488e-01	ci right 8.759559e-01	k: 2933269	n:3350000
KS ci ratio: 1.200998e-01	ci left: 2.988148e-04	ci right 3.372814e-04	k: 1064	n:3350000
SOLH   3350000 perm   4669 sec   (718 perm/sec)   p_kst 3.176119e-04   p_cons 8.756027e-01   p_joint 4.576119e-04

Joint ci ratio: 9.990040e-02	ci left: 4.351498e-04	ci right 4.811944e-04	k: 1538	n:3360000
Cons ci ratio: 8.059930e-04	ci left: 8.752681e-01	ci right 8.759741e-01	k: 2942088	n:3360000
KS ci ratio: 1.199872e-01	ci left: 2.985028e-04	ci right 3.368907e-04	k: 1066	n:3360000
SOLH   3360000 perm   4694 sec   (716 perm/sec)   p_kst 3.172619e-04   p_cons 8.756214e-01   p_joint 4.577381e-04

Joint ci ratio: 9.980319e-02	ci left: 4.347265e-04	ci right 4.806790e-04	k: 1541	n:3370000
Cons ci ratio: 8.047899e-04	ci left: 8.752703e-01	ci right 8.759753e-01	k: 2950850	n:3370000
KS ci ratio: 1.198749e-01	ci left: 2.981927e-04	ci right 3.365023e-04	k: 1068	n:3370000
SOLH   3370000 perm   4718 sec   (714 perm/sec)   p_kst 3.169139e-04   p_cons 8.756231e-01   p_joint 4.572700e-04

Joint ci ratio: 9.954525e-02	ci left: 4.357482e-04	ci right 4.816827e-04	k: 1549	n:3380000
Cons ci ratio: 8.035671e-04	ci left: 8.752794e-01	ci right 8.759833e-01	k: 2959635	n:3380000
KS ci ratio: 1.195398e-01	ci left: 2.990325e-04	ci right 3.373350e-04	k: 1074	n:3380000
SOLH   3380000 perm   4743 sec   (713 perm/sec)   p_kst 3.177515e-04   p_cons 8.756317e-01   p_joint 4.582840e-04

Joint ci ratio: 9.935312e-02	ci left: 4.361887e-04	ci right 4.820757e-04	k: 1555	n:3390000
Cons ci ratio: 8.023423e-04	ci left: 8.752904e-01	ci right 8.759933e-01	k: 2968427	n:3390000
KS ci ratio: 1.193181e-01	ci left: 2.992951e-04	ci right 3.375551e-04	k: 1078	n:3390000
SOLH   3390000 perm   4769 sec   (711 perm/sec)   p_kst 3.179941e-04   p_cons 8.756422e-01   p_joint 4.587021e-04

Joint ci ratio: 9.919387e-02	ci left: 4.363399e-04	ci right 4.821649e-04	k: 1560	n:3400000
Cons ci ratio: 8.011598e-04	ci left: 8.752914e-01	ci right 8.759932e-01	k: 2977185	n:3400000
KS ci ratio: 1.191525e-01	ci left: 2.992708e-04	ci right 3.374710e-04	k: 1081	n:3400000
SOLH   3400000 perm   4795 sec   (709 perm/sec)   p_kst 3.179412e-04   p_cons 8.756426e-01   p_joint 4.588235e-04

Joint ci ratio: 9.909871e-02	ci left: 4.359182e-04	ci right 4.816525e-04	k: 1563	n:3410000
Cons ci ratio: 7.999642e-04	ci left: 8.752974e-01	ci right 8.759982e-01	k: 2985960	n:3410000
KS ci ratio: 1.190975e-01	ci left: 2.986777e-04	ci right 3.367833e-04	k: 1082	n:3410000
SOLH   3410000 perm   4820 sec   (707 perm/sec)   p_kst 3.173021e-04   p_cons 8.756481e-01   p_joint 4.583578e-04

Joint ci ratio: 9.900383e-02	ci left: 4.354991e-04	ci right 4.811431e-04	k: 1566	n:3420000
Cons ci ratio: 7.988211e-04	ci left: 8.752904e-01	ci right 8.759902e-01	k: 2994691	n:3420000
KS ci ratio: 1.190426e-01	ci left: 2.980881e-04	ci right 3.360997e-04	k: 1083	n:3420000
SOLH   3420000 perm   4845 sec   (706 perm/sec)   p_kst 3.166667e-04   p_cons 8.756406e-01   p_joint 4.578947e-04

Joint ci ratio: 9.881481e-02	ci left: 4.359354e-04	ci right 4.815329e-04	k: 1572	n:3430000
Cons ci ratio: 7.976285e-04	ci left: 8.752984e-01	ci right 8.759971e-01	k: 3003473	n:3430000
KS ci ratio: 1.188783e-01	ci left: 2.980676e-04	ci right 3.360204e-04	k: 1086	n:3430000
SOLH   3430000 perm   4871 sec   (704 perm/sec)   p_kst 3.166181e-04   p_cons 8.756481e-01   p_joint 4.583090e-04

Joint ci ratio: 9.878347e-02	ci left: 4.349516e-04	ci right 4.804310e-04	k: 1573	n:3440000
Cons ci ratio: 7.964847e-04	ci left: 8.752944e-01	ci right 8.759921e-01	k: 3012214	n:3440000
KS ci ratio: 1.188236e-01	ci left: 2.974832e-04	ci right 3.353430e-04	k: 1087	n:3440000
SOLH   3440000 perm   4897 sec   (703 perm/sec)   p_kst 3.159884e-04   p_cons 8.756436e-01   p_joint 4.572674e-04

Joint ci ratio: 9.872080e-02	ci left: 4.342563e-04	ci right 4.796325e-04	k: 1575	n:3450000
Cons ci ratio: 7.953025e-04	ci left: 8.753024e-01	ci right 8.759990e-01	k: 3020996	n:3450000
KS ci ratio: 1.187691e-01	ci left: 2.969022e-04	ci right 3.346694e-04	k: 1088	n:3450000
SOLH   3450000 perm   4922 sec   (701 perm/sec)   p_kst 3.153623e-04   p_cons 8.756510e-01   p_joint 4.565217e-04

Joint ci ratio: 9.859577e-02	ci left: 4.341288e-04	ci right 4.794308e-04	k: 1579	n:3460000
Cons ci ratio: 7.941456e-04	ci left: 8.753047e-01	ci right 8.760004e-01	k: 3029759	n:3460000
KS ci ratio: 1.186602e-01	ci left: 2.966049e-04	ci right 3.342974e-04	k: 1090	n:3460000
SOLH   3460000 perm   4955 sec   (698 perm/sec)   p_kst 3.150289e-04   p_cons 8.756529e-01   p_joint 4.563584e-04

Joint ci ratio: 9.837805e-02	ci left: 4.348453e-04	ci right 4.801161e-04	k: 1586	n:3470000
Cons ci ratio: 7.930031e-04	ci left: 8.753045e-01	ci right 8.759992e-01	k: 3038513	n:3470000
KS ci ratio: 1.184974e-01	ci left: 2.965891e-04	ci right 3.342242e-04	k: 1093	n:3470000
SOLH   3470000 perm   4981 sec   (697 perm/sec)   p_kst 3.149856e-04   p_cons 8.756522e-01   p_joint 4.570605e-04

Joint ci ratio: 9.819258e-02	ci left: 4.352775e-04	ci right 4.805030e-04	k: 1592	n:3480000
Cons ci ratio: 7.919011e-04	ci left: 8.752945e-01	ci right 8.759882e-01	k: 3047233	n:3480000
KS ci ratio: 1.183353e-01	ci left: 2.965734e-04	ci right 3.341513e-04	k: 1096	n:3480000
SOLH   3480000 perm   5007 sec   (695 perm/sec)   p_kst 3.149425e-04   p_cons 8.756417e-01   p_joint 4.574713e-04

Joint ci ratio: 9.806954e-02	ci left: 4.351483e-04	ci right 4.803004e-04	k: 1596	n:3490000
Cons ci ratio: 7.907318e-04	ci left: 8.753044e-01	ci right 8.759970e-01	k: 3056022	n:3490000
KS ci ratio: 1.181738e-01	ci left: 2.965577e-04	ci right 3.340789e-04	k: 1099	n:3490000
SOLH   3490000 perm   5033 sec   (693 perm/sec)   p_kst 3.148997e-04   p_cons 8.756510e-01   p_joint 4.573066e-04

Joint ci ratio: 9.800823e-02	ci left: 4.344624e-04	ci right 4.795136e-04	k: 1598	n:3500000
Cons ci ratio: 7.896092e-04	ci left: 8.753027e-01	ci right 8.759944e-01	k: 3064771	n:3500000
KS ci ratio: 1.180665e-01	ci left: 2.962650e-04	ci right 3.337127e-04	k: 1101	n:3500000
SOLH   3500000 perm   5060 sec   (692 perm/sec)   p_kst 3.145714e-04   p_cons 8.756489e-01   p_joint 4.565714e-04

Joint ci ratio: 9.797765e-02	ci left: 4.335025e-04	ci right 4.784394e-04	k: 1599	n:3510000
Cons ci ratio: 7.885140e-04	ci left: 8.752948e-01	ci right 8.759855e-01	k: 3073498	n:3510000
KS ci ratio: 1.180130e-01	ci left: 2.956974e-04	ci right 3.330553e-04	k: 1102	n:3510000
SOLH   3510000 perm   5086 sec   (690 perm/sec)   p_kst 3.139601e-04   p_cons 8.756405e-01   p_joint 4.555556e-04

Joint ci ratio: 9.785541e-02	ci left: 4.333795e-04	ci right 4.782443e-04	k: 1603	n:3520000
Cons ci ratio: 7.874038e-04	ci left: 8.752923e-01	ci right 8.759821e-01	k: 3082244	n:3520000
KS ci ratio: 1.179062e-01	ci left: 2.954088e-04	ci right 3.326940e-04	k: 1104	n:3520000
SOLH   3520000 perm   5112 sec   (689 perm/sec)   p_kst 3.136364e-04   p_cons 8.756375e-01   p_joint 4.553977e-04

Joint ci ratio: 9.773363e-02	ci left: 4.332573e-04	ci right 4.780504e-04	k: 1607	n:3530000
Cons ci ratio: 7.863116e-04	ci left: 8.752862e-01	ci right 8.759750e-01	k: 3090977	n:3530000
KS ci ratio: 1.177465e-01	ci left: 2.953967e-04	ci right 3.326264e-04	k: 1107	n:3530000
SOLH   3530000 perm   5138 sec   (687 perm/sec)   p_kst 3.135977e-04   p_cons 8.756309e-01   p_joint 4.552408e-04

Joint ci ratio: 9.767295e-02	ci left: 4.325845e-04	ci right 4.772787e-04	k: 1609	n:3540000
Cons ci ratio: 7.852148e-04	ci left: 8.752826e-01	ci right 8.759704e-01	k: 3099719	n:3540000
KS ci ratio: 1.176404e-01	ci left: 2.951106e-04	ci right 3.322684e-04	k: 1109	n:3540000
SOLH   3540000 perm   5164 sec   (685 perm/sec)   p_kst 3.132768e-04   p_cons 8.756268e-01   p_joint 4.545198e-04

Joint ci ratio: 9.752163e-02	ci left: 4.327401e-04	ci right 4.773771e-04	k: 1614	n:3550000
Cons ci ratio: 7.841560e-04	ci left: 8.752698e-01	ci right 8.759567e-01	k: 3108428	n:3550000
KS ci ratio: 1.174817e-01	ci left: 2.950995e-04	ci right 3.322024e-04	k: 1112	n:3550000
SOLH   3550000 perm   5191 sec   (684 perm/sec)   p_kst 3.132394e-04   p_cons 8.756135e-01   p_joint 4.546479e-04

Joint ci ratio: 9.728093e-02	ci left: 4.337170e-04	ci right 4.783381e-04	k: 1622	n:3560000
Cons ci ratio: 7.830409e-04	ci left: 8.752739e-01	ci right 8.759598e-01	k: 3117197	n:3560000
KS ci ratio: 1.172187e-01	ci left: 2.956339e-04	ci right 3.327149e-04	k: 1117	n:3560000
SOLH   3560000 perm   5218 sec   (682 perm/sec)   p_kst 3.137640e-04   p_cons 8.756171e-01   p_joint 4.556180e-04

Joint ci ratio: 9.710159e-02	ci left: 4.341419e-04	ci right 4.787197e-04	k: 1628	n:3570000
Cons ci ratio: 7.819436e-04	ci left: 8.752743e-01	ci right 8.759593e-01	k: 3125953	n:3570000
KS ci ratio: 1.169574e-01	ci left: 2.961653e-04	ci right 3.332245e-04	k: 1122	n:3570000
SOLH   3570000 perm   5244 sec   (681 perm/sec)   p_kst 3.142857e-04   p_cons 8.756171e-01   p_joint 4.560224e-04

Joint ci ratio: 9.695291e-02	ci left: 4.342920e-04	ci right 4.788130e-04	k: 1633	n:3580000
Cons ci ratio: 7.807929e-04	ci left: 8.752910e-01	ci right 8.759749e-01	k: 3134767	n:3580000
KS ci ratio: 1.168534e-01	ci left: 2.958804e-04	ci right 3.328687e-04	k: 1124	n:3580000
SOLH   3580000 perm   5271 sec   (679 perm/sec)   p_kst 3.139665e-04   p_cons 8.756332e-01   p_joint 4.561453e-04

Joint ci ratio: 9.674587e-02	ci left: 4.349849e-04	ci right 4.794763e-04	k: 1640	n:3590000
Cons ci ratio: 7.797329e-04	ci left: 8.752835e-01	ci right 8.759666e-01	k: 3143495	n:3590000
KS ci ratio: 1.164915e-01	ci left: 2.969491e-04	ci right 3.339482e-04	k: 1131	n:3590000
SOLH   3590000 perm   5297 sec   (678 perm/sec)   p_kst 3.150418e-04   p_cons 8.756253e-01   p_joint 4.568245e-04

Joint ci ratio: 9.656947e-02	ci left: 4.354030e-04	ci right 4.798514e-04	k: 1646	n:3600000
Cons ci ratio: 7.786663e-04	ci left: 8.752792e-01	ci right 8.759613e-01	k: 3152234	n:3600000
KS ci ratio: 1.162351e-01	ci left: 2.974728e-04	ci right 3.344499e-04	k: 1136	n:3600000
SOLH   3600000 perm   5323 sec   (676 perm/sec)   p_kst 3.155556e-04   p_cons 8.756206e-01   p_joint 4.572222e-04

Joint ci ratio: 9.651092e-02	ci left: 4.347375e-04	ci right 4.790896e-04	k: 1648	n:3610000
Cons ci ratio: 7.776367e-04	ci left: 8.752658e-01	ci right 8.759469e-01	k: 3160940	n:3610000
KS ci ratio: 1.162351e-01	ci left: 2.966487e-04	ci right 3.335234e-04	k: 1136	n:3610000
SOLH   3610000 perm   5349 sec   (675 perm/sec)   p_kst 3.146814e-04   p_cons 8.756066e-01   p_joint 4.565097e-04

Joint ci ratio: 9.624857e-02	ci left: 4.359628e-04	ci right 4.803122e-04	k: 1657	n:3620000
Cons ci ratio: 7.765304e-04	ci left: 8.752751e-01	ci right 8.759553e-01	k: 3169728	n:3620000
KS ci ratio: 1.159296e-01	ci left: 2.974386e-04	ci right 3.343076e-04	k: 1142	n:3620000
SOLH   3620000 perm   5376 sec   (673 perm/sec)   p_kst 3.154696e-04   p_cons 8.756155e-01   p_joint 4.577348e-04

Joint ci ratio: 9.619060e-02	ci left: 4.352995e-04	ci right 4.795532e-04	k: 1659	n:3630000
Cons ci ratio: 7.754406e-04	ci left: 8.752810e-01	ci right 8.759603e-01	k: 3178504	n:3630000
KS ci ratio: 1.158789e-01	ci left: 2.968867e-04	ci right 3.336701e-04	k: 1143	n:3630000
SOLH   3630000 perm   5403 sec   (672 perm/sec)   p_kst 3.148760e-04   p_cons 8.756209e-01   p_joint 4.570248e-04

Joint ci ratio: 9.607493e-02	ci left: 4.351761e-04	ci right 4.793611e-04	k: 1663	n:3640000
Cons ci ratio: 7.743896e-04	ci left: 8.752773e-01	ci right 8.759556e-01	k: 3187245	n:3640000
KS ci ratio: 1.156769e-01	ci left: 2.971382e-04	ci right 3.338842e-04	k: 1147	n:3640000
SOLH   3640000 perm   5429 sec   (670 perm/sec)   p_kst 3.151099e-04   p_cons 8.756168e-01   p_joint 4.568681e-04

Joint ci ratio: 9.604612e-02	ci left: 4.342513e-04	ci right 4.783284e-04	k: 1664	n:3650000
Cons ci ratio: 7.733029e-04	ci left: 8.752848e-01	ci right 8.759622e-01	k: 3196027	n:3650000
KS ci ratio: 1.156266e-01	ci left: 2.965901e-04	ci right 3.332513e-04	k: 1148	n:3650000
SOLH   3650000 perm   5456 sec   (669 perm/sec)   p_kst 3.145205e-04   p_cons 8.756238e-01   p_joint 4.558904e-04

Joint ci ratio: 9.581616e-02	ci left: 4.351981e-04	ci right 4.792596e-04	k: 1672	n:3660000
Cons ci ratio: 7.722141e-04	ci left: 8.752943e-01	ci right 8.759707e-01	k: 3204816	n:3660000
KS ci ratio: 1.152759e-01	ci left: 2.976371e-04	ci right 3.343086e-04	k: 1155	n:3660000
SOLH   3660000 perm   5483 sec   (667 perm/sec)   p_kst 3.155738e-04   p_cons 8.756328e-01   p_joint 4.568306e-04

Joint ci ratio: 9.575897e-02	ci left: 4.345442e-04	ci right 4.785118e-04	k: 1674	n:3670000
Cons ci ratio: 7.711654e-04	ci left: 8.752936e-01	ci right 8.759691e-01	k: 3213568	n:3670000
KS ci ratio: 1.152261e-01	ci left: 2.970907e-04	ci right 3.336780e-04	k: 1156	n:3670000
SOLH   3670000 perm   5510 sec   (666 perm/sec)   p_kst 3.149864e-04   p_cons 8.756316e-01   p_joint 4.561308e-04

Joint ci ratio: 9.558790e-02	ci left: 4.349548e-04	ci right 4.788809e-04	k: 1680	n:3680000
Cons ci ratio: 7.701009e-04	ci left: 8.752986e-01	ci right 8.759731e-01	k: 3222341	n:3680000
KS ci ratio: 1.149779e-01	ci left: 2.976030e-04	ci right 3.341690e-04	k: 1161	n:3680000
SOLH   3680000 perm   5537 sec   (665 perm/sec)   p_kst 3.154891e-04   p_cons 8.756361e-01   p_joint 4.565217e-04

Joint ci ratio: 9.547439e-02	ci left: 4.348342e-04	ci right 4.786930e-04	k: 1684	n:3690000
Cons ci ratio: 7.690743e-04	ci left: 8.752940e-01	ci right 8.759677e-01	k: 3231079	n:3690000
KS ci ratio: 1.148298e-01	ci left: 2.975861e-04	ci right 3.340998e-04	k: 1164	n:3690000
SOLH   3690000 perm   5565 sec   (663 perm/sec)   p_kst 3.154472e-04   p_cons 8.756312e-01   p_joint 4.563686e-04

Joint ci ratio: 9.533304e-02	ci left: 4.349781e-04	ci right 4.787828e-04	k: 1689	n:3700000
Cons ci ratio: 7.680689e-04	ci left: 8.752847e-01	ci right 8.759575e-01	k: 3239799	n:3700000
KS ci ratio: 1.146331e-01	ci left: 2.978319e-04	ci right 3.343089e-04	k: 1168	n:3700000
SOLH   3700000 perm   5593 sec   (662 perm/sec)   p_kst 3.156757e-04   p_cons 8.756214e-01   p_joint 4.564865e-04

Joint ci ratio: 9.524856e-02	ci left: 4.345950e-04	ci right 4.783202e-04	k: 1692	n:3710000
Cons ci ratio: 7.670352e-04	ci left: 8.752845e-01	ci right 8.759564e-01	k: 3248553	n:3710000
KS ci ratio: 1.145352e-01	ci left: 2.975528e-04	ci right 3.339623e-04	k: 1170	n:3710000
SOLH   3710000 perm   5620 sec   (660 perm/sec)   p_kst 3.153639e-04   p_cons 8.756208e-01   p_joint 4.560647e-04

Joint ci ratio: 9.510821e-02	ci left: 4.347388e-04	ci right 4.784105e-04	k: 1697	n:3720000
Cons ci ratio: 7.659980e-04	ci left: 8.752865e-01	ci right 8.759575e-01	k: 3257315	n:3720000
KS ci ratio: 1.144375e-01	ci left: 2.972751e-04	ci right 3.336176e-04	k: 1172	n:3720000
SOLH   3720000 perm   5647 sec   (659 perm/sec)   p_kst 3.150538e-04   p_cons 8.756223e-01   p_joint 4.561828e-04

Joint ci ratio: 9.502433e-02	ci left: 4.343585e-04	ci right 4.779513e-04	k: 1700	n:3730000
Cons ci ratio: 7.649670e-04	ci left: 8.752880e-01	ci right 8.759581e-01	k: 3266075	n:3730000
KS ci ratio: 1.143888e-01	ci left: 2.967386e-04	ci right 3.329990e-04	k: 1173	n:3730000
SOLH   3730000 perm   5674 sec   (657 perm/sec)   p_kst 3.144772e-04   p_cons 8.756233e-01   p_joint 4.557641e-04

Joint ci ratio: 9.491280e-02	ci left: 4.342412e-04	ci right 4.777683e-04	k: 1704	n:3740000
Cons ci ratio: 7.639157e-04	ci left: 8.752964e-01	ci right 8.759656e-01	k: 3274861	n:3740000
KS ci ratio: 1.142915e-01	ci left: 2.964646e-04	ci right 3.326586e-04	k: 1175	n:3740000
SOLH   3740000 perm   5701 sec   (656 perm/sec)   p_kst 3.141711e-04   p_cons 8.756313e-01   p_joint 4.556150e-04

Joint ci ratio: 9.474622e-02	ci left: 4.346453e-04	ci right 4.781321e-04	k: 1710	n:3750000
Cons ci ratio: 7.629154e-04	ci left: 8.752914e-01	ci right 8.759597e-01	k: 3283597	n:3750000
KS ci ratio: 1.140493e-01	ci left: 2.969693e-04	ci right 3.331429e-04	k: 1180	n:3750000
SOLH   3750000 perm   5729 sec   (655 perm/sec)   p_kst 3.146667e-04   p_cons 8.756259e-01   p_joint 4.560000e-04

Joint ci ratio: 9.466329e-02	ci left: 4.342683e-04	ci right 4.776773e-04	k: 1713	n:3760000
Cons ci ratio: 7.619079e-04	ci left: 8.752897e-01	ci right 8.759571e-01	k: 3292345	n:3760000
KS ci ratio: 1.140494e-01	ci left: 2.961795e-04	ci right 3.322569e-04	k: 1180	n:3760000
SOLH   3760000 perm   5756 sec   (653 perm/sec)   p_kst 3.138298e-04   p_cons 8.756237e-01   p_joint 4.555851e-04

Joint ci ratio: 9.444310e-02	ci left: 4.351882e-04	ci right 4.785824e-04	k: 1721	n:3770000
Cons ci ratio: 7.609202e-04	ci left: 8.752834e-01	ci right 8.759500e-01	k: 3301076	n:3770000
KS ci ratio: 1.138087e-01	ci left: 2.966823e-04	ci right 3.327396e-04	k: 1185	n:3770000
SOLH   3770000 perm   5784 sec   (652 perm/sec)   p_kst 3.143236e-04   p_cons 8.756170e-01   p_joint 4.564987e-04

Joint ci ratio: 9.436096e-02	ci left: 4.348118e-04	ci right 4.781287e-04	k: 1724	n:3780000
Cons ci ratio: 7.598578e-04	ci left: 8.752997e-01	ci right 8.759653e-01	k: 3309892	n:3780000
KS ci ratio: 1.136650e-01	ci left: 2.966685e-04	ci right 3.326756e-04	k: 1188	n:3780000
SOLH   3780000 perm   5813 sec   (650 perm/sec)   p_kst 3.142857e-04   p_cons 8.756328e-01   p_joint 4.560847e-04

Joint ci ratio: 9.417005e-02	ci left: 4.354680e-04	ci right 4.787576e-04	k: 1731	n:3790000
Cons ci ratio: 7.588733e-04	ci left: 8.752948e-01	ci right 8.759595e-01	k: 3318628	n:3790000
KS ci ratio: 1.134267e-01	ci left: 2.971676e-04	ci right 3.331545e-04	k: 1193	n:3790000
SOLH   3790000 perm   5840 sec   (649 perm/sec)   p_kst 3.147757e-04   p_cons 8.756274e-01   p_joint 4.567282e-04

Joint ci ratio: 9.403441e-02	ci left: 4.356069e-04	ci right 4.788445e-04	k: 1736	n:3800000
Cons ci ratio: 7.578424e-04	ci left: 8.753044e-01	ci right 8.759682e-01	k: 3327419	n:3800000
KS ci ratio: 1.133319e-01	ci left: 2.968969e-04	ci right 3.328191e-04	k: 1195	n:3800000
SOLH   3800000 perm   5868 sec   (648 perm/sec)   p_kst 3.144737e-04   p_cons 8.756366e-01   p_joint 4.568421e-04

Joint ci ratio: 9.381857e-02	ci left: 4.365140e-04	ci right 4.797367e-04	k: 1744	n:3810000
Cons ci ratio: 7.568420e-04	ci left: 8.753063e-01	ci right 8.759693e-01	k: 3336181	n:3810000
KS ci ratio: 1.130957e-01	ci left: 2.973928e-04	ci right 3.332950e-04	k: 1200	n:3810000
SOLH   3810000 perm   5895 sec   (646 perm/sec)   p_kst 3.149606e-04   p_cons 8.756381e-01   p_joint 4.577428e-04

Joint ci ratio: 9.379175e-02	ci left: 4.356269e-04	ci right 4.787488e-04	k: 1745	n:3820000
Cons ci ratio: 7.558783e-04	ci left: 8.752988e-01	ci right 8.759609e-01	k: 3344907	n:3820000
KS ci ratio: 1.130487e-01	ci left: 2.968687e-04	ci right 3.326917e-04	k: 1201	n:3820000
SOLH   3820000 perm   5924 sec   (645 perm/sec)   p_kst 3.143979e-04   p_cons 8.756301e-01   p_joint 4.568063e-04

Joint ci ratio: 9.368450e-02	ci left: 4.355094e-04	ci right 4.785676e-04	k: 1749	n:3830000
Cons ci ratio: 7.548676e-04	ci left: 8.753059e-01	ci right 8.759671e-01	k: 3353689	n:3830000
KS ci ratio: 1.129547e-01	ci left: 2.966010e-04	ci right 3.323600e-04	k: 1203	n:3830000
SOLH   3830000 perm   5952 sec   (643 perm/sec)   p_kst 3.140992e-04   p_cons 8.756368e-01   p_joint 4.566580e-04

Joint ci ratio: 9.360432e-02	ci left: 4.351382e-04	ci right 4.781209e-04	k: 1752	n:3840000
Cons ci ratio: 7.538862e-04	ci left: 8.753057e-01	ci right 8.759661e-01	k: 3362443	n:3840000
KS ci ratio: 1.128143e-01	ci left: 2.965878e-04	ci right 3.322978e-04	k: 1206	n:3840000
SOLH   3840000 perm   5981 sec   (642 perm/sec)   p_kst 3.140625e-04   p_cons 8.756362e-01   p_joint 4.562500e-04

Joint ci ratio: 9.349772e-02	ci left: 4.350226e-04	ci right 4.779423e-04	k: 1756	n:3850000
Cons ci ratio: 7.528934e-04	ci left: 8.753100e-01	ci right 8.759695e-01	k: 3371214	n:3850000
KS ci ratio: 1.127676e-01	ci left: 2.960699e-04	ci right 3.317017e-04	k: 1207	n:3850000
SOLH   3850000 perm   6009 sec   (641 perm/sec)   p_kst 3.135065e-04   p_cons 8.756400e-01   p_joint 4.561039e-04

Joint ci ratio: 9.336496e-02	ci left: 4.351607e-04	ci right 4.780297e-04	k: 1761	n:3860000
Cons ci ratio: 7.519679e-04	ci left: 8.752958e-01	ci right 8.759545e-01	k: 3379914	n:3860000
KS ci ratio: 1.125814e-01	ci left: 2.963099e-04	ci right 3.319078e-04	k: 1211	n:3860000
SOLH   3860000 perm   6037 sec   (639 perm/sec)   p_kst 3.137306e-04   p_cons 8.756254e-01   p_joint 4.562176e-04

Joint ci ratio: 9.323277e-02	ci left: 4.352981e-04	ci right 4.781166e-04	k: 1766	n:3870000
Cons ci ratio: 7.509488e-04	ci left: 8.753098e-01	ci right 8.759676e-01	k: 3388723	n:3870000
KS ci ratio: 1.123960e-01	ci left: 2.965488e-04	ci right 3.321129e-04	k: 1215	n:3870000
SOLH   3870000 perm   6065 sec   (638 perm/sec)   p_kst 3.139535e-04   p_cons 8.756390e-01   p_joint 4.563307e-04

Joint ci ratio: 9.304861e-02	ci left: 4.359383e-04	ci right 4.787305e-04	k: 1773	n:3880000
Cons ci ratio: 7.500039e-04	ci left: 8.753034e-01	ci right 8.759604e-01	k: 3397453	n:3880000
KS ci ratio: 1.121656e-01	ci left: 2.970369e-04	ci right 3.325817e-04	k: 1220	n:3880000
SOLH   3880000 perm   6094 sec   (637 perm/sec)   p_kst 3.144330e-04   p_cons 8.756322e-01   p_joint 4.569588e-04

Joint ci ratio: 9.294389e-02	ci left: 4.358220e-04	ci right 4.785520e-04	k: 1777	n:3890000
Cons ci ratio: 7.490174e-04	ci left: 8.753102e-01	ci right 8.759663e-01	k: 3406234	n:3890000
KS ci ratio: 1.120281e-01	ci left: 2.970229e-04	ci right 3.325196e-04	k: 1223	n:3890000
SOLH   3890000 perm   6123 sec   (635 perm/sec)   p_kst 3.143959e-04   p_cons 8.756386e-01   p_joint 4.568123e-04

Joint ci ratio: 9.281348e-02	ci left: 4.359568e-04	ci right 4.786368e-04	k: 1782	n:3900000
Cons ci ratio: 7.480586e-04	ci left: 8.753100e-01	ci right 8.759653e-01	k: 3414988	n:3900000
KS ci ratio: 1.118455e-01	ci left: 2.972583e-04	ci right 3.327213e-04	k: 1227	n:3900000
SOLH   3900000 perm   6151 sec   (634 perm/sec)   p_kst 3.146154e-04   p_cons 8.756379e-01   p_joint 4.569231e-04

Joint ci ratio: 9.265769e-02	ci left: 4.363407e-04	ci right 4.789827e-04	k: 1788	n:3910000
Cons ci ratio: 7.470974e-04	ci left: 8.753116e-01	ci right 8.759661e-01	k: 3423749	n:3910000
KS ci ratio: 1.116184e-01	ci left: 2.977410e-04	ci right 3.331849e-04	k: 1232	n:3910000
SOLH   3910000 perm   6180 sec   (633 perm/sec)   p_kst 3.150895e-04   p_cons 8.756391e-01   p_joint 4.572890e-04

Joint ci ratio: 9.247692e-02	ci left: 4.369720e-04	ci right 4.795879e-04	k: 1795	n:3920000
Cons ci ratio: 7.461678e-04	ci left: 8.753051e-01	ci right 8.759587e-01	k: 3432478	n:3920000
KS ci ratio: 1.113928e-01	ci left: 2.982214e-04	ci right 3.336460e-04	k: 1237	n:3920000
SOLH   3920000 perm   6209 sec   (631 perm/sec)   p_kst 3.155612e-04   p_cons 8.756321e-01   p_joint 4.579082e-04

Joint ci ratio: 9.239979e-02	ci left: 4.366058e-04	ci right 4.791486e-04	k: 1798	n:3930000
Cons ci ratio: 7.452346e-04	ci left: 8.753006e-01	ci right 8.759533e-01	k: 3441215	n:3930000
KS ci ratio: 1.112581e-01	ci left: 2.982047e-04	ci right 3.335816e-04	k: 1240	n:3930000
SOLH   3930000 perm   6238 sec   (630 perm/sec)   p_kst 3.155216e-04   p_cons 8.756272e-01   p_joint 4.575064e-04

Joint ci ratio: 9.229725e-02	ci left: 4.364895e-04	ci right 4.789711e-04	k: 1802	n:3940000
Cons ci ratio: 7.442912e-04	ci left: 8.753001e-01	ci right 8.759521e-01	k: 3449968	n:3940000
KS ci ratio: 1.110792e-01	ci left: 2.984349e-04	ci right 3.337784e-04	k: 1244	n:3940000
SOLH   3940000 perm   6268 sec   (629 perm/sec)   p_kst 3.157360e-04   p_cons 8.756264e-01   p_joint 4.573604e-04

Joint ci ratio: 9.222058e-02	ci left: 4.361264e-04	ci right 4.785355e-04	k: 1805	n:3950000
Cons ci ratio: 7.433702e-04	ci left: 8.752941e-01	ci right 8.759453e-01	k: 3458699	n:3950000
KS ci ratio: 1.109901e-01	ci left: 2.981716e-04	ci right 3.334538e-04	k: 1246	n:3950000
SOLH   3950000 perm   6298 sec   (627 perm/sec)   p_kst 3.154430e-04   p_cons 8.756200e-01   p_joint 4.569620e-04

Joint ci ratio: 9.211863e-02	ci left: 4.360119e-04	ci right 4.783605e-04	k: 1809	n:3960000
Cons ci ratio: 7.424502e-04	ci left: 8.752889e-01	ci right 8.759393e-01	k: 3467433	n:3960000
KS ci ratio: 1.108568e-01	ci left: 2.981552e-04	ci right 3.333903e-04	k: 1249	n:3960000
SOLH   3960000 perm   6327 sec   (626 perm/sec)   p_kst 3.154040e-04   p_cons 8.756144e-01   p_joint 4.568182e-04

Joint ci ratio: 9.191568e-02	ci left: 4.368824e-04	ci right 4.792170e-04	k: 1817	n:3970000
Cons ci ratio: 7.415541e-04	ci left: 8.752777e-01	ci right 8.759273e-01	k: 3476143	n:3970000
KS ci ratio: 1.105917e-01	ci left: 2.988737e-04	ci right 3.341037e-04	k: 1255	n:3970000
SOLH   3970000 perm   6356 sec   (625 perm/sec)   p_kst 3.161209e-04   p_cons 8.756028e-01   p_joint 4.576826e-04

Joint ci ratio: 9.181474e-02	ci left: 4.367666e-04	ci right 4.790411e-04	k: 1821	n:3980000
Cons ci ratio: 7.406279e-04	ci left: 8.752764e-01	ci right 8.759251e-01	k: 3484892	n:3980000
KS ci ratio: 1.104160e-01	ci left: 2.991000e-04	ci right 3.342970e-04	k: 1259	n:3980000
SOLH   3980000 perm   6386 sec   (623 perm/sec)   p_kst 3.163317e-04   p_cons 8.756010e-01   p_joint 4.575377e-04

Joint ci ratio: 9.163884e-02	ci left: 4.373861e-04	ci right 4.796351e-04	k: 1828	n:3990000
Cons ci ratio: 7.397043e-04	ci left: 8.752753e-01	ci right 8.759232e-01	k: 3493642	n:3990000
KS ci ratio: 1.101975e-01	ci left: 2.995689e-04	ci right 3.347469e-04	k: 1264	n:3990000
SOLH   3990000 perm   6415 sec   (622 perm/sec)   p_kst 3.167920e-04   p_cons 8.755995e-01   p_joint 4.581454e-04

Joint ci ratio: 9.161384e-02	ci left: 4.365369e-04	ci right 4.786917e-04	k: 1829	n:4000000
Cons ci ratio: 7.387494e-04	ci left: 8.752844e-01	ci right 8.759315e-01	k: 3502433	n:4000000
KS ci ratio: 1.101540e-01	ci left: 2.990631e-04	ci right 3.341669e-04	k: 1265	n:4000000
SOLH   4000000 perm   6445 sec   (621 perm/sec)   p_kst 3.162500e-04   p_cons 8.756082e-01   p_joint 4.572500e-04

Joint ci ratio: 9.153886e-02	ci left: 4.361793e-04	ci right 4.782632e-04	k: 1832	n:4010000
Cons ci ratio: 7.378455e-04	ci left: 8.752796e-01	ci right 8.759259e-01	k: 3511168	n:4010000
KS ci ratio: 1.100671e-01	ci left: 2.988023e-04	ci right 3.338460e-04	k: 1267	n:4010000
SOLH   4010000 perm   6475 sec   (619 perm/sec)   p_kst 3.159601e-04   p_cons 8.756030e-01   p_joint 4.568579e-04

Joint ci ratio: 9.141426e-02	ci left: 4.363096e-04	ci right 4.783458e-04	k: 1837	n:4020000
Cons ci ratio: 7.369272e-04	ci left: 8.752800e-01	ci right 8.759255e-01	k: 3519924	n:4020000
KS ci ratio: 1.099805e-01	ci left: 2.985428e-04	ci right 3.335268e-04	k: 1269	n:4020000
SOLH   4020000 perm   6505 sec   (618 perm/sec)   p_kst 3.156716e-04   p_cons 8.756030e-01   p_joint 4.569652e-04

Joint ci ratio: 9.133977e-02	ci left: 4.359543e-04	ci right 4.779202e-04	k: 1840	n:4030000
Cons ci ratio: 7.359831e-04	ci left: 8.752891e-01	ci right 8.759337e-01	k: 3528715	n:4030000
KS ci ratio: 1.098940e-01	ci left: 2.982847e-04	ci right 3.332091e-04	k: 1271	n:4030000
SOLH   4030000 perm   6535 sec   (617 perm/sec)   p_kst 3.153846e-04   p_cons 8.756117e-01   p_joint 4.565757e-04

Joint ci ratio: 9.133982e-02	ci left: 4.348752e-04	ci right 4.767373e-04	k: 1840	n:4040000
Cons ci ratio: 7.351060e-04	ci left: 8.752793e-01	ci right 8.759232e-01	k: 3537430	n:4040000
KS ci ratio: 1.098940e-01	ci left: 2.975463e-04	ci right 3.323843e-04	k: 1271	n:4040000
SOLH   4040000 perm   6564 sec   (615 perm/sec)   p_kst 3.146040e-04   p_cons 8.756015e-01   p_joint 4.554455e-04

Joint ci ratio: 9.119132e-02	ci left: 4.352491e-04	ci right 4.770754e-04	k: 1846	n:4050000
Cons ci ratio: 7.342162e-04	ci left: 8.752742e-01	ci right 8.759173e-01	k: 3546164	n:4050000
KS ci ratio: 1.096357e-01	ci left: 2.982525e-04	ci right 3.330858e-04	k: 1277	n:4050000
SOLH   4050000 perm   6594 sec   (614 perm/sec)   p_kst 3.153086e-04   p_cons 8.755960e-01   p_joint 4.558025e-04

Joint ci ratio: 9.106814e-02	ci left: 4.353805e-04	ci right 4.771599e-04	k: 1851	n:4060000
Cons ci ratio: 7.333321e-04	ci left: 8.752685e-01	ci right 8.759108e-01	k: 3554895	n:4060000
KS ci ratio: 1.094645e-01	ci left: 2.984761e-04	ci right 3.332775e-04	k: 1281	n:4060000
SOLH   4060000 perm   6624 sec   (613 perm/sec)   p_kst 3.155172e-04   p_cons 8.755899e-01   p_joint 4.559113e-04

Joint ci ratio: 9.099448e-02	ci left: 4.350311e-04	ci right 4.767414e-04	k: 1854	n:4070000
Cons ci ratio: 7.324025e-04	ci left: 8.752773e-01	ci right 8.759188e-01	k: 3563685	n:4070000
KS ci ratio: 1.093367e-01	ci left: 2.984597e-04	ci right 3.332159e-04	k: 1284	n:4070000
SOLH   4070000 perm   6655 sec   (612 perm/sec)   p_kst 3.154791e-04   p_cons 8.755983e-01   p_joint 4.555283e-04

Joint ci ratio: 9.077449e-02	ci left: 4.361206e-04	ci right 4.778289e-04	k: 1863	n:4080000
Cons ci ratio: 7.315208e-04	ci left: 8.752727e-01	ci right 8.759135e-01	k: 3572421	n:4080000
KS ci ratio: 1.090400e-01	ci left: 2.993970e-04	ci right 3.341618e-04	k: 1291	n:4080000
SOLH   4080000 perm   6685 sec   (610 perm/sec)   p_kst 3.164216e-04   p_cons 8.755934e-01   p_joint 4.566176e-04

Joint ci ratio: 9.072586e-02	ci left: 4.355322e-04	ci right 4.771608e-04	k: 1865	n:4090000
Cons ci ratio: 7.306686e-04	ci left: 8.752604e-01	ci right 8.759004e-01	k: 3581125	n:4090000
KS ci ratio: 1.090401e-01	ci left: 2.986650e-04	ci right 3.333447e-04	k: 1291	n:4090000
SOLH   4090000 perm   6715 sec   (609 perm/sec)   p_kst 3.156479e-04   p_cons 8.755807e-01   p_joint 4.559902e-04

Joint ci ratio: 9.070160e-02	ci left: 4.347083e-04	ci right 4.762464e-04	k: 1866	n:4100000
Cons ci ratio: 7.297760e-04	ci left: 8.752611e-01	ci right 8.759003e-01	k: 3589882	n:4100000
KS ci ratio: 1.089979e-01	ci left: 2.981737e-04	ci right 3.327823e-04	k: 1292	n:4100000
SOLH   4100000 perm   6746 sec   (608 perm/sec)   p_kst 3.151220e-04   p_cons 8.755810e-01   p_joint 4.551220e-04

Joint ci ratio: 9.058039e-02	ci left: 4.348396e-04	ci right 4.763317e-04	k: 1871	n:4110000
Cons ci ratio: 7.289249e-04	ci left: 8.752503e-01	ci right 8.758888e-01	k: 3598592	n:4110000
KS ci ratio: 1.088297e-01	ci left: 2.983950e-04	ci right 3.329723e-04	k: 1296	n:4110000
SOLH   4110000 perm   6775 sec   (607 perm/sec)   p_kst 3.153285e-04   p_cons 8.755698e-01   p_joint 4.552311e-04

Joint ci ratio: 9.041148e-02	ci left: 4.354447e-04	ci right 4.769131e-04	k: 1878	n:4120000
Cons ci ratio: 7.280606e-04	ci left: 8.752445e-01	ci right 8.758822e-01	k: 3607322	n:4120000
KS ci ratio: 1.086623e-01	ci left: 2.986152e-04	ci right 3.331614e-04	k: 1300	n:4120000
SOLH   4120000 perm   6806 sec   (605 perm/sec)   p_kst 3.155340e-04   p_cons 8.755636e-01   p_joint 4.558252e-04

Joint ci ratio: 9.024351e-02	ci left: 4.360470e-04	ci right 4.774915e-04	k: 1885	n:4130000
Cons ci ratio: 7.271347e-04	ci left: 8.752580e-01	ci right 8.758949e-01	k: 3616132	n:4130000
KS ci ratio: 1.084540e-01	ci left: 2.990699e-04	ci right 3.335982e-04	k: 1305	n:4130000
SOLH   4130000 perm   6837 sec   (604 perm/sec)   p_kst 3.159806e-04   p_cons 8.755768e-01   p_joint 4.564165e-04

Joint ci ratio: 9.014797e-02	ci left: 4.359382e-04	ci right 4.773261e-04	k: 1889	n:4140000
Cons ci ratio: 7.262317e-04	ci left: 8.752657e-01	ci right 8.759018e-01	k: 3624918	n:4140000
KS ci ratio: 1.082883e-01	ci left: 2.992876e-04	ci right 3.337848e-04	k: 1309	n:4140000
SOLH   4140000 perm   6867 sec   (603 perm/sec)   p_kst 3.161836e-04   p_cons 8.755841e-01   p_joint 4.562802e-04

Joint ci ratio: 8.998147e-02	ci left: 4.365365e-04	ci right 4.779006e-04	k: 1896	n:4150000
Cons ci ratio: 7.253320e-04	ci left: 8.752734e-01	ci right 8.759087e-01	k: 3633704	n:4150000
KS ci ratio: 1.080412e-01	ci left: 2.999731e-04	ci right 3.344653e-04	k: 1315	n:4150000
SOLH   4150000 perm   6898 sec   (602 perm/sec)   p_kst 3.168675e-04   p_cons 8.755913e-01   p_joint 4.568675e-04

Joint ci ratio: 8.986311e-02	ci left: 4.366620e-04	ci right 4.779808e-04	k: 1901	n:4160000
Cons ci ratio: 7.244964e-04	ci left: 8.752627e-01	ci right 8.758973e-01	k: 3642414	n:4160000
KS ci ratio: 1.078773e-01	ci left: 3.001875e-04	ci right 3.346488e-04	k: 1319	n:4160000
SOLH   4160000 perm   6929 sec   (600 perm/sec)   p_kst 3.170673e-04   p_cons 8.755803e-01   p_joint 4.569712e-04

Joint ci ratio: 8.976877e-02	ci left: 4.365525e-04	ci right 4.778153e-04	k: 1905	n:4170000
Cons ci ratio: 7.236342e-04	ci left: 8.752610e-01	ci right 8.758948e-01	k: 3651161	n:4170000
KS ci ratio: 1.078365e-01	ci left: 2.997010e-04	ci right 3.340926e-04	k: 1320	n:4170000
SOLH   4170000 perm   6959 sec   (599 perm/sec)   p_kst 3.165468e-04   p_cons 8.755782e-01   p_joint 4.568345e-04

Joint ci ratio: 8.974527e-02	ci left: 4.357420e-04	ci right 4.769168e-04	k: 1906	n:4180000
Cons ci ratio: 7.227845e-04	ci left: 8.752564e-01	ci right 8.758895e-01	k: 3659896	n:4180000
KS ci ratio: 1.077957e-01	ci left: 2.992168e-04	ci right 3.335390e-04	k: 1321	n:4180000
SOLH   4180000 perm   6990 sec   (598 perm/sec)   p_kst 3.160287e-04   p_cons 8.755732e-01   p_joint 4.559809e-04

Joint ci ratio: 8.965130e-02	ci left: 4.356353e-04	ci right 4.767547e-04	k: 1910	n:4190000
Cons ci ratio: 7.218770e-04	ci left: 8.752702e-01	ci right 8.759025e-01	k: 3668708	n:4190000
KS ci ratio: 1.076736e-01	ci left: 2.991994e-04	ci right 3.334783e-04	k: 1324	n:4190000
SOLH   4190000 perm   7022 sec   (597 perm/sec)   p_kst 3.159905e-04   p_cons 8.755866e-01   p_joint 4.558473e-04

Joint ci ratio: 8.955763e-02	ci left: 4.355291e-04	ci right 4.765933e-04	k: 1914	n:4200000
Cons ci ratio: 7.210123e-04	ci left: 8.752721e-01	ci right 8.759036e-01	k: 3677470	n:4200000
KS ci ratio: 1.075115e-01	ci left: 2.994137e-04	ci right 3.336623e-04	k: 1328	n:4200000
SOLH   4200000 perm   7053 sec   (595 perm/sec)   p_kst 3.161905e-04   p_cons 8.755881e-01   p_joint 4.557143e-04

Joint ci ratio: 8.939437e-02	ci left: 4.361201e-04	ci right 4.771611e-04	k: 1921	n:4210000
Cons ci ratio: 7.201515e-04	ci left: 8.752737e-01	ci right 8.759044e-01	k: 3686231	n:4210000
KS ci ratio: 1.073098e-01	ci left: 2.998583e-04	ci right 3.340893e-04	k: 1333	n:4210000
SOLH   4210000 perm   7085 sec   (594 perm/sec)   p_kst 3.166271e-04   p_cons 8.755893e-01   p_joint 4.562945e-04

Joint ci ratio: 8.937116e-02	ci left: 4.353183e-04	ci right 4.762727e-04	k: 1922	n:4220000
Cons ci ratio: 7.192913e-04	ci left: 8.752760e-01	ci right 8.759060e-01	k: 3694995	n:4220000
KS ci ratio: 1.072696e-01	ci left: 2.993783e-04	ci right 3.335409e-04	k: 1334	n:4220000
SOLH   4220000 perm   7117 sec   (593 perm/sec)   p_kst 3.161137e-04   p_cons 8.755912e-01   p_joint 4.554502e-04

Joint ci ratio: 8.927836e-02	ci left: 4.352137e-04	ci right 4.761135e-04	k: 1926	n:4230000
Cons ci ratio: 7.184257e-04	ci left: 8.752809e-01	ci right 8.759101e-01	k: 3703770	n:4230000
KS ci ratio: 1.071493e-01	ci left: 2.993608e-04	ci right 3.334806e-04	k: 1337	n:4230000
SOLH   4230000 perm   7148 sec   (592 perm/sec)   p_kst 3.160757e-04   p_cons 8.755957e-01   p_joint 4.553191e-04

Joint ci ratio: 8.916276e-02	ci left: 4.353402e-04	ci right 4.761961e-04	k: 1931	n:4240000
Cons ci ratio: 7.175966e-04	ci left: 8.752756e-01	ci right 8.759041e-01	k: 3712502	n:4240000
KS ci ratio: 1.070294e-01	ci left: 2.993433e-04	ci right 3.334206e-04	k: 1340	n:4240000
SOLH   4240000 perm   7179 sec   (591 perm/sec)   p_kst 3.160377e-04   p_cons 8.755901e-01   p_joint 4.554245e-04

Joint ci ratio: 8.907060e-02	ci left: 4.352361e-04	ci right 4.760378e-04	k: 1935	n:4250000
Cons ci ratio: 7.167650e-04	ci left: 8.752720e-01	ci right 8.758998e-01	k: 3721241	n:4250000
KS ci ratio: 1.068701e-01	ci left: 2.995550e-04	ci right 3.336024e-04	k: 1344	n:4250000
SOLH   4250000 perm   7211 sec   (589 perm/sec)   p_kst 3.162353e-04   p_cons 8.755861e-01   p_joint 4.552941e-04

Joint ci ratio: 8.895580e-02	ci left: 4.353620e-04	ci right 4.761202e-04	k: 1940	n:4260000
Cons ci ratio: 7.158853e-04	ci left: 8.752839e-01	ci right 8.759109e-01	k: 3730046	n:4260000
KS ci ratio: 1.067511e-01	ci left: 2.995372e-04	ci right 3.335423e-04	k: 1347	n:4260000
SOLH   4260000 perm   7242 sec   (588 perm/sec)   p_kst 3.161972e-04   p_cons 8.755977e-01   p_joint 4.553991e-04

Joint ci ratio: 8.881862e-02	ci left: 4.357163e-04	ci right 4.764415e-04	k: 1946	n:4270000
Cons ci ratio: 7.150504e-04	ci left: 8.752831e-01	ci right 8.759094e-01	k: 3738797	n:4270000
KS ci ratio: 1.065931e-01	ci left: 2.997475e-04	ci right 3.337230e-04	k: 1351	n:4270000
SOLH   4270000 perm   7273 sec   (587 perm/sec)   p_kst 3.163934e-04   p_cons 8.755965e-01   p_joint 4.557377e-04

Joint ci ratio: 8.870479e-02	ci left: 4.358406e-04	ci right 4.765225e-04	k: 1951	n:4280000
Cons ci ratio: 7.142153e-04	ci left: 8.752832e-01	ci right 8.759088e-01	k: 3747552	n:4280000
KS ci ratio: 1.064750e-01	ci left: 2.997294e-04	ci right 3.336628e-04	k: 1354	n:4280000
SOLH   4280000 perm   7304 sec   (586 perm/sec)   p_kst 3.163551e-04   p_cons 8.755963e-01   p_joint 4.558411e-04

Joint ci ratio: 8.856876e-02	ci left: 4.361922e-04	ci right 4.768413e-04	k: 1957	n:4290000
Cons ci ratio: 7.133992e-04	ci left: 8.752785e-01	ci right 8.759033e-01	k: 3756286	n:4290000
KS ci ratio: 1.062791e-01	ci left: 3.001653e-04	ci right 3.340816e-04	k: 1359	n:4290000
SOLH   4290000 perm   7336 sec   (585 perm/sec)   p_kst 3.167832e-04   p_cons 8.755911e-01   p_joint 4.561772e-04

Joint ci ratio: 8.847843e-02	ci left: 4.360875e-04	ci right 4.766832e-04	k: 1961	n:4300000
Cons ci ratio: 7.126018e-04	ci left: 8.752688e-01	ci right 8.758930e-01	k: 3764999	n:4300000
KS ci ratio: 1.062010e-01	ci left: 2.999200e-04	ci right 3.337821e-04	k: 1361	n:4300000
SOLH   4300000 perm   7367 sec   (584 perm/sec)   p_kst 3.165116e-04   p_cons 8.755812e-01   p_joint 4.560465e-04

Joint ci ratio: 8.834344e-02	ci left: 4.364370e-04	ci right 4.770001e-04	k: 1967	n:4310000
Cons ci ratio: 7.117881e-04	ci left: 8.752651e-01	ci right 8.758885e-01	k: 3773737	n:4310000
KS ci ratio: 1.060842e-01	ci left: 2.999017e-04	ci right 3.337222e-04	k: 1364	n:4310000
SOLH   4310000 perm   7399 sec   (583 perm/sec)   p_kst 3.164733e-04   p_cons 8.755770e-01   p_joint 4.563805e-04

Joint ci ratio: 8.818672e-02	ci left: 4.370113e-04	ci right 4.775520e-04	k: 1974	n:4320000
Cons ci ratio: 7.110029e-04	ci left: 8.752534e-01	ci right 8.758762e-01	k: 3782441	n:4320000
KS ci ratio: 1.059291e-01	ci left: 3.001088e-04	ci right 3.339002e-04	k: 1368	n:4320000
SOLH   4320000 perm   7431 sec   (581 perm/sec)   p_kst 3.166667e-04   p_cons 8.755650e-01   p_joint 4.569444e-04

Joint ci ratio: 8.809755e-02	ci left: 4.369055e-04	ci right 4.773933e-04	k: 1978	n:4330000
Cons ci ratio: 7.102098e-04	ci left: 8.752451e-01	ci right 8.758671e-01	k: 3791159	n:4330000
KS ci ratio: 1.058133e-01	ci left: 3.000902e-04	ci right 3.338402e-04	k: 1371	n:4330000
SOLH   4330000 perm   7463 sec   (580 perm/sec)   p_kst 3.166282e-04   p_cons 8.755564e-01   p_joint 4.568129e-04

Joint ci ratio: 8.800866e-02	ci left: 4.368002e-04	ci right 4.772352e-04	k: 1982	n:4340000
Cons ci ratio: 7.093750e-04	ci left: 8.752504e-01	ci right 8.758717e-01	k: 3799936	n:4340000
KS ci ratio: 1.056978e-01	ci left: 3.000717e-04	ci right 3.337805e-04	k: 1374	n:4340000
SOLH   4340000 perm   7495 sec   (579 perm/sec)   p_kst 3.165899e-04   p_cons 8.755613e-01   p_joint 4.566820e-04

Joint ci ratio: 8.785371e-02	ci left: 4.373698e-04	ci right 4.777827e-04	k: 1989	n:4350000
Cons ci ratio: 7.085992e-04	ci left: 8.752384e-01	ci right 8.758590e-01	k: 3808638	n:4350000
KS ci ratio: 1.055444e-01	ci left: 3.002772e-04	ci right 3.339570e-04	k: 1378	n:4350000
SOLH   4350000 perm   7526 sec   (578 perm/sec)   p_kst 3.167816e-04   p_cons 8.755490e-01   p_joint 4.572414e-04

Joint ci ratio: 8.774355e-02	ci left: 4.374883e-04	ci right 4.778588e-04	k: 1994	n:4360000
Cons ci ratio: 7.077925e-04	ci left: 8.752368e-01	ci right 8.758567e-01	k: 3817385	n:4360000
KS ci ratio: 1.053916e-01	ci left: 3.004817e-04	ci right 3.341327e-04	k: 1382	n:4360000
SOLH   4360000 perm   7558 sec   (577 perm/sec)   p_kst 3.169725e-04   p_cons 8.755470e-01   p_joint 4.573394e-04

Joint ci ratio: 8.769962e-02	ci left: 4.369348e-04	ci right 4.772330e-04	k: 1996	n:4370000
Cons ci ratio: 7.069959e-04	ci left: 8.752329e-01	ci right 8.758522e-01	k: 3826122	n:4370000
KS ci ratio: 1.053536e-01	ci left: 3.000169e-04	ci right 3.336029e-04	k: 1383	n:4370000
SOLH   4370000 perm   7590 sec   (576 perm/sec)   p_kst 3.164760e-04   p_cons 8.755428e-01   p_joint 4.567506e-04

Joint ci ratio: 8.763384e-02	ci left: 4.366072e-04	ci right 4.768434e-04	k: 1999	n:4380000
Cons ci ratio: 7.061709e-04	ci left: 8.752387e-01	ci right 8.758572e-01	k: 3834901	n:4380000
KS ci ratio: 1.052396e-01	ci left: 2.999988e-04	ci right 3.335443e-04	k: 1386	n:4380000
SOLH   4380000 perm   7622 sec   (575 perm/sec)   p_kst 3.164384e-04   p_cons 8.755482e-01   p_joint 4.563927e-04

Joint ci ratio: 8.756820e-02	ci left: 4.362810e-04	ci right 4.764556e-04	k: 2002	n:4390000
Cons ci ratio: 7.053783e-04	ci left: 8.752353e-01	ci right 8.758531e-01	k: 3843640	n:4390000
KS ci ratio: 1.052396e-01	ci left: 2.993154e-04	ci right 3.327845e-04	k: 1386	n:4390000
SOLH   4390000 perm   7655 sec   (574 perm/sec)   p_kst 3.157175e-04   p_cons 8.755444e-01   p_joint 4.560364e-04

Joint ci ratio: 8.745911e-02	ci left: 4.364010e-04	ci right 4.765339e-04	k: 2007	n:4400000
Cons ci ratio: 7.045744e-04	ci left: 8.752362e-01	ci right 8.758533e-01	k: 3852398	n:4400000
KS ci ratio: 1.050882e-01	ci left: 2.995204e-04	ci right 3.329611e-04	k: 1390	n:4400000
SOLH   4400000 perm   7686 sec   (572 perm/sec)   p_kst 3.159091e-04   p_cons 8.755450e-01   p_joint 4.561364e-04

Joint ci ratio: 8.726372e-02	ci left: 4.374076e-04	ci right 4.775387e-04	k: 2016	n:4410000
Cons ci ratio: 7.038238e-04	ci left: 8.752215e-01	ci right 8.758379e-01	k: 3861087	n:4410000
KS ci ratio: 1.049374e-01	ci left: 2.997244e-04	ci right 3.331370e-04	k: 1394	n:4410000
SOLH   4410000 perm   7719 sec   (571 perm/sec)   p_kst 3.160998e-04   p_cons 8.755299e-01   p_joint 4.571429e-04

Joint ci ratio: 8.722051e-02	ci left: 4.368606e-04	ci right 4.769207e-04	k: 2018	n:4420000
Cons ci ratio: 7.030821e-04	ci left: 8.752048e-01	ci right 8.758205e-01	k: 3869767	n:4420000
KS ci ratio: 1.049374e-01	ci left: 2.990463e-04	ci right 3.323833e-04	k: 1394	n:4420000
SOLH   4420000 perm   7751 sec   (570 perm/sec)   p_kst 3.153846e-04   p_cons 8.755129e-01   p_joint 4.565611e-04

Joint ci ratio: 8.722056e-02	ci left: 4.358745e-04	ci right 4.758441e-04	k: 2018	n:4430000
Cons ci ratio: 7.023107e-04	ci left: 8.751981e-01	ci right 8.758132e-01	k: 3878491	n:4430000
KS ci ratio: 1.049375e-01	ci left: 2.983712e-04	ci right 3.316330e-04	k: 1394	n:4430000
SOLH   4430000 perm   7788 sec   (569 perm/sec)   p_kst 3.146727e-04   p_cons 8.755059e-01   p_joint 4.555305e-04

Joint ci ratio: 8.713429e-02	ci left: 4.357740e-04	ci right 4.756929e-04	k: 2022	n:4440000
Cons ci ratio: 7.015368e-04	ci left: 8.751930e-01	ci right 8.758074e-01	k: 3887222	n:4440000
KS ci ratio: 1.048623e-01	ci left: 2.981378e-04	ci right 3.313483e-04	k: 1396	n:4440000
SOLH   4440000 perm   7821 sec   (568 perm/sec)   p_kst 3.144144e-04   p_cons 8.755005e-01   p_joint 4.554054e-04

Joint ci ratio: 8.706977e-02	ci left: 4.354542e-04	ci right 4.753128e-04	k: 2025	n:4450000
Cons ci ratio: 7.007561e-04	ci left: 8.751909e-01	ci right 8.758046e-01	k: 3895966	n:4450000
KS ci ratio: 1.047874e-01	ci left: 2.979055e-04	ci right 3.310649e-04	k: 1398	n:4450000
SOLH   4450000 perm   7854 sec   (567 perm/sec)   p_kst 3.141573e-04   p_cons 8.754980e-01   p_joint 4.550562e-04

Joint ci ratio: 8.694112e-02	ci left: 4.357939e-04	ci right 4.756216e-04	k: 2031	n:4460000
Cons ci ratio: 6.999571e-04	ci left: 8.751953e-01	ci right 8.758083e-01	k: 3904739	n:4460000
KS ci ratio: 1.046379e-01	ci left: 2.981110e-04	ci right 3.312430e-04	k: 1402	n:4460000
SOLH   4460000 perm   7887 sec   (565 perm/sec)   p_kst 3.143498e-04   p_cons 8.755020e-01   p_joint 4.553812e-04

Joint ci ratio: 8.689839e-02	ci left: 4.352567e-04	ci right 4.750148e-04	k: 2033	n:4470000
Cons ci ratio: 6.991421e-04	ci left: 8.752055e-01	ci right 8.758178e-01	k: 3913538	n:4470000
KS ci ratio: 1.045634e-01	ci left: 2.978798e-04	ci right 3.309611e-04	k: 1404	n:4470000
SOLH   4470000 perm   7920 sec   (564 perm/sec)   p_kst 3.140940e-04   p_cons 8.755119e-01   p_joint 4.548098e-04

Joint ci ratio: 8.685572e-02	ci left: 4.347218e-04	ci right 4.744106e-04	k: 2035	n:4480000
Cons ci ratio: 6.983922e-04	ci left: 8.751962e-01	ci right 8.758078e-01	k: 3922250	n:4480000
KS ci ratio: 1.044890e-01	ci left: 2.976496e-04	ci right 3.306804e-04	k: 1406	n:4480000
SOLH   4480000 perm   7953 sec   (563 perm/sec)   p_kst 3.138393e-04   p_cons 8.755022e-01   p_joint 4.542411e-04

Joint ci ratio: 8.677053e-02	ci left: 4.346252e-04	ci right 4.742642e-04	k: 2039	n:4490000
Cons ci ratio: 6.975984e-04	ci left: 8.752014e-01	ci right 8.758124e-01	k: 3931027	n:4490000
KS ci ratio: 1.043408e-01	ci left: 2.978543e-04	ci right 3.308581e-04	k: 1410	n:4490000
SOLH   4490000 perm   7986 sec   (562 perm/sec)   p_kst 3.140312e-04   p_cons 8.755071e-01   p_joint 4.541203e-04

Joint ci ratio: 8.668559e-02	ci left: 4.345289e-04	ci right 4.741185e-04	k: 2043	n:4500000
Cons ci ratio: 6.968506e-04	ci left: 8.751931e-01	ci right 8.758034e-01	k: 3939743	n:4500000
KS ci ratio: 1.042301e-01	ci left: 2.978417e-04	ci right 3.308069e-04	k: 1413	n:4500000
SOLH   4500000 perm   8018 sec   (561 perm/sec)   p_kst 3.140000e-04   p_cons 8.754984e-01   p_joint 4.540000e-04

Joint ci ratio: 8.666443e-02	ci left: 4.337824e-04	ci right 4.732937e-04	k: 2044	n:4510000
Cons ci ratio: 6.960698e-04	ci left: 8.751958e-01	ci right 8.758055e-01	k: 3948509	n:4510000
KS ci ratio: 1.041933e-01	ci left: 2.973972e-04	ci right 3.303009e-04	k: 1414	n:4510000
SOLH   4510000 perm   8051 sec   (560 perm/sec)   p_kst 3.135255e-04   p_cons 8.755009e-01   p_joint 4.532151e-04

Joint ci ratio: 8.657980e-02	ci left: 4.336885e-04	ci right 4.731507e-04	k: 2048	n:4520000
Cons ci ratio: 6.952500e-04	ci left: 8.752117e-01	ci right 8.758206e-01	k: 3957334	n:4520000
KS ci ratio: 1.040463e-01	ci left: 2.976012e-04	ci right 3.304781e-04	k: 1418	n:4520000
SOLH   4520000 perm   8083 sec   (559 perm/sec)   p_kst 3.137168e-04   p_cons 8.755164e-01   p_joint 4.530973e-04

Joint ci ratio: 8.655871e-02	ci left: 4.329471e-04	ci right 4.723318e-04	k: 2049	n:4530000
Cons ci ratio: 6.944929e-04	ci left: 8.752087e-01	ci right 8.758169e-01	k: 3966074	n:4530000
KS ci ratio: 1.040463e-01	ci left: 2.969442e-04	ci right 3.297486e-04	k: 1418	n:4530000
SOLH   4530000 perm   8116 sec   (558 perm/sec)   p_kst 3.130243e-04   p_cons 8.755130e-01   p_joint 4.523179e-04

Joint ci ratio: 8.647440e-02	ci left: 4.328554e-04	ci right 4.721915e-04	k: 2053	n:4540000
Cons ci ratio: 6.937396e-04	ci left: 8.752052e-01	ci right 8.758128e-01	k: 3974812	n:4540000
KS ci ratio: 1.039000e-01	ci left: 2.971483e-04	ci right 3.299262e-04	k: 1422	n:4540000
SOLH   4540000 perm   8149 sec   (557 perm/sec)   p_kst 3.132159e-04   p_cons 8.755093e-01   p_joint 4.522026e-04

Joint ci ratio: 8.634836e-02	ci left: 4.331943e-04	ci right 4.725009e-04	k: 2059	n:4550000
Cons ci ratio: 6.929706e-04	ci left: 8.752075e-01	ci right 8.758144e-01	k: 3983576	n:4550000
KS ci ratio: 1.037543e-01	ci left: 2.973515e-04	ci right 3.301031e-04	k: 1426	n:4550000
SOLH   4550000 perm   8183 sec   (556 perm/sec)   p_kst 3.134066e-04   p_cons 8.755112e-01   p_joint 4.525275e-04

Joint ci ratio: 8.630649e-02	ci left: 4.326734e-04	ci right 4.719128e-04	k: 2061	n:4560000
Cons ci ratio: 6.922237e-04	ci left: 8.752037e-01	ci right 8.758099e-01	k: 3992312	n:4560000
KS ci ratio: 1.037179e-01	ci left: 2.969130e-04	ci right 3.296041e-04	k: 1427	n:4560000
SOLH   4560000 perm   8216 sec   (555 perm/sec)   p_kst 3.129386e-04   p_cons 8.755070e-01   p_joint 4.519737e-04

Joint ci ratio: 8.616035e-02	ci left: 4.332254e-04	ci right 4.724449e-04	k: 2068	n:4570000
Cons ci ratio: 6.914847e-04	ci left: 8.751981e-01	ci right 8.758037e-01	k: 4001040	n:4570000
KS ci ratio: 1.035007e-01	ci left: 2.975422e-04	ci right 3.302298e-04	k: 1433	n:4570000
SOLH   4570000 perm   8250 sec   (554 perm/sec)   p_kst 3.135667e-04   p_cons 8.755011e-01   p_joint 4.525164e-04

Joint ci ratio: 8.603567e-02	ci left: 4.335613e-04	ci right 4.727516e-04	k: 2074	n:4580000
Cons ci ratio: 6.907280e-04	ci left: 8.751988e-01	ci right 8.758038e-01	k: 4009797	n:4580000
KS ci ratio: 1.033566e-01	ci left: 2.977433e-04	ci right 3.304047e-04	k: 1437	n:4580000
SOLH   4580000 perm   8282 sec   (553 perm/sec)   p_kst 3.137555e-04   p_cons 8.755015e-01   p_joint 4.528384e-04

Joint ci ratio: 8.599427e-02	ci left: 4.330431e-04	ci right 4.721668e-04	k: 2076	n:4590000
Cons ci ratio: 6.899945e-04	ci left: 8.751930e-01	ci right 8.757973e-01	k: 4018524	n:4590000
KS ci ratio: 1.032849e-01	ci left: 2.975191e-04	ci right 3.301319e-04	k: 1439	n:4590000
SOLH   4590000 perm   8316 sec   (552 perm/sec)   p_kst 3.135076e-04   p_cons 8.754954e-01   p_joint 4.522876e-04

Joint ci ratio: 8.591158e-02	ci left: 4.329525e-04	ci right 4.720286e-04	k: 2080	n:4600000
Cons ci ratio: 6.892502e-04	ci left: 8.751914e-01	ci right 8.757951e-01	k: 4027270	n:4600000
KS ci ratio: 1.031417e-01	ci left: 2.977195e-04	ci right 3.303062e-04	k: 1443	n:4600000
SOLH   4600000 perm   8350 sec   (551 perm/sec)   p_kst 3.136957e-04   p_cons 8.754935e-01   p_joint 4.521739e-04

Joint ci ratio: 8.578799e-02	ci left: 4.332870e-04	ci right 4.723341e-04	k: 2086	n:4610000
Cons ci ratio: 6.885152e-04	ci left: 8.751876e-01	ci right 8.757906e-01	k: 4036006	n:4610000
KS ci ratio: 1.029991e-01	ci left: 2.979190e-04	ci right 3.304798e-04	k: 1447	n:4610000
SOLH   4610000 perm   8385 sec   (550 perm/sec)   p_kst 3.138829e-04   p_cons 8.754894e-01   p_joint 4.524946e-04

Joint ci ratio: 8.570590e-02	ci left: 4.331964e-04	ci right 4.721961e-04	k: 2090	n:4620000
Cons ci ratio: 6.878181e-04	ci left: 8.751726e-01	ci right 8.757750e-01	k: 4044690	n:4620000
KS ci ratio: 1.029281e-01	ci left: 2.976959e-04	ci right 3.302085e-04	k: 1449	n:4620000
SOLH   4620000 perm   8417 sec   (549 perm/sec)   p_kst 3.136364e-04   p_cons 8.754740e-01   p_joint 4.523810e-04

Joint ci ratio: 8.564449e-02	ci left: 4.328948e-04	ci right 4.718381e-04	k: 2093	n:4630000
Cons ci ratio: 6.870707e-04	ci left: 8.751743e-01	ci right 8.757760e-01	k: 4053451	n:4630000
KS ci ratio: 1.028926e-01	ci left: 2.972633e-04	ci right 3.297168e-04	k: 1450	n:4630000
SOLH   4630000 perm   8451 sec   (548 perm/sec)   p_kst 3.131749e-04   p_cons 8.754754e-01   p_joint 4.520518e-04

Joint ci ratio: 8.556282e-02	ci left: 4.328054e-04	ci right 4.717017e-04	k: 2097	n:4640000
Cons ci ratio: 6.863412e-04	ci left: 8.751710e-01	ci right 8.757721e-01	k: 4062189	n:4640000
KS ci ratio: 1.027864e-01	ci left: 2.972526e-04	ci right 3.296694e-04	k: 1453	n:4640000
SOLH   4640000 perm   8485 sec   (547 perm/sec)   p_kst 3.131466e-04   p_cons 8.754718e-01   p_joint 4.519397e-04

Joint ci ratio: 8.544072e-02	ci left: 4.331374e-04	ci right 4.720052e-04	k: 2103	n:4650000
Cons ci ratio: 6.856081e-04	ci left: 8.751697e-01	ci right 8.757701e-01	k: 4070936	n:4650000
KS ci ratio: 1.026453e-01	ci left: 2.974515e-04	ci right 3.298427e-04	k: 1457	n:4650000
SOLH   4650000 perm   8519 sec   (546 perm/sec)   p_kst 3.133333e-04   p_cons 8.754701e-01   p_joint 4.522581e-04

Joint ci ratio: 8.527871e-02	ci left: 4.338880e-04	ci right 4.727456e-04	k: 2111	n:4660000
Cons ci ratio: 6.849049e-04	ci left: 8.751595e-01	ci right 8.757593e-01	k: 4079642	n:4660000
KS ci ratio: 1.025048e-01	ci left: 2.976495e-04	ci right 3.300153e-04	k: 1461	n:4660000
SOLH   4660000 perm   8554 sec   (545 perm/sec)   p_kst 3.135193e-04   p_cons 8.754597e-01   p_joint 4.530043e-04

Joint ci ratio: 8.515782e-02	ci left: 4.342164e-04	ci right 4.730455e-04	k: 2117	n:4670000
Cons ci ratio: 6.841958e-04	ci left: 8.751520e-01	ci right 8.757512e-01	k: 4088360	n:4670000
KS ci ratio: 1.023649e-01	ci left: 2.978467e-04	ci right 3.301871e-04	k: 1465	n:4670000
SOLH   4670000 perm   8588 sec   (544 perm/sec)   p_kst 3.137045e-04   p_cons 8.754518e-01   p_joint 4.533191e-04

Joint ci ratio: 8.511767e-02	ci left: 4.337068e-04	ci right 4.724712e-04	k: 2119	n:4680000
Cons ci ratio: 6.834647e-04	ci left: 8.751522e-01	ci right 8.757507e-01	k: 4097114	n:4680000
KS ci ratio: 1.022951e-01	ci left: 2.976267e-04	ci right 3.299199e-04	k: 1467	n:4680000
SOLH   4680000 perm   8623 sec   (543 perm/sec)   p_kst 3.134615e-04   p_cons 8.754517e-01   p_joint 4.527778e-04

Joint ci ratio: 8.499746e-02	ci left: 4.340341e-04	ci right 4.727703e-04	k: 2125	n:4690000
Cons ci ratio: 6.827487e-04	ci left: 8.751484e-01	ci right 8.757463e-01	k: 4105849	n:4690000
KS ci ratio: 1.021213e-01	ci left: 2.980310e-04	ci right 3.303097e-04	k: 1472	n:4690000
SOLH   4690000 perm   8658 sec   (542 perm/sec)   p_kst 3.138593e-04   p_cons 8.754475e-01   p_joint 4.530917e-04

Joint ci ratio: 8.487776e-02	ci left: 4.343602e-04	ci right 4.730681e-04	k: 2131	n:4700000
Cons ci ratio: 6.820363e-04	ci left: 8.751441e-01	ci right 8.757414e-01	k: 4114582	n:4700000
KS ci ratio: 1.019829e-01	ci left: 2.982262e-04	ci right 3.304797e-04	k: 1476	n:4700000
SOLH   4700000 perm   8692 sec   (541 perm/sec)   p_kst 3.140426e-04   p_cons 8.754430e-01   p_joint 4.534043e-04

Joint ci ratio: 8.475856e-02	ci left: 4.346848e-04	ci right 4.733646e-04	k: 2137	n:4710000
Cons ci ratio: 6.813354e-04	ci left: 8.751369e-01	ci right 8.757336e-01	k: 4123301	n:4710000
KS ci ratio: 1.018107e-01	ci left: 2.986275e-04	ci right 3.308667e-04	k: 1481	n:4710000
SOLH   4710000 perm   8726 sec   (540 perm/sec)   p_kst 3.144374e-04   p_cons 8.754355e-01   p_joint 4.537155e-04

Joint ci ratio: 8.463987e-02	ci left: 4.350081e-04	ci right 4.736598e-04	k: 2143	n:4720000
Cons ci ratio: 6.806135e-04	ci left: 8.751371e-01	ci right 8.757332e-01	k: 4132055	n:4720000
KS ci ratio: 1.017421e-01	ci left: 2.984078e-04	ci right 3.306002e-04	k: 1483	n:4720000
SOLH   4720000 perm   8761 sec   (539 perm/sec)   p_kst 3.141949e-04   p_cons 8.754354e-01   p_joint 4.540254e-04

Joint ci ratio: 8.454134e-02	ci left: 4.351232e-04	ci right 4.737379e-04	k: 2148	n:4730000
Cons ci ratio: 6.798398e-04	ci left: 8.751547e-01	ci right 8.757501e-01	k: 4140891	n:4730000
KS ci ratio: 1.016394e-01	ci left: 2.983950e-04	ci right 3.305516e-04	k: 1486	n:4730000
SOLH   4730000 perm   8795 sec   (538 perm/sec)   p_kst 3.141649e-04   p_cons 8.754526e-01   p_joint 4.541226e-04

Joint ci ratio: 8.442356e-02	ci left: 4.354443e-04	ci right 4.740310e-04	k: 2154	n:4740000
Cons ci ratio: 6.791397e-04	ci left: 8.751494e-01	ci right 8.757442e-01	k: 4149619	n:4740000
KS ci ratio: 1.015030e-01	ci left: 2.985880e-04	ci right 3.307196e-04	k: 1490	n:4740000
SOLH   4740000 perm   8830 sec   (537 perm/sec)   p_kst 3.143460e-04   p_cons 8.754470e-01   p_joint 4.544304e-04

Joint ci ratio: 8.438443e-02	ci left: 4.349397e-04	ci right 4.734630e-04	k: 2156	n:4750000
Cons ci ratio: 6.784248e-04	ci left: 8.751497e-01	ci right 8.757438e-01	k: 4158373	n:4750000
KS ci ratio: 1.014690e-01	ci left: 2.981645e-04	ci right 3.302392e-04	k: 1491	n:4750000
SOLH   4750000 perm   8863 sec   (536 perm/sec)   p_kst 3.138947e-04   p_cons 8.754469e-01   p_joint 4.538947e-04

Joint ci ratio: 8.424782e-02	ci left: 4.354656e-04	ci right 4.739699e-04	k: 2163	n:4760000
Cons ci ratio: 6.777147e-04	ci left: 8.751490e-01	ci right 8.757425e-01	k: 4167123	n:4760000
KS ci ratio: 1.012994e-01	ci left: 2.985619e-04	ci right 3.306225e-04	k: 1496	n:4760000
SOLH   4760000 perm   8898 sec   (535 perm/sec)   p_kst 3.142857e-04   p_cons 8.754460e-01   p_joint 4.544118e-04

Joint ci ratio: 8.417007e-02	ci left: 4.353736e-04	ci right 4.738324e-04	k: 2167	n:4770000
Cons ci ratio: 6.769971e-04	ci left: 8.751516e-01	ci right 8.757444e-01	k: 4175888	n:4770000
KS ci ratio: 1.011643e-01	ci left: 2.987534e-04	ci right 3.307891e-04	k: 1500	n:4770000
SOLH   4770000 perm   8933 sec   (534 perm/sec)   p_kst 3.144654e-04   p_cons 8.754482e-01   p_joint 4.542977e-04

Joint ci ratio: 8.413129e-02	ci left: 4.348723e-04	ci right 4.732684e-04	k: 2169	n:4780000
Cons ci ratio: 6.762921e-04	ci left: 8.751507e-01	ci right 8.757430e-01	k: 4184637	n:4780000
KS ci ratio: 1.011307e-01	ci left: 2.983323e-04	ci right 3.303116e-04	k: 1501	n:4780000
SOLH   4780000 perm   8968 sec   (533 perm/sec)   p_kst 3.140167e-04   p_cons 8.754471e-01   p_joint 4.537657e-04

Joint ci ratio: 8.403453e-02	ci left: 4.349864e-04	ci right 4.733461e-04	k: 2174	n:4790000
Cons ci ratio: 6.755602e-04	ci left: 8.751593e-01	ci right 8.757509e-01	k: 4193431	n:4790000
KS ci ratio: 1.009963e-01	ci left: 2.985234e-04	ci right 3.304782e-04	k: 1505	n:4790000
SOLH   4790000 perm   9003 sec   (532 perm/sec)   p_kst 3.141962e-04   p_cons 8.754553e-01   p_joint 4.538622e-04

Joint ci ratio: 8.391885e-02	ci left: 4.353039e-04	ci right 4.736362e-04	k: 2180	n:4800000
Cons ci ratio: 6.748107e-04	ci left: 8.751743e-01	ci right 8.757653e-01	k: 4202256	n:4800000
KS ci ratio: 1.008624e-01	ci left: 2.987138e-04	ci right 3.306441e-04	k: 1509	n:4800000
SOLH   4800000 perm   9038 sec   (531 perm/sec)   p_kst 3.143750e-04   p_cons 8.754700e-01   p_joint 4.541667e-04

Joint ci ratio: 8.380364e-02	ci left: 4.356201e-04	ci right 4.739251e-04	k: 2186	n:4810000
Cons ci ratio: 6.741068e-04	ci left: 8.751753e-01	ci right 8.757656e-01	k: 4211014	n:4810000
KS ci ratio: 1.007623e-01	ci left: 2.987007e-04	ci right 3.305961e-04	k: 1512	n:4810000
SOLH   4810000 perm   9073 sec   (530 perm/sec)   p_kst 3.143451e-04   p_cons 8.754707e-01   p_joint 4.544699e-04

Joint ci ratio: 8.376537e-02	ci left: 4.351226e-04	ci right 4.733655e-04	k: 2188	n:4820000
Cons ci ratio: 6.734294e-04	ci left: 8.751684e-01	ci right 8.757581e-01	k: 4219734	n:4820000
KS ci ratio: 1.006958e-01	ci left: 2.984855e-04	ci right 3.303356e-04	k: 1514	n:4820000
SOLH   4820000 perm   9108 sec   (529 perm/sec)   p_kst 3.141079e-04   p_cons 8.754635e-01   p_joint 4.539419e-04

Joint ci ratio: 8.372715e-02	ci left: 4.346271e-04	ci right 4.728082e-04	k: 2190	n:4830000
Cons ci ratio: 6.727240e-04	ci left: 8.751712e-01	ci right 8.757604e-01	k: 4228501	n:4830000
KS ci ratio: 1.006626e-01	ci left: 2.980693e-04	ci right 3.298639e-04	k: 1515	n:4830000
SOLH   4830000 perm   9143 sec   (528 perm/sec)   p_kst 3.136646e-04   p_cons 8.754660e-01   p_joint 4.534161e-04

Joint ci ratio: 8.365083e-02	ci left: 4.345383e-04	ci right 4.726750e-04	k: 2194	n:4840000
Cons ci ratio: 6.720342e-04	ci left: 8.751698e-01	ci right 8.757583e-01	k: 4237247	n:4840000
KS ci ratio: 1.005632e-01	ci left: 2.980577e-04	ci right 3.298178e-04	k: 1518	n:4840000
SOLH   4840000 perm   9178 sec   (527 perm/sec)   p_kst 3.136364e-04   p_cons 8.754643e-01   p_joint 4.533058e-04

Joint ci ratio: 8.359374e-02	ci left: 4.342479e-04	ci right 4.723319e-04	k: 2197	n:4850000
Cons ci ratio: 6.713325e-04	ci left: 8.751728e-01	ci right 8.757607e-01	k: 4246015	n:4850000
KS ci ratio: 1.004970e-01	ci left: 2.978452e-04	ci right 3.295605e-04	k: 1520	n:4850000
SOLH   4850000 perm   9214 sec   (526 perm/sec)   p_kst 3.134021e-04   p_cons 8.754670e-01   p_joint 4.529897e-04

Joint ci ratio: 8.340418e-02	ci left: 4.353691e-04	ci right 4.734606e-04	k: 2207	n:4860000
Cons ci ratio: 6.706609e-04	ci left: 8.751668e-01	ci right 8.757541e-01	k: 4254739	n:4860000
KS ci ratio: 1.003323e-01	ci left: 2.982353e-04	ci right 3.299370e-04	k: 1525	n:4860000
SOLH   4860000 perm   9255 sec   (525 perm/sec)   p_kst 3.137860e-04   p_cons 8.754607e-01   p_joint 4.541152e-04

Joint ci ratio: 8.329108e-02	ci left: 4.356815e-04	ci right 4.737461e-04	k: 2213	n:4870000
Cons ci ratio: 6.699951e-04	ci left: 8.751596e-01	ci right 8.757463e-01	k: 4263457	n:4870000
KS ci ratio: 1.001683e-01	ci left: 2.986239e-04	ci right 3.303119e-04	k: 1530	n:4870000
SOLH   4870000 perm   9290 sec   (524 perm/sec)   p_kst 3.141684e-04   p_cons 8.754532e-01   p_joint 4.544148e-04

Joint ci ratio: 8.314097e-02	ci left: 4.363939e-04	ci right 4.744488e-04	k: 2221	n:4880000
Cons ci ratio: 6.693237e-04	ci left: 8.751549e-01	ci right 8.757410e-01	k: 4272187	n:4880000
KS ci ratio: 1.000051e-01	ci left: 2.990109e-04	ci right 3.306853e-04	k: 1535	n:4880000
SOLH   4880000 perm   9326 sec   (523 perm/sec)   p_kst 3.145492e-04   p_cons 8.754482e-01   p_joint 4.551230e-04

Joint ci ratio: 8.304758e-02	ci left: 4.365027e-04	ci right 4.745223e-04	k: 2226	n:4890000
Cons ci ratio: 6.686411e-04	ci left: 8.751544e-01	ci right 8.757400e-01	k: 4280938	n:4890000
KS ci ratio: 9.994005e-02	ci left: 2.987982e-04	ci right 3.304283e-04	k: 1537	n:4890000
SOLH   4890000 perm   9362 sec   (522 perm/sec)   p_kst 3.143149e-04   p_cons 8.754474e-01   p_joint 4.552147e-04

Outputting figure to mutsig2_images.part000000000164/SOLH.2_3305_4890000_0.00031431_0.87545_0.00045521.png
                gene_name: SOLH
               theta_stop: 0.100 
                    nperm: 4890000 
                     p_ks: 0.00031 
        ci_ks_bounds_left: 0.00030 
       ci_ks_bounds_right: 0.00033 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.88 
                  p_joint: 0.00046 
     ci_joint_bounds_left: 0.00044 
    ci_joint_bounds_right: 0.00047 

Current progress: 33 percent done.
SP140L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.588080e-02	ci left: 3.204868e-01	ci right 3.390125e-01	k: 3297	n:10000
Cons ci ratio: 8.496310e-02	ci left: 1.679914e-01	ci right 1.829981e-01	k: 1754	n:10000
KS ci ratio: 2.411746e-02	ci left: 7.165376e-01	ci right 7.341309e-01	k: 7254	n:10000
SP140L   10000 perm   2 sec   (6263 perm/sec)   p_kst 7.254000e-01   p_cons 1.754000e-01   p_joint 3.297000e-01

Outputting figure to mutsig2_images.part000000000164/SP140L.2_1819_10000_0.7254_0.1754_0.3297.png
                gene_name: SP140L
               theta_stop: 0.085 
                    nperm: 10000 
                     p_ks: 0.73 
        ci_ks_bounds_left: 0.72 
       ci_ks_bounds_right: 0.73 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.17 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.33 
     ci_joint_bounds_left: 0.32 
    ci_joint_bounds_right: 0.34 

Current progress: 67 percent done.
SP4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.488330e-02	ci left: 2.586449e-01	ci right 2.760908e-01	k: 2673	n:10000
Cons ci ratio: 4.405475e-02	ci left: 4.320349e-01	ci right 4.515990e-01	k: 4418	n:10000
KS ci ratio: 6.935644e-02	ci left: 2.336317e-01	ci right 2.505188e-01	k: 2420	n:10000
SP4   10000 perm   2 sec   (6454 perm/sec)   p_kst 2.420000e-01   p_cons 4.418000e-01   p_joint 2.673000e-01

Outputting figure to mutsig2_images.part000000000164/SP4.2_2379_10000_0.242_0.4418_0.2673.png
                gene_name: SP4
               theta_stop: 0.069 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.44 
      ci_cons_bounds_left: 0.43 
     ci_cons_bounds_right: 0.45 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.26 
    ci_joint_bounds_right: 0.28 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000164
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 164 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1427>
Subject: Job 8704362: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1427>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000165> was used as the working directory.
Started at Thu Nov 15 19:36:50 2012
Results reported at Thu Nov 15 19:39:51 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000165.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000165.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 165  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000165.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    211.90 sec.
    Max Memory :      5474 MB
    Max Swap   :      8349 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
165
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 165
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 165: processing genes 14837 - 14927
Calculating significance of each gene.
Using projection method.
14837	SP8	1
14838	SPA17	1
14839	SPACA1	1
14840	SPACA3	1
14841	SPACA4	1
14842	SPAG1	1
14843	SPAG11A	4.092043e-03
14844	SPAG11B	1
14845	SPAG16	1
14846	SPAG17	2.576543e-01
14847	SPAG4	1
14848	SPAG5	1
14849	SPAG6	1
14850	SPAG7	1
14851	SPAG8	1
14852	SPAG9	4.664730e-01
14853	SPAM1	1.707626e-01
14854	SPANXC	1
14855	SPANXD	1
14856	SPANXE	1
14857	SPANXN1	1
14858	SPANXN2	1
14859	SPANXN3	1
14860	SPANXN5	1
14861	SPARC	1
14862	SPARCL1	2.543481e-01
14863	SPAST	1
14864	SPATA1	1
14865	SPATA12	1
14866	SPATA13	1
14867	SPATA16	1
14868	SPATA17	1
14869	SPATA18	1.707429e-01
14870	SPATA19	1
14871	SPATA2	1
14872	SPATA20	1
14873	SPATA21	1
14874	SPATA22	1
14875	SPATA2L	1
14876	SPATA4	1
14877	SPATA5	1
14878	SPATA5L1	2.327644e-01
14879	SPATA6	1
14880	SPATA7	1
14881	SPATA8	4.366628e-02
14882	SPATA9	1
14883	SPATC1	1
14884	SPATS1	1.265561e-02
14885	SPATS2	1
14886	SPATS2L	1
14887	SPC24	1
14888	SPC25	2.845790e-02
14889	SPCS1	1
14890	SPCS2	1
14891	SPCS3	1
14892	SPDEF	1
14893	SPDYA	1.381746e-01
14894	SPDYC	1
14895	SPDYE1	1
14896	SPDYE3	1
14897	SPDYE4	1
14898	SPDYE5	7.410806e-02
14899	SPDYE6	1
14900	SPEF1	1
14901	SPEF2	1
14902	SPEG	1
14903	SPEM1	1
14904	SPEN	1
14905	SPERT	1
14906	SPESP1	1
14907	SPG11	1
14908	SPG20	8.364283e-02
14909	SPG21	1
14910	SPG7	1
14911	SPHAR	1
14912	SPHK1	1
14913	SPHK2	1
14914	SPHKAP	3.398694e-01
14915	SPI1	1
14916	SPIB	3.703205e-02
14917	SPIC	1
14918	SPIN1	1
14919	SPIN2A	1
14920	SPIN2B	1
14921	SPIN3	1
14922	SPIN4	1
14923	SPINK1	1
14924	SPINK13	1
14925	SPINK14	1
14926	SPINK2	1
14927	SPINK4	1
Done

Running MutSig 2:
Scatter job 165: processing genes 14837 - 14927
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SPAG17
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.749872e-02	ci left: 5.122545e-01	ci right 5.319326e-01	k: 5221	n:10000
Cons ci ratio: 4.124628e-02	ci left: 4.646716e-01	ci right 4.843433e-01	k: 4745	n:10000
KS ci ratio: 2.035121e-02	ci left: 7.795518e-01	ci right 7.956803e-01	k: 7877	n:10000
SPAG17   10000 perm   3 sec   (3431 perm/sec)   p_kst 7.877000e-01   p_cons 4.745000e-01   p_joint 5.221000e-01

Outputting figure to mutsig2_images.part000000000165/SPAG17.2_6864_10000_0.7877_0.4745_0.5221.png
                gene_name: SPAG17
               theta_stop: 0.041 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.47 
      ci_cons_bounds_left: 0.46 
     ci_cons_bounds_right: 0.48 
                  p_joint: 0.52 
     ci_joint_bounds_left: 0.51 
    ci_joint_bounds_right: 0.53 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000165
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 165 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1709>
Subject: Job 8704364: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1709>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000166> was used as the working directory.
Started at Thu Nov 15 19:36:50 2012
Results reported at Thu Nov 15 19:39:28 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000166.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000166.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 166  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000166.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    171.01 sec.
    Max Memory :      5666 MB
    Max Swap   :      8402 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
166
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 166
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 166: processing genes 14928 - 15017
Calculating significance of each gene.
Using projection method.
14928	SPINK5	1
14929	SPINK6	1
14930	SPINK7	1
14931	SPINK8	1
14932	SPINK9	2.035312e-03
14933	SPINLW1	1
14934	SPINT1	1
14935	SPINT2	1
14936	SPINT4	1
14937	SPIRE1	1
14938	SPIRE2	1
14939	SPN	1
14940	SPNS1	1.930916e-01
14941	SPNS2	1
14942	SPNS3	1
14943	SPO11	1
14944	SPOCD1	1
14945	SPOCK1	1
14946	SPOCK2	1
14947	SPOCK3	4.759844e-02
14948	SPON1	1
14949	SPON2	1.419470e-01
14950	SPOP	1.225536e-01
14951	SPOPL	1
14952	SPP1	1
14953	SPP2	1
14954	SPPL2A	1
14955	SPPL2B	1
14956	SPPL3	1
14957	SPR	5.919860e-02
14958	SPRED1	1
14959	SPRED2	1.171827e-01
14960	SPRED3	1
14961	SPRR1A	1
14962	SPRR1B	1
14963	SPRR2A	1
14964	SPRR2B	1
14965	SPRR2D	1
14966	SPRR2E	1
14967	SPRR2F	1
14968	SPRR2G	1
14969	SPRR3	1
14970	SPRR4	1
14971	SPRY1	1
14972	SPRY2	1
14973	SPRY3	1
14974	SPRY4	1
14975	SPRYD3	1
14976	SPRYD4	1
14977	SPRYD5	1
14978	SPSB1	1
14979	SPSB2	1
14980	SPSB3	1
14981	SPSB4	1
In gene SPTA1 the following bins exceed PROBCAP:
    THCA-EL-A3GR-TP	categ 6	N = 7468    n = 1	mu =   9.98e-08
14982	SPTA1	1.770487e-02
14983	SPTAN1	4.666560e-01
14984	SPTB	5.004635e-01
14985	SPTBN1	4.799231e-01
14986	SPTBN2	1
14987	SPTBN4	1.431327e-01
14988	SPTBN5	6.145420e-01
14989	SPTLC1	1
14990	SPTLC2	1
14991	SPTLC3	1
14992	SPTY2D1	2.598319e-01
14993	SPZ1	9.302927e-04
In gene SQLE the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 1496    n = 1	mu =   2.41e-07
14994	SQLE	1.723886e-01
14995	SQRDL	1
14996	SQSTM1	1
14997	SR140	1
14998	SRA1	1
14999	SRBD1	1
15000/18093 15000	SRC	1.849091e-01
15001	SRCAP	2.307292e-01
15002	SRCIN1	1
15003	SRCRB4D	1
15004	SRD5A1	1
15005	SRD5A2	1
15006	SRD5A3	1
15007	SREBF1	2.537003e-01
15008	SREBF2	3.622592e-01
15009	SRF	1
15010	SRFBP1	1
15011	SRGAP1	1
15012	SRGAP2	1
15013	SRGAP3	2.703195e-01
15014	SRGN	1
15015	SRI	1
15016	SRL	1
15017	SRM	1
Done

Running MutSig 2:
Scatter job 166: processing genes 14928 - 15017
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SPTA1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.724923e-02	ci left: 3.979471e-01	ci right 4.173068e-01	k: 4076	n:10000
Cons ci ratio: 5.791351e-02	ci left: 3.050079e-01	ci right 3.233005e-01	k: 3141	n:10000
KS ci ratio: 4.240530e-02	ci left: 4.508931e-01	ci right 4.705298e-01	k: 4607	n:10000
SPTA1   10000 perm   2 sec   (4106 perm/sec)   p_kst 4.607000e-01   p_cons 3.141000e-01   p_joint 4.076000e-01

Outputting figure to mutsig2_images.part000000000166/SPTA1.4_7468_10000_0.4607_0.3141_0.4076.png
                gene_name: SPTA1
               theta_stop: 0.058 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.32 
                  p_joint: 0.41 
     ci_joint_bounds_left: 0.40 
    ci_joint_bounds_right: 0.42 

Current progress: 25 percent done.
SPZ1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.530342e-02	ci left: 2.051084e-01	ci right 2.212590e-01	k: 2131	n:10000
Cons ci ratio: 3.949308e-02	ci left: 4.863528e-01	ci right 5.060494e-01	k: 4962	n:10000
KS ci ratio: 2.177074e-01	ci left: 2.797424e-02	ci right 3.490226e-02	k: 313	n:10000
SPZ1   10000 perm   1 sec   (6699 perm/sec)   p_kst 3.130000e-02   p_cons 4.962000e-01   p_joint 2.131000e-01

Joint ci ratio: 9.231348e-02	ci left: 7.886975e-02	ci right 8.655209e-02	k: 1653	n:20000
Cons ci ratio: 2.776088e-02	ci left: 4.922460e-01	ci right 5.061542e-01	k: 9984	n:20000
KS ci ratio: 1.523258e-01	ci left: 2.960404e-02	ci right 3.453324e-02	k: 640	n:20000
SPZ1   20000 perm   3 sec   (5865 perm/sec)   p_kst 3.200000e-02   p_cons 4.992000e-01   p_joint 8.265000e-02

Joint ci ratio: 7.491425e-02	ci left: 8.049168e-02	ci right 8.678923e-02	k: 2508	n:30000
Cons ci ratio: 2.253766e-02	ci left: 4.963921e-01	ci right 5.077408e-01	k: 15062	n:30000
KS ci ratio: 1.257663e-01	ci left: 2.939074e-02	ci right 3.336736e-02	k: 940	n:30000
SPZ1   30000 perm   5 sec   (5556 perm/sec)   p_kst 3.133333e-02   p_cons 5.020667e-01   p_joint 8.360000e-02

Joint ci ratio: 6.045034e-02	ci left: 9.224216e-02	ci right 9.801677e-02	k: 3804	n:40000
Cons ci ratio: 1.948203e-02	ci left: 4.980876e-01	ci right 5.079120e-01	k: 20120	n:40000
KS ci ratio: 1.074093e-01	ci left: 3.049156e-02	ci right 3.397679e-02	k: 1288	n:40000
SPZ1   40000 perm   7 sec   (5370 perm/sec)   p_kst 3.220000e-02   p_cons 5.030000e-01   p_joint 9.510000e-02

Joint ci ratio: 4.568678e-02	ci left: 1.254001e-01	ci right 1.312831e-01	k: 6416	n:50000
Cons ci ratio: 1.843791e-02	ci left: 4.703945e-01	ci right 4.791684e-01	k: 23739	n:50000
KS ci ratio: 9.528604e-02	ci left: 3.117782e-02	ci right 3.431674e-02	k: 1636	n:50000
SPZ1   50000 perm   10 sec   (5223 perm/sec)   p_kst 3.272000e-02   p_cons 4.747800e-01   p_joint 1.283200e-01

Outputting figure to mutsig2_images.part000000000166/SPZ1.3_1297_50000_0.03272_0.47478_0.12832.png
                gene_name: SPZ1
               theta_stop: 0.095 
                    nperm: 50000 
                     p_ks: 0.033 
        ci_ks_bounds_left: 0.031 
       ci_ks_bounds_right: 0.034 
                   p_cons: 0.47 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.48 
                  p_joint: 0.13 
     ci_joint_bounds_left: 0.13 
    ci_joint_bounds_right: 0.13 

Current progress: 50 percent done.
SRCAP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.503973e-02	ci left: 5.459963e-01	ci right 5.655712e-01	k: 5558	n:10000
Cons ci ratio: 5.332702e-02	ci left: 3.413419e-01	ci right 3.601452e-01	k: 3507	n:10000
KS ci ratio: 2.639009e-02	ci left: 6.789163e-01	ci right 6.971741e-01	k: 6881	n:10000
SRCAP   10000 perm   3 sec   (3846 perm/sec)   p_kst 6.881000e-01   p_cons 3.507000e-01   p_joint 5.558000e-01

Outputting figure to mutsig2_images.part000000000166/SRCAP.3_9821_10000_0.6881_0.3507_0.5558.png
                gene_name: SRCAP
               theta_stop: 0.053 
                    nperm: 10000 
                     p_ks: 0.69 
        ci_ks_bounds_left: 0.68 
       ci_ks_bounds_right: 0.70 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 0.56 
     ci_joint_bounds_left: 0.55 
    ci_joint_bounds_right: 0.57 

Current progress: 75 percent done.
SPTBN4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.900626e-02	ci left: 2.970746e-01	ci right 3.152384e-01	k: 3061	n:10000
Cons ci ratio: 4.812099e-02	ci left: 3.891836e-01	ci right 4.084753e-01	k: 3988	n:10000
KS ci ratio: 7.446075e-02	ci left: 2.088557e-01	ci right 2.251095e-01	k: 2169	n:10000
SPTBN4   10000 perm   2 sec   (4319 perm/sec)   p_kst 2.169000e-01   p_cons 3.988000e-01   p_joint 3.061000e-01

Outputting figure to mutsig2_images.part000000000166/SPTBN4.2_7929_10000_0.2169_0.3988_0.3061.png
                gene_name: SPTBN4
               theta_stop: 0.074 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.40 
      ci_cons_bounds_left: 0.39 
     ci_cons_bounds_right: 0.41 
                  p_joint: 0.31 
     ci_joint_bounds_left: 0.30 
    ci_joint_bounds_right: 0.32 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000166
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 166 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1710>
Subject: Job 8704373: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1710>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000167> was used as the working directory.
Started at Thu Nov 15 19:36:50 2012
Results reported at Thu Nov 15 19:39:41 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000167.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000167.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 167  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000167.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    193.82 sec.
    Max Memory :      5733 MB
    Max Swap   :      8527 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
167
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 167
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 167: processing genes 15018 - 15108
Calculating significance of each gene.
Using projection method.
15018	SRMS	1
15019	SRP14	1
15020	SRP19	1
15021	SRP54	1
15022	SRP68	2.762916e-01
15023	SRP72	7.259511e-02
15024	SRP9	1
15025	SRPK1	1
15026	SRPK2	1
15027	SRPK3	1
15028	SRPR	2.592539e-01
15029	SRPRB	1
15030	SRPX	1
15031	SRPX2	1.377516e-01
15032	SRR	5.130923e-02
15033	SRRD	1
15034	SRRM1	1
15035	SRRM2	5.603797e-01
15036	SRRM3	1
15037	SRRM4	1
In gene SRRT the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 2707    n = 1	mu =   1.33e-07
15038	SRRT	6.215419e-02
15039	SRXN1	1
15040	SS18	1
15041	SS18L1	1
15042	SS18L2	1
15043	SSB	1
15044	SSBP1	1
15045	SSBP2	1
15046	SSBP3	1
15047	SSBP4	1
15048	SSFA2	3.783802e-01
15049	SSH1	1
15050	SSH2	1
15051	SSH3	1
15052	SSNA1	1
15053	SSPN	1
In gene SSPO the following bins exceed PROBCAP:
    THCA-EL-A3TA-TP	categ 6	N = 10589   n = 1	mu =   1.04e-07
15054	SSPO	6.488516e-01
15055	SSR1	1
15056	SSR2	1
15057	SSR3	1
15058	SSR4	1
15059	SSRP1	1
15060	SSSCA1	1
15061	SST	1
15062	SSTR1	1
15063	SSTR2	9.685109e-02
15064	SSTR3	1
15065	SSTR4	1
15066	SSTR5	1
15067	SSU72	1
15068	SSX1	1
15069	SSX2IP	1
15070	SSX3	1
15071	SSX5	1
15072	SSX7	1
15073	ST13	1.259850e-03
15074	ST14	1
15075	ST18	1
15076	ST20	1
15077	ST3GAL1	1
15078	ST3GAL2	1
15079	ST3GAL3	1
15080	ST3GAL4	1
15081	ST3GAL5	1
15082	ST3GAL6	1
15083	ST5	1
15084	ST6GAL1	1
15085	ST6GAL2	1
15086	ST6GALNAC1	1
15087	ST6GALNAC2	1
15088	ST6GALNAC3	1
15089	ST6GALNAC4	1
15090	ST6GALNAC5	1
15091	ST6GALNAC6	1.051301e-01
15092	ST7	1
15093	ST7L	1
15094	ST8SIA1	1.053977e-01
15095	ST8SIA2	1
15096	ST8SIA3	1
15097	ST8SIA4	1
15098	ST8SIA5	1
15099	ST8SIA6	1
15100	STAB1	3.082299e-01
15101	STAB2	1.283948e-01
15102	STAC	1
15103	STAC2	9.179036e-02
15104	STAC3	1.299185e-01
15105	STAG1	3.385670e-01
15106	STAG2	3.468479e-01
15107	STAG3	2.025783e-01
15108	STAG3L2	1
Done

Running MutSig 2:
Scatter job 167: processing genes 15018 - 15108
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
STAB2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.692637e-01	ci left: 4.657748e-02	ci right 5.528648e-02	k: 508	n:10000
Cons ci ratio: 2.403906e-01	ci left: 2.278143e-02	ci right 2.909884e-02	k: 258	n:10000
KS ci ratio: 5.074812e-02	ci left: 3.641064e-01	ci right 3.831672e-01	k: 3736	n:10000
STAB2   10000 perm   3 sec   (3949 perm/sec)   p_kst 3.736000e-01   p_cons 2.580000e-02   p_joint 5.080000e-02

Joint ci ratio: 1.385177e-01	ci left: 3.582747e-02	ci right 4.120776e-02	k: 769	n:20000
Cons ci ratio: 1.743543e-01	ci left: 2.249752e-02	ci right 2.684217e-02	k: 492	n:20000
KS ci ratio: 3.615786e-02	ci left: 3.634027e-01	ci right 3.768351e-01	k: 7402	n:20000
STAB2   20000 perm   9 sec   (2280 perm/sec)   p_kst 3.701000e-01   p_cons 2.460000e-02   p_joint 3.845000e-02

Joint ci ratio: 9.254171e-02	ci left: 5.381590e-02	ci right 5.907041e-02	k: 1692	n:30000
Cons ci ratio: 1.394401e-01	ci left: 2.387437e-02	ci right 2.748495e-02	k: 769	n:30000
KS ci ratio: 2.896006e-02	ci left: 3.736385e-01	ci right 3.846516e-01	k: 11374	n:30000
STAB2   30000 perm   12 sec   (2554 perm/sec)   p_kst 3.791333e-01   p_cons 2.563333e-02   p_joint 5.640000e-02

Joint ci ratio: 1.023112e-01	ci left: 3.358602e-02	ci right 3.723183e-02	k: 1415	n:40000
Cons ci ratio: 1.213467e-01	ci left: 2.388016e-02	ci right 2.698926e-02	k: 1016	n:40000
KS ci ratio: 2.515175e-02	ci left: 3.730452e-01	ci right 3.825726e-01	k: 15112	n:40000
STAB2   40000 perm   15 sec   (2734 perm/sec)   p_kst 3.778000e-01   p_cons 2.540000e-02   p_joint 3.537500e-02

Joint ci ratio: 8.908593e-02	ci left: 3.561679e-02	ci right 3.895720e-02	k: 1863	n:50000
Cons ci ratio: 1.089878e-01	ci left: 2.384383e-02	ci right 2.661167e-02	k: 1260	n:50000
KS ci ratio: 2.242313e-02	ci left: 3.750840e-01	ci right 3.836100e-01	k: 18967	n:50000
STAB2   50000 perm   18 sec   (2826 perm/sec)   p_kst 3.793400e-01   p_cons 2.520000e-02   p_joint 3.726000e-02

Joint ci ratio: 8.100113e-02	ci left: 3.604294e-02	ci right 3.910200e-02	k: 2253	n:60000
Cons ci ratio: 1.003871e-01	ci left: 2.353782e-02	ci right 2.604177e-02	k: 1486	n:60000
KS ci ratio: 2.042428e-02	ci left: 3.764963e-01	ci right 3.842820e-01	k: 22823	n:60000
STAB2   60000 perm   21 sec   (2894 perm/sec)   p_kst 3.803833e-01   p_cons 2.476667e-02   p_joint 3.755000e-02

Joint ci ratio: 7.575409e-02	ci left: 3.544543e-02	ci right 3.825027e-02	k: 2578	n:70000
Cons ci ratio: 9.101751e-02	ci left: 2.463810e-02	ci right 2.700143e-02	k: 1806	n:70000
KS ci ratio: 1.891665e-02	ci left: 3.766018e-01	ci right 3.838081e-01	k: 26614	n:70000
STAB2   70000 perm   24 sec   (2927 perm/sec)   p_kst 3.802000e-01   p_cons 2.580000e-02   p_joint 3.682857e-02

Outputting figure to mutsig2_images.part000000000167/STAB2.3_7932_70000_0.3802_0.0258_0.036829.png
                gene_name: STAB2
               theta_stop: 0.091 
                    nperm: 70000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.38 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.026 
      ci_cons_bounds_left: 0.025 
     ci_cons_bounds_right: 0.027 
                  p_joint: 0.037 
     ci_joint_bounds_left: 0.035 
    ci_joint_bounds_right: 0.038 

Current progress: 25 percent done.
SRRT
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.519609e-02	ci left: 5.437922e-01	ci right 5.633765e-01	k: 5536	n:10000
Cons ci ratio: 7.041197e-02	ci left: 2.281991e-01	ci right 2.449546e-01	k: 2365	n:10000
KS ci ratio: 3.734125e-02	ci left: 5.143558e-01	ci right 5.340301e-01	k: 5242	n:10000
SRRT   10000 perm   2 sec   (5494 perm/sec)   p_kst 5.242000e-01   p_cons 2.365000e-01   p_joint 5.536000e-01

Outputting figure to mutsig2_images.part000000000167/SRRT.2_2707_10000_0.5242_0.2365_0.5536.png
                gene_name: SRRT
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.52 
        ci_ks_bounds_left: 0.51 
       ci_ks_bounds_right: 0.53 
                   p_cons: 0.24 
      ci_cons_bounds_left: 0.23 
     ci_cons_bounds_right: 0.24 
                  p_joint: 0.55 
     ci_joint_bounds_left: 0.54 
    ci_joint_bounds_right: 0.56 

Current progress: 50 percent done.
ST13
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.512887e-02	ci left: 8.636592e-01	ci right 8.769242e-01	k: 8704	n:10000
Cons ci ratio: 2.483577e-03	ci left: 9.946724e-01	ci right 9.972253e-01	k: 9961	n:10000
KS ci ratio: 7.287598e-02	ci left: 2.161558e-01	ci right 2.326051e-01	k: 2243	n:10000
ST13   10000 perm   1 sec   (6814 perm/sec)   p_kst 2.243000e-01   p_cons 9.961000e-01   p_joint 8.704000e-01

Outputting figure to mutsig2_images.part000000000167/ST13.2_1158_10000_0.2243_0.9961_0.8704.png
                gene_name: ST13
               theta_stop: 0.073 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.22 
       ci_ks_bounds_right: 0.23 
                   p_cons: 1.00 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.87 
     ci_joint_bounds_left: 0.86 
    ci_joint_bounds_right: 0.88 

Current progress: 75 percent done.
STAB1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.153682e-02	ci left: 4.611763e-01	ci right 4.808406e-01	k: 4710	n:10000
KS ci ratio: 4.614221e-02	ci left: 4.094040e-01	ci right 4.288431e-01	k: 4191	n:10000
STAB1   10000 perm   2 sec   (4262 perm/sec)   p_kst 4.191000e-01   p_cons 4.710000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000167/STAB1.2_7989_10000_0.4191_0.471_1.png
                gene_name: STAB1
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.42 
        ci_ks_bounds_left: 0.41 
       ci_ks_bounds_right: 0.43 
                   p_cons: 0.47 
      ci_cons_bounds_left: 0.46 
     ci_cons_bounds_right: 0.48 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000167
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 167 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1537>
Subject: Job 8704375: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1537>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000168> was used as the working directory.
Started at Thu Nov 15 19:36:57 2012
Results reported at Thu Nov 15 19:40:12 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000168.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000168.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 168  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000168.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    270.52 sec.
    Max Memory :      5694 MB
    Max Swap   :      8430 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
168
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 168
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 168: processing genes 15109 - 15198
Calculating significance of each gene.
Using projection method.
15109	STAG3L4	1
15110	STAM	1
15111	STAM2	2.164143e-01
15112	STAMBP	1
15113	STAMBPL1	1
15114	STAP1	1
15115	STAP2	1
15116	STAR	1
15117	STARD10	1
15118	STARD13	1
15119	STARD3	1
15120	STARD3NL	1
15121	STARD4	1
15122	STARD5	1
15123	STARD6	1
15124	STARD7	1
15125	STARD8	1
15126	STAT1	2.281674e-01
15127	STAT2	3.015355e-01
15128	STAT3	1
15129	STAT4	1.910237e-01
15130	STAT5A	1
15131	STAT5B	2.064710e-01
15132	STAT6	3.355818e-01
15133	STATH	1
15134	STAU1	1
15135	STAU2	1
15136	STBD1	1
15137	STC1	1
15138	STC2	4.203543e-03
15139	STEAP1	1
15140	STEAP2	1.883881e-01
15141	STEAP3	1
15142	STEAP4	1
15143	STH	1
15144	STIL	1
15145	STIM1	1
15146	STIM2	1
15147	STIP1	1
15148	STK10	1
15149	STK11	1
15150	STK11IP	1
15151	STK16	1
15152	STK17A	1
15153	STK17B	1
15154	STK19	1.355565e-01
15155	STK24	1
15156	STK25	1.260019e-01
15157	STK3	1
15158	STK31	5.836354e-02
15159	STK32A	1
15160	STK32B	1.513721e-02
15161	STK32C	1
15162	STK33	1
15163	STK35	1
15164	STK36	1
15165	STK38	1
15166	STK38L	1
15167	STK39	1.400767e-01
15168	STK4	1
15169	STK40	1
15170	STMN1	1
15171	STMN2	1
15172	STMN3	1
15173	STMN4	1
15174	STOM	1
15175	STOML1	1.431335e-01
15176	STOML2	1.596392e-01
15177	STOML3	1
15178	STON1	1
15179	STON1-GTF2A1L	1
15180	STON2	1
15181	STOX1	1
15182	STOX2	1
15183	STRA13	1
15184	STRA6	2.582452e-01
15185	STRA8	1
15186	STRADA	1
15187	STRADB	1
15188	STRAP	1
15189	STRBP	1
15190	STRC	1
15191	STRN	1
15192	STRN3	1
15193	STRN4	1
15194	STS	1.562483e-01
15195	STT3A	2.300434e-02
15196	STT3B	1.049044e-01
15197	STUB1	1.176945e-01
15198	STX10	1
Done

Running MutSig 2:
Scatter job 168: processing genes 15109 - 15198
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
STC2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.413621e-01	ci left: 6.633192e-02	ci right 7.651945e-02	k: 713	n:10000
Cons ci ratio: 1.775008e-01	ci left: 4.235985e-02	ci right 5.070688e-02	k: 464	n:10000
KS ci ratio: 5.370375e-02	ci left: 3.381626e-01	ci right 3.569262e-01	k: 3475	n:10000
STC2   10000 perm   2 sec   (5799 perm/sec)   p_kst 3.475000e-01   p_cons 4.640000e-02   p_joint 7.130000e-02

Joint ci ratio: 8.965107e-02	ci left: 8.332519e-02	ci right 9.119529e-02	k: 1744	n:20000
Cons ci ratio: 1.260130e-01	ci left: 4.323490e-02	ci right 4.909795e-02	k: 922	n:20000
KS ci ratio: 3.807911e-02	ci left: 3.397037e-01	ci right 3.529410e-01	k: 6926	n:20000
STC2   20000 perm   7 sec   (2946 perm/sec)   p_kst 3.463000e-01   p_cons 4.610000e-02   p_joint 8.720000e-02

Joint ci ratio: 9.011304e-02	ci left: 5.665347e-02	ci right 6.203226e-02	k: 1779	n:30000
Cons ci ratio: 1.018720e-01	ci left: 4.463242e-02	ci right 4.945578e-02	k: 1410	n:30000
KS ci ratio: 3.119127e-02	ci left: 3.394865e-01	ci right 3.502769e-01	k: 10346	n:30000
STC2   30000 perm   9 sec   (3407 perm/sec)   p_kst 3.448667e-01   p_cons 4.700000e-02   p_joint 5.930000e-02

Joint ci ratio: 7.737262e-02	ci left: 5.796217e-02	ci right 6.265191e-02	k: 2411	n:40000
Cons ci ratio: 8.463467e-02	ci left: 4.874173e-02	ci right 5.307376e-02	k: 2035	n:40000
KS ci ratio: 2.705282e-02	ci left: 3.395430e-01	ci right 3.488796e-01	k: 13768	n:40000
STC2   40000 perm   11 sec   (3658 perm/sec)   p_kst 3.442000e-01   p_cons 5.087500e-02   p_joint 6.027500e-02

Outputting figure to mutsig2_images.part000000000168/STC2.2_925_40000_0.3442_0.050875_0.060275.png
                gene_name: STC2
               theta_stop: 0.085 
                    nperm: 40000 
                     p_ks: 0.34 
        ci_ks_bounds_left: 0.34 
       ci_ks_bounds_right: 0.35 
                   p_cons: 0.051 
      ci_cons_bounds_left: 0.049 
     ci_cons_bounds_right: 0.053 
                  p_joint: 0.060 
     ci_joint_bounds_left: 0.058 
    ci_joint_bounds_right: 0.063 

Current progress: 25 percent done.
STK31
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.245171e-02	ci left: 5.835963e-01	ci right 6.029494e-01	k: 5933	n:10000
KS ci ratio: 1.771079e-02	ci left: 8.230004e-01	ci right 8.378066e-01	k: 8305	n:10000
STK31   10000 perm   2 sec   (5263 perm/sec)   p_kst 8.305000e-01   p_cons 5.933000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000168/STK31.2_3156_10000_0.8305_0.5933_1.png
                gene_name: STK31
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.84 
                   p_cons: 0.59 
      ci_cons_bounds_left: 0.58 
     ci_cons_bounds_right: 0.60 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
STK32B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.870345e-02	ci left: 4.964503e-01	ci right 5.161460e-01	k: 5063	n:10000
Cons ci ratio: 2.115201e-02	ci left: 7.661798e-01	ci right 7.826601e-01	k: 7745	n:10000
KS ci ratio: 7.709916e-02	ci left: 1.974200e-01	ci right 2.133520e-01	k: 2053	n:10000
STK32B   10000 perm   2 sec   (6371 perm/sec)   p_kst 2.053000e-01   p_cons 7.745000e-01   p_joint 5.063000e-01

Outputting figure to mutsig2_images.part000000000168/STK32B.2_1293_10000_0.2053_0.7745_0.5063.png
                gene_name: STK32B
               theta_stop: 0.077 
                    nperm: 10000 
                     p_ks: 0.21 
        ci_ks_bounds_left: 0.20 
       ci_ks_bounds_right: 0.21 
                   p_cons: 0.77 
      ci_cons_bounds_left: 0.77 
     ci_cons_bounds_right: 0.78 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 75 percent done.
STT3A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.366825e-02	ci left: 3.384607e-01	ci right 3.572280e-01	k: 3478	n:10000
KS ci ratio: 5.514330e-02	ci left: 3.263440e-01	ci right 3.449518e-01	k: 3356	n:10000
STT3A   10000 perm   2 sec   (5715 perm/sec)   p_kst 3.356000e-01   p_cons 3.478000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000168/STT3A.2_2186_10000_0.3356_0.3478_1.png
                gene_name: STT3A
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.34 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.35 
      ci_cons_bounds_left: 0.34 
     ci_cons_bounds_right: 0.36 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000168
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 168 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1650>
Subject: Job 8704376: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1650>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000169> was used as the working directory.
Started at Thu Nov 15 19:36:57 2012
Results reported at Thu Nov 15 19:39:46 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000169.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000169.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 169  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000169.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    195.95 sec.
    Max Memory :      6053 MB
    Max Swap   :      8892 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
169
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 169
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 169: processing genes 15199 - 15289
Calculating significance of each gene.
Using projection method.
15199	STX11	1
15200	STX12	1
15201	STX16	1
15202	STX17	1
15203	STX18	1
15204	STX19	1
15205	STX1A	1
15206	STX1B	1
15207	STX2	1
15208	STX3	1
15209	STX4	7.135613e-02
15210	STX5	1
15211	STX6	1
15212	STX7	1
15213	STX8	1
15214	STXBP1	1
15215	STXBP2	1
15216	STXBP3	1
15217	STXBP4	1
15218	STXBP5	1.281284e-01
15219	STXBP5L	8.081839e-03
15220	STXBP6	1.728690e-02
15221	STYK1	1
15222	STYX	1
15223	STYXL1	1
15224	SUB1	1
15225	SUCLA2	1
15226	SUCLG1	1
15227	SUCLG2	1
15228	SUCNR1	1
15229	SUDS3	1
In gene SUFU the following bins exceed PROBCAP:
    THCA-FY-A3ON-TP	categ 6	N = 1478    n = 1	mu =   2.03e-07
15230	SUFU	1.594524e-01
15231	SUGT1	1
15232	SULF1	1
15233	SULF2	3.412164e-01
15234	SULT1A1	1
15235	SULT1A2	1
15236	SULT1B1	1
15237	SULT1C2	1
15238	SULT1C3	1
15239	SULT1C4	1
15240	SULT1E1	1
15241	SULT2A1	1
15242	SULT2B1	1
15243	SULT4A1	1
15244	SULT6B1	1
15245	SUMF1	1
15246	SUMF2	1
15247	SUMO1	1
15248	SUMO2	1
15249	SUMO3	1
15250	SUMO4	1
15251	SUN1	1
15252	SUN2	1
15253	SUN3	1
15254	SUN5	1
In gene SUOX the following bins exceed PROBCAP:
    THCA-BJ-A0Z2-TP	categ 6	N = 1650    n = 1	mu =   1.33e-07
15255	SUOX	3.695045e-03
15256	SUPT16H	1
15257	SUPT3H	1
15258	SUPT4H1	1
15259	SUPT5H	1
15260	SUPT6H	1
15261	SUPT7L	1
15262	SUPV3L1	2.097872e-01
15263	SURF1	1
15264	SURF2	1
15265	SURF4	1
15266	SURF6	1
15267	SUSD1	2.366661e-01
15268	SUSD2	1
15269	SUSD3	1
15270	SUSD4	1
15271	SUSD5	1
15272	SUV39H1	1
15273	SUV39H2	1
15274	SUV420H1	6.610782e-02
15275	SUV420H2	9.495221e-02
15276	SUZ12	1
15277	SV2A	1
15278	SV2B	1
15279	SV2C	1
15280	SVEP1	5.139543e-01
In gene SVIL the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 5	N = 6785    n = 1	mu =   1.33e-07
    THCA-BJ-A28S-TP	categ 6	N = 6773    n = 1	mu =   2.86e-07
15281	SVIL	9.850210e-02
15282	SVIP	1
15283	SVOP	1
In gene SVOPL the following bins exceed PROBCAP:
    THCA-EM-A1CV-TP	categ 6	N = 1125    n = 1	mu =   1.03e-07
15284	SVOPL	6.110640e-02
15285	SWAP70	1
15286	SYAP1	1
15287	SYBU	1
In gene SYCE1 the following bins exceed PROBCAP:
    THCA-EL-A3D4-TP	categ 6	N = 864     n = 1	mu =   6.97e-08
15288	SYCE1	2.925784e-02
15289	SYCE2	1
Done

Running MutSig 2:
Scatter job 169: processing genes 15199 - 15289
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
STXBP5L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.877516e-02	ci left: 6.403578e-01	ci right 6.591549e-01	k: 6498	n:10000
KS ci ratio: 2.096428e-02	ci left: 7.693191e-01	ci right 7.857189e-01	k: 7776	n:10000
STXBP5L   10000 perm   2 sec   (4309 perm/sec)   p_kst 7.776000e-01   p_cons 6.498000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000169/STXBP5L.3_3669_10000_0.7776_0.6498_1.png
                gene_name: STXBP5L
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.77 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.65 
      ci_cons_bounds_left: 0.64 
     ci_cons_bounds_right: 0.66 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
SVIL
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.091704e-01	ci left: 1.079317e-01	ci right 1.204941e-01	k: 1141	n:10000
Cons ci ratio: 2.095758e-01	ci left: 3.024949e-02	ci right 3.742541e-02	k: 337	n:10000
KS ci ratio: 1.221968e-01	ci left: 8.757121e-02	ci right 9.906697e-02	k: 932	n:10000
SVIL   10000 perm   3 sec   (3926 perm/sec)   p_kst 9.320000e-02   p_cons 3.370000e-02   p_joint 1.141000e-01

Joint ci ratio: 1.198764e-01	ci left: 4.770004e-02	ci right 5.383140e-02	k: 1014	n:20000
Cons ci ratio: 1.460843e-01	ci left: 3.220637e-02	ci right 3.733005e-02	k: 694	n:20000
KS ci ratio: 8.617888e-02	ci left: 8.969559e-02	ci right 9.782296e-02	k: 1874	n:20000
SVIL   20000 perm   6 sec   (3574 perm/sec)   p_kst 9.370000e-02   p_cons 3.470000e-02   p_joint 5.070000e-02

Joint ci ratio: 1.250818e-01	ci left: 2.971393e-02	ci right 3.371077e-02	k: 950	n:30000
Cons ci ratio: 1.191894e-01	ci left: 3.272222e-02	ci right 3.690183e-02	k: 1043	n:30000
KS ci ratio: 6.958309e-02	ci left: 9.232808e-02	ci right 9.901712e-02	k: 2869	n:30000
SVIL   30000 perm   9 sec   (3503 perm/sec)   p_kst 9.563333e-02   p_cons 3.476667e-02   p_joint 3.166667e-02

Joint ci ratio: 1.032215e-01	ci left: 3.300092e-02	ci right 3.661702e-02	k: 1391	n:40000
Cons ci ratio: 1.032599e-01	ci left: 3.297654e-02	ci right 3.659140e-02	k: 1390	n:40000
KS ci ratio: 6.016245e-02	ci left: 9.305597e-02	ci right 9.885284e-02	k: 3837	n:40000
SVIL   40000 perm   12 sec   (3388 perm/sec)   p_kst 9.592500e-02   p_cons 3.475000e-02   p_joint 3.477500e-02

Joint ci ratio: 7.324567e-02	ci left: 5.219207e-02	ci right 5.617989e-02	k: 2708	n:50000
Cons ci ratio: 9.224196e-02	ci left: 3.324973e-02	ci right 3.648456e-02	k: 1742	n:50000
KS ci ratio: 5.408267e-02	ci left: 9.250274e-02	ci right 9.766438e-02	k: 4753	n:50000
SVIL   50000 perm   15 sec   (3375 perm/sec)   p_kst 9.506000e-02   p_cons 3.484000e-02   p_joint 5.416000e-02

Outputting figure to mutsig2_images.part000000000169/SVIL.3_6785_50000_0.09506_0.03484_0.05416.png
                gene_name: SVIL
               theta_stop: 0.092 
                    nperm: 50000 
                     p_ks: 0.095 
        ci_ks_bounds_left: 0.093 
       ci_ks_bounds_right: 0.098 
                   p_cons: 0.035 
      ci_cons_bounds_left: 0.033 
     ci_cons_bounds_right: 0.036 
                  p_joint: 0.054 
     ci_joint_bounds_left: 0.052 
    ci_joint_bounds_right: 0.056 

Current progress: 50 percent done.
SUOX
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.391724e-02	ci left: 2.113215e-01	ci right 2.276422e-01	k: 2194	n:10000
Cons ci ratio: 5.859226e-02	ci left: 3.000492e-01	ci right 3.182621e-01	k: 3091	n:10000
KS ci ratio: 7.409025e-02	ci left: 2.105324e-01	ci right 2.268318e-01	k: 2186	n:10000
SUOX   10000 perm   2 sec   (6192 perm/sec)   p_kst 2.186000e-01   p_cons 3.091000e-01   p_joint 2.194000e-01

Outputting figure to mutsig2_images.part000000000169/SUOX.2_1650_10000_0.2186_0.3091_0.2194.png
                gene_name: SUOX
               theta_stop: 0.074 
                    nperm: 10000 
                     p_ks: 0.22 
        ci_ks_bounds_left: 0.21 
       ci_ks_bounds_right: 0.23 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.30 
     ci_cons_bounds_right: 0.32 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.21 
    ci_joint_bounds_right: 0.23 

Current progress: 75 percent done.
SUV420H1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.995464e-02	ci left: 6.217570e-01	ci right 6.407665e-01	k: 6313	n:10000
Cons ci ratio: 7.483523e-02	ci left: 2.071791e-01	ci right 2.233870e-01	k: 2152	n:10000
KS ci ratio: 9.176931e-02	ci left: 1.471732e-01	ci right 1.614288e-01	k: 1542	n:10000
SUV420H1   10000 perm   2 sec   (5803 perm/sec)   p_kst 1.542000e-01   p_cons 2.152000e-01   p_joint 6.313000e-01

Outputting figure to mutsig2_images.part000000000169/SUV420H1.2_2706_10000_0.1542_0.2152_0.6313.png
                gene_name: SUV420H1
               theta_stop: 0.092 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.15 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.22 
      ci_cons_bounds_left: 0.21 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.63 
     ci_joint_bounds_left: 0.62 
    ci_joint_bounds_right: 0.64 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000169
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 169 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1554>
Subject: Job 8704380: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1554>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000170> was used as the working directory.
Started at Thu Nov 15 19:37:04 2012
Results reported at Thu Nov 15 23:02:30 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000170.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000170.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 170  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000170.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  13261.04 sec.
    Max Memory :      6144 MB
    Max Swap   :      8560 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
170
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 170
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 170: processing genes 15290 - 15379
Calculating significance of each gene.
Using projection method.
15290	SYCN	1
15291	SYCP1	1
15292	SYCP2	1
15293	SYCP2L	2.558285e-01
15294	SYCP3	1
15295	SYDE1	1
15296	SYDE2	1
15297	SYF2	1
15298	SYK	6.813401e-02
15299	SYMPK	1
15300	SYN1	1
15301	SYN2	1
15302	SYN3	1
15303	SYNC	1
15304	SYNCRIP	8.907448e-02
In gene SYNE1 the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 27051   n = 1	mu =   1.66e-07
15305	SYNE1	7.951541e-01
15306	SYNE2	2.961329e-01
15307	SYNGAP1	1
15308	SYNGR1	1
15309	SYNGR2	1
15310	SYNGR3	1
15311	SYNGR4	8.293853e-02
15312	SYNJ1	1
15313	SYNJ2	3.619332e-01
15314	SYNJ2BP	1
15315	SYNM	1
15316	SYNPO	1
In gene SYNPO2 the following bins exceed PROBCAP:
    THCA-ET-A39N-TP	categ 6	N = 3816    n = 1	mu =   3.51e-08
15317	SYNPO2	3.109347e-02
15318	SYNPO2L	1.738137e-03
15319	SYNPR	1
15320	SYNRG	1
15321	SYP	1
15322	SYPL1	1
15323	SYPL2	1
15324	SYS1	1
15325	SYT1	3.351435e-02
15326	SYT10	1
15327	SYT11	1
15328	SYT12	1.902245e-01
15329	SYT13	1
15330	SYT14	1
15331	SYT15	1
15332	SYT16	1
15333	SYT17	2.255212e-01
15334	SYT2	1
15335	SYT3	1
15336	SYT4	1
15337	SYT5	1
15338	SYT6	1
15339	SYT7	1
15340	SYT8	1
15341	SYT9	1
15342	SYTL1	1
15343	SYTL2	1
15344	SYTL3	1.915739e-02
15345	SYTL4	2.477704e-02
15346	SYTL5	1
15347	SYVN1	1
15348	T	1
15349	TAAR1	1
15350	TAAR2	1
15351	TAAR5	6.274554e-02
15352	TAAR6	1
15353	TAAR8	6.321683e-02
15354	TAAR9	1
15355	TAB1	1
15356	TAB2	1
15357	TAB3	7.379383e-02
15358	TAC1	1
15359	TAC3	1
15360	TAC4	1
15361	TACC1	1
15362	TACC2	1.815816e-01
15363	TACC3	1
15364	TACO1	1
15365	TACR1	1
15366	TACR2	1
15367	TACR3	1.124163e-01
15368	TACSTD2	1
15369	TADA1	1
15370	TADA2A	1
15371	TADA2B	1
15372	TADA3	1
15373	TAF1	2.718641e-01
15374	TAF10	1
15375	TAF11	1
15376	TAF12	1
15377	TAF13	1
15378	TAF15	1
15379	TAF1A	1
Done

Running MutSig 2:
Scatter job 170: processing genes 15290 - 15379
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
SYNE2
Processing conservation and coverage...
47% 94% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.757246e-01	ci left: 4.322176e-02	ci right 5.164440e-02	k: 473	n:10000
Cons ci ratio: 1.668597e-01	ci left: 4.792139e-02	ci right 5.674170e-02	k: 522	n:10000
KS ci ratio: 1.034263e-01	ci left: 1.190667e-01	ci right 1.321523e-01	k: 1255	n:10000
SYNE2   10000 perm   6 sec   (1655 perm/sec)   p_kst 1.255000e-01   p_cons 5.220000e-02   p_joint 4.730000e-02

Joint ci ratio: 1.676740e-01	ci left: 2.436600e-02	ci right 2.887305e-02	k: 531	n:20000
Cons ci ratio: 1.297411e-01	ci left: 4.081147e-02	ci right 4.652216e-02	k: 872	n:20000
KS ci ratio: 7.268865e-02	ci left: 1.223163e-01	ci right 1.315924e-01	k: 2538	n:20000
SYNE2   20000 perm   16 sec   (1282 perm/sec)   p_kst 1.269000e-01   p_cons 4.360000e-02   p_joint 2.655000e-02

Joint ci ratio: 1.284692e-01	ci left: 2.816320e-02	ci right 3.206184e-02	k: 902	n:30000
Cons ci ratio: 1.065523e-01	ci left: 4.086211e-02	ci right 4.549355e-02	k: 1294	n:30000
KS ci ratio: 5.924797e-02	ci left: 1.235479e-01	ci right 1.311245e-01	k: 3819	n:30000
SYNE2   30000 perm   22 sec   (1344 perm/sec)   p_kst 1.273000e-01   p_cons 4.313333e-02   p_joint 3.006667e-02

Joint ci ratio: 1.229057e-01	ci left: 2.327380e-02	ci right 2.634571e-02	k: 991	n:40000
Cons ci ratio: 9.305924e-02	ci left: 4.049500e-02	ci right 4.447176e-02	k: 1698	n:40000
KS ci ratio: 5.156789e-02	ci left: 1.229604e-01	ci right 1.294939e-01	k: 5048	n:40000
SYNE2   40000 perm   29 sec   (1365 perm/sec)   p_kst 1.262000e-01   p_cons 4.245000e-02   p_joint 2.477500e-02

Joint ci ratio: 1.024259e-01	ci left: 2.700042e-02	ci right 2.993467e-02	k: 1422	n:50000
Cons ci ratio: 8.405983e-02	ci left: 3.992527e-02	ci right 4.344820e-02	k: 2083	n:50000
KS ci ratio: 4.622129e-02	ci left: 1.228456e-01	ci right 1.286779e-01	k: 6287	n:50000
SYNE2   50000 perm   36 sec   (1387 perm/sec)   p_kst 1.257400e-01   p_cons 4.166000e-02   p_joint 2.844000e-02

Joint ci ratio: 9.769208e-02	ci left: 2.485519e-02	ci right 2.742425e-02	k: 1567	n:60000
Cons ci ratio: 7.089558e-02	ci left: 4.676188e-02	ci right 5.021530e-02	k: 2908	n:60000
KS ci ratio: 4.212263e-02	ci left: 1.234701e-01	ci right 1.287994e-01	k: 7567	n:60000
SYNE2   60000 perm   43 sec   (1401 perm/sec)   p_kst 1.261167e-01   p_cons 4.846667e-02   p_joint 2.611667e-02

Outputting figure to mutsig2_images.part000000000170/SYNE2.4_21229_60000_0.12612_0.048467_0.026117.png
                gene_name: SYNE2
               theta_stop: 0.098 
                    nperm: 60000 
                     p_ks: 0.13 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.048 
      ci_cons_bounds_left: 0.047 
     ci_cons_bounds_right: 0.050 
                  p_joint: 0.026 
     ci_joint_bounds_left: 0.025 
    ci_joint_bounds_right: 0.027 

Current progress: 14 percent done.
SYNE1
Processing conservation and coverage...
36% 73% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.136983e-02	ci left: 7.625349e-01	ci right 7.791070e-01	k: 7709	n:10000
Cons ci ratio: 3.421012e-02	ci left: 5.578216e-01	ci right 5.773390e-01	k: 5676	n:10000
KS ci ratio: 2.810189e-02	ci left: 6.511231e-01	ci right 6.697834e-01	k: 6605	n:10000
SYNE1   10000 perm   7 sec   (1513 perm/sec)   p_kst 6.605000e-01   p_cons 5.676000e-01   p_joint 7.709000e-01

Outputting figure to mutsig2_images.part000000000170/SYNE1.3_27068_10000_0.6605_0.5676_0.7709.png
                gene_name: SYNE1
               theta_stop: 0.034 
                    nperm: 10000 
                     p_ks: 0.66 
        ci_ks_bounds_left: 0.65 
       ci_ks_bounds_right: 0.67 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.77 
     ci_joint_bounds_left: 0.76 
    ci_joint_bounds_right: 0.78 

Current progress: 29 percent done.
SYNPO2L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919608e+00	ci left: 0	ci right 3.688199e-04	k: 0	n:10000
Cons ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
SYNPO2L   10000 perm   2 sec   (5668 perm/sec)   p_kst 1.000000e-04   p_cons 1.000000e-04   p_joint 0

Joint ci ratio: 3.919804e+00	ci left: 0	ci right 1.844270e-04	k: 0	n:20000
Cons ci ratio: 1.181570e+00	ci left: 2.397946e-04	ci right 9.193249e-04	k: 10	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
SYNPO2L   20000 perm   4 sec   (4903 perm/sec)   p_kst 5.000000e-05   p_cons 5.000000e-04   p_joint 0

Joint ci ratio: 3.919869e+00	ci left: 0	ci right 1.229551e-04	k: 0	n:30000
Cons ci ratio: 9.236603e-01	ci left: 3.301378e-04	ci right 9.071337e-04	k: 17	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
SYNPO2L   30000 perm   7 sec   (4609 perm/sec)   p_kst 3.333333e-05   p_cons 5.666667e-04   p_joint 0

Joint ci ratio: 3.919902e+00	ci left: 0	ci right 9.221773e-05	k: 0	n:40000
Cons ci ratio: 8.171313e-01	ci left: 3.447132e-04	ci right 8.325889e-04	k: 22	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
SYNPO2L   40000 perm   9 sec   (4504 perm/sec)   p_kst 2.500000e-05   p_cons 5.500000e-04   p_joint 0

Joint ci ratio: 3.919922e+00	ci left: 0	ci right 7.377487e-05	k: 0	n:50000
Cons ci ratio: 7.405955e-01	ci left: 3.558926e-04	ci right 7.855751e-04	k: 27	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
SYNPO2L   50000 perm   11 sec   (4396 perm/sec)   p_kst 2.000000e-05   p_cons 5.400000e-04   p_joint 0

Joint ci ratio: 3.919935e+00	ci left: 0	ci right 6.147943e-05	k: 0	n:60000
Cons ci ratio: 7.155059e-01	ci left: 3.237191e-04	ci right 6.940741e-04	k: 29	n:60000
KS ci ratio: 2.263138e+00	ci left: 4.036847e-06	ci right 1.204062e-04	k: 2	n:60000
SYNPO2L   60000 perm   14 sec   (4309 perm/sec)   p_kst 3.333333e-05   p_cons 4.833333e-04   p_joint 0

Joint ci ratio: 3.919944e+00	ci left: 0	ci right 5.269689e-05	k: 0	n:70000
Cons ci ratio: 7.038918e-01	ci left: 2.891734e-04	ci right 6.117563e-04	k: 30	n:70000
KS ci ratio: 2.263148e+00	ci left: 3.460151e-06	ci right 1.032060e-04	k: 2	n:70000
SYNPO2L   70000 perm   17 sec   (4213 perm/sec)   p_kst 2.857143e-05   p_cons 4.285714e-04   p_joint 0

Joint ci ratio: 3.919951e+00	ci left: 0	ci right 4.610993e-05	k: 0	n:80000
Cons ci ratio: 6.357530e-01	ci left: 3.256629e-04	ci right 6.374395e-04	k: 37	n:80000
KS ci ratio: 2.263156e+00	ci left: 3.027630e-06	ci right 9.030565e-05	k: 2	n:80000
SYNPO2L   80000 perm   19 sec   (4129 perm/sec)   p_kst 2.500000e-05   p_cons 4.625000e-04   p_joint 0

Joint ci ratio: 3.919956e+00	ci left: 0	ci right 4.098671e-05	k: 0	n:90000
Cons ci ratio: 5.908145e-01	ci left: 3.457911e-04	ci right 6.435102e-04	k: 43	n:90000
KS ci ratio: 2.263163e+00	ci left: 2.691226e-06	ci right 8.027198e-05	k: 2	n:90000
SYNPO2L   90000 perm   22 sec   (4056 perm/sec)   p_kst 2.222222e-05   p_cons 4.777778e-04   p_joint 0

Joint ci ratio: 3.919961e+00	ci left: 0	ci right 3.688811e-05	k: 0	n:100000
Cons ci ratio: 5.656646e-01	ci left: 3.453581e-04	ci right 6.249519e-04	k: 47	n:100000
KS ci ratio: 2.263168e+00	ci left: 2.422102e-06	ci right 7.224499e-05	k: 2	n:100000
SYNPO2L   100000 perm   25 sec   (3981 perm/sec)   p_kst 2.000000e-05   p_cons 4.700000e-04   p_joint 0

Joint ci ratio: 3.919964e+00	ci left: 0	ci right 3.353471e-05	k: 0	n:110000
Cons ci ratio: 5.333111e-01	ci left: 3.609351e-04	ci right 6.301833e-04	k: 53	n:110000
KS ci ratio: 2.263172e+00	ci left: 2.201910e-06	ci right 6.567742e-05	k: 2	n:110000
SYNPO2L   110000 perm   28 sec   (3912 perm/sec)   p_kst 1.818182e-05   p_cons 4.818182e-04   p_joint 0

Joint ci ratio: 3.919967e+00	ci left: 0	ci right 3.074019e-05	k: 0	n:120000
Cons ci ratio: 5.017749e-01	ci left: 3.815737e-04	ci right 6.435529e-04	k: 60	n:120000
KS ci ratio: 2.263175e+00	ci left: 2.018417e-06	ci right 6.020442e-05	k: 2	n:120000
SYNPO2L   120000 perm   31 sec   (3852 perm/sec)   p_kst 1.666667e-05   p_cons 5.000000e-04   p_joint 0

Joint ci ratio: 3.919970e+00	ci left: 0	ci right 2.837559e-05	k: 0	n:130000
Cons ci ratio: 4.787790e-01	ci left: 3.926703e-04	ci right 6.458645e-04	k: 66	n:130000
KS ci ratio: 2.263178e+00	ci left: 1.863154e-06	ci right 5.557340e-05	k: 2	n:130000
SYNPO2L   130000 perm   34 sec   (3781 perm/sec)   p_kst 1.538462e-05   p_cons 5.076923e-04   p_joint 0

Joint ci ratio: 3.919972e+00	ci left: 0	ci right 2.634879e-05	k: 0	n:140000
Cons ci ratio: 4.275772e-01	ci left: 4.722342e-04	ci right 7.348834e-04	k: 83	n:140000
KS ci ratio: 2.263181e+00	ci left: 1.730071e-06	ci right 5.160395e-05	k: 2	n:140000
SYNPO2L   140000 perm   38 sec   (3717 perm/sec)   p_kst 1.428571e-05   p_cons 5.928571e-04   p_joint 0

Joint ci ratio: 3.919974e+00	ci left: 0	ci right 2.459223e-05	k: 0	n:150000
Cons ci ratio: 4.085615e-01	ci left: 4.884774e-04	ci right 7.448008e-04	k: 91	n:150000
KS ci ratio: 2.263183e+00	ci left: 1.614733e-06	ci right 4.816375e-05	k: 2	n:150000
SYNPO2L   150000 perm   41 sec   (3646 perm/sec)   p_kst 1.333333e-05   p_cons 6.066667e-04   p_joint 0

Joint ci ratio: 3.919976e+00	ci left: 0	ci right 2.305523e-05	k: 0	n:160000
Cons ci ratio: 3.978938e-01	ci left: 4.860281e-04	ci right 7.326541e-04	k: 96	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
SYNPO2L   160000 perm   45 sec   (3573 perm/sec)   p_kst 6.250000e-06   p_cons 6.000000e-04   p_joint 0

Joint ci ratio: 3.919977e+00	ci left: 0	ci right 2.169906e-05	k: 0	n:170000
Cons ci ratio: 3.880202e-01	ci left: 4.839438e-04	ci right 7.218607e-04	k: 101	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
SYNPO2L   170000 perm   48 sec   (3512 perm/sec)   p_kst 5.882353e-06   p_cons 5.941176e-04   p_joint 0

Joint ci ratio: 3.919978e+00	ci left: 0	ci right 2.049356e-05	k: 0	n:180000
Cons ci ratio: 3.719542e-01	ci left: 5.022850e-04	ci right 7.365079e-04	k: 110	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
SYNPO2L   180000 perm   52 sec   (3444 perm/sec)   p_kst 5.555556e-06   p_cons 6.111111e-04   p_joint 0

Joint ci ratio: 3.919979e+00	ci left: 0	ci right 1.941497e-05	k: 0	n:190000
Cons ci ratio: 3.592323e-01	ci left: 5.140878e-04	ci right 7.436992e-04	k: 118	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
SYNPO2L   190000 perm   56 sec   (3391 perm/sec)   p_kst 5.263158e-06   p_cons 6.210526e-04   p_joint 0

Joint ci ratio: 3.919980e+00	ci left: 0	ci right 1.844423e-05	k: 0	n:200000
Cons ci ratio: 3.463706e-01	ci left: 5.293975e-04	ci right 7.554840e-04	k: 127	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
SYNPO2L   200000 perm   60 sec   (3342 perm/sec)   p_kst 5.000000e-06   p_cons 6.350000e-04   p_joint 0

Joint ci ratio: 3.919981e+00	ci left: 0	ci right 1.756594e-05	k: 0	n:210000
Cons ci ratio: 3.372706e-01	ci left: 5.346609e-04	ci right 7.556917e-04	k: 134	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
SYNPO2L   210000 perm   64 sec   (3293 perm/sec)   p_kst 4.761905e-06   p_cons 6.380952e-04   p_joint 0

Joint ci ratio: 3.919982e+00	ci left: 0	ci right 1.676749e-05	k: 0	n:220000
Cons ci ratio: 3.311943e-01	ci left: 5.311782e-04	ci right 7.459699e-04	k: 139	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
SYNPO2L   220000 perm   68 sec   (3246 perm/sec)   p_kst 4.545455e-06   p_cons 6.318182e-04   p_joint 0

Joint ci ratio: 3.919983e+00	ci left: 0	ci right 1.603848e-05	k: 0	n:230000
Cons ci ratio: 3.265637e-01	ci left: 5.240387e-04	ci right 7.323592e-04	k: 143	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
SYNPO2L   230000 perm   72 sec   (3203 perm/sec)   p_kst 4.347826e-06   p_cons 6.217391e-04   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.537021e-05	k: 0	n:240000
Cons ci ratio: 1.975755e-01	ci left: 1.475740e-03	ci right 1.803151e-03	k: 392	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
SYNPO2L   240000 perm   76 sec   (3158 perm/sec)   p_kst 4.166667e-06   p_cons 1.633333e-03   p_joint 0

Joint ci ratio: 3.919984e+00	ci left: 0	ci right 1.475541e-05	k: 0	n:250000
Cons ci ratio: 1.924975e-01	ci left: 1.496610e-03	ci right 1.819119e-03	k: 413	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
SYNPO2L   250000 perm   80 sec   (3115 perm/sec)   p_kst 4.000000e-06   p_cons 1.652000e-03   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.418790e-05	k: 0	n:260000
Cons ci ratio: 1.888824e-01	ci left: 1.497649e-03	ci right 1.813626e-03	k: 429	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
SYNPO2L   260000 perm   85 sec   (3073 perm/sec)   p_kst 3.846154e-06   p_cons 1.650000e-03   p_joint 0

Joint ci ratio: 3.919985e+00	ci left: 0	ci right 1.366242e-05	k: 0	n:270000
Cons ci ratio: 1.852558e-01	ci left: 1.502196e-03	ci right 1.812362e-03	k: 446	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
SYNPO2L   270000 perm   89 sec   (3032 perm/sec)   p_kst 3.703704e-06   p_cons 1.651852e-03   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.317448e-05	k: 0	n:280000
Cons ci ratio: 1.814390e-01	ci left: 1.513290e-03	ci right 1.818602e-03	k: 465	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
SYNPO2L   280000 perm   94 sec   (2992 perm/sec)   p_kst 3.571429e-06   p_cons 1.660714e-03   p_joint 0

Joint ci ratio: 3.919986e+00	ci left: 0	ci right 1.272019e-05	k: 0	n:290000
Cons ci ratio: 1.778488e-01	ci left: 1.523679e-03	ci right 1.824351e-03	k: 484	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
SYNPO2L   290000 perm   98 sec   (2954 perm/sec)   p_kst 3.448276e-06   p_cons 1.668966e-03   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.229619e-05	k: 0	n:300000
Cons ci ratio: 1.744637e-01	ci left: 1.533432e-03	ci right 1.829661e-03	k: 503	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
SYNPO2L   300000 perm   103 sec   (2916 perm/sec)   p_kst 3.333333e-06   p_cons 1.676667e-03   p_joint 0

Joint ci ratio: 3.919987e+00	ci left: 0	ci right 1.189954e-05	k: 0	n:310000
Cons ci ratio: 1.715937e-01	ci left: 1.536430e-03	ci right 1.827851e-03	k: 520	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
SYNPO2L   310000 perm   108 sec   (2879 perm/sec)   p_kst 3.225806e-06   p_cons 1.677419e-03   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.152768e-05	k: 0	n:320000
Cons ci ratio: 1.685473e-01	ci left: 1.545265e-03	ci right 1.832630e-03	k: 539	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
SYNPO2L   320000 perm   112 sec   (2845 perm/sec)   p_kst 3.125000e-06   p_cons 1.684375e-03   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.117836e-05	k: 0	n:330000
Cons ci ratio: 1.668579e-01	ci left: 1.530372e-03	ci right 1.811828e-03	k: 550	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
SYNPO2L   330000 perm   118 sec   (2805 perm/sec)   p_kst 3.030303e-06   p_cons 1.666667e-03   p_joint 0

Joint ci ratio: 3.919988e+00	ci left: 0	ci right 1.084959e-05	k: 0	n:340000
Cons ci ratio: 1.636221e-01	ci left: 1.547393e-03	ci right 1.825917e-03	k: 572	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
SYNPO2L   340000 perm   123 sec   (2772 perm/sec)   p_kst 2.941176e-06   p_cons 1.682353e-03   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.053960e-05	k: 0	n:350000
Cons ci ratio: 1.605674e-01	ci left: 1.563490e-03	ci right 1.839151e-03	k: 594	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
SYNPO2L   350000 perm   128 sec   (2739 perm/sec)   p_kst 2.857143e-06   p_cons 1.697143e-03   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 1.024683e-05	k: 0	n:360000
Cons ci ratio: 1.583216e-01	ci left: 1.565398e-03	ci right 1.837168e-03	k: 611	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
SYNPO2L   360000 perm   133 sec   (2709 perm/sec)   p_kst 2.777778e-06   p_cons 1.697222e-03   p_joint 0

Joint ci ratio: 3.919989e+00	ci left: 0	ci right 9.969895e-06	k: 0	n:370000
Cons ci ratio: 1.560433e-01	ci left: 1.569825e-03	ci right 1.838075e-03	k: 629	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
SYNPO2L   370000 perm   138 sec   (2679 perm/sec)   p_kst 2.702703e-06   p_cons 1.700000e-03   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.707530e-06	k: 0	n:380000
Cons ci ratio: 1.542186e-01	ci left: 1.566455e-03	ci right 1.830710e-03	k: 644	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
SYNPO2L   380000 perm   143 sec   (2649 perm/sec)   p_kst 2.631579e-06   p_cons 1.694737e-03   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.458621e-06	k: 0	n:390000
Cons ci ratio: 1.514257e-01	ci left: 1.585476e-03	ci right 1.847657e-03	k: 668	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
SYNPO2L   390000 perm   149 sec   (2618 perm/sec)   p_kst 2.564103e-06   p_cons 1.712821e-03   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 9.222156e-06	k: 0	n:400000
Cons ci ratio: 1.491029e-01	ci left: 1.596366e-03	ci right 1.855937e-03	k: 689	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
SYNPO2L   400000 perm   154 sec   (2589 perm/sec)   p_kst 2.500000e-06   p_cons 1.722500e-03   p_joint 0

Joint ci ratio: 3.919990e+00	ci left: 0	ci right 8.997226e-06	k: 0	n:410000
Cons ci ratio: 1.472994e-01	ci left: 1.597356e-03	ci right 1.853670e-03	k: 706	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
SYNPO2L   410000 perm   160 sec   (2560 perm/sec)   p_kst 2.439024e-06   p_cons 1.721951e-03   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.783008e-06	k: 0	n:420000
Cons ci ratio: 1.450590e-01	ci left: 1.609790e-03	ci right 1.863830e-03	k: 728	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
SYNPO2L   420000 perm   166 sec   (2532 perm/sec)   p_kst 2.380952e-06   p_cons 1.733333e-03   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.578753e-06	k: 0	n:430000
Cons ci ratio: 1.432045e-01	ci left: 1.614946e-03	ci right 1.866263e-03	k: 747	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
SYNPO2L   430000 perm   172 sec   (2505 perm/sec)   p_kst 2.325581e-06   p_cons 1.737209e-03   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.383782e-06	k: 0	n:440000
Cons ci ratio: 1.412351e-01	ci left: 1.624272e-03	ci right 1.873272e-03	k: 768	n:440000
KS ci ratio: 2.263203e+00	ci left: 5.504761e-07	ci right 1.641965e-05	k: 2	n:440000
SYNPO2L   440000 perm   178 sec   (2479 perm/sec)   p_kst 4.545455e-06   p_cons 1.745455e-03   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.197476e-06	k: 0	n:450000
Cons ci ratio: 1.390804e-01	ci left: 1.639641e-03	ci right 1.886845e-03	k: 792	n:450000
KS ci ratio: 2.263203e+00	ci left: 5.382433e-07	ci right 1.605477e-05	k: 2	n:450000
SYNPO2L   450000 perm   183 sec   (2452 perm/sec)   p_kst 4.444444e-06   p_cons 1.760000e-03   p_joint 0

Joint ci ratio: 3.919991e+00	ci left: 0	ci right 8.019271e-06	k: 0	n:460000
Cons ci ratio: 1.371898e-01	ci left: 1.650171e-03	ci right 1.895304e-03	k: 814	n:460000
KS ci ratio: 2.263203e+00	ci left: 5.265423e-07	ci right 1.570575e-05	k: 2	n:460000
SYNPO2L   460000 perm   190 sec   (2427 perm/sec)   p_kst 4.347826e-06   p_cons 1.769565e-03   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.848649e-06	k: 0	n:470000
Cons ci ratio: 1.360270e-01	ci left: 1.643830e-03	ci right 1.885783e-03	k: 828	n:470000
KS ci ratio: 2.263203e+00	ci left: 5.153393e-07	ci right 1.537159e-05	k: 2	n:470000
SYNPO2L   470000 perm   196 sec   (2400 perm/sec)   p_kst 4.255319e-06   p_cons 1.761702e-03   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.685136e-06	k: 0	n:480000
Cons ci ratio: 1.348131e-01	ci left: 1.639774e-03	ci right 1.878804e-03	k: 843	n:480000
KS ci ratio: 2.263204e+00	ci left: 5.046031e-07	ci right 1.505135e-05	k: 2	n:480000
SYNPO2L   480000 perm   202 sec   (2375 perm/sec)   p_kst 4.166667e-06   p_cons 1.756250e-03   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.528297e-06	k: 0	n:490000
Cons ci ratio: 1.336313e-01	ci left: 1.635893e-03	ci right 1.872101e-03	k: 858	n:490000
KS ci ratio: 2.263204e+00	ci left: 4.943050e-07	ci right 1.474418e-05	k: 2	n:490000
SYNPO2L   490000 perm   208 sec   (2350 perm/sec)   p_kst 4.081633e-06   p_cons 1.751020e-03   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.377732e-06	k: 0	n:500000
Cons ci ratio: 1.321773e-01	ci left: 1.639912e-03	ci right 1.873922e-03	k: 877	n:500000
KS ci ratio: 2.263204e+00	ci left: 4.844189e-07	ci right 1.444930e-05	k: 2	n:500000
SYNPO2L   500000 perm   215 sec   (2327 perm/sec)   p_kst 4.000000e-06   p_cons 1.754000e-03   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.233071e-06	k: 0	n:510000
Cons ci ratio: 1.307697e-01	ci left: 1.643787e-03	ci right 1.875657e-03	k: 896	n:510000
KS ci ratio: 2.263204e+00	ci left: 4.749205e-07	ci right 1.416598e-05	k: 2	n:510000
SYNPO2L   510000 perm   222 sec   (2301 perm/sec)   p_kst 3.921569e-06   p_cons 1.756863e-03   p_joint 0

Joint ci ratio: 3.919992e+00	ci left: 0	ci right 7.093974e-06	k: 0	n:520000
Cons ci ratio: 1.297615e-01	ci left: 1.638221e-03	ci right 1.867387e-03	k: 910	n:520000
KS ci ratio: 2.263204e+00	ci left: 4.657874e-07	ci right 1.389356e-05	k: 2	n:520000
SYNPO2L   520000 perm   228 sec   (2278 perm/sec)   p_kst 3.846154e-06   p_cons 1.750000e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.960126e-06	k: 0	n:530000
Cons ci ratio: 1.287065e-01	ci left: 1.634698e-03	ci right 1.861370e-03	k: 925	n:530000
KS ci ratio: 2.263205e+00	ci left: 4.569990e-07	ci right 1.363142e-05	k: 2	n:530000
SYNPO2L   530000 perm   235 sec   (2256 perm/sec)   p_kst 3.773585e-06   p_cons 1.745283e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.831235e-06	k: 0	n:540000
Cons ci ratio: 1.276768e-01	ci left: 1.631313e-03	ci right 1.855569e-03	k: 940	n:540000
KS ci ratio: 2.263205e+00	ci left: 4.485360e-07	ci right 1.337899e-05	k: 2	n:540000
SYNPO2L   540000 perm   242 sec   (2234 perm/sec)   p_kst 3.703704e-06   p_cons 1.740741e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.707031e-06	k: 0	n:550000
Cons ci ratio: 1.261439e-01	ci left: 1.642143e-03	ci right 1.864976e-03	k: 963	n:550000
KS ci ratio: 2.263205e+00	ci left: 4.403808e-07	ci right 1.313573e-05	k: 2	n:550000
SYNPO2L   550000 perm   249 sec   (2213 perm/sec)   p_kst 3.636364e-06   p_cons 1.750909e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.587263e-06	k: 0	n:560000
Cons ci ratio: 1.244126e-01	ci left: 1.659524e-03	ci right 1.881396e-03	k: 990	n:560000
KS ci ratio: 2.263205e+00	ci left: 4.325169e-07	ci right 1.290117e-05	k: 2	n:560000
SYNPO2L   560000 perm   256 sec   (2191 perm/sec)   p_kst 3.571429e-06   p_cons 1.767857e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.471697e-06	k: 0	n:570000
Cons ci ratio: 1.239145e-01	ci left: 1.644008e-03	ci right 1.862861e-03	k: 998	n:570000
KS ci ratio: 2.263205e+00	ci left: 4.249288e-07	ci right 1.267483e-05	k: 2	n:570000
SYNPO2L   570000 perm   262 sec   (2172 perm/sec)   p_kst 3.508772e-06   p_cons 1.750877e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.360117e-06	k: 0	n:580000
Cons ci ratio: 1.227525e-01	ci left: 1.647411e-03	ci right 1.864511e-03	k: 1017	n:580000
KS ci ratio: 2.263205e+00	ci left: 4.176025e-07	ci right 1.245630e-05	k: 2	n:580000
SYNPO2L   580000 perm   270 sec   (2151 perm/sec)   p_kst 3.448276e-06   p_cons 1.753448e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.252319e-06	k: 0	n:590000
Cons ci ratio: 1.213299e-01	ci left: 1.658925e-03	ci right 1.874828e-03	k: 1041	n:590000
KS ci ratio: 2.263205e+00	ci left: 4.105245e-07	ci right 1.224518e-05	k: 2	n:590000
SYNPO2L   590000 perm   277 sec   (2131 perm/sec)   p_kst 3.389831e-06   p_cons 1.764407e-03   p_joint 0

Joint ci ratio: 3.919993e+00	ci left: 0	ci right 6.148114e-06	k: 0	n:600000
Cons ci ratio: 1.206379e-01	ci left: 1.650671e-03	ci right 1.864186e-03	k: 1053	n:600000
KS ci ratio: 2.263206e+00	ci left: 4.036824e-07	ci right 1.204109e-05	k: 2	n:600000
SYNPO2L   600000 perm   284 sec   (2112 perm/sec)   p_kst 3.333333e-06   p_cons 1.755000e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 6.047325e-06	k: 0	n:610000
Cons ci ratio: 1.198449e-01	ci left: 1.645871e-03	ci right 1.857267e-03	k: 1067	n:610000
KS ci ratio: 2.263206e+00	ci left: 3.970646e-07	ci right 1.184370e-05	k: 2	n:610000
SYNPO2L   610000 perm   292 sec   (2093 perm/sec)   p_kst 3.278689e-06   p_cons 1.749180e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.949788e-06	k: 0	n:620000
Cons ci ratio: 1.188475e-01	ci left: 1.647490e-03	ci right 1.857209e-03	k: 1085	n:620000
KS ci ratio: 2.263206e+00	ci left: 3.906604e-07	ci right 1.165267e-05	k: 2	n:620000
SYNPO2L   620000 perm   299 sec   (2074 perm/sec)   p_kst 3.225806e-06   p_cons 1.750000e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.855347e-06	k: 0	n:630000
Cons ci ratio: 1.179817e-01	ci left: 1.645984e-03	ci right 1.853879e-03	k: 1101	n:630000
KS ci ratio: 2.263206e+00	ci left: 3.844594e-07	ci right 1.146771e-05	k: 2	n:630000
SYNPO2L   630000 perm   307 sec   (2055 perm/sec)   p_kst 3.174603e-06   p_cons 1.747619e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.763858e-06	k: 0	n:640000
Cons ci ratio: 1.169775e-01	ci left: 1.649081e-03	ci right 1.855471e-03	k: 1120	n:640000
KS ci ratio: 2.263206e+00	ci left: 3.784522e-07	ci right 1.128853e-05	k: 2	n:640000
SYNPO2L   640000 perm   314 sec   (2037 perm/sec)   p_kst 3.125000e-06   p_cons 1.750000e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.675183e-06	k: 0	n:650000
Cons ci ratio: 1.163054e-01	ci left: 1.643127e-03	ci right 1.847509e-03	k: 1133	n:650000
KS ci ratio: 2.263206e+00	ci left: 3.726299e-07	ci right 1.111486e-05	k: 2	n:650000
SYNPO2L   650000 perm   322 sec   (2019 perm/sec)   p_kst 3.076923e-06   p_cons 1.743077e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.589196e-06	k: 0	n:660000
Cons ci ratio: 1.152430e-01	ci left: 1.649128e-03	ci right 1.852255e-03	k: 1154	n:660000
KS ci ratio: 2.263206e+00	ci left: 3.669840e-07	ci right 1.094645e-05	k: 2	n:660000
SYNPO2L   660000 perm   330 sec   (2002 perm/sec)   p_kst 3.030303e-06   p_cons 1.748485e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.505775e-06	k: 0	n:670000
Cons ci ratio: 1.141119e-01	ci left: 1.657858e-03	ci right 1.859922e-03	k: 1177	n:670000
KS ci ratio: 2.263206e+00	ci left: 3.615066e-07	ci right 1.078307e-05	k: 2	n:670000
SYNPO2L   670000 perm   338 sec   (1985 perm/sec)   p_kst 2.985075e-06   p_cons 1.756716e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.424808e-06	k: 0	n:680000
Cons ci ratio: 1.131079e-01	ci left: 1.663483e-03	ci right 1.864329e-03	k: 1198	n:680000
KS ci ratio: 2.263206e+00	ci left: 3.561903e-07	ci right 1.062450e-05	k: 2	n:680000
SYNPO2L   680000 perm   345 sec   (1968 perm/sec)   p_kst 2.941176e-06   p_cons 1.761765e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.346188e-06	k: 0	n:690000
Cons ci ratio: 1.124072e-01	ci left: 1.660500e-03	ci right 1.859662e-03	k: 1213	n:690000
KS ci ratio: 2.263206e+00	ci left: 3.510281e-07	ci right 1.047052e-05	k: 2	n:690000
SYNPO2L   690000 perm   354 sec   (1950 perm/sec)   p_kst 2.898551e-06   p_cons 1.757971e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.269814e-06	k: 0	n:700000
Cons ci ratio: 1.112668e-01	ci left: 1.671495e-03	ci right 1.869808e-03	k: 1238	n:700000
KS ci ratio: 2.263207e+00	ci left: 3.460134e-07	ci right 1.032094e-05	k: 2	n:700000
SYNPO2L   700000 perm   362 sec   (1933 perm/sec)   p_kst 2.857143e-06   p_cons 1.768571e-03   p_joint 0

Joint ci ratio: 3.919994e+00	ci left: 0	ci right 5.195591e-06	k: 0	n:710000
Cons ci ratio: 1.105995e-01	ci left: 1.668493e-03	ci right 1.865185e-03	k: 1253	n:710000
KS ci ratio: 2.263207e+00	ci left: 3.411400e-07	ci right 1.017558e-05	k: 2	n:710000
SYNPO2L   710000 perm   370 sec   (1916 perm/sec)   p_kst 2.816901e-06   p_cons 1.764789e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.123431e-06	k: 0	n:720000
Cons ci ratio: 1.102929e-01	ci left: 1.654772e-03	ci right 1.849272e-03	k: 1260	n:720000
KS ci ratio: 2.263207e+00	ci left: 3.364020e-07	ci right 1.003425e-05	k: 2	n:720000
SYNPO2L   720000 perm   379 sec   (1900 perm/sec)   p_kst 2.777778e-06   p_cons 1.750000e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 5.053247e-06	k: 0	n:730000
Cons ci ratio: 1.094712e-01	ci left: 1.657416e-03	ci right 1.850681e-03	k: 1279	n:730000
KS ci ratio: 2.263207e+00	ci left: 3.317937e-07	ci right 9.896797e-06	k: 2	n:730000
SYNPO2L   730000 perm   387 sec   (1884 perm/sec)   p_kst 2.739726e-06   p_cons 1.752055e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.984960e-06	k: 0	n:740000
Cons ci ratio: 1.085420e-01	ci left: 1.663938e-03	ci right 1.856212e-03	k: 1301	n:740000
KS ci ratio: 2.263207e+00	ci left: 3.273100e-07	ci right 9.763057e-06	k: 2	n:740000
SYNPO2L   740000 perm   396 sec   (1869 perm/sec)   p_kst 2.702703e-06   p_cons 1.758108e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.918494e-06	k: 0	n:750000
Cons ci ratio: 1.080045e-01	ci left: 1.658616e-03	ci right 1.849265e-03	k: 1314	n:750000
KS ci ratio: 2.263207e+00	ci left: 3.229459e-07	ci right 9.632883e-06	k: 2	n:750000
SYNPO2L   750000 perm   405 sec   (1854 perm/sec)   p_kst 2.666667e-06   p_cons 1.752000e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.853777e-06	k: 0	n:760000
Cons ci ratio: 1.072325e-01	ci left: 1.661120e-03	ci right 1.850605e-03	k: 1333	n:760000
KS ci ratio: 2.263207e+00	ci left: 3.186966e-07	ci right 9.506135e-06	k: 2	n:760000
SYNPO2L   760000 perm   413 sec   (1839 perm/sec)   p_kst 2.631579e-06   p_cons 1.753947e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.790741e-06	k: 0	n:770000
Cons ci ratio: 1.066348e-01	ci left: 1.658506e-03	ci right 1.846573e-03	k: 1348	n:770000
KS ci ratio: 2.263207e+00	ci left: 3.145577e-07	ci right 9.382679e-06	k: 2	n:770000
SYNPO2L   770000 perm   422 sec   (1823 perm/sec)   p_kst 2.597403e-06   p_cons 1.750649e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.729321e-06	k: 0	n:780000
Cons ci ratio: 1.061250e-01	ci left: 1.653466e-03	ci right 1.840009e-03	k: 1361	n:780000
KS ci ratio: 2.263207e+00	ci left: 3.105249e-07	ci right 9.262389e-06	k: 2	n:780000
SYNPO2L   780000 perm   431 sec   (1809 perm/sec)   p_kst 2.564103e-06   p_cons 1.744872e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.669457e-06	k: 0	n:790000
Cons ci ratio: 1.055456e-01	ci left: 1.651021e-03	ci right 1.836208e-03	k: 1376	n:790000
KS ci ratio: 2.263207e+00	ci left: 3.065942e-07	ci right 9.145144e-06	k: 2	n:790000
SYNPO2L   790000 perm   440 sec   (1794 perm/sec)   p_kst 2.531646e-06   p_cons 1.741772e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.611089e-06	k: 0	n:800000
Cons ci ratio: 1.051269e-01	ci left: 1.643770e-03	ci right 1.827368e-03	k: 1387	n:800000
KS ci ratio: 2.263207e+00	ci left: 3.027617e-07	ci right 9.030830e-06	k: 2	n:800000
SYNPO2L   800000 perm   449 sec   (1780 perm/sec)   p_kst 2.500000e-06   p_cons 1.733750e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.554162e-06	k: 0	n:810000
Cons ci ratio: 1.043775e-01	ci left: 1.647522e-03	ci right 1.830145e-03	k: 1407	n:810000
KS ci ratio: 2.263207e+00	ci left: 2.990239e-07	ci right 8.919339e-06	k: 2	n:810000
SYNPO2L   810000 perm   459 sec   (1766 perm/sec)   p_kst 2.469136e-06   p_cons 1.737037e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.498623e-06	k: 0	n:820000
Cons ci ratio: 1.037895e-01	ci left: 1.646434e-03	ci right 1.827847e-03	k: 1423	n:820000
KS ci ratio: 2.263208e+00	ci left: 2.953773e-07	ci right 8.810567e-06	k: 2	n:820000
SYNPO2L   820000 perm   468 sec   (1752 perm/sec)   p_kst 2.439024e-06   p_cons 1.735366e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.444423e-06	k: 0	n:830000
Cons ci ratio: 1.031038e-01	ci left: 1.648897e-03	ci right 1.829308e-03	k: 1442	n:830000
KS ci ratio: 1.959994e+00	ci left: 7.453887e-07	ci right 1.056294e-05	k: 3	n:830000
SYNPO2L   830000 perm   478 sec   (1738 perm/sec)   p_kst 3.614458e-06   p_cons 1.737349e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.391514e-06	k: 0	n:840000
Cons ci ratio: 1.027135e-01	ci left: 1.642025e-03	ci right 1.820963e-03	k: 1453	n:840000
KS ci ratio: 1.959994e+00	ci left: 7.365150e-07	ci right 1.043719e-05	k: 3	n:840000
SYNPO2L   840000 perm   487 sec   (1724 perm/sec)   p_kst 3.571429e-06   p_cons 1.729762e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.339849e-06	k: 0	n:850000
Cons ci ratio: 1.018757e-01	ci left: 1.650220e-03	ci right 1.828497e-03	k: 1477	n:850000
KS ci ratio: 1.959994e+00	ci left: 7.278501e-07	ci right 1.031440e-05	k: 3	n:850000
SYNPO2L   850000 perm   497 sec   (1711 perm/sec)   p_kst 3.529412e-06   p_cons 1.737647e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.289386e-06	k: 0	n:860000
Cons ci ratio: 1.013628e-01	ci left: 1.648030e-03	ci right 1.825120e-03	k: 1492	n:860000
KS ci ratio: 1.959994e+00	ci left: 7.193868e-07	ci right 1.019447e-05	k: 3	n:860000
SYNPO2L   860000 perm   507 sec   (1697 perm/sec)   p_kst 3.488372e-06   p_cons 1.734884e-03   p_joint 0

Joint ci ratio: 3.919995e+00	ci left: 0	ci right 4.240082e-06	k: 0	n:870000
Cons ci ratio: 1.006239e-01	ci left: 1.653736e-03	ci right 1.830068e-03	k: 1514	n:870000
KS ci ratio: 1.959994e+00	ci left: 7.111179e-07	ci right 1.007729e-05	k: 3	n:870000
SYNPO2L   870000 perm   516 sec   (1685 perm/sec)   p_kst 3.448276e-06   p_cons 1.740230e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.191900e-06	k: 0	n:880000
Cons ci ratio: 1.001952e-01	ci left: 1.649345e-03	ci right 1.824415e-03	k: 1527	n:880000
KS ci ratio: 1.959994e+00	ci left: 7.030371e-07	ci right 9.962778e-06	k: 3	n:880000
SYNPO2L   880000 perm   526 sec   (1672 perm/sec)   p_kst 3.409091e-06   p_cons 1.735227e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.144800e-06	k: 0	n:890000
Cons ci ratio: 9.973948e-02	ci left: 1.646150e-03	ci right 1.820040e-03	k: 1541	n:890000
KS ci ratio: 1.753071e+00	ci left: 1.224569e-06	ci right 1.150736e-05	k: 4	n:890000
SYNPO2L   890000 perm   536 sec   (1660 perm/sec)   p_kst 4.494382e-06   p_cons 1.731461e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.098747e-06	k: 0	n:900000
Cons ci ratio: 9.922609e-02	ci left: 1.645195e-03	ci right 1.818037e-03	k: 1557	n:900000
KS ci ratio: 1.753071e+00	ci left: 1.210963e-06	ci right 1.137950e-05	k: 4	n:900000
SYNPO2L   900000 perm   546 sec   (1648 perm/sec)   p_kst 4.444444e-06   p_cons 1.730000e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.053705e-06	k: 0	n:910000
Cons ci ratio: 9.853260e-02	ci left: 1.650694e-03	ci right 1.822832e-03	k: 1579	n:910000
KS ci ratio: 1.753072e+00	ci left: 1.197656e-06	ci right 1.125445e-05	k: 4	n:910000
SYNPO2L   910000 perm   556 sec   (1636 perm/sec)   p_kst 4.395604e-06   p_cons 1.735165e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 4.009644e-06	k: 0	n:920000
Cons ci ratio: 9.794536e-02	ci left: 1.652897e-03	ci right 1.824178e-03	k: 1598	n:920000
KS ci ratio: 1.753072e+00	ci left: 1.184638e-06	ci right 1.113212e-05	k: 4	n:920000
SYNPO2L   920000 perm   566 sec   (1625 perm/sec)   p_kst 4.347826e-06   p_cons 1.736957e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.966529e-06	k: 0	n:930000
Cons ci ratio: 9.742883e-02	ci left: 1.652957e-03	ci right 1.823289e-03	k: 1615	n:930000
KS ci ratio: 1.753072e+00	ci left: 1.171899e-06	ci right 1.101242e-05	k: 4	n:930000
SYNPO2L   930000 perm   576 sec   (1614 perm/sec)   p_kst 4.301075e-06   p_cons 1.736559e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.924332e-06	k: 0	n:940000
Cons ci ratio: 9.689068e-02	ci left: 1.654056e-03	ci right 1.823506e-03	k: 1633	n:940000
KS ci ratio: 1.753072e+00	ci left: 1.159432e-06	ci right 1.089527e-05	k: 4	n:940000
SYNPO2L   940000 perm   587 sec   (1602 perm/sec)   p_kst 4.255319e-06   p_cons 1.737234e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.883023e-06	k: 0	n:950000
Cons ci ratio: 9.636135e-02	ci left: 1.655134e-03	ci right 1.823717e-03	k: 1651	n:950000
KS ci ratio: 1.753072e+00	ci left: 1.147228e-06	ci right 1.078058e-05	k: 4	n:950000
SYNPO2L   950000 perm   597 sec   (1592 perm/sec)   p_kst 4.210526e-06   p_cons 1.737895e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.842575e-06	k: 0	n:960000
Cons ci ratio: 9.589814e-02	ci left: 1.654159e-03	ci right 1.821787e-03	k: 1667	n:960000
KS ci ratio: 1.753072e+00	ci left: 1.135278e-06	ci right 1.066829e-05	k: 4	n:960000
SYNPO2L   960000 perm   607 sec   (1581 perm/sec)   p_kst 4.166667e-06   p_cons 1.736458e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.802961e-06	k: 0	n:970000
Cons ci ratio: 9.552683e-02	ci left: 1.650187e-03	ci right 1.816729e-03	k: 1680	n:970000
KS ci ratio: 1.753072e+00	ci left: 1.123574e-06	ci right 1.055830e-05	k: 4	n:970000
SYNPO2L   970000 perm   618 sec   (1570 perm/sec)   p_kst 4.123711e-06   p_cons 1.731959e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.764156e-06	k: 0	n:980000
Cons ci ratio: 9.510357e-02	ci left: 1.648290e-03	ci right 1.813861e-03	k: 1695	n:980000
KS ci ratio: 1.753072e+00	ci left: 1.112109e-06	ci right 1.045057e-05	k: 4	n:980000
SYNPO2L   980000 perm   628 sec   (1560 perm/sec)   p_kst 4.081633e-06   p_cons 1.729592e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.726134e-06	k: 0	n:990000
Cons ci ratio: 9.457520e-02	ci left: 1.650377e-03	ci right 1.815186e-03	k: 1714	n:990000
KS ci ratio: 1.753072e+00	ci left: 1.100875e-06	ci right 1.034501e-05	k: 4	n:990000
SYNPO2L   990000 perm   639 sec   (1550 perm/sec)   p_kst 4.040404e-06   p_cons 1.731313e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.688873e-06	k: 0	n:1000000
Cons ci ratio: 9.421899e-02	ci left: 1.646566e-03	ci right 1.810342e-03	k: 1727	n:1000000
KS ci ratio: 1.753072e+00	ci left: 1.089866e-06	ci right 1.024156e-05	k: 4	n:1000000
SYNPO2L   1000000 perm   650 sec   (1539 perm/sec)   p_kst 4.000000e-06   p_cons 1.727000e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.652349e-06	k: 0	n:1010000
Cons ci ratio: 9.365147e-02	ci left: 1.650567e-03	ci right 1.813698e-03	k: 1748	n:1010000
KS ci ratio: 1.753072e+00	ci left: 1.079076e-06	ci right 1.014016e-05	k: 4	n:1010000
SYNPO2L   1010000 perm   661 sec   (1529 perm/sec)   p_kst 3.960396e-06   p_cons 1.730693e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.616542e-06	k: 0	n:1020000
Cons ci ratio: 9.317321e-02	ci left: 1.651620e-03	ci right 1.813975e-03	k: 1766	n:1020000
KS ci ratio: 1.753072e+00	ci left: 1.068496e-06	ci right 1.004074e-05	k: 4	n:1020000
SYNPO2L   1020000 perm   672 sec   (1519 perm/sec)   p_kst 3.921569e-06   p_cons 1.731373e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.581430e-06	k: 0	n:1030000
Cons ci ratio: 9.283255e-02	ci left: 1.647913e-03	ci right 1.809279e-03	k: 1779	n:1030000
KS ci ratio: 1.753072e+00	ci left: 1.058123e-06	ci right 9.943260e-06	k: 4	n:1030000
SYNPO2L   1030000 perm   683 sec   (1509 perm/sec)   p_kst 3.883495e-06   p_cons 1.727184e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.546993e-06	k: 0	n:1040000
Cons ci ratio: 9.236667e-02	ci left: 1.648974e-03	ci right 1.809590e-03	k: 1797	n:1040000
KS ci ratio: 1.753072e+00	ci left: 1.047948e-06	ci right 9.847652e-06	k: 4	n:1040000
SYNPO2L   1040000 perm   694 sec   (1498 perm/sec)   p_kst 3.846154e-06   p_cons 1.727885e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.513212e-06	k: 0	n:1050000
Cons ci ratio: 9.190773e-02	ci left: 1.650018e-03	ci right 1.809894e-03	k: 1815	n:1050000
KS ci ratio: 1.753072e+00	ci left: 1.037968e-06	ci right 9.753865e-06	k: 4	n:1050000
SYNPO2L   1050000 perm   705 sec   (1489 perm/sec)   p_kst 3.809524e-06   p_cons 1.728571e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.480069e-06	k: 0	n:1060000
Cons ci ratio: 9.125641e-02	ci left: 1.658418e-03	ci right 1.817909e-03	k: 1841	n:1060000
KS ci ratio: 1.753072e+00	ci left: 1.028176e-06	ci right 9.661848e-06	k: 4	n:1060000
SYNPO2L   1060000 perm   717 sec   (1479 perm/sec)   p_kst 3.773585e-06   p_cons 1.736792e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.447545e-06	k: 0	n:1070000
Cons ci ratio: 9.083821e-02	ci left: 1.658445e-03	ci right 1.817169e-03	k: 1858	n:1070000
KS ci ratio: 1.753072e+00	ci left: 1.018567e-06	ci right 9.571550e-06	k: 4	n:1070000
SYNPO2L   1070000 perm   728 sec   (1470 perm/sec)   p_kst 3.738318e-06   p_cons 1.736449e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.415623e-06	k: 0	n:1080000
Cons ci ratio: 9.057091e-02	ci left: 1.653043e-03	ci right 1.810760e-03	k: 1869	n:1080000
KS ci ratio: 1.753072e+00	ci left: 1.009135e-06	ci right 9.482925e-06	k: 4	n:1080000
SYNPO2L   1080000 perm   739 sec   (1461 perm/sec)   p_kst 3.703704e-06   p_cons 1.730556e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.384287e-06	k: 0	n:1090000
Cons ci ratio: 9.023391e-02	ci left: 1.650431e-03	ci right 1.807282e-03	k: 1883	n:1090000
KS ci ratio: 1.753072e+00	ci left: 9.998774e-07	ci right 9.395926e-06	k: 4	n:1090000
SYNPO2L   1090000 perm   751 sec   (1452 perm/sec)   p_kst 3.669725e-06   p_cons 1.727523e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.353521e-06	k: 0	n:1100000
Cons ci ratio: 8.987692e-02	ci left: 1.648756e-03	ci right 1.804795e-03	k: 1898	n:1100000
KS ci ratio: 1.753073e+00	ci left: 9.907876e-07	ci right 9.310509e-06	k: 4	n:1100000
SYNPO2L   1100000 perm   762 sec   (1443 perm/sec)   p_kst 3.636364e-06   p_cons 1.725455e-03   p_joint 0

Joint ci ratio: 3.919996e+00	ci left: 0	ci right 3.323309e-06	k: 0	n:1110000
Cons ci ratio: 8.954757e-02	ci left: 1.646232e-03	ci right 1.801431e-03	k: 1912	n:1110000
KS ci ratio: 1.753073e+00	ci left: 9.818615e-07	ci right 9.226631e-06	k: 4	n:1110000
SYNPO2L   1110000 perm   774 sec   (1434 perm/sec)   p_kst 3.603604e-06   p_cons 1.722523e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.293637e-06	k: 0	n:1120000
Cons ci ratio: 8.922182e-02	ci left: 1.643754e-03	ci right 1.798127e-03	k: 1926	n:1120000
KS ci ratio: 1.753073e+00	ci left: 9.730949e-07	ci right 9.144250e-06	k: 4	n:1120000
SYNPO2L   1120000 perm   786 sec   (1425 perm/sec)   p_kst 3.571429e-06   p_cons 1.719643e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.264490e-06	k: 0	n:1130000
Cons ci ratio: 8.885375e-02	ci left: 1.643052e-03	ci right 1.796689e-03	k: 1942	n:1130000
KS ci ratio: 1.753073e+00	ci left: 9.644834e-07	ci right 9.063328e-06	k: 4	n:1130000
SYNPO2L   1130000 perm   798 sec   (1416 perm/sec)   p_kst 3.539823e-06   p_cons 1.718584e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.235854e-06	k: 0	n:1140000
Cons ci ratio: 8.842241e-02	ci left: 1.644936e-03	ci right 1.797964e-03	k: 1961	n:1140000
KS ci ratio: 1.753073e+00	ci left: 9.560231e-07	ci right 8.983825e-06	k: 4	n:1140000
SYNPO2L   1140000 perm   811 sec   (1406 perm/sec)   p_kst 3.508772e-06   p_cons 1.720175e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.207716e-06	k: 0	n:1150000
Cons ci ratio: 8.806410e-02	ci left: 1.644238e-03	ci right 1.796550e-03	k: 1977	n:1150000
KS ci ratio: 1.753073e+00	ci left: 9.477098e-07	ci right 8.905705e-06	k: 4	n:1150000
SYNPO2L   1150000 perm   823 sec   (1398 perm/sec)   p_kst 3.478261e-06   p_cons 1.719130e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.180063e-06	k: 0	n:1160000
Cons ci ratio: 8.749063e-02	ci left: 1.651986e-03	ci right 1.803967e-03	k: 2003	n:1160000
KS ci ratio: 1.753073e+00	ci left: 9.395399e-07	ci right 8.828932e-06	k: 4	n:1160000
SYNPO2L   1160000 perm   835 sec   (1389 perm/sec)   p_kst 3.448276e-06   p_cons 1.726724e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.152883e-06	k: 0	n:1170000
Cons ci ratio: 8.707874e-02	ci left: 1.653751e-03	ci right 1.805143e-03	k: 2022	n:1170000
KS ci ratio: 1.753073e+00	ci left: 9.315096e-07	ci right 8.753471e-06	k: 4	n:1170000
SYNPO2L   1170000 perm   848 sec   (1380 perm/sec)   p_kst 3.418803e-06   p_cons 1.728205e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.126164e-06	k: 0	n:1180000
Cons ci ratio: 8.667262e-02	ci left: 1.655489e-03	ci right 1.806296e-03	k: 2041	n:1180000
KS ci ratio: 1.753073e+00	ci left: 9.236155e-07	ci right 8.679289e-06	k: 4	n:1180000
SYNPO2L   1180000 perm   860 sec   (1372 perm/sec)   p_kst 3.389831e-06   p_cons 1.729661e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.099894e-06	k: 0	n:1190000
Cons ci ratio: 8.614660e-02	ci left: 1.662132e-03	ci right 1.812579e-03	k: 2066	n:1190000
KS ci ratio: 1.753073e+00	ci left: 9.158540e-07	ci right 8.606354e-06	k: 4	n:1190000
SYNPO2L   1190000 perm   873 sec   (1363 perm/sec)   p_kst 3.361345e-06   p_cons 1.736134e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.074061e-06	k: 0	n:1200000
Cons ci ratio: 8.583580e-02	ci left: 1.660512e-03	ci right 1.810243e-03	k: 2081	n:1200000
KS ci ratio: 1.600329e+00	ci left: 1.352907e-06	ci right 9.723583e-06	k: 5	n:1200000
SYNPO2L   1200000 perm   885 sec   (1355 perm/sec)   p_kst 4.166667e-06   p_cons 1.734167e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.048656e-06	k: 0	n:1210000
Cons ci ratio: 8.548751e-02	ci left: 1.660537e-03	ci right 1.809633e-03	k: 2098	n:1210000
KS ci ratio: 1.600329e+00	ci left: 1.341726e-06	ci right 9.643223e-06	k: 5	n:1210000
SYNPO2L   1210000 perm   898 sec   (1347 perm/sec)   p_kst 4.132231e-06   p_cons 1.733884e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 3.023667e-06	k: 0	n:1220000
Cons ci ratio: 8.516358e-02	ci left: 1.659761e-03	ci right 1.808194e-03	k: 2114	n:1220000
KS ci ratio: 1.600329e+00	ci left: 1.330728e-06	ci right 9.564180e-06	k: 5	n:1220000
SYNPO2L   1220000 perm   911 sec   (1340 perm/sec)   p_kst 4.098361e-06   p_cons 1.732787e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.999084e-06	k: 0	n:1230000
Cons ci ratio: 8.488323e-02	ci left: 1.657407e-03	ci right 1.805118e-03	k: 2128	n:1230000
KS ci ratio: 1.600329e+00	ci left: 1.319909e-06	ci right 9.486423e-06	k: 5	n:1230000
SYNPO2L   1230000 perm   924 sec   (1332 perm/sec)   p_kst 4.065041e-06   p_cons 1.730081e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.974898e-06	k: 0	n:1240000
Cons ci ratio: 8.450692e-02	ci left: 1.659039e-03	ci right 1.806207e-03	k: 2147	n:1240000
KS ci ratio: 1.600329e+00	ci left: 1.309264e-06	ci right 9.409920e-06	k: 5	n:1240000
SYNPO2L   1240000 perm   937 sec   (1324 perm/sec)   p_kst 4.032258e-06   p_cons 1.731452e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.951099e-06	k: 0	n:1250000
Cons ci ratio: 8.415503e-02	ci left: 1.659863e-03	ci right 1.806461e-03	k: 2165	n:1250000
KS ci ratio: 1.600329e+00	ci left: 1.298790e-06	ci right 9.334641e-06	k: 5	n:1250000
SYNPO2L   1250000 perm   950 sec   (1316 perm/sec)   p_kst 4.000000e-06   p_cons 1.732000e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.927678e-06	k: 0	n:1260000
Cons ci ratio: 8.382672e-02	ci left: 1.659898e-03	ci right 1.805900e-03	k: 2182	n:1260000
KS ci ratio: 1.600329e+00	ci left: 1.288482e-06	ci right 9.260557e-06	k: 5	n:1260000
SYNPO2L   1260000 perm   963 sec   (1308 perm/sec)   p_kst 3.968254e-06   p_cons 1.731746e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.904625e-06	k: 0	n:1270000
Cons ci ratio: 8.354028e-02	ci left: 1.658392e-03	ci right 1.803738e-03	k: 2197	n:1270000
KS ci ratio: 1.600329e+00	ci left: 1.278337e-06	ci right 9.187639e-06	k: 5	n:1270000
SYNPO2L   1270000 perm   976 sec   (1301 perm/sec)   p_kst 3.937008e-06   p_cons 1.729921e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.881933e-06	k: 0	n:1280000
Cons ci ratio: 8.305024e-02	ci left: 1.665325e-03	ci right 1.810382e-03	k: 2223	n:1280000
KS ci ratio: 1.600329e+00	ci left: 1.268350e-06	ci right 9.115861e-06	k: 5	n:1280000
SYNPO2L   1280000 perm   990 sec   (1293 perm/sec)   p_kst 3.906250e-06   p_cons 1.736719e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.859592e-06	k: 0	n:1290000
Cons ci ratio: 8.269769e-02	ci left: 1.666839e-03	ci right 1.811382e-03	k: 2242	n:1290000
KS ci ratio: 1.600329e+00	ci left: 1.258518e-06	ci right 9.045195e-06	k: 5	n:1290000
SYNPO2L   1290000 perm   1003 sec   (1286 perm/sec)   p_kst 3.875969e-06   p_cons 1.737984e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.837596e-06	k: 0	n:1300000
Cons ci ratio: 8.236783e-02	ci left: 1.667578e-03	ci right 1.811580e-03	k: 2260	n:1300000
KS ci ratio: 1.600329e+00	ci left: 1.248837e-06	ci right 8.975617e-06	k: 5	n:1300000
SYNPO2L   1300000 perm   1017 sec   (1278 perm/sec)   p_kst 3.846154e-06   p_cons 1.738462e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.815935e-06	k: 0	n:1310000
Cons ci ratio: 8.202386e-02	ci left: 1.669054e-03	ci right 1.812553e-03	k: 2279	n:1310000
KS ci ratio: 1.600329e+00	ci left: 1.239304e-06	ci right 8.907101e-06	k: 5	n:1310000
SYNPO2L   1310000 perm   1031 sec   (1271 perm/sec)   p_kst 3.816794e-06   p_cons 1.739695e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.794602e-06	k: 0	n:1320000
Cons ci ratio: 8.173761e-02	ci left: 1.668283e-03	ci right 1.811191e-03	k: 2295	n:1320000
KS ci ratio: 1.600329e+00	ci left: 1.229915e-06	ci right 8.839623e-06	k: 5	n:1320000
SYNPO2L   1320000 perm   1044 sec   (1264 perm/sec)   p_kst 3.787879e-06   p_cons 1.738636e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.773590e-06	k: 0	n:1330000
Cons ci ratio: 8.127844e-02	ci left: 1.674890e-03	ci right 1.817520e-03	k: 2321	n:1330000
KS ci ratio: 1.600329e+00	ci left: 1.220668e-06	ci right 8.773160e-06	k: 5	n:1330000
SYNPO2L   1330000 perm   1058 sec   (1257 perm/sec)   p_kst 3.759398e-06   p_cons 1.745113e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.752891e-06	k: 0	n:1340000
Cons ci ratio: 8.091327e-02	ci left: 1.677745e-03	ci right 1.819945e-03	k: 2342	n:1340000
KS ci ratio: 1.600329e+00	ci left: 1.211558e-06	ci right 8.707689e-06	k: 5	n:1340000
SYNPO2L   1340000 perm   1072 sec   (1250 perm/sec)   p_kst 3.731343e-06   p_cons 1.747761e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.732500e-06	k: 0	n:1350000
Cons ci ratio: 8.053591e-02	ci left: 1.681284e-03	ci right 1.823089e-03	k: 2364	n:1350000
KS ci ratio: 1.600329e+00	ci left: 1.202584e-06	ci right 8.643188e-06	k: 5	n:1350000
SYNPO2L   1350000 perm   1086 sec   (1243 perm/sec)   p_kst 3.703704e-06   p_cons 1.751111e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.712408e-06	k: 0	n:1360000
Cons ci ratio: 8.031561e-02	ci left: 1.678288e-03	ci right 1.819435e-03	k: 2377	n:1360000
KS ci ratio: 1.600329e+00	ci left: 1.193741e-06	ci right 8.579635e-06	k: 5	n:1360000
SYNPO2L   1360000 perm   1100 sec   (1236 perm/sec)   p_kst 3.676471e-06   p_cons 1.747794e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.692609e-06	k: 0	n:1370000
Cons ci ratio: 8.004681e-02	ci left: 1.677483e-03	ci right 1.818068e-03	k: 2393	n:1370000
KS ci ratio: 1.600329e+00	ci left: 1.185028e-06	ci right 8.517010e-06	k: 5	n:1370000
SYNPO2L   1370000 perm   1114 sec   (1230 perm/sec)   p_kst 3.649635e-06   p_cons 1.746715e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.673097e-06	k: 0	n:1380000
Cons ci ratio: 7.973100e-02	ci left: 1.678820e-03	ci right 1.818936e-03	k: 2412	n:1380000
KS ci ratio: 1.600329e+00	ci left: 1.176440e-06	ci right 8.455293e-06	k: 5	n:1380000
SYNPO2L   1380000 perm   1128 sec   (1223 perm/sec)   p_kst 3.623188e-06   p_cons 1.747826e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.653867e-06	k: 0	n:1390000
Cons ci ratio: 7.940255e-02	ci left: 1.680845e-03	ci right 1.820525e-03	k: 2432	n:1390000
KS ci ratio: 1.600329e+00	ci left: 1.167977e-06	ci right 8.394463e-06	k: 5	n:1390000
SYNPO2L   1390000 perm   1142 sec   (1217 perm/sec)   p_kst 3.597122e-06   p_cons 1.749640e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.634910e-06	k: 0	n:1400000
Cons ci ratio: 7.904585e-02	ci left: 1.684242e-03	ci right 1.823547e-03	k: 2454	n:1400000
KS ci ratio: 1.600329e+00	ci left: 1.159634e-06	ci right 8.334503e-06	k: 5	n:1400000
SYNPO2L   1400000 perm   1157 sec   (1210 perm/sec)   p_kst 3.571429e-06   p_cons 1.752857e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.616223e-06	k: 0	n:1410000
Cons ci ratio: 7.864621e-02	ci left: 1.689678e-03	ci right 1.828694e-03	k: 2479	n:1410000
KS ci ratio: 1.600329e+00	ci left: 1.151410e-06	ci right 8.275393e-06	k: 5	n:1410000
SYNPO2L   1410000 perm   1172 sec   (1203 perm/sec)   p_kst 3.546099e-06   p_cons 1.758156e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.597799e-06	k: 0	n:1420000
Cons ci ratio: 7.844102e-02	ci left: 1.686754e-03	ci right 1.825150e-03	k: 2492	n:1420000
KS ci ratio: 1.600329e+00	ci left: 1.143301e-06	ci right 8.217116e-06	k: 5	n:1420000
SYNPO2L   1420000 perm   1187 sec   (1196 perm/sec)   p_kst 3.521127e-06   p_cons 1.754930e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.579633e-06	k: 0	n:1430000
Cons ci ratio: 7.817494e-02	ci left: 1.686613e-03	ci right 1.824508e-03	k: 2509	n:1430000
KS ci ratio: 1.600329e+00	ci left: 1.135306e-06	ci right 8.159654e-06	k: 5	n:1430000
SYNPO2L   1430000 perm   1201 sec   (1190 perm/sec)   p_kst 3.496503e-06   p_cons 1.754545e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.561719e-06	k: 0	n:1440000
Cons ci ratio: 7.792701e-02	ci left: 1.685795e-03	ci right 1.823166e-03	k: 2525	n:1440000
KS ci ratio: 1.600329e+00	ci left: 1.127422e-06	ci right 8.102990e-06	k: 5	n:1440000
SYNPO2L   1440000 perm   1216 sec   (1184 perm/sec)   p_kst 3.472222e-06   p_cons 1.753472e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.544052e-06	k: 0	n:1450000
Cons ci ratio: 7.758974e-02	ci left: 1.689046e-03	ci right 1.826059e-03	k: 2547	n:1450000
KS ci ratio: 1.600329e+00	ci left: 1.119647e-06	ci right 8.047107e-06	k: 5	n:1450000
SYNPO2L   1450000 perm   1231 sec   (1178 perm/sec)   p_kst 3.448276e-06   p_cons 1.756552e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.526627e-06	k: 0	n:1460000
Cons ci ratio: 7.731711e-02	ci left: 1.689568e-03	ci right 1.826120e-03	k: 2565	n:1460000
KS ci ratio: 1.600329e+00	ci left: 1.111978e-06	ci right 7.991990e-06	k: 5	n:1460000
SYNPO2L   1460000 perm   1245 sec   (1172 perm/sec)   p_kst 3.424658e-06   p_cons 1.756849e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.509439e-06	k: 0	n:1470000
Cons ci ratio: 7.712212e-02	ci left: 1.686747e-03	ci right 1.822711e-03	k: 2578	n:1470000
KS ci ratio: 1.600329e+00	ci left: 1.104413e-06	ci right 7.937623e-06	k: 5	n:1470000
SYNPO2L   1470000 perm   1260 sec   (1166 perm/sec)   p_kst 3.401361e-06   p_cons 1.753741e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.492483e-06	k: 0	n:1480000
Cons ci ratio: 7.682474e-02	ci left: 1.688603e-03	ci right 1.824169e-03	k: 2598	n:1480000
KS ci ratio: 1.600330e+00	ci left: 1.096951e-06	ci right 7.883990e-06	k: 5	n:1480000
SYNPO2L   1480000 perm   1276 sec   (1160 perm/sec)   p_kst 3.378378e-06   p_cons 1.755405e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.475755e-06	k: 0	n:1490000
Cons ci ratio: 7.653078e-02	ci left: 1.690436e-03	ci right 1.825607e-03	k: 2618	n:1490000
KS ci ratio: 1.600330e+00	ci left: 1.089589e-06	ci right 7.831078e-06	k: 5	n:1490000
SYNPO2L   1490000 perm   1291 sec   (1154 perm/sec)   p_kst 3.355705e-06   p_cons 1.757047e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.459250e-06	k: 0	n:1500000
Cons ci ratio: 7.632714e-02	ci left: 1.688321e-03	ci right 1.822948e-03	k: 2632	n:1500000
KS ci ratio: 1.600330e+00	ci left: 1.082325e-06	ci right 7.778871e-06	k: 5	n:1500000
SYNPO2L   1500000 perm   1306 sec   (1148 perm/sec)   p_kst 3.333333e-06   p_cons 1.754667e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.442964e-06	k: 0	n:1510000
Cons ci ratio: 7.612512e-02	ci left: 1.686235e-03	ci right 1.820323e-03	k: 2646	n:1510000
KS ci ratio: 1.600330e+00	ci left: 1.075157e-06	ci right 7.727355e-06	k: 5	n:1510000
SYNPO2L   1510000 perm   1322 sec   (1142 perm/sec)   p_kst 3.311258e-06   p_cons 1.752318e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.426891e-06	k: 0	n:1520000
Cons ci ratio: 7.595328e-02	ci left: 1.682886e-03	ci right 1.816393e-03	k: 2658	n:1520000
KS ci ratio: 1.600330e+00	ci left: 1.068084e-06	ci right 7.676517e-06	k: 5	n:1520000
SYNPO2L   1520000 perm   1337 sec   (1137 perm/sec)   p_kst 3.289474e-06   p_cons 1.748684e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.411029e-06	k: 0	n:1530000
Cons ci ratio: 7.559854e-02	ci left: 1.687917e-03	ci right 1.821170e-03	k: 2683	n:1530000
KS ci ratio: 1.600330e+00	ci left: 1.061103e-06	ci right 7.626344e-06	k: 5	n:1530000
SYNPO2L   1530000 perm   1353 sec   (1131 perm/sec)   p_kst 3.267974e-06   p_cons 1.753595e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.395373e-06	k: 0	n:1540000
Cons ci ratio: 7.531838e-02	ci left: 1.689698e-03	ci right 1.822576e-03	k: 2703	n:1540000
KS ci ratio: 1.600330e+00	ci left: 1.054213e-06	ci right 7.576823e-06	k: 5	n:1540000
SYNPO2L   1540000 perm   1369 sec   (1125 perm/sec)   p_kst 3.246753e-06   p_cons 1.755195e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.379919e-06	k: 0	n:1550000
Cons ci ratio: 7.513809e-02	ci left: 1.687026e-03	ci right 1.819363e-03	k: 2716	n:1550000
KS ci ratio: 1.600330e+00	ci left: 1.047411e-06	ci right 7.527940e-06	k: 5	n:1550000
SYNPO2L   1550000 perm   1385 sec   (1119 perm/sec)   p_kst 3.225806e-06   p_cons 1.752258e-03   p_joint 0

Joint ci ratio: 3.919997e+00	ci left: 0	ci right 2.364664e-06	k: 0	n:1560000
Cons ci ratio: 7.490413e-02	ci left: 1.686905e-03	ci right 1.818802e-03	k: 2733	n:1560000
KS ci ratio: 1.600330e+00	ci left: 1.040697e-06	ci right 7.479684e-06	k: 5	n:1560000
SYNPO2L   1560000 perm   1401 sec   (1113 perm/sec)   p_kst 3.205128e-06   p_cons 1.751923e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.349602e-06	k: 0	n:1570000
Cons ci ratio: 7.461802e-02	ci left: 1.689286e-03	ci right 1.820843e-03	k: 2754	n:1570000
KS ci ratio: 1.600330e+00	ci left: 1.034069e-06	ci right 7.432043e-06	k: 5	n:1570000
SYNPO2L   1570000 perm   1417 sec   (1108 perm/sec)   p_kst 3.184713e-06   p_cons 1.754140e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.334731e-06	k: 0	n:1580000
Cons ci ratio: 7.438888e-02	ci left: 1.689154e-03	ci right 1.820278e-03	k: 2771	n:1580000
KS ci ratio: 1.600330e+00	ci left: 1.027524e-06	ci right 7.385005e-06	k: 5	n:1580000
SYNPO2L   1580000 perm   1433 sec   (1103 perm/sec)   p_kst 3.164557e-06   p_cons 1.753797e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.320047e-06	k: 0	n:1590000
Cons ci ratio: 7.414852e-02	ci left: 1.689641e-03	ci right 1.820361e-03	k: 2789	n:1590000
KS ci ratio: 1.600330e+00	ci left: 1.021061e-06	ci right 7.338558e-06	k: 5	n:1590000
SYNPO2L   1590000 perm   1449 sec   (1097 perm/sec)   p_kst 3.144654e-06   p_cons 1.754088e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.305547e-06	k: 0	n:1600000
Cons ci ratio: 7.393685e-02	ci left: 1.688895e-03	ci right 1.819169e-03	k: 2805	n:1600000
KS ci ratio: 1.600330e+00	ci left: 1.014680e-06	ci right 7.292692e-06	k: 5	n:1600000
SYNPO2L   1600000 perm   1465 sec   (1092 perm/sec)   p_kst 3.125000e-06   p_cons 1.753125e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.291227e-06	k: 0	n:1610000
Cons ci ratio: 7.364860e-02	ci left: 1.691818e-03	ci right 1.821786e-03	k: 2827	n:1610000
KS ci ratio: 1.600330e+00	ci left: 1.008377e-06	ci right 7.247396e-06	k: 5	n:1610000
SYNPO2L   1610000 perm   1482 sec   (1086 perm/sec)   p_kst 3.105590e-06   p_cons 1.755901e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.277083e-06	k: 0	n:1620000
Cons ci ratio: 7.338949e-02	ci left: 1.693493e-03	ci right 1.823113e-03	k: 2847	n:1620000
KS ci ratio: 1.600330e+00	ci left: 1.002153e-06	ci right 7.202659e-06	k: 5	n:1620000
SYNPO2L   1620000 perm   1498 sec   (1081 perm/sec)   p_kst 3.086420e-06   p_cons 1.757407e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.263114e-06	k: 0	n:1630000
Cons ci ratio: 7.322266e-02	ci left: 1.690933e-03	ci right 1.820050e-03	k: 2860	n:1630000
KS ci ratio: 1.600330e+00	ci left: 9.960046e-07	ci right 7.158471e-06	k: 5	n:1630000
SYNPO2L   1630000 perm   1514 sec   (1076 perm/sec)   p_kst 3.067485e-06   p_cons 1.754601e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.249314e-06	k: 0	n:1640000
Cons ci ratio: 7.301881e-02	ci left: 1.690200e-03	ci right 1.818887e-03	k: 2876	n:1640000
KS ci ratio: 1.600330e+00	ci left: 9.899314e-07	ci right 7.114822e-06	k: 5	n:1640000
SYNPO2L   1640000 perm   1531 sec   (1071 perm/sec)   p_kst 3.048780e-06   p_cons 1.753659e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.235682e-06	k: 0	n:1650000
Cons ci ratio: 7.285449e-02	ci left: 1.687691e-03	ci right 1.815886e-03	k: 2889	n:1650000
KS ci ratio: 1.600330e+00	ci left: 9.839319e-07	ci right 7.071702e-06	k: 5	n:1650000
SYNPO2L   1650000 perm   1548 sec   (1066 perm/sec)   p_kst 3.030303e-06   p_cons 1.750909e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.222214e-06	k: 0	n:1660000
Cons ci ratio: 7.257867e-02	ci left: 1.690537e-03	ci right 1.818441e-03	k: 2911	n:1660000
KS ci ratio: 1.600330e+00	ci left: 9.780045e-07	ci right 7.029102e-06	k: 5	n:1660000
SYNPO2L   1660000 perm   1564 sec   (1061 perm/sec)   p_kst 3.012048e-06   p_cons 1.753614e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.208907e-06	k: 0	n:1670000
Cons ci ratio: 7.234301e-02	ci left: 1.691585e-03	ci right 1.819135e-03	k: 2930	n:1670000
KS ci ratio: 1.600330e+00	ci left: 9.721482e-07	ci right 6.987011e-06	k: 5	n:1670000
SYNPO2L   1670000 perm   1581 sec   (1056 perm/sec)   p_kst 2.994012e-06   p_cons 1.754491e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.195759e-06	k: 0	n:1680000
Cons ci ratio: 7.212188e-02	ci left: 1.692037e-03	ci right 1.819215e-03	k: 2948	n:1680000
KS ci ratio: 1.600330e+00	ci left: 9.663616e-07	ci right 6.945422e-06	k: 5	n:1680000
SYNPO2L   1680000 perm   1598 sec   (1052 perm/sec)   p_kst 2.976190e-06   p_cons 1.754762e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.182767e-06	k: 0	n:1690000
Cons ci ratio: 7.187850e-02	ci left: 1.693646e-03	ci right 1.820497e-03	k: 2968	n:1690000
KS ci ratio: 1.600330e+00	ci left: 9.606435e-07	ci right 6.904325e-06	k: 5	n:1690000
SYNPO2L   1690000 perm   1615 sec   (1047 perm/sec)   p_kst 2.958580e-06   p_cons 1.756213e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.169927e-06	k: 0	n:1700000
Cons ci ratio: 7.163757e-02	ci left: 1.695237e-03	ci right 1.821764e-03	k: 2988	n:1700000
KS ci ratio: 1.600330e+00	ci left: 9.549927e-07	ci right 6.863711e-06	k: 5	n:1700000
SYNPO2L   1700000 perm   1632 sec   (1042 perm/sec)   p_kst 2.941176e-06   p_cons 1.757647e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.157237e-06	k: 0	n:1710000
Cons ci ratio: 7.145855e-02	ci left: 1.693938e-03	ci right 1.820040e-03	k: 3003	n:1710000
KS ci ratio: 1.600330e+00	ci left: 9.494079e-07	ci right 6.823573e-06	k: 5	n:1710000
SYNPO2L   1710000 perm   1649 sec   (1037 perm/sec)   p_kst 2.923977e-06   p_cons 1.756140e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.144695e-06	k: 0	n:1720000
Cons ci ratio: 7.130452e-02	ci left: 1.691513e-03	ci right 1.817151e-03	k: 3016	n:1720000
KS ci ratio: 1.600330e+00	ci left: 9.438881e-07	ci right 6.783901e-06	k: 5	n:1720000
SYNPO2L   1720000 perm   1666 sec   (1032 perm/sec)   p_kst 2.906977e-06   p_cons 1.753488e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.132298e-06	k: 0	n:1730000
Cons ci ratio: 7.117502e-02	ci left: 1.687980e-03	ci right 1.813119e-03	k: 3027	n:1730000
KS ci ratio: 1.600330e+00	ci left: 9.384321e-07	ci right 6.744688e-06	k: 5	n:1730000
SYNPO2L   1730000 perm   1683 sec   (1028 perm/sec)   p_kst 2.890173e-06   p_cons 1.749711e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.120043e-06	k: 0	n:1740000
Cons ci ratio: 7.098775e-02	ci left: 1.687311e-03	ci right 1.812058e-03	k: 3043	n:1740000
KS ci ratio: 1.600330e+00	ci left: 9.330388e-07	ci right 6.705925e-06	k: 5	n:1740000
SYNPO2L   1740000 perm   1701 sec   (1023 perm/sec)   p_kst 2.873563e-06   p_cons 1.748851e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.107929e-06	k: 0	n:1750000
Cons ci ratio: 7.075564e-02	ci left: 1.688896e-03	ci right 1.813334e-03	k: 3063	n:1750000
KS ci ratio: 1.600330e+00	ci left: 9.277071e-07	ci right 6.667606e-06	k: 5	n:1750000
SYNPO2L   1750000 perm   1718 sec   (1019 perm/sec)   p_kst 2.857143e-06   p_cons 1.750286e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.095952e-06	k: 0	n:1760000
Cons ci ratio: 7.051433e-02	ci left: 1.691021e-03	ci right 1.815173e-03	k: 3084	n:1760000
KS ci ratio: 1.600330e+00	ci left: 9.224361e-07	ci right 6.629722e-06	k: 5	n:1760000
SYNPO2L   1760000 perm   1736 sec   (1014 perm/sec)   p_kst 2.840909e-06   p_cons 1.752273e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.084111e-06	k: 0	n:1770000
Cons ci ratio: 7.029816e-02	ci left: 1.692012e-03	ci right 1.815842e-03	k: 3103	n:1770000
KS ci ratio: 1.600330e+00	ci left: 9.172246e-07	ci right 6.592266e-06	k: 5	n:1770000
SYNPO2L   1770000 perm   1753 sec   (1010 perm/sec)   p_kst 2.824859e-06   p_cons 1.753107e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.072402e-06	k: 0	n:1780000
Cons ci ratio: 7.008396e-02	ci left: 1.692994e-03	ci right 1.816502e-03	k: 3122	n:1780000
KS ci ratio: 1.600330e+00	ci left: 9.120716e-07	ci right 6.555230e-06	k: 5	n:1780000
SYNPO2L   1780000 perm   1771 sec   (1005 perm/sec)   p_kst 2.808989e-06   p_cons 1.753933e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.060824e-06	k: 0	n:1790000
Cons ci ratio: 6.990515e-02	ci left: 1.692318e-03	ci right 1.815449e-03	k: 3138	n:1790000
KS ci ratio: 1.600330e+00	ci left: 9.069762e-07	ci right 6.518609e-06	k: 5	n:1790000
SYNPO2L   1790000 perm   1788 sec   (1001 perm/sec)   p_kst 2.793296e-06   p_cons 1.753073e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.049375e-06	k: 0	n:1800000
Cons ci ratio: 6.976093e-02	ci left: 1.690012e-03	ci right 1.812711e-03	k: 3151	n:1800000
KS ci ratio: 1.600330e+00	ci left: 9.019375e-07	ci right 6.482395e-06	k: 5	n:1800000
SYNPO2L   1800000 perm   1806 sec   (997 perm/sec)   p_kst 2.777778e-06   p_cons 1.750556e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.038053e-06	k: 0	n:1810000
Cons ci ratio: 6.960659e-02	ci left: 1.688275e-03	ci right 1.810566e-03	k: 3165	n:1810000
KS ci ratio: 1.600330e+00	ci left: 8.969544e-07	ci right 6.446580e-06	k: 5	n:1810000
SYNPO2L   1810000 perm   1824 sec   (992 perm/sec)   p_kst 2.762431e-06   p_cons 1.748619e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.026855e-06	k: 0	n:1820000
Cons ci ratio: 6.939863e-02	ci left: 1.689257e-03	ci right 1.811239e-03	k: 3184	n:1820000
KS ci ratio: 1.600330e+00	ci left: 8.920261e-07	ci right 6.411160e-06	k: 5	n:1820000
SYNPO2L   1820000 perm   1842 sec   (988 perm/sec)   p_kst 2.747253e-06   p_cons 1.749451e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.015779e-06	k: 0	n:1830000
Cons ci ratio: 6.919252e-02	ci left: 1.690228e-03	ci right 1.811903e-03	k: 3203	n:1830000
KS ci ratio: 1.600330e+00	ci left: 8.871516e-07	ci right 6.376126e-06	k: 5	n:1830000
SYNPO2L   1830000 perm   1861 sec   (984 perm/sec)   p_kst 2.732240e-06   p_cons 1.750273e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 2.004824e-06	k: 0	n:1840000
Cons ci ratio: 6.893470e-02	ci left: 1.693861e-03	ci right 1.815325e-03	k: 3227	n:1840000
KS ci ratio: 1.600330e+00	ci left: 8.823301e-07	ci right 6.341473e-06	k: 5	n:1840000
SYNPO2L   1840000 perm   1879 sec   (979 perm/sec)   p_kst 2.717391e-06   p_cons 1.753804e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.993987e-06	k: 0	n:1850000
Cons ci ratio: 6.877514e-02	ci left: 1.692673e-03	ci right 1.813760e-03	k: 3242	n:1850000
KS ci ratio: 1.600330e+00	ci left: 8.775608e-07	ci right 6.307195e-06	k: 5	n:1850000
SYNPO2L   1850000 perm   1897 sec   (975 perm/sec)   p_kst 2.702703e-06   p_cons 1.752432e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.983267e-06	k: 0	n:1860000
Cons ci ratio: 6.865892e-02	ci left: 1.689385e-03	ci right 1.810024e-03	k: 3253	n:1860000
KS ci ratio: 1.600330e+00	ci left: 8.728427e-07	ci right 6.273286e-06	k: 5	n:1860000
SYNPO2L   1860000 perm   1915 sec   (971 perm/sec)   p_kst 2.688172e-06   p_cons 1.748925e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.972661e-06	k: 0	n:1870000
Cons ci ratio: 6.846979e-02	ci left: 1.689812e-03	ci right 1.810136e-03	k: 3271	n:1870000
KS ci ratio: 1.600330e+00	ci left: 8.681751e-07	ci right 6.239739e-06	k: 5	n:1870000
SYNPO2L   1870000 perm   1934 sec   (967 perm/sec)   p_kst 2.673797e-06   p_cons 1.749198e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.962168e-06	k: 0	n:1880000
Cons ci ratio: 6.827183e-02	ci left: 1.690757e-03	ci right 1.810786e-03	k: 3290	n:1880000
KS ci ratio: 1.600330e+00	ci left: 8.635571e-07	ci right 6.206549e-06	k: 5	n:1880000
SYNPO2L   1880000 perm   1952 sec   (963 perm/sec)   p_kst 2.659574e-06   p_cons 1.750000e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.951786e-06	k: 0	n:1890000
Cons ci ratio: 6.802413e-02	ci left: 1.694293e-03	ci right 1.814120e-03	k: 3314	n:1890000
KS ci ratio: 1.600330e+00	ci left: 8.589880e-07	ci right 6.173710e-06	k: 5	n:1890000
SYNPO2L   1890000 perm   1971 sec   (959 perm/sec)   p_kst 2.645503e-06   p_cons 1.753439e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.941514e-06	k: 0	n:1900000
Cons ci ratio: 6.788100e-02	ci left: 1.692619e-03	ci right 1.812066e-03	k: 3328	n:1900000
KS ci ratio: 1.600330e+00	ci left: 8.544671e-07	ci right 6.141217e-06	k: 5	n:1900000
SYNPO2L   1900000 perm   1990 sec   (955 perm/sec)   p_kst 2.631579e-06   p_cons 1.751579e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.931349e-06	k: 0	n:1910000
Cons ci ratio: 1.131723e-01	ci left: 5.922162e-04	ci right 6.637622e-04	k: 1198	n:1910000
KS ci ratio: 1.600330e+00	ci left: 8.499934e-07	ci right 6.109064e-06	k: 5	n:1910000
SYNPO2L   1910000 perm   2008 sec   (951 perm/sec)   p_kst 2.617801e-06   p_cons 6.272251e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.921290e-06	k: 0	n:1920000
Cons ci ratio: 1.129371e-01	ci left: 5.916623e-04	ci right 6.629829e-04	k: 1203	n:1920000
KS ci ratio: 1.600330e+00	ci left: 8.455664e-07	ci right 6.077246e-06	k: 5	n:1920000
SYNPO2L   1920000 perm   2027 sec   (947 perm/sec)   p_kst 2.604167e-06   p_cons 6.265625e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.911335e-06	k: 0	n:1930000
Cons ci ratio: 1.126567e-01	ci left: 5.916178e-04	ci right 6.627442e-04	k: 1209	n:1930000
KS ci ratio: 1.600330e+00	ci left: 8.411852e-07	ci right 6.045757e-06	k: 5	n:1930000
SYNPO2L   1930000 perm   2046 sec   (943 perm/sec)   p_kst 2.590674e-06   p_cons 6.264249e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.901482e-06	k: 0	n:1940000
Cons ci ratio: 1.122861e-01	ci left: 5.925759e-04	ci right 6.635677e-04	k: 1217	n:1940000
KS ci ratio: 1.600330e+00	ci left: 8.368492e-07	ci right 6.014594e-06	k: 5	n:1940000
SYNPO2L   1940000 perm   2066 sec   (939 perm/sec)   p_kst 2.577320e-06   p_cons 6.273196e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.891731e-06	k: 0	n:1950000
Cons ci ratio: 1.121481e-01	ci left: 5.910323e-04	ci right 6.617464e-04	k: 1220	n:1950000
KS ci ratio: 1.600330e+00	ci left: 8.325576e-07	ci right 5.983750e-06	k: 5	n:1950000
SYNPO2L   1950000 perm   2085 sec   (935 perm/sec)   p_kst 2.564103e-06   p_cons 6.256410e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.882080e-06	k: 0	n:1960000
Cons ci ratio: 1.118736e-01	ci left: 5.909923e-04	ci right 6.615171e-04	k: 1226	n:1960000
KS ci ratio: 1.600330e+00	ci left: 8.283099e-07	ci right 5.953221e-06	k: 5	n:1960000
SYNPO2L   1960000 perm   2104 sec   (932 perm/sec)   p_kst 2.551020e-06   p_cons 6.255102e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.872526e-06	k: 0	n:1970000
Cons ci ratio: 1.113754e-01	ci left: 5.934203e-04	ci right 6.638987e-04	k: 1237	n:1970000
KS ci ratio: 1.600330e+00	ci left: 8.241053e-07	ci right 5.923001e-06	k: 5	n:1970000
SYNPO2L   1970000 perm   2124 sec   (928 perm/sec)   p_kst 2.538071e-06   p_cons 6.279188e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.863069e-06	k: 0	n:1980000
Cons ci ratio: 1.111512e-01	ci left: 5.928782e-04	ci right 6.631412e-04	k: 1242	n:1980000
KS ci ratio: 1.600330e+00	ci left: 8.199431e-07	ci right 5.893087e-06	k: 5	n:1980000
SYNPO2L   1980000 perm   2143 sec   (924 perm/sec)   p_kst 2.525253e-06   p_cons 6.272727e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.853707e-06	k: 0	n:1990000
Cons ci ratio: 1.108395e-01	ci left: 5.933188e-04	ci right 6.634240e-04	k: 1249	n:1990000
KS ci ratio: 1.600330e+00	ci left: 8.158228e-07	ci right 5.863474e-06	k: 5	n:1990000
SYNPO2L   1990000 perm   2163 sec   (920 perm/sec)   p_kst 2.512563e-06   p_cons 6.276382e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.844438e-06	k: 0	n:2000000
Cons ci ratio: 1.105744e-01	ci left: 5.932692e-04	ci right 6.631899e-04	k: 1255	n:2000000
KS ci ratio: 1.600330e+00	ci left: 8.117437e-07	ci right 5.834156e-06	k: 5	n:2000000
SYNPO2L   2000000 perm   2183 sec   (916 perm/sec)   p_kst 2.500000e-06   p_cons 6.275000e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.835262e-06	k: 0	n:2010000
Cons ci ratio: 1.102676e-01	ci left: 5.937040e-04	ci right 6.634692e-04	k: 1262	n:2010000
KS ci ratio: 1.600331e+00	ci left: 8.077051e-07	ci right 5.805131e-06	k: 5	n:2010000
SYNPO2L   2010000 perm   2202 sec   (913 perm/sec)   p_kst 2.487562e-06   p_cons 6.278607e-04   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.826176e-06	k: 0	n:2020000
Cons ci ratio: 6.572469e-02	ci left: 1.700133e-03	ci right 1.816154e-03	k: 3550	n:2020000
KS ci ratio: 1.600331e+00	ci left: 8.037066e-07	ci right 5.776392e-06	k: 5	n:2020000
SYNPO2L   2020000 perm   2222 sec   (909 perm/sec)   p_kst 2.475248e-06   p_cons 1.757426e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.817180e-06	k: 0	n:2030000
Cons ci ratio: 6.560479e-02	ci left: 1.698057e-03	ci right 1.813717e-03	k: 3563	n:2030000
KS ci ratio: 1.600331e+00	ci left: 7.997475e-07	ci right 5.747937e-06	k: 5	n:2030000
SYNPO2L   2030000 perm   2242 sec   (905 perm/sec)   p_kst 2.463054e-06   p_cons 1.755172e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.808273e-06	k: 0	n:2040000
Cons ci ratio: 6.539403e-02	ci left: 1.700823e-03	ci right 1.816285e-03	k: 3586	n:2040000
KS ci ratio: 1.600331e+00	ci left: 7.958271e-07	ci right 5.719761e-06	k: 5	n:2040000
SYNPO2L   2040000 perm   2262 sec   (902 perm/sec)   p_kst 2.450980e-06   p_cons 1.757843e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.799452e-06	k: 0	n:2050000
Cons ci ratio: 6.526685e-02	ci left: 1.699244e-03	ci right 1.814366e-03	k: 3600	n:2050000
KS ci ratio: 1.600331e+00	ci left: 7.919450e-07	ci right 5.691860e-06	k: 5	n:2050000
SYNPO2L   2050000 perm   2283 sec   (898 perm/sec)   p_kst 2.439024e-06   p_cons 1.756098e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.790717e-06	k: 0	n:2060000
Cons ci ratio: 6.512236e-02	ci left: 1.698636e-03	ci right 1.813452e-03	k: 3616	n:2060000
KS ci ratio: 1.600331e+00	ci left: 7.881006e-07	ci right 5.664230e-06	k: 5	n:2060000
SYNPO2L   2060000 perm   2303 sec   (894 perm/sec)   p_kst 2.427184e-06   p_cons 1.755340e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.782066e-06	k: 0	n:2070000
Cons ci ratio: 6.489834e-02	ci left: 1.702311e-03	ci right 1.816965e-03	k: 3641	n:2070000
KS ci ratio: 1.600331e+00	ci left: 7.842934e-07	ci right 5.636866e-06	k: 5	n:2070000
SYNPO2L   2070000 perm   2323 sec   (891 perm/sec)   p_kst 2.415459e-06   p_cons 1.758937e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.773498e-06	k: 0	n:2080000
Cons ci ratio: 6.472970e-02	ci left: 1.703113e-03	ci right 1.817512e-03	k: 3660	n:2080000
KS ci ratio: 1.600331e+00	ci left: 7.805227e-07	ci right 5.609766e-06	k: 5	n:2080000
SYNPO2L   2080000 perm   2344 sec   (887 perm/sec)   p_kst 2.403846e-06   p_cons 1.759615e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.765013e-06	k: 0	n:2090000
Cons ci ratio: 6.453601e-02	ci left: 1.705321e-03	ci right 1.819512e-03	k: 3682	n:2090000
KS ci ratio: 1.600331e+00	ci left: 7.767882e-07	ci right 5.582925e-06	k: 5	n:2090000
SYNPO2L   2090000 perm   2364 sec   (884 perm/sec)   p_kst 2.392344e-06   p_cons 1.761722e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.756608e-06	k: 0	n:2100000
Cons ci ratio: 6.435275e-02	ci left: 1.707039e-03	ci right 1.821009e-03	k: 3703	n:2100000
KS ci ratio: 1.600331e+00	ci left: 7.730892e-07	ci right 5.556340e-06	k: 5	n:2100000
SYNPO2L   2100000 perm   2385 sec   (881 perm/sec)   p_kst 2.380952e-06   p_cons 1.763333e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.748283e-06	k: 0	n:2110000
Cons ci ratio: 6.417968e-02	ci left: 1.708275e-03	ci right 1.822009e-03	k: 3723	n:2110000
KS ci ratio: 1.600331e+00	ci left: 7.694253e-07	ci right 5.530006e-06	k: 5	n:2110000
SYNPO2L   2110000 perm   2405 sec   (877 perm/sec)   p_kst 2.369668e-06   p_cons 1.764455e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.740036e-06	k: 0	n:2120000
Cons ci ratio: 6.400799e-02	ci left: 1.709500e-03	ci right 1.823000e-03	k: 3743	n:2120000
KS ci ratio: 1.600331e+00	ci left: 7.657959e-07	ci right 5.503922e-06	k: 5	n:2120000
SYNPO2L   2120000 perm   2426 sec   (874 perm/sec)   p_kst 2.358491e-06   p_cons 1.765566e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.731867e-06	k: 0	n:2130000
Cons ci ratio: 6.391427e-02	ci left: 1.706556e-03	ci right 1.819688e-03	k: 3754	n:2130000
KS ci ratio: 1.600331e+00	ci left: 7.622006e-07	ci right 5.478082e-06	k: 5	n:2130000
SYNPO2L   2130000 perm   2447 sec   (871 perm/sec)   p_kst 2.347418e-06   p_cons 1.762441e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.723774e-06	k: 0	n:2140000
Cons ci ratio: 6.377009e-02	ci left: 1.706398e-03	ci right 1.819256e-03	k: 3771	n:2140000
KS ci ratio: 1.600331e+00	ci left: 7.586389e-07	ci right 5.452483e-06	k: 5	n:2140000
SYNPO2L   2140000 perm   2468 sec   (867 perm/sec)   p_kst 2.336449e-06   p_cons 1.762150e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.715756e-06	k: 0	n:2150000
Cons ci ratio: 6.359326e-02	ci left: 1.708074e-03	ci right 1.820717e-03	k: 3792	n:2150000
KS ci ratio: 1.600331e+00	ci left: 7.551104e-07	ci right 5.427123e-06	k: 5	n:2150000
SYNPO2L   2150000 perm   2488 sec   (864 perm/sec)   p_kst 2.325581e-06   p_cons 1.763721e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.707813e-06	k: 0	n:2160000
Cons ci ratio: 6.339293e-02	ci left: 1.711101e-03	ci right 1.823575e-03	k: 3816	n:2160000
KS ci ratio: 1.600331e+00	ci left: 7.516145e-07	ci right 5.401997e-06	k: 5	n:2160000
SYNPO2L   2160000 perm   2510 sec   (861 perm/sec)   p_kst 2.314815e-06   p_cons 1.766667e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.699943e-06	k: 0	n:2170000
Cons ci ratio: 6.326877e-02	ci left: 1.710018e-03	ci right 1.822194e-03	k: 3831	n:2170000
KS ci ratio: 1.600331e+00	ci left: 7.481508e-07	ci right 5.377103e-06	k: 5	n:2170000
SYNPO2L   2170000 perm   2531 sec   (857 perm/sec)   p_kst 2.304147e-06   p_cons 1.765438e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.692145e-06	k: 0	n:2180000
Cons ci ratio: 6.307148e-02	ci left: 1.713010e-03	ci right 1.825018e-03	k: 3855	n:2180000
KS ci ratio: 1.600331e+00	ci left: 7.447189e-07	ci right 5.352438e-06	k: 5	n:2180000
SYNPO2L   2180000 perm   2552 sec   (854 perm/sec)   p_kst 2.293578e-06   p_cons 1.768349e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.684418e-06	k: 0	n:2190000
Cons ci ratio: 6.287602e-02	ci left: 1.715974e-03	ci right 1.827816e-03	k: 3879	n:2190000
KS ci ratio: 1.600331e+00	ci left: 7.413184e-07	ci right 5.327997e-06	k: 5	n:2190000
SYNPO2L   2190000 perm   2573 sec   (851 perm/sec)   p_kst 2.283105e-06   p_cons 1.771233e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.676762e-06	k: 0	n:2200000
Cons ci ratio: 6.277910e-02	ci left: 1.713543e-03	ci right 1.825048e-03	k: 3891	n:2200000
KS ci ratio: 1.600331e+00	ci left: 7.379488e-07	ci right 5.303779e-06	k: 5	n:2200000
SYNPO2L   2200000 perm   2595 sec   (848 perm/sec)   p_kst 2.272727e-06   p_cons 1.768636e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.669175e-06	k: 0	n:2210000
Cons ci ratio: 6.263442e-02	ci left: 1.713807e-03	ci right 1.825062e-03	k: 3909	n:2210000
KS ci ratio: 1.600331e+00	ci left: 7.346096e-07	ci right 5.279780e-06	k: 5	n:2210000
SYNPO2L   2210000 perm   2616 sec   (845 perm/sec)   p_kst 2.262443e-06   p_cons 1.768778e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.661656e-06	k: 0	n:2220000
Cons ci ratio: 6.242709e-02	ci left: 1.717615e-03	ci right 1.828736e-03	k: 3935	n:2220000
KS ci ratio: 1.600331e+00	ci left: 7.313006e-07	ci right 5.255998e-06	k: 5	n:2220000
SYNPO2L   2220000 perm   2637 sec   (842 perm/sec)   p_kst 2.252252e-06   p_cons 1.772523e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.654205e-06	k: 0	n:2230000
Cons ci ratio: 6.230061e-02	ci left: 1.716976e-03	ci right 1.827822e-03	k: 3951	n:2230000
KS ci ratio: 1.600331e+00	ci left: 7.280212e-07	ci right 5.232428e-06	k: 5	n:2230000
SYNPO2L   2230000 perm   2659 sec   (839 perm/sec)   p_kst 2.242152e-06   p_cons 1.771749e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.646820e-06	k: 0	n:2240000
Cons ci ratio: 6.220632e-02	ci left: 1.714585e-03	ci right 1.825103e-03	k: 3963	n:2240000
KS ci ratio: 1.481618e+00	ci left: 9.829891e-07	ci right 5.830113e-06	k: 6	n:2240000
SYNPO2L   2240000 perm   2680 sec   (836 perm/sec)   p_kst 2.678571e-06   p_cons 1.769196e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.639501e-06	k: 0	n:2250000
Cons ci ratio: 6.205776e-02	ci left: 1.715278e-03	ci right 1.825567e-03	k: 3982	n:2250000
KS ci ratio: 1.481618e+00	ci left: 9.786203e-07	ci right 5.804202e-06	k: 6	n:2250000
SYNPO2L   2250000 perm   2702 sec   (833 perm/sec)   p_kst 2.666667e-06   p_cons 1.769778e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.632246e-06	k: 0	n:2260000
Cons ci ratio: 6.191800e-02	ci left: 1.715529e-03	ci right 1.825577e-03	k: 4000	n:2260000
KS ci ratio: 1.481618e+00	ci left: 9.742901e-07	ci right 5.778519e-06	k: 6	n:2260000
SYNPO2L   2260000 perm   2724 sec   (830 perm/sec)   p_kst 2.654867e-06   p_cons 1.769912e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.625056e-06	k: 0	n:2270000
Cons ci ratio: 6.175610e-02	ci left: 1.717080e-03	ci right 1.826929e-03	k: 4021	n:2270000
KS ci ratio: 1.481618e+00	ci left: 9.699981e-07	ci right 5.753063e-06	k: 6	n:2270000
SYNPO2L   2270000 perm   2747 sec   (826 perm/sec)   p_kst 2.643172e-06   p_cons 1.771366e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.617928e-06	k: 0	n:2280000
Cons ci ratio: 6.164895e-02	ci left: 1.715594e-03	ci right 1.825151e-03	k: 4035	n:2280000
KS ci ratio: 1.481618e+00	ci left: 9.657437e-07	ci right 5.727831e-06	k: 6	n:2280000
SYNPO2L   2280000 perm   2769 sec   (823 perm/sec)   p_kst 2.631579e-06   p_cons 1.769737e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.610863e-06	k: 0	n:2290000
Cons ci ratio: 6.148155e-02	ci left: 1.717562e-03	ci right 1.826936e-03	k: 4057	n:2290000
KS ci ratio: 1.481618e+00	ci left: 9.615265e-07	ci right 5.702818e-06	k: 6	n:2290000
SYNPO2L   2290000 perm   2791 sec   (820 perm/sec)   p_kst 2.620087e-06   p_cons 1.771616e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.603859e-06	k: 0	n:2300000
Cons ci ratio: 6.133811e-02	ci left: 1.718228e-03	ci right 1.827380e-03	k: 4076	n:2300000
KS ci ratio: 1.481618e+00	ci left: 9.573459e-07	ci right 5.678023e-06	k: 6	n:2300000
SYNPO2L   2300000 perm   2814 sec   (817 perm/sec)   p_kst 2.608696e-06   p_cons 1.772174e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.596916e-06	k: 0	n:2310000
Cons ci ratio: 6.126312e-02	ci left: 1.715052e-03	ci right 1.823865e-03	k: 4086	n:2310000
KS ci ratio: 1.481618e+00	ci left: 9.532016e-07	ci right 5.653443e-06	k: 6	n:2310000
SYNPO2L   2310000 perm   2836 sec   (815 perm/sec)   p_kst 2.597403e-06   p_cons 1.768831e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.590033e-06	k: 0	n:2320000
Cons ci ratio: 6.115104e-02	ci left: 1.714027e-03	ci right 1.822568e-03	k: 4101	n:2320000
KS ci ratio: 1.481618e+00	ci left: 9.490929e-07	ci right 5.629075e-06	k: 6	n:2320000
SYNPO2L   2320000 perm   2858 sec   (812 perm/sec)   p_kst 2.586207e-06   p_cons 1.767672e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.583209e-06	k: 0	n:2330000
Cons ci ratio: 6.103958e-02	ci left: 1.713010e-03	ci right 1.821282e-03	k: 4116	n:2330000
KS ci ratio: 1.481618e+00	ci left: 9.450196e-07	ci right 5.604916e-06	k: 6	n:2330000
SYNPO2L   2330000 perm   2881 sec   (809 perm/sec)   p_kst 2.575107e-06   p_cons 1.766524e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.576443e-06	k: 0	n:2340000
Cons ci ratio: 6.090657e-02	ci left: 1.713264e-03	ci right 1.821308e-03	k: 4134	n:2340000
KS ci ratio: 1.481618e+00	ci left: 9.409810e-07	ci right 5.580963e-06	k: 6	n:2340000
SYNPO2L   2340000 perm   2903 sec   (806 perm/sec)   p_kst 2.564103e-06   p_cons 1.766667e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.569735e-06	k: 0	n:2350000
Cons ci ratio: 6.079644e-02	ci left: 1.712259e-03	ci right 1.820038e-03	k: 4149	n:2350000
KS ci ratio: 1.481618e+00	ci left: 9.369768e-07	ci right 5.557215e-06	k: 6	n:2350000
SYNPO2L   2350000 perm   2926 sec   (803 perm/sec)   p_kst 2.553191e-06   p_cons 1.765532e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.563083e-06	k: 0	n:2360000
Cons ci ratio: 6.064315e-02	ci left: 1.713767e-03	ci right 1.821359e-03	k: 4170	n:2360000
KS ci ratio: 1.481618e+00	ci left: 9.330066e-07	ci right 5.533667e-06	k: 6	n:2360000
SYNPO2L   2360000 perm   2948 sec   (800 perm/sec)   p_kst 2.542373e-06   p_cons 1.766949e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.556488e-06	k: 0	n:2370000
Cons ci ratio: 6.051995e-02	ci left: 1.713601e-03	ci right 1.820956e-03	k: 4187	n:2370000
KS ci ratio: 1.481618e+00	ci left: 9.290699e-07	ci right 5.510318e-06	k: 6	n:2370000
SYNPO2L   2370000 perm   2971 sec   (798 perm/sec)   p_kst 2.531646e-06   p_cons 1.766667e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.549948e-06	k: 0	n:2380000
Cons ci ratio: 6.034720e-02	ci left: 1.716332e-03	ci right 1.823541e-03	k: 4211	n:2380000
KS ci ratio: 1.481618e+00	ci left: 9.251662e-07	ci right 5.487166e-06	k: 6	n:2380000
SYNPO2L   2380000 perm   2994 sec   (795 perm/sec)   p_kst 2.521008e-06   p_cons 1.769328e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.543463e-06	k: 0	n:2390000
Cons ci ratio: 6.019016e-02	ci left: 1.718217e-03	ci right 1.825255e-03	k: 4233	n:2390000
KS ci ratio: 1.481618e+00	ci left: 9.212952e-07	ci right 5.464207e-06	k: 6	n:2390000
SYNPO2L   2390000 perm   3017 sec   (792 perm/sec)   p_kst 2.510460e-06   p_cons 1.771130e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.537032e-06	k: 0	n:2400000
Cons ci ratio: 6.008386e-02	ci left: 1.717214e-03	ci right 1.823994e-03	k: 4248	n:2400000
KS ci ratio: 1.481618e+00	ci left: 9.174565e-07	ci right 5.441440e-06	k: 6	n:2400000
SYNPO2L   2400000 perm   3040 sec   (790 perm/sec)   p_kst 2.500000e-06   p_cons 1.770000e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.530654e-06	k: 0	n:2410000
Cons ci ratio: 5.993589e-02	ci left: 1.718672e-03	ci right 1.825270e-03	k: 4269	n:2410000
KS ci ratio: 1.481618e+00	ci left: 9.136496e-07	ci right 5.418861e-06	k: 6	n:2410000
SYNPO2L   2410000 perm   3063 sec   (787 perm/sec)   p_kst 2.489627e-06   p_cons 1.771369e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.524329e-06	k: 0	n:2420000
Cons ci ratio: 5.978203e-02	ci left: 1.720525e-03	ci right 1.826954e-03	k: 4291	n:2420000
KS ci ratio: 1.481618e+00	ci left: 9.098742e-07	ci right 5.396469e-06	k: 6	n:2420000
SYNPO2L   2420000 perm   3086 sec   (784 perm/sec)   p_kst 2.479339e-06   p_cons 1.773140e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.518056e-06	k: 0	n:2430000
Cons ci ratio: 5.962935e-02	ci left: 1.722363e-03	ci right 1.828624e-03	k: 4313	n:2430000
KS ci ratio: 1.481618e+00	ci left: 9.061298e-07	ci right 5.374261e-06	k: 6	n:2430000
SYNPO2L   2430000 perm   3109 sec   (782 perm/sec)   p_kst 2.469136e-06   p_cons 1.774897e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.511835e-06	k: 0	n:2440000
Cons ci ratio: 5.952598e-02	ci left: 1.721360e-03	ci right 1.827369e-03	k: 4328	n:2440000
KS ci ratio: 1.481618e+00	ci left: 9.024162e-07	ci right 5.352236e-06	k: 6	n:2440000
SYNPO2L   2440000 perm   3133 sec   (779 perm/sec)   p_kst 2.459016e-06   p_cons 1.773770e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.505664e-06	k: 0	n:2450000
Cons ci ratio: 5.940946e-02	ci left: 1.721169e-03	ci right 1.826953e-03	k: 4345	n:2450000
KS ci ratio: 1.481618e+00	ci left: 8.987329e-07	ci right 5.330390e-06	k: 6	n:2450000
SYNPO2L   2450000 perm   3157 sec   (776 perm/sec)   p_kst 2.448980e-06   p_cons 1.773469e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.499543e-06	k: 0	n:2460000
Cons ci ratio: 5.928681e-02	ci left: 1.721381e-03	ci right 1.826952e-03	k: 4363	n:2460000
KS ci ratio: 1.481618e+00	ci left: 8.950795e-07	ci right 5.308722e-06	k: 6	n:2460000
SYNPO2L   2460000 perm   3180 sec   (774 perm/sec)   p_kst 2.439024e-06   p_cons 1.773577e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.493472e-06	k: 0	n:2470000
Cons ci ratio: 5.919875e-02	ci left: 1.719597e-03	ci right 1.824896e-03	k: 4376	n:2470000
KS ci ratio: 1.481618e+00	ci left: 8.914557e-07	ci right 5.287229e-06	k: 6	n:2470000
SYNPO2L   2470000 perm   3204 sec   (771 perm/sec)   p_kst 2.429150e-06   p_cons 1.771660e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.487450e-06	k: 0	n:2480000
Cons ci ratio: 5.911784e-02	ci left: 1.717431e-03	ci right 1.822448e-03	k: 4388	n:2480000
KS ci ratio: 1.481618e+00	ci left: 8.878611e-07	ci right 5.265909e-06	k: 6	n:2480000
SYNPO2L   2480000 perm   3228 sec   (768 perm/sec)   p_kst 2.419355e-06   p_cons 1.769355e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.481477e-06	k: 0	n:2490000
Cons ci ratio: 5.905070e-02	ci left: 1.714490e-03	ci right 1.819204e-03	k: 4398	n:2490000
KS ci ratio: 1.481618e+00	ci left: 8.842954e-07	ci right 5.244761e-06	k: 6	n:2490000
SYNPO2L   2490000 perm   3253 sec   (765 perm/sec)   p_kst 2.409639e-06   p_cons 1.766265e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.475551e-06	k: 0	n:2500000
Cons ci ratio: 5.891689e-02	ci left: 1.715514e-03	ci right 1.820046e-03	k: 4418	n:2500000
KS ci ratio: 1.481618e+00	ci left: 8.807582e-07	ci right 5.223782e-06	k: 6	n:2500000
SYNPO2L   2500000 perm   3277 sec   (763 perm/sec)   p_kst 2.400000e-06   p_cons 1.767200e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.469672e-06	k: 0	n:2510000
Cons ci ratio: 5.879062e-02	ci left: 1.716138e-03	ci right 1.820475e-03	k: 4437	n:2510000
KS ci ratio: 1.481618e+00	ci left: 8.772492e-07	ci right 5.202970e-06	k: 6	n:2510000
SYNPO2L   2510000 perm   3301 sec   (760 perm/sec)   p_kst 2.390438e-06   p_cons 1.767729e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.463840e-06	k: 0	n:2520000
Cons ci ratio: 5.869155e-02	ci left: 1.715192e-03	ci right 1.819291e-03	k: 4452	n:2520000
KS ci ratio: 1.481618e+00	ci left: 8.737680e-07	ci right 5.182324e-06	k: 6	n:2520000
SYNPO2L   2520000 perm   3326 sec   (758 perm/sec)   p_kst 2.380952e-06   p_cons 1.766667e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.458054e-06	k: 0	n:2530000
Cons ci ratio: 5.857328e-02	ci left: 1.715423e-03	ci right 1.819319e-03	k: 4470	n:2530000
KS ci ratio: 1.481618e+00	ci left: 8.703144e-07	ci right 5.161840e-06	k: 6	n:2530000
SYNPO2L   2530000 perm   3350 sec   (755 perm/sec)   p_kst 2.371542e-06   p_cons 1.766798e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.452314e-06	k: 0	n:2540000
Cons ci ratio: 5.839061e-02	ci left: 1.719532e-03	ci right 1.823341e-03	k: 4498	n:2540000
KS ci ratio: 1.481618e+00	ci left: 8.668880e-07	ci right 5.141518e-06	k: 6	n:2540000
SYNPO2L   2540000 perm   3375 sec   (753 perm/sec)   p_kst 2.362205e-06   p_cons 1.770866e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.446618e-06	k: 0	n:2550000
Cons ci ratio: 5.826769e-02	ci left: 1.720131e-03	ci right 1.823750e-03	k: 4517	n:2550000
KS ci ratio: 1.481618e+00	ci left: 8.634884e-07	ci right 5.121355e-06	k: 6	n:2550000
SYNPO2L   2550000 perm   3400 sec   (750 perm/sec)   p_kst 2.352941e-06   p_cons 1.771373e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.440968e-06	k: 0	n:2560000
Cons ci ratio: 5.815838e-02	ci left: 1.719956e-03	ci right 1.823364e-03	k: 4534	n:2560000
KS ci ratio: 1.481618e+00	ci left: 8.601154e-07	ci right 5.101350e-06	k: 6	n:2560000
SYNPO2L   2560000 perm   3425 sec   (747 perm/sec)   p_kst 2.343750e-06   p_cons 1.771094e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.435361e-06	k: 0	n:2570000
Cons ci ratio: 5.806247e-02	ci left: 1.719015e-03	ci right 1.822190e-03	k: 4549	n:2570000
KS ci ratio: 1.481618e+00	ci left: 8.567687e-07	ci right 5.081500e-06	k: 6	n:2570000
SYNPO2L   2570000 perm   3450 sec   (745 perm/sec)   p_kst 2.334630e-06   p_cons 1.770039e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.429797e-06	k: 0	n:2580000
Cons ci ratio: 5.793525e-02	ci left: 1.719992e-03	ci right 1.822992e-03	k: 4569	n:2580000
KS ci ratio: 1.481618e+00	ci left: 8.534478e-07	ci right 5.061805e-06	k: 6	n:2580000
SYNPO2L   2580000 perm   3475 sec   (743 perm/sec)   p_kst 2.325581e-06   p_cons 1.770930e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.424277e-06	k: 0	n:2590000
Cons ci ratio: 5.782149e-02	ci left: 1.720200e-03	ci right 1.823004e-03	k: 4587	n:2590000
KS ci ratio: 1.481618e+00	ci left: 8.501527e-07	ci right 5.042261e-06	k: 6	n:2590000
SYNPO2L   2590000 perm   3500 sec   (740 perm/sec)   p_kst 2.316602e-06   p_cons 1.771042e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.418799e-06	k: 0	n:2600000
Cons ci ratio: 5.772723e-02	ci left: 1.719270e-03	ci right 1.821845e-03	k: 4602	n:2600000
KS ci ratio: 1.481618e+00	ci left: 8.468829e-07	ci right 5.022868e-06	k: 6	n:2600000
SYNPO2L   2600000 perm   3525 sec   (738 perm/sec)   p_kst 2.307692e-06   p_cons 1.770000e-03   p_joint 0

Joint ci ratio: 3.919998e+00	ci left: 0	ci right 1.413363e-06	k: 0	n:2610000
Cons ci ratio: 5.763343e-02	ci left: 1.718347e-03	ci right 1.820694e-03	k: 4617	n:2610000
KS ci ratio: 1.481618e+00	ci left: 8.436381e-07	ci right 5.003623e-06	k: 6	n:2610000
SYNPO2L   2610000 perm   3550 sec   (735 perm/sec)   p_kst 2.298851e-06   p_cons 1.768966e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.407968e-06	k: 0	n:2620000
Cons ci ratio: 5.754009e-02	ci left: 1.717431e-03	ci right 1.819553e-03	k: 4632	n:2620000
KS ci ratio: 1.481618e+00	ci left: 8.404181e-07	ci right 4.984525e-06	k: 6	n:2620000
SYNPO2L   2620000 perm   3575 sec   (733 perm/sec)   p_kst 2.290076e-06   p_cons 1.767939e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.402615e-06	k: 0	n:2630000
Cons ci ratio: 5.739156e-02	ci left: 1.719895e-03	ci right 1.821891e-03	k: 4656	n:2630000
KS ci ratio: 1.481618e+00	ci left: 8.372226e-07	ci right 4.965573e-06	k: 6	n:2630000
SYNPO2L   2630000 perm   3600 sec   (731 perm/sec)   p_kst 2.281369e-06   p_cons 1.770342e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.397302e-06	k: 0	n:2640000
Cons ci ratio: 5.723805e-02	ci left: 1.722715e-03	ci right 1.824595e-03	k: 4681	n:2640000
KS ci ratio: 1.481618e+00	ci left: 8.340513e-07	ci right 4.946764e-06	k: 6	n:2640000
SYNPO2L   2640000 perm   3625 sec   (728 perm/sec)   p_kst 2.272727e-06   p_cons 1.773106e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.392029e-06	k: 0	n:2650000
Cons ci ratio: 5.711616e-02	ci left: 1.723653e-03	ci right 1.825365e-03	k: 4701	n:2650000
KS ci ratio: 1.385927e+00	ci left: 1.062024e-06	ci right 5.442511e-06	k: 7	n:2650000
SYNPO2L   2650000 perm   3650 sec   (726 perm/sec)   p_kst 2.641509e-06   p_cons 1.773962e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.386796e-06	k: 0	n:2660000
Cons ci ratio: 5.700110e-02	ci left: 1.724214e-03	ci right 1.825747e-03	k: 4720	n:2660000
KS ci ratio: 1.385927e+00	ci left: 1.058032e-06	ci right 5.422051e-06	k: 7	n:2660000
SYNPO2L   2660000 perm   3675 sec   (724 perm/sec)   p_kst 2.631579e-06   p_cons 1.774436e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.381602e-06	k: 0	n:2670000
Cons ci ratio: 5.687471e-02	ci left: 1.725510e-03	ci right 1.826886e-03	k: 4741	n:2670000
KS ci ratio: 1.385927e+00	ci left: 1.054069e-06	ci right 5.401744e-06	k: 7	n:2670000
SYNPO2L   2670000 perm   3701 sec   (721 perm/sec)   p_kst 2.621723e-06   p_cons 1.775655e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.376447e-06	k: 0	n:2680000
Cons ci ratio: 5.674916e-02	ci left: 1.726796e-03	ci right 1.828017e-03	k: 4762	n:2680000
KS ci ratio: 1.385927e+00	ci left: 1.050136e-06	ci right 5.381588e-06	k: 7	n:2680000
SYNPO2L   2680000 perm   3726 sec   (719 perm/sec)   p_kst 2.611940e-06   p_cons 1.776866e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.371330e-06	k: 0	n:2690000
Cons ci ratio: 5.658298e-02	ci left: 1.730638e-03	ci right 1.831778e-03	k: 4790	n:2690000
KS ci ratio: 1.385927e+00	ci left: 1.046232e-06	ci right 5.361582e-06	k: 7	n:2690000
SYNPO2L   2690000 perm   3752 sec   (717 perm/sec)   p_kst 2.602230e-06   p_cons 1.780669e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.366251e-06	k: 0	n:2700000
Cons ci ratio: 5.648287e-02	ci left: 1.730436e-03	ci right 1.831378e-03	k: 4807	n:2700000
KS ci ratio: 1.385927e+00	ci left: 1.042357e-06	ci right 5.341724e-06	k: 7	n:2700000
SYNPO2L   2700000 perm   3777 sec   (715 perm/sec)   p_kst 2.592593e-06   p_cons 1.780370e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.361209e-06	k: 0	n:2710000
Cons ci ratio: 5.638914e-02	ci left: 1.729871e-03	ci right 1.830608e-03	k: 4823	n:2710000
KS ci ratio: 1.385927e+00	ci left: 1.038511e-06	ci right 5.322013e-06	k: 7	n:2710000
SYNPO2L   2710000 perm   3803 sec   (713 perm/sec)   p_kst 2.583026e-06   p_cons 1.779705e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.356205e-06	k: 0	n:2720000
Cons ci ratio: 5.633670e-02	ci left: 1.726773e-03	ci right 1.827233e-03	k: 4832	n:2720000
KS ci ratio: 1.385927e+00	ci left: 1.034693e-06	ci right 5.302447e-06	k: 7	n:2720000
SYNPO2L   2720000 perm   3829 sec   (710 perm/sec)   p_kst 2.573529e-06   p_cons 1.776471e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.351237e-06	k: 0	n:2730000
Cons ci ratio: 5.622628e-02	ci left: 1.727310e-03	ci right 1.827598e-03	k: 4851	n:2730000
KS ci ratio: 1.385927e+00	ci left: 1.030903e-06	ci right 5.283024e-06	k: 7	n:2730000
SYNPO2L   2730000 perm   3854 sec   (708 perm/sec)   p_kst 2.564103e-06   p_cons 1.776923e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.346305e-06	k: 0	n:2740000
Cons ci ratio: 5.610496e-02	ci left: 1.728563e-03	ci right 1.828700e-03	k: 4872	n:2740000
KS ci ratio: 1.385927e+00	ci left: 1.027140e-06	ci right 5.263743e-06	k: 7	n:2740000
SYNPO2L   2740000 perm   3880 sec   (706 perm/sec)   p_kst 2.554745e-06   p_cons 1.778102e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.341410e-06	k: 0	n:2750000
Cons ci ratio: 5.599589e-02	ci left: 1.729089e-03	ci right 1.829056e-03	k: 4891	n:2750000
KS ci ratio: 1.385927e+00	ci left: 1.023405e-06	ci right 5.244602e-06	k: 7	n:2750000
SYNPO2L   2750000 perm   3906 sec   (704 perm/sec)   p_kst 2.545455e-06   p_cons 1.778545e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.336550e-06	k: 0	n:2760000
Cons ci ratio: 5.585897e-02	ci left: 1.731398e-03	ci right 1.831246e-03	k: 4915	n:2760000
KS ci ratio: 1.385927e+00	ci left: 1.019697e-06	ci right 5.225600e-06	k: 7	n:2760000
SYNPO2L   2760000 perm   3932 sec   (702 perm/sec)   p_kst 2.536232e-06   p_cons 1.780797e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.331725e-06	k: 0	n:2770000
Cons ci ratio: 5.576831e-02	ci left: 1.730843e-03	ci right 1.830492e-03	k: 4931	n:2770000
KS ci ratio: 1.385927e+00	ci left: 1.016016e-06	ci right 5.206735e-06	k: 7	n:2770000
SYNPO2L   2770000 perm   3959 sec   (700 perm/sec)   p_kst 2.527076e-06   p_cons 1.780144e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.326934e-06	k: 0	n:2780000
Cons ci ratio: 5.561057e-02	ci left: 1.734549e-03	ci right 1.834119e-03	k: 4959	n:2780000
KS ci ratio: 1.385927e+00	ci left: 1.012361e-06	ci right 5.188006e-06	k: 7	n:2780000
SYNPO2L   2780000 perm   3985 sec   (698 perm/sec)   p_kst 2.517986e-06   p_cons 1.783813e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.322178e-06	k: 0	n:2790000
Cons ci ratio: 5.550994e-02	ci left: 1.734694e-03	ci right 1.834086e-03	k: 4977	n:2790000
KS ci ratio: 1.385927e+00	ci left: 1.008733e-06	ci right 5.169411e-06	k: 7	n:2790000
SYNPO2L   2790000 perm   4011 sec   (696 perm/sec)   p_kst 2.508961e-06   p_cons 1.783871e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.317456e-06	k: 0	n:2800000
Cons ci ratio: 5.541541e-02	ci left: 1.734486e-03	ci right 1.833692e-03	k: 4994	n:2800000
KS ci ratio: 1.385927e+00	ci left: 1.005130e-06	ci right 5.150949e-06	k: 7	n:2800000
SYNPO2L   2800000 perm   4039 sec   (693 perm/sec)   p_kst 2.500000e-06   p_cons 1.783571e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.312768e-06	k: 0	n:2810000
Cons ci ratio: 5.529925e-02	ci left: 1.735683e-03	ci right 1.834743e-03	k: 5015	n:2810000
KS ci ratio: 1.385927e+00	ci left: 1.001553e-06	ci right 5.132618e-06	k: 7	n:2810000
SYNPO2L   2810000 perm   4065 sec   (691 perm/sec)   p_kst 2.491103e-06   p_cons 1.784698e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.308112e-06	k: 0	n:2820000
Cons ci ratio: 5.519480e-02	ci left: 1.736173e-03	ci right 1.835067e-03	k: 5034	n:2820000
KS ci ratio: 1.385927e+00	ci left: 9.980016e-07	ci right 5.114417e-06	k: 7	n:2820000
SYNPO2L   2820000 perm   4092 sec   (689 perm/sec)   p_kst 2.482270e-06   p_cons 1.785106e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.303490e-06	k: 0	n:2830000
Cons ci ratio: 5.510187e-02	ci left: 1.735962e-03	ci right 1.834673e-03	k: 5051	n:2830000
KS ci ratio: 1.385927e+00	ci left: 9.944751e-07	ci right 5.096345e-06	k: 7	n:2830000
SYNPO2L   2830000 perm   4120 sec   (687 perm/sec)   p_kst 2.473498e-06   p_cons 1.784806e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.298900e-06	k: 0	n:2840000
Cons ci ratio: 5.502028e-02	ci left: 1.735059e-03	ci right 1.833567e-03	k: 5066	n:2840000
KS ci ratio: 1.385927e+00	ci left: 9.909735e-07	ci right 5.078400e-06	k: 7	n:2840000
SYNPO2L   2840000 perm   4147 sec   (685 perm/sec)   p_kst 2.464789e-06   p_cons 1.783803e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.294343e-06	k: 0	n:2850000
Cons ci ratio: 5.490658e-02	ci left: 1.736238e-03	ci right 1.834603e-03	k: 5087	n:2850000
KS ci ratio: 1.385927e+00	ci left: 9.874964e-07	ci right 5.060581e-06	k: 7	n:2850000
SYNPO2L   2850000 perm   4174 sec   (683 perm/sec)   p_kst 2.456140e-06   p_cons 1.784912e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.289817e-06	k: 0	n:2860000
Cons ci ratio: 5.484201e-02	ci left: 1.734305e-03	ci right 1.832442e-03	k: 5099	n:2860000
KS ci ratio: 1.385927e+00	ci left: 9.840436e-07	ci right 5.042887e-06	k: 7	n:2860000
SYNPO2L   2860000 perm   4201 sec   (681 perm/sec)   p_kst 2.447552e-06   p_cons 1.782867e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.285323e-06	k: 0	n:2870000
Cons ci ratio: 5.475620e-02	ci left: 1.733761e-03	ci right 1.831708e-03	k: 5115	n:2870000
KS ci ratio: 1.385927e+00	ci left: 9.806148e-07	ci right 5.025316e-06	k: 7	n:2870000
SYNPO2L   2870000 perm   4228 sec   (679 perm/sec)   p_kst 2.439024e-06   p_cons 1.782230e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.280860e-06	k: 0	n:2880000
Cons ci ratio: 5.462283e-02	ci left: 1.736303e-03	ci right 1.834148e-03	k: 5140	n:2880000
KS ci ratio: 1.385927e+00	ci left: 9.772099e-07	ci right 5.007867e-06	k: 7	n:2880000
SYNPO2L   2880000 perm   4255 sec   (677 perm/sec)   p_kst 2.430556e-06   p_cons 1.784722e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.276428e-06	k: 0	n:2890000
Cons ci ratio: 5.455925e-02	ci left: 1.734391e-03	ci right 1.832010e-03	k: 5152	n:2890000
KS ci ratio: 1.385927e+00	ci left: 9.738286e-07	ci right 4.990539e-06	k: 7	n:2890000
SYNPO2L   2890000 perm   4283 sec   (675 perm/sec)   p_kst 2.422145e-06   p_cons 1.782699e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.272027e-06	k: 0	n:2900000
Cons ci ratio: 5.447476e-02	ci left: 1.733852e-03	ci right 1.831285e-03	k: 5168	n:2900000
KS ci ratio: 1.385927e+00	ci left: 9.704706e-07	ci right 4.973330e-06	k: 7	n:2900000
SYNPO2L   2900000 perm   4310 sec   (673 perm/sec)   p_kst 2.413793e-06   p_cons 1.782069e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.267655e-06	k: 0	n:2910000
Cons ci ratio: 5.435392e-02	ci left: 1.735690e-03	ci right 1.833003e-03	k: 5191	n:2910000
KS ci ratio: 1.385927e+00	ci left: 9.671356e-07	ci right 4.956240e-06	k: 7	n:2910000
SYNPO2L   2910000 perm   4338 sec   (671 perm/sec)   p_kst 2.405498e-06   p_cons 1.783849e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.263314e-06	k: 0	n:2920000
Cons ci ratio: 5.425473e-02	ci left: 1.736164e-03	ci right 1.833321e-03	k: 5210	n:2920000
KS ci ratio: 1.385927e+00	ci left: 9.638235e-07	ci right 4.939266e-06	k: 7	n:2920000
SYNPO2L   2920000 perm   4365 sec   (669 perm/sec)   p_kst 2.397260e-06   p_cons 1.784247e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.259002e-06	k: 0	n:2930000
Cons ci ratio: 5.407844e-02	ci left: 1.741686e-03	ci right 1.838825e-03	k: 5244	n:2930000
KS ci ratio: 1.385927e+00	ci left: 9.605340e-07	ci right 4.922409e-06	k: 7	n:2930000
SYNPO2L   2930000 perm   4392 sec   (667 perm/sec)   p_kst 2.389078e-06   p_cons 1.789761e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.254720e-06	k: 0	n:2940000
Cons ci ratio: 5.400131e-02	ci left: 1.740795e-03	ci right 1.837742e-03	k: 5259	n:2940000
KS ci ratio: 1.385927e+00	ci left: 9.572669e-07	ci right 4.905666e-06	k: 7	n:2940000
SYNPO2L   2940000 perm   4420 sec   (665 perm/sec)   p_kst 2.380952e-06   p_cons 1.788776e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.250467e-06	k: 0	n:2950000
Cons ci ratio: 5.389892e-02	ci left: 1.741582e-03	ci right 1.838383e-03	k: 5279	n:2950000
KS ci ratio: 1.385927e+00	ci left: 9.540219e-07	ci right 4.889036e-06	k: 7	n:2950000
SYNPO2L   2950000 perm   4448 sec   (663 perm/sec)   p_kst 2.372881e-06   p_cons 1.789492e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.246242e-06	k: 0	n:2960000
Cons ci ratio: 5.376662e-02	ci left: 1.744364e-03	ci right 1.841074e-03	k: 5305	n:2960000
KS ci ratio: 1.385927e+00	ci left: 9.507988e-07	ci right 4.872519e-06	k: 7	n:2960000
SYNPO2L   2960000 perm   4476 sec   (661 perm/sec)   p_kst 2.364865e-06   p_cons 1.792230e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.242046e-06	k: 0	n:2970000
Cons ci ratio: 5.366556e-02	ci left: 1.745134e-03	ci right 1.841700e-03	k: 5325	n:2970000
KS ci ratio: 1.385927e+00	ci left: 9.475975e-07	ci right 4.856114e-06	k: 7	n:2970000
SYNPO2L   2970000 perm   4504 sec   (659 perm/sec)   p_kst 2.356902e-06   p_cons 1.792929e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.237878e-06	k: 0	n:2980000
Cons ci ratio: 5.358515e-02	ci left: 1.744575e-03	ci right 1.840961e-03	k: 5341	n:2980000
KS ci ratio: 1.385927e+00	ci left: 9.444176e-07	ci right 4.839818e-06	k: 7	n:2980000
SYNPO2L   2980000 perm   4533 sec   (657 perm/sec)   p_kst 2.348993e-06   p_cons 1.792282e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.233738e-06	k: 0	n:2990000
Cons ci ratio: 5.346014e-02	ci left: 1.746990e-03	ci right 1.843277e-03	k: 5366	n:2990000
KS ci ratio: 1.385927e+00	ci left: 9.412590e-07	ci right 4.823631e-06	k: 7	n:2990000
SYNPO2L   2990000 perm   4561 sec   (656 perm/sec)   p_kst 2.341137e-06   p_cons 1.794649e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.229626e-06	k: 0	n:3000000
Cons ci ratio: 5.337071e-02	ci left: 1.747087e-03	ci right 1.843213e-03	k: 5384	n:3000000
KS ci ratio: 1.385927e+00	ci left: 9.381215e-07	ci right 4.807553e-06	k: 7	n:3000000
SYNPO2L   3000000 perm   4589 sec   (654 perm/sec)   p_kst 2.333333e-06   p_cons 1.794667e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.225541e-06	k: 0	n:3010000
Cons ci ratio: 5.324719e-02	ci left: 1.749477e-03	ci right 1.845505e-03	k: 5409	n:3010000
KS ci ratio: 1.385927e+00	ci left: 9.350048e-07	ci right 4.791581e-06	k: 7	n:3010000
SYNPO2L   3010000 perm   4618 sec   (652 perm/sec)   p_kst 2.325581e-06   p_cons 1.797010e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.221483e-06	k: 0	n:3020000
Cons ci ratio: 5.314412e-02	ci left: 1.750545e-03	ci right 1.846440e-03	k: 5430	n:3020000
KS ci ratio: 1.306665e+00	ci left: 1.143654e-06	ci right 5.219592e-06	k: 8	n:3020000
SYNPO2L   3020000 perm   4646 sec   (650 perm/sec)   p_kst 2.649007e-06   p_cons 1.798013e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.217451e-06	k: 0	n:3030000
Cons ci ratio: 5.308068e-02	ci left: 1.749002e-03	ci right 1.844694e-03	k: 5443	n:3030000
KS ci ratio: 1.306665e+00	ci left: 1.139879e-06	ci right 5.202366e-06	k: 8	n:3030000
SYNPO2L   3030000 perm   4675 sec   (648 perm/sec)   p_kst 2.640264e-06   p_cons 1.796370e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.213446e-06	k: 0	n:3040000
Cons ci ratio: 5.301259e-02	ci left: 1.747792e-03	ci right 1.843292e-03	k: 5457	n:3040000
KS ci ratio: 1.306665e+00	ci left: 1.136130e-06	ci right 5.185253e-06	k: 8	n:3040000
SYNPO2L   3040000 perm   4703 sec   (646 perm/sec)   p_kst 2.631579e-06   p_cons 1.795066e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.209468e-06	k: 0	n:3050000
Cons ci ratio: 5.293507e-02	ci left: 1.747238e-03	ci right 1.842564e-03	k: 5473	n:3050000
KS ci ratio: 1.306665e+00	ci left: 1.132405e-06	ci right 5.168252e-06	k: 8	n:3050000
SYNPO2L   3050000 perm   4733 sec   (644 perm/sec)   p_kst 2.622951e-06   p_cons 1.794426e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.205515e-06	k: 0	n:3060000
Cons ci ratio: 5.286272e-02	ci left: 1.746366e-03	ci right 1.841509e-03	k: 5488	n:3060000
KS ci ratio: 1.306665e+00	ci left: 1.128704e-06	ci right 5.151362e-06	k: 8	n:3060000
SYNPO2L   3060000 perm   4762 sec   (643 perm/sec)   p_kst 2.614379e-06   p_cons 1.793464e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.201589e-06	k: 0	n:3070000
Cons ci ratio: 5.279066e-02	ci left: 1.745498e-03	ci right 1.840462e-03	k: 5503	n:3070000
KS ci ratio: 1.306665e+00	ci left: 1.125027e-06	ci right 5.134583e-06	k: 8	n:3070000
SYNPO2L   3070000 perm   4791 sec   (641 perm/sec)   p_kst 2.605863e-06   p_cons 1.792508e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.197687e-06	k: 0	n:3080000
Cons ci ratio: 5.272847e-02	ci left: 1.743996e-03	ci right 1.838762e-03	k: 5516	n:3080000
KS ci ratio: 1.306665e+00	ci left: 1.121375e-06	ci right 5.117912e-06	k: 8	n:3080000
SYNPO2L   3080000 perm   4820 sec   (639 perm/sec)   p_kst 2.597403e-06   p_cons 1.790909e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.193811e-06	k: 0	n:3090000
Cons ci ratio: 5.264743e-02	ci left: 1.743781e-03	ci right 1.838386e-03	k: 5533	n:3090000
KS ci ratio: 1.306665e+00	ci left: 1.117746e-06	ci right 5.101349e-06	k: 8	n:3090000
SYNPO2L   3090000 perm   4850 sec   (637 perm/sec)   p_kst 2.588997e-06   p_cons 1.790615e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.189960e-06	k: 0	n:3100000
Cons ci ratio: 5.256202e-02	ci left: 1.743886e-03	ci right 1.838338e-03	k: 5551	n:3100000
KS ci ratio: 1.306665e+00	ci left: 1.114140e-06	ci right 5.084893e-06	k: 8	n:3100000
SYNPO2L   3100000 perm   4879 sec   (635 perm/sec)   p_kst 2.580645e-06   p_cons 1.790645e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.186134e-06	k: 0	n:3110000
Cons ci ratio: 5.249118e-02	ci left: 1.743039e-03	ci right 1.837314e-03	k: 5566	n:3110000
KS ci ratio: 1.306665e+00	ci left: 1.110558e-06	ci right 5.068543e-06	k: 8	n:3110000
SYNPO2L   3110000 perm   4908 sec   (634 perm/sec)   p_kst 2.572347e-06   p_cons 1.789711e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.182332e-06	k: 0	n:3120000
Cons ci ratio: 5.243475e-02	ci left: 1.741248e-03	ci right 1.835322e-03	k: 5578	n:3120000
KS ci ratio: 1.306665e+00	ci left: 1.106998e-06	ci right 5.052298e-06	k: 8	n:3120000
SYNPO2L   3120000 perm   4938 sec   (632 perm/sec)   p_kst 2.564103e-06   p_cons 1.787821e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.178555e-06	k: 0	n:3130000
Cons ci ratio: 5.235036e-02	ci left: 1.741360e-03	ci right 1.835284e-03	k: 5596	n:3130000
KS ci ratio: 1.306665e+00	ci left: 1.103461e-06	ci right 5.036156e-06	k: 8	n:3130000
SYNPO2L   3130000 perm   4968 sec   (630 perm/sec)   p_kst 2.555911e-06   p_cons 1.787859e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.174802e-06	k: 0	n:3140000
Cons ci ratio: 5.226172e-02	ci left: 1.741786e-03	ci right 1.835569e-03	k: 5615	n:3140000
KS ci ratio: 1.306665e+00	ci left: 1.099947e-06	ci right 5.020118e-06	k: 8	n:3140000
SYNPO2L   3140000 perm   4997 sec   (628 perm/sec)   p_kst 2.547771e-06   p_cons 1.788217e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.171072e-06	k: 0	n:3150000
Cons ci ratio: 5.219674e-02	ci left: 1.740643e-03	ci right 1.834245e-03	k: 5629	n:3150000
KS ci ratio: 1.306665e+00	ci left: 1.096455e-06	ci right 5.004181e-06	k: 8	n:3150000
SYNPO2L   3150000 perm   5026 sec   (627 perm/sec)   p_kst 2.539683e-06   p_cons 1.786984e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.167366e-06	k: 0	n:3160000
Cons ci ratio: 5.212274e-02	ci left: 1.740132e-03	ci right 1.833569e-03	k: 5645	n:3160000
KS ci ratio: 1.306665e+00	ci left: 1.092985e-06	ci right 4.988345e-06	k: 8	n:3160000
SYNPO2L   3160000 perm   5056 sec   (625 perm/sec)   p_kst 2.531646e-06   p_cons 1.786392e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.163684e-06	k: 0	n:3170000
Cons ci ratio: 5.203525e-02	ci left: 1.740558e-03	ci right 1.833857e-03	k: 5664	n:3170000
KS ci ratio: 1.306665e+00	ci left: 1.089538e-06	ci right 4.972609e-06	k: 8	n:3170000
SYNPO2L   3170000 perm   5086 sec   (623 perm/sec)   p_kst 2.523659e-06   p_cons 1.786751e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.160024e-06	k: 0	n:3180000
Cons ci ratio: 5.196194e-02	ci left: 1.740051e-03	ci right 1.833187e-03	k: 5680	n:3180000
KS ci ratio: 1.306665e+00	ci left: 1.086111e-06	ci right 4.956972e-06	k: 8	n:3180000
SYNPO2L   3180000 perm   5116 sec   (622 perm/sec)   p_kst 2.515723e-06   p_cons 1.786164e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.156388e-06	k: 0	n:3190000
Cons ci ratio: 5.184792e-02	ci left: 1.742332e-03	ci right 1.835379e-03	k: 5705	n:3190000
KS ci ratio: 1.306665e+00	ci left: 1.082707e-06	ci right 4.941433e-06	k: 8	n:3190000
SYNPO2L   3190000 perm   5146 sec   (620 perm/sec)   p_kst 2.507837e-06   p_cons 1.788401e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.152774e-06	k: 0	n:3200000
Cons ci ratio: 5.175728e-02	ci left: 1.743056e-03	ci right 1.835974e-03	k: 5725	n:3200000
KS ci ratio: 1.306665e+00	ci left: 1.079323e-06	ci right 4.925991e-06	k: 8	n:3200000
SYNPO2L   3200000 perm   5175 sec   (618 perm/sec)   p_kst 2.500000e-06   p_cons 1.789063e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.149183e-06	k: 0	n:3210000
Cons ci ratio: 5.165360e-02	ci left: 1.744698e-03	ci right 1.837513e-03	k: 5748	n:3210000
KS ci ratio: 1.306665e+00	ci left: 1.075961e-06	ci right 4.910645e-06	k: 8	n:3210000
SYNPO2L   3210000 perm   5205 sec   (617 perm/sec)   p_kst 2.492212e-06   p_cons 1.790654e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.145614e-06	k: 0	n:3220000
Cons ci ratio: 5.158637e-02	ci left: 1.743878e-03	ci right 1.836524e-03	k: 5763	n:3220000
KS ci ratio: 1.306665e+00	ci left: 1.072619e-06	ci right 4.895394e-06	k: 8	n:3220000
SYNPO2L   3220000 perm   5235 sec   (615 perm/sec)   p_kst 2.484472e-06   p_cons 1.789752e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.142067e-06	k: 0	n:3230000
Cons ci ratio: 5.151047e-02	ci left: 1.743675e-03	ci right 1.836170e-03	k: 5780	n:3230000
KS ci ratio: 1.306665e+00	ci left: 1.069298e-06	ci right 4.880238e-06	k: 8	n:3230000
SYNPO2L   3230000 perm   5266 sec   (613 perm/sec)   p_kst 2.476780e-06   p_cons 1.789474e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.138542e-06	k: 0	n:3240000
Cons ci ratio: 5.143046e-02	ci left: 1.743777e-03	ci right 1.836129e-03	k: 5798	n:3240000
KS ci ratio: 1.306665e+00	ci left: 1.065998e-06	ci right 4.865176e-06	k: 8	n:3240000
SYNPO2L   3240000 perm   5297 sec   (612 perm/sec)   p_kst 2.469136e-06   p_cons 1.789506e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.135039e-06	k: 0	n:3250000
Cons ci ratio: 5.135967e-02	ci left: 1.743271e-03	ci right 1.835466e-03	k: 5814	n:3250000
KS ci ratio: 1.306665e+00	ci left: 1.062718e-06	ci right 4.850206e-06	k: 8	n:3250000
SYNPO2L   3250000 perm   5327 sec   (610 perm/sec)   p_kst 2.461538e-06   p_cons 1.788923e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.131557e-06	k: 0	n:3260000
Cons ci ratio: 5.128918e-02	ci left: 1.742769e-03	ci right 1.834807e-03	k: 5830	n:3260000
KS ci ratio: 1.306665e+00	ci left: 1.059458e-06	ci right 4.835328e-06	k: 8	n:3260000
SYNPO2L   3260000 perm   5358 sec   (608 perm/sec)   p_kst 2.453988e-06   p_cons 1.788344e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.128097e-06	k: 0	n:3270000
Cons ci ratio: 5.121020e-02	ci left: 1.742873e-03	ci right 1.834771e-03	k: 5848	n:3270000
KS ci ratio: 1.306665e+00	ci left: 1.056218e-06	ci right 4.820541e-06	k: 8	n:3270000
SYNPO2L   3270000 perm   5389 sec   (607 perm/sec)   p_kst 2.446483e-06   p_cons 1.788379e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.124658e-06	k: 0	n:3280000
Cons ci ratio: 5.111413e-02	ci left: 1.744181e-03	ci right 1.835970e-03	k: 5870	n:3280000
KS ci ratio: 1.306665e+00	ci left: 1.052998e-06	ci right 4.805845e-06	k: 8	n:3280000
SYNPO2L   3280000 perm   5419 sec   (605 perm/sec)   p_kst 2.439024e-06   p_cons 1.789634e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.121239e-06	k: 0	n:3290000
Cons ci ratio: 5.105332e-02	ci left: 1.743081e-03	ci right 1.834699e-03	k: 5884	n:3290000
KS ci ratio: 1.306665e+00	ci left: 1.049798e-06	ci right 4.791237e-06	k: 8	n:3290000
SYNPO2L   3290000 perm   5450 sec   (604 perm/sec)   p_kst 2.431611e-06   p_cons 1.788450e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.117842e-06	k: 0	n:3300000
Cons ci ratio: 5.097542e-02	ci left: 1.743184e-03	ci right 1.834664e-03	k: 5902	n:3300000
KS ci ratio: 1.306665e+00	ci left: 1.046616e-06	ci right 4.776718e-06	k: 8	n:3300000
SYNPO2L   3300000 perm   5481 sec   (602 perm/sec)   p_kst 2.424242e-06   p_cons 1.788485e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.114464e-06	k: 0	n:3310000
Cons ci ratio: 5.086347e-02	ci left: 1.745672e-03	ci right 1.837076e-03	k: 5928	n:3310000
KS ci ratio: 1.239611e+00	ci left: 1.243316e-06	ci right 5.161566e-06	k: 9	n:3310000
SYNPO2L   3310000 perm   5513 sec   (600 perm/sec)   p_kst 2.719033e-06   p_cons 1.790937e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.111108e-06	k: 0	n:3320000
Cons ci ratio: 5.078216e-02	ci left: 1.746064e-03	ci right 1.837338e-03	k: 5947	n:3320000
KS ci ratio: 1.239611e+00	ci left: 1.239571e-06	ci right 5.146019e-06	k: 9	n:3320000
SYNPO2L   3320000 perm   5543 sec   (599 perm/sec)   p_kst 2.710843e-06   p_cons 1.791265e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.107771e-06	k: 0	n:3330000
Cons ci ratio: 5.070549e-02	ci left: 1.746158e-03	ci right 1.837295e-03	k: 5965	n:3330000
KS ci ratio: 1.239611e+00	ci left: 1.235848e-06	ci right 5.130565e-06	k: 9	n:3330000
SYNPO2L   3330000 perm   5575 sec   (597 perm/sec)   p_kst 2.702703e-06   p_cons 1.791291e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.104454e-06	k: 0	n:3340000
Cons ci ratio: 5.063341e-02	ci left: 1.745955e-03	ci right 1.836948e-03	k: 5982	n:3340000
KS ci ratio: 1.239611e+00	ci left: 1.232148e-06	ci right 5.115204e-06	k: 9	n:3340000
SYNPO2L   3340000 perm   5606 sec   (596 perm/sec)   p_kst 2.694611e-06   p_cons 1.791018e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.101157e-06	k: 0	n:3350000
Cons ci ratio: 5.054898e-02	ci left: 1.746638e-03	ci right 1.837510e-03	k: 6002	n:3350000
KS ci ratio: 1.239611e+00	ci left: 1.228470e-06	ci right 5.099935e-06	k: 9	n:3350000
SYNPO2L   3350000 perm   5638 sec   (594 perm/sec)   p_kst 2.686567e-06   p_cons 1.791642e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.097880e-06	k: 0	n:3360000
Cons ci ratio: 5.046077e-02	ci left: 1.747611e-03	ci right 1.838370e-03	k: 6023	n:3360000
KS ci ratio: 1.239611e+00	ci left: 1.224814e-06	ci right 5.084757e-06	k: 9	n:3360000
SYNPO2L   3360000 perm   5669 sec   (593 perm/sec)   p_kst 2.678571e-06   p_cons 1.792560e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.094622e-06	k: 0	n:3370000
Cons ci ratio: 5.037719e-02	ci left: 1.748285e-03	ci right 1.838925e-03	k: 6043	n:3370000
KS ci ratio: 1.239611e+00	ci left: 1.221180e-06	ci right 5.069669e-06	k: 9	n:3370000
SYNPO2L   3370000 perm   5701 sec   (591 perm/sec)   p_kst 2.670623e-06   p_cons 1.793175e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.091384e-06	k: 0	n:3380000
Cons ci ratio: 5.028158e-02	ci left: 1.749831e-03	ci right 1.840375e-03	k: 6066	n:3380000
KS ci ratio: 1.239611e+00	ci left: 1.217567e-06	ci right 5.054670e-06	k: 9	n:3380000
SYNPO2L   3380000 perm   5732 sec   (590 perm/sec)   p_kst 2.662722e-06   p_cons 1.794675e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.088164e-06	k: 0	n:3390000
Cons ci ratio: 5.024853e-02	ci left: 1.747000e-03	ci right 1.837335e-03	k: 6074	n:3390000
KS ci ratio: 1.239611e+00	ci left: 1.213975e-06	ci right 5.039759e-06	k: 9	n:3390000
SYNPO2L   3390000 perm   5764 sec   (588 perm/sec)   p_kst 2.654867e-06   p_cons 1.791740e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.084964e-06	k: 0	n:3400000
Cons ci ratio: 5.015364e-02	ci left: 1.748541e-03	ci right 1.838781e-03	k: 6097	n:3400000
KS ci ratio: 1.239611e+00	ci left: 1.210405e-06	ci right 5.024936e-06	k: 9	n:3400000
SYNPO2L   3400000 perm   5796 sec   (587 perm/sec)   p_kst 2.647059e-06   p_cons 1.793235e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.081782e-06	k: 0	n:3410000
Cons ci ratio: 5.005110e-02	ci left: 1.750653e-03	ci right 1.840812e-03	k: 6122	n:3410000
KS ci ratio: 1.239611e+00	ci left: 1.206855e-06	ci right 5.010200e-06	k: 9	n:3410000
SYNPO2L   3410000 perm   5828 sec   (585 perm/sec)   p_kst 2.639296e-06   p_cons 1.795308e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.078619e-06	k: 0	n:3420000
Cons ci ratio: 5.000217e-02	ci left: 1.748999e-03	ci right 1.838982e-03	k: 6134	n:3420000
KS ci ratio: 1.239611e+00	ci left: 1.203326e-06	ci right 4.995551e-06	k: 9	n:3420000
SYNPO2L   3420000 perm   5861 sec   (584 perm/sec)   p_kst 2.631579e-06   p_cons 1.793567e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.075474e-06	k: 0	n:3430000
Cons ci ratio: 4.994524e-02	ci left: 1.747931e-03	ci right 1.837753e-03	k: 6148	n:3430000
KS ci ratio: 1.239611e+00	ci left: 1.199818e-06	ci right 4.980986e-06	k: 9	n:3430000
SYNPO2L   3430000 perm   5893 sec   (582 perm/sec)   p_kst 2.623907e-06   p_cons 1.792420e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.072348e-06	k: 0	n:3440000
Cons ci ratio: 4.984801e-02	ci left: 1.749739e-03	ci right 1.839475e-03	k: 6172	n:3440000
KS ci ratio: 1.239611e+00	ci left: 1.196330e-06	ci right 4.966507e-06	k: 9	n:3440000
SYNPO2L   3440000 perm   5925 sec   (581 perm/sec)   p_kst 2.616279e-06   p_cons 1.794186e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.069240e-06	k: 0	n:3450000
Cons ci ratio: 4.977147e-02	ci left: 1.750106e-03	ci right 1.839719e-03	k: 6191	n:3450000
KS ci ratio: 1.239611e+00	ci left: 1.192862e-06	ci right 4.952111e-06	k: 9	n:3450000
SYNPO2L   3450000 perm   5957 sec   (579 perm/sec)   p_kst 2.608696e-06   p_cons 1.794493e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.066150e-06	k: 0	n:3460000
Cons ci ratio: 4.970730e-02	ci left: 1.749615e-03	ci right 1.839083e-03	k: 6207	n:3460000
KS ci ratio: 1.239611e+00	ci left: 1.189415e-06	ci right 4.937799e-06	k: 9	n:3460000
SYNPO2L   3460000 perm   5989 sec   (578 perm/sec)   p_kst 2.601156e-06   p_cons 1.793931e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.063077e-06	k: 0	n:3470000
Cons ci ratio: 4.961943e-02	ci left: 1.750834e-03	ci right 1.840202e-03	k: 6229	n:3470000
KS ci ratio: 1.239611e+00	ci left: 1.185987e-06	ci right 4.923569e-06	k: 9	n:3470000
SYNPO2L   3470000 perm   6022 sec   (576 perm/sec)   p_kst 2.593660e-06   p_cons 1.795101e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.060022e-06	k: 0	n:3480000
Cons ci ratio: 4.955982e-02	ci left: 1.750060e-03	ci right 1.839278e-03	k: 6244	n:3480000
KS ci ratio: 1.239611e+00	ci left: 1.182579e-06	ci right 4.909421e-06	k: 9	n:3480000
SYNPO2L   3480000 perm   6053 sec   (575 perm/sec)   p_kst 2.586207e-06   p_cons 1.794253e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.056985e-06	k: 0	n:3490000
Cons ci ratio: 4.945692e-02	ci left: 1.752403e-03	ci right 1.841550e-03	k: 6270	n:3490000
KS ci ratio: 1.239611e+00	ci left: 1.179191e-06	ci right 4.895353e-06	k: 9	n:3490000
SYNPO2L   3490000 perm   6086 sec   (573 perm/sec)   p_kst 2.578797e-06   p_cons 1.796562e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.053965e-06	k: 0	n:3500000
Cons ci ratio: 4.940183e-02	ci left: 1.751347e-03	ci right 1.840338e-03	k: 6284	n:3500000
KS ci ratio: 1.239611e+00	ci left: 1.175822e-06	ci right 4.881367e-06	k: 9	n:3500000
SYNPO2L   3500000 perm   6120 sec   (572 perm/sec)   p_kst 2.571429e-06   p_cons 1.795429e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.050962e-06	k: 0	n:3510000
Cons ci ratio: 4.935086e-02	ci left: 1.750015e-03	ci right 1.838844e-03	k: 6297	n:3510000
KS ci ratio: 1.239611e+00	ci left: 1.172472e-06	ci right 4.867460e-06	k: 9	n:3510000
SYNPO2L   3510000 perm   6153 sec   (570 perm/sec)   p_kst 2.564103e-06   p_cons 1.794017e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.047977e-06	k: 0	n:3520000
Cons ci ratio: 4.926095e-02	ci left: 1.751497e-03	ci right 1.840235e-03	k: 6320	n:3520000
KS ci ratio: 1.239611e+00	ci left: 1.169141e-06	ci right 4.853632e-06	k: 9	n:3520000
SYNPO2L   3520000 perm   6185 sec   (569 perm/sec)   p_kst 2.556818e-06   p_cons 1.795455e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.045008e-06	k: 0	n:3530000
Cons ci ratio: 4.920652e-02	ci left: 1.750453e-03	ci right 1.839036e-03	k: 6334	n:3530000
KS ci ratio: 1.239611e+00	ci left: 1.165829e-06	ci right 4.839882e-06	k: 9	n:3530000
SYNPO2L   3530000 perm   6218 sec   (568 perm/sec)   p_kst 2.549575e-06   p_cons 1.794334e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.042056e-06	k: 0	n:3540000
Cons ci ratio: 4.914451e-02	ci left: 1.749972e-03	ci right 1.838417e-03	k: 6350	n:3540000
KS ci ratio: 1.239611e+00	ci left: 1.162535e-06	ci right 4.826210e-06	k: 9	n:3540000
SYNPO2L   3540000 perm   6251 sec   (566 perm/sec)   p_kst 2.542373e-06   p_cons 1.793785e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.039120e-06	k: 0	n:3550000
Cons ci ratio: 4.905959e-02	ci left: 1.751164e-03	ci right 1.839511e-03	k: 6372	n:3550000
KS ci ratio: 1.239611e+00	ci left: 1.159261e-06	ci right 4.812615e-06	k: 9	n:3550000
SYNPO2L   3550000 perm   6285 sec   (565 perm/sec)   p_kst 2.535211e-06   p_cons 1.794930e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.036202e-06	k: 0	n:3560000
Cons ci ratio: 4.900197e-02	ci left: 1.750406e-03	ci right 1.838609e-03	k: 6387	n:3560000
KS ci ratio: 1.239611e+00	ci left: 1.156004e-06	ci right 4.799097e-06	k: 9	n:3560000
SYNPO2L   3560000 perm   6318 sec   (563 perm/sec)   p_kst 2.528090e-06   p_cons 1.794101e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.033299e-06	k: 0	n:3570000
Cons ci ratio: 4.893308e-02	ci left: 1.750484e-03	ci right 1.838563e-03	k: 6405	n:3570000
KS ci ratio: 1.239611e+00	ci left: 1.152766e-06	ci right 4.785654e-06	k: 9	n:3570000
SYNPO2L   3570000 perm   6351 sec   (562 perm/sec)   p_kst 2.521008e-06   p_cons 1.794118e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.030413e-06	k: 0	n:3580000
Cons ci ratio: 4.885305e-02	ci left: 1.751388e-03	ci right 1.839365e-03	k: 6426	n:3580000
KS ci ratio: 1.239611e+00	ci left: 1.149546e-06	ci right 4.772286e-06	k: 9	n:3580000
SYNPO2L   3580000 perm   6385 sec   (561 perm/sec)   p_kst 2.513966e-06   p_cons 1.794972e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.027542e-06	k: 0	n:3590000
Cons ci ratio: 4.878857e-02	ci left: 1.751187e-03	ci right 1.839034e-03	k: 6443	n:3590000
KS ci ratio: 1.239611e+00	ci left: 1.146344e-06	ci right 4.758993e-06	k: 9	n:3590000
SYNPO2L   3590000 perm   6419 sec   (559 perm/sec)   p_kst 2.506964e-06   p_cons 1.794708e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.024688e-06	k: 0	n:3600000
Cons ci ratio: 4.869039e-02	ci left: 1.753457e-03	ci right 1.841236e-03	k: 6469	n:3600000
KS ci ratio: 1.239611e+00	ci left: 1.143160e-06	ci right 4.745773e-06	k: 9	n:3600000
SYNPO2L   3600000 perm   6453 sec   (558 perm/sec)   p_kst 2.500000e-06   p_cons 1.796944e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.021850e-06	k: 0	n:3610000
Cons ci ratio: 4.863782e-02	ci left: 1.752431e-03	ci right 1.840061e-03	k: 6483	n:3610000
KS ci ratio: 1.239611e+00	ci left: 1.139993e-06	ci right 4.732627e-06	k: 9	n:3610000
SYNPO2L   3610000 perm   6486 sec   (557 perm/sec)   p_kst 2.493075e-06   p_cons 1.795845e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.019027e-06	k: 0	n:3620000
Cons ci ratio: 4.854428e-02	ci left: 1.754412e-03	ci right 1.841968e-03	k: 6508	n:3620000
KS ci ratio: 1.239611e+00	ci left: 1.136844e-06	ci right 4.719554e-06	k: 9	n:3620000
SYNPO2L   3620000 perm   6519 sec   (555 perm/sec)   p_kst 2.486188e-06   p_cons 1.797790e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.016220e-06	k: 0	n:3630000
Cons ci ratio: 4.850709e-02	ci left: 1.752300e-03	ci right 1.839682e-03	k: 6518	n:3630000
KS ci ratio: 1.239611e+00	ci left: 1.133712e-06	ci right 4.706552e-06	k: 9	n:3630000
SYNPO2L   3630000 perm   6554 sec   (554 perm/sec)   p_kst 2.479339e-06   p_cons 1.795592e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.013428e-06	k: 0	n:3640000
Cons ci ratio: 4.844026e-02	ci left: 1.752371e-03	ci right 1.839633e-03	k: 6536	n:3640000
KS ci ratio: 1.239611e+00	ci left: 1.130598e-06	ci right 4.693622e-06	k: 9	n:3640000
SYNPO2L   3640000 perm   6588 sec   (553 perm/sec)   p_kst 2.472527e-06   p_cons 1.795604e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.010651e-06	k: 0	n:3650000
Cons ci ratio: 4.834416e-02	ci left: 1.754608e-03	ci right 1.841802e-03	k: 6562	n:3650000
KS ci ratio: 1.239611e+00	ci left: 1.127500e-06	ci right 4.680763e-06	k: 9	n:3650000
SYNPO2L   3650000 perm   6622 sec   (551 perm/sec)   p_kst 2.465753e-06   p_cons 1.797808e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.007890e-06	k: 0	n:3660000
Cons ci ratio: 4.828167e-02	ci left: 1.754402e-03	ci right 1.841471e-03	k: 6579	n:3660000
KS ci ratio: 1.239611e+00	ci left: 1.124419e-06	ci right 4.667974e-06	k: 9	n:3660000
SYNPO2L   3660000 perm   6656 sec   (550 perm/sec)   p_kst 2.459016e-06   p_cons 1.797541e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.005144e-06	k: 0	n:3670000
Cons ci ratio: 4.822309e-02	ci left: 1.753929e-03	ci right 1.840866e-03	k: 6595	n:3670000
KS ci ratio: 1.239611e+00	ci left: 1.121356e-06	ci right 4.655255e-06	k: 9	n:3670000
SYNPO2L   3670000 perm   6690 sec   (549 perm/sec)   p_kst 2.452316e-06   p_cons 1.797003e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 1.002412e-06	k: 0	n:3680000
Cons ci ratio: 4.817202e-02	ci left: 1.752921e-03	ci right 1.839713e-03	k: 6609	n:3680000
KS ci ratio: 1.239611e+00	ci left: 1.118308e-06	ci right 4.642605e-06	k: 9	n:3680000
SYNPO2L   3680000 perm   6725 sec   (547 perm/sec)   p_kst 2.445652e-06   p_cons 1.795924e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.996958e-07	k: 0	n:3690000
Cons ci ratio: 4.811748e-02	ci left: 1.752187e-03	ci right 1.838842e-03	k: 6624	n:3690000
KS ci ratio: 1.239611e+00	ci left: 1.115278e-06	ci right 4.630023e-06	k: 9	n:3690000
SYNPO2L   3690000 perm   6759 sec   (546 perm/sec)   p_kst 2.439024e-06   p_cons 1.795122e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.969940e-07	k: 0	n:3700000
Cons ci ratio: 4.805949e-02	ci left: 1.751724e-03	ci right 1.838248e-03	k: 6640	n:3700000
KS ci ratio: 1.239611e+00	ci left: 1.112264e-06	ci right 4.617509e-06	k: 9	n:3700000
SYNPO2L   3700000 perm   6794 sec   (545 perm/sec)   p_kst 2.432432e-06   p_cons 1.794595e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.943066e-07	k: 0	n:3710000
Cons ci ratio: 4.800171e-02	ci left: 1.751263e-03	ci right 1.837658e-03	k: 6656	n:3710000
KS ci ratio: 1.239611e+00	ci left: 1.109266e-06	ci right 4.605063e-06	k: 9	n:3710000
SYNPO2L   3710000 perm   6828 sec   (543 perm/sec)   p_kst 2.425876e-06   p_cons 1.794070e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.916338e-07	k: 0	n:3720000
Cons ci ratio: 4.792257e-02	ci left: 1.752398e-03	ci right 1.838703e-03	k: 6678	n:3720000
KS ci ratio: 1.239611e+00	ci left: 1.106284e-06	ci right 4.592684e-06	k: 9	n:3720000
SYNPO2L   3720000 perm   6863 sec   (542 perm/sec)   p_kst 2.419355e-06   p_cons 1.795161e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.889752e-07	k: 0	n:3730000
Cons ci ratio: 4.787603e-02	ci left: 1.751144e-03	ci right 1.837300e-03	k: 6691	n:3730000
KS ci ratio: 1.239611e+00	ci left: 1.103318e-06	ci right 4.580371e-06	k: 9	n:3730000
SYNPO2L   3730000 perm   6897 sec   (541 perm/sec)   p_kst 2.412869e-06   p_cons 1.793834e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.863309e-07	k: 0	n:3740000
Cons ci ratio: 4.779393e-02	ci left: 1.752538e-03	ci right 1.838611e-03	k: 6714	n:3740000
KS ci ratio: 1.239611e+00	ci left: 1.100368e-06	ci right 4.568124e-06	k: 9	n:3740000
SYNPO2L   3740000 perm   6932 sec   (540 perm/sec)   p_kst 2.406417e-06   p_cons 1.795187e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.837007e-07	k: 0	n:3750000
Cons ci ratio: 4.771581e-02	ci left: 1.753661e-03	ci right 1.839645e-03	k: 6736	n:3750000
KS ci ratio: 1.239611e+00	ci left: 1.097433e-06	ci right 4.555943e-06	k: 9	n:3750000
SYNPO2L   3750000 perm   6967 sec   (538 perm/sec)   p_kst 2.400000e-06   p_cons 1.796267e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.810845e-07	k: 0	n:3760000
Cons ci ratio: 4.764159e-02	ci left: 1.754515e-03	ci right 1.840404e-03	k: 6757	n:3760000
KS ci ratio: 1.239611e+00	ci left: 1.094515e-06	ci right 4.543826e-06	k: 9	n:3760000
SYNPO2L   3760000 perm   7002 sec   (537 perm/sec)   p_kst 2.393617e-06   p_cons 1.797074e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.784821e-07	k: 0	n:3770000
Cons ci ratio: 4.757476e-02	ci left: 1.754841e-03	ci right 1.840622e-03	k: 6776	n:3770000
KS ci ratio: 1.239611e+00	ci left: 1.091611e-06	ci right 4.531773e-06	k: 9	n:3770000
SYNPO2L   3770000 perm   7036 sec   (536 perm/sec)   p_kst 2.387268e-06   p_cons 1.797347e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.758936e-07	k: 0	n:3780000
Cons ci ratio: 4.749770e-02	ci left: 1.755950e-03	ci right 1.841642e-03	k: 6798	n:3780000
KS ci ratio: 1.239611e+00	ci left: 1.088724e-06	ci right 4.519784e-06	k: 9	n:3780000
SYNPO2L   3780000 perm   7071 sec   (535 perm/sec)   p_kst 2.380952e-06   p_cons 1.798413e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.733186e-07	k: 0	n:3790000
Cons ci ratio: 4.744192e-02	ci left: 1.755488e-03	ci right 1.841054e-03	k: 6814	n:3790000
KS ci ratio: 1.239611e+00	ci left: 1.085851e-06	ci right 4.507859e-06	k: 9	n:3790000
SYNPO2L   3790000 perm   7107 sec   (533 perm/sec)   p_kst 2.374670e-06   p_cons 1.797889e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.707573e-07	k: 0	n:3800000
Cons ci ratio: 4.738287e-02	ci left: 1.755289e-03	ci right 1.840736e-03	k: 6831	n:3800000
KS ci ratio: 1.239611e+00	ci left: 1.082993e-06	ci right 4.495996e-06	k: 9	n:3800000
SYNPO2L   3800000 perm   7142 sec   (532 perm/sec)   p_kst 2.368421e-06   p_cons 1.797632e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.682094e-07	k: 0	n:3810000
Cons ci ratio: 4.734134e-02	ci left: 1.753794e-03	ci right 1.839092e-03	k: 6843	n:3810000
KS ci ratio: 1.239611e+00	ci left: 1.080151e-06	ci right 4.484196e-06	k: 9	n:3810000
SYNPO2L   3810000 perm   7178 sec   (531 perm/sec)   p_kst 2.362205e-06   p_cons 1.796063e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.656748e-07	k: 0	n:3820000
Cons ci ratio: 4.727576e-02	ci left: 1.754118e-03	ci right 1.839310e-03	k: 6862	n:3820000
KS ci ratio: 1.239611e+00	ci left: 1.077323e-06	ci right 4.472457e-06	k: 9	n:3820000
SYNPO2L   3820000 perm   7213 sec   (530 perm/sec)   p_kst 2.356021e-06   p_cons 1.796335e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.631534e-07	k: 0	n:3830000
Cons ci ratio: 4.722076e-02	ci left: 1.753667e-03	ci right 1.838734e-03	k: 6878	n:3830000
KS ci ratio: 1.239611e+00	ci left: 1.074510e-06	ci right 4.460779e-06	k: 9	n:3830000
SYNPO2L   3830000 perm   7249 sec   (528 perm/sec)   p_kst 2.349869e-06   p_cons 1.795822e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.606452e-07	k: 0	n:3840000
Cons ci ratio: 4.715910e-02	ci left: 1.753732e-03	ci right 1.838689e-03	k: 6896	n:3840000
KS ci ratio: 1.239611e+00	ci left: 1.071712e-06	ci right 4.449163e-06	k: 9	n:3840000
SYNPO2L   3840000 perm   7284 sec   (527 perm/sec)   p_kst 2.343750e-06   p_cons 1.795833e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.581500e-07	k: 0	n:3850000
Cons ci ratio: 4.709086e-02	ci left: 1.754310e-03	ci right 1.839169e-03	k: 6916	n:3850000
KS ci ratio: 1.239611e+00	ci left: 1.068929e-06	ci right 4.437607e-06	k: 9	n:3850000
SYNPO2L   3850000 perm   7319 sec   (526 perm/sec)   p_kst 2.337662e-06   p_cons 1.796364e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.556678e-07	k: 0	n:3860000
Cons ci ratio: 4.706712e-02	ci left: 1.751558e-03	ci right 1.836239e-03	k: 6923	n:3860000
KS ci ratio: 1.239611e+00	ci left: 1.066159e-06	ci right 4.426110e-06	k: 9	n:3860000
SYNPO2L   3860000 perm   7355 sec   (525 perm/sec)   p_kst 2.331606e-06   p_cons 1.793523e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.531984e-07	k: 0	n:3870000
Cons ci ratio: 4.701284e-02	ci left: 1.751117e-03	ci right 1.835677e-03	k: 6939	n:3870000
KS ci ratio: 1.239611e+00	ci left: 1.063404e-06	ci right 4.414673e-06	k: 9	n:3870000
SYNPO2L   3870000 perm   7391 sec   (524 perm/sec)   p_kst 2.325581e-06   p_cons 1.793023e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.507417e-07	k: 0	n:3880000
Cons ci ratio: 4.694861e-02	ci left: 1.751444e-03	ci right 1.835901e-03	k: 6958	n:3880000
KS ci ratio: 1.239611e+00	ci left: 1.060664e-06	ci right 4.403295e-06	k: 9	n:3880000
SYNPO2L   3880000 perm   7427 sec   (522 perm/sec)   p_kst 2.319588e-06   p_cons 1.793299e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.482976e-07	k: 0	n:3890000
Cons ci ratio: 4.686447e-02	ci left: 1.753293e-03	ci right 1.837683e-03	k: 6983	n:3890000
KS ci ratio: 1.239611e+00	ci left: 1.057937e-06	ci right 4.391976e-06	k: 9	n:3890000
SYNPO2L   3890000 perm   7463 sec   (521 perm/sec)   p_kst 2.313625e-06   p_cons 1.795116e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.458661e-07	k: 0	n:3900000
Cons ci ratio: 4.682765e-02	ci left: 1.751584e-03	ci right 1.835825e-03	k: 6994	n:3900000
KS ci ratio: 1.239611e+00	ci left: 1.055224e-06	ci right 4.380714e-06	k: 9	n:3900000
SYNPO2L   3900000 perm   7499 sec   (520 perm/sec)   p_kst 2.307692e-06   p_cons 1.793333e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.434470e-07	k: 0	n:3910000
Cons ci ratio: 4.675416e-02	ci left: 1.752665e-03	ci right 1.836822e-03	k: 7016	n:3910000
KS ci ratio: 1.239611e+00	ci left: 1.052526e-06	ci right 4.369510e-06	k: 9	n:3910000
SYNPO2L   3910000 perm   7535 sec   (519 perm/sec)   p_kst 2.301790e-06   p_cons 1.794373e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.410402e-07	k: 0	n:3920000
Cons ci ratio: 4.669763e-02	ci left: 1.752480e-03	ci right 1.836524e-03	k: 7033	n:3920000
KS ci ratio: 1.239611e+00	ci left: 1.049841e-06	ci right 4.358364e-06	k: 9	n:3920000
SYNPO2L   3920000 perm   7572 sec   (518 perm/sec)   p_kst 2.295918e-06   p_cons 1.794133e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.386457e-07	k: 0	n:3930000
Cons ci ratio: 4.660821e-02	ci left: 1.754811e-03	ci right 1.838801e-03	k: 7060	n:3930000
KS ci ratio: 1.239611e+00	ci left: 1.047169e-06	ci right 4.347274e-06	k: 9	n:3930000
SYNPO2L   3930000 perm   7609 sec   (516 perm/sec)   p_kst 2.290076e-06   p_cons 1.796438e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.362634e-07	k: 0	n:3940000
Cons ci ratio: 4.651601e-02	ci left: 1.757381e-03	ci right 1.841323e-03	k: 7088	n:3940000
KS ci ratio: 1.239611e+00	ci left: 1.044511e-06	ci right 4.336240e-06	k: 9	n:3940000
SYNPO2L   3940000 perm   7647 sec   (515 perm/sec)   p_kst 2.284264e-06   p_cons 1.798985e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.338931e-07	k: 0	n:3950000
Cons ci ratio: 4.646689e-02	ci left: 1.756686e-03	ci right 1.840503e-03	k: 7103	n:3950000
KS ci ratio: 1.239611e+00	ci left: 1.041867e-06	ci right 4.325262e-06	k: 9	n:3950000
SYNPO2L   3950000 perm   7684 sec   (514 perm/sec)   p_kst 2.278481e-06   p_cons 1.798228e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.315348e-07	k: 0	n:3960000
Cons ci ratio: 4.640814e-02	ci left: 1.756742e-03	ci right 1.840454e-03	k: 7121	n:3960000
KS ci ratio: 1.239611e+00	ci left: 1.039236e-06	ci right 4.314340e-06	k: 9	n:3960000
SYNPO2L   3960000 perm   7720 sec   (513 perm/sec)   p_kst 2.272727e-06   p_cons 1.798232e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.291883e-07	k: 0	n:3970000
Cons ci ratio: 4.635611e-02	ci left: 1.756301e-03	ci right 1.839895e-03	k: 7137	n:3970000
KS ci ratio: 1.239611e+00	ci left: 1.036618e-06	ci right 4.303473e-06	k: 9	n:3970000
SYNPO2L   3970000 perm   7757 sec   (512 perm/sec)   p_kst 2.267003e-06   p_cons 1.797733e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.268537e-07	k: 0	n:3980000
Cons ci ratio: 4.629777e-02	ci left: 1.756358e-03	ci right 1.839847e-03	k: 7155	n:3980000
KS ci ratio: 1.239611e+00	ci left: 1.034014e-06	ci right 4.292660e-06	k: 9	n:3980000
SYNPO2L   3980000 perm   7794 sec   (511 perm/sec)   p_kst 2.261307e-06   p_cons 1.797739e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.245308e-07	k: 0	n:3990000
Cons ci ratio: 4.622352e-02	ci left: 1.757654e-03	ci right 1.841067e-03	k: 7178	n:3990000
KS ci ratio: 1.239611e+00	ci left: 1.031422e-06	ci right 4.281901e-06	k: 9	n:3990000
SYNPO2L   3990000 perm   7831 sec   (510 perm/sec)   p_kst 2.255639e-06   p_cons 1.798997e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.222194e-07	k: 0	n:4000000
Cons ci ratio: 4.614641e-02	ci left: 1.759191e-03	ci right 1.842533e-03	k: 7202	n:4000000
KS ci ratio: 1.239611e+00	ci left: 1.028844e-06	ci right 4.271197e-06	k: 9	n:4000000
SYNPO2L   4000000 perm   7868 sec   (508 perm/sec)   p_kst 2.250000e-06   p_cons 1.800500e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.199196e-07	k: 0	n:4010000
Cons ci ratio: 4.610485e-02	ci left: 1.758008e-03	ci right 1.841218e-03	k: 7215	n:4010000
KS ci ratio: 1.239611e+00	ci left: 1.026278e-06	ci right 4.260545e-06	k: 9	n:4010000
SYNPO2L   4010000 perm   7906 sec   (507 perm/sec)   p_kst 2.244389e-06   p_cons 1.799252e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.176313e-07	k: 0	n:4020000
Cons ci ratio: 4.606979e-02	ci left: 1.756340e-03	ci right 1.839405e-03	k: 7226	n:4020000
KS ci ratio: 1.239611e+00	ci left: 1.023725e-06	ci right 4.249947e-06	k: 9	n:4020000
SYNPO2L   4020000 perm   7943 sec   (506 perm/sec)   p_kst 2.238806e-06   p_cons 1.797512e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.153543e-07	k: 0	n:4030000
Cons ci ratio: 4.602526e-02	ci left: 1.755415e-03	ci right 1.838355e-03	k: 7240	n:4030000
KS ci ratio: 1.239611e+00	ci left: 1.021185e-06	ci right 4.239401e-06	k: 9	n:4030000
SYNPO2L   4030000 perm   7980 sec   (505 perm/sec)   p_kst 2.233251e-06   p_cons 1.796526e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.130886e-07	k: 0	n:4040000
Cons ci ratio: 4.597450e-02	ci left: 1.754985e-03	ci right 1.837811e-03	k: 7256	n:4040000
KS ci ratio: 1.239611e+00	ci left: 1.018657e-06	ci right 4.228908e-06	k: 9	n:4040000
SYNPO2L   4040000 perm   8018 sec   (504 perm/sec)   p_kst 2.227723e-06   p_cons 1.796040e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.108340e-07	k: 0	n:4050000
Cons ci ratio: 4.592708e-02	ci left: 1.754313e-03	ci right 1.837019e-03	k: 7271	n:4050000
KS ci ratio: 1.239611e+00	ci left: 1.016142e-06	ci right 4.218466e-06	k: 9	n:4050000
SYNPO2L   4050000 perm   8055 sec   (503 perm/sec)   p_kst 2.222222e-06   p_cons 1.795309e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.085906e-07	k: 0	n:4060000
Cons ci ratio: 4.585774e-02	ci left: 1.755349e-03	ci right 1.837975e-03	k: 7293	n:4060000
KS ci ratio: 1.239611e+00	ci left: 1.013639e-06	ci right 4.208075e-06	k: 9	n:4060000
SYNPO2L   4060000 perm   8093 sec   (502 perm/sec)   p_kst 2.216749e-06   p_cons 1.796305e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.063582e-07	k: 0	n:4070000
Cons ci ratio: 4.580126e-02	ci left: 1.755408e-03	ci right 1.837933e-03	k: 7311	n:4070000
KS ci ratio: 1.239611e+00	ci left: 1.011149e-06	ci right 4.197736e-06	k: 9	n:4070000
SYNPO2L   4070000 perm   8131 sec   (501 perm/sec)   p_kst 2.211302e-06   p_cons 1.796314e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.041367e-07	k: 0	n:4080000
Cons ci ratio: 4.576689e-02	ci left: 1.753770e-03	ci right 1.836155e-03	k: 7322	n:4080000
KS ci ratio: 1.239611e+00	ci left: 1.008670e-06	ci right 4.187448e-06	k: 9	n:4080000
SYNPO2L   4080000 perm   8168 sec   (499 perm/sec)   p_kst 2.205882e-06   p_cons 1.794608e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 9.019261e-07	k: 0	n:4090000
Cons ci ratio: 4.571075e-02	ci left: 1.753833e-03	ci right 1.836117e-03	k: 7340	n:4090000
KS ci ratio: 1.239611e+00	ci left: 1.006204e-06	ci right 4.177209e-06	k: 9	n:4090000
SYNPO2L   4090000 perm   8207 sec   (498 perm/sec)   p_kst 2.200489e-06   p_cons 1.794621e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.997263e-07	k: 0	n:4100000
Cons ci ratio: 4.566724e-02	ci left: 1.752931e-03	ci right 1.835092e-03	k: 7354	n:4100000
KS ci ratio: 1.239611e+00	ci left: 1.003750e-06	ci right 4.167021e-06	k: 9	n:4100000
SYNPO2L   4100000 perm   8244 sec   (497 perm/sec)   p_kst 2.195122e-06   p_cons 1.793659e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.975372e-07	k: 0	n:4110000
Cons ci ratio: 4.559288e-02	ci left: 1.754439e-03	ci right 1.836533e-03	k: 7378	n:4110000
KS ci ratio: 1.239611e+00	ci left: 1.001308e-06	ci right 4.156882e-06	k: 9	n:4110000
SYNPO2L   4110000 perm   8283 sec   (496 perm/sec)   p_kst 2.189781e-06   p_cons 1.795134e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.953587e-07	k: 0	n:4120000
Cons ci ratio: 4.554354e-02	ci left: 1.754020e-03	ci right 1.836003e-03	k: 7394	n:4120000
KS ci ratio: 1.239611e+00	ci left: 9.988774e-07	ci right 4.146793e-06	k: 9	n:4120000
SYNPO2L   4120000 perm   8321 sec   (495 perm/sec)   p_kst 2.184466e-06   p_cons 1.794660e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.931908e-07	k: 0	n:4130000
Cons ci ratio: 4.549129e-02	ci left: 1.753842e-03	ci right 1.835721e-03	k: 7411	n:4130000
KS ci ratio: 1.239611e+00	ci left: 9.964588e-07	ci right 4.136752e-06	k: 9	n:4130000
SYNPO2L   4130000 perm   8359 sec   (494 perm/sec)   p_kst 2.179177e-06   p_cons 1.794431e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.910333e-07	k: 0	n:4140000
Cons ci ratio: 4.543003e-02	ci left: 1.754382e-03	ci right 1.836173e-03	k: 7431	n:4140000
KS ci ratio: 1.239611e+00	ci left: 9.940519e-07	ci right 4.126760e-06	k: 9	n:4140000
SYNPO2L   4140000 perm   8397 sec   (493 perm/sec)   p_kst 2.173913e-06   p_cons 1.794928e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.888862e-07	k: 0	n:4150000
Cons ci ratio: 4.537511e-02	ci left: 1.754442e-03	ci right 1.836135e-03	k: 7449	n:4150000
KS ci ratio: 1.239611e+00	ci left: 9.916566e-07	ci right 4.116816e-06	k: 9	n:4150000
SYNPO2L   4150000 perm   8435 sec   (492 perm/sec)   p_kst 2.168675e-06   p_cons 1.794940e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.867495e-07	k: 0	n:4160000
Cons ci ratio: 4.533560e-02	ci left: 1.753315e-03	ci right 1.834881e-03	k: 7462	n:4160000
KS ci ratio: 1.239611e+00	ci left: 9.892728e-07	ci right 4.106920e-06	k: 9	n:4160000
SYNPO2L   4160000 perm   8474 sec   (491 perm/sec)   p_kst 2.163462e-06   p_cons 1.793750e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.846230e-07	k: 0	n:4170000
Cons ci ratio: 4.529923e-02	ci left: 1.751955e-03	ci right 1.833392e-03	k: 7474	n:4170000
KS ci ratio: 1.239611e+00	ci left: 9.869005e-07	ci right 4.097071e-06	k: 9	n:4170000
SYNPO2L   4170000 perm   8512 sec   (490 perm/sec)   p_kst 2.158273e-06   p_cons 1.792326e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.825067e-07	k: 0	n:4180000
Cons ci ratio: 4.525992e-02	ci left: 1.750839e-03	ci right 1.832151e-03	k: 7487	n:4180000
KS ci ratio: 1.239611e+00	ci left: 9.845395e-07	ci right 4.087270e-06	k: 9	n:4180000
SYNPO2L   4180000 perm   8551 sec   (489 perm/sec)   p_kst 2.153110e-06   p_cons 1.791148e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.804004e-07	k: 0	n:4190000
Cons ci ratio: 4.520863e-02	ci left: 1.750671e-03	ci right 1.831881e-03	k: 7504	n:4190000
KS ci ratio: 1.239611e+00	ci left: 9.821897e-07	ci right 4.077515e-06	k: 9	n:4190000
SYNPO2L   4190000 perm   8590 sec   (488 perm/sec)   p_kst 2.147971e-06   p_cons 1.790931e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.783042e-07	k: 0	n:4200000
Cons ci ratio: 4.515752e-02	ci left: 1.750505e-03	ci right 1.831613e-03	k: 7521	n:4200000
KS ci ratio: 1.239611e+00	ci left: 9.798512e-07	ci right 4.067806e-06	k: 9	n:4200000
SYNPO2L   4200000 perm   8628 sec   (487 perm/sec)   p_kst 2.142857e-06   p_cons 1.790714e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.762180e-07	k: 0	n:4210000
Cons ci ratio: 4.508861e-02	ci left: 1.751749e-03	ci right 1.832787e-03	k: 7544	n:4210000
KS ci ratio: 1.239611e+00	ci left: 9.775238e-07	ci right 4.058144e-06	k: 9	n:4210000
SYNPO2L   4210000 perm   8667 sec   (486 perm/sec)   p_kst 2.137767e-06   p_cons 1.791924e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.741417e-07	k: 0	n:4220000
Cons ci ratio: 4.501704e-02	ci left: 1.753221e-03	ci right 1.834195e-03	k: 7568	n:4220000
KS ci ratio: 1.239611e+00	ci left: 9.752073e-07	ci right 4.048528e-06	k: 9	n:4220000
SYNPO2L   4220000 perm   8706 sec   (485 perm/sec)   p_kst 2.132701e-06   p_cons 1.793365e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.720751e-07	k: 0	n:4230000
Cons ci ratio: 4.497252e-02	ci left: 1.752582e-03	ci right 1.833445e-03	k: 7583	n:4230000
KS ci ratio: 1.239611e+00	ci left: 9.729019e-07	ci right 4.038957e-06	k: 9	n:4230000
SYNPO2L   4230000 perm   8745 sec   (484 perm/sec)   p_kst 2.127660e-06   p_cons 1.792671e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.700184e-07	k: 0	n:4240000
Cons ci ratio: 4.491924e-02	ci left: 1.752646e-03	ci right 1.833414e-03	k: 7601	n:4240000
KS ci ratio: 1.239611e+00	ci left: 9.706073e-07	ci right 4.029431e-06	k: 9	n:4240000
SYNPO2L   4240000 perm   8785 sec   (483 perm/sec)   p_kst 2.122642e-06   p_cons 1.792689e-03   p_joint 0

Joint ci ratio: 3.919999e+00	ci left: 0	ci right 8.679713e-07	k: 0	n:4250000
Cons ci ratio: 4.486910e-02	ci left: 1.752478e-03	ci right 1.833145e-03	k: 7618	n:4250000
KS ci ratio: 1.239611e+00	ci left: 9.683235e-07	ci right 4.019950e-06	k: 9	n:4250000
SYNPO2L   4250000 perm   8825 sec   (482 perm/sec)   p_kst 2.117647e-06   p_cons 1.792471e-03   p_joint 0

Joint ci ratio: 1.481619e+00	ci left: 5.168768e-07	ci right 3.065602e-06	k: 6	n:4260000
Cons ci ratio: 4.481620e-02	ci left: 1.752542e-03	ci right 1.833114e-03	k: 7636	n:4260000
KS ci ratio: 1.181923e+00	ci left: 1.125679e-06	ci right 4.316981e-06	k: 10	n:4260000
SYNPO2L   4260000 perm   8865 sec   (481 perm/sec)   p_kst 2.347418e-06   p_cons 1.792488e-03   p_joint 1.408451e-06

Joint ci ratio: 1.481619e+00	ci left: 5.156663e-07	ci right 3.058422e-06	k: 6	n:4270000
Cons ci ratio: 4.476347e-02	ci left: 1.752606e-03	ci right 1.833084e-03	k: 7654	n:4270000
KS ci ratio: 1.181923e+00	ci left: 1.123042e-06	ci right 4.306871e-06	k: 10	n:4270000
SYNPO2L   4270000 perm   8904 sec   (480 perm/sec)   p_kst 2.341920e-06   p_cons 1.792506e-03   p_joint 1.405152e-06

Joint ci ratio: 1.481619e+00	ci left: 5.144614e-07	ci right 3.051276e-06	k: 6	n:4280000
Cons ci ratio: 4.470802e-02	ci left: 1.752900e-03	ci right 1.833290e-03	k: 7673	n:4280000
KS ci ratio: 1.181923e+00	ci left: 1.120418e-06	ci right 4.296808e-06	k: 10	n:4280000
SYNPO2L   4280000 perm   8943 sec   (479 perm/sec)   p_kst 2.336449e-06   p_cons 1.792757e-03   p_joint 1.401869e-06

Joint ci ratio: 1.481619e+00	ci left: 5.132622e-07	ci right 3.044164e-06	k: 6	n:4290000
Cons ci ratio: 4.464405e-02	ci left: 1.753885e-03	ci right 1.834202e-03	k: 7695	n:4290000
KS ci ratio: 1.181923e+00	ci left: 1.117807e-06	ci right 4.286792e-06	k: 10	n:4290000
SYNPO2L   4290000 perm   8983 sec   (478 perm/sec)   p_kst 2.331002e-06   p_cons 1.793706e-03   p_joint 1.398601e-06

Joint ci ratio: 1.481619e+00	ci left: 5.120686e-07	ci right 3.037084e-06	k: 6	n:4300000
Cons ci ratio: 4.460642e-02	ci left: 1.752796e-03	ci right 1.832994e-03	k: 7708	n:4300000
KS ci ratio: 1.181923e+00	ci left: 1.115207e-06	ci right 4.276823e-06	k: 10	n:4300000
SYNPO2L   4300000 perm   9023 sec   (477 perm/sec)   p_kst 2.325581e-06   p_cons 1.792558e-03   p_joint 1.395349e-06

Joint ci ratio: 1.481619e+00	ci left: 5.108805e-07	ci right 3.030038e-06	k: 6	n:4310000
Cons ci ratio: 4.454000e-02	ci left: 1.754006e-03	ci right 1.834137e-03	k: 7731	n:4310000
KS ci ratio: 1.181923e+00	ci left: 1.112620e-06	ci right 4.266900e-06	k: 10	n:4310000
SYNPO2L   4310000 perm   9063 sec   (476 perm/sec)   p_kst 2.320186e-06   p_cons 1.793735e-03   p_joint 1.392111e-06

Joint ci ratio: 1.481619e+00	ci left: 5.096979e-07	ci right 3.023024e-06	k: 6	n:4320000
Cons ci ratio: 4.449112e-02	ci left: 1.753837e-03	ci right 1.833870e-03	k: 7748	n:4320000
KS ci ratio: 1.181923e+00	ci left: 1.110044e-06	ci right 4.257023e-06	k: 10	n:4320000
SYNPO2L   4320000 perm   9103 sec   (475 perm/sec)   p_kst 2.314815e-06   p_cons 1.793519e-03   p_joint 1.388889e-06

Joint ci ratio: 1.481619e+00	ci left: 5.085208e-07	ci right 3.016042e-06	k: 6	n:4330000
Cons ci ratio: 4.444527e-02	ci left: 1.753441e-03	ci right 1.833371e-03	k: 7764	n:4330000
KS ci ratio: 1.181923e+00	ci left: 1.107481e-06	ci right 4.247191e-06	k: 10	n:4330000
SYNPO2L   4330000 perm   9143 sec   (474 perm/sec)   p_kst 2.309469e-06   p_cons 1.793072e-03   p_joint 1.385681e-06

Joint ci ratio: 1.481619e+00	ci left: 5.073491e-07	ci right 3.009093e-06	k: 6	n:4340000
Cons ci ratio: 4.438813e-02	ci left: 1.753958e-03	ci right 1.833806e-03	k: 7784	n:4340000
KS ci ratio: 1.181923e+00	ci left: 1.104929e-06	ci right 4.237405e-06	k: 10	n:4340000
SYNPO2L   4340000 perm   9183 sec   (473 perm/sec)   p_kst 2.304147e-06   p_cons 1.793548e-03   p_joint 1.382488e-06

Joint ci ratio: 1.481619e+00	ci left: 5.061828e-07	ci right 3.002175e-06	k: 6	n:4350000
Cons ci ratio: 4.431131e-02	ci left: 1.756064e-03	ci right 1.835866e-03	k: 7811	n:4350000
KS ci ratio: 1.181923e+00	ci left: 1.102389e-06	ci right 4.227664e-06	k: 10	n:4350000
SYNPO2L   4350000 perm   9223 sec   (472 perm/sec)   p_kst 2.298851e-06   p_cons 1.795632e-03   p_joint 1.379310e-06

Joint ci ratio: 1.481619e+00	ci left: 5.050218e-07	ci right 2.995290e-06	k: 6	n:4360000
Cons ci ratio: 4.426601e-02	ci left: 1.755665e-03	ci right 1.835366e-03	k: 7827	n:4360000
KS ci ratio: 1.181923e+00	ci left: 1.099860e-06	ci right 4.217968e-06	k: 10	n:4360000
SYNPO2L   4360000 perm   9264 sec   (471 perm/sec)   p_kst 2.293578e-06   p_cons 1.795183e-03   p_joint 1.376147e-06

Joint ci ratio: 1.481619e+00	ci left: 5.038661e-07	ci right 2.988436e-06	k: 6	n:4370000
Cons ci ratio: 4.420110e-02	ci left: 1.756853e-03	ci right 1.836487e-03	k: 7850	n:4370000
KS ci ratio: 1.181923e+00	ci left: 1.097343e-06	ci right 4.208315e-06	k: 10	n:4370000
SYNPO2L   4370000 perm   9304 sec   (470 perm/sec)   p_kst 2.288330e-06   p_cons 1.796339e-03   p_joint 1.372998e-06

Joint ci ratio: 1.481619e+00	ci left: 5.027157e-07	ci right 2.981613e-06	k: 6	n:4380000
Cons ci ratio: 4.415333e-02	ci left: 1.756680e-03	ci right 1.836218e-03	k: 7867	n:4380000
KS ci ratio: 1.181923e+00	ci left: 1.094838e-06	ci right 4.198707e-06	k: 10	n:4380000
SYNPO2L   4380000 perm   9345 sec   (469 perm/sec)   p_kst 2.283105e-06   p_cons 1.796119e-03   p_joint 1.369863e-06

Joint ci ratio: 1.481619e+00	ci left: 5.015706e-07	ci right 2.974821e-06	k: 6	n:4390000
Cons ci ratio: 4.410851e-02	ci left: 1.756283e-03	ci right 1.835720e-03	k: 7883	n:4390000
KS ci ratio: 1.181923e+00	ci left: 1.092344e-06	ci right 4.189143e-06	k: 10	n:4390000
SYNPO2L   4390000 perm   9386 sec   (468 perm/sec)   p_kst 2.277904e-06   p_cons 1.795672e-03   p_joint 1.366743e-06

Joint ci ratio: 1.481619e+00	ci left: 5.004307e-07	ci right 2.968060e-06	k: 6	n:4400000
Cons ci ratio: 4.405266e-02	ci left: 1.756787e-03	ci right 1.836144e-03	k: 7903	n:4400000
KS ci ratio: 1.181923e+00	ci left: 1.089862e-06	ci right 4.179622e-06	k: 10	n:4400000
SYNPO2L   4400000 perm   9427 sec   (467 perm/sec)   p_kst 2.272727e-06   p_cons 1.796136e-03   p_joint 1.363636e-06

Joint ci ratio: 1.481619e+00	ci left: 4.992959e-07	ci right 2.961330e-06	k: 6	n:4410000
Cons ci ratio: 4.399980e-02	ci left: 1.757064e-03	ci right 1.836336e-03	k: 7922	n:4410000
KS ci ratio: 1.181923e+00	ci left: 1.087390e-06	ci right 4.170145e-06	k: 10	n:4410000
SYNPO2L   4410000 perm   9467 sec   (466 perm/sec)   p_kst 2.267574e-06   p_cons 1.796372e-03   p_joint 1.360544e-06

Joint ci ratio: 1.481619e+00	ci left: 4.981663e-07	ci right 2.954630e-06	k: 6	n:4420000
Cons ci ratio: 4.395545e-02	ci left: 1.756669e-03	ci right 1.835841e-03	k: 7938	n:4420000
KS ci ratio: 1.181923e+00	ci left: 1.084930e-06	ci right 4.160710e-06	k: 10	n:4420000
SYNPO2L   4420000 perm   9507 sec   (465 perm/sec)   p_kst 2.262443e-06   p_cons 1.795928e-03   p_joint 1.357466e-06

Joint ci ratio: 1.481619e+00	ci left: 4.970417e-07	ci right 2.947960e-06	k: 6	n:4430000
Cons ci ratio: 4.389742e-02	ci left: 1.757392e-03	ci right 1.836490e-03	k: 7959	n:4430000
KS ci ratio: 1.181923e+00	ci left: 1.082481e-06	ci right 4.151318e-06	k: 10	n:4430000
SYNPO2L   4430000 perm   9548 sec   (464 perm/sec)   p_kst 2.257336e-06   p_cons 1.796614e-03   p_joint 1.354402e-06

Joint ci ratio: 1.481619e+00	ci left: 4.959223e-07	ci right 2.941321e-06	k: 6	n:4440000
Cons ci ratio: 4.383686e-02	ci left: 1.758334e-03	ci right 1.837363e-03	k: 7981	n:4440000
KS ci ratio: 1.181923e+00	ci left: 1.080043e-06	ci right 4.141968e-06	k: 10	n:4440000
SYNPO2L   4440000 perm   9590 sec   (463 perm/sec)   p_kst 2.252252e-06   p_cons 1.797523e-03   p_joint 1.351351e-06

Joint ci ratio: 1.481619e+00	ci left: 4.948079e-07	ci right 2.934711e-06	k: 6	n:4450000
Cons ci ratio: 4.378751e-02	ci left: 1.758384e-03	ci right 1.837323e-03	k: 7999	n:4450000
KS ci ratio: 1.181923e+00	ci left: 1.077616e-06	ci right 4.132660e-06	k: 10	n:4450000
SYNPO2L   4450000 perm   9631 sec   (462 perm/sec)   p_kst 2.247191e-06   p_cons 1.797528e-03   p_joint 1.348315e-06

Joint ci ratio: 1.481619e+00	ci left: 4.936984e-07	ci right 2.928131e-06	k: 6	n:4460000
Cons ci ratio: 4.373834e-02	ci left: 1.758433e-03	ci right 1.837283e-03	k: 8017	n:4460000
KS ci ratio: 1.181923e+00	ci left: 1.075200e-06	ci right 4.123394e-06	k: 10	n:4460000
SYNPO2L   4460000 perm   9672 sec   (461 perm/sec)   p_kst 2.242152e-06   p_cons 1.797534e-03   p_joint 1.345291e-06

Joint ci ratio: 1.481619e+00	ci left: 4.925939e-07	ci right 2.921580e-06	k: 6	n:4470000
Cons ci ratio: 4.368932e-02	ci left: 1.758482e-03	ci right 1.837244e-03	k: 8035	n:4470000
KS ci ratio: 1.181923e+00	ci left: 1.072794e-06	ci right 4.114170e-06	k: 10	n:4470000
SYNPO2L   4470000 perm   9713 sec   (460 perm/sec)   p_kst 2.237136e-06   p_cons 1.797539e-03   p_joint 1.342282e-06

Joint ci ratio: 1.481619e+00	ci left: 4.914944e-07	ci right 2.915059e-06	k: 6	n:4480000
Cons ci ratio: 4.364048e-02	ci left: 1.758531e-03	ci right 1.837205e-03	k: 8053	n:4480000
KS ci ratio: 1.181923e+00	ci left: 1.070400e-06	ci right 4.104986e-06	k: 10	n:4480000
SYNPO2L   4480000 perm   9754 sec   (459 perm/sec)   p_kst 2.232143e-06   p_cons 1.797545e-03   p_joint 1.339286e-06

Joint ci ratio: 1.481619e+00	ci left: 4.903998e-07	ci right 2.908567e-06	k: 6	n:4490000
Cons ci ratio: 4.358097e-02	ci left: 1.759461e-03	ci right 1.838066e-03	k: 8075	n:4490000
KS ci ratio: 1.181923e+00	ci left: 1.068016e-06	ci right 4.095844e-06	k: 10	n:4490000
SYNPO2L   4490000 perm   9795 sec   (458 perm/sec)   p_kst 2.227171e-06   p_cons 1.798441e-03   p_joint 1.336303e-06

Joint ci ratio: 1.481619e+00	ci left: 4.893100e-07	ci right 2.902103e-06	k: 6	n:4500000
Cons ci ratio: 4.355406e-02	ci left: 1.757749e-03	ci right 1.836228e-03	k: 8085	n:4500000
KS ci ratio: 1.181923e+00	ci left: 1.065642e-06	ci right 4.086742e-06	k: 10	n:4500000
SYNPO2L   4500000 perm   9837 sec   (457 perm/sec)   p_kst 2.222222e-06   p_cons 1.796667e-03   p_joint 1.333333e-06

Joint ci ratio: 1.481619e+00	ci left: 4.882250e-07	ci right 2.895668e-06	k: 6	n:4510000
Cons ci ratio: 4.350835e-02	ci left: 1.757580e-03	ci right 1.835967e-03	k: 8102	n:4510000
KS ci ratio: 1.181923e+00	ci left: 1.063280e-06	ci right 4.077680e-06	k: 10	n:4510000
SYNPO2L   4510000 perm   9878 sec   (457 perm/sec)   p_kst 2.217295e-06   p_cons 1.796452e-03   p_joint 1.330377e-06

Joint ci ratio: 1.481619e+00	ci left: 4.871449e-07	ci right 2.889262e-06	k: 6	n:4520000
Cons ci ratio: 4.345474e-02	ci left: 1.758068e-03	ci right 1.836378e-03	k: 8122	n:4520000
KS ci ratio: 1.181923e+00	ci left: 1.060927e-06	ci right 4.068659e-06	k: 10	n:4520000
SYNPO2L   4520000 perm   9920 sec   (456 perm/sec)   p_kst 2.212389e-06   p_cons 1.796903e-03   p_joint 1.327434e-06

Joint ci ratio: 1.481619e+00	ci left: 4.860695e-07	ci right 2.882884e-06	k: 6	n:4530000
Cons ci ratio: 4.340935e-02	ci left: 1.757899e-03	ci right 1.836118e-03	k: 8139	n:4530000
KS ci ratio: 1.181923e+00	ci left: 1.058585e-06	ci right 4.059677e-06	k: 10	n:4530000
SYNPO2L   4530000 perm   9962 sec   (455 perm/sec)   p_kst 2.207506e-06   p_cons 1.796689e-03   p_joint 1.324503e-06

Joint ci ratio: 1.481619e+00	ci left: 4.849989e-07	ci right 2.876534e-06	k: 6	n:4540000
Cons ci ratio: 4.335877e-02	ci left: 1.758166e-03	ci right 1.836304e-03	k: 8158	n:4540000
KS ci ratio: 1.181923e+00	ci left: 1.056254e-06	ci right 4.050735e-06	k: 10	n:4540000
SYNPO2L   4540000 perm   10004 sec   (454 perm/sec)   p_kst 2.202643e-06   p_cons 1.796916e-03   p_joint 1.321586e-06

Joint ci ratio: 1.481619e+00	ci left: 4.839330e-07	ci right 2.870212e-06	k: 6	n:4550000
Cons ci ratio: 4.330837e-02	ci left: 1.758433e-03	ci right 1.836489e-03	k: 8177	n:4550000
KS ci ratio: 1.181923e+00	ci left: 1.053932e-06	ci right 4.041833e-06	k: 10	n:4550000
SYNPO2L   4550000 perm   10046 sec   (453 perm/sec)   p_kst 2.197802e-06   p_cons 1.797143e-03   p_joint 1.318681e-06

Joint ci ratio: 1.481619e+00	ci left: 4.828717e-07	ci right 2.863918e-06	k: 6	n:4560000
Cons ci ratio: 4.326607e-02	ci left: 1.758048e-03	ci right 1.836008e-03	k: 8193	n:4560000
KS ci ratio: 1.181923e+00	ci left: 1.051621e-06	ci right 4.032969e-06	k: 10	n:4560000
SYNPO2L   4560000 perm   10088 sec   (452 perm/sec)   p_kst 2.192982e-06   p_cons 1.796711e-03   p_joint 1.315789e-06

Joint ci ratio: 1.481619e+00	ci left: 4.818151e-07	ci right 2.857651e-06	k: 6	n:4570000
Cons ci ratio: 4.323446e-02	ci left: 1.756798e-03	ci right 1.834645e-03	k: 8205	n:4570000
KS ci ratio: 1.181923e+00	ci left: 1.049320e-06	ci right 4.024144e-06	k: 10	n:4570000
SYNPO2L   4570000 perm   10130 sec   (451 perm/sec)   p_kst 2.188184e-06   p_cons 1.795405e-03   p_joint 1.312910e-06

Joint ci ratio: 1.481619e+00	ci left: 4.807631e-07	ci right 2.851411e-06	k: 6	n:4580000
Cons ci ratio: 4.319501e-02	ci left: 1.756202e-03	ci right 1.833950e-03	k: 8220	n:4580000
KS ci ratio: 1.181923e+00	ci left: 1.047029e-06	ci right 4.015358e-06	k: 10	n:4580000
SYNPO2L   4580000 perm   10172 sec   (450 perm/sec)   p_kst 2.183406e-06   p_cons 1.794760e-03   p_joint 1.310044e-06

Joint ci ratio: 1.481619e+00	ci left: 4.797157e-07	ci right 2.845199e-06	k: 6	n:4590000
Cons ci ratio: 4.314780e-02	ci left: 1.756255e-03	ci right 1.833918e-03	k: 8238	n:4590000
KS ci ratio: 1.181923e+00	ci left: 1.044747e-06	ci right 4.006610e-06	k: 10	n:4590000
SYNPO2L   4590000 perm   10215 sec   (449 perm/sec)   p_kst 2.178649e-06   p_cons 1.794771e-03   p_joint 1.307190e-06

Joint ci ratio: 1.481619e+00	ci left: 4.786728e-07	ci right 2.839014e-06	k: 6	n:4600000
Cons ci ratio: 4.309290e-02	ci left: 1.756953e-03	ci right 1.834546e-03	k: 8259	n:4600000
KS ci ratio: 1.181923e+00	ci left: 1.042476e-06	ci right 3.997900e-06	k: 10	n:4600000
SYNPO2L   4600000 perm   10257 sec   (448 perm/sec)   p_kst 2.173913e-06   p_cons 1.795435e-03   p_joint 1.304348e-06

Joint ci ratio: 1.481619e+00	ci left: 4.776345e-07	ci right 2.832856e-06	k: 6	n:4610000
Cons ci ratio: 4.304602e-02	ci left: 1.757004e-03	ci right 1.834513e-03	k: 8277	n:4610000
KS ci ratio: 1.181923e+00	ci left: 1.040215e-06	ci right 3.989228e-06	k: 10	n:4610000
SYNPO2L   4610000 perm   10299 sec   (448 perm/sec)   p_kst 2.169197e-06   p_cons 1.795445e-03   p_joint 1.301518e-06

Joint ci ratio: 1.481619e+00	ci left: 4.766006e-07	ci right 2.826724e-06	k: 6	n:4620000
Cons ci ratio: 4.299151e-02	ci left: 1.757698e-03	ci right 1.835136e-03	k: 8298	n:4620000
KS ci ratio: 1.181923e+00	ci left: 1.037963e-06	ci right 3.980593e-06	k: 10	n:4620000
SYNPO2L   4620000 perm   10342 sec   (447 perm/sec)   p_kst 2.164502e-06   p_cons 1.796104e-03   p_joint 1.298701e-06

Joint ci ratio: 1.481619e+00	ci left: 4.755713e-07	ci right 2.820619e-06	k: 6	n:4630000
Cons ci ratio: 4.294496e-02	ci left: 1.757748e-03	ci right 1.835102e-03	k: 8316	n:4630000
KS ci ratio: 1.181923e+00	ci left: 1.035722e-06	ci right 3.971996e-06	k: 10	n:4630000
SYNPO2L   4630000 perm   10384 sec   (446 perm/sec)   p_kst 2.159827e-06   p_cons 1.796112e-03   p_joint 1.295896e-06

Joint ci ratio: 1.481619e+00	ci left: 4.745463e-07	ci right 2.814540e-06	k: 6	n:4640000
Cons ci ratio: 4.289857e-02	ci left: 1.757797e-03	ci right 1.835068e-03	k: 8334	n:4640000
KS ci ratio: 1.181923e+00	ci left: 1.033489e-06	ci right 3.963435e-06	k: 10	n:4640000
SYNPO2L   4640000 perm   10426 sec   (445 perm/sec)   p_kst 2.155172e-06   p_cons 1.796121e-03   p_joint 1.293103e-06

Joint ci ratio: 1.481619e+00	ci left: 4.735258e-07	ci right 2.808487e-06	k: 6	n:4650000
Cons ci ratio: 4.283948e-02	ci left: 1.758910e-03	ci right 1.836121e-03	k: 8357	n:4650000
KS ci ratio: 1.181923e+00	ci left: 1.031267e-06	ci right 3.954912e-06	k: 10	n:4650000
SYNPO2L   4650000 perm   10469 sec   (444 perm/sec)   p_kst 2.150538e-06   p_cons 1.797204e-03   p_joint 1.290323e-06

Joint ci ratio: 1.481619e+00	ci left: 4.725096e-07	ci right 2.802460e-06	k: 6	n:4660000
Cons ci ratio: 4.279598e-02	ci left: 1.758745e-03	ci right 1.835868e-03	k: 8374	n:4660000
KS ci ratio: 1.181923e+00	ci left: 1.029054e-06	ci right 3.946425e-06	k: 10	n:4660000
SYNPO2L   4660000 perm   10512 sec   (443 perm/sec)   p_kst 2.145923e-06   p_cons 1.796996e-03   p_joint 1.287554e-06

Joint ci ratio: 1.481619e+00	ci left: 4.714978e-07	ci right 2.796459e-06	k: 6	n:4670000
Cons ci ratio: 4.273222e-02	ci left: 1.760275e-03	ci right 1.837347e-03	k: 8399	n:4670000
KS ci ratio: 1.181923e+00	ci left: 1.026850e-06	ci right 3.937974e-06	k: 10	n:4670000
SYNPO2L   4670000 perm   10555 sec   (442 perm/sec)   p_kst 2.141328e-06   p_cons 1.798501e-03   p_joint 1.284797e-06

Joint ci ratio: 1.481619e+00	ci left: 4.704904e-07	ci right 2.790484e-06	k: 6	n:4680000
Cons ci ratio: 4.268905e-02	ci left: 1.760107e-03	ci right 1.837093e-03	k: 8416	n:4680000
KS ci ratio: 1.181923e+00	ci left: 1.024656e-06	ci right 3.929560e-06	k: 10	n:4680000
SYNPO2L   4680000 perm   10598 sec   (442 perm/sec)   p_kst 2.136752e-06   p_cons 1.798291e-03   p_joint 1.282051e-06

Joint ci ratio: 1.481619e+00	ci left: 4.694872e-07	ci right 2.784534e-06	k: 6	n:4690000
Cons ci ratio: 4.263588e-02	ci left: 1.760784e-03	ci right 1.837701e-03	k: 8437	n:4690000
KS ci ratio: 1.131605e+00	ci left: 1.170824e-06	ci right 4.196593e-06	k: 11	n:4690000
SYNPO2L   4690000 perm   10641 sec   (441 perm/sec)   p_kst 2.345416e-06   p_cons 1.798934e-03   p_joint 1.279318e-06

Joint ci ratio: 1.481619e+00	ci left: 4.684883e-07	ci right 2.778609e-06	k: 6	n:4700000
Cons ci ratio: 4.257283e-02	ci left: 1.762300e-03	ci right 1.839167e-03	k: 8462	n:4700000
KS ci ratio: 1.131605e+00	ci left: 1.168333e-06	ci right 4.187664e-06	k: 11	n:4700000
SYNPO2L   4700000 perm   10685 sec   (440 perm/sec)   p_kst 2.340426e-06   p_cons 1.800426e-03   p_joint 1.276596e-06

Joint ci ratio: 1.481619e+00	ci left: 4.674936e-07	ci right 2.772710e-06	k: 6	n:4710000
Cons ci ratio: 4.253516e-02	ci left: 1.761709e-03	ci right 1.838481e-03	k: 8477	n:4710000
KS ci ratio: 1.131605e+00	ci left: 1.165852e-06	ci right 4.178773e-06	k: 11	n:4710000
SYNPO2L   4710000 perm   10728 sec   (439 perm/sec)   p_kst 2.335456e-06   p_cons 1.799788e-03   p_joint 1.273885e-06

Joint ci ratio: 1.481619e+00	ci left: 4.665032e-07	ci right 2.766836e-06	k: 6	n:4720000
Cons ci ratio: 4.247506e-02	ci left: 1.763008e-03	ci right 1.839724e-03	k: 8501	n:4720000
KS ci ratio: 1.131605e+00	ci left: 1.163382e-06	ci right 4.169920e-06	k: 11	n:4720000
SYNPO2L   4720000 perm   10771 sec   (438 perm/sec)   p_kst 2.330508e-06   p_cons 1.801059e-03   p_joint 1.271186e-06

Joint ci ratio: 1.481619e+00	ci left: 4.655169e-07	ci right 2.760986e-06	k: 6	n:4730000
Cons ci ratio: 4.241770e-02	ci left: 1.764091e-03	ci right 1.840749e-03	k: 8524	n:4730000
KS ci ratio: 1.131605e+00	ci left: 1.160922e-06	ci right 4.161104e-06	k: 11	n:4730000
SYNPO2L   4730000 perm   10814 sec   (437 perm/sec)   p_kst 2.325581e-06   p_cons 1.802114e-03   p_joint 1.268499e-06

Joint ci ratio: 1.481619e+00	ci left: 4.645348e-07	ci right 2.755161e-06	k: 6	n:4740000
Cons ci ratio: 4.237050e-02	ci left: 1.764336e-03	ci right 1.840916e-03	k: 8543	n:4740000
KS ci ratio: 1.131605e+00	ci left: 1.158473e-06	ci right 4.152325e-06	k: 11	n:4740000
SYNPO2L   4740000 perm   10858 sec   (437 perm/sec)   p_kst 2.320675e-06   p_cons 1.802321e-03   p_joint 1.265823e-06

Joint ci ratio: 1.481619e+00	ci left: 4.635568e-07	ci right 2.749361e-06	k: 6	n:4750000
Cons ci ratio: 4.233337e-02	ci left: 1.763746e-03	ci right 1.840232e-03	k: 8558	n:4750000
KS ci ratio: 1.131605e+00	ci left: 1.156034e-06	ci right 4.143583e-06	k: 11	n:4750000
SYNPO2L   4750000 perm   10902 sec   (436 perm/sec)   p_kst 2.315789e-06   p_cons 1.801684e-03   p_joint 1.263158e-06

Joint ci ratio: 1.481619e+00	ci left: 4.625830e-07	ci right 2.743585e-06	k: 6	n:4760000
Cons ci ratio: 4.228893e-02	ci left: 1.763782e-03	ci right 1.840188e-03	k: 8576	n:4760000
KS ci ratio: 1.131605e+00	ci left: 1.153606e-06	ci right 4.134878e-06	k: 11	n:4760000
SYNPO2L   4760000 perm   10946 sec   (435 perm/sec)   p_kst 2.310924e-06   p_cons 1.801681e-03   p_joint 1.260504e-06

Joint ci ratio: 1.481619e+00	ci left: 4.616132e-07	ci right 2.737833e-06	k: 6	n:4770000
Cons ci ratio: 4.222003e-02	ci left: 1.765892e-03	ci right 1.842262e-03	k: 8604	n:4770000
KS ci ratio: 1.131605e+00	ci left: 1.151187e-06	ci right 4.126210e-06	k: 11	n:4770000
SYNPO2L   4770000 perm   10989 sec   (434 perm/sec)   p_kst 2.306080e-06   p_cons 1.803774e-03   p_joint 1.257862e-06

Joint ci ratio: 1.481619e+00	ci left: 4.606475e-07	ci right 2.732106e-06	k: 6	n:4780000
Cons ci ratio: 4.218574e-02	ci left: 1.765096e-03	ci right 1.841367e-03	k: 8618	n:4780000
KS ci ratio: 1.131605e+00	ci left: 1.148779e-06	ci right 4.117578e-06	k: 11	n:4780000
SYNPO2L   4780000 perm   11033 sec   (433 perm/sec)   p_kst 2.301255e-06   p_cons 1.802929e-03   p_joint 1.255230e-06

Joint ci ratio: 1.481619e+00	ci left: 4.596858e-07	ci right 2.726402e-06	k: 6	n:4790000
Cons ci ratio: 4.215154e-02	ci left: 1.764303e-03	ci right 1.840477e-03	k: 8632	n:4790000
KS ci ratio: 1.131605e+00	ci left: 1.146381e-06	ci right 4.108981e-06	k: 11	n:4790000
SYNPO2L   4790000 perm   11077 sec   (432 perm/sec)   p_kst 2.296451e-06   p_cons 1.802088e-03   p_joint 1.252610e-06

Joint ci ratio: 1.481619e+00	ci left: 4.587281e-07	ci right 2.720722e-06	k: 6	n:4800000
Cons ci ratio: 4.210766e-02	ci left: 1.764338e-03	ci right 1.840432e-03	k: 8650	n:4800000
KS ci ratio: 1.087211e+00	ci left: 1.291787e-06	ci right 4.366993e-06	k: 12	n:4800000
SYNPO2L   4800000 perm   11122 sec   (432 perm/sec)   p_kst 2.500000e-06   p_cons 1.802083e-03   p_joint 1.250000e-06

Joint ci ratio: 1.481620e+00	ci left: 4.577744e-07	ci right 2.715065e-06	k: 6	n:4810000
Cons ci ratio: 4.206879e-02	ci left: 1.763961e-03	ci right 1.839967e-03	k: 8666	n:4810000
KS ci ratio: 1.087211e+00	ci left: 1.289101e-06	ci right 4.357914e-06	k: 12	n:4810000
SYNPO2L   4810000 perm   11166 sec   (431 perm/sec)   p_kst 2.494802e-06   p_cons 1.801663e-03   p_joint 1.247401e-06

Joint ci ratio: 1.481620e+00	ci left: 4.568247e-07	ci right 2.709432e-06	k: 6	n:4820000
Cons ci ratio: 4.203487e-02	ci left: 1.763175e-03	ci right 1.839085e-03	k: 8680	n:4820000
KS ci ratio: 1.087211e+00	ci left: 1.286427e-06	ci right 4.348873e-06	k: 12	n:4820000
SYNPO2L   4820000 perm   11210 sec   (430 perm/sec)   p_kst 2.489627e-06   p_cons 1.800830e-03   p_joint 1.244813e-06

Joint ci ratio: 1.481620e+00	ci left: 4.558789e-07	ci right 2.703823e-06	k: 6	n:4830000
Cons ci ratio: 4.198169e-02	ci left: 1.764032e-03	ci right 1.839880e-03	k: 8702	n:4830000
KS ci ratio: 1.087211e+00	ci left: 1.283764e-06	ci right 4.339869e-06	k: 12	n:4830000
SYNPO2L   4830000 perm   11255 sec   (429 perm/sec)   p_kst 2.484472e-06   p_cons 1.801656e-03   p_joint 1.242236e-06

Joint ci ratio: 1.481620e+00	ci left: 4.549370e-07	ci right 2.698236e-06	k: 6	n:4840000
Cons ci ratio: 4.193112e-02	ci left: 1.764681e-03	ci right 1.840463e-03	k: 8723	n:4840000
KS ci ratio: 1.087211e+00	ci left: 1.281111e-06	ci right 4.330902e-06	k: 12	n:4840000
SYNPO2L   4840000 perm   11299 sec   (428 perm/sec)   p_kst 2.479339e-06   p_cons 1.802273e-03   p_joint 1.239669e-06

Joint ci ratio: 1.385928e+00	ci left: 5.802812e-07	ci right 2.973745e-06	k: 7	n:4850000
Cons ci ratio: 4.188073e-02	ci left: 1.765327e-03	ci right 1.841043e-03	k: 8744	n:4850000
KS ci ratio: 1.087211e+00	ci left: 1.278470e-06	ci right 4.321972e-06	k: 12	n:4850000
SYNPO2L   4850000 perm   11344 sec   (428 perm/sec)   p_kst 2.474227e-06   p_cons 1.802887e-03   p_joint 1.443299e-06

Joint ci ratio: 1.385928e+00	ci left: 5.790872e-07	ci right 2.967626e-06	k: 7	n:4860000
Cons ci ratio: 4.184487e-02	ci left: 1.764748e-03	ci right 1.840374e-03	k: 8759	n:4860000
KS ci ratio: 1.087211e+00	ci left: 1.275839e-06	ci right 4.313079e-06	k: 12	n:4860000
SYNPO2L   4860000 perm   11390 sec   (427 perm/sec)   p_kst 2.469136e-06   p_cons 1.802263e-03   p_joint 1.440329e-06

Joint ci ratio: 1.385928e+00	ci left: 5.778981e-07	ci right 2.961533e-06	k: 7	n:4870000
Cons ci ratio: 4.180433e-02	ci left: 1.764579e-03	ci right 1.840122e-03	k: 8776	n:4870000
KS ci ratio: 1.047662e+00	ci left: 1.421346e-06	ci right 4.564759e-06	k: 13	n:4870000
SYNPO2L   4870000 perm   11434 sec   (426 perm/sec)   p_kst 2.669405e-06   p_cons 1.802053e-03   p_joint 1.437372e-06

Joint ci ratio: 1.385928e+00	ci left: 5.767139e-07	ci right 2.955464e-06	k: 7	n:4880000
Cons ci ratio: 4.177105e-02	ci left: 1.763802e-03	ci right 1.839250e-03	k: 8790	n:4880000
KS ci ratio: 1.047662e+00	ci left: 1.418434e-06	ci right 4.555405e-06	k: 13	n:4880000
SYNPO2L   4880000 perm   11479 sec   (425 perm/sec)   p_kst 2.663934e-06   p_cons 1.801230e-03   p_joint 1.434426e-06

Joint ci ratio: 1.385928e+00	ci left: 5.755346e-07	ci right 2.949420e-06	k: 7	n:4890000
Cons ci ratio: 4.172598e-02	ci left: 1.764040e-03	ci right 1.839415e-03	k: 8809	n:4890000
KS ci ratio: 1.047662e+00	ci left: 1.415533e-06	ci right 4.546089e-06	k: 13	n:4890000
SYNPO2L   4890000 perm   11524 sec   (424 perm/sec)   p_kst 2.658487e-06   p_cons 1.801431e-03   p_joint 1.431493e-06

Joint ci ratio: 1.385928e+00	ci left: 5.743600e-07	ci right 2.943401e-06	k: 7	n:4900000
Cons ci ratio: 4.168815e-02	ci left: 1.763671e-03	ci right 1.838961e-03	k: 8825	n:4900000
KS ci ratio: 1.047662e+00	ci left: 1.412644e-06	ci right 4.536811e-06	k: 13	n:4900000
SYNPO2L   4900000 perm   11569 sec   (424 perm/sec)   p_kst 2.653061e-06   p_cons 1.801020e-03   p_joint 1.428571e-06

Joint ci ratio: 1.385928e+00	ci left: 5.731902e-07	ci right 2.937406e-06	k: 7	n:4910000
Cons ci ratio: 4.166222e-02	ci left: 1.762296e-03	ci right 1.837479e-03	k: 8836	n:4910000
KS ci ratio: 1.047662e+00	ci left: 1.409767e-06	ci right 4.527571e-06	k: 13	n:4910000
SYNPO2L   4910000 perm   11614 sec   (423 perm/sec)   p_kst 2.647658e-06   p_cons 1.799593e-03   p_joint 1.425662e-06

Joint ci ratio: 1.385928e+00	ci left: 5.720252e-07	ci right 2.931436e-06	k: 7	n:4920000
Cons ci ratio: 4.161986e-02	ci left: 1.762334e-03	ci right 1.837441e-03	k: 8854	n:4920000
KS ci ratio: 1.047662e+00	ci left: 1.406902e-06	ci right 4.518369e-06	k: 13	n:4920000
SYNPO2L   4920000 perm   11660 sec   (422 perm/sec)   p_kst 2.642276e-06   p_cons 1.799593e-03   p_joint 1.422764e-06

Joint ci ratio: 1.385928e+00	ci left: 5.708649e-07	ci right 2.925490e-06	k: 7	n:4930000
Cons ci ratio: 4.155885e-02	ci left: 1.763979e-03	ci right 1.839042e-03	k: 8880	n:4930000
KS ci ratio: 1.047662e+00	ci left: 1.404048e-06	ci right 4.509204e-06	k: 13	n:4930000
SYNPO2L   4930000 perm   11706 sec   (421 perm/sec)   p_kst 2.636917e-06   p_cons 1.801217e-03   p_joint 1.419878e-06

Joint ci ratio: 1.385928e+00	ci left: 5.697093e-07	ci right 2.919568e-06	k: 7	n:4940000
Cons ci ratio: 4.150746e-02	ci left: 1.764815e-03	ci right 1.839819e-03	k: 8902	n:4940000
KS ci ratio: 1.047662e+00	ci left: 1.401206e-06	ci right 4.500076e-06	k: 13	n:4940000
SYNPO2L   4940000 perm   11751 sec   (420 perm/sec)   p_kst 2.631579e-06   p_cons 1.802024e-03   p_joint 1.417004e-06

Joint ci ratio: 1.385928e+00	ci left: 5.685584e-07	ci right 2.913670e-06	k: 7	n:4950000
Cons ci ratio: 4.146789e-02	ci left: 1.764649e-03	ci right 1.839572e-03	k: 8919	n:4950000
KS ci ratio: 1.047662e+00	ci left: 1.398375e-06	ci right 4.490985e-06	k: 13	n:4950000
SYNPO2L   4950000 perm   11796 sec   (420 perm/sec)   p_kst 2.626263e-06   p_cons 1.801818e-03   p_joint 1.414141e-06

Joint ci ratio: 1.385928e+00	ci left: 5.674121e-07	ci right 2.907795e-06	k: 7	n:4960000
Cons ci ratio: 4.142611e-02	ci left: 1.764682e-03	ci right 1.839530e-03	k: 8937	n:4960000
KS ci ratio: 1.047662e+00	ci left: 1.395556e-06	ci right 4.481930e-06	k: 13	n:4960000
SYNPO2L   4960000 perm   11841 sec   (419 perm/sec)   p_kst 2.620968e-06   p_cons 1.801815e-03   p_joint 1.411290e-06

Joint ci ratio: 1.385928e+00	ci left: 5.662704e-07	ci right 2.901945e-06	k: 7	n:4970000
Cons ci ratio: 4.138446e-02	ci left: 1.764716e-03	ci right 1.839488e-03	k: 8955	n:4970000
KS ci ratio: 1.047662e+00	ci left: 1.392748e-06	ci right 4.472913e-06	k: 13	n:4970000
SYNPO2L   4970000 perm   11886 sec   (418 perm/sec)   p_kst 2.615694e-06   p_cons 1.801811e-03   p_joint 1.408451e-06

Joint ci ratio: 1.385928e+00	ci left: 5.651333e-07	ci right 2.896117e-06	k: 7	n:4980000
Cons ci ratio: 4.134294e-02	ci left: 1.764749e-03	ci right 1.839446e-03	k: 8973	n:4980000
KS ci ratio: 1.047662e+00	ci left: 1.389951e-06	ci right 4.463931e-06	k: 13	n:4980000
SYNPO2L   4980000 perm   11932 sec   (417 perm/sec)   p_kst 2.610442e-06   p_cons 1.801807e-03   p_joint 1.405622e-06

Joint ci ratio: 1.385928e+00	ci left: 5.640008e-07	ci right 2.890314e-06	k: 7	n:4990000
Cons ci ratio: 4.129234e-02	ci left: 1.765576e-03	ci right 1.840214e-03	k: 8995	n:4990000
KS ci ratio: 1.047662e+00	ci left: 1.387166e-06	ci right 4.454985e-06	k: 13	n:4990000
SYNPO2L   4990000 perm   11977 sec   (417 perm/sec)   p_kst 2.605210e-06   p_cons 1.802605e-03   p_joint 1.402806e-06

Joint ci ratio: 1.385928e+00	ci left: 5.628728e-07	ci right 2.884533e-06	k: 7	n:5000000
Cons ci ratio: 4.124421e-02	ci left: 1.766202e-03	ci right 1.840777e-03	k: 9016	n:5000000
KS ci ratio: 1.047662e+00	ci left: 1.384391e-06	ci right 4.446075e-06	k: 13	n:5000000
SYNPO2L   5000000 perm   12022 sec   (416 perm/sec)   p_kst 2.600000e-06   p_cons 1.803200e-03   p_joint 1.400000e-06

Outputting figure to mutsig2_images.part000000000170/SYNPO2L.3_3054_5000000_2.6e-06_0.0018032_1.4e-06.png
                gene_name: SYNPO2L
               theta_stop: 1.4 
                    nperm: 5000000 
                     p_ks: 2.60e-06 
        ci_ks_bounds_left: 1.38e-06 
       ci_ks_bounds_right: 4.45e-06 
                   p_cons: 0.0018 
      ci_cons_bounds_left: 0.0018 
     ci_cons_bounds_right: 0.0018 
                  p_joint: 1.40e-06 
     ci_joint_bounds_left: 5.63e-07 
    ci_joint_bounds_right: 2.88e-06 

Current progress: 43 percent done.
TACC2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.148685e-02	ci left: 4.617755e-01	ci right 4.814411e-01	k: 4716	n:10000
Cons ci ratio: 1.440314e-02	ci left: 8.745949e-01	ci right 8.873822e-01	k: 8811	n:10000
KS ci ratio: 5.513094e-02	ci left: 3.264433e-01	ci right 3.450525e-01	k: 3357	n:10000
TACC2   10000 perm   3 sec   (3100 perm/sec)   p_kst 3.357000e-01   p_cons 8.811000e-01   p_joint 4.716000e-01

Outputting figure to mutsig2_images.part000000000170/TACC2.3_9007_10000_0.3357_0.8811_0.4716.png
                gene_name: TACC2
               theta_stop: 0.055 
                    nperm: 10000 
                     p_ks: 0.34 
        ci_ks_bounds_left: 0.33 
       ci_ks_bounds_right: 0.35 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.47 
     ci_joint_bounds_left: 0.46 
    ci_joint_bounds_right: 0.48 

Current progress: 57 percent done.
SYNPO2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.105409e-01	ci left: 1.054923e-01	ci right 1.179349e-01	k: 1116	n:10000
Cons ci ratio: 8.649139e-02	ci left: 1.629794e-01	ci right 1.778132e-01	k: 1703	n:10000
KS ci ratio: 2.236599e-01	ci left: 2.646035e-02	ci right 3.321723e-02	k: 297	n:10000
SYNPO2   10000 perm   2 sec   (5069 perm/sec)   p_kst 2.970000e-02   p_cons 1.703000e-01   p_joint 1.116000e-01

Joint ci ratio: 7.139006e-02	ci left: 1.263036e-01	ci right 1.357040e-01	k: 2619	n:20000
Cons ci ratio: 6.065605e-02	ci left: 1.674843e-01	ci right 1.780110e-01	k: 3454	n:20000
KS ci ratio: 1.560097e-01	ci left: 2.820837e-02	ci right 3.302937e-02	k: 611	n:20000
SYNPO2   20000 perm   4 sec   (4548 perm/sec)   p_kst 3.055000e-02   p_cons 1.727000e-01   p_joint 1.309500e-01

Joint ci ratio: 7.148559e-02	ci left: 8.783409e-02	ci right 9.437868e-02	k: 2732	n:30000
Cons ci ratio: 4.973756e-02	ci left: 1.672498e-01	ci right 1.758139e-01	k: 5145	n:30000
KS ci ratio: 1.283959e-01	ci left: 2.819549e-02	ci right 3.209621e-02	k: 903	n:30000
SYNPO2   30000 perm   7 sec   (4342 perm/sec)   p_kst 3.010000e-02   p_cons 1.715000e-01   p_joint 9.106667e-02

Joint ci ratio: 5.467457e-02	ci left: 1.107529e-01	ci right 1.170033e-01	k: 4554	n:40000
Cons ci ratio: 4.317794e-02	ci left: 1.671483e-01	ci right 1.745496e-01	k: 6833	n:40000
KS ci ratio: 1.105500e-01	ci left: 2.878783e-02	ci right 3.218078e-02	k: 1218	n:40000
SYNPO2   40000 perm   10 sec   (4165 perm/sec)   p_kst 3.045000e-02   p_cons 1.708250e-01   p_joint 1.138500e-01

Joint ci ratio: 4.950676e-02	ci left: 1.086548e-01	ci right 1.141904e-01	k: 5570	n:50000
Cons ci ratio: 3.858826e-02	ci left: 1.677685e-01	ci right 1.743897e-01	k: 8553	n:50000
KS ci ratio: 9.893775e-02	ci left: 2.893197e-02	ci right 3.196287e-02	k: 1521	n:50000
SYNPO2   50000 perm   12 sec   (4070 perm/sec)   p_kst 3.042000e-02   p_cons 1.710600e-01   p_joint 1.114000e-01

Outputting figure to mutsig2_images.part000000000170/SYNPO2.2_3918_50000_0.03042_0.17106_0.1114.png
                gene_name: SYNPO2
               theta_stop: 0.099 
                    nperm: 50000 
                     p_ks: 0.030 
        ci_ks_bounds_left: 0.029 
       ci_ks_bounds_right: 0.032 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.17 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.11 
     ci_joint_bounds_left: 0.11 
    ci_joint_bounds_right: 0.11 

Current progress: 71 percent done.
SYTL3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.951678e-02	ci left: 4.860529e-01	ci right 5.057495e-01	k: 4959	n:10000
Cons ci ratio: 6.290595e-02	ci left: 2.708188e-01	ci right 2.885097e-01	k: 2796	n:10000
KS ci ratio: 5.308208e-02	ci left: 3.434285e-01	ci right 3.622573e-01	k: 3528	n:10000
SYTL3   10000 perm   2 sec   (6349 perm/sec)   p_kst 3.528000e-01   p_cons 2.796000e-01   p_joint 4.959000e-01

Outputting figure to mutsig2_images.part000000000170/SYTL3.2_1681_10000_0.3528_0.2796_0.4959.png
                gene_name: SYTL3
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.35 
        ci_ks_bounds_left: 0.34 
       ci_ks_bounds_right: 0.36 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.50 
     ci_joint_bounds_left: 0.49 
    ci_joint_bounds_right: 0.51 

Current progress: 86 percent done.
SYTL4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.158142e-02	ci left: 7.589922e-01	ci right 7.756518e-01	k: 7674	n:10000
Cons ci ratio: 4.372585e-02	ci left: 4.357256e-01	ci right 4.553061e-01	k: 4455	n:10000
KS ci ratio: 4.224355e-02	ci left: 4.527897e-01	ci right 4.724321e-01	k: 4626	n:10000
SYTL4   10000 perm   2 sec   (6008 perm/sec)   p_kst 4.626000e-01   p_cons 4.455000e-01   p_joint 7.674000e-01

Outputting figure to mutsig2_images.part000000000170/SYTL4.2_2080_10000_0.4626_0.4455_0.7674.png
                gene_name: SYTL4
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.77 
     ci_joint_bounds_left: 0.76 
    ci_joint_bounds_right: 0.78 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000170
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 170 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1714>
Subject: Job 8704382: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1714>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000171> was used as the working directory.
Started at Thu Nov 15 19:37:04 2012
Results reported at Thu Nov 15 19:39:20 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000171.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000171.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 171  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000171.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    154.08 sec.
    Max Memory :      5620 MB
    Max Swap   :      8386 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
171
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 171
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 171: processing genes 15380 - 15470
Calculating significance of each gene.
Using projection method.
15380	TAF1B	7.504538e-02
15381	TAF1C	1
15382	TAF1D	1
15383	TAF1L	3.604327e-01
15384	TAF2	1
15385	TAF3	1
15386	TAF4	1
15387	TAF4B	1
15388	TAF5	1
15389	TAF5L	1
15390	TAF6	1
15391	TAF6L	1
15392	TAF7	1
15393	TAF7L	1
15394	TAF8	1
15395	TAF9	1
15396	TAF9B	1
15397	TAGAP	1
15398	TAGLN	1
15399	TAGLN2	1
15400	TAGLN3	1
15401	TAL1	1
15402	TAL2	1
15403	TALDO1	1
15404	TANC1	1.046131e-01
15405	TANC2	1
15406	TANK	1
15407	TAOK1	1
15408	TAOK2	1
15409	TAOK3	1
15410	TAP1	1
15411	TAP2	1
15412	TAPBP	1
15413	TAPBPL	1
15414	TAPT1	1
15415	TARBP1	3.585098e-01
15416	TARBP2	1
15417	TARDBP	1
15418	TARP	1
15419	TARS	1
15420	TARS2	1
15421	TARSL2	1
15422	TAS1R1	1
15423	TAS1R2	2.078560e-01
15424	TAS1R3	2.299044e-01
15425	TAS2R1	1
15426	TAS2R10	1
15427	TAS2R13	1
15428	TAS2R14	1
15429	TAS2R16	1
15430	TAS2R19	1
15431	TAS2R20	1
15432	TAS2R3	1
15433	TAS2R30	1
15434	TAS2R31	1
15435	TAS2R38	1
15436	TAS2R39	1
15437	TAS2R4	1
15438	TAS2R40	1
15439	TAS2R41	1
15440	TAS2R42	1
15441	TAS2R43	1
15442	TAS2R46	6.503320e-02
15443	TAS2R5	1
15444	TAS2R50	1
15445	TAS2R60	1
15446	TAS2R7	1.873384e-02
15447	TAS2R8	1
15448	TAS2R9	1
15449	TASP1	1
15450	TAT	9.092090e-02
15451	TATDN1	1
15452	TATDN2	1
15453	TATDN3	1
15454	TAX1BP1	2.819577e-01
15455	TAX1BP3	1
15456	TAZ	1
15457	TBC1D1	4.616864e-01
15458	TBC1D10A	1
15459	TBC1D10B	1
15460	TBC1D10C	1
15461	TBC1D12	3.033261e-02
15462	TBC1D13	1
15463	TBC1D14	2.428682e-01
15464	TBC1D15	1
15465	TBC1D16	1
15466	TBC1D17	1
15467	TBC1D19	1
15468	TBC1D2	5.294358e-02
15469	TBC1D20	1
15470	TBC1D21	1
Done

Running MutSig 2:
Scatter job 171: processing genes 15380 - 15470
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TANC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.094976e-02	ci left: 4.682672e-01	ci right 4.879456e-01	k: 4781	n:10000
Cons ci ratio: 6.257972e-02	ci left: 2.728981e-01	ci right 2.906292e-01	k: 2817	n:10000
KS ci ratio: 4.172899e-02	ci left: 4.588797e-01	ci right 4.785385e-01	k: 4687	n:10000
TANC1   10000 perm   2 sec   (4172 perm/sec)   p_kst 4.687000e-01   p_cons 2.817000e-01   p_joint 4.781000e-01

Outputting figure to mutsig2_images.part000000000171/TANC1.2_5691_10000_0.4687_0.2817_0.4781.png
                gene_name: TANC1
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.47 
        ci_ks_bounds_left: 0.46 
       ci_ks_bounds_right: 0.48 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.48 
     ci_joint_bounds_left: 0.47 
    ci_joint_bounds_right: 0.49 

Current progress: 50 percent done.
TBC1D2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.970424e-02	ci left: 6.256770e-01	ci right 6.446442e-01	k: 6352	n:10000
Cons ci ratio: 3.777008e-02	ci left: 5.086527e-01	ci right 5.283365e-01	k: 5185	n:10000
KS ci ratio: 6.528325e-03	ci left: 9.697378e-01	ci right 9.761827e-01	k: 9731	n:10000
TBC1D2   10000 perm   2 sec   (5751 perm/sec)   p_kst 9.731000e-01   p_cons 5.185000e-01   p_joint 6.352000e-01

Outputting figure to mutsig2_images.part000000000171/TBC1D2.2_2806_10000_0.9731_0.5185_0.6352.png
                gene_name: TBC1D2
               theta_stop: 0.038 
                    nperm: 10000 
                     p_ks: 0.97 
        ci_ks_bounds_left: 0.97 
       ci_ks_bounds_right: 0.98 
                   p_cons: 0.52 
      ci_cons_bounds_left: 0.51 
     ci_cons_bounds_right: 0.53 
                  p_joint: 0.64 
     ci_joint_bounds_left: 0.63 
    ci_joint_bounds_right: 0.64 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000171
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 171 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1654>
Subject: Job 8704383: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1654>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000172> was used as the working directory.
Started at Thu Nov 15 19:37:04 2012
Results reported at Thu Nov 15 19:39:57 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000172.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000172.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 172  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000172.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    198.72 sec.
    Max Memory :      5903 MB
    Max Swap   :      8414 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
172
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 172
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 172: processing genes 15471 - 15560
Calculating significance of each gene.
Using projection method.
15471	TBC1D22A	1
15472	TBC1D22B	1.338967e-01
15473	TBC1D23	1
15474	TBC1D24	1
15475	TBC1D25	1
15476	TBC1D26	1
15477	TBC1D28	1
15478	TBC1D29	1
15479	TBC1D2B	2.620378e-01
15480	TBC1D3B	1
15481	TBC1D4	1
15482	TBC1D5	1.830695e-01
15483	TBC1D7	2.132473e-03
15484	TBC1D8	1
15485	TBC1D8B	3.593814e-02
15486	TBC1D9	1.217369e-01
15487	TBC1D9B	3.998953e-01
15488	TBCA	1
15489	TBCB	1
15490	TBCC	1
15491	TBCCD1	1.257840e-01
15492	TBCD	1
15493	TBCE	1
15494	TBCEL	1
15495	TBCK	1
15496	TBK1	9.862061e-02
In gene TBKBP1 the following bins exceed PROBCAP:
    THCA-EM-A3FJ-TP	categ 6	N = 1051    n = 1	mu =   7.09e-08
15497	TBKBP1	3.590306e-02
15498	TBL1X	1
15499	TBL1XR1	1
15500	TBL2	2.120180e-02
15501	TBL3	1
15502	TBP	1
15503	TBPL1	1
15504	TBPL2	1
15505	TBR1	1
15506	TBRG1	1
15507	TBRG4	1
15508	TBX1	1
15509	TBX10	1
15510	TBX15	1
15511	TBX18	1.904256e-01
15512	TBX19	1
15513	TBX2	1
15514	TBX20	1.036517e-01
15515	TBX21	1
15516	TBX22	1
In gene TBX3 the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 1229    n = 1	mu =   2.06e-07
15517	TBX3	1.361130e-01
15518	TBX4	1
15519	TBX5	1.322357e-01
15520	TBX6	1
15521	TBXA2R	1
15522	TBXAS1	1
15523	TC2N	1
15524	TCAP	1.841038e-02
15525	TCEA1	1
15526	TCEA2	1
15527	TCEA3	1
15528	TCEAL1	1
15529	TCEAL2	1
15530	TCEAL3	4.264149e-04
15531	TCEAL4	1
15532	TCEAL5	1
15533	TCEAL6	1
15534	TCEAL7	1
15535	TCEAL8	1
15536	TCEANC	1
15537	TCEB1	1
15538	TCEB2	1
15539	TCEB3	1
15540	TCEB3B	2.683924e-01
15541	TCEB3C	1
15542	TCERG1	1
15543	TCERG1L	1
15544	TCF12	1
15545	TCF19	1
15546	TCF20	1
15547	TCF21	1
15548	TCF23	1
15549	TCF25	1
15550	TCF3	1.769523e-01
15551	TCF4	1
15552	TCF7	1
15553	TCF7L1	1.663950e-02
15554	TCF7L2	3.015191e-01
15555	TCFL5	1
15556	TCHH	1
15557	TCHHL1	1
15558	TCHP	6.424406e-02
15559	TCIRG1	1
15560	TCL1A	1
Done

Running MutSig 2:
Scatter job 172: processing genes 15471 - 15560
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TBC1D7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.703240e-01	ci left: 4.600180e-02	ci right 5.466254e-02	k: 502	n:10000
Cons ci ratio: 3.484002e-01	ci left: 1.032396e-02	ci right 1.476677e-02	k: 124	n:10000
KS ci ratio: 8.415012e-02	ci left: 1.707441e-01	ci right 1.858438e-01	k: 1782	n:10000
TBC1D7   10000 perm   2 sec   (5188 perm/sec)   p_kst 1.782000e-01   p_cons 1.240000e-02   p_joint 5.020000e-02

Joint ci ratio: 1.730984e-01	ci left: 2.283264e-02	ci right 2.720694e-02	k: 499	n:20000
Cons ci ratio: 2.515060e-01	ci left: 1.049034e-02	ci right 1.355399e-02	k: 239	n:20000
KS ci ratio: 6.052902e-02	ci left: 1.680770e-01	ci right 1.786181e-01	k: 3466	n:20000
TBC1D7   20000 perm   6 sec   (3393 perm/sec)   p_kst 1.733000e-01   p_cons 1.195000e-02   p_joint 2.495000e-02

Joint ci ratio: 1.383377e-01	ci left: 2.426080e-02	ci right 2.789843e-02	k: 781	n:30000
Cons ci ratio: 2.047805e-01	ci left: 1.083028e-02	ci right 1.333222e-02	k: 361	n:30000
KS ci ratio: 4.891924e-02	ci left: 1.719696e-01	ci right 1.806265e-01	k: 5288	n:30000
TBC1D7   30000 perm   8 sec   (3654 perm/sec)   p_kst 1.762667e-01   p_cons 1.203333e-02   p_joint 2.603333e-02

Joint ci ratio: 2.528019e-01	ci left: 5.219877e-03	ci right 6.753176e-03	k: 238	n:40000
Cons ci ratio: 1.803318e-01	ci left: 1.062150e-02	ci right 1.275027e-02	k: 466	n:40000
KS ci ratio: 4.233261e-02	ci left: 1.727749e-01	ci right 1.802721e-01	k: 7060	n:40000
TBC1D7   40000 perm   10 sec   (3919 perm/sec)   p_kst 1.765000e-01   p_cons 1.165000e-02   p_joint 5.950000e-03

Joint ci ratio: 1.613990e-01	ci left: 1.071829e-02	ci right 1.261904e-02	k: 582	n:50000
Cons ci ratio: 1.623882e-01	ci left: 1.058390e-02	ci right 1.247345e-02	k: 575	n:50000
KS ci ratio: 3.802907e-02	ci left: 1.719166e-01	ci right 1.786011e-01	k: 8762	n:50000
TBC1D7   50000 perm   12 sec   (4078 perm/sec)   p_kst 1.752400e-01   p_cons 1.150000e-02   p_joint 1.164000e-02

Joint ci ratio: 1.993989e-01	ci left: 5.761726e-03	ci right 7.053383e-03	k: 383	n:60000
Cons ci ratio: 1.491373e-01	ci left: 1.053382e-02	ci right 1.224727e-02	k: 682	n:60000
KS ci ratio: 3.458534e-02	ci left: 1.732913e-01	ci right 1.794067e-01	k: 10580	n:60000
TBC1D7   60000 perm   15 sec   (4131 perm/sec)   p_kst 1.763333e-01   p_cons 1.136667e-02   p_joint 6.383333e-03

Joint ci ratio: 1.790597e-01	ci left: 6.190926e-03	ci right 7.421919e-03	k: 475	n:70000
Cons ci ratio: 1.379723e-01	ci left: 1.061293e-02	ci right 1.219939e-02	k: 797	n:70000
KS ci ratio: 3.198287e-02	ci left: 1.738524e-01	ci right 1.795173e-01	k: 12367	n:70000
TBC1D7   70000 perm   17 sec   (4160 perm/sec)   p_kst 1.766714e-01   p_cons 1.138571e-02   p_joint 6.785714e-03

Joint ci ratio: 1.674952e-01	ci left: 6.230238e-03	ci right 7.380966e-03	k: 543	n:80000
Cons ci ratio: 1.287050e-01	ci left: 1.072427e-02	ci right 1.221147e-02	k: 916	n:80000
KS ci ratio: 2.992992e-02	ci left: 1.739134e-01	ci right 1.792101e-01	k: 14124	n:80000
TBC1D7   80000 perm   19 sec   (4117 perm/sec)   p_kst 1.765500e-01   p_cons 1.145000e-02   p_joint 6.787500e-03

Joint ci ratio: 1.535553e-01	ci left: 6.636638e-03	ci right 7.751036e-03	k: 646	n:90000
Cons ci ratio: 1.219209e-01	ci left: 1.066278e-02	ci right 1.205787e-02	k: 1021	n:90000
KS ci ratio: 2.832284e-02	ci left: 1.729976e-01	ci right 1.779789e-01	k: 15793	n:90000
TBC1D7   90000 perm   22 sec   (4139 perm/sec)   p_kst 1.754778e-01   p_cons 1.134444e-02   p_joint 7.177778e-03

Joint ci ratio: 9.687450e-02	ci left: 1.532898e-02	ci right 1.689926e-02	k: 1610	n:100000
Cons ci ratio: 1.161598e-01	ci left: 1.060552e-02	ci right 1.192306e-02	k: 1125	n:100000
KS ci ratio: 2.687582e-02	ci left: 1.730573e-01	ci right 1.777816e-01	k: 17541	n:100000
TBC1D7   100000 perm   24 sec   (4128 perm/sec)   p_kst 1.754100e-01   p_cons 1.125000e-02   p_joint 1.610000e-02

Joint ci ratio: 9.268840e-02	ci left: 1.525786e-02	ci right 1.674964e-02	k: 1759	n:110000
Cons ci ratio: 1.108265e-01	ci left: 1.062184e-02	ci right 1.187685e-02	k: 1236	n:110000
KS ci ratio: 2.555381e-02	ci left: 1.739706e-01	ci right 1.784828e-01	k: 19384	n:110000
TBC1D7   110000 perm   27 sec   (4118 perm/sec)   p_kst 1.762182e-01   p_cons 1.123636e-02   p_joint 1.599091e-02

Joint ci ratio: 1.035190e-01	ci left: 1.119668e-02	ci right 1.242708e-02	k: 1416	n:120000
Cons ci ratio: 1.060469e-01	ci left: 1.066094e-02	ci right 1.186286e-02	k: 1350	n:120000
KS ci ratio: 2.443666e-02	ci left: 1.744130e-01	ci right 1.787360e-01	k: 21188	n:120000
TBC1D7   120000 perm   29 sec   (4092 perm/sec)   p_kst 1.765667e-01   p_cons 1.125000e-02   p_joint 1.180000e-02

Joint ci ratio: 8.576522e-02	ci left: 1.513663e-02	ci right 1.650048e-02	k: 2055	n:130000
Cons ci ratio: 1.022968e-01	ci left: 1.059753e-02	ci right 1.174751e-02	k: 1451	n:130000
KS ci ratio: 2.345426e-02	ci left: 1.747908e-01	ci right 1.789467e-01	k: 22992	n:130000
TBC1D7   130000 perm   32 sec   (4057 perm/sec)   p_kst 1.768615e-01   p_cons 1.116154e-02   p_joint 1.580769e-02

Joint ci ratio: 8.242171e-02	ci left: 1.524423e-02	ci right 1.656165e-02	k: 2225	n:140000
Cons ci ratio: 9.837524e-02	ci left: 1.066229e-02	ci right 1.177238e-02	k: 1569	n:140000
KS ci ratio: 2.257766e-02	ci left: 1.751674e-01	ci right 1.791745e-01	k: 24803	n:140000
TBC1D7   140000 perm   35 sec   (4026 perm/sec)   p_kst 1.771643e-01   p_cons 1.120714e-02   p_joint 1.589286e-02

Outputting figure to mutsig2_images.part000000000172/TBC1D7.2_910_140000_0.17716_0.011207_0.015893.png
                gene_name: TBC1D7
               theta_stop: 0.098 
                    nperm: 140000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.18 
       ci_ks_bounds_right: 0.18 
                   p_cons: 0.011 
      ci_cons_bounds_left: 0.011 
     ci_cons_bounds_right: 0.012 
                  p_joint: 0.016 
     ci_joint_bounds_left: 0.015 
    ci_joint_bounds_right: 0.017 

Current progress: 17 percent done.
TBC1D8B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.574045e-02	ci left: 6.896003e-01	ci right 7.076838e-01	k: 6987	n:10000
Cons ci ratio: 4.307694e-02	ci left: 4.431087e-01	ci right 4.627188e-01	k: 4529	n:10000
KS ci ratio: 6.224134e-02	ci left: 2.750767e-01	ci right 2.928493e-01	k: 2839	n:10000
TBC1D8B   10000 perm   2 sec   (5670 perm/sec)   p_kst 2.839000e-01   p_cons 4.529000e-01   p_joint 6.987000e-01

Outputting figure to mutsig2_images.part000000000172/TBC1D8B.2_3513_10000_0.2839_0.4529_0.6987.png
                gene_name: TBC1D8B
               theta_stop: 0.062 
                    nperm: 10000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.29 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 0.70 
     ci_joint_bounds_left: 0.69 
    ci_joint_bounds_right: 0.71 

Current progress: 33 percent done.
TBC1D9
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.161767e-02	ci left: 7.583849e-01	ci right 7.750594e-01	k: 7668	n:10000
KS ci ratio: 5.468661e-03	ci left: 9.781297e-01	ci right 9.835850e-01	k: 9810	n:10000
TBC1D9   10000 perm   2 sec   (5433 perm/sec)   p_kst 9.810000e-01   p_cons 7.668000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000172/TBC1D9.2_3885_10000_0.981_0.7668_1.png
                gene_name: TBC1D9
               theta_stop: 0.022 
                    nperm: 10000 
                     p_ks: 0.98 
        ci_ks_bounds_left: 0.98 
       ci_ks_bounds_right: 0.98 
                   p_cons: 0.77 
      ci_cons_bounds_left: 0.76 
     ci_cons_bounds_right: 0.78 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
TBL2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.068314e-02	ci left: 3.647032e-01	ci right 3.837701e-01	k: 3742	n:10000
KS ci ratio: 9.777696e-03	ci left: 9.367201e-01	ci right 9.460207e-01	k: 9415	n:10000
TBL2   10000 perm   1 sec   (6742 perm/sec)   p_kst 9.415000e-01   p_cons 3.742000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000172/TBL2.2_1372_10000_0.9415_0.3742_1.png
                gene_name: TBL2
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.94 
       ci_ks_bounds_right: 0.95 
                   p_cons: 0.37 
      ci_cons_bounds_left: 0.36 
     ci_cons_bounds_right: 0.38 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
TCEAL3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.322310e-02	ci left: 7.314859e-01	ci right 7.487740e-01	k: 7402	n:10000
KS ci ratio: 9.901168e-03	ci left: 9.352693e-01	ci right 9.446723e-01	k: 9401	n:10000
TCEAL3   10000 perm   1 sec   (6899 perm/sec)   p_kst 9.401000e-01   p_cons 7.402000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000172/TCEAL3.2_607_10000_0.9401_0.7402_1.png
                gene_name: TCEAL3
               theta_stop: 0.023 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.94 
       ci_ks_bounds_right: 0.94 
                   p_cons: 0.74 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.75 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 83 percent done.
TCF7L1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.853449e-02	ci left: 1.565950e-01	ci right 1.712014e-01	k: 1638	n:10000
Cons ci ratio: 8.446737e-02	ci left: 1.696626e-01	ci right 1.847259e-01	k: 1771	n:10000
KS ci ratio: 5.742002e-02	ci left: 3.086781e-01	ci right 3.270281e-01	k: 3178	n:10000
TCF7L1   10000 perm   2 sec   (6172 perm/sec)   p_kst 3.178000e-01   p_cons 1.771000e-01   p_joint 1.638000e-01

Outputting figure to mutsig2_images.part000000000172/TCF7L1.2_1815_10000_0.3178_0.1771_0.1638.png
                gene_name: TCF7L1
               theta_stop: 0.089 
                    nperm: 10000 
                     p_ks: 0.32 
        ci_ks_bounds_left: 0.31 
       ci_ks_bounds_right: 0.33 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.17 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.17 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000172
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 172 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1712>
Subject: Job 8704385: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1712>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000173> was used as the working directory.
Started at Thu Nov 15 19:37:10 2012
Results reported at Thu Nov 15 22:37:35 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000173.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000173.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 173  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000173.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10960.19 sec.
    Max Memory :      6210 MB
    Max Swap   :      8654 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
173
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 173
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 173: processing genes 15561 - 15650
Calculating significance of each gene.
Using projection method.
15561	TCL1B	5.203277e-02
15562	TCN1	1
15563	TCN2	1.052480e-01
15564	TCOF1	1
15565	TCP1	1
15566	TCP10	1
15567	TCP10L	1
15568	TCP10L2	1
15569	TCP11	1
15570	TCP11L1	1.271447e-01
15571	TCP11L2	5.696206e-02
15572	TCTA	1
15573	TCTE1	2.333941e-01
15574	TCTE3	1
15575	TCTEX1D1	1
15576	TCTEX1D2	1
15577	TCTN1	1
15578	TCTN2	1
15579	TCTN3	1
15580	TDG	1
15581	TDGF1	1
15582	TDO2	1.541504e-01
15583	TDP1	1
15584	TDP2	1
15585	TDRD1	1
15586	TDRD10	1
15587	TDRD3	1
15588	TDRD5	1
15589	TDRD6	1
15590	TDRD7	3.196819e-02
15591	TDRD9	1
15592	TDRKH	1
15593	TEAD1	1
15594	TEAD2	1
15595	TEAD3	1
15596	TEAD4	1.465608e-01
15597	TEC	1
In gene TECPR1 the following bins exceed PROBCAP:
    THCA-EL-A3GO-TP	categ 6	N = 2122    n = 1	mu =   1.02e-07
15598	TECPR1	1.250579e-01
15599	TECPR2	3.376306e-01
15600	TECR	1
15601	TECRL	1
15602	TECTA	1.974649e-01
15603	TECTB	1
15604	TEDDM1	1
15605	TEF	1
15606	TEK	6.367757e-02
15607	TEKT1	1
15608	TEKT2	1
15609	TEKT3	1
15610	TEKT4	1
15611	TEKT5	1
15612	TELO2	1
15613	TENC1	1
15614	TEP1	3.458518e-01
15615	TEPP	8.068088e-02
15616	TERF1	1
15617	TERF2	1
15618	TERF2IP	1
15619	TERT	6.674330e-02
15620	TES	1.127045e-01
15621	TESC	1
15622	TESK1	1
15623	TESK2	1
15624	TET1	4.584276e-01
15625	TET2	1
15626	TET3	1.952316e-01
15627	TEX10	1
15628	TEX101	1.129810e-01
15629	TEX11	2.445244e-01
15630	TEX12	3.549923e-02
15631	TEX13A	1
15632	TEX13B	1
15633	TEX14	1.793563e-01
In gene TEX15 the following bins exceed PROBCAP:
    THCA-BJ-A0ZE-TP	categ 6	N = 8386    n = 1	mu =   9.96e-08
15634	TEX15	2.893621e-01
15635	TEX19	1
15636	TEX2	1
15637	TEX261	1
15638	TEX264	1
15639	TEX9	1
15640	TF	1
15641	TFAM	1
15642	TFAP2A	1
15643	TFAP2B	1
15644	TFAP2C	1
15645	TFAP2D	1.023417e-01
15646	TFAP2E	1
15647	TFAP4	1
15648	TFB1M	1
15649	TFB2M	1
15650	TFCP2	1
Done

Running MutSig 2:
Scatter job 173: processing genes 15561 - 15650
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TDRD7
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.039378e-02	ci left: 7.788424e-01	ci right 7.949902e-01	k: 7870	n:10000
Cons ci ratio: 2.454756e-02	ci left: 7.093708e-01	ci right 7.271019e-01	k: 7183	n:10000
KS ci ratio: 3.914713e-02	ci left: 4.907512e-01	ci right 5.104484e-01	k: 5006	n:10000
TDRD7   10000 perm   2 sec   (4884 perm/sec)   p_kst 5.006000e-01   p_cons 7.183000e-01   p_joint 7.870000e-01

Outputting figure to mutsig2_images.part000000000173/TDRD7.2_3361_10000_0.5006_0.7183_0.787.png
                gene_name: TDRD7
               theta_stop: 0.039 
                    nperm: 10000 
                     p_ks: 0.50 
        ci_ks_bounds_left: 0.49 
       ci_ks_bounds_right: 0.51 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.79 
     ci_joint_bounds_left: 0.78 
    ci_joint_bounds_right: 0.79 

Current progress: 17 percent done.
TECTA
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.744606e-02	ci left: 8.272725e-01	ci right 8.419321e-01	k: 8347	n:10000
KS ci ratio: 3.279574e-02	ci left: 5.784793e-01	ci right 5.978693e-01	k: 5882	n:10000
TECTA   10000 perm   2 sec   (4780 perm/sec)   p_kst 5.882000e-01   p_cons 8.347000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000173/TECTA.2_6558_10000_0.5882_0.8347_1.png
                gene_name: TECTA
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.84 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
TEK
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.124280e-02	ci left: 7.646610e-01	ci right 7.811797e-01	k: 7730	n:10000
KS ci ratio: 2.765211e-02	ci left: 6.583700e-01	ci right 6.769322e-01	k: 6677	n:10000
TEK   10000 perm   2 sec   (5601 perm/sec)   p_kst 6.677000e-01   p_cons 7.730000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000173/TEK.2_3467_10000_0.6677_0.773_1.png
                gene_name: TEK
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.67 
        ci_ks_bounds_left: 0.66 
       ci_ks_bounds_right: 0.68 
                   p_cons: 0.77 
      ci_cons_bounds_left: 0.76 
     ci_cons_bounds_right: 0.78 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
TEP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.679838e-03	ci left: 9.378606e-01	ci right 9.470795e-01	k: 9426	n:10000
Cons ci ratio: 2.524631e-02	ci left: 6.977684e-01	ci right 7.157111e-01	k: 7068	n:10000
KS ci ratio: 5.576724e-02	ci left: 3.213802e-01	ci right 3.399186e-01	k: 3306	n:10000
TEP1   10000 perm   2 sec   (4358 perm/sec)   p_kst 3.306000e-01   p_cons 7.068000e-01   p_joint 9.426000e-01

Outputting figure to mutsig2_images.part000000000173/TEP1.2_8100_10000_0.3306_0.7068_0.9426.png
                gene_name: TEP1
               theta_stop: 0.056 
                    nperm: 10000 
                     p_ks: 0.33 
        ci_ks_bounds_left: 0.32 
       ci_ks_bounds_right: 0.34 
                   p_cons: 0.71 
      ci_cons_bounds_left: 0.70 
     ci_cons_bounds_right: 0.72 
                  p_joint: 0.94 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.95 

Current progress: 67 percent done.
TERT
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.684256e-02	ci left: 3.130436e-01	ci right 3.314601e-01	k: 3222	n:10000
Cons ci ratio: 6.333011e-02	ci left: 2.681458e-01	ci right 2.857843e-01	k: 2769	n:10000
KS ci ratio: 7.182444e-02	ci left: 2.211891e-01	ci right 2.377688e-01	k: 2294	n:10000
TERT   10000 perm   2 sec   (5732 perm/sec)   p_kst 2.294000e-01   p_cons 2.769000e-01   p_joint 3.222000e-01

Outputting figure to mutsig2_images.part000000000173/TERT.2_3463_10000_0.2294_0.2769_0.3222.png
                gene_name: TERT
               theta_stop: 0.072 
                    nperm: 10000 
                     p_ks: 0.23 
        ci_ks_bounds_left: 0.22 
       ci_ks_bounds_right: 0.24 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.32 
     ci_joint_bounds_left: 0.31 
    ci_joint_bounds_right: 0.33 

Current progress: 83 percent done.
TEX15
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.397357e-01	ci left: 1.780048e-03	ci right 3.925945e-03	k: 27	n:10000
Cons ci ratio: 1.575280e-02	ci left: 8.540644e-01	ci right 8.677246e-01	k: 8610	n:10000
KS ci ratio: 1.959510e+00	ci left: 6.187149e-05	ci right 8.764745e-04	k: 3	n:10000
TEX15   10000 perm   2 sec   (4190 perm/sec)   p_kst 3.000000e-04   p_cons 8.610000e-01   p_joint 2.700000e-03

Joint ci ratio: 9.795835e-01	ci left: 4.198281e-04	ci right 1.236710e-03	k: 15	n:20000
Cons ci ratio: 1.249620e-02	ci left: 8.258345e-01	ci right 8.362691e-01	k: 16622	n:20000
KS ci ratio: 1.959755e+00	ci left: 3.093467e-05	ci right 4.383005e-04	k: 3	n:20000
TEX15   20000 perm   5 sec   (3784 perm/sec)   p_kst 1.500000e-04   p_cons 8.311000e-01   p_joint 7.500000e-04

Joint ci ratio: 8.762318e-01	ci left: 3.813497e-04	ci right 9.888526e-04	k: 19	n:30000
Cons ci ratio: 1.014962e-02	ci left: 8.282929e-01	ci right 8.367759e-01	k: 24977	n:30000
KS ci ratio: 1.752902e+00	ci left: 3.633000e-05	ci right 3.413508e-04	k: 4	n:30000
TEX15   30000 perm   8 sec   (3659 perm/sec)   p_kst 1.333333e-04   p_cons 8.325667e-01   p_joint 6.333333e-04

Joint ci ratio: 9.797917e-01	ci left: 2.098994e-04	ci right 6.184302e-04	k: 15	n:40000
Cons ci ratio: 8.778464e-03	ci left: 8.292326e-01	ci right 8.365690e-01	k: 33317	n:40000
KS ci ratio: 1.752946e+00	ci left: 2.724728e-05	ci right 2.560197e-04	k: 4	n:40000
TEX15   40000 perm   11 sec   (3564 perm/sec)   p_kst 1.000000e-04   p_cons 8.329250e-01   p_joint 3.750000e-04

Joint ci ratio: 8.991298e-01	ci left: 2.133723e-04	ci right 5.688958e-04	k: 18	n:50000
Cons ci ratio: 7.854624e-03	ci left: 8.295201e-01	ci right 8.360812e-01	k: 41641	n:50000
KS ci ratio: 1.600221e+00	ci left: 3.247050e-05	ci right 2.333511e-04	k: 5	n:50000
TEX15   50000 perm   14 sec   (3498 perm/sec)   p_kst 1.000000e-04   p_cons 8.328200e-01   p_joint 3.600000e-04

Joint ci ratio: 5.189657e-01	ci left: 7.051046e-04	ci right 1.211842e-03	k: 56	n:60000
Cons ci ratio: 7.175471e-03	ci left: 8.296052e-01	ci right 8.355960e-01	k: 49957	n:60000
KS ci ratio: 1.385825e+00	ci left: 4.690730e-05	ci right 2.403631e-04	k: 7	n:60000
TEX15   60000 perm   17 sec   (3431 perm/sec)   p_kst 1.166667e-04   p_cons 8.326167e-01   p_joint 9.333333e-04

Joint ci ratio: 4.936478e-01	ci left: 6.791374e-04	ci right 1.135304e-03	k: 62	n:70000
Cons ci ratio: 6.648685e-03	ci left: 8.295978e-01	ci right 8.351461e-01	k: 58267	n:70000
KS ci ratio: 1.385840e+00	ci left: 4.020610e-05	ci right 2.060273e-04	k: 7	n:70000
TEX15   70000 perm   21 sec   (3387 perm/sec)   p_kst 1.000000e-04   p_cons 8.323857e-01   p_joint 8.857143e-04

Joint ci ratio: 4.976444e-01	ci left: 5.833007e-04	ci right 9.793569e-04	k: 61	n:80000
Cons ci ratio: 6.220618e-03	ci left: 8.297180e-01	ci right 8.349079e-01	k: 66586	n:80000
KS ci ratio: 1.306585e+00	ci left: 4.317386e-05	ci right 1.970303e-04	k: 8	n:80000
TEX15   80000 perm   24 sec   (3300 perm/sec)   p_kst 1.000000e-04   p_cons 8.323250e-01   p_joint 7.625000e-04

Joint ci ratio: 5.842097e-01	ci left: 3.552492e-04	ci right 6.562556e-04	k: 44	n:90000
Cons ci ratio: 5.866774e-03	ci left: 8.297759e-01	ci right 8.346693e-01	k: 74901	n:90000
KS ci ratio: 1.239537e+00	ci left: 4.572735e-05	ci right 1.898226e-04	k: 9	n:90000
TEX15   90000 perm   28 sec   (3240 perm/sec)   p_kst 1.000000e-04   p_cons 8.322333e-01   p_joint 4.888889e-04

Joint ci ratio: 5.716535e-01	ci left: 3.367969e-04	ci right 6.135284e-04	k: 46	n:100000
Cons ci ratio: 5.571949e-03	ci left: 8.295877e-01	ci right 8.342330e-01	k: 83192	n:100000
KS ci ratio: 1.239545e+00	ci left: 4.115453e-05	ci right 1.708411e-04	k: 9	n:100000
TEX15   100000 perm   31 sec   (3200 perm/sec)   p_kst 9.000000e-05   p_cons 8.319200e-01   p_joint 4.600000e-04

Joint ci ratio: 5.656772e-01	ci left: 3.139603e-04	ci right 5.681421e-04	k: 47	n:110000
Cons ci ratio: 4.809066e-03	ci left: 8.558867e-01	ci right 8.600217e-01	k: 94376	n:110000
KS ci ratio: 1.239551e+00	ci left: 3.741314e-05	ci right 1.553107e-04	k: 9	n:110000
TEX15   110000 perm   35 sec   (3172 perm/sec)   p_kst 8.181818e-05   p_cons 8.579636e-01   p_joint 4.272727e-04

Joint ci ratio: 5.487909e-01	ci left: 3.092734e-04	ci right 5.492866e-04	k: 50	n:120000
Cons ci ratio: 4.603166e-03	ci left: 8.560374e-01	ci right 8.599953e-01	k: 102963	n:120000
KS ci ratio: 1.131545e+00	ci left: 4.576053e-05	ci right 1.640111e-04	k: 11	n:120000
TEX15   120000 perm   38 sec   (3140 perm/sec)   p_kst 9.166667e-05   p_cons 8.580250e-01   p_joint 4.166667e-04

Joint ci ratio: 5.383416e-01	ci left: 2.987531e-04	ci right 5.245141e-04	k: 52	n:130000
Cons ci ratio: 4.420934e-03	ci left: 8.562068e-01	ci right 8.600080e-01	k: 111555	n:130000
KS ci ratio: 1.131550e+00	ci left: 4.224043e-05	ci right 1.513952e-04	k: 11	n:130000
TEX15   130000 perm   42 sec   (3112 perm/sec)   p_kst 8.461538e-05   p_cons 8.581154e-01   p_joint 4.000000e-04

Joint ci ratio: 5.284670e-01	ci left: 2.897733e-04	ci right 5.032439e-04	k: 54	n:140000
Cons ci ratio: 4.256010e-03	ci left: 8.565125e-01	ci right 8.601727e-01	k: 120169	n:140000
KS ci ratio: 1.131554e+00	ci left: 3.922321e-05	ci right 1.405816e-04	k: 11	n:140000
TEX15   140000 perm   45 sec   (3083 perm/sec)   p_kst 7.857143e-05   p_cons 8.583500e-01   p_joint 3.857143e-04

Joint ci ratio: 5.146200e-01	ci left: 2.878206e-04	ci right 4.923064e-04	k: 57	n:150000
Cons ci ratio: 4.111299e-03	ci left: 8.565986e-01	ci right 8.601342e-01	k: 128756	n:150000
KS ci ratio: 1.131557e+00	ci left: 3.660829e-05	ci right 1.312098e-04	k: 11	n:150000
TEX15   150000 perm   49 sec   (3055 perm/sec)   p_kst 7.333333e-05   p_cons 8.583733e-01   p_joint 3.800000e-04

Joint ci ratio: 6.625264e-01	ci left: 1.471668e-04	ci right 2.969349e-04	k: 34	n:160000
Cons ci ratio: 3.978262e-03	ci left: 8.568077e-01	ci right 8.602293e-01	k: 137364	n:160000
KS ci ratio: 1.131561e+00	ci left: 3.432024e-05	ci right 1.230094e-04	k: 11	n:160000
TEX15   160000 perm   53 sec   (3018 perm/sec)   p_kst 6.875000e-05   p_cons 8.585250e-01   p_joint 2.125000e-04

Joint ci ratio: 4.861218e-01	ci left: 2.899399e-04	ci right 4.807195e-04	k: 64	n:170000
Cons ci ratio: 3.862399e-03	ci left: 8.566745e-01	ci right 8.599956e-01	k: 145918	n:170000
KS ci ratio: 1.087168e+00	ci left: 3.647449e-05	ci right 1.233002e-04	k: 12	n:170000
TEX15   170000 perm   57 sec   (2982 perm/sec)   p_kst 7.058824e-05   p_cons 8.583412e-01   p_joint 3.764706e-04

Joint ci ratio: 4.684372e-01	ci left: 2.982681e-04	ci right 4.851082e-04	k: 69	n:180000
Cons ci ratio: 3.756526e-03	ci left: 8.565297e-01	ci right 8.597588e-01	k: 154467	n:180000
KS ci ratio: 1.047620e+00	ci left: 3.845583e-05	ci right 1.234990e-04	k: 13	n:180000
TEX15   180000 perm   61 sec   (2952 perm/sec)   p_kst 7.222222e-05   p_cons 8.581500e-01   p_joint 3.833333e-04

Joint ci ratio: 4.495637e-01	ci left: 3.104978e-04	ci right 4.947813e-04	k: 75	n:190000
Cons ci ratio: 3.650758e-03	ci left: 8.569459e-01	ci right 8.600853e-01	k: 163119	n:190000
KS ci ratio: 1.012097e+00	ci left: 4.028441e-05	ci right 1.236265e-04	k: 14	n:190000
TEX15   190000 perm   65 sec   (2923 perm/sec)   p_kst 7.368421e-05   p_cons 8.585211e-01   p_joint 3.947368e-04

Joint ci ratio: 4.409462e-01	ci left: 3.082906e-04	ci right 4.867141e-04	k: 78	n:200000
Cons ci ratio: 3.552985e-03	ci left: 8.573515e-01	ci right 8.604081e-01	k: 171777	n:200000
KS ci ratio: 1.012099e+00	ci left: 3.827016e-05	ci right 1.174453e-04	k: 14	n:200000
TEX15   200000 perm   69 sec   (2895 perm/sec)   p_kst 7.000000e-05   p_cons 8.588850e-01   p_joint 3.900000e-04

Joint ci ratio: 4.301898e-01	ci left: 3.105690e-04	ci right 4.846611e-04	k: 82	n:210000
Cons ci ratio: 3.465848e-03	ci left: 8.574946e-01	ci right 8.604764e-01	k: 180388	n:210000
KS ci ratio: 1.012101e+00	ci left: 3.644775e-05	ci right 1.118528e-04	k: 14	n:210000
TEX15   210000 perm   73 sec   (2866 perm/sec)   p_kst 6.666667e-05   p_cons 8.589905e-01   p_joint 3.904762e-04

Joint ci ratio: 4.177889e-01	ci left: 3.167546e-04	ci right 4.877692e-04	k: 87	n:220000
Cons ci ratio: 3.389395e-03	ci left: 8.572968e-01	ci right 8.602119e-01	k: 188927	n:220000
KS ci ratio: 9.799621e-01	ci left: 3.816133e-05	ci right 1.124531e-04	k: 15	n:220000
TEX15   220000 perm   78 sec   (2838 perm/sec)   p_kst 6.818182e-05   p_cons 8.587591e-01   p_joint 3.954545e-04

Joint ci ratio: 4.108455e-01	ci left: 3.146663e-04	ci right 4.809579e-04	k: 90	n:230000
Cons ci ratio: 3.312194e-03	ci left: 8.575273e-01	ci right 8.603766e-01	k: 197560	n:230000
KS ci ratio: 9.507024e-01	ci left: 3.976304e-05	ci right 1.129671e-04	k: 16	n:230000
TEX15   230000 perm   82 sec   (2810 perm/sec)   p_kst 6.956522e-05   p_cons 8.589565e-01   p_joint 3.913043e-04

Joint ci ratio: 3.919175e-01	ci left: 3.352719e-04	ci right 5.021814e-04	k: 99	n:240000
Cons ci ratio: 3.242431e-03	ci left: 8.575594e-01	ci right 8.603486e-01	k: 206150	n:240000
KS ci ratio: 8.992722e-01	ci left: 4.445034e-05	ci right 1.185298e-04	k: 18	n:240000
TEX15   240000 perm   86 sec   (2784 perm/sec)   p_kst 7.500000e-05   p_cons 8.589583e-01   p_joint 4.125000e-04

Joint ci ratio: 3.806626e-01	ci left: 3.435308e-04	ci right 5.084131e-04	k: 105	n:250000
Cons ci ratio: 3.176793e-03	ci left: 8.575975e-01	ci right 8.603302e-01	k: 214742	n:250000
KS ci ratio: 8.173373e-01	ci left: 5.514993e-05	ci right 1.332300e-04	k: 22	n:250000
TEX15   250000 perm   91 sec   (2757 perm/sec)   p_kst 8.800000e-05   p_cons 8.589680e-01   p_joint 4.200000e-04

Joint ci ratio: 3.703247e-01	ci left: 3.512177e-04	ci right 5.141031e-04	k: 111	n:260000
Cons ci ratio: 3.113651e-03	ci left: 8.577374e-01	ci right 8.604161e-01	k: 223361	n:260000
KS ci ratio: 8.001282e-01	ci left: 5.607783e-05	ci right 1.327328e-04	k: 23	n:260000
TEX15   260000 perm   95 sec   (2731 perm/sec)   p_kst 8.846154e-05   p_cons 8.590808e-01   p_joint 4.269231e-04

Joint ci ratio: 3.638840e-01	ci left: 3.516579e-04	ci right 5.112378e-04	k: 115	n:270000
Cons ci ratio: 3.056138e-03	ci left: 8.577076e-01	ci right 8.603365e-01	k: 231937	n:270000
KS ci ratio: 8.001296e-01	ci left: 5.400084e-05	ci right 1.278169e-04	k: 23	n:270000
TEX15   270000 perm   100 sec   (2705 perm/sec)   p_kst 8.518519e-05   p_cons 8.590259e-01   p_joint 4.259259e-04

Joint ci ratio: 4.226388e-01	ci left: 2.424890e-04	ci right 3.753573e-04	k: 85	n:280000
Cons ci ratio: 3.002672e-03	ci left: 8.576015e-01	ci right 8.601840e-01	k: 240491	n:280000
KS ci ratio: 7.543666e-01	ci left: 6.065824e-05	ci right 1.360543e-04	k: 26	n:280000
TEX15   280000 perm   105 sec   (2679 perm/sec)   p_kst 9.285714e-05   p_cons 8.588964e-01   p_joint 3.035714e-04

Joint ci ratio: 4.938191e-01	ci left: 1.639178e-04	ci right 2.740648e-04	k: 62	n:290000
Cons ci ratio: 2.950656e-03	ci left: 8.576069e-01	ci right 8.601445e-01	k: 249075	n:290000
KS ci ratio: 7.543679e-01	ci left: 5.856654e-05	ci right 1.313629e-04	k: 26	n:290000
TEX15   290000 perm   109 sec   (2653 perm/sec)   p_kst 8.965517e-05   p_cons 8.588793e-01   p_joint 2.137931e-04

Joint ci ratio: 4.824648e-01	ci left: 1.672226e-04	ci right 2.761512e-04	k: 65	n:300000
Cons ci ratio: 2.901930e-03	ci left: 8.575555e-01	ci right 8.600509e-01	k: 257642	n:300000
KS ci ratio: 7.407746e-01	ci left: 5.931138e-05	ci right 1.309426e-04	k: 27	n:300000
TEX15   300000 perm   114 sec   (2629 perm/sec)   p_kst 9.000000e-05   p_cons 8.588067e-01   p_joint 2.166667e-04

Joint ci ratio: 4.753169e-01	ci left: 1.675008e-04	ci right 2.744682e-04	k: 67	n:310000
Cons ci ratio: 2.853338e-03	ci left: 8.576955e-01	ci right 8.601494e-01	k: 266267	n:310000
KS ci ratio: 7.407757e-01	ci left: 5.739808e-05	ci right 1.267187e-04	k: 27	n:310000
TEX15   310000 perm   119 sec   (2604 perm/sec)   p_kst 8.709677e-05   p_cons 8.589258e-01   p_joint 2.161290e-04

Joint ci ratio: 4.651661e-01	ci left: 1.705302e-04	ci right 2.763695e-04	k: 70	n:320000
Cons ci ratio: 2.810437e-03	ci left: 8.575385e-01	ci right 8.599550e-01	k: 274800	n:320000
KS ci ratio: 7.278916e-01	ci left: 5.814388e-05	ci right 1.264594e-04	k: 28	n:320000
TEX15   320000 perm   124 sec   (2580 perm/sec)   p_kst 8.750000e-05   p_cons 8.587500e-01   p_joint 2.187500e-04

Joint ci ratio: 3.199934e-01	ci left: 3.819411e-04	ci right 5.300920e-04	k: 149	n:330000
Cons ci ratio: 2.766715e-03	ci left: 8.576285e-01	ci right 8.600076e-01	k: 283411	n:330000
KS ci ratio: 7.156572e-01	ci left: 5.885457e-05	ci right 1.262062e-04	k: 29	n:330000
TEX15   330000 perm   129 sec   (2555 perm/sec)   p_kst 8.787879e-05   p_cons 8.588212e-01   p_joint 4.515152e-04

Joint ci ratio: 3.147897e-01	ci left: 3.842422e-04	ci right 5.303744e-04	k: 154	n:340000
Cons ci ratio: 2.726260e-03	ci left: 8.575984e-01	ci right 8.599425e-01	k: 291983	n:340000
KS ci ratio: 6.929310e-01	ci left: 6.195080e-05	ci right 1.294152e-04	k: 31	n:340000
TEX15   340000 perm   134 sec   (2533 perm/sec)   p_kst 9.117647e-05   p_cons 8.587735e-01   p_joint 4.529412e-04

Joint ci ratio: 3.117876e-01	ci left: 3.811613e-04	ci right 5.244642e-04	k: 157	n:350000
Cons ci ratio: 2.686294e-03	ci left: 8.576821e-01	ci right 8.599920e-01	k: 300594	n:350000
KS ci ratio: 6.722408e-01	ci left: 6.490281e-05	ci right 1.324097e-04	k: 33	n:350000
TEX15   350000 perm   139 sec   (2510 perm/sec)   p_kst 9.428571e-05   p_cons 8.588400e-01   p_joint 4.485714e-04

Joint ci ratio: 3.023636e-01	ci left: 3.962121e-04	ci right 5.398060e-04	k: 167	n:360000
Cons ci ratio: 2.650008e-03	ci left: 8.575802e-01	ci right 8.598585e-01	k: 309140	n:360000
KS ci ratio: 6.532998e-01	ci left: 6.771974e-05	ci right 1.352100e-04	k: 35	n:360000
TEX15   360000 perm   145 sec   (2488 perm/sec)   p_kst 9.722222e-05   p_cons 8.587222e-01   p_joint 4.638889e-04

Joint ci ratio: 6.444109e-01	ci left: 6.814673e-05	ci right 1.346980e-04	k: 36	n:370000
Cons ci ratio: 2.612910e-03	ci left: 8.576928e-01	ci right 8.599394e-01	k: 317763	n:370000
KS ci ratio: 6.444109e-01	ci left: 6.814673e-05	ci right 1.346980e-04	k: 36	n:370000
TEX15   370000 perm   150 sec   (2465 perm/sec)   p_kst 9.729730e-05   p_cons 8.588189e-01   p_joint 9.729730e-05

Joint ci ratio: 6.358753e-01	ci left: 6.855725e-05	ci right 1.342071e-04	k: 37	n:380000
Cons ci ratio: 2.578165e-03	ci left: 8.577204e-01	ci right 8.599372e-01	k: 326356	n:380000
KS ci ratio: 6.358753e-01	ci left: 6.855725e-05	ci right 1.342071e-04	k: 37	n:380000
TEX15   380000 perm   156 sec   (2443 perm/sec)   p_kst 9.736842e-05   p_cons 8.588316e-01   p_joint 9.736842e-05

Joint ci ratio: 6.358762e-01	ci left: 6.679935e-05	ci right 1.307659e-04	k: 37	n:390000
Cons ci ratio: 2.545659e-03	ci left: 8.576620e-01	ci right 8.598506e-01	k: 334916	n:390000
KS ci ratio: 6.358762e-01	ci left: 6.679935e-05	ci right 1.307659e-04	k: 37	n:390000
TEX15   390000 perm   161 sec   (2422 perm/sec)   p_kst 9.487179e-05   p_cons 8.587590e-01   p_joint 9.487179e-05

Joint ci ratio: 2.730487e-01	ci left: 4.447555e-04	ci right 5.876420e-04	k: 205	n:400000
Cons ci ratio: 2.514247e-03	ci left: 8.576167e-01	ci right 8.597781e-01	k: 343480	n:400000
KS ci ratio: 6.276710e-01	ci left: 6.722850e-05	ci right 1.303926e-04	k: 38	n:400000
TEX15   400000 perm   167 sec   (2401 perm/sec)   p_kst 9.500000e-05   p_cons 8.587000e-01   p_joint 5.125000e-04

Joint ci ratio: 2.672714e-01	ci left: 4.543728e-04	ci right 5.967431e-04	k: 214	n:410000
Cons ci ratio: 2.484395e-03	ci left: 8.575322e-01	ci right 8.596677e-01	k: 352027	n:410000
KS ci ratio: 6.121698e-01	ci left: 6.969988e-05	ci right 1.328480e-04	k: 40	n:410000
TEX15   410000 perm   172 sec   (2380 perm/sec)   p_kst 9.756098e-05   p_cons 8.586024e-01   p_joint 5.219512e-04

Joint ci ratio: 2.636180e-01	ci left: 4.568897e-04	ci right 5.977689e-04	k: 220	n:420000
Cons ci ratio: 2.455122e-03	ci left: 8.574972e-01	ci right 8.596074e-01	k: 360593	n:420000
KS ci ratio: 6.048382e-01	ci left: 7.005400e-05	ci right 1.324290e-04	k: 41	n:420000
TEX15   420000 perm   178 sec   (2360 perm/sec)   p_kst 9.761905e-05   p_cons 8.585548e-01   p_joint 5.238095e-04

Joint ci ratio: 2.606857e-01	ci left: 4.571282e-04	ci right 5.962576e-04	k: 225	n:430000
Cons ci ratio: 2.426070e-03	ci left: 8.575433e-01	ci right 8.596286e-01	k: 369193	n:430000
KS ci ratio: 6.048389e-01	ci left: 6.842481e-05	ci right 1.293493e-04	k: 41	n:430000
TEX15   430000 perm   184 sec   (2339 perm/sec)   p_kst 9.534884e-05   p_cons 8.585884e-01   p_joint 5.232558e-04

Joint ci ratio: 2.704408e-01	ci left: 4.127938e-04	ci right 5.439302e-04	k: 209	n:440000
Cons ci ratio: 2.399170e-03	ci left: 8.574712e-01	ci right 8.595331e-01	k: 377742	n:440000
KS ci ratio: 6.048396e-01	ci left: 6.686969e-05	ci right 1.264096e-04	k: 41	n:440000
TEX15   440000 perm   190 sec   (2319 perm/sec)   p_kst 9.318182e-05   p_cons 8.585045e-01   p_joint 4.750000e-04

Joint ci ratio: 2.654313e-01	ci left: 4.202046e-04	ci right 5.508116e-04	k: 217	n:450000
Cons ci ratio: 2.374121e-03	ci left: 8.573022e-01	ci right 8.593421e-01	k: 386246	n:450000
KS ci ratio: 5.909327e-01	ci left: 6.915487e-05	ci right 1.287106e-04	k: 43	n:450000
TEX15   450000 perm   196 sec   (2298 perm/sec)   p_kst 9.555556e-05   p_cons 8.583244e-01   p_joint 4.822222e-04

Joint ci ratio: 2.672790e-01	ci left: 4.049830e-04	ci right 5.318819e-04	k: 214	n:460000
Cons ci ratio: 2.348179e-03	ci left: 8.573128e-01	ci right 8.593305e-01	k: 394829	n:460000
KS ci ratio: 5.843299e-01	ci left: 6.950185e-05	ci right 1.284065e-04	k: 44	n:460000
TEX15   460000 perm   202 sec   (2278 perm/sec)   p_kst 9.565217e-05   p_cons 8.583239e-01   p_joint 4.652174e-04

Joint ci ratio: 3.880953e-01	ci left: 1.750377e-04	ci right 2.611092e-04	k: 101	n:470000
Cons ci ratio: 2.323211e-03	ci left: 8.573082e-01	ci right 8.593044e-01	k: 403405	n:470000
KS ci ratio: 5.488794e-01	ci left: 7.896050e-05	ci right 1.402503e-04	k: 50	n:470000
TEX15   470000 perm   208 sec   (2260 perm/sec)   p_kst 1.063830e-04   p_cons 8.583085e-01   p_joint 2.148936e-04

Joint ci ratio: 3.843456e-01	ci left: 1.751531e-04	ci right 2.602388e-04	k: 103	n:480000
Cons ci ratio: 2.298294e-03	ci left: 8.573813e-01	ci right 8.593561e-01	k: 412018	n:480000
KS ci ratio: 5.384231e-01	ci left: 8.090954e-05	ci right 1.420624e-04	k: 52	n:480000
TEX15   480000 perm   214 sec   (2242 perm/sec)   p_kst 1.083333e-04   p_cons 8.583708e-01   p_joint 2.145833e-04

Joint ci ratio: 3.789189e-01	ci left: 1.771137e-04	ci right 2.616348e-04	k: 106	n:490000
Cons ci ratio: 2.275747e-03	ci left: 8.572815e-01	ci right 8.592367e-01	k: 420548	n:490000
KS ci ratio: 5.334145e-01	ci left: 8.102272e-05	ci right 1.414779e-04	k: 53	n:490000
TEX15   490000 perm   220 sec   (2224 perm/sec)   p_kst 1.081633e-04   p_cons 8.582612e-01   p_joint 2.163265e-04

Joint ci ratio: 3.703633e-01	ci left: 1.826301e-04	ci right 2.673392e-04	k: 111	n:500000
Cons ci ratio: 2.253126e-03	ci left: 8.572641e-01	ci right 8.591998e-01	k: 429117	n:500000
KS ci ratio: 5.238022e-01	ci left: 8.286810e-05	ci right 1.431777e-04	k: 55	n:500000
TEX15   500000 perm   226 sec   (2208 perm/sec)   p_kst 1.100000e-04   p_cons 8.582340e-01   p_joint 2.220000e-04

Joint ci ratio: 3.687214e-01	ci left: 1.808277e-04	ci right 2.642394e-04	k: 112	n:510000
Cons ci ratio: 2.230592e-03	ci left: 8.573104e-01	ci right 8.592267e-01	k: 437718	n:510000
KS ci ratio: 5.191872e-01	ci left: 8.294573e-05	ci right 1.425872e-04	k: 56	n:510000
TEX15   510000 perm   233 sec   (2189 perm/sec)   p_kst 1.098039e-04   p_cons 8.582706e-01   p_joint 2.196078e-04

Joint ci ratio: 3.639219e-01	ci left: 1.825885e-04	ci right 2.654558e-04	k: 115	n:520000
Cons ci ratio: 2.209279e-03	ci left: 8.572932e-01	ci right 8.591912e-01	k: 446287	n:520000
KS ci ratio: 5.103111e-01	ci left: 8.469689e-05	ci right 1.441870e-04	k: 58	n:520000
TEX15   520000 perm   239 sec   (2172 perm/sec)   p_kst 1.115385e-04   p_cons 8.582442e-01   p_joint 2.211538e-04

Joint ci ratio: 3.623638e-01	ci left: 1.808581e-04	ci right 2.625055e-04	k: 116	n:530000
Cons ci ratio: 2.188497e-03	ci left: 8.572844e-01	ci right 8.591645e-01	k: 454860	n:530000
KS ci ratio: 5.103116e-01	ci left: 8.309881e-05	ci right 1.414665e-04	k: 58	n:530000
TEX15   530000 perm   246 sec   (2155 perm/sec)   p_kst 1.094340e-04   p_cons 8.582264e-01   p_joint 2.188679e-04

Joint ci ratio: 3.608255e-01	ci left: 1.791924e-04	ci right 2.596637e-04	k: 117	n:540000
Cons ci ratio: 2.168968e-03	ci left: 8.571999e-01	ci right 8.590629e-01	k: 463392	n:540000
KS ci ratio: 5.060412e-01	ci left: 8.317422e-05	ci right 1.409343e-04	k: 59	n:540000
TEX15   540000 perm   253 sec   (2138 perm/sec)   p_kst 1.092593e-04   p_cons 8.581333e-01   p_joint 2.166667e-04

Joint ci ratio: 3.593066e-01	ci left: 1.775881e-04	ci right 2.569246e-04	k: 118	n:550000
Cons ci ratio: 2.148314e-03	ci left: 8.573044e-01	ci right 8.591500e-01	k: 472026	n:550000
KS ci ratio: 5.060418e-01	ci left: 8.166194e-05	ci right 1.383719e-04	k: 59	n:550000
TEX15   550000 perm   259 sec   (2122 perm/sec)   p_kst 1.072727e-04   p_cons 8.582291e-01   p_joint 2.145455e-04

Joint ci ratio: 3.593073e-01	ci left: 1.744168e-04	ci right 2.523368e-04	k: 118	n:560000
Cons ci ratio: 2.129832e-03	ci left: 8.572227e-01	ci right 8.590522e-01	k: 480558	n:560000
KS ci ratio: 5.060423e-01	ci left: 8.020368e-05	ci right 1.359010e-04	k: 59	n:560000
TEX15   560000 perm   266 sec   (2105 perm/sec)   p_kst 1.053571e-04   p_cons 8.581393e-01   p_joint 2.107143e-04

Joint ci ratio: 3.534160e-01	ci left: 1.777463e-04	ci right 2.555529e-04	k: 122	n:570000
Cons ci ratio: 2.110677e-03	ci left: 8.572759e-01	ci right 8.590889e-01	k: 489165	n:570000
KS ci ratio: 4.978130e-01	ci left: 8.186090e-05	ci right 1.374664e-04	k: 61	n:570000
TEX15   570000 perm   273 sec   (2089 perm/sec)   p_kst 1.070175e-04   p_cons 8.581842e-01   p_joint 2.140351e-04

Joint ci ratio: 3.491831e-01	ci left: 1.793977e-04	ci right 2.567738e-04	k: 125	n:580000
Cons ci ratio: 2.092415e-03	ci left: 8.572823e-01	ci right 8.590796e-01	k: 497746	n:580000
KS ci ratio: 4.899725e-01	ci left: 8.346810e-05	ci right 1.389709e-04	k: 63	n:580000
TEX15   580000 perm   280 sec   (2073 perm/sec)   p_kst 1.086207e-04   p_cons 8.581828e-01   p_joint 2.155172e-04

Joint ci ratio: 3.491838e-01	ci left: 1.763570e-04	ci right 2.524218e-04	k: 125	n:590000
Cons ci ratio: 2.074070e-03	ci left: 8.573531e-01	ci right 8.591349e-01	k: 506365	n:590000
KS ci ratio: 4.899730e-01	ci left: 8.205337e-05	ci right 1.366155e-04	k: 63	n:590000
TEX15   590000 perm   287 sec   (2056 perm/sec)   p_kst 1.067797e-04   p_cons 8.582458e-01   p_joint 2.118644e-04

Joint ci ratio: 2.346295e-01	ci left: 4.104740e-04	ci right 5.211091e-04	k: 278	n:600000
Cons ci ratio: 2.056452e-03	ci left: 8.573916e-01	ci right 8.591583e-01	k: 514966	n:600000
KS ci ratio: 4.861894e-01	ci left: 8.214727e-05	ci right 1.362089e-04	k: 64	n:600000
TEX15   600000 perm   294 sec   (2039 perm/sec)   p_kst 1.066667e-04   p_cons 8.582767e-01   p_joint 4.633333e-04

Joint ci ratio: 2.337935e-01	ci left: 4.068311e-04	ci right 5.160372e-04	k: 280	n:610000
Cons ci ratio: 2.039907e-03	ci left: 8.573533e-01	ci right 8.591056e-01	k: 523521	n:610000
KS ci ratio: 4.861899e-01	ci left: 8.080058e-05	ci right 1.339760e-04	k: 64	n:610000
TEX15   610000 perm   302 sec   (2023 perm/sec)   p_kst 1.049180e-04   p_cons 8.582311e-01   p_joint 4.590164e-04

Joint ci ratio: 2.309344e-01	ci left: 4.109026e-04	ci right 5.196602e-04	k: 287	n:620000
Cons ci ratio: 2.024131e-03	ci left: 8.572710e-01	ci right 8.590095e-01	k: 532048	n:620000
KS ci ratio: 4.753434e-01	ci left: 8.374947e-05	ci right 1.372361e-04	k: 67	n:620000
TEX15   620000 perm   309 sec   (2008 perm/sec)   p_kst 1.080645e-04   p_cons 8.581419e-01   p_joint 4.629032e-04

Joint ci ratio: 2.567600e-01	ci left: 3.223958e-04	ci right 4.188039e-04	k: 232	n:630000
Cons ci ratio: 2.008178e-03	ci left: 8.572566e-01	ci right 8.589814e-01	k: 540616	n:630000
KS ci ratio: 4.753438e-01	ci left: 8.242009e-05	ci right 1.350578e-04	k: 67	n:630000
TEX15   630000 perm   316 sec   (1994 perm/sec)   p_kst 1.063492e-04   p_cons 8.581206e-01   p_joint 3.682540e-04

Joint ci ratio: 2.540484e-01	ci left: 3.246709e-04	ci right 4.205716e-04	k: 237	n:640000
Cons ci ratio: 1.992187e-03	ci left: 8.572928e-01	ci right 8.590039e-01	k: 549216	n:640000
KS ci ratio: 4.718867e-01	ci left: 8.250820e-05	ci right 1.346953e-04	k: 68	n:640000
TEX15   640000 perm   323 sec   (1979 perm/sec)   p_kst 1.062500e-04   p_cons 8.581500e-01   p_joint 3.703125e-04

Joint ci ratio: 2.509050e-01	ci left: 3.283227e-04	ci right 4.239148e-04	k: 243	n:650000
Cons ci ratio: 1.976410e-03	ci left: 8.573480e-01	ci right 8.590457e-01	k: 557829	n:650000
KS ci ratio: 4.651926e-01	ci left: 8.395237e-05	ci right 1.360608e-04	k: 70	n:650000
TEX15   650000 perm   331 sec   (1963 perm/sec)   p_kst 1.076923e-04   p_cons 8.581985e-01   p_joint 3.738462e-04

Joint ci ratio: 2.493768e-01	ci left: 3.276087e-04	ci right 4.223216e-04	k: 246	n:660000
Cons ci ratio: 1.961233e-03	ci left: 8.573728e-01	ci right 8.590574e-01	k: 566423	n:660000
KS ci ratio: 4.619509e-01	ci left: 8.401849e-05	ci right 1.356903e-04	k: 71	n:660000
TEX15   660000 perm   339 sec   (1947 perm/sec)   p_kst 1.075758e-04   p_cons 8.582167e-01   p_joint 3.727273e-04

Joint ci ratio: 2.488740e-01	ci left: 3.241183e-04	ci right 4.176040e-04	k: 247	n:670000
Cons ci ratio: 1.946568e-03	ci left: 8.573759e-01	ci right 8.590479e-01	k: 575003	n:670000
KS ci ratio: 4.619513e-01	ci left: 8.276446e-05	ci right 1.336651e-04	k: 71	n:670000
TEX15   670000 perm   347 sec   (1932 perm/sec)   p_kst 1.059701e-04   p_cons 8.582134e-01   p_joint 3.686567e-04

Joint ci ratio: 2.478768e-01	ci left: 3.221099e-04	ci right 4.145867e-04	k: 249	n:680000
Cons ci ratio: 1.932250e-03	ci left: 8.573760e-01	ci right 8.590357e-01	k: 583581	n:680000
KS ci ratio: 4.556656e-01	ci left: 8.414848e-05	ci right 1.349783e-04	k: 73	n:680000
TEX15   680000 perm   355 sec   (1917 perm/sec)   p_kst 1.073529e-04   p_cons 8.582074e-01   p_joint 3.661765e-04

Joint ci ratio: 2.468915e-01	ci left: 3.201605e-04	ci right 4.116561e-04	k: 251	n:690000
Cons ci ratio: 1.918380e-03	ci left: 8.573587e-01	ci right 8.590064e-01	k: 592147	n:690000
KS ci ratio: 4.496297e-01	ci left: 8.549696e-05	ci right 1.362491e-04	k: 75	n:690000
TEX15   690000 perm   363 sec   (1903 perm/sec)   p_kst 1.086957e-04   p_cons 8.581841e-01   p_joint 3.637681e-04

Joint ci ratio: 4.496301e-01	ci left: 8.427556e-05	ci right 1.343027e-04	k: 75	n:700000
Cons ci ratio: 1.904962e-03	ci left: 8.573219e-01	ci right 8.589580e-01	k: 600699	n:700000
KS ci ratio: 4.496301e-01	ci left: 8.427556e-05	ci right 1.343027e-04	k: 75	n:700000
TEX15   700000 perm   371 sec   (1889 perm/sec)   p_kst 1.071429e-04   p_cons 8.581414e-01   p_joint 1.071429e-04

Joint ci ratio: 4.467009e-01	ci left: 8.433802e-05	ci right 1.339775e-04	k: 76	n:710000
Cons ci ratio: 1.890650e-03	ci left: 8.574372e-01	ci right 8.590613e-01	k: 609358	n:710000
KS ci ratio: 4.467009e-01	ci left: 8.433802e-05	ci right 1.339775e-04	k: 76	n:710000
TEX15   710000 perm   378 sec   (1876 perm/sec)   p_kst 1.070423e-04   p_cons 8.582507e-01   p_joint 1.070423e-04

Joint ci ratio: 4.438282e-01	ci left: 8.439978e-05	ci right 1.336604e-04	k: 77	n:720000
Cons ci ratio: 1.877201e-03	ci left: 8.574784e-01	ci right 8.590909e-01	k: 617966	n:720000
KS ci ratio: 4.438282e-01	ci left: 8.439978e-05	ci right 1.336604e-04	k: 77	n:720000
TEX15   720000 perm   386 sec   (1864 perm/sec)   p_kst 1.069444e-04   p_cons 8.582861e-01   p_joint 1.069444e-04

Joint ci ratio: 4.438286e-01	ci left: 8.324360e-05	ci right 1.318295e-04	k: 77	n:730000
Cons ci ratio: 1.863826e-03	ci left: 8.575459e-01	ci right 8.591471e-01	k: 626594	n:730000
KS ci ratio: 4.438286e-01	ci left: 8.324360e-05	ci right 1.318295e-04	k: 77	n:730000
TEX15   730000 perm   394 sec   (1851 perm/sec)   p_kst 1.054795e-04   p_cons 8.583479e-01   p_joint 1.054795e-04

Joint ci ratio: 4.410106e-01	ci left: 8.331946e-05	ci right 1.315490e-04	k: 78	n:740000
Cons ci ratio: 1.851359e-03	ci left: 8.575291e-01	ci right 8.591195e-01	k: 635161	n:740000
KS ci ratio: 4.410106e-01	ci left: 8.331946e-05	ci right 1.315490e-04	k: 78	n:740000
TEX15   740000 perm   402 sec   (1839 perm/sec)   p_kst 1.054054e-04   p_cons 8.583257e-01   p_joint 1.054054e-04

Joint ci ratio: 4.410109e-01	ci left: 8.220853e-05	ci right 1.297950e-04	k: 78	n:750000
Cons ci ratio: 1.838877e-03	ci left: 8.575474e-01	ci right 8.591271e-01	k: 643754	n:750000
KS ci ratio: 4.410109e-01	ci left: 8.220853e-05	ci right 1.297950e-04	k: 78	n:750000
TEX15   750000 perm   411 sec   (1827 perm/sec)   p_kst 1.040000e-04   p_cons 8.583387e-01   p_joint 1.040000e-04

Joint ci ratio: 4.355321e-01	ci left: 8.346799e-05	ci right 1.310074e-04	k: 80	n:760000
Cons ci ratio: 1.826792e-03	ci left: 8.575456e-01	ci right 8.591149e-01	k: 652332	n:760000
KS ci ratio: 4.355321e-01	ci left: 8.346799e-05	ci right 1.310074e-04	k: 80	n:760000
TEX15   760000 perm   419 sec   (1815 perm/sec)   p_kst 1.052632e-04   p_cons 8.583316e-01   p_joint 1.052632e-04

Joint ci ratio: 4.328683e-01	ci left: 8.354071e-05	ci right 1.307459e-04	k: 81	n:770000
Cons ci ratio: 1.814351e-03	ci left: 8.576232e-01	ci right 8.591819e-01	k: 660971	n:770000
KS ci ratio: 4.328683e-01	ci left: 8.354071e-05	ci right 1.307459e-04	k: 81	n:770000
TEX15   770000 perm   427 sec   (1801 perm/sec)   p_kst 1.051948e-04   p_cons 8.584039e-01   p_joint 1.051948e-04

Joint ci ratio: 4.328685e-01	ci left: 8.246966e-05	ci right 1.290697e-04	k: 81	n:780000
Cons ci ratio: 1.802370e-03	ci left: 8.576706e-01	ci right 8.592191e-01	k: 669588	n:780000
KS ci ratio: 4.328685e-01	ci left: 8.246966e-05	ci right 1.290697e-04	k: 81	n:780000
TEX15   780000 perm   436 sec   (1789 perm/sec)   p_kst 1.038462e-04   p_cons 8.584462e-01   p_joint 1.038462e-04

Joint ci ratio: 4.302530e-01	ci left: 8.255403e-05	ci right 1.288384e-04	k: 82	n:790000
Cons ci ratio: 1.791397e-03	ci left: 8.576115e-01	ci right 8.591504e-01	k: 678122	n:790000
KS ci ratio: 4.302530e-01	ci left: 8.255403e-05	ci right 1.288384e-04	k: 82	n:790000
TEX15   790000 perm   445 sec   (1776 perm/sec)   p_kst 1.037975e-04   p_cons 8.583823e-01   p_joint 1.037975e-04

Joint ci ratio: 2.317529e-01	ci left: 3.160925e-04	ci right 4.000947e-04	k: 285	n:800000
Cons ci ratio: 1.780136e-03	ci left: 8.576203e-01	ci right 8.591496e-01	k: 686709	n:800000
KS ci ratio: 4.276843e-01	ci left: 8.263712e-05	ci right 1.286121e-04	k: 83	n:800000
TEX15   800000 perm   453 sec   (1764 perm/sec)   p_kst 1.037500e-04   p_cons 8.583863e-01   p_joint 3.562500e-04

Joint ci ratio: 2.313491e-01	ci left: 3.133530e-04	ci right 3.964614e-04	k: 286	n:810000
Cons ci ratio: 1.769157e-03	ci left: 8.576191e-01	ci right 8.591389e-01	k: 695288	n:810000
KS ci ratio: 4.251611e-01	ci left: 8.271895e-05	ci right 1.283907e-04	k: 84	n:810000
TEX15   810000 perm   462 sec   (1753 perm/sec)   p_kst 1.037037e-04   p_cons 8.583802e-01   p_joint 3.530864e-04

Joint ci ratio: 2.297536e-01	ci left: 3.141280e-04	ci right 3.967857e-04	k: 290	n:820000
Cons ci ratio: 1.758511e-03	ci left: 8.575995e-01	ci right 8.591101e-01	k: 703852	n:820000
KS ci ratio: 4.251614e-01	ci left: 8.171017e-05	ci right 1.268249e-04	k: 84	n:820000
TEX15   820000 perm   471 sec   (1742 perm/sec)   p_kst 1.024390e-04   p_cons 8.583561e-01   p_joint 3.536585e-04

Joint ci ratio: 2.285784e-01	ci left: 3.137503e-04	ci right 3.958268e-04	k: 293	n:830000
Cons ci ratio: 1.747812e-03	ci left: 8.576143e-01	ci right 8.591157e-01	k: 712444	n:830000
KS ci ratio: 4.226823e-01	ci left: 8.180198e-05	ci right 1.266296e-04	k: 85	n:830000
TEX15   830000 perm   479 sec   (1731 perm/sec)   p_kst 1.024096e-04   p_cons 8.583663e-01   p_joint 3.530120e-04

Joint ci ratio: 2.270391e-01	ci left: 3.145053e-04	ci right 3.961477e-04	k: 297	n:840000
Cons ci ratio: 1.737630e-03	ci left: 8.575834e-01	ci right 8.590760e-01	k: 720998	n:840000
KS ci ratio: 4.154969e-01	ci left: 8.402293e-05	ci right 1.290680e-04	k: 88	n:840000
TEX15   840000 perm   488 sec   (1720 perm/sec)   p_kst 1.047619e-04   p_cons 8.583310e-01   p_joint 3.535714e-04

Joint ci ratio: 2.240510e-01	ci left: 3.196854e-04	ci right 4.014296e-04	k: 305	n:850000
Cons ci ratio: 1.726863e-03	ci left: 8.576606e-01	ci right 8.591441e-01	k: 729643	n:850000
KS ci ratio: 4.109054e-01	ci left: 8.514275e-05	ci right 1.301458e-04	k: 90	n:850000
TEX15   850000 perm   497 sec   (1710 perm/sec)   p_kst 1.058824e-04   p_cons 8.584035e-01   p_joint 3.588235e-04

Joint ci ratio: 2.236862e-01	ci left: 3.170657e-04	ci right 3.979898e-04	k: 306	n:860000
Cons ci ratio: 1.716802e-03	ci left: 8.576637e-01	ci right 8.591385e-01	k: 738226	n:860000
KS ci ratio: 4.086662e-01	ci left: 8.519562e-05	ci right 1.299145e-04	k: 91	n:860000
TEX15   860000 perm   506 sec   (1699 perm/sec)   p_kst 1.058140e-04   p_cons 8.584023e-01   p_joint 3.558140e-04

Joint ci ratio: 2.204771e-01	ci left: 3.231908e-04	ci right 4.043344e-04	k: 315	n:870000
Cons ci ratio: 1.706528e-03	ci left: 8.577221e-01	ci right 8.591882e-01	k: 746857	n:870000
KS ci ratio: 4.064631e-01	ci left: 8.524793e-05	ci right 1.296879e-04	k: 92	n:870000
TEX15   870000 perm   515 sec   (1689 perm/sec)   p_kst 1.057471e-04   p_cons 8.584563e-01   p_joint 3.620690e-04

Joint ci ratio: 2.913412e-01	ci left: 1.757569e-04	ci right 2.367037e-04	k: 180	n:880000
Cons ci ratio: 1.697308e-03	ci left: 8.576539e-01	ci right 8.591119e-01	k: 755378	n:880000
KS ci ratio: 4.021616e-01	ci left: 8.632080e-05	ci right 1.307168e-04	k: 94	n:880000
TEX15   880000 perm   524 sec   (1678 perm/sec)   p_kst 1.068182e-04   p_cons 8.583841e-01   p_joint 2.045455e-04

Joint ci ratio: 2.889562e-01	ci left: 1.769076e-04	ci right 2.376595e-04	k: 183	n:890000
Cons ci ratio: 1.687853e-03	ci left: 8.576424e-01	ci right 8.590923e-01	k: 763948	n:890000
KS ci ratio: 4.000615e-01	ci left: 8.636114e-05	ci right 1.304845e-04	k: 95	n:890000
TEX15   890000 perm   534 sec   (1667 perm/sec)   p_kst 1.067416e-04   p_cons 8.583685e-01   p_joint 2.056180e-04

Joint ci ratio: 2.889565e-01	ci left: 1.749419e-04	ci right 2.350189e-04	k: 183	n:900000
Cons ci ratio: 1.678248e-03	ci left: 8.576758e-01	ci right 8.591175e-01	k: 772558	n:900000
KS ci ratio: 4.000618e-01	ci left: 8.540156e-05	ci right 1.290347e-04	k: 95	n:900000
TEX15   900000 perm   543 sec   (1656 perm/sec)   p_kst 1.055556e-04   p_cons 8.583978e-01   p_joint 2.033333e-04

Joint ci ratio: 3.979943e-01	ci left: 8.545170e-05	ci right 1.288253e-04	k: 96	n:910000
Cons ci ratio: 1.668285e-03	ci left: 8.577844e-01	ci right 8.592177e-01	k: 781237	n:910000
KS ci ratio: 3.979943e-01	ci left: 8.545170e-05	ci right 1.288253e-04	k: 96	n:910000
TEX15   910000 perm   553 sec   (1645 perm/sec)   p_kst 1.054945e-04   p_cons 8.585022e-01   p_joint 1.054945e-04

Joint ci ratio: 3.959585e-01	ci left: 8.550131e-05	ci right 1.286200e-04	k: 97	n:920000
Cons ci ratio: 1.659208e-03	ci left: 8.577861e-01	ci right 8.592116e-01	k: 789820	n:920000
KS ci ratio: 3.959585e-01	ci left: 8.550131e-05	ci right 1.286200e-04	k: 97	n:920000
TEX15   920000 perm   563 sec   (1635 perm/sec)   p_kst 1.054348e-04   p_cons 8.585000e-01   p_joint 1.054348e-04

Joint ci ratio: 3.919787e-01	ci left: 8.651943e-05	ci right 1.295995e-04	k: 99	n:930000
Cons ci ratio: 1.650300e-03	ci left: 8.577846e-01	ci right 8.592024e-01	k: 798400	n:930000
KS ci ratio: 3.919787e-01	ci left: 8.651943e-05	ci right 1.295995e-04	k: 99	n:930000
TEX15   930000 perm   573 sec   (1624 perm/sec)   p_kst 1.064516e-04   p_cons 8.584946e-01   p_joint 1.064516e-04

Joint ci ratio: 2.103977e-01	ci left: 3.303239e-04	ci right 4.089787e-04	k: 346	n:940000
Cons ci ratio: 1.641167e-03	ci left: 8.578375e-01	ci right 8.592475e-01	k: 807031	n:940000
KS ci ratio: 3.900334e-01	ci left: 8.655825e-05	ci right 1.293887e-04	k: 100	n:940000
TEX15   940000 perm   583 sec   (1613 perm/sec)   p_kst 1.063830e-04   p_cons 8.585436e-01   p_joint 3.680851e-04

Joint ci ratio: 1.959586e-01	ci left: 3.798025e-04	ci right 4.632928e-04	k: 399	n:950000
Cons ci ratio: 1.632411e-03	ci left: 8.578555e-01	ci right 8.592581e-01	k: 815630	n:950000
KS ci ratio: 3.862279e-01	ci left: 8.754694e-05	ci right 1.303364e-04	k: 102	n:950000
TEX15   950000 perm   593 sec   (1603 perm/sec)   p_kst 1.073684e-04   p_cons 8.585579e-01   p_joint 4.200000e-04

Joint ci ratio: 1.940276e-01	ci left: 3.837728e-04	ci right 4.672064e-04	k: 407	n:960000
Cons ci ratio: 1.623702e-03	ci left: 8.578868e-01	ci right 8.592819e-01	k: 824242	n:960000
KS ci ratio: 3.807228e-01	ci left: 8.945876e-05	ci right 1.324036e-04	k: 105	n:960000
TEX15   960000 perm   603 sec   (1593 perm/sec)   p_kst 1.093750e-04   p_cons 8.585854e-01   p_joint 4.239583e-04

Joint ci ratio: 1.923840e-01	ci left: 3.866839e-04	ci right 4.699549e-04	k: 414	n:970000
Cons ci ratio: 1.615653e-03	ci left: 8.578389e-01	ci right 8.592270e-01	k: 832778	n:970000
KS ci ratio: 3.789396e-01	ci left: 8.946900e-05	ci right 1.321675e-04	k: 106	n:970000
TEX15   970000 perm   613 sec   (1583 perm/sec)   p_kst 1.092784e-04   p_cons 8.585340e-01   p_joint 4.268041e-04

Joint ci ratio: 1.919223e-01	ci left: 3.846808e-04	ci right 4.672983e-04	k: 416	n:980000
Cons ci ratio: 1.607148e-03	ci left: 8.578789e-01	ci right 8.592598e-01	k: 841399	n:980000
KS ci ratio: 3.789398e-01	ci left: 8.855604e-05	ci right 1.308189e-04	k: 106	n:980000
TEX15   980000 perm   623 sec   (1573 perm/sec)   p_kst 1.081633e-04   p_cons 8.585704e-01   p_joint 4.244898e-04

Joint ci ratio: 1.901070e-01	ci left: 3.884896e-04	ci right 4.710448e-04	k: 424	n:990000
Cons ci ratio: 1.598676e-03	ci left: 8.579333e-01	ci right 8.593070e-01	k: 850035	n:990000
KS ci ratio: 3.771814e-01	ci left: 8.857565e-05	ci right 1.306031e-04	k: 107	n:990000
TEX15   990000 perm   633 sec   (1563 perm/sec)   p_kst 1.080808e-04   p_cons 8.586212e-01   p_joint 4.282828e-04

Joint ci ratio: 1.885603e-01	ci left: 3.912729e-04	ci right 4.736657e-04	k: 431	n:1000000
Cons ci ratio: 1.590487e-03	ci left: 8.579636e-01	ci right 8.593303e-01	k: 858648	n:1000000
KS ci ratio: 3.703843e-01	ci left: 9.131418e-05	ci right 1.336711e-04	k: 111	n:1000000
TEX15   1000000 perm   644 sec   (1553 perm/sec)   p_kst 1.110000e-04   p_cons 8.586480e-01   p_joint 4.310000e-04

Joint ci ratio: 1.957165e-01	ci left: 3.581812e-04	ci right 4.368096e-04	k: 400	n:1010000
Cons ci ratio: 1.582545e-03	ci left: 8.579745e-01	ci right 8.593343e-01	k: 867242	n:1010000
KS ci ratio: 3.703845e-01	ci left: 9.041007e-05	ci right 1.323477e-04	k: 111	n:1010000
TEX15   1010000 perm   654 sec   (1545 perm/sec)   p_kst 1.099010e-04   p_cons 8.586554e-01   p_joint 3.960396e-04

Joint ci ratio: 3.687420e-01	ci left: 9.041304e-05	ci right 1.321212e-04	k: 112	n:1020000
Cons ci ratio: 1.574696e-03	ci left: 8.579891e-01	ci right 8.593422e-01	k: 875840	n:1020000
KS ci ratio: 3.687420e-01	ci left: 9.041304e-05	ci right 1.321212e-04	k: 112	n:1020000
TEX15   1020000 perm   664 sec   (1536 perm/sec)   p_kst 1.098039e-04   p_cons 8.586667e-01   p_joint 1.098039e-04

Joint ci ratio: 1.750900e-01	ci left: 4.438232e-04	ci right 5.299001e-04	k: 500	n:1030000
Cons ci ratio: 1.567106e-03	ci left: 8.579811e-01	ci right 8.593276e-01	k: 884415	n:1030000
KS ci ratio: 3.671211e-01	ci left: 9.041636e-05	ci right 1.318987e-04	k: 113	n:1030000
TEX15   1030000 perm   675 sec   (1527 perm/sec)   p_kst 1.097087e-04   p_cons 8.586553e-01   p_joint 4.854369e-04

Joint ci ratio: 3.671213e-01	ci left: 8.954696e-05	ci right 1.306305e-04	k: 113	n:1040000
Cons ci ratio: 1.559390e-03	ci left: 8.580098e-01	ci right 8.593497e-01	k: 893028	n:1040000
KS ci ratio: 3.671213e-01	ci left: 8.954696e-05	ci right 1.306305e-04	k: 113	n:1040000
TEX15   1040000 perm   685 sec   (1518 perm/sec)   p_kst 1.086538e-04   p_cons 8.586808e-01   p_joint 1.086538e-04

Joint ci ratio: 1.665008e-01	ci left: 4.836901e-04	ci right 5.724362e-04	k: 553	n:1050000
Cons ci ratio: 1.551732e-03	ci left: 8.580466e-01	ci right 8.593800e-01	k: 901650	n:1050000
KS ci ratio: 3.655217e-01	ci left: 8.955885e-05	ci right 1.304260e-04	k: 114	n:1050000
TEX15   1050000 perm   696 sec   (1509 perm/sec)   p_kst 1.085714e-04   p_cons 8.587143e-01   p_joint 5.266667e-04

Joint ci ratio: 1.651643e-01	ci left: 4.872653e-04	ci right 5.758784e-04	k: 562	n:1060000
Cons ci ratio: 1.544318e-03	ci left: 8.580619e-01	ci right 8.593890e-01	k: 910250	n:1060000
KS ci ratio: 3.655219e-01	ci left: 8.871395e-05	ci right 1.291956e-04	k: 114	n:1060000
TEX15   1060000 perm   706 sec   (1500 perm/sec)   p_kst 1.075472e-04   p_cons 8.587264e-01   p_joint 5.301887e-04

Joint ci ratio: 1.645808e-01	ci left: 4.862954e-04	ci right 5.743888e-04	k: 566	n:1070000
Cons ci ratio: 1.537205e-03	ci left: 8.580460e-01	ci right 8.593670e-01	k: 918817	n:1070000
KS ci ratio: 3.639430e-01	ci left: 8.873378e-05	ci right 1.290080e-04	k: 115	n:1070000
TEX15   1070000 perm   717 sec   (1492 perm/sec)   p_kst 1.074766e-04   p_cons 8.587075e-01   p_joint 5.289720e-04

Joint ci ratio: 1.637168e-01	ci left: 4.871200e-04	ci right 5.748540e-04	k: 572	n:1080000
Cons ci ratio: 1.530212e-03	ci left: 8.580268e-01	ci right 8.593417e-01	k: 927380	n:1080000
KS ci ratio: 3.608454e-01	ci left: 8.959542e-05	ci right 1.298333e-04	k: 117	n:1080000
TEX15   1080000 perm   728 sec   (1484 perm/sec)   p_kst 1.083333e-04   p_cons 8.586852e-01   p_joint 5.296296e-04

Joint ci ratio: 1.631485e-01	ci left: 4.861707e-04	ci right 5.733998e-04	k: 576	n:1090000
Cons ci ratio: 1.523354e-03	ci left: 8.580015e-01	ci right 8.593104e-01	k: 935936	n:1090000
KS ci ratio: 3.608456e-01	ci left: 8.877343e-05	ci right 1.286421e-04	k: 117	n:1090000
TEX15   1090000 perm   739 sec   (1475 perm/sec)   p_kst 1.073394e-04   p_cons 8.586569e-01   p_joint 5.284404e-04

Joint ci ratio: 1.678727e-01	ci left: 4.538641e-04	ci right 5.378933e-04	k: 544	n:1100000
Cons ci ratio: 1.516361e-03	ci left: 8.580130e-01	ci right 8.593160e-01	k: 944532	n:1100000
KS ci ratio: 3.534346e-01	ci left: 9.210412e-05	ci right 1.324242e-04	k: 122	n:1100000
TEX15   1100000 perm   751 sec   (1465 perm/sec)   p_kst 1.109091e-04   p_cons 8.586655e-01   p_joint 4.945455e-04

Joint ci ratio: 1.672601e-01	ci left: 4.532277e-04	ci right 5.368020e-04	k: 548	n:1110000
Cons ci ratio: 1.509322e-03	ci left: 8.580470e-01	ci right 8.593439e-01	k: 953153	n:1110000
KS ci ratio: 3.520066e-01	ci left: 9.209544e-05	ci right 1.322116e-04	k: 123	n:1110000
TEX15   1110000 perm   762 sec   (1457 perm/sec)   p_kst 1.108108e-04   p_cons 8.586964e-01   p_joint 4.936937e-04

Joint ci ratio: 1.665036e-01	ci left: 4.534589e-04	ci right 5.366597e-04	k: 553	n:1120000
Cons ci ratio: 1.502519e-03	ci left: 8.580580e-01	ci right 8.593491e-01	k: 961749	n:1120000
KS ci ratio: 3.492016e-01	ci left: 9.290163e-05	ci right 1.329735e-04	k: 125	n:1120000
TEX15   1120000 perm   773 sec   (1449 perm/sec)   p_kst 1.116071e-04   p_cons 8.587045e-01   p_joint 4.937500e-04

Joint ci ratio: 1.657572e-01	ci left: 4.536868e-04	ci right 5.365191e-04	k: 558	n:1130000
Cons ci ratio: 1.495687e-03	ci left: 8.580883e-01	ci right 8.593736e-01	k: 970367	n:1130000
KS ci ratio: 3.478241e-01	ci left: 9.288699e-05	ci right 1.327588e-04	k: 126	n:1130000
TEX15   1130000 perm   784 sec   (1442 perm/sec)   p_kst 1.115044e-04   p_cons 8.587319e-01   p_joint 4.938053e-04

Joint ci ratio: 1.650209e-01	ci left: 4.539115e-04	ci right 5.363801e-04	k: 563	n:1140000
Cons ci ratio: 1.489276e-03	ci left: 8.580645e-01	ci right 8.593442e-01	k: 978924	n:1140000
KS ci ratio: 3.451171e-01	ci left: 9.367393e-05	ci right 1.335007e-04	k: 128	n:1140000
TEX15   1140000 perm   795 sec   (1434 perm/sec)   p_kst 1.122807e-04   p_cons 8.587053e-01   p_joint 4.938596e-04

Joint ci ratio: 1.645839e-01	ci left: 4.524655e-04	ci right 5.344322e-04	k: 566	n:1150000
Cons ci ratio: 1.637958e-03	ci left: 8.321054e-01	ci right 8.334703e-01	k: 957707	n:1150000
KS ci ratio: 3.437872e-01	ci left: 9.365372e-05	ci right 1.332843e-04	k: 129	n:1150000
TEX15   1150000 perm   806 sec   (1427 perm/sec)   p_kst 1.121739e-04   p_cons 8.327887e-01   p_joint 4.921739e-04

Joint ci ratio: 1.671097e-01	ci left: 4.345177e-04	ci right 5.145626e-04	k: 549	n:1160000
Cons ci ratio: 1.630837e-03	ci left: 8.321162e-01	ci right 8.334752e-01	k: 966044	n:1160000
KS ci ratio: 3.437873e-01	ci left: 9.284635e-05	ci right 1.321353e-04	k: 129	n:1160000
TEX15   1160000 perm   817 sec   (1420 perm/sec)   p_kst 1.112069e-04   p_cons 8.327966e-01   p_joint 4.732759e-04

Joint ci ratio: 3.411728e-01	ci left: 9.361519e-05	ci right 1.328618e-04	k: 131	n:1170000
Cons ci ratio: 1.623479e-03	ci left: 8.321834e-01	ci right 8.335363e-01	k: 974447	n:1170000
KS ci ratio: 3.411728e-01	ci left: 9.361519e-05	ci right 1.328618e-04	k: 131	n:1170000
TEX15   1170000 perm   828 sec   (1413 perm/sec)   p_kst 1.119658e-04   p_cons 8.328607e-01   p_joint 1.119658e-04

Joint ci ratio: 3.411730e-01	ci left: 9.282184e-05	ci right 1.317359e-04	k: 131	n:1180000
Cons ci ratio: 1.616307e-03	ci left: 8.322341e-01	ci right 8.335812e-01	k: 982832	n:1180000
KS ci ratio: 3.411730e-01	ci left: 9.282184e-05	ci right 1.317359e-04	k: 131	n:1180000
TEX15   1180000 perm   839 sec   (1406 perm/sec)   p_kst 1.110169e-04   p_cons 8.329085e-01   p_joint 1.110169e-04

Joint ci ratio: 3.411731e-01	ci left: 9.204182e-05	ci right 1.306289e-04	k: 131	n:1190000
Cons ci ratio: 1.609118e-03	ci left: 8.323034e-01	ci right 8.336446e-01	k: 991240	n:1190000
KS ci ratio: 3.411731e-01	ci left: 9.204182e-05	ci right 1.306289e-04	k: 131	n:1190000
TEX15   1190000 perm   851 sec   (1398 perm/sec)   p_kst 1.100840e-04   p_cons 8.329748e-01   p_joint 1.100840e-04

Joint ci ratio: 3.398881e-01	ci left: 9.203688e-05	ci right 1.304446e-04	k: 132	n:1200000
Cons ci ratio: 1.602734e-03	ci left: 8.322480e-01	ci right 8.335837e-01	k: 999500	n:1200000
KS ci ratio: 3.398881e-01	ci left: 9.203688e-05	ci right 1.304446e-04	k: 132	n:1200000
TEX15   1200000 perm   863 sec   (1390 perm/sec)   p_kst 1.100000e-04   p_cons 8.329167e-01   p_joint 1.100000e-04

Joint ci ratio: 3.373609e-01	ci left: 9.278861e-05	ci right 1.311595e-04	k: 134	n:1210000
Cons ci ratio: 1.595956e-03	ci left: 8.322755e-01	ci right 8.336056e-01	k: 1007859	n:1210000
KS ci ratio: 3.373609e-01	ci left: 9.278861e-05	ci right 1.311595e-04	k: 134	n:1210000
TEX15   1210000 perm   875 sec   (1383 perm/sec)   p_kst 1.107438e-04   p_cons 8.329413e-01   p_joint 1.107438e-04

Joint ci ratio: 3.373611e-01	ci left: 9.202804e-05	ci right 1.300844e-04	k: 134	n:1220000
Cons ci ratio: 1.589521e-03	ci left: 8.322573e-01	ci right 8.335821e-01	k: 1016163	n:1220000
KS ci ratio: 3.373611e-01	ci left: 9.202804e-05	ci right 1.300844e-04	k: 134	n:1220000
TEX15   1220000 perm   887 sec   (1375 perm/sec)   p_kst 1.098361e-04   p_cons 8.329205e-01   p_joint 1.098361e-04

Joint ci ratio: 3.361185e-01	ci left: 9.202411e-05	ci right 1.299083e-04	k: 135	n:1230000
Cons ci ratio: 1.582969e-03	ci left: 8.322737e-01	ci right 8.335930e-01	k: 1024509	n:1230000
KS ci ratio: 3.361185e-01	ci left: 9.202411e-05	ci right 1.299083e-04	k: 135	n:1230000
TEX15   1230000 perm   899 sec   (1368 perm/sec)   p_kst 1.097561e-04   p_cons 8.329341e-01   p_joint 1.097561e-04

Joint ci ratio: 3.336739e-01	ci left: 9.275928e-05	ci right 1.306087e-04	k: 137	n:1240000
Cons ci ratio: 1.576867e-03	ci left: 8.322244e-01	ci right 8.335385e-01	k: 1032774	n:1240000
KS ci ratio: 3.336739e-01	ci left: 9.275928e-05	ci right 1.306087e-04	k: 137	n:1240000
TEX15   1240000 perm   911 sec   (1361 perm/sec)   p_kst 1.104839e-04   p_cons 8.328823e-01   p_joint 1.104839e-04

Joint ci ratio: 3.336740e-01	ci left: 9.201720e-05	ci right 1.295638e-04	k: 137	n:1250000
Cons ci ratio: 1.570451e-03	ci left: 8.322440e-01	ci right 8.335528e-01	k: 1041124	n:1250000
KS ci ratio: 3.336740e-01	ci left: 9.201720e-05	ci right 1.295638e-04	k: 137	n:1250000
TEX15   1250000 perm   923 sec   (1354 perm/sec)   p_kst 1.096000e-04   p_cons 8.328992e-01   p_joint 1.096000e-04

Joint ci ratio: 3.312819e-01	ci left: 9.274172e-05	ci right 1.302549e-04	k: 139	n:1260000
Cons ci ratio: 1.564211e-03	ci left: 8.322458e-01	ci right 8.335494e-01	k: 1049452	n:1260000
KS ci ratio: 3.312819e-01	ci left: 9.274172e-05	ci right 1.302549e-04	k: 139	n:1260000
TEX15   1260000 perm   936 sec   (1346 perm/sec)   p_kst 1.103175e-04   p_cons 8.328984e-01   p_joint 1.103175e-04

Joint ci ratio: 3.277883e-01	ci left: 9.417829e-05	ci right 1.317861e-04	k: 142	n:1270000
Cons ci ratio: 1.558080e-03	ci left: 8.322413e-01	ci right 8.335398e-01	k: 1057772	n:1270000
KS ci ratio: 3.277883e-01	ci left: 9.417829e-05	ci right 1.317861e-04	k: 142	n:1270000
TEX15   1270000 perm   948 sec   (1339 perm/sec)   p_kst 1.118110e-04   p_cons 8.328913e-01   p_joint 1.118110e-04

Joint ci ratio: 3.255197e-01	ci left: 9.487691e-05	ci right 1.324467e-04	k: 144	n:1280000
Cons ci ratio: 1.551995e-03	ci left: 8.322416e-01	ci right 8.335350e-01	k: 1066098	n:1280000
KS ci ratio: 3.255197e-01	ci left: 9.487691e-05	ci right 1.324467e-04	k: 144	n:1280000
TEX15   1280000 perm   961 sec   (1332 perm/sec)   p_kst 1.125000e-04   p_cons 8.328891e-01   p_joint 1.125000e-04

Joint ci ratio: 1.537162e-01	ci left: 4.651426e-04	ci right 5.433300e-04	k: 649	n:1290000
Cons ci ratio: 1.545933e-03	ci left: 8.322504e-01	ci right 8.335388e-01	k: 1074435	n:1290000
KS ci ratio: 3.222034e-01	ci left: 9.627799e-05	ci right 1.339340e-04	k: 147	n:1290000
TEX15   1290000 perm   973 sec   (1326 perm/sec)   p_kst 1.139535e-04   p_cons 8.328953e-01   p_joint 5.031008e-04

Joint ci ratio: 1.533629e-01	ci left: 4.637836e-04	ci right 5.415468e-04	k: 652	n:1300000
Cons ci ratio: 1.540141e-03	ci left: 8.322229e-01	ci right 8.335064e-01	k: 1082725	n:1300000
KS ci ratio: 3.222035e-01	ci left: 9.553738e-05	ci right 1.329037e-04	k: 147	n:1300000
TEX15   1300000 perm   985 sec   (1320 perm/sec)   p_kst 1.130769e-04   p_cons 8.328654e-01   p_joint 5.015385e-04

Joint ci ratio: 1.532458e-01	ci left: 4.609773e-04	ci right 5.382056e-04	k: 653	n:1310000
Cons ci ratio: 1.534351e-03	ci left: 8.322073e-01	ci right 8.334859e-01	k: 1091030	n:1310000
KS ci ratio: 3.211205e-01	ci left: 9.550982e-05	ci right 1.327140e-04	k: 148	n:1310000
TEX15   1310000 perm   997 sec   (1314 perm/sec)   p_kst 1.129771e-04   p_cons 8.328473e-01   p_joint 4.984733e-04

Joint ci ratio: 1.530122e-01	ci left: 4.589421e-04	ci right 5.357015e-04	k: 655	n:1320000
Cons ci ratio: 1.528451e-03	ci left: 8.322238e-01	ci right 8.334975e-01	k: 1099377	n:1320000
KS ci ratio: 3.200484e-01	ci left: 9.548288e-05	ci right 1.325269e-04	k: 149	n:1320000
TEX15   1320000 perm   1009 sec   (1308 perm/sec)   p_kst 1.128788e-04   p_cons 8.328614e-01   p_joint 4.962121e-04

Joint ci ratio: 3.189868e-01	ci left: 9.545655e-05	ci right 1.323424e-04	k: 150	n:1330000
Cons ci ratio: 1.522775e-03	ci left: 8.322114e-01	ci right 8.334804e-01	k: 1107686	n:1330000
KS ci ratio: 3.189868e-01	ci left: 9.545655e-05	ci right 1.323424e-04	k: 150	n:1330000
TEX15   1330000 perm   1022 sec   (1302 perm/sec)   p_kst 1.127820e-04   p_cons 8.328466e-01   p_joint 1.127820e-04

Joint ci ratio: 3.179358e-01	ci left: 9.543081e-05	ci right 1.321605e-04	k: 151	n:1340000
Cons ci ratio: 1.517002e-03	ci left: 8.322284e-01	ci right 8.334926e-01	k: 1116034	n:1340000
KS ci ratio: 3.179358e-01	ci left: 9.543081e-05	ci right 1.321605e-04	k: 151	n:1340000
TEX15   1340000 perm   1034 sec   (1296 perm/sec)   p_kst 1.126866e-04   p_cons 8.328612e-01   p_joint 1.126866e-04

Joint ci ratio: 3.168951e-01	ci left: 9.540565e-05	ci right 1.319811e-04	k: 152	n:1350000
Cons ci ratio: 1.511376e-03	ci left: 8.322303e-01	ci right 8.334898e-01	k: 1124362	n:1350000
KS ci ratio: 3.168951e-01	ci left: 9.540565e-05	ci right 1.319811e-04	k: 152	n:1350000
TEX15   1350000 perm   1046 sec   (1290 perm/sec)   p_kst 1.125926e-04   p_cons 8.328607e-01   p_joint 1.125926e-04

Joint ci ratio: 3.158646e-01	ci left: 9.538106e-05	ci right 1.318042e-04	k: 153	n:1360000
Cons ci ratio: 1.505831e-03	ci left: 8.322285e-01	ci right 8.334833e-01	k: 1132685	n:1360000
KS ci ratio: 3.158646e-01	ci left: 9.538106e-05	ci right 1.318042e-04	k: 153	n:1360000
TEX15   1360000 perm   1059 sec   (1284 perm/sec)   p_kst 1.125000e-04   p_cons 8.328566e-01   p_joint 1.125000e-04

Joint ci ratio: 3.148441e-01	ci left: 9.535701e-05	ci right 1.316296e-04	k: 154	n:1370000
Cons ci ratio: 1.500336e-03	ci left: 8.322289e-01	ci right 8.334792e-01	k: 1141011	n:1370000
KS ci ratio: 3.148441e-01	ci left: 9.535701e-05	ci right 1.316296e-04	k: 154	n:1370000
TEX15   1370000 perm   1071 sec   (1279 perm/sec)   p_kst 1.124088e-04   p_cons 8.328547e-01   p_joint 1.124088e-04

Joint ci ratio: 3.128321e-01	ci left: 9.600116e-05	ci right 1.322388e-04	k: 156	n:1380000
Cons ci ratio: 1.495071e-03	ci left: 8.321974e-01	ci right 8.334432e-01	k: 1149293	n:1380000
KS ci ratio: 3.128321e-01	ci left: 9.600116e-05	ci right 1.322388e-04	k: 156	n:1380000
TEX15   1380000 perm   1084 sec   (1273 perm/sec)   p_kst 1.130435e-04   p_cons 8.328210e-01   p_joint 1.130435e-04

Joint ci ratio: 3.108583e-01	ci left: 9.663677e-05	ci right 1.328385e-04	k: 158	n:1390000
Cons ci ratio: 1.489988e-03	ci left: 8.321426e-01	ci right 8.333841e-01	k: 1157542	n:1390000
KS ci ratio: 3.108583e-01	ci left: 9.663677e-05	ci right 1.328385e-04	k: 158	n:1390000
TEX15   1390000 perm   1097 sec   (1267 perm/sec)   p_kst 1.136691e-04   p_cons 8.327640e-01   p_joint 1.136691e-04

Joint ci ratio: 3.089214e-01	ci left: 9.726401e-05	ci right 1.334290e-04	k: 160	n:1400000
Cons ci ratio: 1.484309e-03	ci left: 8.322102e-01	ci right 8.334470e-01	k: 1165961	n:1400000
KS ci ratio: 3.089214e-01	ci left: 9.726401e-05	ci right 1.334290e-04	k: 160	n:1400000
TEX15   1400000 perm   1110 sec   (1261 perm/sec)   p_kst 1.142857e-04   p_cons 8.328293e-01   p_joint 1.142857e-04

Joint ci ratio: 3.089215e-01	ci left: 9.657419e-05	ci right 1.324827e-04	k: 160	n:1410000
Cons ci ratio: 1.479083e-03	ci left: 8.322036e-01	ci right 8.334361e-01	k: 1174277	n:1410000
KS ci ratio: 3.089215e-01	ci left: 9.657419e-05	ci right 1.324827e-04	k: 160	n:1410000
TEX15   1410000 perm   1123 sec   (1256 perm/sec)   p_kst 1.134752e-04   p_cons 8.328206e-01   p_joint 1.134752e-04

Joint ci ratio: 3.089217e-01	ci left: 9.589408e-05	ci right 1.315497e-04	k: 160	n:1420000
Cons ci ratio: 1.473784e-03	ci left: 8.322212e-01	ci right 8.334493e-01	k: 1182627	n:1420000
KS ci ratio: 3.089217e-01	ci left: 9.589408e-05	ci right 1.315497e-04	k: 160	n:1420000
TEX15   1420000 perm   1136 sec   (1250 perm/sec)   p_kst 1.126761e-04   p_cons 8.328359e-01   p_joint 1.126761e-04

Joint ci ratio: 3.089218e-01	ci left: 9.522349e-05	ci right 1.306298e-04	k: 160	n:1430000
Cons ci ratio: 1.468863e-03	ci left: 8.321776e-01	ci right 8.334015e-01	k: 1190890	n:1430000
KS ci ratio: 3.089218e-01	ci left: 9.522349e-05	ci right 1.306298e-04	k: 160	n:1430000
TEX15   1430000 perm   1149 sec   (1245 perm/sec)   p_kst 1.118881e-04   p_cons 8.327902e-01   p_joint 1.118881e-04

Joint ci ratio: 3.042334e-01	ci left: 9.776740e-05	ci right 1.334611e-04	k: 165	n:1440000
Cons ci ratio: 1.463524e-03	ci left: 8.322236e-01	ci right 8.334431e-01	k: 1199281	n:1440000
KS ci ratio: 3.042334e-01	ci left: 9.776740e-05	ci right 1.334611e-04	k: 165	n:1440000
TEX15   1440000 perm   1163 sec   (1239 perm/sec)   p_kst 1.145833e-04   p_cons 8.328340e-01   p_joint 1.145833e-04

Joint ci ratio: 3.033211e-01	ci left: 9.773024e-05	ci right 1.332827e-04	k: 166	n:1450000
Cons ci ratio: 1.458506e-03	ci left: 8.322186e-01	ci right 8.334339e-01	k: 1207599	n:1450000
KS ci ratio: 3.033211e-01	ci left: 9.773024e-05	ci right 1.332827e-04	k: 166	n:1450000
TEX15   1450000 perm   1175 sec   (1234 perm/sec)   p_kst 1.144828e-04   p_cons 8.328269e-01   p_joint 1.144828e-04

Joint ci ratio: 3.024171e-01	ci left: 9.769374e-05	ci right 1.331067e-04	k: 167	n:1460000
Cons ci ratio: 1.453396e-03	ci left: 8.322410e-01	ci right 8.334522e-01	k: 1215957	n:1460000
KS ci ratio: 3.024171e-01	ci left: 9.769374e-05	ci right 1.331067e-04	k: 167	n:1460000
TEX15   1460000 perm   1189 sec   (1228 perm/sec)   p_kst 1.143836e-04   p_cons 8.328473e-01   p_joint 1.143836e-04

Joint ci ratio: 3.015210e-01	ci left: 9.765790e-05	ci right 1.329328e-04	k: 168	n:1470000
Cons ci ratio: 1.448198e-03	ci left: 8.322905e-01	ci right 8.334973e-01	k: 1224355	n:1470000
KS ci ratio: 3.015210e-01	ci left: 9.765790e-05	ci right 1.329328e-04	k: 168	n:1470000
TEX15   1470000 perm   1202 sec   (1223 perm/sec)   p_kst 1.142857e-04   p_cons 8.328946e-01   p_joint 1.142857e-04

Joint ci ratio: 3.006329e-01	ci left: 9.762269e-05	ci right 1.327612e-04	k: 169	n:1480000
Cons ci ratio: 1.443181e-03	ci left: 8.323149e-01	ci right 8.335176e-01	k: 1232717	n:1480000
KS ci ratio: 3.006329e-01	ci left: 9.762269e-05	ci right 1.327612e-04	k: 169	n:1480000
TEX15   1480000 perm   1215 sec   (1218 perm/sec)   p_kst 1.141892e-04   p_cons 8.329169e-01   p_joint 1.141892e-04

Joint ci ratio: 3.006330e-01	ci left: 9.696750e-05	ci right 1.318702e-04	k: 169	n:1490000
Cons ci ratio: 1.438518e-03	ci left: 8.322805e-01	ci right 8.334793e-01	k: 1240992	n:1490000
KS ci ratio: 3.006330e-01	ci left: 9.696750e-05	ci right 1.318702e-04	k: 169	n:1490000
TEX15   1490000 perm   1229 sec   (1212 perm/sec)   p_kst 1.134228e-04   p_cons 8.328805e-01   p_joint 1.134228e-04

Joint ci ratio: 2.971571e-01	ci left: 9.878780e-05	ci right 1.338571e-04	k: 173	n:1500000
Cons ci ratio: 1.433756e-03	ci left: 8.322746e-01	ci right 8.334694e-01	k: 1249309	n:1500000
KS ci ratio: 2.971571e-01	ci left: 9.878780e-05	ci right 1.338571e-04	k: 173	n:1500000
TEX15   1500000 perm   1243 sec   (1207 perm/sec)   p_kst 1.153333e-04   p_cons 8.328727e-01   p_joint 1.153333e-04

Joint ci ratio: 2.971572e-01	ci left: 9.813357e-05	ci right 1.329706e-04	k: 173	n:1510000
Cons ci ratio: 1.428989e-03	ci left: 8.322788e-01	ci right 8.334696e-01	k: 1257641	n:1510000
KS ci ratio: 2.971572e-01	ci left: 9.813357e-05	ci right 1.329706e-04	k: 173	n:1510000
TEX15   1510000 perm   1257 sec   (1201 perm/sec)   p_kst 1.145695e-04   p_cons 8.328748e-01   p_joint 1.145695e-04

Joint ci ratio: 2.954639e-01	ci left: 9.870595e-05	ci right 1.335091e-04	k: 175	n:1520000
Cons ci ratio: 1.424293e-03	ci left: 8.322783e-01	ci right 8.334652e-01	k: 1265966	n:1520000
KS ci ratio: 2.954639e-01	ci left: 9.870595e-05	ci right 1.335091e-04	k: 175	n:1520000
TEX15   1520000 perm   1271 sec   (1195 perm/sec)   p_kst 1.151316e-04   p_cons 8.328724e-01   p_joint 1.151316e-04

Joint ci ratio: 2.946281e-01	ci left: 9.866604e-05	ci right 1.333383e-04	k: 176	n:1530000
Cons ci ratio: 1.419577e-03	ci left: 8.322909e-01	ci right 8.334739e-01	k: 1274311	n:1530000
KS ci ratio: 2.946281e-01	ci left: 9.866604e-05	ci right 1.333383e-04	k: 176	n:1530000
TEX15   1530000 perm   1286 sec   (1190 perm/sec)   p_kst 1.150327e-04   p_cons 8.328830e-01   p_joint 1.150327e-04

Joint ci ratio: 2.929774e-01	ci left: 9.922835e-05	ci right 1.338666e-04	k: 178	n:1540000
Cons ci ratio: 1.415049e-03	ci left: 8.322754e-01	ci right 8.334545e-01	k: 1282613	n:1540000
KS ci ratio: 2.929774e-01	ci left: 9.922835e-05	ci right 1.338666e-04	k: 178	n:1540000
TEX15   1540000 perm   1300 sec   (1184 perm/sec)   p_kst 1.155844e-04   p_cons 8.328656e-01   p_joint 1.155844e-04

Joint ci ratio: 2.897575e-01	ci left: 1.009802e-04	ci right 1.357716e-04	k: 182	n:1550000
Cons ci ratio: 1.410603e-03	ci left: 8.322523e-01	ci right 8.334277e-01	k: 1290903	n:1550000
KS ci ratio: 2.897575e-01	ci left: 1.009802e-04	ci right 1.357716e-04	k: 182	n:1550000
TEX15   1550000 perm   1315 sec   (1179 perm/sec)   p_kst 1.174194e-04   p_cons 8.328406e-01   p_joint 1.174194e-04

Joint ci ratio: 2.874111e-01	ci left: 1.021168e-04	ci right 1.369632e-04	k: 185	n:1560000
Cons ci ratio: 1.406121e-03	ci left: 8.322450e-01	ci right 8.334166e-01	k: 1299217	n:1560000
KS ci ratio: 2.874111e-01	ci left: 1.021168e-04	ci right 1.369632e-04	k: 185	n:1560000
TEX15   1560000 perm   1329 sec   (1174 perm/sec)   p_kst 1.185897e-04   p_cons 8.328314e-01   p_joint 1.185897e-04

Joint ci ratio: 2.851208e-01	ci left: 1.032401e-04	ci right 1.381384e-04	k: 188	n:1570000
Cons ci ratio: 1.401660e-03	ci left: 8.322422e-01	ci right 8.334101e-01	k: 1307538	n:1570000
KS ci ratio: 2.851208e-01	ci left: 1.032401e-04	ci right 1.381384e-04	k: 188	n:1570000
TEX15   1570000 perm   1344 sec   (1169 perm/sec)   p_kst 1.197452e-04   p_cons 8.328268e-01   p_joint 1.197452e-04

Joint ci ratio: 2.836240e-01	ci left: 1.037622e-04	ci right 1.386200e-04	k: 190	n:1580000
Cons ci ratio: 1.397316e-03	ci left: 8.322242e-01	ci right 8.333885e-01	k: 1315835	n:1580000
KS ci ratio: 2.836240e-01	ci left: 1.037622e-04	ci right 1.386200e-04	k: 190	n:1580000
TEX15   1580000 perm   1358 sec   (1163 perm/sec)   p_kst 1.202532e-04   p_cons 8.328070e-01   p_joint 1.202532e-04

Joint ci ratio: 2.836241e-01	ci left: 1.031096e-04	ci right 1.377482e-04	k: 190	n:1590000
Cons ci ratio: 1.392730e-03	ci left: 8.322632e-01	ci right 8.334237e-01	k: 1324222	n:1590000
KS ci ratio: 2.836241e-01	ci left: 1.031096e-04	ci right 1.377482e-04	k: 190	n:1590000
TEX15   1590000 perm   1373 sec   (1158 perm/sec)   p_kst 1.194969e-04   p_cons 8.328440e-01   p_joint 1.194969e-04

Joint ci ratio: 2.821507e-01	ci left: 1.036265e-04	ci right 1.382257e-04	k: 192	n:1600000
Cons ci ratio: 1.388363e-03	ci left: 8.322666e-01	ci right 8.334235e-01	k: 1332553	n:1600000
KS ci ratio: 2.821507e-01	ci left: 1.036265e-04	ci right 1.382257e-04	k: 192	n:1600000
TEX15   1600000 perm   1387 sec   (1153 perm/sec)   p_kst 1.200000e-04   p_cons 8.328456e-01   p_joint 1.200000e-04

Joint ci ratio: 2.821508e-01	ci left: 1.029829e-04	ci right 1.373672e-04	k: 192	n:1610000
Cons ci ratio: 1.384046e-03	ci left: 8.322681e-01	ci right 8.334214e-01	k: 1340881	n:1610000
KS ci ratio: 2.821508e-01	ci left: 1.029829e-04	ci right 1.373672e-04	k: 192	n:1610000
TEX15   1610000 perm   1402 sec   (1148 perm/sec)   p_kst 1.192547e-04   p_cons 8.328453e-01   p_joint 1.192547e-04

Joint ci ratio: 2.814227e-01	ci left: 1.029208e-04	ci right 1.371800e-04	k: 193	n:1620000
Cons ci ratio: 1.379435e-03	ci left: 8.323370e-01	ci right 8.334865e-01	k: 1349318	n:1620000
KS ci ratio: 2.814227e-01	ci left: 1.029208e-04	ci right 1.371800e-04	k: 193	n:1620000
TEX15   1620000 perm   1417 sec   (1143 perm/sec)   p_kst 1.191358e-04   p_cons 8.329123e-01   p_joint 1.191358e-04

Joint ci ratio: 2.814228e-01	ci left: 1.022894e-04	ci right 1.363384e-04	k: 193	n:1630000
Cons ci ratio: 1.375086e-03	ci left: 8.323614e-01	ci right 8.335074e-01	k: 1357684	n:1630000
KS ci ratio: 2.814228e-01	ci left: 1.022894e-04	ci right 1.363384e-04	k: 193	n:1630000
TEX15   1630000 perm   1432 sec   (1138 perm/sec)   p_kst 1.184049e-04   p_cons 8.329350e-01   p_joint 1.184049e-04

Joint ci ratio: 2.807003e-01	ci left: 1.022325e-04	ci right 1.361597e-04	k: 194	n:1640000
Cons ci ratio: 1.370816e-03	ci left: 8.323776e-01	ci right 8.335200e-01	k: 1366037	n:1640000
KS ci ratio: 2.807003e-01	ci left: 1.022325e-04	ci right 1.361597e-04	k: 194	n:1640000
TEX15   1640000 perm   1447 sec   (1134 perm/sec)   p_kst 1.182927e-04   p_cons 8.329494e-01   p_joint 1.182927e-04

Joint ci ratio: 2.799833e-01	ci left: 1.021764e-04	ci right 1.359831e-04	k: 195	n:1650000
Cons ci ratio: 1.366699e-03	ci left: 8.323705e-01	ci right 8.335095e-01	k: 1374352	n:1650000
KS ci ratio: 2.799833e-01	ci left: 1.021764e-04	ci right 1.359831e-04	k: 195	n:1650000
TEX15   1650000 perm   1462 sec   (1129 perm/sec)   p_kst 1.181818e-04   p_cons 8.329406e-01   p_joint 1.181818e-04

Joint ci ratio: 2.792718e-01	ci left: 1.021210e-04	ci right 1.358084e-04	k: 196	n:1660000
Cons ci ratio: 1.362568e-03	ci left: 8.323738e-01	ci right 8.335093e-01	k: 1382684	n:1660000
KS ci ratio: 2.792718e-01	ci left: 1.021210e-04	ci right 1.358084e-04	k: 196	n:1660000
TEX15   1660000 perm   1477 sec   (1124 perm/sec)   p_kst 1.180723e-04   p_cons 8.329422e-01   p_joint 1.180723e-04

Joint ci ratio: 2.778648e-01	ci left: 1.026235e-04	ci right 1.362762e-04	k: 198	n:1670000
Cons ci ratio: 1.358484e-03	ci left: 8.323753e-01	ci right 8.335074e-01	k: 1391013	n:1670000
KS ci ratio: 2.778648e-01	ci left: 1.026235e-04	ci right 1.362762e-04	k: 198	n:1670000
TEX15   1670000 perm   1492 sec   (1120 perm/sec)   p_kst 1.185629e-04   p_cons 8.329419e-01   p_joint 1.185629e-04

Joint ci ratio: 2.771693e-01	ci left: 1.025664e-04	ci right 1.361016e-04	k: 199	n:1680000
Cons ci ratio: 1.354308e-03	ci left: 8.324029e-01	ci right 8.335316e-01	k: 1399386	n:1680000
KS ci ratio: 2.771693e-01	ci left: 1.025664e-04	ci right 1.361016e-04	k: 199	n:1680000
TEX15   1680000 perm   1507 sec   (1115 perm/sec)   p_kst 1.184524e-04   p_cons 8.329679e-01   p_joint 1.184524e-04

Joint ci ratio: 2.757937e-01	ci left: 1.030609e-04	ci right 1.365615e-04	k: 201	n:1690000
Cons ci ratio: 1.350295e-03	ci left: 8.324048e-01	ci right 8.335301e-01	k: 1407716	n:1690000
KS ci ratio: 2.757937e-01	ci left: 1.030609e-04	ci right 1.365615e-04	k: 201	n:1690000
TEX15   1690000 perm   1522 sec   (1110 perm/sec)   p_kst 1.189349e-04   p_cons 8.329680e-01   p_joint 1.189349e-04

Joint ci ratio: 2.744383e-01	ci left: 1.035500e-04	ci right 1.370157e-04	k: 203	n:1700000
Cons ci ratio: 1.346371e-03	ci left: 8.323955e-01	ci right 8.335175e-01	k: 1416027	n:1700000
KS ci ratio: 2.744383e-01	ci left: 1.035500e-04	ci right 1.370157e-04	k: 203	n:1700000
TEX15   1700000 perm   1537 sec   (1106 perm/sec)   p_kst 1.194118e-04   p_cons 8.329571e-01   p_joint 1.194118e-04

Joint ci ratio: 2.731028e-01	ci left: 1.040338e-04	ci right 1.374641e-04	k: 205	n:1710000
Cons ci ratio: 1.342320e-03	ci left: 8.324196e-01	ci right 8.335383e-01	k: 1424395	n:1710000
KS ci ratio: 2.731028e-01	ci left: 1.040338e-04	ci right 1.374641e-04	k: 205	n:1710000
TEX15   1710000 perm   1553 sec   (1101 perm/sec)   p_kst 1.198830e-04   p_cons 8.329795e-01   p_joint 1.198830e-04

Joint ci ratio: 2.731029e-01	ci left: 1.034289e-04	ci right 1.366649e-04	k: 205	n:1720000
Cons ci ratio: 1.338392e-03	ci left: 8.324255e-01	ci right 8.335409e-01	k: 1432732	n:1720000
KS ci ratio: 2.731029e-01	ci left: 1.034289e-04	ci right 1.366649e-04	k: 205	n:1720000
TEX15   1720000 perm   1568 sec   (1097 perm/sec)   p_kst 1.191860e-04   p_cons 8.329837e-01   p_joint 1.191860e-04

Joint ci ratio: 2.731030e-01	ci left: 1.028311e-04	ci right 1.358749e-04	k: 205	n:1730000
Cons ci ratio: 1.334467e-03	ci left: 8.324376e-01	ci right 8.335497e-01	k: 1441080	n:1730000
KS ci ratio: 2.731030e-01	ci left: 1.028311e-04	ci right 1.358749e-04	k: 205	n:1730000
TEX15   1730000 perm   1584 sec   (1092 perm/sec)   p_kst 1.184971e-04   p_cons 8.329942e-01   p_joint 1.184971e-04

Joint ci ratio: 2.717868e-01	ci left: 1.033110e-04	ci right 1.363218e-04	k: 207	n:1740000
Cons ci ratio: 1.330710e-03	ci left: 8.324220e-01	ci right 8.335310e-01	k: 1449380	n:1740000
KS ci ratio: 2.717868e-01	ci left: 1.033110e-04	ci right 1.363218e-04	k: 207	n:1740000
TEX15   1740000 perm   1599 sec   (1088 perm/sec)   p_kst 1.189655e-04   p_cons 8.329770e-01   p_joint 1.189655e-04

Joint ci ratio: 2.717869e-01	ci left: 1.027207e-04	ci right 1.355428e-04	k: 207	n:1750000
Cons ci ratio: 1.326790e-03	ci left: 8.324471e-01	ci right 8.335529e-01	k: 1457751	n:1750000
KS ci ratio: 2.717869e-01	ci left: 1.027207e-04	ci right 1.355428e-04	k: 207	n:1750000
TEX15   1750000 perm   1615 sec   (1084 perm/sec)   p_kst 1.182857e-04   p_cons 8.330006e-01   p_joint 1.182857e-04

Joint ci ratio: 2.711359e-01	ci left: 1.026665e-04	ci right 1.353794e-04	k: 208	n:1760000
Cons ci ratio: 1.322839e-03	ci left: 8.324857e-01	ci right 8.335882e-01	k: 1466146	n:1760000
KS ci ratio: 2.711359e-01	ci left: 1.026665e-04	ci right 1.353794e-04	k: 208	n:1760000
TEX15   1760000 perm   1630 sec   (1079 perm/sec)   p_kst 1.181818e-04   p_cons 8.330375e-01   p_joint 1.181818e-04

Joint ci ratio: 2.704896e-01	ci left: 1.026131e-04	ci right 1.352178e-04	k: 209	n:1770000
Cons ci ratio: 1.319189e-03	ci left: 8.324678e-01	ci right 8.335673e-01	k: 1474442	n:1770000
KS ci ratio: 2.704896e-01	ci left: 1.026131e-04	ci right 1.352178e-04	k: 209	n:1770000
TEX15   1770000 perm   1646 sec   (1075 perm/sec)   p_kst 1.180791e-04   p_cons 8.330181e-01   p_joint 1.180791e-04

Joint ci ratio: 2.704897e-01	ci left: 1.020366e-04	ci right 1.344582e-04	k: 209	n:1780000
Cons ci ratio: 1.315522e-03	ci left: 8.324603e-01	ci right 8.335566e-01	k: 1482756	n:1780000
KS ci ratio: 2.704897e-01	ci left: 1.020366e-04	ci right 1.344582e-04	k: 209	n:1780000
TEX15   1780000 perm   1662 sec   (1071 perm/sec)   p_kst 1.174157e-04   p_cons 8.330090e-01   p_joint 1.174157e-04

Joint ci ratio: 2.704898e-01	ci left: 1.014666e-04	ci right 1.337070e-04	k: 209	n:1790000
Cons ci ratio: 1.311974e-03	ci left: 8.324338e-01	ci right 8.335272e-01	k: 1491036	n:1790000
KS ci ratio: 2.704898e-01	ci left: 1.014666e-04	ci right 1.337070e-04	k: 209	n:1790000
TEX15   1790000 perm   1678 sec   (1067 perm/sec)   p_kst 1.167598e-04   p_cons 8.329810e-01   p_joint 1.167598e-04

Joint ci ratio: 2.692108e-01	ci left: 1.019388e-04	ci right 1.341503e-04	k: 211	n:1800000
Cons ci ratio: 1.308410e-03	ci left: 8.324170e-01	ci right 8.335074e-01	k: 1499333	n:1800000
KS ci ratio: 2.692108e-01	ci left: 1.019388e-04	ci right 1.341503e-04	k: 211	n:1800000
TEX15   1800000 perm   1694 sec   (1062 perm/sec)   p_kst 1.172222e-04   p_cons 8.329628e-01   p_joint 1.172222e-04

Joint ci ratio: 2.673258e-01	ci left: 1.029216e-04	ci right 1.351778e-04	k: 214	n:1810000
Cons ci ratio: 1.304816e-03	ci left: 8.324132e-01	ci right 8.335006e-01	k: 1507653	n:1810000
KS ci ratio: 2.673258e-01	ci left: 1.029216e-04	ci right 1.351778e-04	k: 214	n:1810000
TEX15   1810000 perm   1710 sec   (1058 perm/sec)   p_kst 1.182320e-04   p_cons 8.329575e-01   p_joint 1.182320e-04

Joint ci ratio: 2.667063e-01	ci left: 1.028688e-04	ci right 1.350212e-04	k: 215	n:1820000
Cons ci ratio: 1.301340e-03	ci left: 8.323902e-01	ci right 8.334747e-01	k: 1515938	n:1820000
KS ci ratio: 2.667063e-01	ci left: 1.028688e-04	ci right 1.350212e-04	k: 215	n:1820000
TEX15   1820000 perm   1727 sec   (1054 perm/sec)   p_kst 1.181319e-04   p_cons 8.329330e-01   p_joint 1.181319e-04

Joint ci ratio: 1.292764e-01	ci left: 4.697171e-04	ci right 5.351592e-04	k: 918	n:1830000
Cons ci ratio: 1.297908e-03	ci left: 8.323642e-01	ci right 8.334457e-01	k: 1524217	n:1830000
KS ci ratio: 2.654800e-01	ci left: 1.033267e-04	ci right 1.354490e-04	k: 217	n:1830000
TEX15   1830000 perm   1743 sec   (1050 perm/sec)   p_kst 1.185792e-04   p_cons 8.329055e-01   p_joint 5.016393e-04

Joint ci ratio: 1.289960e-01	ci left: 4.692679e-04	ci right 5.344948e-04	k: 922	n:1840000
Cons ci ratio: 1.294296e-03	ci left: 8.323830e-01	ci right 8.334616e-01	k: 1532578	n:1840000
KS ci ratio: 2.648732e-01	ci left: 1.032725e-04	ci right 1.352924e-04	k: 218	n:1840000
TEX15   1840000 perm   1759 sec   (1046 perm/sec)   p_kst 1.184783e-04   p_cons 8.329228e-01   p_joint 5.010870e-04

Joint ci ratio: 1.287174e-01	ci left: 4.688238e-04	ci right 5.338375e-04	k: 926	n:1850000
Cons ci ratio: 1.290696e-03	ci left: 8.324055e-01	ci right 8.334811e-01	k: 1540946	n:1850000
KS ci ratio: 2.648733e-01	ci left: 1.027142e-04	ci right 1.345611e-04	k: 218	n:1850000
TEX15   1850000 perm   1776 sec   (1042 perm/sec)   p_kst 1.178378e-04   p_cons 8.329438e-01   p_joint 5.005405e-04

Joint ci ratio: 1.284406e-01	ci left: 4.683846e-04	ci right 5.331871e-04	k: 930	n:1860000
Cons ci ratio: 1.287364e-03	ci left: 8.323760e-01	ci right 8.334488e-01	k: 1549218	n:1860000
KS ci ratio: 2.642706e-01	ci left: 1.026640e-04	ci right 1.344108e-04	k: 219	n:1860000
TEX15   1860000 perm   1792 sec   (1038 perm/sec)   p_kst 1.177419e-04   p_cons 8.329129e-01   p_joint 5.000000e-04

Joint ci ratio: 1.232517e-01	ci left: 5.073151e-04	ci right 5.744613e-04	k: 1010	n:1870000
Cons ci ratio: 1.283832e-03	ci left: 8.323961e-01	ci right 8.334660e-01	k: 1557582	n:1870000
KS ci ratio: 2.630775e-01	ci left: 1.031138e-04	ci right 1.348321e-04	k: 221	n:1870000
TEX15   1870000 perm   1809 sec   (1034 perm/sec)   p_kst 1.181818e-04   p_cons 8.329316e-01   p_joint 5.401070e-04

Joint ci ratio: 1.231301e-01	ci left: 5.056476e-04	ci right 5.725023e-04	k: 1012	n:1880000
Cons ci ratio: 1.280494e-03	ci left: 8.323798e-01	ci right 8.334468e-01	k: 1565878	n:1880000
KS ci ratio: 2.619003e-01	ci left: 1.035592e-04	ci right 1.352486e-04	k: 223	n:1880000
TEX15   1880000 perm   1825 sec   (1030 perm/sec)   p_kst 1.186170e-04   p_cons 8.329138e-01   p_joint 5.382979e-04

Joint ci ratio: 1.228273e-01	ci left: 5.055363e-04	ci right 5.722000e-04	k: 1017	n:1890000
Cons ci ratio: 1.277105e-03	ci left: 8.323806e-01	ci right 8.334448e-01	k: 1574206	n:1890000
KS ci ratio: 2.619004e-01	ci left: 1.030112e-04	ci right 1.345330e-04	k: 223	n:1890000
TEX15   1890000 perm   1842 sec   (1026 perm/sec)   p_kst 1.179894e-04   p_cons 8.329132e-01   p_joint 5.380952e-04

Joint ci ratio: 1.224072e-01	ci left: 5.064468e-04	ci right 5.729856e-04	k: 1024	n:1900000
Cons ci ratio: 1.273916e-03	ci left: 8.323435e-01	ci right 8.334050e-01	k: 1582462	n:1900000
KS ci ratio: 2.607389e-01	ci left: 1.034528e-04	ci right 1.349463e-04	k: 225	n:1900000
TEX15   1900000 perm   1858 sec   (1022 perm/sec)   p_kst 1.184211e-04   p_cons 8.328747e-01   p_joint 5.389474e-04

Joint ci ratio: 1.221691e-01	ci left: 5.058255e-04	ci right 5.721440e-04	k: 1028	n:1910000
Cons ci ratio: 1.270638e-03	ci left: 8.323314e-01	ci right 8.333901e-01	k: 1590765	n:1910000
KS ci ratio: 2.601640e-01	ci left: 1.034005e-04	ci right 1.347975e-04	k: 226	n:1910000
TEX15   1910000 perm   1875 sec   (1019 perm/sec)   p_kst 1.183246e-04   p_cons 8.328613e-01   p_joint 5.382199e-04

Joint ci ratio: 1.218144e-01	ci left: 5.062206e-04	ci right 5.723844e-04	k: 1034	n:1920000
Cons ci ratio: 1.267243e-03	ci left: 8.323507e-01	ci right 8.334066e-01	k: 1599128	n:1920000
KS ci ratio: 2.595929e-01	ci left: 1.033489e-04	ci right 1.346501e-04	k: 227	n:1920000
TEX15   1920000 perm   1892 sec   (1015 perm/sec)   p_kst 1.182292e-04   p_cons 8.328792e-01   p_joint 5.385417e-04

Joint ci ratio: 1.214045e-01	ci left: 5.071143e-04	ci right 5.731558e-04	k: 1041	n:1930000
Cons ci ratio: 1.264054e-03	ci left: 8.323304e-01	ci right 8.333837e-01	k: 1607415	n:1930000
KS ci ratio: 2.584617e-01	ci left: 1.037824e-04	ci right 1.350558e-04	k: 229	n:1930000
TEX15   1930000 perm   1908 sec   (1011 perm/sec)   p_kst 1.186528e-04   p_cons 8.328575e-01   p_joint 5.393782e-04

Joint ci ratio: 1.212302e-01	ci left: 5.059998e-04	ci right 5.717947e-04	k: 1044	n:1940000
Cons ci ratio: 1.260919e-03	ci left: 8.323036e-01	ci right 8.333542e-01	k: 1615689	n:1940000
KS ci ratio: 2.584618e-01	ci left: 1.032474e-04	ci right 1.343597e-04	k: 229	n:1940000
TEX15   1940000 perm   1925 sec   (1008 perm/sec)   p_kst 1.180412e-04   p_cons 8.328294e-01   p_joint 5.381443e-04

Joint ci ratio: 1.207687e-01	ci left: 5.073833e-04	ci right 5.730891e-04	k: 1052	n:1950000
Cons ci ratio: 1.257701e-03	ci left: 8.323007e-01	ci right 8.333486e-01	k: 1624009	n:1950000
KS ci ratio: 2.567923e-01	ci left: 1.041571e-04	ci right 1.353082e-04	k: 232	n:1950000
TEX15   1950000 perm   1942 sec   (1004 perm/sec)   p_kst 1.189744e-04   p_cons 8.328251e-01   p_joint 5.394872e-04

Joint ci ratio: 1.206543e-01	ci left: 5.057842e-04	ci right 5.712164e-04	k: 1054	n:1960000
Cons ci ratio: 1.254611e-03	ci left: 8.322748e-01	ci right 8.333201e-01	k: 1632284	n:1960000
KS ci ratio: 2.567924e-01	ci left: 1.036257e-04	ci right 1.346179e-04	k: 232	n:1960000
TEX15   1960000 perm   1959 sec   (1000 perm/sec)   p_kst 1.183673e-04   p_cons 8.327980e-01   p_joint 5.377551e-04

Joint ci ratio: 1.201428e-01	ci left: 5.076477e-04	ci right 5.730229e-04	k: 1063	n:1970000
Cons ci ratio: 1.251393e-03	ci left: 8.322828e-01	ci right 8.333254e-01	k: 1640625	n:1970000
KS ci ratio: 2.562431e-01	ci left: 1.035746e-04	ci right 1.344747e-04	k: 233	n:1970000
TEX15   1970000 perm   1977 sec   (997 perm/sec)   p_kst 1.182741e-04   p_cons 8.328046e-01   p_joint 5.395939e-04

Joint ci ratio: 1.199739e-01	ci left: 5.065535e-04	ci right 5.716895e-04	k: 1066	n:1980000
Cons ci ratio: 1.248182e-03	ci left: 8.322947e-01	ci right 8.333347e-01	k: 1648974	n:1980000
KS ci ratio: 2.562432e-01	ci left: 1.030515e-04	ci right 1.337955e-04	k: 233	n:1980000
TEX15   1980000 perm   1995 sec   (993 perm/sec)   p_kst 1.176768e-04   p_cons 8.328152e-01   p_joint 5.383838e-04

Joint ci ratio: 1.196380e-01	ci left: 5.069327e-04	ci right 5.719220e-04	k: 1072	n:1990000
Cons ci ratio: 1.245037e-03	ci left: 8.322969e-01	ci right 8.333343e-01	k: 1657304	n:1990000
KS ci ratio: 2.556974e-01	ci left: 1.030039e-04	ci right 1.336579e-04	k: 234	n:1990000
TEX15   1990000 perm   2012 sec   (989 perm/sec)   p_kst 1.175879e-04   p_cons 8.328161e-01   p_joint 5.386935e-04

Joint ci ratio: 1.194156e-01	ci left: 5.063383e-04	ci right 5.711222e-04	k: 1076	n:2000000
Cons ci ratio: 1.241839e-03	ci left: 8.323167e-01	ci right 8.333514e-01	k: 1665669	n:2000000
KS ci ratio: 2.546162e-01	ci left: 1.034250e-04	ci right 1.340534e-04	k: 236	n:2000000
TEX15   2000000 perm   2030 sec   (985 perm/sec)   p_kst 1.180000e-04   p_cons 8.328345e-01   p_joint 5.380000e-04

Joint ci ratio: 1.190294e-01	ci left: 5.071979e-04	ci right 5.718672e-04	k: 1083	n:2010000
Cons ci ratio: 1.238671e-03	ci left: 8.323347e-01	ci right 8.333668e-01	k: 1674031	n:2010000
KS ci ratio: 2.535486e-01	ci left: 1.038421e-04	ci right 1.344447e-04	k: 238	n:2010000
TEX15   2010000 perm   2048 sec   (982 perm/sec)   p_kst 1.184080e-04   p_cons 8.328512e-01   p_joint 5.388060e-04

Joint ci ratio: 1.186469e-01	ci left: 5.080494e-04	ci right 5.726044e-04	k: 1090	n:2020000
Cons ci ratio: 1.235565e-03	ci left: 8.323442e-01	ci right 8.333737e-01	k: 1682376	n:2020000
KS ci ratio: 2.524943e-01	ci left: 1.042554e-04	ci right 1.348319e-04	k: 240	n:2020000
TEX15   2020000 perm   2065 sec   (978 perm/sec)   p_kst 1.188119e-04   p_cons 8.328594e-01   p_joint 5.396040e-04

Joint ci ratio: 1.182680e-01	ci left: 5.088928e-04	ci right 5.733341e-04	k: 1097	n:2030000
Cons ci ratio: 1.232463e-03	ci left: 8.323580e-01	ci right 8.333849e-01	k: 1690730	n:2030000
KS ci ratio: 2.519721e-01	ci left: 1.042033e-04	ci right 1.346914e-04	k: 241	n:2030000
TEX15   2030000 perm   2083 sec   (974 perm/sec)   p_kst 1.187192e-04   p_cons 8.328719e-01   p_joint 5.403941e-04

Joint ci ratio: 1.178394e-01	ci left: 5.102040e-04	ci right 5.745609e-04	k: 1105	n:2040000
Cons ci ratio: 1.229481e-03	ci left: 8.323496e-01	ci right 8.333740e-01	k: 1699039	n:2040000
KS ci ratio: 2.514531e-01	ci left: 1.041517e-04	ci right 1.345522e-04	k: 242	n:2040000
TEX15   2040000 perm   2101 sec   (971 perm/sec)   p_kst 1.186275e-04   p_cons 8.328623e-01   p_joint 5.416667e-04

Joint ci ratio: 1.175211e-01	ci left: 5.105559e-04	ci right 5.747711e-04	k: 1111	n:2050000
Cons ci ratio: 1.226544e-03	ci left: 8.323359e-01	ci right 8.333578e-01	k: 1707337	n:2050000
KS ci ratio: 2.504246e-01	ci left: 1.045579e-04	ci right 1.349327e-04	k: 244	n:2050000
TEX15   2050000 perm   2118 sec   (968 perm/sec)   p_kst 1.190244e-04   p_cons 8.328473e-01   p_joint 5.419512e-04

Joint ci ratio: 1.172578e-01	ci left: 5.104334e-04	ci right 5.744794e-04	k: 1116	n:2060000
Cons ci ratio: 1.223486e-03	ci left: 8.323548e-01	ci right 8.333743e-01	k: 1715702	n:2060000
KS ci ratio: 2.494086e-01	ci left: 1.049604e-04	ci right 1.353092e-04	k: 246	n:2060000
TEX15   2060000 perm   2136 sec   (964 perm/sec)   p_kst 1.194175e-04   p_cons 8.328650e-01   p_joint 5.417476e-04

Joint ci ratio: 1.171007e-01	ci left: 5.093743e-04	ci right 5.731959e-04	k: 1119	n:2070000
Cons ci ratio: 1.220495e-03	ci left: 8.323635e-01	ci right 8.333805e-01	k: 1724046	n:2070000
KS ci ratio: 2.489053e-01	ci left: 1.049063e-04	ci right 1.351687e-04	k: 247	n:2070000
TEX15   2070000 perm   2154 sec   (961 perm/sec)   p_kst 1.193237e-04   p_cons 8.328725e-01   p_joint 5.405797e-04

Joint ci ratio: 1.167883e-01	ci left: 5.097256e-04	ci right 5.734091e-04	k: 1125	n:2080000
Cons ci ratio: 1.217622e-03	ci left: 8.323499e-01	ci right 8.333645e-01	k: 1732344	n:2080000
KS ci ratio: 2.484050e-01	ci left: 1.048528e-04	ci right 1.350296e-04	k: 248	n:2080000
TEX15   2080000 perm   2171 sec   (958 perm/sec)   p_kst 1.192308e-04   p_cons 8.328577e-01   p_joint 5.408654e-04

Joint ci ratio: 1.165298e-01	ci left: 5.096093e-04	ci right 5.731277e-04	k: 1130	n:2090000
Cons ci ratio: 1.214834e-03	ci left: 8.323217e-01	ci right 8.333339e-01	k: 1740611	n:2090000
KS ci ratio: 2.479077e-01	ci left: 1.047998e-04	ci right 1.348916e-04	k: 249	n:2090000
TEX15   2090000 perm   2189 sec   (955 perm/sec)   p_kst 1.191388e-04   p_cons 8.328282e-01   p_joint 5.406699e-04

Joint ci ratio: 1.049944e-01	ci left: 6.284994e-04	ci right 6.986037e-04	k: 1392	n:2100000
Cons ci ratio: 1.211928e-03	ci left: 8.323251e-01	ci right 8.333349e-01	k: 1748944	n:2100000
KS ci ratio: 2.464334e-01	ci left: 1.056408e-04	ci right 1.357662e-04	k: 252	n:2100000
TEX15   2100000 perm   2207 sec   (951 perm/sec)   p_kst 1.200000e-04   p_cons 8.328305e-01   p_joint 6.628571e-04

Joint ci ratio: 1.048441e-01	ci left: 6.273667e-04	ci right 6.972383e-04	k: 1396	n:2110000
Cons ci ratio: 1.209152e-03	ci left: 8.323034e-01	ci right 8.333108e-01	k: 1757224	n:2110000
KS ci ratio: 2.464335e-01	ci left: 1.051402e-04	ci right 1.351227e-04	k: 252	n:2110000
TEX15   2110000 perm   2225 sec   (948 perm/sec)   p_kst 1.194313e-04   p_cons 8.328076e-01   p_joint 6.616114e-04

Joint ci ratio: 1.045079e-01	ci left: 6.285416e-04	ci right 6.983058e-04	k: 1405	n:2120000
Cons ci ratio: 1.206258e-03	ci left: 8.323135e-01	ci right 8.333186e-01	k: 1765571	n:2120000
KS ci ratio: 2.459479e-01	ci left: 1.050868e-04	ci right 1.349861e-04	k: 253	n:2120000
TEX15   2120000 perm   2244 sec   (945 perm/sec)   p_kst 1.193396e-04   p_cons 8.328165e-01   p_joint 6.627358e-04

Joint ci ratio: 1.041014e-01	ci left: 6.306203e-04	ci right 7.003263e-04	k: 1416	n:2130000
Cons ci ratio: 1.203438e-03	ci left: 8.323113e-01	ci right 8.333140e-01	k: 1773892	n:2130000
KS ci ratio: 2.445081e-01	ci left: 1.059154e-04	ci right 1.358472e-04	k: 256	n:2130000
TEX15   2130000 perm   2262 sec   (942 perm/sec)   p_kst 1.201878e-04   p_cons 8.328131e-01   p_joint 6.647887e-04

Joint ci ratio: 1.038087e-01	ci left: 6.313146e-04	ci right 7.008892e-04	k: 1424	n:2140000
Cons ci ratio: 1.200551e-03	ci left: 8.323293e-01	ci right 8.333296e-01	k: 1782256	n:2140000
KS ci ratio: 2.445081e-01	ci left: 1.054204e-04	ci right 1.352124e-04	k: 256	n:2140000
TEX15   2140000 perm   2280 sec   (938 perm/sec)   p_kst 1.196262e-04   p_cons 8.328299e-01   p_joint 6.654206e-04

Joint ci ratio: 1.036997e-01	ci left: 6.297374e-04	ci right 6.990609e-04	k: 1427	n:2150000
Cons ci ratio: 1.197850e-03	ci left: 8.323084e-01	ci right 8.333065e-01	k: 1790537	n:2150000
KS ci ratio: 2.445082e-01	ci left: 1.049301e-04	ci right 1.345835e-04	k: 256	n:2150000
TEX15   2150000 perm   2299 sec   (935 perm/sec)   p_kst 1.190698e-04   p_cons 8.328079e-01   p_joint 6.637209e-04

Joint ci ratio: 1.035911e-01	ci left: 6.281748e-04	ci right 6.972494e-04	k: 1430	n:2160000
Cons ci ratio: 1.194901e-03	ci left: 8.323499e-01	ci right 8.333455e-01	k: 1798952	n:2160000
KS ci ratio: 2.440339e-01	ci left: 1.048790e-04	ci right 1.344517e-04	k: 257	n:2160000
TEX15   2160000 perm   2317 sec   (932 perm/sec)   p_kst 1.189815e-04   p_cons 8.328481e-01   p_joint 6.620370e-04

Joint ci ratio: 1.033027e-01	ci left: 6.288713e-04	ci right 6.978182e-04	k: 1438	n:2170000
Cons ci ratio: 1.192185e-03	ci left: 8.323416e-01	ci right 8.333349e-01	k: 1807260	n:2170000
KS ci ratio: 2.430935e-01	ci left: 1.052611e-04	ci right 1.348099e-04	k: 259	n:2170000
TEX15   2170000 perm   2335 sec   (929 perm/sec)   p_kst 1.193548e-04   p_cons 8.328387e-01   p_joint 6.626728e-04

Joint ci ratio: 1.030167e-01	ci left: 6.295616e-04	ci right 6.983816e-04	k: 1446	n:2180000
Cons ci ratio: 1.189313e-03	ci left: 8.323742e-01	ci right 8.333652e-01	k: 1815657	n:2180000
KS ci ratio: 2.417029e-01	ci left: 1.060708e-04	ci right 1.356510e-04	k: 262	n:2180000
TEX15   2180000 perm   2354 sec   (926 perm/sec)   p_kst 1.201835e-04   p_cons 8.328702e-01   p_joint 6.633028e-04

Joint ci ratio: 1.027330e-01	ci left: 6.302459e-04	ci right 6.989395e-04	k: 1454	n:2190000
Cons ci ratio: 1.186698e-03	ci left: 8.323513e-01	ci right 8.333401e-01	k: 1823933	n:2190000
KS ci ratio: 2.403360e-01	ci left: 1.068736e-04	ci right 1.364841e-04	k: 265	n:2190000
TEX15   2190000 perm   2373 sec   (923 perm/sec)   p_kst 1.210046e-04   p_cons 8.328461e-01   p_joint 6.639269e-04

Joint ci ratio: 1.025922e-01	ci left: 6.291526e-04	ci right 6.976274e-04	k: 1458	n:2200000
Cons ci ratio: 1.184002e-03	ci left: 8.323513e-01	ci right 8.333378e-01	k: 1832259	n:2200000
KS ci ratio: 2.403360e-01	ci left: 1.063878e-04	ci right 1.358637e-04	k: 265	n:2200000
TEX15   2200000 perm   2392 sec   (920 perm/sec)   p_kst 1.204545e-04   p_cons 8.328450e-01   p_joint 6.627273e-04

Joint ci ratio: 1.021727e-01	ci left: 6.315966e-04	ci right 7.000395e-04	k: 1470	n:2210000
Cons ci ratio: 1.181408e-03	ci left: 8.323318e-01	ci right 8.333162e-01	k: 1840542	n:2210000
KS ci ratio: 2.398856e-01	ci left: 1.063317e-04	ci right 1.357286e-04	k: 266	n:2210000
TEX15   2210000 perm   2410 sec   (917 perm/sec)   p_kst 1.203620e-04   p_cons 8.328244e-01   p_joint 6.651584e-04

Joint ci ratio: 1.020342e-01	ci left: 6.305074e-04	ci right 6.987340e-04	k: 1474	n:2220000
Cons ci ratio: 1.178706e-03	ci left: 8.323419e-01	ci right 8.333239e-01	k: 1848890	n:2220000
KS ci ratio: 2.398856e-01	ci left: 1.058527e-04	ci right 1.351172e-04	k: 266	n:2220000
TEX15   2220000 perm   2429 sec   (914 perm/sec)   p_kst 1.198198e-04   p_cons 8.328333e-01   p_joint 6.639640e-04

Joint ci ratio: 1.020343e-01	ci left: 6.276799e-04	ci right 6.956007e-04	k: 1474	n:2230000
Cons ci ratio: 1.175981e-03	ci left: 8.323617e-01	ci right 8.333415e-01	k: 1857260	n:2230000
KS ci ratio: 2.398857e-01	ci left: 1.053780e-04	ci right 1.345113e-04	k: 266	n:2230000
TEX15   2230000 perm   2448 sec   (911 perm/sec)   p_kst 1.192825e-04   p_cons 8.328520e-01   p_joint 6.609865e-04

Joint ci ratio: 1.018619e-01	ci left: 6.270530e-04	ci right 6.947844e-04	k: 1479	n:2240000
Cons ci ratio: 1.173296e-03	ci left: 8.323764e-01	ci right 8.333540e-01	k: 1865619	n:2240000
KS ci ratio: 2.398858e-01	ci left: 1.049076e-04	ci right 1.339108e-04	k: 266	n:2240000
TEX15   2240000 perm   2467 sec   (908 perm/sec)   p_kst 1.187500e-04   p_cons 8.328656e-01   p_joint 6.602679e-04

Joint ci ratio: 1.016218e-01	ci left: 6.272981e-04	ci right 6.948867e-04	k: 1486	n:2250000
Cons ci ratio: 1.170659e-03	ci left: 8.323839e-01	ci right 8.333593e-01	k: 1873962	n:2250000
KS ci ratio: 2.398858e-01	ci left: 1.044413e-04	ci right 1.333156e-04	k: 266	n:2250000
TEX15   2250000 perm   2486 sec   (905 perm/sec)   p_kst 1.182222e-04   p_cons 8.328720e-01   p_joint 6.604444e-04

Joint ci ratio: 1.014174e-01	ci left: 6.271099e-04	ci right 6.945343e-04	k: 1492	n:2260000
Cons ci ratio: 1.168040e-03	ci left: 8.323913e-01	ci right 8.333645e-01	k: 1882305	n:2260000
KS ci ratio: 2.398859e-01	ci left: 1.039792e-04	ci right 1.327258e-04	k: 266	n:2260000
TEX15   2260000 perm   2506 sec   (902 perm/sec)   p_kst 1.176991e-04   p_cons 8.328783e-01   p_joint 6.601770e-04

Joint ci ratio: 1.011805e-01	ci left: 6.273529e-04	ci right 6.946364e-04	k: 1499	n:2270000
Cons ci ratio: 1.165490e-03	ci left: 8.323863e-01	ci right 8.333574e-01	k: 1890620	n:2270000
KS ci ratio: 2.389924e-01	ci left: 1.043493e-04	ci right 1.330749e-04	k: 268	n:2270000
TEX15   2270000 perm   2525 sec   (899 perm/sec)   p_kst 1.180617e-04   p_cons 8.328722e-01   p_joint 6.603524e-04

Joint ci ratio: 1.009452e-01	ci left: 6.275939e-04	ci right 6.947375e-04	k: 1506	n:2280000
Cons ci ratio: 1.162921e-03	ci left: 8.323896e-01	ci right 8.333586e-01	k: 1898954	n:2280000
KS ci ratio: 2.385494e-01	ci left: 1.043040e-04	ci right 1.329560e-04	k: 269	n:2280000
TEX15   2280000 perm   2545 sec   (896 perm/sec)   p_kst 1.179825e-04   p_cons 8.328746e-01   p_joint 6.605263e-04

Joint ci ratio: 1.007449e-01	ci left: 6.274073e-04	ci right 6.943899e-04	k: 1512	n:2290000
Cons ci ratio: 1.160421e-03	ci left: 8.323808e-01	ci right 8.333477e-01	k: 1907260	n:2290000
KS ci ratio: 2.376707e-01	ci left: 1.046698e-04	ci right 1.333008e-04	k: 271	n:2290000
TEX15   2290000 perm   2564 sec   (893 perm/sec)   p_kst 1.183406e-04   p_cons 8.328646e-01   p_joint 6.602620e-04

Joint ci ratio: 1.171562e-01	ci left: 4.580141e-04	ci right 5.154297e-04	k: 1118	n:2300000
Cons ci ratio: 1.048238e-03	ci left: 8.583123e-01	ci right 8.592129e-01	k: 1975155	n:2300000
KS ci ratio: 2.376708e-01	ci left: 1.042147e-04	ci right 1.327212e-04	k: 271	n:2300000
TEX15   2300000 perm   2583 sec   (890 perm/sec)   p_kst 1.178261e-04   p_cons 8.587630e-01   p_joint 4.860870e-04

Joint ci ratio: 1.169474e-01	ci left: 4.577123e-04	ci right 5.149806e-04	k: 1122	n:2310000
Cons ci ratio: 1.045945e-03	ci left: 8.583182e-01	ci right 8.592168e-01	k: 1983754	n:2310000
KS ci ratio: 2.376709e-01	ci left: 1.037636e-04	ci right 1.321467e-04	k: 271	n:2310000
TEX15   2310000 perm   2603 sec   (887 perm/sec)   p_kst 1.173160e-04   p_cons 8.587680e-01   p_joint 4.857143e-04

Joint ci ratio: 1.165845e-01	ci left: 4.586685e-04	ci right 5.158662e-04	k: 1129	n:2320000
Cons ci ratio: 1.043672e-03	ci left: 8.583232e-01	ci right 8.592199e-01	k: 1992351	n:2320000
KS ci ratio: 2.368018e-01	ci left: 1.041271e-04	ci right 1.324903e-04	k: 273	n:2320000
TEX15   2320000 perm   2623 sec   (885 perm/sec)   p_kst 1.176724e-04   p_cons 8.587720e-01   p_joint 4.866379e-04

Joint ci ratio: 1.165847e-01	ci left: 4.566999e-04	ci right 5.136522e-04	k: 1129	n:2330000
Cons ci ratio: 1.041433e-03	ci left: 8.583234e-01	ci right 8.592182e-01	k: 2000937	n:2330000
KS ci ratio: 2.368019e-01	ci left: 1.036802e-04	ci right 1.319216e-04	k: 273	n:2330000
TEX15   2330000 perm   2642 sec   (882 perm/sec)   p_kst 1.171674e-04   p_cons 8.587712e-01   p_joint 4.845494e-04

Joint ci ratio: 1.161741e-01	ci left: 4.580675e-04	ci right 5.149754e-04	k: 1137	n:2340000
Cons ci ratio: 1.039162e-03	ci left: 8.583343e-01	ci right 8.592272e-01	k: 2009548	n:2340000
KS ci ratio: 2.368019e-01	ci left: 1.032372e-04	ci right 1.313579e-04	k: 273	n:2340000
TEX15   2340000 perm   2662 sec   (879 perm/sec)   p_kst 1.166667e-04   p_cons 8.587812e-01   p_joint 4.858974e-04

Joint ci ratio: 1.160722e-01	ci left: 4.569446e-04	ci right 5.136598e-04	k: 1139	n:2350000
Cons ci ratio: 1.036992e-03	ci left: 8.583251e-01	ci right 8.592161e-01	k: 2018112	n:2350000
KS ci ratio: 2.368020e-01	ci left: 1.027978e-04	ci right 1.307989e-04	k: 273	n:2350000
TEX15   2350000 perm   2682 sec   (876 perm/sec)   p_kst 1.161702e-04   p_cons 8.587711e-01   p_joint 4.846809e-04

Joint ci ratio: 1.158185e-01	ci left: 4.570656e-04	ci right 5.136633e-04	k: 1144	n:2360000
Cons ci ratio: 1.034919e-03	ci left: 8.582965e-01	ci right 8.591857e-01	k: 2026630	n:2360000
KS ci ratio: 2.363711e-01	ci left: 1.027609e-04	ci right 1.306935e-04	k: 274	n:2360000
TEX15   2360000 perm   2701 sec   (874 perm/sec)   p_kst 1.161017e-04   p_cons 8.587415e-01   p_joint 4.847458e-04

Joint ci ratio: 1.155664e-01	ci left: 4.571857e-04	ci right 5.136667e-04	k: 1149	n:2370000
Cons ci ratio: 1.032736e-03	ci left: 8.582969e-01	ci right 8.591841e-01	k: 2035216	n:2370000
KS ci ratio: 2.363711e-01	ci left: 1.023273e-04	ci right 1.301420e-04	k: 274	n:2370000
TEX15   2370000 perm   2721 sec   (871 perm/sec)   p_kst 1.156118e-04   p_cons 8.587409e-01   p_joint 4.848101e-04

Joint ci ratio: 1.153160e-01	ci left: 4.573050e-04	ci right 5.136699e-04	k: 1154	n:2380000
Cons ci ratio: 1.030600e-03	ci left: 8.582892e-01	ci right 8.591746e-01	k: 2043783	n:2380000
KS ci ratio: 2.363712e-01	ci left: 1.018973e-04	ci right 1.295952e-04	k: 274	n:2380000
TEX15   2380000 perm   2742 sec   (868 perm/sec)   p_kst 1.151261e-04   p_cons 8.587324e-01   p_joint 4.848739e-04

Joint ci ratio: 1.151666e-01	ci left: 4.566106e-04	ci right 5.128121e-04	k: 1157	n:2390000
Cons ci ratio: 1.028462e-03	ci left: 8.582854e-01	ci right 8.591690e-01	k: 2052359	n:2390000
KS ci ratio: 2.355163e-01	ci left: 1.022583e-04	ci right 1.299392e-04	k: 276	n:2390000
TEX15   2390000 perm   2762 sec   (865 perm/sec)   p_kst 1.154812e-04   p_cons 8.587276e-01   p_joint 4.841004e-04

Joint ci ratio: 1.149682e-01	ci left: 4.563267e-04	ci right 5.123900e-04	k: 1161	n:2400000
Cons ci ratio: 1.026376e-03	ci left: 8.582724e-01	ci right 8.591542e-01	k: 2060913	n:2400000
KS ci ratio: 2.346706e-01	ci left: 1.026165e-04	ci right 1.302801e-04	k: 278	n:2400000
TEX15   2400000 perm   2783 sec   (862 perm/sec)   p_kst 1.158333e-04   p_cons 8.587138e-01   p_joint 4.837500e-04

Joint ci ratio: 1.146725e-01	ci left: 4.568514e-04	ci right 5.128250e-04	k: 1167	n:2410000
Cons ci ratio: 1.024222e-03	ci left: 8.582787e-01	ci right 8.591586e-01	k: 2069513	n:2410000
KS ci ratio: 2.338339e-01	ci left: 1.029719e-04	ci right 1.306180e-04	k: 280	n:2410000
TEX15   2410000 perm   2804 sec   (860 perm/sec)   p_kst 1.161826e-04   p_cons 8.587191e-01   p_joint 4.842324e-04

Joint ci ratio: 1.145745e-01	ci left: 4.557663e-04	ci right 5.115560e-04	k: 1169	n:2420000
Cons ci ratio: 1.022227e-03	ci left: 8.582502e-01	ci right 8.591283e-01	k: 2078029	n:2420000
KS ci ratio: 2.334190e-01	ci left: 1.029354e-04	ci right 1.305156e-04	k: 281	n:2420000
TEX15   2420000 perm   2825 sec   (857 perm/sec)   p_kst 1.161157e-04   p_cons 8.586897e-01   p_joint 4.830579e-04

Joint ci ratio: 1.142818e-01	ci left: 4.562892e-04	ci right 5.119906e-04	k: 1175	n:2430000
Cons ci ratio: 1.020189e-03	ci left: 8.582350e-01	ci right 8.591114e-01	k: 2086577	n:2430000
KS ci ratio: 2.330062e-01	ci left: 1.028993e-04	ci right 1.304140e-04	k: 282	n:2430000
TEX15   2430000 perm   2845 sec   (854 perm/sec)   p_kst 1.160494e-04   p_cons 8.586737e-01   p_joint 4.835391e-04

Joint ci ratio: 1.136552e-01	ci left: 4.595952e-04	ci right 5.153719e-04	k: 1188	n:2440000
Cons ci ratio: 1.018161e-03	ci left: 8.582204e-01	ci right 8.590951e-01	k: 2095126	n:2440000
KS ci ratio: 2.321872e-01	ci left: 1.032495e-04	ci right 1.307469e-04	k: 284	n:2440000
TEX15   2440000 perm   2866 sec   (851 perm/sec)   p_kst 1.163934e-04   p_cons 8.586582e-01   p_joint 4.868852e-04

Joint ci ratio: 1.134169e-01	ci left: 4.597022e-04	ci right 5.153671e-04	k: 1193	n:2450000
Cons ci ratio: 1.016045e-03	ci left: 8.582301e-01	ci right 8.591029e-01	k: 2103734	n:2450000
KS ci ratio: 2.321872e-01	ci left: 1.028281e-04	ci right 1.302132e-04	k: 284	n:2450000
TEX15   2450000 perm   2887 sec   (849 perm/sec)   p_kst 1.159184e-04   p_cons 8.586669e-01   p_joint 4.869388e-04

Joint ci ratio: 1.130859e-01	ci left: 4.605984e-04	ci right 5.161982e-04	k: 1200	n:2460000
Cons ci ratio: 1.013963e-03	ci left: 8.582344e-01	ci right 8.591054e-01	k: 2112329	n:2460000
KS ci ratio: 2.317809e-01	ci left: 1.027930e-04	ci right 1.301140e-04	k: 285	n:2460000
TEX15   2460000 perm   2908 sec   (846 perm/sec)   p_kst 1.158537e-04   p_cons 8.586703e-01   p_joint 4.878049e-04

Joint ci ratio: 1.129450e-01	ci left: 4.599139e-04	ci right 5.153572e-04	k: 1203	n:2470000
Cons ci ratio: 1.011842e-03	ci left: 8.582512e-01	ci right 8.591204e-01	k: 2120955	n:2470000
KS ci ratio: 2.317810e-01	ci left: 1.023768e-04	ci right 1.295872e-04	k: 285	n:2470000
TEX15   2470000 perm   2929 sec   (843 perm/sec)   p_kst 1.153846e-04   p_cons 8.586862e-01   p_joint 4.870445e-04

Joint ci ratio: 1.125251e-01	ci left: 4.615861e-04	ci right 5.170105e-04	k: 1212	n:2480000
Cons ci ratio: 1.009879e-03	ci left: 8.582332e-01	ci right 8.591007e-01	k: 2129495	n:2480000
KS ci ratio: 2.297809e-01	ci left: 1.038636e-04	ci right 1.311972e-04	k: 290	n:2480000
TEX15   2480000 perm   2950 sec   (841 perm/sec)   p_kst 1.169355e-04   p_cons 8.586673e-01   p_joint 4.887097e-04

Joint ci ratio: 1.123862e-01	ci left: 4.609033e-04	ci right 5.161728e-04	k: 1215	n:2490000
Cons ci ratio: 1.007848e-03	ci left: 8.582342e-01	ci right 8.590999e-01	k: 2138082	n:2490000
KS ci ratio: 2.293872e-01	ci left: 1.038250e-04	ci right 1.310949e-04	k: 291	n:2490000
TEX15   2490000 perm   2971 sec   (838 perm/sec)   p_kst 1.168675e-04   p_cons 8.586675e-01   p_joint 4.879518e-04

Joint ci ratio: 1.123401e-01	ci left: 4.594484e-04	ci right 5.145194e-04	k: 1216	n:2500000
Cons ci ratio: 1.005765e-03	ci left: 8.582508e-01	ci right 8.591148e-01	k: 2146708	n:2500000
KS ci ratio: 2.293872e-01	ci left: 1.034097e-04	ci right 1.305706e-04	k: 291	n:2500000
TEX15   2500000 perm   2992 sec   (836 perm/sec)   p_kst 1.164000e-04   p_cons 8.586832e-01   p_joint 4.864000e-04

Joint ci ratio: 1.120642e-01	ci left: 4.599413e-04	ci right 5.149270e-04	k: 1222	n:2510000
Cons ci ratio: 1.003885e-03	ci left: 8.582214e-01	ci right 8.590838e-01	k: 2155219	n:2510000
KS ci ratio: 2.286056e-01	ci left: 1.037488e-04	ci right 1.308928e-04	k: 293	n:2510000
TEX15   2510000 perm   3013 sec   (833 perm/sec)   p_kst 1.167331e-04   p_cons 8.586530e-01   p_joint 4.868526e-04

Joint ci ratio: 1.118358e-01	ci left: 4.600447e-04	ci right 5.149233e-04	k: 1227	n:2520000
Cons ci ratio: 1.001851e-03	ci left: 8.582320e-01	ci right 8.590926e-01	k: 2163830	n:2520000
KS ci ratio: 2.282178e-01	ci left: 1.037112e-04	ci right 1.307929e-04	k: 294	n:2520000
TEX15   2520000 perm   3034 sec   (830 perm/sec)   p_kst 1.166667e-04   p_cons 8.586627e-01   p_joint 4.869048e-04

Joint ci ratio: 1.116088e-01	ci left: 4.601474e-04	ci right 5.149195e-04	k: 1232	n:2530000
Cons ci ratio: 9.998978e-04	ci left: 8.582258e-01	ci right 8.590848e-01	k: 2172399	n:2530000
KS ci ratio: 2.282179e-01	ci left: 1.033013e-04	ci right 1.302759e-04	k: 294	n:2530000
TEX15   2530000 perm   3056 sec   (828 perm/sec)   p_kst 1.162055e-04   p_cons 8.586557e-01   p_joint 4.869565e-04

Joint ci ratio: 1.112485e-01	ci left: 4.613976e-04	ci right 5.161296e-04	k: 1240	n:2540000
Cons ci ratio: 9.978912e-04	ci left: 8.582355e-01	ci right 8.590928e-01	k: 2181008	n:2540000
KS ci ratio: 2.270661e-01	ci left: 1.040083e-04	ci right 1.310114e-04	k: 297	n:2540000
TEX15   2540000 perm   3077 sec   (825 perm/sec)   p_kst 1.169291e-04   p_cons 8.586646e-01   p_joint 4.881890e-04

Joint ci ratio: 1.111143e-01	ci left: 4.607320e-04	ci right 5.153147e-04	k: 1243	n:2550000
Cons ci ratio: 9.959643e-04	ci left: 8.582287e-01	ci right 8.590842e-01	k: 2189575	n:2550000
KS ci ratio: 2.263079e-01	ci left: 1.043402e-04	ci right 1.313264e-04	k: 299	n:2550000
TEX15   2550000 perm   3098 sec   (823 perm/sec)   p_kst 1.172549e-04   p_cons 8.586569e-01   p_joint 4.874510e-04

Joint ci ratio: 1.109361e-01	ci left: 4.604514e-04	ci right 5.149077e-04	k: 1247	n:2560000
Cons ci ratio: 9.940180e-04	ci left: 8.582293e-01	ci right 8.590832e-01	k: 2198161	n:2560000
KS ci ratio: 2.251847e-01	ci left: 1.050383e-04	ci right 1.320514e-04	k: 302	n:2560000
TEX15   2560000 perm   3120 sec   (820 perm/sec)   p_kst 1.179688e-04   p_cons 8.586566e-01   p_joint 4.871094e-04

Joint ci ratio: 1.106703e-01	ci left: 4.609297e-04	ci right 5.153034e-04	k: 1253	n:2570000
Cons ci ratio: 9.920864e-04	ci left: 8.582291e-01	ci right 8.590814e-01	k: 2206745	n:2570000
KS ci ratio: 2.240781e-01	ci left: 1.057312e-04	ci right 1.327705e-04	k: 305	n:2570000
TEX15   2570000 perm   3142 sec   (818 perm/sec)   p_kst 1.186770e-04   p_cons 8.586556e-01   p_joint 4.875486e-04

Joint ci ratio: 1.104504e-01	ci left: 4.610275e-04	ci right 5.152977e-04	k: 1258	n:2580000
Cons ci ratio: 9.901769e-04	ci left: 8.582262e-01	ci right 8.590768e-01	k: 2215322	n:2580000
KS ci ratio: 2.237129e-01	ci left: 1.056872e-04	ci right 1.326651e-04	k: 306	n:2580000
TEX15   2580000 perm   3164 sec   (816 perm/sec)   p_kst 1.186047e-04   p_cons 8.586519e-01   p_joint 4.875969e-04

Joint ci ratio: 1.101881e-01	ci left: 4.615002e-04	ci right 5.156886e-04	k: 1264	n:2590000
Cons ci ratio: 9.882487e-04	ci left: 8.582307e-01	ci right 8.590797e-01	k: 2223918	n:2590000
KS ci ratio: 2.229877e-01	ci left: 1.060082e-04	ci right 1.329682e-04	k: 308	n:2590000
TEX15   2590000 perm   3186 sec   (813 perm/sec)   p_kst 1.189189e-04   p_cons 8.586556e-01   p_joint 4.880309e-04

Joint ci ratio: 1.099710e-01	ci left: 4.615953e-04	ci right 5.156812e-04	k: 1269	n:2600000
Cons ci ratio: 9.864113e-04	ci left: 8.582155e-01	ci right 8.590629e-01	k: 2232463	n:2600000
KS ci ratio: 2.222695e-01	ci left: 1.063268e-04	ci right 1.332689e-04	k: 310	n:2600000
TEX15   2600000 perm   3208 sec   (810 perm/sec)   p_kst 1.192308e-04   p_cons 8.586396e-01   p_joint 4.880769e-04

Joint ci ratio: 1.096262e-01	ci left: 4.628077e-04	ci right 5.168547e-04	k: 1277	n:2610000
Cons ci ratio: 9.845049e-04	ci left: 8.582200e-01	ci right 8.590657e-01	k: 2241059	n:2610000
KS ci ratio: 2.205038e-01	ci left: 1.077289e-04	ci right 1.347800e-04	k: 315	n:2610000
TEX15   2610000 perm   3230 sec   (808 perm/sec)   p_kst 1.206897e-04   p_cons 8.586433e-01   p_joint 4.892720e-04

Joint ci ratio: 1.094978e-01	ci left: 4.621549e-04	ci right 5.160584e-04	k: 1280	n:2620000
Cons ci ratio: 9.826728e-04	ci left: 8.582088e-01	ci right 8.590530e-01	k: 2249614	n:2620000
KS ci ratio: 2.201558e-01	ci left: 1.076784e-04	ci right 1.346683e-04	k: 316	n:2620000
TEX15   2620000 perm   3251 sec   (806 perm/sec)   p_kst 1.206107e-04   p_cons 8.586313e-01   p_joint 4.885496e-04

Joint ci ratio: 1.091150e-01	ci left: 4.637262e-04	ci right 5.176117e-04	k: 1289	n:2630000
Cons ci ratio: 9.808525e-04	ci left: 8.581973e-01	ci right 8.590399e-01	k: 2258168	n:2630000
KS ci ratio: 2.201558e-01	ci left: 1.072689e-04	ci right 1.341563e-04	k: 316	n:2630000
TEX15   2630000 perm   3274 sec   (803 perm/sec)   p_kst 1.201521e-04   p_cons 8.586190e-01   p_joint 4.901141e-04

Joint ci ratio: 1.089042e-01	ci left: 4.638119e-04	ci right 5.175966e-04	k: 1294	n:2640000
Cons ci ratio: 9.790101e-04	ci left: 8.581939e-01	ci right 8.590349e-01	k: 2266743	n:2640000
KS ci ratio: 2.198094e-01	ci left: 1.072205e-04	ci right 1.340477e-04	k: 317	n:2640000
TEX15   2640000 perm   3296 sec   (801 perm/sec)   p_kst 1.200758e-04   p_cons 8.586148e-01   p_joint 4.901515e-04

Joint ci ratio: 1.088202e-01	ci left: 4.627959e-04	ci right 5.164187e-04	k: 1296	n:2650000
Cons ci ratio: 9.770718e-04	ci left: 8.582169e-01	ci right 8.590562e-01	k: 2275388	n:2650000
KS ci ratio: 2.198095e-01	ci left: 1.068159e-04	ci right 1.335419e-04	k: 317	n:2650000
TEX15   2650000 perm   3319 sec   (799 perm/sec)   p_kst 1.196226e-04   p_cons 8.586370e-01   p_joint 4.890566e-04

Joint ci ratio: 1.086111e-01	ci left: 4.628846e-04	ci right 5.164081e-04	k: 1301	n:2660000
Cons ci ratio: 9.752355e-04	ci left: 8.582172e-01	ci right 8.590549e-01	k: 2283973	n:2660000
KS ci ratio: 2.191214e-01	ci left: 1.071249e-04	ci right 1.338330e-04	k: 319	n:2660000
TEX15   2660000 perm   3341 sec   (796 perm/sec)   p_kst 1.199248e-04   p_cons 8.586365e-01   p_joint 4.890977e-04

Joint ci ratio: 1.085278e-01	ci left: 4.618797e-04	ci right 5.152434e-04	k: 1303	n:2670000
Cons ci ratio: 9.733630e-04	ci left: 8.582291e-01	ci right 8.590652e-01	k: 2292589	n:2670000
KS ci ratio: 2.187799e-01	ci left: 1.070777e-04	ci right 1.337268e-04	k: 320	n:2670000
TEX15   2670000 perm   3364 sec   (794 perm/sec)   p_kst 1.198502e-04   p_cons 8.586476e-01   p_joint 4.880150e-04

Joint ci ratio: 1.083618e-01	ci left: 4.616083e-04	ci right 5.148538e-04	k: 1307	n:2680000
Cons ci ratio: 9.715700e-04	ci left: 8.582237e-01	ci right 8.590583e-01	k: 2301159	n:2680000
KS ci ratio: 2.184399e-01	ci left: 1.070308e-04	ci right 1.336213e-04	k: 321	n:2680000
TEX15   2680000 perm   3387 sec   (791 perm/sec)   p_kst 1.197761e-04   p_cons 8.586414e-01   p_joint 4.876866e-04

Joint ci ratio: 1.082378e-01	ci left: 4.609773e-04	ci right 5.140853e-04	k: 1310	n:2690000
Cons ci ratio: 9.697482e-04	ci left: 8.582281e-01	ci right 8.590611e-01	k: 2309755	n:2690000
KS ci ratio: 2.181015e-01	ci left: 1.069844e-04	ci right 1.335166e-04	k: 322	n:2690000
TEX15   2690000 perm   3412 sec   (788 perm/sec)   p_kst 1.197026e-04   p_cons 8.586450e-01   p_joint 4.869888e-04

Joint ci ratio: 1.080730e-01	ci left: 4.607114e-04	ci right 5.137028e-04	k: 1314	n:2700000
Cons ci ratio: 9.680237e-04	ci left: 8.582105e-01	ci right 8.590420e-01	k: 2318292	n:2700000
KS ci ratio: 2.174293e-01	ci left: 1.072885e-04	ci right 1.338032e-04	k: 324	n:2700000
TEX15   2700000 perm   3435 sec   (786 perm/sec)   p_kst 1.200000e-04   p_cons 8.586267e-01   p_joint 4.866667e-04

Joint ci ratio: 1.076643e-01	ci left: 4.626019e-04	ci right 5.155968e-04	k: 1324	n:2710000
Cons ci ratio: 9.662173e-04	ci left: 8.582160e-01	ci right 8.590460e-01	k: 2326891	n:2710000
KS ci ratio: 2.167634e-01	ci left: 1.075905e-04	ci right 1.340875e-04	k: 326	n:2710000
TEX15   2710000 perm   3459 sec   (783 perm/sec)   p_kst 1.202952e-04   p_cons 8.586314e-01   p_joint 4.885609e-04

Joint ci ratio: 1.074214e-01	ci left: 4.630477e-04	ci right 5.159664e-04	k: 1330	n:2720000
Cons ci ratio: 9.645086e-04	ci left: 8.581993e-01	ci right 8.590278e-01	k: 2335430	n:2720000
KS ci ratio: 2.167634e-01	ci left: 1.071949e-04	ci right 1.335946e-04	k: 326	n:2720000
TEX15   2720000 perm   3482 sec   (781 perm/sec)   p_kst 1.198529e-04   p_cons 8.586140e-01   p_joint 4.889706e-04

Joint ci ratio: 1.073408e-01	ci left: 4.620644e-04	ci right 5.148287e-04	k: 1332	n:2730000
Cons ci ratio: 9.627480e-04	ci left: 8.581982e-01	ci right 8.590252e-01	k: 2344011	n:2730000
KS ci ratio: 2.167635e-01	ci left: 1.068023e-04	ci right 1.331052e-04	k: 326	n:2730000
TEX15   2730000 perm   3505 sec   (779 perm/sec)   p_kst 1.194139e-04   p_cons 8.586121e-01   p_joint 4.879121e-04

Joint ci ratio: 1.071801e-01	ci left: 4.617988e-04	ci right 5.144487e-04	k: 1336	n:2740000
Cons ci ratio: 9.608886e-04	ci left: 8.582245e-01	ci right 8.590499e-01	k: 2352667	n:2740000
KS ci ratio: 2.164328e-01	ci left: 1.067576e-04	ci right 1.330042e-04	k: 327	n:2740000
TEX15   2740000 perm   3527 sec   (777 perm/sec)   p_kst 1.193431e-04   p_cons 8.586376e-01   p_joint 4.875912e-04

Joint ci ratio: 1.069803e-01	ci left: 4.618890e-04	ci right 5.144449e-04	k: 1341	n:2750000
Cons ci ratio: 9.591620e-04	ci left: 8.582197e-01	ci right 8.590436e-01	k: 2361238	n:2750000
KS ci ratio: 2.161036e-01	ci left: 1.067134e-04	ci right 1.329038e-04	k: 328	n:2750000
TEX15   2750000 perm   3550 sec   (775 perm/sec)   p_kst 1.192727e-04   p_cons 8.586320e-01   p_joint 4.876364e-04

Joint ci ratio: 1.068609e-01	ci left: 4.612734e-04	ci right 5.136970e-04	k: 1344	n:2760000
Cons ci ratio: 9.575433e-04	ci left: 8.581898e-01	ci right 8.590123e-01	k: 2369740	n:2760000
KS ci ratio: 2.161037e-01	ci left: 1.063267e-04	ci right 1.324223e-04	k: 328	n:2760000
TEX15   2760000 perm   3573 sec   (772 perm/sec)   p_kst 1.188406e-04   p_cons 8.586014e-01   p_joint 4.869565e-04

Joint ci ratio: 1.066234e-01	ci left: 4.617163e-04	ci right 5.140663e-04	k: 1350	n:2770000
Cons ci ratio: 9.557522e-04	ci left: 8.582061e-01	ci right 8.590271e-01	k: 2378369	n:2770000
KS ci ratio: 2.157760e-01	ci left: 1.062844e-04	ci right 1.323247e-04	k: 329	n:2770000
TEX15   2770000 perm   3596 sec   (770 perm/sec)   p_kst 1.187726e-04   p_cons 8.586170e-01   p_joint 4.873646e-04

Joint ci ratio: 1.062308e-01	ci left: 4.635569e-04	ci right 5.159100e-04	k: 1360	n:2780000
Cons ci ratio: 9.540532e-04	ci left: 8.582014e-01	ci right 8.590209e-01	k: 2386940	n:2780000
KS ci ratio: 2.144799e-01	ci left: 1.072634e-04	ci right 1.333650e-04	k: 333	n:2780000
TEX15   2780000 perm   3621 sec   (768 perm/sec)   p_kst 1.197842e-04   p_cons 8.586115e-01   p_joint 4.892086e-04

Joint ci ratio: 1.059587e-01	ci left: 4.643378e-04	ci right 5.166363e-04	k: 1367	n:2790000
Cons ci ratio: 9.523659e-04	ci left: 8.581960e-01	ci right 8.590140e-01	k: 2395509	n:2790000
KS ci ratio: 2.141596e-01	ci left: 1.072181e-04	ci right 1.332646e-04	k: 334	n:2790000
TEX15   2790000 perm   3644 sec   (766 perm/sec)   p_kst 1.197133e-04   p_cons 8.586054e-01   p_joint 4.899642e-04

Joint ci ratio: 1.058813e-01	ci left: 4.633748e-04	ci right 5.155244e-04	k: 1369	n:2800000
Cons ci ratio: 9.506386e-04	ci left: 8.582031e-01	ci right 8.590197e-01	k: 2404113	n:2800000
KS ci ratio: 2.141596e-01	ci left: 1.068352e-04	ci right 1.327887e-04	k: 334	n:2800000
TEX15   2800000 perm   3667 sec   (763 perm/sec)   p_kst 1.192857e-04   p_cons 8.586118e-01   p_joint 4.889286e-04

Joint ci ratio: 1.056502e-01	ci left: 4.638045e-04	ci right 5.158815e-04	k: 1375	n:2810000
Cons ci ratio: 9.488567e-04	ci left: 8.582266e-01	ci right 8.590417e-01	k: 2412763	n:2810000
KS ci ratio: 2.138407e-01	ci left: 1.067918e-04	ci right 1.326910e-04	k: 335	n:2810000
TEX15   2810000 perm   3691 sec   (761 perm/sec)   p_kst 1.192171e-04   p_cons 8.586345e-01   p_joint 4.893238e-04

Joint ci ratio: 1.054588e-01	ci left: 4.638861e-04	ci right 5.158720e-04	k: 1380	n:2820000
Cons ci ratio: 9.470751e-04	ci left: 8.582524e-01	ci right 8.590660e-01	k: 2421420	n:2820000
KS ci ratio: 2.132071e-01	ci left: 1.070844e-04	ci right 1.329676e-04	k: 337	n:2820000
TEX15   2820000 perm   3715 sec   (759 perm/sec)   p_kst 1.195035e-04   p_cons 8.586596e-01   p_joint 4.893617e-04

Joint ci ratio: 1.054207e-01	ci left: 4.625909e-04	ci right 5.144118e-04	k: 1381	n:2830000
Cons ci ratio: 9.453805e-04	ci left: 8.582582e-01	ci right 8.590703e-01	k: 2430021	n:2830000
KS ci ratio: 2.132071e-01	ci left: 1.067060e-04	ci right 1.324977e-04	k: 337	n:2830000
TEX15   2830000 perm   3739 sec   (757 perm/sec)   p_kst 1.190813e-04   p_cons 8.586647e-01   p_joint 4.879859e-04

Joint ci ratio: 1.052305e-01	ci left: 4.626763e-04	ci right 5.144074e-04	k: 1386	n:2840000
Cons ci ratio: 9.437552e-04	ci left: 8.582485e-01	ci right 8.590592e-01	k: 2438578	n:2840000
KS ci ratio: 2.125791e-01	ci left: 1.069970e-04	ci right 1.327729e-04	k: 339	n:2840000
TEX15   2840000 perm   3763 sec   (755 perm/sec)   p_kst 1.193662e-04   p_cons 8.586542e-01   p_joint 4.880282e-04

Joint ci ratio: 1.050036e-01	ci left: 4.631028e-04	ci right 5.147631e-04	k: 1392	n:2850000
Cons ci ratio: 9.420580e-04	ci left: 8.582596e-01	ci right 8.590688e-01	k: 2447194	n:2850000
KS ci ratio: 2.125791e-01	ci left: 1.066215e-04	ci right 1.323070e-04	k: 339	n:2850000
TEX15   2850000 perm   3786 sec   (753 perm/sec)   p_kst 1.189474e-04   p_cons 8.586646e-01   p_joint 4.884211e-04

Joint ci ratio: 1.049284e-01	ci left: 4.621645e-04	ci right 5.136809e-04	k: 1394	n:2860000
Cons ci ratio: 9.404741e-04	ci left: 8.582436e-01	ci right 8.590515e-01	k: 2455733	n:2860000
KS ci ratio: 2.122672e-01	ci left: 1.065798e-04	ci right 1.322127e-04	k: 340	n:2860000
TEX15   2860000 perm   3810 sec   (751 perm/sec)   p_kst 1.188811e-04   p_cons 8.586479e-01   p_joint 4.874126e-04

Joint ci ratio: 1.047034e-01	ci left: 4.625899e-04	ci right 5.140364e-04	k: 1400	n:2870000
Cons ci ratio: 9.388928e-04	ci left: 8.582291e-01	ci right 8.590356e-01	k: 2464276	n:2870000
KS ci ratio: 2.116474e-01	ci left: 1.068683e-04	ci right 1.324858e-04	k: 342	n:2870000
TEX15   2870000 perm   3834 sec   (749 perm/sec)   p_kst 1.191638e-04   p_cons 8.586328e-01   p_joint 4.878049e-04

Joint ci ratio: 1.043687e-01	ci left: 4.640270e-04	ci right 5.154582e-04	k: 1409	n:2880000
Cons ci ratio: 9.372846e-04	ci left: 8.582238e-01	ci right 8.590289e-01	k: 2472845	n:2880000
KS ci ratio: 2.104239e-01	ci left: 1.078127e-04	ci right 1.334879e-04	k: 346	n:2880000
TEX15   2880000 perm   3858 sec   (746 perm/sec)   p_kst 1.201389e-04   p_cons 8.586267e-01   p_joint 4.892361e-04

Joint ci ratio: 1.041841e-01	ci left: 4.641064e-04	ci right 5.154498e-04	k: 1414	n:2890000
Cons ci ratio: 9.356473e-04	ci left: 8.582282e-01	ci right 8.590319e-01	k: 2481442	n:2890000
KS ci ratio: 2.098201e-01	ci left: 1.080953e-04	ci right 1.337544e-04	k: 348	n:2890000
TEX15   2890000 perm   3882 sec   (744 perm/sec)   p_kst 1.204152e-04   p_cons 8.586304e-01   p_joint 4.892734e-04

Joint ci ratio: 1.041474e-01	ci left: 4.628418e-04	ci right 5.140262e-04	k: 1415	n:2900000
Cons ci ratio: 9.339867e-04	ci left: 8.582409e-01	ci right 8.590432e-01	k: 2490063	n:2900000
KS ci ratio: 2.095201e-01	ci left: 1.080493e-04	ci right 1.336561e-04	k: 349	n:2900000
TEX15   2900000 perm   3906 sec   (742 perm/sec)   p_kst 1.203448e-04   p_cons 8.586424e-01   p_joint 4.879310e-04

Joint ci ratio: 1.039640e-01	ci left: 4.629248e-04	ci right 5.140227e-04	k: 1420	n:2910000
Cons ci ratio: 9.324154e-04	ci left: 8.582325e-01	ci right 8.590334e-01	k: 2498623	n:2910000
KS ci ratio: 2.095202e-01	ci left: 1.076780e-04	ci right 1.331968e-04	k: 349	n:2910000
TEX15   2910000 perm   3930 sec   (741 perm/sec)   p_kst 1.199313e-04   p_cons 8.586333e-01   p_joint 4.879725e-04

Joint ci ratio: 1.038544e-01	ci left: 4.623401e-04	ci right 5.133165e-04	k: 1423	n:2920000
Cons ci ratio: 9.308625e-04	ci left: 8.582214e-01	ci right 8.590210e-01	k: 2507175	n:2920000
KS ci ratio: 2.095202e-01	ci left: 1.073092e-04	ci right 1.327407e-04	k: 349	n:2920000
TEX15   2920000 perm   3954 sec   (739 perm/sec)   p_kst 1.195205e-04   p_cons 8.586216e-01   p_joint 4.873288e-04

Joint ci ratio: 1.035639e-01	ci left: 4.634218e-04	ci right 5.143657e-04	k: 1431	n:2930000
Cons ci ratio: 9.292820e-04	ci left: 8.582196e-01	ci right 8.590179e-01	k: 2515754	n:2930000
KS ci ratio: 2.083330e-01	ci left: 1.082367e-04	ci right 1.337241e-04	k: 353	n:2930000
TEX15   2930000 perm   3979 sec   (736 perm/sec)   p_kst 1.204778e-04   p_cons 8.586191e-01   p_joint 4.883959e-04

Joint ci ratio: 1.034556e-01	ci left: 4.628395e-04	ci right 5.136630e-04	k: 1434	n:2940000
Cons ci ratio: 9.276031e-04	ci left: 8.582458e-01	ci right 8.590426e-01	k: 2524415	n:2940000
KS ci ratio: 2.080394e-01	ci left: 1.081910e-04	ci right 1.336271e-04	k: 354	n:2940000
TEX15   2940000 perm   4003 sec   (735 perm/sec)   p_kst 1.204082e-04   p_cons 8.586446e-01   p_joint 4.877551e-04

Joint ci ratio: 1.032400e-01	ci left: 4.632519e-04	ci right 5.140082e-04	k: 1440	n:2950000
Cons ci ratio: 9.260715e-04	ci left: 8.582355e-01	ci right 8.590309e-01	k: 2532969	n:2950000
KS ci ratio: 2.071658e-01	ci left: 1.087883e-04	ci right 1.342439e-04	k: 357	n:2950000
TEX15   2950000 perm   4028 sec   (732 perm/sec)   p_kst 1.210169e-04   p_cons 8.586336e-01   p_joint 4.881356e-04

Joint ci ratio: 1.030970e-01	ci left: 4.630033e-04	ci right 5.136579e-04	k: 1444	n:2960000
Cons ci ratio: 9.245153e-04	ci left: 8.582337e-01	ci right 8.590278e-01	k: 2541548	n:2960000
KS ci ratio: 2.068771e-01	ci left: 1.087411e-04	ci right 1.341457e-04	k: 358	n:2960000
TEX15   2960000 perm   4052 sec   (730 perm/sec)   p_kst 1.209459e-04   p_cons 8.586311e-01   p_joint 4.878378e-04

Joint ci ratio: 1.029902e-01	ci left: 4.624284e-04	ci right 5.129645e-04	k: 1447	n:2970000
Cons ci ratio: 9.229208e-04	ci left: 8.582440e-01	ci right 8.590368e-01	k: 2550163	n:2970000
KS ci ratio: 2.068771e-01	ci left: 1.083750e-04	ci right 1.336940e-04	k: 358	n:2970000
TEX15   2970000 perm   4077 sec   (728 perm/sec)   p_kst 1.205387e-04   p_cons 8.586407e-01   p_joint 4.872054e-04

Joint ci ratio: 1.029192e-01	ci left: 4.615305e-04	ci right 5.119316e-04	k: 1449	n:2980000
Cons ci ratio: 9.213639e-04	ci left: 8.582465e-01	ci right 8.590380e-01	k: 2558755	n:2980000
KS ci ratio: 2.068772e-01	ci left: 1.080113e-04	ci right 1.332454e-04	k: 358	n:2980000
TEX15   2980000 perm   4102 sec   (727 perm/sec)   p_kst 1.201342e-04   p_cons 8.586426e-01   p_joint 4.862416e-04

Joint ci ratio: 1.028838e-01	ci left: 4.603128e-04	ci right 5.105625e-04	k: 1450	n:2990000
Cons ci ratio: 9.199301e-04	ci left: 8.582186e-01	ci right 8.590088e-01	k: 2567256	n:2990000
KS ci ratio: 2.068772e-01	ci left: 1.076501e-04	ci right 1.327998e-04	k: 358	n:2990000
TEX15   2990000 perm   4126 sec   (725 perm/sec)   p_kst 1.197324e-04   p_cons 8.586140e-01   p_joint 4.849498e-04

Joint ci ratio: 1.027776e-01	ci left: 4.597527e-04	ci right 5.098864e-04	k: 1453	n:3000000
Cons ci ratio: 9.183756e-04	ci left: 8.582246e-01	ci right 8.590134e-01	k: 2575858	n:3000000
KS ci ratio: 2.065897e-01	ci left: 1.076073e-04	ci right 1.327077e-04	k: 359	n:3000000
TEX15   3000000 perm   4152 sec   (723 perm/sec)   p_kst 1.196667e-04   p_cons 8.586193e-01   p_joint 4.843333e-04

Joint ci ratio: 1.026718e-01	ci left: 4.591963e-04	ci right 5.092147e-04	k: 1456	n:3010000
Cons ci ratio: 9.168465e-04	ci left: 8.582258e-01	ci right 8.590134e-01	k: 2584446	n:3010000
KS ci ratio: 2.063034e-01	ci left: 1.075649e-04	ci right 1.326162e-04	k: 360	n:3010000
TEX15   3010000 perm   4177 sec   (721 perm/sec)   p_kst 1.196013e-04   p_cons 8.586199e-01   p_joint 4.837209e-04

Joint ci ratio: 1.024260e-01	ci left: 4.599342e-04	ci right 5.099058e-04	k: 1463	n:3020000
Cons ci ratio: 9.152913e-04	ci left: 8.582360e-01	ci right 8.590222e-01	k: 2593061	n:3020000
KS ci ratio: 2.057342e-01	ci left: 1.078368e-04	ci right 1.328734e-04	k: 362	n:3020000
TEX15   3020000 perm   4202 sec   (719 perm/sec)   p_kst 1.198675e-04   p_cons 8.586295e-01   p_joint 4.844371e-04

Joint ci ratio: 1.022864e-01	ci left: 4.597026e-04	ci right 5.095769e-04	k: 1467	n:3030000
Cons ci ratio: 9.137428e-04	ci left: 8.582465e-01	ci right 8.590314e-01	k: 2601677	n:3030000
KS ci ratio: 2.054515e-01	ci left: 1.077939e-04	ci right 1.327819e-04	k: 363	n:3030000
TEX15   3030000 perm   4227 sec   (717 perm/sec)   p_kst 1.198020e-04   p_cons 8.586393e-01   p_joint 4.841584e-04

Joint ci ratio: 1.020433e-01	ci left: 4.604343e-04	ci right 5.102621e-04	k: 1474	n:3040000
Cons ci ratio: 9.121675e-04	ci left: 8.582661e-01	ci right 8.590497e-01	k: 2610321	n:3040000
KS ci ratio: 2.048893e-01	ci left: 1.080634e-04	ci right 1.330367e-04	k: 365	n:3040000
TEX15   3040000 perm   4251 sec   (715 perm/sec)   p_kst 1.200658e-04   p_cons 8.586582e-01   p_joint 4.848684e-04

Joint ci ratio: 1.019053e-01	ci left: 4.602027e-04	ci right 5.099340e-04	k: 1478	n:3050000
Cons ci ratio: 9.107073e-04	ci left: 8.582570e-01	ci right 8.590393e-01	k: 2618878	n:3050000
KS ci ratio: 2.048894e-01	ci left: 1.077091e-04	ci right 1.326006e-04	k: 365	n:3050000
TEX15   3050000 perm   4276 sec   (713 perm/sec)   p_kst 1.196721e-04   p_cons 8.586485e-01   p_joint 4.845902e-04

Joint ci ratio: 1.018709e-01	ci left: 4.590172e-04	ci right 5.086027e-04	k: 1479	n:3060000
Cons ci ratio: 9.092308e-04	ci left: 8.582542e-01	ci right 8.590353e-01	k: 2627454	n:3060000
KS ci ratio: 2.048894e-01	ci left: 1.073571e-04	ci right 1.321672e-04	k: 365	n:3060000
TEX15   3060000 perm   4301 sec   (711 perm/sec)   p_kst 1.192810e-04   p_cons 8.586451e-01   p_joint 4.833333e-04

Joint ci ratio: 1.016992e-01	ci left: 4.591092e-04	ci right 5.086161e-04	k: 1484	n:3070000
Cons ci ratio: 9.077432e-04	ci left: 8.582564e-01	ci right 8.590361e-01	k: 2636045	n:3070000
KS ci ratio: 2.043318e-01	ci left: 1.076255e-04	ci right 1.324215e-04	k: 367	n:3070000
TEX15   3070000 perm   4327 sec   (710 perm/sec)   p_kst 1.195440e-04   p_cons 8.586466e-01   p_joint 4.833876e-04

Joint ci ratio: 1.014604e-01	ci left: 4.598336e-04	ci right 5.092952e-04	k: 1491	n:3080000
Cons ci ratio: 9.062569e-04	ci left: 8.582601e-01	ci right 8.590386e-01	k: 2644641	n:3080000
KS ci ratio: 2.040548e-01	ci left: 1.075842e-04	ci right 1.323328e-04	k: 368	n:3080000
TEX15   3080000 perm   4351 sec   (708 perm/sec)   p_kst 1.194805e-04   p_cons 8.586497e-01   p_joint 4.840909e-04

Joint ci ratio: 1.012231e-01	ci left: 4.605534e-04	ci right 5.099698e-04	k: 1498	n:3090000
Cons ci ratio: 9.046946e-04	ci left: 8.582862e-01	ci right 8.590633e-01	k: 2653306	n:3090000
KS ci ratio: 2.032303e-01	ci left: 1.081574e-04	ci right 1.329249e-04	k: 371	n:3090000
TEX15   3090000 perm   4376 sec   (706 perm/sec)   p_kst 1.200647e-04   p_cons 8.586751e-01   p_joint 4.847896e-04

Joint ci ratio: 1.010884e-01	ci left: 4.603255e-04	ci right 5.096477e-04	k: 1502	n:3100000
Cons ci ratio: 9.032339e-04	ci left: 8.582869e-01	ci right 8.590628e-01	k: 2661893	n:3100000
KS ci ratio: 2.032303e-01	ci left: 1.078085e-04	ci right 1.324961e-04	k: 371	n:3100000
TEX15   3100000 perm   4401 sec   (704 perm/sec)   p_kst 1.196774e-04   p_cons 8.586752e-01   p_joint 4.845161e-04

Joint ci ratio: 1.008538e-01	ci left: 4.610393e-04	ci right 5.103165e-04	k: 1509	n:3110000
Cons ci ratio: 9.018078e-04	ci left: 8.582802e-01	ci right 8.590548e-01	k: 2670457	n:3110000
KS ci ratio: 2.026862e-01	ci left: 1.080722e-04	ci right 1.327458e-04	k: 373	n:3110000
TEX15   3110000 perm   4428 sec   (702 perm/sec)   p_kst 1.199357e-04   p_cons 8.586678e-01   p_joint 4.852090e-04

Joint ci ratio: 1.007205e-01	ci left: 4.608113e-04	ci right 5.099953e-04	k: 1513	n:3120000
Cons ci ratio: 9.003693e-04	ci left: 8.582787e-01	ci right 8.590521e-01	k: 2679037	n:3120000
KS ci ratio: 2.026862e-01	ci left: 1.077258e-04	ci right 1.323203e-04	k: 373	n:3120000
TEX15   3120000 perm   4454 sec   (700 perm/sec)   p_kst 1.195513e-04   p_cons 8.586657e-01   p_joint 4.849359e-04

Joint ci ratio: 1.005214e-01	ci left: 4.612078e-04	ci right 5.103310e-04	k: 1519	n:3130000
Cons ci ratio: 8.989247e-04	ci left: 8.582807e-01	ci right 8.590529e-01	k: 2687628	n:3130000
KS ci ratio: 2.021464e-01	ci left: 1.079883e-04	ci right 1.325689e-04	k: 375	n:3130000
TEX15   3130000 perm   4480 sec   (699 perm/sec)   p_kst 1.198083e-04   p_cons 8.586671e-01   p_joint 4.853035e-04

Joint ci ratio: 1.002251e-01	ci left: 4.625333e-04	ci right 5.116439e-04	k: 1528	n:3140000
Cons ci ratio: 8.975236e-04	ci left: 8.582728e-01	ci right 8.590438e-01	k: 2696188	n:3140000
KS ci ratio: 2.002904e-01	ci left: 1.097613e-04	ci right 1.344881e-04	k: 382	n:3140000
TEX15   3140000 perm   4505 sec   (697 perm/sec)   p_kst 1.216561e-04   p_cons 8.586586e-01   p_joint 4.866242e-04

Joint ci ratio: 1.001597e-01	ci left: 4.616839e-04	ci right 5.106705e-04	k: 1530	n:3150000
Cons ci ratio: 8.960774e-04	ci left: 8.582789e-01	ci right 8.590487e-01	k: 2704792	n:3150000
KS ci ratio: 2.002904e-01	ci left: 1.094129e-04	ci right 1.340612e-04	k: 382	n:3150000
TEX15   3150000 perm   4532 sec   (695 perm/sec)   p_kst 1.212698e-04   p_cons 8.586641e-01   p_joint 4.857143e-04

Joint ci ratio: 1.000291e-01	ci left: 4.614570e-04	ci right 5.103520e-04	k: 1534	n:3160000
Cons ci ratio: 8.946557e-04	ci left: 8.582803e-01	ci right 8.590488e-01	k: 2713381	n:3160000
KS ci ratio: 1.997695e-01	ci left: 1.096679e-04	ci right 1.343015e-04	k: 384	n:3160000
TEX15   3160000 perm   4558 sec   (693 perm/sec)   p_kst 1.215190e-04   p_cons 8.586649e-01   p_joint 4.854430e-04

Joint ci ratio: 9.976939e-02	ci left: 4.624619e-04	ci right 5.113287e-04	k: 1542	n:3170000
Cons ci ratio: 8.932535e-04	ci left: 8.582782e-01	ci right 8.590455e-01	k: 2721959	n:3170000
KS ci ratio: 1.997695e-01	ci left: 1.093219e-04	ci right 1.338778e-04	k: 384	n:3170000
TEX15   3170000 perm   4584 sec   (691 perm/sec)   p_kst 1.211356e-04   p_cons 8.586621e-01   p_joint 4.864353e-04

Joint ci ratio: 9.954382e-02	ci left: 4.631541e-04	ci right 5.119768e-04	k: 1549	n:3180000
Cons ci ratio: 8.918798e-04	ci left: 8.582701e-01	ci right 8.590362e-01	k: 2730518	n:3180000
KS ci ratio: 1.992526e-01	ci left: 1.095756e-04	ci right 1.341172e-04	k: 386	n:3180000
TEX15   3180000 perm   4611 sec   (690 perm/sec)   p_kst 1.213836e-04   p_cons 8.586535e-01   p_joint 4.871069e-04

Joint ci ratio: 9.938365e-02	ci left: 4.632306e-04	ci right 5.119783e-04	k: 1554	n:3190000
Cons ci ratio: 8.904642e-04	ci left: 8.582752e-01	ci right 8.590401e-01	k: 2739119	n:3190000
KS ci ratio: 1.989957e-01	ci left: 1.095300e-04	ci right 1.340258e-04	k: 387	n:3190000
TEX15   3190000 perm   4637 sec   (688 perm/sec)   p_kst 1.213166e-04   p_cons 8.586580e-01   p_joint 4.871473e-04

Joint ci ratio: 9.919244e-02	ci left: 4.636114e-04	ci right 5.122999e-04	k: 1560	n:3200000
Cons ci ratio: 8.891056e-04	ci left: 8.582666e-01	ci right 8.590303e-01	k: 2747676	n:3200000
KS ci ratio: 1.987398e-01	ci left: 1.094847e-04	ci right 1.339350e-04	k: 388	n:3200000
TEX15   3200000 perm   4664 sec   (686 perm/sec)   p_kst 1.212500e-04   p_cons 8.586487e-01   p_joint 4.875000e-04

Joint ci ratio: 9.909729e-02	ci left: 4.630786e-04	ci right 5.116617e-04	k: 1563	n:3210000
Cons ci ratio: 8.876598e-04	ci left: 8.582835e-01	ci right 8.590460e-01	k: 2756315	n:3210000
KS ci ratio: 1.982308e-01	ci left: 1.097357e-04	ci right 1.341718e-04	k: 390	n:3210000
TEX15   3210000 perm   4690 sec   (684 perm/sec)   p_kst 1.214953e-04   p_cons 8.586651e-01   p_joint 4.869159e-04

Joint ci ratio: 9.890774e-02	ci left: 4.634576e-04	ci right 5.119821e-04	k: 1569	n:3220000
Cons ci ratio: 8.862641e-04	ci left: 8.582886e-01	ci right 8.590499e-01	k: 2764916	n:3220000
KS ci ratio: 1.977257e-01	ci left: 1.099852e-04	ci right 1.344069e-04	k: 392	n:3220000
TEX15   3220000 perm   4717 sec   (683 perm/sec)   p_kst 1.217391e-04   p_cons 8.586696e-01   p_joint 4.872671e-04

Joint ci ratio: 9.881340e-02	ci left: 4.629286e-04	ci right 5.113488e-04	k: 1572	n:3230000
Cons ci ratio: 8.848772e-04	ci left: 8.582930e-01	ci right 8.590531e-01	k: 2773515	n:3230000
KS ci ratio: 1.974747e-01	ci left: 1.099390e-04	ci right 1.343157e-04	k: 393	n:3230000
TEX15   3230000 perm   4744 sec   (681 perm/sec)   p_kst 1.216718e-04   p_cons 8.586734e-01   p_joint 4.866873e-04

Joint ci ratio: 9.875069e-02	ci left: 4.621019e-04	ci right 5.104031e-04	k: 1574	n:3240000
Cons ci ratio: 8.834833e-04	ci left: 8.583011e-01	ci right 8.590600e-01	k: 2782126	n:3240000
KS ci ratio: 1.972246e-01	ci left: 1.098931e-04	ci right 1.342250e-04	k: 394	n:3240000
TEX15   3240000 perm   4770 sec   (679 perm/sec)   p_kst 1.216049e-04   p_cons 8.586809e-01   p_joint 4.858025e-04

Joint ci ratio: 9.856311e-02	ci left: 4.624806e-04	ci right 5.107243e-04	k: 1580	n:3250000
Cons ci ratio: 8.821027e-04	ci left: 8.583073e-01	ci right 8.590650e-01	k: 2790731	n:3250000
KS ci ratio: 1.972246e-01	ci left: 1.095549e-04	ci right 1.338120e-04	k: 394	n:3250000
TEX15   3250000 perm   4797 sec   (678 perm/sec)   p_kst 1.212308e-04   p_cons 8.586865e-01   p_joint 4.861538e-04

Joint ci ratio: 9.846976e-02	ci left: 4.619595e-04	ci right 5.101006e-04	k: 1583	n:3260000
Cons ci ratio: 8.807364e-04	ci left: 8.583113e-01	ci right 8.590678e-01	k: 2799329	n:3260000
KS ci ratio: 1.972246e-01	ci left: 1.092189e-04	ci right 1.334016e-04	k: 394	n:3260000
TEX15   3260000 perm   4824 sec   (676 perm/sec)   p_kst 1.208589e-04   p_cons 8.586899e-01   p_joint 4.855828e-04

Joint ci ratio: 9.831471e-02	ci left: 4.620382e-04	ci right 5.101073e-04	k: 1588	n:3270000
Cons ci ratio: 8.794450e-04	ci left: 8.582963e-01	ci right 8.590517e-01	k: 2807865	n:3270000
KS ci ratio: 1.972247e-01	ci left: 1.088849e-04	ci right 1.329936e-04	k: 394	n:3270000
TEX15   3270000 perm   4851 sec   (674 perm/sec)   p_kst 1.204893e-04   p_cons 8.586743e-01   p_joint 4.856269e-04

Joint ci ratio: 9.809884e-02	ci left: 4.627113e-04	ci right 5.107387e-04	k: 1595	n:3280000
Cons ci ratio: 8.780711e-04	ci left: 8.583058e-01	ci right 8.590601e-01	k: 2816481	n:3280000
KS ci ratio: 1.969755e-01	ci left: 1.088427e-04	ci right 1.329081e-04	k: 395	n:3280000
TEX15   3280000 perm   4878 sec   (672 perm/sec)   p_kst 1.204268e-04   p_cons 8.586832e-01   p_joint 4.862805e-04

Joint ci ratio: 9.794553e-02	ci left: 4.627874e-04	ci right 5.107433e-04	k: 1600	n:3290000
Cons ci ratio: 8.767014e-04	ci left: 8.583158e-01	ci right 8.590689e-01	k: 2825099	n:3290000
KS ci ratio: 1.964799e-01	ci left: 1.090899e-04	ci right 1.331419e-04	k: 397	n:3290000
TEX15   3290000 perm   4905 sec   (671 perm/sec)   p_kst 1.206687e-04   p_cons 8.586927e-01   p_joint 4.863222e-04

Joint ci ratio: 9.776250e-02	ci left: 4.631587e-04	ci right 5.110582e-04	k: 1606	n:3300000
Cons ci ratio: 8.754354e-04	ci left: 8.582988e-01	ci right 8.590508e-01	k: 2833628	n:3300000
KS ci ratio: 1.959881e-01	ci left: 1.093356e-04	ci right 1.333742e-04	k: 399	n:3300000
TEX15   3300000 perm   4931 sec   (669 perm/sec)   p_kst 1.209091e-04   p_cons 8.586752e-01   p_joint 4.866667e-04

Joint ci ratio: 9.764107e-02	ci left: 4.629384e-04	ci right 5.107522e-04	k: 1610	n:3310000
Cons ci ratio: 8.740530e-04	ci left: 8.583158e-01	ci right 8.590666e-01	k: 2842269	n:3310000
KS ci ratio: 1.954999e-01	ci left: 1.095799e-04	ci right 1.336051e-04	k: 401	n:3310000
TEX15   3310000 perm   4959 sec   (667 perm/sec)   p_kst 1.211480e-04   p_cons 8.586915e-01   p_joint 4.864048e-04

Joint ci ratio: 9.755031e-02	ci left: 4.624255e-04	ci right 5.101395e-04	k: 1613	n:3320000
Cons ci ratio: 8.726781e-04	ci left: 8.583324e-01	ci right 8.590820e-01	k: 2850909	n:3320000
KS ci ratio: 1.955000e-01	ci left: 1.092498e-04	ci right 1.332027e-04	k: 401	n:3320000
TEX15   3320000 perm   4986 sec   (666 perm/sec)   p_kst 1.207831e-04   p_cons 8.587075e-01   p_joint 4.858434e-04

Joint ci ratio: 9.745980e-02	ci left: 4.619158e-04	ci right 5.095304e-04	k: 1616	n:3330000
Cons ci ratio: 8.713324e-04	ci left: 8.583425e-01	ci right 8.590911e-01	k: 2859528	n:3330000
KS ci ratio: 1.955000e-01	ci left: 1.089217e-04	ci right 1.328027e-04	k: 401	n:3330000
TEX15   3330000 perm   5013 sec   (664 perm/sec)   p_kst 1.204204e-04   p_cons 8.587171e-01   p_joint 4.852853e-04

Joint ci ratio: 9.730947e-02	ci left: 4.619933e-04	ci right 5.095383e-04	k: 1621	n:3340000
Cons ci ratio: 8.699767e-04	ci left: 8.583571e-01	ci right 8.591045e-01	k: 2868162	n:3340000
KS ci ratio: 1.952573e-01	ci left: 1.088804e-04	ci right 1.327191e-04	k: 402	n:3340000
TEX15   3340000 perm   5040 sec   (663 perm/sec)   p_kst 1.203593e-04   p_cons 8.587311e-01   p_joint 4.853293e-04

Joint ci ratio: 9.724957e-02	ci left: 4.611967e-04	ci right 5.086288e-04	k: 1623	n:3350000
Cons ci ratio: 8.686787e-04	ci left: 8.583573e-01	ci right 8.591036e-01	k: 2876748	n:3350000
KS ci ratio: 1.950155e-01	ci left: 1.088393e-04	ci right 1.326360e-04	k: 403	n:3350000
TEX15   3350000 perm   5068 sec   (661 perm/sec)   p_kst 1.202985e-04   p_cons 8.587307e-01   p_joint 4.844776e-04

Joint ci ratio: 9.707040e-02	ci left: 4.615665e-04	ci right 5.089442e-04	k: 1629	n:3360000
Cons ci ratio: 8.674311e-04	ci left: 8.583450e-01	ci right 8.590901e-01	k: 2885292	n:3360000
KS ci ratio: 1.945346e-01	ci left: 1.090816e-04	ci right 1.328654e-04	k: 405	n:3360000
TEX15   3360000 perm   5096 sec   (659 perm/sec)   p_kst 1.205357e-04   p_cons 8.587179e-01   p_joint 4.848214e-04

Joint ci ratio: 9.686261e-02	ci left: 4.622236e-04	ci right 5.095614e-04	k: 1636	n:3370000
Cons ci ratio: 8.662461e-04	ci left: 8.583167e-01	ci right 8.590608e-01	k: 2893782	n:3370000
KS ci ratio: 1.940571e-01	ci left: 1.093225e-04	ci right 1.330935e-04	k: 407	n:3370000
TEX15   3370000 perm   5123 sec   (658 perm/sec)   p_kst 1.207715e-04   p_cons 8.586890e-01   p_joint 4.854599e-04

Joint ci ratio: 9.683309e-02	ci left: 4.611448e-04	ci right 5.083569e-04	k: 1637	n:3380000
Cons ci ratio: 8.649752e-04	ci left: 8.583140e-01	ci right 8.590570e-01	k: 2902358	n:3380000
KS ci ratio: 1.940572e-01	ci left: 1.089990e-04	ci right 1.326997e-04	k: 407	n:3380000
TEX15   3380000 perm   5151 sec   (656 perm/sec)   p_kst 1.204142e-04   p_cons 8.586858e-01   p_joint 4.843195e-04

Joint ci ratio: 9.671509e-02	ci left: 4.609358e-04	ci right 5.080658e-04	k: 1641	n:3390000
Cons ci ratio: 8.636963e-04	ci left: 8.583152e-01	ci right 8.590571e-01	k: 2910947	n:3390000
KS ci ratio: 1.935833e-01	ci left: 1.092389e-04	ci right 1.329268e-04	k: 409	n:3390000
TEX15   3390000 perm   5178 sec   (655 perm/sec)   p_kst 1.206490e-04   p_cons 8.586864e-01   p_joint 4.840708e-04

Joint ci ratio: 9.642185e-02	ci left: 4.624503e-04	ci right 5.095837e-04	k: 1651	n:3400000
Cons ci ratio: 8.624627e-04	ci left: 8.583051e-01	ci right 8.590460e-01	k: 2919498	n:3400000
KS ci ratio: 1.933476e-01	ci left: 1.091974e-04	ci right 1.328442e-04	k: 410	n:3400000
TEX15   3400000 perm   5205 sec   (653 perm/sec)   p_kst 1.205882e-04   p_cons 8.586759e-01   p_joint 4.855882e-04

Joint ci ratio: 9.627626e-02	ci left: 4.625251e-04	ci right 5.095909e-04	k: 1656	n:3410000
Cons ci ratio: 8.612499e-04	ci left: 8.582908e-01	ci right 8.590306e-01	k: 2928034	n:3410000
KS ci ratio: 1.931128e-01	ci left: 1.091563e-04	ci right 1.327621e-04	k: 411	n:3410000
TEX15   3410000 perm   5233 sec   (652 perm/sec)   p_kst 1.205279e-04   p_cons 8.586610e-01   p_joint 4.856305e-04

Joint ci ratio: 9.613133e-02	ci left: 4.625995e-04	ci right 5.095980e-04	k: 1661	n:3420000
Cons ci ratio: 8.599304e-04	ci left: 8.583081e-01	ci right 8.590468e-01	k: 2936678	n:3420000
KS ci ratio: 1.926458e-01	ci left: 1.093937e-04	ci right 1.329869e-04	k: 413	n:3420000
TEX15   3420000 perm   5262 sec   (650 perm/sec)   p_kst 1.207602e-04   p_cons 8.586778e-01   p_joint 4.856725e-04

Joint ci ratio: 9.604471e-02	ci left: 4.621044e-04	ci right 5.090079e-04	k: 1664	n:3430000
Cons ci ratio: 8.586108e-04	ci left: 8.583271e-01	ci right 8.590647e-01	k: 2945328	n:3430000
KS ci ratio: 1.924136e-01	ci left: 1.093522e-04	ci right 1.329047e-04	k: 414	n:3430000
TEX15   3430000 perm   5290 sec   (648 perm/sec)   p_kst 1.206997e-04   p_cons 8.586962e-01   p_joint 4.851312e-04

Joint ci ratio: 9.598712e-02	ci left: 4.613285e-04	ci right 5.081236e-04	k: 1666	n:3440000
Cons ci ratio: 8.573978e-04	ci left: 8.583175e-01	ci right 8.590540e-01	k: 2953880	n:3440000
KS ci ratio: 1.924136e-01	ci left: 1.090343e-04	ci right 1.325184e-04	k: 414	n:3440000
TEX15   3440000 perm   5318 sec   (647 perm/sec)   p_kst 1.203488e-04   p_cons 8.586860e-01   p_joint 4.843023e-04

Joint ci ratio: 9.578619e-02	ci left: 4.619717e-04	ci right 5.087284e-04	k: 1673	n:3450000
Cons ci ratio: 8.561081e-04	ci left: 8.583311e-01	ci right 8.590665e-01	k: 2962512	n:3450000
KS ci ratio: 1.924136e-01	ci left: 1.087183e-04	ci right 1.321343e-04	k: 414	n:3450000
TEX15   3450000 perm   5346 sec   (645 perm/sec)   p_kst 1.200000e-04   p_cons 8.586991e-01   p_joint 4.849275e-04

Joint ci ratio: 9.567196e-02	ci left: 4.617649e-04	ci right 5.084418e-04	k: 1677	n:3460000
Cons ci ratio: 8.548456e-04	ci left: 8.583386e-01	ci right 8.590729e-01	k: 2971123	n:3460000
KS ci ratio: 1.919516e-01	ci left: 1.089543e-04	ci right 1.323582e-04	k: 416	n:3460000
TEX15   3460000 perm   5375 sec   (644 perm/sec)   p_kst 1.202312e-04   p_cons 8.587061e-01   p_joint 4.846821e-04

Joint ci ratio: 9.558658e-02	ci left: 4.612780e-04	ci right 5.078618e-04	k: 1680	n:3470000
Cons ci ratio: 8.535917e-04	ci left: 8.583452e-01	ci right 8.590784e-01	k: 2979731	n:3470000
KS ci ratio: 1.917219e-01	ci left: 1.089147e-04	ci right 1.322788e-04	k: 417	n:3470000
TEX15   3470000 perm   5404 sec   (642 perm/sec)   p_kst 1.201729e-04   p_cons 8.587121e-01   p_joint 4.841499e-04

Joint ci ratio: 9.552981e-02	ci left: 4.605135e-04	ci right 5.069909e-04	k: 1682	n:3480000
Cons ci ratio: 8.523615e-04	ci left: 8.583465e-01	ci right 8.590787e-01	k: 2988321	n:3480000
KS ci ratio: 1.912648e-01	ci left: 1.091489e-04	ci right 1.325009e-04	k: 419	n:3480000
TEX15   3480000 perm   5432 sec   (641 perm/sec)   p_kst 1.204023e-04   p_cons 8.587129e-01   p_joint 4.833333e-04

Joint ci ratio: 9.541650e-02	ci left: 4.603127e-04	ci right 5.067117e-04	k: 1686	n:3490000
Cons ci ratio: 8.511386e-04	ci left: 8.583473e-01	ci right 8.590785e-01	k: 2996909	n:3490000
KS ci ratio: 1.910376e-01	ci left: 1.091089e-04	ci right 1.324215e-04	k: 420	n:3490000
TEX15   3490000 perm   5461 sec   (639 perm/sec)   p_kst 1.203438e-04   p_cons 8.587132e-01   p_joint 4.830946e-04

Joint ci ratio: 9.527541e-02	ci left: 4.603921e-04	ci right 5.067266e-04	k: 1691	n:3500000
Cons ci ratio: 8.498639e-04	ci left: 8.583644e-01	ci right 8.590945e-01	k: 3005554	n:3500000
KS ci ratio: 1.908111e-01	ci left: 1.090692e-04	ci right 1.323425e-04	k: 421	n:3500000
TEX15   3500000 perm   5489 sec   (638 perm/sec)   p_kst 1.202857e-04   p_cons 8.587297e-01   p_joint 4.831429e-04

Joint ci ratio: 9.524732e-02	ci left: 4.593585e-04	ci right 5.055746e-04	k: 1692	n:3510000
Cons ci ratio: 8.486438e-04	ci left: 8.583674e-01	ci right 8.590964e-01	k: 3014150	n:3510000
KS ci ratio: 1.908111e-01	ci left: 1.087585e-04	ci right 1.319654e-04	k: 421	n:3510000
TEX15   3510000 perm   5518 sec   (636 perm/sec)   p_kst 1.199430e-04   p_cons 8.587322e-01   p_joint 4.820513e-04

Joint ci ratio: 9.521925e-02	ci left: 4.583308e-04	ci right 5.044292e-04	k: 1693	n:3520000
Cons ci ratio: 8.473931e-04	ci left: 8.583806e-01	ci right 8.591086e-01	k: 3022782	n:3520000
KS ci ratio: 1.908111e-01	ci left: 1.084495e-04	ci right 1.315905e-04	k: 421	n:3520000
TEX15   3520000 perm   5547 sec   (635 perm/sec)   p_kst 1.196023e-04   p_cons 8.587449e-01   p_joint 4.809659e-04

Joint ci ratio: 9.505106e-02	ci left: 4.586917e-04	ci right 5.047404e-04	k: 1699	n:3530000
Cons ci ratio: 8.462517e-04	ci left: 8.583640e-01	ci right 8.590910e-01	k: 3031309	n:3530000
KS ci ratio: 1.903606e-01	ci left: 1.086818e-04	ci right 1.318113e-04	k: 423	n:3530000
TEX15   3530000 perm   5575 sec   (633 perm/sec)   p_kst 1.198300e-04   p_cons 8.587278e-01   p_joint 4.813031e-04

Joint ci ratio: 9.491158e-02	ci left: 4.587749e-04	ci right 5.047605e-04	k: 1704	n:3540000
Cons ci ratio: 8.450490e-04	ci left: 8.583664e-01	ci right 8.590923e-01	k: 3039903	n:3540000
KS ci ratio: 1.901365e-01	ci left: 1.086439e-04	ci right 1.317349e-04	k: 424	n:3540000
TEX15   3540000 perm   5604 sec   (632 perm/sec)   p_kst 1.197740e-04   p_cons 8.587297e-01   p_joint 4.813559e-04

Joint ci ratio: 9.480045e-02	ci left: 4.585826e-04	ci right 5.044921e-04	k: 1708	n:3550000
Cons ci ratio: 8.438602e-04	ci left: 8.583663e-01	ci right 8.590912e-01	k: 3048488	n:3550000
KS ci ratio: 1.901365e-01	ci left: 1.083378e-04	ci right 1.313638e-04	k: 424	n:3550000
TEX15   3550000 perm   5633 sec   (630 perm/sec)   p_kst 1.194366e-04   p_cons 8.587290e-01   p_joint 4.811268e-04

Joint ci ratio: 9.474507e-02	ci left: 4.578429e-04	ci right 5.036501e-04	k: 1710	n:3560000
Cons ci ratio: 8.426656e-04	ci left: 8.583692e-01	ci right 8.590931e-01	k: 3057084	n:3560000
KS ci ratio: 1.901366e-01	ci left: 1.080335e-04	ci right 1.309948e-04	k: 424	n:3560000
TEX15   3560000 perm   5662 sec   (629 perm/sec)   p_kst 1.191011e-04   p_cons 8.587315e-01   p_joint 4.803371e-04

Joint ci ratio: 9.463452e-02	ci left: 4.576543e-04	ci right 5.033863e-04	k: 1714	n:3570000
Cons ci ratio: 8.414791e-04	ci left: 8.583713e-01	ci right 8.590942e-01	k: 3065677	n:3570000
KS ci ratio: 1.899133e-01	ci left: 1.079977e-04	ci right 1.309213e-04	k: 425	n:3570000
TEX15   3570000 perm   5691 sec   (627 perm/sec)   p_kst 1.190476e-04   p_cons 8.587331e-01   p_joint 4.801120e-04

Joint ci ratio: 9.444195e-02	ci left: 4.582850e-04	ci right 5.039817e-04	k: 1721	n:3580000
Cons ci ratio: 8.403614e-04	ci left: 8.583550e-01	ci right 8.590769e-01	k: 3074204	n:3580000
KS ci ratio: 1.890278e-01	ci left: 1.087603e-04	ci right 1.317259e-04	k: 429	n:3580000
TEX15   3580000 perm   5720 sec   (626 perm/sec)   p_kst 1.198324e-04   p_cons 8.587162e-01   p_joint 4.807263e-04

Joint ci ratio: 9.427783e-02	ci left: 4.586404e-04	ci right 5.042886e-04	k: 1727	n:3590000
Cons ci ratio: 8.391681e-04	ci left: 8.583618e-01	ci right 8.590827e-01	k: 3082814	n:3590000
KS ci ratio: 1.888084e-01	ci left: 1.087228e-04	ci right 1.316506e-04	k: 430	n:3590000
TEX15   3590000 perm   5749 sec   (624 perm/sec)   p_kst 1.197772e-04   p_cons 8.587226e-01   p_joint 4.810585e-04

Joint ci ratio: 9.406031e-02	ci left: 4.595363e-04	ci right 5.051623e-04	k: 1735	n:3600000
Cons ci ratio: 8.379809e-04	ci left: 8.583684e-01	ci right 8.590883e-01	k: 3091423	n:3600000
KS ci ratio: 1.883718e-01	ci left: 1.089501e-04	ci right 1.318667e-04	k: 432	n:3600000
TEX15   3600000 perm   5778 sec   (623 perm/sec)   p_kst 1.200000e-04   p_cons 8.587286e-01   p_joint 4.819444e-04

Joint ci ratio: 9.387122e-02	ci left: 4.601568e-04	ci right 5.057476e-04	k: 1742	n:3610000
Cons ci ratio: 8.367968e-04	ci left: 8.583755e-01	ci right 8.590943e-01	k: 3100034	n:3610000
KS ci ratio: 1.883719e-01	ci left: 1.086483e-04	ci right 1.315014e-04	k: 432	n:3610000
TEX15   3610000 perm   5808 sec   (622 perm/sec)   p_kst 1.196676e-04   p_cons 8.587352e-01   p_joint 4.825485e-04

Joint ci ratio: 9.360302e-02	ci left: 4.615833e-04	ci right 5.071777e-04	k: 1752	n:3620000
Cons ci ratio: 8.356758e-04	ci left: 8.583656e-01	ci right 8.590835e-01	k: 3108584	n:3620000
KS ci ratio: 1.875077e-01	ci left: 1.094011e-04	ci right 1.322951e-04	k: 436	n:3620000
TEX15   3620000 perm   5837 sec   (620 perm/sec)   p_kst 1.204420e-04   p_cons 8.587249e-01   p_joint 4.839779e-04

Joint ci ratio: 9.352305e-02	ci left: 4.611189e-04	ci right 5.066263e-04	k: 1755	n:3630000
Cons ci ratio: 8.345175e-04	ci left: 8.583680e-01	ci right 8.590849e-01	k: 3117178	n:3630000
KS ci ratio: 1.875077e-01	ci left: 1.090998e-04	ci right 1.319306e-04	k: 436	n:3630000
TEX15   3630000 perm   5866 sec   (619 perm/sec)   p_kst 1.201102e-04   p_cons 8.587267e-01   p_joint 4.834711e-04

Joint ci ratio: 9.333718e-02	ci left: 4.617302e-04	ci right 5.072024e-04	k: 1762	n:3640000
Cons ci ratio: 8.333112e-04	ci left: 8.583857e-01	ci right 8.591016e-01	k: 3125828	n:3640000
KS ci ratio: 1.866553e-01	ci left: 1.098475e-04	ci right 1.327185e-04	k: 440	n:3640000
TEX15   3640000 perm   5895 sec   (617 perm/sec)   p_kst 1.208791e-04   p_cons 8.587440e-01   p_joint 4.840659e-04

Joint ci ratio: 9.325789e-02	ci left: 4.612679e-04	ci right 5.066539e-04	k: 1765	n:3650000
Cons ci ratio: 8.321759e-04	ci left: 8.583842e-01	ci right 8.590991e-01	k: 3134408	n:3650000
KS ci ratio: 1.862335e-01	ci left: 1.100689e-04	ci right 1.329283e-04	k: 442	n:3650000
TEX15   3650000 perm   5925 sec   (616 perm/sec)   p_kst 1.210959e-04   p_cons 8.587419e-01   p_joint 4.835616e-04

Joint ci ratio: 9.315246e-02	ci left: 4.610751e-04	ci right 5.063880e-04	k: 1769	n:3660000
Cons ci ratio: 8.310452e-04	ci left: 8.583827e-01	ci right 8.590966e-01	k: 3142988	n:3660000
KS ci ratio: 1.862335e-01	ci left: 1.097682e-04	ci right 1.325651e-04	k: 442	n:3660000
TEX15   3660000 perm   5955 sec   (615 perm/sec)   p_kst 1.207650e-04   p_cons 8.587399e-01   p_joint 4.833333e-04

Joint ci ratio: 9.302117e-02	ci left: 4.611494e-04	ci right 5.064023e-04	k: 1774	n:3670000
Cons ci ratio: 8.299424e-04	ci left: 8.583743e-01	ci right 8.590873e-01	k: 3151543	n:3670000
KS ci ratio: 1.862336e-01	ci left: 1.094691e-04	ci right 1.322039e-04	k: 442	n:3670000
TEX15   3670000 perm   5985 sec   (613 perm/sec)   p_kst 1.204360e-04   p_cons 8.587311e-01   p_joint 4.833787e-04

Joint ci ratio: 9.281221e-02	ci left: 4.620197e-04	ci right 5.072506e-04	k: 1782	n:3680000
Cons ci ratio: 8.288134e-04	ci left: 8.583750e-01	ci right 8.590870e-01	k: 3160131	n:3680000
KS ci ratio: 1.853984e-01	ci left: 1.102080e-04	ci right 1.329821e-04	k: 446	n:3680000
TEX15   3680000 perm   6015 sec   (612 perm/sec)   p_kst 1.211957e-04   p_cons 8.587312e-01   p_joint 4.842391e-04

Joint ci ratio: 9.270828e-02	ci left: 4.618265e-04	ci right 5.069851e-04	k: 1786	n:3690000
Cons ci ratio: 8.276371e-04	ci left: 8.583908e-01	ci right 8.591018e-01	k: 3168775	n:3690000
KS ci ratio: 1.851913e-01	ci left: 1.101678e-04	ci right 1.329053e-04	k: 447	n:3690000
TEX15   3690000 perm   6045 sec   (610 perm/sec)   p_kst 1.211382e-04   p_cons 8.587466e-01   p_joint 4.840108e-04

Joint ci ratio: 9.263059e-02	ci left: 4.613703e-04	ci right 5.064445e-04	k: 1789	n:3700000
Cons ci ratio: 8.264696e-04	ci left: 8.584055e-01	ci right 8.591155e-01	k: 3177415	n:3700000
KS ci ratio: 1.851914e-01	ci left: 1.098700e-04	ci right 1.325461e-04	k: 447	n:3700000
TEX15   3700000 perm   6075 sec   (609 perm/sec)   p_kst 1.208108e-04   p_cons 8.587608e-01   p_joint 4.835135e-04

Joint ci ratio: 9.247571e-02	ci left: 4.617065e-04	ci right 5.067340e-04	k: 1795	n:3710000
Cons ci ratio: 8.253326e-04	ci left: 8.584126e-01	ci right 8.591216e-01	k: 3186027	n:3710000
KS ci ratio: 1.845743e-01	ci left: 1.103451e-04	ci right 1.330349e-04	k: 450	n:3710000
TEX15   3710000 perm   6105 sec   (608 perm/sec)   p_kst 1.212938e-04   p_cons 8.587674e-01   p_joint 4.838275e-04

Joint ci ratio: 9.237292e-02	ci left: 4.615158e-04	ci right 5.064720e-04	k: 1799	n:3720000
Cons ci ratio: 8.241675e-04	ci left: 8.584293e-01	ci right 8.591373e-01	k: 3194675	n:3720000
KS ci ratio: 1.843701e-01	ci left: 1.103048e-04	ci right 1.329584e-04	k: 451	n:3720000
TEX15   3720000 perm   6135 sec   (606 perm/sec)   p_kst 1.212366e-04   p_cons 8.587836e-01   p_joint 4.836022e-04

Joint ci ratio: 9.224489e-02	ci left: 4.615880e-04	ci right 5.064856e-04	k: 1804	n:3730000
Cons ci ratio: 8.230718e-04	ci left: 8.584269e-01	ci right 8.591340e-01	k: 3203252	n:3730000
KS ci ratio: 1.837612e-01	ci left: 1.107763e-04	ci right 1.334433e-04	k: 454	n:3730000
TEX15   3730000 perm   6166 sec   (605 perm/sec)   p_kst 1.217158e-04   p_cons 8.587807e-01   p_joint 4.836461e-04

Joint ci ratio: 9.214286e-02	ci left: 4.613987e-04	ci right 5.062255e-04	k: 1808	n:3740000
Cons ci ratio: 8.219171e-04	ci left: 8.584432e-01	ci right 8.591493e-01	k: 3211899	n:3740000
KS ci ratio: 1.835596e-01	ci left: 1.107352e-04	ci right 1.333662e-04	k: 455	n:3740000
TEX15   3740000 perm   6196 sec   (604 perm/sec)   p_kst 1.216578e-04   p_cons 8.587965e-01   p_joint 4.834225e-04

Joint ci ratio: 9.201578e-02	ci left: 4.614709e-04	ci right 5.062396e-04	k: 1813	n:3750000
Cons ci ratio: 8.208312e-04	ci left: 8.584405e-01	ci right 8.591456e-01	k: 3220475	n:3750000
KS ci ratio: 1.829587e-01	ci left: 1.112033e-04	ci right 1.338472e-04	k: 458	n:3750000
TEX15   3750000 perm   6226 sec   (602 perm/sec)   p_kst 1.221333e-04   p_cons 8.587933e-01   p_joint 4.834667e-04

Joint ci ratio: 9.178831e-02	ci left: 4.625822e-04	ci right 5.073418e-04	k: 1822	n:3760000
Cons ci ratio: 8.197533e-04	ci left: 8.584367e-01	ci right 8.591409e-01	k: 3229047	n:3760000
KS ci ratio: 1.827597e-01	ci left: 1.111613e-04	ci right 1.337693e-04	k: 459	n:3760000
TEX15   3760000 perm   6257 sec   (601 perm/sec)   p_kst 1.220745e-04   p_cons 8.587891e-01   p_joint 4.845745e-04

Joint ci ratio: 9.168778e-02	ci left: 4.623919e-04	ci right 5.070814e-04	k: 1826	n:3770000
Cons ci ratio: 8.186241e-04	ci left: 8.584494e-01	ci right 8.591527e-01	k: 3237681	n:3770000
KS ci ratio: 1.825614e-01	ci left: 1.111195e-04	ci right 1.336918e-04	k: 460	n:3770000
TEX15   3770000 perm   6287 sec   (600 perm/sec)   p_kst 1.220159e-04   p_cons 8.588013e-01   p_joint 4.843501e-04

Joint ci ratio: 9.153759e-02	ci left: 4.627196e-04	ci right 5.073636e-04	k: 1832	n:3780000
Cons ci ratio: 8.175646e-04	ci left: 8.584427e-01	ci right 8.591451e-01	k: 3246242	n:3780000
KS ci ratio: 1.823637e-01	ci left: 1.110780e-04	ci right 1.336148e-04	k: 461	n:3780000
TEX15   3780000 perm   6317 sec   (598 perm/sec)   p_kst 1.219577e-04   p_cons 8.587942e-01   p_joint 4.846561e-04

Joint ci ratio: 9.138812e-02	ci left: 4.630456e-04	ci right 5.076442e-04	k: 1838	n:3790000
Cons ci ratio: 8.164924e-04	ci left: 8.584411e-01	ci right 8.591425e-01	k: 3254822	n:3790000
KS ci ratio: 1.821667e-01	ci left: 1.110368e-04	ci right 1.335381e-04	k: 462	n:3790000
TEX15   3790000 perm   6348 sec   (597 perm/sec)   p_kst 1.218997e-04   p_cons 8.587921e-01   p_joint 4.849604e-04

Joint ci ratio: 9.123939e-02	ci left: 4.633699e-04	ci right 5.079233e-04	k: 1844	n:3800000
Cons ci ratio: 8.154111e-04	ci left: 8.584434e-01	ci right 8.591439e-01	k: 3263417	n:3800000
KS ci ratio: 1.817745e-01	ci left: 1.112469e-04	ci right 1.337370e-04	k: 464	n:3800000
TEX15   3800000 perm   6379 sec   (596 perm/sec)   p_kst 1.221053e-04   p_cons 8.587939e-01   p_joint 4.852632e-04

Joint ci ratio: 9.114066e-02	ci left: 4.631797e-04	ci right 5.076640e-04	k: 1848	n:3810000
Cons ci ratio: 8.143323e-04	ci left: 8.584463e-01	ci right 8.591459e-01	k: 3272014	n:3810000
KS ci ratio: 1.815794e-01	ci left: 1.112055e-04	ci right 1.336603e-04	k: 465	n:3810000
TEX15   3810000 perm   6409 sec   (594 perm/sec)   p_kst 1.220472e-04   p_cons 8.587963e-01   p_joint 4.850394e-04

Joint ci ratio: 9.104224e-02	ci left: 4.629904e-04	ci right 5.074060e-04	k: 1852	n:3820000
Cons ci ratio: 8.132543e-04	ci left: 8.584501e-01	ci right 8.591488e-01	k: 3280615	n:3820000
KS ci ratio: 1.813849e-01	ci left: 1.111642e-04	ci right 1.335841e-04	k: 466	n:3820000
TEX15   3820000 perm   6440 sec   (593 perm/sec)   p_kst 1.219895e-04   p_cons 8.587997e-01   p_joint 4.848168e-04

Joint ci ratio: 9.087074e-02	ci left: 4.635677e-04	ci right 5.079504e-04	k: 1859	n:3830000
Cons ci ratio: 8.122452e-04	ci left: 8.584346e-01	ci right 8.591324e-01	k: 3289142	n:3830000
KS ci ratio: 1.813849e-01	ci left: 1.108740e-04	ci right 1.332353e-04	k: 466	n:3830000
TEX15   3830000 perm   6471 sec   (592 perm/sec)   p_kst 1.216710e-04   p_cons 8.587838e-01   p_joint 4.853786e-04

Joint ci ratio: 9.072451e-02	ci left: 4.638875e-04	ci right 5.082256e-04	k: 1865	n:3840000
Cons ci ratio: 8.111789e-04	ci left: 8.584375e-01	ci right 8.591344e-01	k: 3297739	n:3840000
KS ci ratio: 1.809977e-01	ci left: 1.110825e-04	ci right 1.334328e-04	k: 468	n:3840000
TEX15   3840000 perm   6502 sec   (591 perm/sec)   p_kst 1.218750e-04   p_cons 8.587862e-01   p_joint 4.856771e-04

Joint ci ratio: 9.060321e-02	ci left: 4.639518e-04	ci right 5.082336e-04	k: 1870	n:3850000
Cons ci ratio: 8.101368e-04	ci left: 8.584343e-01	ci right 8.591303e-01	k: 3306313	n:3850000
KS ci ratio: 1.808051e-01	ci left: 1.110419e-04	ci right 1.333577e-04	k: 469	n:3850000
TEX15   3850000 perm   6533 sec   (589 perm/sec)   p_kst 1.218182e-04   p_cons 8.587826e-01   p_joint 4.857143e-04

Joint ci ratio: 9.050652e-02	ci left: 4.637627e-04	ci right 5.079767e-04	k: 1874	n:3860000
Cons ci ratio: 8.090416e-04	ci left: 8.584483e-01	ci right 8.591434e-01	k: 3314953	n:3860000
KS ci ratio: 1.806130e-01	ci left: 1.110016e-04	ci right 1.332830e-04	k: 470	n:3860000
TEX15   3860000 perm   6563 sec   (588 perm/sec)   p_kst 1.217617e-04   p_cons 8.587961e-01   p_joint 4.854922e-04

Joint ci ratio: 9.045832e-02	ci left: 4.630694e-04	ci right 5.071926e-04	k: 1876	n:3870000
Cons ci ratio: 8.080490e-04	ci left: 8.584327e-01	ci right 8.591269e-01	k: 3323479	n:3870000
KS ci ratio: 1.806131e-01	ci left: 1.107148e-04	ci right 1.329386e-04	k: 470	n:3870000
TEX15   3870000 perm   6595 sec   (587 perm/sec)   p_kst 1.214470e-04   p_cons 8.587801e-01   p_joint 4.847545e-04

Joint ci ratio: 9.031408e-02	ci left: 4.633874e-04	ci right 5.074667e-04	k: 1882	n:3880000
Cons ci ratio: 8.070034e-04	ci left: 8.584343e-01	ci right 8.591276e-01	k: 3332071	n:3880000
KS ci ratio: 1.804216e-01	ci left: 1.106755e-04	ci right 1.328653e-04	k: 471	n:3880000
TEX15   3880000 perm   6627 sec   (586 perm/sec)   p_kst 1.213918e-04   p_cons 8.587812e-01   p_joint 4.850515e-04

Joint ci ratio: 9.021831e-02	ci left: 4.632012e-04	ci right 5.072137e-04	k: 1886	n:3890000
Cons ci ratio: 8.059679e-04	ci left: 8.584340e-01	ci right 8.591264e-01	k: 3340656	n:3890000
KS ci ratio: 1.802308e-01	ci left: 1.106365e-04	ci right 1.327924e-04	k: 472	n:3890000
TEX15   3890000 perm   6658 sec   (584 perm/sec)   p_kst 1.213368e-04   p_cons 8.587805e-01   p_joint 4.848329e-04

Joint ci ratio: 9.012285e-02	ci left: 4.630161e-04	ci right 5.069619e-04	k: 1890	n:3900000
Cons ci ratio: 8.048793e-04	ci left: 8.584509e-01	ci right 8.591424e-01	k: 3349308	n:3900000
KS ci ratio: 1.802308e-01	ci left: 1.103528e-04	ci right 1.324519e-04	k: 472	n:3900000
TEX15   3900000 perm   6689 sec   (583 perm/sec)   p_kst 1.210256e-04   p_cons 8.587969e-01   p_joint 4.846154e-04

Joint ci ratio: 8.993278e-02	ci left: 4.638319e-04	ci right 5.077574e-04	k: 1898	n:3910000
Cons ci ratio: 8.038282e-04	ci left: 8.584578e-01	ci right 8.591483e-01	k: 3357921	n:3910000
KS ci ratio: 1.798510e-01	ci left: 1.105590e-04	ci right 1.326477e-04	k: 474	n:3910000
TEX15   3910000 perm   6722 sec   (582 perm/sec)   p_kst 1.212276e-04   p_cons 8.588033e-01   p_joint 4.854220e-04

Joint ci ratio: 8.979103e-02	ci left: 4.641448e-04	ci right 5.080271e-04	k: 1904	n:3920000
Cons ci ratio: 8.028048e-04	ci left: 8.584574e-01	ci right 8.591471e-01	k: 3366506	n:3920000
KS ci ratio: 1.796620e-01	ci left: 1.105206e-04	ci right 1.325759e-04	k: 475	n:3920000
TEX15   3920000 perm   6754 sec   (580 perm/sec)   p_kst 1.211735e-04   p_cons 8.588026e-01   p_joint 4.857143e-04

Joint ci ratio: 8.969692e-02	ci left: 4.639588e-04	ci right 5.077750e-04	k: 1908	n:3930000
Cons ci ratio: 8.017676e-04	ci left: 8.584625e-01	ci right 8.591513e-01	k: 3375112	n:3930000
KS ci ratio: 1.792857e-01	ci left: 1.107254e-04	ci right 1.327703e-04	k: 477	n:3930000
TEX15   3930000 perm   6785 sec   (579 perm/sec)   p_kst 1.213740e-04   p_cons 8.588071e-01   p_joint 4.854962e-04

Joint ci ratio: 8.957969e-02	ci left: 4.640218e-04	ci right 5.077837e-04	k: 1913	n:3940000
Cons ci ratio: 8.007387e-04	ci left: 8.584662e-01	ci right 8.591541e-01	k: 3383713	n:3940000
KS ci ratio: 1.792857e-01	ci left: 1.104444e-04	ci right 1.324333e-04	k: 477	n:3940000
TEX15   3940000 perm   6817 sec   (578 perm/sec)   p_kst 1.210660e-04   p_cons 8.588104e-01   p_joint 4.855330e-04

Joint ci ratio: 8.948624e-02	ci left: 4.638370e-04	ci right 5.075335e-04	k: 1917	n:3950000
Cons ci ratio: 7.997229e-04	ci left: 8.584671e-01	ci right 8.591541e-01	k: 3392303	n:3950000
KS ci ratio: 1.792858e-01	ci left: 1.101648e-04	ci right 1.320980e-04	k: 477	n:3950000
TEX15   3950000 perm   6848 sec   (577 perm/sec)   p_kst 1.207595e-04   p_cons 8.588109e-01   p_joint 4.853165e-04

Joint ci ratio: 8.943965e-02	ci left: 4.631595e-04	ci right 5.067682e-04	k: 1919	n:3960000
Cons ci ratio: 7.987309e-04	ci left: 8.584619e-01	ci right 8.591481e-01	k: 3400869	n:3960000
KS ci ratio: 1.792858e-01	ci left: 1.098866e-04	ci right 1.317645e-04	k: 477	n:3960000
TEX15   3960000 perm   6881 sec   (575 perm/sec)   p_kst 1.204545e-04   p_cons 8.588053e-01   p_joint 4.845960e-04

Joint ci ratio: 8.927703e-02	ci left: 4.637167e-04	ci right 5.072944e-04	k: 1926	n:3970000
Cons ci ratio: 7.977044e-04	ci left: 8.584684e-01	ci right 8.591537e-01	k: 3409481	n:3970000
KS ci ratio: 1.792858e-01	ci left: 1.096098e-04	ci right 1.314326e-04	k: 477	n:3970000
TEX15   3970000 perm   6914 sec   (574 perm/sec)   p_kst 1.201511e-04   p_cons 8.588113e-01   p_joint 4.851385e-04

Joint ci ratio: 8.916143e-02	ci left: 4.637798e-04	ci right 5.073041e-04	k: 1931	n:3980000
Cons ci ratio: 7.967389e-04	ci left: 8.584575e-01	ci right 8.591420e-01	k: 3418024	n:3980000
KS ci ratio: 1.790986e-01	ci left: 1.095744e-04	ci right 1.313649e-04	k: 478	n:3980000
TEX15   3980000 perm   6946 sec   (573 perm/sec)   p_kst 1.201005e-04   p_cons 8.588000e-01   p_joint 4.851759e-04

Joint ci ratio: 8.904628e-02	ci left: 4.638426e-04	ci right 5.073137e-04	k: 1936	n:3990000
Cons ci ratio: 7.957431e-04	ci left: 8.584569e-01	ci right 8.591405e-01	k: 3426608	n:3990000
KS ci ratio: 1.787258e-01	ci left: 1.097786e-04	ci right 1.315593e-04	k: 480	n:3990000
TEX15   3990000 perm   6978 sec   (572 perm/sec)   p_kst 1.203008e-04   p_cons 8.587990e-01   p_joint 4.852130e-04

Joint ci ratio: 8.895448e-02	ci left: 4.636608e-04	ci right 5.070676e-04	k: 1940	n:4000000
Cons ci ratio: 7.947634e-04	ci left: 8.584526e-01	ci right 8.591354e-01	k: 3435177	n:4000000
KS ci ratio: 1.785403e-01	ci left: 1.097429e-04	ci right 1.314916e-04	k: 481	n:4000000
TEX15   4000000 perm   7011 sec   (571 perm/sec)   p_kst 1.202500e-04   p_cons 8.587942e-01   p_joint 4.850000e-04

Joint ci ratio: 8.884013e-02	ci left: 4.637237e-04	ci right 5.070777e-04	k: 1945	n:4010000
Cons ci ratio: 7.937456e-04	ci left: 8.584610e-01	ci right 8.591429e-01	k: 3443797	n:4010000
KS ci ratio: 1.785404e-01	ci left: 1.094693e-04	ci right 1.311637e-04	k: 481	n:4010000
TEX15   4010000 perm   7043 sec   (569 perm/sec)   p_kst 1.199501e-04   p_cons 8.588022e-01   p_joint 4.850374e-04

Joint ci ratio: 8.874898e-02	ci left: 4.635431e-04	ci right 5.068334e-04	k: 1949	n:4020000
Cons ci ratio: 7.927334e-04	ci left: 8.584689e-01	ci right 8.591500e-01	k: 3452415	n:4020000
KS ci ratio: 1.785404e-01	ci left: 1.091969e-04	ci right 1.308374e-04	k: 481	n:4020000
TEX15   4020000 perm   7076 sec   (568 perm/sec)   p_kst 1.196517e-04   p_cons 8.588097e-01   p_joint 4.848259e-04

Joint ci ratio: 8.859009e-02	ci left: 4.640913e-04	ci right 5.073513e-04	k: 1956	n:4030000
Cons ci ratio: 7.917615e-04	ci left: 8.584656e-01	ci right 8.591458e-01	k: 3460988	n:4030000
KS ci ratio: 1.779873e-01	ci left: 1.096372e-04	ci right 1.312903e-04	k: 484	n:4030000
TEX15   4030000 perm   7108 sec   (567 perm/sec)   p_kst 1.200993e-04   p_cons 8.588060e-01   p_joint 4.853598e-04

Joint ci ratio: 8.852228e-02	ci left: 4.636687e-04	ci right 5.068545e-04	k: 1959	n:4040000
Cons ci ratio: 7.907713e-04	ci left: 8.584690e-01	ci right 8.591483e-01	k: 3469588	n:4040000
KS ci ratio: 1.778041e-01	ci left: 1.096023e-04	ci right 1.312239e-04	k: 485	n:4040000
TEX15   4040000 perm   7140 sec   (566 perm/sec)   p_kst 1.200495e-04   p_cons 8.588089e-01   p_joint 4.849010e-04

Joint ci ratio: 8.852234e-02	ci left: 4.625238e-04	ci right 5.056030e-04	k: 1959	n:4050000
Cons ci ratio: 7.898372e-04	ci left: 8.584563e-01	ci right 8.591348e-01	k: 3478123	n:4050000
KS ci ratio: 1.778041e-01	ci left: 1.093317e-04	ci right 1.308999e-04	k: 485	n:4050000
TEX15   4050000 perm   7173 sec   (565 perm/sec)   p_kst 1.197531e-04   p_cons 8.587958e-01   p_joint 4.837037e-04

Joint ci ratio: 8.843215e-02	ci left: 4.623480e-04	ci right 5.053647e-04	k: 1963	n:4060000
Cons ci ratio: 7.888446e-04	ci left: 8.584626e-01	ci right 8.591403e-01	k: 3486735	n:4060000
KS ci ratio: 1.778041e-01	ci left: 1.090624e-04	ci right 1.305775e-04	k: 485	n:4060000
TEX15   4060000 perm   7206 sec   (563 perm/sec)   p_kst 1.194581e-04   p_cons 8.588017e-01   p_joint 4.834975e-04

Joint ci ratio: 8.836471e-02	ci left: 4.619328e-04	ci right 5.048764e-04	k: 1966	n:4070000
Cons ci ratio: 7.879212e-04	ci left: 8.584488e-01	ci right 8.591257e-01	k: 3495265	n:4070000
KS ci ratio: 1.778042e-01	ci left: 1.087944e-04	ci right 1.302566e-04	k: 485	n:4070000
TEX15   4070000 perm   7239 sec   (562 perm/sec)   p_kst 1.191646e-04   p_cons 8.587875e-01   p_joint 4.830467e-04

Joint ci ratio: 8.820787e-02	ci left: 4.624785e-04	ci right 5.053925e-04	k: 1973	n:4080000
Cons ci ratio: 7.869756e-04	ci left: 8.584428e-01	ci right 8.591189e-01	k: 3503827	n:4080000
KS ci ratio: 1.772579e-01	ci left: 1.092304e-04	ci right 1.307053e-04	k: 488	n:4080000
TEX15   4080000 perm   7271 sec   (561 perm/sec)   p_kst 1.196078e-04   p_cons 8.587811e-01   p_joint 4.835784e-04

Joint ci ratio: 8.809637e-02	ci left: 4.625432e-04	ci right 5.054063e-04	k: 1978	n:4090000
Cons ci ratio: 7.860025e-04	ci left: 8.584465e-01	ci right 8.591217e-01	k: 3512428	n:4090000
KS ci ratio: 1.770769e-01	ci left: 1.091970e-04	ci right 1.306411e-04	k: 489	n:4090000
TEX15   4090000 perm   7305 sec   (560 perm/sec)   p_kst 1.195599e-04   p_cons 8.587844e-01   p_joint 4.836186e-04

Joint ci ratio: 8.789669e-02	ci left: 4.635619e-04	ci right 5.064170e-04	k: 1987	n:4100000
Cons ci ratio: 7.850590e-04	ci left: 8.584420e-01	ci right 8.591165e-01	k: 3520996	n:4100000
KS ci ratio: 1.768965e-01	ci left: 1.091638e-04	ci right 1.305771e-04	k: 490	n:4100000
TEX15   4100000 perm   7338 sec   (559 perm/sec)   p_kst 1.195122e-04   p_cons 8.587795e-01   p_joint 4.846341e-04

Joint ci ratio: 8.783046e-02	ci left: 4.631479e-04	ci right 5.059308e-04	k: 1990	n:4110000
Cons ci ratio: 7.841488e-04	ci left: 8.584284e-01	ci right 8.591020e-01	k: 3529526	n:4110000
KS ci ratio: 1.767166e-01	ci left: 1.091307e-04	ci right 1.305135e-04	k: 491	n:4110000
TEX15   4110000 perm   7371 sec   (558 perm/sec)   p_kst 1.194647e-04   p_cons 8.587655e-01   p_joint 4.841849e-04

Joint ci ratio: 8.769841e-02	ci left: 4.634481e-04	ci right 5.061910e-04	k: 1996	n:4120000
Cons ci ratio: 7.831916e-04	ci left: 8.584303e-01	ci right 8.591031e-01	k: 3538120	n:4120000
KS ci ratio: 1.765373e-01	ci left: 1.090978e-04	ci right 1.304501e-04	k: 492	n:4120000
TEX15   4120000 perm   7404 sec   (556 perm/sec)   p_kst 1.194175e-04   p_cons 8.587670e-01   p_joint 4.844660e-04

Joint ci ratio: 8.767650e-02	ci left: 4.625628e-04	ci right 5.052128e-04	k: 1997	n:4130000
Cons ci ratio: 7.822130e-04	ci left: 8.584400e-01	ci right 8.591120e-01	k: 3546746	n:4130000
KS ci ratio: 1.765374e-01	ci left: 1.088336e-04	ci right 1.301343e-04	k: 492	n:4130000
TEX15   4130000 perm   7437 sec   (555 perm/sec)   p_kst 1.191283e-04   p_cons 8.587763e-01   p_joint 4.835351e-04

Joint ci ratio: 8.763268e-02	ci left: 4.619180e-04	ci right 5.044862e-04	k: 1999	n:4140000
Cons ci ratio: 7.813017e-04	ci left: 8.584299e-01	ci right 8.591010e-01	k: 3555290	n:4140000
KS ci ratio: 1.765374e-01	ci left: 1.085708e-04	ci right 1.298199e-04	k: 492	n:4140000
TEX15   4140000 perm   7469 sec   (554 perm/sec)   p_kst 1.188406e-04   p_cons 8.587657e-01   p_joint 4.828502e-04

Joint ci ratio: 8.747970e-02	ci left: 4.624547e-04	ci right 5.049942e-04	k: 2006	n:4150000
Cons ci ratio: 7.803503e-04	ci left: 8.584332e-01	ci right 8.591036e-01	k: 3563890	n:4150000
KS ci ratio: 1.760027e-01	ci left: 1.090001e-04	ci right 1.302619e-04	k: 495	n:4150000
TEX15   4150000 perm   7503 sec   (553 perm/sec)   p_kst 1.192771e-04   p_cons 8.587687e-01   p_joint 4.833735e-04

Joint ci ratio: 8.741441e-02	ci left: 4.620484e-04	ci right 5.045172e-04	k: 2009	n:4160000
Cons ci ratio: 7.794108e-04	ci left: 8.584340e-01	ci right 8.591035e-01	k: 3572479	n:4160000
KS ci ratio: 1.758255e-01	ci left: 1.089679e-04	ci right 1.301997e-04	k: 496	n:4160000
TEX15   4160000 perm   7536 sec   (552 perm/sec)   p_kst 1.192308e-04   p_cons 8.587690e-01   p_joint 4.829327e-04

Joint ci ratio: 8.728422e-02	ci left: 4.623478e-04	ci right 5.047776e-04	k: 2015	n:4170000
Cons ci ratio: 7.785170e-04	ci left: 8.584215e-01	ci right 8.590903e-01	k: 3581013	n:4170000
KS ci ratio: 1.756489e-01	ci left: 1.089359e-04	ci right 1.301378e-04	k: 497	n:4170000
TEX15   4170000 perm   7570 sec   (551 perm/sec)   p_kst 1.191847e-04   p_cons 8.587561e-01   p_joint 4.832134e-04

Joint ci ratio: 8.719777e-02	ci left: 4.621778e-04	ci right 5.045478e-04	k: 2019	n:4180000
Cons ci ratio: 7.775971e-04	ci left: 8.584181e-01	ci right 8.590861e-01	k: 3589585	n:4180000
KS ci ratio: 1.756489e-01	ci left: 1.086752e-04	ci right 1.298265e-04	k: 497	n:4180000
TEX15   4180000 perm   7604 sec   (550 perm/sec)   p_kst 1.188995e-04   p_cons 8.587524e-01   p_joint 4.830144e-04

Joint ci ratio: 8.709005e-02	ci left: 4.622421e-04	ci right 5.045630e-04	k: 2024	n:4190000
Cons ci ratio: 7.767073e-04	ci left: 8.584065e-01	ci right 8.590737e-01	k: 3598122	n:4190000
KS ci ratio: 1.752972e-01	ci left: 1.088722e-04	ci right 1.300149e-04	k: 499	n:4190000
TEX15   4190000 perm   7638 sec   (549 perm/sec)   p_kst 1.190931e-04   p_cons 8.587403e-01   p_joint 4.830549e-04

Joint ci ratio: 8.698273e-02	ci left: 4.623061e-04	ci right 5.045780e-04	k: 2029	n:4200000
Cons ci ratio: 7.758090e-04	ci left: 8.583984e-01	ci right 8.590649e-01	k: 3606674	n:4200000
KS ci ratio: 1.751222e-01	ci left: 1.088407e-04	ci right 1.299539e-04	k: 500	n:4200000
TEX15   4200000 perm   7672 sec   (547 perm/sec)   p_kst 1.190476e-04   p_cons 8.587319e-01   p_joint 4.830952e-04

Joint ci ratio: 8.691854e-02	ci left: 4.619050e-04	ci right 5.041076e-04	k: 2032	n:4210000
Cons ci ratio: 7.748365e-04	ci left: 8.584147e-01	ci right 8.590803e-01	k: 3615328	n:4210000
KS ci ratio: 1.747737e-01	ci left: 1.090364e-04	ci right 1.301410e-04	k: 502	n:4210000
TEX15   4210000 perm   7707 sec   (546 perm/sec)   p_kst 1.192399e-04   p_cons 8.587477e-01   p_joint 4.826603e-04

Joint ci ratio: 8.681185e-02	ci left: 4.619696e-04	ci right 5.041236e-04	k: 2037	n:4220000
Cons ci ratio: 7.739938e-04	ci left: 8.583913e-01	ci right 8.590561e-01	k: 3623815	n:4220000
KS ci ratio: 1.742548e-01	ci left: 1.094579e-04	ci right 1.305746e-04	k: 505	n:4220000
TEX15   4220000 perm   7740 sec   (545 perm/sec)   p_kst 1.196682e-04   p_cons 8.587239e-01   p_joint 4.827014e-04

Joint ci ratio: 8.672679e-02	ci left: 4.618026e-04	ci right 5.038980e-04	k: 2041	n:4230000
Cons ci ratio: 7.730598e-04	ci left: 8.583975e-01	ci right 8.590616e-01	k: 3632427	n:4230000
KS ci ratio: 1.742548e-01	ci left: 1.091991e-04	ci right 1.302659e-04	k: 505	n:4230000
TEX15   4230000 perm   7774 sec   (544 perm/sec)   p_kst 1.193853e-04   p_cons 8.587298e-01   p_joint 4.825059e-04

Joint ci ratio: 8.664198e-02	ci left: 4.616363e-04	ci right 5.036734e-04	k: 2045	n:4240000
Cons ci ratio: 7.721381e-04	ci left: 8.584009e-01	ci right 8.590642e-01	k: 3641027	n:4240000
KS ci ratio: 1.740829e-01	ci left: 1.091671e-04	ci right 1.302048e-04	k: 506	n:4240000
TEX15   4240000 perm   7809 sec   (543 perm/sec)   p_kst 1.193396e-04   p_cons 8.587328e-01   p_joint 4.823113e-04

Joint ci ratio: 8.653631e-02	ci left: 4.617011e-04	ci right 5.036902e-04	k: 2050	n:4250000
Cons ci ratio: 7.712428e-04	ci left: 8.583970e-01	ci right 8.590595e-01	k: 3649596	n:4250000
KS ci ratio: 1.739115e-01	ci left: 1.091353e-04	ci right 1.301439e-04	k: 507	n:4250000
TEX15   4250000 perm   7843 sec   (542 perm/sec)   p_kst 1.192941e-04   p_cons 8.587285e-01   p_joint 4.823529e-04

Joint ci ratio: 8.632606e-02	ci left: 4.629140e-04	ci right 5.049059e-04	k: 2060	n:4260000
Cons ci ratio: 7.703656e-04	ci left: 8.583884e-01	ci right 8.590501e-01	k: 3658145	n:4260000
KS ci ratio: 1.734002e-01	ci left: 1.095528e-04	ci right 1.305732e-04	k: 510	n:4260000
TEX15   4260000 perm   7877 sec   (541 perm/sec)   p_kst 1.197183e-04   p_cons 8.587195e-01   p_joint 4.835681e-04

Joint ci ratio: 8.615898e-02	ci left: 4.636631e-04	ci right 5.056374e-04	k: 2068	n:4270000
Cons ci ratio: 7.694810e-04	ci left: 8.583831e-01	ci right 8.590441e-01	k: 3666708	n:4270000
KS ci ratio: 1.732308e-01	ci left: 1.095202e-04	ci right 1.305118e-04	k: 511	n:4270000
TEX15   4270000 perm   7910 sec   (540 perm/sec)   p_kst 1.196721e-04   p_cons 8.587138e-01   p_joint 4.843091e-04

Joint ci ratio: 8.607582e-02	ci left: 4.634942e-04	ci right 5.054107e-04	k: 2072	n:4280000
Cons ci ratio: 7.686327e-04	ci left: 8.583673e-01	ci right 8.590275e-01	k: 3675226	n:4280000
KS ci ratio: 1.732308e-01	ci left: 1.092643e-04	ci right 1.302069e-04	k: 511	n:4280000
TEX15   4280000 perm   7944 sec   (539 perm/sec)   p_kst 1.193925e-04   p_cons 8.586977e-01   p_joint 4.841121e-04

Joint ci ratio: 8.597220e-02	ci left: 4.635542e-04	ci right 5.054232e-04	k: 2077	n:4290000
Cons ci ratio: 7.677570e-04	ci left: 8.583612e-01	ci right 8.590206e-01	k: 3683785	n:4290000
KS ci ratio: 1.732308e-01	ci left: 1.090096e-04	ci right 1.299033e-04	k: 511	n:4290000
TEX15   4290000 perm   7978 sec   (538 perm/sec)   p_kst 1.191142e-04   p_cons 8.586911e-01   p_joint 4.841492e-04

Joint ci ratio: 8.586895e-02	ci left: 4.636140e-04	ci right 5.054355e-04	k: 2082	n:4300000
Cons ci ratio: 7.668262e-04	ci left: 8.583734e-01	ci right 8.590321e-01	k: 3692423	n:4300000
KS ci ratio: 1.730619e-01	ci left: 1.089786e-04	ci right 1.298439e-04	k: 512	n:4300000
TEX15   4300000 perm   8012 sec   (537 perm/sec)   p_kst 1.190698e-04   p_cons 8.587030e-01   p_joint 4.841860e-04

Joint ci ratio: 8.576608e-02	ci left: 4.636735e-04	ci right 5.054478e-04	k: 2087	n:4310000
Cons ci ratio: 7.659983e-04	ci left: 8.583541e-01	ci right 8.590120e-01	k: 3700925	n:4310000
KS ci ratio: 1.728935e-01	ci left: 1.089477e-04	ci right 1.297847e-04	k: 513	n:4310000
TEX15   4310000 perm   8045 sec   (536 perm/sec)   p_kst 1.190255e-04   p_cons 8.586833e-01   p_joint 4.842227e-04

Joint ci ratio: 8.566357e-02	ci left: 4.637328e-04	ci right 5.054600e-04	k: 2092	n:4320000
Cons ci ratio: 7.650870e-04	ci left: 8.583621e-01	ci right 8.590193e-01	k: 3709545	n:4320000
KS ci ratio: 1.728935e-01	ci left: 1.086955e-04	ci right 1.294842e-04	k: 513	n:4320000
TEX15   4320000 perm   8080 sec   (535 perm/sec)   p_kst 1.187500e-04   p_cons 8.586910e-01   p_joint 4.842593e-04

Joint ci ratio: 8.552066e-02	ci left: 4.642438e-04	ci right 5.059439e-04	k: 2099	n:4330000
Cons ci ratio: 7.642124e-04	ci left: 8.583595e-01	ci right 8.590160e-01	k: 3718119	n:4330000
KS ci ratio: 1.725581e-01	ci left: 1.088864e-04	ci right 1.296670e-04	k: 515	n:4330000
TEX15   4330000 perm   8115 sec   (534 perm/sec)   p_kst 1.189376e-04   p_cons 8.586880e-01   p_joint 4.847575e-04

Joint ci ratio: 8.541903e-02	ci left: 4.643016e-04	ci right 5.059548e-04	k: 2104	n:4340000
Cons ci ratio: 7.633633e-04	ci left: 8.583498e-01	ci right 8.590055e-01	k: 3726662	n:4340000
KS ci ratio: 1.725581e-01	ci left: 1.086355e-04	ci right 1.293683e-04	k: 515	n:4340000
TEX15   4340000 perm   8150 sec   (532 perm/sec)   p_kst 1.186636e-04   p_cons 8.586779e-01   p_joint 4.847926e-04

Joint ci ratio: 8.529754e-02	ci left: 4.645841e-04	ci right 5.062004e-04	k: 2110	n:4350000
Cons ci ratio: 7.624672e-04	ci left: 8.583560e-01	ci right 8.590109e-01	k: 3735274	n:4350000
KS ci ratio: 1.723911e-01	ci left: 1.086058e-04	ci right 1.293107e-04	k: 516	n:4350000
TEX15   4350000 perm   8185 sec   (531 perm/sec)   p_kst 1.186207e-04   p_cons 8.586837e-01   p_joint 4.850575e-04

Joint ci ratio: 8.521685e-02	ci left: 4.644164e-04	ci right 5.059764e-04	k: 2114	n:4360000
Cons ci ratio: 7.615835e-04	ci left: 8.583591e-01	ci right 8.590133e-01	k: 3743873	n:4360000
KS ci ratio: 1.723912e-01	ci left: 1.083567e-04	ci right 1.290141e-04	k: 516	n:4360000
TEX15   4360000 perm   8220 sec   (530 perm/sec)   p_kst 1.183486e-04   p_cons 8.586865e-01   p_joint 4.848624e-04

Joint ci ratio: 8.509622e-02	ci left: 4.646974e-04	ci right 5.062208e-04	k: 2120	n:4370000
Cons ci ratio: 7.607036e-04	ci left: 8.583621e-01	ci right 8.590155e-01	k: 3752471	n:4370000
KS ci ratio: 1.720587e-01	ci left: 1.085467e-04	ci right 1.291962e-04	k: 518	n:4370000
TEX15   4370000 perm   8256 sec   (529 perm/sec)   p_kst 1.185355e-04   p_cons 8.586890e-01   p_joint 4.851259e-04

Joint ci ratio: 8.499609e-02	ci left: 4.647538e-04	ci right 5.062309e-04	k: 2125	n:4380000
Cons ci ratio: 7.598376e-04	ci left: 8.583616e-01	ci right 8.590142e-01	k: 3761054	n:4380000
KS ci ratio: 1.717281e-01	ci left: 1.087358e-04	ci right 1.293775e-04	k: 520	n:4380000
TEX15   4380000 perm   8292 sec   (528 perm/sec)   p_kst 1.187215e-04   p_cons 8.586881e-01   p_joint 4.851598e-04

Joint ci ratio: 8.485649e-02	ci left: 4.652558e-04	ci right 5.067061e-04	k: 2132	n:4390000
Cons ci ratio: 7.589837e-04	ci left: 8.583581e-01	ci right 8.590100e-01	k: 3769624	n:4390000
KS ci ratio: 1.715635e-01	ci left: 1.087061e-04	ci right 1.293204e-04	k: 521	n:4390000
TEX15   4390000 perm   8327 sec   (527 perm/sec)   p_kst 1.186788e-04   p_cons 8.586843e-01   p_joint 4.856492e-04

Joint ci ratio: 8.475721e-02	ci left: 4.653106e-04	ci right 5.067149e-04	k: 2137	n:4400000
Cons ci ratio: 7.580901e-04	ci left: 8.583683e-01	ci right 8.590194e-01	k: 3778254	n:4400000
KS ci ratio: 1.713994e-01	ci left: 1.086766e-04	ci right 1.292635e-04	k: 522	n:4400000
TEX15   4400000 perm   8362 sec   (526 perm/sec)   p_kst 1.186364e-04   p_cons 8.586941e-01   p_joint 4.856818e-04

Joint ci ratio: 8.467804e-02	ci left: 4.651433e-04	ci right 5.064922e-04	k: 2141	n:4410000
Cons ci ratio: 7.572201e-04	ci left: 8.583718e-01	ci right 8.590223e-01	k: 3786855	n:4410000
KS ci ratio: 1.713994e-01	ci left: 1.084301e-04	ci right 1.289704e-04	k: 522	n:4410000
TEX15   4410000 perm   8398 sec   (525 perm/sec)   p_kst 1.183673e-04   p_cons 8.586973e-01   p_joint 4.854875e-04

Joint ci ratio: 8.461882e-02	ci left: 4.647553e-04	ci right 5.060394e-04	k: 2144	n:4420000
Cons ci ratio: 7.563679e-04	ci left: 8.583706e-01	ci right 8.590203e-01	k: 3795435	n:4420000
KS ci ratio: 1.710726e-01	ci left: 1.086179e-04	ci right 1.291504e-04	k: 524	n:4420000
TEX15   4420000 perm   8434 sec   (524 perm/sec)   p_kst 1.185520e-04   p_cons 8.586957e-01   p_joint 4.850679e-04

Joint ci ratio: 8.455973e-02	ci left: 4.643691e-04	ci right 5.055886e-04	k: 2147	n:4430000
Cons ci ratio: 7.555454e-04	ci left: 8.583608e-01	ci right 8.590098e-01	k: 3803977	n:4430000
KS ci ratio: 1.709100e-01	ci left: 1.085888e-04	ci right 1.290943e-04	k: 525	n:4430000
TEX15   4430000 perm   8471 sec   (523 perm/sec)   p_kst 1.185102e-04   p_cons 8.586856e-01   p_joint 4.846501e-04

Joint ci ratio: 8.444186e-02	ci left: 4.646460e-04	ci right 5.058298e-04	k: 2153	n:4440000
Cons ci ratio: 7.547262e-04	ci left: 8.583509e-01	ci right 8.589991e-01	k: 3812518	n:4440000
KS ci ratio: 1.705859e-01	ci left: 1.087754e-04	ci right 1.292732e-04	k: 527	n:4440000
TEX15   4440000 perm   8506 sec   (522 perm/sec)   p_kst 1.186937e-04   p_cons 8.586752e-01   p_joint 4.849099e-04

Joint ci ratio: 8.438314e-02	ci left: 4.642618e-04	ci right 5.053815e-04	k: 2156	n:4450000
Cons ci ratio: 7.538608e-04	ci left: 8.583567e-01	ci right 8.590042e-01	k: 3821129	n:4450000
KS ci ratio: 1.705860e-01	ci left: 1.085310e-04	ci right 1.289827e-04	k: 527	n:4450000
TEX15   4450000 perm   8542 sec   (521 perm/sec)   p_kst 1.184270e-04   p_cons 8.586807e-01   p_joint 4.844944e-04

Joint ci ratio: 8.426601e-02	ci left: 4.645378e-04	ci right 5.056220e-04	k: 2162	n:4460000
Cons ci ratio: 7.529608e-04	ci left: 8.583746e-01	ci right 8.590214e-01	k: 3829794	n:4460000
KS ci ratio: 1.704247e-01	ci left: 1.085023e-04	ci right 1.289273e-04	k: 528	n:4460000
TEX15   4460000 perm   8577 sec   (520 perm/sec)   p_kst 1.183857e-04   p_cons 8.586982e-01   p_joint 4.847534e-04

Joint ci ratio: 8.424657e-02	ci left: 4.637175e-04	ci right 5.047193e-04	k: 2163	n:4470000
Cons ci ratio: 7.520882e-04	ci left: 8.583846e-01	ci right 8.590306e-01	k: 3838424	n:4470000
KS ci ratio: 1.704247e-01	ci left: 1.082596e-04	ci right 1.286389e-04	k: 528	n:4470000
TEX15   4470000 perm   8613 sec   (519 perm/sec)   p_kst 1.181208e-04   p_cons 8.587078e-01   p_joint 4.838926e-04

Joint ci ratio: 8.411062e-02	ci left: 4.642121e-04	ci right 5.051880e-04	k: 2170	n:4480000
Cons ci ratio: 7.512457e-04	ci left: 8.583858e-01	ci right 8.590311e-01	k: 3847015	n:4480000
KS ci ratio: 1.702638e-01	ci left: 1.082316e-04	ci right 1.285844e-04	k: 529	n:4480000
TEX15   4480000 perm   8649 sec   (518 perm/sec)   p_kst 1.180804e-04   p_cons 8.587087e-01   p_joint 4.843750e-04

Joint ci ratio: 8.401393e-02	ci left: 4.642684e-04	ci right 5.051999e-04	k: 2175	n:4490000
Cons ci ratio: 7.504204e-04	ci left: 8.583824e-01	ci right 8.590270e-01	k: 3855585	n:4490000
KS ci ratio: 1.696249e-01	ci left: 1.088436e-04	ci right 1.292268e-04	k: 533	n:4490000
TEX15   4490000 perm   8685 sec   (517 perm/sec)   p_kst 1.187082e-04   p_cons 8.587049e-01   p_joint 4.844098e-04

Joint ci ratio: 8.382150e-02	ci left: 4.654123e-04	ci right 5.063461e-04	k: 2185	n:4500000
Cons ci ratio: 7.495758e-04	ci left: 8.583861e-01	ci right 8.590299e-01	k: 3864187	n:4500000
KS ci ratio: 1.694663e-01	ci left: 1.088145e-04	ci right 1.291713e-04	k: 534	n:4500000
TEX15   4500000 perm   8720 sec   (516 perm/sec)   p_kst 1.186667e-04   p_cons 8.587082e-01   p_joint 4.855556e-04

Joint ci ratio: 8.378321e-02	ci left: 4.648145e-04	ci right 5.056761e-04	k: 2187	n:4510000
Cons ci ratio: 7.487383e-04	ci left: 8.583884e-01	ci right 8.590315e-01	k: 3872783	n:4510000
KS ci ratio: 1.694663e-01	ci left: 1.085732e-04	ci right 1.288848e-04	k: 534	n:4510000
TEX15   4510000 perm   8756 sec   (515 perm/sec)   p_kst 1.184035e-04   p_cons 8.587102e-01   p_joint 4.849224e-04

Joint ci ratio: 8.363043e-02	ci left: 4.655190e-04	ci right 5.063643e-04	k: 2195	n:4520000
Cons ci ratio: 7.479390e-04	ci left: 8.583792e-01	ci right 8.590217e-01	k: 3881327	n:4520000
KS ci ratio: 1.689931e-01	ci left: 1.089686e-04	ci right 1.292915e-04	k: 537	n:4520000
TEX15   4520000 perm   8793 sec   (514 perm/sec)   p_kst 1.188053e-04   p_cons 8.587007e-01   p_joint 4.856195e-04

Joint ci ratio: 8.355438e-02	ci left: 4.653559e-04	ci right 5.061479e-04	k: 2199	n:4530000
Cons ci ratio: 7.471333e-04	ci left: 8.583729e-01	ci right 8.590147e-01	k: 3889884	n:4530000
KS ci ratio: 1.689931e-01	ci left: 1.087280e-04	ci right 1.290061e-04	k: 537	n:4530000
TEX15   4530000 perm   8829 sec   (513 perm/sec)   p_kst 1.185430e-04   p_cons 8.586940e-01   p_joint 4.854305e-04

Joint ci ratio: 8.347853e-02	ci left: 4.651935e-04	ci right 5.059325e-04	k: 2203	n:4540000
Cons ci ratio: 7.463188e-04	ci left: 8.583704e-01	ci right 8.590115e-01	k: 3898458	n:4540000
KS ci ratio: 1.689932e-01	ci left: 1.084886e-04	ci right 1.287219e-04	k: 537	n:4540000
TEX15   4540000 perm   8865 sec   (512 perm/sec)   p_kst 1.182819e-04   p_cons 8.586912e-01   p_joint 4.852423e-04

Joint ci ratio: 8.340289e-02	ci left: 4.650319e-04	ci right 5.057181e-04	k: 2207	n:4550000
Cons ci ratio: 7.455151e-04	ci left: 8.583653e-01	ci right 8.590057e-01	k: 3907020	n:4550000
KS ci ratio: 1.689932e-01	ci left: 1.082501e-04	ci right 1.284390e-04	k: 537	n:4550000
TEX15   4550000 perm   8902 sec   (511 perm/sec)   p_kst 1.180220e-04   p_cons 8.586857e-01   p_joint 4.850549e-04

Joint ci ratio: 8.338404e-02	ci left: 4.642268e-04	ci right 5.048329e-04	k: 2208	n:4560000
Cons ci ratio: 7.447018e-04	ci left: 8.583641e-01	ci right 8.590038e-01	k: 3915600	n:4560000
KS ci ratio: 1.689932e-01	ci left: 1.080127e-04	ci right 1.281574e-04	k: 537	n:4560000
TEX15   4560000 perm   8940 sec   (510 perm/sec)   p_kst 1.177632e-04   p_cons 8.586842e-01   p_joint 4.842105e-04

Joint ci ratio: 8.330866e-02	ci left: 4.640680e-04	ci right 5.046217e-04	k: 2212	n:4570000
Cons ci ratio: 7.438851e-04	ci left: 8.583650e-01	ci right 8.590039e-01	k: 3924189	n:4570000
KS ci ratio: 1.688364e-01	ci left: 1.079859e-04	ci right 1.281050e-04	k: 538	n:4570000
TEX15   4570000 perm   8977 sec   (509 perm/sec)   p_kst 1.177243e-04   p_cons 8.586847e-01   p_joint 4.840263e-04

Joint ci ratio: 8.317719e-02	ci left: 4.645514e-04	ci right 5.050801e-04	k: 2219	n:4580000
Cons ci ratio: 7.430491e-04	ci left: 8.583730e-01	ci right 8.590113e-01	k: 3932811	n:4580000
KS ci ratio: 1.688364e-01	ci left: 1.077502e-04	ci right 1.278253e-04	k: 538	n:4580000
TEX15   4580000 perm   9014 sec   (508 perm/sec)   p_kst 1.174672e-04   p_cons 8.586924e-01   p_joint 4.844978e-04

Joint ci ratio: 8.310237e-02	ci left: 4.643926e-04	ci right 5.048693e-04	k: 2223	n:4590000
Cons ci ratio: 7.422272e-04	ci left: 8.583773e-01	ci right 8.590148e-01	k: 3941416	n:4590000
KS ci ratio: 1.685240e-01	ci left: 1.079328e-04	ci right 1.280009e-04	k: 540	n:4590000
TEX15   4590000 perm   9052 sec   (507 perm/sec)   p_kst 1.176471e-04   p_cons 8.586963e-01   p_joint 4.843137e-04

Joint ci ratio: 8.300911e-02	ci left: 4.644474e-04	ci right 5.048813e-04	k: 2228	n:4600000
Cons ci ratio: 7.414046e-04	ci left: 8.583827e-01	ci right 8.590195e-01	k: 3950026	n:4600000
KS ci ratio: 1.680587e-01	ci left: 1.083228e-04	ci right 1.284023e-04	k: 543	n:4600000
TEX15   4600000 perm   9091 sec   (506 perm/sec)   p_kst 1.180435e-04   p_cons 8.587013e-01   p_joint 4.843478e-04

Joint ci ratio: 8.295332e-02	ci left: 4.640772e-04	ci right 5.044504e-04	k: 2231	n:4610000
Cons ci ratio: 7.406365e-04	ci left: 8.583711e-01	ci right 8.590072e-01	k: 3958558	n:4610000
KS ci ratio: 1.679044e-01	ci left: 1.082956e-04	ci right 1.283498e-04	k: 544	n:4610000
TEX15   4610000 perm   9129 sec   (505 perm/sec)   p_kst 1.180043e-04   p_cons 8.586894e-01   p_joint 4.839479e-04

Joint ci ratio: 8.287909e-02	ci left: 4.639206e-04	ci right 5.042422e-04	k: 2235	n:4620000
Cons ci ratio: 7.398839e-04	ci left: 8.583552e-01	ci right 8.589907e-01	k: 3967070	n:4620000
KS ci ratio: 1.677506e-01	ci left: 1.082686e-04	ci right 1.282975e-04	k: 545	n:4620000
TEX15   4620000 perm   9167 sec   (504 perm/sec)   p_kst 1.179654e-04   p_cons 8.586732e-01   p_joint 4.837662e-04

Joint ci ratio: 8.278658e-02	ci left: 4.639761e-04	ci right 5.042555e-04	k: 2240	n:4630000
Cons ci ratio: 7.390856e-04	ci left: 8.583551e-01	ci right 8.589900e-01	k: 3975655	n:4630000
KS ci ratio: 1.675972e-01	ci left: 1.082417e-04	ci right 1.282454e-04	k: 546	n:4630000
TEX15   4630000 perm   9205 sec   (503 perm/sec)   p_kst 1.179266e-04   p_cons 8.586728e-01   p_joint 4.838013e-04

Joint ci ratio: 8.267597e-02	ci left: 4.642425e-04	ci right 5.044885e-04	k: 2246	n:4640000
Cons ci ratio: 7.382984e-04	ci left: 8.583523e-01	ci right 8.589865e-01	k: 3984227	n:4640000
KS ci ratio: 1.675972e-01	ci left: 1.080084e-04	ci right 1.279690e-04	k: 546	n:4640000
TEX15   4640000 perm   9243 sec   (502 perm/sec)   p_kst 1.176724e-04   p_cons 8.586696e-01   p_joint 4.840517e-04

Joint ci ratio: 8.262085e-02	ci left: 4.638760e-04	ci right 5.040621e-04	k: 2249	n:4650000
Cons ci ratio: 7.374739e-04	ci left: 8.583626e-01	ci right 8.589961e-01	k: 3992860	n:4650000
KS ci ratio: 1.674442e-01	ci left: 1.079822e-04	ci right 1.279179e-04	k: 547	n:4650000
TEX15   4650000 perm   9281 sec   (501 perm/sec)   p_kst 1.176344e-04   p_cons 8.586796e-01   p_joint 4.836559e-04

Joint ci ratio: 8.252920e-02	ci left: 4.639313e-04	ci right 5.040755e-04	k: 2254	n:4660000
Cons ci ratio: 7.367205e-04	ci left: 8.583503e-01	ci right 8.589831e-01	k: 4001388	n:4660000
KS ci ratio: 1.674442e-01	ci left: 1.077504e-04	ci right 1.276434e-04	k: 547	n:4660000
TEX15   4660000 perm   9320 sec   (500 perm/sec)   p_kst 1.173820e-04   p_cons 8.586670e-01   p_joint 4.836910e-04

Joint ci ratio: 8.241961e-02	ci left: 4.641962e-04	ci right 5.043074e-04	k: 2260	n:4670000
Cons ci ratio: 7.359129e-04	ci left: 8.583567e-01	ci right 8.589889e-01	k: 4010003	n:4670000
KS ci ratio: 1.672917e-01	ci left: 1.077249e-04	ci right 1.275932e-04	k: 548	n:4670000
TEX15   4670000 perm   9358 sec   (499 perm/sec)   p_kst 1.173448e-04   p_cons 8.586730e-01   p_joint 4.839400e-04

Joint ci ratio: 8.231046e-02	ci left: 4.644600e-04	ci right 5.045383e-04	k: 2266	n:4680000
Cons ci ratio: 7.351163e-04	ci left: 8.583603e-01	ci right 8.589918e-01	k: 4018605	n:4680000
KS ci ratio: 1.669878e-01	ci left: 1.079042e-04	ci right 1.277657e-04	k: 550	n:4680000
TEX15   4680000 perm   9396 sec   (498 perm/sec)   p_kst 1.175214e-04   p_cons 8.586763e-01   p_joint 4.841880e-04

Joint ci ratio: 8.221984e-02	ci left: 4.645138e-04	ci right 5.045506e-04	k: 2271	n:4690000
Cons ci ratio: 7.343333e-04	ci left: 8.583603e-01	ci right 8.589911e-01	k: 4027190	n:4690000
KS ci ratio: 1.666855e-01	ci left: 1.080827e-04	ci right 1.279375e-04	k: 552	n:4690000
TEX15   4690000 perm   9434 sec   (497 perm/sec)   p_kst 1.176972e-04   p_cons 8.586759e-01   p_joint 4.842217e-04

Joint ci ratio: 8.207544e-02	ci left: 4.651927e-04	ci right 5.052141e-04	k: 2279	n:4700000
Cons ci ratio: 7.335400e-04	ci left: 8.583645e-01	ci right 8.589946e-01	k: 4035795	n:4700000
KS ci ratio: 1.663849e-01	ci left: 1.082606e-04	ci right 1.281086e-04	k: 554	n:4700000
TEX15   4700000 perm   9472 sec   (496 perm/sec)   p_kst 1.178723e-04   p_cons 8.586798e-01   p_joint 4.848936e-04

Joint ci ratio: 8.196765e-02	ci left: 4.654528e-04	ci right 5.054415e-04	k: 2285	n:4710000
Cons ci ratio: 7.327659e-04	ci left: 8.583632e-01	ci right 8.589926e-01	k: 4044374	n:4710000
KS ci ratio: 1.662352e-01	ci left: 1.082342e-04	ci right 1.280577e-04	k: 555	n:4710000
TEX15   4710000 perm   9511 sec   (495 perm/sec)   p_kst 1.178344e-04   p_cons 8.586781e-01   p_joint 4.851380e-04

Joint ci ratio: 8.184242e-02	ci left: 4.659193e-04	ci right 5.058841e-04	k: 2292	n:4720000
Cons ci ratio: 7.320255e-04	ci left: 8.583515e-01	ci right 8.589803e-01	k: 4052904	n:4720000
KS ci ratio: 1.660859e-01	ci left: 1.082079e-04	ci right 1.280071e-04	k: 556	n:4720000
TEX15   4720000 perm   9551 sec   (494 perm/sec)   p_kst 1.177966e-04   p_cons 8.586661e-01   p_joint 4.855932e-04

Joint ci ratio: 8.173555e-02	ci left: 4.661768e-04	ci right 5.061090e-04	k: 2298	n:4730000
Cons ci ratio: 7.312218e-04	ci left: 8.583616e-01	ci right 8.589897e-01	k: 4061537	n:4730000
KS ci ratio: 1.654927e-01	ci left: 1.087897e-04	ci right 1.286172e-04	k: 560	n:4730000
TEX15   4730000 perm   9590 sec   (493 perm/sec)   p_kst 1.183932e-04   p_cons 8.586759e-01   p_joint 4.858351e-04

Joint ci ratio: 8.162909e-02	ci left: 4.664333e-04	ci right 5.063329e-04	k: 2304	n:4740000
Cons ci ratio: 7.304486e-04	ci left: 8.583624e-01	ci right 8.589899e-01	k: 4070126	n:4740000
KS ci ratio: 1.654927e-01	ci left: 1.085602e-04	ci right 1.283458e-04	k: 560	n:4740000
TEX15   4740000 perm   9628 sec   (492 perm/sec)   p_kst 1.181435e-04   p_cons 8.586764e-01   p_joint 4.860759e-04

Joint ci ratio: 8.155836e-02	ci left: 4.662763e-04	ci right 5.061262e-04	k: 2308	n:4750000
Cons ci ratio: 7.296773e-04	ci left: 8.583635e-01	ci right 8.589902e-01	k: 4078716	n:4750000
KS ci ratio: 1.654927e-01	ci left: 1.083317e-04	ci right 1.280756e-04	k: 560	n:4750000
TEX15   4750000 perm   9667 sec   (491 perm/sec)   p_kst 1.178947e-04   p_cons 8.586771e-01   p_joint 4.858947e-04

Joint ci ratio: 8.150544e-02	ci left: 4.659141e-04	ci right 5.057060e-04	k: 2311	n:4760000
Cons ci ratio: 7.288989e-04	ci left: 8.583676e-01	ci right 8.589937e-01	k: 4087321	n:4760000
KS ci ratio: 1.653454e-01	ci left: 1.083055e-04	ci right 1.280253e-04	k: 561	n:4760000
TEX15   4760000 perm   9705 sec   (490 perm/sec)   p_kst 1.178571e-04   p_cons 8.586809e-01   p_joint 4.855042e-04

Joint ci ratio: 8.143503e-02	ci left: 4.657588e-04	ci right 5.055015e-04	k: 2315	n:4770000
Cons ci ratio: 7.281588e-04	ci left: 8.583598e-01	ci right 8.589853e-01	k: 4095869	n:4770000
KS ci ratio: 1.651985e-01	ci left: 1.082794e-04	ci right 1.279753e-04	k: 562	n:4770000
TEX15   4770000 perm   9745 sec   (489 perm/sec)   p_kst 1.178197e-04   p_cons 8.586727e-01   p_joint 4.853249e-04

Joint ci ratio: 8.138236e-02	ci left: 4.653993e-04	ci right 5.050844e-04	k: 2318	n:4780000
Cons ci ratio: 7.274048e-04	ci left: 8.583575e-01	ci right 8.589823e-01	k: 4104443	n:4780000
KS ci ratio: 1.650520e-01	ci left: 1.082534e-04	ci right 1.279254e-04	k: 563	n:4780000
TEX15   4780000 perm   9784 sec   (489 perm/sec)   p_kst 1.177824e-04   p_cons 8.586701e-01   p_joint 4.849372e-04

Joint ci ratio: 8.129476e-02	ci left: 4.654503e-04	ci right 5.050950e-04	k: 2323	n:4790000
Cons ci ratio: 7.266649e-04	ci left: 8.583512e-01	ci right 8.589753e-01	k: 4112998	n:4790000
KS ci ratio: 1.649059e-01	ci left: 1.082276e-04	ci right 1.278757e-04	k: 564	n:4790000
TEX15   4790000 perm   9824 sec   (488 perm/sec)   p_kst 1.177453e-04   p_cons 8.586635e-01   p_joint 4.849687e-04

Joint ci ratio: 8.115518e-02	ci left: 4.661134e-04	ci right 5.057432e-04	k: 2331	n:4800000
Cons ci ratio: 7.259497e-04	ci left: 8.583374e-01	ci right 8.589609e-01	k: 4121517	n:4800000
KS ci ratio: 1.644698e-01	ci left: 1.086014e-04	ci right 1.282600e-04	k: 567	n:4800000
TEX15   4800000 perm   9863 sec   (487 perm/sec)   p_kst 1.181250e-04   p_cons 8.586494e-01   p_joint 4.856250e-04

Joint ci ratio: 8.096440e-02	ci left: 4.673849e-04	ci right 5.070250e-04	k: 2342	n:4810000
Cons ci ratio: 7.251813e-04	ci left: 8.583422e-01	ci right 8.589651e-01	k: 4130125	n:4810000
KS ci ratio: 1.643252e-01	ci left: 1.085749e-04	ci right 1.282098e-04	k: 568	n:4810000
TEX15   4810000 perm   9903 sec   (486 perm/sec)   p_kst 1.180873e-04   p_cons 8.586538e-01   p_joint 4.869023e-04

Joint ci ratio: 8.084370e-02	ci left: 4.678381e-04	ci right 5.074547e-04	k: 2349	n:4820000
Cons ci ratio: 7.244123e-04	ci left: 8.583480e-01	ci right 8.589702e-01	k: 4138738	n:4820000
KS ci ratio: 1.643252e-01	ci left: 1.083497e-04	ci right 1.279438e-04	k: 568	n:4820000
TEX15   4820000 perm   9943 sec   (485 perm/sec)   p_kst 1.178423e-04   p_cons 8.586593e-01   p_joint 4.873444e-04

Joint ci ratio: 8.075783e-02	ci left: 4.678838e-04	ci right 5.074602e-04	k: 2354	n:4830000
Cons ci ratio: 7.236512e-04	ci left: 8.583519e-01	ci right 8.589735e-01	k: 4147342	n:4830000
KS ci ratio: 1.640372e-01	ci left: 1.085224e-04	ci right 1.281100e-04	k: 570	n:4830000
TEX15   4830000 perm   9983 sec   (484 perm/sec)   p_kst 1.180124e-04   p_cons 8.586629e-01   p_joint 4.873706e-04

Joint ci ratio: 8.067224e-02	ci left: 4.679293e-04	ci right 5.074656e-04	k: 2359	n:4840000
Cons ci ratio: 7.228796e-04	ci left: 8.583602e-01	ci right 8.589811e-01	k: 4155967	n:4840000
KS ci ratio: 1.637506e-01	ci left: 1.086945e-04	ci right 1.282755e-04	k: 572	n:4840000
TEX15   4840000 perm   10023 sec   (483 perm/sec)   p_kst 1.181818e-04   p_cons 8.586709e-01   p_joint 4.873967e-04

Joint ci ratio: 8.056988e-02	ci left: 4.681767e-04	ci right 5.076814e-04	k: 2365	n:4850000
Cons ci ratio: 7.221461e-04	ci left: 8.583565e-01	ci right 8.589767e-01	k: 4164534	n:4850000
KS ci ratio: 1.636079e-01	ci left: 1.086681e-04	ci right 1.282256e-04	k: 573	n:4850000
TEX15   4850000 perm   10063 sec   (482 perm/sec)   p_kst 1.181443e-04   p_cons 8.586668e-01   p_joint 4.876289e-04

Joint ci ratio: 8.045094e-02	ci left: 4.686247e-04	ci right 5.081061e-04	k: 2372	n:4860000
Cons ci ratio: 7.213916e-04	ci left: 8.583605e-01	ci right 8.589802e-01	k: 4173139	n:4860000
KS ci ratio: 1.634656e-01	ci left: 1.086418e-04	ci right 1.281759e-04	k: 574	n:4860000
TEX15   4860000 perm   10101 sec   (481 perm/sec)   p_kst 1.181070e-04   p_cons 8.586706e-01   p_joint 4.880658e-04

Joint ci ratio: 8.036631e-02	ci left: 4.686685e-04	ci right 5.081101e-04	k: 2377	n:4870000
Cons ci ratio: 7.206565e-04	ci left: 8.583589e-01	ci right 8.589779e-01	k: 4181716	n:4870000
KS ci ratio: 1.633237e-01	ci left: 1.086157e-04	ci right 1.281265e-04	k: 575	n:4870000
TEX15   4870000 perm   10140 sec   (480 perm/sec)   p_kst 1.180698e-04   p_cons 8.586686e-01   p_joint 4.880903e-04

Joint ci ratio: 8.029881e-02	ci left: 4.685113e-04	ci right 5.079050e-04	k: 2381	n:4880000
Cons ci ratio: 7.199078e-04	ci left: 8.583625e-01	ci right 8.589809e-01	k: 4190319	n:4880000
KS ci ratio: 1.631821e-01	ci left: 1.085897e-04	ci right 1.280772e-04	k: 576	n:4880000
TEX15   4880000 perm   10179 sec   (479 perm/sec)   p_kst 1.180328e-04   p_cons 8.586719e-01   p_joint 4.879098e-04

Joint ci ratio: 8.026515e-02	ci left: 4.679540e-04	ci right 5.072835e-04	k: 2383	n:4890000
Cons ci ratio: 7.191318e-04	ci left: 8.583762e-01	ci right 8.589939e-01	k: 4198971	n:4890000
KS ci ratio: 1.631821e-01	ci left: 1.083676e-04	ci right 1.278153e-04	k: 576	n:4890000
TEX15   4890000 perm   10218 sec   (479 perm/sec)   p_kst 1.177914e-04   p_cons 8.586853e-01   p_joint 4.873211e-04

Joint ci ratio: 8.019790e-02	ci left: 4.677989e-04	ci right 5.070810e-04	k: 2387	n:4900000
Cons ci ratio: 7.184259e-04	ci left: 8.583670e-01	ci right 8.589840e-01	k: 4207511	n:4900000
KS ci ratio: 1.630409e-01	ci left: 1.083422e-04	ci right 1.277668e-04	k: 577	n:4900000
TEX15   4900000 perm   10257 sec   (478 perm/sec)   p_kst 1.177551e-04   p_cons 8.586757e-01   p_joint 4.871429e-04

Joint ci ratio: 8.003047e-02	ci left: 4.688421e-04	ci right 5.081257e-04	k: 2397	n:4910000
Cons ci ratio: 7.176938e-04	ci left: 8.583673e-01	ci right 8.589838e-01	k: 4216098	n:4910000
KS ci ratio: 1.630409e-01	ci left: 1.081215e-04	ci right 1.275066e-04	k: 577	n:4910000
TEX15   4910000 perm   10297 sec   (477 perm/sec)   p_kst 1.175153e-04   p_cons 8.586758e-01   p_joint 4.881874e-04

Joint ci ratio: 7.993052e-02	ci left: 4.690842e-04	ci right 5.083368e-04	k: 2403	n:4920000
Cons ci ratio: 7.169825e-04	ci left: 8.583614e-01	ci right 8.589772e-01	k: 4224654	n:4920000
KS ci ratio: 1.627595e-01	ci left: 1.082917e-04	ci right 1.276705e-04	k: 579	n:4920000
TEX15   4920000 perm   10338 sec   (476 perm/sec)   p_kst 1.176829e-04   p_cons 8.586695e-01   p_joint 4.884146e-04

Joint ci ratio: 7.983096e-02	ci left: 4.693255e-04	ci right 5.085470e-04	k: 2409	n:4930000
Cons ci ratio: 7.162979e-04	ci left: 8.583471e-01	ci right 8.589624e-01	k: 4233169	n:4930000
KS ci ratio: 1.627595e-01	ci left: 1.080720e-04	ci right 1.274116e-04	k: 579	n:4930000
TEX15   4930000 perm   10378 sec   (475 perm/sec)   p_kst 1.174442e-04   p_cons 8.586550e-01   p_joint 4.886410e-04

Joint ci ratio: 7.979787e-02	ci left: 4.687722e-04	ci right 5.079305e-04	k: 2411	n:4940000
Cons ci ratio: 7.155812e-04	ci left: 8.583445e-01	ci right 8.589591e-01	k: 4241741	n:4940000
KS ci ratio: 1.627596e-01	ci left: 1.078533e-04	ci right 1.271536e-04	k: 579	n:4940000
TEX15   4940000 perm   10418 sec   (474 perm/sec)   p_kst 1.172065e-04   p_cons 8.586520e-01   p_joint 4.880567e-04

Joint ci ratio: 7.969880e-02	ci left: 4.690131e-04	ci right 5.081407e-04	k: 2417	n:4950000
Cons ci ratio: 7.148684e-04	ci left: 8.583413e-01	ci right 8.589553e-01	k: 4250310	n:4950000
KS ci ratio: 1.626194e-01	ci left: 1.078292e-04	ci right 1.271070e-04	k: 580	n:4950000
TEX15   4950000 perm   10458 sec   (473 perm/sec)   p_kst 1.171717e-04   p_cons 8.586485e-01   p_joint 4.882828e-04

Joint ci ratio: 7.964942e-02	ci left: 4.686603e-04	ci right 5.077331e-04	k: 2420	n:4960000
Cons ci ratio: 7.141068e-04	ci left: 8.583554e-01	ci right 8.589688e-01	k: 4258965	n:4960000
KS ci ratio: 1.626195e-01	ci left: 1.076118e-04	ci right 1.268507e-04	k: 580	n:4960000
TEX15   4960000 perm   10499 sec   (472 perm/sec)   p_kst 1.169355e-04   p_cons 8.586623e-01   p_joint 4.879032e-04

Joint ci ratio: 7.953450e-02	ci left: 4.690978e-04	ci right 5.081480e-04	k: 2427	n:4970000
Cons ci ratio: 7.133535e-04	ci left: 8.583675e-01	ci right 8.589802e-01	k: 4267610	n:4970000
KS ci ratio: 1.622012e-01	ci left: 1.079743e-04	ci right 1.272236e-04	k: 583	n:4970000
TEX15   4970000 perm   10539 sec   (472 perm/sec)   p_kst 1.173038e-04   p_cons 8.586740e-01   p_joint 4.883300e-04

Joint ci ratio: 7.946908e-02	ci left: 4.689431e-04	ci right 5.079468e-04	k: 2431	n:4980000
Cons ci ratio: 7.126220e-04	ci left: 8.583729e-01	ci right 8.589850e-01	k: 4276222	n:4980000
KS ci ratio: 1.620625e-01	ci left: 1.079502e-04	ci right 1.271771e-04	k: 584	n:4980000
TEX15   4980000 perm   10578 sec   (471 perm/sec)   p_kst 1.172691e-04   p_cons 8.586791e-01   p_joint 4.881526e-04

Joint ci ratio: 7.937122e-02	ci left: 4.691818e-04	ci right 5.081551e-04	k: 2437	n:4990000
Cons ci ratio: 7.119210e-04	ci left: 8.583686e-01	ci right 8.589801e-01	k: 4284786	n:4990000
KS ci ratio: 1.617862e-01	ci left: 1.081184e-04	ci right 1.273393e-04	k: 586	n:4990000
TEX15   4990000 perm   10618 sec   (470 perm/sec)   p_kst 1.174349e-04   p_cons 8.586745e-01   p_joint 4.883768e-04

Joint ci ratio: 7.927372e-02	ci left: 4.694197e-04	ci right 5.083626e-04	k: 2443	n:5000000
Cons ci ratio: 7.112297e-04	ci left: 8.583617e-01	ci right 8.589726e-01	k: 4293337	n:5000000
KS ci ratio: 1.616486e-01	ci left: 1.080941e-04	ci right 1.272927e-04	k: 587	n:5000000
TEX15   5000000 perm   10659 sec   (469 perm/sec)   p_kst 1.174000e-04   p_cons 8.586674e-01   p_joint 4.886000e-04

Outputting figure to mutsig2_images.part000000000173/TEX15.2_8386_5000000_0.0001174_0.85867_0.0004886.png
                gene_name: TEX15
               theta_stop: 0.16 
                    nperm: 5000000 
                     p_ks: 0.00012 
        ci_ks_bounds_left: 0.00011 
       ci_ks_bounds_right: 0.00013 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.86 
     ci_cons_bounds_right: 0.86 
                  p_joint: 0.00049 
     ci_joint_bounds_left: 0.00047 
    ci_joint_bounds_right: 0.00051 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000173
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 173 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1534>
Subject: Job 8704386: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1534>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000174> was used as the working directory.
Started at Thu Nov 15 19:37:10 2012
Results reported at Thu Nov 15 19:40:33 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000174.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000174.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 174  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000174.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    276.30 sec.
    Max Memory :      5726 MB
    Max Swap   :      8496 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
174
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 174
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 174: processing genes 15651 - 15741
Calculating significance of each gene.
Using projection method.
15651	TFCP2L1	1
15652	TFDP1	1
15653	TFDP2	1
15654	TFDP3	1
15655	TFE3	1
15656	TFEB	1
15657	TFEC	1
15658	TFF1	1
15659	TFF2	1
15660	TFF3	1
15661	TFG	1
15662	TFIP11	8.740447e-02
15663	TFPI	1
In gene TFPI2 the following bins exceed PROBCAP:
    THCA-CE-A13K-TP	categ 6	N = 728     n = 1	mu =   6.66e-08
15664	TFPI2	1.873139e-02
15665	TFPT	1
15666	TFR2	1
15667	TFRC	1
In gene TG the following bins exceed PROBCAP:
    THCA-ET-A3BO-TP	categ 6	N = 8325    n = 1	mu =   1.40e-07
15668	TG	3.941564e-09
15669	TGDS	1
15670	TGFA	1
15671	TGFB1	2.778608e-02
15672	TGFB1I1	1
15673	TGFB2	1
15674	TGFB3	1
15675	TGFBI	2.100530e-01
15676	TGFBR1	1
15677	TGFBR2	1
15678	TGFBR3	1.876691e-01
15679	TGFBRAP1	1
15680	TGIF1	1
15681	TGIF2	1
15682	TGIF2LX	1
15683	TGM1	1
15684	TGM2	1
15685	TGM3	1
15686	TGM4	1
15687	TGM5	1
15688	TGM6	8.432869e-02
15689	TGM7	1
15690	TGOLN2	5.973934e-03
15691	TGS1	1
15692	TH	1
15693	TH1L	1
15694	THADA	1
15695	THAP1	1
15696	THAP10	1
15697	THAP11	1
15698	THAP2	1
15699	THAP3	1
15700	THAP4	1
15701	THAP5	4.020242e-02
15702	THAP6	1
15703	THAP7	8.356472e-02
15704	THAP8	1
15705	THAP9	1
15706	THBD	1
15707	THBS1	2.331254e-01
15708	THBS2	2.430362e-01
15709	THBS3	2.801694e-01
15710	THBS4	2.478485e-01
15711	THEG	1.685479e-01
15712	THEM4	1
15713	THEM5	1
15714	THEMIS	1.892977e-03
15715	THG1L	1
15716	THNSL1	1
15717	THNSL2	1
15718	THOC1	1.812832e-01
15719	THOC2	3.379472e-01
15720	THOC3	1
15721	THOC4	1
15722	THOC5	1
15723	THOC6	1
15724	THOC7	1
15725	THOP1	1
15726	THPO	1.054109e-02
15727	THRA	1
15728	THRAP3	1
15729	THRB	1
15730	THRSP	1
15731	THSD1	5.220107e-03
15732	THSD4	1
15733	THSD7A	1
15734	THSD7B	2.907040e-01
15735	THTPA	1
15736	THUMPD1	1
15737	THUMPD2	1
15738	THUMPD3	1
15739	THY1	1
15740	THYN1	1.004740e-01
15741	TIA1	1
Done

Running MutSig 2:
Scatter job 174: processing genes 15651 - 15741
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TG
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.649139e-02	ci left: 1.629794e-01	ci right 1.778132e-01	k: 1703	n:10000
Cons ci ratio: 4.409049e-02	ci left: 4.316360e-01	ci right 4.511982e-01	k: 4414	n:10000
KS ci ratio: 1.163709e-01	ci left: 9.593994e-02	ci right 1.078931e-01	k: 1018	n:10000
TG   10000 perm   4 sec   (2705 perm/sec)   p_kst 1.018000e-01   p_cons 4.414000e-01   p_joint 1.703000e-01

Joint ci ratio: 5.782345e-02	ci left: 1.814192e-01	ci right 1.922720e-01	k: 3736	n:20000
Cons ci ratio: 2.995741e-02	ci left: 4.542724e-01	ci right 4.681388e-01	k: 9224	n:20000
KS ci ratio: 8.324667e-02	ci left: 9.563031e-02	ci right 1.039865e-01	k: 1995	n:20000
TG   20000 perm   11 sec   (1841 perm/sec)   p_kst 9.975000e-02   p_cons 4.612000e-01   p_joint 1.868000e-01

Outputting figure to mutsig2_images.part000000000174/TG.16_8499_20000_0.09975_0.4612_0.1868.png
                gene_name: TG
               theta_stop: 0.083 
                    nperm: 20000 
                     p_ks: 0.100 
        ci_ks_bounds_left: 0.096 
       ci_ks_bounds_right: 0.10 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 0.19 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.19 

Current progress: 20 percent done.
THEMIS
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.287024e-02	ci left: 5.773758e-01	ci right 5.967734e-01	k: 5871	n:10000
Cons ci ratio: 9.197123e-03	ci left: 9.433622e-01	ci right 9.521746e-01	k: 9479	n:10000
KS ci ratio: 4.293816e-02	ci left: 4.447053e-01	ci right 4.643212e-01	k: 4545	n:10000
THEMIS   10000 perm   2 sec   (5658 perm/sec)   p_kst 4.545000e-01   p_cons 9.479000e-01   p_joint 5.871000e-01

Outputting figure to mutsig2_images.part000000000174/THEMIS.3_2071_10000_0.4545_0.9479_0.5871.png
                gene_name: THEMIS
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.45 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.46 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 0.59 
     ci_joint_bounds_left: 0.58 
    ci_joint_bounds_right: 0.60 

Current progress: 40 percent done.
THSD1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.625577e-02	ci left: 8.462127e-01	ci right 8.601809e-01	k: 8533	n:10000
Cons ci ratio: 2.614451e-02	ci left: 6.829473e-01	ci right 7.011407e-01	k: 6921	n:10000
KS ci ratio: 1.425160e-02	ci left: 8.768454e-01	ci right 8.895304e-01	k: 8833	n:10000
THSD1   10000 perm   2 sec   (5800 perm/sec)   p_kst 8.833000e-01   p_cons 6.921000e-01   p_joint 8.533000e-01

Outputting figure to mutsig2_images.part000000000174/THSD1.3_2575_10000_0.8833_0.6921_0.8533.png
                gene_name: THSD1
               theta_stop: 0.026 
                    nperm: 10000 
                     p_ks: 0.88 
        ci_ks_bounds_left: 0.88 
       ci_ks_bounds_right: 0.89 
                   p_cons: 0.69 
      ci_cons_bounds_left: 0.68 
     ci_cons_bounds_right: 0.70 
                  p_joint: 0.85 
     ci_joint_bounds_left: 0.85 
    ci_joint_bounds_right: 0.86 

Current progress: 60 percent done.
TGOLN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.523286e-02	ci left: 2.565673e-01	ci right 2.739696e-01	k: 2652	n:10000
Cons ci ratio: 9.198086e-02	ci left: 1.465847e-01	ci right 1.608177e-01	k: 1536	n:10000
KS ci ratio: 7.703343e-03	ci left: 9.590082e-01	ci right 9.665191e-01	k: 9629	n:10000
TGOLN2   10000 perm   2 sec   (6515 perm/sec)   p_kst 9.629000e-01   p_cons 1.536000e-01   p_joint 2.652000e-01

Outputting figure to mutsig2_images.part000000000174/TGOLN2.2_1330_10000_0.9629_0.1536_0.2652.png
                gene_name: TGOLN2
               theta_stop: 0.092 
                    nperm: 10000 
                     p_ks: 0.96 
        ci_ks_bounds_left: 0.96 
       ci_ks_bounds_right: 0.97 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.27 
     ci_joint_bounds_left: 0.26 
    ci_joint_bounds_right: 0.27 

Current progress: 80 percent done.
THPO
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.904114e-02	ci left: 6.361335e-01	ci right 6.549816e-01	k: 6456	n:10000
Cons ci ratio: 5.682955e-02	ci left: 3.131428e-01	ci right 3.315608e-01	k: 3223	n:10000
KS ci ratio: 1.986367e-02	ci left: 7.876620e-01	ci right 8.035654e-01	k: 7957	n:10000
THPO   10000 perm   1 sec   (6918 perm/sec)   p_kst 7.957000e-01   p_cons 3.223000e-01   p_joint 6.456000e-01

Outputting figure to mutsig2_images.part000000000174/THPO.2_1082_10000_0.7957_0.3223_0.6456.png
                gene_name: THPO
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.80 
        ci_ks_bounds_left: 0.79 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.65 
     ci_joint_bounds_left: 0.64 
    ci_joint_bounds_right: 0.65 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000174
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 174 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1647>
Subject: Job 8704388: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1647>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000175> was used as the working directory.
Started at Thu Nov 15 19:37:10 2012
Results reported at Thu Nov 15 19:39:30 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000175.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000175.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 175  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000175.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    162.19 sec.
    Max Memory :      5843 MB
    Max Swap   :      8442 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
175
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 175
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 175: processing genes 15742 - 15831
Calculating significance of each gene.
Using projection method.
15742	TIAF1	1
15743	TIAL1	1
15744	TIAM1	1
15745	TIAM2	5.408866e-02
15746	TICAM1	1
15747	TIE1	1
15748	TIFA	1
15749	TIFAB	1.622269e-02
15750	TIGD2	1
15751	TIGD3	1
15752	TIGD4	8.755934e-02
15753	TIGD5	1
15754	TIGD6	1
In gene TIGD7 the following bins exceed PROBCAP:
    THCA-DJ-A13L-TP	categ 6	N = 1654    n = 1	mu =   2.06e-07
15755	TIGD7	1.620481e-01
15756	TIGIT	1
15757	TIMD4	1
15758	TIMELESS	1
15759	TIMM10	1
15760	TIMM13	1
15761	TIMM16	1
15762	TIMM17A	1
15763	TIMM17B	1
15764	TIMM22	1
15765	TIMM23	1
15766	TIMM44	5.273875e-02
15767	TIMM50	1
15768	TIMM8A	1
15769	TIMM8B	1
15770	TIMM9	1
15771	TIMP1	1
15772	TIMP2	1
15773	TIMP3	1
15774	TIMP4	1
15775	TINAG	1
15776	TINAGL1	1
15777	TINF2	1
15778	TIPARP	1.773549e-01
15779	TIPIN	1.158964e-02
15780	TIPRL	1
15781	TIRAP	1
15782	TJAP1	1
15783	TJP1	1.919345e-01
15784	TJP2	1
15785	TJP3	1
15786	TK1	5.292824e-03
15787	TK2	1
15788	TKT	1
15789	TKTL1	1
15790	TKTL2	2.247178e-01
15791	TLCD1	1
15792	TLE1	1
15793	TLE2	1
15794	TLE3	1
15795	TLE4	1
15796	TLE6	1
15797	TLK1	1
15798	TLK2	1
15799	TLL1	1
15800	TLL2	2.371490e-01
15801	TLN1	3.877235e-01
15802	TLN2	2.482944e-01
15803	TLR1	1
15804	TLR10	1
15805	TLR2	1
15806	TLR3	1
15807	TLR4	1.131171e-01
15808	TLR5	1
15809	TLR6	1
15810	TLR7	1
15811	TLR8	1
15812	TLR9	1
15813	TLX1	1
15814	TLX1NB	1
15815	TLX2	1
15816	TLX3	1
15817	TM2D1	1
15818	TM2D2	1
15819	TM2D3	2.007017e-02
15820	TM4SF1	1
15821	TM4SF18	1
15822	TM4SF19	1
15823	TM4SF20	1
15824	TM4SF4	1
15825	TM4SF5	1
15826	TM6SF1	1
15827	TM6SF2	1
15828	TM7SF2	1.274851e-01
15829	TM7SF3	1
15830	TM7SF4	1
15831	TM9SF1	1
Done

Running MutSig 2:
Scatter job 175: processing genes 15742 - 15831
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TIAM2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.789543e-02	ci left: 6.544443e-01	ci right 6.730602e-01	k: 6638	n:10000
KS ci ratio: 1.634652e-02	ci left: 8.447858e-01	ci right 8.588086e-01	k: 8519	n:10000
TIAM2   10000 perm   3 sec   (3992 perm/sec)   p_kst 8.519000e-01   p_cons 6.638000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000175/TIAM2.3_5202_10000_0.8519_0.6638_1.png
                gene_name: TIAM2
               theta_stop: 0.028 
                    nperm: 10000 
                     p_ks: 0.85 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.86 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.65 
     ci_cons_bounds_right: 0.67 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 25 percent done.
TJP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.781757e-02	ci left: 8.212717e-01	ci right 8.361363e-01	k: 8288	n:10000
KS ci ratio: 3.270783e-02	ci left: 5.797835e-01	ci right 5.991643e-01	k: 5895	n:10000
TJP1   10000 perm   2 sec   (4556 perm/sec)   p_kst 5.895000e-01   p_cons 8.288000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000175/TJP1.2_5359_10000_0.5895_0.8288_1.png
                gene_name: TJP1
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.84 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
TK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.922228e-03	ci left: 9.965509e-01	ci right 9.985415e-01	k: 9977	n:10000
KS ci ratio: 1.963746e-02	ci left: 7.914146e-01	ci right 8.072106e-01	k: 7994	n:10000
TK1   10000 perm   2 sec   (6105 perm/sec)   p_kst 7.994000e-01   p_cons 9.977000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000175/TK1.2_733_10000_0.7994_0.9977_1.png
                gene_name: TK1
               theta_stop: 0.020 
                    nperm: 10000 
                     p_ks: 0.80 
        ci_ks_bounds_left: 0.79 
       ci_ks_bounds_right: 0.81 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 75 percent done.
TLN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.521033e-02	ci left: 5.435919e-01	ci right 5.631770e-01	k: 5534	n:10000
KS ci ratio: 2.637165e-02	ci left: 6.792186e-01	ci right 6.974716e-01	k: 6884	n:10000
TLN2   10000 perm   2 sec   (4345 perm/sec)   p_kst 6.884000e-01   p_cons 5.534000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000175/TLN2.2_7853_10000_0.6884_0.5534_1.png
                gene_name: TLN2
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.69 
        ci_ks_bounds_left: 0.68 
       ci_ks_bounds_right: 0.70 
                   p_cons: 0.55 
      ci_cons_bounds_left: 0.54 
     ci_cons_bounds_right: 0.56 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000175
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 175 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1651>
Subject: Job 8704389: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1651>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000176> was used as the working directory.
Started at Thu Nov 15 19:37:10 2012
Results reported at Thu Nov 15 19:39:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000176.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000176.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 176  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000176.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    155.42 sec.
    Max Memory :      5513 MB
    Max Swap   :      8345 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
176
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 176
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 176: processing genes 15832 - 15922
Calculating significance of each gene.
Using projection method.
15832	TM9SF2	1
15833	TM9SF3	1
15834	TM9SF4	2.947193e-02
15835	TMBIM1	1
15836	TMBIM4	1
15837	TMBIM6	1
15838	TMC1	1.551292e-01
15839	TMC2	1
15840	TMC3	1
15841	TMC4	1
15842	TMC5	4.189560e-01
15843	TMC6	1
15844	TMC7	1.244297e-01
In gene TMC8 the following bins exceed PROBCAP:
    THCA-DJ-A3UM-TP	categ 6	N = 1829    n = 1	mu =   3.39e-08
15845	TMC8	5.072548e-02
15846	TMCC1	1.360474e-02
15847	TMCC2	1
15848	TMCC3	1
15849	TMCO1	8.785953e-02
15850	TMCO2	1
15851	TMCO3	1
15852	TMCO4	1
15853	TMCO5A	1
15854	TMCO6	1
15855	TMCO7	1
15856	TMED1	1
15857	TMED10	1
15858	TMED2	1
15859	TMED3	1
15860	TMED4	1
15861	TMED5	1
15862	TMED6	1
15863	TMED7	1
15864	TMED7-TICAM2	1
In gene TMED8 the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 879     n = 1	mu =   2.35e-07
15865	TMED8	1.066095e-01
15866	TMED9	1
15867	TMEFF1	1
15868	TMEFF2	1
15869	TMEM100	9.844004e-03
15870	TMEM101	1
15871	TMEM102	1
15872	TMEM104	1
15873	TMEM105	1
15874	TMEM106A	1
15875	TMEM106B	1
15876	TMEM106C	1
15877	TMEM107	1
15878	TMEM108	1
15879	TMEM109	1.102242e-01
15880	TMEM11	1
15881	TMEM110	1
15882	TMEM111	1
15883	TMEM115	1
15884	TMEM116	1
15885	TMEM117	1
15886	TMEM119	1
15887	TMEM120A	1
15888	TMEM120B	1
15889	TMEM123	1
15890	TMEM125	1
15891	TMEM126A	1
15892	TMEM126B	1
15893	TMEM127	1
15894	TMEM128	1
15895	TMEM130	1
15896	TMEM131	1
15897	TMEM132A	1
15898	TMEM132B	3.844775e-02
15899	TMEM132D	3.954070e-01
15900	TMEM132E	1
15901	TMEM133	1
15902	TMEM134	1
15903	TMEM135	1
15904	TMEM136	1
15905	TMEM138	1
15906	TMEM139	1
15907	TMEM140	1
15908	TMEM141	1
15909	TMEM143	1.465810e-01
15910	TMEM144	1
15911	TMEM145	3.178306e-02
15912	TMEM146	3.390247e-01
15913	TMEM147	1
15914	TMEM149	1
15915	TMEM14A	1
15916	TMEM14B	1
15917	TMEM14C	1
15918	TMEM14E	1
15919	TMEM150A	1
15920	TMEM150B	1
15921	TMEM150C	1
15922	TMEM151A	1
Done

Running MutSig 2:
Scatter job 176: processing genes 15832 - 15922
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TM9SF4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.011404e-02	ci left: 4.785574e-01	ci right 4.982494e-01	k: 4884	n:10000
Cons ci ratio: 6.309380e-02	ci left: 2.696308e-01	ci right 2.872985e-01	k: 2784	n:10000
KS ci ratio: 4.981796e-02	ci left: 3.727610e-01	ci right 3.919076e-01	k: 3823	n:10000
TM9SF4   10000 perm   2 sec   (5214 perm/sec)   p_kst 3.823000e-01   p_cons 2.784000e-01   p_joint 4.884000e-01

Outputting figure to mutsig2_images.part000000000176/TM9SF4.2_2001_10000_0.3823_0.2784_0.4884.png
                gene_name: TM9SF4
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.39 
                   p_cons: 0.28 
      ci_cons_bounds_left: 0.27 
     ci_cons_bounds_right: 0.29 
                  p_joint: 0.49 
     ci_joint_bounds_left: 0.48 
    ci_joint_bounds_right: 0.50 

Current progress: 33 percent done.
TMCC1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.816794e-02	ci left: 8.155790e-01	ci right 8.306323e-01	k: 8232	n:10000
Cons ci ratio: 2.394201e-02	ci left: 7.194657e-01	ci right 7.370011e-01	k: 7283	n:10000
KS ci ratio: 8.403543e-02	ci left: 1.711374e-01	ci right 1.862502e-01	k: 1786	n:10000
TMCC1   10000 perm   2 sec   (6047 perm/sec)   p_kst 1.786000e-01   p_cons 7.283000e-01   p_joint 8.232000e-01

Outputting figure to mutsig2_images.part000000000176/TMCC1.2_1978_10000_0.1786_0.7283_0.8232.png
                gene_name: TMCC1
               theta_stop: 0.084 
                    nperm: 10000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.19 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.72 
     ci_cons_bounds_right: 0.74 
                  p_joint: 0.82 
     ci_joint_bounds_left: 0.82 
    ci_joint_bounds_right: 0.83 

Current progress: 67 percent done.
TMEM132B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.734486e-02	ci left: 8.289004e-01	ci right 8.435032e-01	k: 8363	n:10000
KS ci ratio: 2.143030e-02	ci left: 7.615226e-01	ci right 7.781199e-01	k: 7699	n:10000
TMEM132B   10000 perm   2 sec   (5869 perm/sec)   p_kst 7.699000e-01   p_cons 8.363000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000176/TMEM132B.2_3273_10000_0.7699_0.8363_1.png
                gene_name: TMEM132B
               theta_stop: 0.021 
                    nperm: 10000 
                     p_ks: 0.77 
        ci_ks_bounds_left: 0.76 
       ci_ks_bounds_right: 0.78 
                   p_cons: 0.84 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.84 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000176
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 176 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1642>
Subject: Job 8704391: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1642>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000177> was used as the working directory.
Started at Thu Nov 15 19:37:10 2012
Results reported at Thu Nov 15 19:39:04 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000177.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000177.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 177  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000177.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    154.67 sec.
    Max Memory :      4712 MB
    Max Swap   :      7759 MB

    Max Processes  :         7
    Max Threads    :        91

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
177
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 177
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 177: processing genes 15923 - 16012
Calculating significance of each gene.
Using projection method.
15923	TMEM154	1
15924	TMEM155	1
15925	TMEM156	1
15926	TMEM159	1
15927	TMEM161A	1
15928	TMEM161B	5.565580e-02
15929	TMEM163	1
15930	TMEM164	1
15931	TMEM165	1
15932	TMEM167A	1
15933	TMEM167B	1
15934	TMEM168	1
15935	TMEM169	1
15936	TMEM17	1
15937	TMEM170A	1
15938	TMEM170B	1
15939	TMEM171	1
15940	TMEM173	1
15941	TMEM174	1
15942	TMEM175	1
15943	TMEM176A	1
15944	TMEM176B	6.848584e-02
15945	TMEM177	1
15946	TMEM178	7.083349e-02
15947	TMEM179	1
15948	TMEM179B	1
15949	TMEM18	1
15950	TMEM180	1
15951	TMEM181	1.769467e-01
15952	TMEM182	1
15953	TMEM183A	1
15954	TMEM183B	1
15955	TMEM184A	1
15956	TMEM184B	1
15957	TMEM184C	1
15958	TMEM185A	1
15959	TMEM186	1
15960	TMEM187	1
15961	TMEM188	1
15962	TMEM189	1
15963	TMEM189-UBE2V1	1
15964	TMEM19	1
15965	TMEM190	1
15966	TMEM192	1
15967	TMEM194A	1
15968	TMEM195	7.777907e-02
15969	TMEM196	1
15970	TMEM198	1
15971	TMEM199	1
15972	TMEM2	4.950766e-01
15973	TMEM20	1
15974	TMEM200A	1
15975	TMEM200B	1
15976	TMEM200C	1
15977	TMEM201	1
15978	TMEM202	1
15979	TMEM203	1
15980	TMEM204	1
15981	TMEM205	1
15982	TMEM206	1
15983	TMEM207	1
15984	TMEM208	1
15985	TMEM209	1
15986	TMEM211	1
15987	TMEM213	1
15988	TMEM214	1
15989	TMEM215	1
15990	TMEM216	1
15991	TMEM217	1
15992	TMEM218	1
15993	TMEM219	1
15994	TMEM22	1
15995	TMEM220	1
15996	TMEM222	1
15997	TMEM223	1
15998	TMEM225	7.549877e-03
15999	TMEM229B	1
16000/18093 16000	TMEM231	1
16001	TMEM25	1
16002	TMEM26	1.776028e-01
16003	TMEM27	1
16004	TMEM30A	1
16005	TMEM30B	1
16006	TMEM31	1
16007	TMEM33	1
16008	TMEM35	1.798160e-02
16009	TMEM37	3.023725e-02
16010	TMEM38A	1
16011	TMEM38B	1
16012	TMEM39A	1
Done

Running MutSig 2:
Scatter job 177: processing genes 15923 - 16012
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000177
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 177 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1723>
Subject: Job 8704393: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1723>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000178> was used as the working directory.
Started at Thu Nov 15 19:37:10 2012
Results reported at Thu Nov 15 22:17:35 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000178.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000178.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 178  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000178.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   9682.99 sec.
    Max Memory :      5770 MB
    Max Swap   :      8544 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
178
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 178
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 178: processing genes 16013 - 16103
Calculating significance of each gene.
Using projection method.
16013	TMEM39B	1
16014	TMEM40	1
16015	TMEM41A	1
16016	TMEM41B	1
16017	TMEM42	1
16018	TMEM43	1
16019	TMEM44	1
16020	TMEM45A	1
16021	TMEM45B	1
16022	TMEM47	1
16023	TMEM48	1
16024	TMEM49	8.328314e-03
16025	TMEM5	1
16026	TMEM50A	1
16027	TMEM50B	7.569536e-02
16028	TMEM51	1
16029	TMEM52	1
16030	TMEM53	9.690023e-02
16031	TMEM54	1
16032	TMEM55A	1
16033	TMEM55B	1
16034	TMEM56	1
16035	TMEM57	1
16036	TMEM59	1
16037	TMEM59L	1
16038	TMEM60	1
16039	TMEM61	1
16040	TMEM62	1.229549e-01
16041	TMEM63A	1
16042	TMEM63B	2.914890e-01
16043	TMEM63C	1
16044	TMEM64	1
16045	TMEM65	1
16046	TMEM66	1.202912e-01
16047	TMEM67	2.117126e-01
16048	TMEM68	1
16049	TMEM69	1
16050	TMEM70	1
16051	TMEM71	1.212797e-01
16052	TMEM72	1
16053	TMEM74	1
16054	TMEM79	1
16055	TMEM80	1
16056	TMEM81	1
16057	TMEM82	1
16058	TMEM85	2.366818e-02
16059	TMEM86A	1
16060	TMEM86B	1
16061	TMEM87A	1
16062	TMEM87B	1
16063	TMEM88	1
16064	TMEM89	1.790730e-02
16065	TMEM8A	1
16066	TMEM8B	1
16067	TMEM8C	4.806135e-02
16068	TMEM9	1
16069	TMEM90A	1
16070	TMEM90B	2.338277e-04
16071	TMEM91	1
16072	TMEM92	1
16073	TMEM93	1
16074	TMEM95	1
16075	TMEM97	1
16076	TMEM98	1
16077	TMEM99	1
16078	TMEM9B	1
16079	TMF1	3.980594e-01
16080	TMIE	1
16081	TMIGD1	1
16082	TMIGD2	1
16083	TMLHE	1
16084	TMOD1	1
16085	TMOD2	1
16086	TMOD3	1
16087	TMOD4	1
16088	TMPO	1
16089	TMPPE	1
16090	TMPRSS11A	1
16091	TMPRSS11B	1
16092	TMPRSS11D	1
16093	TMPRSS11E	1
In gene TMPRSS11F the following bins exceed PROBCAP:
    THCA-FE-A235-TP	categ 6	N = 1357    n = 1	mu =   1.02e-07
16094	TMPRSS11F	7.128946e-02
16095	TMPRSS12	1
16096	TMPRSS13	1
16097	TMPRSS15	2.477488e-02
16098	TMPRSS2	1
16099	TMPRSS3	1
16100	TMPRSS4	1
16101	TMPRSS5	1
16102	TMPRSS6	1
16103	TMPRSS7	1
Done

Running MutSig 2:
Scatter job 178: processing genes 16013 - 16103
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TMEM90B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.369981e-01	ci left: 3.885975e-03	ci right 6.813584e-03	k: 52	n:10000
Cons ci ratio: 1.721173e-02	ci left: 8.310374e-01	ci right 8.455650e-01	k: 8384	n:10000
KS ci ratio: 2.262761e+00	ci left: 2.422185e-05	ci right 7.222801e-04	k: 2	n:10000
TMEM90B   10000 perm   1 sec   (7100 perm/sec)   p_kst 2.000000e-04   p_cons 8.384000e-01   p_joint 5.200000e-03

Joint ci ratio: 5.327106e-01	ci left: 1.985643e-03	ci right 3.464850e-03	k: 53	n:20000
Cons ci ratio: 1.195597e-02	ci left: 8.380352e-01	ci right 8.481648e-01	k: 16863	n:20000
KS ci ratio: 2.262987e+00	ci left: 1.211069e-05	ci right 3.611872e-04	k: 2	n:20000
TMEM90B   20000 perm   5 sec   (3937 perm/sec)   p_kst 1.000000e-04   p_cons 8.431500e-01   p_joint 2.650000e-03

Joint ci ratio: 5.329553e-01	ci left: 1.323626e-03	ci right 2.310215e-03	k: 53	n:30000
Cons ci ratio: 9.419400e-03	ci left: 8.483018e-01	ci right 8.563632e-01	k: 25571	n:30000
KS ci ratio: 2.263062e+00	ci left: 8.073745e-06	ci right 2.408020e-04	k: 2	n:30000
TMEM90B   30000 perm   7 sec   (4401 perm/sec)   p_kst 6.666667e-05   p_cons 8.523667e-01   p_joint 1.766667e-03

Joint ci ratio: 5.015155e-01	ci left: 1.144847e-03	ci right 1.930381e-03	k: 60	n:40000
Cons ci ratio: 8.409128e-03	ci left: 8.409617e-01	ci right 8.480882e-01	k: 33782	n:40000
KS ci ratio: 2.263100e+00	ci left: 6.055289e-06	ci right 1.806054e-04	k: 2	n:40000
TMEM90B   40000 perm   9 sec   (4680 perm/sec)   p_kst 5.000000e-05   p_cons 8.445500e-01   p_joint 1.500000e-03

Joint ci ratio: 5.381626e-01	ci left: 7.768163e-04	ci right 1.363601e-03	k: 52	n:50000
Cons ci ratio: 7.516441e-03	ci left: 8.415155e-01	ci right 8.478844e-01	k: 42236	n:50000
KS ci ratio: 2.263123e+00	ci left: 4.844222e-06	ci right 1.444862e-04	k: 2	n:50000
TMEM90B   50000 perm   10 sec   (4830 perm/sec)   p_kst 4.000000e-05   p_cons 8.447200e-01   p_joint 1.040000e-03

Joint ci ratio: 5.331999e-01	ci left: 6.617451e-04	ci right 1.155265e-03	k: 53	n:60000
Cons ci ratio: 6.846776e-03	ci left: 8.423647e-01	ci right 8.481685e-01	k: 50717	n:60000
KS ci ratio: 2.263138e+00	ci left: 4.036847e-06	ci right 1.204062e-04	k: 2	n:60000
TMEM90B   60000 perm   12 sec   (4915 perm/sec)   p_kst 3.333333e-05   p_cons 8.452833e-01   p_joint 8.833333e-04

Joint ci ratio: 5.541697e-01	ci left: 5.179073e-04	ci right 9.253328e-04	k: 49	n:70000
Cons ci ratio: 6.170375e-03	ci left: 8.495492e-01	ci right 8.548216e-01	k: 59654	n:70000
KS ci ratio: 2.263148e+00	ci left: 3.460151e-06	ci right 1.032060e-04	k: 2	n:70000
TMEM90B   70000 perm   14 sec   (4957 perm/sec)   p_kst 2.857143e-05   p_cons 8.522000e-01   p_joint 7.000000e-04

Joint ci ratio: 5.907960e-01	ci left: 3.890179e-04	ci right 7.239415e-04	k: 43	n:80000
Cons ci ratio: 5.765828e-03	ci left: 8.499860e-01	ci right 8.549134e-01	k: 68197	n:80000
KS ci ratio: 2.263156e+00	ci left: 3.027630e-06	ci right 9.030565e-05	k: 2	n:80000
TMEM90B   80000 perm   16 sec   (4972 perm/sec)   p_kst 2.500000e-05   p_cons 8.524625e-01   p_joint 5.375000e-04

Joint ci ratio: 6.624684e-01	ci left: 2.616358e-04	ci right 5.278670e-04	k: 34	n:90000
Cons ci ratio: 5.438136e-03	ci left: 8.500322e-01	ci right 8.546784e-01	k: 76713	n:90000
KS ci ratio: 2.263163e+00	ci left: 2.691226e-06	ci right 8.027198e-05	k: 2	n:90000
TMEM90B   90000 perm   18 sec   (4958 perm/sec)   p_kst 2.222222e-05   p_cons 8.523667e-01   p_joint 3.777778e-04

Joint ci ratio: 8.553200e-01	ci left: 1.221693e-04	ci right 3.088670e-04	k: 20	n:100000
Cons ci ratio: 5.153252e-03	ci left: 8.504379e-01	ci right 8.548416e-01	k: 85265	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
TMEM90B   100000 perm   20 sec   (4918 perm/sec)   p_kst 1.000000e-05   p_cons 8.526500e-01   p_joint 2.000000e-04

Joint ci ratio: 7.543083e-01	ci left: 1.544062e-04	ci right 3.463084e-04	k: 26	n:110000
Cons ci ratio: 4.917071e-03	ci left: 8.503541e-01	ci right 8.545546e-01	k: 93771	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
TMEM90B   110000 perm   23 sec   (4862 perm/sec)   p_kst 9.090909e-06   p_cons 8.524636e-01   p_joint 2.363636e-04

Joint ci ratio: 7.278347e-01	ci left: 1.550537e-04	ci right 3.372141e-04	k: 28	n:120000
Cons ci ratio: 4.698627e-03	ci left: 8.509335e-01	ci right 8.549494e-01	k: 102354	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
TMEM90B   120000 perm   25 sec   (4819 perm/sec)   p_kst 8.333333e-06   p_cons 8.529500e-01   p_joint 2.333333e-04

Joint ci ratio: 7.407277e-01	ci left: 1.368749e-04	ci right 3.021671e-04	k: 27	n:130000
Cons ci ratio: 4.509375e-03	ci left: 8.512877e-01	ci right 8.551427e-01	k: 110919	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
TMEM90B   130000 perm   27 sec   (4773 perm/sec)   p_kst 7.692308e-06   p_cons 8.532231e-01   p_joint 2.076923e-04

Joint ci ratio: 7.543289e-01	ci left: 1.213182e-04	ci right 2.721027e-04	k: 26	n:140000
Cons ci ratio: 4.343014e-03	ci left: 8.514932e-01	ci right 8.552064e-01	k: 119470	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
TMEM90B   140000 perm   30 sec   (4716 perm/sec)   p_kst 7.142857e-06   p_cons 8.533571e-01   p_joint 1.857143e-04

Joint ci ratio: 8.992497e-01	ci left: 7.112111e-05	ci right 1.896451e-04	k: 18	n:150000
Cons ci ratio: 4.321565e-03	ci left: 8.439691e-01	ci right 8.476309e-01	k: 126871	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
TMEM90B   150000 perm   32 sec   (4666 perm/sec)   p_kst 6.666667e-06   p_cons 8.458067e-01   p_joint 1.200000e-04

Joint ci ratio: 8.356867e-01	ci left: 8.124760e-05	ci right 2.006226e-04	k: 21	n:160000
Cons ci ratio: 4.178926e-03	ci left: 8.443664e-01	ci right 8.479085e-01	k: 135383	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
TMEM90B   160000 perm   35 sec   (4611 perm/sec)   p_kst 6.250000e-06   p_cons 8.461437e-01   p_joint 1.312500e-04

Joint ci ratio: 9.799510e-01	ci left: 4.938544e-05	ci right 1.455265e-04	k: 15	n:170000
Cons ci ratio: 4.059229e-03	ci left: 8.440922e-01	ci right 8.475313e-01	k: 143789	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
TMEM90B   170000 perm   37 sec   (4534 perm/sec)   p_kst 5.882353e-06   p_cons 8.458176e-01   p_joint 8.823529e-05

Joint ci ratio: 9.239041e-01	ci left: 5.501830e-05	ci right 1.512104e-04	k: 17	n:180000
Cons ci ratio: 3.944202e-03	ci left: 8.441847e-01	ci right 8.475264e-01	k: 152255	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
TMEM90B   180000 perm   40 sec   (4480 perm/sec)   p_kst 5.555556e-06   p_cons 8.458611e-01   p_joint 9.444444e-05

Joint ci ratio: 8.992623e-01	ci left: 5.614799e-05	ci right 1.497209e-04	k: 18	n:190000
Cons ci ratio: 3.841142e-03	ci left: 8.440837e-01	ci right 8.473374e-01	k: 160686	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
TMEM90B   190000 perm   43 sec   (4423 perm/sec)   p_kst 5.263158e-06   p_cons 8.457158e-01   p_joint 9.473684e-05

Joint ci ratio: 7.156353e-01	ci left: 9.711086e-05	ci right 2.082376e-04	k: 29	n:200000
Cons ci ratio: 3.638146e-03	ci left: 8.514857e-01	ci right 8.545941e-01	k: 170609	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
TMEM90B   200000 perm   46 sec   (4364 perm/sec)   p_kst 5.000000e-06   p_cons 8.530450e-01   p_joint 1.450000e-04

Joint ci ratio: 7.156380e-01	ci left: 9.248644e-05	ci right 1.983218e-04	k: 29	n:210000
Cons ci ratio: 3.548541e-03	ci left: 8.516600e-01	ci right 8.546922e-01	k: 179168	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
TMEM90B   210000 perm   49 sec   (4310 perm/sec)   p_kst 4.761905e-06   p_cons 8.531810e-01   p_joint 1.380952e-04

Joint ci ratio: 6.929127e-01	ci left: 9.574284e-05	ci right 2.000033e-04	k: 31	n:220000
Cons ci ratio: 3.468136e-03	ci left: 8.516092e-01	ci right 8.545724e-01	k: 187681	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
TMEM90B   220000 perm   52 sec   (4253 perm/sec)   p_kst 4.545455e-06   p_cons 8.530955e-01   p_joint 1.409091e-04

Joint ci ratio: 6.823340e-01	ci left: 9.516700e-05	ci right 1.964050e-04	k: 32	n:230000
Cons ci ratio: 3.395665e-03	ci left: 8.513629e-01	ci right 8.542630e-01	k: 196148	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
TMEM90B   230000 perm   55 sec   (4199 perm/sec)   p_kst 4.347826e-06   p_cons 8.528174e-01   p_joint 1.391304e-04

Joint ci ratio: 6.532830e-01	ci left: 1.015803e-04	ci right 2.028131e-04	k: 35	n:240000
Cons ci ratio: 3.323075e-03	ci left: 8.514766e-01	ci right 8.543149e-01	k: 204696	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
TMEM90B   240000 perm   58 sec   (4146 perm/sec)   p_kst 4.166667e-06   p_cons 8.529000e-01   p_joint 1.458333e-04

Joint ci ratio: 6.443951e-01	ci left: 1.008578e-04	ci right 1.993512e-04	k: 36	n:250000
Cons ci ratio: 3.253027e-03	ci left: 8.517303e-01	ci right 8.545095e-01	k: 213281	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
TMEM90B   250000 perm   61 sec   (4093 perm/sec)   p_kst 4.000000e-06   p_cons 8.531240e-01   p_joint 1.440000e-04

Joint ci ratio: 7.278837e-01	ci left: 7.156191e-05	ci right 1.556416e-04	k: 28	n:260000
Cons ci ratio: 3.191384e-03	ci left: 8.516369e-01	ci right 8.543629e-01	k: 221781	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
TMEM90B   260000 perm   64 sec   (4042 perm/sec)   p_kst 3.846154e-06   p_cons 8.530038e-01   p_joint 1.076923e-04

Joint ci ratio: 7.040111e-01	ci left: 7.496742e-05	ci right 1.586143e-04	k: 30	n:270000
Cons ci ratio: 3.131913e-03	ci left: 8.516475e-01	ci right 8.543227e-01	k: 230307	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
TMEM90B   270000 perm   68 sec   (3990 perm/sec)   p_kst 3.703704e-06   p_cons 8.529889e-01   p_joint 1.111111e-04

Joint ci ratio: 6.929238e-01	ci left: 7.522619e-05	ci right 1.571464e-04	k: 31	n:280000
Cons ci ratio: 3.075910e-03	ci left: 8.516364e-01	ci right 8.542635e-01	k: 238827	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
TMEM90B   280000 perm   71 sec   (3941 perm/sec)   p_kst 3.571429e-06   p_cons 8.529536e-01   p_joint 1.107143e-04

Joint ci ratio: 6.929252e-01	ci left: 7.263214e-05	ci right 1.517277e-04	k: 31	n:290000
Cons ci ratio: 3.021021e-03	ci left: 8.517752e-01	ci right 8.543557e-01	k: 247390	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
TMEM90B   290000 perm   74 sec   (3894 perm/sec)   p_kst 3.448276e-06   p_cons 8.530690e-01   p_joint 1.068966e-04

Joint ci ratio: 7.687407e-01	ci left: 5.392964e-05	ci right 1.230140e-04	k: 25	n:300000
Cons ci ratio: 2.969757e-03	ci left: 8.518382e-01	ci right 8.543750e-01	k: 255933	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
TMEM90B   300000 perm   78 sec   (3849 perm/sec)   p_kst 3.333333e-06   p_cons 8.531100e-01   p_joint 8.333333e-05

Joint ci ratio: 7.687418e-01	ci left: 5.218995e-05	ci right 1.190459e-04	k: 25	n:310000
Cons ci ratio: 2.920942e-03	ci left: 8.519039e-01	ci right 8.543991e-01	k: 264478	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
TMEM90B   310000 perm   82 sec   (3802 perm/sec)   p_kst 3.225806e-06   p_cons 8.531548e-01   p_joint 8.064516e-05

Joint ci ratio: 7.543713e-01	ci left: 5.307586e-05	ci right 1.190478e-04	k: 26	n:320000
Cons ci ratio: 2.874314e-03	ci left: 8.519784e-01	ci right 8.544339e-01	k: 273027	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
TMEM90B   320000 perm   85 sec   (3755 perm/sec)   p_kst 3.125000e-06   p_cons 8.532094e-01   p_joint 8.125000e-05

Joint ci ratio: 7.543723e-01	ci left: 5.146748e-05	ci right 1.154404e-04	k: 26	n:330000
Cons ci ratio: 2.829302e-03	ci left: 8.520974e-01	ci right 8.545146e-01	k: 281592	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
TMEM90B   330000 perm   89 sec   (3709 perm/sec)   p_kst 3.030303e-06   p_cons 8.533091e-01   p_joint 7.878788e-05

Joint ci ratio: 7.407788e-01	ci left: 5.233348e-05	ci right 1.155379e-04	k: 27	n:340000
Cons ci ratio: 2.787059e-03	ci left: 8.521446e-01	ci right 8.545258e-01	k: 290135	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
TMEM90B   340000 perm   93 sec   (3664 perm/sec)   p_kst 2.941176e-06   p_cons 8.533382e-01   p_joint 7.941176e-05

Joint ci ratio: 7.278945e-01	ci left: 5.316006e-05	ci right 1.156202e-04	k: 28	n:350000
Cons ci ratio: 2.747970e-03	ci left: 8.520690e-01	ci right 8.544165e-01	k: 298636	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
TMEM90B   350000 perm   97 sec   (3620 perm/sec)   p_kst 2.857143e-06   p_cons 8.532457e-01   p_joint 8.000000e-05

Joint ci ratio: 1.239594e+00	ci left: 1.143165e-05	ci right 4.745725e-05	k: 9	n:360000
Cons ci ratio: 2.709609e-03	ci left: 8.520787e-01	ci right 8.543934e-01	k: 307166	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
TMEM90B   360000 perm   101 sec   (3579 perm/sec)   p_kst 2.777778e-06   p_cons 8.532389e-01   p_joint 2.500000e-05

Joint ci ratio: 1.239594e+00	ci left: 1.112269e-05	ci right 4.617464e-05	k: 9	n:370000
Cons ci ratio: 2.670849e-03	ci left: 8.522724e-01	ci right 8.545544e-01	k: 315764	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
TMEM90B   370000 perm   105 sec   (3535 perm/sec)   p_kst 2.702703e-06   p_cons 8.534162e-01   p_joint 2.432432e-05

Joint ci ratio: 1.239595e+00	ci left: 1.082998e-05	ci right 4.495953e-05	k: 9	n:380000
Cons ci ratio: 2.634644e-03	ci left: 8.523664e-01	ci right 8.546177e-01	k: 324328	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
TMEM90B   380000 perm   109 sec   (3491 perm/sec)   p_kst 2.631579e-06   p_cons 8.534947e-01   p_joint 2.368421e-05

Joint ci ratio: 1.239595e+00	ci left: 1.055229e-05	ci right 4.380673e-05	k: 9	n:390000
Cons ci ratio: 2.601632e-03	ci left: 8.522860e-01	ci right 8.545087e-01	k: 332826	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
TMEM90B   390000 perm   113 sec   (3450 perm/sec)   p_kst 2.564103e-06   p_cons 8.534000e-01   p_joint 2.307692e-05

Joint ci ratio: 1.239596e+00	ci left: 1.028848e-05	ci right 4.271158e-05	k: 9	n:400000
Cons ci ratio: 2.569522e-03	ci left: 8.522399e-01	ci right 8.544350e-01	k: 341336	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
TMEM90B   400000 perm   117 sec   (3412 perm/sec)   p_kst 2.500000e-06   p_cons 8.533400e-01   p_joint 2.250000e-05

Joint ci ratio: 1.087194e+00	ci left: 1.512344e-05	ci right 5.112526e-05	k: 12	n:410000
Cons ci ratio: 2.536766e-03	ci left: 8.523748e-01	ci right 8.545422e-01	k: 349919	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
TMEM90B   410000 perm   122 sec   (3373 perm/sec)   p_kst 2.439024e-06   p_cons 8.534610e-01   p_joint 2.926829e-05

Joint ci ratio: 1.087194e+00	ci left: 1.476336e-05	ci right 4.990800e-05	k: 12	n:420000
Cons ci ratio: 2.506900e-03	ci left: 8.523362e-01	ci right 8.544780e-01	k: 358432	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
TMEM90B   420000 perm   126 sec   (3335 perm/sec)   p_kst 2.380952e-06   p_cons 8.534095e-01   p_joint 2.857143e-05

Joint ci ratio: 1.087195e+00	ci left: 1.442002e-05	ci right 4.874736e-05	k: 12	n:430000
Cons ci ratio: 2.476682e-03	ci left: 8.524396e-01	ci right 8.545557e-01	k: 367005	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
TMEM90B   430000 perm   130 sec   (3299 perm/sec)   p_kst 2.325581e-06   p_cons 8.535000e-01   p_joint 2.790698e-05

Joint ci ratio: 1.087195e+00	ci left: 1.409229e-05	ci right 4.763948e-05	k: 12	n:440000
Cons ci ratio: 2.448621e-03	ci left: 8.524266e-01	ci right 8.545187e-01	k: 375529	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
TMEM90B   440000 perm   135 sec   (3262 perm/sec)   p_kst 2.272727e-06   p_cons 8.534750e-01   p_joint 2.727273e-05

Joint ci ratio: 1.087195e+00	ci left: 1.377913e-05	ci right 4.658084e-05	k: 12	n:450000
Cons ci ratio: 2.420976e-03	ci left: 8.524679e-01	ci right 8.545364e-01	k: 384077	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
TMEM90B   450000 perm   139 sec   (3226 perm/sec)   p_kst 2.222222e-06   p_cons 8.535044e-01   p_joint 2.666667e-05

Joint ci ratio: 1.087196e+00	ci left: 1.347958e-05	ci right 4.556822e-05	k: 12	n:460000
Cons ci ratio: 2.394434e-03	ci left: 8.524879e-01	ci right 8.545337e-01	k: 392616	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
TMEM90B   460000 perm   144 sec   (3191 perm/sec)   p_kst 2.173913e-06   p_cons 8.535130e-01   p_joint 2.608696e-05

Joint ci ratio: 1.047647e+00	ci left: 1.472764e-05	ci right 4.729825e-05	k: 13	n:470000
Cons ci ratio: 2.370015e-03	ci left: 8.523727e-01	ci right 8.543974e-01	k: 401092	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
TMEM90B   470000 perm   149 sec   (3156 perm/sec)   p_kst 2.127660e-06   p_cons 8.533872e-01   p_joint 2.765957e-05

Joint ci ratio: 1.012123e+00	ci left: 1.594578e-05	ci right 4.893623e-05	k: 14	n:480000
Cons ci ratio: 2.345449e-03	ci left: 8.523565e-01	ci right 8.543601e-01	k: 409613	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
TMEM90B   480000 perm   154 sec   (3124 perm/sec)   p_kst 2.083333e-06   p_cons 8.533604e-01   p_joint 2.916667e-05

Joint ci ratio: 1.012123e+00	ci left: 1.562035e-05	ci right 4.793754e-05	k: 14	n:490000
Cons ci ratio: 2.322786e-03	ci left: 8.522162e-01	ci right 8.542000e-01	k: 418073	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
TMEM90B   490000 perm   158 sec   (3092 perm/sec)   p_kst 2.040816e-06   p_cons 8.532102e-01   p_joint 2.857143e-05

Joint ci ratio: 1.012123e+00	ci left: 1.530794e-05	ci right 4.697880e-05	k: 14	n:500000
Cons ci ratio: 2.299314e-03	ci left: 8.522401e-01	ci right 8.542038e-01	k: 426612	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
TMEM90B   500000 perm   163 sec   (3061 perm/sec)   p_kst 2.000000e-06   p_cons 8.532240e-01   p_joint 2.800000e-05

Joint ci ratio: 1.012124e+00	ci left: 1.500779e-05	ci right 4.605765e-05	k: 14	n:510000
Cons ci ratio: 2.276842e-03	ci left: 8.522297e-01	ci right 8.541742e-01	k: 435134	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
TMEM90B   510000 perm   168 sec   (3030 perm/sec)   p_kst 1.960784e-06   p_cons 8.532039e-01   p_joint 2.745098e-05

Joint ci ratio: 1.012124e+00	ci left: 1.471917e-05	ci right 4.517194e-05	k: 14	n:520000
Cons ci ratio: 2.254428e-03	ci left: 8.522853e-01	ci right 8.542108e-01	k: 443690	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
TMEM90B   520000 perm   174 sec   (2997 perm/sec)   p_kst 1.923077e-06   p_cons 8.532500e-01   p_joint 2.692308e-05

Joint ci ratio: 1.012124e+00	ci left: 1.444145e-05	ci right 4.431964e-05	k: 14	n:530000
Cons ci ratio: 2.232360e-03	ci left: 8.523730e-01	ci right 8.542798e-01	k: 452264	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
TMEM90B   530000 perm   179 sec   (2966 perm/sec)   p_kst 1.886792e-06   p_cons 8.533283e-01   p_joint 2.641509e-05

Joint ci ratio: 1.012125e+00	ci left: 1.417402e-05	ci right 4.349892e-05	k: 14	n:540000
Cons ci ratio: 2.212089e-03	ci left: 8.523257e-01	ci right 8.542150e-01	k: 460767	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
TMEM90B   540000 perm   184 sec   (2935 perm/sec)   p_kst 1.851852e-06   p_cons 8.532722e-01   p_joint 2.592593e-05

Joint ci ratio: 1.012125e+00	ci left: 1.391630e-05	ci right 4.270803e-05	k: 14	n:550000
Cons ci ratio: 2.192439e-03	ci left: 8.522710e-01	ci right 8.541434e-01	k: 469265	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
TMEM90B   550000 perm   189 sec   (2905 perm/sec)   p_kst 1.818182e-06   p_cons 8.532091e-01   p_joint 2.545455e-05

Joint ci ratio: 1.012125e+00	ci left: 1.366780e-05	ci right 4.194540e-05	k: 14	n:560000
Cons ci ratio: 2.173443e-03	ci left: 8.522023e-01	ci right 8.540583e-01	k: 477754	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
TMEM90B   560000 perm   195 sec   (2878 perm/sec)   p_kst 1.785714e-06   p_cons 8.531321e-01   p_joint 2.500000e-05

Joint ci ratio: 1.012125e+00	ci left: 1.342801e-05	ci right 4.120952e-05	k: 14	n:570000
Cons ci ratio: 2.154479e-03	ci left: 8.521889e-01	ci right 8.540286e-01	k: 486273	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
TMEM90B   570000 perm   200 sec   (2848 perm/sec)   p_kst 1.754386e-06   p_cons 8.531105e-01   p_joint 2.456140e-05

Joint ci ratio: 1.047651e+00	ci left: 1.193445e-05	ci right 3.832796e-05	k: 13	n:580000
Cons ci ratio: 2.135827e-03	ci left: 8.521967e-01	ci right 8.540205e-01	k: 494804	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
TMEM90B   580000 perm   206 sec   (2821 perm/sec)   p_kst 1.724138e-06   p_cons 8.531103e-01   p_joint 2.241379e-05

Joint ci ratio: 1.047651e+00	ci left: 1.173217e-05	ci right 3.767834e-05	k: 13	n:590000
Cons ci ratio: 2.117493e-03	ci left: 8.522230e-01	ci right 8.540312e-01	k: 503346	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
TMEM90B   590000 perm   211 sec   (2793 perm/sec)   p_kst 1.694915e-06   p_cons 8.531288e-01   p_joint 2.203390e-05

Joint ci ratio: 1.047651e+00	ci left: 1.153664e-05	ci right 3.705037e-05	k: 13	n:600000
Cons ci ratio: 2.099805e-03	ci left: 8.522268e-01	ci right 8.540198e-01	k: 511875	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
TMEM90B   600000 perm   217 sec   (2766 perm/sec)   p_kst 1.666667e-06   p_cons 8.531250e-01   p_joint 2.166667e-05

Joint ci ratio: 1.012126e+00	ci left: 1.254748e-05	ci right 3.850728e-05	k: 14	n:610000
Cons ci ratio: 2.082431e-03	ci left: 8.522453e-01	ci right 8.540235e-01	k: 520413	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
TMEM90B   610000 perm   223 sec   (2739 perm/sec)   p_kst 1.639344e-06   p_cons 8.531361e-01   p_joint 2.295082e-05

Joint ci ratio: 1.012127e+00	ci left: 1.234510e-05	ci right 3.788620e-05	k: 14	n:620000
Cons ci ratio: 2.065746e-03	ci left: 8.522309e-01	ci right 8.539948e-01	k: 528931	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
TMEM90B   620000 perm   229 sec   (2713 perm/sec)   p_kst 1.612903e-06   p_cons 8.531145e-01   p_joint 2.258065e-05

Joint ci ratio: 1.047652e+00	ci left: 1.098727e-05	ci right 3.528608e-05	k: 13	n:630000
Cons ci ratio: 2.049936e-03	ci left: 8.521582e-01	ci right 8.539084e-01	k: 537412	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
TMEM90B   630000 perm   234 sec   (2687 perm/sec)   p_kst 1.587302e-06   p_cons 8.530349e-01   p_joint 2.063492e-05

Joint ci ratio: 1.047652e+00	ci left: 1.081559e-05	ci right 3.473474e-05	k: 13	n:640000
Cons ci ratio: 2.034192e-03	ci left: 8.521238e-01	ci right 8.538605e-01	k: 545916	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
TMEM90B   640000 perm   241 sec   (2661 perm/sec)   p_kst 1.562500e-06   p_cons 8.529937e-01   p_joint 2.031250e-05

Joint ci ratio: 1.012127e+00	ci left: 1.177533e-05	ci right 3.613761e-05	k: 14	n:650000
Cons ci ratio: 2.018520e-03	ci left: 8.521260e-01	ci right 8.538493e-01	k: 554443	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
TMEM90B   650000 perm   247 sec   (2637 perm/sec)   p_kst 1.538462e-06   p_cons 8.529892e-01   p_joint 2.153846e-05

Joint ci ratio: 1.087201e+00	ci left: 9.394845e-06	ci right 3.175976e-05	k: 12	n:660000
Cons ci ratio: 2.003326e-03	ci left: 8.521130e-01	ci right 8.538233e-01	k: 562960	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
TMEM90B   660000 perm   253 sec   (2612 perm/sec)   p_kst 1.515152e-06   p_cons 8.529697e-01   p_joint 1.818182e-05

Joint ci ratio: 1.047652e+00	ci left: 1.033131e-05	ci right 3.317947e-05	k: 13	n:670000
Cons ci ratio: 1.988067e-03	ci left: 8.521513e-01	ci right 8.538486e-01	k: 571511	n:670000
KS ci ratio: 2.263206e+00	ci left: 3.615066e-07	ci right 1.078307e-05	k: 2	n:670000
TMEM90B   670000 perm   259 sec   (2588 perm/sec)   p_kst 2.985075e-06   p_cons 8.530015e-01   p_joint 1.940299e-05

Joint ci ratio: 1.131596e+00	ci left: 8.075263e-06	ci right 2.894399e-05	k: 11	n:680000
Cons ci ratio: 1.973696e-03	ci left: 8.521193e-01	ci right 8.538042e-01	k: 580015	n:680000
KS ci ratio: 2.263206e+00	ci left: 3.561903e-07	ci right 1.062450e-05	k: 2	n:680000
TMEM90B   680000 perm   265 sec   (2563 perm/sec)   p_kst 2.941176e-06   p_cons 8.529632e-01   p_joint 1.617647e-05

Joint ci ratio: 1.131596e+00	ci left: 7.958229e-06	ci right 2.852451e-05	k: 11	n:690000
Cons ci ratio: 1.959281e-03	ci left: 8.521332e-01	ci right 8.538058e-01	k: 588550	n:690000
KS ci ratio: 2.263206e+00	ci left: 3.510281e-07	ci right 1.047052e-05	k: 2	n:690000
TMEM90B   690000 perm   272 sec   (2540 perm/sec)   p_kst 2.898551e-06   p_cons 8.529710e-01   p_joint 1.594203e-05

Joint ci ratio: 1.131596e+00	ci left: 7.844540e-06	ci right 2.811702e-05	k: 11	n:700000
Cons ci ratio: 1.944745e-03	ci left: 8.522027e-01	ci right 8.538630e-01	k: 597124	n:700000
KS ci ratio: 2.263207e+00	ci left: 3.460134e-07	ci right 1.032094e-05	k: 2	n:700000
TMEM90B   700000 perm   278 sec   (2517 perm/sec)   p_kst 2.857143e-06   p_cons 8.530343e-01   p_joint 1.571429e-05

Joint ci ratio: 1.131596e+00	ci left: 7.734053e-06	ci right 2.772101e-05	k: 11	n:710000
Cons ci ratio: 1.931211e-03	ci left: 8.521812e-01	ci right 8.538300e-01	k: 605635	n:710000
KS ci ratio: 2.263207e+00	ci left: 3.411400e-07	ci right 1.017558e-05	k: 2	n:710000
TMEM90B   710000 perm   285 sec   (2495 perm/sec)   p_kst 2.816901e-06   p_cons 8.530070e-01   p_joint 1.549296e-05

Joint ci ratio: 1.131596e+00	ci left: 7.626636e-06	ci right 2.733600e-05	k: 11	n:720000
Cons ci ratio: 1.917636e-03	ci left: 8.522022e-01	ci right 8.538394e-01	k: 614176	n:720000
KS ci ratio: 2.263207e+00	ci left: 3.364020e-07	ci right 1.003425e-05	k: 2	n:720000
TMEM90B   720000 perm   291 sec   (2474 perm/sec)   p_kst 2.777778e-06   p_cons 8.530222e-01   p_joint 1.527778e-05

Joint ci ratio: 1.131596e+00	ci left: 7.522161e-06	ci right 2.696154e-05	k: 11	n:730000
Cons ci ratio: 1.904438e-03	ci left: 8.522103e-01	ci right 8.538362e-01	k: 622708	n:730000
KS ci ratio: 2.263207e+00	ci left: 3.317937e-07	ci right 9.896797e-06	k: 2	n:730000
TMEM90B   730000 perm   298 sec   (2452 perm/sec)   p_kst 2.739726e-06   p_cons 8.530247e-01   p_joint 1.506849e-05

Joint ci ratio: 1.131597e+00	ci left: 7.420510e-06	ci right 2.659719e-05	k: 11	n:740000
Cons ci ratio: 1.890744e-03	ci left: 8.523198e-01	ci right 8.539342e-01	k: 631315	n:740000
KS ci ratio: 2.263207e+00	ci left: 3.273100e-07	ci right 9.763057e-06	k: 2	n:740000
TMEM90B   740000 perm   304 sec   (2431 perm/sec)   p_kst 2.702703e-06   p_cons 8.531284e-01   p_joint 1.486486e-05

Joint ci ratio: 1.131597e+00	ci left: 7.321569e-06	ci right 2.624257e-05	k: 11	n:750000
Cons ci ratio: 1.878090e-03	ci left: 8.523262e-01	ci right 8.539297e-01	k: 639847	n:750000
KS ci ratio: 2.263207e+00	ci left: 3.229459e-07	ci right 9.632883e-06	k: 2	n:750000
TMEM90B   750000 perm   311 sec   (2410 perm/sec)   p_kst 2.666667e-06   p_cons 8.531293e-01   p_joint 1.466667e-05

Joint ci ratio: 1.131597e+00	ci left: 7.225232e-06	ci right 2.589727e-05	k: 11	n:760000
Cons ci ratio: 1.866244e-03	ci left: 8.522573e-01	ci right 8.538506e-01	k: 648322	n:760000
KS ci ratio: 2.263207e+00	ci left: 3.186966e-07	ci right 9.506135e-06	k: 2	n:760000
TMEM90B   760000 perm   318 sec   (2391 perm/sec)   p_kst 2.631579e-06   p_cons 8.530553e-01   p_joint 1.447368e-05

Joint ci ratio: 1.131597e+00	ci left: 7.131398e-06	ci right 2.556094e-05	k: 11	n:770000
Cons ci ratio: 1.854812e-03	ci left: 8.521641e-01	ci right 8.537475e-01	k: 656777	n:770000
KS ci ratio: 2.263207e+00	ci left: 3.145577e-07	ci right 9.382679e-06	k: 2	n:770000
TMEM90B   770000 perm   325 sec   (2371 perm/sec)   p_kst 2.597403e-06   p_cons 8.529571e-01   p_joint 1.428571e-05

Joint ci ratio: 1.131597e+00	ci left: 7.039970e-06	ci right 2.523324e-05	k: 11	n:780000
Cons ci ratio: 1.842437e-03	ci left: 8.522302e-01	ci right 8.538031e-01	k: 665354	n:780000
KS ci ratio: 2.263207e+00	ci left: 3.105249e-07	ci right 9.262389e-06	k: 2	n:780000
TMEM90B   780000 perm   332 sec   (2352 perm/sec)   p_kst 2.564103e-06   p_cons 8.530179e-01   p_joint 1.410256e-05

Joint ci ratio: 1.131597e+00	ci left: 6.950856e-06	ci right 2.491384e-05	k: 11	n:790000
Cons ci ratio: 1.830916e-03	ci left: 8.522109e-01	ci right 8.537739e-01	k: 673865	n:790000
KS ci ratio: 2.263207e+00	ci left: 3.065942e-07	ci right 9.145144e-06	k: 2	n:790000
TMEM90B   790000 perm   339 sec   (2333 perm/sec)   p_kst 2.531646e-06   p_cons 8.529937e-01   p_joint 1.392405e-05

Joint ci ratio: 1.131597e+00	ci left: 6.863970e-06	ci right 2.460241e-05	k: 11	n:800000
Cons ci ratio: 1.819572e-03	ci left: 8.521971e-01	ci right 8.537504e-01	k: 682380	n:800000
KS ci ratio: 2.263207e+00	ci left: 3.027617e-07	ci right 9.030830e-06	k: 2	n:800000
TMEM90B   800000 perm   346 sec   (2315 perm/sec)   p_kst 2.500000e-06   p_cons 8.529750e-01   p_joint 1.375000e-05

Joint ci ratio: 1.131597e+00	ci left: 6.779229e-06	ci right 2.429868e-05	k: 11	n:810000
Cons ci ratio: 1.808570e-03	ci left: 8.521651e-01	ci right 8.537089e-01	k: 690880	n:810000
KS ci ratio: 2.263207e+00	ci left: 2.990239e-07	ci right 8.919339e-06	k: 2	n:810000
TMEM90B   810000 perm   353 sec   (2297 perm/sec)   p_kst 2.469136e-06   p_cons 8.529383e-01   p_joint 1.358025e-05

Joint ci ratio: 1.181916e+00	ci left: 5.848050e-06	ci right 2.242715e-05	k: 10	n:820000
Cons ci ratio: 1.797704e-03	ci left: 8.521425e-01	ci right 8.536770e-01	k: 699387	n:820000
KS ci ratio: 2.263208e+00	ci left: 2.953773e-07	ci right 8.810567e-06	k: 2	n:820000
TMEM90B   820000 perm   360 sec   (2278 perm/sec)   p_kst 2.439024e-06   p_cons 8.529110e-01   p_joint 1.219512e-05

Joint ci ratio: 1.181916e+00	ci left: 5.777591e-06	ci right 2.215694e-05	k: 10	n:830000
Cons ci ratio: 1.786310e-03	ci left: 8.522219e-01	ci right 8.537467e-01	k: 707978	n:830000
KS ci ratio: 2.263208e+00	ci left: 2.918185e-07	ci right 8.704416e-06	k: 2	n:830000
TMEM90B   830000 perm   367 sec   (2260 perm/sec)   p_kst 2.409639e-06   p_cons 8.529855e-01   p_joint 1.204819e-05

Joint ci ratio: 1.131598e+00	ci left: 6.537113e-06	ci right 2.343088e-05	k: 11	n:840000
Cons ci ratio: 1.775788e-03	ci left: 8.522063e-01	ci right 8.537222e-01	k: 716491	n:840000
KS ci ratio: 1.959994e+00	ci left: 7.365150e-07	ci right 1.043719e-05	k: 3	n:840000
TMEM90B   840000 perm   375 sec   (2242 perm/sec)   p_kst 3.571429e-06   p_cons 8.529655e-01   p_joint 1.309524e-05

Joint ci ratio: 1.131598e+00	ci left: 6.460206e-06	ci right 2.315522e-05	k: 11	n:850000
Cons ci ratio: 1.765879e-03	ci left: 8.521299e-01	ci right 8.536371e-01	k: 724952	n:850000
KS ci ratio: 1.959994e+00	ci left: 7.278501e-07	ci right 1.031440e-05	k: 3	n:850000
TMEM90B   850000 perm   382 sec   (2224 perm/sec)   p_kst 3.529412e-06   p_cons 8.528847e-01   p_joint 1.294118e-05

Joint ci ratio: 1.131598e+00	ci left: 6.385087e-06	ci right 2.288598e-05	k: 11	n:860000
Cons ci ratio: 1.755500e-03	ci left: 8.521461e-01	ci right 8.536445e-01	k: 733491	n:860000
KS ci ratio: 1.959994e+00	ci left: 7.193868e-07	ci right 1.019447e-05	k: 3	n:860000
TMEM90B   860000 perm   390 sec   (2207 perm/sec)   p_kst 3.488372e-06   p_cons 8.528965e-01   p_joint 1.279070e-05

Joint ci ratio: 1.131598e+00	ci left: 6.311695e-06	ci right 2.262292e-05	k: 11	n:870000
Cons ci ratio: 1.745661e-03	ci left: 8.521102e-01	ci right 8.536001e-01	k: 741985	n:870000
KS ci ratio: 1.959994e+00	ci left: 7.111179e-07	ci right 1.007729e-05	k: 3	n:870000
TMEM90B   870000 perm   397 sec   (2190 perm/sec)   p_kst 3.448276e-06   p_cons 8.528563e-01   p_joint 1.264368e-05

Joint ci ratio: 1.131598e+00	ci left: 6.239971e-06	ci right 2.236584e-05	k: 11	n:880000
Cons ci ratio: 1.736120e-03	ci left: 8.520557e-01	ci right 8.535374e-01	k: 750462	n:880000
KS ci ratio: 1.959994e+00	ci left: 7.030371e-07	ci right 9.962778e-06	k: 3	n:880000
TMEM90B   880000 perm   405 sec   (2173 perm/sec)   p_kst 3.409091e-06   p_cons 8.527977e-01   p_joint 1.250000e-05

Joint ci ratio: 1.131598e+00	ci left: 6.169859e-06	ci right 2.211454e-05	k: 11	n:890000
Cons ci ratio: 1.726508e-03	ci left: 8.520352e-01	ci right 8.535086e-01	k: 758968	n:890000
KS ci ratio: 1.959994e+00	ci left: 6.951378e-07	ci right 9.850837e-06	k: 3	n:890000
TMEM90B   890000 perm   413 sec   (2157 perm/sec)   p_kst 3.370787e-06   p_cons 8.527730e-01   p_joint 1.235955e-05

Joint ci ratio: 1.131598e+00	ci left: 6.101305e-06	ci right 2.186883e-05	k: 11	n:900000
Cons ci ratio: 1.717032e-03	ci left: 8.520184e-01	ci right 8.534837e-01	k: 767477	n:900000
KS ci ratio: 1.959995e+00	ci left: 6.874140e-07	ci right 9.741383e-06	k: 3	n:900000
TMEM90B   900000 perm   420 sec   (2141 perm/sec)   p_kst 3.333333e-06   p_cons 8.527522e-01   p_joint 1.222222e-05

Joint ci ratio: 1.131598e+00	ci left: 6.034257e-06	ci right 2.162851e-05	k: 11	n:910000
Cons ci ratio: 1.707822e-03	ci left: 8.519856e-01	ci right 8.534429e-01	k: 775971	n:910000
KS ci ratio: 1.959995e+00	ci left: 6.798600e-07	ci right 9.634335e-06	k: 3	n:910000
TMEM90B   910000 perm   428 sec   (2126 perm/sec)   p_kst 3.296703e-06   p_cons 8.527154e-01   p_joint 1.208791e-05

Joint ci ratio: 1.131599e+00	ci left: 5.968667e-06	ci right 2.139342e-05	k: 11	n:920000
Cons ci ratio: 1.698332e-03	ci left: 8.520166e-01	ci right 8.534659e-01	k: 784523	n:920000
KS ci ratio: 1.959995e+00	ci left: 6.724702e-07	ci right 9.529615e-06	k: 3	n:920000
TMEM90B   920000 perm   436 sec   (2111 perm/sec)   p_kst 3.260870e-06   p_cons 8.527424e-01   p_joint 1.195652e-05

Joint ci ratio: 1.131599e+00	ci left: 5.904488e-06	ci right 2.116338e-05	k: 11	n:930000
Cons ci ratio: 1.689383e-03	ci left: 8.519899e-01	ci right 8.534315e-01	k: 793022	n:930000
KS ci ratio: 1.959995e+00	ci left: 6.652393e-07	ci right 9.427146e-06	k: 3	n:930000
TMEM90B   930000 perm   444 sec   (2097 perm/sec)   p_kst 3.225806e-06   p_cons 8.527118e-01   p_joint 1.182796e-05

Joint ci ratio: 1.131599e+00	ci left: 5.841674e-06	ci right 2.093824e-05	k: 11	n:940000
Cons ci ratio: 1.680558e-03	ci left: 8.519659e-01	ci right 8.534000e-01	k: 801523	n:940000
KS ci ratio: 1.959995e+00	ci left: 6.581623e-07	ci right 9.326858e-06	k: 3	n:940000
TMEM90B   940000 perm   452 sec   (2082 perm/sec)   p_kst 3.191489e-06   p_cons 8.526840e-01   p_joint 1.170213e-05

Joint ci ratio: 1.131599e+00	ci left: 5.780183e-06	ci right 2.071784e-05	k: 11	n:950000
Cons ci ratio: 1.671380e-03	ci left: 8.520163e-01	ci right 8.534426e-01	k: 810094	n:950000
KS ci ratio: 1.959995e+00	ci left: 6.512343e-07	ci right 9.228680e-06	k: 3	n:950000
TMEM90B   950000 perm   460 sec   (2067 perm/sec)   p_kst 3.157895e-06   p_cons 8.527305e-01   p_joint 1.157895e-05

Joint ci ratio: 1.131599e+00	ci left: 5.719972e-06	ci right 2.050203e-05	k: 11	n:960000
Cons ci ratio: 1.662400e-03	ci left: 8.520584e-01	ci right 8.534770e-01	k: 818658	n:960000
KS ci ratio: 1.959995e+00	ci left: 6.444506e-07	ci right 9.132549e-06	k: 3	n:960000
TMEM90B   960000 perm   468 sec   (2053 perm/sec)   p_kst 3.125000e-06   p_cons 8.527687e-01   p_joint 1.145833e-05

Joint ci ratio: 1.087205e+00	ci left: 6.392361e-06	ci right 2.160978e-05	k: 12	n:970000
Cons ci ratio: 1.653833e-03	ci left: 8.520582e-01	ci right 8.534696e-01	k: 827182	n:970000
KS ci ratio: 1.959995e+00	ci left: 6.378068e-07	ci right 9.038399e-06	k: 3	n:970000
TMEM90B   970000 perm   476 sec   (2038 perm/sec)   p_kst 3.092784e-06   p_cons 8.527649e-01   p_joint 1.237113e-05

Joint ci ratio: 1.239606e+00	ci left: 4.199369e-06	ci right 1.743340e-05	k: 9	n:980000
Cons ci ratio: 1.645304e-03	ci left: 8.520724e-01	ci right 8.534765e-01	k: 835720	n:980000
KS ci ratio: 1.959995e+00	ci left: 6.312985e-07	ci right 8.946171e-06	k: 3	n:980000
TMEM90B   980000 perm   484 sec   (2024 perm/sec)   p_kst 3.061224e-06   p_cons 8.527755e-01   p_joint 9.183673e-06

Joint ci ratio: 1.239606e+00	ci left: 4.156951e-06	ci right 1.725731e-05	k: 9	n:990000
Cons ci ratio: 1.637209e-03	ci left: 8.520398e-01	ci right 8.534369e-01	k: 844212	n:990000
KS ci ratio: 1.959995e+00	ci left: 6.249218e-07	ci right 8.855806e-06	k: 3	n:990000
TMEM90B   990000 perm   493 sec   (2010 perm/sec)   p_kst 3.030303e-06   p_cons 8.527394e-01   p_joint 9.090909e-06

Joint ci ratio: 1.181917e+00	ci left: 4.795399e-06	ci right 1.839028e-05	k: 10	n:1000000
Cons ci ratio: 1.629025e-03	ci left: 8.520399e-01	ci right 8.534300e-01	k: 852736	n:1000000
KS ci ratio: 1.959995e+00	ci left: 6.186726e-07	ci right 8.767248e-06	k: 3	n:1000000
TMEM90B   1000000 perm   501 sec   (1996 perm/sec)   p_kst 3.000000e-06   p_cons 8.527360e-01   p_joint 1.000000e-05

Joint ci ratio: 1.131599e+00	ci left: 5.436805e-06	ci right 1.948708e-05	k: 11	n:1010000
Cons ci ratio: 1.620974e-03	ci left: 8.520381e-01	ci right 8.534213e-01	k: 861258	n:1010000
KS ci ratio: 1.959995e+00	ci left: 6.125471e-07	ci right 8.680444e-06	k: 3	n:1010000
TMEM90B   1010000 perm   509 sec   (1983 perm/sec)   p_kst 2.970297e-06   p_cons 8.527307e-01   p_joint 1.089109e-05

Joint ci ratio: 1.131599e+00	ci left: 5.383502e-06	ci right 1.929603e-05	k: 11	n:1020000
Cons ci ratio: 1.613200e-03	ci left: 8.520117e-01	ci right 8.533882e-01	k: 869755	n:1020000
KS ci ratio: 1.959995e+00	ci left: 6.065417e-07	ci right 8.595341e-06	k: 3	n:1020000
TMEM90B   1020000 perm   518 sec   (1970 perm/sec)   p_kst 2.941176e-06   p_cons 8.527010e-01   p_joint 1.078431e-05

Joint ci ratio: 1.131599e+00	ci left: 5.331235e-06	ci right 1.910869e-05	k: 11	n:1030000
Cons ci ratio: 1.605430e-03	ci left: 8.520024e-01	ci right 8.533723e-01	k: 878269	n:1030000
KS ci ratio: 1.959995e+00	ci left: 6.006529e-07	ci right 8.511892e-06	k: 3	n:1030000
TMEM90B   1030000 perm   527 sec   (1956 perm/sec)   p_kst 2.912621e-06   p_cons 8.526883e-01   p_joint 1.067961e-05

Joint ci ratio: 1.131599e+00	ci left: 5.279973e-06	ci right 1.892496e-05	k: 11	n:1040000
Cons ci ratio: 1.597533e-03	ci left: 8.520309e-01	ci right 8.533941e-01	k: 886822	n:1040000
KS ci ratio: 1.959995e+00	ci left: 5.948774e-07	ci right 8.430047e-06	k: 3	n:1040000
TMEM90B   1040000 perm   535 sec   (1942 perm/sec)   p_kst 2.884615e-06   p_cons 8.527135e-01   p_joint 1.057692e-05

Joint ci ratio: 1.131600e+00	ci left: 5.229688e-06	ci right 1.874472e-05	k: 11	n:1050000
Cons ci ratio: 1.590246e-03	ci left: 8.519806e-01	ci right 8.533375e-01	k: 895293	n:1050000
KS ci ratio: 1.959995e+00	ci left: 5.892119e-07	ci right 8.349761e-06	k: 3	n:1050000
TMEM90B   1050000 perm   544 sec   (1929 perm/sec)   p_kst 2.857143e-06   p_cons 8.526600e-01   p_joint 1.047619e-05

Joint ci ratio: 1.131600e+00	ci left: 5.180351e-06	ci right 1.856788e-05	k: 11	n:1060000
Cons ci ratio: 1.582725e-03	ci left: 8.519842e-01	ci right 8.533346e-01	k: 903820	n:1060000
KS ci ratio: 1.959995e+00	ci left: 5.836533e-07	ci right 8.270990e-06	k: 3	n:1060000
TMEM90B   1060000 perm   553 sec   (1916 perm/sec)   p_kst 2.830189e-06   p_cons 8.526604e-01   p_joint 1.037736e-05

Joint ci ratio: 1.131600e+00	ci left: 5.131936e-06	ci right 1.839435e-05	k: 11	n:1070000
Cons ci ratio: 1.575081e-03	ci left: 8.520243e-01	ci right 8.533682e-01	k: 912386	n:1070000
KS ci ratio: 1.959995e+00	ci left: 5.781986e-07	ci right 8.193691e-06	k: 3	n:1070000
TMEM90B   1070000 perm   562 sec   (1903 perm/sec)   p_kst 2.803738e-06   p_cons 8.526972e-01   p_joint 1.028037e-05

Joint ci ratio: 1.131600e+00	ci left: 5.084418e-06	ci right 1.822404e-05	k: 11	n:1080000
Cons ci ratio: 1.567766e-03	ci left: 8.520283e-01	ci right 8.533661e-01	k: 920914	n:1080000
KS ci ratio: 1.959995e+00	ci left: 5.728449e-07	ci right 8.117824e-06	k: 3	n:1080000
TMEM90B   1080000 perm   571 sec   (1890 perm/sec)   p_kst 2.777778e-06   p_cons 8.526981e-01   p_joint 1.018519e-05

Joint ci ratio: 1.131600e+00	ci left: 5.037772e-06	ci right 1.805684e-05	k: 11	n:1090000
Cons ci ratio: 1.560529e-03	ci left: 8.520360e-01	ci right 8.533676e-01	k: 929446	n:1090000
KS ci ratio: 1.959996e+00	ci left: 5.675895e-07	ci right 8.043349e-06	k: 3	n:1090000
TMEM90B   1090000 perm   581 sec   (1877 perm/sec)   p_kst 2.752294e-06   p_cons 8.527028e-01   p_joint 1.009174e-05

Joint ci ratio: 1.131600e+00	ci left: 4.991974e-06	ci right 1.789269e-05	k: 11	n:1100000
Cons ci ratio: 1.553397e-03	ci left: 8.520427e-01	ci right 8.533682e-01	k: 937977	n:1100000
KS ci ratio: 1.959996e+00	ci left: 5.624296e-07	ci right 7.970227e-06	k: 3	n:1100000
TMEM90B   1100000 perm   590 sec   (1864 perm/sec)   p_kst 2.727273e-06   p_cons 8.527064e-01   p_joint 1.000000e-05

Joint ci ratio: 1.131600e+00	ci left: 4.947001e-06	ci right 1.773150e-05	k: 11	n:1110000
Cons ci ratio: 1.546484e-03	ci left: 8.520294e-01	ci right 8.533489e-01	k: 946486	n:1110000
KS ci ratio: 1.959996e+00	ci left: 5.573626e-07	ci right 7.898424e-06	k: 3	n:1110000
TMEM90B   1110000 perm   599 sec   (1852 perm/sec)   p_kst 2.702703e-06   p_cons 8.526901e-01   p_joint 9.909910e-06

Joint ci ratio: 1.131600e+00	ci left: 4.902832e-06	ci right 1.757318e-05	k: 11	n:1120000
Cons ci ratio: 1.539504e-03	ci left: 8.520423e-01	ci right 8.533559e-01	k: 955024	n:1120000
KS ci ratio: 1.959996e+00	ci left: 5.523862e-07	ci right 7.827902e-06	k: 3	n:1120000
TMEM90B   1120000 perm   608 sec   (1841 perm/sec)   p_kst 2.678571e-06   p_cons 8.527000e-01   p_joint 9.821429e-06

Joint ci ratio: 1.131600e+00	ci left: 4.859444e-06	ci right 1.741767e-05	k: 11	n:1130000
Cons ci ratio: 1.532639e-03	ci left: 8.520514e-01	ci right 8.533592e-01	k: 963558	n:1130000
KS ci ratio: 1.959996e+00	ci left: 5.474978e-07	ci right 7.758629e-06	k: 3	n:1130000
TMEM90B   1130000 perm   618 sec   (1830 perm/sec)   p_kst 2.654867e-06   p_cons 8.527062e-01   p_joint 9.734513e-06

Joint ci ratio: 1.131600e+00	ci left: 4.816817e-06	ci right 1.726488e-05	k: 11	n:1140000
Cons ci ratio: 1.525918e-03	ci left: 8.520516e-01	ci right 8.533536e-01	k: 972082	n:1140000
KS ci ratio: 1.959996e+00	ci left: 5.426952e-07	ci right 7.690571e-06	k: 3	n:1140000
TMEM90B   1140000 perm   627 sec   (1818 perm/sec)   p_kst 2.631579e-06   p_cons 8.527035e-01   p_joint 9.649123e-06

Joint ci ratio: 1.087206e+00	ci left: 5.391816e-06	ci right 1.822739e-05	k: 12	n:1150000
Cons ci ratio: 1.519496e-03	ci left: 8.520170e-01	ci right 8.533134e-01	k: 980566	n:1150000
KS ci ratio: 1.753073e+00	ci left: 9.477098e-07	ci right 8.905705e-06	k: 4	n:1150000
TMEM90B   1150000 perm   637 sec   (1807 perm/sec)   p_kst 3.478261e-06   p_cons 8.526661e-01   p_joint 1.043478e-05

Joint ci ratio: 1.181918e+00	ci left: 4.133963e-06	ci right 1.585370e-05	k: 10	n:1160000
Cons ci ratio: 1.513107e-03	ci left: 8.519907e-01	ci right 8.532817e-01	k: 989059	n:1160000
KS ci ratio: 1.753073e+00	ci left: 9.395399e-07	ci right 8.828932e-06	k: 4	n:1160000
TMEM90B   1160000 perm   646 sec   (1794 perm/sec)   p_kst 3.448276e-06   p_cons 8.526371e-01   p_joint 8.620690e-06

Joint ci ratio: 1.181918e+00	ci left: 4.098630e-06	ci right 1.571820e-05	k: 10	n:1170000
Cons ci ratio: 1.506726e-03	ci left: 8.519769e-01	ci right 8.532624e-01	k: 997566	n:1170000
KS ci ratio: 1.753073e+00	ci left: 9.315096e-07	ci right 8.753471e-06	k: 4	n:1170000
TMEM90B   1170000 perm   656 sec   (1783 perm/sec)   p_kst 3.418803e-06   p_cons 8.526205e-01   p_joint 8.547009e-06

Joint ci ratio: 1.181918e+00	ci left: 4.063896e-06	ci right 1.558499e-05	k: 10	n:1180000
Cons ci ratio: 1.500061e-03	ci left: 8.520245e-01	ci right 8.533043e-01	k: 1006145	n:1180000
KS ci ratio: 1.753073e+00	ci left: 9.236155e-07	ci right 8.679289e-06	k: 4	n:1180000
TMEM90B   1180000 perm   666 sec   (1771 perm/sec)   p_kst 3.389831e-06   p_cons 8.526653e-01   p_joint 8.474576e-06

Joint ci ratio: 1.181919e+00	ci left: 4.029746e-06	ci right 1.545403e-05	k: 10	n:1190000
Cons ci ratio: 1.493763e-03	ci left: 8.520241e-01	ci right 8.532986e-01	k: 1014668	n:1190000
KS ci ratio: 1.753073e+00	ci left: 9.158540e-07	ci right 8.606354e-06	k: 4	n:1190000
TMEM90B   1190000 perm   676 sec   (1760 perm/sec)   p_kst 3.361345e-06   p_cons 8.526622e-01   p_joint 8.403361e-06

Joint ci ratio: 1.181919e+00	ci left: 3.996164e-06	ci right 1.532524e-05	k: 10	n:1200000
Cons ci ratio: 1.487124e-03	ci left: 8.520947e-01	ci right 8.533636e-01	k: 1023276	n:1200000
KS ci ratio: 1.753073e+00	ci left: 9.082219e-07	ci right 8.534635e-06	k: 4	n:1200000
TMEM90B   1200000 perm   686 sec   (1750 perm/sec)   p_kst 3.333333e-06   p_cons 8.527300e-01   p_joint 8.333333e-06

Joint ci ratio: 1.181919e+00	ci left: 3.963138e-06	ci right 1.519859e-05	k: 10	n:1210000
Cons ci ratio: 1.480841e-03	ci left: 8.521186e-01	ci right 8.533822e-01	k: 1031829	n:1210000
KS ci ratio: 1.753073e+00	ci left: 9.007159e-07	ci right 8.464101e-06	k: 4	n:1210000
TMEM90B   1210000 perm   696 sec   (1739 perm/sec)   p_kst 3.305785e-06   p_cons 8.527512e-01   p_joint 8.264463e-06

Joint ci ratio: 1.181919e+00	ci left: 3.930653e-06	ci right 1.507401e-05	k: 10	n:1220000
Cons ci ratio: 1.474464e-03	ci left: 8.521717e-01	ci right 8.534299e-01	k: 1040418	n:1220000
KS ci ratio: 1.753073e+00	ci left: 8.933330e-07	ci right 8.394723e-06	k: 4	n:1220000
TMEM90B   1220000 perm   706 sec   (1729 perm/sec)   p_kst 3.278689e-06   p_cons 8.528016e-01   p_joint 8.196721e-06

Joint ci ratio: 1.181919e+00	ci left: 3.898697e-06	ci right 1.495146e-05	k: 10	n:1230000
Cons ci ratio: 1.468705e-03	ci left: 8.521319e-01	ci right 8.533851e-01	k: 1048894	n:1230000
KS ci ratio: 1.753073e+00	ci left: 8.860701e-07	ci right 8.326474e-06	k: 4	n:1230000
TMEM90B   1230000 perm   716 sec   (1718 perm/sec)   p_kst 3.252033e-06   p_cons 8.527593e-01   p_joint 8.130081e-06

Joint ci ratio: 1.181919e+00	ci left: 3.867256e-06	ci right 1.483088e-05	k: 10	n:1240000
Cons ci ratio: 1.462417e-03	ci left: 8.521954e-01	ci right 8.534433e-01	k: 1057497	n:1240000
KS ci ratio: 1.753073e+00	ci left: 8.789244e-07	ci right 8.259325e-06	k: 4	n:1240000
TMEM90B   1240000 perm   726 sec   (1709 perm/sec)   p_kst 3.225806e-06   p_cons 8.528202e-01   p_joint 8.064516e-06

Joint ci ratio: 1.181919e+00	ci left: 3.836317e-06	ci right 1.471224e-05	k: 10	n:1250000
Cons ci ratio: 1.456542e-03	ci left: 8.522001e-01	ci right 8.534431e-01	k: 1066028	n:1250000
KS ci ratio: 1.753073e+00	ci left: 8.718930e-07	ci right 8.193250e-06	k: 4	n:1250000
TMEM90B   1250000 perm   736 sec   (1699 perm/sec)   p_kst 3.200000e-06   p_cons 8.528224e-01   p_joint 8.000000e-06

Joint ci ratio: 1.181919e+00	ci left: 3.805870e-06	ci right 1.459547e-05	k: 10	n:1260000
Cons ci ratio: 1.450596e-03	ci left: 8.522294e-01	ci right 8.534673e-01	k: 1074590	n:1260000
KS ci ratio: 1.753073e+00	ci left: 8.649732e-07	ci right 8.128225e-06	k: 4	n:1260000
TMEM90B   1260000 perm   746 sec   (1689 perm/sec)   p_kst 3.174603e-06   p_cons 8.528492e-01   p_joint 7.936508e-06

Joint ci ratio: 1.181919e+00	ci left: 3.775903e-06	ci right 1.448055e-05	k: 10	n:1270000
Cons ci ratio: 1.444821e-03	ci left: 8.522410e-01	ci right 8.534740e-01	k: 1083130	n:1270000
KS ci ratio: 1.753073e+00	ci left: 8.581624e-07	ci right 8.064223e-06	k: 4	n:1270000
TMEM90B   1270000 perm   756 sec   (1679 perm/sec)   p_kst 3.149606e-06   p_cons 8.528583e-01   p_joint 7.874016e-06

Joint ci ratio: 1.181919e+00	ci left: 3.746404e-06	ci right 1.436742e-05	k: 10	n:1280000
Cons ci ratio: 1.438941e-03	ci left: 8.522828e-01	ci right 8.535109e-01	k: 1091709	n:1280000
KS ci ratio: 1.753073e+00	ci left: 8.514580e-07	ci right 8.001222e-06	k: 4	n:1280000
TMEM90B   1280000 perm   767 sec   (1670 perm/sec)   p_kst 3.125000e-06   p_cons 8.528977e-01   p_joint 7.812500e-06

Joint ci ratio: 1.181919e+00	ci left: 3.717362e-06	ci right 1.425604e-05	k: 10	n:1290000
Cons ci ratio: 1.433348e-03	ci left: 8.522860e-01	ci right 8.535093e-01	k: 1100239	n:1290000
KS ci ratio: 1.753073e+00	ci left: 8.448575e-07	ci right 7.939197e-06	k: 4	n:1290000
TMEM90B   1290000 perm   777 sec   (1660 perm/sec)   p_kst 3.100775e-06   p_cons 8.528984e-01   p_joint 7.751938e-06

Joint ci ratio: 1.181919e+00	ci left: 3.688767e-06	ci right 1.414638e-05	k: 10	n:1300000
Cons ci ratio: 1.427689e-03	ci left: 8.523123e-01	ci right 8.535307e-01	k: 1108799	n:1300000
KS ci ratio: 1.753073e+00	ci left: 8.383586e-07	ci right 7.878126e-06	k: 4	n:1300000
TMEM90B   1300000 perm   788 sec   (1650 perm/sec)   p_kst 3.076923e-06   p_cons 8.529223e-01   p_joint 7.692308e-06

Joint ci ratio: 1.181919e+00	ci left: 3.660608e-06	ci right 1.403839e-05	k: 10	n:1310000
Cons ci ratio: 1.422247e-03	ci left: 8.523114e-01	ci right 8.535252e-01	k: 1117324	n:1310000
KS ci ratio: 1.753073e+00	ci left: 8.319589e-07	ci right 7.817988e-06	k: 4	n:1310000
TMEM90B   1310000 perm   799 sec   (1641 perm/sec)   p_kst 3.053435e-06   p_cons 8.529191e-01   p_joint 7.633588e-06

Joint ci ratio: 1.131601e+00	ci left: 4.159977e-06	ci right 1.491059e-05	k: 11	n:1320000
Cons ci ratio: 1.416803e-03	ci left: 8.523219e-01	ci right 8.535311e-01	k: 1125864	n:1320000
KS ci ratio: 1.753073e+00	ci left: 8.256562e-07	ci right 7.758761e-06	k: 4	n:1320000
TMEM90B   1320000 perm   809 sec   (1632 perm/sec)   p_kst 3.030303e-06   p_cons 8.529273e-01   p_joint 8.333333e-06

Joint ci ratio: 1.131601e+00	ci left: 4.128699e-06	ci right 1.479848e-05	k: 11	n:1330000
Cons ci ratio: 1.411549e-03	ci left: 8.523097e-01	ci right 8.535143e-01	k: 1134374	n:1330000
KS ci ratio: 1.753073e+00	ci left: 8.194482e-07	ci right 7.700425e-06	k: 4	n:1330000
TMEM90B   1330000 perm   820 sec   (1623 perm/sec)   p_kst 3.007519e-06   p_cons 8.529128e-01   p_joint 8.270677e-06

Joint ci ratio: 1.131601e+00	ci left: 4.097888e-06	ci right 1.468804e-05	k: 11	n:1340000
Cons ci ratio: 1.406272e-03	ci left: 8.523118e-01	ci right 8.535120e-01	k: 1142903	n:1340000
KS ci ratio: 1.753073e+00	ci left: 8.133329e-07	ci right 7.642959e-06	k: 4	n:1340000
TMEM90B   1340000 perm   830 sec   (1614 perm/sec)   p_kst 2.985075e-06   p_cons 8.529127e-01   p_joint 8.208955e-06

Joint ci ratio: 1.131601e+00	ci left: 4.067533e-06	ci right 1.457924e-05	k: 11	n:1350000
Cons ci ratio: 1.401051e-03	ci left: 8.523147e-01	ci right 8.535104e-01	k: 1151433	n:1350000
KS ci ratio: 1.753073e+00	ci left: 8.073083e-07	ci right 7.586344e-06	k: 4	n:1350000
TMEM90B   1350000 perm   841 sec   (1605 perm/sec)   p_kst 2.962963e-06   p_cons 8.529133e-01   p_joint 8.148148e-06

Joint ci ratio: 1.131601e+00	ci left: 4.037625e-06	ci right 1.447204e-05	k: 11	n:1360000
Cons ci ratio: 1.395878e-03	ci left: 8.523191e-01	ci right 8.535103e-01	k: 1159965	n:1360000
KS ci ratio: 1.753073e+00	ci left: 8.013722e-07	ci right 7.530563e-06	k: 4	n:1360000
TMEM90B   1360000 perm   852 sec   (1596 perm/sec)   p_kst 2.941176e-06   p_cons 8.529154e-01   p_joint 8.088235e-06

Joint ci ratio: 1.131601e+00	ci left: 4.008153e-06	ci right 1.436641e-05	k: 11	n:1370000
Cons ci ratio: 1.390613e-03	ci left: 8.523504e-01	ci right 8.535372e-01	k: 1168534	n:1370000
KS ci ratio: 1.753073e+00	ci left: 7.955227e-07	ci right 7.475595e-06	k: 4	n:1370000
TMEM90B   1370000 perm   863 sec   (1587 perm/sec)   p_kst 2.919708e-06   p_cons 8.529445e-01   p_joint 8.029197e-06

Joint ci ratio: 1.131601e+00	ci left: 3.979108e-06	ci right 1.426230e-05	k: 11	n:1380000
Cons ci ratio: 1.385528e-03	ci left: 8.523595e-01	ci right 8.535420e-01	k: 1177073	n:1380000
KS ci ratio: 1.753073e+00	ci left: 7.897581e-07	ci right 7.421424e-06	k: 4	n:1380000
TMEM90B   1380000 perm   874 sec   (1579 perm/sec)   p_kst 2.898551e-06   p_cons 8.529514e-01   p_joint 7.971014e-06

Joint ci ratio: 1.131601e+00	ci left: 3.950481e-06	ci right 1.415970e-05	k: 11	n:1390000
Cons ci ratio: 1.380525e-03	ci left: 8.523634e-01	ci right 8.535416e-01	k: 1185605	n:1390000
KS ci ratio: 1.753074e+00	ci left: 7.840763e-07	ci right 7.368033e-06	k: 4	n:1390000
TMEM90B   1390000 perm   885 sec   (1570 perm/sec)   p_kst 2.877698e-06   p_cons 8.529532e-01   p_joint 7.913669e-06

Joint ci ratio: 1.131601e+00	ci left: 3.922264e-06	ci right 1.405856e-05	k: 11	n:1400000
Cons ci ratio: 1.375458e-03	ci left: 8.523887e-01	ci right 8.535627e-01	k: 1194167	n:1400000
KS ci ratio: 1.753074e+00	ci left: 7.784758e-07	ci right 7.315404e-06	k: 4	n:1400000
TMEM90B   1400000 perm   896 sec   (1562 perm/sec)   p_kst 2.857143e-06   p_cons 8.529764e-01   p_joint 7.857143e-06

Joint ci ratio: 1.131601e+00	ci left: 3.894446e-06	ci right 1.395885e-05	k: 11	n:1410000
Cons ci ratio: 1.370509e-03	ci left: 8.524024e-01	ci right 8.535721e-01	k: 1202713	n:1410000
KS ci ratio: 1.753074e+00	ci left: 7.729547e-07	ci right 7.263522e-06	k: 4	n:1410000
TMEM90B   1410000 perm   908 sec   (1553 perm/sec)   p_kst 2.836879e-06   p_cons 8.529879e-01   p_joint 7.801418e-06

Joint ci ratio: 1.131601e+00	ci left: 3.867020e-06	ci right 1.386055e-05	k: 11	n:1420000
Cons ci ratio: 1.365809e-03	ci left: 8.523798e-01	ci right 8.535455e-01	k: 1211208	n:1420000
KS ci ratio: 1.753074e+00	ci left: 7.675113e-07	ci right 7.212371e-06	k: 4	n:1420000
TMEM90B   1420000 perm   919 sec   (1545 perm/sec)   p_kst 2.816901e-06   p_cons 8.529634e-01   p_joint 7.746479e-06

Joint ci ratio: 1.131601e+00	ci left: 3.839978e-06	ci right 1.376362e-05	k: 11	n:1430000
Cons ci ratio: 1.361099e-03	ci left: 8.523681e-01	ci right 8.535297e-01	k: 1219718	n:1430000
KS ci ratio: 1.753074e+00	ci left: 7.621441e-07	ci right 7.161934e-06	k: 4	n:1430000
TMEM90B   1430000 perm   931 sec   (1536 perm/sec)   p_kst 2.797203e-06   p_cons 8.529497e-01   p_joint 7.692308e-06

Joint ci ratio: 1.131601e+00	ci left: 3.813312e-06	ci right 1.366804e-05	k: 11	n:1440000
Cons ci ratio: 1.356555e-03	ci left: 8.523350e-01	ci right 8.534927e-01	k: 1228197	n:1440000
KS ci ratio: 1.753074e+00	ci left: 7.568515e-07	ci right 7.112199e-06	k: 4	n:1440000
TMEM90B   1440000 perm   942 sec   (1528 perm/sec)   p_kst 2.777778e-06   p_cons 8.529146e-01   p_joint 7.638889e-06

Joint ci ratio: 1.131601e+00	ci left: 3.787013e-06	ci right 1.357378e-05	k: 11	n:1450000
Cons ci ratio: 1.351847e-03	ci left: 8.523411e-01	ci right 8.534948e-01	k: 1236732	n:1450000
KS ci ratio: 1.753074e+00	ci left: 7.516318e-07	ci right 7.063149e-06	k: 4	n:1450000
TMEM90B   1450000 perm   954 sec   (1520 perm/sec)   p_kst 2.758621e-06   p_cons 8.529186e-01   p_joint 7.586207e-06

Joint ci ratio: 1.131601e+00	ci left: 3.761075e-06	ci right 1.348081e-05	k: 11	n:1460000
Cons ci ratio: 1.347192e-03	ci left: 8.523464e-01	ci right 8.534961e-01	k: 1245266	n:1460000
KS ci ratio: 1.753074e+00	ci left: 7.464836e-07	ci right 7.014772e-06	k: 4	n:1460000
TMEM90B   1460000 perm   966 sec   (1512 perm/sec)   p_kst 2.739726e-06   p_cons 8.529219e-01   p_joint 7.534247e-06

Joint ci ratio: 1.087207e+00	ci left: 4.218085e-06	ci right 1.425954e-05	k: 12	n:1470000
Cons ci ratio: 1.342599e-03	ci left: 8.523489e-01	ci right 8.534946e-01	k: 1253796	n:1470000
KS ci ratio: 1.753074e+00	ci left: 7.414055e-07	ci right 6.967052e-06	k: 4	n:1470000
TMEM90B   1470000 perm   978 sec   (1504 perm/sec)   p_kst 2.721088e-06   p_cons 8.529224e-01   p_joint 8.163265e-06

Joint ci ratio: 1.087207e+00	ci left: 4.189585e-06	ci right 1.416319e-05	k: 12	n:1480000
Cons ci ratio: 1.338020e-03	ci left: 8.523574e-01	ci right 8.534993e-01	k: 1262335	n:1480000
KS ci ratio: 1.753074e+00	ci left: 7.363960e-07	ci right 6.919978e-06	k: 4	n:1480000
TMEM90B   1480000 perm   989 sec   (1496 perm/sec)   p_kst 2.702703e-06   p_cons 8.529291e-01   p_joint 8.108108e-06

Joint ci ratio: 1.087207e+00	ci left: 4.161467e-06	ci right 1.406814e-05	k: 12	n:1490000
Cons ci ratio: 1.333495e-03	ci left: 8.523645e-01	ci right 8.535026e-01	k: 1270872	n:1490000
KS ci ratio: 1.753074e+00	ci left: 7.314537e-07	ci right 6.873535e-06	k: 4	n:1490000
TMEM90B   1490000 perm   1001 sec   (1488 perm/sec)   p_kst 2.684564e-06   p_cons 8.529342e-01   p_joint 8.053691e-06

Joint ci ratio: 1.087207e+00	ci left: 4.133723e-06	ci right 1.397435e-05	k: 12	n:1500000
Cons ci ratio: 1.329015e-03	ci left: 8.523715e-01	ci right 8.535058e-01	k: 1279409	n:1500000
KS ci ratio: 1.753074e+00	ci left: 7.265774e-07	ci right 6.827712e-06	k: 4	n:1500000
TMEM90B   1500000 perm   1013 sec   (1480 perm/sec)   p_kst 2.666667e-06   p_cons 8.529393e-01   p_joint 8.000000e-06

Joint ci ratio: 1.087207e+00	ci left: 4.106348e-06	ci right 1.388180e-05	k: 12	n:1510000
Cons ci ratio: 1.324514e-03	ci left: 8.523911e-01	ci right 8.535215e-01	k: 1287965	n:1510000
KS ci ratio: 1.753074e+00	ci left: 7.217656e-07	ci right 6.782495e-06	k: 4	n:1510000
TMEM90B   1510000 perm   1025 sec   (1473 perm/sec)   p_kst 2.649007e-06   p_cons 8.529570e-01   p_joint 7.947020e-06

Joint ci ratio: 1.087207e+00	ci left: 4.079332e-06	ci right 1.379048e-05	k: 12	n:1520000
Cons ci ratio: 1.320318e-03	ci left: 8.523609e-01	ci right 8.534877e-01	k: 1296446	n:1520000
KS ci ratio: 1.753074e+00	ci left: 7.170171e-07	ci right 6.737873e-06	k: 4	n:1520000
TMEM90B   1520000 perm   1038 sec   (1465 perm/sec)   p_kst 2.631579e-06   p_cons 8.529250e-01   p_joint 7.894737e-06

Joint ci ratio: 1.087207e+00	ci left: 4.052670e-06	ci right 1.370034e-05	k: 12	n:1530000
Cons ci ratio: 1.315747e-03	ci left: 8.524104e-01	ci right 8.535333e-01	k: 1305048	n:1530000
KS ci ratio: 1.753074e+00	ci left: 7.123308e-07	ci right 6.693835e-06	k: 4	n:1530000
TMEM90B   1530000 perm   1050 sec   (1457 perm/sec)   p_kst 2.614379e-06   p_cons 8.529725e-01   p_joint 7.843137e-06

Joint ci ratio: 1.087207e+00	ci left: 4.026354e-06	ci right 1.361138e-05	k: 12	n:1540000
Cons ci ratio: 1.311447e-03	ci left: 8.524163e-01	ci right 8.535356e-01	k: 1313584	n:1540000
KS ci ratio: 1.753074e+00	ci left: 7.077052e-07	ci right 6.650369e-06	k: 4	n:1540000
TMEM90B   1540000 perm   1062 sec   (1450 perm/sec)   p_kst 2.597403e-06   p_cons 8.529766e-01   p_joint 7.792208e-06

Joint ci ratio: 1.087207e+00	ci left: 4.000377e-06	ci right 1.352356e-05	k: 12	n:1550000
Cons ci ratio: 1.307101e-03	ci left: 8.524390e-01	ci right 8.535545e-01	k: 1322146	n:1550000
KS ci ratio: 1.753074e+00	ci left: 7.031394e-07	ci right 6.607463e-06	k: 4	n:1550000
TMEM90B   1550000 perm   1074 sec   (1443 perm/sec)   p_kst 2.580645e-06   p_cons 8.529974e-01   p_joint 7.741935e-06

Joint ci ratio: 1.087208e+00	ci left: 3.974734e-06	ci right 1.343687e-05	k: 12	n:1560000
Cons ci ratio: 1.302868e-03	ci left: 8.524478e-01	ci right 8.535598e-01	k: 1330687	n:1560000
KS ci ratio: 1.753074e+00	ci left: 6.986321e-07	ci right 6.565108e-06	k: 4	n:1560000
TMEM90B   1560000 perm   1087 sec   (1435 perm/sec)   p_kst 2.564103e-06   p_cons 8.530045e-01   p_joint 7.692308e-06

Joint ci ratio: 1.087208e+00	ci left: 3.949417e-06	ci right 1.335129e-05	k: 12	n:1570000
Cons ci ratio: 1.298584e-03	ci left: 8.524745e-01	ci right 8.535828e-01	k: 1339256	n:1570000
KS ci ratio: 1.753074e+00	ci left: 6.941822e-07	ci right 6.523292e-06	k: 4	n:1570000
TMEM90B   1570000 perm   1099 sec   (1428 perm/sec)   p_kst 2.547771e-06   p_cons 8.530293e-01   p_joint 7.643312e-06

Joint ci ratio: 1.087208e+00	ci left: 3.924421e-06	ci right 1.326679e-05	k: 12	n:1580000
Cons ci ratio: 1.294511e-03	ci left: 8.524678e-01	ci right 8.535727e-01	k: 1347773	n:1580000
KS ci ratio: 1.753074e+00	ci left: 6.897886e-07	ci right 6.482005e-06	k: 4	n:1580000
TMEM90B   1580000 perm   1112 sec   (1421 perm/sec)   p_kst 2.531646e-06   p_cons 8.530209e-01   p_joint 7.594937e-06

Joint ci ratio: 1.047659e+00	ci left: 4.353436e-06	ci right 1.398134e-05	k: 13	n:1590000
Cons ci ratio: 1.290500e-03	ci left: 8.524568e-01	ci right 8.535582e-01	k: 1356283	n:1590000
KS ci ratio: 1.753074e+00	ci left: 6.854503e-07	ci right 6.441238e-06	k: 4	n:1590000
TMEM90B   1590000 perm   1125 sec   (1414 perm/sec)   p_kst 2.515723e-06   p_cons 8.530082e-01   p_joint 8.176101e-06

Joint ci ratio: 1.047659e+00	ci left: 4.326227e-06	ci right 1.389396e-05	k: 13	n:1600000
Cons ci ratio: 1.286435e-03	ci left: 8.524635e-01	ci right 8.535615e-01	k: 1364821	n:1600000
KS ci ratio: 1.753074e+00	ci left: 6.811663e-07	ci right 6.400980e-06	k: 4	n:1600000
TMEM90B   1600000 perm   1137 sec   (1407 perm/sec)   p_kst 2.500000e-06   p_cons 8.530131e-01   p_joint 8.125000e-06

Joint ci ratio: 1.047659e+00	ci left: 4.299356e-06	ci right 1.380766e-05	k: 13	n:1610000
Cons ci ratio: 1.282390e-03	ci left: 8.524739e-01	ci right 8.535684e-01	k: 1373365	n:1610000
KS ci ratio: 1.753074e+00	ci left: 6.769354e-07	ci right 6.361223e-06	k: 4	n:1610000
TMEM90B   1610000 perm   1150 sec   (1400 perm/sec)   p_kst 2.484472e-06   p_cons 8.530217e-01   p_joint 8.074534e-06

Joint ci ratio: 1.047659e+00	ci left: 4.272817e-06	ci right 1.372243e-05	k: 13	n:1620000
Cons ci ratio: 1.278417e-03	ci left: 8.524773e-01	ci right 8.535684e-01	k: 1381898	n:1620000
KS ci ratio: 1.753074e+00	ci left: 6.727568e-07	ci right 6.321956e-06	k: 4	n:1620000
TMEM90B   1620000 perm   1163 sec   (1393 perm/sec)   p_kst 2.469136e-06   p_cons 8.530235e-01   p_joint 8.024691e-06

Joint ci ratio: 1.047659e+00	ci left: 4.246603e-06	ci right 1.363824e-05	k: 13	n:1630000
Cons ci ratio: 1.274390e-03	ci left: 8.524985e-01	ci right 8.535862e-01	k: 1390460	n:1630000
KS ci ratio: 1.753074e+00	ci left: 6.686295e-07	ci right 6.283171e-06	k: 4	n:1630000
TMEM90B   1630000 perm   1176 sec   (1386 perm/sec)   p_kst 2.453988e-06   p_cons 8.530429e-01   p_joint 7.975460e-06

Joint ci ratio: 1.047659e+00	ci left: 4.220709e-06	ci right 1.355508e-05	k: 13	n:1640000
Cons ci ratio: 1.270370e-03	ci left: 8.525255e-01	ci right 8.536098e-01	k: 1399032	n:1640000
KS ci ratio: 1.753074e+00	ci left: 6.645524e-07	ci right 6.244859e-06	k: 4	n:1640000
TMEM90B   1640000 perm   1189 sec   (1379 perm/sec)   p_kst 2.439024e-06   p_cons 8.530683e-01   p_joint 7.926829e-06

Joint ci ratio: 1.047659e+00	ci left: 4.195129e-06	ci right 1.347293e-05	k: 13	n:1650000
Cons ci ratio: 1.266624e-03	ci left: 8.525055e-01	ci right 8.535866e-01	k: 1407527	n:1650000
KS ci ratio: 1.753074e+00	ci left: 6.605249e-07	ci right 6.207012e-06	k: 4	n:1650000
TMEM90B   1650000 perm   1202 sec   (1373 perm/sec)   p_kst 2.424242e-06   p_cons 8.530467e-01   p_joint 7.878788e-06

Joint ci ratio: 1.047659e+00	ci left: 4.169857e-06	ci right 1.339177e-05	k: 13	n:1660000
Cons ci ratio: 1.262865e-03	ci left: 8.524948e-01	ci right 8.535726e-01	k: 1416037	n:1660000
KS ci ratio: 1.753074e+00	ci left: 6.565458e-07	ci right 6.169620e-06	k: 4	n:1660000
TMEM90B   1660000 perm   1215 sec   (1366 perm/sec)   p_kst 2.409639e-06   p_cons 8.530343e-01   p_joint 7.831325e-06

Joint ci ratio: 1.047659e+00	ci left: 4.144888e-06	ci right 1.331158e-05	k: 13	n:1670000
Cons ci ratio: 1.259143e-03	ci left: 8.524836e-01	ci right 8.535583e-01	k: 1424546	n:1670000
KS ci ratio: 1.753074e+00	ci left: 6.526144e-07	ci right 6.132676e-06	k: 4	n:1670000
TMEM90B   1670000 perm   1228 sec   (1360 perm/sec)   p_kst 2.395210e-06   p_cons 8.530216e-01   p_joint 7.784431e-06

Joint ci ratio: 1.385926e+00	ci left: 1.675218e-06	ci right 8.584907e-06	k: 7	n:1680000
Cons ci ratio: 1.255510e-03	ci left: 8.524612e-01	ci right 8.535328e-01	k: 1433036	n:1680000
KS ci ratio: 1.753074e+00	ci left: 6.487298e-07	ci right 6.096172e-06	k: 4	n:1680000
TMEM90B   1680000 perm   1241 sec   (1353 perm/sec)   p_kst 2.380952e-06   p_cons 8.529976e-01   p_joint 4.166667e-06

Joint ci ratio: 1.385926e+00	ci left: 1.665305e-06	ci right 8.534109e-06	k: 7	n:1690000
Cons ci ratio: 1.251816e-03	ci left: 8.524575e-01	ci right 8.535259e-01	k: 1441557	n:1690000
KS ci ratio: 1.753074e+00	ci left: 6.448911e-07	ci right 6.060100e-06	k: 4	n:1690000
TMEM90B   1690000 perm   1255 sec   (1347 perm/sec)   p_kst 2.366864e-06   p_cons 8.529923e-01   p_joint 4.142012e-06

Joint ci ratio: 1.385926e+00	ci left: 1.655509e-06	ci right 8.483908e-06	k: 7	n:1700000
Cons ci ratio: 1.248334e-03	ci left: 8.524179e-01	ci right 8.534832e-01	k: 1450017	n:1700000
KS ci ratio: 1.753074e+00	ci left: 6.410976e-07	ci right 6.024453e-06	k: 4	n:1700000
TMEM90B   1700000 perm   1268 sec   (1341 perm/sec)   p_kst 2.352941e-06   p_cons 8.529512e-01   p_joint 4.117647e-06

Joint ci ratio: 1.385926e+00	ci left: 1.645828e-06	ci right 8.434295e-06	k: 7	n:1710000
Cons ci ratio: 1.244601e-03	ci left: 8.524350e-01	ci right 8.534972e-01	k: 1458573	n:1710000
KS ci ratio: 1.753074e+00	ci left: 6.373485e-07	ci right 5.989222e-06	k: 4	n:1710000
TMEM90B   1710000 perm   1281 sec   (1335 perm/sec)   p_kst 2.339181e-06   p_cons 8.529667e-01   p_joint 4.093567e-06

Joint ci ratio: 1.385926e+00	ci left: 1.636259e-06	ci right 8.385258e-06	k: 7	n:1720000
Cons ci ratio: 1.240911e-03	ci left: 8.524501e-01	ci right 8.535092e-01	k: 1467126	n:1720000
KS ci ratio: 1.753074e+00	ci left: 6.336430e-07	ci right 5.954401e-06	k: 4	n:1720000
TMEM90B   1720000 perm   1294 sec   (1329 perm/sec)   p_kst 2.325581e-06   p_cons 8.529802e-01   p_joint 4.069767e-06

Joint ci ratio: 1.385926e+00	ci left: 1.626801e-06	ci right 8.336789e-06	k: 7	n:1730000
Cons ci ratio: 1.237444e-03	ci left: 8.524263e-01	ci right 8.534823e-01	k: 1475612	n:1730000
KS ci ratio: 1.753074e+00	ci left: 6.299803e-07	ci right 5.919983e-06	k: 4	n:1730000
TMEM90B   1730000 perm   1308 sec   (1323 perm/sec)   p_kst 2.312139e-06   p_cons 8.529549e-01   p_joint 4.046243e-06

Joint ci ratio: 1.385926e+00	ci left: 1.617452e-06	ci right 8.288876e-06	k: 7	n:1740000
Cons ci ratio: 1.233887e-03	ci left: 8.524269e-01	ci right 8.534799e-01	k: 1484140	n:1740000
KS ci ratio: 1.753074e+00	ci left: 6.263598e-07	ci right 5.885960e-06	k: 4	n:1740000
TMEM90B   1740000 perm   1321 sec   (1317 perm/sec)   p_kst 2.298851e-06   p_cons 8.529540e-01   p_joint 4.022989e-06

Joint ci ratio: 1.385926e+00	ci left: 1.608209e-06	ci right 8.241511e-06	k: 7	n:1750000
Cons ci ratio: 1.230258e-03	ci left: 8.524487e-01	ci right 8.534987e-01	k: 1492705	n:1750000
KS ci ratio: 1.753074e+00	ci left: 6.227806e-07	ci right 5.852326e-06	k: 4	n:1750000
TMEM90B   1750000 perm   1335 sec   (1311 perm/sec)   p_kst 2.285714e-06   p_cons 8.529743e-01   p_joint 4.000000e-06

Joint ci ratio: 1.385926e+00	ci left: 1.599071e-06	ci right 8.194685e-06	k: 7	n:1760000
Cons ci ratio: 1.226840e-03	ci left: 8.524333e-01	ci right 8.534803e-01	k: 1501205	n:1760000
KS ci ratio: 1.753074e+00	ci left: 6.192420e-07	ci right 5.819074e-06	k: 4	n:1760000
TMEM90B   1760000 perm   1349 sec   (1305 perm/sec)   p_kst 2.272727e-06   p_cons 8.529574e-01   p_joint 3.977273e-06

Joint ci ratio: 1.385926e+00	ci left: 1.590037e-06	ci right 8.148387e-06	k: 7	n:1770000
Cons ci ratio: 1.223443e-03	ci left: 8.524198e-01	ci right 8.534638e-01	k: 1509708	n:1770000
KS ci ratio: 1.753074e+00	ci left: 6.157435e-07	ci right 5.786198e-06	k: 4	n:1770000
TMEM90B   1770000 perm   1363 sec   (1299 perm/sec)   p_kst 2.259887e-06   p_cons 8.529424e-01   p_joint 3.954802e-06

Joint ci ratio: 1.385926e+00	ci left: 1.581104e-06	ci right 8.102610e-06	k: 7	n:1780000
Cons ci ratio: 1.219869e-03	ci left: 8.524486e-01	ci right 8.534896e-01	k: 1518286	n:1780000
KS ci ratio: 1.753074e+00	ci left: 6.122842e-07	ci right 5.753691e-06	k: 4	n:1780000
TMEM90B   1780000 perm   1377 sec   (1293 perm/sec)   p_kst 2.247191e-06   p_cons 8.529697e-01   p_joint 3.932584e-06

Joint ci ratio: 1.385926e+00	ci left: 1.572271e-06	ci right 8.057344e-06	k: 7	n:1790000
Cons ci ratio: 1.216572e-03	ci left: 8.524261e-01	ci right 8.534643e-01	k: 1526773	n:1790000
KS ci ratio: 1.753074e+00	ci left: 6.088637e-07	ci right 5.721548e-06	k: 4	n:1790000
TMEM90B   1790000 perm   1391 sec   (1287 perm/sec)   p_kst 2.234637e-06   p_cons 8.529458e-01   p_joint 3.910615e-06

Joint ci ratio: 1.385926e+00	ci left: 1.563536e-06	ci right 8.012581e-06	k: 7	n:1800000
Cons ci ratio: 1.213181e-03	ci left: 8.524290e-01	ci right 8.534643e-01	k: 1535305	n:1800000
KS ci ratio: 1.753074e+00	ci left: 6.054811e-07	ci right 5.689762e-06	k: 4	n:1800000
TMEM90B   1800000 perm   1404 sec   (1282 perm/sec)   p_kst 2.222222e-06   p_cons 8.529472e-01   p_joint 3.888889e-06

Joint ci ratio: 1.385926e+00	ci left: 1.554898e-06	ci right 7.968313e-06	k: 7	n:1810000
Cons ci ratio: 1.209818e-03	ci left: 8.524318e-01	ci right 8.534643e-01	k: 1543837	n:1810000
KS ci ratio: 1.753074e+00	ci left: 6.021359e-07	ci right 5.658327e-06	k: 4	n:1810000
TMEM90B   1810000 perm   1418 sec   (1276 perm/sec)   p_kst 2.209945e-06   p_cons 8.529486e-01   p_joint 3.867403e-06

Joint ci ratio: 1.385926e+00	ci left: 1.546355e-06	ci right 7.924531e-06	k: 7	n:1820000
Cons ci ratio: 1.206632e-03	ci left: 8.524038e-01	ci right 8.534335e-01	k: 1552313	n:1820000
KS ci ratio: 1.753074e+00	ci left: 5.988274e-07	ci right 5.627237e-06	k: 4	n:1820000
TMEM90B   1820000 perm   1433 sec   (1270 perm/sec)   p_kst 2.197802e-06   p_cons 8.529192e-01   p_joint 3.846154e-06

Joint ci ratio: 1.385926e+00	ci left: 1.537905e-06	ci right 7.881227e-06	k: 7	n:1830000
Cons ci ratio: 1.203333e-03	ci left: 8.524046e-01	ci right 8.534315e-01	k: 1560841	n:1830000
KS ci ratio: 1.753074e+00	ci left: 5.955552e-07	ci right 5.596487e-06	k: 4	n:1830000
TMEM90B   1830000 perm   1447 sec   (1265 perm/sec)   p_kst 2.185792e-06   p_cons 8.529186e-01   p_joint 3.825137e-06

Joint ci ratio: 1.385926e+00	ci left: 1.529546e-06	ci right 7.838395e-06	k: 7	n:1840000
Cons ci ratio: 1.200052e-03	ci left: 8.524075e-01	ci right 8.534316e-01	k: 1569373	n:1840000
KS ci ratio: 1.753074e+00	ci left: 5.923184e-07	ci right 5.566071e-06	k: 4	n:1840000
TMEM90B   1840000 perm   1462 sec   (1259 perm/sec)   p_kst 2.173913e-06   p_cons 8.529201e-01   p_joint 3.804348e-06

Joint ci ratio: 1.753074e+00	ci left: 5.891167e-07	ci right 5.535985e-06	k: 4	n:1850000
Cons ci ratio: 1.196634e-03	ci left: 8.524445e-01	ci right 8.534657e-01	k: 1577968	n:1850000
KS ci ratio: 1.753074e+00	ci left: 5.891167e-07	ci right 5.535985e-06	k: 4	n:1850000
TMEM90B   1850000 perm   1476 sec   (1253 perm/sec)   p_kst 2.162162e-06   p_cons 8.529557e-01   p_joint 2.162162e-06

Joint ci ratio: 1.753074e+00	ci left: 5.859494e-07	ci right 5.506221e-06	k: 4	n:1860000
Cons ci ratio: 1.193501e-03	ci left: 8.524273e-01	ci right 8.534458e-01	k: 1586463	n:1860000
KS ci ratio: 1.753074e+00	ci left: 5.859494e-07	ci right 5.506221e-06	k: 4	n:1860000
TMEM90B   1860000 perm   1490 sec   (1248 perm/sec)   p_kst 2.150538e-06   p_cons 8.529371e-01   p_joint 2.150538e-06

Joint ci ratio: 1.753074e+00	ci left: 5.828160e-07	ci right 5.476776e-06	k: 4	n:1870000
Cons ci ratio: 1.190322e-03	ci left: 8.524253e-01	ci right 8.534410e-01	k: 1594986	n:1870000
KS ci ratio: 1.753074e+00	ci left: 5.828160e-07	ci right 5.476776e-06	k: 4	n:1870000
TMEM90B   1870000 perm   1505 sec   (1243 perm/sec)   p_kst 2.139037e-06   p_cons 8.529337e-01   p_joint 2.139037e-06

Joint ci ratio: 1.753074e+00	ci left: 5.797159e-07	ci right 5.447645e-06	k: 4	n:1880000
Cons ci ratio: 1.187148e-03	ci left: 8.524275e-01	ci right 8.534406e-01	k: 1603517	n:1880000
KS ci ratio: 1.753074e+00	ci left: 5.797159e-07	ci right 5.447645e-06	k: 4	n:1880000
TMEM90B   1880000 perm   1520 sec   (1237 perm/sec)   p_kst 2.127660e-06   p_cons 8.529346e-01   p_joint 2.127660e-06

Joint ci ratio: 1.753075e+00	ci left: 5.766486e-07	ci right 5.418821e-06	k: 4	n:1890000
Cons ci ratio: 1.183927e-03	ci left: 8.524451e-01	ci right 8.534554e-01	k: 1612077	n:1890000
KS ci ratio: 1.753075e+00	ci left: 5.766486e-07	ci right 5.418821e-06	k: 4	n:1890000
TMEM90B   1890000 perm   1534 sec   (1232 perm/sec)   p_kst 2.116402e-06   p_cons 8.529508e-01   p_joint 2.116402e-06

Joint ci ratio: 1.753075e+00	ci left: 5.736136e-07	ci right 5.390301e-06	k: 4	n:1900000
Cons ci ratio: 1.180855e-03	ci left: 8.524361e-01	ci right 8.534438e-01	k: 1620587	n:1900000
KS ci ratio: 1.753075e+00	ci left: 5.736136e-07	ci right 5.390301e-06	k: 4	n:1900000
TMEM90B   1900000 perm   1549 sec   (1226 perm/sec)   p_kst 2.105263e-06   p_cons 8.529405e-01   p_joint 2.105263e-06

Joint ci ratio: 1.753075e+00	ci left: 5.706104e-07	ci right 5.362080e-06	k: 4	n:1910000
Cons ci ratio: 1.177805e-03	ci left: 8.524278e-01	ci right 8.534329e-01	k: 1629098	n:1910000
KS ci ratio: 1.753075e+00	ci left: 5.706104e-07	ci right 5.362080e-06	k: 4	n:1910000
TMEM90B   1910000 perm   1564 sec   (1221 perm/sec)   p_kst 2.094241e-06   p_cons 8.529309e-01   p_joint 2.094241e-06

Joint ci ratio: 1.753075e+00	ci left: 5.676385e-07	ci right 5.334152e-06	k: 4	n:1920000
Cons ci ratio: 1.174837e-03	ci left: 8.524071e-01	ci right 8.534096e-01	k: 1637585	n:1920000
KS ci ratio: 1.753075e+00	ci left: 5.676385e-07	ci right 5.334152e-06	k: 4	n:1920000
TMEM90B   1920000 perm   1579 sec   (1216 perm/sec)   p_kst 2.083333e-06   p_cons 8.529089e-01   p_joint 2.083333e-06

Joint ci ratio: 1.753075e+00	ci left: 5.646974e-07	ci right 5.306514e-06	k: 4	n:1930000
Cons ci ratio: 1.171601e-03	ci left: 8.524488e-01	ci right 8.534486e-01	k: 1646192	n:1930000
KS ci ratio: 1.753075e+00	ci left: 5.646974e-07	ci right 5.306514e-06	k: 4	n:1930000
TMEM90B   1930000 perm   1594 sec   (1211 perm/sec)   p_kst 2.072539e-06   p_cons 8.529492e-01   p_joint 2.072539e-06

Joint ci ratio: 1.753075e+00	ci left: 5.617866e-07	ci right 5.279161e-06	k: 4	n:1940000
Cons ci ratio: 1.168490e-03	ci left: 8.524689e-01	ci right 8.534661e-01	k: 1654758	n:1940000
KS ci ratio: 1.753075e+00	ci left: 5.617866e-07	ci right 5.279161e-06	k: 4	n:1940000
TMEM90B   1940000 perm   1609 sec   (1205 perm/sec)   p_kst 2.061856e-06   p_cons 8.529680e-01   p_joint 2.061856e-06

Joint ci ratio: 1.753075e+00	ci left: 5.589056e-07	ci right 5.252088e-06	k: 4	n:1950000
Cons ci ratio: 1.165596e-03	ci left: 8.524473e-01	ci right 8.534419e-01	k: 1663243	n:1950000
KS ci ratio: 1.753075e+00	ci left: 5.589056e-07	ci right 5.252088e-06	k: 4	n:1950000
TMEM90B   1950000 perm   1624 sec   (1201 perm/sec)   p_kst 2.051282e-06   p_cons 8.529451e-01   p_joint 2.051282e-06

Joint ci ratio: 1.753075e+00	ci left: 5.560540e-07	ci right 5.225292e-06	k: 4	n:1960000
Cons ci ratio: 1.162729e-03	ci left: 8.524248e-01	ci right 8.534170e-01	k: 1671726	n:1960000
KS ci ratio: 1.753075e+00	ci left: 5.560540e-07	ci right 5.225292e-06	k: 4	n:1960000
TMEM90B   1960000 perm   1639 sec   (1196 perm/sec)   p_kst 2.040816e-06   p_cons 8.529214e-01   p_joint 2.040816e-06

Joint ci ratio: 1.753075e+00	ci left: 5.532314e-07	ci right 5.198768e-06	k: 4	n:1970000
Cons ci ratio: 1.159693e-03	ci left: 8.524437e-01	ci right 8.534334e-01	k: 1680290	n:1970000
KS ci ratio: 1.753075e+00	ci left: 5.532314e-07	ci right 5.198768e-06	k: 4	n:1970000
TMEM90B   1970000 perm   1655 sec   (1191 perm/sec)   p_kst 2.030457e-06   p_cons 8.529391e-01   p_joint 2.030457e-06

Joint ci ratio: 1.753075e+00	ci left: 5.504373e-07	ci right 5.172511e-06	k: 4	n:1980000
Cons ci ratio: 1.156782e-03	ci left: 8.524403e-01	ci right 8.534274e-01	k: 1688810	n:1980000
KS ci ratio: 1.753075e+00	ci left: 5.504373e-07	ci right 5.172511e-06	k: 4	n:1980000
TMEM90B   1980000 perm   1670 sec   (1186 perm/sec)   p_kst 2.020202e-06   p_cons 8.529343e-01   p_joint 2.020202e-06

Joint ci ratio: 1.753075e+00	ci left: 5.476713e-07	ci right 5.146519e-06	k: 4	n:1990000
Cons ci ratio: 1.153757e-03	ci left: 8.524665e-01	ci right 8.534511e-01	k: 1697389	n:1990000
KS ci ratio: 1.753075e+00	ci left: 5.476713e-07	ci right 5.146519e-06	k: 4	n:1990000
TMEM90B   1990000 perm   1685 sec   (1181 perm/sec)   p_kst 2.010050e-06   p_cons 8.529593e-01   p_joint 2.010050e-06

Joint ci ratio: 1.753075e+00	ci left: 5.449329e-07	ci right 5.120786e-06	k: 4	n:2000000
Cons ci ratio: 1.150859e-03	ci left: 8.524699e-01	ci right 8.534520e-01	k: 1705923	n:2000000
KS ci ratio: 1.753075e+00	ci left: 5.449329e-07	ci right 5.120786e-06	k: 4	n:2000000
TMEM90B   2000000 perm   1700 sec   (1176 perm/sec)   p_kst 2.000000e-06   p_cons 8.529615e-01   p_joint 2.000000e-06

Joint ci ratio: 1.753075e+00	ci left: 5.422218e-07	ci right 5.095310e-06	k: 4	n:2010000
Cons ci ratio: 1.148172e-03	ci left: 8.524320e-01	ci right 8.534118e-01	k: 1714374	n:2010000
KS ci ratio: 1.753075e+00	ci left: 5.422218e-07	ci right 5.095310e-06	k: 4	n:2010000
TMEM90B   2010000 perm   1716 sec   (1172 perm/sec)   p_kst 1.990050e-06   p_cons 8.529224e-01   p_joint 1.990050e-06

Joint ci ratio: 1.753075e+00	ci left: 5.395376e-07	ci right 5.070086e-06	k: 4	n:2020000
Cons ci ratio: 1.145442e-03	ci left: 8.524078e-01	ci right 8.533852e-01	k: 1722852	n:2020000
KS ci ratio: 1.753075e+00	ci left: 5.395376e-07	ci right 5.070086e-06	k: 4	n:2020000
TMEM90B   2020000 perm   1731 sec   (1167 perm/sec)   p_kst 1.980198e-06   p_cons 8.528970e-01   p_joint 1.980198e-06

Joint ci ratio: 1.753075e+00	ci left: 5.368797e-07	ci right 5.045110e-06	k: 4	n:2030000
Cons ci ratio: 1.142566e-03	ci left: 8.524204e-01	ci right 8.533954e-01	k: 1731404	n:2030000
KS ci ratio: 1.753075e+00	ci left: 5.368797e-07	ci right 5.045110e-06	k: 4	n:2030000
TMEM90B   2030000 perm   1747 sec   (1162 perm/sec)   p_kst 1.970443e-06   p_cons 8.529084e-01   p_joint 1.970443e-06

Joint ci ratio: 1.753075e+00	ci left: 5.342480e-07	ci right 5.020379e-06	k: 4	n:2040000
Cons ci ratio: 1.139744e-03	ci left: 8.524255e-01	ci right 8.533980e-01	k: 1739941	n:2040000
KS ci ratio: 1.753075e+00	ci left: 5.342480e-07	ci right 5.020379e-06	k: 4	n:2040000
TMEM90B   2040000 perm   1762 sec   (1158 perm/sec)   p_kst 1.960784e-06   p_cons 8.529123e-01   p_joint 1.960784e-06

Joint ci ratio: 1.753075e+00	ci left: 5.316419e-07	ci right 4.995889e-06	k: 4	n:2050000
Cons ci ratio: 1.136954e-03	ci left: 8.524281e-01	ci right 8.533983e-01	k: 1748473	n:2050000
KS ci ratio: 1.753075e+00	ci left: 5.316419e-07	ci right 4.995889e-06	k: 4	n:2050000
TMEM90B   2050000 perm   1778 sec   (1153 perm/sec)   p_kst 1.951220e-06   p_cons 8.529137e-01   p_joint 1.951220e-06

Joint ci ratio: 1.753075e+00	ci left: 5.290611e-07	ci right 4.971637e-06	k: 4	n:2060000
Cons ci ratio: 1.134117e-03	ci left: 8.524457e-01	ci right 8.534135e-01	k: 1757036	n:2060000
KS ci ratio: 1.753075e+00	ci left: 5.290611e-07	ci right 4.971637e-06	k: 4	n:2060000
TMEM90B   2060000 perm   1794 sec   (1148 perm/sec)   p_kst 1.941748e-06   p_cons 8.529301e-01   p_joint 1.941748e-06

Joint ci ratio: 1.753075e+00	ci left: 5.265053e-07	ci right 4.947620e-06	k: 4	n:2070000
Cons ci ratio: 1.131323e-03	ci left: 8.524583e-01	ci right 8.534238e-01	k: 1765589	n:2070000
KS ci ratio: 1.753075e+00	ci left: 5.265053e-07	ci right 4.947620e-06	k: 4	n:2070000
TMEM90B   2070000 perm   1810 sec   (1144 perm/sec)   p_kst 1.932367e-06   p_cons 8.529415e-01   p_joint 1.932367e-06

Joint ci ratio: 1.753075e+00	ci left: 5.239740e-07	ci right 4.923833e-06	k: 4	n:2080000
Cons ci ratio: 1.128603e-03	ci left: 8.524588e-01	ci right 8.534219e-01	k: 1774117	n:2080000
KS ci ratio: 1.753075e+00	ci left: 5.239740e-07	ci right 4.923833e-06	k: 4	n:2080000
TMEM90B   2080000 perm   1826 sec   (1139 perm/sec)   p_kst 1.923077e-06   p_cons 8.529409e-01   p_joint 1.923077e-06

Joint ci ratio: 1.753075e+00	ci left: 5.214669e-07	ci right 4.900274e-06	k: 4	n:2090000
Cons ci ratio: 1.126002e-03	ci left: 8.524373e-01	ci right 8.533981e-01	k: 1782599	n:2090000
KS ci ratio: 1.753075e+00	ci left: 5.214669e-07	ci right 4.900274e-06	k: 4	n:2090000
TMEM90B   2090000 perm   1842 sec   (1135 perm/sec)   p_kst 1.913876e-06   p_cons 8.529182e-01   p_joint 1.913876e-06

Joint ci ratio: 1.753075e+00	ci left: 5.189837e-07	ci right 4.876940e-06	k: 4	n:2100000
Cons ci ratio: 1.123215e-03	ci left: 8.524612e-01	ci right 8.534197e-01	k: 1791176	n:2100000
KS ci ratio: 1.753075e+00	ci left: 5.189837e-07	ci right 4.876940e-06	k: 4	n:2100000
TMEM90B   2100000 perm   1858 sec   (1130 perm/sec)   p_kst 1.904762e-06   p_cons 8.529410e-01   p_joint 1.904762e-06

Joint ci ratio: 1.753075e+00	ci left: 5.165241e-07	ci right 4.853826e-06	k: 4	n:2110000
Cons ci ratio: 1.120501e-03	ci left: 8.524736e-01	ci right 8.534297e-01	k: 1799729	n:2110000
KS ci ratio: 1.753075e+00	ci left: 5.165241e-07	ci right 4.853826e-06	k: 4	n:2110000
TMEM90B   2110000 perm   1874 sec   (1126 perm/sec)   p_kst 1.895735e-06   p_cons 8.529521e-01   p_joint 1.895735e-06

Joint ci ratio: 1.753075e+00	ci left: 5.140877e-07	ci right 4.830931e-06	k: 4	n:2120000
Cons ci ratio: 1.117801e-03	ci left: 8.524867e-01	ci right 8.534406e-01	k: 1808284	n:2120000
KS ci ratio: 1.753075e+00	ci left: 5.140877e-07	ci right 4.830931e-06	k: 4	n:2120000
TMEM90B   2120000 perm   1890 sec   (1121 perm/sec)   p_kst 1.886792e-06   p_cons 8.529642e-01   p_joint 1.886792e-06

Joint ci ratio: 1.753075e+00	ci left: 5.116741e-07	ci right 4.808251e-06	k: 4	n:2130000
Cons ci ratio: 1.115211e-03	ci left: 8.524796e-01	ci right 8.534312e-01	k: 1816796	n:2130000
KS ci ratio: 1.753075e+00	ci left: 5.116741e-07	ci right 4.808251e-06	k: 4	n:2130000
TMEM90B   2130000 perm   1907 sec   (1117 perm/sec)   p_kst 1.877934e-06   p_cons 8.529559e-01   p_joint 1.877934e-06

Joint ci ratio: 1.753075e+00	ci left: 5.092831e-07	ci right 4.785782e-06	k: 4	n:2140000
Cons ci ratio: 1.112560e-03	ci left: 8.524902e-01	ci right 8.534397e-01	k: 1825346	n:2140000
KS ci ratio: 1.753075e+00	ci left: 5.092831e-07	ci right 4.785782e-06	k: 4	n:2140000
TMEM90B   2140000 perm   1923 sec   (1113 perm/sec)   p_kst 1.869159e-06   p_cons 8.529654e-01   p_joint 1.869159e-06

Joint ci ratio: 1.753075e+00	ci left: 5.069144e-07	ci right 4.763523e-06	k: 4	n:2150000
Cons ci ratio: 1.109903e-03	ci left: 8.525064e-01	ci right 8.534536e-01	k: 1833908	n:2150000
KS ci ratio: 1.753075e+00	ci left: 5.069144e-07	ci right 4.763523e-06	k: 4	n:2150000
TMEM90B   2150000 perm   1939 sec   (1109 perm/sec)   p_kst 1.860465e-06   p_cons 8.529805e-01   p_joint 1.860465e-06

Joint ci ratio: 1.753075e+00	ci left: 5.045675e-07	ci right 4.741469e-06	k: 4	n:2160000
Cons ci ratio: 1.107351e-03	ci left: 8.525030e-01	ci right 8.534479e-01	k: 1842428	n:2160000
KS ci ratio: 1.753075e+00	ci left: 5.045675e-07	ci right 4.741469e-06	k: 4	n:2160000
TMEM90B   2160000 perm   1956 sec   (1104 perm/sec)   p_kst 1.851852e-06   p_cons 8.529759e-01   p_joint 1.851852e-06

Joint ci ratio: 1.753075e+00	ci left: 5.022423e-07	ci right 4.719619e-06	k: 4	n:2170000
Cons ci ratio: 1.104814e-03	ci left: 8.525000e-01	ci right 8.534428e-01	k: 1850949	n:2170000
KS ci ratio: 1.753075e+00	ci left: 5.022423e-07	ci right 4.719619e-06	k: 4	n:2170000
TMEM90B   2170000 perm   1972 sec   (1100 perm/sec)   p_kst 1.843318e-06   p_cons 8.529719e-01   p_joint 1.843318e-06

Joint ci ratio: 1.753075e+00	ci left: 4.999385e-07	ci right 4.697970e-06	k: 4	n:2180000
Cons ci ratio: 1.102200e-03	ci left: 8.525187e-01	ci right 8.534593e-01	k: 1859517	n:2180000
KS ci ratio: 1.753075e+00	ci left: 4.999385e-07	ci right 4.697970e-06	k: 4	n:2180000
TMEM90B   2180000 perm   1989 sec   (1096 perm/sec)   p_kst 1.834862e-06   p_cons 8.529894e-01   p_joint 1.834862e-06

Joint ci ratio: 1.753075e+00	ci left: 4.976556e-07	ci right 4.676518e-06	k: 4	n:2190000
Cons ci ratio: 1.099631e-03	ci left: 8.525312e-01	ci right 8.534697e-01	k: 1868072	n:2190000
KS ci ratio: 1.753075e+00	ci left: 4.976556e-07	ci right 4.676518e-06	k: 4	n:2190000
TMEM90B   2190000 perm   2006 sec   (1092 perm/sec)   p_kst 1.826484e-06   p_cons 8.530009e-01   p_joint 1.826484e-06

Joint ci ratio: 1.753075e+00	ci left: 4.953936e-07	ci right 4.655261e-06	k: 4	n:2200000
Cons ci ratio: 1.097290e-03	ci left: 8.524954e-01	ci right 8.534318e-01	k: 1876521	n:2200000
KS ci ratio: 1.753075e+00	ci left: 4.953936e-07	ci right 4.655261e-06	k: 4	n:2200000
TMEM90B   2200000 perm   2022 sec   (1088 perm/sec)   p_kst 1.818182e-06   p_cons 8.529641e-01   p_joint 1.818182e-06

Joint ci ratio: 1.753075e+00	ci left: 4.931520e-07	ci right 4.634196e-06	k: 4	n:2210000
Cons ci ratio: 1.094847e-03	ci left: 8.524867e-01	ci right 8.534210e-01	k: 1885029	n:2210000
KS ci ratio: 1.753075e+00	ci left: 4.931520e-07	ci right 4.634196e-06	k: 4	n:2210000
TMEM90B   2210000 perm   2039 sec   (1084 perm/sec)   p_kst 1.809955e-06   p_cons 8.529543e-01   p_joint 1.809955e-06

Joint ci ratio: 1.753075e+00	ci left: 4.909306e-07	ci right 4.613322e-06	k: 4	n:2220000
Cons ci ratio: 1.092346e-03	ci left: 8.524952e-01	ci right 8.534273e-01	k: 1893575	n:2220000
KS ci ratio: 1.753075e+00	ci left: 4.909306e-07	ci right 4.613322e-06	k: 4	n:2220000
TMEM90B   2220000 perm   2056 sec   (1080 perm/sec)   p_kst 1.801802e-06   p_cons 8.529617e-01   p_joint 1.801802e-06

Joint ci ratio: 1.753075e+00	ci left: 4.887291e-07	ci right 4.592634e-06	k: 4	n:2230000
Cons ci ratio: 1.089905e-03	ci left: 8.524937e-01	ci right 8.534238e-01	k: 1902099	n:2230000
KS ci ratio: 1.753075e+00	ci left: 4.887291e-07	ci right 4.592634e-06	k: 4	n:2230000
TMEM90B   2230000 perm   2073 sec   (1076 perm/sec)   p_kst 1.793722e-06   p_cons 8.529592e-01   p_joint 1.793722e-06

Joint ci ratio: 1.753075e+00	ci left: 4.865472e-07	ci right 4.572131e-06	k: 4	n:2240000
Cons ci ratio: 1.087407e-03	ci left: 8.525092e-01	ci right 8.534372e-01	k: 1910661	n:2240000
KS ci ratio: 1.753075e+00	ci left: 4.865472e-07	ci right 4.572131e-06	k: 4	n:2240000
TMEM90B   2240000 perm   2090 sec   (1072 perm/sec)   p_kst 1.785714e-06   p_cons 8.529737e-01   p_joint 1.785714e-06

Joint ci ratio: 1.753075e+00	ci left: 4.843848e-07	ci right 4.551811e-06	k: 4	n:2250000
Cons ci ratio: 1.084868e-03	ci left: 8.525380e-01	ci right 8.534638e-01	k: 1919253	n:2250000
KS ci ratio: 1.753075e+00	ci left: 4.843848e-07	ci right 4.551811e-06	k: 4	n:2250000
TMEM90B   2250000 perm   2107 sec   (1068 perm/sec)   p_kst 1.777778e-06   p_cons 8.530013e-01   p_joint 1.777778e-06

Joint ci ratio: 1.753075e+00	ci left: 4.822415e-07	ci right 4.531670e-06	k: 4	n:2260000
Cons ci ratio: 1.082353e-03	ci left: 8.525651e-01	ci right 8.534888e-01	k: 1927842	n:2260000
KS ci ratio: 1.753075e+00	ci left: 4.822415e-07	ci right 4.531670e-06	k: 4	n:2260000
TMEM90B   2260000 perm   2124 sec   (1064 perm/sec)   p_kst 1.769912e-06   p_cons 8.530274e-01   p_joint 1.769912e-06

Joint ci ratio: 1.753075e+00	ci left: 4.801171e-07	ci right 4.511707e-06	k: 4	n:2270000
Cons ci ratio: 1.079991e-03	ci left: 8.525603e-01	ci right 8.534820e-01	k: 1936359	n:2270000
KS ci ratio: 1.753075e+00	ci left: 4.801171e-07	ci right 4.511707e-06	k: 4	n:2270000
TMEM90B   2270000 perm   2141 sec   (1060 perm/sec)   p_kst 1.762115e-06   p_cons 8.530216e-01   p_joint 1.762115e-06

Joint ci ratio: 1.753075e+00	ci left: 4.780113e-07	ci right 4.491919e-06	k: 4	n:2280000
Cons ci ratio: 1.077592e-03	ci left: 8.525678e-01	ci right 8.534874e-01	k: 1944904	n:2280000
KS ci ratio: 1.753075e+00	ci left: 4.780113e-07	ci right 4.491919e-06	k: 4	n:2280000
TMEM90B   2280000 perm   2159 sec   (1056 perm/sec)   p_kst 1.754386e-06   p_cons 8.530281e-01   p_joint 1.754386e-06

Joint ci ratio: 1.753075e+00	ci left: 4.759239e-07	ci right 4.472303e-06	k: 4	n:2290000
Cons ci ratio: 1.075222e-03	ci left: 8.525722e-01	ci right 8.534898e-01	k: 1953442	n:2290000
KS ci ratio: 1.753075e+00	ci left: 4.759239e-07	ci right 4.472303e-06	k: 4	n:2290000
TMEM90B   2290000 perm   2176 sec   (1052 perm/sec)   p_kst 1.746725e-06   p_cons 8.530314e-01   p_joint 1.746725e-06

Joint ci ratio: 1.600331e+00	ci left: 7.058640e-07	ci right 5.073181e-06	k: 5	n:2300000
Cons ci ratio: 1.072946e-03	ci left: 8.525582e-01	ci right 8.534739e-01	k: 1961938	n:2300000
KS ci ratio: 1.600331e+00	ci left: 7.058640e-07	ci right 5.073181e-06	k: 5	n:2300000
TMEM90B   2300000 perm   2195 sec   (1048 perm/sec)   p_kst 2.173913e-06   p_cons 8.530165e-01   p_joint 2.173913e-06

Joint ci ratio: 1.600331e+00	ci left: 7.028083e-07	ci right 5.051219e-06	k: 5	n:2310000
Cons ci ratio: 1.070564e-03	ci left: 8.525726e-01	ci right 8.534862e-01	k: 1970499	n:2310000
KS ci ratio: 1.600331e+00	ci left: 7.028083e-07	ci right 5.051219e-06	k: 5	n:2310000
TMEM90B   2310000 perm   2213 sec   (1044 perm/sec)   p_kst 2.164502e-06   p_cons 8.530299e-01   p_joint 2.164502e-06

Joint ci ratio: 1.600331e+00	ci left: 6.997790e-07	ci right 5.029446e-06	k: 5	n:2320000
Cons ci ratio: 1.068147e-03	ci left: 8.525989e-01	ci right 8.535105e-01	k: 1979088	n:2320000
KS ci ratio: 1.600331e+00	ci left: 6.997790e-07	ci right 5.029446e-06	k: 5	n:2320000
TMEM90B   2320000 perm   2230 sec   (1040 perm/sec)   p_kst 2.155172e-06   p_cons 8.530552e-01   p_joint 2.155172e-06

Joint ci ratio: 1.600331e+00	ci left: 6.967756e-07	ci right 5.007861e-06	k: 5	n:2330000
Cons ci ratio: 1.065818e-03	ci left: 8.526078e-01	ci right 8.535175e-01	k: 1987637	n:2330000
KS ci ratio: 1.600331e+00	ci left: 6.967756e-07	ci right 5.007861e-06	k: 5	n:2330000
TMEM90B   2330000 perm   2248 sec   (1036 perm/sec)   p_kst 2.145923e-06   p_cons 8.530631e-01   p_joint 2.145923e-06

Joint ci ratio: 1.600331e+00	ci left: 6.937980e-07	ci right 4.986460e-06	k: 5	n:2340000
Cons ci ratio: 1.063484e-03	ci left: 8.526218e-01	ci right 8.535295e-01	k: 1996198	n:2340000
KS ci ratio: 1.600331e+00	ci left: 6.937980e-07	ci right 4.986460e-06	k: 5	n:2340000
TMEM90B   2340000 perm   2266 sec   (1033 perm/sec)   p_kst 2.136752e-06   p_cons 8.530761e-01   p_joint 2.136752e-06

Joint ci ratio: 1.600331e+00	ci left: 6.908456e-07	ci right 4.965241e-06	k: 5	n:2350000
Cons ci ratio: 1.061258e-03	ci left: 8.526135e-01	ci right 8.535192e-01	k: 2004707	n:2350000
KS ci ratio: 1.600331e+00	ci left: 6.908456e-07	ci right 4.965241e-06	k: 5	n:2350000
TMEM90B   2350000 perm   2284 sec   (1029 perm/sec)   p_kst 2.127660e-06   p_cons 8.530668e-01   p_joint 2.127660e-06

Joint ci ratio: 1.600331e+00	ci left: 6.879183e-07	ci right 4.944202e-06	k: 5	n:2360000
Cons ci ratio: 1.059013e-03	ci left: 8.526129e-01	ci right 8.535167e-01	k: 2013234	n:2360000
KS ci ratio: 1.600331e+00	ci left: 6.879183e-07	ci right 4.944202e-06	k: 5	n:2360000
TMEM90B   2360000 perm   2302 sec   (1025 perm/sec)   p_kst 2.118644e-06   p_cons 8.530653e-01   p_joint 2.118644e-06

Joint ci ratio: 1.600331e+00	ci left: 6.850157e-07	ci right 4.923340e-06	k: 5	n:2370000
Cons ci ratio: 1.056749e-03	ci left: 8.526204e-01	ci right 8.535222e-01	k: 2021780	n:2370000
KS ci ratio: 1.600331e+00	ci left: 6.850157e-07	ci right 4.923340e-06	k: 5	n:2370000
TMEM90B   2370000 perm   2320 sec   (1021 perm/sec)   p_kst 2.109705e-06   p_cons 8.530717e-01   p_joint 2.109705e-06

Joint ci ratio: 1.600331e+00	ci left: 6.821375e-07	ci right 4.902654e-06	k: 5	n:2380000
Cons ci ratio: 1.054479e-03	ci left: 8.526328e-01	ci right 8.535327e-01	k: 2030338	n:2380000
KS ci ratio: 1.600331e+00	ci left: 6.821375e-07	ci right 4.902654e-06	k: 5	n:2380000
TMEM90B   2380000 perm   2338 sec   (1018 perm/sec)   p_kst 2.100840e-06   p_cons 8.530832e-01   p_joint 2.100840e-06

Joint ci ratio: 1.600331e+00	ci left: 6.792833e-07	ci right 4.882141e-06	k: 5	n:2390000
Cons ci ratio: 1.052158e-03	ci left: 8.526606e-01	ci right 8.535586e-01	k: 2038933	n:2390000
KS ci ratio: 1.600331e+00	ci left: 6.792833e-07	ci right 4.882141e-06	k: 5	n:2390000
TMEM90B   2390000 perm   2357 sec   (1014 perm/sec)   p_kst 2.092050e-06   p_cons 8.531100e-01   p_joint 2.092050e-06

Joint ci ratio: 1.600331e+00	ci left: 6.764530e-07	ci right 4.861798e-06	k: 5	n:2400000
Cons ci ratio: 1.049920e-03	ci left: 8.526719e-01	ci right 8.535680e-01	k: 2047489	n:2400000
KS ci ratio: 1.600331e+00	ci left: 6.764530e-07	ci right 4.861798e-06	k: 5	n:2400000
TMEM90B   2400000 perm   2375 sec   (1011 perm/sec)   p_kst 2.083333e-06   p_cons 8.531204e-01   p_joint 2.083333e-06

Joint ci ratio: 1.600331e+00	ci left: 6.736461e-07	ci right 4.841625e-06	k: 5	n:2410000
Cons ci ratio: 1.047764e-03	ci left: 8.526670e-01	ci right 8.535612e-01	k: 2056006	n:2410000
KS ci ratio: 1.600331e+00	ci left: 6.736461e-07	ci right 4.841625e-06	k: 5	n:2410000
TMEM90B   2410000 perm   2393 sec   (1007 perm/sec)   p_kst 2.074689e-06   p_cons 8.531145e-01   p_joint 2.074689e-06

Joint ci ratio: 1.600331e+00	ci left: 6.708625e-07	ci right 4.821618e-06	k: 5	n:2420000
Cons ci ratio: 1.045658e-03	ci left: 8.526534e-01	ci right 8.535458e-01	k: 2064502	n:2420000
KS ci ratio: 1.600331e+00	ci left: 6.708625e-07	ci right 4.821618e-06	k: 5	n:2420000
TMEM90B   2420000 perm   2411 sec   (1004 perm/sec)   p_kst 2.066116e-06   p_cons 8.531000e-01   p_joint 2.066116e-06

Joint ci ratio: 1.600331e+00	ci left: 6.681017e-07	ci right 4.801776e-06	k: 5	n:2430000
Cons ci ratio: 1.043495e-03	ci left: 8.526563e-01	ci right 8.535469e-01	k: 2073038	n:2430000
KS ci ratio: 1.600331e+00	ci left: 6.681017e-07	ci right 4.801776e-06	k: 5	n:2430000
TMEM90B   2430000 perm   2429 sec   (1000 perm/sec)   p_kst 2.057613e-06   p_cons 8.531021e-01   p_joint 2.057613e-06

Joint ci ratio: 1.600331e+00	ci left: 6.653636e-07	ci right 4.782097e-06	k: 5	n:2440000
Cons ci ratio: 1.041379e-03	ci left: 8.526515e-01	ci right 8.535403e-01	k: 2081555	n:2440000
KS ci ratio: 1.600331e+00	ci left: 6.653636e-07	ci right 4.782097e-06	k: 5	n:2440000
TMEM90B   2440000 perm   2448 sec   (997 perm/sec)   p_kst 2.049180e-06   p_cons 8.530963e-01   p_joint 2.049180e-06

Joint ci ratio: 1.600331e+00	ci left: 6.626478e-07	ci right 4.762578e-06	k: 5	n:2450000
Cons ci ratio: 1.039256e-03	ci left: 8.526512e-01	ci right 8.535382e-01	k: 2090083	n:2450000
KS ci ratio: 1.600331e+00	ci left: 6.626478e-07	ci right 4.762578e-06	k: 5	n:2450000
TMEM90B   2450000 perm   2466 sec   (993 perm/sec)   p_kst 2.040816e-06   p_cons 8.530951e-01   p_joint 2.040816e-06

Joint ci ratio: 1.600331e+00	ci left: 6.599541e-07	ci right 4.743218e-06	k: 5	n:2460000
Cons ci ratio: 1.037054e-03	ci left: 8.526733e-01	ci right 8.535584e-01	k: 2098666	n:2460000
KS ci ratio: 1.600331e+00	ci left: 6.599541e-07	ci right 4.743218e-06	k: 5	n:2460000
TMEM90B   2460000 perm   2485 sec   (990 perm/sec)   p_kst 2.032520e-06   p_cons 8.531163e-01   p_joint 2.032520e-06

Joint ci ratio: 1.600331e+00	ci left: 6.572823e-07	ci right 4.724015e-06	k: 5	n:2470000
Cons ci ratio: 1.034977e-03	ci left: 8.526684e-01	ci right 8.535518e-01	k: 2107183	n:2470000
KS ci ratio: 1.600331e+00	ci left: 6.572823e-07	ci right 4.724015e-06	k: 5	n:2470000
TMEM90B   2470000 perm   2504 sec   (987 perm/sec)   p_kst 2.024291e-06   p_cons 8.531105e-01   p_joint 2.024291e-06

Joint ci ratio: 1.600331e+00	ci left: 6.546319e-07	ci right 4.704966e-06	k: 5	n:2480000
Cons ci ratio: 1.032934e-03	ci left: 8.526580e-01	ci right 8.535396e-01	k: 2115686	n:2480000
KS ci ratio: 1.600331e+00	ci left: 6.546319e-07	ci right 4.704966e-06	k: 5	n:2480000
TMEM90B   2480000 perm   2523 sec   (983 perm/sec)   p_kst 2.016129e-06   p_cons 8.530992e-01   p_joint 2.016129e-06

Joint ci ratio: 1.600331e+00	ci left: 6.520029e-07	ci right 4.686071e-06	k: 5	n:2490000
Cons ci ratio: 1.030939e-03	ci left: 8.526392e-01	ci right 8.535190e-01	k: 2124168	n:2490000
KS ci ratio: 1.600331e+00	ci left: 6.520029e-07	ci right 4.686071e-06	k: 5	n:2490000
TMEM90B   2490000 perm   2541 sec   (980 perm/sec)   p_kst 2.008032e-06   p_cons 8.530795e-01   p_joint 2.008032e-06

Joint ci ratio: 1.600331e+00	ci left: 6.493949e-07	ci right 4.667327e-06	k: 5	n:2500000
Cons ci ratio: 1.060197e-03	ci left: 8.449533e-01	ci right 8.458499e-01	k: 2113505	n:2500000
KS ci ratio: 1.600331e+00	ci left: 6.493949e-07	ci right 4.667327e-06	k: 5	n:2500000
TMEM90B   2500000 perm   2561 sec   (976 perm/sec)   p_kst 2.000000e-06   p_cons 8.454020e-01   p_joint 2.000000e-06

Joint ci ratio: 1.600331e+00	ci left: 6.468076e-07	ci right 4.648732e-06	k: 5	n:2510000
Cons ci ratio: 1.058136e-03	ci left: 8.449410e-01	ci right 8.458359e-01	k: 2121926	n:2510000
KS ci ratio: 1.600331e+00	ci left: 6.468076e-07	ci right 4.648732e-06	k: 5	n:2510000
TMEM90B   2510000 perm   2579 sec   (973 perm/sec)   p_kst 1.992032e-06   p_cons 8.453888e-01   p_joint 1.992032e-06

Joint ci ratio: 1.600331e+00	ci left: 6.442409e-07	ci right 4.630284e-06	k: 5	n:2520000
Cons ci ratio: 1.056065e-03	ci left: 8.449344e-01	ci right 8.458275e-01	k: 2130361	n:2520000
KS ci ratio: 1.600331e+00	ci left: 6.442409e-07	ci right 4.630284e-06	k: 5	n:2520000
TMEM90B   2520000 perm   2598 sec   (970 perm/sec)   p_kst 1.984127e-06   p_cons 8.453813e-01   p_joint 1.984127e-06

Joint ci ratio: 1.600331e+00	ci left: 6.416945e-07	ci right 4.611983e-06	k: 5	n:2530000
Cons ci ratio: 1.053999e-03	ci left: 8.449294e-01	ci right 8.458208e-01	k: 2138800	n:2530000
KS ci ratio: 1.600331e+00	ci left: 6.416945e-07	ci right 4.611983e-06	k: 5	n:2530000
TMEM90B   2530000 perm   2617 sec   (967 perm/sec)   p_kst 1.976285e-06   p_cons 8.453755e-01   p_joint 1.976285e-06

Joint ci ratio: 1.600331e+00	ci left: 6.391682e-07	ci right 4.593825e-06	k: 5	n:2540000
Cons ci ratio: 1.051902e-03	ci left: 8.449355e-01	ci right 8.458251e-01	k: 2147267	n:2540000
KS ci ratio: 1.600331e+00	ci left: 6.391682e-07	ci right 4.593825e-06	k: 5	n:2540000
TMEM90B   2540000 perm   2636 sec   (964 perm/sec)   p_kst 1.968504e-06   p_cons 8.453807e-01   p_joint 1.968504e-06

Joint ci ratio: 1.600331e+00	ci left: 6.366616e-07	ci right 4.575811e-06	k: 5	n:2550000
Cons ci ratio: 1.049860e-03	ci left: 8.449306e-01	ci right 8.458185e-01	k: 2155706	n:2550000
KS ci ratio: 1.600331e+00	ci left: 6.366616e-07	ci right 4.575811e-06	k: 5	n:2550000
TMEM90B   2550000 perm   2655 sec   (960 perm/sec)   p_kst 1.960784e-06   p_cons 8.453749e-01   p_joint 1.960784e-06

Joint ci ratio: 1.600331e+00	ci left: 6.341747e-07	ci right 4.557936e-06	k: 5	n:2560000
Cons ci ratio: 1.047709e-03	ci left: 8.449562e-01	ci right 8.458423e-01	k: 2164223	n:2560000
KS ci ratio: 1.600331e+00	ci left: 6.341747e-07	ci right 4.557936e-06	k: 5	n:2560000
TMEM90B   2560000 perm   2674 sec   (957 perm/sec)   p_kst 1.953125e-06   p_cons 8.453996e-01   p_joint 1.953125e-06

Joint ci ratio: 1.600331e+00	ci left: 6.317071e-07	ci right 4.540201e-06	k: 5	n:2570000
Cons ci ratio: 1.045654e-03	ci left: 8.449605e-01	ci right 8.458449e-01	k: 2172686	n:2570000
KS ci ratio: 1.600331e+00	ci left: 6.317071e-07	ci right 4.540201e-06	k: 5	n:2570000
TMEM90B   2570000 perm   2694 sec   (954 perm/sec)   p_kst 1.945525e-06   p_cons 8.454031e-01   p_joint 1.945525e-06

Joint ci ratio: 1.600331e+00	ci left: 6.292586e-07	ci right 4.522603e-06	k: 5	n:2580000
Cons ci ratio: 1.043643e-03	ci left: 8.449571e-01	ci right 8.458398e-01	k: 2181129	n:2580000
KS ci ratio: 1.600331e+00	ci left: 6.292586e-07	ci right 4.522603e-06	k: 5	n:2580000
TMEM90B   2580000 perm   2714 sec   (951 perm/sec)   p_kst 1.937984e-06   p_cons 8.453988e-01   p_joint 1.937984e-06

Joint ci ratio: 1.600331e+00	ci left: 6.268290e-07	ci right 4.505142e-06	k: 5	n:2590000
Cons ci ratio: 1.041608e-03	ci left: 8.449626e-01	ci right 8.458436e-01	k: 2189595	n:2590000
KS ci ratio: 1.600331e+00	ci left: 6.268290e-07	ci right 4.505142e-06	k: 5	n:2590000
TMEM90B   2590000 perm   2733 sec   (948 perm/sec)   p_kst 1.930502e-06   p_cons 8.454035e-01   p_joint 1.930502e-06

Joint ci ratio: 1.600331e+00	ci left: 6.244181e-07	ci right 4.487814e-06	k: 5	n:2600000
Cons ci ratio: 1.039537e-03	ci left: 8.449800e-01	ci right 8.458592e-01	k: 2198092	n:2600000
KS ci ratio: 1.600331e+00	ci left: 6.244181e-07	ci right 4.487814e-06	k: 5	n:2600000
TMEM90B   2600000 perm   2753 sec   (944 perm/sec)   p_kst 1.923077e-06   p_cons 8.454200e-01   p_joint 1.923077e-06

Joint ci ratio: 1.600331e+00	ci left: 6.220257e-07	ci right 4.470620e-06	k: 5	n:2610000
Cons ci ratio: 1.037675e-03	ci left: 8.449478e-01	ci right 8.458254e-01	k: 2206460	n:2610000
KS ci ratio: 1.600331e+00	ci left: 6.220257e-07	ci right 4.470620e-06	k: 5	n:2610000
TMEM90B   2610000 perm   2773 sec   (941 perm/sec)   p_kst 1.915709e-06   p_cons 8.453870e-01   p_joint 1.915709e-06

Joint ci ratio: 1.600331e+00	ci left: 6.196516e-07	ci right 4.453556e-06	k: 5	n:2620000
Cons ci ratio: 1.035638e-03	ci left: 8.449624e-01	ci right 8.458383e-01	k: 2214950	n:2620000
KS ci ratio: 1.600331e+00	ci left: 6.196516e-07	ci right 4.453556e-06	k: 5	n:2620000
TMEM90B   2620000 perm   2793 sec   (938 perm/sec)   p_kst 1.908397e-06   p_cons 8.454008e-01   p_joint 1.908397e-06

Joint ci ratio: 1.600331e+00	ci left: 6.172955e-07	ci right 4.436623e-06	k: 5	n:2630000
Cons ci ratio: 1.033735e-03	ci left: 8.449461e-01	ci right 8.458204e-01	k: 2223359	n:2630000
KS ci ratio: 1.600331e+00	ci left: 6.172955e-07	ci right 4.436623e-06	k: 5	n:2630000
TMEM90B   2630000 perm   2812 sec   (935 perm/sec)   p_kst 1.901141e-06   p_cons 8.453837e-01   p_joint 1.901141e-06

Joint ci ratio: 1.753075e+00	ci left: 4.128279e-07	ci right 3.879385e-06	k: 4	n:2640000
Cons ci ratio: 1.031817e-03	ci left: 8.449364e-01	ci right 8.458090e-01	k: 2231785	n:2640000
KS ci ratio: 1.481618e+00	ci left: 8.340513e-07	ci right 4.946764e-06	k: 6	n:2640000
TMEM90B   2640000 perm   2832 sec   (932 perm/sec)   p_kst 2.272727e-06   p_cons 8.453731e-01   p_joint 1.515152e-06

Joint ci ratio: 1.753075e+00	ci left: 4.112701e-07	ci right 3.864746e-06	k: 4	n:2650000
Cons ci ratio: 1.029911e-03	ci left: 8.449264e-01	ci right 8.457974e-01	k: 2240210	n:2650000
KS ci ratio: 1.481618e+00	ci left: 8.309039e-07	ci right 4.928097e-06	k: 6	n:2650000
TMEM90B   2650000 perm   2852 sec   (929 perm/sec)   p_kst 2.264151e-06   p_cons 8.453623e-01   p_joint 1.509434e-06

Joint ci ratio: 1.753075e+00	ci left: 4.097240e-07	ci right 3.850217e-06	k: 4	n:2660000
Cons ci ratio: 1.028026e-03	ci left: 8.449138e-01	ci right 8.457832e-01	k: 2248628	n:2660000
KS ci ratio: 1.481619e+00	ci left: 8.277802e-07	ci right 4.909570e-06	k: 6	n:2660000
TMEM90B   2660000 perm   2872 sec   (926 perm/sec)   p_kst 2.255639e-06   p_cons 8.453489e-01   p_joint 1.503759e-06

Joint ci ratio: 1.753075e+00	ci left: 4.081894e-07	ci right 3.835797e-06	k: 4	n:2670000
Cons ci ratio: 1.026060e-03	ci left: 8.449246e-01	ci right 8.457923e-01	k: 2257108	n:2670000
KS ci ratio: 1.481619e+00	ci left: 8.246799e-07	ci right 4.891182e-06	k: 6	n:2670000
TMEM90B   2670000 perm   2892 sec   (923 perm/sec)   p_kst 2.247191e-06   p_cons 8.453588e-01   p_joint 1.498127e-06

Joint ci ratio: 1.753075e+00	ci left: 4.066663e-07	ci right 3.821484e-06	k: 4	n:2680000
Cons ci ratio: 1.024156e-03	ci left: 8.449222e-01	ci right 8.457883e-01	k: 2265553	n:2680000
KS ci ratio: 1.481619e+00	ci left: 8.216028e-07	ci right 4.872932e-06	k: 6	n:2680000
TMEM90B   2680000 perm   2912 sec   (920 perm/sec)   p_kst 2.238806e-06   p_cons 8.453556e-01   p_joint 1.492537e-06

Joint ci ratio: 1.753075e+00	ci left: 4.051546e-07	ci right 3.807278e-06	k: 4	n:2690000
Cons ci ratio: 1.022247e-03	ci left: 8.449239e-01	ci right 8.457884e-01	k: 2274009	n:2690000
KS ci ratio: 1.481619e+00	ci left: 8.185485e-07	ci right 4.854817e-06	k: 6	n:2690000
TMEM90B   2690000 perm   2932 sec   (917 perm/sec)   p_kst 2.230483e-06   p_cons 8.453565e-01   p_joint 1.486989e-06

Joint ci ratio: 1.753075e+00	ci left: 4.036540e-07	ci right 3.793177e-06	k: 4	n:2700000
Cons ci ratio: 1.020381e-03	ci left: 8.449174e-01	ci right 8.457804e-01	k: 2282443	n:2700000
KS ci ratio: 1.481619e+00	ci left: 8.155168e-07	ci right 4.836836e-06	k: 6	n:2700000
TMEM90B   2700000 perm   2952 sec   (915 perm/sec)   p_kst 2.222222e-06   p_cons 8.453493e-01   p_joint 1.481481e-06

Joint ci ratio: 1.753075e+00	ci left: 4.021645e-07	ci right 3.779180e-06	k: 4	n:2710000
Cons ci ratio: 1.018450e-03	ci left: 8.449302e-01	ci right 8.457915e-01	k: 2290929	n:2710000
KS ci ratio: 1.481619e+00	ci left: 8.125075e-07	ci right 4.818988e-06	k: 6	n:2710000
TMEM90B   2710000 perm   2973 sec   (912 perm/sec)   p_kst 2.214022e-06   p_cons 8.453613e-01   p_joint 1.476015e-06

Joint ci ratio: 1.753075e+00	ci left: 4.006859e-07	ci right 3.765286e-06	k: 4	n:2720000
Cons ci ratio: 1.016515e-03	ci left: 8.449466e-01	ci right 8.458063e-01	k: 2299425	n:2720000
KS ci ratio: 1.481619e+00	ci left: 8.095204e-07	ci right 4.801271e-06	k: 6	n:2720000
TMEM90B   2720000 perm   2993 sec   (909 perm/sec)   p_kst 2.205882e-06   p_cons 8.453768e-01   p_joint 1.470588e-06

Joint ci ratio: 1.753075e+00	ci left: 3.992182e-07	ci right 3.751493e-06	k: 4	n:2730000
Cons ci ratio: 1.014681e-03	ci left: 8.449398e-01	ci right 8.457979e-01	k: 2307858	n:2730000
KS ci ratio: 1.481619e+00	ci left: 8.065551e-07	ci right 4.783684e-06	k: 6	n:2730000
TMEM90B   2730000 perm   3014 sec   (906 perm/sec)   p_kst 2.197802e-06   p_cons 8.453692e-01   p_joint 1.465201e-06

Joint ci ratio: 1.753075e+00	ci left: 3.977612e-07	ci right 3.737802e-06	k: 4	n:2740000
Cons ci ratio: 1.012753e-03	ci left: 8.449601e-01	ci right 8.458166e-01	k: 2316365	n:2740000
KS ci ratio: 1.481619e+00	ci left: 8.036115e-07	ci right 4.766225e-06	k: 6	n:2740000
TMEM90B   2740000 perm   3034 sec   (903 perm/sec)   p_kst 2.189781e-06   p_cons 8.453887e-01   p_joint 1.459854e-06

Joint ci ratio: 1.753075e+00	ci left: 3.963148e-07	ci right 3.724210e-06	k: 4	n:2750000
Cons ci ratio: 1.010931e-03	ci left: 8.449554e-01	ci right 8.458104e-01	k: 2324804	n:2750000
KS ci ratio: 1.481619e+00	ci left: 8.006892e-07	ci right 4.748894e-06	k: 6	n:2750000
TMEM90B   2750000 perm   3055 sec   (900 perm/sec)   p_kst 2.181818e-06   p_cons 8.453833e-01   p_joint 1.454545e-06

Joint ci ratio: 1.753075e+00	ci left: 3.948789e-07	ci right 3.710716e-06	k: 4	n:2760000
Cons ci ratio: 1.009002e-03	ci left: 8.449809e-01	ci right 8.458343e-01	k: 2333326	n:2760000
KS ci ratio: 1.481619e+00	ci left: 7.977882e-07	ci right 4.731687e-06	k: 6	n:2760000
TMEM90B   2760000 perm   3076 sec   (897 perm/sec)   p_kst 2.173913e-06   p_cons 8.454080e-01   p_joint 1.449275e-06

Joint ci ratio: 1.753075e+00	ci left: 3.934533e-07	ci right 3.697320e-06	k: 4	n:2770000
Cons ci ratio: 1.007196e-03	ci left: 8.449773e-01	ci right 8.458292e-01	k: 2341768	n:2770000
KS ci ratio: 1.481619e+00	ci left: 7.949081e-07	ci right 4.714606e-06	k: 6	n:2770000
TMEM90B   2770000 perm   3097 sec   (894 perm/sec)   p_kst 2.166065e-06   p_cons 8.454036e-01   p_joint 1.444043e-06

Joint ci ratio: 1.753075e+00	ci left: 3.920380e-07	ci right 3.684021e-06	k: 4	n:2780000
Cons ci ratio: 1.005310e-03	ci left: 8.449972e-01	ci right 8.458474e-01	k: 2350275	n:2780000
KS ci ratio: 1.481619e+00	ci left: 7.920487e-07	ci right 4.697647e-06	k: 6	n:2780000
TMEM90B   2780000 perm   3119 sec   (891 perm/sec)   p_kst 2.158273e-06   p_cons 8.454227e-01   p_joint 1.438849e-06

Joint ci ratio: 1.753075e+00	ci left: 3.906329e-07	ci right 3.670816e-06	k: 4	n:2790000
Cons ci ratio: 1.003483e-03	ci left: 8.450040e-01	ci right 8.458527e-01	k: 2358746	n:2790000
KS ci ratio: 1.481619e+00	ci left: 7.892098e-07	ci right 4.680809e-06	k: 6	n:2790000
TMEM90B   2790000 perm   3140 sec   (889 perm/sec)   p_kst 2.150538e-06   p_cons 8.454287e-01   p_joint 1.433692e-06

Joint ci ratio: 1.753075e+00	ci left: 3.892378e-07	ci right 3.657706e-06	k: 4	n:2800000
Cons ci ratio: 1.001627e-03	ci left: 8.450211e-01	ci right 8.458682e-01	k: 2367246	n:2800000
KS ci ratio: 1.481619e+00	ci left: 7.863912e-07	ci right 4.664092e-06	k: 6	n:2800000
TMEM90B   2800000 perm   3161 sec   (886 perm/sec)   p_kst 2.142857e-06   p_cons 8.454450e-01   p_joint 1.428571e-06

Joint ci ratio: 1.753075e+00	ci left: 3.878526e-07	ci right 3.644689e-06	k: 4	n:2810000
Cons ci ratio: 9.998466e-04	ci left: 8.450209e-01	ci right 8.458666e-01	k: 2375698	n:2810000
KS ci ratio: 1.481619e+00	ci left: 7.835927e-07	ci right 4.647494e-06	k: 6	n:2810000
TMEM90B   2810000 perm   3182 sec   (883 perm/sec)   p_kst 2.135231e-06   p_cons 8.454441e-01   p_joint 1.423488e-06

Joint ci ratio: 1.753075e+00	ci left: 3.864772e-07	ci right 3.631765e-06	k: 4	n:2820000
Cons ci ratio: 9.980769e-04	ci left: 8.450205e-01	ci right 8.458646e-01	k: 2384149	n:2820000
KS ci ratio: 1.481619e+00	ci left: 7.808140e-07	ci right 4.631013e-06	k: 6	n:2820000
TMEM90B   2820000 perm   3203 sec   (880 perm/sec)   p_kst 2.127660e-06   p_cons 8.454429e-01   p_joint 1.418440e-06

Joint ci ratio: 1.753075e+00	ci left: 3.851116e-07	ci right 3.618932e-06	k: 4	n:2830000
Cons ci ratio: 9.962883e-04	ci left: 8.450274e-01	ci right 8.458701e-01	k: 2392621	n:2830000
KS ci ratio: 1.481619e+00	ci left: 7.780549e-07	ci right 4.614649e-06	k: 6	n:2830000
TMEM90B   2830000 perm   3225 sec   (878 perm/sec)   p_kst 2.120141e-06   p_cons 8.454491e-01   p_joint 1.413428e-06

Joint ci ratio: 1.753075e+00	ci left: 3.837555e-07	ci right 3.606189e-06	k: 4	n:2840000
Cons ci ratio: 9.945320e-04	ci left: 8.450284e-01	ci right 8.458695e-01	k: 2401076	n:2840000
KS ci ratio: 1.481619e+00	ci left: 7.753153e-07	ci right 4.598401e-06	k: 6	n:2840000
TMEM90B   2840000 perm   3246 sec   (875 perm/sec)   p_kst 2.112676e-06   p_cons 8.454493e-01   p_joint 1.408451e-06

Joint ci ratio: 1.600331e+00	ci left: 5.696446e-07	ci right 4.094147e-06	k: 5	n:2850000
Cons ci ratio: 9.927837e-04	ci left: 8.450296e-01	ci right 8.458693e-01	k: 2409532	n:2850000
KS ci ratio: 1.385927e+00	ci left: 9.874964e-07	ci right 5.060581e-06	k: 7	n:2850000
TMEM90B   2850000 perm   3267 sec   (872 perm/sec)   p_kst 2.456140e-06   p_cons 8.454498e-01   p_joint 1.754386e-06

Joint ci ratio: 1.600331e+00	ci left: 5.676528e-07	ci right 4.079832e-06	k: 5	n:2860000
Cons ci ratio: 9.910101e-04	ci left: 8.450400e-01	ci right 8.458782e-01	k: 2418014	n:2860000
KS ci ratio: 1.385927e+00	ci left: 9.840436e-07	ci right 5.042887e-06	k: 7	n:2860000
TMEM90B   2860000 perm   3289 sec   (870 perm/sec)   p_kst 2.447552e-06   p_cons 8.454594e-01   p_joint 1.748252e-06

Joint ci ratio: 1.600331e+00	ci left: 5.656749e-07	ci right 4.065616e-06	k: 5	n:2870000
Cons ci ratio: 9.892327e-04	ci left: 8.450538e-01	ci right 8.458905e-01	k: 2426506	n:2870000
KS ci ratio: 1.385927e+00	ci left: 9.806148e-07	ci right 5.025316e-06	k: 7	n:2870000
TMEM90B   2870000 perm   3310 sec   (867 perm/sec)   p_kst 2.439024e-06   p_cons 8.454725e-01   p_joint 1.742160e-06

Joint ci ratio: 1.600331e+00	ci left: 5.637108e-07	ci right 4.051500e-06	k: 5	n:2880000
Cons ci ratio: 9.875279e-04	ci left: 8.450508e-01	ci right 8.458860e-01	k: 2434950	n:2880000
KS ci ratio: 1.385927e+00	ci left: 9.772099e-07	ci right 5.007867e-06	k: 7	n:2880000
TMEM90B   2880000 perm   3332 sec   (864 perm/sec)   p_kst 2.430556e-06   p_cons 8.454687e-01   p_joint 1.736111e-06

Joint ci ratio: 1.600331e+00	ci left: 5.617602e-07	ci right 4.037480e-06	k: 5	n:2890000
Cons ci ratio: 9.858240e-04	ci left: 8.450499e-01	ci right 8.458837e-01	k: 2443400	n:2890000
KS ci ratio: 1.385927e+00	ci left: 9.738286e-07	ci right 4.990539e-06	k: 7	n:2890000
TMEM90B   2890000 perm   3354 sec   (862 perm/sec)   p_kst 2.422145e-06   p_cons 8.454671e-01   p_joint 1.730104e-06

Joint ci ratio: 1.600331e+00	ci left: 5.598231e-07	ci right 4.023558e-06	k: 5	n:2900000
Cons ci ratio: 9.840497e-04	ci left: 8.450700e-01	ci right 8.459024e-01	k: 2451911	n:2900000
KS ci ratio: 1.385927e+00	ci left: 9.704706e-07	ci right 4.973330e-06	k: 7	n:2900000
TMEM90B   2900000 perm   3376 sec   (859 perm/sec)   p_kst 2.413793e-06   p_cons 8.454866e-01   p_joint 1.724138e-06

Joint ci ratio: 1.600331e+00	ci left: 5.578993e-07	ci right 4.009732e-06	k: 5	n:2910000
Cons ci ratio: 9.823198e-04	ci left: 8.450808e-01	ci right 8.459117e-01	k: 2460395	n:2910000
KS ci ratio: 1.385927e+00	ci left: 9.671356e-07	ci right 4.956240e-06	k: 7	n:2910000
TMEM90B   2910000 perm   3398 sec   (856 perm/sec)   p_kst 2.405498e-06   p_cons 8.454966e-01   p_joint 1.718213e-06

Joint ci ratio: 1.600331e+00	ci left: 5.559887e-07	ci right 3.996000e-06	k: 5	n:2920000
Cons ci ratio: 9.805668e-04	ci left: 8.451000e-01	ci right 8.459294e-01	k: 2468904	n:2920000
KS ci ratio: 1.385927e+00	ci left: 9.638235e-07	ci right 4.939266e-06	k: 7	n:2920000
TMEM90B   2920000 perm   3420 sec   (854 perm/sec)   p_kst 2.397260e-06   p_cons 8.455151e-01   p_joint 1.712329e-06

Joint ci ratio: 1.600331e+00	ci left: 5.540911e-07	ci right 3.982361e-06	k: 5	n:2930000
Cons ci ratio: 9.788833e-04	ci left: 8.451031e-01	ci right 8.459311e-01	k: 2477366	n:2930000
KS ci ratio: 1.385927e+00	ci left: 9.605340e-07	ci right 4.922409e-06	k: 7	n:2930000
TMEM90B   2930000 perm   3442 sec   (851 perm/sec)   p_kst 2.389078e-06   p_cons 8.455174e-01   p_joint 1.706485e-06

Joint ci ratio: 1.600331e+00	ci left: 5.522065e-07	ci right 3.968816e-06	k: 5	n:2940000
Cons ci ratio: 9.771754e-04	ci left: 8.451150e-01	ci right 8.459415e-01	k: 2485854	n:2940000
KS ci ratio: 1.385927e+00	ci left: 9.572669e-07	ci right 4.905666e-06	k: 7	n:2940000
TMEM90B   2940000 perm   3464 sec   (849 perm/sec)   p_kst 2.380952e-06   p_cons 8.455286e-01   p_joint 1.700680e-06

Joint ci ratio: 1.600331e+00	ci left: 5.503346e-07	ci right 3.955362e-06	k: 5	n:2950000
Cons ci ratio: 9.755459e-04	ci left: 8.451081e-01	ci right 8.459333e-01	k: 2494287	n:2950000
KS ci ratio: 1.385927e+00	ci left: 9.540219e-07	ci right 4.889036e-06	k: 7	n:2950000
TMEM90B   2950000 perm   3487 sec   (846 perm/sec)   p_kst 2.372881e-06   p_cons 8.455210e-01   p_joint 1.694915e-06

Joint ci ratio: 1.600331e+00	ci left: 5.484754e-07	ci right 3.942000e-06	k: 5	n:2960000
Cons ci ratio: 9.738957e-04	ci left: 8.451091e-01	ci right 8.459328e-01	k: 2502743	n:2960000
KS ci ratio: 1.385927e+00	ci left: 9.507988e-07	ci right 4.872519e-06	k: 7	n:2960000
TMEM90B   2960000 perm   3509 sec   (844 perm/sec)   p_kst 2.364865e-06   p_cons 8.455213e-01   p_joint 1.689189e-06

Joint ci ratio: 1.600331e+00	ci left: 5.466286e-07	ci right 3.928727e-06	k: 5	n:2970000
Cons ci ratio: 9.722387e-04	ci left: 8.451141e-01	ci right 8.459364e-01	k: 2511211	n:2970000
KS ci ratio: 1.385927e+00	ci left: 9.475975e-07	ci right 4.856114e-06	k: 7	n:2970000
TMEM90B   2970000 perm   3531 sec   (841 perm/sec)   p_kst 2.356902e-06   p_cons 8.455256e-01   p_joint 1.683502e-06

Joint ci ratio: 1.600331e+00	ci left: 5.447943e-07	ci right 3.915543e-06	k: 5	n:2980000
Cons ci ratio: 9.706313e-04	ci left: 8.451080e-01	ci right 8.459290e-01	k: 2519646	n:2980000
KS ci ratio: 1.385927e+00	ci left: 9.444176e-07	ci right 4.839818e-06	k: 7	n:2980000
TMEM90B   2980000 perm   3554 sec   (839 perm/sec)   p_kst 2.348993e-06   p_cons 8.455188e-01   p_joint 1.677852e-06

Joint ci ratio: 1.600331e+00	ci left: 5.429723e-07	ci right 3.902448e-06	k: 5	n:2990000
Cons ci ratio: 9.690021e-04	ci left: 8.451099e-01	ci right 8.459295e-01	k: 2528105	n:2990000
KS ci ratio: 1.385927e+00	ci left: 9.412590e-07	ci right 4.823631e-06	k: 7	n:2990000
TMEM90B   2990000 perm   3576 sec   (836 perm/sec)   p_kst 2.341137e-06   p_cons 8.455201e-01   p_joint 1.672241e-06

Joint ci ratio: 1.600331e+00	ci left: 5.411623e-07	ci right 3.889440e-06	k: 5	n:3000000
Cons ci ratio: 9.673354e-04	ci left: 8.451242e-01	ci right 8.459424e-01	k: 2536601	n:3000000
KS ci ratio: 1.385927e+00	ci left: 9.381215e-07	ci right 4.807553e-06	k: 7	n:3000000
TMEM90B   3000000 perm   3599 sec   (834 perm/sec)   p_kst 2.333333e-06   p_cons 8.455337e-01   p_joint 1.666667e-06

Joint ci ratio: 1.600331e+00	ci left: 5.393645e-07	ci right 3.876518e-06	k: 5	n:3010000
Cons ci ratio: 9.657792e-04	ci left: 8.451108e-01	ci right 8.459277e-01	k: 2545014	n:3010000
KS ci ratio: 1.385927e+00	ci left: 9.350048e-07	ci right 4.791581e-06	k: 7	n:3010000
TMEM90B   3010000 perm   3621 sec   (831 perm/sec)   p_kst 2.325581e-06   p_cons 8.455196e-01   p_joint 1.661130e-06

Joint ci ratio: 1.600331e+00	ci left: 5.375785e-07	ci right 3.863682e-06	k: 5	n:3020000
Cons ci ratio: 9.641706e-04	ci left: 8.451138e-01	ci right 8.459293e-01	k: 2553476	n:3020000
KS ci ratio: 1.385927e+00	ci left: 9.319088e-07	ci right 4.775714e-06	k: 7	n:3020000
TMEM90B   3020000 perm   3644 sec   (829 perm/sec)   p_kst 2.317881e-06   p_cons 8.455219e-01   p_joint 1.655629e-06

Joint ci ratio: 1.600331e+00	ci left: 5.358043e-07	ci right 3.850930e-06	k: 5	n:3030000
Cons ci ratio: 9.625274e-04	ci left: 8.451282e-01	ci right 8.459424e-01	k: 2561973	n:3030000
KS ci ratio: 1.385927e+00	ci left: 9.288332e-07	ci right 4.759953e-06	k: 7	n:3030000
TMEM90B   3030000 perm   3667 sec   (826 perm/sec)   p_kst 2.310231e-06   p_cons 8.455356e-01   p_joint 1.650165e-06

Joint ci ratio: 1.600331e+00	ci left: 5.340418e-07	ci right 3.838263e-06	k: 5	n:3040000
Cons ci ratio: 9.609882e-04	ci left: 8.451166e-01	ci right 8.459295e-01	k: 2570391	n:3040000
KS ci ratio: 1.385927e+00	ci left: 9.257778e-07	ci right 4.744295e-06	k: 7	n:3040000
TMEM90B   3040000 perm   3689 sec   (824 perm/sec)   p_kst 2.302632e-06   p_cons 8.455234e-01   p_joint 1.644737e-06

Joint ci ratio: 1.600331e+00	ci left: 5.322908e-07	ci right 3.825678e-06	k: 5	n:3050000
Cons ci ratio: 9.594250e-04	ci left: 8.451136e-01	ci right 8.459251e-01	k: 2578835	n:3050000
KS ci ratio: 1.385927e+00	ci left: 9.227425e-07	ci right 4.728740e-06	k: 7	n:3050000
TMEM90B   3050000 perm   3712 sec   (822 perm/sec)   p_kst 2.295082e-06   p_cons 8.455197e-01   p_joint 1.639344e-06

Joint ci ratio: 1.600331e+00	ci left: 5.305513e-07	ci right 3.813176e-06	k: 5	n:3060000
Cons ci ratio: 9.578587e-04	ci left: 8.451135e-01	ci right 8.459237e-01	k: 2587288	n:3060000
KS ci ratio: 1.385927e+00	ci left: 9.197270e-07	ci right 4.713287e-06	k: 7	n:3060000
TMEM90B   3060000 perm   3735 sec   (819 perm/sec)   p_kst 2.287582e-06   p_cons 8.455190e-01   p_joint 1.633987e-06

Joint ci ratio: 1.600331e+00	ci left: 5.288231e-07	ci right 3.800756e-06	k: 5	n:3070000
Cons ci ratio: 9.562571e-04	ci left: 8.451252e-01	ci right 8.459341e-01	k: 2595777	n:3070000
KS ci ratio: 1.385927e+00	ci left: 9.167311e-07	ci right 4.697934e-06	k: 7	n:3070000
TMEM90B   3070000 perm   3759 sec   (817 perm/sec)   p_kst 2.280130e-06   p_cons 8.455300e-01   p_joint 1.628664e-06

Joint ci ratio: 1.600331e+00	ci left: 5.271062e-07	ci right 3.788415e-06	k: 5	n:3080000
Cons ci ratio: 9.547797e-04	ci left: 8.451050e-01	ci right 8.459126e-01	k: 2604168	n:3080000
KS ci ratio: 1.385927e+00	ci left: 9.137547e-07	ci right 4.682681e-06	k: 7	n:3080000
TMEM90B   3080000 perm   3782 sec   (814 perm/sec)   p_kst 2.272727e-06   p_cons 8.455091e-01   p_joint 1.623377e-06

Joint ci ratio: 1.600331e+00	ci left: 5.254003e-07	ci right 3.776155e-06	k: 5	n:3090000
Cons ci ratio: 9.532218e-04	ci left: 8.451088e-01	ci right 8.459151e-01	k: 2612633	n:3090000
KS ci ratio: 1.385927e+00	ci left: 9.107976e-07	ci right 4.667527e-06	k: 7	n:3090000
TMEM90B   3090000 perm   3805 sec   (812 perm/sec)   p_kst 2.265372e-06   p_cons 8.455123e-01   p_joint 1.618123e-06

Joint ci ratio: 1.600331e+00	ci left: 5.237055e-07	ci right 3.763974e-06	k: 5	n:3100000
Cons ci ratio: 9.517550e-04	ci left: 8.450898e-01	ci right 8.458948e-01	k: 2621027	n:3100000
KS ci ratio: 1.385927e+00	ci left: 9.078595e-07	ci right 4.652470e-06	k: 7	n:3100000
TMEM90B   3100000 perm   3828 sec   (810 perm/sec)   p_kst 2.258065e-06   p_cons 8.454926e-01   p_joint 1.612903e-06

Joint ci ratio: 1.600331e+00	ci left: 5.220215e-07	ci right 3.751871e-06	k: 5	n:3110000
Cons ci ratio: 9.501919e-04	ci left: 8.450991e-01	ci right 8.459028e-01	k: 2629509	n:3110000
KS ci ratio: 1.385927e+00	ci left: 9.049404e-07	ci right 4.637511e-06	k: 7	n:3110000
TMEM90B   3110000 perm   3851 sec   (808 perm/sec)   p_kst 2.250804e-06   p_cons 8.455013e-01   p_joint 1.607717e-06

Joint ci ratio: 1.600332e+00	ci left: 5.203484e-07	ci right 3.739846e-06	k: 5	n:3120000
Cons ci ratio: 9.486656e-04	ci left: 8.451004e-01	ci right 8.459028e-01	k: 2637966	n:3120000
KS ci ratio: 1.385927e+00	ci left: 9.020399e-07	ci right 4.622647e-06	k: 7	n:3120000
TMEM90B   3120000 perm   3875 sec   (805 perm/sec)   p_kst 2.243590e-06   p_cons 8.455019e-01   p_joint 1.602564e-06

Joint ci ratio: 1.600332e+00	ci left: 5.186859e-07	ci right 3.727898e-06	k: 5	n:3130000
Cons ci ratio: 9.471328e-04	ci left: 8.451055e-01	ci right 8.459066e-01	k: 2646435	n:3130000
KS ci ratio: 1.385927e+00	ci left: 8.991580e-07	ci right 4.607878e-06	k: 7	n:3130000
TMEM90B   3130000 perm   3898 sec   (803 perm/sec)   p_kst 2.236422e-06   p_cons 8.455064e-01   p_joint 1.597444e-06

Joint ci ratio: 1.600332e+00	ci left: 5.170341e-07	ci right 3.716025e-06	k: 5	n:3140000
Cons ci ratio: 9.456108e-04	ci left: 8.451096e-01	ci right 8.459095e-01	k: 2654901	n:3140000
KS ci ratio: 1.385927e+00	ci left: 8.962944e-07	ci right 4.593203e-06	k: 7	n:3140000
TMEM90B   3140000 perm   3922 sec   (801 perm/sec)   p_kst 2.229299e-06   p_cons 8.455099e-01   p_joint 1.592357e-06

Joint ci ratio: 1.600332e+00	ci left: 5.153927e-07	ci right 3.704228e-06	k: 5	n:3150000
Cons ci ratio: 9.441271e-04	ci left: 8.451052e-01	ci right 8.459037e-01	k: 2663340	n:3150000
KS ci ratio: 1.385927e+00	ci left: 8.934490e-07	ci right 4.578622e-06	k: 7	n:3150000
TMEM90B   3150000 perm   3946 sec   (798 perm/sec)   p_kst 2.222222e-06   p_cons 8.455048e-01   p_joint 1.587302e-06

Joint ci ratio: 1.600332e+00	ci left: 5.137617e-07	ci right 3.692506e-06	k: 5	n:3160000
Cons ci ratio: 9.426892e-04	ci left: 8.450899e-01	ci right 8.458873e-01	k: 2671745	n:3160000
KS ci ratio: 1.385927e+00	ci left: 8.906217e-07	ci right 4.564132e-06	k: 7	n:3160000
TMEM90B   3160000 perm   3969 sec   (796 perm/sec)   p_kst 2.215190e-06   p_cons 8.454889e-01   p_joint 1.582278e-06

Joint ci ratio: 1.600332e+00	ci left: 5.121410e-07	ci right 3.680858e-06	k: 5	n:3170000
Cons ci ratio: 9.411544e-04	ci left: 8.451036e-01	ci right 8.458996e-01	k: 2680241	n:3170000
KS ci ratio: 1.385927e+00	ci left: 8.878121e-07	ci right 4.549735e-06	k: 7	n:3170000
TMEM90B   3170000 perm   3993 sec   (794 perm/sec)   p_kst 2.208202e-06   p_cons 8.455019e-01   p_joint 1.577287e-06

Joint ci ratio: 1.600332e+00	ci left: 5.105305e-07	ci right 3.669283e-06	k: 5	n:3180000
Cons ci ratio: 9.396599e-04	ci left: 8.451080e-01	ci right 8.459027e-01	k: 2688708	n:3180000
KS ci ratio: 1.385927e+00	ci left: 8.850203e-07	ci right 4.535427e-06	k: 7	n:3180000
TMEM90B   3180000 perm   4017 sec   (792 perm/sec)   p_kst 2.201258e-06   p_cons 8.455057e-01   p_joint 1.572327e-06

Joint ci ratio: 1.600332e+00	ci left: 5.089301e-07	ci right 3.657781e-06	k: 5	n:3190000
Cons ci ratio: 9.381725e-04	ci left: 8.451123e-01	ci right 8.459059e-01	k: 2697175	n:3190000
KS ci ratio: 1.385927e+00	ci left: 8.822459e-07	ci right 4.521210e-06	k: 7	n:3190000
TMEM90B   3190000 perm   4042 sec   (789 perm/sec)   p_kst 2.194357e-06   p_cons 8.455094e-01   p_joint 1.567398e-06

Joint ci ratio: 1.600332e+00	ci left: 5.073397e-07	ci right 3.646350e-06	k: 5	n:3200000
Cons ci ratio: 9.367425e-04	ci left: 8.451026e-01	ci right 8.458949e-01	k: 2705597	n:3200000
KS ci ratio: 1.385927e+00	ci left: 8.794889e-07	ci right 4.507081e-06	k: 7	n:3200000
TMEM90B   3200000 perm   4065 sec   (787 perm/sec)   p_kst 2.187500e-06   p_cons 8.454991e-01   p_joint 1.562500e-06

Joint ci ratio: 1.600332e+00	ci left: 5.057592e-07	ci right 3.634991e-06	k: 5	n:3210000
Cons ci ratio: 9.352376e-04	ci left: 8.451157e-01	ci right 8.459067e-01	k: 2714092	n:3210000
KS ci ratio: 1.385927e+00	ci left: 8.767490e-07	ci right 4.493040e-06	k: 7	n:3210000
TMEM90B   3210000 perm   4089 sec   (785 perm/sec)   p_kst 2.180685e-06   p_cons 8.455115e-01   p_joint 1.557632e-06

Joint ci ratio: 1.600332e+00	ci left: 5.041885e-07	ci right 3.623702e-06	k: 5	n:3220000
Cons ci ratio: 9.337600e-04	ci left: 8.451231e-01	ci right 8.459129e-01	k: 2722569	n:3220000
KS ci ratio: 1.385927e+00	ci left: 8.740262e-07	ci right 4.479087e-06	k: 7	n:3220000
TMEM90B   3220000 perm   4113 sec   (783 perm/sec)   p_kst 2.173913e-06   p_cons 8.455183e-01   p_joint 1.552795e-06

Joint ci ratio: 1.600332e+00	ci left: 5.026276e-07	ci right 3.612483e-06	k: 5	n:3230000
Cons ci ratio: 9.323545e-04	ci left: 8.451122e-01	ci right 8.459008e-01	k: 2730987	n:3230000
KS ci ratio: 1.385927e+00	ci left: 8.713203e-07	ci right 4.465219e-06	k: 7	n:3230000
TMEM90B   3230000 perm   4137 sec   (781 perm/sec)   p_kst 2.167183e-06   p_cons 8.455068e-01   p_joint 1.547988e-06

Joint ci ratio: 1.600332e+00	ci left: 5.010762e-07	ci right 3.601333e-06	k: 5	n:3240000
Cons ci ratio: 9.309322e-04	ci left: 8.451078e-01	ci right 8.458952e-01	k: 2739426	n:3240000
KS ci ratio: 1.385927e+00	ci left: 8.686310e-07	ci right 4.451438e-06	k: 7	n:3240000
TMEM90B   3240000 perm   4161 sec   (779 perm/sec)   p_kst 2.160494e-06   p_cons 8.455019e-01   p_joint 1.543210e-06

Joint ci ratio: 1.600332e+00	ci left: 4.995345e-07	ci right 3.590252e-06	k: 5	n:3250000
Cons ci ratio: 9.294344e-04	ci left: 8.451266e-01	ci right 8.459128e-01	k: 2747940	n:3250000
KS ci ratio: 1.385927e+00	ci left: 8.659583e-07	ci right 4.437741e-06	k: 7	n:3250000
TMEM90B   3250000 perm   4185 sec   (777 perm/sec)   p_kst 2.153846e-06   p_cons 8.455200e-01   p_joint 1.538462e-06

Joint ci ratio: 1.600332e+00	ci left: 4.980021e-07	ci right 3.579239e-06	k: 5	n:3260000
Cons ci ratio: 9.280309e-04	ci left: 8.451207e-01	ci right 8.459057e-01	k: 2756374	n:3260000
KS ci ratio: 1.385927e+00	ci left: 8.633020e-07	ci right 4.424129e-06	k: 7	n:3260000
TMEM90B   3260000 perm   4210 sec   (774 perm/sec)   p_kst 2.147239e-06   p_cons 8.455135e-01   p_joint 1.533742e-06

Joint ci ratio: 1.600332e+00	ci left: 4.964792e-07	ci right 3.568294e-06	k: 5	n:3270000
Cons ci ratio: 9.266077e-04	ci left: 8.451222e-01	ci right 8.459059e-01	k: 2764832	n:3270000
KS ci ratio: 1.385927e+00	ci left: 8.606619e-07	ci right 4.410599e-06	k: 7	n:3270000
TMEM90B   3270000 perm   4234 sec   (772 perm/sec)   p_kst 2.140673e-06   p_cons 8.455144e-01   p_joint 1.529052e-06

Joint ci ratio: 1.600332e+00	ci left: 4.949655e-07	ci right 3.557415e-06	k: 5	n:3280000
Cons ci ratio: 9.251867e-04	ci left: 8.451249e-01	ci right 8.459074e-01	k: 2773294	n:3280000
KS ci ratio: 1.385927e+00	ci left: 8.580379e-07	ci right 4.397152e-06	k: 7	n:3280000
TMEM90B   3280000 perm   4258 sec   (770 perm/sec)   p_kst 2.134146e-06   p_cons 8.455165e-01   p_joint 1.524390e-06

Joint ci ratio: 1.600332e+00	ci left: 4.934611e-07	ci right 3.546602e-06	k: 5	n:3290000
Cons ci ratio: 9.238044e-04	ci left: 8.451184e-01	ci right 8.458998e-01	k: 2781726	n:3290000
KS ci ratio: 1.385927e+00	ci left: 8.554299e-07	ci right 4.383787e-06	k: 7	n:3290000
TMEM90B   3290000 perm   4283 sec   (768 perm/sec)   p_kst 2.127660e-06   p_cons 8.455094e-01   p_joint 1.519757e-06

Joint ci ratio: 1.600332e+00	ci left: 4.919658e-07	ci right 3.535855e-06	k: 5	n:3300000
Cons ci ratio: 9.224241e-04	ci left: 8.451132e-01	ci right 8.458934e-01	k: 2790162	n:3300000
KS ci ratio: 1.385927e+00	ci left: 8.528377e-07	ci right 4.370503e-06	k: 7	n:3300000
TMEM90B   3300000 perm   4307 sec   (766 perm/sec)   p_kst 2.121212e-06   p_cons 8.455036e-01   p_joint 1.515152e-06

Joint ci ratio: 1.600332e+00	ci left: 4.904794e-07	ci right 3.525172e-06	k: 5	n:3310000
Cons ci ratio: 9.210329e-04	ci left: 8.451129e-01	ci right 8.458919e-01	k: 2798614	n:3310000
KS ci ratio: 1.385927e+00	ci left: 8.502612e-07	ci right 4.357299e-06	k: 7	n:3310000
TMEM90B   3310000 perm   4331 sec   (764 perm/sec)   p_kst 2.114804e-06   p_cons 8.455027e-01   p_joint 1.510574e-06

Joint ci ratio: 1.600332e+00	ci left: 4.890021e-07	ci right 3.514554e-06	k: 5	n:3320000
Cons ci ratio: 9.196278e-04	ci left: 8.451183e-01	ci right 8.458961e-01	k: 2807085	n:3320000
KS ci ratio: 1.385927e+00	ci left: 8.477001e-07	ci right 4.344174e-06	k: 7	n:3320000
TMEM90B   3320000 perm   4356 sec   (762 perm/sec)   p_kst 2.108434e-06   p_cons 8.455075e-01   p_joint 1.506024e-06

Joint ci ratio: 1.600332e+00	ci left: 4.875336e-07	ci right 3.504000e-06	k: 5	n:3330000
Cons ci ratio: 9.182281e-04	ci left: 8.451240e-01	ci right 8.459006e-01	k: 2815557	n:3330000
KS ci ratio: 1.385927e+00	ci left: 8.451545e-07	ci right 4.331129e-06	k: 7	n:3330000
TMEM90B   3330000 perm   4381 sec   (760 perm/sec)   p_kst 2.102102e-06   p_cons 8.455126e-01   p_joint 1.501502e-06

Joint ci ratio: 1.600332e+00	ci left: 4.860739e-07	ci right 3.493509e-06	k: 5	n:3340000
Cons ci ratio: 9.168736e-04	ci left: 8.451185e-01	ci right 8.458940e-01	k: 2823992	n:3340000
KS ci ratio: 1.385927e+00	ci left: 8.426241e-07	ci right 4.318161e-06	k: 7	n:3340000
TMEM90B   3340000 perm   4406 sec   (758 perm/sec)   p_kst 2.095808e-06   p_cons 8.455066e-01   p_joint 1.497006e-06

Joint ci ratio: 1.600332e+00	ci left: 4.846230e-07	ci right 3.483081e-06	k: 5	n:3350000
Cons ci ratio: 9.154738e-04	ci left: 8.451278e-01	ci right 8.459021e-01	k: 2832476	n:3350000
KS ci ratio: 1.385927e+00	ci left: 8.401088e-07	ci right 4.305271e-06	k: 7	n:3350000
TMEM90B   3350000 perm   4430 sec   (756 perm/sec)   p_kst 2.089552e-06   p_cons 8.455152e-01   p_joint 1.492537e-06

Joint ci ratio: 1.600332e+00	ci left: 4.831806e-07	ci right 3.472714e-06	k: 5	n:3360000
Cons ci ratio: 9.140576e-04	ci left: 8.451435e-01	ci right 8.459166e-01	k: 2840982	n:3360000
KS ci ratio: 1.385927e+00	ci left: 8.376084e-07	ci right 4.292458e-06	k: 7	n:3360000
TMEM90B   3360000 perm   4456 sec   (754 perm/sec)   p_kst 2.083333e-06   p_cons 8.455304e-01   p_joint 1.488095e-06

Joint ci ratio: 1.600332e+00	ci left: 4.817469e-07	ci right 3.462410e-06	k: 5	n:3370000
Cons ci ratio: 9.126385e-04	ci left: 8.451618e-01	ci right 8.459338e-01	k: 2849497	n:3370000
KS ci ratio: 1.385927e+00	ci left: 8.351230e-07	ci right 4.279721e-06	k: 7	n:3370000
TMEM90B   3370000 perm   4481 sec   (752 perm/sec)   p_kst 2.077151e-06   p_cons 8.455481e-01   p_joint 1.483680e-06

Joint ci ratio: 1.600332e+00	ci left: 4.803216e-07	ci right 3.452166e-06	k: 5	n:3380000
Cons ci ratio: 9.112952e-04	ci left: 8.451602e-01	ci right 8.459310e-01	k: 2857945	n:3380000
KS ci ratio: 1.385927e+00	ci left: 8.326522e-07	ci right 4.267059e-06	k: 7	n:3380000
TMEM90B   3380000 perm   4505 sec   (750 perm/sec)   p_kst 2.071006e-06   p_cons 8.455459e-01   p_joint 1.479290e-06

Joint ci ratio: 1.600332e+00	ci left: 4.789047e-07	ci right 3.441982e-06	k: 5	n:3390000
Cons ci ratio: 9.099947e-04	ci left: 8.451479e-01	ci right 8.459176e-01	k: 2866357	n:3390000
KS ci ratio: 1.385927e+00	ci left: 8.301960e-07	ci right 4.254472e-06	k: 7	n:3390000
TMEM90B   3390000 perm   4530 sec   (748 perm/sec)   p_kst 2.064897e-06   p_cons 8.455330e-01   p_joint 1.474926e-06

Joint ci ratio: 1.600332e+00	ci left: 4.774962e-07	ci right 3.431859e-06	k: 5	n:3400000
Cons ci ratio: 9.086599e-04	ci left: 8.451472e-01	ci right 8.459158e-01	k: 2874808	n:3400000
KS ci ratio: 1.385927e+00	ci left: 8.277542e-07	ci right 4.241959e-06	k: 7	n:3400000
TMEM90B   3400000 perm   4556 sec   (746 perm/sec)   p_kst 2.058824e-06   p_cons 8.455318e-01   p_joint 1.470588e-06

Joint ci ratio: 1.600332e+00	ci left: 4.760959e-07	ci right 3.421795e-06	k: 5	n:3410000
Cons ci ratio: 9.073860e-04	ci left: 8.451306e-01	ci right 8.458981e-01	k: 2883205	n:3410000
KS ci ratio: 1.385927e+00	ci left: 8.253268e-07	ci right 4.229519e-06	k: 7	n:3410000
TMEM90B   3410000 perm   4582 sec   (744 perm/sec)   p_kst 2.052786e-06   p_cons 8.455147e-01   p_joint 1.466276e-06

Joint ci ratio: 1.600332e+00	ci left: 4.747038e-07	ci right 3.411790e-06	k: 5	n:3420000
Cons ci ratio: 9.059998e-04	ci left: 8.451481e-01	ci right 8.459145e-01	k: 2891718	n:3420000
KS ci ratio: 1.385927e+00	ci left: 8.229136e-07	ci right 4.217152e-06	k: 7	n:3420000
TMEM90B   3420000 perm   4607 sec   (742 perm/sec)   p_kst 2.046784e-06   p_cons 8.455316e-01   p_joint 1.461988e-06

Joint ci ratio: 1.600332e+00	ci left: 4.733198e-07	ci right 3.401843e-06	k: 5	n:3430000
Cons ci ratio: 9.046855e-04	ci left: 8.451465e-01	ci right 8.459118e-01	k: 2900166	n:3430000
KS ci ratio: 1.385927e+00	ci left: 8.205144e-07	ci right 4.204857e-06	k: 7	n:3430000
TMEM90B   3430000 perm   4633 sec   (740 perm/sec)   p_kst 2.040816e-06   p_cons 8.455294e-01   p_joint 1.457726e-06

Joint ci ratio: 1.600332e+00	ci left: 4.719439e-07	ci right 3.391954e-06	k: 5	n:3440000
Cons ci ratio: 9.034001e-04	ci left: 8.451383e-01	ci right 8.459024e-01	k: 2908591	n:3440000
KS ci ratio: 1.385927e+00	ci left: 8.181292e-07	ci right 4.192634e-06	k: 7	n:3440000
TMEM90B   3440000 perm   4659 sec   (738 perm/sec)   p_kst 2.034884e-06   p_cons 8.455206e-01   p_joint 1.453488e-06

Joint ci ratio: 1.600332e+00	ci left: 4.705759e-07	ci right 3.382122e-06	k: 5	n:3450000
Cons ci ratio: 9.021821e-04	ci left: 8.451121e-01	ci right 8.458752e-01	k: 2916954	n:3450000
KS ci ratio: 1.385927e+00	ci left: 8.157578e-07	ci right 4.180481e-06	k: 7	n:3450000
TMEM90B   3450000 perm   4685 sec   (736 perm/sec)   p_kst 2.028986e-06   p_cons 8.454939e-01   p_joint 1.449275e-06

Joint ci ratio: 1.600332e+00	ci left: 4.692159e-07	ci right 3.372347e-06	k: 5	n:3460000
Cons ci ratio: 9.009302e-04	ci left: 8.450973e-01	ci right 8.458593e-01	k: 2925356	n:3460000
KS ci ratio: 1.385927e+00	ci left: 8.134001e-07	ci right 4.168399e-06	k: 7	n:3460000
TMEM90B   3460000 perm   4711 sec   (734 perm/sec)   p_kst 2.023121e-06   p_cons 8.454786e-01   p_joint 1.445087e-06

Joint ci ratio: 1.600332e+00	ci left: 4.678637e-07	ci right 3.362628e-06	k: 5	n:3470000
Cons ci ratio: 8.996577e-04	ci left: 8.450902e-01	ci right 8.458511e-01	k: 2933784	n:3470000
KS ci ratio: 1.385927e+00	ci left: 8.110560e-07	ci right 4.156386e-06	k: 7	n:3470000
TMEM90B   3470000 perm   4737 sec   (733 perm/sec)   p_kst 2.017291e-06   p_cons 8.454709e-01   p_joint 1.440922e-06

Joint ci ratio: 1.600332e+00	ci left: 4.665192e-07	ci right 3.352966e-06	k: 5	n:3480000
Cons ci ratio: 8.983787e-04	ci left: 8.450865e-01	ci right 8.458463e-01	k: 2942224	n:3480000
KS ci ratio: 1.385927e+00	ci left: 8.087254e-07	ci right 4.144443e-06	k: 7	n:3480000
TMEM90B   3480000 perm   4763 sec   (731 perm/sec)   p_kst 2.011494e-06   p_cons 8.454667e-01   p_joint 1.436782e-06

Joint ci ratio: 1.600332e+00	ci left: 4.651825e-07	ci right 3.343358e-06	k: 5	n:3490000
Cons ci ratio: 8.970894e-04	ci left: 8.450874e-01	ci right 8.458461e-01	k: 2950680	n:3490000
KS ci ratio: 1.385928e+00	ci left: 8.064081e-07	ci right 4.132567e-06	k: 7	n:3490000
TMEM90B   3490000 perm   4789 sec   (729 perm/sec)   p_kst 2.005731e-06   p_cons 8.454670e-01   p_joint 1.432665e-06

Joint ci ratio: 1.600332e+00	ci left: 4.638534e-07	ci right 3.333806e-06	k: 5	n:3500000
Cons ci ratio: 8.958604e-04	ci left: 8.450723e-01	ci right 8.458300e-01	k: 2959080	n:3500000
KS ci ratio: 1.385928e+00	ci left: 8.041041e-07	ci right 4.120760e-06	k: 7	n:3500000
TMEM90B   3500000 perm   4815 sec   (727 perm/sec)   p_kst 2.000000e-06   p_cons 8.454514e-01   p_joint 1.428571e-06

Joint ci ratio: 1.600332e+00	ci left: 4.625319e-07	ci right 3.324308e-06	k: 5	n:3510000
Cons ci ratio: 8.945507e-04	ci left: 8.450824e-01	ci right 8.458390e-01	k: 2967568	n:3510000
KS ci ratio: 1.385928e+00	ci left: 8.018132e-07	ci right 4.109020e-06	k: 7	n:3510000
TMEM90B   3510000 perm   4841 sec   (725 perm/sec)   p_kst 1.994302e-06   p_cons 8.454610e-01   p_joint 1.424501e-06

Joint ci ratio: 1.600332e+00	ci left: 4.612179e-07	ci right 3.314864e-06	k: 5	n:3520000
Cons ci ratio: 8.932700e-04	ci left: 8.450856e-01	ci right 8.458411e-01	k: 2976032	n:3520000
KS ci ratio: 1.385928e+00	ci left: 7.995353e-07	ci right 4.097347e-06	k: 7	n:3520000
TMEM90B   3520000 perm   4868 sec   (723 perm/sec)   p_kst 1.988636e-06   p_cons 8.454636e-01   p_joint 1.420455e-06

Joint ci ratio: 1.600332e+00	ci left: 4.599113e-07	ci right 3.305473e-06	k: 5	n:3530000
Cons ci ratio: 8.920170e-04	ci left: 8.450823e-01	ci right 8.458367e-01	k: 2984473	n:3530000
KS ci ratio: 1.385928e+00	ci left: 7.972703e-07	ci right 4.085739e-06	k: 7	n:3530000
TMEM90B   3530000 perm   4894 sec   (721 perm/sec)   p_kst 1.983003e-06   p_cons 8.454598e-01   p_joint 1.416431e-06

Joint ci ratio: 1.600332e+00	ci left: 4.586121e-07	ci right 3.296136e-06	k: 5	n:3540000
Cons ci ratio: 8.907607e-04	ci left: 8.450815e-01	ci right 8.458349e-01	k: 2992923	n:3540000
KS ci ratio: 1.385928e+00	ci left: 7.950182e-07	ci right 4.074198e-06	k: 7	n:3540000
TMEM90B   3540000 perm   4920 sec   (719 perm/sec)   p_kst 1.977401e-06   p_cons 8.454585e-01   p_joint 1.412429e-06

Joint ci ratio: 1.600332e+00	ci left: 4.573203e-07	ci right 3.286851e-06	k: 5	n:3550000
Cons ci ratio: 8.895000e-04	ci left: 8.450836e-01	ci right 8.458359e-01	k: 3001383	n:3550000
KS ci ratio: 1.385928e+00	ci left: 7.927787e-07	ci right 4.062721e-06	k: 7	n:3550000
TMEM90B   3550000 perm   4947 sec   (718 perm/sec)   p_kst 1.971831e-06   p_cons 8.454600e-01   p_joint 1.408451e-06

Joint ci ratio: 1.600332e+00	ci left: 4.560357e-07	ci right 3.277618e-06	k: 5	n:3560000
Cons ci ratio: 8.882619e-04	ci left: 8.450806e-01	ci right 8.458318e-01	k: 3009825	n:3560000
KS ci ratio: 1.385928e+00	ci left: 7.905518e-07	ci right 4.051309e-06	k: 7	n:3560000
TMEM90B   3560000 perm   4973 sec   (716 perm/sec)   p_kst 1.966292e-06   p_cons 8.454565e-01   p_joint 1.404494e-06

Joint ci ratio: 1.600332e+00	ci left: 4.547582e-07	ci right 3.268437e-06	k: 5	n:3570000
Cons ci ratio: 8.869509e-04	ci left: 8.451005e-01	ci right 8.458507e-01	k: 3018349	n:3570000
KS ci ratio: 1.385928e+00	ci left: 7.883373e-07	ci right 4.039961e-06	k: 7	n:3570000
TMEM90B   3570000 perm   5000 sec   (714 perm/sec)   p_kst 1.960784e-06   p_cons 8.454759e-01   p_joint 1.400560e-06

Joint ci ratio: 1.600332e+00	ci left: 4.534880e-07	ci right 3.259308e-06	k: 5	n:3580000
Cons ci ratio: 8.857035e-04	ci left: 8.451034e-01	ci right 8.458525e-01	k: 3026812	n:3580000
KS ci ratio: 1.385928e+00	ci left: 7.861353e-07	ci right 4.028676e-06	k: 7	n:3580000
TMEM90B   3580000 perm   5027 sec   (712 perm/sec)   p_kst 1.955307e-06   p_cons 8.454782e-01   p_joint 1.396648e-06

Joint ci ratio: 1.600332e+00	ci left: 4.522248e-07	ci right 3.250229e-06	k: 5	n:3590000
Cons ci ratio: 8.844698e-04	ci left: 8.451037e-01	ci right 8.458517e-01	k: 3035266	n:3590000
KS ci ratio: 1.385928e+00	ci left: 7.839455e-07	ci right 4.017454e-06	k: 7	n:3590000
TMEM90B   3590000 perm   5053 sec   (710 perm/sec)   p_kst 1.949861e-06   p_cons 8.454780e-01   p_joint 1.392758e-06

Joint ci ratio: 1.600332e+00	ci left: 4.509686e-07	ci right 3.241200e-06	k: 5	n:3600000
Cons ci ratio: 8.831821e-04	ci left: 8.451215e-01	ci right 8.458685e-01	k: 3043783	n:3600000
KS ci ratio: 1.385928e+00	ci left: 7.817679e-07	ci right 4.006295e-06	k: 7	n:3600000
TMEM90B   3600000 perm   5080 sec   (709 perm/sec)   p_kst 1.944444e-06   p_cons 8.454953e-01   p_joint 1.388889e-06

Joint ci ratio: 1.600332e+00	ci left: 4.497194e-07	ci right 3.232222e-06	k: 5	n:3610000
Cons ci ratio: 8.819804e-04	ci left: 8.451154e-01	ci right 8.458613e-01	k: 3052214	n:3610000
KS ci ratio: 1.385928e+00	ci left: 7.796023e-07	ci right 3.995197e-06	k: 7	n:3610000
TMEM90B   3610000 perm   5107 sec   (707 perm/sec)   p_kst 1.939058e-06   p_cons 8.454886e-01   p_joint 1.385042e-06

Joint ci ratio: 1.600332e+00	ci left: 4.484771e-07	ci right 3.223293e-06	k: 5	n:3620000
Cons ci ratio: 8.807193e-04	ci left: 8.451284e-01	ci right 8.458733e-01	k: 3060714	n:3620000
KS ci ratio: 1.385928e+00	ci left: 7.774487e-07	ci right 3.984160e-06	k: 7	n:3620000
TMEM90B   3620000 perm   5133 sec   (705 perm/sec)   p_kst 1.933702e-06   p_cons 8.455011e-01   p_joint 1.381215e-06

Joint ci ratio: 1.600332e+00	ci left: 4.472416e-07	ci right 3.214414e-06	k: 5	n:3630000
Cons ci ratio: 8.795406e-04	ci left: 8.451184e-01	ci right 8.458623e-01	k: 3069131	n:3630000
KS ci ratio: 1.385928e+00	ci left: 7.753070e-07	ci right 3.973185e-06	k: 7	n:3630000
TMEM90B   3630000 perm   5160 sec   (703 perm/sec)   p_kst 1.928375e-06   p_cons 8.454906e-01   p_joint 1.377410e-06

Joint ci ratio: 1.600332e+00	ci left: 4.460129e-07	ci right 3.205583e-06	k: 5	n:3640000
Cons ci ratio: 8.783537e-04	ci left: 8.451123e-01	ci right 8.458552e-01	k: 3077562	n:3640000
KS ci ratio: 1.385928e+00	ci left: 7.731770e-07	ci right 3.962269e-06	k: 7	n:3640000
TMEM90B   3640000 perm   5187 sec   (702 perm/sec)   p_kst 1.923077e-06   p_cons 8.454841e-01   p_joint 1.373626e-06

Joint ci ratio: 1.600332e+00	ci left: 4.447909e-07	ci right 3.196800e-06	k: 5	n:3650000
Cons ci ratio: 8.771817e-04	ci left: 8.451033e-01	ci right 8.458452e-01	k: 3085982	n:3650000
KS ci ratio: 1.385928e+00	ci left: 7.710587e-07	ci right 3.951414e-06	k: 7	n:3650000
TMEM90B   3650000 perm   5214 sec   (700 perm/sec)   p_kst 1.917808e-06   p_cons 8.454745e-01   p_joint 1.369863e-06

Joint ci ratio: 1.600332e+00	ci left: 4.435757e-07	ci right 3.188066e-06	k: 5	n:3660000
Cons ci ratio: 8.759960e-04	ci left: 8.450998e-01	ci right 8.458407e-01	k: 3094422	n:3660000
KS ci ratio: 1.385928e+00	ci left: 7.689520e-07	ci right 3.940618e-06	k: 7	n:3660000
TMEM90B   3660000 perm   5241 sec   (698 perm/sec)   p_kst 1.912568e-06   p_cons 8.454705e-01   p_joint 1.366120e-06

Joint ci ratio: 1.600332e+00	ci left: 4.423670e-07	ci right 3.179379e-06	k: 5	n:3670000
Cons ci ratio: 8.747577e-04	ci left: 8.451135e-01	ci right 8.458533e-01	k: 3102925	n:3670000
KS ci ratio: 1.385928e+00	ci left: 7.668568e-07	ci right 3.929880e-06	k: 7	n:3670000
TMEM90B   3670000 perm   5269 sec   (697 perm/sec)   p_kst 1.907357e-06   p_cons 8.454837e-01   p_joint 1.362398e-06

Joint ci ratio: 1.600332e+00	ci left: 4.411649e-07	ci right 3.170740e-06	k: 5	n:3680000
Cons ci ratio: 8.735700e-04	ci left: 8.451135e-01	ci right 8.458523e-01	k: 3111378	n:3680000
KS ci ratio: 1.385928e+00	ci left: 7.647729e-07	ci right 3.919201e-06	k: 7	n:3680000
TMEM90B   3680000 perm   5296 sec   (695 perm/sec)   p_kst 1.902174e-06   p_cons 8.454832e-01   p_joint 1.358696e-06

Joint ci ratio: 1.600332e+00	ci left: 4.399694e-07	ci right 3.162147e-06	k: 5	n:3690000
Cons ci ratio: 8.723827e-04	ci left: 8.451148e-01	ci right 8.458527e-01	k: 3119836	n:3690000
KS ci ratio: 1.385928e+00	ci left: 7.627003e-07	ci right 3.908580e-06	k: 7	n:3690000
TMEM90B   3690000 perm   5324 sec   (693 perm/sec)   p_kst 1.897019e-06   p_cons 8.454840e-01   p_joint 1.355014e-06

Joint ci ratio: 1.600332e+00	ci left: 4.387802e-07	ci right 3.153600e-06	k: 5	n:3700000
Cons ci ratio: 8.712137e-04	ci left: 8.451121e-01	ci right 8.458490e-01	k: 3128279	n:3700000
KS ci ratio: 1.385928e+00	ci left: 7.606390e-07	ci right 3.898016e-06	k: 7	n:3700000
TMEM90B   3700000 perm   5351 sec   (691 perm/sec)   p_kst 1.891892e-06   p_cons 8.454808e-01   p_joint 1.351351e-06

Joint ci ratio: 1.600332e+00	ci left: 4.375975e-07	ci right 3.145100e-06	k: 5	n:3710000
Cons ci ratio: 8.700439e-04	ci left: 8.451110e-01	ci right 8.458469e-01	k: 3136728	n:3710000
KS ci ratio: 1.385928e+00	ci left: 7.585887e-07	ci right 3.887510e-06	k: 7	n:3710000
TMEM90B   3710000 perm   5379 sec   (690 perm/sec)   p_kst 1.886792e-06   p_cons 8.454792e-01   p_joint 1.347709e-06

Joint ci ratio: 1.600332e+00	ci left: 4.364212e-07	ci right 3.136646e-06	k: 5	n:3720000
Cons ci ratio: 8.688735e-04	ci left: 8.451116e-01	ci right 8.458465e-01	k: 3145183	n:3720000
KS ci ratio: 1.385928e+00	ci left: 7.565495e-07	ci right 3.877059e-06	k: 7	n:3720000
TMEM90B   3720000 perm   5407 sec   (688 perm/sec)   p_kst 1.881720e-06   p_cons 8.454793e-01   p_joint 1.344086e-06

Joint ci ratio: 1.600332e+00	ci left: 4.352512e-07	ci right 3.128236e-06	k: 5	n:3730000
Cons ci ratio: 8.676901e-04	ci left: 8.451175e-01	ci right 8.458514e-01	k: 3153658	n:3730000
KS ci ratio: 1.385928e+00	ci left: 7.545212e-07	ci right 3.866665e-06	k: 7	n:3730000
TMEM90B   3730000 perm   5434 sec   (686 perm/sec)   p_kst 1.876676e-06   p_cons 8.454847e-01   p_joint 1.340483e-06

Joint ci ratio: 1.600332e+00	ci left: 4.340874e-07	ci right 3.119872e-06	k: 5	n:3740000
Cons ci ratio: 8.665584e-04	ci left: 8.451092e-01	ci right 8.458421e-01	k: 3162080	n:3740000
KS ci ratio: 1.385928e+00	ci left: 7.525038e-07	ci right 3.856326e-06	k: 7	n:3740000
TMEM90B   3740000 perm   5462 sec   (685 perm/sec)   p_kst 1.871658e-06   p_cons 8.454759e-01   p_joint 1.336898e-06

Joint ci ratio: 1.600332e+00	ci left: 4.329298e-07	ci right 3.111552e-06	k: 5	n:3750000
Cons ci ratio: 8.654055e-04	ci left: 8.451087e-01	ci right 8.458406e-01	k: 3170531	n:3750000
KS ci ratio: 1.385928e+00	ci left: 7.504971e-07	ci right 3.846043e-06	k: 7	n:3750000
TMEM90B   3750000 perm   5490 sec   (683 perm/sec)   p_kst 1.866667e-06   p_cons 8.454749e-01   p_joint 1.333333e-06

Joint ci ratio: 1.600332e+00	ci left: 4.317784e-07	ci right 3.103277e-06	k: 5	n:3760000
Cons ci ratio: 8.642476e-04	ci left: 8.451111e-01	ci right 8.458421e-01	k: 3178993	n:3760000
KS ci ratio: 1.385928e+00	ci left: 7.485011e-07	ci right 3.835814e-06	k: 7	n:3760000
TMEM90B   3760000 perm   5518 sec   (681 perm/sec)   p_kst 1.861702e-06   p_cons 8.454769e-01   p_joint 1.329787e-06

Joint ci ratio: 1.600332e+00	ci left: 4.306331e-07	ci right 3.095046e-06	k: 5	n:3770000
Cons ci ratio: 8.630829e-04	ci left: 8.451170e-01	ci right 8.458469e-01	k: 3187468	n:3770000
KS ci ratio: 1.385928e+00	ci left: 7.465157e-07	ci right 3.825640e-06	k: 7	n:3770000
TMEM90B   3770000 perm   5546 sec   (680 perm/sec)   p_kst 1.856764e-06   p_cons 8.454822e-01   p_joint 1.326260e-06

Joint ci ratio: 1.600332e+00	ci left: 4.294939e-07	ci right 3.086858e-06	k: 5	n:3780000
Cons ci ratio: 8.619874e-04	ci left: 8.451032e-01	ci right 8.458322e-01	k: 3195869	n:3780000
KS ci ratio: 1.385928e+00	ci left: 7.445408e-07	ci right 3.815519e-06	k: 7	n:3780000
TMEM90B   3780000 perm   5574 sec   (678 perm/sec)   p_kst 1.851852e-06   p_cons 8.454680e-01   p_joint 1.322751e-06

Joint ci ratio: 1.600332e+00	ci left: 4.283607e-07	ci right 3.078713e-06	k: 5	n:3790000
Cons ci ratio: 8.608727e-04	ci left: 8.450966e-01	ci right 8.458247e-01	k: 3204297	n:3790000
KS ci ratio: 1.385928e+00	ci left: 7.425763e-07	ci right 3.805452e-06	k: 7	n:3790000
TMEM90B   3790000 perm   5602 sec   (677 perm/sec)   p_kst 1.846966e-06   p_cons 8.454609e-01   p_joint 1.319261e-06

Joint ci ratio: 1.600332e+00	ci left: 4.272334e-07	ci right 3.070611e-06	k: 5	n:3800000
Cons ci ratio: 8.597224e-04	ci left: 8.451022e-01	ci right 8.458293e-01	k: 3212771	n:3800000
KS ci ratio: 1.385928e+00	ci left: 7.406222e-07	ci right 3.795437e-06	k: 7	n:3800000
TMEM90B   3800000 perm   5631 sec   (675 perm/sec)   p_kst 1.842105e-06   p_cons 8.454661e-01   p_joint 1.315789e-06

Joint ci ratio: 1.600332e+00	ci left: 4.261120e-07	ci right 3.062552e-06	k: 5	n:3810000
Cons ci ratio: 8.585690e-04	ci left: 8.451102e-01	ci right 8.458363e-01	k: 3221254	n:3810000
KS ci ratio: 1.385928e+00	ci left: 7.386783e-07	ci right 3.785475e-06	k: 7	n:3810000
TMEM90B   3810000 perm   5659 sec   (673 perm/sec)   p_kst 1.837270e-06   p_cons 8.454735e-01   p_joint 1.312336e-06

Joint ci ratio: 1.600332e+00	ci left: 4.249966e-07	ci right 3.054535e-06	k: 5	n:3820000
Cons ci ratio: 8.573996e-04	ci left: 8.451243e-01	ci right 8.458495e-01	k: 3229761	n:3820000
KS ci ratio: 1.385928e+00	ci left: 7.367446e-07	ci right 3.775566e-06	k: 7	n:3820000
TMEM90B   3820000 perm   5687 sec   (672 perm/sec)   p_kst 1.832461e-06   p_cons 8.454872e-01   p_joint 1.308901e-06

Joint ci ratio: 1.600332e+00	ci left: 4.238869e-07	ci right 3.046559e-06	k: 5	n:3830000
Cons ci ratio: 8.562315e-04	ci left: 8.451395e-01	ci right 8.458637e-01	k: 3238272	n:3830000
KS ci ratio: 1.385928e+00	ci left: 7.348209e-07	ci right 3.765708e-06	k: 7	n:3830000
TMEM90B   3830000 perm   5716 sec   (670 perm/sec)   p_kst 1.827676e-06   p_cons 8.455018e-01   p_joint 1.305483e-06

Joint ci ratio: 1.600332e+00	ci left: 4.227830e-07	ci right 3.038626e-06	k: 5	n:3840000
Cons ci ratio: 8.550810e-04	ci left: 8.451506e-01	ci right 8.458739e-01	k: 3246768	n:3840000
KS ci ratio: 1.385928e+00	ci left: 7.329073e-07	ci right 3.755901e-06	k: 7	n:3840000
TMEM90B   3840000 perm   5745 sec   (668 perm/sec)   p_kst 1.822917e-06   p_cons 8.455125e-01   p_joint 1.302083e-06

Joint ci ratio: 1.600332e+00	ci left: 4.216849e-07	ci right 3.030733e-06	k: 5	n:3850000
Cons ci ratio: 8.539724e-04	ci left: 8.451503e-01	ci right 8.458726e-01	k: 3255220	n:3850000
KS ci ratio: 1.385928e+00	ci left: 7.310037e-07	ci right 3.746146e-06	k: 7	n:3850000
TMEM90B   3850000 perm   5774 sec   (667 perm/sec)   p_kst 1.818182e-06   p_cons 8.455117e-01   p_joint 1.298701e-06

Joint ci ratio: 1.600332e+00	ci left: 4.205925e-07	ci right 3.022881e-06	k: 5	n:3860000
Cons ci ratio: 8.529197e-04	ci left: 8.451341e-01	ci right 8.458555e-01	k: 3263611	n:3860000
KS ci ratio: 1.385928e+00	ci left: 7.291099e-07	ci right 3.736441e-06	k: 7	n:3860000
TMEM90B   3860000 perm   5801 sec   (665 perm/sec)   p_kst 1.813472e-06   p_cons 8.454951e-01   p_joint 1.295337e-06

Joint ci ratio: 1.600332e+00	ci left: 4.195057e-07	ci right 3.015070e-06	k: 5	n:3870000
Cons ci ratio: 8.518094e-04	ci left: 8.451369e-01	ci right 8.458574e-01	k: 3272075	n:3870000
KS ci ratio: 1.385928e+00	ci left: 7.272259e-07	ci right 3.726786e-06	k: 7	n:3870000
TMEM90B   3870000 perm   5830 sec   (664 perm/sec)   p_kst 1.808786e-06   p_cons 8.454974e-01   p_joint 1.291990e-06

Joint ci ratio: 1.600332e+00	ci left: 4.184245e-07	ci right 3.007300e-06	k: 5	n:3880000
Cons ci ratio: 8.506942e-04	ci left: 8.451426e-01	ci right 8.458621e-01	k: 3280550	n:3880000
KS ci ratio: 1.385928e+00	ci left: 7.253516e-07	ci right 3.717181e-06	k: 7	n:3880000
TMEM90B   3880000 perm   5858 sec   (662 perm/sec)   p_kst 1.804124e-06   p_cons 8.455026e-01   p_joint 1.288660e-06

Joint ci ratio: 1.600332e+00	ci left: 4.173488e-07	ci right 2.999569e-06	k: 5	n:3890000
Cons ci ratio: 8.495943e-04	ci left: 8.451448e-01	ci right 8.458634e-01	k: 3289012	n:3890000
KS ci ratio: 1.385928e+00	ci left: 7.234869e-07	ci right 3.707625e-06	k: 7	n:3890000
TMEM90B   3890000 perm   5887 sec   (661 perm/sec)   p_kst 1.799486e-06   p_cons 8.455044e-01   p_joint 1.285347e-06

Joint ci ratio: 1.600332e+00	ci left: 4.162787e-07	ci right 2.991877e-06	k: 5	n:3900000
Cons ci ratio: 8.485110e-04	ci left: 8.451432e-01	ci right 8.458609e-01	k: 3297459	n:3900000
KS ci ratio: 1.385928e+00	ci left: 7.216318e-07	ci right 3.698118e-06	k: 7	n:3900000
TMEM90B   3900000 perm   5916 sec   (659 perm/sec)   p_kst 1.794872e-06   p_cons 8.455023e-01   p_joint 1.282051e-06

Joint ci ratio: 1.600332e+00	ci left: 4.152140e-07	ci right 2.984226e-06	k: 5	n:3910000
Cons ci ratio: 8.473705e-04	ci left: 8.451606e-01	ci right 8.458773e-01	k: 3305980	n:3910000
KS ci ratio: 1.385928e+00	ci left: 7.197862e-07	ci right 3.688660e-06	k: 7	n:3910000
TMEM90B   3910000 perm   5945 sec   (658 perm/sec)   p_kst 1.790281e-06   p_cons 8.455192e-01   p_joint 1.278772e-06

Joint ci ratio: 1.600332e+00	ci left: 4.141548e-07	ci right 2.976613e-06	k: 5	n:3920000
Cons ci ratio: 8.462817e-04	ci left: 8.451633e-01	ci right 8.458791e-01	k: 3314444	n:3920000
KS ci ratio: 1.385928e+00	ci left: 7.179501e-07	ci right 3.679250e-06	k: 7	n:3920000
TMEM90B   3920000 perm   5974 sec   (656 perm/sec)   p_kst 1.785714e-06   p_cons 8.455214e-01   p_joint 1.275510e-06

Joint ci ratio: 1.600332e+00	ci left: 4.131010e-07	ci right 2.969039e-06	k: 5	n:3930000
Cons ci ratio: 8.451733e-04	ci left: 8.451734e-01	ci right 8.458882e-01	k: 3322937	n:3930000
KS ci ratio: 1.385928e+00	ci left: 7.161232e-07	ci right 3.669888e-06	k: 7	n:3930000
TMEM90B   3930000 perm   6004 sec   (655 perm/sec)   p_kst 1.781170e-06   p_cons 8.455310e-01   p_joint 1.272265e-06

Joint ci ratio: 1.481619e+00	ci left: 5.588566e-07	ci right 3.314584e-06	k: 6	n:3940000
Cons ci ratio: 8.440839e-04	ci left: 8.451788e-01	ci right 8.458928e-01	k: 3331412	n:3940000
KS ci ratio: 1.306665e+00	ci left: 8.766075e-07	ci right 4.000806e-06	k: 8	n:3940000
TMEM90B   3940000 perm   6033 sec   (653 perm/sec)   p_kst 2.030457e-06   p_cons 8.455360e-01   p_joint 1.522843e-06

Joint ci ratio: 1.481619e+00	ci left: 5.574418e-07	ci right 3.306193e-06	k: 6	n:3950000
Cons ci ratio: 8.429848e-04	ci left: 8.451886e-01	ci right 8.459016e-01	k: 3339904	n:3950000
KS ci ratio: 1.306665e+00	ci left: 8.743883e-07	ci right 3.990677e-06	k: 8	n:3950000
TMEM90B   3950000 perm   6062 sec   (652 perm/sec)   p_kst 2.025316e-06   p_cons 8.455453e-01   p_joint 1.518987e-06

Joint ci ratio: 1.481619e+00	ci left: 5.560341e-07	ci right 3.297844e-06	k: 6	n:3960000
Cons ci ratio: 8.418786e-04	ci left: 8.452018e-01	ci right 8.459139e-01	k: 3348410	n:3960000
KS ci ratio: 1.306665e+00	ci left: 8.721802e-07	ci right 3.980599e-06	k: 8	n:3960000
TMEM90B   3960000 perm   6092 sec   (650 perm/sec)   p_kst 2.020202e-06   p_cons 8.455581e-01   p_joint 1.515152e-06

Joint ci ratio: 1.481619e+00	ci left: 5.546335e-07	ci right 3.289537e-06	k: 6	n:3970000
Cons ci ratio: 8.407922e-04	ci left: 8.452102e-01	ci right 8.459213e-01	k: 3356897	n:3970000
KS ci ratio: 1.306665e+00	ci left: 8.699833e-07	ci right 3.970573e-06	k: 8	n:3970000
TMEM90B   3970000 perm   6122 sec   (649 perm/sec)   p_kst 2.015113e-06   p_cons 8.455660e-01   p_joint 1.511335e-06

Joint ci ratio: 1.481619e+00	ci left: 5.532400e-07	ci right 3.281272e-06	k: 6	n:3980000
Cons ci ratio: 8.396727e-04	ci left: 8.452300e-01	ci right 8.459403e-01	k: 3365430	n:3980000
KS ci ratio: 1.306665e+00	ci left: 8.677974e-07	ci right 3.960596e-06	k: 8	n:3980000
TMEM90B   3980000 perm   6151 sec   (647 perm/sec)   p_kst 2.010050e-06   p_cons 8.455854e-01   p_joint 1.507538e-06

Joint ci ratio: 1.481619e+00	ci left: 5.518534e-07	ci right 3.273048e-06	k: 6	n:3990000
Cons ci ratio: 8.386286e-04	ci left: 8.452278e-01	ci right 8.459371e-01	k: 3373875	n:3990000
KS ci ratio: 1.306665e+00	ci left: 8.656225e-07	ci right 3.950670e-06	k: 8	n:3990000
TMEM90B   3990000 perm   6181 sec   (646 perm/sec)   p_kst 2.005013e-06   p_cons 8.455827e-01   p_joint 1.503759e-06

Joint ci ratio: 1.481619e+00	ci left: 5.504738e-07	ci right 3.264866e-06	k: 6	n:4000000
Cons ci ratio: 8.375739e-04	ci left: 8.452300e-01	ci right 8.459385e-01	k: 3382338	n:4000000
KS ci ratio: 1.306665e+00	ci left: 8.634584e-07	ci right 3.940793e-06	k: 8	n:4000000
TMEM90B   4000000 perm   6210 sec   (644 perm/sec)   p_kst 2.000000e-06   p_cons 8.455845e-01   p_joint 1.500000e-06

Joint ci ratio: 1.481619e+00	ci left: 5.491010e-07	ci right 3.256724e-06	k: 6	n:4010000
Cons ci ratio: 8.364712e-04	ci left: 8.452485e-01	ci right 8.459560e-01	k: 3390866	n:4010000
KS ci ratio: 1.306665e+00	ci left: 8.613052e-07	ci right 3.930966e-06	k: 8	n:4010000
TMEM90B   4010000 perm   6240 sec   (643 perm/sec)   p_kst 1.995012e-06   p_cons 8.456025e-01   p_joint 1.496259e-06

Joint ci ratio: 1.481619e+00	ci left: 5.477351e-07	ci right 3.248623e-06	k: 6	n:4020000
Cons ci ratio: 8.354079e-04	ci left: 8.452559e-01	ci right 8.459625e-01	k: 3399350	n:4020000
KS ci ratio: 1.306665e+00	ci left: 8.591626e-07	ci right 3.921188e-06	k: 8	n:4020000
TMEM90B   4020000 perm   6270 sec   (641 perm/sec)   p_kst 1.990050e-06   p_cons 8.456095e-01   p_joint 1.492537e-06

Joint ci ratio: 1.481619e+00	ci left: 5.463759e-07	ci right 3.240561e-06	k: 6	n:4030000
Cons ci ratio: 8.344010e-04	ci left: 8.452468e-01	ci right 8.459527e-01	k: 3407768	n:4030000
KS ci ratio: 1.306665e+00	ci left: 8.570307e-07	ci right 3.911458e-06	k: 8	n:4030000
TMEM90B   4030000 perm   6299 sec   (640 perm/sec)   p_kst 1.985112e-06   p_cons 8.456000e-01   p_joint 1.488834e-06

Joint ci ratio: 1.481619e+00	ci left: 5.450235e-07	ci right 3.232540e-06	k: 6	n:4040000
Cons ci ratio: 8.333717e-04	ci left: 8.452460e-01	ci right 8.459510e-01	k: 3416219	n:4040000
KS ci ratio: 1.306665e+00	ci left: 8.549093e-07	ci right 3.901776e-06	k: 8	n:4040000
TMEM90B   4040000 perm   6330 sec   (638 perm/sec)   p_kst 1.980198e-06   p_cons 8.455988e-01   p_joint 1.485149e-06

Joint ci ratio: 1.481619e+00	ci left: 5.436778e-07	ci right 3.224559e-06	k: 6	n:4050000
Cons ci ratio: 8.323532e-04	ci left: 8.452430e-01	ci right 8.459471e-01	k: 3424661	n:4050000
KS ci ratio: 1.306665e+00	ci left: 8.527984e-07	ci right 3.892142e-06	k: 8	n:4050000
TMEM90B   4050000 perm   6359 sec   (637 perm/sec)   p_kst 1.975309e-06   p_cons 8.455953e-01   p_joint 1.481481e-06

Joint ci ratio: 1.385928e+00	ci left: 6.931931e-07	ci right 3.552380e-06	k: 7	n:4060000
Cons ci ratio: 8.312765e-04	ci left: 8.452595e-01	ci right 8.459627e-01	k: 3433182	n:4060000
KS ci ratio: 1.239611e+00	ci left: 1.013639e-06	ci right 4.208075e-06	k: 9	n:4060000
TMEM90B   4060000 perm   6389 sec   (635 perm/sec)   p_kst 2.216749e-06   p_cons 8.456113e-01   p_joint 1.724138e-06

Joint ci ratio: 1.385928e+00	ci left: 6.914900e-07	ci right 3.543652e-06	k: 7	n:4070000
Cons ci ratio: 8.302742e-04	ci left: 8.452538e-01	ci right 8.459561e-01	k: 3441613	n:4070000
KS ci ratio: 1.239611e+00	ci left: 1.011149e-06	ci right 4.197736e-06	k: 9	n:4070000
TMEM90B   4070000 perm   6419 sec   (634 perm/sec)   p_kst 2.211302e-06   p_cons 8.456052e-01   p_joint 1.719902e-06

Joint ci ratio: 1.385928e+00	ci left: 6.897951e-07	ci right 3.534966e-06	k: 7	n:4080000
Cons ci ratio: 8.292336e-04	ci left: 8.452613e-01	ci right 8.459627e-01	k: 3450098	n:4080000
KS ci ratio: 1.239611e+00	ci left: 1.008670e-06	ci right 4.187448e-06	k: 9	n:4080000
TMEM90B   4080000 perm   6448 sec   (633 perm/sec)   p_kst 2.205882e-06   p_cons 8.456123e-01   p_joint 1.715686e-06

Joint ci ratio: 1.385928e+00	ci left: 6.881086e-07	ci right 3.526323e-06	k: 7	n:4090000
Cons ci ratio: 8.281976e-04	ci left: 8.452685e-01	ci right 8.459691e-01	k: 3458582	n:4090000
KS ci ratio: 1.239611e+00	ci left: 1.006204e-06	ci right 4.177209e-06	k: 9	n:4090000
TMEM90B   4090000 perm   6479 sec   (631 perm/sec)   p_kst 2.200489e-06   p_cons 8.456191e-01   p_joint 1.711491e-06

Joint ci ratio: 1.385928e+00	ci left: 6.864303e-07	ci right 3.517723e-06	k: 7	n:4100000
Cons ci ratio: 8.271895e-04	ci left: 8.452682e-01	ci right 8.459679e-01	k: 3467035	n:4100000
KS ci ratio: 1.239611e+00	ci left: 1.003750e-06	ci right 4.167021e-06	k: 9	n:4100000
TMEM90B   4100000 perm   6509 sec   (630 perm/sec)   p_kst 2.195122e-06   p_cons 8.456183e-01   p_joint 1.707317e-06

Joint ci ratio: 1.385928e+00	ci left: 6.847601e-07	ci right 3.509164e-06	k: 7	n:4110000
Cons ci ratio: 8.261650e-04	ci left: 8.452742e-01	ci right 8.459730e-01	k: 3475514	n:4110000
KS ci ratio: 1.239611e+00	ci left: 1.001308e-06	ci right 4.156882e-06	k: 9	n:4110000
TMEM90B   4110000 perm   6539 sec   (629 perm/sec)   p_kst 2.189781e-06   p_cons 8.456238e-01   p_joint 1.703163e-06

Joint ci ratio: 1.385928e+00	ci left: 6.830981e-07	ci right 3.500646e-06	k: 7	n:4120000
Cons ci ratio: 8.250929e-04	ci left: 8.452964e-01	ci right 8.459944e-01	k: 3484060	n:4120000
KS ci ratio: 1.239611e+00	ci left: 9.988774e-07	ci right 4.146793e-06	k: 9	n:4120000
TMEM90B   4120000 perm   6570 sec   (627 perm/sec)   p_kst 2.184466e-06   p_cons 8.456456e-01   p_joint 1.699029e-06

Joint ci ratio: 1.385928e+00	ci left: 6.814441e-07	ci right 3.492170e-06	k: 7	n:4130000
Cons ci ratio: 8.240815e-04	ci left: 8.453006e-01	ci right 8.459977e-01	k: 3492532	n:4130000
KS ci ratio: 1.239611e+00	ci left: 9.964588e-07	ci right 4.136752e-06	k: 9	n:4130000
TMEM90B   4130000 perm   6599 sec   (626 perm/sec)   p_kst 2.179177e-06   p_cons 8.456494e-01   p_joint 1.694915e-06

Joint ci ratio: 1.385928e+00	ci left: 6.797981e-07	ci right 3.483735e-06	k: 7	n:4140000
Cons ci ratio: 8.230951e-04	ci left: 8.452980e-01	ci right 8.459943e-01	k: 3500976	n:4140000
KS ci ratio: 1.239611e+00	ci left: 9.940519e-07	ci right 4.126760e-06	k: 9	n:4140000
TMEM90B   4140000 perm   6630 sec   (624 perm/sec)   p_kst 2.173913e-06   p_cons 8.456464e-01   p_joint 1.690821e-06

Joint ci ratio: 1.385928e+00	ci left: 6.781600e-07	ci right 3.475340e-06	k: 7	n:4150000
Cons ci ratio: 8.221169e-04	ci left: 8.452940e-01	ci right 8.459894e-01	k: 3509414	n:4150000
KS ci ratio: 1.239611e+00	ci left: 9.916566e-07	ci right 4.116816e-06	k: 9	n:4150000
TMEM90B   4150000 perm   6660 sec   (623 perm/sec)   p_kst 2.168675e-06   p_cons 8.456419e-01   p_joint 1.686747e-06

Joint ci ratio: 1.385928e+00	ci left: 6.765298e-07	ci right 3.466986e-06	k: 7	n:4160000
Cons ci ratio: 8.210914e-04	ci left: 8.453061e-01	ci right 8.460007e-01	k: 3517919	n:4160000
KS ci ratio: 1.239611e+00	ci left: 9.892728e-07	ci right 4.106920e-06	k: 9	n:4160000
TMEM90B   4160000 perm   6691 sec   (622 perm/sec)   p_kst 2.163462e-06   p_cons 8.456536e-01   p_joint 1.682692e-06

Joint ci ratio: 1.385928e+00	ci left: 6.749075e-07	ci right 3.458672e-06	k: 7	n:4170000
Cons ci ratio: 8.201067e-04	ci left: 8.453064e-01	ci right 8.460001e-01	k: 3526375	n:4170000
KS ci ratio: 1.239611e+00	ci left: 9.869005e-07	ci right 4.097071e-06	k: 9	n:4170000
TMEM90B   4170000 perm   6721 sec   (620 perm/sec)   p_kst 2.158273e-06   p_cons 8.456535e-01   p_joint 1.678657e-06

Joint ci ratio: 1.385928e+00	ci left: 6.732929e-07	ci right 3.450398e-06	k: 7	n:4180000
Cons ci ratio: 8.190940e-04	ci left: 8.453167e-01	ci right 8.460096e-01	k: 3534873	n:4180000
KS ci ratio: 1.239611e+00	ci left: 9.845395e-07	ci right 4.087270e-06	k: 9	n:4180000
TMEM90B   4180000 perm   6751 sec   (619 perm/sec)   p_kst 2.153110e-06   p_cons 8.456634e-01   p_joint 1.674641e-06

Joint ci ratio: 1.385928e+00	ci left: 6.716859e-07	ci right 3.442163e-06	k: 7	n:4190000
Cons ci ratio: 8.181187e-04	ci left: 8.453163e-01	ci right 8.460083e-01	k: 3543326	n:4190000
KS ci ratio: 1.239611e+00	ci left: 9.821897e-07	ci right 4.077515e-06	k: 9	n:4190000
TMEM90B   4190000 perm   6782 sec   (618 perm/sec)   p_kst 2.147971e-06   p_cons 8.456625e-01   p_joint 1.670644e-06

Joint ci ratio: 1.385928e+00	ci left: 6.700867e-07	ci right 3.433967e-06	k: 7	n:4200000
Cons ci ratio: 8.171521e-04	ci left: 8.453141e-01	ci right 8.460054e-01	k: 3551772	n:4200000
KS ci ratio: 1.239611e+00	ci left: 9.798512e-07	ci right 4.067806e-06	k: 9	n:4200000
TMEM90B   4200000 perm   6814 sec   (616 perm/sec)   p_kst 2.142857e-06   p_cons 8.456600e-01   p_joint 1.666667e-06

Joint ci ratio: 1.385928e+00	ci left: 6.684950e-07	ci right 3.425811e-06	k: 7	n:4210000
Cons ci ratio: 8.161815e-04	ci left: 8.453144e-01	ci right 8.460048e-01	k: 3560228	n:4210000
KS ci ratio: 1.239611e+00	ci left: 9.775238e-07	ci right 4.058144e-06	k: 9	n:4210000
TMEM90B   4210000 perm   6845 sec   (615 perm/sec)   p_kst 2.137767e-06   p_cons 8.456599e-01   p_joint 1.662708e-06

Joint ci ratio: 1.385928e+00	ci left: 6.669109e-07	ci right 3.417693e-06	k: 7	n:4220000
Cons ci ratio: 8.152269e-04	ci left: 8.453106e-01	ci right 8.460003e-01	k: 3568667	n:4220000
KS ci ratio: 1.239611e+00	ci left: 9.752073e-07	ci right 4.048528e-06	k: 9	n:4220000
TMEM90B   4220000 perm   6876 sec   (614 perm/sec)   p_kst 2.132701e-06   p_cons 8.456557e-01   p_joint 1.658768e-06

Joint ci ratio: 1.385928e+00	ci left: 6.653343e-07	ci right 3.409613e-06	k: 7	n:4230000
Cons ci ratio: 8.142255e-04	ci left: 8.453230e-01	ci right 8.460118e-01	k: 3577174	n:4230000
KS ci ratio: 1.239611e+00	ci left: 9.729019e-07	ci right 4.038957e-06	k: 9	n:4230000
TMEM90B   4230000 perm   6907 sec   (612 perm/sec)   p_kst 2.127660e-06   p_cons 8.456676e-01   p_joint 1.654846e-06

Joint ci ratio: 1.385928e+00	ci left: 6.637651e-07	ci right 3.401571e-06	k: 7	n:4240000
Cons ci ratio: 8.132733e-04	ci left: 8.453206e-01	ci right 8.460086e-01	k: 3585619	n:4240000
KS ci ratio: 1.239611e+00	ci left: 9.706073e-07	ci right 4.029431e-06	k: 9	n:4240000
TMEM90B   4240000 perm   6938 sec   (611 perm/sec)   p_kst 2.122642e-06   p_cons 8.456649e-01   p_joint 1.650943e-06

Joint ci ratio: 1.385928e+00	ci left: 6.622033e-07	ci right 3.393568e-06	k: 7	n:4250000
Cons ci ratio: 8.122857e-04	ci left: 8.453308e-01	ci right 8.460179e-01	k: 3594117	n:4250000
KS ci ratio: 1.239611e+00	ci left: 9.683235e-07	ci right 4.019950e-06	k: 9	n:4250000
TMEM90B   4250000 perm   6969 sec   (610 perm/sec)   p_kst 2.117647e-06   p_cons 8.456746e-01   p_joint 1.647059e-06

Joint ci ratio: 1.385928e+00	ci left: 6.606489e-07	ci right 3.385602e-06	k: 7	n:4260000
Cons ci ratio: 8.113374e-04	ci left: 8.453294e-01	ci right 8.460157e-01	k: 3602566	n:4260000
KS ci ratio: 1.239611e+00	ci left: 9.660505e-07	ci right 4.010513e-06	k: 9	n:4260000
TMEM90B   4260000 perm   7001 sec   (608 perm/sec)   p_kst 2.112676e-06   p_cons 8.456728e-01   p_joint 1.643192e-06

Joint ci ratio: 1.385928e+00	ci left: 6.591017e-07	ci right 3.377673e-06	k: 7	n:4270000
Cons ci ratio: 8.103946e-04	ci left: 8.453272e-01	ci right 8.460128e-01	k: 3611012	n:4270000
KS ci ratio: 1.239611e+00	ci left: 9.637880e-07	ci right 4.001121e-06	k: 9	n:4270000
TMEM90B   4270000 perm   7034 sec   (607 perm/sec)   p_kst 2.107728e-06   p_cons 8.456703e-01   p_joint 1.639344e-06

Joint ci ratio: 1.385928e+00	ci left: 6.575617e-07	ci right 3.369781e-06	k: 7	n:4280000
Cons ci ratio: 8.094768e-04	ci left: 8.453181e-01	ci right 8.460029e-01	k: 3619428	n:4280000
KS ci ratio: 1.239611e+00	ci left: 9.615362e-07	ci right 3.991773e-06	k: 9	n:4280000
TMEM90B   4280000 perm   7065 sec   (606 perm/sec)   p_kst 2.102804e-06   p_cons 8.456607e-01   p_joint 1.635514e-06

Joint ci ratio: 1.385928e+00	ci left: 6.560289e-07	ci right 3.361926e-06	k: 7	n:4290000
Cons ci ratio: 8.085304e-04	ci left: 8.453193e-01	ci right 8.460033e-01	k: 3627888	n:4290000
KS ci ratio: 1.239611e+00	ci left: 9.592949e-07	ci right 3.982468e-06	k: 9	n:4290000
TMEM90B   4290000 perm   7097 sec   (605 perm/sec)   p_kst 2.097902e-06   p_cons 8.456615e-01   p_joint 1.631702e-06

Joint ci ratio: 1.385928e+00	ci left: 6.545033e-07	ci right 3.354108e-06	k: 7	n:4300000
Cons ci ratio: 8.076110e-04	ci left: 8.453128e-01	ci right 8.459960e-01	k: 3636315	n:4300000
KS ci ratio: 1.239611e+00	ci left: 9.570639e-07	ci right 3.973206e-06	k: 9	n:4300000
TMEM90B   4300000 perm   7128 sec   (603 perm/sec)   p_kst 2.093023e-06   p_cons 8.456547e-01   p_joint 1.627907e-06

Joint ci ratio: 1.385928e+00	ci left: 6.529847e-07	ci right 3.346326e-06	k: 7	n:4310000
Cons ci ratio: 8.066553e-04	ci left: 8.453191e-01	ci right 8.460015e-01	k: 3644797	n:4310000
KS ci ratio: 1.239611e+00	ci left: 9.548434e-07	ci right 3.963988e-06	k: 9	n:4310000
TMEM90B   4310000 perm   7159 sec   (602 perm/sec)   p_kst 2.088167e-06   p_cons 8.456606e-01   p_joint 1.624130e-06

Joint ci ratio: 1.385928e+00	ci left: 6.514732e-07	ci right 3.338579e-06	k: 7	n:4320000
Cons ci ratio: 8.057330e-04	ci left: 8.453157e-01	ci right 8.459973e-01	k: 3653237	n:4320000
KS ci ratio: 1.239611e+00	ci left: 9.526331e-07	ci right 3.954812e-06	k: 9	n:4320000
TMEM90B   4320000 perm   7191 sec   (601 perm/sec)   p_kst 2.083333e-06   p_cons 8.456567e-01   p_joint 1.620370e-06

Joint ci ratio: 1.385928e+00	ci left: 6.499686e-07	ci right 3.330869e-06	k: 7	n:4330000
Cons ci ratio: 8.048323e-04	ci left: 8.453062e-01	ci right 8.459871e-01	k: 3661651	n:4330000
KS ci ratio: 1.239611e+00	ci left: 9.504330e-07	ci right 3.945678e-06	k: 9	n:4330000
TMEM90B   4330000 perm   7223 sec   (599 perm/sec)   p_kst 2.078522e-06   p_cons 8.456469e-01   p_joint 1.616628e-06

Joint ci ratio: 1.385928e+00	ci left: 6.484710e-07	ci right 3.323194e-06	k: 7	n:4340000
Cons ci ratio: 8.038978e-04	ci left: 8.453088e-01	ci right 8.459889e-01	k: 3670117	n:4340000
KS ci ratio: 1.239611e+00	ci left: 9.482431e-07	ci right 3.936587e-06	k: 9	n:4340000
TMEM90B   4340000 perm   7256 sec   (598 perm/sec)   p_kst 2.073733e-06   p_cons 8.456491e-01   p_joint 1.612903e-06

Joint ci ratio: 1.306665e+00	ci left: 7.939847e-07	ci right 3.623718e-06	k: 8	n:4350000
Cons ci ratio: 8.029722e-04	ci left: 8.453096e-01	ci right 8.459888e-01	k: 3678575	n:4350000
KS ci ratio: 1.181923e+00	ci left: 1.102389e-06	ci right 4.227664e-06	k: 10	n:4350000
TMEM90B   4350000 perm   7288 sec   (597 perm/sec)   p_kst 2.298851e-06   p_cons 8.456494e-01   p_joint 1.839080e-06

Joint ci ratio: 1.306665e+00	ci left: 7.921637e-07	ci right 3.615407e-06	k: 8	n:4360000
Cons ci ratio: 8.020554e-04	ci left: 8.453085e-01	ci right 8.459869e-01	k: 3687025	n:4360000
KS ci ratio: 1.181923e+00	ci left: 1.099860e-06	ci right 4.217968e-06	k: 10	n:4360000
TMEM90B   4360000 perm   7320 sec   (596 perm/sec)   p_kst 2.293578e-06   p_cons 8.456479e-01   p_joint 1.834862e-06

Joint ci ratio: 1.306665e+00	ci left: 7.903509e-07	ci right 3.607134e-06	k: 8	n:4370000
Cons ci ratio: 8.011277e-04	ci left: 8.453120e-01	ci right 8.459896e-01	k: 3695495	n:4370000
KS ci ratio: 1.181923e+00	ci left: 1.097343e-06	ci right 4.208315e-06	k: 10	n:4370000
TMEM90B   4370000 perm   7352 sec   (594 perm/sec)   p_kst 2.288330e-06   p_cons 8.456510e-01   p_joint 1.830664e-06

Joint ci ratio: 1.306665e+00	ci left: 7.885465e-07	ci right 3.598898e-06	k: 8	n:4380000
Cons ci ratio: 8.001871e-04	ci left: 8.453207e-01	ci right 8.459976e-01	k: 3703988	n:4380000
KS ci ratio: 1.181923e+00	ci left: 1.094838e-06	ci right 4.198707e-06	k: 10	n:4380000
TMEM90B   4380000 perm   7384 sec   (593 perm/sec)   p_kst 2.283105e-06   p_cons 8.456594e-01   p_joint 1.826484e-06

Joint ci ratio: 1.306665e+00	ci left: 7.867502e-07	ci right 3.590701e-06	k: 8	n:4390000
Cons ci ratio: 7.992512e-04	ci left: 8.453289e-01	ci right 8.460050e-01	k: 3712479	n:4390000
KS ci ratio: 1.181923e+00	ci left: 1.092344e-06	ci right 4.189143e-06	k: 10	n:4390000
TMEM90B   4390000 perm   7416 sec   (592 perm/sec)   p_kst 2.277904e-06   p_cons 8.456672e-01   p_joint 1.822323e-06

Joint ci ratio: 1.306665e+00	ci left: 7.849622e-07	ci right 3.582540e-06	k: 8	n:4400000
Cons ci ratio: 7.983339e-04	ci left: 8.453321e-01	ci right 8.460074e-01	k: 3720948	n:4400000
KS ci ratio: 1.181923e+00	ci left: 1.089862e-06	ci right 4.179622e-06	k: 10	n:4400000
TMEM90B   4400000 perm   7448 sec   (591 perm/sec)   p_kst 2.272727e-06   p_cons 8.456700e-01   p_joint 1.818182e-06

Joint ci ratio: 1.306665e+00	ci left: 7.831822e-07	ci right 3.574416e-06	k: 8	n:4410000
Cons ci ratio: 7.974391e-04	ci left: 8.453289e-01	ci right 8.460035e-01	k: 3729389	n:4410000
KS ci ratio: 1.181923e+00	ci left: 1.087390e-06	ci right 4.170145e-06	k: 10	n:4410000
TMEM90B   4410000 perm   7480 sec   (590 perm/sec)   p_kst 2.267574e-06   p_cons 8.456664e-01   p_joint 1.814059e-06

Joint ci ratio: 1.306665e+00	ci left: 7.814103e-07	ci right 3.566329e-06	k: 8	n:4420000
Cons ci ratio: 7.965114e-04	ci left: 8.453375e-01	ci right 8.460113e-01	k: 3737882	n:4420000
KS ci ratio: 1.181923e+00	ci left: 1.084930e-06	ci right 4.160710e-06	k: 10	n:4420000
TMEM90B   4420000 perm   7513 sec   (588 perm/sec)   p_kst 2.262443e-06   p_cons 8.456747e-01   p_joint 1.809955e-06

Joint ci ratio: 1.306665e+00	ci left: 7.796464e-07	ci right 3.558279e-06	k: 8	n:4430000
Cons ci ratio: 7.955987e-04	ci left: 8.453423e-01	ci right 8.460153e-01	k: 3746358	n:4430000
KS ci ratio: 1.181923e+00	ci left: 1.082481e-06	ci right 4.151318e-06	k: 10	n:4430000
TMEM90B   4430000 perm   7546 sec   (587 perm/sec)   p_kst 2.257336e-06   p_cons 8.456790e-01   p_joint 1.805869e-06

Joint ci ratio: 1.306665e+00	ci left: 7.778904e-07	ci right 3.550265e-06	k: 8	n:4440000
Cons ci ratio: 7.946980e-04	ci left: 8.453440e-01	ci right 8.460163e-01	k: 3754821	n:4440000
KS ci ratio: 1.181923e+00	ci left: 1.080043e-06	ci right 4.141968e-06	k: 10	n:4440000
TMEM90B   4440000 perm   7578 sec   (586 perm/sec)   p_kst 2.252252e-06   p_cons 8.456804e-01   p_joint 1.801802e-06

Joint ci ratio: 1.306665e+00	ci left: 7.761424e-07	ci right 3.542287e-06	k: 8	n:4450000
Cons ci ratio: 7.937989e-04	ci left: 8.453463e-01	ci right 8.460178e-01	k: 3763286	n:4450000
KS ci ratio: 1.181923e+00	ci left: 1.077616e-06	ci right 4.132660e-06	k: 10	n:4450000
TMEM90B   4450000 perm   7610 sec   (585 perm/sec)   p_kst 2.247191e-06   p_cons 8.456822e-01   p_joint 1.797753e-06

Joint ci ratio: 1.306665e+00	ci left: 7.744021e-07	ci right 3.534344e-06	k: 8	n:4460000
Cons ci ratio: 7.928512e-04	ci left: 8.453655e-01	ci right 8.460363e-01	k: 3771827	n:4460000
KS ci ratio: 1.181923e+00	ci left: 1.075200e-06	ci right 4.123394e-06	k: 10	n:4460000
TMEM90B   4460000 perm   7643 sec   (584 perm/sec)   p_kst 2.242152e-06   p_cons 8.457011e-01   p_joint 1.793722e-06

Joint ci ratio: 1.306665e+00	ci left: 7.726697e-07	ci right 3.526437e-06	k: 8	n:4470000
Cons ci ratio: 7.919700e-04	ci left: 8.453639e-01	ci right 8.460339e-01	k: 3780275	n:4470000
KS ci ratio: 1.181923e+00	ci left: 1.072794e-06	ci right 4.114170e-06	k: 10	n:4470000
TMEM90B   4470000 perm   7676 sec   (582 perm/sec)   p_kst 2.237136e-06   p_cons 8.456991e-01   p_joint 1.789709e-06

Joint ci ratio: 1.306665e+00	ci left: 7.709450e-07	ci right 3.518566e-06	k: 8	n:4480000
Cons ci ratio: 7.910876e-04	ci left: 8.453636e-01	ci right 8.460328e-01	k: 3788729	n:4480000
KS ci ratio: 1.181923e+00	ci left: 1.070400e-06	ci right 4.104986e-06	k: 10	n:4480000
TMEM90B   4480000 perm   7709 sec   (581 perm/sec)   p_kst 2.232143e-06   p_cons 8.456984e-01   p_joint 1.785714e-06

Joint ci ratio: 1.306665e+00	ci left: 7.692280e-07	ci right 3.510730e-06	k: 8	n:4490000
Cons ci ratio: 7.901792e-04	ci left: 8.453729e-01	ci right 8.460414e-01	k: 3797226	n:4490000
KS ci ratio: 1.181923e+00	ci left: 1.068016e-06	ci right 4.095844e-06	k: 10	n:4490000
TMEM90B   4490000 perm   7743 sec   (580 perm/sec)   p_kst 2.227171e-06   p_cons 8.457073e-01   p_joint 1.781737e-06

Joint ci ratio: 1.306665e+00	ci left: 7.675186e-07	ci right 3.502928e-06	k: 8	n:4500000
Cons ci ratio: 7.893364e-04	ci left: 8.453615e-01	ci right 8.460292e-01	k: 3805630	n:4500000
KS ci ratio: 1.181923e+00	ci left: 1.065642e-06	ci right 4.086742e-06	k: 10	n:4500000
TMEM90B   4500000 perm   7776 sec   (579 perm/sec)   p_kst 2.222222e-06   p_cons 8.456956e-01   p_joint 1.777778e-06

Joint ci ratio: 1.306665e+00	ci left: 7.658167e-07	ci right 3.495161e-06	k: 8	n:4510000
Cons ci ratio: 7.884742e-04	ci left: 8.453574e-01	ci right 8.460244e-01	k: 3814067	n:4510000
KS ci ratio: 1.181923e+00	ci left: 1.063280e-06	ci right 4.077680e-06	k: 10	n:4510000
TMEM90B   4510000 perm   7809 sec   (578 perm/sec)   p_kst 2.217295e-06   p_cons 8.456911e-01   p_joint 1.773836e-06

Joint ci ratio: 1.306665e+00	ci left: 7.641225e-07	ci right 3.487428e-06	k: 8	n:4520000
Cons ci ratio: 7.876208e-04	ci left: 8.453514e-01	ci right 8.460177e-01	k: 3822495	n:4520000
KS ci ratio: 1.181923e+00	ci left: 1.060927e-06	ci right 4.068659e-06	k: 10	n:4520000
TMEM90B   4520000 perm   7842 sec   (576 perm/sec)   p_kst 2.212389e-06   p_cons 8.456847e-01   p_joint 1.769912e-06

Joint ci ratio: 1.306665e+00	ci left: 7.624357e-07	ci right 3.479730e-06	k: 8	n:4530000
Cons ci ratio: 7.867941e-04	ci left: 8.453374e-01	ci right 8.460030e-01	k: 3830887	n:4530000
KS ci ratio: 1.181923e+00	ci left: 1.058585e-06	ci right 4.059677e-06	k: 10	n:4530000
TMEM90B   4530000 perm   7875 sec   (575 perm/sec)   p_kst 2.207506e-06   p_cons 8.456704e-01   p_joint 1.766004e-06

Joint ci ratio: 1.306665e+00	ci left: 7.607563e-07	ci right 3.472065e-06	k: 8	n:4540000
Cons ci ratio: 7.859249e-04	ci left: 8.453385e-01	ci right 8.460033e-01	k: 3839347	n:4540000
KS ci ratio: 1.181923e+00	ci left: 1.056254e-06	ci right 4.050735e-06	k: 10	n:4540000
TMEM90B   4540000 perm   7909 sec   (574 perm/sec)   p_kst 2.202643e-06   p_cons 8.456711e-01   p_joint 1.762115e-06

Joint ci ratio: 1.306665e+00	ci left: 7.590843e-07	ci right 3.464434e-06	k: 8	n:4550000
Cons ci ratio: 7.850870e-04	ci left: 8.453301e-01	ci right 8.459943e-01	k: 3847764	n:4550000
KS ci ratio: 1.181923e+00	ci left: 1.053932e-06	ci right 4.041833e-06	k: 10	n:4550000
TMEM90B   4550000 perm   7942 sec   (573 perm/sec)   p_kst 2.197802e-06   p_cons 8.456624e-01   p_joint 1.758242e-06

Joint ci ratio: 1.306665e+00	ci left: 7.574196e-07	ci right 3.456837e-06	k: 8	n:4560000
Cons ci ratio: 7.841866e-04	ci left: 8.453435e-01	ci right 8.460069e-01	k: 3856280	n:4560000
KS ci ratio: 1.181923e+00	ci left: 1.051621e-06	ci right 4.032969e-06	k: 10	n:4560000
TMEM90B   4560000 perm   7975 sec   (572 perm/sec)   p_kst 2.192982e-06   p_cons 8.456754e-01   p_joint 1.754386e-06

Joint ci ratio: 1.306665e+00	ci left: 7.557623e-07	ci right 3.449273e-06	k: 8	n:4570000
Cons ci ratio: 7.833392e-04	ci left: 8.453402e-01	ci right 8.460029e-01	k: 3864720	n:4570000
KS ci ratio: 1.181923e+00	ci left: 1.049320e-06	ci right 4.024144e-06	k: 10	n:4570000
TMEM90B   4570000 perm   8008 sec   (571 perm/sec)   p_kst 2.188184e-06   p_cons 8.456718e-01   p_joint 1.750547e-06

Joint ci ratio: 1.306665e+00	ci left: 7.541121e-07	ci right 3.441741e-06	k: 8	n:4580000
Cons ci ratio: 7.825200e-04	ci left: 8.453284e-01	ci right 8.459904e-01	k: 3873121	n:4580000
KS ci ratio: 1.181923e+00	ci left: 1.047029e-06	ci right 4.015358e-06	k: 10	n:4580000
TMEM90B   4580000 perm   8042 sec   (569 perm/sec)   p_kst 2.183406e-06   p_cons 8.456596e-01   p_joint 1.746725e-06

Joint ci ratio: 1.306665e+00	ci left: 7.524692e-07	ci right 3.434243e-06	k: 8	n:4590000
Cons ci ratio: 7.816799e-04	ci left: 8.453245e-01	ci right 8.459857e-01	k: 3881558	n:4590000
KS ci ratio: 1.181923e+00	ci left: 1.044747e-06	ci right 4.006610e-06	k: 10	n:4590000
TMEM90B   4590000 perm   8076 sec   (568 perm/sec)   p_kst 2.178649e-06   p_cons 8.456553e-01   p_joint 1.742919e-06

Joint ci ratio: 1.306665e+00	ci left: 7.508334e-07	ci right 3.426777e-06	k: 8	n:4600000
Cons ci ratio: 7.808230e-04	ci left: 8.453271e-01	ci right 8.459876e-01	k: 3890025	n:4600000
KS ci ratio: 1.181923e+00	ci left: 1.042476e-06	ci right 3.997900e-06	k: 10	n:4600000
TMEM90B   4600000 perm   8110 sec   (567 perm/sec)   p_kst 2.173913e-06   p_cons 8.456576e-01   p_joint 1.739130e-06

Joint ci ratio: 1.306665e+00	ci left: 7.492047e-07	ci right 3.419344e-06	k: 8	n:4610000
Cons ci ratio: 7.799903e-04	ci left: 8.453226e-01	ci right 8.459824e-01	k: 3898459	n:4610000
KS ci ratio: 1.181923e+00	ci left: 1.040215e-06	ci right 3.989228e-06	k: 10	n:4610000
TMEM90B   4610000 perm   8144 sec   (566 perm/sec)   p_kst 2.169197e-06   p_cons 8.456527e-01   p_joint 1.735358e-06

Joint ci ratio: 1.306665e+00	ci left: 7.475830e-07	ci right 3.411943e-06	k: 8	n:4620000
Cons ci ratio: 7.791848e-04	ci left: 8.453098e-01	ci right 8.459690e-01	k: 3906855	n:4620000
KS ci ratio: 1.181923e+00	ci left: 1.037963e-06	ci right 3.980593e-06	k: 10	n:4620000
TMEM90B   4620000 perm   8178 sec   (565 perm/sec)   p_kst 2.164502e-06   p_cons 8.456396e-01   p_joint 1.731602e-06

Joint ci ratio: 1.306665e+00	ci left: 7.459684e-07	ci right 3.404574e-06	k: 8	n:4630000
Cons ci ratio: 7.783811e-04	ci left: 8.452974e-01	ci right 8.459558e-01	k: 3915252	n:4630000
KS ci ratio: 1.181923e+00	ci left: 1.035722e-06	ci right 3.971996e-06	k: 10	n:4630000
TMEM90B   4630000 perm   8212 sec   (564 perm/sec)   p_kst 2.159827e-06   p_cons 8.456268e-01   p_joint 1.727862e-06

Joint ci ratio: 1.306665e+00	ci left: 7.443607e-07	ci right 3.397236e-06	k: 8	n:4640000
Cons ci ratio: 7.775164e-04	ci left: 8.453063e-01	ci right 8.459640e-01	k: 3923748	n:4640000
KS ci ratio: 1.181923e+00	ci left: 1.033489e-06	ci right 3.963435e-06	k: 10	n:4640000
TMEM90B   4640000 perm   8246 sec   (563 perm/sec)   p_kst 2.155172e-06   p_cons 8.456353e-01   p_joint 1.724138e-06

Joint ci ratio: 1.306665e+00	ci left: 7.427599e-07	ci right 3.389930e-06	k: 8	n:4650000
Cons ci ratio: 7.766942e-04	ci left: 8.453018e-01	ci right 8.459588e-01	k: 3932182	n:4650000
KS ci ratio: 1.181923e+00	ci left: 1.031267e-06	ci right 3.954912e-06	k: 10	n:4650000
TMEM90B   4650000 perm   8280 sec   (562 perm/sec)   p_kst 2.150538e-06   p_cons 8.456305e-01   p_joint 1.720430e-06

Joint ci ratio: 1.306665e+00	ci left: 7.411660e-07	ci right 3.382656e-06	k: 8	n:4660000
Cons ci ratio: 7.758918e-04	ci left: 8.452916e-01	ci right 8.459479e-01	k: 3940589	n:4660000
KS ci ratio: 1.181923e+00	ci left: 1.029054e-06	ci right 3.946425e-06	k: 10	n:4660000
TMEM90B   4660000 perm   8313 sec   (561 perm/sec)   p_kst 2.145923e-06   p_cons 8.456200e-01   p_joint 1.716738e-06

Joint ci ratio: 1.306665e+00	ci left: 7.395789e-07	ci right 3.375412e-06	k: 8	n:4670000
Cons ci ratio: 7.750875e-04	ci left: 8.452829e-01	ci right 8.459385e-01	k: 3949003	n:4670000
KS ci ratio: 1.181923e+00	ci left: 1.026850e-06	ci right 3.937974e-06	k: 10	n:4670000
TMEM90B   4670000 perm   8348 sec   (559 perm/sec)   p_kst 2.141328e-06   p_cons 8.456109e-01   p_joint 1.713062e-06

Joint ci ratio: 1.306665e+00	ci left: 7.379986e-07	ci right 3.368200e-06	k: 8	n:4680000
Cons ci ratio: 7.742204e-04	ci left: 8.452963e-01	ci right 8.459512e-01	k: 3957520	n:4680000
KS ci ratio: 1.181923e+00	ci left: 1.024656e-06	ci right 3.929560e-06	k: 10	n:4680000
TMEM90B   4680000 perm   8382 sec   (558 perm/sec)   p_kst 2.136752e-06   p_cons 8.456239e-01   p_joint 1.709402e-06

Joint ci ratio: 1.306665e+00	ci left: 7.364250e-07	ci right 3.361018e-06	k: 8	n:4690000
Cons ci ratio: 7.734181e-04	ci left: 8.452887e-01	ci right 8.459429e-01	k: 3965939	n:4690000
KS ci ratio: 1.181923e+00	ci left: 1.022471e-06	ci right 3.921181e-06	k: 10	n:4690000
TMEM90B   4690000 perm   8417 sec   (557 perm/sec)   p_kst 2.132196e-06   p_cons 8.456160e-01   p_joint 1.705757e-06

Joint ci ratio: 1.306665e+00	ci left: 7.348582e-07	ci right 3.353867e-06	k: 8	n:4700000
Cons ci ratio: 7.725893e-04	ci left: 8.452909e-01	ci right 8.459444e-01	k: 3974404	n:4700000
KS ci ratio: 1.181923e+00	ci left: 1.020296e-06	ci right 3.912838e-06	k: 10	n:4700000
TMEM90B   4700000 perm   8452 sec   (556 perm/sec)   p_kst 2.127660e-06   p_cons 8.456179e-01   p_joint 1.702128e-06

Joint ci ratio: 1.306665e+00	ci left: 7.332980e-07	ci right 3.346747e-06	k: 8	n:4710000
Cons ci ratio: 7.717663e-04	ci left: 8.452921e-01	ci right 8.459449e-01	k: 3982864	n:4710000
KS ci ratio: 1.181923e+00	ci left: 1.018130e-06	ci right 3.904531e-06	k: 10	n:4710000
TMEM90B   4710000 perm   8486 sec   (555 perm/sec)   p_kst 2.123142e-06   p_cons 8.456187e-01   p_joint 1.698514e-06

Joint ci ratio: 1.306665e+00	ci left: 7.317444e-07	ci right 3.339656e-06	k: 8	n:4720000
Cons ci ratio: 7.709878e-04	ci left: 8.452790e-01	ci right 8.459312e-01	k: 3991257	n:4720000
KS ci ratio: 1.181923e+00	ci left: 1.015973e-06	ci right 3.896258e-06	k: 10	n:4720000
TMEM90B   4720000 perm   8521 sec   (554 perm/sec)   p_kst 2.118644e-06   p_cons 8.456053e-01   p_joint 1.694915e-06

Joint ci ratio: 1.306665e+00	ci left: 7.301973e-07	ci right 3.332595e-06	k: 8	n:4730000
Cons ci ratio: 7.701537e-04	ci left: 8.452857e-01	ci right 8.459371e-01	k: 3999743	n:4730000
KS ci ratio: 1.181923e+00	ci left: 1.013825e-06	ci right 3.888021e-06	k: 10	n:4730000
TMEM90B   4730000 perm   8556 sec   (553 perm/sec)   p_kst 2.114165e-06   p_cons 8.456116e-01   p_joint 1.691332e-06

Joint ci ratio: 1.306665e+00	ci left: 7.286569e-07	ci right 3.325565e-06	k: 8	n:4740000
Cons ci ratio: 7.692919e-04	ci left: 8.453027e-01	ci right 8.459534e-01	k: 4008278	n:4740000
KS ci ratio: 1.181923e+00	ci left: 1.011686e-06	ci right 3.879819e-06	k: 10	n:4740000
TMEM90B   4740000 perm   8591 sec   (552 perm/sec)   p_kst 2.109705e-06   p_cons 8.456283e-01   p_joint 1.687764e-06

Joint ci ratio: 1.306665e+00	ci left: 7.271228e-07	ci right 3.318563e-06	k: 8	n:4750000
Cons ci ratio: 7.684769e-04	ci left: 8.453047e-01	ci right 8.459547e-01	k: 4016742	n:4750000
KS ci ratio: 1.181923e+00	ci left: 1.009556e-06	ci right 3.871650e-06	k: 10	n:4750000
TMEM90B   4750000 perm   8625 sec   (551 perm/sec)   p_kst 2.105263e-06   p_cons 8.456299e-01   p_joint 1.684211e-06

Joint ci ratio: 1.306665e+00	ci left: 7.255953e-07	ci right 3.311592e-06	k: 8	n:4760000
Cons ci ratio: 7.676385e-04	ci left: 8.453155e-01	ci right 8.459648e-01	k: 4025248	n:4760000
KS ci ratio: 1.181923e+00	ci left: 1.007435e-06	ci right 3.863517e-06	k: 10	n:4760000
TMEM90B   4760000 perm   8660 sec   (550 perm/sec)   p_kst 2.100840e-06   p_cons 8.456403e-01   p_joint 1.680672e-06

Joint ci ratio: 1.306665e+00	ci left: 7.240741e-07	ci right 3.304649e-06	k: 8	n:4770000
Cons ci ratio: 7.668257e-04	ci left: 8.453184e-01	ci right 8.459671e-01	k: 4033717	n:4770000
KS ci ratio: 1.181923e+00	ci left: 1.005323e-06	ci right 3.855417e-06	k: 10	n:4770000
TMEM90B   4770000 perm   8696 sec   (549 perm/sec)   p_kst 2.096436e-06   p_cons 8.456430e-01   p_joint 1.677149e-06

Joint ci ratio: 1.306665e+00	ci left: 7.225593e-07	ci right 3.297736e-06	k: 8	n:4780000
Cons ci ratio: 7.660081e-04	ci left: 8.453239e-01	ci right 8.459719e-01	k: 4042198	n:4780000
KS ci ratio: 1.181923e+00	ci left: 1.003220e-06	ci right 3.847351e-06	k: 10	n:4780000
TMEM90B   4780000 perm   8731 sec   (547 perm/sec)   p_kst 2.092050e-06   p_cons 8.456481e-01   p_joint 1.673640e-06

Joint ci ratio: 1.306665e+00	ci left: 7.210508e-07	ci right 3.290851e-06	k: 8	n:4790000
Cons ci ratio: 7.652469e-04	ci left: 8.453110e-01	ci right 8.459583e-01	k: 4050591	n:4790000
KS ci ratio: 1.181923e+00	ci left: 1.001125e-06	ci right 3.839319e-06	k: 10	n:4790000
TMEM90B   4790000 perm   8766 sec   (546 perm/sec)   p_kst 2.087683e-06   p_cons 8.456349e-01   p_joint 1.670146e-06

Joint ci ratio: 1.306665e+00	ci left: 7.195486e-07	ci right 3.283995e-06	k: 8	n:4800000
Cons ci ratio: 7.644612e-04	ci left: 8.453073e-01	ci right 8.459539e-01	k: 4059028	n:4800000
KS ci ratio: 1.181923e+00	ci left: 9.990397e-07	ci right 3.831321e-06	k: 10	n:4800000
TMEM90B   4800000 perm   8802 sec   (545 perm/sec)   p_kst 2.083333e-06   p_cons 8.456308e-01   p_joint 1.666667e-06

Joint ci ratio: 1.306665e+00	ci left: 7.180527e-07	ci right 3.277168e-06	k: 8	n:4810000
Cons ci ratio: 7.636863e-04	ci left: 8.453007e-01	ci right 8.459467e-01	k: 4067451	n:4810000
KS ci ratio: 1.181923e+00	ci left: 9.969627e-07	ci right 3.823356e-06	k: 10	n:4810000
TMEM90B   4810000 perm   8837 sec   (544 perm/sec)   p_kst 2.079002e-06   p_cons 8.456239e-01   p_joint 1.663202e-06

Joint ci ratio: 1.306665e+00	ci left: 7.165630e-07	ci right 3.270369e-06	k: 8	n:4820000
Cons ci ratio: 7.629369e-04	ci left: 8.452863e-01	ci right 8.459316e-01	k: 4075836	n:4820000
KS ci ratio: 1.181923e+00	ci left: 9.948944e-07	ci right 3.815423e-06	k: 10	n:4820000
TMEM90B   4820000 perm   8873 sec   (543 perm/sec)   p_kst 2.074689e-06   p_cons 8.456091e-01   p_joint 1.659751e-06

Joint ci ratio: 1.306665e+00	ci left: 7.150794e-07	ci right 3.263598e-06	k: 8	n:4830000
Cons ci ratio: 7.621625e-04	ci left: 8.452812e-01	ci right 8.459259e-01	k: 4084266	n:4830000
KS ci ratio: 1.181923e+00	ci left: 9.928345e-07	ci right 3.807524e-06	k: 10	n:4830000
TMEM90B   4830000 perm   8909 sec   (542 perm/sec)   p_kst 2.070393e-06   p_cons 8.456037e-01   p_joint 1.656315e-06

Joint ci ratio: 1.306665e+00	ci left: 7.136020e-07	ci right 3.256855e-06	k: 8	n:4840000
Cons ci ratio: 7.613645e-04	ci left: 8.452850e-01	ci right 8.459290e-01	k: 4092739	n:4840000
KS ci ratio: 1.181923e+00	ci left: 9.907832e-07	ci right 3.799657e-06	k: 10	n:4840000
TMEM90B   4840000 perm   8945 sec   (541 perm/sec)   p_kst 2.066116e-06   p_cons 8.456072e-01   p_joint 1.652893e-06

Joint ci ratio: 1.306665e+00	ci left: 7.121306e-07	ci right 3.250140e-06	k: 8	n:4850000
Cons ci ratio: 7.605720e-04	ci left: 8.452878e-01	ci right 8.459312e-01	k: 4101207	n:4850000
KS ci ratio: 1.181923e+00	ci left: 9.887404e-07	ci right 3.791823e-06	k: 10	n:4850000
TMEM90B   4850000 perm   8980 sec   (540 perm/sec)   p_kst 2.061856e-06   p_cons 8.456097e-01   p_joint 1.649485e-06

Joint ci ratio: 1.306665e+00	ci left: 7.106653e-07	ci right 3.243452e-06	k: 8	n:4860000
Cons ci ratio: 7.597856e-04	ci left: 8.452894e-01	ci right 8.459320e-01	k: 4109669	n:4860000
KS ci ratio: 1.181923e+00	ci left: 9.867059e-07	ci right 3.784021e-06	k: 10	n:4860000
TMEM90B   4860000 perm   9015 sec   (539 perm/sec)   p_kst 2.057613e-06   p_cons 8.456109e-01   p_joint 1.646091e-06

Joint ci ratio: 1.306665e+00	ci left: 7.092060e-07	ci right 3.236792e-06	k: 8	n:4870000
Cons ci ratio: 7.590082e-04	ci left: 8.452886e-01	ci right 8.459307e-01	k: 4118120	n:4870000
KS ci ratio: 1.181923e+00	ci left: 9.846798e-07	ci right 3.776251e-06	k: 10	n:4870000
TMEM90B   4870000 perm   9050 sec   (538 perm/sec)   p_kst 2.053388e-06   p_cons 8.456099e-01   p_joint 1.642710e-06

Joint ci ratio: 1.306665e+00	ci left: 7.077528e-07	ci right 3.230159e-06	k: 8	n:4880000
Cons ci ratio: 7.582046e-04	ci left: 8.452978e-01	ci right 8.459391e-01	k: 4126619	n:4880000
KS ci ratio: 1.181923e+00	ci left: 9.826620e-07	ci right 3.768512e-06	k: 10	n:4880000
TMEM90B   4880000 perm   9084 sec   (537 perm/sec)   p_kst 2.049180e-06   p_cons 8.456186e-01   p_joint 1.639344e-06

Joint ci ratio: 1.306665e+00	ci left: 7.063054e-07	ci right 3.223554e-06	k: 8	n:4890000
Cons ci ratio: 7.574320e-04	ci left: 8.452970e-01	ci right 8.459377e-01	k: 4135070	n:4890000
KS ci ratio: 1.181923e+00	ci left: 9.806525e-07	ci right 3.760806e-06	k: 10	n:4890000
TMEM90B   4890000 perm   9119 sec   (536 perm/sec)   p_kst 2.044990e-06   p_cons 8.456176e-01   p_joint 1.635992e-06

Joint ci ratio: 1.306665e+00	ci left: 7.048640e-07	ci right 3.216975e-06	k: 8	n:4900000
Cons ci ratio: 7.566358e-04	ci left: 8.453053e-01	ci right 8.459453e-01	k: 4143565	n:4900000
KS ci ratio: 1.181923e+00	ci left: 9.786512e-07	ci right 3.753131e-06	k: 10	n:4900000
TMEM90B   4900000 perm   9155 sec   (535 perm/sec)   p_kst 2.040816e-06   p_cons 8.456255e-01   p_joint 1.632653e-06

Joint ci ratio: 1.306665e+00	ci left: 7.034284e-07	ci right 3.210423e-06	k: 8	n:4910000
Cons ci ratio: 7.558526e-04	ci left: 8.453098e-01	ci right 8.459492e-01	k: 4152042	n:4910000
KS ci ratio: 1.181923e+00	ci left: 9.766580e-07	ci right 3.745487e-06	k: 10	n:4910000
TMEM90B   4910000 perm   9191 sec   (534 perm/sec)   p_kst 2.036660e-06   p_cons 8.456297e-01   p_joint 1.629328e-06

Joint ci ratio: 1.306665e+00	ci left: 7.019987e-07	ci right 3.203898e-06	k: 8	n:4920000
Cons ci ratio: 7.550913e-04	ci left: 8.453077e-01	ci right 8.459464e-01	k: 4160486	n:4920000
KS ci ratio: 1.181923e+00	ci left: 9.746729e-07	ci right 3.737874e-06	k: 10	n:4920000
TMEM90B   4920000 perm   9226 sec   (533 perm/sec)   p_kst 2.032520e-06   p_cons 8.456272e-01   p_joint 1.626016e-06

Joint ci ratio: 1.306665e+00	ci left: 7.005747e-07	ci right 3.197399e-06	k: 8	n:4930000
Cons ci ratio: 7.543329e-04	ci left: 8.453053e-01	ci right 8.459434e-01	k: 4168929	n:4930000
KS ci ratio: 1.181923e+00	ci left: 9.726959e-07	ci right 3.730292e-06	k: 10	n:4930000
TMEM90B   4930000 perm   9263 sec   (532 perm/sec)   p_kst 2.028398e-06   p_cons 8.456245e-01   p_joint 1.622718e-06

Joint ci ratio: 1.306665e+00	ci left: 6.991566e-07	ci right 3.190926e-06	k: 8	n:4940000
Cons ci ratio: 7.536001e-04	ci left: 8.452948e-01	ci right 8.459323e-01	k: 4177332	n:4940000
KS ci ratio: 1.181923e+00	ci left: 9.707269e-07	ci right 3.722741e-06	k: 10	n:4940000
TMEM90B   4940000 perm   9298 sec   (531 perm/sec)   p_kst 2.024291e-06   p_cons 8.456138e-01   p_joint 1.619433e-06

Joint ci ratio: 1.306665e+00	ci left: 6.977441e-07	ci right 3.184480e-06	k: 8	n:4950000
Cons ci ratio: 7.528328e-04	ci left: 8.452972e-01	ci right 8.459340e-01	k: 4185798	n:4950000
KS ci ratio: 1.181923e+00	ci left: 9.687658e-07	ci right 3.715220e-06	k: 10	n:4950000
TMEM90B   4950000 perm   9335 sec   (530 perm/sec)   p_kst 2.020202e-06   p_cons 8.456158e-01   p_joint 1.616162e-06

Joint ci ratio: 1.306665e+00	ci left: 6.963374e-07	ci right 3.178060e-06	k: 8	n:4960000
Cons ci ratio: 7.520782e-04	ci left: 8.452958e-01	ci right 8.459320e-01	k: 4194246	n:4960000
KS ci ratio: 1.181923e+00	ci left: 9.668126e-07	ci right 3.707730e-06	k: 10	n:4960000
TMEM90B   4960000 perm   9372 sec   (529 perm/sec)   p_kst 2.016129e-06   p_cons 8.456141e-01   p_joint 1.612903e-06

Joint ci ratio: 1.306665e+00	ci left: 6.949363e-07	ci right 3.171665e-06	k: 8	n:4970000
Cons ci ratio: 7.513352e-04	ci left: 8.452913e-01	ci right 8.459268e-01	k: 4202678	n:4970000
KS ci ratio: 1.181923e+00	ci left: 9.648673e-07	ci right 3.700270e-06	k: 10	n:4970000
TMEM90B   4970000 perm   9407 sec   (528 perm/sec)   p_kst 2.012072e-06   p_cons 8.456093e-01   p_joint 1.609658e-06

Joint ci ratio: 1.306665e+00	ci left: 6.935408e-07	ci right 3.165297e-06	k: 8	n:4980000
Cons ci ratio: 7.505655e-04	ci left: 8.452968e-01	ci right 8.459317e-01	k: 4211160	n:4980000
KS ci ratio: 1.181923e+00	ci left: 9.629299e-07	ci right 3.692839e-06	k: 10	n:4980000
TMEM90B   4980000 perm   9443 sec   (527 perm/sec)   p_kst 2.008032e-06   p_cons 8.456145e-01   p_joint 1.606426e-06

Joint ci ratio: 1.306665e+00	ci left: 6.921510e-07	ci right 3.158953e-06	k: 8	n:4990000
Cons ci ratio: 7.498178e-04	ci left: 8.452955e-01	ci right 8.459297e-01	k: 4219608	n:4990000
KS ci ratio: 1.181923e+00	ci left: 9.610001e-07	ci right 3.685439e-06	k: 10	n:4990000
TMEM90B   4990000 perm   9479 sec   (526 perm/sec)   p_kst 2.004008e-06   p_cons 8.456128e-01   p_joint 1.603206e-06

Joint ci ratio: 1.306665e+00	ci left: 6.907667e-07	ci right 3.152635e-06	k: 8	n:5000000
Cons ci ratio: 7.490653e-04	ci left: 8.452966e-01	ci right 8.459302e-01	k: 4228068	n:5000000
KS ci ratio: 1.181923e+00	ci left: 9.590781e-07	ci right 3.678068e-06	k: 10	n:5000000
TMEM90B   5000000 perm   9516 sec   (525 perm/sec)   p_kst 2.000000e-06   p_cons 8.456136e-01   p_joint 1.600000e-06

Outputting figure to mutsig2_images.part000000000178/TMEM90B.3_789_5000000_2e-06_0.84561_1.6e-06.png
                gene_name: TMEM90B
               theta_stop: 1.3 
                    nperm: 5000000 
                     p_ks: 2.00e-06 
        ci_ks_bounds_left: 9.59e-07 
       ci_ks_bounds_right: 3.68e-06 
                   p_cons: 0.85 
      ci_cons_bounds_left: 0.85 
     ci_cons_bounds_right: 0.85 
                  p_joint: 1.60e-06 
     ci_joint_bounds_left: 6.91e-07 
    ci_joint_bounds_right: 3.15e-06 

Current progress: 33 percent done.
TMEM49
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.283636e-02	ci left: 5.778774e-01	ci right 5.972716e-01	k: 5876	n:10000
KS ci ratio: 2.375459e-02	ci left: 7.225963e-01	ci right 7.400688e-01	k: 7314	n:10000
TMEM49   10000 perm   1 sec   (7660 perm/sec)   p_kst 7.314000e-01   p_cons 5.876000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000178/TMEM49.2_1265_10000_0.7314_0.5876_1.png
                gene_name: TMEM49
               theta_stop: 0.033 
                    nperm: 10000 
                     p_ks: 0.73 
        ci_ks_bounds_left: 0.72 
       ci_ks_bounds_right: 0.74 
                   p_cons: 0.59 
      ci_cons_bounds_left: 0.58 
     ci_cons_bounds_right: 0.60 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 67 percent done.
TMPRSS15
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.380780e-02	ci left: 2.651762e-01	ci right 2.827556e-01	k: 2739	n:10000
Cons ci ratio: 1.000383e-01	ci left: 1.264020e-01	ci right 1.398125e-01	k: 1330	n:10000
KS ci ratio: 1.338029e-02	ci left: 8.895437e-01	ci right 9.016248e-01	k: 8957	n:10000
TMPRSS15   10000 perm   2 sec   (6623 perm/sec)   p_kst 8.957000e-01   p_cons 1.330000e-01   p_joint 2.739000e-01

Joint ci ratio: 5.863531e-02	ci left: 1.772671e-01	ci right 1.880253e-01	k: 3652	n:20000
Cons ci ratio: 7.164200e-02	ci left: 1.255159e-01	ci right 1.348919e-01	k: 2603	n:20000
KS ci ratio: 9.419466e-03	ci left: 8.921956e-01	ci right 9.006888e-01	k: 17930	n:20000
TMPRSS15   20000 perm   3 sec   (5902 perm/sec)   p_kst 8.965000e-01   p_cons 1.301500e-01   p_joint 1.826000e-01

Outputting figure to mutsig2_images.part000000000178/TMPRSS15.2_3160_20000_0.8965_0.13015_0.1826.png
                gene_name: TMPRSS15
               theta_stop: 0.072 
                    nperm: 20000 
                     p_ks: 0.90 
        ci_ks_bounds_left: 0.89 
       ci_ks_bounds_right: 0.90 
                   p_cons: 0.13 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.13 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.19 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000178
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 178 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1705>
Subject: Job 8704394: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1705>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000179> was used as the working directory.
Started at Thu Nov 15 19:37:24 2012
Results reported at Thu Nov 15 19:39:39 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000179.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000179.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 179  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000179.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    152.84 sec.
    Max Memory :      5787 MB
    Max Swap   :      8426 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
179
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 179
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 179: processing genes 16104 - 16193
Calculating significance of each gene.
Using projection method.
16104	TMPRSS9	1
16105	TMSB10	1
16106	TMSB15A	1
16107	TMSB15B	1
16108	TMSB4X	1
16109	TMSL3	1
16110	TMTC1	1
16111	TMTC2	1
16112	TMTC3	1
16113	TMTC4	2.586522e-01
16114	TMUB1	1
16115	TMUB2	1
16116	TMX1	1
16117	TMX2	8.174883e-02
16118	TMX3	1.450300e-01
16119	TMX4	1
16120	TNC	4.444261e-01
16121	TNF	1
16122	TNFAIP1	1
16123	TNFAIP2	1.281053e-01
16124	TNFAIP3	1
16125	TNFAIP6	1
16126	TNFAIP8	1
16127	TNFAIP8L1	1
16128	TNFAIP8L2	7.277621e-02
16129	TNFAIP8L3	1
16130	TNFRSF10A	1
16131	TNFRSF10B	1
16132	TNFRSF10C	1
16133	TNFRSF10D	1
16134	TNFRSF11A	1
16135	TNFRSF11B	1
16136	TNFRSF12A	1
16137	TNFRSF13B	1
16138	TNFRSF13C	1
16139	TNFRSF14	1
16140	TNFRSF17	1
16141	TNFRSF18	1
16142	TNFRSF19	1
16143	TNFRSF1A	1
16144	TNFRSF1B	1
16145	TNFRSF21	1
16146	TNFRSF25	1
16147	TNFRSF4	1
16148	TNFRSF6B	1
16149	TNFRSF8	1
16150	TNFRSF9	7.564324e-02
16151	TNFSF10	1
16152	TNFSF11	1
16153	TNFSF12	1
16154	TNFSF12-TNFSF13	1
16155	TNFSF13	1
16156	TNFSF13B	1
16157	TNFSF14	1
16158	TNFSF15	1
16159	TNFSF18	1
16160	TNFSF4	1.800221e-02
16161	TNFSF8	1
16162	TNFSF9	1
16163	TNIK	4.029875e-01
16164	TNIP1	2.230552e-01
16165	TNIP2	1.349597e-01
16166	TNIP3	1
16167	TNK1	1
In gene TNK2 the following bins exceed PROBCAP:
    THCA-FY-A3R6-TP	categ 6	N = 2937    n = 1	mu =   1.67e-07
16168	TNK2	2.507275e-01
16169	TNKS	1
16170	TNKS1BP1	1
16171	TNKS2	3.499247e-01
16172	TNMD	1
16173	TNN	3.203010e-01
16174	TNNC1	1
16175	TNNC2	1
16176	TNNI1	1
16177	TNNI2	1
16178	TNNI3	1
16179	TNNI3K	3.830710e-02
16180	TNNT1	1
16181	TNNT2	1
16182	TNNT3	1
16183	TNP1	1
16184	TNP2	1
16185	TNPO1	1
16186	TNPO2	1
16187	TNPO3	2.049990e-01
16188	TNR	2.537041e-02
16189	TNRC18	2.154916e-01
16190	TNRC6A	1
16191	TNRC6B	1.969146e-01
16192	TNRC6C	1
16193	TNS1	2.532763e-02
Done

Running MutSig 2:
Scatter job 179: processing genes 16104 - 16193
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TNR
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.547462e-02	ci left: 5.398854e-01	ci right 5.594856e-01	k: 5497	n:10000
Cons ci ratio: 3.394607e-02	ci left: 5.616310e-01	ci right 5.811274e-01	k: 5714	n:10000
KS ci ratio: 4.904642e-02	ci left: 3.801249e-01	ci right 3.993394e-01	k: 3897	n:10000
TNR   10000 perm   2 sec   (5115 perm/sec)   p_kst 3.897000e-01   p_cons 5.714000e-01   p_joint 5.497000e-01

Outputting figure to mutsig2_images.part000000000179/TNR.3_4161_10000_0.3897_0.5714_0.5497.png
                gene_name: TNR
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.39 
        ci_ks_bounds_left: 0.38 
       ci_ks_bounds_right: 0.40 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.55 
     ci_joint_bounds_left: 0.54 
    ci_joint_bounds_right: 0.56 

Current progress: 33 percent done.
TNS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.136070e-02	ci left: 3.585374e-01	ci right 3.775395e-01	k: 3680	n:10000
Cons ci ratio: 3.909237e-02	ci left: 4.914510e-01	ci right 5.111482e-01	k: 5013	n:10000
KS ci ratio: 5.872968e-02	ci left: 2.990576e-01	ci right 3.172542e-01	k: 3081	n:10000
TNS1   10000 perm   2 sec   (4884 perm/sec)   p_kst 3.081000e-01   p_cons 5.013000e-01   p_joint 3.680000e-01

Outputting figure to mutsig2_images.part000000000179/TNS1.3_5320_10000_0.3081_0.5013_0.368.png
                gene_name: TNS1
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.50 
      ci_cons_bounds_left: 0.49 
     ci_cons_bounds_right: 0.51 
                  p_joint: 0.37 
     ci_joint_bounds_left: 0.36 
    ci_joint_bounds_right: 0.38 

Current progress: 67 percent done.
TNNI3K
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.491176e-02	ci left: 7.033165e-01	ci right 7.211597e-01	k: 7123	n:10000
Cons ci ratio: 6.535019e-02	ci left: 2.558748e-01	ci right 2.732625e-01	k: 2645	n:10000
KS ci ratio: 5.612854e-03	ci left: 9.770621e-01	ci right 9.826535e-01	k: 9800	n:10000
TNNI3K   10000 perm   2 sec   (6104 perm/sec)   p_kst 9.800000e-01   p_cons 2.645000e-01   p_joint 7.123000e-01

Outputting figure to mutsig2_images.part000000000179/TNNI3K.2_2963_10000_0.98_0.2645_0.7123.png
                gene_name: TNNI3K
               theta_stop: 0.065 
                    nperm: 10000 
                     p_ks: 0.98 
        ci_ks_bounds_left: 0.98 
       ci_ks_bounds_right: 0.98 
                   p_cons: 0.26 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.27 
                  p_joint: 0.71 
     ci_joint_bounds_left: 0.70 
    ci_joint_bounds_right: 0.72 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000179
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 179 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1542>
Subject: Job 8704396: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1542>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000180> was used as the working directory.
Started at Thu Nov 15 19:37:24 2012
Results reported at Thu Nov 15 21:21:46 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000180.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000180.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 180  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000180.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   6848.33 sec.
    Max Memory :      6114 MB
    Max Swap   :      8625 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
180
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 180
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 180: processing genes 16194 - 16284
Calculating significance of each gene.
Using projection method.
16194	TNS3	1
16195	TNS4	1
16196	TNXB	7.076378e-01
16197	TOB1	1
16198	TOB2	1
16199	TOE1	1
16200	TOLLIP	1
16201	TOM1	1
16202	TOM1L1	1
16203	TOM1L2	1
16204	TOMM20	1
16205	TOMM20L	6.718269e-02
16206	TOMM22	1
16207	TOMM34	1
16208	TOMM40	1
16209	TOMM40L	1
16210	TOMM5	1
16211	TOMM7	1
16212	TOMM70A	1
16213	TOP1	1
16214	TOP1MT	1
16215	TOP2A	4.680893e-02
16216	TOP2B	1
16217	TOP3A	1
16218	TOP3B	1
16219	TOPBP1	1.377041e-01
16220	TOPORS	1
16221	TOR1A	1
16222	TOR1AIP1	1
16223	TOR1AIP2	2.046026e-01
16224	TOR1B	1
16225	TOR2A	1
16226	TOR3A	1
16227	TOX	1
16228	TOX2	1
16229	TOX3	1
16230	TOX4	1
In gene TP53 the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 1220    n = 1	mu =   2.33e-07
    THCA-EM-A1YB-TP	categ 6	N = 1244    n = 1	mu =   2.41e-07
16231	TP53	1.351416e-03
16232	TP53AIP1	1
16233	TP53BP1	3.580131e-01
16234	TP53BP2	1
16235	TP53I11	1
16236	TP53I13	1
16237	TP53I3	1
16238	TP53INP1	7.202378e-02
16239	TP53INP2	1
16240	TP53RK	1
16241	TP53TG5	1
16242	TP63	1
16243	TP73	2.079645e-03
16244	TPBG	1
16245	TPCN1	1
16246	TPCN2	1
16247	TPD52	1
16248	TPD52L1	1
16249	TPD52L2	1
16250	TPD52L3	1
16251	TPH1	1
16252	TPH2	7.736251e-02
16253	TPI1	1
16254	TPK1	1
16255	TPM1	1
16256	TPM2	1
16257	TPM3	1.211966e-01
16258	TPM4	1
16259	TPMT	1
16260	TPO	1
16261	TPP1	1
16262	TPP2	1
16263	TPPP	1
16264	TPPP2	6.577895e-02
16265	TPPP3	1
16266	TPR	1
16267	TPRA1	1
16268	TPRG1	1.929766e-02
16269	TPRG1L	1
16270	TPRKB	1
16271	TPRN	1
In gene TPRX1 the following bins exceed PROBCAP:
    THCA-BJ-A18Y-TP	categ 6	N = 690     n = 1	mu =   1.74e-07
16272	TPRX1	6.276075e-02
16273	TPSAB1	1
16274	TPSB2	1
16275	TPSD1	1
16276	TPSG1	1
16277	TPST1	1
16278	TPST2	9.315551e-02
16279	TPT1	1
16280	TPTE	1
16281	TPTE2	2.202171e-02
16282	TPX2	1
16283	TRA2A	1
16284	TRA2B	1
Done

Running MutSig 2:
Scatter job 180: processing genes 16194 - 16284
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TP53
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.139402e-02	ci left: 7.621300e-01	ci right 7.787122e-01	k: 7705	n:10000
Cons ci ratio: 1.747133e-02	ci left: 8.268655e-01	ci right 8.415392e-01	k: 8343	n:10000
KS ci ratio: 3.547462e-02	ci left: 5.398854e-01	ci right 5.594856e-01	k: 5497	n:10000
TP53   10000 perm   2 sec   (5820 perm/sec)   p_kst 5.497000e-01   p_cons 8.343000e-01   p_joint 7.705000e-01

Outputting figure to mutsig2_images.part000000000180/TP53.3_1311_10000_0.5497_0.8343_0.7705.png
                gene_name: TP53
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.55 
        ci_ks_bounds_left: 0.54 
       ci_ks_bounds_right: 0.56 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.84 
                  p_joint: 0.77 
     ci_joint_bounds_left: 0.76 
    ci_joint_bounds_right: 0.78 

Current progress: 20 percent done.
TP73
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.800946e-02	ci left: 1.311004e-01	ci right 1.447113e-01	k: 1378	n:10000
Cons ci ratio: 1.738284e-02	ci left: 8.282899e-01	ci right 8.429141e-01	k: 8357	n:10000
KS ci ratio: 1.876749e-01	ci left: 3.786599e-02	ci right 4.580373e-02	k: 417	n:10000
TP73   10000 perm   2 sec   (5669 perm/sec)   p_kst 4.170000e-02   p_cons 8.357000e-01   p_joint 1.378000e-01

Joint ci ratio: 8.537731e-02	ci left: 9.126462e-02	ci right 9.945345e-02	k: 1906	n:20000
Cons ci ratio: 1.282636e-02	ci left: 8.182961e-01	ci right 8.289096e-01	k: 16473	n:20000
KS ci ratio: 1.337139e-01	ci left: 3.843897e-02	ci right 4.399542e-02	k: 823	n:20000
TP73   20000 perm   4 sec   (4972 perm/sec)   p_kst 4.115000e-02   p_cons 8.236500e-01   p_joint 9.530000e-02

Joint ci ratio: 9.060103e-02	ci left: 5.606623e-02	ci right 6.141962e-02	k: 1761	n:30000
Cons ci ratio: 1.038895e-02	ci left: 8.216282e-01	ci right 8.302419e-01	k: 24779	n:30000
KS ci ratio: 1.090858e-01	ci left: 3.901127e-02	ci right 4.354478e-02	k: 1237	n:30000
TP73   30000 perm   6 sec   (4727 perm/sec)   p_kst 4.123333e-02   p_cons 8.259667e-01   p_joint 5.870000e-02

Joint ci ratio: 7.942534e-02	ci left: 5.511567e-02	ci right 5.969885e-02	k: 2295	n:40000
Cons ci ratio: 8.945881e-03	ci left: 8.238621e-01	ci right 8.312903e-01	k: 33104	n:40000
KS ci ratio: 9.539950e-02	ci left: 3.856467e-02	ci right 4.245240e-02	k: 1619	n:40000
TP73   40000 perm   9 sec   (4577 perm/sec)   p_kst 4.047500e-02   p_cons 8.276000e-01   p_joint 5.737500e-02

Outputting figure to mutsig2_images.part000000000180/TP73.3_2006_40000_0.040475_0.8276_0.057375.png
                gene_name: TP73
               theta_stop: 0.095 
                    nperm: 40000 
                     p_ks: 0.040 
        ci_ks_bounds_left: 0.039 
       ci_ks_bounds_right: 0.042 
                   p_cons: 0.83 
      ci_cons_bounds_left: 0.82 
     ci_cons_bounds_right: 0.83 
                  p_joint: 0.057 
     ci_joint_bounds_left: 0.055 
    ci_joint_bounds_right: 0.060 

Current progress: 40 percent done.
TOP2A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.752551e+00	ci left: 1.089969e-04	ci right 1.023839e-03	k: 4	n:10000
Cons ci ratio: 6.528310e-02	ci left: 2.562705e-01	ci right 2.736666e-01	k: 2649	n:10000
KS ci ratio: 1.752551e+00	ci left: 1.089969e-04	ci right 1.023839e-03	k: 4	n:10000
TOP2A   10000 perm   2 sec   (4576 perm/sec)   p_kst 4.000000e-04   p_cons 2.649000e-01   p_joint 4.000000e-04

Joint ci ratio: 9.503118e-01	ci left: 4.573361e-04	ci right 1.298826e-03	k: 16	n:20000
Cons ci ratio: 4.662309e-02	ci left: 2.550227e-01	ci right 2.672468e-01	k: 5222	n:20000
KS ci ratio: 1.306340e+00	ci left: 1.727069e-04	ci right 7.880065e-04	k: 8	n:20000
TOP2A   20000 perm   5 sec   (4128 perm/sec)   p_kst 4.000000e-04   p_cons 2.611000e-01   p_joint 8.000000e-04

Joint ci ratio: 5.653410e-01	ci left: 1.151348e-03	ci right 2.082796e-03	k: 47	n:30000
Cons ci ratio: 3.797747e-02	ci left: 2.570639e-01	ci right 2.670489e-01	k: 7861	n:30000
KS ci ratio: 9.236603e-01	ci left: 3.301378e-04	ci right 9.071337e-04	k: 17	n:30000
TOP2A   30000 perm   8 sec   (3978 perm/sec)   p_kst 5.666667e-04   p_cons 2.620333e-01   p_joint 1.566667e-03

Joint ci ratio: 6.441379e-01	ci left: 6.304261e-04	ci right 1.245764e-03	k: 36	n:40000
Cons ci ratio: 3.287179e-02	ci left: 2.579444e-01	ci right 2.665902e-01	k: 10490	n:40000
KS ci ratio: 8.551789e-01	ci left: 3.054389e-04	ci right 7.721043e-04	k: 20	n:40000
TOP2A   40000 perm   10 sec   (3853 perm/sec)   p_kst 5.000000e-04   p_cons 2.622500e-01   p_joint 9.000000e-04

Joint ci ratio: 5.840902e-01	ci left: 6.394799e-04	ci right 1.181181e-03	k: 44	n:50000
Cons ci ratio: 2.937373e-02	ci left: 2.587667e-01	ci right 2.665009e-01	k: 13131	n:50000
KS ci ratio: 7.837961e-01	ci left: 3.075685e-04	ci right 7.141183e-04	k: 24	n:50000
TOP2A   50000 perm   13 sec   (3763 perm/sec)   p_kst 4.800000e-04   p_cons 2.626200e-01   p_joint 8.800000e-04

Joint ci ratio: 5.100853e-01	ci left: 7.341098e-04	ci right 1.249464e-03	k: 58	n:60000
Cons ci ratio: 2.680106e-02	ci left: 2.592979e-01	ci right 2.663584e-01	k: 15769	n:60000
KS ci ratio: 7.155059e-01	ci left: 3.237191e-04	ci right 6.940741e-04	k: 29	n:60000
TOP2A   60000 perm   16 sec   (3690 perm/sec)   p_kst 4.833333e-04   p_cons 2.628167e-01   p_joint 9.666667e-04

Joint ci ratio: 4.822877e-01	ci left: 7.167227e-04	ci right 1.183390e-03	k: 65	n:70000
Cons ci ratio: 2.479408e-02	ci left: 2.598551e-01	ci right 2.663931e-01	k: 18418	n:70000
KS ci ratio: 6.721064e-01	ci left: 3.245313e-04	ci right 6.619979e-04	k: 33	n:70000
TOP2A   70000 perm   19 sec   (3605 perm/sec)   p_kst 4.714286e-04   p_cons 2.631143e-01   p_joint 9.285714e-04

Joint ci ratio: 4.494384e-01	ci left: 7.374724e-04	ci right 1.175025e-03	k: 75	n:80000
Cons ci ratio: 2.317503e-02	ci left: 2.603625e-01	ci right 2.664796e-01	k: 21073	n:80000
KS ci ratio: 6.442910e-01	ci left: 3.151937e-04	ci right 6.229358e-04	k: 36	n:80000
TOP2A   80000 perm   23 sec   (3543 perm/sec)   p_kst 4.500000e-04   p_cons 2.634125e-01   p_joint 9.375000e-04

Joint ci ratio: 4.107176e-01	ci left: 8.041924e-04	ci right 1.229029e-03	k: 90	n:90000
Cons ci ratio: 2.186795e-02	ci left: 2.602144e-01	ci right 2.659787e-01	k: 23678	n:90000
KS ci ratio: 5.908145e-01	ci left: 3.457911e-04	ci right 6.435102e-04	k: 43	n:90000
TOP2A   90000 perm   26 sec   (3484 perm/sec)   p_kst 4.777778e-04   p_cons 2.630889e-01   p_joint 1.000000e-03

Joint ci ratio: 3.860482e-01	ci left: 8.317623e-04	ci right 1.238075e-03	k: 102	n:100000
Cons ci ratio: 2.081661e-02	ci left: 2.590473e-01	ci right 2.645065e-01	k: 26177	n:100000
KS ci ratio: 5.434621e-01	ci left: 3.797513e-04	ci right 6.705020e-04	k: 51	n:100000
TOP2A   100000 perm   29 sec   (3424 perm/sec)   p_kst 5.100000e-04   p_cons 2.617700e-01   p_joint 1.020000e-03

Joint ci ratio: 4.752207e-01	ci left: 4.720673e-04	ci right 7.734603e-04	k: 67	n:110000
Cons ci ratio: 1.984031e-02	ci left: 2.593217e-01	ci right 2.645273e-01	k: 28811	n:110000
KS ci ratio: 5.236963e-01	ci left: 3.766899e-04	ci right 6.507696e-04	k: 55	n:110000
TOP2A   110000 perm   33 sec   (3373 perm/sec)   p_kst 5.000000e-04   p_cons 2.619182e-01   p_joint 6.090909e-04

Joint ci ratio: 3.299282e-01	ci left: 9.815083e-04	ci right 1.376568e-03	k: 140	n:120000
Cons ci ratio: 1.900354e-02	ci left: 2.592728e-01	ci right 2.642554e-01	k: 31411	n:120000
KS ci ratio: 5.102129e-01	ci left: 3.670351e-04	ci right 6.247762e-04	k: 58	n:120000
TOP2A   120000 perm   36 sec   (3332 perm/sec)   p_kst 4.833333e-04   p_cons 2.617583e-01   p_joint 1.166667e-03

Joint ci ratio: 3.436335e-01	ci left: 8.285326e-04	ci right 1.178956e-03	k: 129	n:130000
Cons ci ratio: 1.827208e-02	ci left: 2.590743e-01	ci right 2.638594e-01	k: 33990	n:130000
KS ci ratio: 4.717855e-01	ci left: 4.062119e-04	ci right 6.630782e-04	k: 68	n:130000
TOP2A   130000 perm   40 sec   (3281 perm/sec)   p_kst 5.230769e-04   p_cons 2.614615e-01   p_joint 9.923077e-04

Joint ci ratio: 2.512489e-01	ci left: 1.517784e-03	ci right 1.960406e-03	k: 242	n:140000
Cons ci ratio: 1.761318e-02	ci left: 2.590356e-01	ci right 2.636457e-01	k: 36587	n:140000
KS ci ratio: 4.437274e-01	ci left: 4.340750e-04	ci right 6.873584e-04	k: 77	n:140000
TOP2A   140000 perm   43 sec   (3238 perm/sec)   p_kst 5.500000e-04   p_cons 2.613357e-01   p_joint 1.728571e-03

Joint ci ratio: 2.903924e-01	ci left: 1.037357e-03	ci right 1.395704e-03	k: 181	n:150000
Cons ci ratio: 1.700022e-02	ci left: 2.594702e-01	ci right 2.639257e-01	k: 39254	n:150000
KS ci ratio: 4.225819e-01	ci left: 4.526575e-04	ci right 7.006451e-04	k: 85	n:150000
TOP2A   150000 perm   47 sec   (3199 perm/sec)   p_kst 5.666667e-04   p_cons 2.616933e-01   p_joint 1.206667e-03

Joint ci ratio: 2.168868e-01	ci left: 1.816582e-03	ci right 2.264270e-03	k: 325	n:160000
Cons ci ratio: 1.647718e-02	ci left: 2.591485e-01	ci right 2.634602e-01	k: 41808	n:160000
KS ci ratio: 3.958573e-01	ci left: 4.916546e-04	ci right 7.395243e-04	k: 97	n:160000
TOP2A   160000 perm   51 sec   (3151 perm/sec)   p_kst 6.062500e-04   p_cons 2.613000e-01   p_joint 2.031250e-03

Joint ci ratio: 2.105253e-01	ci left: 1.821076e-03	ci right 2.255011e-03	k: 345	n:170000
Cons ci ratio: 1.598182e-02	ci left: 2.592948e-01	ci right 2.634780e-01	k: 44435	n:170000
KS ci ratio: 3.899375e-01	ci left: 4.786365e-04	ci right 7.154062e-04	k: 100	n:170000
TOP2A   170000 perm   55 sec   (3112 perm/sec)   p_kst 5.882353e-04   p_cons 2.613824e-01   p_joint 2.029412e-03

Joint ci ratio: 2.063949e-01	ci left: 1.793620e-03	ci right 2.211568e-03	k: 359	n:180000
Cons ci ratio: 1.553353e-02	ci left: 2.593047e-01	ci right 2.633697e-01	k: 47040	n:180000
KS ci ratio: 3.806309e-01	ci left: 4.771329e-04	ci right 7.061172e-04	k: 105	n:180000
TOP2A   180000 perm   59 sec   (3074 perm/sec)   p_kst 5.833333e-04   p_cons 2.613333e-01   p_joint 1.994444e-03

Joint ci ratio: 2.008900e-01	ci left: 1.799116e-03	ci right 2.205793e-03	k: 379	n:190000
Cons ci ratio: 1.510510e-02	ci left: 2.597193e-01	ci right 2.636774e-01	k: 49722	n:190000
KS ci ratio: 3.770940e-01	ci left: 4.615437e-04	ci right 6.804787e-04	k: 107	n:190000
TOP2A   190000 perm   63 sec   (3033 perm/sec)   p_kst 5.631579e-04   p_cons 2.616947e-01   p_joint 1.994737e-03

Joint ci ratio: 1.950718e-01	ci left: 1.818462e-03	ci right 2.216193e-03	k: 402	n:200000
Cons ci ratio: 1.472282e-02	ci left: 2.597646e-01	ci right 2.636223e-01	k: 52338	n:200000
KS ci ratio: 3.686575e-01	ci left: 4.611239e-04	ci right 6.737872e-04	k: 112	n:200000
TOP2A   200000 perm   67 sec   (2983 perm/sec)   p_kst 5.600000e-04   p_cons 2.616900e-01   p_joint 2.010000e-03

Joint ci ratio: 1.871090e-01	ci left: 1.890571e-03	ci right 2.285279e-03	k: 437	n:210000
Cons ci ratio: 1.436127e-02	ci left: 2.599920e-01	ci right 2.637575e-01	k: 54993	n:210000
KS ci ratio: 3.577423e-01	ci left: 4.694581e-04	ci right 6.780634e-04	k: 119	n:210000
TOP2A   210000 perm   71 sec   (2946 perm/sec)   p_kst 5.666667e-04   p_cons 2.618714e-01   p_joint 2.080952e-03

Joint ci ratio: 1.848069e-01	ci left: 1.852305e-03	ci right 2.233733e-03	k: 448	n:220000
Cons ci ratio: 1.403533e-02	ci left: 2.599185e-01	ci right 2.635968e-01	k: 57586	n:220000
KS ci ratio: 3.533549e-01	ci left: 4.605371e-04	ci right 6.620924e-04	k: 122	n:220000
TOP2A   220000 perm   75 sec   (2914 perm/sec)   p_kst 5.545455e-04   p_cons 2.617545e-01   p_joint 2.036364e-03

Joint ci ratio: 1.816014e-01	ci left: 1.838144e-03	ci right 2.209368e-03	k: 464	n:230000
Cons ci ratio: 1.373696e-02	ci left: 2.596745e-01	ci right 2.632706e-01	k: 60138	n:230000
KS ci ratio: 3.410935e-01	ci left: 4.762335e-04	ci right 6.758335e-04	k: 131	n:230000
TOP2A   230000 perm   80 sec   (2881 perm/sec)   p_kst 5.695652e-04   p_cons 2.614696e-01   p_joint 2.017391e-03

Joint ci ratio: 1.776343e-01	ci left: 1.845121e-03	ci right 2.208740e-03	k: 485	n:240000
Cons ci ratio: 1.344030e-02	ci left: 2.599256e-01	ci right 2.634468e-01	k: 62804	n:240000
KS ci ratio: 3.348119e-01	ci left: 4.754560e-04	ci right 6.702685e-04	k: 136	n:240000
TOP2A   240000 perm   84 sec   (2850 perm/sec)   p_kst 5.666667e-04   p_cons 2.616833e-01   p_joint 2.020833e-03

Joint ci ratio: 1.723899e-01	ci left: 1.886064e-03	ci right 2.245636e-03	k: 515	n:250000
Cons ci ratio: 1.315824e-02	ci left: 2.602691e-01	ci right 2.637204e-01	k: 65498	n:250000
KS ci ratio: 3.254432e-01	ci left: 4.857866e-04	ci right 6.780994e-04	k: 144	n:250000
TOP2A   250000 perm   89 sec   (2818 perm/sec)   p_kst 5.760000e-04   p_cons 2.619920e-01   p_joint 2.060000e-03

Joint ci ratio: 1.697793e-01	ci left: 1.872426e-03	ci right 2.223438e-03	k: 531	n:260000
Cons ci ratio: 1.290258e-02	ci left: 2.603067e-01	ci right 2.636909e-01	k: 68119	n:260000
KS ci ratio: 3.199737e-01	ci left: 4.847757e-04	ci right 6.728020e-04	k: 149	n:260000
TOP2A   260000 perm   93 sec   (2788 perm/sec)   p_kst 5.730769e-04   p_cons 2.619962e-01   p_joint 2.042308e-03

Joint ci ratio: 1.656263e-01	ci left: 1.898882e-03	ci right 2.245279e-03	k: 558	n:270000
Cons ci ratio: 1.265739e-02	ci left: 2.604604e-01	ci right 2.637818e-01	k: 70772	n:270000
KS ci ratio: 3.147710e-01	ci left: 4.838646e-04	ci right 6.678721e-04	k: 154	n:270000
TOP2A   270000 perm   98 sec   (2756 perm/sec)   p_kst 5.703704e-04   p_cons 2.621185e-01   p_joint 2.066667e-03

Joint ci ratio: 1.623200e-01	ci left: 1.909838e-03	ci right 2.250600e-03	k: 581	n:280000
Cons ci ratio: 1.243037e-02	ci left: 2.604575e-01	ci right 2.637189e-01	k: 73384	n:280000
KS ci ratio: 3.088499e-01	ci left: 4.863359e-04	ci right 6.671193e-04	k: 160	n:280000
TOP2A   280000 perm   103 sec   (2718 perm/sec)   p_kst 5.714286e-04   p_cons 2.620857e-01   p_joint 2.075000e-03

Joint ci ratio: 1.600011e-01	ci left: 1.900237e-03	ci right 2.233977e-03	k: 598	n:290000
Cons ci ratio: 1.220720e-02	ci left: 2.607066e-01	ci right 2.639120e-01	k: 76069	n:290000
KS ci ratio: 3.041634e-01	ci left: 4.854812e-04	ci right 6.626785e-04	k: 165	n:290000
TOP2A   290000 perm   109 sec   (2665 perm/sec)   p_kst 5.689655e-04   p_cons 2.623069e-01   p_joint 2.062069e-03

Joint ci ratio: 1.568881e-01	ci left: 1.913725e-03	ci right 2.242679e-03	k: 622	n:300000
Cons ci ratio: 1.200327e-02	ci left: 2.606933e-01	ci right 2.638446e-01	k: 78680	n:300000
KS ci ratio: 2.996839e-01	ci left: 4.847028e-04	ci right 6.585147e-04	k: 170	n:300000
TOP2A   300000 perm   114 sec   (2633 perm/sec)   p_kst 5.666667e-04   p_cons 2.622667e-01   p_joint 2.073333e-03

Joint ci ratio: 1.541889e-01	ci left: 1.920198e-03	ci right 2.244062e-03	k: 644	n:310000
Cons ci ratio: 1.181239e-02	ci left: 2.605783e-01	ci right 2.636778e-01	k: 81259	n:310000
KS ci ratio: 2.962400e-01	ci left: 4.810059e-04	ci right 6.511374e-04	k: 174	n:310000
TOP2A   310000 perm   119 sec   (2596 perm/sec)   p_kst 5.612903e-04   p_cons 2.621258e-01   p_joint 2.077419e-03

Joint ci ratio: 1.523125e-01	ci left: 1.908274e-03	ci right 2.225852e-03	k: 660	n:320000
Cons ci ratio: 1.162911e-02	ci left: 2.605114e-01	ci right 2.635617e-01	k: 83851	n:320000
KS ci ratio: 2.896914e-01	ci left: 4.891379e-04	ci right 6.576207e-04	k: 182	n:320000
TOP2A   320000 perm   125 sec   (2569 perm/sec)   p_kst 5.687500e-04   p_cons 2.620344e-01   p_joint 2.062500e-03

Joint ci ratio: 1.501700e-01	ci left: 1.905844e-03	ci right 2.218155e-03	k: 679	n:330000
Cons ci ratio: 1.144531e-02	ci left: 2.607453e-01	ci right 2.637498e-01	k: 86541	n:330000
KS ci ratio: 2.881229e-01	ci left: 4.799367e-04	ci right 6.441919e-04	k: 184	n:330000
TOP2A   330000 perm   130 sec   (2539 perm/sec)   p_kst 5.575758e-04   p_cons 2.622455e-01   p_joint 2.057576e-03

Joint ci ratio: 1.488641e-01	ci left: 1.883762e-03	ci right 2.189531e-03	k: 691	n:340000
Cons ci ratio: 1.126970e-02	ci left: 2.609746e-01	ci right 2.639353e-01	k: 89234	n:340000
KS ci ratio: 2.873493e-01	ci left: 4.685494e-04	ci right 6.283986e-04	k: 185	n:340000
TOP2A   340000 perm   135 sec   (2511 perm/sec)   p_kst 5.441176e-04   p_cons 2.624529e-01   p_joint 2.032353e-03

Joint ci ratio: 1.463471e-01	ci left: 1.895980e-03	ci right 2.198074e-03	k: 715	n:350000
Cons ci ratio: 1.110619e-02	ci left: 2.610429e-01	ci right 2.639611e-01	k: 91875	n:350000
KS ci ratio: 2.806384e-01	ci left: 4.790459e-04	ci right 6.379845e-04	k: 194	n:350000
TOP2A   350000 perm   141 sec   (2484 perm/sec)   p_kst 5.542857e-04   p_cons 2.625000e-01   p_joint 2.042857e-03

Joint ci ratio: 1.445421e-01	ci left: 1.891494e-03	ci right 2.188835e-03	k: 733	n:360000
Cons ci ratio: 1.095117e-02	ci left: 2.610522e-01	ci right 2.639294e-01	k: 94496	n:360000
KS ci ratio: 2.764179e-01	ci left: 4.812419e-04	ci right 6.380903e-04	k: 200	n:360000
TOP2A   360000 perm   147 sec   (2457 perm/sec)   p_kst 5.555556e-04   p_cons 2.624889e-01   p_joint 2.036111e-03

Joint ci ratio: 1.429928e-01	ci left: 1.882059e-03	ci right 2.174476e-03	k: 749	n:370000
Cons ci ratio: 1.079733e-02	ci left: 2.612447e-01	ci right 2.640834e-01	k: 97185	n:370000
KS ci ratio: 2.743789e-01	ci left: 4.757834e-04	ci right 6.295115e-04	k: 203	n:370000
TOP2A   370000 perm   152 sec   (2430 perm/sec)   p_kst 5.486486e-04   p_cons 2.626622e-01   p_joint 2.024324e-03

Joint ci ratio: 1.548209e-01	ci left: 1.553805e-03	ci right 1.817045e-03	k: 639	n:380000
Cons ci ratio: 1.065719e-02	ci left: 2.611593e-01	ci right 2.639601e-01	k: 99772	n:380000
KS ci ratio: 2.730449e-01	ci left: 4.681645e-04	ci right 6.185693e-04	k: 205	n:380000
TOP2A   380000 perm   158 sec   (2406 perm/sec)   p_kst 5.394737e-04   p_cons 2.625579e-01   p_joint 1.681579e-03

Joint ci ratio: 1.400381e-01	ci left: 1.864689e-03	ci right 2.147920e-03	k: 781	n:390000
Cons ci ratio: 1.051797e-02	ci left: 2.612399e-01	ci right 2.640047e-01	k: 102422	n:390000
KS ci ratio: 2.704325e-01	ci left: 4.657179e-04	ci right 6.136622e-04	k: 209	n:390000
TOP2A   390000 perm   164 sec   (2372 perm/sec)   p_kst 5.358974e-04   p_cons 2.626205e-01   p_joint 2.002564e-03

Joint ci ratio: 1.508653e-01	ci left: 1.557865e-03	ci right 1.814440e-03	k: 673	n:400000
Cons ci ratio: 1.038575e-02	ci left: 2.612542e-01	ci right 2.639842e-01	k: 105047	n:400000
KS ci ratio: 2.691550e-01	ci left: 4.587365e-04	ci right 6.036583e-04	k: 211	n:400000
TOP2A   400000 perm   171 sec   (2344 perm/sec)   p_kst 5.275000e-04   p_cons 2.626175e-01   p_joint 1.682500e-03

Joint ci ratio: 1.489979e-01	ci left: 1.559776e-03	ci right 1.813203e-03	k: 690	n:410000
Cons ci ratio: 1.025923e-02	ci left: 2.612365e-01	ci right 2.639328e-01	k: 107659	n:410000
KS ci ratio: 2.660362e-01	ci left: 4.589249e-04	ci right 6.019463e-04	k: 216	n:410000
TOP2A   410000 perm   177 sec   (2320 perm/sec)   p_kst 5.268293e-04   p_cons 2.625829e-01   p_joint 1.682927e-03

Joint ci ratio: 1.467835e-01	ci left: 1.570789e-03	ci right 1.821880e-03	k: 711	n:420000
Cons ci ratio: 1.013928e-02	ci left: 2.611413e-01	ci right 2.638049e-01	k: 110238	n:420000
KS ci ratio: 2.642168e-01	ci left: 4.546661e-04	ci right 5.952309e-04	k: 219	n:420000
TOP2A   420000 perm   183 sec   (2299 perm/sec)   p_kst 5.214286e-04   p_cons 2.624714e-01   p_joint 1.692857e-03

Joint ci ratio: 1.326894e-01	ci left: 1.891151e-03	ci right 2.162141e-03	k: 870	n:430000
Cons ci ratio: 1.002061e-02	ci left: 2.611598e-01	ci right 2.637922e-01	k: 112864	n:430000
KS ci ratio: 2.606857e-01	ci left: 4.571282e-04	ci right 5.962576e-04	k: 225	n:430000
TOP2A   430000 perm   189 sec   (2278 perm/sec)   p_kst 5.232558e-04   p_cons 2.624744e-01   p_joint 2.023256e-03

Joint ci ratio: 1.316366e-01	ci left: 1.878936e-03	ci right 2.145872e-03	k: 884	n:440000
Cons ci ratio: 9.909910e-03	ci left: 2.610256e-01	ci right 2.636275e-01	k: 115423	n:440000
KS ci ratio: 2.584093e-01	ci left: 4.552384e-04	ci right 5.923874e-04	k: 229	n:440000
TOP2A   440000 perm   195 sec   (2257 perm/sec)   p_kst 5.204545e-04   p_cons 2.623250e-01   p_joint 2.009091e-03

Joint ci ratio: 1.300301e-01	ci left: 1.884471e-03	ci right 2.148673e-03	k: 906	n:450000
Cons ci ratio: 9.801054e-03	ci left: 2.609664e-01	ci right 2.635389e-01	k: 118013	n:450000
KS ci ratio: 2.561915e-01	ci left: 4.534376e-04	ci right 5.886843e-04	k: 233	n:450000
TOP2A   450000 perm   201 sec   (2237 perm/sec)   p_kst 5.177778e-04   p_cons 2.622511e-01   p_joint 2.013333e-03

Joint ci ratio: 1.292500e-01	ci left: 1.866641e-03	ci right 2.126653e-03	k: 917	n:460000
Cons ci ratio: 9.690426e-03	ci left: 2.611204e-01	ci right 2.636652e-01	k: 120700	n:460000
KS ci ratio: 2.540298e-01	ci left: 4.517199e-04	ci right 5.851373e-04	k: 237	n:460000
TOP2A   460000 perm   207 sec   (2217 perm/sec)   p_kst 5.152174e-04   p_cons 2.623913e-01   p_joint 1.993478e-03

Joint ci ratio: 1.273217e-01	ci left: 1.884589e-03	ci right 2.142889e-03	k: 945	n:470000
Cons ci ratio: 9.587148e-03	ci left: 2.611193e-01	ci right 2.636368e-01	k: 123317	n:470000
KS ci ratio: 2.483538e-01	ci left: 4.640403e-04	ci right 5.975614e-04	k: 248	n:470000
TOP2A   470000 perm   214 sec   (2198 perm/sec)   p_kst 5.276596e-04   p_cons 2.623766e-01   p_joint 2.010638e-03

Joint ci ratio: 1.340201e-01	ci left: 1.659908e-03	ci right 1.900336e-03	k: 853	n:480000
Cons ci ratio: 9.488788e-03	ci left: 2.610497e-01	ci right 2.635406e-01	k: 125901	n:480000
KS ci ratio: 2.473632e-01	ci left: 4.582805e-04	ci right 5.895375e-04	k: 250	n:480000
TOP2A   480000 perm   220 sec   (2180 perm/sec)   p_kst 5.208333e-04   p_cons 2.622937e-01   p_joint 1.777083e-03

Joint ci ratio: 1.361141e-01	ci left: 1.574759e-03	ci right 1.806707e-03	k: 827	n:490000
Cons ci ratio: 9.390918e-03	ci left: 2.610850e-01	ci right 2.635504e-01	k: 128535	n:490000
KS ci ratio: 2.439840e-01	ci left: 4.623343e-04	ci right 5.926693e-04	k: 257	n:490000
TOP2A   490000 perm   227 sec   (2162 perm/sec)   p_kst 5.244898e-04   p_cons 2.623163e-01   p_joint 1.687755e-03

Joint ci ratio: 1.353814e-01	ci left: 1.560652e-03	ci right 1.789185e-03	k: 836	n:500000
Cons ci ratio: 9.297216e-03	ci left: 2.610691e-01	ci right 2.635096e-01	k: 131144	n:500000
KS ci ratio: 2.421147e-01	ci left: 4.606004e-04	ci right 5.893023e-04	k: 261	n:500000
TOP2A   500000 perm   233 sec   (2143 perm/sec)   p_kst 5.220000e-04   p_cons 2.622880e-01   p_joint 1.672000e-03

Joint ci ratio: 1.339486e-01	ci left: 1.564156e-03	ci right 1.790585e-03	k: 854	n:510000
Cons ci ratio: 9.205144e-03	ci left: 2.611009e-01	ci right 2.635174e-01	k: 133777	n:510000
KS ci ratio: 2.398371e-01	ci left: 4.607810e-04	ci right 5.881421e-04	k: 266	n:510000
TOP2A   510000 perm   240 sec   (2122 perm/sec)   p_kst 5.215686e-04   p_cons 2.623078e-01   p_joint 1.674510e-03

Joint ci ratio: 1.327891e-01	ci left: 1.561960e-03	ci right 1.785959e-03	k: 869	n:520000
Cons ci ratio: 9.115665e-03	ci left: 2.611355e-01	ci right 2.635287e-01	k: 136412	n:520000
KS ci ratio: 2.385014e-01	ci left: 4.573432e-04	ci right 5.829461e-04	k: 269	n:520000
TOP2A   520000 perm   247 sec   (2101 perm/sec)   p_kst 5.173077e-04   p_cons 2.623308e-01   p_joint 1.671154e-03

Joint ci ratio: 1.315847e-01	ci left: 1.561679e-03	ci right 1.783448e-03	k: 885	n:530000
Cons ci ratio: 9.028304e-03	ci left: 2.611877e-01	ci right 2.635583e-01	k: 139057	n:530000
KS ci ratio: 2.358946e-01	ci left: 4.593622e-04	ci right 5.839394e-04	k: 275	n:530000
TOP2A   530000 perm   254 sec   (2084 perm/sec)   p_kst 5.188679e-04   p_cons 2.623717e-01   p_joint 1.669811e-03

Joint ci ratio: 1.301239e-01	ci left: 1.568584e-03	ci right 1.788669e-03	k: 905	n:540000
Cons ci ratio: 8.943708e-03	ci left: 2.612251e-01	ci right 2.635737e-01	k: 141695	n:540000
KS ci ratio: 2.333714e-01	ci left: 4.613135e-04	ci right 5.848887e-04	k: 281	n:540000
TOP2A   540000 perm   261 sec   (2066 perm/sec)   p_kst 5.203704e-04   p_cons 2.623981e-01   p_joint 1.675926e-03

Joint ci ratio: 1.290601e-01	ci left: 1.566453e-03	ci right 1.784305e-03	k: 920	n:550000
Cons ci ratio: 8.862112e-03	ci left: 2.612322e-01	ci right 2.635594e-01	k: 144317	n:550000
KS ci ratio: 2.309275e-01	ci left: 4.632007e-04	ci right 5.857967e-04	k: 287	n:550000
TOP2A   550000 perm   268 sec   (2049 perm/sec)   p_kst 5.218182e-04   p_cons 2.623945e-01   p_joint 1.672727e-03

Joint ci ratio: 1.166504e-01	ci left: 1.895079e-03	ci right 2.131549e-03	k: 1126	n:560000
Cons ci ratio: 8.787046e-03	ci left: 2.610484e-01	ci right 2.633541e-01	k: 146832	n:560000
KS ci ratio: 2.274009e-01	ci left: 4.700784e-04	ci right 5.923282e-04	k: 296	n:560000
TOP2A   560000 perm   276 sec   (2031 perm/sec)   p_kst 5.285714e-04   p_cons 2.622000e-01   p_joint 2.010714e-03

Joint ci ratio: 1.157301e-01	ci left: 1.892493e-03	ci right 2.126650e-03	k: 1144	n:570000
Cons ci ratio: 8.710061e-03	ci left: 2.610392e-01	ci right 2.633246e-01	k: 149443	n:570000
KS ci ratio: 2.262615e-01	ci left: 4.667954e-04	ci right 5.874983e-04	k: 299	n:570000
TOP2A   570000 perm   283 sec   (2015 perm/sec)   p_kst 5.245614e-04   p_cons 2.621807e-01   p_joint 2.007018e-03

Joint ci ratio: 1.145847e-01	ci left: 1.898377e-03	ci right 2.130780e-03	k: 1167	n:580000
Cons ci ratio: 8.633795e-03	ci left: 2.610873e-01	ci right 2.633530e-01	k: 152087	n:580000
KS ci ratio: 2.243993e-01	ci left: 4.668813e-04	ci right 5.864755e-04	k: 304	n:580000
TOP2A   580000 perm   291 sec   (1996 perm/sec)   p_kst 5.241379e-04   p_cons 2.622190e-01   p_joint 2.012069e-03

Joint ci ratio: 1.131873e-01	ci left: 1.913955e-03	ci right 2.145216e-03	k: 1196	n:590000
Cons ci ratio: 8.562310e-03	ci left: 2.610069e-01	ci right 2.632530e-01	k: 154656	n:590000
KS ci ratio: 2.208078e-01	ci left: 4.749725e-04	ci right 5.944275e-04	k: 314	n:590000
TOP2A   590000 perm   298 sec   (1979 perm/sec)   p_kst 5.322034e-04   p_cons 2.621288e-01   p_joint 2.027119e-03

Joint ci ratio: 1.125317e-01	ci left: 1.904729e-03	ci right 2.133455e-03	k: 1210	n:600000
Cons ci ratio: 8.491108e-03	ci left: 2.609959e-01	ci right 2.632231e-01	k: 157265	n:600000
KS ci ratio: 2.204590e-01	ci left: 4.686307e-04	ci right 5.862793e-04	k: 315	n:600000
TOP2A   600000 perm   306 sec   (1964 perm/sec)   p_kst 5.250000e-04   p_cons 2.621083e-01   p_joint 2.016667e-03

Joint ci ratio: 1.117048e-01	ci left: 1.902185e-03	ci right 2.128816e-03	k: 1228	n:610000
Cons ci ratio: 8.420404e-03	ci left: 2.610425e-01	ci right 2.632515e-01	k: 159909	n:610000
KS ci ratio: 2.201117e-01	ci left: 4.624969e-04	ci right 5.783980e-04	k: 316	n:610000
TOP2A   610000 perm   313 sec   (1948 perm/sec)   p_kst 5.180328e-04   p_cons 2.621459e-01   p_joint 2.013115e-03

Joint ci ratio: 1.135259e-01	ci left: 1.810368e-03	ci right 2.029812e-03	k: 1189	n:620000
Cons ci ratio: 8.353979e-03	ci left: 2.609702e-01	ci right 2.631611e-01	k: 162480	n:620000
KS ci ratio: 2.173853e-01	ci left: 4.672337e-04	ci right 5.826779e-04	k: 324	n:620000
TOP2A   620000 perm   321 sec   (1932 perm/sec)   p_kst 5.225806e-04   p_cons 2.620645e-01   p_joint 1.917742e-03

Joint ci ratio: 1.205856e-01	ci left: 1.573603e-03	ci right 1.777055e-03	k: 1054	n:630000
Cons ci ratio: 8.287061e-03	ci left: 2.609953e-01	ci right 2.631688e-01	k: 165111	n:630000
KS ci ratio: 2.160600e-01	ci left: 4.658219e-04	ci right 5.801224e-04	k: 328	n:630000
TOP2A   630000 perm   329 sec   (1916 perm/sec)   p_kst 5.206349e-04   p_cons 2.620810e-01   p_joint 1.673016e-03

Joint ci ratio: 1.200188e-01	ci left: 1.564170e-03	ci right 1.765384e-03	k: 1064	n:640000
Cons ci ratio: 8.220962e-03	ci left: 2.610556e-01	ci right 2.632121e-01	k: 167765	n:640000
KS ci ratio: 2.154068e-01	ci left: 4.614995e-04	ci right 5.743518e-04	k: 330	n:640000
TOP2A   640000 perm   336 sec   (1902 perm/sec)   p_kst 5.156250e-04   p_cons 2.621328e-01   p_joint 1.662500e-03

Joint ci ratio: 1.191273e-01	ci left: 1.563985e-03	ci right 1.763576e-03	k: 1080	n:650000
Cons ci ratio: 8.158139e-03	ci left: 2.610327e-01	ci right 2.631725e-01	k: 170366	n:650000
KS ci ratio: 2.147595e-01	ci left: 4.573105e-04	ci right 5.687581e-04	k: 332	n:650000
TOP2A   650000 perm   344 sec   (1887 perm/sec)   p_kst 5.107692e-04   p_cons 2.621015e-01   p_joint 1.661538e-03

Joint ci ratio: 1.183095e-01	ci left: 1.562340e-03	ci right 1.760257e-03	k: 1095	n:660000
Cons ci ratio: 8.096227e-03	ci left: 2.610348e-01	ci right 2.631582e-01	k: 172983	n:660000
KS ci ratio: 2.128503e-01	ci left: 4.589858e-04	ci right 5.697175e-04	k: 338	n:660000
TOP2A   660000 perm   352 sec   (1873 perm/sec)   p_kst 5.121212e-04   p_cons 2.620955e-01   p_joint 1.659091e-03

Joint ci ratio: 1.092490e-01	ci left: 1.813108e-03	ci right 2.024071e-03	k: 1284	n:670000
Cons ci ratio: 8.034990e-03	ci left: 2.610711e-01	ci right 2.631787e-01	k: 175623	n:670000
KS ci ratio: 2.112978e-01	ci left: 4.592016e-04	ci right 5.690727e-04	k: 343	n:670000
TOP2A   670000 perm   361 sec   (1857 perm/sec)   p_kst 5.119403e-04   p_cons 2.621239e-01   p_joint 1.916418e-03

Joint ci ratio: 1.166712e-01	ci left: 1.560638e-03	ci right 1.755412e-03	k: 1126	n:680000
Cons ci ratio: 7.974546e-03	ci left: 2.611343e-01	ci right 2.632265e-01	k: 178282	n:680000
KS ci ratio: 2.094787e-01	ci left: 4.608073e-04	ci right 5.699917e-04	k: 349	n:680000
TOP2A   680000 perm   369 sec   (1842 perm/sec)   p_kst 5.132353e-04   p_cons 2.621794e-01   p_joint 1.655882e-03

Joint ci ratio: 1.156492e-01	ci left: 1.566163e-03	ci right 1.759798e-03	k: 1146	n:690000
Cons ci ratio: 7.917225e-03	ci left: 2.611089e-01	ci right 2.631858e-01	k: 180881	n:690000
KS ci ratio: 2.065481e-01	ci left: 4.678670e-04	ci right 5.769773e-04	k: 359	n:690000
TOP2A   690000 perm   378 sec   (1828 perm/sec)   p_kst 5.202899e-04   p_cons 2.621464e-01   p_joint 1.660870e-03

Joint ci ratio: 1.147029e-01	ci left: 1.570151e-03	ci right 1.762582e-03	k: 1165	n:700000
Cons ci ratio: 7.861210e-03	ci left: 2.610800e-01	ci right 2.631419e-01	k: 183477	n:700000
KS ci ratio: 2.054103e-01	ci left: 4.666027e-04	ci right 5.747434e-04	k: 363	n:700000
TOP2A   700000 perm   386 sec   (1813 perm/sec)   p_kst 5.185714e-04   p_cons 2.621100e-01   p_joint 1.664286e-03

Joint ci ratio: 1.136355e-01	ci left: 1.578137e-03	ci right 1.769627e-03	k: 1187	n:710000
Cons ci ratio: 7.803184e-03	ci left: 2.612096e-01	ci right 2.632572e-01	k: 186185	n:710000
KS ci ratio: 2.031891e-01	ci left: 4.707222e-04	ci right 5.784915e-04	k: 371	n:710000
TOP2A   710000 perm   395 sec   (1799 perm/sec)   p_kst 5.225352e-04   p_cons 2.622324e-01   p_joint 1.671831e-03

Joint ci ratio: 1.130662e-01	ci left: 1.572413e-03	ci right 1.762188e-03	k: 1199	n:720000
Cons ci ratio: 7.750790e-03	ci left: 2.611177e-01	ci right 2.631508e-01	k: 188736	n:720000
KS ci ratio: 2.010385e-01	ci left: 4.747333e-04	ci right 5.821294e-04	k: 379	n:720000
TOP2A   720000 perm   403 sec   (1786 perm/sec)   p_kst 5.263889e-04   p_cons 2.621333e-01   p_joint 1.665278e-03

Joint ci ratio: 1.122276e-01	ci left: 1.574836e-03	ci right 1.763401e-03	k: 1217	n:730000
Cons ci ratio: 7.699438e-03	ci left: 2.610285e-01	ci right 2.630474e-01	k: 191287	n:730000
KS ci ratio: 2.002500e-01	ci left: 4.721332e-04	ci right 5.784709e-04	k: 382	n:730000
TOP2A   730000 perm   412 sec   (1773 perm/sec)   p_kst 5.232877e-04   p_cons 2.620370e-01   p_joint 1.667123e-03

Joint ci ratio: 1.033444e-01	ci left: 1.840232e-03	ci right 2.042077e-03	k: 1435	n:740000
Cons ci ratio: 7.646767e-03	ci left: 2.610591e-01	ci right 2.630644e-01	k: 193925	n:740000
KS ci ratio: 1.981904e-01	ci left: 4.760247e-04	ci right 5.820030e-04	k: 390	n:740000
TOP2A   740000 perm   420 sec   (1760 perm/sec)   p_kst 5.270270e-04   p_cons 2.620608e-01   p_joint 1.939189e-03

Joint ci ratio: 1.028091e-01	ci left: 1.835180e-03	ci right 2.035365e-03	k: 1450	n:750000
Cons ci ratio: 7.594508e-03	ci left: 2.611223e-01	ci right 2.631142e-01	k: 196588	n:750000
KS ci ratio: 1.969353e-01	ci left: 4.760146e-04	ci right 5.812390e-04	k: 395	n:750000
TOP2A   750000 perm   429 sec   (1747 perm/sec)   p_kst 5.266667e-04   p_cons 2.621173e-01   p_joint 1.933333e-03

Joint ci ratio: 1.066336e-01	ci left: 1.680329e-03	ci right 1.870869e-03	k: 1348	n:760000
Cons ci ratio: 7.544358e-03	ci left: 2.611299e-01	ci right 2.631087e-01	k: 199210	n:760000
KS ci ratio: 1.952172e-01	ci left: 4.785097e-04	ci right 5.832531e-04	k: 402	n:760000
TOP2A   760000 perm   438 sec   (1734 perm/sec)   p_kst 5.289474e-04   p_cons 2.621184e-01   p_joint 1.773684e-03

Joint ci ratio: 1.009805e-01	ci left: 1.854591e-03	ci right 2.053082e-03	k: 1503	n:770000
Cons ci ratio: 7.495037e-03	ci left: 2.611452e-01	ci right 2.631111e-01	k: 201838	n:770000
KS ci ratio: 1.923732e-01	ci left: 4.871238e-04	ci right 5.920177e-04	k: 414	n:770000
TOP2A   770000 perm   447 sec   (1722 perm/sec)   p_kst 5.376623e-04   p_cons 2.621273e-01   p_joint 1.951948e-03

Joint ci ratio: 1.048224e-01	ci left: 1.695908e-03	ci right 1.884746e-03	k: 1395	n:780000
Cons ci ratio: 7.447387e-03	ci left: 2.611230e-01	ci right 2.630762e-01	k: 204437	n:780000
KS ci ratio: 1.909974e-01	ci left: 4.882018e-04	ci right 5.924887e-04	k: 420	n:780000
TOP2A   780000 perm   456 sec   (1710 perm/sec)   p_kst 5.384615e-04   p_cons 2.620987e-01   p_joint 1.788462e-03

Joint ci ratio: 1.041900e-01	ci left: 1.695397e-03	ci right 1.882970e-03	k: 1412	n:790000
Cons ci ratio: 7.400925e-03	ci left: 2.610862e-01	ci right 2.630269e-01	k: 207024	n:790000
KS ci ratio: 1.903208e-01	ci left: 4.856382e-04	ci right 5.889675e-04	k: 423	n:790000
TOP2A   790000 perm   465 sec   (1698 perm/sec)   p_kst 5.354430e-04   p_cons 2.620557e-01   p_joint 1.787342e-03

Joint ci ratio: 1.034964e-01	ci left: 1.697338e-03	ci right 1.883799e-03	k: 1431	n:800000
Cons ci ratio: 7.354989e-03	ci left: 2.610679e-01	ci right 2.629963e-01	k: 209625	n:800000
KS ci ratio: 1.883321e-01	ci left: 4.902846e-04	ci right 5.933878e-04	k: 432	n:800000
TOP2A   800000 perm   475 sec   (1685 perm/sec)   p_kst 5.400000e-04   p_cons 2.620312e-01   p_joint 1.788750e-03

Joint ci ratio: 9.852201e-02	ci left: 1.854493e-03	ci right 2.047862e-03	k: 1579	n:810000
Cons ci ratio: 7.308335e-03	ci left: 2.611327e-01	ci right 2.630493e-01	k: 212293	n:810000
KS ci ratio: 1.868278e-01	ci left: 4.924679e-04	ci right 5.951093e-04	k: 439	n:810000
TOP2A   810000 perm   484 sec   (1674 perm/sec)   p_kst 5.419753e-04   p_cons 2.620901e-01   p_joint 1.949383e-03

Joint ci ratio: 9.781245e-02	ci left: 1.859238e-03	ci right 2.051625e-03	k: 1602	n:820000
Cons ci ratio: 7.264412e-03	ci left: 2.610972e-01	ci right 2.630020e-01	k: 214880	n:820000
KS ci ratio: 1.853590e-01	ci left: 4.946012e-04	ci right 5.967856e-04	k: 446	n:820000
TOP2A   820000 perm   493 sec   (1662 perm/sec)   p_kst 5.439024e-04   p_cons 2.620488e-01   p_joint 1.953659e-03

Joint ci ratio: 9.732813e-02	ci left: 1.855644e-03	ci right 2.046654e-03	k: 1618	n:830000
Cons ci ratio: 7.221114e-03	ci left: 2.610711e-01	ci right 2.629643e-01	k: 217474	n:830000
KS ci ratio: 1.843310e-01	ci left: 4.943875e-04	ci right 5.958980e-04	k: 451	n:830000
TOP2A   830000 perm   503 sec   (1650 perm/sec)   p_kst 5.433735e-04   p_cons 2.620169e-01   p_joint 1.949398e-03

Joint ci ratio: 9.428549e-02	ci left: 1.956725e-03	ci right 2.151496e-03	k: 1724	n:840000
Cons ci ratio: 7.178537e-03	ci left: 2.610480e-01	ci right 2.629298e-01	k: 220070	n:840000
KS ci ratio: 1.835209e-01	ci left: 4.930446e-04	ci right 5.937849e-04	k: 455	n:840000
TOP2A   840000 perm   512 sec   (1639 perm/sec)   p_kst 5.416667e-04   p_cons 2.619881e-01   p_joint 2.052381e-03

Joint ci ratio: 9.614759e-02	ci left: 1.857902e-03	ci right 2.046694e-03	k: 1658	n:850000
Cons ci ratio: 7.136248e-03	ci left: 2.610502e-01	ci right 2.629209e-01	k: 222687	n:850000
KS ci ratio: 1.823252e-01	ci left: 4.939797e-04	ci right 5.941809e-04	k: 461	n:850000
TOP2A   850000 perm   522 sec   (1628 perm/sec)   p_kst 5.423529e-04   p_cons 2.619847e-01   p_joint 1.950588e-03

Joint ci ratio: 9.310538e-02	ci left: 1.961184e-03	ci right 2.153822e-03	k: 1768	n:860000
Cons ci ratio: 7.096362e-03	ci left: 2.609617e-01	ci right 2.628213e-01	k: 225226	n:860000
KS ci ratio: 1.815412e-01	ci left: 4.926750e-04	ci right 5.921346e-04	k: 465	n:860000
TOP2A   860000 perm   532 sec   (1618 perm/sec)   p_kst 5.406977e-04   p_cons 2.618907e-01   p_joint 2.055814e-03

Joint ci ratio: 9.498098e-02	ci left: 1.861192e-03	ci right 2.047896e-03	k: 1699	n:870000
Cons ci ratio: 7.055962e-03	ci left: 2.609396e-01	ci right 2.627884e-01	k: 227821	n:870000
KS ci ratio: 1.803836e-01	ci left: 4.935963e-04	ci right 5.925370e-04	k: 471	n:870000
TOP2A   870000 perm   541 sec   (1607 perm/sec)   p_kst 5.413793e-04   p_cons 2.618632e-01   p_joint 1.952874e-03

Joint ci ratio: 9.442712e-02	ci left: 1.862231e-03	ci right 2.047890e-03	k: 1719	n:880000
Cons ci ratio: 7.015729e-03	ci left: 2.609464e-01	ci right 2.627847e-01	k: 230441	n:880000
KS ci ratio: 1.794357e-01	ci left: 4.934132e-04	ci right 5.917411e-04	k: 476	n:880000
TOP2A   880000 perm   551 sec   (1596 perm/sec)   p_kst 5.409091e-04   p_cons 2.618648e-01   p_joint 1.953409e-03

Joint ci ratio: 9.382883e-02	ci left: 1.865445e-03	ci right 2.050181e-03	k: 1741	n:890000
Cons ci ratio: 6.975122e-03	ci left: 2.610115e-01	ci right 2.628395e-01	k: 233113	n:890000
KS ci ratio: 1.781333e-01	ci left: 4.953824e-04	ci right 5.933090e-04	k: 483	n:890000
TOP2A   890000 perm   561 sec   (1586 perm/sec)   p_kst 5.426966e-04   p_cons 2.619247e-01   p_joint 1.956180e-03

Joint ci ratio: 9.321530e-02	ci left: 1.869675e-03	ci right 2.053554e-03	k: 1764	n:900000
Cons ci ratio: 6.936707e-03	ci left: 2.609919e-01	ci right 2.628097e-01	k: 235710	n:900000
KS ci ratio: 1.768588e-01	ci left: 4.973105e-04	ci right 5.948396e-04	k: 490	n:900000
TOP2A   900000 perm   571 sec   (1576 perm/sec)   p_kst 5.444444e-04   p_cons 2.619000e-01   p_joint 1.960000e-03

Joint ci ratio: 9.263961e-02	ci left: 1.872744e-03	ci right 2.055724e-03	k: 1786	n:910000
Cons ci ratio: 6.898920e-03	ci left: 2.609727e-01	ci right 2.627804e-01	k: 238307	n:910000
KS ci ratio: 1.754351e-01	ci left: 5.002492e-04	ci right 5.974813e-04	k: 498	n:910000
TOP2A   910000 perm   581 sec   (1566 perm/sec)   p_kst 5.472527e-04   p_cons 2.618758e-01   p_joint 1.962637e-03

Joint ci ratio: 9.204897e-02	ci left: 1.876811e-03	ci right 2.058957e-03	k: 1809	n:920000
Cons ci ratio: 6.862438e-03	ci left: 2.609149e-01	ci right 2.627127e-01	k: 240868	n:920000
KS ci ratio: 1.749103e-01	ci left: 4.979296e-04	ci right 5.943907e-04	k: 501	n:920000
TOP2A   920000 perm   591 sec   (1556 perm/sec)   p_kst 5.445652e-04   p_cons 2.618130e-01   p_joint 1.966304e-03

Joint ci ratio: 9.149449e-02	ci left: 1.879743e-03	ci right 2.061016e-03	k: 1831	n:930000
Cons ci ratio: 6.826072e-03	ci left: 2.608842e-01	ci right 2.626721e-01	k: 243453	n:930000
KS ci ratio: 1.743902e-01	ci left: 4.956602e-04	ci right 5.913661e-04	k: 504	n:930000
TOP2A   930000 perm   602 sec   (1546 perm/sec)   p_kst 5.419355e-04   p_cons 2.617774e-01   p_joint 1.968817e-03

Joint ci ratio: 9.072952e-02	ci left: 1.891974e-03	ci right 2.072819e-03	k: 1862	n:940000
Cons ci ratio: 6.791532e-03	ci left: 2.607829e-01	ci right 2.625611e-01	k: 245971	n:940000
KS ci ratio: 1.726884e-01	ci left: 5.005636e-04	ci right 5.961748e-04	k: 514	n:940000
TOP2A   940000 perm   613 sec   (1533 perm/sec)   p_kst 5.468085e-04   p_cons 2.616713e-01   p_joint 1.980851e-03

Joint ci ratio: 9.022239e-02	ci left: 1.893663e-03	ci right 2.073606e-03	k: 1883	n:950000
Cons ci ratio: 6.755650e-03	ci left: 2.607900e-01	ci right 2.625588e-01	k: 248590	n:950000
KS ci ratio: 1.720218e-01	ci left: 4.993234e-04	ci right 5.942913e-04	k: 518	n:950000
TOP2A   950000 perm   624 sec   (1523 perm/sec)   p_kst 5.452632e-04   p_cons 2.616737e-01   p_joint 1.982105e-03

Joint ci ratio: 8.962943e-02	ci left: 1.899394e-03	ci right 2.078632e-03	k: 1908	n:960000
Cons ci ratio: 6.719625e-03	ci left: 2.608376e-01	ci right 2.625972e-01	k: 251248	n:960000
KS ci ratio: 1.708732e-01	ci left: 5.011009e-04	ci right 5.957049e-04	k: 525	n:960000
TOP2A   960000 perm   635 sec   (1512 perm/sec)   p_kst 5.468750e-04   p_cons 2.617167e-01   p_joint 1.987500e-03

Joint ci ratio: 8.893290e-02	ci left: 1.910050e-03	ci right 2.088821e-03	k: 1938	n:970000
Cons ci ratio: 6.684509e-03	ci left: 2.608646e-01	ci right 2.626152e-01	k: 253887	n:970000
KS ci ratio: 1.699069e-01	ci left: 5.018567e-04	ci right 5.960127e-04	k: 531	n:970000
TOP2A   970000 perm   646 sec   (1502 perm/sec)   p_kst 5.474227e-04   p_cons 2.617392e-01   p_joint 1.997938e-03

Joint ci ratio: 8.854572e-02	ci left: 1.907522e-03	ci right 2.085238e-03	k: 1955	n:980000
Cons ci ratio: 6.650746e-03	ci left: 2.608442e-01	ci right 2.625858e-01	k: 256480	n:980000
KS ci ratio: 1.691140e-01	ci left: 5.016213e-04	ci right 5.952493e-04	k: 536	n:980000
TOP2A   980000 perm   657 sec   (1492 perm/sec)   p_kst 5.469388e-04   p_cons 2.617143e-01   p_joint 1.994898e-03

Joint ci ratio: 8.823080e-02	ci left: 1.902082e-03	ci right 2.078629e-03	k: 1969	n:990000
Cons ci ratio: 6.617748e-03	ci left: 2.608091e-01	ci right 2.625418e-01	k: 259058	n:990000
KS ci ratio: 1.684878e-01	ci left: 5.004241e-04	ci right 5.934476e-04	k: 540	n:990000
TOP2A   990000 perm   667 sec   (1483 perm/sec)   p_kst 5.454545e-04   p_cons 2.616747e-01   p_joint 1.988889e-03

Joint ci ratio: 8.776421e-02	ci left: 1.903600e-03	ci right 2.079305e-03	k: 1990	n:1000000
Cons ci ratio: 6.583907e-03	ci left: 2.608527e-01	ci right 2.625767e-01	k: 261714	n:1000000
KS ci ratio: 1.675612e-01	ci left: 5.011676e-04	ci right 5.937652e-04	k: 546	n:1000000
TOP2A   1000000 perm   678 sec   (1474 perm/sec)   p_kst 5.460000e-04   p_cons 2.617140e-01   p_joint 1.990000e-03

Joint ci ratio: 8.726150e-02	ci left: 1.907026e-03	ci right 2.081988e-03	k: 2013	n:1010000
Cons ci ratio: 6.553149e-03	ci left: 2.607440e-01	ci right 2.624593e-01	k: 264217	n:1010000
KS ci ratio: 1.669520e-01	ci left: 5.000001e-04	ci right 5.920124e-04	k: 550	n:1010000
TOP2A   1010000 perm   689 sec   (1466 perm/sec)   p_kst 5.445545e-04   p_cons 2.616010e-01   p_joint 1.993069e-03

Joint ci ratio: 8.672468e-02	ci left: 1.912307e-03	ci right 2.086619e-03	k: 2038	n:1020000
Cons ci ratio: 6.520898e-03	ci left: 2.607512e-01	ci right 2.624580e-01	k: 266836	n:1020000
KS ci ratio: 1.659014e-01	ci left: 5.016751e-04	ci right 5.933566e-04	k: 557	n:1020000
TOP2A   1020000 perm   700 sec   (1457 perm/sec)   p_kst 5.460784e-04   p_cons 2.616039e-01   p_joint 1.998039e-03

Joint ci ratio: 8.613495e-02	ci left: 1.920338e-03	ci right 2.094132e-03	k: 2066	n:1030000
Cons ci ratio: 6.486689e-03	ci left: 2.609027e-01	ci right 2.626015e-01	k: 269604	n:1030000
KS ci ratio: 1.647245e-01	ci left: 5.042502e-04	ci right 5.956838e-04	k: 565	n:1030000
TOP2A   1030000 perm   712 sec   (1448 perm/sec)   p_kst 5.485437e-04   p_cons 2.617515e-01   p_joint 2.005825e-03

Joint ci ratio: 8.576243e-02	ci left: 1.918809e-03	ci right 2.091676e-03	k: 2084	n:1040000
Cons ci ratio: 6.455098e-03	ci left: 2.609265e-01	ci right 2.626172e-01	k: 272242	n:1040000
KS ci ratio: 1.640018e-01	ci left: 5.040116e-04	ci right 5.949614e-04	k: 570	n:1040000
TOP2A   1040000 perm   723 sec   (1438 perm/sec)   p_kst 5.480769e-04   p_cons 2.617712e-01   p_joint 2.003846e-03

Joint ci ratio: 8.537435e-02	ci left: 1.918242e-03	ci right 2.090238e-03	k: 2103	n:1050000
Cons ci ratio: 6.425042e-03	ci left: 2.608851e-01	ci right 2.625676e-01	k: 274812	n:1050000
KS ci ratio: 1.637156e-01	ci left: 5.010381e-04	ci right 5.912780e-04	k: 572	n:1050000
TOP2A   1050000 perm   735 sec   (1429 perm/sec)   p_kst 5.447619e-04   p_cons 2.617257e-01   p_joint 2.002857e-03

Joint ci ratio: 8.507185e-02	ci left: 1.913995e-03	ci right 2.084971e-03	k: 2118	n:1060000
Cons ci ratio: 6.394480e-03	ci left: 2.609002e-01	ci right 2.625747e-01	k: 277441	n:1060000
KS ci ratio: 1.631472e-01	ci left: 4.999305e-04	ci right 5.896277e-04	k: 576	n:1060000
TOP2A   1060000 perm   746 sec   (1421 perm/sec)   p_kst 5.433962e-04   p_cons 2.617368e-01   p_joint 1.998113e-03

Joint ci ratio: 8.457421e-02	ci left: 1.918976e-03	ci right 2.089345e-03	k: 2143	n:1070000
Cons ci ratio: 6.364920e-03	ci left: 2.608804e-01	ci right 2.625471e-01	k: 280033	n:1070000
KS ci ratio: 1.617513e-01	ci left: 5.042242e-04	ci right 5.938425e-04	k: 586	n:1070000
TOP2A   1070000 perm   757 sec   (1413 perm/sec)   p_kst 5.476636e-04   p_cons 2.617131e-01   p_joint 2.002804e-03

Joint ci ratio: 8.431924e-02	ci left: 1.912990e-03	ci right 2.082291e-03	k: 2156	n:1080000
Cons ci ratio: 6.336039e-03	ci left: 2.608444e-01	ci right 2.625032e-01	k: 282607	n:1080000
KS ci ratio: 1.613397e-01	ci left: 5.022209e-04	ci right 5.912340e-04	k: 589	n:1080000
TOP2A   1080000 perm   769 sec   (1404 perm/sec)   p_kst 5.453704e-04   p_cons 2.616731e-01   p_joint 1.996296e-03

Joint ci ratio: 8.391172e-02	ci left: 1.914301e-03	ci right 2.082858e-03	k: 2177	n:1090000
Cons ci ratio: 6.306335e-03	ci left: 2.608832e-01	ci right 2.625345e-01	k: 285262	n:1090000
KS ci ratio: 1.603909e-01	ci left: 5.037769e-04	ci right 5.924901e-04	k: 596	n:1090000
TOP2A   1090000 perm   781 sec   (1396 perm/sec)   p_kst 5.467890e-04   p_cons 2.617083e-01   p_joint 1.997248e-03

Joint ci ratio: 8.343404e-02	ci left: 1.919150e-03	ci right 2.087126e-03	k: 2202	n:1100000
Cons ci ratio: 6.277916e-03	ci left: 2.608678e-01	ci right 2.625116e-01	k: 287858	n:1100000
KS ci ratio: 1.593268e-01	ci left: 5.061790e-04	ci right 5.946672e-04	k: 604	n:1100000
TOP2A   1100000 perm   793 sec   (1388 perm/sec)   p_kst 5.490909e-04   p_cons 2.616891e-01   p_joint 2.001818e-03

Joint ci ratio: 8.326455e-02	ci left: 1.909799e-03	ci right 2.076600e-03	k: 2211	n:1110000
Cons ci ratio: 6.249018e-03	ci left: 2.609059e-01	ci right 2.625422e-01	k: 290513	n:1110000
KS ci ratio: 1.590643e-01	ci left: 5.033487e-04	ci right 5.911834e-04	k: 606	n:1110000
TOP2A   1110000 perm   804 sec   (1380 perm/sec)   p_kst 5.459459e-04   p_cons 2.617234e-01   p_joint 1.991892e-03

Joint ci ratio: 8.289066e-02	ci left: 1.910233e-03	ci right 2.076287e-03	k: 2231	n:1120000
Cons ci ratio: 6.221622e-03	ci left: 2.608745e-01	ci right 2.625035e-01	k: 293091	n:1120000
KS ci ratio: 1.584132e-01	ci left: 5.031415e-04	ci right 5.905465e-04	k: 611	n:1120000
TOP2A   1120000 perm   816 sec   (1372 perm/sec)   p_kst 5.455357e-04   p_cons 2.616884e-01   p_joint 1.991964e-03

Joint ci ratio: 8.237528e-02	ci left: 1.917596e-03	ci right 2.083204e-03	k: 2259	n:1130000
Cons ci ratio: 6.194030e-03	ci left: 2.608782e-01	ci right 2.625000e-01	k: 295708	n:1130000
KS ci ratio: 1.577701e-01	ci left: 5.029387e-04	ci right 5.899201e-04	k: 616	n:1130000
TOP2A   1130000 perm   828 sec   (1364 perm/sec)   p_kst 5.451327e-04   p_cons 2.616885e-01   p_joint 1.999115e-03

Joint ci ratio: 8.201319e-02	ci left: 1.917958e-03	ci right 2.082834e-03	k: 2279	n:1140000
Cons ci ratio: 6.165878e-03	ci left: 2.609397e-01	ci right 2.625545e-01	k: 298391	n:1140000
KS ci ratio: 1.573881e-01	ci left: 5.010547e-04	ci right 5.874807e-04	k: 619	n:1140000
TOP2A   1140000 perm   840 sec   (1356 perm/sec)   p_kst 5.429825e-04   p_cons 2.617465e-01   p_joint 1.999123e-03

Joint ci ratio: 8.154932e-02	ci left: 1.923427e-03	ci right 2.087793e-03	k: 2305	n:1150000
Cons ci ratio: 6.138852e-03	ci left: 2.609533e-01	ci right 2.625610e-01	k: 301020	n:1150000
KS ci ratio: 1.557631e-01	ci left: 5.075593e-04	ci right 5.941189e-04	k: 632	n:1150000
TOP2A   1150000 perm   852 sec   (1349 perm/sec)   p_kst 5.495652e-04   p_cons 2.617565e-01   p_joint 2.004348e-03

Joint ci ratio: 8.097155e-02	ci left: 1.934716e-03	ci right 2.098821e-03	k: 2338	n:1160000
Cons ci ratio: 6.112056e-03	ci left: 2.609743e-01	ci right 2.625751e-01	k: 303658	n:1160000
KS ci ratio: 1.550300e-01	ci left: 5.081551e-04	ci right 5.943705e-04	k: 638	n:1160000
TOP2A   1160000 perm   865 sec   (1341 perm/sec)   p_kst 5.500000e-04   p_cons 2.617741e-01   p_joint 2.015517e-03

Joint ci ratio: 8.061047e-02	ci left: 1.935766e-03	ci right 2.099193e-03	k: 2359	n:1170000
Cons ci ratio: 6.085257e-03	ci left: 2.610172e-01	ci right 2.626113e-01	k: 306322	n:1170000
KS ci ratio: 1.540684e-01	ci left: 5.103851e-04	ci right 5.963922e-04	k: 646	n:1170000
TOP2A   1170000 perm   877 sec   (1334 perm/sec)   p_kst 5.521368e-04   p_cons 2.618137e-01   p_joint 2.016239e-03

Joint ci ratio: 7.831687e-02	ci left: 2.035652e-03	ci right 2.202400e-03	k: 2499	n:1180000
Cons ci ratio: 6.060283e-03	ci left: 2.609655e-01	ci right 2.625526e-01	k: 308875	n:1180000
KS ci ratio: 1.532416e-01	ci left: 5.117639e-04	ci right 5.974981e-04	k: 653	n:1180000
TOP2A   1180000 perm   890 sec   (1325 perm/sec)   p_kst 5.533898e-04   p_cons 2.617585e-01   p_joint 2.117797e-03

Joint ci ratio: 7.802103e-02	ci left: 2.034200e-03	ci right 2.200171e-03	k: 2518	n:1190000
Cons ci ratio: 6.034997e-03	ci left: 2.609541e-01	ci right 2.625345e-01	k: 311475	n:1190000
KS ci ratio: 1.526592e-01	ci left: 5.115043e-04	ci right 5.968395e-04	k: 658	n:1190000
TOP2A   1190000 perm   903 sec   (1318 perm/sec)   p_kst 5.529412e-04   p_cons 2.617437e-01   p_joint 2.115966e-03

Joint ci ratio: 7.766720e-02	ci left: 2.036042e-03	ci right 2.201376e-03	k: 2541	n:1200000
Cons ci ratio: 6.009377e-03	ci left: 2.609845e-01	ci right 2.625584e-01	k: 314125	n:1200000
KS ci ratio: 1.524283e-01	ci left: 5.088447e-04	ci right 5.935961e-04	k: 660	n:1200000
TOP2A   1200000 perm   916 sec   (1311 perm/sec)   p_kst 5.500000e-04   p_cons 2.617708e-01   p_joint 2.117500e-03

Joint ci ratio: 7.945766e-02	ci left: 1.927657e-03	ci right 2.087965e-03	k: 2428	n:1210000
Cons ci ratio: 5.985181e-03	ci left: 2.609434e-01	ci right 2.625107e-01	k: 316689	n:1210000
KS ci ratio: 1.520837e-01	ci left: 5.070242e-04	ci right 5.912641e-04	k: 663	n:1210000
TOP2A   1210000 perm   928 sec   (1304 perm/sec)   p_kst 5.479339e-04   p_cons 2.617264e-01   p_joint 2.006612e-03

Joint ci ratio: 7.919738e-02	ci left: 1.924711e-03	ci right 2.084225e-03	k: 2444	n:1220000
Cons ci ratio: 5.960212e-03	ci left: 2.609718e-01	ci right 2.625326e-01	k: 319337	n:1220000
KS ci ratio: 1.516278e-01	ci left: 5.060224e-04	ci right 5.898209e-04	k: 667	n:1220000
TOP2A   1220000 perm   941 sec   (1297 perm/sec)   p_kst 5.467213e-04   p_cons 2.617516e-01   p_joint 2.003279e-03

Joint ci ratio: 7.890753e-02	ci left: 1.923408e-03	ci right 2.082204e-03	k: 2462	n:1230000
Cons ci ratio: 5.935304e-03	ci left: 2.610159e-01	ci right 2.625705e-01	k: 322005	n:1230000
KS ci ratio: 1.511759e-01	ci left: 5.050372e-04	ci right 5.884008e-04	k: 671	n:1230000
TOP2A   1230000 perm   955 sec   (1288 perm/sec)   p_kst 5.455285e-04   p_cons 2.617927e-01   p_joint 2.001626e-03

Joint ci ratio: 7.850993e-02	ci left: 1.927661e-03	ci right 2.085970e-03	k: 2487	n:1240000
Cons ci ratio: 5.893540e-03	ci left: 2.621842e-01	ci right 2.637347e-01	k: 326069	n:1240000
KS ci ratio: 1.506166e-01	ci left: 5.048443e-04	ci right 5.878400e-04	k: 676	n:1240000
TOP2A   1240000 perm   967 sec   (1282 perm/sec)   p_kst 5.451613e-04   p_cons 2.629589e-01   p_joint 2.005645e-03

Joint ci ratio: 7.616890e-02	ci left: 2.033846e-03	ci right 2.195674e-03	k: 2642	n:1250000
Cons ci ratio: 5.869792e-03	ci left: 2.621956e-01	ci right 2.637399e-01	k: 328709	n:1250000
KS ci ratio: 1.500635e-01	ci left: 5.046551e-04	ci right 5.872877e-04	k: 681	n:1250000
TOP2A   1250000 perm   981 sec   (1275 perm/sec)   p_kst 5.448000e-04   p_cons 2.629672e-01   p_joint 2.113600e-03

Joint ci ratio: 7.582532e-02	ci left: 2.036391e-03	ci right 2.197658e-03	k: 2666	n:1260000
Cons ci ratio: 5.846725e-03	ci left: 2.621807e-01	ci right 2.637188e-01	k: 331316	n:1260000
KS ci ratio: 1.494077e-01	ci left: 5.052334e-04	ci right 5.875668e-04	k: 687	n:1260000
TOP2A   1260000 perm   994 sec   (1267 perm/sec)   p_kst 5.452381e-04   p_cons 2.629492e-01   p_joint 2.115873e-03

Joint ci ratio: 7.557083e-02	ci left: 2.034261e-03	ci right 2.194795e-03	k: 2684	n:1270000
Cons ci ratio: 5.824790e-03	ci left: 2.621086e-01	ci right 2.636405e-01	k: 333850	n:1270000
KS ci ratio: 1.489754e-01	ci left: 5.042872e-04	ci right 5.862074e-04	k: 691	n:1270000
TOP2A   1270000 perm   1008 sec   (1260 perm/sec)   p_kst 5.440945e-04   p_cons 2.628740e-01   p_joint 2.113386e-03

Joint ci ratio: 7.723217e-02	ci left: 1.931003e-03	ci right 2.086889e-03	k: 2570	n:1280000
Cons ci ratio: 5.802516e-03	ci left: 2.620767e-01	ci right 2.636025e-01	k: 336434	n:1280000
KS ci ratio: 1.481215e-01	ci left: 5.063652e-04	ci right 5.881098e-04	k: 699	n:1280000
TOP2A   1280000 perm   1022 sec   (1253 perm/sec)   p_kst 5.460938e-04   p_cons 2.628391e-01   p_joint 2.007813e-03

Joint ci ratio: 7.694840e-02	ci left: 1.930479e-03	ci right 2.085724e-03	k: 2589	n:1290000
Cons ci ratio: 5.779779e-03	ci left: 2.620933e-01	ci right 2.636132e-01	k: 339080	n:1290000
KS ci ratio: 1.471782e-01	ci left: 5.091590e-04	ci right 5.907850e-04	k: 708	n:1290000
TOP2A   1290000 perm   1035 sec   (1246 perm/sec)   p_kst 5.488372e-04   p_cons 2.628527e-01   p_joint 2.006977e-03

Joint ci ratio: 7.663831e-02	ci left: 1.931473e-03	ci right 2.086144e-03	k: 2610	n:1300000
Cons ci ratio: 5.758655e-03	ci left: 2.620189e-01	ci right 2.635329e-01	k: 341608	n:1300000
KS ci ratio: 1.466620e-01	ci left: 5.089471e-04	ci right 5.902280e-04	k: 713	n:1300000
TOP2A   1300000 perm   1049 sec   (1239 perm/sec)   p_kst 5.484615e-04   p_cons 2.627754e-01   p_joint 2.007692e-03

Joint ci ratio: 7.625938e-02	ci left: 1.936197e-03	ci right 2.090446e-03	k: 2636	n:1310000
Cons ci ratio: 5.736133e-03	ci left: 2.620556e-01	ci right 2.635638e-01	k: 344280	n:1310000
KS ci ratio: 1.461512e-01	ci left: 5.087390e-04	ci right 5.896789e-04	k: 718	n:1310000
TOP2A   1310000 perm   1062 sec   (1233 perm/sec)   p_kst 5.480916e-04   p_cons 2.628092e-01   p_joint 2.012214e-03

Joint ci ratio: 7.595751e-02	ci left: 1.937135e-03	ci right 2.090821e-03	k: 2657	n:1320000
Cons ci ratio: 5.714175e-03	ci left: 2.620712e-01	ci right 2.635738e-01	k: 346925	n:1320000
KS ci ratio: 1.453447e-01	ci left: 5.107245e-04	ci right 5.914931e-04	k: 726	n:1320000
TOP2A   1320000 perm   1076 sec   (1226 perm/sec)   p_kst 5.500000e-04   p_cons 2.628220e-01   p_joint 2.012879e-03

Joint ci ratio: 7.564505e-02	ci left: 1.938798e-03	ci right 2.091955e-03	k: 2679	n:1330000
Cons ci ratio: 5.692578e-03	ci left: 2.620791e-01	ci right 2.635760e-01	k: 349560	n:1330000
KS ci ratio: 1.444531e-01	ci left: 5.134062e-04	ci right 5.940578e-04	k: 735	n:1330000
TOP2A   1330000 perm   1091 sec   (1219 perm/sec)   p_kst 5.526316e-04   p_cons 2.628271e-01   p_joint 2.014286e-03

Joint ci ratio: 7.529454e-02	ci left: 1.942634e-03	ci right 2.095352e-03	k: 2704	n:1340000
Cons ci ratio: 5.671781e-03	ci left: 2.620489e-01	ci right 2.635402e-01	k: 352144	n:1340000
KS ci ratio: 1.437709e-01	ci left: 5.146103e-04	ci right 5.950366e-04	k: 742	n:1340000
TOP2A   1340000 perm   1105 sec   (1213 perm/sec)   p_kst 5.537313e-04   p_cons 2.627940e-01   p_joint 2.017910e-03

Joint ci ratio: 7.501773e-02	ci left: 1.942780e-03	ci right 2.094924e-03	k: 2724	n:1350000
Cons ci ratio: 5.651459e-03	ci left: 2.620022e-01	ci right 2.634878e-01	k: 354705	n:1350000
KS ci ratio: 1.431939e-01	ci left: 5.150833e-04	ci right 5.952328e-04	k: 748	n:1350000
TOP2A   1350000 perm   1119 sec   (1206 perm/sec)   p_kst 5.540741e-04   p_cons 2.627444e-01   p_joint 2.017778e-03

Joint ci ratio: 7.467583e-02	ci left: 1.946534e-03	ci right 2.098247e-03	k: 2749	n:1360000
Cons ci ratio: 5.630327e-03	ci left: 2.620266e-01	ci right 2.635068e-01	k: 357362	n:1360000
KS ci ratio: 1.418737e-01	ci left: 5.212231e-04	ci right 6.015169e-04	k: 762	n:1360000
TOP2A   1360000 perm   1133 sec   (1200 perm/sec)   p_kst 5.602941e-04   p_cons 2.627662e-01   p_joint 2.021324e-03

Joint ci ratio: 7.443269e-02	ci left: 1.945219e-03	ci right 2.096315e-03	k: 2767	n:1370000
Cons ci ratio: 5.609854e-03	ci left: 2.620215e-01	ci right 2.634963e-01	k: 359979	n:1370000
KS ci ratio: 1.413191e-01	ci left: 5.216429e-04	ci right 6.016609e-04	k: 768	n:1370000
TOP2A   1370000 perm   1147 sec   (1194 perm/sec)   p_kst 5.605839e-04   p_cons 2.627584e-01   p_joint 2.019708e-03

Joint ci ratio: 7.415191e-02	ci left: 1.946058e-03	ci right 2.096624e-03	k: 2788	n:1380000
Cons ci ratio: 5.589686e-03	ci left: 2.620107e-01	ci right 2.634801e-01	k: 362588	n:1380000
KS ci ratio: 1.407710e-01	ci left: 5.220573e-04	ci right 6.018022e-04	k: 774	n:1380000
TOP2A   1380000 perm   1161 sec   (1188 perm/sec)   p_kst 5.608696e-04   p_cons 2.627449e-01   p_joint 2.020290e-03

Joint ci ratio: 7.387429e-02	ci left: 1.946886e-03	ci right 2.096928e-03	k: 2809	n:1390000
Cons ci ratio: 5.569671e-03	ci left: 2.620044e-01	ci right 2.634685e-01	k: 365203	n:1390000
KS ci ratio: 1.398712e-01	ci left: 5.252432e-04	ci right 6.049192e-04	k: 784	n:1390000
TOP2A   1390000 perm   1176 sec   (1182 perm/sec)   p_kst 5.640288e-04   p_cons 2.627360e-01   p_joint 2.020863e-03

Joint ci ratio: 7.358674e-02	ci left: 1.948404e-03	ci right 2.097953e-03	k: 2831	n:1400000
Cons ci ratio: 5.550004e-03	ci left: 2.619890e-01	ci right 2.634477e-01	k: 367805	n:1400000
KS ci ratio: 1.392517e-01	ci left: 5.263170e-04	ci right 6.057728e-04	k: 791	n:1400000
TOP2A   1400000 perm   1190 sec   (1177 perm/sec)   p_kst 5.650000e-04   p_cons 2.627179e-01   p_joint 2.022143e-03

Joint ci ratio: 7.335405e-02	ci left: 1.947117e-03	ci right 2.096075e-03	k: 2849	n:1410000
Cons ci ratio: 5.529935e-03	ci left: 2.620162e-01	ci right 2.634699e-01	k: 370467	n:1410000
KS ci ratio: 1.385536e-01	ci left: 5.280608e-04	ci right 6.073473e-04	k: 799	n:1410000
TOP2A   1410000 perm   1204 sec   (1171 perm/sec)   p_kst 5.666667e-04   p_cons 2.627426e-01   p_joint 2.020567e-03

Joint ci ratio: 7.313634e-02	ci left: 1.945158e-03	ci right 2.093505e-03	k: 2866	n:1420000
Cons ci ratio: 5.511385e-03	ci left: 2.619516e-01	ci right 2.634000e-01	k: 372999	n:1420000
KS ci ratio: 1.379513e-01	ci left: 5.291012e-04	ci right 6.081702e-04	k: 806	n:1420000
TOP2A   1420000 perm   1219 sec   (1165 perm/sec)   p_kst 5.676056e-04   p_cons 2.626754e-01   p_joint 2.018310e-03

Joint ci ratio: 7.289522e-02	ci left: 1.944599e-03	ci right 2.092394e-03	k: 2885	n:1430000
Cons ci ratio: 5.491771e-03	ci left: 2.619760e-01	ci right 2.634194e-01	k: 375657	n:1430000
KS ci ratio: 1.377808e-01	ci left: 5.267515e-04	ci right 6.053641e-04	k: 808	n:1430000
TOP2A   1430000 perm   1234 sec   (1159 perm/sec)   p_kst 5.650350e-04   p_cons 2.626972e-01   p_joint 2.017483e-03

Joint ci ratio: 7.264395e-02	ci left: 1.944731e-03	ci right 2.092005e-03	k: 2905	n:1440000
Cons ci ratio: 5.473287e-03	ci left: 2.619348e-01	ci right 2.633731e-01	k: 378221	n:1440000
KS ci ratio: 1.372727e-01	ci left: 5.271168e-04	ci right 6.054701e-04	k: 814	n:1440000
TOP2A   1440000 perm   1249 sec   (1153 perm/sec)   p_kst 5.652778e-04   p_cons 2.626535e-01   p_joint 2.017361e-03

Joint ci ratio: 7.245732e-02	ci left: 1.941476e-03	ci right 2.088110e-03	k: 2920	n:1450000
Cons ci ratio: 5.454639e-03	ci left: 2.619190e-01	ci right 2.633523e-01	k: 380821	n:1450000
KS ci ratio: 1.368536e-01	ci left: 5.268115e-04	ci right 6.048609e-04	k: 819	n:1450000
TOP2A   1450000 perm   1264 sec   (1147 perm/sec)   p_kst 5.648276e-04   p_cons 2.626352e-01   p_joint 2.013793e-03

Joint ci ratio: 7.212458e-02	ci left: 1.946338e-03	ci right 2.092635e-03	k: 2947	n:1460000
Cons ci ratio: 5.436824e-03	ci left: 2.618576e-01	ci right 2.632858e-01	k: 383354	n:1460000
KS ci ratio: 1.361085e-01	ci left: 5.291572e-04	ci right 6.070927e-04	k: 828	n:1460000
TOP2A   1460000 perm   1279 sec   (1142 perm/sec)   p_kst 5.671233e-04   p_cons 2.625712e-01   p_joint 2.018493e-03

Joint ci ratio: 7.196625e-02	ci left: 1.941781e-03	ci right 2.087403e-03	k: 2960	n:1470000
Cons ci ratio: 5.418278e-03	ci left: 2.618616e-01	ci right 2.632849e-01	k: 385982	n:1470000
KS ci ratio: 1.359448e-01	ci left: 5.268717e-04	ci right 6.043697e-04	k: 830	n:1470000
TOP2A   1470000 perm   1294 sec   (1136 perm/sec)   p_kst 5.646259e-04   p_cons 2.625728e-01   p_joint 2.013605e-03

Joint ci ratio: 7.174855e-02	ci left: 1.940605e-03	ci right 2.085679e-03	k: 2978	n:1480000
Cons ci ratio: 5.399657e-03	ci left: 2.618844e-01	ci right 2.633030e-01	k: 388638	n:1480000
KS ci ratio: 1.354567e-01	ci left: 5.272282e-04	ci right 6.044777e-04	k: 836	n:1480000
TOP2A   1480000 perm   1309 sec   (1131 perm/sec)   p_kst 5.648649e-04   p_cons 2.625932e-01   p_joint 2.012162e-03

Joint ci ratio: 7.134225e-02	ci left: 1.949991e-03	ci right 2.094908e-03	k: 3012	n:1490000
Cons ci ratio: 5.381553e-03	ci left: 2.618835e-01	ci right 2.632973e-01	k: 391259	n:1490000
KS ci ratio: 1.345750e-01	ci left: 5.308230e-04	ci right 6.080525e-04	k: 847	n:1490000
TOP2A   1490000 perm   1324 sec   (1125 perm/sec)   p_kst 5.684564e-04   p_cons 2.625899e-01   p_joint 2.021477e-03

Joint ci ratio: 7.114191e-02	ci left: 1.948123e-03	ci right 2.092477e-03	k: 3029	n:1500000
Cons ci ratio: 5.363187e-03	ci left: 2.619146e-01	ci right 2.633237e-01	k: 393928	n:1500000
KS ci ratio: 1.343377e-01	ci left: 5.292169e-04	ci right 6.060661e-04	k: 850	n:1500000
TOP2A   1500000 perm   1340 sec   (1119 perm/sec)   p_kst 5.666667e-04   p_cons 2.626187e-01   p_joint 2.019333e-03

Joint ci ratio: 7.093159e-02	ci left: 1.946930e-03	ci right 2.090752e-03	k: 3047	n:1510000
Cons ci ratio: 5.345336e-03	ci left: 2.619214e-01	ci right 2.633259e-01	k: 396561	n:1510000
KS ci ratio: 1.338666e-01	ci left: 5.295523e-04	ci right 6.061591e-04	k: 856	n:1510000
TOP2A   1510000 perm   1356 sec   (1114 perm/sec)   p_kst 5.668874e-04   p_cons 2.626232e-01   p_joint 2.017881e-03

Joint ci ratio: 7.066540e-02	ci left: 1.948985e-03	ci right 2.092397e-03	k: 3070	n:1520000
Cons ci ratio: 5.327961e-03	ci left: 2.619065e-01	ci right 2.633063e-01	k: 399161	n:1520000
KS ci ratio: 1.330154e-01	ci left: 5.330638e-04	ci right 6.096495e-04	k: 867	n:1520000
TOP2A   1520000 perm   1372 sec   (1108 perm/sec)   p_kst 5.703947e-04   p_cons 2.626059e-01   p_joint 2.019737e-03

Joint ci ratio: 7.049358e-02	ci left: 1.945877e-03	ci right 2.088698e-03	k: 3085	n:1530000
Cons ci ratio: 5.310333e-03	ci left: 2.619224e-01	ci right 2.633177e-01	k: 401808	n:1530000
KS ci ratio: 1.324822e-01	ci left: 5.340029e-04	ci right 6.103918e-04	k: 874	n:1530000
TOP2A   1530000 perm   1389 sec   (1102 perm/sec)   p_kst 5.712418e-04   p_cons 2.626196e-01   p_joint 2.016340e-03

Joint ci ratio: 7.020965e-02	ci left: 1.949190e-03	ci right 2.091654e-03	k: 3110	n:1540000
Cons ci ratio: 5.292125e-03	ci left: 2.619934e-01	ci right 2.633842e-01	k: 404540	n:1540000
KS ci ratio: 1.322558e-01	ci left: 5.324189e-04	ci right 6.084408e-04	k: 877	n:1540000
TOP2A   1540000 perm   1405 sec   (1096 perm/sec)   p_kst 5.694805e-04   p_cons 2.626883e-01   p_joint 2.019481e-03

Joint ci ratio: 7.001868e-02	ci left: 1.947390e-03	ci right 2.089320e-03	k: 3127	n:1550000
Cons ci ratio: 5.275447e-03	ci left: 2.619647e-01	ci right 2.633510e-01	k: 407119	n:1550000
KS ci ratio: 1.319557e-01	ci left: 5.314793e-04	ci right 6.071813e-04	k: 881	n:1550000
TOP2A   1550000 perm   1421 sec   (1091 perm/sec)   p_kst 5.683871e-04   p_cons 2.626574e-01   p_joint 2.017419e-03

Joint ci ratio: 6.969614e-02	ci left: 1.953172e-03	ci right 2.094841e-03	k: 3156	n:1560000
Cons ci ratio: 5.258316e-03	ci left: 2.619813e-01	ci right 2.633631e-01	k: 409768	n:1560000
KS ci ratio: 1.315833e-01	ci left: 5.311718e-04	ci right 6.065998e-04	k: 886	n:1560000
TOP2A   1560000 perm   1437 sec   (1086 perm/sec)   p_kst 5.679487e-04   p_cons 2.626718e-01   p_joint 2.023077e-03

Joint ci ratio: 6.947643e-02	ci left: 1.953249e-03	ci right 2.094458e-03	k: 3176	n:1570000
Cons ci ratio: 5.241377e-03	ci left: 2.619958e-01	ci right 2.633732e-01	k: 412414	n:1570000
KS ci ratio: 1.310670e-01	ci left: 5.321007e-04	ci right 6.073411e-04	k: 893	n:1570000
TOP2A   1570000 perm   1453 sec   (1080 perm/sec)   p_kst 5.687898e-04   p_cons 2.626841e-01   p_joint 2.022930e-03

Joint ci ratio: 6.919374e-02	ci left: 1.957057e-03	ci right 2.097943e-03	k: 3202	n:1580000
Cons ci ratio: 5.224883e-03	ci left: 2.619892e-01	ci right 2.633623e-01	k: 415027	n:1580000
KS ci ratio: 1.306294e-01	ci left: 5.324061e-04	ci right 6.074189e-04	k: 899	n:1580000
TOP2A   1580000 perm   1470 sec   (1075 perm/sec)   p_kst 5.689873e-04   p_cons 2.626753e-01   p_joint 2.026582e-03

Joint ci ratio: 6.901092e-02	ci left: 1.955255e-03	ci right 2.095625e-03	k: 3219	n:1590000
Cons ci ratio: 5.207951e-03	ci left: 2.620267e-01	ci right 2.633955e-01	k: 417710	n:1590000
KS ci ratio: 1.301243e-01	ci left: 5.333166e-04	ci right 6.081446e-04	k: 906	n:1590000
TOP2A   1590000 perm   1486 sec   (1070 perm/sec)   p_kst 5.698113e-04   p_cons 2.627107e-01   p_joint 2.024528e-03

Joint ci ratio: 6.881888e-02	ci left: 1.954091e-03	ci right 2.093971e-03	k: 3237	n:1600000
Cons ci ratio: 5.191835e-03	ci left: 2.620151e-01	ci right 2.633795e-01	k: 420315	n:1600000
KS ci ratio: 1.297671e-01	ci left: 5.330068e-04	ci right 6.075703e-04	k: 911	n:1600000
TOP2A   1600000 perm   1503 sec   (1065 perm/sec)   p_kst 5.693750e-04   p_cons 2.626969e-01   p_joint 2.023125e-03

Joint ci ratio: 6.860733e-02	ci left: 1.954163e-03	ci right 2.093601e-03	k: 3257	n:1610000
Cons ci ratio: 5.175711e-03	ci left: 2.620153e-01	ci right 2.633756e-01	k: 422939	n:1610000
KS ci ratio: 1.294129e-01	ci left: 5.327011e-04	ci right 6.070028e-04	k: 916	n:1610000
TOP2A   1610000 perm   1519 sec   (1060 perm/sec)   p_kst 5.689441e-04   p_cons 2.626950e-01   p_joint 2.022981e-03

Joint ci ratio: 6.840818e-02	ci left: 1.953628e-03	ci right 2.092607e-03	k: 3276	n:1620000
Cons ci ratio: 5.160205e-03	ci left: 2.619805e-01	ci right 2.633364e-01	k: 425506	n:1620000
KS ci ratio: 1.289916e-01	ci left: 5.329968e-04	ci right 6.070792e-04	k: 922	n:1620000
TOP2A   1620000 perm   1536 sec   (1054 perm/sec)   p_kst 5.691358e-04   p_cons 2.626580e-01   p_joint 2.022222e-03

Joint ci ratio: 6.821075e-02	ci left: 1.953099e-03	ci right 2.091624e-03	k: 3295	n:1630000
Cons ci ratio: 5.144446e-03	ci left: 2.619755e-01	ci right 2.633272e-01	k: 428121	n:1630000
KS ci ratio: 1.285743e-01	ci left: 5.332893e-04	ci right 6.071543e-04	k: 928	n:1630000
TOP2A   1630000 perm   1553 sec   (1050 perm/sec)   p_kst 5.693252e-04   p_cons 2.626509e-01   p_joint 2.021472e-03

Joint ci ratio: 6.800474e-02	ci left: 1.953178e-03	ci right 2.091273e-03	k: 3315	n:1640000
Cons ci ratio: 5.129098e-03	ci left: 2.619504e-01	ci right 2.632980e-01	k: 430703	n:1640000
KS ci ratio: 1.281611e-01	ci left: 5.335786e-04	ci right 6.072280e-04	k: 934	n:1640000
TOP2A   1640000 perm   1569 sec   (1045 perm/sec)   p_kst 5.695122e-04   p_cons 2.626238e-01   p_joint 2.021341e-03

Joint ci ratio: 6.782096e-02	ci left: 1.952064e-03	ci right 2.089693e-03	k: 3333	n:1650000
Cons ci ratio: 5.113373e-03	ci left: 2.619644e-01	ci right 2.633079e-01	k: 433349	n:1650000
KS ci ratio: 1.278198e-01	ci left: 5.332781e-04	ci right 6.066752e-04	k: 939	n:1650000
TOP2A   1650000 perm   1586 sec   (1041 perm/sec)   p_kst 5.690909e-04   p_cons 2.626358e-01   p_joint 2.020000e-03

Joint ci ratio: 6.756800e-02	ci left: 1.955110e-03	ci right 2.092420e-03	k: 3358	n:1660000
Cons ci ratio: 5.097515e-03	ci left: 2.619993e-01	ci right 2.633389e-01	k: 436030	n:1660000
KS ci ratio: 1.274813e-01	ci left: 5.329814e-04	ci right 6.061287e-04	k: 944	n:1660000
TOP2A   1660000 perm   1602 sec   (1036 perm/sec)   p_kst 5.686747e-04   p_cons 2.626687e-01   p_joint 2.022892e-03

Joint ci ratio: 6.733780e-02	ci left: 1.956943e-03	ci right 2.093895e-03	k: 3381	n:1670000
Cons ci ratio: 5.082196e-03	ci left: 2.620039e-01	ci right 2.633394e-01	k: 438661	n:1670000
KS ci ratio: 1.271454e-01	ci left: 5.326886e-04	ci right 6.055885e-04	k: 949	n:1670000
TOP2A   1670000 perm   1619 sec   (1032 perm/sec)   p_kst 5.682635e-04   p_cons 2.626713e-01   p_joint 2.024551e-03

Joint ci ratio: 6.716926e-02	ci left: 1.955243e-03	ci right 2.091720e-03	k: 3398	n:1680000
Cons ci ratio: 5.067054e-03	ci left: 2.620055e-01	ci right 2.633370e-01	k: 441287	n:1680000
KS ci ratio: 1.266795e-01	ci left: 5.335522e-04	ci right 6.062827e-04	k: 956	n:1680000
TOP2A   1680000 perm   1635 sec   (1028 perm/sec)   p_kst 5.690476e-04   p_cons 2.626708e-01   p_joint 2.022619e-03

Joint ci ratio: 6.695290e-02	ci left: 1.956473e-03	ci right 2.092579e-03	k: 3420	n:1690000
Cons ci ratio: 5.052462e-03	ci left: 2.619751e-01	ci right 2.633026e-01	k: 443859	n:1690000
KS ci ratio: 1.263499e-01	ci left: 5.332600e-04	ci right 6.057474e-04	k: 961	n:1690000
TOP2A   1690000 perm   1652 sec   (1023 perm/sec)   p_kst 5.686391e-04   p_cons 2.626385e-01   p_joint 2.023669e-03

Joint ci ratio: 6.677750e-02	ci left: 1.955376e-03	ci right 2.091035e-03	k: 3438	n:1700000
Cons ci ratio: 5.037568e-03	ci left: 2.619780e-01	ci right 2.633016e-01	k: 446487	n:1700000
KS ci ratio: 1.262189e-01	ci left: 5.312625e-04	ci right 6.033978e-04	k: 963	n:1700000
TOP2A   1700000 perm   1669 sec   (1019 perm/sec)   p_kst 5.664706e-04   p_cons 2.626394e-01   p_joint 2.022353e-03

Joint ci ratio: 6.648793e-02	ci left: 1.961193e-03	ci right 2.096643e-03	k: 3468	n:1710000
Cons ci ratio: 5.022933e-03	ci left: 2.619709e-01	ci right 2.632907e-01	k: 449098	n:1710000
KS ci ratio: 1.256983e-01	ci left: 5.326866e-04	ci right 6.046948e-04	k: 971	n:1710000
TOP2A   1710000 perm   1686 sec   (1015 perm/sec)   p_kst 5.678363e-04   p_cons 2.626304e-01   p_joint 2.028070e-03

Joint ci ratio: 6.628758e-02	ci left: 1.961797e-03	ci right 2.096865e-03	k: 3489	n:1720000
Cons ci ratio: 5.008629e-03	ci left: 2.619483e-01	ci right 2.632641e-01	k: 451682	n:1720000
KS ci ratio: 1.253763e-01	ci left: 5.324053e-04	ci right 6.041774e-04	k: 976	n:1720000
TOP2A   1720000 perm   1703 sec   (1010 perm/sec)   p_kst 5.674419e-04   p_cons 2.626058e-01   p_joint 2.028488e-03

Joint ci ratio: 6.608903e-02	ci left: 1.962395e-03	ci right 2.097084e-03	k: 3510	n:1730000
Cons ci ratio: 4.993693e-03	ci left: 2.619842e-01	ci right 2.632963e-01	k: 454367	n:1730000
KS ci ratio: 1.249930e-01	ci left: 5.326874e-04	ci right 6.042618e-04	k: 982	n:1730000
TOP2A   1730000 perm   1720 sec   (1006 perm/sec)   p_kst 5.676301e-04   p_cons 2.626399e-01   p_joint 2.028902e-03

Joint ci ratio: 6.591096e-02	ci left: 1.961856e-03	ci right 2.096132e-03	k: 3529	n:1740000
Cons ci ratio: 4.978934e-03	ci left: 2.620163e-01	ci right 2.633247e-01	k: 457046	n:1740000
KS ci ratio: 1.246133e-01	ci left: 5.329666e-04	ci right 6.043449e-04	k: 988	n:1740000
TOP2A   1740000 perm   1737 sec   (1002 perm/sec)   p_kst 5.678161e-04   p_cons 2.626701e-01   p_joint 2.028161e-03

Joint ci ratio: 6.568796e-02	ci left: 1.964134e-03	ci right 2.098094e-03	k: 3553	n:1750000
Cons ci ratio: 4.964400e-03	ci left: 2.620406e-01	ci right 2.633453e-01	k: 459712	n:1750000
KS ci ratio: 1.242995e-01	ci left: 5.326893e-04	ci right 6.038375e-04	k: 993	n:1750000
TOP2A   1750000 perm   1754 sec   (998 perm/sec)   p_kst 5.674286e-04   p_cons 2.626926e-01   p_joint 2.030286e-03

Joint ci ratio: 6.543058e-02	ci left: 1.968623e-03	ci right 2.102342e-03	k: 3581	n:1760000
Cons ci ratio: 4.950763e-03	ci left: 2.620045e-01	ci right 2.633054e-01	k: 462272	n:1760000
KS ci ratio: 1.241124e-01	ci left: 5.313142e-04	ci right 6.021641e-04	k: 996	n:1760000
TOP2A   1760000 perm   1772 sec   (993 perm/sec)   p_kst 5.659091e-04   p_cons 2.626545e-01   p_joint 2.034659e-03

Joint ci ratio: 6.521241e-02	ci left: 1.970839e-03	ci right 2.104245e-03	k: 3605	n:1770000
Cons ci ratio: 4.936524e-03	ci left: 2.620247e-01	ci right 2.633219e-01	k: 464931	n:1770000
KS ci ratio: 1.236174e-01	ci left: 5.326922e-04	ci right 6.034218e-04	k: 1004	n:1770000
TOP2A   1770000 perm   1789 sec   (989 perm/sec)   p_kst 5.672316e-04   p_cons 2.626729e-01   p_joint 2.036723e-03

Joint ci ratio: 6.507730e-02	ci left: 1.968056e-03	ci right 2.100988e-03	k: 3620	n:1780000
Cons ci ratio: 4.922600e-03	ci left: 2.620294e-01	ci right 2.633230e-01	k: 467563	n:1780000
KS ci ratio: 1.232500e-01	ci left: 5.329663e-04	ci right 6.035066e-04	k: 1010	n:1780000
TOP2A   1780000 perm   1807 sec   (985 perm/sec)   p_kst 5.674157e-04   p_cons 2.626758e-01   p_joint 2.033708e-03

Joint ci ratio: 6.483590e-02	ci left: 1.971900e-03	ci right 2.104579e-03	k: 3647	n:1790000
Cons ci ratio: 4.908723e-03	ci left: 2.620398e-01	ci right 2.633297e-01	k: 470205	n:1790000
KS ci ratio: 1.227652e-01	ci left: 5.343206e-04	ci right 6.047417e-04	k: 1018	n:1790000
TOP2A   1790000 perm   1824 sec   (981 perm/sec)   p_kst 5.687151e-04   p_cons 2.626844e-01   p_joint 2.037430e-03

Joint ci ratio: 6.467657e-02	ci left: 1.970783e-03	ci right 2.103049e-03	k: 3665	n:1800000
Cons ci ratio: 4.895510e-03	ci left: 2.620067e-01	ci right 2.632930e-01	k: 472769	n:1800000
KS ci ratio: 1.224651e-01	ci left: 5.340447e-04	ci right 6.042450e-04	k: 1023	n:1800000
TOP2A   1800000 perm   1842 sec   (977 perm/sec)   p_kst 5.683333e-04   p_cons 2.626494e-01   p_joint 2.036111e-03

Joint ci ratio: 6.448335e-02	ci left: 1.971854e-03	ci right 2.103781e-03	k: 3687	n:1810000
Cons ci ratio: 4.882055e-03	ci left: 2.620015e-01	ci right 2.632843e-01	k: 475383	n:1810000
KS ci ratio: 1.220486e-01	ci left: 5.348433e-04	ci right 6.048922e-04	k: 1030	n:1810000
TOP2A   1810000 perm   1860 sec   (973 perm/sec)   p_kst 5.690608e-04   p_cons 2.626425e-01   p_joint 2.037017e-03

Joint ci ratio: 6.434400e-02	ci left: 1.969669e-03	ci right 2.101155e-03	k: 3703	n:1820000
Cons ci ratio: 4.868869e-03	ci left: 2.619839e-01	ci right 2.632631e-01	k: 477974	n:1820000
KS ci ratio: 1.215778e-01	ci left: 5.361663e-04	ci right 6.060981e-04	k: 1038	n:1820000
TOP2A   1820000 perm   1878 sec   (969 perm/sec)   p_kst 5.703297e-04   p_cons 2.626231e-01   p_joint 2.034615e-03

Joint ci ratio: 6.419691e-02	ci left: 1.968046e-03	ci right 2.099112e-03	k: 3720	n:1830000
Cons ci ratio: 4.855076e-03	ci left: 2.620232e-01	ci right 2.632989e-01	k: 480669	n:1830000
KS ci ratio: 1.213445e-01	ci left: 5.353558e-04	ci right 6.050383e-04	k: 1042	n:1830000
TOP2A   1830000 perm   1896 sec   (965 perm/sec)   p_kst 5.693989e-04   p_cons 2.626607e-01   p_joint 2.032787e-03

Joint ci ratio: 6.400794e-02	ci left: 1.969115e-03	ci right 2.099852e-03	k: 3742	n:1840000
Cons ci ratio: 4.841903e-03	ci left: 2.620218e-01	ci right 2.632941e-01	k: 483290	n:1840000
KS ci ratio: 1.209393e-01	ci left: 5.361354e-04	ci right 6.056696e-04	k: 1049	n:1840000
TOP2A   1840000 perm   1914 sec   (962 perm/sec)   p_kst 5.701087e-04   p_cons 2.626576e-01   p_joint 2.033696e-03

Joint ci ratio: 6.384612e-02	ci left: 1.968577e-03	ci right 2.098936e-03	k: 3761	n:1850000
Cons ci ratio: 4.828359e-03	ci left: 2.620589e-01	ci right 2.633278e-01	k: 485982	n:1850000
KS ci ratio: 1.208244e-01	ci left: 5.342857e-04	ci right 6.035095e-04	k: 1051	n:1850000
TOP2A   1850000 perm   1931 sec   (958 perm/sec)   p_kst 5.681081e-04   p_cons 2.626930e-01   p_joint 2.032973e-03

Joint ci ratio: 6.362654e-02	ci left: 1.971749e-03	ci right 2.101852e-03	k: 3787	n:1860000
Cons ci ratio: 4.815515e-03	ci left: 2.620483e-01	ci right 2.633137e-01	k: 488586	n:1860000
KS ci ratio: 1.203675e-01	ci left: 5.355845e-04	ci right 6.046956e-04	k: 1059	n:1860000
TOP2A   1860000 perm   1950 sec   (954 perm/sec)   p_kst 5.693548e-04   p_cons 2.626806e-01   p_joint 2.036022e-03

Joint ci ratio: 6.347594e-02	ci left: 1.970678e-03	ci right 2.100391e-03	k: 3805	n:1870000
Cons ci ratio: 4.802554e-03	ci left: 2.620554e-01	ci right 2.633175e-01	k: 491223	n:1870000
KS ci ratio: 1.201411e-01	ci left: 5.347951e-04	ci right 6.036653e-04	k: 1063	n:1870000
TOP2A   1870000 perm   1968 sec   (950 perm/sec)   p_kst 5.684492e-04   p_cons 2.626861e-01   p_joint 2.034759e-03

Joint ci ratio: 6.334301e-02	ci left: 1.968571e-03	ci right 2.097864e-03	k: 3821	n:1880000
Cons ci ratio: 4.789803e-03	ci left: 2.620540e-01	ci right 2.633127e-01	k: 493844	n:1880000
KS ci ratio: 1.199159e-01	ci left: 5.340142e-04	ci right 6.026458e-04	k: 1067	n:1880000
TOP2A   1880000 perm   1986 sec   (946 perm/sec)   p_kst 5.675532e-04   p_cons 2.626830e-01   p_joint 2.032447e-03

Joint ci ratio: 6.313678e-02	ci left: 1.971174e-03	ci right 2.100201e-03	k: 3846	n:1890000
Cons ci ratio: 4.777525e-03	ci left: 2.620224e-01	ci right 2.632778e-01	k: 496408	n:1890000
KS ci ratio: 1.198039e-01	ci left: 5.322152e-04	ci right 6.005471e-04	k: 1069	n:1890000
TOP2A   1890000 perm   2005 sec   (943 perm/sec)   p_kst 5.656085e-04   p_cons 2.626497e-01   p_joint 2.034921e-03

Joint ci ratio: 6.293255e-02	ci left: 1.973750e-03	ci right 2.102512e-03	k: 3871	n:1900000
Cons ci ratio: 4.765542e-03	ci left: 2.619749e-01	ci right 2.632269e-01	k: 498941	n:1900000
KS ci ratio: 1.194694e-01	ci left: 5.324775e-04	ci right 6.006387e-04	k: 1075	n:1900000
TOP2A   1900000 perm   2023 sec   (939 perm/sec)   p_kst 5.657895e-04   p_cons 2.626005e-01   p_joint 2.037368e-03

Joint ci ratio: 6.273835e-02	ci left: 1.975784e-03	ci right 2.104267e-03	k: 3895	n:1910000
Cons ci ratio: 4.753256e-03	ci left: 2.619598e-01	ci right 2.632084e-01	k: 501535	n:1910000
KS ci ratio: 1.193033e-01	ci left: 5.312134e-04	ci right 5.991116e-04	k: 1078	n:1910000
TOP2A   1910000 perm   2041 sec   (936 perm/sec)   p_kst 5.643979e-04   p_cons 2.625838e-01   p_joint 2.039267e-03

Joint ci ratio: 6.252197e-02	ci left: 1.979336e-03	ci right 2.107590e-03	k: 3922	n:1920000
Cons ci ratio: 4.740765e-03	ci left: 2.619693e-01	ci right 2.632147e-01	k: 504176	n:1920000
KS ci ratio: 1.186996e-01	ci left: 5.340053e-04	ci right 6.018908e-04	k: 1089	n:1920000
TOP2A   1920000 perm   2060 sec   (932 perm/sec)   p_kst 5.671875e-04   p_cons 2.625917e-01   p_joint 2.042708e-03

Joint ci ratio: 6.233945e-02	ci left: 1.980811e-03	ci right 2.108773e-03	k: 3945	n:1930000
Cons ci ratio: 4.728447e-03	ci left: 2.619725e-01	ci right 2.632147e-01	k: 506805	n:1930000
KS ci ratio: 1.185367e-01	ci left: 5.327467e-04	ci right 6.003727e-04	k: 1092	n:1930000
TOP2A   1930000 perm   2079 sec   (928 perm/sec)   p_kst 5.658031e-04   p_cons 2.625933e-01   p_joint 2.044041e-03

Joint ci ratio: 6.222926e-02	ci left: 1.977705e-03	ci right 2.105232e-03	k: 3959	n:1940000
Cons ci ratio: 4.715780e-03	ci left: 2.620123e-01	ci right 2.632513e-01	k: 509505	n:1940000
KS ci ratio: 1.182127e-01	ci left: 5.330018e-04	ci right 6.004623e-04	k: 1098	n:1940000
TOP2A   1940000 perm   2098 sec   (925 perm/sec)   p_kst 5.659794e-04   p_cons 2.626314e-01   p_joint 2.040722e-03

Joint ci ratio: 6.213532e-02	ci left: 1.973621e-03	ci right 2.100686e-03	k: 3971	n:1950000
Cons ci ratio: 4.703488e-03	ci left: 2.620291e-01	ci right 2.632649e-01	k: 512161	n:1950000
KS ci ratio: 1.179982e-01	ci left: 5.322592e-04	ci right 5.994949e-04	k: 1102	n:1950000
TOP2A   1950000 perm   2117 sec   (921 perm/sec)   p_kst 5.651282e-04   p_cons 2.626467e-01   p_joint 2.036410e-03

Joint ci ratio: 6.199505e-02	ci left: 1.972593e-03	ci right 2.099294e-03	k: 3989	n:1960000
Cons ci ratio: 4.691588e-03	ci left: 2.620213e-01	ci right 2.632539e-01	k: 514769	n:1960000
KS ci ratio: 1.177849e-01	ci left: 5.315242e-04	ci right 5.985372e-04	k: 1106	n:1960000
TOP2A   1960000 perm   2136 sec   (918 perm/sec)   p_kst 5.642857e-04   p_cons 2.626372e-01   p_joint 2.035204e-03

Joint ci ratio: 6.184026e-02	ci left: 1.972575e-03	ci right 2.098947e-03	k: 4009	n:1970000
Cons ci ratio: 4.680060e-03	ci left: 2.619902e-01	ci right 2.632197e-01	k: 517331	n:1970000
KS ci ratio: 1.176787e-01	ci left: 5.298114e-04	ci right 5.965441e-04	k: 1108	n:1970000
TOP2A   1970000 perm   2154 sec   (914 perm/sec)   p_kst 5.624365e-04   p_cons 2.626046e-01   p_joint 2.035025e-03

Joint ci ratio: 6.170197e-02	ci left: 1.971563e-03	ci right 2.097578e-03	k: 4027	n:1980000
Cons ci ratio: 4.668471e-03	ci left: 2.619715e-01	ci right 2.631979e-01	k: 519917	n:1980000
KS ci ratio: 1.175199e-01	ci left: 5.286061e-04	ci right 5.950910e-04	k: 1111	n:1980000
TOP2A   1980000 perm   2174 sec   (911 perm/sec)   p_kst 5.611111e-04   p_cons 2.625843e-01   p_joint 2.033838e-03

Joint ci ratio: 6.151891e-02	ci left: 1.973530e-03	ci right 2.099283e-03	k: 4051	n:1990000
Cons ci ratio: 4.657045e-03	ci left: 2.619465e-01	ci right 2.631697e-01	k: 522490	n:1990000
KS ci ratio: 1.172566e-01	ci left: 5.283886e-04	ci right 5.946869e-04	k: 1116	n:1990000
TOP2A   1990000 perm   2192 sec   (908 perm/sec)   p_kst 5.608040e-04   p_cons 2.625578e-01   p_joint 2.035678e-03

Joint ci ratio: 6.136010e-02	ci left: 1.974001e-03	ci right 2.099448e-03	k: 4072	n:2000000
Cons ci ratio: 4.645608e-03	ci left: 2.619298e-01	ci right 2.631499e-01	k: 525079	n:2000000
KS ci ratio: 1.168909e-01	ci left: 5.291442e-04	ci right 5.953159e-04	k: 1123	n:2000000
TOP2A   2000000 perm   2212 sec   (904 perm/sec)   p_kst 5.615000e-04   p_cons 2.625395e-01   p_joint 2.036000e-03

Joint ci ratio: 6.123250e-02	ci left: 1.972508e-03	ci right 2.097590e-03	k: 4089	n:2010000
Cons ci ratio: 4.634260e-03	ci left: 2.619127e-01	ci right 2.631298e-01	k: 527667	n:2010000
KS ci ratio: 1.167353e-01	ci left: 5.279605e-04	ci right 5.938903e-04	k: 1126	n:2010000
TOP2A   2010000 perm   2231 sec   (901 perm/sec)   p_kst 5.601990e-04   p_cons 2.625209e-01   p_joint 2.034328e-03

Joint ci ratio: 6.110569e-02	ci left: 1.971030e-03	ci right 2.095751e-03	k: 4106	n:2020000
Cons ci ratio: 4.622924e-03	ci left: 2.619017e-01	ci right 2.631158e-01	k: 530267	n:2020000
KS ci ratio: 1.164772e-01	ci left: 5.277499e-04	ci right 5.934976e-04	k: 1131	n:2020000
TOP2A   2020000 perm   2251 sec   (898 perm/sec)   p_kst 5.599010e-04   p_cons 2.625084e-01   p_joint 2.032673e-03

Joint ci ratio: 6.098708e-02	ci left: 1.969082e-03	ci right 2.093429e-03	k: 4122	n:2030000
Cons ci ratio: 4.611488e-03	ci left: 2.619061e-01	ci right 2.631172e-01	k: 532898	n:2030000
KS ci ratio: 1.162720e-01	ci left: 5.270632e-04	ci right 5.926018e-04	k: 1135	n:2030000
TOP2A   2030000 perm   2270 sec   (894 perm/sec)   p_kst 5.591133e-04   p_cons 2.625113e-01   p_joint 2.030542e-03

Joint ci ratio: 6.081764e-02	ci left: 1.970533e-03	ci right 2.094613e-03	k: 4145	n:2040000
Cons ci ratio: 4.600050e-03	ci left: 2.619179e-01	ci right 2.631259e-01	k: 535544	n:2040000
KS ci ratio: 1.158141e-01	ci left: 5.287633e-04	ci right 5.942366e-04	k: 1144	n:2040000
TOP2A   2040000 perm   2289 sec   (891 perm/sec)   p_kst 5.607843e-04   p_cons 2.625216e-01   p_joint 2.031863e-03

Joint ci ratio: 6.065689e-02	ci left: 1.971489e-03	ci right 2.095290e-03	k: 4167	n:2050000
Cons ci ratio: 4.589205e-03	ci left: 2.618866e-01	ci right 2.630917e-01	k: 538102	n:2050000
KS ci ratio: 1.154115e-01	ci left: 5.299736e-04	ci right 5.953531e-04	k: 1152	n:2050000
TOP2A   2050000 perm   2309 sec   (888 perm/sec)   p_kst 5.619512e-04   p_cons 2.624888e-01   p_joint 2.032683e-03

Joint ci ratio: 6.045406e-02	ci left: 1.975305e-03	ci right 2.098917e-03	k: 4195	n:2060000
Cons ci ratio: 4.578007e-03	ci left: 2.618920e-01	ci right 2.630941e-01	k: 540735	n:2060000
KS ci ratio: 1.146678e-01	ci left: 5.344730e-04	ci right 5.999540e-04	k: 1167	n:2060000
TOP2A   2060000 perm   2329 sec   (885 perm/sec)   p_kst 5.665049e-04   p_cons 2.624927e-01   p_joint 2.036408e-03

Joint ci ratio: 6.031050e-02	ci left: 1.975279e-03	ci right 2.098585e-03	k: 4215	n:2070000
Cons ci ratio: 4.566827e-03	ci left: 2.619026e-01	ci right 2.631019e-01	k: 543379	n:2070000
KS ci ratio: 1.143744e-01	ci left: 5.347066e-04	ci right 6.000372e-04	k: 1173	n:2070000
TOP2A   2070000 perm   2349 sec   (881 perm/sec)   p_kst 5.666667e-04   p_cons 2.625019e-01   p_joint 2.036232e-03

Joint ci ratio: 6.020358e-02	ci left: 1.972885e-03	ci right 2.095816e-03	k: 4230	n:2080000
Cons ci ratio: 4.555604e-03	ci left: 2.619238e-01	ci right 2.631202e-01	k: 546045	n:2080000
KS ci ratio: 1.143745e-01	ci left: 5.321358e-04	ci right 5.971524e-04	k: 1173	n:2080000
TOP2A   2080000 perm   2369 sec   (878 perm/sec)   p_kst 5.639423e-04   p_cons 2.625216e-01   p_joint 2.033654e-03

Joint ci ratio: 6.005472e-02	ci left: 1.973342e-03	ci right 2.095987e-03	k: 4251	n:2090000
Cons ci ratio: 4.544092e-03	ci left: 2.619763e-01	ci right 2.631699e-01	k: 548777	n:2090000
KS ci ratio: 1.141318e-01	ci left: 5.319137e-04	ci right 5.967559e-04	k: 1178	n:2090000
TOP2A   2090000 perm   2389 sec   (875 perm/sec)   p_kst 5.636364e-04   p_cons 2.625727e-01   p_joint 2.033971e-03

Joint ci ratio: 5.991398e-02	ci left: 1.973326e-03	ci right 2.095673e-03	k: 4271	n:2100000
Cons ci ratio: 4.533331e-03	ci left: 2.619716e-01	ci right 2.631624e-01	k: 551390	n:2100000
KS ci ratio: 1.139387e-01	ci left: 5.312312e-04	ci right 5.958733e-04	k: 1182	n:2100000
TOP2A   2100000 perm   2409 sec   (872 perm/sec)   p_kst 5.628571e-04   p_cons 2.625667e-01   p_joint 2.033810e-03

Joint ci ratio: 5.973240e-02	ci left: 1.976112e-03	ci right 2.098247e-03	k: 4297	n:2110000
Cons ci ratio: 4.522679e-03	ci left: 2.619642e-01	ci right 2.631521e-01	k: 553997	n:2110000
KS ci ratio: 1.135553e-01	ci left: 5.323971e-04	ci right 5.969485e-04	k: 1190	n:2110000
TOP2A   2110000 perm   2428 sec   (869 perm/sec)   p_kst 5.639810e-04   p_cons 2.625578e-01   p_joint 2.036493e-03

Joint ci ratio: 5.960083e-02	ci left: 1.975619e-03	ci right 2.097446e-03	k: 4316	n:2120000
Cons ci ratio: 4.511772e-03	ci left: 2.619851e-01	ci right 2.631703e-01	k: 556664	n:2120000
KS ci ratio: 1.132704e-01	ci left: 5.326357e-04	ci right 5.970432e-04	k: 1196	n:2120000
TOP2A   2120000 perm   2449 sec   (866 perm/sec)   p_kst 5.641509e-04   p_cons 2.625774e-01   p_joint 2.035849e-03

Joint ci ratio: 5.947012e-02	ci left: 1.975131e-03	ci right 2.096651e-03	k: 4335	n:2130000
Cons ci ratio: 4.501364e-03	ci left: 2.619697e-01	ci right 2.631521e-01	k: 559254	n:2130000
KS ci ratio: 1.128937e-01	ci left: 5.337847e-04	ci right 5.981022e-04	k: 1204	n:2130000
TOP2A   2130000 perm   2469 sec   (863 perm/sec)   p_kst 5.652582e-04   p_cons 2.625606e-01   p_joint 2.035211e-03

Joint ci ratio: 5.934710e-02	ci left: 1.974188e-03	ci right 2.095390e-03	k: 4353	n:2140000
Cons ci ratio: 4.490838e-03	ci left: 2.619708e-01	ci right 2.631504e-01	k: 561879	n:2140000
KS ci ratio: 1.126602e-01	ci left: 5.335609e-04	ci right 5.977096e-04	k: 1209	n:2140000
TOP2A   2140000 perm   2489 sec   (860 perm/sec)   p_kst 5.649533e-04   p_cons 2.625603e-01   p_joint 2.034112e-03

Joint ci ratio: 5.922484e-02	ci left: 1.973254e-03	ci right 2.094140e-03	k: 4371	n:2150000
Cons ci ratio: 4.480111e-03	ci left: 2.619956e-01	ci right 2.631725e-01	k: 564555	n:2150000
KS ci ratio: 1.122895e-01	ci left: 5.346955e-04	ci right 5.987551e-04	k: 1217	n:2150000
TOP2A   2150000 perm   2510 sec   (856 perm/sec)   p_kst 5.660465e-04   p_cons 2.625837e-01   p_joint 2.033023e-03

Joint ci ratio: 5.904944e-02	ci left: 1.975977e-03	ci right 2.096660e-03	k: 4397	n:2160000
Cons ci ratio: 4.469770e-03	ci left: 2.619934e-01	ci right 2.631675e-01	k: 567173	n:2160000
KS ci ratio: 1.120598e-01	ci left: 5.344700e-04	ci right 5.983629e-04	k: 1222	n:2160000
TOP2A   2160000 perm   2531 sec   (853 perm/sec)   p_kst 5.657407e-04   p_cons 2.625801e-01   p_joint 2.035648e-03

Joint ci ratio: 5.894238e-02	ci left: 1.974136e-03	ci right 2.094480e-03	k: 4413	n:2170000
Cons ci ratio: 4.459219e-03	ci left: 2.620155e-01	ci right 2.631870e-01	k: 569844	n:2170000
KS ci ratio: 1.119684e-01	ci left: 5.329028e-04	ci right 5.965529e-04	k: 1224	n:2170000
TOP2A   2170000 perm   2552 sec   (850 perm/sec)   p_kst 5.640553e-04   p_cons 2.626009e-01   p_joint 2.033641e-03

Joint ci ratio: 5.881595e-02	ci left: 1.973668e-03	ci right 2.093716e-03	k: 4432	n:2180000
Cons ci ratio: 4.448859e-03	ci left: 2.620274e-01	ci right 2.631962e-01	k: 572493	n:2180000
KS ci ratio: 1.118316e-01	ci left: 5.317959e-04	ci right 5.952311e-04	k: 1227	n:2180000
TOP2A   2180000 perm   2572 sec   (848 perm/sec)   p_kst 5.628440e-04   p_cons 2.626115e-01   p_joint 2.033028e-03

Joint ci ratio: 5.869693e-02	ci left: 1.972754e-03	ci right 2.092496e-03	k: 4450	n:2190000
Cons ci ratio: 4.438497e-03	ci left: 2.620456e-01	ci right 2.632117e-01	k: 575156	n:2190000
KS ci ratio: 1.116499e-01	ci left: 5.311430e-04	ci right 5.943907e-04	k: 1231	n:2190000
TOP2A   2190000 perm   2592 sec   (845 perm/sec)   p_kst 5.621005e-04   p_cons 2.626283e-01   p_joint 2.031963e-03

Joint ci ratio: 5.859177e-02	ci left: 1.970953e-03	ci right 2.090364e-03	k: 4466	n:2200000
Cons ci ratio: 4.428368e-03	ci left: 2.620495e-01	ci right 2.632130e-01	k: 577788	n:2200000
KS ci ratio: 1.114241e-01	ci left: 5.309381e-04	ci right 5.940250e-04	k: 1236	n:2200000
TOP2A   2200000 perm   2613 sec   (842 perm/sec)   p_kst 5.618182e-04   p_cons 2.626309e-01   p_joint 2.030000e-03

Joint ci ratio: 5.845452e-02	ci left: 1.971398e-03	ci right 2.090547e-03	k: 4487	n:2210000
Cons ci ratio: 4.418412e-03	ci left: 2.620443e-01	ci right 2.632052e-01	k: 580400	n:2210000
KS ci ratio: 1.111996e-01	ci left: 5.307351e-04	ci right 5.936625e-04	k: 1241	n:2210000
TOP2A   2210000 perm   2634 sec   (839 perm/sec)   p_kst 5.615385e-04   p_cons 2.626244e-01   p_joint 2.030317e-03

Joint ci ratio: 5.829880e-02	ci left: 1.973171e-03	ci right 2.092098e-03	k: 4511	n:2220000
Cons ci ratio: 4.408656e-03	ci left: 2.620275e-01	ci right 2.631857e-01	k: 582986	n:2220000
KS ci ratio: 1.110656e-01	ci left: 5.296581e-04	ci right 5.923773e-04	k: 1244	n:2220000
TOP2A   2220000 perm   2656 sec   (836 perm/sec)   p_kst 5.603604e-04   p_cons 2.626063e-01   p_joint 2.031982e-03

Joint ci ratio: 5.821509e-02	ci left: 1.970067e-03	ci right 2.088631e-03	k: 4524	n:2230000
Cons ci ratio: 4.398475e-03	ci left: 2.620539e-01	ci right 2.632095e-01	k: 585668	n:2230000
KS ci ratio: 1.110211e-01	ci left: 5.277189e-04	ci right 5.901818e-04	k: 1245	n:2230000
TOP2A   2230000 perm   2677 sec   (833 perm/sec)   p_kst 5.582960e-04   p_cons 2.626314e-01   p_joint 2.028700e-03

Joint ci ratio: 5.809328e-02	ci left: 1.969631e-03	ci right 2.087913e-03	k: 4543	n:2240000
Cons ci ratio: 4.388738e-03	ci left: 2.620470e-01	ci right 2.632000e-01	k: 588276	n:2240000
KS ci ratio: 1.109322e-01	ci left: 5.262311e-04	ci right 5.884647e-04	k: 1247	n:2240000
TOP2A   2240000 perm   2698 sec   (830 perm/sec)   p_kst 5.566964e-04   p_cons 2.626232e-01   p_joint 2.028125e-03

Joint ci ratio: 5.793406e-02	ci left: 1.971827e-03	ci right 2.089905e-03	k: 4568	n:2250000
Cons ci ratio: 4.379313e-03	ci left: 2.620184e-01	ci right 2.631688e-01	k: 590835	n:2250000
KS ci ratio: 1.104025e-01	ci left: 5.290781e-04	ci right 5.913302e-04	k: 1259	n:2250000
TOP2A   2250000 perm   2720 sec   (827 perm/sec)   p_kst 5.595556e-04   p_cons 2.625933e-01   p_joint 2.030222e-03

Joint ci ratio: 5.779507e-02	ci left: 1.972696e-03	ci right 2.090533e-03	k: 4590	n:2260000
Cons ci ratio: 4.369523e-03	ci left: 2.620277e-01	ci right 2.631756e-01	k: 593479	n:2260000
KS ci ratio: 1.101406e-01	ci left: 5.293186e-04	ci right 5.914417e-04	k: 1265	n:2260000
TOP2A   2260000 perm   2742 sec   (824 perm/sec)   p_kst 5.597345e-04   p_cons 2.626013e-01   p_joint 2.030973e-03

Joint ci ratio: 5.765706e-02	ci left: 1.973557e-03	ci right 2.091155e-03	k: 4612	n:2270000
Cons ci ratio: 4.359472e-03	ci left: 2.620659e-01	ci right 2.632113e-01	k: 596189	n:2270000
KS ci ratio: 1.100538e-01	ci left: 5.278436e-04	ci right 5.897416e-04	k: 1267	n:2270000
TOP2A   2270000 perm   2763 sec   (822 perm/sec)   p_kst 5.581498e-04   p_cons 2.626383e-01   p_joint 2.031718e-03

Joint ci ratio: 5.754493e-02	ci left: 1.972682e-03	ci right 2.089992e-03	k: 4630	n:2280000
Cons ci ratio: 4.349962e-03	ci left: 2.620618e-01	ci right 2.632046e-01	k: 598803	n:2280000
KS ci ratio: 1.098807e-01	ci left: 5.272346e-04	ci right 5.889577e-04	k: 1271	n:2280000
TOP2A   2280000 perm   2785 sec   (819 perm/sec)   p_kst 5.574561e-04   p_cons 2.626329e-01   p_joint 2.030702e-03

Joint ci ratio: 5.740871e-02	ci left: 1.973537e-03	ci right 2.090610e-03	k: 4652	n:2290000
Cons ci ratio: 4.340485e-03	ci left: 2.620603e-01	ci right 2.632006e-01	k: 601423	n:2290000
KS ci ratio: 1.095367e-01	ci left: 5.283299e-04	ci right 5.899750e-04	k: 1279	n:2290000
TOP2A   2290000 perm   2807 sec   (816 perm/sec)   p_kst 5.585153e-04   p_cons 2.626301e-01   p_joint 2.031441e-03

Joint ci ratio: 5.730416e-02	ci left: 1.972241e-03	ci right 2.089018e-03	k: 4669	n:2300000
Cons ci ratio: 4.330948e-03	ci left: 2.620696e-01	ci right 2.632075e-01	k: 604068	n:2300000
KS ci ratio: 1.093660e-01	ci left: 5.277243e-04	ci right 5.891967e-04	k: 1283	n:2300000
TOP2A   2300000 perm   2829 sec   (813 perm/sec)   p_kst 5.578261e-04   p_cons 2.626383e-01   p_joint 2.030000e-03

Joint ci ratio: 5.713914e-02	ci left: 1.975225e-03	ci right 2.091830e-03	k: 4696	n:2310000
Cons ci ratio: 4.321860e-03	ci left: 2.620443e-01	ci right 2.631797e-01	k: 606633	n:2310000
KS ci ratio: 1.091113e-01	ci left: 5.279663e-04	ci right 5.893144e-04	k: 1289	n:2310000
TOP2A   2310000 perm   2851 sec   (810 perm/sec)   p_kst 5.580087e-04   p_cons 2.626117e-01   p_joint 2.032900e-03

Joint ci ratio: 5.703000e-02	ci left: 1.974359e-03	ci right 2.090683e-03	k: 4714	n:2320000
Cons ci ratio: 4.312334e-03	ci left: 2.620636e-01	ci right 2.631965e-01	k: 609301	n:2320000
KS ci ratio: 1.088165e-01	ci left: 5.286256e-04	ci right 5.898736e-04	k: 1296	n:2320000
TOP2A   2320000 perm   2873 sec   (807 perm/sec)   p_kst 5.586207e-04   p_cons 2.626297e-01   p_joint 2.031897e-03

Joint ci ratio: 5.690943e-02	ci left: 1.974347e-03	ci right 2.090416e-03	k: 4734	n:2330000
Cons ci ratio: 4.302929e-03	ci left: 2.620775e-01	ci right 2.632081e-01	k: 611957	n:2330000
KS ci ratio: 1.085656e-01	ci left: 5.288619e-04	ci right 5.899871e-04	k: 1302	n:2330000
TOP2A   2330000 perm   2895 sec   (805 perm/sec)   p_kst 5.587983e-04   p_cons 2.626425e-01   p_joint 2.031760e-03

Joint ci ratio: 5.680759e-02	ci left: 1.973071e-03	ci right 2.088851e-03	k: 4751	n:2340000
Cons ci ratio: 4.293371e-03	ci left: 2.621106e-01	ci right 2.632387e-01	k: 614658	n:2340000
KS ci ratio: 1.085241e-01	ci left: 5.270175e-04	ci right 5.879047e-04	k: 1303	n:2340000
TOP2A   2340000 perm   2918 sec   (802 perm/sec)   p_kst 5.568376e-04   p_cons 2.626744e-01   p_joint 2.030342e-03

Joint ci ratio: 5.673013e-02	ci left: 1.970128e-03	ci right 2.085573e-03	k: 4764	n:2350000
Cons ci ratio: 4.283779e-03	ci left: 2.621523e-01	ci right 2.632781e-01	k: 617380	n:2350000
KS ci ratio: 1.083995e-01	ci left: 5.260168e-04	ci right 5.867143e-04	k: 1306	n:2350000
TOP2A   2350000 perm   2940 sec   (799 perm/sec)   p_kst 5.557447e-04   p_cons 2.627149e-01   p_joint 2.027234e-03

Joint ci ratio: 5.661145e-02	ci left: 1.970135e-03	ci right 2.085330e-03	k: 4784	n:2360000
Cons ci ratio: 4.274834e-03	ci left: 2.621407e-01	ci right 2.632641e-01	k: 619977	n:2360000
KS ci ratio: 1.081928e-01	ci left: 5.258492e-04	ci right 5.864042e-04	k: 1311	n:2360000
TOP2A   2360000 perm   2963 sec   (797 perm/sec)   p_kst 5.555085e-04   p_cons 2.627021e-01   p_joint 2.027119e-03

Joint ci ratio: 5.644645e-02	ci left: 1.973469e-03	ci right 2.088512e-03	k: 4812	n:2370000
Cons ci ratio: 4.266196e-03	ci left: 2.621065e-01	ci right 2.632275e-01	k: 622520	n:2370000
KS ci ratio: 1.077827e-01	ci left: 5.277359e-04	ci right 5.882632e-04	k: 1321	n:2370000
TOP2A   2370000 perm   2985 sec   (794 perm/sec)   p_kst 5.573840e-04   p_cons 2.626667e-01   p_joint 2.030380e-03

Joint ci ratio: 5.635291e-02	ci left: 1.971805e-03	ci right 2.086555e-03	k: 4828	n:2380000
Cons ci ratio: 4.257204e-03	ci left: 2.621095e-01	ci right 2.632281e-01	k: 625151	n:2380000
KS ci ratio: 1.076607e-01	ci left: 5.267451e-04	ci right 5.870860e-04	k: 1324	n:2380000
TOP2A   2380000 perm   3007 sec   (791 perm/sec)   p_kst 5.563025e-04   p_cons 2.626685e-01   p_joint 2.028571e-03

Joint ci ratio: 5.620755e-02	ci left: 1.973868e-03	ci right 2.088432e-03	k: 4853	n:2390000
Cons ci ratio: 4.248141e-03	ci left: 2.621241e-01	ci right 2.632405e-01	k: 627810	n:2390000
KS ci ratio: 1.074986e-01	ci left: 5.261697e-04	ci right 5.863482e-04	k: 1328	n:2390000
TOP2A   2390000 perm   3030 sec   (789 perm/sec)   p_kst 5.556485e-04   p_cons 2.626820e-01   p_joint 2.030544e-03

Joint ci ratio: 5.607482e-02	ci left: 1.975092e-03	ci right 2.089448e-03	k: 4876	n:2400000
Cons ci ratio: 4.239271e-03	ci left: 2.621262e-01	ci right 2.632402e-01	k: 630439	n:2400000
KS ci ratio: 1.072567e-01	ci left: 5.264102e-04	ci right 5.864722e-04	k: 1334	n:2400000
TOP2A   2400000 perm   3053 sec   (786 perm/sec)   p_kst 5.558333e-04   p_cons 2.626829e-01   p_joint 2.031667e-03

Joint ci ratio: 5.600032e-02	ci left: 1.972216e-03	ci right 2.086248e-03	k: 4889	n:2410000
Cons ci ratio: 4.230566e-03	ci left: 2.621183e-01	ci right 2.632300e-01	k: 633044	n:2410000
KS ci ratio: 1.071365e-01	ci left: 5.254374e-04	ci right 5.853169e-04	k: 1337	n:2410000
TOP2A   2410000 perm   3076 sec   (783 perm/sec)   p_kst 5.547718e-04   p_cons 2.626739e-01   p_joint 2.028631e-03

Joint ci ratio: 5.589756e-02	ci left: 1.971400e-03	ci right 2.085169e-03	k: 4907	n:2420000
Cons ci ratio: 4.222067e-03	ci left: 2.620964e-01	ci right 2.632058e-01	k: 635615	n:2420000
KS ci ratio: 1.069767e-01	ci left: 5.248748e-04	ci right 5.845954e-04	k: 1341	n:2420000
TOP2A   2420000 perm   3099 sec   (781 perm/sec)   p_kst 5.541322e-04   p_cons 2.626508e-01   p_joint 2.027686e-03

Joint ci ratio: 5.573870e-02	ci left: 1.974649e-03	ci right 2.088271e-03	k: 4935	n:2430000
Cons ci ratio: 4.213386e-03	ci left: 2.620961e-01	ci right 2.632032e-01	k: 638238	n:2430000
KS ci ratio: 1.066197e-01	ci left: 5.263196e-04	ci right 5.859922e-04	k: 1350	n:2430000
TOP2A   2430000 perm   3122 sec   (778 perm/sec)   p_kst 5.555556e-04   p_cons 2.626494e-01   p_joint 2.030864e-03

Joint ci ratio: 5.564300e-02	ci left: 1.973426e-03	ci right 2.086777e-03	k: 4952	n:2440000
Cons ci ratio: 4.204790e-03	ci left: 2.620930e-01	ci right 2.631977e-01	k: 640854	n:2440000
KS ci ratio: 1.063054e-01	ci left: 5.273539e-04	ci right 5.869566e-04	k: 1358	n:2440000
TOP2A   2440000 perm   3145 sec   (776 perm/sec)   p_kst 5.565574e-04   p_cons 2.626451e-01   p_joint 2.029508e-03

Joint ci ratio: 5.551982e-02	ci left: 1.974226e-03	ci right 2.087364e-03	k: 4974	n:2450000
Cons ci ratio: 4.196083e-03	ci left: 2.621049e-01	ci right 2.632075e-01	k: 643507	n:2450000
KS ci ratio: 1.061883e-01	ci left: 5.263934e-04	ci right 5.858178e-04	k: 1361	n:2450000
TOP2A   2450000 perm   3168 sec   (773 perm/sec)   p_kst 5.555102e-04   p_cons 2.626559e-01   p_joint 2.030204e-03

Joint ci ratio: 5.546422e-02	ci left: 1.970210e-03	ci right 2.083000e-03	k: 4984	n:2460000
Cons ci ratio: 4.187662e-03	ci left: 2.620953e-01	ci right 2.631955e-01	k: 646107	n:2460000
KS ci ratio: 1.060327e-01	ci left: 5.258364e-04	ci right 5.851056e-04	k: 1365	n:2460000
TOP2A   2460000 perm   3191 sec   (771 perm/sec)   p_kst 5.548780e-04   p_cons 2.626451e-01   p_joint 2.026016e-03

Joint ci ratio: 5.532561e-02	ci left: 1.972214e-03	ci right 2.084829e-03	k: 5009	n:2470000
Cons ci ratio: 4.179231e-03	ci left: 2.620913e-01	ci right 2.631894e-01	k: 648721	n:2470000
KS ci ratio: 1.056467e-01	ci left: 5.276490e-04	ci right 5.868925e-04	k: 1375	n:2470000
TOP2A   2470000 perm   3214 sec   (768 perm/sec)   p_kst 5.566802e-04   p_cons 2.626401e-01   p_joint 2.027935e-03

Joint ci ratio: 5.523753e-02	ci left: 1.970624e-03	ci right 2.082963e-03	k: 5025	n:2480000
Cons ci ratio: 4.170607e-03	ci left: 2.621100e-01	ci right 2.632059e-01	k: 651391	n:2480000
KS ci ratio: 1.054552e-01	ci left: 5.274843e-04	ci right 5.865953e-04	k: 1380	n:2480000
TOP2A   2480000 perm   3238 sec   (766 perm/sec)   p_kst 5.564516e-04   p_cons 2.626577e-01   p_joint 2.026210e-03

Joint ci ratio: 5.514438e-02	ci left: 1.969443e-03	ci right 2.081519e-03	k: 5042	n:2490000
Cons ci ratio: 4.162244e-03	ci left: 2.621093e-01	ci right 2.632029e-01	k: 654013	n:2490000
KS ci ratio: 1.053029e-01	ci left: 5.269299e-04	ci right 5.858883e-04	k: 1384	n:2490000
TOP2A   2490000 perm   3261 sec   (763 perm/sec)   p_kst 5.558233e-04   p_cons 2.626558e-01   p_joint 2.024900e-03

Joint ci ratio: 5.502447e-02	ci left: 1.970244e-03	ci right 2.082114e-03	k: 5064	n:2500000
Cons ci ratio: 4.153841e-03	ci left: 2.621170e-01	ci right 2.632084e-01	k: 656656	n:2500000
KS ci ratio: 1.052650e-01	ci left: 5.252117e-04	ci right 5.839553e-04	k: 1385	n:2500000
TOP2A   2500000 perm   3285 sec   (761 perm/sec)   p_kst 5.540000e-04   p_cons 2.626624e-01   p_joint 2.025600e-03

Joint ci ratio: 5.489453e-02	ci left: 1.971825e-03	ci right 2.083512e-03	k: 5088	n:2510000
Cons ci ratio: 4.145705e-03	ci left: 2.621043e-01	ci right 2.631935e-01	k: 659248	n:2510000
KS ci ratio: 1.049625e-01	ci left: 5.262227e-04	ci right 5.848997e-04	k: 1393	n:2510000
TOP2A   2510000 perm   3310 sec   (758 perm/sec)   p_kst 5.549801e-04   p_cons 2.626486e-01   p_joint 2.027092e-03

Joint ci ratio: 5.477087e-02	ci left: 1.973002e-03	ci right 2.084496e-03	k: 5111	n:2520000
Cons ci ratio: 4.137766e-03	ci left: 2.620778e-01	ci right 2.631648e-01	k: 661805	n:2520000
KS ci ratio: 1.046252e-01	ci left: 5.276123e-04	ci right 5.862437e-04	k: 1402	n:2520000
TOP2A   2520000 perm   3334 sec   (756 perm/sec)   p_kst 5.563492e-04   p_cons 2.626210e-01   p_joint 2.028175e-03

Joint ci ratio: 5.465871e-02	ci left: 1.973391e-03	ci right 2.084671e-03	k: 5132	n:2530000
Cons ci ratio: 4.129653e-03	ci left: 2.620721e-01	ci right 2.631569e-01	k: 664414	n:2530000
KS ci ratio: 1.043651e-01	ci left: 5.282214e-04	ci right 5.867656e-04	k: 1409	n:2530000
TOP2A   2530000 perm   3359 sec   (753 perm/sec)   p_kst 5.569170e-04   p_cons 2.626142e-01   p_joint 2.028458e-03

Joint ci ratio: 5.448371e-02	ci left: 1.978436e-03	ci right 2.089633e-03	k: 5165	n:2540000
Cons ci ratio: 4.121445e-03	ci left: 2.620798e-01	ci right 2.631625e-01	k: 667057	n:2540000
KS ci ratio: 1.039969e-01	ci left: 5.299762e-04	ci right 5.884950e-04	k: 1419	n:2540000
TOP2A   2540000 perm   3384 sec   (751 perm/sec)   p_kst 5.586614e-04   p_cons 2.626209e-01   p_joint 2.033465e-03

Joint ci ratio: 5.431562e-02	ci left: 1.983056e-03	ci right 2.094158e-03	k: 5197	n:2550000
Cons ci ratio: 4.113261e-03	ci left: 2.620898e-01	ci right 2.631704e-01	k: 669706	n:2550000
KS ci ratio: 1.038508e-01	ci left: 5.294257e-04	ci right 5.877966e-04	k: 1423	n:2550000
TOP2A   2550000 perm   3407 sec   (748 perm/sec)   p_kst 5.580392e-04   p_cons 2.626298e-01   p_joint 2.038039e-03

Joint ci ratio: 5.427400e-02	ci left: 1.978392e-03	ci right 2.089145e-03	k: 5205	n:2560000
Cons ci ratio: 4.105167e-03	ci left: 2.620958e-01	ci right 2.631743e-01	k: 672345	n:2560000
KS ci ratio: 1.037780e-01	ci left: 5.281186e-04	ci right 5.863021e-04	k: 1425	n:2560000
TOP2A   2560000 perm   3433 sec   (746 perm/sec)   p_kst 5.566406e-04   p_cons 2.626348e-01   p_joint 2.033203e-03

Joint ci ratio: 5.418564e-02	ci left: 1.977219e-03	ci right 2.087721e-03	k: 5222	n:2570000
Cons ci ratio: 4.097454e-03	ci left: 2.620702e-01	ci right 2.631466e-01	k: 674903	n:2570000
KS ci ratio: 1.037054e-01	ci left: 5.268217e-04	ci right 5.848191e-04	k: 1427	n:2570000
TOP2A   2570000 perm   3458 sec   (743 perm/sec)   p_kst 5.552529e-04   p_cons 2.626082e-01   p_joint 2.031907e-03

Joint ci ratio: 5.405122e-02	ci left: 1.979497e-03	ci right 2.089842e-03	k: 5248	n:2580000
Cons ci ratio: 4.089551e-03	ci left: 2.620670e-01	ci right 2.631413e-01	k: 677518	n:2580000
KS ci ratio: 1.035966e-01	ci left: 5.259124e-04	ci right 5.837453e-04	k: 1430	n:2580000
TOP2A   2580000 perm   3482 sec   (741 perm/sec)   p_kst 5.542636e-04   p_cons 2.626039e-01   p_joint 2.034109e-03

Joint ci ratio: 5.394854e-02	ci left: 1.979472e-03	ci right 2.089600e-03	k: 5268	n:2590000
Cons ci ratio: 4.081705e-03	ci left: 2.620626e-01	ci right 2.631348e-01	k: 680130	n:2590000
KS ci ratio: 1.033082e-01	ci left: 5.268907e-04	ci right 5.846602e-04	k: 1438	n:2590000
TOP2A   2590000 perm   3507 sec   (739 perm/sec)   p_kst 5.552124e-04   p_cons 2.625985e-01   p_joint 2.033977e-03

Joint ci ratio: 5.389752e-02	ci left: 1.975653e-03	ci right 2.085461e-03	k: 5278	n:2600000
Cons ci ratio: 4.073703e-03	ci left: 2.620775e-01	ci right 2.631477e-01	k: 682792	n:2600000
KS ci ratio: 1.031650e-01	ci left: 5.263630e-04	ci right 5.839897e-04	k: 1442	n:2600000
TOP2A   2600000 perm   3531 sec   (736 perm/sec)   p_kst 5.546154e-04   p_cons 2.626123e-01   p_joint 2.030000e-03

Joint ci ratio: 5.380589e-02	ci left: 1.974887e-03	ci right 2.084460e-03	k: 5296	n:2610000
Cons ci ratio: 4.066004e-03	ci left: 2.620677e-01	ci right 2.631358e-01	k: 685390	n:2610000
KS ci ratio: 1.029867e-01	ci left: 5.262126e-04	ci right 5.837172e-04	k: 1447	n:2610000
TOP2A   2610000 perm   3556 sec   (734 perm/sec)   p_kst 5.544061e-04   p_cons 2.626015e-01   p_joint 2.029119e-03

Joint ci ratio: 5.369449e-02	ci left: 1.975633e-03	ci right 2.085014e-03	k: 5318	n:2620000
Cons ci ratio: 4.058178e-03	ci left: 2.620745e-01	ci right 2.631405e-01	k: 688031	n:2620000
KS ci ratio: 1.028802e-01	ci left: 5.253197e-04	ci right 5.826638e-04	k: 1450	n:2620000
TOP2A   2620000 perm   3581 sec   (732 perm/sec)   p_kst 5.534351e-04   p_cons 2.626073e-01   p_joint 2.029771e-03

Joint ci ratio: 5.357874e-02	ci left: 1.976749e-03	ci right 2.085949e-03	k: 5341	n:2630000
Cons ci ratio: 4.050698e-03	ci left: 2.620523e-01	ci right 2.631163e-01	k: 690596	n:2630000
KS ci ratio: 1.024924e-01	ci left: 5.273974e-04	ci right 5.847382e-04	k: 1461	n:2630000
TOP2A   2630000 perm   3606 sec   (729 perm/sec)   p_kst 5.555133e-04   p_cons 2.625840e-01   p_joint 2.030798e-03

Joint ci ratio: 5.347873e-02	ci left: 1.976736e-03	ci right 2.085725e-03	k: 5361	n:2640000
Cons ci ratio: 4.042927e-03	ci left: 2.620621e-01	ci right 2.631241e-01	k: 693245	n:2640000
KS ci ratio: 1.022827e-01	ci left: 5.276142e-04	ci right 5.848542e-04	k: 1467	n:2640000
TOP2A   2640000 perm   3630 sec   (727 perm/sec)   p_kst 5.556818e-04   p_cons 2.625928e-01   p_joint 2.030682e-03

Joint ci ratio: 5.336934e-02	ci left: 1.977468e-03	ci right 2.086267e-03	k: 5383	n:2650000
Cons ci ratio: 4.035429e-03	ci left: 2.620499e-01	ci right 2.631099e-01	k: 695836	n:2650000
KS ci ratio: 1.019705e-01	ci left: 5.289327e-04	ci right 5.861301e-04	k: 1476	n:2650000
TOP2A   2650000 perm   3655 sec   (725 perm/sec)   p_kst 5.569811e-04   p_cons 2.625796e-01   p_joint 2.031321e-03

Joint ci ratio: 5.327543e-02	ci left: 1.977081e-03	ci right 2.085662e-03	k: 5402	n:2660000
Cons ci ratio: 4.028043e-03	ci left: 2.620311e-01	ci right 2.630890e-01	k: 698409	n:2660000
KS ci ratio: 1.017984e-01	ci left: 5.287760e-04	ci right 5.858542e-04	k: 1481	n:2660000
TOP2A   2660000 perm   3680 sec   (723 perm/sec)   p_kst 5.567669e-04   p_cons 2.625598e-01   p_joint 2.030827e-03

Joint ci ratio: 5.317219e-02	ci left: 1.977437e-03	ci right 2.085820e-03	k: 5423	n:2670000
Cons ci ratio: 4.020729e-03	ci left: 2.620094e-01	ci right 2.630653e-01	k: 700974	n:2670000
KS ci ratio: 1.016271e-01	ci left: 5.286206e-04	ci right 5.855803e-04	k: 1486	n:2670000
TOP2A   2670000 perm   3705 sec   (721 perm/sec)   p_kst 5.565543e-04   p_cons 2.625371e-01   p_joint 2.031086e-03

Joint ci ratio: 5.310866e-02	ci left: 1.974845e-03	ci right 2.082952e-03	k: 5436	n:2680000
Cons ci ratio: 4.013284e-03	ci left: 2.620042e-01	ci right 2.630582e-01	k: 703583	n:2680000
KS ci ratio: 1.014907e-01	ci left: 5.281028e-04	ci right 5.849257e-04	k: 1490	n:2680000
TOP2A   2680000 perm   3731 sec   (718 perm/sec)   p_kst 5.559701e-04   p_cons 2.625310e-01   p_joint 2.028358e-03

Joint ci ratio: 5.303073e-02	ci left: 1.973372e-03	ci right 2.081236e-03	k: 5452	n:2690000
Cons ci ratio: 4.005761e-03	ci left: 2.620107e-01	ci right 2.630627e-01	k: 706223	n:2690000
KS ci ratio: 1.013210e-01	ci left: 5.279511e-04	ci right 5.846571e-04	k: 1495	n:2690000
TOP2A   2690000 perm   3755 sec   (716 perm/sec)   p_kst 5.557621e-04   p_cons 2.625364e-01   p_joint 2.026766e-03

Joint ci ratio: 5.295314e-02	ci left: 1.971911e-03	ci right 2.079532e-03	k: 5468	n:2700000
Cons ci ratio: 3.998306e-03	ci left: 2.620145e-01	ci right 2.630645e-01	k: 708856	n:2700000
KS ci ratio: 1.012196e-01	ci left: 5.270787e-04	ci right 5.836310e-04	k: 1498	n:2700000
TOP2A   2700000 perm   3780 sec   (714 perm/sec)   p_kst 5.548148e-04   p_cons 2.625393e-01   p_joint 2.025185e-03

Joint ci ratio: 5.285659e-02	ci left: 1.971917e-03	ci right 2.079336e-03	k: 5488	n:2710000
Cons ci ratio: 3.990859e-03	ci left: 2.620216e-01	ci right 2.630697e-01	k: 711498	n:2710000
KS ci ratio: 1.010512e-01	ci left: 5.269321e-04	ci right 5.833691e-04	k: 1503	n:2710000
TOP2A   2710000 perm   3806 sec   (712 perm/sec)   p_kst 5.546125e-04   p_cons 2.625454e-01   p_joint 2.025092e-03

Joint ci ratio: 5.270785e-02	ci left: 1.975914e-03	ci right 2.083239e-03	k: 5519	n:2720000
Cons ci ratio: 3.983424e-03	ci left: 2.620316e-01	ci right 2.630778e-01	k: 714148	n:2720000
KS ci ratio: 1.007502e-01	ci left: 5.282202e-04	ci right 5.846166e-04	k: 1512	n:2720000
TOP2A   2720000 perm   3831 sec   (710 perm/sec)   p_kst 5.558824e-04   p_cons 2.625544e-01   p_joint 2.029044e-03

Joint ci ratio: 5.257461e-02	ci left: 1.978798e-03	ci right 2.085999e-03	k: 5547	n:2730000
Cons ci ratio: 3.976120e-03	ci left: 2.620327e-01	ci right 2.630770e-01	k: 716774	n:2730000
KS ci ratio: 1.003858e-01	ci left: 5.302133e-04	ci right 5.866057e-04	k: 1523	n:2730000
TOP2A   2730000 perm   3857 sec   (708 perm/sec)   p_kst 5.578755e-04   p_cons 2.625546e-01   p_joint 2.031868e-03

Joint ci ratio: 5.249900e-02	ci left: 1.977338e-03	ci right 2.084302e-03	k: 5563	n:2740000
Cons ci ratio: 3.968553e-03	ci left: 2.620633e-01	ci right 2.631058e-01	k: 719481	n:2740000
KS ci ratio: 1.002543e-01	ci left: 5.297015e-04	ci right 5.859613e-04	k: 1527	n:2740000
TOP2A   2740000 perm   3882 sec   (706 perm/sec)   p_kst 5.572993e-04   p_cons 2.625843e-01   p_joint 2.030292e-03

Joint ci ratio: 5.240960e-02	ci left: 1.976967e-03	ci right 2.083723e-03	k: 5582	n:2750000
Cons ci ratio: 3.961293e-03	ci left: 2.620680e-01	ci right 2.631085e-01	k: 722117	n:2750000
KS ci ratio: 1.001234e-01	ci left: 5.291934e-04	ci right 5.853215e-04	k: 1531	n:2750000
TOP2A   2750000 perm   3908 sec   (704 perm/sec)   p_kst 5.567273e-04   p_cons 2.625880e-01   p_joint 2.029818e-03

Joint ci ratio: 5.230196e-02	ci left: 1.978028e-03	ci right 2.084615e-03	k: 5605	n:2760000
Cons ci ratio: 3.954132e-03	ci left: 2.620668e-01	ci right 2.631054e-01	k: 724737	n:2760000
KS ci ratio: 1.000256e-01	ci left: 5.283358e-04	ci right 5.843150e-04	k: 1534	n:2760000
TOP2A   2760000 perm   3934 sec   (702 perm/sec)   p_kst 5.557971e-04   p_cons 2.625859e-01   p_joint 2.030797e-03

Joint ci ratio: 5.221821e-02	ci left: 1.977300e-03	ci right 2.083673e-03	k: 5623	n:2770000
Cons ci ratio: 3.947153e-03	ci left: 2.620516e-01	ci right 2.630883e-01	k: 727318	n:2770000
KS ci ratio: 9.986306e-02	ci left: 5.281883e-04	ci right 5.840557e-04	k: 1539	n:2770000
TOP2A   2770000 perm   3960 sec   (699 perm/sec)   p_kst 5.555957e-04   p_cons 2.625697e-01   p_joint 2.029964e-03

Outputting figure to mutsig2_images.part000000000180/TOP2A.2_4736_2770000_0.0005556_0.26257_0.00203.png
                gene_name: TOP2A
               theta_stop: 0.100 
                    nperm: 2770000 
                     p_ks: 0.00056 
        ci_ks_bounds_left: 0.00053 
       ci_ks_bounds_right: 0.00058 
                   p_cons: 0.26 
      ci_cons_bounds_left: 0.26 
     ci_cons_bounds_right: 0.26 
                  p_joint: 0.0020 
     ci_joint_bounds_left: 0.0020 
    ci_joint_bounds_right: 0.0021 

Current progress: 60 percent done.
TOPBP1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.498200e-01	ci left: 1.023265e-02	ci right 1.465817e-02	k: 123	n:10000
Cons ci ratio: 3.960612e-01	ci left: 7.782754e-03	ci right 1.171078e-02	k: 96	n:10000
KS ci ratio: 2.667321e-02	ci left: 6.742815e-01	ci right 6.926115e-01	k: 6835	n:10000
TOPBP1   10000 perm   2 sec   (4826 perm/sec)   p_kst 6.835000e-01   p_cons 9.600000e-03   p_joint 1.230000e-02

Joint ci ratio: 2.330359e-01	ci left: 1.232340e-02	ci right 1.562013e-02	k: 278	n:20000
Cons ci ratio: 2.665217e-01	ci left: 9.273887e-03	ci right 1.217100e-02	k: 213	n:20000
KS ci ratio: 1.903163e-02	ci left: 6.730822e-01	ci right 6.860656e-01	k: 13592	n:20000
TOPBP1   20000 perm   5 sec   (4355 perm/sec)   p_kst 6.796000e-01   p_cons 1.065000e-02   p_joint 1.390000e-02

Joint ci ratio: 1.883442e-01	ci left: 1.289170e-02	ci right 1.560357e-02	k: 426	n:30000
Cons ci ratio: 2.152558e-01	ci left: 9.755930e-03	ci right 1.214020e-02	k: 327	n:30000
KS ci ratio: 1.548713e-02	ci left: 6.757588e-01	ci right 6.863395e-01	k: 20432	n:30000
TOPBP1   30000 perm   7 sec   (4120 perm/sec)   p_kst 6.810667e-01   p_cons 1.090000e-02   p_joint 1.420000e-02

Joint ci ratio: 1.858457e-01	ci left: 9.977125e-03	ci right 1.204478e-02	k: 439	n:40000
Cons ci ratio: 2.086115e-01	ci left: 7.836928e-03	ci right 9.685449e-03	k: 349	n:40000
KS ci ratio: 1.344063e-02	ci left: 6.755537e-01	ci right 6.847201e-01	k: 27206	n:40000
TOPBP1   40000 perm   10 sec   (4000 perm/sec)   p_kst 6.801500e-01   p_cons 8.725000e-03   p_joint 1.097500e-02

Joint ci ratio: 1.642739e-01	ci left: 1.033442e-02	ci right 1.220297e-02	k: 562	n:50000
Cons ci ratio: 1.841619e-01	ci left: 8.152640e-03	ci right 9.825115e-03	k: 448	n:50000
KS ci ratio: 1.202088e-02	ci left: 6.760715e-01	ci right 6.842676e-01	k: 34009	n:50000
TOPBP1   50000 perm   13 sec   (3923 perm/sec)   p_kst 6.801800e-01   p_cons 8.960000e-03   p_joint 1.124000e-02

Joint ci ratio: 1.503669e-01	ci left: 1.035728e-02	ci right 1.205716e-02	k: 671	n:60000
Cons ci ratio: 1.691970e-01	ci left: 8.116098e-03	ci right 9.631980e-03	k: 531	n:60000
KS ci ratio: 1.098900e-02	ci left: 6.758159e-01	ci right 6.833001e-01	k: 40774	n:60000
TOPBP1   60000 perm   16 sec   (3837 perm/sec)   p_kst 6.795667e-01   p_cons 8.850000e-03   p_joint 1.118333e-02

Joint ci ratio: 1.403028e-01	ci left: 1.025430e-02	ci right 1.181520e-02	k: 771	n:70000
Cons ci ratio: 1.584154e-01	ci left: 7.984152e-03	ci right 9.371322e-03	k: 606	n:70000
KS ci ratio: 1.016974e-02	ci left: 6.762719e-01	ci right 6.831989e-01	k: 47582	n:70000
TOPBP1   70000 perm   19 sec   (3767 perm/sec)   p_kst 6.797429e-01   p_cons 8.657143e-03   p_joint 1.101429e-02

Joint ci ratio: 1.297830e-01	ci left: 1.054277e-02	ci right 1.201799e-02	k: 901	n:80000
Cons ci ratio: 1.464598e-01	ci left: 8.224656e-03	ci right 9.536332e-03	k: 709	n:80000
KS ci ratio: 9.510593e-03	ci left: 6.766044e-01	ci right 6.830825e-01	k: 54388	n:80000
TOPBP1   80000 perm   22 sec   (3698 perm/sec)   p_kst 6.798500e-01   p_cons 8.862500e-03   p_joint 1.126250e-02

Joint ci ratio: 1.226514e-01	ci left: 1.053348e-02	ci right 1.192052e-02	k: 1009	n:90000
Cons ci ratio: 1.388531e-01	ci left: 8.167964e-03	ci right 9.397344e-03	k: 789	n:90000
KS ci ratio: 8.979844e-03	ci left: 6.761502e-01	ci right 6.822604e-01	k: 61129	n:90000
TOPBP1   90000 perm   25 sec   (3636 perm/sec)   p_kst 6.792111e-01   p_cons 8.766667e-03   p_joint 1.121111e-02

Joint ci ratio: 1.161598e-01	ci left: 1.060552e-02	ci right 1.192306e-02	k: 1125	n:100000
Cons ci ratio: 1.314092e-01	ci left: 8.240100e-03	ci right 9.408656e-03	k: 881	n:100000
KS ci ratio: 8.523358e-03	ci left: 6.760862e-01	ci right 6.818834e-01	k: 67899	n:100000
TOPBP1   100000 perm   28 sec   (3580 perm/sec)   p_kst 6.789900e-01   p_cons 8.810000e-03   p_joint 1.125000e-02

Joint ci ratio: 1.102867e-01	ci left: 1.072795e-02	ci right 1.198892e-02	k: 1248	n:110000
Cons ci ratio: 1.246602e-01	ci left: 8.353417e-03	ci right 9.472706e-03	k: 979	n:110000
KS ci ratio: 8.122793e-03	ci left: 6.764323e-01	ci right 6.819583e-01	k: 74712	n:110000
TOPBP1   110000 perm   31 sec   (3529 perm/sec)   p_kst 6.792000e-01   p_cons 8.900000e-03   p_joint 1.134545e-02

Joint ci ratio: 1.054564e-01	ci left: 1.078267e-02	ci right 1.199112e-02	k: 1365	n:120000
Cons ci ratio: 1.194146e-01	ci left: 8.368254e-03	ci right 9.439015e-03	k: 1067	n:120000
KS ci ratio: 7.786357e-03	ci left: 6.760244e-01	ci right 6.813170e-01	k: 81441	n:120000
TOPBP1   120000 perm   35 sec   (3476 perm/sec)   p_kst 6.786750e-01   p_cons 8.891667e-03   p_joint 1.137500e-02

Joint ci ratio: 1.014175e-01	ci left: 1.078499e-02	ci right 1.194465e-02	k: 1476	n:130000
Cons ci ratio: 1.146799e-01	ci left: 8.396591e-03	ci right 9.425494e-03	k: 1157	n:130000
KS ci ratio: 7.479541e-03	ci left: 6.762077e-01	ci right 6.812920e-01	k: 88238	n:130000
TOPBP1   130000 perm   38 sec   (3425 perm/sec)   p_kst 6.787538e-01   p_cons 8.900000e-03   p_joint 1.135385e-02

Joint ci ratio: 9.737651e-02	ci left: 1.088533e-02	ci right 1.200647e-02	k: 1601	n:140000
Cons ci ratio: 1.098471e-01	ci left: 8.518866e-03	ci right 9.515914e-03	k: 1261	n:140000
KS ci ratio: 7.215443e-03	ci left: 6.758172e-01	ci right 6.807183e-01	k: 94958	n:140000
TOPBP1   140000 perm   41 sec   (3374 perm/sec)   p_kst 6.782714e-01   p_cons 9.007143e-03   p_joint 1.143571e-02

Joint ci ratio: 9.456150e-02	ci left: 1.079076e-02	ci right 1.186825e-02	k: 1698	n:150000
Cons ci ratio: 1.066065e-01	ci left: 8.456852e-03	ci right 9.415608e-03	k: 1339	n:150000
KS ci ratio: 6.975437e-03	ci left: 6.756087e-01	ci right 6.803444e-01	k: 101697	n:150000
TOPBP1   150000 perm   45 sec   (3326 perm/sec)   p_kst 6.779800e-01   p_cons 8.926667e-03   p_joint 1.132000e-02

Joint ci ratio: 9.128577e-02	ci left: 1.087335e-02	ci right 1.191947e-02	k: 1822	n:160000
Cons ci ratio: 1.028709e-01	ci left: 8.530858e-03	ci right 9.462065e-03	k: 1438	n:160000
KS ci ratio: 6.758271e-03	ci left: 6.754037e-01	ci right 6.799899e-01	k: 108432	n:160000
TOPBP1   160000 perm   49 sec   (3280 perm/sec)   p_kst 6.777000e-01   p_cons 8.987500e-03   p_joint 1.138750e-02

Joint ci ratio: 8.844338e-02	ci left: 1.091802e-02	ci right 1.193404e-02	k: 1941	n:170000
Cons ci ratio: 9.979739e-02	ci left: 8.545041e-03	ci right 9.448294e-03	k: 1528	n:170000
KS ci ratio: 6.554546e-03	ci left: 6.756021e-01	ci right 6.800507e-01	k: 115231	n:170000
TOPBP1   170000 perm   53 sec   (3233 perm/sec)   p_kst 6.778294e-01   p_cons 8.988235e-03   p_joint 1.141765e-02

Outputting figure to mutsig2_images.part000000000180/TOPBP1.2_4677_170000_0.67783_0.0089882_0.011418.png
                gene_name: TOPBP1
               theta_stop: 0.100 
                    nperm: 170000 
                     p_ks: 0.68 
        ci_ks_bounds_left: 0.68 
       ci_ks_bounds_right: 0.68 
                   p_cons: 0.0090 
      ci_cons_bounds_left: 0.0085 
     ci_cons_bounds_right: 0.0094 
                  p_joint: 0.011 
     ci_joint_bounds_left: 0.011 
    ci_joint_bounds_right: 0.012 

Current progress: 80 percent done.
TPTE2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.823649e-01	ci left: 8.414755e-03	ci right 1.247803e-02	k: 103	n:10000
Cons ci ratio: 1.209756e-02	ci left: 9.074079e-01	ci right 9.185501e-01	k: 9131	n:10000
KS ci ratio: 1.238931e+00	ci left: 4.116173e-04	ci right 1.707790e-03	k: 9	n:10000
TPTE2   10000 perm   2 sec   (6562 perm/sec)   p_kst 9.000000e-04   p_cons 9.131000e-01   p_joint 1.030000e-02

Joint ci ratio: 6.527288e-01	ci left: 1.219232e-03	ci right 2.432994e-03	k: 35	n:20000
Cons ci ratio: 8.603752e-03	ci left: 9.081417e-01	ci right 9.160381e-01	k: 18243	n:20000
KS ci ratio: 9.503118e-01	ci left: 4.573361e-04	ci right 1.298826e-03	k: 16	n:20000
TPTE2   20000 perm   3 sec   (5792 perm/sec)   p_kst 8.000000e-04   p_cons 9.121500e-01   p_joint 1.750000e-03

Joint ci ratio: 5.539003e-01	ci left: 1.208586e-03	ci right 2.158785e-03	k: 49	n:30000
Cons ci ratio: 7.568506e-03	ci left: 8.959746e-01	ci right 9.028145e-01	k: 26983	n:30000
KS ci ratio: 7.684293e-01	ci left: 5.393597e-04	ci right 1.229920e-03	k: 25	n:30000
TPTE2   30000 perm   6 sec   (5438 perm/sec)   p_kst 8.333333e-04   p_cons 8.994333e-01   p_joint 1.633333e-03

Joint ci ratio: 4.784970e-01	ci left: 1.276333e-03	ci right 2.098733e-03	k: 66	n:40000
Cons ci ratio: 6.521105e-03	ci left: 8.973730e-01	ci right 9.032687e-01	k: 36014	n:40000
KS ci ratio: 6.926788e-01	ci left: 5.266337e-04	ci right 1.099872e-03	k: 31	n:40000
TPTE2   40000 perm   8 sec   (5235 perm/sec)   p_kst 7.750000e-04   p_cons 9.003500e-01   p_joint 1.650000e-03

Joint ci ratio: 4.975268e-01	ci left: 9.333279e-04	ci right 1.566869e-03	k: 61	n:50000
Cons ci ratio: 5.830292e-03	ci left: 8.977621e-01	ci right 9.030314e-01	k: 45021	n:50000
KS ci ratio: 6.195523e-01	ci left: 5.547132e-04	ci right 1.066133e-03	k: 39	n:50000
TPTE2   50000 perm   10 sec   (5081 perm/sec)   p_kst 7.800000e-04   p_cons 9.004200e-01   p_joint 1.220000e-03

Joint ci ratio: 4.523559e-01	ci left: 9.685522e-04	ci right 1.548093e-03	k: 74	n:60000
Cons ci ratio: 5.324329e-03	ci left: 8.979256e-01	ci right 9.027356e-01	k: 54021	n:60000
KS ci ratio: 5.715620e-01	ci left: 5.613493e-04	ci right 1.022495e-03	k: 46	n:60000
TPTE2   60000 perm   12 sec   (4951 perm/sec)   p_kst 7.666667e-04   p_cons 9.003500e-01   p_joint 1.233333e-03

Joint ci ratio: 4.585587e-01	ci left: 8.048781e-04	ci right 1.295143e-03	k: 72	n:70000
Cons ci ratio: 4.929924e-03	ci left: 8.980857e-01	ci right 9.025382e-01	k: 63023	n:70000
KS ci ratio: 5.434004e-01	ci left: 5.425159e-04	ci right 9.578270e-04	k: 51	n:70000
TPTE2   70000 perm   14 sec   (4836 perm/sec)   p_kst 7.285714e-04   p_cons 9.003286e-01   p_joint 1.028571e-03

Joint ci ratio: 4.224746e-01	ci left: 8.487727e-04	ci right 1.313633e-03	k: 85	n:80000
Cons ci ratio: 4.605806e-03	ci left: 8.984554e-01	ci right 9.026155e-01	k: 72044	n:80000
KS ci ratio: 4.976444e-01	ci left: 5.833007e-04	ci right 9.793569e-04	k: 61	n:80000
TPTE2   80000 perm   17 sec   (4732 perm/sec)   p_kst 7.625000e-04   p_cons 9.005500e-01   p_joint 1.062500e-03

Joint ci ratio: 3.937559e-01	ci left: 8.840983e-04	ci right 1.326849e-03	k: 98	n:90000
Cons ci ratio: 4.331462e-03	ci left: 8.990303e-01	ci right 9.029438e-01	k: 81090	n:90000
KS ci ratio: 4.787233e-01	ci left: 5.672039e-04	ci right 9.328867e-04	k: 66	n:90000
TPTE2   90000 perm   19 sec   (4629 perm/sec)   p_kst 7.333333e-04   p_cons 9.010000e-01   p_joint 1.088889e-03

Joint ci ratio: 2.125429e-01	ci left: 3.029745e-03	ci right 3.759528e-03	k: 338	n:100000
Cons ci ratio: 4.102028e-03	ci left: 8.994448e-01	ci right 9.031519e-01	k: 90131	n:100000
KS ci ratio: 4.436772e-01	ci left: 6.077183e-04	ci right 9.622753e-04	k: 77	n:100000
TPTE2   100000 perm   22 sec   (4540 perm/sec)   p_kst 7.700000e-04   p_cons 9.013100e-01   p_joint 3.380000e-03

Joint ci ratio: 2.059760e-01	ci left: 2.943820e-03	ci right 3.628237e-03	k: 360	n:110000
Cons ci ratio: 3.908941e-03	ci left: 8.996323e-01	ci right 9.031647e-01	k: 99155	n:110000
KS ci ratio: 4.177043e-01	ci left: 6.335328e-04	ci right 9.754933e-04	k: 87	n:110000
TPTE2   110000 perm   25 sec   (4450 perm/sec)   p_kst 7.909091e-04   p_cons 9.014091e-01   p_joint 3.272727e-03

Joint ci ratio: 1.966613e-01	ci left: 2.975477e-03	ci right 3.632223e-03	k: 395	n:120000
Cons ci ratio: 3.744288e-03	ci left: 8.996238e-01	ci right 9.030068e-01	k: 108159	n:120000
KS ci ratio: 3.978531e-01	ci left: 6.480491e-04	ci right 9.768505e-04	k: 96	n:120000
TPTE2   120000 perm   28 sec   (4360 perm/sec)   p_kst 8.000000e-04   p_cons 9.013250e-01   p_joint 3.291667e-03

Joint ci ratio: 1.942416e-01	ci left: 2.819730e-03	ci right 3.433534e-03	k: 405	n:130000
Cons ci ratio: 3.594938e-03	ci left: 8.998131e-01	ci right 9.030613e-01	k: 117188	n:130000
KS ci ratio: 3.823968e-01	ci left: 6.537033e-04	ci right 9.692518e-04	k: 104	n:130000
TPTE2   130000 perm   30 sec   (4278 perm/sec)   p_kst 8.000000e-04   p_cons 9.014462e-01   p_joint 3.115385e-03

Joint ci ratio: 1.846987e-01	ci left: 2.910915e-03	ci right 3.509953e-03	k: 448	n:140000
Cons ci ratio: 3.456842e-03	ci left: 9.002509e-01	ci right 9.033753e-01	k: 126255	n:140000
KS ci ratio: 3.686124e-01	ci left: 6.587617e-04	ci right 9.625296e-04	k: 112	n:140000
TPTE2   140000 perm   33 sec   (4203 perm/sec)   p_kst 8.000000e-04   p_cons 9.018214e-01   p_joint 3.200000e-03

Joint ci ratio: 1.767975e-01	ci left: 2.977834e-03	ci right 3.561627e-03	k: 489	n:150000
Cons ci ratio: 3.341534e-03	ci left: 9.002024e-01	ci right 9.032221e-01	k: 135258	n:150000
KS ci ratio: 3.638209e-01	ci left: 6.330022e-04	ci right 9.201965e-04	k: 115	n:150000
TPTE2   150000 perm   36 sec   (4126 perm/sec)   p_kst 7.666667e-04   p_cons 9.017200e-01   p_joint 3.260000e-03

Joint ci ratio: 1.714579e-01	ci left: 2.977026e-03	ci right 3.541211e-03	k: 520	n:160000
Cons ci ratio: 3.228482e-03	ci left: 9.006334e-01	ci right 9.035520e-01	k: 144336	n:160000
KS ci ratio: 3.533175e-01	ci left: 6.332491e-04	ci right 9.103587e-04	k: 122	n:160000
TPTE2   160000 perm   39 sec   (4053 perm/sec)   p_kst 7.625000e-04   p_cons 9.021000e-01   p_joint 3.250000e-03

Joint ci ratio: 1.761122e-01	ci left: 2.649951e-03	ci right 3.167233e-03	k: 493	n:170000
Cons ci ratio: 3.131041e-03	ci left: 9.007367e-01	ci right 9.035672e-01	k: 153367	n:170000
KS ci ratio: 3.360018e-01	ci left: 6.658567e-04	ci right 9.398658e-04	k: 135	n:170000
TPTE2   170000 perm   43 sec   (3985 perm/sec)   p_kst 7.941176e-04   p_cons 9.021588e-01   p_joint 2.900000e-03

Joint ci ratio: 2.742986e-01	ci left: 9.780355e-04	ci right 1.293941e-03	k: 203	n:180000
Cons ci ratio: 3.040771e-03	ci left: 9.008968e-01	ci right 9.036458e-01	k: 162410	n:180000
KS ci ratio: 3.254062e-01	ci left: 6.747150e-04	ci right 9.417860e-04	k: 144	n:180000
TPTE2   180000 perm   46 sec   (3919 perm/sec)   p_kst 8.000000e-04   p_cons 9.022778e-01   p_joint 1.127778e-03

Joint ci ratio: 2.492608e-01	ci left: 1.138070e-03	ci right 1.466922e-03	k: 246	n:190000
Cons ci ratio: 2.957527e-03	ci left: 9.010621e-01	ci right 9.037361e-01	k: 171457	n:190000
KS ci ratio: 3.147327e-01	ci left: 6.876091e-04	ci right 9.490620e-04	k: 154	n:190000
TPTE2   190000 perm   49 sec   (3852 perm/sec)   p_kst 8.105263e-04   p_cons 9.024053e-01   p_joint 1.294737e-03

Joint ci ratio: 2.820309e-01	ci left: 8.290579e-04	ci right 1.105735e-03	k: 192	n:200000
Cons ci ratio: 2.881169e-03	ci left: 9.011866e-01	ci right 9.037917e-01	k: 180499	n:200000
KS ci ratio: 3.107518e-01	ci left: 6.716582e-04	ci right 9.231750e-04	k: 158	n:200000
TPTE2   200000 perm   53 sec   (3787 perm/sec)   p_kst 7.900000e-04   p_cons 9.024950e-01   p_joint 9.600000e-04

Joint ci ratio: 2.756769e-01	ci left: 8.294398e-04	ci right 1.098927e-03	k: 201	n:210000
Cons ci ratio: 2.814009e-03	ci left: 9.010749e-01	ci right 9.036188e-01	k: 189494	n:210000
KS ci ratio: 3.069182e-01	ci left: 6.572453e-04	ci right 8.997347e-04	k: 162	n:210000
TPTE2   210000 perm   56 sec   (3724 perm/sec)   p_kst 7.714286e-04   p_cons 9.023524e-01   p_joint 9.571429e-04

Joint ci ratio: 2.518479e-01	ci left: 9.615673e-04	ci right 1.242753e-03	k: 241	n:220000
Cons ci ratio: 2.746225e-03	ci left: 9.013032e-01	ci right 9.037862e-01	k: 198561	n:220000
KS ci ratio: 3.023184e-01	ci left: 6.483604e-04	ci right 8.832975e-04	k: 167	n:220000
TPTE2   220000 perm   60 sec   (3666 perm/sec)   p_kst 7.590909e-04   p_cons 9.025500e-01   p_joint 1.095455e-03

Joint ci ratio: 2.665964e-01	ci left: 8.140467e-04	ci right 1.068366e-03	k: 215	n:230000
Cons ci ratio: 2.683834e-03	ci left: 9.014641e-01	ci right 9.038910e-01	k: 207617	n:230000
KS ci ratio: 2.962108e-01	ci left: 6.483210e-04	ci right 8.776062e-04	k: 174	n:230000
TPTE2   230000 perm   64 sec   (3608 perm/sec)   p_kst 7.565217e-04   p_cons 9.026826e-01   p_joint 9.347826e-04

Joint ci ratio: 2.600559e-01	ci left: 8.229370e-04	ci right 1.072702e-03	k: 226	n:240000
Cons ci ratio: 2.627064e-03	ci left: 9.015074e-01	ci right 9.038829e-01	k: 216648	n:240000
KS ci ratio: 2.873163e-01	ci left: 6.637884e-04	ci right 8.902157e-04	k: 185	n:240000
TPTE2   240000 perm   68 sec   (3551 perm/sec)   p_kst 7.708333e-04   p_cons 9.027000e-01   p_joint 9.416667e-04

Joint ci ratio: 2.529129e-01	ci left: 8.386782e-04	ci right 1.085128e-03	k: 239	n:250000
Cons ci ratio: 2.576446e-03	ci left: 9.013627e-01	ci right 9.036920e-01	k: 225633	n:250000
KS ci ratio: 2.784714e-01	ci left: 6.818334e-04	ci right 9.060015e-04	k: 197	n:250000
TPTE2   250000 perm   71 sec   (3498 perm/sec)   p_kst 7.880000e-04   p_cons 9.025320e-01   p_joint 9.560000e-04

Joint ci ratio: 2.493046e-01	ci left: 8.316499e-04	ci right 1.072006e-03	k: 246	n:260000
Cons ci ratio: 2.525546e-03	ci left: 9.014462e-01	ci right 9.037295e-01	k: 234674	n:260000
KS ci ratio: 2.743467e-01	ci left: 6.770865e-04	ci right 8.958280e-04	k: 203	n:260000
TPTE2   260000 perm   75 sec   (3446 perm/sec)   p_kst 7.807692e-04   p_cons 9.025923e-01   p_joint 9.461538e-04

Joint ci ratio: 2.258186e-01	ci left: 9.889818e-04	ci right 1.244144e-03	k: 300	n:270000
Cons ci ratio: 2.477234e-03	ci left: 9.015462e-01	ci right 9.037859e-01	k: 243721	n:270000
KS ci ratio: 2.659995e-01	ci left: 6.968978e-04	ci right 9.140488e-04	k: 216	n:270000
TPTE2   270000 perm   80 sec   (3395 perm/sec)   p_kst 8.000000e-04   p_cons 9.026704e-01   p_joint 1.111111e-03

Joint ci ratio: 2.406893e-01	ci left: 8.325867e-04	ci right 1.063658e-03	k: 264	n:280000
Cons ci ratio: 2.433915e-03	ci left: 9.014707e-01	ci right 9.036710e-01	k: 252721	n:280000
KS ci ratio: 2.647850e-01	ci left: 6.786754e-04	ci right 8.890225e-04	k: 218	n:280000
TPTE2   280000 perm   84 sec   (3346 perm/sec)   p_kst 7.785714e-04   p_cons 9.025750e-01   p_joint 9.428571e-04

Joint ci ratio: 2.033857e-01	ci left: 1.149227e-03	ci right 1.412626e-03	k: 370	n:290000
Cons ci ratio: 2.394195e-03	ci left: 9.012968e-01	ci right 9.034607e-01	k: 261691	n:290000
KS ci ratio: 2.578139e-01	ci left: 6.939431e-04	ci right 9.024487e-04	k: 230	n:290000
TPTE2   290000 perm   88 sec   (3298 perm/sec)   p_kst 7.931034e-04   p_cons 9.023828e-01   p_joint 1.275862e-03

Joint ci ratio: 2.012293e-01	ci left: 1.136234e-03	ci right 1.393555e-03	k: 378	n:300000
Cons ci ratio: 2.354435e-03	ci left: 9.012789e-01	ci right 9.034067e-01	k: 270704	n:300000
KS ci ratio: 2.556120e-01	ci left: 6.832866e-04	ci right 8.865572e-04	k: 234	n:300000
TPTE2   300000 perm   92 sec   (3254 perm/sec)   p_kst 7.800000e-04   p_cons 9.023467e-01   p_joint 1.260000e-03

Joint ci ratio: 1.983717e-01	ci left: 1.133290e-03	ci right 1.385859e-03	k: 389	n:310000
Cons ci ratio: 2.316677e-03	ci left: 9.012559e-01	ci right 9.033494e-01	k: 279715	n:310000
KS ci ratio: 2.513691e-01	ci left: 6.854123e-04	ci right 8.854009e-04	k: 242	n:310000
TPTE2   310000 perm   97 sec   (3208 perm/sec)   p_kst 7.806452e-04   p_cons 9.023065e-01   p_joint 1.254839e-03

Joint ci ratio: 1.946628e-01	ci left: 1.142444e-03	ci right 1.391729e-03	k: 404	n:320000
Cons ci ratio: 2.282052e-03	ci left: 9.011279e-01	ci right 9.031898e-01	k: 288692	n:320000
KS ci ratio: 2.458647e-01	ci left: 6.962273e-04	ci right 8.942436e-04	k: 253	n:320000
TPTE2   320000 perm   101 sec   (3164 perm/sec)   p_kst 7.906250e-04   p_cons 9.021625e-01   p_joint 1.262500e-03

Joint ci ratio: 1.913826e-01	ci left: 1.148199e-03	ci right 1.394026e-03	k: 418	n:330000
Cons ci ratio: 2.250472e-03	ci left: 9.008862e-01	ci right 9.029189e-01	k: 297629	n:330000
KS ci ratio: 2.402534e-01	ci left: 7.092793e-04	ci right 9.057183e-04	k: 265	n:330000
TPTE2   330000 perm   106 sec   (3121 perm/sec)   p_kst 8.030303e-04   p_cons 9.019061e-01   p_joint 1.266667e-03

Joint ci ratio: 2.007148e-01	ci left: 1.008139e-03	ci right 1.235795e-03	k: 380	n:340000
Cons ci ratio: 2.217647e-03	ci left: 9.008598e-01	ci right 9.028627e-01	k: 306634	n:340000
KS ci ratio: 2.367201e-01	ci left: 7.105418e-04	ci right 9.040122e-04	k: 273	n:340000
TPTE2   340000 perm   110 sec   (3081 perm/sec)   p_kst 8.029412e-04   p_cons 9.018647e-01   p_joint 1.117647e-03

Joint ci ratio: 1.981319e-01	ci left: 1.006480e-03	ci right 1.230483e-03	k: 390	n:350000
Cons ci ratio: 2.186429e-03	ci left: 9.008180e-01	ci right 9.027925e-01	k: 315633	n:350000
KS ci ratio: 2.337534e-01	ci left: 7.090618e-04	ci right 8.993600e-04	k: 280	n:350000
TPTE2   350000 perm   115 sec   (3040 perm/sec)   p_kst 8.000000e-04   p_cons 9.018086e-01   p_joint 1.114286e-03

Joint ci ratio: 1.232952e-01	ci left: 2.627321e-03	ci right 2.975203e-03	k: 1007	n:360000
Cons ci ratio: 2.157000e-03	ci left: 9.007368e-01	ci right 9.026845e-01	k: 324617	n:360000
KS ci ratio: 2.289153e-01	ci left: 7.207680e-04	ci right 9.096387e-04	k: 292	n:360000
TPTE2   360000 perm   120 sec   (2998 perm/sec)   p_kst 8.111111e-04   p_cons 9.017139e-01   p_joint 2.797222e-03

Joint ci ratio: 1.923170e-01	ci left: 1.013771e-03	ci right 1.232001e-03	k: 414	n:370000
Cons ci ratio: 2.127559e-03	ci left: 9.007579e-01	ci right 9.026790e-01	k: 333637	n:370000
KS ci ratio: 2.269877e-01	ci left: 7.140293e-04	ci right 8.993381e-04	k: 297	n:370000
TPTE2   370000 perm   125 sec   (2957 perm/sec)   p_kst 8.027027e-04   p_cons 9.017216e-01   p_joint 1.118919e-03

Joint ci ratio: 1.907164e-01	ci left: 1.004630e-03	ci right 1.218883e-03	k: 421	n:380000
Cons ci ratio: 2.098449e-03	ci left: 9.008495e-01	ci right 9.027444e-01	k: 342684	n:380000
KS ci ratio: 2.254807e-01	ci left: 7.051685e-04	ci right 8.867937e-04	k: 301	n:380000
TPTE2   380000 perm   130 sec   (2917 perm/sec)   p_kst 7.921053e-04   p_cons 9.018000e-01   p_joint 1.107895e-03

Joint ci ratio: 1.876287e-01	ci left: 1.013068e-03	ci right 1.225225e-03	k: 435	n:390000
Cons ci ratio: 2.072060e-03	ci left: 9.008026e-01	ci right 9.026735e-01	k: 351679	n:390000
KS ci ratio: 2.218372e-01	ci left: 7.112921e-04	ci right 8.911302e-04	k: 311	n:390000
TPTE2   390000 perm   136 sec   (2877 perm/sec)   p_kst 7.974359e-04   p_cons 9.017410e-01   p_joint 1.115385e-03

Joint ci ratio: 1.857222e-01	ci left: 1.009190e-03	ci right 1.218145e-03	k: 444	n:400000
Cons ci ratio: 2.047248e-03	ci left: 9.007054e-01	ci right 9.025537e-01	k: 360653	n:400000
KS ci ratio: 2.200816e-01	ci left: 7.053178e-04	ci right 8.820430e-04	k: 316	n:400000
TPTE2   400000 perm   141 sec   (2842 perm/sec)   p_kst 7.900000e-04   p_cons 9.016325e-01   p_joint 1.110000e-03

Joint ci ratio: 1.842794e-01	ci left: 1.000858e-03	ci right 1.206298e-03	k: 451	n:410000
Cons ci ratio: 2.021496e-03	ci left: 9.007724e-01	ci right 9.025975e-01	k: 369692	n:410000
KS ci ratio: 2.187071e-01	ci left: 6.973346e-04	ci right 8.708216e-04	k: 320	n:410000
TPTE2   410000 perm   146 sec   (2808 perm/sec)   p_kst 7.804878e-04   p_cons 9.016878e-01   p_joint 1.100000e-03

Joint ci ratio: 1.816848e-01	ci left: 1.006563e-03	ci right 1.209944e-03	k: 464	n:420000
Cons ci ratio: 1.997121e-03	ci left: 9.007980e-01	ci right 9.026012e-01	k: 378715	n:420000
KS ci ratio: 2.157039e-01	ci left: 7.009945e-04	ci right 8.726800e-04	k: 329	n:420000
TPTE2   420000 perm   151 sec   (2774 perm/sec)   p_kst 7.833333e-04   p_cons 9.017024e-01   p_joint 1.104762e-03

Joint ci ratio: 1.795732e-01	ci left: 1.007579e-03	ci right 1.208543e-03	k: 475	n:430000
Cons ci ratio: 1.973348e-03	ci left: 9.008460e-01	ci right 9.026277e-01	k: 387748	n:430000
KS ci ratio: 2.131358e-01	ci left: 7.022979e-04	ci right 8.719873e-04	k: 337	n:430000
TPTE2   430000 perm   157 sec   (2741 perm/sec)   p_kst 7.837209e-04   p_cons 9.017395e-01   p_joint 1.104651e-03

Joint ci ratio: 1.782680e-01	ci left: 9.998758e-04	ci right 1.197697e-03	k: 482	n:440000
Cons ci ratio: 1.950604e-03	ci left: 9.008736e-01	ci right 9.026348e-01	k: 396773	n:440000
KS ci ratio: 2.109627e-01	ci left: 7.014008e-04	ci right 8.689222e-04	k: 344	n:440000
TPTE2   440000 perm   162 sec   (2710 perm/sec)   p_kst 7.818182e-04   p_cons 9.017568e-01   p_joint 1.095455e-03

Joint ci ratio: 1.882923e-01	ci left: 8.716335e-04	ci right 1.054890e-03	k: 432	n:450000
Cons ci ratio: 1.928750e-03	ci left: 9.008889e-01	ci right 9.026304e-01	k: 405793	n:450000
KS ci ratio: 2.094511e-01	ci left: 6.963402e-04	ci right 8.613082e-04	k: 349	n:450000
TPTE2   450000 perm   168 sec   (2680 perm/sec)   p_kst 7.755556e-04   p_cons 9.017622e-01   p_joint 9.600000e-04

Joint ci ratio: 1.750371e-01	ci left: 9.938030e-04	ci right 1.186483e-03	k: 500	n:460000
Cons ci ratio: 1.908106e-03	ci left: 9.008579e-01	ci right 9.025806e-01	k: 414792	n:460000
KS ci ratio: 2.068087e-01	ci left: 6.997480e-04	ci right 8.631675e-04	k: 358	n:460000
TPTE2   460000 perm   174 sec   (2650 perm/sec)   p_kst 7.782609e-04   p_cons 9.017217e-01   p_joint 1.086957e-03

Joint ci ratio: 1.729776e-01	ci left: 9.970784e-04	ci right 1.187881e-03	k: 512	n:470000
Cons ci ratio: 1.887000e-03	ci left: 9.009329e-01	ci right 9.026366e-01	k: 423840	n:470000
KS ci ratio: 2.037106e-01	ci left: 7.070614e-04	ci right 8.694074e-04	k: 369	n:470000
TPTE2   470000 perm   179 sec   (2619 perm/sec)   p_kst 7.851064e-04   p_cons 9.017872e-01   p_joint 1.089362e-03

Joint ci ratio: 1.714802e-01	ci left: 9.942475e-04	ci right 1.182691e-03	k: 521	n:480000
Cons ci ratio: 1.866996e-03	ci left: 9.009651e-01	ci right 9.026508e-01	k: 432869	n:480000
KS ci ratio: 2.018108e-01	ci left: 7.061739e-04	ci right 8.666175e-04	k: 376	n:480000
TPTE2   480000 perm   185 sec   (2590 perm/sec)   p_kst 7.833333e-04   p_cons 9.018104e-01   p_joint 1.085417e-03

Joint ci ratio: 1.697015e-01	ci left: 9.954473e-04	ci right 1.181961e-03	k: 532	n:490000
Cons ci ratio: 1.847678e-03	ci left: 9.009900e-01	ci right 9.026583e-01	k: 441895	n:490000
KS ci ratio: 2.002241e-01	ci left: 7.033906e-04	ci right 8.617920e-04	k: 382	n:490000
TPTE2   490000 perm   191 sec   (2561 perm/sec)   p_kst 7.795918e-04   p_cons 9.018265e-01   p_joint 1.085714e-03

Joint ci ratio: 1.693855e-01	ci left: 9.793680e-04	ci right 1.162492e-03	k: 534	n:500000
Cons ci ratio: 1.828617e-03	ci left: 9.010461e-01	ci right 9.026972e-01	k: 450937	n:500000
KS ci ratio: 1.997046e-01	ci left: 6.931222e-04	ci right 8.487567e-04	k: 384	n:500000
TPTE2   500000 perm   197 sec   (2534 perm/sec)   p_kst 7.680000e-04   p_cons 9.018740e-01   p_joint 1.068000e-03

Joint ci ratio: 1.614273e-01	ci left: 1.061670e-03	ci right 1.249953e-03	k: 588	n:510000
Cons ci ratio: 1.811458e-03	ci left: 9.009702e-01	ci right 9.026057e-01	k: 459913	n:510000
KS ci ratio: 1.974103e-01	ci left: 6.963014e-04	ci right 8.506375e-04	k: 393	n:510000
TPTE2   510000 perm   203 sec   (2507 perm/sec)   p_kst 7.705882e-04   p_cons 9.017902e-01   p_joint 1.152941e-03

Joint ci ratio: 1.594097e-01	ci left: 1.068942e-03	ci right 1.255918e-03	k: 603	n:520000
Cons ci ratio: 1.794830e-03	ci left: 9.008915e-01	ci right 9.025118e-01	k: 468886	n:520000
KS ci ratio: 1.949513e-01	ci left: 7.011974e-04	ci right 8.544530e-04	k: 403	n:520000
TPTE2   520000 perm   210 sec   (2481 perm/sec)   p_kst 7.750000e-04   p_cons 9.017038e-01   p_joint 1.159615e-03

Joint ci ratio: 8.148889e-02	ci left: 4.169972e-03	ci right 4.526046e-03	k: 2303	n:530000
Cons ci ratio: 1.641575e-03	ci left: 9.142062e-01	ci right 9.157100e-01	k: 484929	n:530000
KS ci ratio: 1.925820e-01	ci left: 7.059201e-04	ci right 8.581131e-04	k: 413	n:530000
TPTE2   530000 perm   216 sec   (2456 perm/sec)   p_kst 7.792453e-04   p_cons 9.149604e-01   p_joint 4.345283e-03

Joint ci ratio: 8.498972e-02	ci left: 3.757252e-03	ci right 4.092550e-03	k: 2118	n:540000
Cons ci ratio: 1.626335e-03	ci left: 9.142103e-01	ci right 9.157001e-01	k: 494077	n:540000
KS ci ratio: 1.918889e-01	ci left: 6.981354e-04	ci right 8.480451e-04	k: 416	n:540000
TPTE2   540000 perm   222 sec   (2432 perm/sec)   p_kst 7.703704e-04   p_cons 9.149574e-01   p_joint 3.922222e-03

Joint ci ratio: 8.439512e-02	ci left: 3.742327e-03	ci right 4.073842e-03	k: 2148	n:550000
Cons ci ratio: 1.611757e-03	ci left: 9.141905e-01	ci right 9.156669e-01	k: 503212	n:550000
KS ci ratio: 1.894064e-01	ci left: 7.044877e-04	ci right 8.535793e-04	k: 427	n:550000
TPTE2   550000 perm   228 sec   (2407 perm/sec)   p_kst 7.763636e-04   p_cons 9.149309e-01   p_joint 3.905455e-03

Joint ci ratio: 7.961208e-02	ci left: 4.139050e-03	ci right 4.483966e-03	k: 2413	n:560000
Cons ci ratio: 1.597875e-03	ci left: 9.141410e-01	ci right 9.156047e-01	k: 512330	n:560000
KS ci ratio: 1.868051e-01	ci left: 7.123274e-04	ci right 8.607729e-04	k: 439	n:560000
TPTE2   560000 perm   235 sec   (2383 perm/sec)   p_kst 7.839286e-04   p_cons 9.148750e-01   p_joint 4.308929e-03

Joint ci ratio: 8.303512e-02	ci left: 3.732970e-03	ci right 4.058069e-03	k: 2219	n:570000
Cons ci ratio: 1.584897e-03	ci left: 9.140388e-01	ci right 9.154903e-01	k: 521417	n:570000
KS ci ratio: 1.857531e-01	ci left: 7.081931e-04	ci right 8.548523e-04	k: 444	n:570000
TPTE2   570000 perm   242 sec   (2360 perm/sec)   p_kst 7.789474e-04   p_cons 9.147667e-01   p_joint 3.892982e-03

Joint ci ratio: 8.226041e-02	ci left: 3.739526e-03	ci right 4.062012e-03	k: 2261	n:580000
Cons ci ratio: 1.572055e-03	ci left: 9.139574e-01	ci right 9.153970e-01	k: 530514	n:580000
KS ci ratio: 1.837002e-01	ci left: 7.124272e-04	ci right 8.581511e-04	k: 454	n:580000
TPTE2   580000 perm   248 sec   (2337 perm/sec)   p_kst 7.827586e-04   p_cons 9.146793e-01   p_joint 3.898276e-03

Joint ci ratio: 8.159592e-02	ci left: 3.737571e-03	ci right 4.057161e-03	k: 2298	n:590000
Cons ci ratio: 1.558113e-03	ci left: 9.140201e-01	ci right 9.154470e-01	k: 539694	n:590000
KS ci ratio: 1.821062e-01	ci left: 7.132907e-04	ci right 8.577856e-04	k: 462	n:590000
TPTE2   590000 perm   255 sec   (2315 perm/sec)   p_kst 7.830508e-04   p_cons 9.147356e-01   p_joint 3.894915e-03

Joint ci ratio: 8.087779e-02	ci left: 3.742224e-03	ci right 4.059262e-03	k: 2339	n:600000
Cons ci ratio: 1.545344e-03	ci left: 9.139987e-01	ci right 9.154139e-01	k: 548825	n:600000
KS ci ratio: 1.805530e-01	ci left: 7.141307e-04	ci right 8.574270e-04	k: 470	n:600000
TPTE2   600000 perm   262 sec   (2292 perm/sec)   p_kst 7.833333e-04   p_cons 9.147083e-01   p_joint 3.898333e-03

Joint ci ratio: 8.016139e-02	ci left: 3.748343e-03	ci right 4.062955e-03	k: 2381	n:610000
Cons ci ratio: 1.533608e-03	ci left: 9.139041e-01	ci right 9.153084e-01	k: 557911	n:610000
KS ci ratio: 1.782954e-01	ci left: 7.212125e-04	ci right 8.639252e-04	k: 482	n:610000
TPTE2   610000 perm   269 sec   (2271 perm/sec)   p_kst 7.901639e-04   p_cons 9.146082e-01   p_joint 3.903279e-03

Joint ci ratio: 7.957914e-02	ci left: 3.743209e-03	ci right 4.055003e-03	k: 2416	n:620000
Cons ci ratio: 1.520924e-03	ci left: 9.139372e-01	ci right 9.153299e-01	k: 567074	n:620000
KS ci ratio: 1.764776e-01	ci left: 7.249931e-04	ci right 8.668352e-04	k: 492	n:620000
TPTE2   620000 perm   276 sec   (2249 perm/sec)   p_kst 7.935484e-04   p_cons 9.146355e-01   p_joint 3.896774e-03

Joint ci ratio: 7.897706e-02	ci left: 3.741359e-03	ci right 4.050532e-03	k: 2453	n:630000
Cons ci ratio: 1.508534e-03	ci left: 9.139709e-01	ci right 9.153523e-01	k: 576238	n:630000
KS ci ratio: 1.757665e-01	ci left: 7.195544e-04	ci right 8.597050e-04	k: 496	n:630000
TPTE2   630000 perm   283 sec   (2229 perm/sec)   p_kst 7.873016e-04   p_cons 9.146635e-01   p_joint 3.893651e-03

Joint ci ratio: 7.745746e-02	ci left: 3.831505e-03	ci right 4.141761e-03	k: 2550	n:640000
Cons ci ratio: 1.496652e-03	ci left: 9.139816e-01	ci right 9.153521e-01	k: 585388	n:640000
KS ci ratio: 1.736817e-01	ci left: 7.262416e-04	ci right 8.658410e-04	k: 508	n:640000
TPTE2   640000 perm   290 sec   (2208 perm/sec)   p_kst 7.937500e-04   p_cons 9.146688e-01   p_joint 3.984375e-03

Joint ci ratio: 7.681259e-02	ci left: 3.837437e-03	ci right 4.145471e-03	k: 2593	n:650000
Cons ci ratio: 1.606589e-03	ci left: 9.008394e-01	ci right 9.022893e-01	k: 586018	n:650000
KS ci ratio: 1.724997e-01	ci left: 7.253713e-04	ci right 8.637557e-04	k: 515	n:650000
TPTE2   650000 perm   297 sec   (2187 perm/sec)   p_kst 7.923077e-04   p_cons 9.015662e-01   p_joint 3.989231e-03

Joint ci ratio: 7.637281e-02	ci left: 3.823877e-03	ci right 4.128987e-03	k: 2623	n:660000
Cons ci ratio: 1.593972e-03	ci left: 9.008895e-01	ci right 9.023282e-01	k: 595063	n:660000
KS ci ratio: 1.716704e-01	ci left: 7.216302e-04	ci right 8.585704e-04	k: 520	n:660000
TPTE2   660000 perm   305 sec   (2167 perm/sec)   p_kst 7.878788e-04   p_cons 9.016106e-01   p_joint 3.974242e-03

Joint ci ratio: 7.581155e-02	ci left: 3.823906e-03	ci right 4.126677e-03	k: 2662	n:670000
Cons ci ratio: 1.582273e-03	ci left: 9.008678e-01	ci right 9.022959e-01	k: 604061	n:670000
KS ci ratio: 1.697264e-01	ci left: 7.280051e-04	ci right 8.644305e-04	k: 532	n:670000
TPTE2   670000 perm   312 sec   (2147 perm/sec)   p_kst 7.940299e-04   p_cons 9.015836e-01   p_joint 3.973134e-03

Joint ci ratio: 7.530446e-02	ci left: 3.819612e-03	ci right 4.119932e-03	k: 2698	n:680000
Cons ci ratio: 1.570346e-03	ci left: 9.009014e-01	ci right 9.023187e-01	k: 613096	n:680000
KS ci ratio: 1.687793e-01	ci left: 7.257488e-04	ci right 8.609154e-04	k: 538	n:680000
TPTE2   680000 perm   320 sec   (2127 perm/sec)   p_kst 7.911765e-04   p_cons 9.016118e-01   p_joint 3.967647e-03

Joint ci ratio: 7.479369e-02	ci left: 3.816872e-03	ci right 4.114852e-03	k: 2735	n:690000
Cons ci ratio: 1.559410e-03	ci left: 9.008512e-01	ci right 9.022585e-01	k: 622074	n:690000
KS ci ratio: 1.675405e-01	ci left: 7.263370e-04	ci right 8.605200e-04	k: 546	n:690000
TPTE2   690000 perm   327 sec   (2109 perm/sec)   p_kst 7.913043e-04   p_cons 9.015565e-01   p_joint 3.963768e-03

Joint ci ratio: 7.522486e-02	ci left: 3.718883e-03	ci right 4.010960e-03	k: 2704	n:700000
Cons ci ratio: 1.548612e-03	ci left: 9.008124e-01	ci right 9.022099e-01	k: 631059	n:700000
KS ci ratio: 1.672358e-01	ci left: 7.186980e-04	ci right 8.512039e-04	k: 548	n:700000
TPTE2   700000 perm   335 sec   (2090 perm/sec)   p_kst 7.828571e-04   p_cons 9.015129e-01   p_joint 3.862857e-03

Joint ci ratio: 7.470201e-02	ci left: 3.719023e-03	ci right 4.008992e-03	k: 2742	n:710000
Cons ci ratio: 1.538060e-03	ci left: 9.007720e-01	ci right 9.021599e-01	k: 640042	n:710000
KS ci ratio: 1.666303e-01	ci left: 7.139738e-04	ci right 8.450843e-04	k: 552	n:710000
TPTE2   710000 perm   343 sec   (2072 perm/sec)   p_kst 7.774648e-04   p_cons 9.014676e-01   p_joint 3.861972e-03

Joint ci ratio: 7.425697e-02	ci left: 3.712349e-03	ci right 3.999999e-03	k: 2775	n:720000
Cons ci ratio: 1.527445e-03	ci left: 9.007648e-01	ci right 9.021431e-01	k: 649048	n:720000
KS ci ratio: 1.654379e-01	ci left: 7.147069e-04	ci right 8.449194e-04	k: 560	n:720000
TPTE2   720000 perm   350 sec   (2055 perm/sec)   p_kst 7.777778e-04   p_cons 9.014556e-01   p_joint 3.854167e-03

Joint ci ratio: 7.590986e-02	ci left: 3.501527e-03	ci right 3.779147e-03	k: 2656	n:730000
Cons ci ratio: 1.516649e-03	ci left: 9.008045e-01	ci right 9.021731e-01	k: 658088	n:730000
KS ci ratio: 1.647059e-01	ci left: 7.114826e-04	ci right 8.404773e-04	k: 565	n:730000
TPTE2   730000 perm   358 sec   (2037 perm/sec)   p_kst 7.739726e-04   p_cons 9.014904e-01   p_joint 3.638356e-03

Joint ci ratio: 7.248682e-02	ci left: 3.793759e-03	ci right 4.080416e-03	k: 2912	n:740000
Cons ci ratio: 1.506469e-03	ci left: 9.007971e-01	ci right 9.021565e-01	k: 667094	n:740000
KS ci ratio: 1.628458e-01	ci left: 7.187158e-04	ci right 8.474062e-04	k: 578	n:740000
TPTE2   740000 perm   366 sec   (2020 perm/sec)   p_kst 7.810811e-04   p_cons 9.014784e-01   p_joint 3.935135e-03

Joint ci ratio: 7.208000e-02	ci left: 3.786380e-03	ci right 4.070806e-03	k: 2945	n:750000
Cons ci ratio: 1.496457e-03	ci left: 9.007940e-01	ci right 9.021443e-01	k: 676103	n:750000
KS ci ratio: 1.618703e-01	ci left: 7.180870e-04	ci right 8.458197e-04	k: 585	n:750000
TPTE2   750000 perm   375 sec   (2003 perm/sec)   p_kst 7.800000e-04   p_cons 9.014707e-01   p_joint 3.926667e-03

Joint ci ratio: 7.167995e-02	ci left: 3.779199e-03	ci right 4.061445e-03	k: 2978	n:760000
Cons ci ratio: 1.486840e-03	ci left: 9.007672e-01	ci right 9.021087e-01	k: 685094	n:760000
KS ci ratio: 1.610481e-01	ci left: 7.162142e-04	ci right 8.429040e-04	k: 591	n:760000
TPTE2   760000 perm   383 sec   (1987 perm/sec)   p_kst 7.776316e-04   p_cons 9.014395e-01   p_joint 3.918421e-03

Joint ci ratio: 7.115616e-02	ci left: 3.786242e-03	ci right 4.066861e-03	k: 3022	n:770000
Cons ci ratio: 1.477179e-03	ci left: 9.007684e-01	ci right 9.021013e-01	k: 694106	n:770000
KS ci ratio: 1.597047e-01	ci left: 7.193786e-04	ci right 8.454649e-04	k: 601	n:770000
TPTE2   770000 perm   391 sec   (1970 perm/sec)   p_kst 7.805195e-04   p_cons 9.014364e-01   p_joint 3.924675e-03

Joint ci ratio: 7.073637e-02	ci left: 3.783035e-03	ci right 4.061695e-03	k: 3058	n:780000
Cons ci ratio: 1.467715e-03	ci left: 9.007684e-01	ci right 9.020927e-01	k: 703117	n:780000
KS ci ratio: 1.587843e-01	ci left: 7.187725e-04	ci right 8.439573e-04	k: 608	n:780000
TPTE2   780000 perm   399 sec   (1954 perm/sec)   p_kst 7.794872e-04   p_cons 9.014321e-01   p_joint 3.920513e-03

Joint ci ratio: 7.040390e-02	ci left: 3.771209e-03	ci right 4.047638e-03	k: 3087	n:790000
Cons ci ratio: 1.458265e-03	ci left: 9.007887e-01	ci right 9.021045e-01	k: 712144	n:790000
KS ci ratio: 1.580080e-01	ci left: 7.169680e-04	ci right 8.411701e-04	k: 614	n:790000
TPTE2   790000 perm   408 sec   (1938 perm/sec)   p_kst 7.772152e-04   p_cons 9.014481e-01   p_joint 3.907595e-03

Joint ci ratio: 7.071665e-02	ci left: 3.690909e-03	ci right 3.962703e-03	k: 3060	n:800000
Cons ci ratio: 1.449259e-03	ci left: 9.007760e-01	ci right 9.020836e-01	k: 721145	n:800000
KS ci ratio: 1.571165e-01	ci left: 7.164109e-04	ci right 8.397502e-04	k: 621	n:800000
TPTE2   800000 perm   416 sec   (1921 perm/sec)   p_kst 7.762500e-04   p_cons 9.014313e-01   p_joint 3.825000e-03

Joint ci ratio: 7.025901e-02	ci left: 3.693855e-03	ci right 3.964034e-03	k: 3100	n:810000
Cons ci ratio: 1.439998e-03	ci left: 9.008156e-01	ci right 9.021149e-01	k: 730188	n:810000
KS ci ratio: 1.563643e-01	ci left: 7.146831e-04	ci right 8.370807e-04	k: 627	n:810000
TPTE2   810000 perm   425 sec   (1906 perm/sec)   p_kst 7.740741e-04   p_cons 9.014667e-01   p_joint 3.827160e-03

Joint ci ratio: 6.988835e-02	ci left: 3.688346e-03	ci right 3.956641e-03	k: 3133	n:820000
Cons ci ratio: 1.431472e-03	ci left: 9.007845e-01	ci right 9.020761e-01	k: 739174	n:820000
KS ci ratio: 1.551338e-01	ci left: 7.176874e-04	ci right 8.395423e-04	k: 637	n:820000
TPTE2   820000 perm   434 sec   (1890 perm/sec)   p_kst 7.768293e-04   p_cons 9.014317e-01   p_joint 3.820732e-03

Joint ci ratio: 6.945748e-02	ci left: 3.690077e-03	ci right 3.956777e-03	k: 3172	n:830000
Cons ci ratio: 1.422614e-03	ci left: 9.008146e-01	ci right 9.020982e-01	k: 748210	n:830000
KS ci ratio: 1.535766e-01	ci left: 7.240984e-04	ci right 8.456943e-04	k: 650	n:830000
TPTE2   830000 perm   443 sec   (1875 perm/sec)   p_kst 7.831325e-04   p_cons 9.014578e-01   p_joint 3.821687e-03

Joint ci ratio: 6.895910e-02	ci left: 3.699963e-03	ci right 3.965382e-03	k: 3218	n:840000
Cons ci ratio: 1.414230e-03	ci left: 9.008047e-01	ci right 9.020807e-01	k: 757213	n:840000
KS ci ratio: 1.525257e-01	ci left: 7.257822e-04	ci right 8.467507e-04	k: 659	n:840000
TPTE2   840000 perm   452 sec   (1860 perm/sec)   p_kst 7.845238e-04   p_cons 9.014440e-01   p_joint 3.830952e-03

Joint ci ratio: 6.856622e-02	ci left: 3.699215e-03	ci right 3.963008e-03	k: 3255	n:850000
Cons ci ratio: 1.405583e-03	ci left: 9.008469e-01	ci right 9.021151e-01	k: 766260	n:850000
KS ci ratio: 1.510450e-01	ci left: 7.319571e-04	ci right 8.526633e-04	k: 672	n:850000
TPTE2   850000 perm   460 sec   (1846 perm/sec)   p_kst 7.905882e-04   p_cons 9.014824e-01   p_joint 3.829412e-03

Joint ci ratio: 6.807630e-02	ci left: 3.709919e-03	ci right 3.972510e-03	k: 3302	n:860000
Cons ci ratio: 1.397395e-03	ci left: 9.008496e-01	ci right 9.021105e-01	k: 775274	n:860000
KS ci ratio: 1.501552e-01	ci left: 7.323977e-04	ci right 8.524012e-04	k: 680	n:860000
TPTE2   860000 perm   470 sec   (1831 perm/sec)   p_kst 7.906977e-04   p_cons 9.014814e-01   p_joint 3.839535e-03

Joint ci ratio: 6.960687e-02	ci left: 3.505724e-03	ci right 3.759667e-03	k: 3159	n:870000
Cons ci ratio: 1.389420e-03	ci left: 9.008431e-01	ci right 9.020967e-01	k: 784280	n:870000
KS ci ratio: 1.497164e-01	ci left: 7.284045e-04	ci right 8.473737e-04	k: 684	n:870000
TPTE2   870000 perm   479 sec   (1817 perm/sec)   p_kst 7.862069e-04   p_cons 9.014713e-01   p_joint 3.631034e-03

Joint ci ratio: 7.042947e-02	ci left: 3.384377e-03	ci right 3.632545e-03	k: 3086	n:880000
Cons ci ratio: 1.382004e-03	ci left: 9.007821e-01	ci right 9.020289e-01	k: 793238	n:880000
KS ci ratio: 1.489574e-01	ci left: 7.277844e-04	ci right 8.459960e-04	k: 691	n:880000
TPTE2   880000 perm   488 sec   (1803 perm/sec)   p_kst 7.852273e-04   p_cons 9.014068e-01   p_joint 3.506818e-03

Joint ci ratio: 6.686239e-02	ci left: 3.718527e-03	ci right 3.976853e-03	k: 3423	n:890000
Cons ci ratio: 1.374045e-03	ci left: 9.008081e-01	ci right 9.020478e-01	k: 802272	n:890000
KS ci ratio: 1.482097e-01	ci left: 7.271798e-04	ci right 8.446478e-04	k: 698	n:890000
TPTE2   890000 perm   497 sec   (1789 perm/sec)   p_kst 7.842697e-04   p_cons 9.014292e-01   p_joint 3.846067e-03

Joint ci ratio: 6.844707e-02	ci left: 3.506796e-03	ci right 3.756416e-03	k: 3267	n:900000
Cons ci ratio: 1.365734e-03	ci left: 9.008970e-01	ci right 9.021293e-01	k: 811363	n:900000
KS ci ratio: 1.475778e-01	ci left: 7.255200e-04	ci right 8.421761e-04	k: 704	n:900000
TPTE2   900000 perm   507 sec   (1775 perm/sec)   p_kst 7.822222e-04   p_cons 9.015144e-01   p_joint 3.630000e-03

Joint ci ratio: 6.807317e-02	ci left: 3.507145e-03	ci right 3.755372e-03	k: 3303	n:910000
Cons ci ratio: 1.358295e-03	ci left: 9.008892e-01	ci right 9.021148e-01	k: 820368	n:910000
KS ci ratio: 1.463373e-01	ci left: 7.302493e-04	ci right 8.465926e-04	k: 716	n:910000
TPTE2   910000 perm   517 sec   (1762 perm/sec)   p_kst 7.868132e-04   p_cons 9.015033e-01   p_joint 3.629670e-03

Joint ci ratio: 6.780728e-02	ci left: 3.496804e-03	ci right 3.743294e-03	k: 3329	n:920000
Cons ci ratio: 1.350777e-03	ci left: 9.009078e-01	ci right 9.021266e-01	k: 829397	n:920000
KS ci ratio: 1.454274e-01	ci left: 7.317374e-04	ci right 8.475299e-04	k: 725	n:920000
TPTE2   920000 perm   526 sec   (1749 perm/sec)   p_kst 7.880435e-04   p_cons 9.015185e-01   p_joint 3.618478e-03

Joint ci ratio: 6.749403e-02	ci left: 3.491973e-03	ci right 3.736941e-03	k: 3360	n:930000
Cons ci ratio: 1.343659e-03	ci left: 9.008893e-01	ci right 9.021017e-01	k: 838392	n:930000
KS ci ratio: 1.447314e-01	ci left: 7.311229e-04	ci right 8.462166e-04	k: 732	n:930000
TPTE2   930000 perm   536 sec   (1736 perm/sec)   p_kst 7.870968e-04   p_cons 9.014968e-01   p_joint 3.612903e-03

Joint ci ratio: 6.529005e-02	ci left: 3.695457e-03	ci right 3.945914e-03	k: 3590	n:940000
Cons ci ratio: 1.336573e-03	ci left: 9.008820e-01	ci right 9.020879e-01	k: 847397	n:940000
KS ci ratio: 1.438508e-01	ci left: 7.325738e-04	ci right 8.471341e-04	k: 741	n:940000
TPTE2   940000 perm   546 sec   (1723 perm/sec)   p_kst 7.882979e-04   p_cons 9.014862e-01   p_joint 3.819149e-03

Joint ci ratio: 6.425776e-02	ci left: 3.776690e-03	ci right 4.028455e-03	k: 3706	n:950000
Cons ci ratio: 1.329542e-03	ci left: 9.008821e-01	ci right 9.020817e-01	k: 856409	n:950000
KS ci ratio: 1.424180e-01	ci left: 7.400868e-04	ci right 8.545712e-04	k: 756	n:950000
TPTE2   950000 perm   556 sec   (1710 perm/sec)   p_kst 7.957895e-04   p_cons 9.014832e-01   p_joint 3.901053e-03

Joint ci ratio: 6.387105e-02	ci left: 3.783474e-03	ci right 4.034117e-03	k: 3751	n:960000
Cons ci ratio: 1.322606e-03	ci left: 9.008844e-01	ci right 9.020777e-01	k: 865423	n:960000
KS ci ratio: 1.413942e-01	ci left: 7.434292e-04	ci right 8.575342e-04	k: 767	n:960000
TPTE2   960000 perm   566 sec   (1698 perm/sec)   p_kst 7.989583e-04   p_cons 9.014823e-01   p_joint 3.907292e-03

Joint ci ratio: 6.354167e-02	ci left: 3.784035e-03	ci right 4.033375e-03	k: 3790	n:970000
Cons ci ratio: 1.315570e-03	ci left: 9.009146e-01	ci right 9.021016e-01	k: 874464	n:970000
KS ci ratio: 1.409363e-01	ci left: 7.407374e-04	ci right 8.540303e-04	k: 772	n:970000
TPTE2   970000 perm   576 sec   (1685 perm/sec)   p_kst 7.958763e-04   p_cons 9.015093e-01   p_joint 3.907216e-03

Joint ci ratio: 6.319249e-02	ci left: 3.787600e-03	ci right 4.035754e-03	k: 3832	n:980000
Cons ci ratio: 1.308902e-03	ci left: 9.009093e-01	ci right 9.020903e-01	k: 883471	n:980000
KS ci ratio: 1.402127e-01	ci left: 7.410551e-04	ci right 8.537659e-04	k: 780	n:980000
TPTE2   980000 perm   586 sec   (1673 perm/sec)   p_kst 7.959184e-04   p_cons 9.015010e-01   p_joint 3.910204e-03

Joint ci ratio: 6.368769e-02	ci left: 3.690685e-03	ci right 3.934454e-03	k: 3773	n:990000
Cons ci ratio: 1.302363e-03	ci left: 9.009002e-01	ci right 9.020752e-01	k: 892474	n:990000
KS ci ratio: 1.399445e-01	ci left: 7.364936e-04	ci right 8.482786e-04	k: 783	n:990000
TPTE2   990000 perm   596 sec   (1661 perm/sec)   p_kst 7.909091e-04   p_cons 9.014889e-01   p_joint 3.811111e-03

Joint ci ratio: 6.502553e-02	ci left: 3.503229e-03	ci right 3.739660e-03	k: 3620	n:1000000
Cons ci ratio: 1.295419e-03	ci left: 9.009604e-01	ci right 9.021293e-01	k: 901546	n:1000000
KS ci ratio: 1.391480e-01	ci left: 7.378145e-04	ci right 8.491098e-04	k: 792	n:1000000
TPTE2   1000000 perm   606 sec   (1650 perm/sec)   p_kst 7.920000e-04   p_cons 9.015460e-01   p_joint 3.620000e-03

Joint ci ratio: 6.470468e-02	ci left: 3.503609e-03	ci right 3.738855e-03	k: 3656	n:1010000
Cons ci ratio: 1.289352e-03	ci left: 9.009132e-01	ci right 9.020765e-01	k: 910511	n:1010000
KS ci ratio: 1.383650e-01	ci left: 7.391110e-04	ci right 8.499228e-04	k: 801	n:1010000
TPTE2   1010000 perm   617 sec   (1638 perm/sec)   p_kst 7.930693e-04   p_cons 9.014960e-01   p_joint 3.619802e-03

Joint ci ratio: 6.267429e-02	ci left: 3.700820e-03	ci right 3.941227e-03	k: 3896	n:1020000
Cons ci ratio: 1.282797e-03	ci left: 9.009466e-01	ci right 9.021040e-01	k: 919557	n:1020000
KS ci ratio: 1.375102e-01	ci left: 7.413305e-04	ci right 8.517322e-04	k: 811	n:1020000
TPTE2   1020000 perm   627 sec   (1627 perm/sec)   p_kst 7.950980e-04   p_cons 9.015265e-01   p_joint 3.819608e-03

Joint ci ratio: 6.233120e-02	ci left: 3.705985e-03	ci right 3.945363e-03	k: 3939	n:1030000
Cons ci ratio: 1.276088e-03	ci left: 9.010144e-01	ci right 9.021659e-01	k: 928639	n:1030000
KS ci ratio: 1.367543e-01	ci left: 7.425712e-04	ci right 8.525003e-04	k: 820	n:1030000
TPTE2   1030000 perm   638 sec   (1615 perm/sec)   p_kst 7.961165e-04   p_cons 9.015913e-01   p_joint 3.824272e-03

Joint ci ratio: 6.210335e-02	ci left: 3.697801e-03	ci right 3.935745e-03	k: 3968	n:1040000
Cons ci ratio: 1.269841e-03	ci left: 9.010308e-01	ci right 9.021766e-01	k: 937669	n:1040000
KS ci ratio: 1.363400e-01	ci left: 7.400745e-04	ci right 8.492751e-04	k: 825	n:1040000
TPTE2   1040000 perm   648 sec   (1604 perm/sec)   p_kst 7.932692e-04   p_cons 9.016048e-01   p_joint 3.815385e-03

Joint ci ratio: 6.191685e-02	ci left: 3.685085e-03	ci right 3.921474e-03	k: 3992	n:1050000
Cons ci ratio: 1.263936e-03	ci left: 9.010115e-01	ci right 9.021520e-01	k: 946662	n:1050000
KS ci ratio: 1.358476e-01	ci left: 7.385459e-04	ci right 8.470956e-04	k: 831	n:1050000
TPTE2   1050000 perm   659 sec   (1593 perm/sec)   p_kst 7.914286e-04   p_cons 9.015829e-01   p_joint 3.801905e-03

Joint ci ratio: 6.157068e-02	ci left: 3.692118e-03	ci right 3.927587e-03	k: 4037	n:1060000
Cons ci ratio: 1.257779e-03	ci left: 9.010399e-01	ci right 9.021749e-01	k: 955705	n:1060000
KS ci ratio: 1.351992e-01	ci left: 7.388697e-04	ci right 8.469070e-04	k: 839	n:1060000
TPTE2   1060000 perm   670 sec   (1583 perm/sec)   p_kst 7.915094e-04   p_cons 9.016085e-01   p_joint 3.808491e-03

Joint ci ratio: 6.413314e-02	ci left: 3.367826e-03	ci right 3.591884e-03	k: 3722	n:1070000
Cons ci ratio: 1.251677e-03	ci left: 9.010725e-01	ci right 9.022020e-01	k: 964753	n:1070000
KS ci ratio: 1.349587e-01	ci left: 7.346733e-04	ci right 8.418905e-04	k: 842	n:1070000
TPTE2   1070000 perm   680 sec   (1573 perm/sec)   p_kst 7.869159e-04   p_cons 9.016383e-01   p_joint 3.478505e-03

Joint ci ratio: 6.388498e-02	ci left: 3.363065e-03	ci right 3.585908e-03	k: 3751	n:1080000
Cons ci ratio: 1.246014e-03	ci left: 9.010543e-01	ci right 9.021787e-01	k: 973747	n:1080000
KS ci ratio: 1.344811e-01	ci left: 7.332391e-04	ci right 8.398380e-04	k: 848	n:1080000
TPTE2   1080000 perm   691 sec   (1562 perm/sec)   p_kst 7.851852e-04   p_cons 9.016176e-01   p_joint 3.473148e-03

Joint ci ratio: 6.357223e-02	ci left: 3.365615e-03	ci right 3.587495e-03	k: 3788	n:1090000
Cons ci ratio: 1.240145e-03	ci left: 9.010770e-01	ci right 9.021961e-01	k: 982785	n:1090000
KS ci ratio: 1.338519e-01	ci left: 7.336052e-04	ci right 8.397187e-04	k: 856	n:1090000
TPTE2   1090000 perm   702 sec   (1552 perm/sec)   p_kst 7.853211e-04   p_cons 9.016376e-01   p_joint 3.475229e-03

Joint ci ratio: 6.323086e-02	ci left: 3.371701e-03	ci right 3.592745e-03	k: 3829	n:1100000
Cons ci ratio: 1.234447e-03	ci left: 9.010865e-01	ci right 9.022004e-01	k: 991809	n:1100000
KS ci ratio: 1.332315e-01	ci left: 7.339658e-04	ci right 8.396004e-04	k: 864	n:1100000
TPTE2   1100000 perm   714 sec   (1541 perm/sec)   p_kst 7.854545e-04   p_cons 9.016445e-01   p_joint 3.480909e-03

Joint ci ratio: 6.295208e-02	ci left: 3.371472e-03	ci right 3.591491e-03	k: 3863	n:1110000
Cons ci ratio: 1.229008e-03	ci left: 9.010697e-01	ci right 9.021787e-01	k: 1000804	n:1110000
KS ci ratio: 1.326957e-01	ci left: 7.334500e-04	ci right 8.385524e-04	k: 871	n:1110000
TPTE2   1110000 perm   725 sec   (1531 perm/sec)   p_kst 7.846847e-04   p_cons 9.016252e-01   p_joint 3.480180e-03

Joint ci ratio: 6.264471e-02	ci left: 3.374766e-03	ci right 3.593886e-03	k: 3901	n:1120000
Cons ci ratio: 1.223473e-03	ci left: 9.010773e-01	ci right 9.021813e-01	k: 1009826	n:1120000
KS ci ratio: 1.323171e-01	ci left: 7.312176e-04	ci right 8.356776e-04	k: 876	n:1120000
TPTE2   1120000 perm   736 sec   (1521 perm/sec)   p_kst 7.821429e-04   p_cons 9.016304e-01   p_joint 3.483036e-03

Joint ci ratio: 6.231799e-02	ci left: 3.380617e-03	ci right 3.598931e-03	k: 3942	n:1130000
Cons ci ratio: 1.218001e-03	ci left: 9.010866e-01	ci right 9.021857e-01	k: 1018850	n:1130000
KS ci ratio: 1.315690e-01	ci left: 7.333042e-04	ci right 8.374237e-04	k: 886	n:1130000
TPTE2   1130000 perm   748 sec   (1511 perm/sec)   p_kst 7.840708e-04   p_cons 9.016372e-01   p_joint 3.488496e-03

Joint ci ratio: 6.198072e-02	ci left: 3.388096e-03	ci right 3.605666e-03	k: 3985	n:1140000
Cons ci ratio: 1.212697e-03	ci left: 9.010817e-01	ci right 9.021759e-01	k: 1027858	n:1140000
KS ci ratio: 1.308334e-01	ci left: 7.353558e-04	ci right 8.391375e-04	k: 896	n:1140000
TPTE2   1140000 perm   759 sec   (1501 perm/sec)   p_kst 7.859649e-04   p_cons 9.016298e-01   p_joint 3.495614e-03

Joint ci ratio: 6.168730e-02	ci left: 3.391168e-03	ci right 3.607867e-03	k: 4023	n:1150000
Cons ci ratio: 1.207368e-03	ci left: 9.010908e-01	ci right 9.021802e-01	k: 1036882	n:1150000
KS ci ratio: 1.301101e-01	ci left: 7.373732e-04	ci right 8.408199e-04	k: 906	n:1150000
TPTE2   1150000 perm   771 sec   (1492 perm/sec)   p_kst 7.878261e-04   p_cons 9.016365e-01   p_joint 3.498261e-03

Joint ci ratio: 6.143595e-02	ci left: 3.389944e-03	ci right 3.605651e-03	k: 4056	n:1160000
Cons ci ratio: 1.202224e-03	ci left: 9.010825e-01	ci right 9.021673e-01	k: 1045886	n:1160000
KS ci ratio: 1.296819e-01	ci left: 7.360209e-04	ci right 8.389119e-04	k: 912	n:1160000
TPTE2   1160000 perm   783 sec   (1482 perm/sec)   p_kst 7.862069e-04   p_cons 9.016259e-01   p_joint 3.496552e-03

Joint ci ratio: 6.121019e-02	ci left: 3.386217e-03	ci right 3.600867e-03	k: 4086	n:1170000
Cons ci ratio: 1.197025e-03	ci left: 9.010923e-01	ci right 9.021724e-01	k: 1054911	n:1170000
KS ci ratio: 1.291877e-01	ci left: 7.355193e-04	ci right 8.379182e-04	k: 919	n:1170000
TPTE2   1170000 perm   795 sec   (1472 perm/sec)   p_kst 7.854701e-04   p_cons 9.016333e-01   p_joint 3.492308e-03

Joint ci ratio: 6.094976e-02	ci left: 3.386729e-03	ci right 3.600466e-03	k: 4121	n:1180000
Cons ci ratio: 1.192001e-03	ci left: 9.010858e-01	ci right 9.021614e-01	k: 1063917	n:1180000
KS ci ratio: 1.286991e-01	ci left: 7.350269e-04	ci right 8.369407e-04	k: 926	n:1180000
TPTE2   1180000 perm   807 sec   (1463 perm/sec)   p_kst 7.847458e-04   p_cons 9.016246e-01   p_joint 3.492373e-03

Joint ci ratio: 6.064873e-02	ci left: 3.392199e-03	ci right 3.605187e-03	k: 4162	n:1190000
Cons ci ratio: 1.186803e-03	ci left: 9.011148e-01	ci right 9.021857e-01	k: 1072965	n:1190000
KS ci ratio: 1.280103e-01	ci left: 7.369838e-04	ci right 8.385806e-04	k: 936	n:1190000
TPTE2   1190000 perm   819 sec   (1454 perm/sec)   p_kst 7.865546e-04   p_cons 9.016513e-01   p_joint 3.497479e-03

Joint ci ratio: 6.036652e-02	ci left: 3.395939e-03	ci right 3.608135e-03	k: 4201	n:1200000
Cons ci ratio: 1.181868e-03	ci left: 9.011141e-01	ci right 9.021806e-01	k: 1081978	n:1200000
KS ci ratio: 1.273999e-01	ci left: 7.381027e-04	ci right 8.393318e-04	k: 945	n:1200000
TPTE2   1200000 perm   831 sec   (1445 perm/sec)   p_kst 7.875000e-04   p_cons 9.016483e-01   p_joint 3.500833e-03

Joint ci ratio: 6.013804e-02	ci left: 3.393921e-03	ci right 3.605160e-03	k: 4233	n:1210000
Cons ci ratio: 1.176856e-03	ci left: 9.011342e-01	ci right 9.021961e-01	k: 1091016	n:1210000
KS ci ratio: 1.268646e-01	ci left: 7.384040e-04	ci right 8.392169e-04	k: 953	n:1210000
TPTE2   1210000 perm   843 sec   (1436 perm/sec)   p_kst 7.876033e-04   p_cons 9.016661e-01   p_joint 3.498347e-03

Joint ci ratio: 5.991919e-02	ci left: 3.391131e-03	ci right 3.601401e-03	k: 4264	n:1220000
Cons ci ratio: 1.172113e-03	ci left: 9.011227e-01	ci right 9.021803e-01	k: 1100016	n:1220000
KS ci ratio: 1.265336e-01	ci left: 7.363199e-04	ci right 8.365664e-04	k: 958	n:1220000
TPTE2   1220000 perm   855 sec   (1427 perm/sec)   p_kst 7.852459e-04   p_cons 9.016525e-01   p_joint 3.495082e-03

Joint ci ratio: 5.957065e-02	ci left: 3.403604e-03	ci right 3.613379e-03	k: 4314	n:1230000
Cons ci ratio: 1.167357e-03	ci left: 9.011220e-01	ci right 9.021753e-01	k: 1109029	n:1230000
KS ci ratio: 1.259439e-01	ci left: 7.374196e-04	ci right 8.373130e-04	k: 967	n:1230000
TPTE2   1230000 perm   867 sec   (1418 perm/sec)   p_kst 7.861789e-04   p_cons 9.016496e-01   p_joint 3.507317e-03

Joint ci ratio: 5.933737e-02	ci left: 3.403168e-03	ci right 3.612065e-03	k: 4348	n:1240000
Cons ci ratio: 1.162617e-03	ci left: 9.011278e-01	ci right 9.021768e-01	k: 1118050	n:1240000
KS ci ratio: 1.254911e-01	ci left: 7.369403e-04	ci right 8.363831e-04	k: 974	n:1240000
TPTE2   1240000 perm   880 sec   (1409 perm/sec)   p_kst 7.854839e-04   p_cons 9.016532e-01   p_joint 3.506452e-03

Joint ci ratio: 5.910680e-02	ci left: 3.402739e-03	ci right 3.610772e-03	k: 4382	n:1250000
Cons ci ratio: 1.157975e-03	ci left: 9.011270e-01	ci right 9.021719e-01	k: 1127063	n:1250000
KS ci ratio: 1.251068e-01	ci left: 7.356943e-04	ci right 8.346424e-04	k: 980	n:1250000
TPTE2   1250000 perm   892 sec   (1401 perm/sec)   p_kst 7.840000e-04   p_cons 9.016504e-01   p_joint 3.505600e-03

Joint ci ratio: 5.891236e-02	ci left: 3.398410e-03	ci right 3.605470e-03	k: 4411	n:1260000
Cons ci ratio: 1.153611e-03	ci left: 9.010921e-01	ci right 9.021330e-01	k: 1136033	n:1260000
KS ci ratio: 1.245998e-01	ci left: 7.360064e-04	ci right 8.345657e-04	k: 988	n:1260000
TPTE2   1260000 perm   905 sec   (1393 perm/sec)   p_kst 7.841270e-04   p_cons 9.016135e-01   p_joint 3.500794e-03

Joint ci ratio: 5.869332e-02	ci left: 3.397253e-03	ci right 3.603447e-03	k: 4444	n:1270000
Cons ci ratio: 1.149081e-03	ci left: 9.010909e-01	ci right 9.021277e-01	k: 1145045	n:1270000
KS ci ratio: 1.242236e-01	ci left: 7.347884e-04	ci right 8.328657e-04	k: 994	n:1270000
TPTE2   1270000 perm   917 sec   (1384 perm/sec)   p_kst 7.826772e-04   p_cons 9.016102e-01   p_joint 3.499213e-03

Joint ci ratio: 5.844396e-02	ci left: 3.399964e-03	ci right 3.605417e-03	k: 4482	n:1280000
Cons ci ratio: 1.144690e-03	ci left: 9.010764e-01	ci right 9.021092e-01	k: 1154040	n:1280000
KS ci ratio: 1.239128e-01	ci left: 7.328328e-04	ci right 8.303864e-04	k: 999	n:1280000
TPTE2   1280000 perm   930 sec   (1376 perm/sec)   p_kst 7.804688e-04   p_cons 9.015937e-01   p_joint 3.501562e-03

Joint ci ratio: 5.828191e-02	ci left: 3.392705e-03	ci right 3.597131e-03	k: 4507	n:1290000
Cons ci ratio: 1.140673e-03	ci left: 9.010117e-01	ci right 9.020408e-01	k: 1162970	n:1290000
KS ci ratio: 1.237276e-01	ci left: 7.294054e-04	ci right 8.263470e-04	k: 1002	n:1290000
TPTE2   1290000 perm   943 sec   (1368 perm/sec)   p_kst 7.767442e-04   p_cons 9.015271e-01   p_joint 3.493798e-03

Joint ci ratio: 5.800574e-02	ci left: 3.399203e-03	ci right 3.603018e-03	k: 4550	n:1300000
Cons ci ratio: 1.136308e-03	ci left: 9.010088e-01	ci right 9.020340e-01	k: 1171979	n:1300000
KS ci ratio: 1.228727e-01	ci left: 7.342318e-04	ci right 8.310916e-04	k: 1016	n:1300000
TPTE2   1300000 perm   956 sec   (1360 perm/sec)   p_kst 7.815385e-04   p_cons 9.015223e-01   p_joint 3.500000e-03

Joint ci ratio: 5.777765e-02	ci left: 3.400338e-03	ci right 3.603393e-03	k: 4586	n:1310000
Cons ci ratio: 1.132100e-03	ci left: 9.009892e-01	ci right 9.020105e-01	k: 1180966	n:1310000
KS ci ratio: 1.225119e-01	ci left: 7.330665e-04	ci right 8.294680e-04	k: 1022	n:1310000
TPTE2   1310000 perm   969 sec   (1352 perm/sec)   p_kst 7.801527e-04   p_cons 9.015008e-01   p_joint 3.500763e-03

Joint ci ratio: 5.750232e-02	ci left: 3.407432e-03	ci right 3.609908e-03	k: 4630	n:1320000
Cons ci ratio: 1.127794e-03	ci left: 9.009927e-01	ci right 9.020101e-01	k: 1189983	n:1320000
KS ci ratio: 1.219765e-01	ci left: 7.341227e-04	ci right 8.302107e-04	k: 1031	n:1320000
TPTE2   1320000 perm   982 sec   (1345 perm/sec)   p_kst 7.810606e-04   p_cons 9.015023e-01   p_joint 3.507576e-03

Joint ci ratio: 5.728625e-02	ci left: 3.407750e-03	ci right 3.609459e-03	k: 4665	n:1330000
Cons ci ratio: 1.123351e-03	ci left: 9.010255e-01	ci right 9.020389e-01	k: 1199039	n:1330000
KS ci ratio: 1.217410e-01	ci left: 7.315188e-04	ci right 8.270678e-04	k: 1035	n:1330000
TPTE2   1330000 perm   995 sec   (1337 perm/sec)   p_kst 7.781955e-04   p_cons 9.015331e-01   p_joint 3.507519e-03

Joint ci ratio: 5.706651e-02	ci left: 3.408801e-03	ci right 3.609773e-03	k: 4701	n:1340000
Cons ci ratio: 1.119318e-03	ci left: 9.010009e-01	ci right 9.020107e-01	k: 1208019	n:1340000
KS ci ratio: 1.214484e-01	ci left: 7.296775e-04	ci right 8.247404e-04	k: 1040	n:1340000
TPTE2   1340000 perm   1008 sec   (1329 perm/sec)   p_kst 7.761194e-04   p_cons 9.015067e-01   p_joint 3.508209e-03

Joint ci ratio: 5.681319e-02	ci left: 3.414219e-03	ci right 3.614587e-03	k: 4743	n:1350000
Cons ci ratio: 1.115393e-03	ci left: 9.009664e-01	ci right 9.019726e-01	k: 1216985	n:1350000
KS ci ratio: 1.209844e-01	ci left: 7.300187e-04	ci right 8.247368e-04	k: 1048	n:1350000
TPTE2   1350000 perm   1021 sec   (1322 perm/sec)   p_kst 7.762963e-04   p_cons 9.014704e-01   p_joint 3.513333e-03

Joint ci ratio: 5.665833e-02	ci left: 3.407960e-03	ci right 3.607399e-03	k: 4769	n:1360000
Cons ci ratio: 1.111670e-03	ci left: 9.009066e-01	ci right 9.019094e-01	k: 1225916	n:1360000
KS ci ratio: 1.205257e-01	ci left: 7.303556e-04	ci right 8.247325e-04	k: 1056	n:1360000
TPTE2   1360000 perm   1034 sec   (1315 perm/sec)   p_kst 7.764706e-04   p_cons 9.014088e-01   p_joint 3.506618e-03

Joint ci ratio: 5.645160e-02	ci left: 3.408271e-03	ci right 3.606976e-03	k: 4804	n:1370000
Cons ci ratio: 1.107824e-03	ci left: 9.008732e-01	ci right 9.018725e-01	k: 1234882	n:1370000
KS ci ratio: 1.200158e-01	ci left: 7.313963e-04	ci right 8.254794e-04	k: 1065	n:1370000
TPTE2   1370000 perm   1048 sec   (1308 perm/sec)   p_kst 7.773723e-04   p_cons 9.013737e-01   p_joint 3.506569e-03

Joint ci ratio: 5.621799e-02	ci left: 3.412151e-03	ci right 3.610232e-03	k: 4844	n:1380000
Cons ci ratio: 1.103756e-03	ci left: 9.008825e-01	ci right 9.018781e-01	k: 1243906	n:1380000
KS ci ratio: 1.192351e-01	ci left: 7.359378e-04	ci right 8.299459e-04	k: 1079	n:1380000
TPTE2   1380000 perm   1061 sec   (1300 perm/sec)   p_kst 7.818841e-04   p_cons 9.013812e-01   p_joint 3.510145e-03

Joint ci ratio: 5.600451e-02	ci left: 3.413848e-03	ci right 3.611251e-03	k: 4881	n:1390000
Cons ci ratio: 1.099618e-03	ci left: 9.009104e-01	ci right 9.019023e-01	k: 1252956	n:1390000
KS ci ratio: 1.186868e-01	ci left: 7.376235e-04	ci right 8.313832e-04	k: 1089	n:1390000
TPTE2   1390000 perm   1075 sec   (1293 perm/sec)   p_kst 7.834532e-04   p_cons 9.014072e-01   p_joint 3.511511e-03

Joint ci ratio: 5.579914e-02	ci left: 3.414818e-03	ci right 3.611530e-03	k: 4917	n:1400000
Cons ci ratio: 1.095816e-03	ci left: 9.008907e-01	ci right 9.018791e-01	k: 1261940	n:1400000
KS ci ratio: 1.183615e-01	ci left: 7.365134e-04	ci right 8.298575e-04	k: 1095	n:1400000
TPTE2   1400000 perm   1089 sec   (1286 perm/sec)   p_kst 7.821429e-04   p_cons 9.013857e-01   p_joint 3.512143e-03

Joint ci ratio: 5.560164e-02	ci left: 3.415077e-03	ci right 3.611085e-03	k: 4952	n:1410000
Cons ci ratio: 1.092097e-03	ci left: 9.008641e-01	ci right 9.018492e-01	k: 1270914	n:1410000
KS ci ratio: 1.180389e-01	ci left: 7.354193e-04	ci right 8.283531e-04	k: 1101	n:1410000
TPTE2   1410000 perm   1102 sec   (1279 perm/sec)   p_kst 7.808511e-04   p_cons 9.013574e-01   p_joint 3.512057e-03

Joint ci ratio: 5.543412e-02	ci left: 3.411860e-03	ci right 3.607075e-03	k: 4982	n:1420000
Cons ci ratio: 1.088419e-03	ci left: 9.008372e-01	ci right 9.018189e-01	k: 1279887	n:1420000
KS ci ratio: 1.176659e-01	ci left: 7.350246e-04	ci right 8.275945e-04	k: 1108	n:1420000
TPTE2   1420000 perm   1116 sec   (1273 perm/sec)   p_kst 7.802817e-04   p_cons 9.013289e-01   p_joint 3.508451e-03

Joint ci ratio: 5.526256e-02	ci left: 3.409379e-03	ci right 3.603829e-03	k: 5013	n:1430000
Cons ci ratio: 1.084736e-03	ci left: 9.008177e-01	ci right 9.017961e-01	k: 1288870	n:1430000
KS ci ratio: 1.175072e-01	ci left: 7.319207e-04	ci right 8.239668e-04	k: 1111	n:1430000
TPTE2   1430000 perm   1129 sec   (1266 perm/sec)   p_kst 7.769231e-04   p_cons 9.013077e-01   p_joint 3.505594e-03

Joint ci ratio: 5.507069e-02	ci left: 3.409673e-03	ci right 3.603443e-03	k: 5048	n:1440000
Cons ci ratio: 1.081027e-03	ci left: 9.008089e-01	ci right 9.017839e-01	k: 1297868	n:1440000
KS ci ratio: 1.171916e-01	ci left: 7.308822e-04	ci right 8.225337e-04	k: 1117	n:1440000
TPTE2   1440000 perm   1143 sec   (1259 perm/sec)   p_kst 7.756944e-04   p_cons 9.012972e-01   p_joint 3.505556e-03

Joint ci ratio: 5.489164e-02	ci left: 3.408604e-03	ci right 3.601663e-03	k: 5081	n:1450000
Cons ci ratio: 1.077493e-03	ci left: 9.007774e-01	ci right 9.017492e-01	k: 1306833	n:1450000
KS ci ratio: 1.169305e-01	ci left: 7.291889e-04	ci right 8.204103e-04	k: 1122	n:1450000
TPTE2   1450000 perm   1157 sec   (1253 perm/sec)   p_kst 7.737931e-04   p_cons 9.012641e-01   p_joint 3.504138e-03

Joint ci ratio: 5.474655e-02	ci left: 3.403497e-03	ci right 3.595741e-03	k: 5108	n:1460000
Cons ci ratio: 1.074043e-03	ci left: 9.007382e-01	ci right 9.017068e-01	k: 1315786	n:1460000
KS ci ratio: 1.165678e-01	ci left: 7.288490e-04	ci right 8.197255e-04	k: 1129	n:1460000
TPTE2   1460000 perm   1172 sec   (1246 perm/sec)   p_kst 7.732877e-04   p_cons 9.012233e-01   p_joint 3.498630e-03

Joint ci ratio: 5.455998e-02	ci left: 3.403828e-03	ci right 3.595415e-03	k: 5143	n:1470000
Cons ci ratio: 1.070409e-03	ci left: 9.007356e-01	ci right 9.017009e-01	k: 1324792	n:1470000
KS ci ratio: 1.163622e-01	ci left: 7.265326e-04	ci right 8.169496e-04	k: 1133	n:1470000
TPTE2   1470000 perm   1186 sec   (1239 perm/sec)   p_kst 7.707483e-04   p_cons 9.012190e-01   p_joint 3.498639e-03

Joint ci ratio: 5.457128e-02	ci left: 3.379495e-03	ci right 3.569753e-03	k: 5141	n:1480000
Cons ci ratio: 9.866736e-04	ci left: 9.138221e-01	ci right 9.147249e-01	k: 1353126	n:1480000
KS ci ratio: 1.161066e-01	ci left: 7.249037e-04	ci right 8.149062e-04	k: 1138	n:1480000
TPTE2   1480000 perm   1201 sec   (1233 perm/sec)   p_kst 7.689189e-04   p_cons 9.142743e-01   p_joint 3.473649e-03

Joint ci ratio: 5.437069e-02	ci left: 3.381970e-03	ci right 3.571646e-03	k: 5179	n:1490000
Cons ci ratio: 9.834486e-04	ci left: 9.138090e-01	ci right 9.147088e-01	k: 1362247	n:1490000
KS ci ratio: 1.157515e-01	ci left: 7.246004e-04	ci right 8.142712e-04	k: 1145	n:1490000
TPTE2   1490000 perm   1215 sec   (1227 perm/sec)   p_kst 7.684564e-04   p_cons 9.142597e-01   p_joint 3.475839e-03

Joint ci ratio: 5.415667e-02	ci left: 3.386386e-03	ci right 3.575539e-03	k: 5220	n:1500000
Cons ci ratio: 9.801382e-04	ci left: 9.138148e-01	ci right 9.147116e-01	k: 1371396	n:1500000
KS ci ratio: 1.153495e-01	ci left: 7.249489e-04	ci right 8.143302e-04	k: 1153	n:1500000
TPTE2   1500000 perm   1229 sec   (1220 perm/sec)   p_kst 7.686667e-04   p_cons 9.142640e-01   p_joint 3.480000e-03

Joint ci ratio: 5.396060e-02	ci left: 3.388786e-03	ci right 3.577365e-03	k: 5258	n:1510000
Cons ci ratio: 9.767167e-04	ci left: 9.138438e-01	ci right 9.147374e-01	k: 1380580	n:1510000
KS ci ratio: 1.150013e-01	ci left: 7.246501e-04	ci right 8.137065e-04	k: 1160	n:1510000
TPTE2   1510000 perm   1244 sec   (1214 perm/sec)   p_kst 7.682119e-04   p_cons 9.142914e-01   p_joint 3.482119e-03

Joint ci ratio: 5.377173e-02	ci left: 3.390505e-03	ci right 3.578500e-03	k: 5295	n:1520000
Cons ci ratio: 9.735104e-04	ci left: 9.138433e-01	ci right 9.147340e-01	k: 1389720	n:1520000
KS ci ratio: 1.147054e-01	ci left: 7.237166e-04	ci right 8.124139e-04	k: 1166	n:1520000
TPTE2   1520000 perm   1259 sec   (1208 perm/sec)   p_kst 7.671053e-04   p_cons 9.142895e-01   p_joint 3.483553e-03

Joint ci ratio: 5.360501e-02	ci left: 3.389624e-03	ci right 3.576969e-03	k: 5328	n:1530000
Cons ci ratio: 9.703718e-04	ci left: 9.138370e-01	ci right 9.147248e-01	k: 1398851	n:1530000
KS ci ratio: 1.142170e-01	ci left: 7.253353e-04	ci right 8.138270e-04	k: 1176	n:1530000
TPTE2   1530000 perm   1273 sec   (1202 perm/sec)   p_kst 7.686275e-04   p_cons 9.142817e-01   p_joint 3.482353e-03

Joint ci ratio: 5.340986e-02	ci left: 3.392600e-03	ci right 3.579405e-03	k: 5367	n:1540000
Cons ci ratio: 9.673156e-04	ci left: 9.138223e-01	ci right 9.147073e-01	k: 1407969	n:1540000
KS ci ratio: 1.136868e-01	ci left: 7.275647e-04	ci right 8.158887e-04	k: 1187	n:1540000
TPTE2   1540000 perm   1288 sec   (1195 perm/sec)   p_kst 7.707792e-04   p_cons 9.142656e-01   p_joint 3.485065e-03

Joint ci ratio: 5.324648e-02	ci left: 3.391718e-03	ci right 3.577887e-03	k: 5400	n:1550000
Cons ci ratio: 9.642523e-04	ci left: 9.138136e-01	ci right 9.146958e-01	k: 1417096	n:1550000
KS ci ratio: 1.134484e-01	ci left: 7.260048e-04	ci right 8.139423e-04	k: 1192	n:1550000
TPTE2   1550000 perm   1303 sec   (1189 perm/sec)   p_kst 7.690323e-04   p_cons 9.142555e-01   p_joint 3.483871e-03

Joint ci ratio: 5.305520e-02	ci left: 3.394644e-03	ci right 3.580283e-03	k: 5439	n:1560000
Cons ci ratio: 9.611314e-04	ci left: 9.138192e-01	ci right 9.146985e-01	k: 1426245	n:1560000
KS ci ratio: 1.129289e-01	ci left: 7.282027e-04	ci right 8.159755e-04	k: 1203	n:1560000
TPTE2   1560000 perm   1318 sec   (1184 perm/sec)   p_kst 7.711538e-04   p_cons 9.142596e-01   p_joint 3.486538e-03

Joint ci ratio: 5.283694e-02	ci left: 3.401306e-03	ci right 3.586521e-03	k: 5484	n:1570000
Cons ci ratio: 9.579978e-04	ci left: 9.138317e-01	ci right 9.147082e-01	k: 1435405	n:1570000
KS ci ratio: 1.124627e-01	ci left: 7.297543e-04	ci right 8.173271e-04	k: 1213	n:1570000
TPTE2   1570000 perm   1333 sec   (1178 perm/sec)   p_kst 7.726115e-04   p_cons 9.142707e-01   p_joint 3.492994e-03

Joint ci ratio: 5.263568e-02	ci left: 3.406010e-03	ci right 3.590754e-03	k: 5526	n:1580000
Cons ci ratio: 9.549641e-04	ci left: 9.138326e-01	ci right 9.147063e-01	k: 1444547	n:1580000
KS ci ratio: 1.120023e-01	ci left: 7.312871e-04	ci right 8.186608e-04	k: 1223	n:1580000
TPTE2   1580000 perm   1348 sec   (1172 perm/sec)   p_kst 7.740506e-04   p_cons 9.142703e-01   p_joint 3.497468e-03

Joint ci ratio: 5.248402e-02	ci left: 3.404450e-03	ci right 3.588561e-03	k: 5558	n:1590000
Cons ci ratio: 9.519323e-04	ci left: 9.138380e-01	ci right 9.147089e-01	k: 1453696	n:1590000
KS ci ratio: 1.116834e-01	ci left: 7.309672e-04	ci right 8.180376e-04	k: 1230	n:1590000
TPTE2   1590000 perm   1364 sec   (1166 perm/sec)   p_kst 7.735849e-04   p_cons 9.142742e-01   p_joint 3.495597e-03

Joint ci ratio: 5.233835e-02	ci left: 3.402293e-03	ci right 3.585761e-03	k: 5589	n:1600000
Cons ci ratio: 9.489178e-04	ci left: 9.138452e-01	ci right 9.147133e-01	k: 1462848	n:1600000
KS ci ratio: 1.115930e-01	ci left: 7.276137e-04	ci right 8.142098e-04	k: 1232	n:1600000
TPTE2   1600000 perm   1379 sec   (1160 perm/sec)   p_kst 7.700000e-04   p_cons 9.142800e-01   p_joint 3.493125e-03

Joint ci ratio: 5.217061e-02	ci left: 3.403229e-03	ci right 3.586142e-03	k: 5625	n:1610000
Cons ci ratio: 9.458005e-04	ci left: 9.138740e-01	ci right 9.147394e-01	k: 1472035	n:1610000
KS ci ratio: 1.111879e-01	ci left: 7.285287e-04	ci right 8.148984e-04	k: 1241	n:1610000
TPTE2   1610000 perm   1395 sec   (1154 perm/sec)   p_kst 7.708075e-04   p_cons 9.143075e-01   p_joint 3.493789e-03

Joint ci ratio: 5.204600e-02	ci left: 3.398671e-03	ci right 3.580889e-03	k: 5652	n:1620000
Cons ci ratio: 9.429737e-04	ci left: 9.138592e-01	ci right 9.147220e-01	k: 1481152	n:1620000
KS ci ratio: 1.109649e-01	ci left: 7.270322e-04	ci right 8.130403e-04	k: 1246	n:1620000
TPTE2   1620000 perm   1410 sec   (1149 perm/sec)   p_kst 7.691358e-04   p_cons 9.142914e-01   p_joint 3.488889e-03

Joint ci ratio: 5.192687e-02	ci left: 3.393564e-03	ci right 3.575079e-03	k: 5678	n:1630000
Cons ci ratio: 9.400138e-04	ci left: 9.138711e-01	ci right 9.147311e-01	k: 1490312	n:1630000
KS ci ratio: 1.106547e-01	ci left: 7.267473e-04	ci right 8.124658e-04	k: 1253	n:1630000
TPTE2   1630000 perm   1426 sec   (1143 perm/sec)   p_kst 7.687117e-04   p_cons 9.143018e-01   p_joint 3.483436e-03

Joint ci ratio: 5.173126e-02	ci left: 3.398751e-03	ci right 3.579838e-03	k: 5721	n:1640000
Cons ci ratio: 9.369503e-04	ci left: 9.139048e-01	ci right 9.147621e-01	k: 1499508	n:1640000
KS ci ratio: 1.102597e-01	ci left: 7.276522e-04	ci right 8.131511e-04	k: 1262	n:1640000
TPTE2   1640000 perm   1441 sec   (1138 perm/sec)   p_kst 7.695122e-04   p_cons 9.143341e-01   p_joint 3.488415e-03

Joint ci ratio: 5.158726e-02	ci left: 3.397296e-03	ci right 3.577787e-03	k: 5753	n:1650000
Cons ci ratio: 9.341007e-04	ci left: 9.139071e-01	ci right 9.147618e-01	k: 1508653	n:1650000
KS ci ratio: 1.099122e-01	ci left: 7.279571e-04	ci right 8.132048e-04	k: 1270	n:1650000
TPTE2   1650000 perm   1457 sec   (1133 perm/sec)   p_kst 7.696970e-04   p_cons 9.143352e-01   p_joint 3.486667e-03

Joint ci ratio: 5.147124e-02	ci left: 3.392291e-03	ci right 3.572099e-03	k: 5779	n:1660000
Cons ci ratio: 9.312412e-04	ci left: 9.139154e-01	ci right 9.147675e-01	k: 1517808	n:1660000
KS ci ratio: 1.096108e-01	ci left: 7.276730e-04	ci right 8.126386e-04	k: 1277	n:1660000
TPTE2   1660000 perm   1472 sec   (1127 perm/sec)   p_kst 7.692771e-04   p_cons 9.143422e-01   p_joint 3.481325e-03

Joint ci ratio: 5.126305e-02	ci left: 3.399760e-03	ci right 3.579214e-03	k: 5826	n:1670000
Cons ci ratio: 9.285959e-04	ci left: 9.138918e-01	ci right 9.147415e-01	k: 1526910	n:1670000
KS ci ratio: 1.090573e-01	ci left: 7.308873e-04	ci right 8.157696e-04	k: 1290	n:1670000
TPTE2   1670000 perm   1488 sec   (1122 perm/sec)   p_kst 7.724551e-04   p_cons 9.143174e-01   p_joint 3.488623e-03

Joint ci ratio: 5.112291e-02	ci left: 3.398328e-03	ci right 3.577200e-03	k: 5858	n:1680000
Cons ci ratio: 9.259095e-04	ci left: 9.138793e-01	ci right 9.147264e-01	k: 1536030	n:1680000
KS ci ratio: 1.088468e-01	ci left: 7.294318e-04	ci right 8.139711e-04	k: 1295	n:1680000
TPTE2   1680000 perm   1504 sec   (1117 perm/sec)   p_kst 7.708333e-04   p_cons 9.143036e-01   p_joint 3.486905e-03

Joint ci ratio: 5.091890e-02	ci left: 3.405675e-03	ci right 3.584198e-03	k: 5905	n:1690000
Cons ci ratio: 9.231941e-04	ci left: 9.138758e-01	ci right 9.147204e-01	k: 1545165	n:1690000
KS ci ratio: 1.082221e-01	ci left: 7.337505e-04	ci right 8.182712e-04	k: 1310	n:1690000
TPTE2   1690000 perm   1520 sec   (1112 perm/sec)   p_kst 7.751479e-04   p_cons 9.142988e-01   p_joint 3.494083e-03

Joint ci ratio: 5.078585e-02	ci left: 3.403645e-03	ci right 3.581582e-03	k: 5936	n:1700000
Cons ci ratio: 9.206371e-04	ci left: 9.138493e-01	ci right 9.146916e-01	k: 1554261	n:1700000
KS ci ratio: 1.078934e-01	ci left: 7.340130e-04	ci right 8.182909e-04	k: 1318	n:1700000
TPTE2   1700000 perm   1536 sec   (1107 perm/sec)   p_kst 7.752941e-04   p_cons 9.142712e-01   p_joint 3.491765e-03

Joint ci ratio: 5.061130e-02	ci left: 3.407414e-03	ci right 3.584918e-03	k: 5977	n:1710000
Cons ci ratio: 9.179711e-04	ci left: 9.138455e-01	ci right 9.146853e-01	k: 1563395	n:1710000
KS ci ratio: 1.075677e-01	ci left: 7.342729e-04	ci right 8.183099e-04	k: 1326	n:1710000
TPTE2   1710000 perm   1553 sec   (1101 perm/sec)   p_kst 7.754386e-04   p_cons 9.142661e-01   p_joint 3.495322e-03

Joint ci ratio: 5.043014e-02	ci left: 3.412288e-03	ci right 3.589391e-03	k: 6020	n:1720000
Cons ci ratio: 9.152160e-04	ci left: 9.138609e-01	ci right 9.146982e-01	k: 1572562	n:1720000
KS ci ratio: 1.071245e-01	ci left: 7.362275e-04	ci right 8.201192e-04	k: 1337	n:1720000
TPTE2   1720000 perm   1569 sec   (1096 perm/sec)   p_kst 7.773256e-04   p_cons 9.142802e-01   p_joint 3.500000e-03

Joint ci ratio: 5.031339e-02	ci left: 3.408544e-03	ci right 3.585032e-03	k: 6048	n:1730000
Cons ci ratio: 9.128053e-04	ci left: 9.138211e-01	ci right 9.146562e-01	k: 1581634	n:1730000
KS ci ratio: 1.068852e-01	ci left: 7.353473e-04	ci right 8.189397e-04	k: 1343	n:1730000
TPTE2   1730000 perm   1585 sec   (1091 perm/sec)   p_kst 7.763006e-04   p_cons 9.142393e-01   p_joint 3.495954e-03

Joint ci ratio: 5.013952e-02	ci left: 3.412790e-03	ci right 3.588869e-03	k: 6090	n:1740000
Cons ci ratio: 9.101265e-04	ci left: 9.138313e-01	ci right 9.146639e-01	k: 1590792	n:1740000
KS ci ratio: 1.066475e-01	ci left: 7.344773e-04	ci right 8.177735e-04	k: 1349	n:1740000
TPTE2   1740000 perm   1602 sec   (1086 perm/sec)   p_kst 7.752874e-04   p_cons 9.142483e-01   p_joint 3.500000e-03

Joint ci ratio: 4.995110e-02	ci left: 3.419245e-03	ci right 3.594975e-03	k: 6136	n:1750000
Cons ci ratio: 9.077191e-04	ci left: 9.137984e-01	ci right 9.146288e-01	k: 1599875	n:1750000
KS ci ratio: 1.062546e-01	ci left: 7.358425e-04	ci right 8.189668e-04	k: 1359	n:1750000
TPTE2   1750000 perm   1618 sec   (1081 perm/sec)   p_kst 7.765714e-04   p_cons 9.142143e-01   p_joint 3.506286e-03

Joint ci ratio: 4.983358e-02	ci left: 3.416090e-03	ci right 3.591232e-03	k: 6165	n:1760000
Cons ci ratio: 9.050388e-04	ci left: 9.138166e-01	ci right 9.146446e-01	k: 1609047	n:1760000
KS ci ratio: 1.060210e-01	ci left: 7.349801e-04	ci right 8.178132e-04	k: 1365	n:1760000
TPTE2   1760000 perm   1635 sec   (1077 perm/sec)   p_kst 7.755682e-04   p_cons 9.142313e-01   p_joint 3.502841e-03

Joint ci ratio: 4.968873e-02	ci left: 3.416876e-03	ci right 3.591535e-03	k: 6201	n:1770000
Cons ci ratio: 9.024373e-04	ci left: 9.138249e-01	ci right 9.146505e-01	k: 1618202	n:1770000
KS ci ratio: 1.055199e-01	ci left: 7.379781e-04	ci right 8.207316e-04	k: 1378	n:1770000
TPTE2   1770000 perm   1652 sec   (1072 perm/sec)   p_kst 7.785311e-04   p_cons 9.142384e-01   p_joint 3.503390e-03

Joint ci ratio: 4.955310e-02	ci left: 3.416544e-03	ci right 3.590696e-03	k: 6235	n:1780000
Cons ci ratio: 8.999193e-04	ci left: 9.138225e-01	ci right 9.146458e-01	k: 1627338	n:1780000
KS ci ratio: 1.052912e-01	ci left: 7.371141e-04	ci right 8.195803e-04	k: 1384	n:1780000
TPTE2   1780000 perm   1668 sec   (1067 perm/sec)   p_kst 7.775281e-04   p_cons 9.142348e-01   p_joint 3.502809e-03

Joint ci ratio: 4.941067e-02	ci left: 3.417320e-03	ci right 3.590997e-03	k: 6271	n:1790000
Cons ci ratio: 8.973424e-04	ci left: 9.138341e-01	ci right 9.146550e-01	k: 1636499	n:1790000
KS ci ratio: 1.049507e-01	ci left: 7.378919e-04	ci right 8.201617e-04	k: 1393	n:1790000
TPTE2   1790000 perm   1685 sec   (1062 perm/sec)   p_kst 7.782123e-04   p_cons 9.142453e-01   p_joint 3.503352e-03

Joint ci ratio: 4.922250e-02	ci left: 3.424673e-03	ci right 3.598042e-03	k: 6319	n:1800000
Cons ci ratio: 8.948224e-04	ci left: 9.138395e-01	ci right 9.146581e-01	k: 1645649	n:1800000
KS ci ratio: 1.047256e-01	ci left: 7.370384e-04	ci right 8.190260e-04	k: 1399	n:1800000
TPTE2   1800000 perm   1702 sec   (1057 perm/sec)   p_kst 7.772222e-04   p_cons 9.142494e-01   p_joint 3.510556e-03

Joint ci ratio: 4.911780e-02	ci left: 3.420486e-03	ci right 3.593264e-03	k: 6346	n:1810000
Cons ci ratio: 8.923769e-04	ci left: 9.138353e-01	ci right 9.146517e-01	k: 1654782	n:1810000
KS ci ratio: 1.045764e-01	ci left: 7.351184e-04	ci right 8.167688e-04	k: 1403	n:1810000
TPTE2   1810000 perm   1719 sec   (1053 perm/sec)   p_kst 7.751381e-04   p_cons 9.142442e-01   p_joint 3.506077e-03

Joint ci ratio: 4.897523e-02	ci left: 3.421772e-03	ci right 3.594099e-03	k: 6383	n:1820000
Cons ci ratio: 8.900387e-04	ci left: 9.138159e-01	ci right 9.146301e-01	k: 1663887	n:1820000
KS ci ratio: 1.043167e-01	ci left: 7.348250e-04	ci right 8.162277e-04	k: 1410	n:1820000
TPTE2   1820000 perm   1737 sec   (1048 perm/sec)   p_kst 7.747253e-04   p_cons 9.142236e-01   p_joint 3.507143e-03

Joint ci ratio: 4.881483e-02	ci left: 3.425744e-03	ci right 3.597691e-03	k: 6425	n:1830000
Cons ci ratio: 8.876538e-04	ci left: 9.138081e-01	ci right 9.146201e-01	k: 1673013	n:1830000
KS ci ratio: 1.039490e-01	ci left: 7.361317e-04	ci right 8.173741e-04	k: 1420	n:1830000
TPTE2   1830000 perm   1753 sec   (1044 perm/sec)   p_kst 7.759563e-04   p_cons 9.142148e-01   p_joint 3.510929e-03

Joint ci ratio: 4.867487e-02	ci left: 3.426990e-03	ci right 3.598492e-03	k: 6462	n:1840000
Cons ci ratio: 8.851898e-04	ci left: 9.138178e-01	ci right 9.146276e-01	k: 1682171	n:1840000
KS ci ratio: 1.036939e-01	ci left: 7.358366e-04	ci right 8.168350e-04	k: 1427	n:1840000
TPTE2   1840000 perm   1771 sec   (1039 perm/sec)   p_kst 7.755435e-04   p_cons 9.142234e-01   p_joint 3.511957e-03

Joint ci ratio: 4.853237e-02	ci left: 3.428757e-03	ci right 3.599830e-03	k: 6500	n:1850000
Cons ci ratio: 8.827370e-04	ci left: 9.138291e-01	ci right 9.146366e-01	k: 1691332	n:1850000
KS ci ratio: 1.034047e-01	ci left: 7.360714e-04	ci right 8.168559e-04	k: 1435	n:1850000
TPTE2   1850000 perm   1788 sec   (1035 perm/sec)   p_kst 7.756757e-04   p_cons 9.142335e-01   p_joint 3.513514e-03

Joint ci ratio: 4.838739e-02	ci left: 3.431036e-03	ci right 3.601698e-03	k: 6539	n:1860000
Cons ci ratio: 8.804162e-04	ci left: 9.138203e-01	ci right 9.146257e-01	k: 1700456	n:1860000
KS ci ratio: 1.030108e-01	ci left: 7.378754e-04	ci right 8.185308e-04	k: 1446	n:1860000
TPTE2   1860000 perm   1806 sec   (1030 perm/sec)   p_kst 7.774194e-04   p_cons 9.142237e-01   p_joint 3.515591e-03

Joint ci ratio: 4.825107e-02	ci left: 3.432236e-03	ci right 3.602463e-03	k: 6576	n:1870000
Cons ci ratio: 8.781345e-04	ci left: 9.138079e-01	ci right 9.146112e-01	k: 1709573	n:1870000
KS ci ratio: 1.027979e-01	ci left: 7.370555e-04	ci right 8.174447e-04	k: 1452	n:1870000
TPTE2   1870000 perm   1823 sec   (1026 perm/sec)   p_kst 7.764706e-04   p_cons 9.142102e-01   p_joint 3.516578e-03

Joint ci ratio: 4.814512e-02	ci left: 3.429218e-03	ci right 3.598912e-03	k: 6605	n:1880000
Cons ci ratio: 8.758170e-04	ci left: 9.138051e-01	ci right 9.146063e-01	k: 1718708	n:1880000
KS ci ratio: 1.026921e-01	ci left: 7.346897e-04	ci right 8.147334e-04	k: 1455	n:1880000
TPTE2   1880000 perm   1841 sec   (1021 perm/sec)   p_kst 7.739362e-04   p_cons 9.142064e-01   p_joint 3.513298e-03

Joint ci ratio: 4.801083e-02	ci left: 3.430416e-03	ci right 3.599682e-03	k: 6642	n:1890000
Cons ci ratio: 8.735325e-04	ci left: 9.137998e-01	ci right 9.145989e-01	k: 1727838	n:1890000
KS ci ratio: 1.024461e-01	ci left: 7.344111e-04	ci right 8.142213e-04	k: 1462	n:1890000
TPTE2   1890000 perm   1859 sec   (1017 perm/sec)   p_kst 7.735450e-04   p_cons 9.142000e-01   p_joint 3.514286e-03

Joint ci ratio: 4.787407e-02	ci left: 3.432121e-03	ci right 3.600976e-03	k: 6680	n:1900000
Cons ci ratio: 8.712599e-04	ci left: 9.137956e-01	ci right 9.145926e-01	k: 1736970	n:1900000
KS ci ratio: 1.020977e-01	ci left: 7.356744e-04	ci right 8.153337e-04	k: 1472	n:1900000
TPTE2   1900000 perm   1877 sec   (1012 perm/sec)   p_kst 7.747368e-04   p_cons 9.141947e-01   p_joint 3.515789e-03

Joint ci ratio: 4.770641e-02	ci left: 3.438466e-03	ci right 3.607024e-03	k: 6727	n:1910000
Cons ci ratio: 8.689818e-04	ci left: 9.137956e-01	ci right 9.145906e-01	k: 1746110	n:1910000
KS ci ratio: 1.017872e-01	ci left: 7.364146e-04	ci right 8.158970e-04	k: 1481	n:1910000
TPTE2   1910000 perm   1895 sec   (1008 perm/sec)   p_kst 7.753927e-04   p_cons 9.141937e-01   p_joint 3.521990e-03

Joint ci ratio: 4.760400e-02	ci left: 3.435481e-03	ci right 3.603522e-03	k: 6756	n:1920000
Cons ci ratio: 8.667675e-04	ci left: 9.137873e-01	ci right 9.145802e-01	k: 1755234	n:1920000
KS ci ratio: 1.015136e-01	ci left: 7.366398e-04	ci right 8.159201e-04	k: 1489	n:1920000
TPTE2   1920000 perm   1913 sec   (1004 perm/sec)   p_kst 7.755208e-04   p_cons 9.141844e-01   p_joint 3.518750e-03

Joint ci ratio: 4.746716e-02	ci left: 3.437648e-03	ci right 3.605298e-03	k: 6795	n:1930000
Cons ci ratio: 8.645100e-04	ci left: 9.137900e-01	ci right 9.145808e-01	k: 1764379	n:1930000
KS ci ratio: 1.012760e-01	ci left: 7.363580e-04	ci right 8.154114e-04	k: 1496	n:1930000
TPTE2   1930000 perm   1931 sec   (999 perm/sec)   p_kst 7.751295e-04   p_cons 9.141860e-01   p_joint 3.520725e-03

Joint ci ratio: 4.732803e-02	ci left: 3.440302e-03	ci right 3.607577e-03	k: 6835	n:1940000
Cons ci ratio: 8.623013e-04	ci left: 9.137869e-01	ci right 9.145757e-01	k: 1773513	n:1940000
KS ci ratio: 1.008056e-01	ci left: 7.395965e-04	ci right 8.186070e-04	k: 1510	n:1940000
TPTE2   1940000 perm   1950 sec   (995 perm/sec)   p_kst 7.783505e-04   p_cons 9.141820e-01   p_joint 3.523196e-03

Joint ci ratio: 4.722458e-02	ci left: 3.437862e-03	ci right 3.604643e-03	k: 6865	n:1950000
Cons ci ratio: 8.601515e-04	ci left: 9.137762e-01	ci right 9.145631e-01	k: 1782632	n:1950000
KS ci ratio: 1.006061e-01	ci left: 7.388032e-04	ci right 8.175634e-04	k: 1516	n:1950000
TPTE2   1950000 perm   1968 sec   (991 perm/sec)   p_kst 7.774359e-04   p_cons 9.141703e-01   p_joint 3.520513e-03

Joint ci ratio: 4.710468e-02	ci left: 3.437969e-03	ci right 3.604320e-03	k: 6900	n:1960000
Cons ci ratio: 8.579676e-04	ci left: 9.137748e-01	ci right 9.145597e-01	k: 1791769	n:1960000
KS ci ratio: 1.003089e-01	ci left: 7.395102e-04	ci right 8.180993e-04	k: 1525	n:1960000
TPTE2   1960000 perm   1987 sec   (986 perm/sec)   p_kst 7.780612e-04   p_cons 9.141679e-01   p_joint 3.520408e-03

Joint ci ratio: 4.700609e-02	ci left: 3.435065e-03	ci right 3.600918e-03	k: 6929	n:1970000
Cons ci ratio: 8.557614e-04	ci left: 9.137806e-01	ci right 9.145634e-01	k: 1800920	n:1970000
KS ci ratio: 1.002434e-01	ci left: 7.367461e-04	ci right 8.149873e-04	k: 1527	n:1970000
TPTE2   1970000 perm   2006 sec   (982 perm/sec)   p_kst 7.751269e-04   p_cons 9.141726e-01   p_joint 3.517259e-03

Joint ci ratio: 4.692165e-02	ci left: 3.430194e-03	ci right 3.595506e-03	k: 6954	n:1980000
Cons ci ratio: 8.535667e-04	ci left: 9.137873e-01	ci right 9.145681e-01	k: 1810073	n:1980000
KS ci ratio: 1.000146e-01	ci left: 7.364720e-04	ci right 8.144951e-04	k: 1534	n:1980000
TPTE2   1980000 perm   2025 sec   (978 perm/sec)   p_kst 7.747475e-04   p_cons 9.141783e-01   p_joint 3.512121e-03

Joint ci ratio: 4.680403e-02	ci left: 3.430339e-03	ci right 3.595232e-03	k: 6989	n:1990000
Cons ci ratio: 8.513806e-04	ci left: 9.137954e-01	ci right 9.145742e-01	k: 1819229	n:1990000
KS ci ratio: 9.969034e-02	ci left: 7.376708e-04	ci right 8.155527e-04	k: 1544	n:1990000
TPTE2   1990000 perm   2043 sec   (974 perm/sec)   p_kst 7.758794e-04   p_cons 9.141854e-01   p_joint 3.512060e-03

Outputting figure to mutsig2_images.part000000000180/TPTE2.2_1649_1990000_0.00077588_0.91419_0.0035121.png
                gene_name: TPTE2
               theta_stop: 0.100 
                    nperm: 1990000 
                     p_ks: 0.00078 
        ci_ks_bounds_left: 0.00074 
       ci_ks_bounds_right: 0.00082 
                   p_cons: 0.91 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.91 
                  p_joint: 0.0035 
     ci_joint_bounds_left: 0.0034 
    ci_joint_bounds_right: 0.0036 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000180
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 180 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1545>
Subject: Job 8704398: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1545>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000181> was used as the working directory.
Started at Thu Nov 15 19:37:24 2012
Results reported at Thu Nov 15 19:42:42 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000181.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000181.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 181  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000181.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    416.93 sec.
    Max Memory :      5922 MB
    Max Swap   :      8505 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
181
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 181
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 181: processing genes 16285 - 16374
Calculating significance of each gene.
Using projection method.
16285	TRABD	1
16286	TRADD	1
16287	TRAF1	6.231595e-02
16288	TRAF2	1
16289	TRAF3	1
16290	TRAF3IP1	1
16291	TRAF3IP2	1
16292	TRAF3IP3	1.460018e-01
In gene TRAF4 the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 1440    n = 1	mu =   2.35e-07
16293	TRAF4	1.739961e-01
16294	TRAF5	1
16295	TRAF6	1
16296	TRAF7	1
16297	TRAFD1	6.407782e-02
16298	TRAIP	1
16299	TRAK1	1
16300	TRAK2	1
16301	TRAM1	1
16302	TRAM1L1	1
16303	TRAM2	1
16304	TRANK1	1.164899e-01
16305	TRAP1	1
16306	TRAPPC1	1
16307	TRAPPC10	3.576415e-01
16308	TRAPPC2	1
16309	TRAPPC2L	1
16310	TRAPPC3	1
16311	TRAPPC4	1
16312	TRAPPC5	1.401868e-02
16313	TRAPPC6A	6.711756e-03
16314	TRAPPC6B	1
16315	TRAPPC9	1
16316	TRAT1	1
16317	TRDMT1	1
16318	TRDN	1
16319	TREH	1
16320	TREM1	1
16321	TREM2	1
16322	TREML1	1
16323	TREML2	1
16324	TREML4	1
16325	TRERF1	1
16326	TREX1	5.238087e-02
16327	TREX2	1
16328	TRH	1
16329	TRHDE	2.132639e-01
16330	TRHR	1
16331	TRIAP1	1
16332	TRIB1	1
16333	TRIB2	1
16334	TRIB3	7.290178e-02
16335	TRIL	1
16336	TRIM10	1
16337	TRIM11	1
16338	TRIM13	2.630273e-02
16339	TRIM14	1
16340	TRIM15	1
16341	TRIM16	1
16342	TRIM16L	1
16343	TRIM17	1
16344	TRIM2	1
16345	TRIM21	1
16346	TRIM22	1
16347	TRIM23	1
16348	TRIM24	1
16349	TRIM25	1
In gene TRIM26 the following bins exceed PROBCAP:
    THCA-FY-A3I4-TP	categ 6	N = 1428    n = 1	mu =   1.02e-07
16350	TRIM26	7.430187e-02
16351	TRIM27	1
16352	TRIM28	6.478115e-02
16353	TRIM29	1
16354	TRIM3	1
16355	TRIM31	1
16356	TRIM32	1
16357	TRIM33	2.473260e-01
16358	TRIM34	1
16359	TRIM35	1
16360	TRIM36	9.236911e-02
16361	TRIM37	1
16362	TRIM38	1
16363	TRIM39	1.056508e-01
16364	TRIM4	1
16365	TRIM40	1
16366	TRIM41	1
16367	TRIM42	1
16368	TRIM43	3.024387e-02
16369	TRIM44	1
16370	TRIM45	1
16371	TRIM46	5.008922e-02
16372	TRIM47	1
16373	TRIM48	2.872164e-03
16374	TRIM49	1
Done

Running MutSig 2:
Scatter job 181: processing genes 16285 - 16374
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TRANK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.548179e-02	ci left: 5.397853e-01	ci right 5.593858e-01	k: 5496	n:10000
Cons ci ratio: 1.394590e-02	ci left: 8.813485e-01	ci right 8.938247e-01	k: 8877	n:10000
KS ci ratio: 7.607495e-02	ci left: 2.017565e-01	ci right 2.178129e-01	k: 2097	n:10000
TRANK1   10000 perm   3 sec   (2987 perm/sec)   p_kst 2.097000e-01   p_cons 8.877000e-01   p_joint 5.496000e-01

Outputting figure to mutsig2_images.part000000000181/TRANK1.2_8870_10000_0.2097_0.8877_0.5496.png
                gene_name: TRANK1
               theta_stop: 0.076 
                    nperm: 10000 
                     p_ks: 0.21 
        ci_ks_bounds_left: 0.20 
       ci_ks_bounds_right: 0.22 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.55 
     ci_joint_bounds_left: 0.54 
    ci_joint_bounds_right: 0.56 

Current progress: 33 percent done.
TRIM46
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.370007e-02	ci left: 8.849326e-01	ci right 8.972385e-01	k: 8912	n:10000
Cons ci ratio: 3.070545e-02	ci left: 6.101014e-01	ci right 6.292288e-01	k: 6197	n:10000
KS ci ratio: 2.251712e-02	ci left: 7.433121e-01	ci right 7.603410e-01	k: 7519	n:10000
TRIM46   10000 perm   2 sec   (6059 perm/sec)   p_kst 7.519000e-01   p_cons 6.197000e-01   p_joint 8.912000e-01

Outputting figure to mutsig2_images.part000000000181/TRIM46.2_2320_10000_0.7519_0.6197_0.8912.png
                gene_name: TRIM46
               theta_stop: 0.031 
                    nperm: 10000 
                     p_ks: 0.75 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.76 
                   p_cons: 0.62 
      ci_cons_bounds_left: 0.61 
     ci_cons_bounds_right: 0.63 
                  p_joint: 0.89 
     ci_joint_bounds_left: 0.88 
    ci_joint_bounds_right: 0.90 

Current progress: 67 percent done.
TRIM48
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.071161e-01	ci left: 1.117389e-01	ci right 1.244845e-01	k: 1180	n:10000
Cons ci ratio: 3.005121e-02	ci left: 6.202494e-01	ci right 6.392749e-01	k: 6298	n:10000
KS ci ratio: 6.264461e-01	ci left: 2.690467e-03	ci right 5.212103e-03	k: 38	n:10000
TRIM48   10000 perm   1 sec   (7364 perm/sec)   p_kst 3.800000e-03   p_cons 6.298000e-01   p_joint 1.180000e-01

Joint ci ratio: 4.987901e-02	ci left: 2.300297e-01	ci right 2.418471e-01	k: 4718	n:20000
Cons ci ratio: 2.135991e-02	ci left: 6.206561e-01	ci right 6.341069e-01	k: 12548	n:20000
KS ci ratio: 4.429753e-01	ci left: 3.039518e-03	ci right 4.809524e-03	k: 77	n:20000
TRIM48   20000 perm   3 sec   (6310 perm/sec)   p_kst 3.850000e-03   p_cons 6.274000e-01   p_joint 2.359000e-01

Joint ci ratio: 4.090582e-02	ci left: 2.295494e-01	ci right 2.391688e-01	k: 7030	n:30000
Cons ci ratio: 1.736109e-02	ci left: 6.240396e-01	ci right 6.350020e-01	k: 18886	n:30000
KS ci ratio: 3.512923e-01	ci left: 3.408625e-03	ci right 4.889942e-03	k: 123	n:30000
TRIM48   30000 perm   5 sec   (5931 perm/sec)   p_kst 4.100000e-03   p_cons 6.295333e-01   p_joint 2.343333e-01

Joint ci ratio: 3.518701e-02	ci left: 2.326158e-01	ci right 2.409725e-01	k: 9471	n:40000
Cons ci ratio: 1.506617e-02	ci left: 6.238182e-01	ci right 6.333132e-01	k: 25143	n:40000
KS ci ratio: 3.036153e-01	ci left: 3.520621e-03	ci right 4.803011e-03	k: 165	n:40000
TRIM48   40000 perm   7 sec   (5703 perm/sec)   p_kst 4.125000e-03   p_cons 6.285750e-01   p_joint 2.367750e-01

Joint ci ratio: 3.192465e-02	ci left: 2.279677e-01	ci right 2.353835e-01	k: 11583	n:50000
Cons ci ratio: 1.347320e-02	ci left: 6.244076e-01	ci right 6.328975e-01	k: 31433	n:50000
KS ci ratio: 2.787349e-01	ci left: 3.391256e-03	ci right 4.507551e-03	k: 196	n:50000
TRIM48   50000 perm   9 sec   (5527 perm/sec)   p_kst 3.920000e-03   p_cons 6.286600e-01   p_joint 2.316600e-01

Joint ci ratio: 2.880983e-02	ci left: 2.323913e-01	ci right 2.392009e-01	k: 14147	n:60000
Cons ci ratio: 1.230311e-02	ci left: 6.246358e-01	ci right 6.323851e-01	k: 37711	n:60000
KS ci ratio: 2.519997e-01	ci left: 3.510737e-03	ci right 4.538152e-03	k: 240	n:60000
TRIM48   60000 perm   11 sec   (5361 perm/sec)   p_kst 4.000000e-03   p_cons 6.285167e-01   p_joint 2.357833e-01

Joint ci ratio: 2.676504e-02	ci left: 2.314079e-01	ci right 2.376998e-01	k: 16418	n:70000
Cons ci ratio: 1.141460e-02	ci left: 6.239347e-01	ci right 6.311118e-01	k: 43927	n:70000
KS ci ratio: 2.325467e-01	ci left: 3.572844e-03	ci right 4.526133e-03	k: 282	n:70000
TRIM48   70000 perm   13 sec   (5222 perm/sec)   p_kst 4.028571e-03   p_cons 6.275286e-01   p_joint 2.345429e-01

Joint ci ratio: 2.549064e-02	ci left: 2.252457e-01	ci right 2.310740e-01	k: 18252	n:80000
Cons ci ratio: 1.068491e-02	ci left: 6.238384e-01	ci right 6.305524e-01	k: 50176	n:80000
KS ci ratio: 2.186946e-01	ci left: 3.562618e-03	ci right 4.448948e-03	k: 319	n:80000
TRIM48   80000 perm   16 sec   (5087 perm/sec)   p_kst 3.987500e-03   p_cons 6.272000e-01   p_joint 2.281500e-01

Joint ci ratio: 2.374651e-02	ci left: 2.296437e-01	ci right 2.351735e-01	k: 20916	n:90000
Cons ci ratio: 1.006188e-02	ci left: 6.245877e-01	ci right 6.309151e-01	k: 56498	n:90000
KS ci ratio: 2.044835e-01	ci left: 3.650842e-03	ci right 4.492729e-03	k: 365	n:90000
TRIM48   90000 perm   18 sec   (4960 perm/sec)   p_kst 4.055556e-03   p_cons 6.277556e-01   p_joint 2.324000e-01

Joint ci ratio: 2.255264e-02	ci left: 2.293966e-01	ci right 2.346390e-01	k: 23201	n:100000
Cons ci ratio: 9.552605e-03	ci left: 6.244047e-01	ci right 6.304079e-01	k: 62741	n:100000
KS ci ratio: 1.968457e-01	ci left: 3.561173e-03	ci right 4.348029e-03	k: 394	n:100000
TRIM48   100000 perm   21 sec   (4851 perm/sec)   p_kst 3.940000e-03   p_cons 6.274100e-01   p_joint 2.320100e-01

Joint ci ratio: 2.152958e-02	ci left: 2.290824e-01	ci right 2.340772e-01	k: 25473	n:110000
Cons ci ratio: 9.108254e-03	ci left: 6.245349e-01	ci right 6.302584e-01	k: 69014	n:110000
KS ci ratio: 1.884486e-01	ci left: 3.548921e-03	ci right 4.295791e-03	k: 430	n:110000
TRIM48   110000 perm   23 sec   (4750 perm/sec)   p_kst 3.909091e-03   p_cons 6.274000e-01   p_joint 2.315727e-01

Joint ci ratio: 2.061774e-02	ci left: 2.291076e-01	ci right 2.338887e-01	k: 27779	n:120000
Cons ci ratio: 8.717076e-03	ci left: 6.248408e-01	ci right 6.303197e-01	k: 75310	n:120000
KS ci ratio: 1.806540e-01	ci left: 3.555220e-03	ci right 4.269083e-03	k: 468	n:120000
TRIM48   120000 perm   26 sec   (4649 perm/sec)   p_kst 3.900000e-03   p_cons 6.275833e-01   p_joint 2.314917e-01

Joint ci ratio: 1.981275e-02	ci left: 2.291327e-01	ci right 2.337255e-01	k: 30085	n:130000
Cons ci ratio: 8.372873e-03	ci left: 6.250732e-01	ci right 6.303365e-01	k: 81602	n:130000
KS ci ratio: 1.732390e-01	ci left: 3.583166e-03	ci right 4.270022e-03	k: 509	n:130000
TRIM48   130000 perm   29 sec   (4555 perm/sec)   p_kst 3.915385e-03   p_cons 6.277077e-01   p_joint 2.314231e-01

Joint ci ratio: 1.908948e-02	ci left: 2.292641e-01	ci right 2.336899e-01	k: 32406	n:140000
Cons ci ratio: 8.075099e-03	ci left: 6.247753e-01	ci right 6.298480e-01	k: 87824	n:140000
KS ci ratio: 1.653180e-01	ci left: 3.669257e-03	ci right 4.337258e-03	k: 559	n:140000
TRIM48   140000 perm   31 sec   (4464 perm/sec)   p_kst 3.992857e-03   p_cons 6.273143e-01   p_joint 2.314714e-01

Joint ci ratio: 1.844765e-02	ci left: 2.292345e-01	ci right 2.335093e-01	k: 34705	n:150000
Cons ci ratio: 7.795635e-03	ci left: 6.252011e-01	ci right 6.301006e-01	k: 94148	n:150000
KS ci ratio: 1.597124e-01	ci left: 3.680465e-03	ci right 4.325607e-03	k: 599	n:150000
TRIM48   150000 perm   34 sec   (4369 perm/sec)   p_kst 3.993333e-03   p_cons 6.276533e-01   p_joint 2.313667e-01

Joint ci ratio: 1.785738e-02	ci left: 2.293914e-01	ci right 2.335308e-01	k: 37033	n:160000
Cons ci ratio: 7.539067e-03	ci left: 6.258390e-01	ci right 6.305813e-01	k: 100514	n:160000
KS ci ratio: 1.541580e-01	ci left: 3.714643e-03	ci right 4.341039e-03	k: 643	n:160000
TRIM48   160000 perm   37 sec   (4277 perm/sec)   p_kst 4.018750e-03   p_cons 6.282125e-01   p_joint 2.314563e-01

Joint ci ratio: 1.731866e-02	ci left: 2.295670e-01	ci right 2.335833e-01	k: 39367	n:170000
Cons ci ratio: 7.311865e-03	ci left: 6.260448e-01	ci right 6.306450e-01	k: 106819	n:170000
KS ci ratio: 1.496926e-01	ci left: 3.716826e-03	ci right 4.323810e-03	k: 682	n:170000
TRIM48   170000 perm   41 sec   (4196 perm/sec)   p_kst 4.011765e-03   p_cons 6.283471e-01   p_joint 2.315706e-01

Joint ci ratio: 1.683932e-02	ci left: 2.294422e-01	ci right 2.333442e-01	k: 41650	n:180000
Cons ci ratio: 7.107588e-03	ci left: 6.259959e-01	ci right 6.304666e-01	k: 113082	n:180000
KS ci ratio: 1.462052e-01	ci left: 3.686879e-03	ci right 4.273719e-03	k: 715	n:180000
TRIM48   180000 perm   44 sec   (4125 perm/sec)   p_kst 3.972222e-03   p_cons 6.282333e-01   p_joint 2.313889e-01

Joint ci ratio: 1.637928e-02	ci left: 2.297309e-01	ci right 2.335300e-01	k: 44009	n:190000
Cons ci ratio: 6.908072e-03	ci left: 6.267284e-01	ci right 6.310781e-01	k: 119492	n:190000
KS ci ratio: 1.421903e-01	ci left: 3.700839e-03	ci right 4.272353e-03	k: 756	n:190000
TRIM48   190000 perm   47 sec   (4056 perm/sec)   p_kst 3.978947e-03   p_cons 6.289053e-01   p_joint 2.316263e-01

Joint ci ratio: 1.595834e-02	ci left: 2.299171e-01	ci right 2.336207e-01	k: 46353	n:200000
Cons ci ratio: 6.731936e-03	ci left: 6.268685e-01	ci right 6.311077e-01	k: 125798	n:200000
KS ci ratio: 1.377115e-01	ci left: 3.757052e-03	ci right 4.317473e-03	k: 806	n:200000
TRIM48   200000 perm   50 sec   (3985 perm/sec)   p_kst 4.030000e-03   p_cons 6.289900e-01   p_joint 2.317650e-01

Joint ci ratio: 1.559328e-02	ci left: 2.295169e-01	ci right 2.331286e-01	k: 48577	n:210000
Cons ci ratio: 6.569557e-03	ci left: 6.269298e-01	ci right 6.310667e-01	k: 132090	n:210000
KS ci ratio: 1.339451e-01	ci left: 3.789754e-03	ci right 4.338360e-03	k: 852	n:210000
TRIM48   210000 perm   54 sec   (3912 perm/sec)   p_kst 4.057143e-03   p_cons 6.290000e-01   p_joint 2.313190e-01

Joint ci ratio: 1.522586e-02	ci left: 2.297660e-01	ci right 2.332957e-01	k: 50936	n:220000
Cons ci ratio: 6.415889e-03	ci left: 6.271686e-01	ci right 6.312098e-01	k: 138422	n:220000
KS ci ratio: 1.306908e-01	ci left: 3.806479e-03	ci right 4.343080e-03	k: 895	n:220000
TRIM48   220000 perm   57 sec   (3850 perm/sec)   p_kst 4.068182e-03   p_cons 6.291909e-01   p_joint 2.315273e-01

Joint ci ratio: 1.499073e-02	ci left: 2.274488e-01	ci right 2.308885e-01	k: 52708	n:230000
Cons ci ratio: 6.275385e-03	ci left: 6.271743e-01	ci right 6.311268e-01	k: 144705	n:230000
KS ci ratio: 1.275264e-01	ci left: 3.830316e-03	ci right 4.356215e-03	k: 940	n:230000
TRIM48   230000 perm   61 sec   (3786 perm/sec)   p_kst 4.086957e-03   p_cons 6.291522e-01   p_joint 2.291652e-01

Joint ci ratio: 1.466553e-02	ci left: 2.277149e-01	ci right 2.310833e-01	k: 55055	n:240000
Cons ci ratio: 6.142409e-03	ci left: 6.272806e-01	ci right 6.311496e-01	k: 151012	n:240000
KS ci ratio: 1.246448e-01	ci left: 3.848273e-03	ci right 4.363816e-03	k: 984	n:240000
TRIM48   240000 perm   64 sec   (3724 perm/sec)   p_kst 4.100000e-03   p_cons 6.292167e-01   p_joint 2.293958e-01

Joint ci ratio: 1.475551e-02	ci left: 2.185290e-01	ci right 2.217815e-01	k: 55038	n:250000
Cons ci ratio: 6.018833e-03	ci left: 6.272791e-01	ci right 6.310699e-01	k: 157294	n:250000
KS ci ratio: 1.224891e-01	ci left: 3.830012e-03	ci right 4.333592e-03	k: 1019	n:250000
TRIM48   250000 perm   68 sec   (3668 perm/sec)   p_kst 4.076000e-03   p_cons 6.291760e-01   p_joint 2.201520e-01

Joint ci ratio: 1.447409e-02	ci left: 2.184396e-01	ci right 2.216282e-01	k: 57208	n:260000
Cons ci ratio: 5.901697e-03	ci left: 6.273362e-01	ci right 6.310533e-01	k: 163591	n:260000
KS ci ratio: 1.207291e-01	ci left: 3.794575e-03	ci right 4.285813e-03	k: 1049	n:260000
TRIM48   260000 perm   72 sec   (3609 perm/sec)   p_kst 4.034615e-03   p_cons 6.291962e-01   p_joint 2.200308e-01

Joint ci ratio: 1.405519e-02	ci left: 2.220849e-01	ci right 2.252321e-01	k: 60387	n:270000
Cons ci ratio: 5.791144e-03	ci left: 6.273897e-01	ci right 6.310372e-01	k: 169888	n:270000
KS ci ratio: 1.183299e-01	ci left: 3.808534e-03	ci right 4.291096e-03	k: 1092	n:270000
TRIM48   270000 perm   76 sec   (3553 perm/sec)   p_kst 4.044444e-03   p_cons 6.292148e-01   p_joint 2.236556e-01

Joint ci ratio: 1.379874e-02	ci left: 2.221932e-01	ci right 2.252840e-01	k: 62646	n:280000
Cons ci ratio: 5.685231e-03	ci left: 6.275508e-01	ci right 6.311322e-01	k: 176216	n:280000
KS ci ratio: 1.166366e-01	ci left: 3.783439e-03	ci right 4.255489e-03	k: 1124	n:280000
TRIM48   280000 perm   80 sec   (3497 perm/sec)   p_kst 4.014286e-03   p_cons 6.293429e-01   p_joint 2.237357e-01

Joint ci ratio: 1.355046e-02	ci left: 2.224320e-01	ci right 2.254700e-01	k: 64945	n:290000
Cons ci ratio: 5.584552e-03	ci left: 6.277324e-01	ci right 6.312512e-01	k: 182553	n:290000
KS ci ratio: 1.146662e-01	ci left: 3.783568e-03	ci right 4.247120e-03	k: 1163	n:290000
TRIM48   290000 perm   84 sec   (3443 perm/sec)   p_kst 4.010345e-03   p_cons 6.294931e-01   p_joint 2.239483e-01

Joint ci ratio: 1.312629e-02	ci left: 2.276503e-01	ci right 2.306616e-01	k: 68746	n:300000
Cons ci ratio: 5.490371e-03	ci left: 6.277890e-01	ci right 6.312485e-01	k: 188856	n:300000
KS ci ratio: 1.124644e-01	ci left: 3.806430e-03	ci right 4.263233e-03	k: 1209	n:300000
TRIM48   300000 perm   88 sec   (3393 perm/sec)   p_kst 4.030000e-03   p_cons 6.295200e-01   p_joint 2.291533e-01

Joint ci ratio: 1.295585e-02	ci left: 2.265048e-01	ci right 2.294616e-01	k: 70674	n:310000
Cons ci ratio: 5.398335e-03	ci left: 6.280554e-01	ci right 6.314583e-01	k: 195225	n:310000
KS ci ratio: 1.102526e-01	ci left: 3.837307e-03	ci right 4.288171e-03	k: 1258	n:310000
TRIM48   310000 perm   93 sec   (3342 perm/sec)   p_kst 4.058065e-03   p_cons 6.297581e-01   p_joint 2.279806e-01

Joint ci ratio: 1.261523e-02	ci left: 2.303326e-01	ci right 2.332598e-01	k: 74174	n:320000
Cons ci ratio: 5.312554e-03	ci left: 6.281493e-01	ci right 6.314983e-01	k: 201544	n:320000
KS ci ratio: 1.085419e-01	ci left: 3.838971e-03	ci right 4.282585e-03	k: 1298	n:320000
TRIM48   320000 perm   97 sec   (3296 perm/sec)   p_kst 4.056250e-03   p_cons 6.298250e-01   p_joint 2.317937e-01

Joint ci ratio: 1.242621e-02	ci left: 2.302522e-01	ci right 2.331343e-01	k: 76458	n:330000
Cons ci ratio: 5.229853e-03	ci left: 6.283167e-01	ci right 6.316143e-01	k: 207889	n:330000
KS ci ratio: 1.065893e-01	ci left: 3.864182e-03	ci right 4.302173e-03	k: 1346	n:330000
TRIM48   330000 perm   102 sec   (3249 perm/sec)   p_kst 4.078788e-03   p_cons 6.299667e-01   p_joint 2.316909e-01

Joint ci ratio: 1.223341e-02	ci left: 2.305262e-01	ci right 2.333666e-01	k: 78861	n:340000
Cons ci ratio: 5.150312e-03	ci left: 6.285277e-01	ci right 6.317760e-01	k: 214252	n:340000
KS ci ratio: 1.048894e-01	ci left: 3.876520e-03	ci right 4.308470e-03	k: 1390	n:340000
TRIM48   340000 perm   106 sec   (3204 perm/sec)   p_kst 4.088235e-03   p_cons 6.301529e-01   p_joint 2.319441e-01

Joint ci ratio: 1.214265e-02	ci left: 2.280507e-01	ci right 2.308395e-01	k: 80305	n:350000
Cons ci ratio: 5.078709e-03	ci left: 6.283208e-01	ci right 6.315228e-01	k: 220473	n:350000
KS ci ratio: 1.036681e-01	ci left: 3.857587e-03	ci right 4.282117e-03	k: 1423	n:350000
TRIM48   350000 perm   111 sec   (3157 perm/sec)   p_kst 4.065714e-03   p_cons 6.299229e-01   p_joint 2.294429e-01

Joint ci ratio: 1.188049e-02	ci left: 2.308132e-01	ci right 2.335745e-01	k: 83589	n:360000
Cons ci ratio: 5.005892e-03	ci left: 6.285094e-01	ci right 6.316663e-01	k: 226832	n:360000
KS ci ratio: 1.023124e-01	ci left: 3.853268e-03	ci right 4.271443e-03	k: 1461	n:360000
TRIM48   360000 perm   116 sec   (3115 perm/sec)   p_kst 4.058333e-03   p_cons 6.300889e-01   p_joint 2.321917e-01

Joint ci ratio: 1.180729e-02	ci left: 2.281674e-01	ci right 2.308801e-01	k: 84923	n:370000
Cons ci ratio: 4.936547e-03	ci left: 6.286475e-01	ci right 6.317612e-01	k: 233176	n:370000
KS ci ratio: 1.011100e-01	ci left: 3.841313e-03	ci right 4.253001e-03	k: 1496	n:370000
TRIM48   370000 perm   120 sec   (3073 perm/sec)   p_kst 4.043243e-03   p_cons 6.302054e-01   p_joint 2.295216e-01

Joint ci ratio: 1.182121e-02	ci left: 2.231032e-01	ci right 2.257589e-01	k: 85283	n:380000
Cons ci ratio: 4.871794e-03	ci left: 6.286075e-01	ci right 6.316800e-01	k: 239455	n:380000
KS ci ratio: 9.975316e-02	ci left: 3.845411e-03	ci right 4.251683e-03	k: 1537	n:380000
TRIM48   380000 perm   125 sec   (3034 perm/sec)   p_kst 4.044737e-03   p_cons 6.301447e-01   p_joint 2.244289e-01

Outputting figure to mutsig2_images.part000000000181/TRIM48.2_695_380000_0.0040447_0.63014_0.22443.png
                gene_name: TRIM48
               theta_stop: 0.100 
                    nperm: 380000 
                     p_ks: 0.0040 
        ci_ks_bounds_left: 0.0038 
       ci_ks_bounds_right: 0.0043 
                   p_cons: 0.63 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.63 
                  p_joint: 0.22 
     ci_joint_bounds_left: 0.22 
    ci_joint_bounds_right: 0.23 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000181
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 181 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1707>
Subject: Job 8704400: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1707>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000182> was used as the working directory.
Started at Thu Nov 15 19:37:24 2012
Results reported at Thu Nov 15 22:33:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000182.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000182.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 182  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000182.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  10713.61 sec.
    Max Memory :      6151 MB
    Max Swap   :      8556 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
182
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 182
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 182: processing genes 16375 - 16465
Calculating significance of each gene.
Using projection method.
16375	TRIM5	1
16376	TRIM50	1
16377	TRIM52	1.431819e-01
16378	TRIM54	1
16379	TRIM55	1
16380	TRIM56	2.101515e-01
16381	TRIM58	1
16382	TRIM59	1
16383	TRIM6	1
16384	TRIM6-TRIM34	3.202425e-01
16385	TRIM60	1
16386	TRIM61	1
16387	TRIM62	1
16388	TRIM63	1
16389	TRIM65	1
16390	TRIM67	1.333285e-01
16391	TRIM68	1
16392	TRIM69	1
16393	TRIM7	1
16394	TRIM71	1
16395	TRIM72	1
16396	TRIM73	1
16397	TRIM74	1
16398	TRIM8	1
16399	TRIM9	1
16400	TRIML1	1
16401	TRIML2	1
16402	TRIO	3.712090e-01
16403	TRIOBP	1
16404	TRIP10	1.872862e-01
16405	TRIP11	4.957408e-01
In gene TRIP12 the following bins exceed PROBCAP:
    THCA-DJ-A2Q1-TP	categ 6	N = 6106    n = 1	mu =   6.96e-08
16406	TRIP12	3.192076e-01
16407	TRIP13	1
16408	TRIP4	1
16409	TRIP6	1
16410	TRIT1	1
16411	TRMT1	1
16412	TRMT11	1
16413	TRMT112	1
16414	TRMT12	1
16415	TRMT2A	1
16416	TRMT2B	1
16417	TRMT5	1
16418	TRMT6	1
16419	TRMT61A	1
16420	TRMT61B	6.957574e-02
16421	TRMU	1
16422	TRNAU1AP	1
16423	TRNT1	1
16424	TRO	9.695103e-02
16425	TROAP	6.743749e-03
16426	TROVE2	1.332797e-01
16427	TRPA1	1.620394e-01
16428	TRPC1	1
16429	TRPC3	1
16430	TRPC4	3.322039e-01
16431	TRPC4AP	1
16432	TRPC5	1
16433	TRPC6	1
16434	TRPC7	1.371357e-01
16435	TRPM1	3.073071e-01
16436	TRPM2	5.585154e-01
16437	TRPM3	4.249367e-01
16438	TRPM4	5.180752e-04
16439	TRPM5	2.228817e-01
16440	TRPM6	1
16441	TRPM7	1
16442	TRPM8	1
16443	TRPS1	6.027333e-02
16444	TRPT1	1
16445	TRPV1	1
16446	TRPV2	1.722471e-01
16447	TRPV3	4.267647e-02
16448	TRPV4	2.175747e-01
16449	TRPV5	1.075268e-01
16450	TRPV6	1
16451	TRRAP	7.485864e-01
16452	TRUB1	1
16453	TRUB2	1
16454	TRYX3	1
16455	TSC1	1
16456	TSC2	1
16457	TSC22D1	1
16458	TSC22D2	1.464450e-01
16459	TSC22D3	1
16460	TSC22D4	1
16461	TSEN15	1
16462	TSEN2	1
16463	TSEN34	1
16464	TSEN54	1
16465	TSFM	4.956877e-02
Done

Running MutSig 2:
Scatter job 182: processing genes 16375 - 16465
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TROAP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.512569e-01	ci left: 1.014137e-02	ci right 1.454954e-02	k: 122	n:10000
Cons ci ratio: 1.568863e-03	ci left: 9.975272e-01	ci right 9.991602e-01	k: 9985	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
TROAP   10000 perm   2 sec   (5125 perm/sec)   p_kst 1.000000e-04   p_cons 9.985000e-01   p_joint 1.220000e-02

Joint ci ratio: 3.086535e-01	ci left: 6.766163e-03	ci right 9.280034e-03	k: 159	n:20000
Cons ci ratio: 1.160422e-03	ci left: 9.976252e-01	ci right 9.988224e-01	k: 19966	n:20000
KS ci ratio: 2.262987e+00	ci left: 1.211069e-05	ci right 3.611872e-04	k: 2	n:20000
TROAP   20000 perm   7 sec   (3003 perm/sec)   p_kst 1.000000e-04   p_cons 9.983000e-01   p_joint 7.950000e-03

Joint ci ratio: 3.994361e-01	ci left: 2.562755e-03	ci right 3.869722e-03	k: 95	n:30000
Cons ci ratio: 1.021493e-03	ci left: 9.974263e-01	ci right 9.984735e-01	k: 29940	n:30000
KS ci ratio: 2.263062e+00	ci left: 8.073745e-06	ci right 2.408020e-04	k: 2	n:30000
TROAP   30000 perm   9 sec   (3307 perm/sec)   p_kst 6.666667e-05   p_cons 9.980000e-01   p_joint 3.166667e-03

Joint ci ratio: 3.995980e-01	ci left: 1.921929e-03	ci right 2.902547e-03	k: 95	n:40000
Cons ci ratio: 8.494485e-04	ci left: 9.976780e-01	ci right 9.985471e-01	k: 39926	n:40000
KS ci ratio: 2.263100e+00	ci left: 6.055289e-06	ci right 1.806054e-04	k: 2	n:40000
TROAP   40000 perm   11 sec   (3481 perm/sec)   p_kst 5.000000e-05   p_cons 9.981500e-01   p_joint 2.375000e-03

Joint ci ratio: 3.651176e-01	ci left: 1.881076e-03	ci right 2.738348e-03	k: 114	n:50000
Cons ci ratio: 7.607937e-04	ci left: 9.977219e-01	ci right 9.984985e-01	k: 49907	n:50000
KS ci ratio: 2.263123e+00	ci left: 4.844222e-06	ci right 1.444862e-04	k: 2	n:50000
TROAP   50000 perm   14 sec   (3573 perm/sec)   p_kst 4.000000e-05   p_cons 9.981400e-01   p_joint 2.280000e-03

Joint ci ratio: 3.636078e-01	ci left: 1.582656e-03	ci right 2.300226e-03	k: 115	n:60000
Cons ci ratio: 7.012651e-04	ci left: 9.977180e-01	ci right 9.984325e-01	k: 59886	n:60000
KS ci ratio: 2.263138e+00	ci left: 4.036847e-06	ci right 1.204062e-04	k: 2	n:60000
TROAP   60000 perm   17 sec   (3620 perm/sec)   p_kst 3.333333e-05   p_cons 9.981000e-01   p_joint 1.916667e-03

Joint ci ratio: 4.129356e-01	ci left: 1.021182e-03	ci right 1.564373e-03	k: 89	n:70000
Cons ci ratio: 6.390691e-04	ci left: 9.978107e-01	ci right 9.984612e-01	k: 69871	n:70000
KS ci ratio: 2.263148e+00	ci left: 3.460151e-06	ci right 1.032060e-04	k: 2	n:70000
TROAP   70000 perm   19 sec   (3640 perm/sec)   p_kst 2.857143e-05   p_cons 9.981571e-01   p_joint 1.271429e-03

Joint ci ratio: 3.396223e-01	ci left: 1.380719e-03	ci right 1.956389e-03	k: 132	n:80000
Cons ci ratio: 6.066580e-04	ci left: 9.977732e-01	ci right 9.983898e-01	k: 79848	n:80000
KS ci ratio: 2.263156e+00	ci left: 3.027630e-06	ci right 9.030565e-05	k: 2	n:80000
TROAP   80000 perm   22 sec   (3644 perm/sec)   p_kst 2.500000e-05   p_cons 9.981000e-01   p_joint 1.650000e-03

Joint ci ratio: 3.358813e-01	ci left: 1.257798e-03	ci right 1.775187e-03	k: 135	n:90000
Cons ci ratio: 5.881752e-04	ci left: 9.976740e-01	ci right 9.982710e-01	k: 89819	n:90000
KS ci ratio: 2.263163e+00	ci left: 2.691226e-06	ci right 8.027198e-05	k: 2	n:90000
TROAP   90000 perm   25 sec   (3635 perm/sec)   p_kst 2.222222e-05   p_cons 9.979889e-01   p_joint 1.500000e-03

Joint ci ratio: 3.177107e-01	ci left: 1.278904e-03	ci right 1.770737e-03	k: 151	n:100000
Cons ci ratio: 5.631922e-04	ci left: 9.976497e-01	ci right 9.982208e-01	k: 99795	n:100000
KS ci ratio: 2.263168e+00	ci left: 2.422102e-06	ci right 7.224499e-05	k: 2	n:100000
TROAP   100000 perm   28 sec   (3618 perm/sec)   p_kst 2.000000e-05   p_cons 9.979500e-01   p_joint 1.510000e-03

Joint ci ratio: 3.166913e-01	ci left: 1.170996e-03	ci right 1.619591e-03	k: 152	n:110000
Cons ci ratio: 5.314944e-04	ci left: 9.977082e-01	ci right 9.982469e-01	k: 109779	n:110000
KS ci ratio: 2.263172e+00	ci left: 2.201910e-06	ci right 6.567742e-05	k: 2	n:110000
TROAP   110000 perm   31 sec   (3596 perm/sec)   p_kst 1.818182e-05   p_cons 9.979909e-01   p_joint 1.381818e-03

Joint ci ratio: 3.198652e-01	ci left: 1.050399e-03	ci right 1.457653e-03	k: 149	n:120000
Cons ci ratio: 5.149569e-04	ci left: 9.976686e-01	ci right 9.981902e-01	k: 119753	n:120000
KS ci ratio: 2.263175e+00	ci left: 2.018417e-06	ci right 6.020442e-05	k: 2	n:120000
TROAP   120000 perm   34 sec   (3569 perm/sec)   p_kst 1.666667e-05   p_cons 9.979417e-01   p_joint 1.241667e-03

Joint ci ratio: 3.607001e-01	ci left: 7.443796e-04	ci right 1.078530e-03	k: 117	n:130000
Cons ci ratio: 4.913607e-04	ci left: 9.977092e-01	ci right 9.982066e-01	k: 129736	n:130000
KS ci ratio: 2.263178e+00	ci left: 1.863154e-06	ci right 5.557340e-05	k: 2	n:130000
TROAP   130000 perm   37 sec   (3538 perm/sec)   p_kst 1.538462e-05   p_cons 9.979692e-01   p_joint 9.000000e-04

Joint ci ratio: 3.449765e-01	ci left: 7.628217e-04	ci right 1.086995e-03	k: 128	n:140000
Cons ci ratio: 4.698289e-04	ci left: 9.977518e-01	ci right 9.982272e-01	k: 139720	n:140000
KS ci ratio: 2.263181e+00	ci left: 1.730071e-06	ci right 5.160395e-05	k: 2	n:140000
TROAP   140000 perm   40 sec   (3508 perm/sec)   p_kst 1.428571e-05   p_cons 9.980000e-01   p_joint 9.142857e-04

Joint ci ratio: 3.476953e-01	ci left: 6.997892e-04	ci right 1.000047e-03	k: 126	n:150000
Cons ci ratio: 4.591021e-04	ci left: 9.977114e-01	ci right 9.981757e-01	k: 149693	n:150000
KS ci ratio: 2.263183e+00	ci left: 1.614733e-06	ci right 4.816375e-05	k: 2	n:150000
TROAP   150000 perm   43 sec   (3477 perm/sec)   p_kst 1.333333e-05   p_cons 9.979533e-01   p_joint 8.400000e-04

Joint ci ratio: 3.397647e-01	ci left: 6.903150e-04	ci right 9.782697e-04	k: 132	n:160000
Cons ci ratio: 4.428034e-04	ci left: 9.977357e-01	ci right 9.981834e-01	k: 159675	n:160000
KS ci ratio: 2.263185e+00	ci left: 1.513812e-06	ci right 4.515356e-05	k: 2	n:160000
TROAP   160000 perm   46 sec   (3443 perm/sec)   p_kst 1.250000e-05   p_cons 9.979687e-01   p_joint 8.250000e-04

Joint ci ratio: 3.397731e-01	ci left: 6.497058e-04	ci right 9.207286e-04	k: 132	n:170000
Cons ci ratio: 4.274806e-04	ci left: 9.977636e-01	ci right 9.981956e-01	k: 169658	n:170000
KS ci ratio: 2.263186e+00	ci left: 1.424764e-06	ci right 4.249751e-05	k: 2	n:170000
TROAP   170000 perm   50 sec   (3405 perm/sec)   p_kst 1.176471e-05   p_cons 9.979882e-01   p_joint 7.764706e-04

Joint ci ratio: 3.385094e-01	ci left: 6.186917e-04	ci right 8.756070e-04	k: 133	n:180000
Cons ci ratio: 4.176224e-04	ci left: 9.977475e-01	ci right 9.981695e-01	k: 179634	n:180000
KS ci ratio: 2.263188e+00	ci left: 1.345610e-06	ci right 4.013657e-05	k: 2	n:180000
TROAP   180000 perm   53 sec   (3369 perm/sec)   p_kst 1.111111e-05   p_cons 9.979667e-01   p_joint 7.388889e-04

Joint ci ratio: 3.323675e-01	ci left: 6.102281e-04	ci right 8.580473e-04	k: 138	n:190000
Cons ci ratio: 4.068052e-04	ci left: 9.977500e-01	ci right 9.981609e-01	k: 189613	n:190000
KS ci ratio: 2.263189e+00	ci left: 1.274788e-06	ci right 3.802415e-05	k: 2	n:190000
TROAP   190000 perm   57 sec   (3334 perm/sec)   p_kst 1.052632e-05   p_cons 9.979632e-01   p_joint 7.263158e-04

Joint ci ratio: 3.311837e-01	ci left: 5.842989e-04	ci right 8.205622e-04	k: 139	n:200000
Cons ci ratio: 3.928788e-04	ci left: 9.977943e-01	ci right 9.981911e-01	k: 199600	n:200000
KS ci ratio: 2.263190e+00	ci left: 1.211049e-06	ci right 3.612297e-05	k: 2	n:200000
TROAP   200000 perm   61 sec   (3300 perm/sec)   p_kst 1.000000e-05   p_cons 9.980000e-01   p_joint 6.950000e-04

Joint ci ratio: 3.276945e-01	ci left: 5.695786e-04	ci right 7.969522e-04	k: 142	n:210000
Cons ci ratio: 3.820167e-04	ci left: 9.978145e-01	ci right 9.982002e-01	k: 209583	n:210000
KS ci ratio: 2.263192e+00	ci left: 1.153380e-06	ci right 3.440285e-05	k: 2	n:210000
TROAP   210000 perm   64 sec   (3264 perm/sec)   p_kst 9.523810e-06   p_cons 9.980143e-01   p_joint 6.761905e-04

Joint ci ratio: 3.221129e-01	ci left: 5.645623e-04	ci right 7.853020e-04	k: 147	n:220000
Cons ci ratio: 3.737012e-04	ci left: 9.978138e-01	ci right 9.981910e-01	k: 219562	n:220000
KS ci ratio: 2.263192e+00	ci left: 1.100953e-06	ci right 3.283910e-05	k: 2	n:220000
TROAP   220000 perm   68 sec   (3230 perm/sec)   p_kst 9.090909e-06   p_cons 9.980091e-01   p_joint 6.681818e-04

Joint ci ratio: 3.188996e-01	ci left: 5.520098e-04	ci right 7.652487e-04	k: 150	n:230000
Cons ci ratio: 3.674946e-04	ci left: 9.977952e-01	ci right 9.981660e-01	k: 229537	n:230000
KS ci ratio: 2.263193e+00	ci left: 1.053086e-06	ci right 3.141133e-05	k: 2	n:230000
TROAP   230000 perm   72 sec   (3196 perm/sec)   p_kst 8.695652e-06   p_cons 9.979870e-01   p_joint 6.521739e-04

Joint ci ratio: 3.147596e-01	ci left: 5.443505e-04	ci right 7.513516e-04	k: 154	n:240000
Cons ci ratio: 3.619196e-04	ci left: 9.977739e-01	ci right 9.981390e-01	k: 239511	n:240000
KS ci ratio: 2.263194e+00	ci left: 1.009207e-06	ci right 3.010254e-05	k: 2	n:240000
TROAP   240000 perm   76 sec   (3162 perm/sec)   p_kst 8.333333e-06   p_cons 9.979625e-01   p_joint 6.416667e-04

Joint ci ratio: 3.098034e-01	ci left: 5.410092e-04	ci right 7.428601e-04	k: 159	n:250000
Cons ci ratio: 3.534162e-04	ci left: 9.977919e-01	ci right 9.981484e-01	k: 249494	n:250000
KS ci ratio: 2.263195e+00	ci left: 9.688386e-07	ci right 2.889845e-05	k: 2	n:250000
TROAP   250000 perm   80 sec   (3127 perm/sec)   p_kst 8.000000e-06   p_cons 9.979760e-01   p_joint 6.360000e-04

Joint ci ratio: 3.157884e-01	ci left: 4.989336e-04	ci right 6.894090e-04	k: 153	n:260000
Cons ci ratio: 3.464611e-04	ci left: 9.977966e-01	ci right 9.981460e-01	k: 259474	n:260000
KS ci ratio: 2.263196e+00	ci left: 9.315755e-07	ci right 2.778698e-05	k: 2	n:260000
TROAP   260000 perm   84 sec   (3094 perm/sec)   p_kst 7.692308e-06   p_cons 9.979769e-01   p_joint 5.884615e-04

Joint ci ratio: 3.157919e-01	ci left: 4.804538e-04	ci right 6.638765e-04	k: 153	n:270000
Cons ci ratio: 3.411439e-04	ci left: 9.977856e-01	ci right 9.981295e-01	k: 269450	n:270000
KS ci ratio: 2.263196e+00	ci left: 8.970727e-07	ci right 2.675784e-05	k: 2	n:270000
TROAP   270000 perm   88 sec   (3063 perm/sec)   p_kst 7.407407e-06   p_cons 9.979630e-01   p_joint 5.666667e-04

Joint ci ratio: 3.157952e-01	ci left: 4.632941e-04	ci right 6.401678e-04	k: 153	n:280000
Cons ci ratio: 3.342889e-04	ci left: 9.977977e-01	ci right 9.981347e-01	k: 279432	n:280000
KS ci ratio: 2.263197e+00	ci left: 8.650343e-07	ci right 2.580222e-05	k: 2	n:280000
TROAP   280000 perm   92 sec   (3033 perm/sec)   p_kst 7.142857e-06   p_cons 9.979714e-01   p_joint 5.464286e-04

Joint ci ratio: 3.078977e-01	ci left: 4.727466e-04	ci right 6.478303e-04	k: 161	n:290000
Cons ci ratio: 3.292220e-04	ci left: 9.977911e-01	ci right 9.981229e-01	k: 289409	n:290000
KS ci ratio: 1.959983e+00	ci left: 2.133357e-06	ci right 3.023168e-05	k: 3	n:290000
TROAP   290000 perm   97 sec   (3000 perm/sec)   p_kst 1.034483e-05   p_cons 9.979621e-01   p_joint 5.551724e-04

Joint ci ratio: 3.088559e-01	ci left: 4.539123e-04	ci right 6.226467e-04	k: 160	n:300000
Cons ci ratio: 3.246369e-04	ci left: 9.977816e-01	ci right 9.981087e-01	k: 299385	n:300000
KS ci ratio: 1.753060e+00	ci left: 3.632896e-06	ci right 3.413827e-05	k: 4	n:300000
TROAP   300000 perm   101 sec   (2969 perm/sec)   p_kst 1.333333e-05   p_cons 9.979500e-01   p_joint 5.333333e-04

Joint ci ratio: 3.199887e-01	ci left: 4.065833e-04	ci right 5.642900e-04	k: 149	n:310000
Cons ci ratio: 3.209794e-04	ci left: 9.977626e-01	ci right 9.980860e-01	k: 309358	n:310000
KS ci ratio: 1.753060e+00	ci left: 3.515706e-06	ci right 3.303705e-05	k: 4	n:310000
TROAP   310000 perm   106 sec   (2937 perm/sec)   p_kst 1.290323e-05   p_cons 9.979290e-01   p_joint 4.806452e-04

Joint ci ratio: 3.158061e-01	ci left: 4.053803e-04	ci right 5.601501e-04	k: 153	n:320000
Cons ci ratio: 3.150308e-04	ci left: 9.977774e-01	ci right 9.980947e-01	k: 319341	n:320000
KS ci ratio: 1.753061e+00	ci left: 3.405839e-06	ci right 3.200465e-05	k: 4	n:320000
TROAP   320000 perm   110 sec   (2908 perm/sec)   p_kst 1.250000e-05   p_cons 9.979406e-01   p_joint 4.781250e-04

Joint ci ratio: 3.158084e-01	ci left: 3.930956e-04	ci right 5.431765e-04	k: 153	n:330000
Cons ci ratio: 3.100782e-04	ci left: 9.977818e-01	ci right 9.980942e-01	k: 329321	n:330000
KS ci ratio: 1.753061e+00	ci left: 3.302632e-06	ci right 3.103482e-05	k: 4	n:330000
TROAP   330000 perm   115 sec   (2877 perm/sec)   p_kst 1.212121e-05   p_cons 9.979424e-01   p_joint 4.636364e-04

Joint ci ratio: 3.108031e-01	ci left: 3.950838e-04	ci right 5.430590e-04	k: 158	n:340000
Cons ci ratio: 3.044763e-04	ci left: 9.977983e-01	ci right 9.981049e-01	k: 339305	n:340000
KS ci ratio: 1.753062e+00	ci left: 3.205495e-06	ci right 3.012204e-05	k: 4	n:340000
TROAP   340000 perm   120 sec   (2842 perm/sec)   p_kst 1.176471e-05   p_cons 9.979559e-01   p_joint 4.647059e-04

Joint ci ratio: 2.945703e-01	ci left: 4.313230e-04	ci right 5.828609e-04	k: 176	n:350000
Cons ci ratio: 3.027133e-04	ci left: 9.977634e-01	ci right 9.980682e-01	k: 349272	n:350000
KS ci ratio: 1.600317e+00	ci left: 4.638548e-06	ci right 3.333777e-05	k: 5	n:350000
TROAP   350000 perm   124 sec   (2814 perm/sec)   p_kst 1.428571e-05   p_cons 9.979200e-01   p_joint 5.028571e-04

Joint ci ratio: 2.937434e-01	ci left: 4.219143e-04	ci right 5.696530e-04	k: 177	n:360000
Cons ci ratio: 2.981144e-04	ci left: 9.977709e-01	ci right 9.980710e-01	k: 359253	n:360000
KS ci ratio: 1.600318e+00	ci left: 4.509699e-06	ci right 3.241173e-05	k: 5	n:360000
TROAP   360000 perm   129 sec   (2785 perm/sec)   p_kst 1.388889e-05   p_cons 9.979250e-01   p_joint 4.916667e-04

Joint ci ratio: 2.904979e-01	ci left: 4.205299e-04	ci right 5.658578e-04	k: 181	n:370000
Cons ci ratio: 2.921785e-04	ci left: 9.978003e-01	ci right 9.980945e-01	k: 369242	n:370000
KS ci ratio: 1.600318e+00	ci left: 4.387815e-06	ci right 3.153575e-05	k: 5	n:370000
TROAP   370000 perm   134 sec   (2758 perm/sec)   p_kst 1.351351e-05   p_cons 9.979514e-01   p_joint 4.891892e-04

Joint ci ratio: 2.979638e-01	ci left: 3.875257e-04	ci right 5.255414e-04	k: 172	n:380000
Cons ci ratio: 2.895080e-04	ci left: 9.977847e-01	ci right 9.980761e-01	k: 379215	n:380000
KS ci ratio: 1.481605e+00	ci left: 5.794480e-06	ci right 3.436672e-05	k: 6	n:380000
TROAP   380000 perm   139 sec   (2731 perm/sec)   p_kst 1.578947e-05   p_cons 9.979342e-01   p_joint 4.526316e-04

Joint ci ratio: 2.945780e-01	ci left: 3.870833e-04	ci right 5.230824e-04	k: 176	n:390000
Cons ci ratio: 2.863602e-04	ci left: 9.977778e-01	ci right 9.980660e-01	k: 389191	n:390000
KS ci ratio: 1.481606e+00	ci left: 5.645903e-06	ci right 3.348553e-05	k: 6	n:390000
TROAP   390000 perm   144 sec   (2703 perm/sec)   p_kst 1.538462e-05   p_cons 9.979256e-01   p_joint 4.512821e-04

Joint ci ratio: 3.411355e-01	ci left: 2.738291e-04	ci right 3.886130e-04	k: 131	n:400000
Cons ci ratio: 2.631969e-04	ci left: 9.980663e-01	ci right 9.983314e-01	k: 399281	n:400000
KS ci ratio: 1.481606e+00	ci left: 5.504755e-06	ci right 3.264840e-05	k: 6	n:400000
TROAP   400000 perm   149 sec   (2677 perm/sec)   p_kst 1.500000e-05   p_cons 9.982025e-01   p_joint 3.275000e-04

Joint ci ratio: 3.411369e-01	ci left: 2.671501e-04	ci right 3.791349e-04	k: 131	n:410000
Cons ci ratio: 2.592607e-04	ci left: 9.980781e-01	ci right 9.983392e-01	k: 409267	n:410000
KS ci ratio: 1.481606e+00	ci left: 5.370492e-06	ci right 3.185210e-05	k: 6	n:410000
TROAP   410000 perm   155 sec   (2642 perm/sec)   p_kst 1.463415e-05   p_cons 9.982122e-01   p_joint 3.195122e-04

Joint ci ratio: 3.373253e-01	ci left: 2.673239e-04	ci right 3.778570e-04	k: 134	n:420000
Cons ci ratio: 2.556599e-04	ci left: 9.980868e-01	ci right 9.983443e-01	k: 419252	n:420000
KS ci ratio: 1.481607e+00	ci left: 5.242623e-06	ci right 3.109372e-05	k: 6	n:420000
TROAP   420000 perm   161 sec   (2616 perm/sec)   p_kst 1.428571e-05   p_cons 9.982190e-01   p_joint 3.190476e-04

Joint ci ratio: 3.324359e-01	ci left: 2.696273e-04	ci right 3.791511e-04	k: 138	n:430000
Cons ci ratio: 2.528622e-04	ci left: 9.980856e-01	ci right 9.983402e-01	k: 429233	n:430000
KS ci ratio: 1.481607e+00	ci left: 5.120701e-06	ci right 3.037062e-05	k: 6	n:430000
TROAP   430000 perm   166 sec   (2593 perm/sec)   p_kst 1.395349e-05   p_cons 9.982163e-01   p_joint 3.209302e-04

Joint ci ratio: 3.348557e-01	ci left: 2.593345e-04	ci right 3.656096e-04	k: 136	n:440000
Cons ci ratio: 2.495161e-04	ci left: 9.980938e-01	ci right 9.983450e-01	k: 439218	n:440000
KS ci ratio: 1.481607e+00	ci left: 5.004321e-06	ci right 2.968038e-05	k: 6	n:440000
TROAP   440000 perm   171 sec   (2570 perm/sec)   p_kst 1.363636e-05   p_cons 9.982227e-01   p_joint 3.090909e-04

Joint ci ratio: 3.300715e-01	ci left: 2.617186e-04	ci right 3.671130e-04	k: 140	n:450000
Cons ci ratio: 2.469140e-04	ci left: 9.980925e-01	ci right 9.983411e-01	k: 449199	n:450000
KS ci ratio: 1.481608e+00	ci left: 4.893114e-06	ci right 2.902083e-05	k: 6	n:450000
TROAP   450000 perm   177 sec   (2546 perm/sec)   p_kst 1.333333e-05   p_cons 9.982200e-01   p_joint 3.111111e-04

Joint ci ratio: 3.243697e-01	ci left: 2.660059e-04	ci right 3.708914e-04	k: 145	n:460000
Cons ci ratio: 2.455810e-04	ci left: 9.980732e-01	ci right 9.983204e-01	k: 459172	n:460000
KS ci ratio: 1.481608e+00	ci left: 4.786741e-06	ci right 2.838994e-05	k: 6	n:460000
TROAP   460000 perm   182 sec   (2524 perm/sec)   p_kst 1.304348e-05   p_cons 9.982000e-01   p_joint 3.152174e-04

Joint ci ratio: 3.266163e-01	ci left: 2.564384e-04	ci right 3.583987e-04	k: 143	n:470000
Cons ci ratio: 2.428076e-04	ci left: 9.980768e-01	ci right 9.983212e-01	k: 469155	n:470000
KS ci ratio: 1.481608e+00	ci left: 4.684895e-06	ci right 2.778591e-05	k: 6	n:470000
TROAP   470000 perm   188 sec   (2502 perm/sec)   p_kst 1.276596e-05   p_cons 9.982021e-01   p_joint 3.042553e-04

Joint ci ratio: 3.243718e-01	ci left: 2.549221e-04	ci right 3.554380e-04	k: 145	n:480000
Cons ci ratio: 2.401257e-04	ci left: 9.980803e-01	ci right 9.983220e-01	k: 479138	n:480000
KS ci ratio: 1.481608e+00	ci left: 4.587293e-06	ci right 2.720704e-05	k: 6	n:480000
TROAP   480000 perm   193 sec   (2481 perm/sec)   p_kst 1.250000e-05   p_cons 9.982042e-01   p_joint 3.020833e-04

Joint ci ratio: 3.210898e-01	ci left: 2.553461e-04	ci right 3.548009e-04	k: 148	n:490000
Cons ci ratio: 2.376657e-04	ci left: 9.980815e-01	ci right 9.983207e-01	k: 489120	n:490000
KS ci ratio: 1.481609e+00	ci left: 4.493675e-06	ci right 2.665180e-05	k: 6	n:490000
TROAP   490000 perm   199 sec   (2461 perm/sec)   p_kst 1.224490e-05   p_cons 9.982041e-01   p_joint 3.020408e-04

Joint ci ratio: 3.200183e-01	ci left: 2.520782e-04	ci right 3.498654e-04	k: 149	n:500000
Cons ci ratio: 2.352797e-04	ci left: 9.980827e-01	ci right 9.983195e-01	k: 499102	n:500000
KS ci ratio: 1.481609e+00	ci left: 4.403801e-06	ci right 2.611876e-05	k: 6	n:500000
TROAP   500000 perm   205 sec   (2440 perm/sec)   p_kst 1.200000e-05   p_cons 9.982040e-01   p_joint 2.980000e-04

Joint ci ratio: 3.464385e-01	ci left: 2.076005e-04	ci right 2.962791e-04	k: 127	n:510000
Cons ci ratio: 2.328369e-04	ci left: 9.980859e-01	ci right 9.983202e-01	k: 509085	n:510000
KS ci ratio: 1.481609e+00	ci left: 4.317452e-06	ci right 2.560663e-05	k: 6	n:510000
TROAP   510000 perm   211 sec   (2420 perm/sec)   p_kst 1.176471e-05   p_cons 9.982059e-01   p_joint 2.490196e-04

Joint ci ratio: 3.424485e-01	ci left: 2.088784e-04	ci right 2.968477e-04	k: 130	n:520000
Cons ci ratio: 2.312096e-04	ci left: 9.980770e-01	ci right 9.983097e-01	k: 519062	n:520000
KS ci ratio: 1.481609e+00	ci left: 4.234423e-06	ci right 2.511420e-05	k: 6	n:520000
TROAP   520000 perm   217 sec   (2399 perm/sec)   p_kst 1.153846e-05   p_cons 9.981962e-01   p_joint 2.500000e-04

Joint ci ratio: 3.385933e-01	ci left: 2.101138e-04	ci right 2.973894e-04	k: 133	n:530000
Cons ci ratio: 2.287713e-04	ci left: 9.980822e-01	ci right 9.983123e-01	k: 529046	n:530000
KS ci ratio: 1.481610e+00	ci left: 4.154528e-06	ci right 2.464035e-05	k: 6	n:530000
TROAP   530000 perm   223 sec   (2379 perm/sec)   p_kst 1.132075e-05   p_cons 9.982000e-01   p_joint 2.509434e-04

Joint ci ratio: 3.411502e-01	ci left: 2.028350e-04	ci right 2.878638e-04	k: 131	n:540000
Cons ci ratio: 2.265242e-04	ci left: 9.980852e-01	ci right 9.983131e-01	k: 539029	n:540000
KS ci ratio: 1.481610e+00	ci left: 4.077593e-06	ci right 2.418405e-05	k: 6	n:540000
TROAP   540000 perm   229 sec   (2359 perm/sec)   p_kst 1.111111e-05   p_cons 9.982019e-01   p_joint 2.425926e-04

Joint ci ratio: 3.478033e-01	ci left: 1.908423e-04	ci right 2.727560e-04	k: 126	n:550000
Cons ci ratio: 2.242282e-04	ci left: 9.980900e-01	ci right 9.983156e-01	k: 549013	n:550000
KS ci ratio: 1.481610e+00	ci left: 4.003454e-06	ci right 2.374435e-05	k: 6	n:550000
TROAP   550000 perm   235 sec   (2340 perm/sec)   p_kst 1.090909e-05   p_cons 9.982055e-01   p_joint 2.290909e-04

Joint ci ratio: 3.464424e-01	ci left: 1.890644e-04	ci right 2.698262e-04	k: 127	n:560000
Cons ci ratio: 2.215564e-04	ci left: 9.981020e-01	ci right 9.983249e-01	k: 559001	n:560000
KS ci ratio: 1.481610e+00	ci left: 3.931964e-06	ci right 2.332034e-05	k: 6	n:560000
TROAP   560000 perm   241 sec   (2320 perm/sec)   p_kst 1.071429e-05   p_cons 9.982161e-01   p_joint 2.267857e-04

Joint ci ratio: 3.464431e-01	ci left: 1.857475e-04	ci right 2.650925e-04	k: 127	n:570000
Cons ci ratio: 2.197278e-04	ci left: 9.981010e-01	ci right 9.983220e-01	k: 568982	n:570000
KS ci ratio: 1.481610e+00	ci left: 3.862982e-06	ci right 2.291122e-05	k: 6	n:570000
TROAP   570000 perm   248 sec   (2301 perm/sec)   p_kst 1.052632e-05   p_cons 9.982140e-01   p_joint 2.228070e-04

Joint ci ratio: 3.437679e-01	ci left: 1.856943e-04	ci right 2.642679e-04	k: 129	n:580000
Cons ci ratio: 2.180486e-04	ci left: 9.980982e-01	ci right 9.983175e-01	k: 578962	n:580000
KS ci ratio: 1.481611e+00	ci left: 3.796379e-06	ci right 2.251620e-05	k: 6	n:580000
TROAP   580000 perm   254 sec   (2282 perm/sec)   p_kst 1.034483e-05   p_cons 9.982103e-01   p_joint 2.224138e-04

Joint ci ratio: 3.398685e-01	ci left: 1.871953e-04	ci right 2.653083e-04	k: 132	n:590000
Cons ci ratio: 2.166111e-04	ci left: 9.980920e-01	ci right 9.983098e-01	k: 588940	n:590000
KS ci ratio: 1.481611e+00	ci left: 3.732033e-06	ci right 2.213457e-05	k: 6	n:590000
TROAP   590000 perm   261 sec   (2264 perm/sec)   p_kst 1.016949e-05   p_cons 9.982034e-01   p_joint 2.237288e-04

Joint ci ratio: 3.373416e-01	ci left: 1.871253e-04	ci right 2.645022e-04	k: 134	n:600000
Cons ci ratio: 2.143010e-04	ci left: 9.981015e-01	ci right 9.983170e-01	k: 598927	n:600000
KS ci ratio: 1.481611e+00	ci left: 3.669832e-06	ci right 2.176566e-05	k: 6	n:600000
TROAP   600000 perm   267 sec   (2245 perm/sec)   p_kst 1.000000e-05   p_cons 9.982117e-01   p_joint 2.233333e-04

Joint ci ratio: 3.373423e-01	ci left: 1.840576e-04	ci right 2.601662e-04	k: 134	n:610000
Cons ci ratio: 2.127418e-04	ci left: 9.980988e-01	ci right 9.983128e-01	k: 608907	n:610000
KS ci ratio: 1.481611e+00	ci left: 3.609671e-06	ci right 2.140885e-05	k: 6	n:610000
TROAP   610000 perm   274 sec   (2227 perm/sec)   p_kst 9.836066e-06   p_cons 9.982082e-01   p_joint 2.196721e-04

Joint ci ratio: 3.336552e-01	ci left: 1.855201e-04	ci right 2.612148e-04	k: 137	n:620000
Cons ci ratio: 2.105496e-04	ci left: 9.981079e-01	ci right 9.983196e-01	k: 618894	n:620000
KS ci ratio: 1.481611e+00	ci left: 3.551450e-06	ci right 2.106355e-05	k: 6	n:620000
TROAP   620000 perm   281 sec   (2210 perm/sec)   p_kst 9.677419e-06   p_cons 9.982161e-01   p_joint 2.209677e-04

Joint ci ratio: 3.771695e-01	ci left: 1.391910e-04	ci right 2.052322e-04	k: 107	n:630000
Cons ci ratio: 2.086993e-04	ci left: 9.981118e-01	ci right 9.983217e-01	k: 628878	n:630000
KS ci ratio: 1.306656e+00	ci left: 5.482289e-06	ci right 2.502078e-05	k: 8	n:630000
TROAP   630000 perm   287 sec   (2192 perm/sec)   p_kst 1.269841e-05   p_cons 9.982190e-01   p_joint 1.698413e-04

Joint ci ratio: 3.737249e-01	ci left: 1.398463e-04	ci right 2.054440e-04	k: 109	n:640000
Cons ci ratio: 2.068055e-04	ci left: 9.981172e-01	ci right 9.983251e-01	k: 638863	n:640000
KS ci ratio: 1.239602e+00	ci left: 6.430290e-06	ci right 2.669484e-05	k: 9	n:640000
TROAP   640000 perm   294 sec   (2175 perm/sec)   p_kst 1.406250e-05   p_cons 9.982234e-01   p_joint 1.703125e-04

Joint ci ratio: 3.703730e-01	ci left: 1.404841e-04	ci right 2.056466e-04	k: 111	n:650000
Cons ci ratio: 2.051390e-04	ci left: 9.981193e-01	ci right 9.983255e-01	k: 648846	n:650000
KS ci ratio: 1.239602e+00	ci left: 6.331362e-06	ci right 2.628415e-05	k: 9	n:650000
TROAP   650000 perm   301 sec   (2158 perm/sec)   p_kst 1.384615e-05   p_cons 9.982246e-01   p_joint 1.707692e-04

Joint ci ratio: 3.703735e-01	ci left: 1.383555e-04	ci right 2.025308e-04	k: 111	n:660000
Cons ci ratio: 2.033381e-04	ci left: 9.981244e-01	ci right 9.983288e-01	k: 658831	n:660000
KS ci ratio: 1.239603e+00	ci left: 6.235432e-06	ci right 2.588591e-05	k: 9	n:660000
TROAP   660000 perm   308 sec   (2141 perm/sec)   p_kst 1.363636e-05   p_cons 9.982288e-01   p_joint 1.681818e-04

Joint ci ratio: 3.687312e-01	ci left: 1.376444e-04	ci right 2.011385e-04	k: 112	n:670000
Cons ci ratio: 2.017530e-04	ci left: 9.981263e-01	ci right 9.983291e-01	k: 668814	n:670000
KS ci ratio: 1.239603e+00	ci left: 6.142366e-06	ci right 2.549955e-05	k: 9	n:670000
TROAP   670000 perm   315 sec   (2125 perm/sec)   p_kst 1.343284e-05   p_cons 9.982299e-01   p_joint 1.671642e-04

Joint ci ratio: 3.687317e-01	ci left: 1.356202e-04	ci right 1.981807e-04	k: 112	n:680000
Cons ci ratio: 2.005373e-04	ci left: 9.981221e-01	ci right 9.983237e-01	k: 678793	n:680000
KS ci ratio: 1.239603e+00	ci left: 6.052037e-06	ci right 2.512456e-05	k: 9	n:680000
TROAP   680000 perm   323 sec   (2108 perm/sec)   p_kst 1.323529e-05   p_cons 9.982250e-01   p_joint 1.647059e-04

Joint ci ratio: 3.639320e-01	ci left: 1.376023e-04	ci right 2.000548e-04	k: 115	n:690000
Cons ci ratio: 1.994231e-04	ci left: 9.981165e-01	ci right 9.983170e-01	k: 688771	n:690000
KS ci ratio: 1.181914e+00	ci left: 6.949860e-06	ci right 2.665253e-05	k: 10	n:690000
TROAP   690000 perm   330 sec   (2092 perm/sec)   p_kst 1.449275e-05   p_cons 9.982188e-01   p_joint 1.666667e-04

Joint ci ratio: 3.623736e-01	ci left: 1.369348e-04	ci right 1.987552e-04	k: 116	n:700000
Cons ci ratio: 1.980073e-04	ci left: 9.981170e-01	ci right 9.983160e-01	k: 698753	n:700000
KS ci ratio: 1.181914e+00	ci left: 6.850576e-06	ci right 2.627178e-05	k: 10	n:700000
TROAP   700000 perm   337 sec   (2075 perm/sec)   p_kst 1.428571e-05   p_cons 9.982186e-01   p_joint 1.657143e-04

Joint ci ratio: 3.593154e-01	ci left: 1.375677e-04	ci right 1.990270e-04	k: 118	n:710000
Cons ci ratio: 1.965435e-04	ci left: 9.981189e-01	ci right 9.983164e-01	k: 708736	n:710000
KS ci ratio: 1.181914e+00	ci left: 6.754089e-06	ci right 2.590176e-05	k: 10	n:710000
TROAP   710000 perm   345 sec   (2057 perm/sec)   p_kst 1.408451e-05   p_cons 9.982197e-01   p_joint 1.661972e-04

Joint ci ratio: 3.578153e-01	ci left: 1.369208e-04	ci right 1.977763e-04	k: 119	n:720000
Cons ci ratio: 1.948828e-04	ci left: 9.981250e-01	ci right 9.983209e-01	k: 718722	n:720000
KS ci ratio: 1.181915e+00	ci left: 6.660282e-06	ci right 2.554201e-05	k: 10	n:720000
TROAP   720000 perm   353 sec   (2042 perm/sec)   p_kst 1.388889e-05   p_cons 9.982250e-01   p_joint 1.652778e-04

Joint ci ratio: 3.578157e-01	ci left: 1.350451e-04	ci right 1.950671e-04	k: 119	n:730000
Cons ci ratio: 1.943071e-04	ci left: 9.981113e-01	ci right 9.983066e-01	k: 728694	n:730000
KS ci ratio: 1.181915e+00	ci left: 6.569045e-06	ci right 2.519212e-05	k: 10	n:730000
TROAP   730000 perm   360 sec   (2026 perm/sec)   p_kst 1.369863e-05   p_cons 9.982110e-01   p_joint 1.630137e-04

Joint ci ratio: 3.578161e-01	ci left: 1.332202e-04	ci right 1.924311e-04	k: 119	n:740000
Cons ci ratio: 2.068747e-04	ci left: 9.978388e-01	ci right 9.980465e-01	k: 738479	n:740000
KS ci ratio: 1.181915e+00	ci left: 6.480273e-06	ci right 2.485169e-05	k: 10	n:740000
TROAP   740000 perm   368 sec   (2011 perm/sec)   p_kst 1.351351e-05   p_cons 9.979446e-01   p_joint 1.608108e-04

Joint ci ratio: 3.563347e-01	ci left: 1.326576e-04	ci right 1.913178e-04	k: 120	n:750000
Cons ci ratio: 2.052526e-04	ci left: 9.978443e-01	ci right 9.980505e-01	k: 748462	n:750000
KS ci ratio: 1.181915e+00	ci left: 6.393870e-06	ci right 2.452034e-05	k: 10	n:750000
TROAP   750000 perm   376 sec   (1996 perm/sec)   p_kst 1.333333e-05   p_cons 9.979493e-01   p_joint 1.600000e-04

Joint ci ratio: 3.548714e-01	ci left: 1.321104e-04	ci right 1.902333e-04	k: 121	n:760000
Cons ci ratio: 2.036671e-04	ci left: 9.978498e-01	ci right 9.980543e-01	k: 758445	n:760000
KS ci ratio: 1.181915e+00	ci left: 6.309739e-06	ci right 2.419770e-05	k: 10	n:760000
TROAP   760000 perm   384 sec   (1982 perm/sec)   p_kst 1.315789e-05   p_cons 9.979539e-01   p_joint 1.592105e-04

Joint ci ratio: 3.578173e-01	ci left: 1.280297e-04	ci right 1.849339e-04	k: 119	n:770000
Cons ci ratio: 2.018591e-04	ci left: 9.978604e-01	ci right 9.980631e-01	k: 768432	n:770000
KS ci ratio: 1.181915e+00	ci left: 6.227795e-06	ci right 2.388345e-05	k: 10	n:770000
TROAP   770000 perm   392 sec   (1967 perm/sec)   p_kst 1.298701e-05   p_cons 9.979636e-01   p_joint 1.545455e-04

Joint ci ratio: 3.519982e-01	ci left: 1.310594e-04	ci right 1.881464e-04	k: 123	n:780000
Cons ci ratio: 2.006004e-04	ci left: 9.978602e-01	ci right 9.980617e-01	k: 778411	n:780000
KS ci ratio: 1.181915e+00	ci left: 6.147951e-06	ci right 2.357725e-05	k: 10	n:780000
TROAP   780000 perm   400 sec   (1952 perm/sec)   p_kst 1.282051e-05   p_cons 9.979628e-01   p_joint 1.576923e-04

Joint ci ratio: 3.491933e-01	ci left: 1.317091e-04	ci right 1.885185e-04	k: 125	n:790000
Cons ci ratio: 1.990546e-04	ci left: 9.978666e-01	ci right 9.980664e-01	k: 788395	n:790000
KS ci ratio: 1.181915e+00	ci left: 6.070128e-06	ci right 2.327881e-05	k: 10	n:790000
TROAP   790000 perm   408 sec   (1938 perm/sec)   p_kst 1.265823e-05   p_cons 9.979684e-01   p_joint 1.582278e-04

Joint ci ratio: 3.623774e-01	ci left: 1.198177e-04	ci right 1.739112e-04	k: 116	n:800000
Cons ci ratio: 1.974816e-04	ci left: 9.978740e-01	ci right 9.980723e-01	k: 798380	n:800000
KS ci ratio: 1.181916e+00	ci left: 5.994252e-06	ci right 2.298782e-05	k: 10	n:800000
TROAP   800000 perm   416 sec   (1924 perm/sec)   p_kst 1.250000e-05   p_cons 9.979750e-01   p_joint 1.450000e-04

Joint ci ratio: 3.563368e-01	ci left: 1.228310e-04	ci right 1.771463e-04	k: 120	n:810000
Cons ci ratio: 1.964228e-04	ci left: 9.978712e-01	ci right 9.980684e-01	k: 808357	n:810000
KS ci ratio: 1.181916e+00	ci left: 5.920248e-06	ci right 2.270403e-05	k: 10	n:810000
TROAP   810000 perm   424 sec   (1910 perm/sec)   p_kst 1.234568e-05   p_cons 9.979716e-01   p_joint 1.481481e-04

Joint ci ratio: 3.548735e-01	ci left: 1.224436e-04	ci right 1.763140e-04	k: 121	n:820000
Cons ci ratio: 1.950276e-04	ci left: 9.978759e-01	ci right 9.980717e-01	k: 818340	n:820000
KS ci ratio: 1.181916e+00	ci left: 5.848050e-06	ci right 2.242715e-05	k: 10	n:820000
TROAP   820000 perm   432 sec   (1897 perm/sec)   p_kst 1.219512e-05   p_cons 9.979756e-01   p_joint 1.475610e-04

Joint ci ratio: 3.655163e-01	ci left: 1.132976e-04	ci right 1.649963e-04	k: 114	n:830000
Cons ci ratio: 1.943536e-04	ci left: 9.978657e-01	ci right 9.980609e-01	k: 828311	n:830000
KS ci ratio: 1.181916e+00	ci left: 5.777591e-06	ci right 2.215694e-05	k: 10	n:830000
TROAP   830000 perm   441 sec   (1884 perm/sec)   p_kst 1.204819e-05   p_cons 9.979651e-01   p_joint 1.373494e-04

Joint ci ratio: 3.623787e-01	ci left: 1.141121e-04	ci right 1.656298e-04	k: 116	n:840000
Cons ci ratio: 1.929463e-04	ci left: 9.978717e-01	ci right 9.980654e-01	k: 838295	n:840000
KS ci ratio: 1.181916e+00	ci left: 5.708810e-06	ci right 2.189317e-05	k: 10	n:840000
TROAP   840000 perm   449 sec   (1871 perm/sec)   p_kst 1.190476e-05   p_cons 9.979702e-01   p_joint 1.380952e-04

Joint ci ratio: 3.578199e-01	ci left: 1.159797e-04	ci right 1.675286e-04	k: 119	n:850000
Cons ci ratio: 1.917351e-04	ci left: 9.978738e-01	ci right 9.980663e-01	k: 848276	n:850000
KS ci ratio: 1.181916e+00	ci left: 5.641648e-06	ci right 2.163561e-05	k: 10	n:850000
TROAP   850000 perm   458 sec   (1857 perm/sec)   p_kst 1.176471e-05   p_cons 9.979718e-01   p_joint 1.400000e-04

Joint ci ratio: 3.563384e-01	ci left: 1.156896e-04	ci right 1.668472e-04	k: 120	n:860000
Cons ci ratio: 1.906010e-04	ci left: 9.978747e-01	ci right 9.980661e-01	k: 858256	n:860000
KS ci ratio: 1.181916e+00	ci left: 5.576047e-06	ci right 2.138403e-05	k: 10	n:860000
TROAP   860000 perm   466 sec   (1844 perm/sec)   p_kst 1.162791e-05   p_cons 9.979721e-01   p_joint 1.395349e-04

Joint ci ratio: 3.548750e-01	ci left: 1.154066e-04	ci right 1.661812e-04	k: 121	n:870000
Cons ci ratio: 1.893253e-04	ci left: 9.978792e-01	ci right 9.980692e-01	k: 868239	n:870000
KS ci ratio: 1.181916e+00	ci left: 5.511954e-06	ci right 2.113824e-05	k: 10	n:870000
TROAP   870000 perm   475 sec   (1832 perm/sec)   p_kst 1.149425e-05   p_cons 9.979759e-01   p_joint 1.390805e-04

Joint ci ratio: 3.534296e-01	ci left: 1.151304e-04	ci right 1.655298e-04	k: 122	n:880000
Cons ci ratio: 1.882332e-04	ci left: 9.978800e-01	ci right 9.980690e-01	k: 878219	n:880000
KS ci ratio: 1.181916e+00	ci left: 5.449318e-06	ci right 2.089803e-05	k: 10	n:880000
TROAP   880000 perm   484 sec   (1819 perm/sec)   p_kst 1.136364e-05   p_cons 9.979761e-01   p_joint 1.386364e-04

Joint ci ratio: 3.563392e-01	ci left: 1.117899e-04	ci right 1.612232e-04	k: 120	n:890000
Cons ci ratio: 1.871597e-04	ci left: 9.978808e-01	ci right 9.980687e-01	k: 888199	n:890000
KS ci ratio: 1.131598e+00	ci left: 6.169859e-06	ci right 2.211454e-05	k: 11	n:890000
TROAP   890000 perm   493 sec   (1807 perm/sec)   p_kst 1.235955e-05   p_cons 9.979764e-01   p_joint 1.348315e-04

Joint ci ratio: 3.563395e-01	ci left: 1.105478e-04	ci right 1.594319e-04	k: 120	n:900000
Cons ci ratio: 1.861044e-04	ci left: 9.978817e-01	ci right 9.980685e-01	k: 898179	n:900000
KS ci ratio: 1.131598e+00	ci left: 6.101305e-06	ci right 2.186883e-05	k: 11	n:900000
TROAP   900000 perm   501 sec   (1795 perm/sec)   p_kst 1.222222e-05   p_cons 9.979767e-01   p_joint 1.333333e-04

Joint ci ratio: 3.548761e-01	ci left: 1.103337e-04	ci right 1.588766e-04	k: 121	n:910000
Cons ci ratio: 1.849156e-04	ci left: 9.978858e-01	ci right 9.980714e-01	k: 908162	n:910000
KS ci ratio: 1.131598e+00	ci left: 6.034257e-06	ci right 2.162851e-05	k: 11	n:910000
TROAP   910000 perm   510 sec   (1783 perm/sec)   p_kst 1.208791e-05   p_cons 9.979802e-01   p_joint 1.329670e-04

Joint ci ratio: 3.534307e-01	ci left: 1.101247e-04	ci right 1.583329e-04	k: 122	n:920000
Cons ci ratio: 1.841947e-04	ci left: 9.978799e-01	ci right 9.980648e-01	k: 918136	n:920000
KS ci ratio: 1.131599e+00	ci left: 5.968667e-06	ci right 2.139342e-05	k: 11	n:920000
TROAP   920000 perm   520 sec   (1771 perm/sec)   p_kst 1.195652e-05   p_cons 9.979739e-01   p_joint 1.326087e-04

Joint ci ratio: 3.534309e-01	ci left: 1.089405e-04	ci right 1.566304e-04	k: 122	n:930000
Cons ci ratio: 1.832859e-04	ci left: 9.978785e-01	ci right 9.980625e-01	k: 928114	n:930000
KS ci ratio: 1.131599e+00	ci left: 5.904488e-06	ci right 2.116338e-05	k: 11	n:930000
TROAP   930000 perm   529 sec   (1759 perm/sec)   p_kst 1.182796e-05   p_cons 9.979720e-01   p_joint 1.311828e-04

Joint ci ratio: 3.491978e-01	ci left: 1.106915e-04	ci right 1.584361e-04	k: 125	n:940000
Cons ci ratio: 1.823423e-04	ci left: 9.978782e-01	ci right 9.980612e-01	k: 938093	n:940000
KS ci ratio: 1.131599e+00	ci left: 5.841674e-06	ci right 2.093824e-05	k: 11	n:940000
TROAP   940000 perm   538 sec   (1747 perm/sec)   p_kst 1.170213e-05   p_cons 9.979713e-01   p_joint 1.329787e-04

Joint ci ratio: 3.266417e-01	ci left: 1.268680e-04	ci right 1.773155e-04	k: 143	n:950000
Cons ci ratio: 1.816015e-04	ci left: 9.978737e-01	ci right 9.980559e-01	k: 948068	n:950000
KS ci ratio: 1.131599e+00	ci left: 5.780183e-06	ci right 2.071784e-05	k: 11	n:950000
TROAP   950000 perm   547 sec   (1735 perm/sec)   p_kst 1.157895e-05   p_cons 9.979663e-01   p_joint 1.505263e-04

Joint ci ratio: 3.373560e-01	ci left: 1.169526e-04	ci right 1.653152e-04	k: 134	n:960000
Cons ci ratio: 1.804517e-04	ci left: 9.978788e-01	ci right 9.980599e-01	k: 958052	n:960000
KS ci ratio: 1.131599e+00	ci left: 5.719972e-06	ci right 2.050203e-05	k: 11	n:960000
TROAP   960000 perm   557 sec   (1724 perm/sec)   p_kst 1.145833e-05   p_cons 9.979708e-01   p_joint 1.395833e-04

Joint ci ratio: 3.386129e-01	ci left: 1.148034e-04	ci right 1.624928e-04	k: 133	n:970000
Cons ci ratio: 1.794596e-04	ci left: 9.978806e-01	ci right 9.980607e-01	k: 968033	n:970000
KS ci ratio: 1.131599e+00	ci left: 5.661003e-06	ci right 2.029067e-05	k: 11	n:970000
TROAP   970000 perm   566 sec   (1713 perm/sec)   p_kst 1.134021e-05   p_cons 9.979722e-01   p_joint 1.371134e-04

Joint ci ratio: 3.373565e-01	ci left: 1.145658e-04	ci right 1.619414e-04	k: 134	n:980000
Cons ci ratio: 1.785737e-04	ci left: 9.978803e-01	ci right 9.980595e-01	k: 978012	n:980000
KS ci ratio: 1.131599e+00	ci left: 5.603238e-06	ci right 2.008362e-05	k: 11	n:980000
TROAP   980000 perm   576 sec   (1702 perm/sec)   p_kst 1.122449e-05   p_cons 9.979714e-01   p_joint 1.367347e-04

Joint ci ratio: 3.361140e-01	ci left: 1.143332e-04	ci right 1.614008e-04	k: 135	n:990000
Cons ci ratio: 1.776121e-04	ci left: 9.978821e-01	ci right 9.980604e-01	k: 987993	n:990000
KS ci ratio: 1.131599e+00	ci left: 5.546639e-06	ci right 1.988076e-05	k: 11	n:990000
TROAP   990000 perm   585 sec   (1691 perm/sec)   p_kst 1.111111e-05   p_cons 9.979727e-01   p_joint 1.363636e-04

Joint ci ratio: 3.361142e-01	ci left: 1.131899e-04	ci right 1.597869e-04	k: 135	n:1000000
Cons ci ratio: 1.768404e-04	ci left: 9.978798e-01	ci right 9.980573e-01	k: 997970	n:1000000
KS ci ratio: 1.131599e+00	ci left: 5.491173e-06	ci right 1.968195e-05	k: 11	n:1000000
TROAP   1000000 perm   595 sec   (1681 perm/sec)   p_kst 1.100000e-05   p_cons 9.979700e-01   p_joint 1.350000e-04

Joint ci ratio: 3.348853e-01	ci left: 1.129759e-04	ci right 1.592780e-04	k: 136	n:1010000
Cons ci ratio: 1.759494e-04	ci left: 9.978806e-01	ci right 9.980571e-01	k: 1007950	n:1010000
KS ci ratio: 1.131599e+00	ci left: 5.436805e-06	ci right 1.948708e-05	k: 11	n:1010000
TROAP   1010000 perm   605 sec   (1670 perm/sec)   p_kst 1.089109e-05   p_cons 9.979703e-01   p_joint 1.346535e-04

Joint ci ratio: 3.324672e-01	ci left: 1.136648e-04	ci right 1.598409e-04	k: 138	n:1020000
Cons ci ratio: 1.749871e-04	ci left: 9.978833e-01	ci right 9.980589e-01	k: 1017932	n:1020000
KS ci ratio: 1.131599e+00	ci left: 5.383502e-06	ci right 1.929603e-05	k: 11	n:1020000
TROAP   1020000 perm   615 sec   (1660 perm/sec)   p_kst 1.078431e-05   p_cons 9.979725e-01   p_joint 1.352941e-04

Joint ci ratio: 3.451150e-01	ci left: 1.036780e-04	ci right 1.477579e-04	k: 128	n:1030000
Cons ci ratio: 1.739566e-04	ci left: 9.978880e-01	ci right 9.980626e-01	k: 1027916	n:1030000
KS ci ratio: 1.131599e+00	ci left: 5.331235e-06	ci right 1.910869e-05	k: 11	n:1030000
TROAP   1030000 perm   624 sec   (1650 perm/sec)   p_kst 1.067961e-05   p_cons 9.979767e-01   p_joint 1.242718e-04

Joint ci ratio: 3.437851e-01	ci left: 1.035595e-04	ci right 1.473815e-04	k: 129	n:1040000
Cons ci ratio: 1.730670e-04	ci left: 9.978897e-01	ci right 9.980633e-01	k: 1037897	n:1040000
KS ci ratio: 1.131599e+00	ci left: 5.279973e-06	ci right 1.892496e-05	k: 11	n:1040000
TROAP   1040000 perm   634 sec   (1640 perm/sec)   p_kst 1.057692e-05   p_cons 9.979779e-01   p_joint 1.240385e-04

Joint ci ratio: 3.424705e-01	ci left: 1.034435e-04	ci right 1.470120e-04	k: 130	n:1050000
Cons ci ratio: 1.723534e-04	ci left: 9.978874e-01	ci right 9.980603e-01	k: 1047874	n:1050000
KS ci ratio: 1.131600e+00	ci left: 5.229688e-06	ci right 1.874472e-05	k: 11	n:1050000
TROAP   1050000 perm   644 sec   (1630 perm/sec)   p_kst 1.047619e-05   p_cons 9.979752e-01   p_joint 1.238095e-04

Joint ci ratio: 3.411708e-01	ci left: 1.033301e-04	ci right 1.466492e-04	k: 131	n:1060000
Cons ci ratio: 1.712878e-04	ci left: 9.978938e-01	ci right 9.980657e-01	k: 1057860	n:1060000
KS ci ratio: 1.131600e+00	ci left: 5.180351e-06	ci right 1.856788e-05	k: 11	n:1060000
TROAP   1060000 perm   654 sec   (1620 perm/sec)   p_kst 1.037736e-05   p_cons 9.979811e-01   p_joint 1.235849e-04

Joint ci ratio: 3.386151e-01	ci left: 1.040740e-04	ci right 1.473067e-04	k: 133	n:1070000
Cons ci ratio: 1.703591e-04	ci left: 9.978973e-01	ci right 9.980682e-01	k: 1067843	n:1070000
KS ci ratio: 1.131600e+00	ci left: 5.131936e-06	ci right 1.839435e-05	k: 11	n:1070000
TROAP   1070000 perm   665 sec   (1610 perm/sec)   p_kst 1.028037e-05   p_cons 9.979841e-01   p_joint 1.242991e-04

Joint ci ratio: 3.386153e-01	ci left: 1.031104e-04	ci right 1.459428e-04	k: 133	n:1080000
Cons ci ratio: 1.694450e-04	ci left: 9.979007e-01	ci right 9.980707e-01	k: 1077826	n:1080000
KS ci ratio: 1.131600e+00	ci left: 5.084418e-06	ci right 1.822404e-05	k: 11	n:1080000
TROAP   1080000 perm   675 sec   (1601 perm/sec)   p_kst 1.018519e-05   p_cons 9.979870e-01   p_joint 1.231481e-04

Joint ci ratio: 3.373588e-01	ci left: 1.030040e-04	ci right 1.455989e-04	k: 134	n:1090000
Cons ci ratio: 1.685450e-04	ci left: 9.979040e-01	ci right 9.980731e-01	k: 1087809	n:1090000
KS ci ratio: 1.131600e+00	ci left: 5.037772e-06	ci right 1.805684e-05	k: 11	n:1090000
TROAP   1090000 perm   685 sec   (1591 perm/sec)   p_kst 1.009174e-05   p_cons 9.979899e-01   p_joint 1.229358e-04

Joint ci ratio: 3.361163e-01	ci left: 1.028998e-04	ci right 1.452609e-04	k: 135	n:1100000
Cons ci ratio: 1.677730e-04	ci left: 9.979045e-01	ci right 9.980728e-01	k: 1097789	n:1100000
KS ci ratio: 1.131600e+00	ci left: 4.991974e-06	ci right 1.789269e-05	k: 11	n:1100000
TROAP   1100000 perm   695 sec   (1582 perm/sec)   p_kst 1.000000e-05   p_cons 9.979900e-01   p_joint 1.227273e-04

Joint ci ratio: 3.324691e-01	ci left: 1.044487e-04	ci right 1.468810e-04	k: 138	n:1110000
Cons ci ratio: 1.671988e-04	ci left: 9.979004e-01	ci right 9.980681e-01	k: 1107764	n:1110000
KS ci ratio: 1.131600e+00	ci left: 4.947001e-06	ci right 1.773150e-05	k: 11	n:1110000
TROAP   1110000 perm   706 sec   (1572 perm/sec)   p_kst 9.909910e-06   p_cons 9.979856e-01   p_joint 1.243243e-04

Joint ci ratio: 3.324693e-01	ci left: 1.035161e-04	ci right 1.455696e-04	k: 138	n:1120000
Cons ci ratio: 1.664451e-04	ci left: 9.979009e-01	ci right 9.980679e-01	k: 1117744	n:1120000
KS ci ratio: 1.131600e+00	ci left: 4.902832e-06	ci right 1.757318e-05	k: 11	n:1120000
TROAP   1120000 perm   716 sec   (1563 perm/sec)   p_kst 9.821429e-06   p_cons 9.979857e-01   p_joint 1.232143e-04

Joint ci ratio: 3.324695e-01	ci left: 1.026000e-04	ci right 1.442813e-04	k: 138	n:1130000
Cons ci ratio: 1.656649e-04	ci left: 9.979023e-01	ci right 9.980685e-01	k: 1127725	n:1130000
KS ci ratio: 1.131600e+00	ci left: 4.859444e-06	ci right 1.741767e-05	k: 11	n:1130000
TROAP   1130000 perm   727 sec   (1554 perm/sec)   p_kst 9.734513e-06   p_cons 9.979867e-01   p_joint 1.221239e-04

Joint ci ratio: 3.301030e-01	ci left: 1.033085e-04	ci right 1.449155e-04	k: 140	n:1140000
Cons ci ratio: 1.650036e-04	ci left: 9.979011e-01	ci right 9.980666e-01	k: 1137703	n:1140000
KS ci ratio: 1.131600e+00	ci left: 4.816817e-06	ci right 1.726488e-05	k: 11	n:1140000
TROAP   1140000 perm   738 sec   (1545 perm/sec)   p_kst 9.649123e-06   p_cons 9.979851e-01   p_joint 1.228070e-04

Joint ci ratio: 3.301032e-01	ci left: 1.024101e-04	ci right 1.436554e-04	k: 140	n:1150000
Cons ci ratio: 1.644919e-04	ci left: 9.978962e-01	ci right 9.980612e-01	k: 1147677	n:1150000
KS ci ratio: 1.131600e+00	ci left: 4.774931e-06	ci right 1.711475e-05	k: 11	n:1150000
TROAP   1150000 perm   749 sec   (1536 perm/sec)   p_kst 9.565217e-06   p_cons 9.979800e-01   p_joint 1.217391e-04

Joint ci ratio: 3.301033e-01	ci left: 1.015273e-04	ci right 1.424170e-04	k: 140	n:1160000
Cons ci ratio: 1.636690e-04	ci left: 9.978994e-01	ci right 9.980636e-01	k: 1157660	n:1160000
KS ci ratio: 1.131600e+00	ci left: 4.733768e-06	ci right 1.696721e-05	k: 11	n:1160000
TROAP   1160000 perm   760 sec   (1527 perm/sec)   p_kst 9.482759e-06   p_cons 9.979828e-01   p_joint 1.206897e-04

Joint ci ratio: 3.277867e-01	ci left: 1.022278e-04	ci right 1.430498e-04	k: 142	n:1170000
Cons ci ratio: 1.631692e-04	ci left: 9.978947e-01	ci right 9.980584e-01	k: 1167634	n:1170000
KS ci ratio: 1.131600e+00	ci left: 4.693309e-06	ci right 1.682219e-05	k: 11	n:1170000
TROAP   1170000 perm   771 sec   (1518 perm/sec)   p_kst 9.401709e-06   p_cons 9.979778e-01   p_joint 1.213675e-04

Joint ci ratio: 3.266466e-01	ci left: 1.021393e-04	ci right 1.427543e-04	k: 143	n:1180000
Cons ci ratio: 1.624685e-04	ci left: 9.978953e-01	ci right 9.980582e-01	k: 1177614	n:1180000
KS ci ratio: 1.131600e+00	ci left: 4.653535e-06	ci right 1.667963e-05	k: 11	n:1180000
TROAP   1180000 perm   782 sec   (1509 perm/sec)   p_kst 9.322034e-06   p_cons 9.979780e-01   p_joint 1.211864e-04

Joint ci ratio: 3.266468e-01	ci left: 1.012810e-04	ci right 1.415547e-04	k: 143	n:1190000
Cons ci ratio: 1.617767e-04	ci left: 9.978958e-01	ci right 9.980581e-01	k: 1187594	n:1190000
KS ci ratio: 1.087206e+00	ci left: 5.210578e-06	ci right 1.761471e-05	k: 12	n:1190000
TROAP   1190000 perm   793 sec   (1500 perm/sec)   p_kst 1.008403e-05   p_cons 9.979782e-01   p_joint 1.201681e-04

Joint ci ratio: 3.277872e-01	ci left: 9.967207e-05	ci right 1.394736e-04	k: 142	n:1200000
Cons ci ratio: 1.614259e-04	ci left: 9.978878e-01	ci right 9.980497e-01	k: 1197564	n:1200000
KS ci ratio: 1.047658e+00	ci left: 5.768306e-06	ci right 1.852526e-05	k: 13	n:1200000
TROAP   1200000 perm   805 sec   (1492 perm/sec)   p_kst 1.083333e-05   p_cons 9.979700e-01   p_joint 1.183333e-04

Joint ci ratio: 3.277874e-01	ci left: 9.884833e-05	ci right 1.383209e-04	k: 142	n:1210000
Cons ci ratio: 1.608784e-04	ci left: 9.978851e-01	ci right 9.980464e-01	k: 1207540	n:1210000
KS ci ratio: 1.047658e+00	ci left: 5.720634e-06	ci right 1.837216e-05	k: 13	n:1210000
TROAP   1210000 perm   816 sec   (1483 perm/sec)   p_kst 1.074380e-05   p_cons 9.979669e-01   p_joint 1.173554e-04

Joint ci ratio: 3.277875e-01	ci left: 9.803809e-05	ci right 1.371872e-04	k: 142	n:1220000
Cons ci ratio: 1.599153e-04	ci left: 9.978932e-01	ci right 9.980536e-01	k: 1217529	n:1220000
KS ci ratio: 1.047658e+00	ci left: 5.673743e-06	ci right 1.822157e-05	k: 13	n:1220000
TROAP   1220000 perm   827 sec   (1475 perm/sec)   p_kst 1.065574e-05   p_cons 9.979746e-01   p_joint 1.163934e-04

Joint ci ratio: 3.266474e-01	ci left: 9.798726e-05	ci right 1.369514e-04	k: 143	n:1230000
Cons ci ratio: 1.591594e-04	ci left: 9.978962e-01	ci right 9.980559e-01	k: 1227512	n:1230000
KS ci ratio: 1.047658e+00	ci left: 5.627615e-06	ci right 1.807342e-05	k: 13	n:1230000
TROAP   1230000 perm   839 sec   (1466 perm/sec)   p_kst 1.056911e-05   p_cons 9.979772e-01   p_joint 1.162602e-04

Joint ci ratio: 3.244023e-01	ci left: 9.867816e-05	ci right 1.375912e-04	k: 145	n:1240000
Cons ci ratio: 1.586355e-04	ci left: 9.978935e-01	ci right 9.980526e-01	k: 1237488	n:1240000
KS ci ratio: 1.012133e+00	ci left: 6.172538e-06	ci right 1.894317e-05	k: 14	n:1240000
TROAP   1240000 perm   850 sec   (1458 perm/sec)   p_kst 1.129032e-05   p_cons 9.979742e-01   p_joint 1.169355e-04

Joint ci ratio: 3.211196e-01	ci left: 1.000943e-04	ci right 1.390842e-04	k: 148	n:1250000
Cons ci ratio: 1.579288e-04	ci left: 9.978956e-01	ci right 9.980540e-01	k: 1247470	n:1250000
KS ci ratio: 1.012133e+00	ci left: 6.123157e-06	ci right 1.879163e-05	k: 14	n:1250000
TROAP   1250000 perm   862 sec   (1450 perm/sec)   p_kst 1.120000e-05   p_cons 9.979760e-01   p_joint 1.184000e-04

Joint ci ratio: 3.211198e-01	ci left: 9.929992e-05	ci right 1.379804e-04	k: 148	n:1260000
Cons ci ratio: 1.573241e-04	ci left: 9.978954e-01	ci right 9.980531e-01	k: 1257449	n:1260000
KS ci ratio: 1.012133e+00	ci left: 6.074561e-06	ci right 1.864249e-05	k: 14	n:1260000
TROAP   1260000 perm   874 sec   (1442 perm/sec)   p_kst 1.111111e-05   p_cons 9.979754e-01   p_joint 1.174603e-04

Joint ci ratio: 3.232973e-01	ci left: 9.707056e-05	ci right 1.351922e-04	k: 146	n:1270000
Cons ci ratio: 1.566957e-04	ci left: 9.978959e-01	ci right 9.980530e-01	k: 1267429	n:1270000
KS ci ratio: 1.012133e+00	ci left: 6.026729e-06	ci right 1.849570e-05	k: 14	n:1270000
TROAP   1270000 perm   886 sec   (1434 perm/sec)   p_kst 1.102362e-05   p_cons 9.979756e-01   p_joint 1.149606e-04

Joint ci ratio: 3.244029e-01	ci left: 9.559444e-05	ci right 1.332915e-04	k: 145	n:1280000
Cons ci ratio: 1.562859e-04	ci left: 9.978908e-01	ci right 9.980475e-01	k: 1277402	n:1280000
KS ci ratio: 1.012133e+00	ci left: 5.979646e-06	ci right 1.835120e-05	k: 14	n:1280000
TROAP   1280000 perm   897 sec   (1426 perm/sec)   p_kst 1.093750e-05   p_cons 9.979703e-01   p_joint 1.132813e-04

Joint ci ratio: 3.244030e-01	ci left: 9.485339e-05	ci right 1.322582e-04	k: 145	n:1290000
Cons ci ratio: 1.556103e-04	ci left: 9.978929e-01	ci right 9.980490e-01	k: 1287384	n:1290000
KS ci ratio: 1.012133e+00	ci left: 5.933292e-06	ci right 1.820894e-05	k: 14	n:1290000
TROAP   1290000 perm   909 sec   (1419 perm/sec)   p_kst 1.085271e-05   p_cons 9.979721e-01   p_joint 1.124031e-04

Joint ci ratio: 3.200481e-01	ci left: 9.695186e-05	ci right 1.345658e-04	k: 149	n:1300000
Cons ci ratio: 1.549138e-04	ci left: 9.978958e-01	ci right 9.980512e-01	k: 1297367	n:1300000
KS ci ratio: 1.012133e+00	ci left: 5.887651e-06	ci right 1.806887e-05	k: 14	n:1300000
TROAP   1300000 perm   922 sec   (1411 perm/sec)   p_kst 1.076923e-05   p_cons 9.979746e-01   p_joint 1.146154e-04

Joint ci ratio: 3.200482e-01	ci left: 9.621176e-05	ci right 1.335386e-04	k: 149	n:1310000
Cons ci ratio: 1.544303e-04	ci left: 9.978932e-01	ci right 9.980481e-01	k: 1307343	n:1310000
KS ci ratio: 1.012133e+00	ci left: 5.842707e-06	ci right 1.793094e-05	k: 14	n:1310000
TROAP   1310000 perm   934 sec   (1403 perm/sec)   p_kst 1.068702e-05   p_cons 9.979718e-01   p_joint 1.137405e-04

Joint ci ratio: 3.277890e-01	ci left: 9.061090e-05	ci right 1.267943e-04	k: 142	n:1320000
Cons ci ratio: 1.537783e-04	ci left: 9.978953e-01	ci right 9.980495e-01	k: 1317325	n:1320000
KS ci ratio: 1.012134e+00	ci left: 5.798444e-06	ci right 1.779510e-05	k: 14	n:1320000
TROAP   1320000 perm   946 sec   (1395 perm/sec)   p_kst 1.060606e-05   p_cons 9.979735e-01   p_joint 1.075758e-04

Joint ci ratio: 3.255204e-01	ci left: 9.131008e-05	ci right 1.274676e-04	k: 144	n:1330000
Cons ci ratio: 1.534757e-04	ci left: 9.978881e-01	ci right 9.980420e-01	k: 1327295	n:1330000
KS ci ratio: 1.012134e+00	ci left: 5.754846e-06	ci right 1.766131e-05	k: 14	n:1330000
TROAP   1330000 perm   958 sec   (1388 perm/sec)   p_kst 1.052632e-05   p_cons 9.979662e-01   p_joint 1.082707e-04

Joint ci ratio: 3.222041e-01	ci left: 9.268549e-05	ci right 1.289365e-04	k: 147	n:1340000
Cons ci ratio: 1.531450e-04	ci left: 9.978818e-01	ci right 9.980354e-01	k: 1337266	n:1340000
KS ci ratio: 1.012134e+00	ci left: 5.711900e-06	ci right 1.752951e-05	k: 14	n:1340000
TROAP   1340000 perm   971 sec   (1380 perm/sec)   p_kst 1.044776e-05   p_cons 9.979597e-01   p_joint 1.097015e-04

Joint ci ratio: 3.189871e-01	ci left: 9.404237e-05	ci right 1.303818e-04	k: 150	n:1350000
Cons ci ratio: 1.526208e-04	ci left: 9.978809e-01	ci right 9.980340e-01	k: 1347244	n:1350000
KS ci ratio: 9.799938e-01	ci left: 6.218817e-06	ci right 1.832602e-05	k: 15	n:1350000
TROAP   1350000 perm   983 sec   (1373 perm/sec)   p_kst 1.111111e-05   p_cons 9.979585e-01   p_joint 1.111111e-04

Joint ci ratio: 3.608495e-01	ci left: 7.114917e-05	ci right 1.031031e-04	k: 117	n:1360000
Cons ci ratio: 1.418897e-04	ci left: 9.981498e-01	ci right 9.982922e-01	k: 1357582	n:1360000
KS ci ratio: 9.799939e-01	ci left: 6.173091e-06	ci right 1.819127e-05	k: 15	n:1360000
TROAP   1360000 perm   996 sec   (1366 perm/sec)   p_kst 1.102941e-05   p_cons 9.982221e-01   p_joint 8.602941e-05

Joint ci ratio: 3.608496e-01	ci left: 7.062983e-05	ci right 1.023505e-04	k: 117	n:1370000
Cons ci ratio: 1.413771e-04	ci left: 9.981499e-01	ci right 9.982918e-01	k: 1367564	n:1370000
KS ci ratio: 9.799939e-01	ci left: 6.128032e-06	ci right 1.805849e-05	k: 15	n:1370000
TROAP   1370000 perm   1009 sec   (1358 perm/sec)   p_kst 1.094891e-05   p_cons 9.982219e-01   p_joint 8.540146e-05

Joint ci ratio: 3.593302e-01	ci left: 7.077710e-05	ci right 1.023988e-04	k: 118	n:1380000
Cons ci ratio: 1.407838e-04	ci left: 9.981522e-01	ci right 9.982935e-01	k: 1377549	n:1380000
KS ci ratio: 9.799940e-01	ci left: 6.083625e-06	ci right 1.792763e-05	k: 15	n:1380000
TROAP   1380000 perm   1021 sec   (1351 perm/sec)   p_kst 1.086957e-05   p_cons 9.982239e-01   p_joint 8.550725e-05

Joint ci ratio: 3.593303e-01	ci left: 7.026791e-05	ci right 1.016621e-04	k: 118	n:1390000
Cons ci ratio: 1.402546e-04	ci left: 9.981531e-01	ci right 9.982938e-01	k: 1387532	n:1390000
KS ci ratio: 9.799940e-01	ci left: 6.039858e-06	ci right 1.779866e-05	k: 15	n:1390000
TROAP   1390000 perm   1034 sec   (1344 perm/sec)   p_kst 1.079137e-05   p_cons 9.982245e-01   p_joint 8.489209e-05

Joint ci ratio: 3.578299e-01	ci left: 7.041594e-05	ci right 1.017143e-04	k: 119	n:1400000
Cons ci ratio: 1.396750e-04	ci left: 9.981553e-01	ci right 9.982955e-01	k: 1397517	n:1400000
KS ci ratio: 9.799940e-01	ci left: 5.996716e-06	ci right 1.767152e-05	k: 15	n:1400000
TROAP   1400000 perm   1047 sec   (1337 perm/sec)   p_kst 1.071429e-05   p_cons 9.982264e-01   p_joint 8.500000e-05

Joint ci ratio: 3.548846e-01	ci left: 7.120801e-05	ci right 1.025378e-04	k: 121	n:1410000
Cons ci ratio: 1.389629e-04	ci left: 9.981612e-01	ci right 9.983006e-01	k: 1407507	n:1410000
KS ci ratio: 9.799941e-01	ci left: 5.954186e-06	ci right 1.754619e-05	k: 15	n:1410000
TROAP   1410000 perm   1060 sec   (1330 perm/sec)   p_kst 1.063830e-05   p_cons 9.982319e-01   p_joint 8.581560e-05

Joint ci ratio: 3.754534e-01	ci left: 6.239089e-05	ci right 9.182513e-05	k: 108	n:1420000
Cons ci ratio: 1.384261e-04	ci left: 9.981626e-01	ci right 9.983015e-01	k: 1417491	n:1420000
KS ci ratio: 9.799941e-01	ci left: 5.912255e-06	ci right 1.742263e-05	k: 15	n:1420000
TROAP   1420000 perm   1073 sec   (1324 perm/sec)   p_kst 1.056338e-05   p_cons 9.982331e-01   p_joint 7.605634e-05

Joint ci ratio: 3.825386e-01	ci left: 5.942383e-05	ci right 8.812059e-05	k: 104	n:1430000
Cons ci ratio: 1.381140e-04	ci left: 9.981584e-01	ci right 9.982969e-01	k: 1427467	n:1430000
KS ci ratio: 9.799942e-01	ci left: 5.870911e-06	ci right 1.730079e-05	k: 15	n:1430000
TROAP   1430000 perm   1086 sec   (1317 perm/sec)   p_kst 1.048951e-05   p_cons 9.982287e-01   p_joint 7.272727e-05

Joint ci ratio: 3.825387e-01	ci left: 5.901116e-05	ci right 8.750864e-05	k: 104	n:1440000
Cons ci ratio: 1.377762e-04	ci left: 9.981549e-01	ci right 9.982931e-01	k: 1437444	n:1440000
KS ci ratio: 9.799942e-01	ci left: 5.830141e-06	ci right 1.718065e-05	k: 15	n:1440000
TROAP   1440000 perm   1099 sec   (1310 perm/sec)   p_kst 1.041667e-05   p_cons 9.982250e-01   p_joint 7.222222e-05

Joint ci ratio: 3.807300e-01	ci left: 5.922768e-05	ci right 8.766064e-05	k: 105	n:1450000
Cons ci ratio: 1.371731e-04	ci left: 9.981585e-01	ci right 9.982961e-01	k: 1447431	n:1450000
KS ci ratio: 9.799943e-01	ci left: 5.789933e-06	ci right 1.706216e-05	k: 15	n:1450000
TROAP   1450000 perm   1112 sec   (1304 perm/sec)   p_kst 1.034483e-05   p_cons 9.982283e-01   p_joint 7.241379e-05

Joint ci ratio: 3.789467e-01	ci left: 5.944155e-05	ci right 8.781025e-05	k: 106	n:1460000
Cons ci ratio: 1.366569e-04	ci left: 9.981599e-01	ci right 9.982970e-01	k: 1457415	n:1460000
KS ci ratio: 9.799943e-01	ci left: 5.750276e-06	ci right 1.694530e-05	k: 15	n:1460000
TROAP   1460000 perm   1126 sec   (1297 perm/sec)   p_kst 1.027397e-05   p_cons 9.982295e-01   p_joint 7.260274e-05

Joint ci ratio: 3.789468e-01	ci left: 5.903718e-05	ci right 8.721291e-05	k: 106	n:1470000
Cons ci ratio: 1.363036e-04	ci left: 9.981572e-01	ci right 9.982939e-01	k: 1467393	n:1470000
KS ci ratio: 9.799943e-01	ci left: 5.711158e-06	ci right 1.683003e-05	k: 15	n:1470000
TROAP   1470000 perm   1139 sec   (1290 perm/sec)   p_kst 1.020408e-05   p_cons 9.982265e-01   p_joint 7.210884e-05

Joint ci ratio: 3.737433e-01	ci left: 6.047358e-05	ci right 8.884152e-05	k: 109	n:1480000
Cons ci ratio: 1.357454e-04	ci left: 9.981600e-01	ci right 9.982962e-01	k: 1477379	n:1480000
KS ci ratio: 9.507339e-01	ci left: 6.179325e-06	ci right 1.755602e-05	k: 16	n:1480000
TROAP   1480000 perm   1153 sec   (1284 perm/sec)   p_kst 1.081081e-05   p_cons 9.982291e-01   p_joint 7.364865e-05

Joint ci ratio: 3.720560e-01	ci left: 6.067596e-05	ci right 8.897902e-05	k: 110	n:1490000
Cons ci ratio: 1.352193e-04	ci left: 9.981621e-01	ci right 9.982977e-01	k: 1487364	n:1490000
KS ci ratio: 9.507339e-01	ci left: 6.137853e-06	ci right 1.743820e-05	k: 16	n:1490000
TROAP   1490000 perm   1166 sec   (1278 perm/sec)   p_kst 1.073826e-05   p_cons 9.982309e-01   p_joint 7.382550e-05

Joint ci ratio: 3.720560e-01	ci left: 6.027145e-05	ci right 8.838583e-05	k: 110	n:1500000
Cons ci ratio: 1.346992e-04	ci left: 9.981641e-01	ci right 9.982993e-01	k: 1497349	n:1500000
KS ci ratio: 9.507339e-01	ci left: 6.096934e-06	ci right 1.732194e-05	k: 16	n:1500000
TROAP   1500000 perm   1180 sec   (1271 perm/sec)   p_kst 1.066667e-05   p_cons 9.982327e-01   p_joint 7.333333e-05

Joint ci ratio: 3.687487e-01	ci left: 6.107353e-05	ci right 8.924774e-05	k: 112	n:1510000
Cons ci ratio: 1.342353e-04	ci left: 9.981648e-01	ci right 9.982995e-01	k: 1507332	n:1510000
KS ci ratio: 9.239470e-01	ci left: 6.558375e-06	ci right 1.802553e-05	k: 17	n:1510000
TROAP   1510000 perm   1194 sec   (1265 perm/sec)   p_kst 1.125828e-05   p_cons 9.982331e-01   p_joint 7.417219e-05

Joint ci ratio: 3.639489e-01	ci left: 6.246374e-05	ci right 9.081516e-05	k: 115	n:1520000
Cons ci ratio: 1.339756e-04	ci left: 9.981601e-01	ci right 9.982945e-01	k: 1517307	n:1520000
KS ci ratio: 9.239471e-01	ci left: 6.515228e-06	ci right 1.790694e-05	k: 17	n:1520000
TROAP   1520000 perm   1208 sec   (1259 perm/sec)   p_kst 1.118421e-05   p_cons 9.982283e-01   p_joint 7.565789e-05

Joint ci ratio: 3.639489e-01	ci left: 6.205548e-05	ci right 9.022160e-05	k: 115	n:1530000
Cons ci ratio: 1.333711e-04	ci left: 9.981648e-01	ci right 9.982986e-01	k: 1527296	n:1530000
KS ci ratio: 9.239471e-01	ci left: 6.472645e-06	ci right 1.778991e-05	k: 17	n:1530000
TROAP   1530000 perm   1221 sec   (1253 perm/sec)   p_kst 1.111111e-05   p_cons 9.982327e-01   p_joint 7.516340e-05

Joint ci ratio: 3.608513e-01	ci left: 6.283298e-05	ci right 9.105219e-05	k: 117	n:1540000
Cons ci ratio: 1.329452e-04	ci left: 9.981649e-01	ci right 9.982982e-01	k: 1537278	n:1540000
KS ci ratio: 9.239472e-01	ci left: 6.430614e-06	ci right 1.767439e-05	k: 17	n:1540000
TROAP   1540000 perm   1235 sec   (1247 perm/sec)   p_kst 1.103896e-05   p_cons 9.982325e-01   p_joint 7.597403e-05

Joint ci ratio: 3.608514e-01	ci left: 6.242761e-05	ci right 9.046476e-05	k: 117	n:1550000
Cons ci ratio: 1.325718e-04	ci left: 9.981635e-01	ci right 9.982965e-01	k: 1547258	n:1550000
KS ci ratio: 9.239472e-01	ci left: 6.389126e-06	ci right 1.756036e-05	k: 17	n:1550000
TROAP   1550000 perm   1249 sec   (1241 perm/sec)   p_kst 1.096774e-05   p_cons 9.982310e-01   p_joint 7.548387e-05

Joint ci ratio: 3.593320e-01	ci left: 6.261046e-05	ci right 9.058363e-05	k: 118	n:1560000
Cons ci ratio: 1.322014e-04	ci left: 9.981623e-01	ci right 9.982949e-01	k: 1557238	n:1560000
KS ci ratio: 9.239472e-01	ci left: 6.348170e-06	ci right 1.744779e-05	k: 17	n:1560000
TROAP   1560000 perm   1263 sec   (1235 perm/sec)   p_kst 1.089744e-05   p_cons 9.982295e-01   p_joint 7.564103e-05

Joint ci ratio: 3.578316e-01	ci left: 6.279124e-05	ci right 9.070075e-05	k: 119	n:1570000
Cons ci ratio: 1.318578e-04	ci left: 9.981603e-01	ci right 9.982926e-01	k: 1567217	n:1570000
KS ci ratio: 9.239473e-01	ci left: 6.307736e-06	ci right 1.733666e-05	k: 17	n:1570000
TROAP   1570000 perm   1277 sec   (1229 perm/sec)   p_kst 1.082803e-05   p_cons 9.982274e-01   p_joint 7.579618e-05

Joint ci ratio: 3.578317e-01	ci left: 6.239382e-05	ci right 9.012670e-05	k: 119	n:1580000
Cons ci ratio: 1.313051e-04	ci left: 9.981643e-01	ci right 9.982959e-01	k: 1577205	n:1580000
KS ci ratio: 9.239473e-01	ci left: 6.267814e-06	ci right 1.722694e-05	k: 17	n:1580000
TROAP   1580000 perm   1291 sec   (1224 perm/sec)   p_kst 1.075949e-05   p_cons 9.982310e-01   p_joint 7.531646e-05

Joint ci ratio: 3.639495e-01	ci left: 5.971375e-05	ci right 8.681703e-05	k: 115	n:1590000
Cons ci ratio: 1.308287e-04	ci left: 9.981662e-01	ci right 9.982974e-01	k: 1587190	n:1590000
KS ci ratio: 9.239473e-01	ci left: 6.228393e-06	ci right 1.711859e-05	k: 17	n:1590000
TROAP   1590000 perm   1305 sec   (1218 perm/sec)   p_kst 1.069182e-05   p_cons 9.982327e-01   p_joint 7.232704e-05

Joint ci ratio: 3.623908e-01	ci left: 5.990851e-05	ci right 8.695622e-05	k: 116	n:1600000
Cons ci ratio: 1.306112e-04	ci left: 9.981611e-01	ci right 9.982921e-01	k: 1597164	n:1600000
KS ci ratio: 9.239474e-01	ci left: 6.189466e-06	ci right 1.701160e-05	k: 17	n:1600000
TROAP   1600000 perm   1319 sec   (1213 perm/sec)   p_kst 1.062500e-05   p_cons 9.982275e-01   p_joint 7.250000e-05

Joint ci ratio: 3.623908e-01	ci left: 5.953641e-05	ci right 8.641612e-05	k: 116	n:1610000
Cons ci ratio: 1.301197e-04	ci left: 9.981637e-01	ci right 9.982942e-01	k: 1607150	n:1610000
KS ci ratio: 9.239474e-01	ci left: 6.151022e-06	ci right 1.690594e-05	k: 17	n:1610000
TROAP   1610000 perm   1334 sec   (1207 perm/sec)   p_kst 1.055901e-05   p_cons 9.982298e-01   p_joint 7.204969e-05

Joint ci ratio: 3.623909e-01	ci left: 5.916890e-05	ci right 8.588269e-05	k: 116	n:1620000
Cons ci ratio: 1.297467e-04	ci left: 9.981631e-01	ci right 9.982932e-01	k: 1617131	n:1620000
KS ci ratio: 9.239474e-01	ci left: 6.113053e-06	ci right 1.680158e-05	k: 17	n:1620000
TROAP   1620000 perm   1349 sec   (1201 perm/sec)   p_kst 1.049383e-05   p_cons 9.982290e-01   p_joint 7.160494e-05

Joint ci ratio: 3.623910e-01	ci left: 5.880589e-05	ci right 8.535581e-05	k: 116	n:1630000
Cons ci ratio: 1.293545e-04	ci left: 9.981631e-01	ci right 9.982928e-01	k: 1627113	n:1630000
KS ci ratio: 9.239475e-01	ci left: 6.075549e-06	ci right 1.669850e-05	k: 17	n:1630000
TROAP   1630000 perm   1366 sec   (1193 perm/sec)   p_kst 1.042945e-05   p_cons 9.982288e-01   p_joint 7.116564e-05

Joint ci ratio: 3.608522e-01	ci left: 5.900168e-05	ci right 8.550027e-05	k: 117	n:1640000
Cons ci ratio: 1.290102e-04	ci left: 9.981619e-01	ci right 9.982912e-01	k: 1637093	n:1640000
KS ci ratio: 9.239475e-01	ci left: 6.038503e-06	ci right 1.659668e-05	k: 17	n:1640000
TROAP   1640000 perm   1381 sec   (1187 perm/sec)   p_kst 1.036585e-05   p_cons 9.982274e-01   p_joint 7.134146e-05

Joint ci ratio: 3.608522e-01	ci left: 5.864409e-05	ci right 8.498209e-05	k: 117	n:1650000
Cons ci ratio: 1.285365e-04	ci left: 9.981644e-01	ci right 9.982933e-01	k: 1647079	n:1650000
KS ci ratio: 9.239475e-01	ci left: 6.001906e-06	ci right 1.649610e-05	k: 17	n:1650000
TROAP   1650000 perm   1396 sec   (1182 perm/sec)   p_kst 1.030303e-05   p_cons 9.982297e-01   p_joint 7.090909e-05

Joint ci ratio: 3.881258e-01	ci left: 4.955819e-05	ci right 7.392973e-05	k: 101	n:1660000
Cons ci ratio: 1.281551e-04	ci left: 9.981644e-01	ci right 9.982929e-01	k: 1657061	n:1660000
KS ci ratio: 8.993043e-01	ci left: 6.426483e-06	ci right 1.713715e-05	k: 18	n:1660000
TROAP   1660000 perm   1412 sec   (1176 perm/sec)   p_kst 1.084337e-05   p_cons 9.982295e-01   p_joint 6.084337e-05

Joint ci ratio: 3.919881e-01	ci left: 4.818128e-05	ci right 7.217256e-05	k: 99	n:1670000
Cons ci ratio: 1.277122e-04	ci left: 9.981662e-01	ci right 9.982943e-01	k: 1667046	n:1670000
KS ci ratio: 8.993043e-01	ci left: 6.388001e-06	ci right 1.703453e-05	k: 18	n:1670000
TROAP   1670000 perm   1426 sec   (1171 perm/sec)   p_kst 1.077844e-05   p_cons 9.982311e-01   p_joint 5.928144e-05

Joint ci ratio: 3.919882e-01	ci left: 4.789449e-05	ci right 7.174296e-05	k: 99	n:1680000
Cons ci ratio: 1.275310e-04	ci left: 9.981608e-01	ci right 9.982887e-01	k: 1677019	n:1680000
KS ci ratio: 8.993043e-01	ci left: 6.349977e-06	ci right 1.693314e-05	k: 18	n:1680000
TROAP   1680000 perm   1442 sec   (1165 perm/sec)   p_kst 1.071429e-05   p_cons 9.982256e-01   p_joint 5.892857e-05

Joint ci ratio: 3.919883e-01	ci left: 4.761108e-05	ci right 7.131845e-05	k: 99	n:1690000
Cons ci ratio: 1.273070e-04	ci left: 9.981566e-01	ci right 9.982843e-01	k: 1686994	n:1690000
KS ci ratio: 8.993044e-01	ci left: 6.312403e-06	ci right 1.683294e-05	k: 18	n:1690000
TROAP   1690000 perm   1457 sec   (1160 perm/sec)   p_kst 1.065089e-05   p_cons 9.982213e-01   p_joint 5.857988e-05

Joint ci ratio: 3.919884e-01	ci left: 4.733102e-05	ci right 7.089893e-05	k: 99	n:1700000
Cons ci ratio: 1.267681e-04	ci left: 9.981615e-01	ci right 9.982886e-01	k: 1696984	n:1700000
KS ci ratio: 8.993044e-01	ci left: 6.275271e-06	ci right 1.673393e-05	k: 18	n:1700000
TROAP   1700000 perm   1472 sec   (1155 perm/sec)   p_kst 1.058824e-05   p_cons 9.982259e-01   p_joint 5.823529e-05

Joint ci ratio: 3.919884e-01	ci left: 4.705423e-05	ci right 7.048432e-05	k: 99	n:1710000
Cons ci ratio: 1.264647e-04	ci left: 9.981597e-01	ci right 9.982865e-01	k: 1706963	n:1710000
KS ci ratio: 8.993044e-01	ci left: 6.238573e-06	ci right 1.663607e-05	k: 18	n:1710000
TROAP   1710000 perm   1488 sec   (1149 perm/sec)   p_kst 1.052632e-05   p_cons 9.982240e-01   p_joint 5.789474e-05

Joint ci ratio: 3.919885e-01	ci left: 4.678065e-05	ci right 7.007453e-05	k: 99	n:1720000
Cons ci ratio: 1.261220e-04	ci left: 9.981592e-01	ci right 9.982856e-01	k: 1716944	n:1720000
KS ci ratio: 8.993044e-01	ci left: 6.202303e-06	ci right 1.653935e-05	k: 18	n:1720000
TROAP   1720000 perm   1503 sec   (1144 perm/sec)   p_kst 1.046512e-05   p_cons 9.982233e-01   p_joint 5.755814e-05

Joint ci ratio: 3.919886e-01	ci left: 4.651024e-05	ci right 6.966948e-05	k: 99	n:1730000
Cons ci ratio: 1.256592e-04	ci left: 9.981622e-01	ci right 9.982882e-01	k: 1726931	n:1730000
KS ci ratio: 8.993045e-01	ci left: 6.166451e-06	ci right 1.644374e-05	k: 18	n:1730000
TROAP   1730000 perm   1519 sec   (1139 perm/sec)   p_kst 1.040462e-05   p_cons 9.982260e-01   p_joint 5.722543e-05

Joint ci ratio: 3.939635e-01	ci left: 4.572502e-05	ci right 6.863786e-05	k: 98	n:1740000
Cons ci ratio: 1.253840e-04	ci left: 9.981599e-01	ci right 9.982856e-01	k: 1736909	n:1740000
KS ci ratio: 8.993045e-01	ci left: 6.131012e-06	ci right 1.634924e-05	k: 18	n:1740000
TROAP   1740000 perm   1534 sec   (1134 perm/sec)   p_kst 1.034483e-05   p_cons 9.982236e-01   p_joint 5.632184e-05

Joint ci ratio: 3.919887e-01	ci left: 4.597870e-05	ci right 6.887326e-05	k: 99	n:1750000
Cons ci ratio: 1.250097e-04	ci left: 9.981605e-01	ci right 9.982858e-01	k: 1746892	n:1750000
KS ci ratio: 8.993045e-01	ci left: 6.095977e-06	ci right 1.625581e-05	k: 18	n:1750000
TROAP   1750000 perm   1550 sec   (1129 perm/sec)   p_kst 1.028571e-05   p_cons 9.982240e-01   p_joint 5.657143e-05

Joint ci ratio: 3.919888e-01	ci left: 4.571745e-05	ci right 6.848194e-05	k: 99	n:1760000
Cons ci ratio: 1.246188e-04	ci left: 9.981617e-01	ci right 9.982867e-01	k: 1756876	n:1760000
KS ci ratio: 8.993046e-01	ci left: 6.061341e-06	ci right 1.616345e-05	k: 18	n:1760000
TROAP   1760000 perm   1566 sec   (1124 perm/sec)   p_kst 1.022727e-05   p_cons 9.982250e-01   p_joint 5.625000e-05

Joint ci ratio: 3.919888e-01	ci left: 4.545916e-05	ci right 6.809504e-05	k: 99	n:1770000
Cons ci ratio: 1.242513e-04	ci left: 9.981623e-01	ci right 9.982869e-01	k: 1766859	n:1770000
KS ci ratio: 8.993046e-01	ci left: 6.027096e-06	ci right 1.607213e-05	k: 18	n:1770000
TROAP   1770000 perm   1581 sec   (1120 perm/sec)   p_kst 1.016949e-05   p_cons 9.982254e-01   p_joint 5.593220e-05

Joint ci ratio: 3.862378e-01	ci left: 4.672428e-05	ci right 6.956196e-05	k: 102	n:1780000
Cons ci ratio: 1.239460e-04	ci left: 9.981612e-01	ci right 9.982855e-01	k: 1776839	n:1780000
KS ci ratio: 8.993046e-01	ci left: 5.993236e-06	ci right 1.598184e-05	k: 18	n:1780000
TROAP   1780000 perm   1596 sec   (1115 perm/sec)   p_kst 1.011236e-05   p_cons 9.982242e-01   p_joint 5.730337e-05

Joint ci ratio: 3.825415e-01	ci left: 4.747261e-05	ci right 7.039812e-05	k: 104	n:1790000
Cons ci ratio: 1.235649e-04	ci left: 9.981624e-01	ci right 9.982863e-01	k: 1786823	n:1790000
KS ci ratio: 8.554089e-01	ci left: 6.824884e-06	ci right 1.725602e-05	k: 20	n:1790000
TROAP   1790000 perm   1611 sec   (1111 perm/sec)   p_kst 1.117318e-05   p_cons 9.982251e-01   p_joint 5.810056e-05

Joint ci ratio: 3.807327e-01	ci left: 4.771113e-05	ci right 7.061562e-05	k: 105	n:1800000
Cons ci ratio: 1.232839e-04	ci left: 9.981607e-01	ci right 9.982843e-01	k: 1796802	n:1800000
KS ci ratio: 8.554089e-01	ci left: 6.786968e-06	ci right 1.716016e-05	k: 20	n:1800000
TROAP   1800000 perm   1626 sec   (1107 perm/sec)   p_kst 1.111111e-05   p_cons 9.982233e-01   p_joint 5.833333e-05

Joint ci ratio: 3.807328e-01	ci left: 4.744753e-05	ci right 7.022548e-05	k: 105	n:1810000
Cons ci ratio: 1.228131e-04	ci left: 9.981647e-01	ci right 9.982878e-01	k: 1806791	n:1810000
KS ci ratio: 8.554089e-01	ci left: 6.749471e-06	ci right 1.706535e-05	k: 20	n:1810000
TROAP   1810000 perm   1642 sec   (1103 perm/sec)   p_kst 1.104972e-05   p_cons 9.982271e-01   p_joint 5.801105e-05

Joint ci ratio: 3.754566e-01	ci left: 4.867854e-05	ci right 7.164391e-05	k: 108	n:1820000
Cons ci ratio: 1.225753e-04	ci left: 9.981619e-01	ci right 9.982848e-01	k: 1816768	n:1820000
KS ci ratio: 8.357415e-01	ci left: 7.142503e-06	ci right 1.763771e-05	k: 21	n:1820000
TROAP   1820000 perm   1657 sec   (1099 perm/sec)   p_kst 1.153846e-05   p_cons 9.982242e-01   p_joint 5.934066e-05

Joint ci ratio: 3.919892e-01	ci left: 4.396869e-05	ci right 6.586243e-05	k: 99	n:1830000
Cons ci ratio: 1.223009e-04	ci left: 9.981603e-01	ci right 9.982829e-01	k: 1826747	n:1830000
KS ci ratio: 8.357416e-01	ci left: 7.103473e-06	ci right 1.754133e-05	k: 21	n:1830000
TROAP   1830000 perm   1672 sec   (1094 perm/sec)   p_kst 1.147541e-05   p_cons 9.982224e-01   p_joint 5.409836e-05

Joint ci ratio: 3.900438e-01	ci left: 4.421977e-05	ci right 6.610113e-05	k: 100	n:1840000
Cons ci ratio: 1.218601e-04	ci left: 9.981637e-01	ci right 9.982858e-01	k: 1836735	n:1840000
KS ci ratio: 8.357416e-01	ci left: 7.064867e-06	ci right 1.744600e-05	k: 21	n:1840000
TROAP   1840000 perm   1688 sec   (1090 perm/sec)   p_kst 1.141304e-05   p_cons 9.982255e-01   p_joint 5.434783e-05

Joint ci ratio: 3.900438e-01	ci left: 4.398075e-05	ci right 6.574383e-05	k: 100	n:1850000
Cons ci ratio: 1.215164e-04	ci left: 9.981642e-01	ci right 9.982861e-01	k: 1846718	n:1850000
KS ci ratio: 8.357416e-01	ci left: 7.026679e-06	ci right 1.735169e-05	k: 21	n:1850000
TROAP   1850000 perm   1703 sec   (1086 perm/sec)   p_kst 1.135135e-05   p_cons 9.982259e-01   p_joint 5.405405e-05

Joint ci ratio: 3.900439e-01	ci left: 4.374429e-05	ci right 6.539037e-05	k: 100	n:1860000
Cons ci ratio: 1.213226e-04	ci left: 9.981604e-01	ci right 9.982821e-01	k: 1856693	n:1860000
KS ci ratio: 8.357416e-01	ci left: 6.988901e-06	ci right 1.725841e-05	k: 21	n:1860000
TROAP   1860000 perm   1720 sec   (1082 perm/sec)   p_kst 1.129032e-05   p_cons 9.982220e-01   p_joint 5.376344e-05

Joint ci ratio: 3.881271e-01	ci left: 4.399281e-05	ci right 6.562751e-05	k: 101	n:1870000
Cons ci ratio: 1.209653e-04	ci left: 9.981616e-01	ci right 9.982829e-01	k: 1866677	n:1870000
KS ci ratio: 8.173713e-01	ci left: 7.372893e-06	ci right 1.781185e-05	k: 22	n:1870000
TROAP   1870000 perm   1736 sec   (1077 perm/sec)   p_kst 1.176471e-05   p_cons 9.982230e-01   p_joint 5.401070e-05

Joint ci ratio: 3.959694e-01	ci left: 4.184087e-05	ci right 6.294208e-05	k: 97	n:1880000
Cons ci ratio: 1.207195e-04	ci left: 9.981595e-01	ci right 9.982805e-01	k: 1876655	n:1880000
KS ci ratio: 8.173713e-01	ci left: 7.333675e-06	ci right 1.771711e-05	k: 22	n:1880000
TROAP   1880000 perm   1753 sec   (1073 perm/sec)   p_kst 1.170213e-05   p_cons 9.982207e-01   p_joint 5.159574e-05

Joint ci ratio: 3.959694e-01	ci left: 4.161948e-05	ci right 6.260905e-05	k: 97	n:1890000
Cons ci ratio: 1.205467e-04	ci left: 9.981552e-01	ci right 9.982761e-01	k: 1886629	n:1890000
KS ci ratio: 8.173713e-01	ci left: 7.294873e-06	ci right 1.762337e-05	k: 22	n:1890000
TROAP   1890000 perm   1770 sec   (1068 perm/sec)   p_kst 1.164021e-05   p_cons 9.982164e-01   p_joint 5.132275e-05

Joint ci ratio: 3.939645e-01	ci left: 4.187447e-05	ci right 6.285786e-05	k: 98	n:1900000
Cons ci ratio: 1.201252e-04	ci left: 9.981585e-01	ci right 9.982789e-01	k: 1896617	n:1900000
KS ci ratio: 8.173713e-01	ci left: 7.256478e-06	ci right 1.753061e-05	k: 22	n:1900000
TROAP   1900000 perm   1786 sec   (1064 perm/sec)   p_kst 1.157895e-05   p_cons 9.982195e-01   p_joint 5.157895e-05

Joint ci ratio: 3.959695e-01	ci left: 4.118368e-05	ci right 6.195346e-05	k: 97	n:1910000
Cons ci ratio: 1.197431e-04	ci left: 9.981607e-01	ci right 9.982807e-01	k: 1906603	n:1910000
KS ci ratio: 8.173714e-01	ci left: 7.218486e-06	ci right 1.743883e-05	k: 22	n:1910000
TROAP   1910000 perm   1802 sec   (1060 perm/sec)   p_kst 1.151832e-05   p_cons 9.982215e-01   p_joint 5.078534e-05

Joint ci ratio: 2.540800e-01	ci left: 1.082220e-04	ci right 1.401929e-04	k: 237	n:1920000
Cons ci ratio: 1.194695e-04	ci left: 9.981597e-01	ci right 9.982794e-01	k: 1916583	n:1920000
KS ci ratio: 7.839947e-01	ci left: 8.009002e-06	ci right 1.859895e-05	k: 24	n:1920000
TROAP   1920000 perm   1819 sec   (1055 perm/sec)   p_kst 1.250000e-05   p_cons 9.982203e-01   p_joint 1.234375e-04

Joint ci ratio: 2.535480e-01	ci left: 1.081465e-04	ci right 1.400175e-04	k: 238	n:1930000
Cons ci ratio: 1.192152e-04	ci left: 9.981581e-01	ci right 9.982777e-01	k: 1926562	n:1930000
KS ci ratio: 7.839947e-01	ci left: 7.967504e-06	ci right 1.850259e-05	k: 24	n:1930000
TROAP   1930000 perm   1836 sec   (1051 perm/sec)   p_kst 1.243523e-05   p_cons 9.982187e-01   p_joint 1.233161e-04

Joint ci ratio: 2.535480e-01	ci left: 1.075890e-04	ci right 1.392958e-04	k: 238	n:1940000
Cons ci ratio: 1.188934e-04	ci left: 9.981587e-01	ci right 9.982779e-01	k: 1936545	n:1940000
KS ci ratio: 7.839947e-01	ci left: 7.926435e-06	ci right 1.840721e-05	k: 24	n:1940000
TROAP   1940000 perm   1853 sec   (1047 perm/sec)   p_kst 1.237113e-05   p_cons 9.982191e-01   p_joint 1.226804e-04

Joint ci ratio: 2.530193e-01	ci left: 1.075175e-04	ci right 1.391268e-04	k: 239	n:1950000
Cons ci ratio: 1.185058e-04	ci left: 9.981614e-01	ci right 9.982802e-01	k: 1946532	n:1950000
KS ci ratio: 7.839948e-01	ci left: 7.885786e-06	ci right 1.831282e-05	k: 24	n:1950000
TROAP   1950000 perm   1870 sec   (1043 perm/sec)   p_kst 1.230769e-05   p_cons 9.982215e-01   p_joint 1.225641e-04

Joint ci ratio: 2.530194e-01	ci left: 1.069690e-04	ci right 1.384169e-04	k: 239	n:1960000
Cons ci ratio: 1.182916e-04	ci left: 9.981588e-01	ci right 9.982774e-01	k: 1956509	n:1960000
KS ci ratio: 7.839948e-01	ci left: 7.845552e-06	ci right 1.821938e-05	k: 24	n:1960000
TROAP   1960000 perm   1886 sec   (1039 perm/sec)   p_kst 1.224490e-05   p_cons 9.982189e-01   p_joint 1.219388e-04

Joint ci ratio: 2.524939e-01	ci left: 1.069014e-04	ci right 1.382540e-04	k: 240	n:1970000
Cons ci ratio: 1.179435e-04	ci left: 9.981605e-01	ci right 9.982787e-01	k: 1966494	n:1970000
KS ci ratio: 7.839948e-01	ci left: 7.805727e-06	ci right 1.812690e-05	k: 24	n:1970000
TROAP   1970000 perm   1902 sec   (1036 perm/sec)   p_kst 1.218274e-05   p_cons 9.982203e-01   p_joint 1.218274e-04

Joint ci ratio: 2.524940e-01	ci left: 1.063615e-04	ci right 1.375558e-04	k: 240	n:1980000
Cons ci ratio: 1.176319e-04	ci left: 9.981610e-01	ci right 9.982789e-01	k: 1976477	n:1980000
KS ci ratio: 7.839949e-01	ci left: 7.766304e-06	ci right 1.803535e-05	k: 24	n:1980000
TROAP   1980000 perm   1919 sec   (1032 perm/sec)   p_kst 1.212121e-05   p_cons 9.982207e-01   p_joint 1.212121e-04

Joint ci ratio: 2.509368e-01	ci left: 1.072395e-04	ci right 1.384670e-04	k: 243	n:1990000
Cons ci ratio: 1.174223e-04	ci left: 9.981585e-01	ci right 9.982762e-01	k: 1986454	n:1990000
KS ci ratio: 7.839949e-01	ci left: 7.727278e-06	ci right 1.794472e-05	k: 24	n:1990000
TROAP   1990000 perm   1936 sec   (1028 perm/sec)   p_kst 1.206030e-05   p_cons 9.982181e-01   p_joint 1.221106e-04

Joint ci ratio: 2.504242e-01	ci left: 1.071719e-04	ci right 1.383060e-04	k: 244	n:2000000
Cons ci ratio: 1.171641e-04	ci left: 9.981576e-01	ci right 9.982750e-01	k: 1996434	n:2000000
KS ci ratio: 7.839949e-01	ci left: 7.688641e-06	ci right 1.785500e-05	k: 24	n:2000000
TROAP   2000000 perm   1952 sec   (1024 perm/sec)   p_kst 1.200000e-05   p_cons 9.982170e-01   p_joint 1.220000e-04

Joint ci ratio: 2.499147e-01	ci left: 1.071050e-04	ci right 1.381465e-04	k: 245	n:2010000
Cons ci ratio: 1.168750e-04	ci left: 9.981576e-01	ci right 9.982748e-01	k: 2006416	n:2010000
KS ci ratio: 7.839949e-01	ci left: 7.650389e-06	ci right 1.776617e-05	k: 24	n:2010000
TROAP   2010000 perm   1969 sec   (1021 perm/sec)   p_kst 1.194030e-05   p_cons 9.982169e-01   p_joint 1.218905e-04

Joint ci ratio: 2.494083e-01	ci left: 1.070389e-04	ci right 1.379886e-04	k: 246	n:2020000
Cons ci ratio: 1.165556e-04	ci left: 9.981587e-01	ci right 9.982755e-01	k: 2016400	n:2020000
KS ci ratio: 7.839950e-01	ci left: 7.612516e-06	ci right 1.767821e-05	k: 24	n:2020000
TROAP   2020000 perm   1986 sec   (1017 perm/sec)   p_kst 1.188119e-05   p_cons 9.982178e-01   p_joint 1.217822e-04

Joint ci ratio: 2.551554e-01	ci left: 1.014354e-04	ci right 1.315483e-04	k: 235	n:2030000
Cons ci ratio: 1.162710e-04	ci left: 9.981587e-01	ci right 9.982753e-01	k: 2026382	n:2030000
KS ci ratio: 7.839950e-01	ci left: 7.575016e-06	ci right 1.759113e-05	k: 24	n:2030000
TROAP   2030000 perm   2003 sec   (1013 perm/sec)   p_kst 1.182266e-05   p_cons 9.982177e-01   p_joint 1.157635e-04

Joint ci ratio: 2.546165e-01	ci left: 1.013970e-04	ci right 1.314249e-04	k: 236	n:2040000
Cons ci ratio: 1.159884e-04	ci left: 9.981588e-01	ci right 9.982751e-01	k: 2036364	n:2040000
KS ci ratio: 7.839950e-01	ci left: 7.537883e-06	ci right 1.750490e-05	k: 24	n:2040000
TROAP   2040000 perm   2020 sec   (1010 perm/sec)   p_kst 1.176471e-05   p_cons 9.982176e-01   p_joint 1.156863e-04

Joint ci ratio: 2.530200e-01	ci left: 1.022727e-04	ci right 1.323401e-04	k: 239	n:2050000
Cons ci ratio: 1.156920e-04	ci left: 9.981594e-01	ci right 9.982753e-01	k: 2046347	n:2050000
KS ci ratio: 7.543992e-01	ci left: 8.284925e-06	ci right 1.858337e-05	k: 26	n:2050000
TROAP   2050000 perm   2037 sec   (1006 perm/sec)   p_kst 1.268293e-05   p_cons 9.982180e-01   p_joint 1.165854e-04

Joint ci ratio: 2.519723e-01	ci left: 1.026857e-04	ci right 1.327299e-04	k: 241	n:2060000
Cons ci ratio: 1.154136e-04	ci left: 9.981594e-01	ci right 9.982751e-01	k: 2056329	n:2060000
KS ci ratio: 7.408052e-01	ci left: 8.637478e-06	ci right 1.906964e-05	k: 27	n:2060000
TROAP   2060000 perm   2054 sec   (1003 perm/sec)   p_kst 1.310680e-05   p_cons 9.982180e-01   p_joint 1.169903e-04

Joint ci ratio: 2.509374e-01	ci left: 1.030950e-04	ci right 1.331156e-04	k: 243	n:2070000
Cons ci ratio: 1.151372e-04	ci left: 9.981595e-01	ci right 9.982749e-01	k: 2066311	n:2070000
KS ci ratio: 7.279205e-01	ci left: 8.988326e-06	ci right 1.954960e-05	k: 28	n:2070000
TROAP   2070000 perm   2072 sec   (999 perm/sec)   p_kst 1.352657e-05   p_cons 9.982179e-01   p_joint 1.173913e-04

Joint ci ratio: 2.499152e-01	ci left: 1.035005e-04	ci right 1.334974e-04	k: 245	n:2080000
Cons ci ratio: 1.149869e-04	ci left: 9.981556e-01	ci right 9.982709e-01	k: 2076285	n:2080000
KS ci ratio: 7.279205e-01	ci left: 8.945113e-06	ci right 1.945561e-05	k: 28	n:2080000
TROAP   2080000 perm   2089 sec   (996 perm/sec)   p_kst 1.346154e-05   p_cons 9.982139e-01   p_joint 1.177885e-04

Joint ci ratio: 2.494088e-01	ci left: 1.034538e-04	ci right 1.333670e-04	k: 246	n:2090000
Cons ci ratio: 1.146212e-04	ci left: 9.981586e-01	ci right 9.982735e-01	k: 2086273	n:2090000
KS ci ratio: 7.279205e-01	ci left: 8.902313e-06	ci right 1.936252e-05	k: 28	n:2090000
TROAP   2090000 perm   2107 sec   (992 perm/sec)   p_kst 1.339713e-05   p_cons 9.982167e-01   p_joint 1.177033e-04

Joint ci ratio: 2.489055e-01	ci left: 1.034076e-04	ci right 1.332378e-04	k: 247	n:2100000
Cons ci ratio: 1.143351e-04	ci left: 9.981592e-01	ci right 9.982737e-01	k: 2096256	n:2100000
KS ci ratio: 7.279205e-01	ci left: 8.859921e-06	ci right 1.927032e-05	k: 28	n:2100000
TROAP   2100000 perm   2124 sec   (989 perm/sec)   p_kst 1.333333e-05   p_cons 9.982171e-01   p_joint 1.176190e-04

Joint ci ratio: 2.494090e-01	ci left: 1.024732e-04	ci right 1.321029e-04	k: 246	n:2110000
Cons ci ratio: 1.140816e-04	ci left: 9.981587e-01	ci right 9.982731e-01	k: 2106237	n:2110000
KS ci ratio: 7.279206e-01	ci left: 8.817931e-06	ci right 1.917899e-05	k: 28	n:2110000
TROAP   2110000 perm   2142 sec   (985 perm/sec)   p_kst 1.327014e-05   p_cons 9.982166e-01   p_joint 1.165877e-04

Joint ci ratio: 2.494090e-01	ci left: 1.019898e-04	ci right 1.314797e-04	k: 246	n:2120000
Cons ci ratio: 1.137091e-04	ci left: 9.981621e-01	ci right 9.982761e-01	k: 2116226	n:2120000
KS ci ratio: 7.279206e-01	ci left: 8.776337e-06	ci right 1.908853e-05	k: 28	n:2120000
TROAP   2120000 perm   2159 sec   (982 perm/sec)   p_kst 1.320755e-05   p_cons 9.982198e-01   p_joint 1.160377e-04

Joint ci ratio: 2.489057e-01	ci left: 1.019512e-04	ci right 1.313612e-04	k: 247	n:2130000
Cons ci ratio: 1.134597e-04	ci left: 9.981617e-01	ci right 9.982754e-01	k: 2126207	n:2130000
KS ci ratio: 7.279206e-01	ci left: 8.735133e-06	ci right 1.899891e-05	k: 28	n:2130000
TROAP   2130000 perm   2177 sec   (978 perm/sec)   p_kst 1.314554e-05   p_cons 9.982192e-01   p_joint 1.159624e-04

Joint ci ratio: 2.489058e-01	ci left: 1.014748e-04	ci right 1.307474e-04	k: 247	n:2140000
Cons ci ratio: 1.132566e-04	ci left: 9.981599e-01	ci right 9.982734e-01	k: 2136185	n:2140000
KS ci ratio: 7.279206e-01	ci left: 8.694315e-06	ci right 1.891013e-05	k: 28	n:2140000
TROAP   2140000 perm   2195 sec   (975 perm/sec)   p_kst 1.308411e-05   p_cons 9.982173e-01   p_joint 1.154206e-04

Joint ci ratio: 2.489058e-01	ci left: 1.010028e-04	ci right 1.301392e-04	k: 247	n:2150000
Cons ci ratio: 1.129363e-04	ci left: 9.981618e-01	ci right 9.982750e-01	k: 2146171	n:2150000
KS ci ratio: 7.279206e-01	ci left: 8.653876e-06	ci right 1.882218e-05	k: 28	n:2150000
TROAP   2150000 perm   2212 sec   (972 perm/sec)   p_kst 1.302326e-05   p_cons 9.982191e-01   p_joint 1.148837e-04

Joint ci ratio: 2.479082e-01	ci left: 1.014035e-04	ci right 1.305202e-04	k: 249	n:2160000
Cons ci ratio: 1.126040e-04	ci left: 9.981642e-01	ci right 9.982771e-01	k: 2156158	n:2160000
KS ci ratio: 7.279207e-01	ci left: 8.613811e-06	ci right 1.873504e-05	k: 28	n:2160000
TROAP   2160000 perm   2230 sec   (969 perm/sec)   p_kst 1.296296e-05   p_cons 9.982213e-01   p_joint 1.152778e-04

Joint ci ratio: 2.464339e-01	ci left: 1.022331e-04	ci right 1.313867e-04	k: 252	n:2170000
Cons ci ratio: 1.123618e-04	ci left: 9.981638e-01	ci right 9.982764e-01	k: 2166139	n:2170000
KS ci ratio: 7.279207e-01	ci left: 8.574116e-06	ci right 1.864870e-05	k: 28	n:2170000
TROAP   2170000 perm   2248 sec   (965 perm/sec)   p_kst 1.290323e-05   p_cons 9.982207e-01   p_joint 1.161290e-04

Joint ci ratio: 2.459483e-01	ci left: 1.021945e-04	ci right 1.312709e-04	k: 253	n:2180000
Cons ci ratio: 1.121357e-04	ci left: 9.981629e-01	ci right 9.982753e-01	k: 2176119	n:2180000
KS ci ratio: 7.279207e-01	ci left: 8.534786e-06	ci right 1.856316e-05	k: 28	n:2180000
TROAP   2180000 perm   2266 sec   (962 perm/sec)   p_kst 1.284404e-05   p_cons 9.982197e-01   p_joint 1.160550e-04

Joint ci ratio: 2.454656e-01	ci left: 1.021564e-04	ci right 1.311562e-04	k: 254	n:2190000
Cons ci ratio: 1.119253e-04	ci left: 9.981615e-01	ci right 9.982737e-01	k: 2186098	n:2190000
KS ci ratio: 7.279207e-01	ci left: 8.495814e-06	ci right 1.847839e-05	k: 28	n:2190000
TROAP   2190000 perm   2284 sec   (959 perm/sec)   p_kst 1.278539e-05   p_cons 9.982183e-01   p_joint 1.159817e-04

Joint ci ratio: 2.449857e-01	ci left: 1.021186e-04	ci right 1.310424e-04	k: 255	n:2200000
Cons ci ratio: 1.118014e-04	ci left: 9.981574e-01	ci right 9.982695e-01	k: 2196071	n:2200000
KS ci ratio: 7.279208e-01	ci left: 8.457196e-06	ci right 1.839440e-05	k: 28	n:2200000
TROAP   2200000 perm   2302 sec   (956 perm/sec)   p_kst 1.272727e-05   p_cons 9.982141e-01   p_joint 1.159091e-04

Joint ci ratio: 2.440342e-01	ci left: 1.025061e-04	ci right 1.314098e-04	k: 257	n:2210000
Cons ci ratio: 1.115926e-04	ci left: 9.981561e-01	ci right 9.982679e-01	k: 2206050	n:2210000
KS ci ratio: 7.279208e-01	ci left: 8.418929e-06	ci right 1.831117e-05	k: 28	n:2210000
TROAP   2210000 perm   2321 sec   (952 perm/sec)   p_kst 1.266968e-05   p_cons 9.982127e-01   p_joint 1.162896e-04

Joint ci ratio: 2.440343e-01	ci left: 1.020444e-04	ci right 1.308179e-04	k: 257	n:2220000
Cons ci ratio: 1.112865e-04	ci left: 9.981580e-01	ci right 9.982695e-01	k: 2216036	n:2220000
KS ci ratio: 7.279208e-01	ci left: 8.381005e-06	ci right 1.822869e-05	k: 28	n:2220000
TROAP   2220000 perm   2339 sec   (949 perm/sec)   p_kst 1.261261e-05   p_cons 9.982144e-01   p_joint 1.157658e-04

Joint ci ratio: 2.440344e-01	ci left: 1.015868e-04	ci right 1.302313e-04	k: 257	n:2230000
Cons ci ratio: 1.109967e-04	ci left: 9.981594e-01	ci right 9.982707e-01	k: 2226021	n:2230000
KS ci ratio: 7.279208e-01	ci left: 8.343422e-06	ci right 1.814694e-05	k: 28	n:2230000
TROAP   2230000 perm   2357 sec   (946 perm/sec)   p_kst 1.255605e-05   p_cons 9.982157e-01   p_joint 1.152466e-04

Joint ci ratio: 2.430939e-01	ci left: 1.019716e-04	ci right 1.305971e-04	k: 259	n:2240000
Cons ci ratio: 1.107230e-04	ci left: 9.981604e-01	ci right 9.982714e-01	k: 2236005	n:2240000
KS ci ratio: 7.279209e-01	ci left: 8.306175e-06	ci right 1.806593e-05	k: 28	n:2240000
TROAP   2240000 perm   2375 sec   (943 perm/sec)   p_kst 1.250000e-05   p_cons 9.982165e-01   p_joint 1.156250e-04

Joint ci ratio: 2.426278e-01	ci left: 1.019358e-04	ci right 1.304881e-04	k: 260	n:2250000
Cons ci ratio: 1.104927e-04	ci left: 9.981600e-01	ci right 9.982707e-01	k: 2245986	n:2250000
KS ci ratio: 7.279209e-01	ci left: 8.269258e-06	ci right 1.798564e-05	k: 28	n:2250000
TROAP   2250000 perm   2394 sec   (940 perm/sec)   p_kst 1.244444e-05   p_cons 9.982160e-01   p_joint 1.155556e-04

Joint ci ratio: 2.421643e-01	ci left: 1.019004e-04	ci right 1.303800e-04	k: 261	n:2260000
Cons ci ratio: 1.103186e-04	ci left: 9.981578e-01	ci right 9.982684e-01	k: 2255963	n:2260000
KS ci ratio: 7.279209e-01	ci left: 8.232669e-06	ci right 1.790606e-05	k: 28	n:2260000
TROAP   2260000 perm   2413 sec   (937 perm/sec)   p_kst 1.238938e-05   p_cons 9.982137e-01   p_joint 1.154867e-04

Joint ci ratio: 2.412452e-01	ci left: 1.022792e-04	ci right 1.307400e-04	k: 263	n:2270000
Cons ci ratio: 1.099955e-04	ci left: 9.981605e-01	ci right 9.982708e-01	k: 2265951	n:2270000
KS ci ratio: 7.156859e-01	ci left: 8.555855e-06	ci right 1.834745e-05	k: 29	n:2270000
TROAP   2270000 perm   2431 sec   (934 perm/sec)   p_kst 1.277533e-05   p_cons 9.982163e-01   p_joint 1.158590e-04

Joint ci ratio: 2.412453e-01	ci left: 1.018306e-04	ci right 1.301666e-04	k: 263	n:2280000
Cons ci ratio: 1.097021e-04	ci left: 9.981624e-01	ci right 9.982723e-01	k: 2275937	n:2280000
KS ci ratio: 7.156859e-01	ci left: 8.518330e-06	ci right 1.826698e-05	k: 29	n:2280000
TROAP   2280000 perm   2450 sec   (931 perm/sec)   p_kst 1.271930e-05   p_cons 9.982180e-01   p_joint 1.153509e-04

Joint ci ratio: 2.398861e-01	ci left: 1.026170e-04	ci right 1.309870e-04	k: 266	n:2290000
Cons ci ratio: 1.095184e-04	ci left: 9.981606e-01	ci right 9.982704e-01	k: 2285915	n:2290000
KS ci ratio: 7.156860e-01	ci left: 8.481132e-06	ci right 1.818722e-05	k: 29	n:2290000
TROAP   2290000 perm   2469 sec   (927 perm/sec)   p_kst 1.266376e-05   p_cons 9.982162e-01   p_joint 1.161572e-04

Joint ci ratio: 2.394381e-01	ci left: 1.025795e-04	ci right 1.308783e-04	k: 267	n:2300000
Cons ci ratio: 1.093755e-04	ci left: 9.981576e-01	ci right 9.982672e-01	k: 2295890	n:2300000
KS ci ratio: 7.156860e-01	ci left: 8.444257e-06	ci right 1.810814e-05	k: 29	n:2300000
TROAP   2300000 perm   2488 sec   (924 perm/sec)   p_kst 1.260870e-05   p_cons 9.982130e-01   p_joint 1.160870e-04

Joint ci ratio: 2.389926e-01	ci left: 1.025424e-04	ci right 1.307706e-04	k: 268	n:2310000
Cons ci ratio: 1.091931e-04	ci left: 9.981559e-01	ci right 9.982653e-01	k: 2305868	n:2310000
KS ci ratio: 7.156860e-01	ci left: 8.407702e-06	ci right 1.802975e-05	k: 29	n:2310000
TROAP   2310000 perm   2508 sec   (921 perm/sec)   p_kst 1.255411e-05   p_cons 9.982113e-01   p_joint 1.160173e-04

Joint ci ratio: 2.381091e-01	ci left: 1.029110e-04	ci right 1.311204e-04	k: 270	n:2320000
Cons ci ratio: 1.089326e-04	ci left: 9.981569e-01	ci right 9.982660e-01	k: 2315852	n:2320000
KS ci ratio: 7.156860e-01	ci left: 8.371462e-06	ci right 1.795204e-05	k: 29	n:2320000
TROAP   2320000 perm   2527 sec   (918 perm/sec)   p_kst 1.250000e-05   p_cons 9.982121e-01   p_joint 1.163793e-04

Joint ci ratio: 2.372352e-01	ci left: 1.032765e-04	ci right 1.314670e-04	k: 272	n:2330000
Cons ci ratio: 1.087263e-04	ci left: 9.981561e-01	ci right 9.982650e-01	k: 2325832	n:2330000
KS ci ratio: 7.040479e-01	ci left: 8.687087e-06	ci right 1.838058e-05	k: 30	n:2330000
TROAP   2330000 perm   2546 sec   (915 perm/sec)   p_kst 1.287554e-05   p_cons 9.982112e-01   p_joint 1.167382e-04

Joint ci ratio: 2.363710e-01	ci left: 1.036392e-04	ci right 1.318105e-04	k: 274	n:2340000
Cons ci ratio: 1.084172e-04	ci left: 9.981587e-01	ci right 9.982674e-01	k: 2335820	n:2340000
KS ci ratio: 6.929598e-01	ci left: 9.001298e-06	ci right 1.880423e-05	k: 31	n:2340000
TROAP   2340000 perm   2565 sec   (912 perm/sec)   p_kst 1.324786e-05   p_cons 9.982137e-01   p_joint 1.170940e-04

Joint ci ratio: 2.355160e-01	ci left: 1.039989e-04	ci right 1.321509e-04	k: 276	n:2350000
Cons ci ratio: 1.081105e-04	ci left: 9.981614e-01	ci right 9.982697e-01	k: 2345808	n:2350000
KS ci ratio: 6.929598e-01	ci left: 8.962994e-06	ci right 1.872421e-05	k: 31	n:2350000
TROAP   2350000 perm   2584 sec   (909 perm/sec)   p_kst 1.319149e-05   p_cons 9.982162e-01   p_joint 1.174468e-04

Joint ci ratio: 2.355161e-01	ci left: 1.035582e-04	ci right 1.315909e-04	k: 276	n:2360000
Cons ci ratio: 1.078576e-04	ci left: 9.981623e-01	ci right 9.982704e-01	k: 2355792	n:2360000
KS ci ratio: 6.929598e-01	ci left: 8.925015e-06	ci right 1.864487e-05	k: 31	n:2360000
TROAP   2360000 perm   2603 sec   (907 perm/sec)   p_kst 1.313559e-05   p_cons 9.982169e-01   p_joint 1.169492e-04

Joint ci ratio: 2.359425e-01	ci left: 1.027243e-04	ci right 1.305889e-04	k: 275	n:2370000
Cons ci ratio: 1.075809e-04	ci left: 9.981641e-01	ci right 9.982719e-01	k: 2365778	n:2370000
KS ci ratio: 6.929598e-01	ci left: 8.887357e-06	ci right 1.856620e-05	k: 31	n:2370000
TROAP   2370000 perm   2623 sec   (904 perm/sec)   p_kst 1.308017e-05   p_cons 9.982186e-01   p_joint 1.160338e-04

Joint ci ratio: 2.350922e-01	ci left: 1.030834e-04	ci right 1.309300e-04	k: 277	n:2380000
Cons ci ratio: 1.073062e-04	ci left: 9.981658e-01	ci right 9.982733e-01	k: 2375764	n:2380000
KS ci ratio: 6.823795e-01	ci left: 9.196646e-06	ci right 1.898081e-05	k: 32	n:2380000
TROAP   2380000 perm   2642 sec   (901 perm/sec)   p_kst 1.344538e-05   p_cons 9.982202e-01   p_joint 1.163866e-04

Joint ci ratio: 2.350923e-01	ci left: 1.026521e-04	ci right 1.303822e-04	k: 277	n:2390000
Cons ci ratio: 1.070840e-04	ci left: 9.981658e-01	ci right 9.982731e-01	k: 2385746	n:2390000
KS ci ratio: 6.823796e-01	ci left: 9.158167e-06	ci right 1.890139e-05	k: 32	n:2390000
TROAP   2390000 perm   2662 sec   (898 perm/sec)   p_kst 1.338912e-05   p_cons 9.982201e-01   p_joint 1.158996e-04

Joint ci ratio: 2.342511e-01	ci left: 1.030087e-04	ci right 1.307212e-04	k: 279	n:2400000
Cons ci ratio: 1.068631e-04	ci left: 9.981659e-01	ci right 9.982729e-01	k: 2395728	n:2400000
KS ci ratio: 6.722696e-01	ci left: 9.464886e-06	ci right 1.931006e-05	k: 33	n:2400000
TROAP   2400000 perm   2682 sec   (895 perm/sec)   p_kst 1.375000e-05   p_cons 9.982200e-01   p_joint 1.162500e-04

Joint ci ratio: 2.342511e-01	ci left: 1.025813e-04	ci right 1.301788e-04	k: 279	n:2410000
Cons ci ratio: 1.066685e-04	ci left: 9.981650e-01	ci right 9.982719e-01	k: 2405708	n:2410000
KS ci ratio: 6.722696e-01	ci left: 9.425612e-06	ci right 1.922993e-05	k: 33	n:2410000
TROAP   2410000 perm   2701 sec   (892 perm/sec)   p_kst 1.369295e-05   p_cons 9.982191e-01   p_joint 1.157676e-04

Joint ci ratio: 2.342512e-01	ci left: 1.021574e-04	ci right 1.296409e-04	k: 279	n:2420000
Cons ci ratio: 1.064502e-04	ci left: 9.981651e-01	ci right 9.982717e-01	k: 2415690	n:2420000
KS ci ratio: 6.722696e-01	ci left: 9.386663e-06	ci right 1.915047e-05	k: 33	n:2420000
TROAP   2420000 perm   2721 sec   (889 perm/sec)   p_kst 1.363636e-05   p_cons 9.982190e-01   p_joint 1.152893e-04

Joint ci ratio: 2.334190e-01	ci left: 1.025118e-04	ci right 1.299785e-04	k: 281	n:2430000
Cons ci ratio: 1.062578e-04	ci left: 9.981643e-01	ci right 9.982707e-01	k: 2425670	n:2430000
KS ci ratio: 6.722696e-01	ci left: 9.348035e-06	ci right 1.907166e-05	k: 33	n:2430000
TROAP   2430000 perm   2741 sec   (887 perm/sec)   p_kst 1.358025e-05   p_cons 9.982181e-01   p_joint 1.156379e-04

Joint ci ratio: 2.325956e-01	ci left: 1.028635e-04	ci right 1.303133e-04	k: 283	n:2440000
Cons ci ratio: 1.061152e-04	ci left: 9.981618e-01	ci right 9.982681e-01	k: 2435646	n:2440000
KS ci ratio: 6.722696e-01	ci left: 9.309723e-06	ci right 1.899350e-05	k: 33	n:2440000
TROAP   2440000 perm   2761 sec   (884 perm/sec)   p_kst 1.352459e-05   p_cons 9.982156e-01   p_joint 1.159836e-04

Joint ci ratio: 2.317809e-01	ci left: 1.032125e-04	ci right 1.306451e-04	k: 285	n:2450000
Cons ci ratio: 1.060337e-04	ci left: 9.981573e-01	ci right 9.982635e-01	k: 2445617	n:2450000
KS ci ratio: 6.722697e-01	ci left: 9.271724e-06	ci right 1.891598e-05	k: 33	n:2450000
TROAP   2450000 perm   2781 sec   (881 perm/sec)   p_kst 1.346939e-05   p_cons 9.982110e-01   p_joint 1.163265e-04

Joint ci ratio: 2.313767e-01	ci left: 1.031759e-04	ci right 1.305441e-04	k: 286	n:2460000
Cons ci ratio: 1.058192e-04	ci left: 9.981574e-01	ci right 9.982634e-01	k: 2455599	n:2460000
KS ci ratio: 6.722697e-01	ci left: 9.234034e-06	ci right 1.883908e-05	k: 33	n:2460000
TROAP   2460000 perm   2801 sec   (878 perm/sec)   p_kst 1.341463e-05   p_cons 9.982110e-01   p_joint 1.162602e-04

Joint ci ratio: 2.313768e-01	ci left: 1.027582e-04	ci right 1.300155e-04	k: 286	n:2470000
Cons ci ratio: 1.055941e-04	ci left: 9.981578e-01	ci right 9.982636e-01	k: 2465582	n:2470000
KS ci ratio: 6.722697e-01	ci left: 9.196650e-06	ci right 1.876281e-05	k: 33	n:2470000
TROAP   2470000 perm   2821 sec   (876 perm/sec)   p_kst 1.336032e-05   p_cons 9.982113e-01   p_joint 1.157895e-04

Joint ci ratio: 2.309748e-01	ci left: 1.027237e-04	ci right 1.299178e-04	k: 287	n:2480000
Cons ci ratio: 1.052870e-04	ci left: 9.981612e-01	ci right 9.982667e-01	k: 2475572	n:2480000
KS ci ratio: 6.722697e-01	ci left: 9.159566e-06	ci right 1.868716e-05	k: 33	n:2480000
TROAP   2480000 perm   2841 sec   (873 perm/sec)   p_kst 1.330645e-05   p_cons 9.982145e-01   p_joint 1.157258e-04

Joint ci ratio: 2.305748e-01	ci left: 1.026895e-04	ci right 1.298208e-04	k: 288	n:2490000
Cons ci ratio: 1.050889e-04	ci left: 9.981608e-01	ci right 9.982661e-01	k: 2485553	n:2490000
KS ci ratio: 6.722697e-01	ci left: 9.122781e-06	ci right 1.861211e-05	k: 33	n:2490000
TROAP   2490000 perm   2861 sec   (870 perm/sec)   p_kst 1.325301e-05   p_cons 9.982141e-01   p_joint 1.156627e-04

Joint ci ratio: 2.301769e-01	ci left: 1.026557e-04	ci right 1.297246e-04	k: 289	n:2500000
Cons ci ratio: 1.049742e-04	ci left: 9.981576e-01	ci right 9.982628e-01	k: 2495527	n:2500000
KS ci ratio: 6.722697e-01	ci left: 9.086290e-06	ci right 1.853766e-05	k: 33	n:2500000
TROAP   2500000 perm   2882 sec   (867 perm/sec)   p_kst 1.320000e-05   p_cons 9.982108e-01   p_joint 1.156000e-04

Joint ci ratio: 2.289954e-01	ci left: 1.033732e-04	ci right 1.304716e-04	k: 292	n:2510000
Cons ci ratio: 1.047427e-04	ci left: 9.981585e-01	ci right 9.982634e-01	k: 2505511	n:2510000
KS ci ratio: 6.722698e-01	ci left: 9.050089e-06	ci right 1.846380e-05	k: 33	n:2510000
TROAP   2510000 perm   2902 sec   (865 perm/sec)   p_kst 1.314741e-05   p_cons 9.982116e-01   p_joint 1.163347e-04

Joint ci ratio: 2.286057e-01	ci left: 1.033371e-04	ci right 1.303734e-04	k: 293	n:2520000
Cons ci ratio: 1.044895e-04	ci left: 9.981602e-01	ci right 9.982649e-01	k: 2515497	n:2520000
KS ci ratio: 6.722698e-01	ci left: 9.014176e-06	ci right 1.839053e-05	k: 33	n:2520000
TROAP   2520000 perm   2923 sec   (862 perm/sec)   p_kst 1.309524e-05   p_cons 9.982131e-01   p_joint 1.162698e-04

Joint ci ratio: 2.282179e-01	ci left: 1.033013e-04	ci right 1.302759e-04	k: 294	n:2530000
Cons ci ratio: 1.042381e-04	ci left: 9.981618e-01	ci right 9.982663e-01	k: 2525483	n:2530000
KS ci ratio: 6.722698e-01	ci left: 8.978547e-06	ci right 1.831784e-05	k: 33	n:2530000
TROAP   2530000 perm   2943 sec   (860 perm/sec)   p_kst 1.304348e-05   p_cons 9.982146e-01   p_joint 1.162055e-04

Joint ci ratio: 2.309751e-01	ci left: 1.002971e-04	ci right 1.268489e-04	k: 287	n:2540000
Cons ci ratio: 1.041147e-04	ci left: 9.981591e-01	ci right 9.982634e-01	k: 2535458	n:2540000
KS ci ratio: 6.722698e-01	ci left: 8.943198e-06	ci right 1.824573e-05	k: 33	n:2540000
TROAP   2540000 perm   2964 sec   (857 perm/sec)   p_kst 1.299213e-05   p_cons 9.982118e-01   p_joint 1.129921e-04

Joint ci ratio: 2.301772e-01	ci left: 1.006428e-04	ci right 1.271810e-04	k: 289	n:2550000
Cons ci ratio: 1.038317e-04	ci left: 9.981619e-01	ci right 9.982660e-01	k: 2545447	n:2550000
KS ci ratio: 6.722698e-01	ci left: 8.908127e-06	ci right 1.817418e-05	k: 33	n:2550000
TROAP   2550000 perm   2984 sec   (854 perm/sec)   p_kst 1.294118e-05   p_cons 9.982145e-01   p_joint 1.133333e-04

Joint ci ratio: 2.301772e-01	ci left: 1.002497e-04	ci right 1.266842e-04	k: 289	n:2560000
Cons ci ratio: 1.036076e-04	ci left: 9.981628e-01	ci right 9.982666e-01	k: 2555431	n:2560000
KS ci ratio: 6.722699e-01	ci left: 8.873329e-06	ci right 1.810318e-05	k: 33	n:2560000
TROAP   2560000 perm   3006 sec   (852 perm/sec)   p_kst 1.289062e-05   p_cons 9.982152e-01   p_joint 1.128906e-04

Joint ci ratio: 2.289957e-01	ci left: 1.009598e-04	ci right 1.274256e-04	k: 292	n:2570000
Cons ci ratio: 1.033398e-04	ci left: 9.981652e-01	ci right 9.982687e-01	k: 2565419	n:2570000
KS ci ratio: 6.625963e-01	ci left: 9.161880e-06	ci right 1.848695e-05	k: 34	n:2570000
TROAP   2570000 perm   3027 sec   (849 perm/sec)   p_kst 1.322957e-05   p_cons 9.982175e-01   p_joint 1.136187e-04

Joint ci ratio: 2.289958e-01	ci left: 1.005685e-04	ci right 1.269317e-04	k: 292	n:2580000
Cons ci ratio: 1.032198e-04	ci left: 9.981625e-01	ci right 9.982659e-01	k: 2575394	n:2580000
KS ci ratio: 6.625963e-01	ci left: 9.126369e-06	ci right 1.841530e-05	k: 34	n:2580000
TROAP   2580000 perm   3048 sec   (846 perm/sec)   p_kst 1.317829e-05   p_cons 9.982147e-01   p_joint 1.131783e-04

Joint ci ratio: 2.270664e-01	ci left: 1.020004e-04	ci right 1.284822e-04	k: 297	n:2590000
Cons ci ratio: 1.030889e-04	ci left: 9.981602e-01	ci right 9.982634e-01	k: 2585370	n:2590000
KS ci ratio: 6.625963e-01	ci left: 9.091132e-06	ci right 1.834420e-05	k: 34	n:2590000
TROAP   2590000 perm   3069 sec   (844 perm/sec)   p_kst 1.312741e-05   p_cons 9.982124e-01   p_joint 1.146718e-04

Joint ci ratio: 2.263082e-01	ci left: 1.023337e-04	ci right 1.288009e-04	k: 299	n:2600000
Cons ci ratio: 1.029029e-04	ci left: 9.981598e-01	ci right 9.982629e-01	k: 2595351	n:2600000
KS ci ratio: 6.625963e-01	ci left: 9.056166e-06	ci right 1.827364e-05	k: 34	n:2600000
TROAP   2600000 perm   3090 sec   (841 perm/sec)   p_kst 1.307692e-05   p_cons 9.982119e-01   p_joint 1.150000e-04

Joint ci ratio: 2.259320e-01	ci left: 1.023030e-04	ci right 1.287122e-04	k: 300	n:2610000
Cons ci ratio: 1.027289e-04	ci left: 9.981591e-01	ci right 9.982620e-01	k: 2605331	n:2610000
KS ci ratio: 6.625964e-01	ci left: 9.021468e-06	ci right 1.820363e-05	k: 34	n:2610000
TROAP   2610000 perm   3112 sec   (839 perm/sec)   p_kst 1.302682e-05   p_cons 9.982111e-01   p_joint 1.149425e-04

Joint ci ratio: 2.255576e-01	ci left: 1.022727e-04	ci right 1.286241e-04	k: 301	n:2620000
Cons ci ratio: 1.024461e-04	ci left: 9.981623e-01	ci right 9.982649e-01	k: 2615321	n:2620000
KS ci ratio: 6.625964e-01	ci left: 8.987035e-06	ci right 1.813415e-05	k: 34	n:2620000
TROAP   2620000 perm   3134 sec   (836 perm/sec)   p_kst 1.297710e-05   p_cons 9.982141e-01   p_joint 1.148855e-04

Joint ci ratio: 2.251851e-01	ci left: 1.022426e-04	ci right 1.285367e-04	k: 302	n:2630000
Cons ci ratio: 1.022854e-04	ci left: 9.981611e-01	ci right 9.982636e-01	k: 2625300	n:2630000
KS ci ratio: 6.625964e-01	ci left: 8.952863e-06	ci right 1.806520e-05	k: 34	n:2630000
TROAP   2630000 perm   3155 sec   (834 perm/sec)   p_kst 1.292776e-05   p_cons 9.982129e-01   p_joint 1.148289e-04

Joint ci ratio: 2.251851e-01	ci left: 1.018553e-04	ci right 1.280499e-04	k: 302	n:2640000
Cons ci ratio: 1.020928e-04	ci left: 9.981612e-01	ci right 9.982635e-01	k: 2635282	n:2640000
KS ci ratio: 6.625964e-01	ci left: 8.918951e-06	ci right 1.799677e-05	k: 34	n:2640000
TROAP   2640000 perm   3177 sec   (831 perm/sec)   p_kst 1.287879e-05   p_cons 9.982129e-01   p_joint 1.143939e-04

Joint ci ratio: 2.286063e-01	ci left: 9.826767e-05	ci right 1.239778e-04	k: 293	n:2650000
Cons ci ratio: 1.018475e-04	ci left: 9.981632e-01	ci right 9.982652e-01	k: 2645269	n:2650000
KS ci ratio: 6.625964e-01	ci left: 8.885294e-06	ci right 1.792886e-05	k: 34	n:2650000
TROAP   2650000 perm   3199 sec   (828 perm/sec)   p_kst 1.283019e-05   p_cons 9.982147e-01   p_joint 1.105660e-04

Joint ci ratio: 2.286064e-01	ci left: 9.789824e-05	ci right 1.235117e-04	k: 293	n:2660000
Cons ci ratio: 1.017217e-04	ci left: 9.981609e-01	ci right 9.982628e-01	k: 2655245	n:2660000
KS ci ratio: 6.625965e-01	ci left: 8.851891e-06	ci right 1.786146e-05	k: 34	n:2660000
TROAP   2660000 perm   3221 sec   (826 perm/sec)   p_kst 1.278195e-05   p_cons 9.982124e-01   p_joint 1.101504e-04

Joint ci ratio: 2.282186e-01	ci left: 9.788469e-05	ci right 1.234450e-04	k: 294	n:2670000
Cons ci ratio: 1.015110e-04	ci left: 9.981617e-01	ci right 9.982634e-01	k: 2665229	n:2670000
KS ci ratio: 6.625965e-01	ci left: 8.818738e-06	ci right 1.779456e-05	k: 34	n:2670000
TROAP   2670000 perm   3243 sec   (823 perm/sec)   p_kst 1.273408e-05   p_cons 9.982131e-01   p_joint 1.101124e-04

Joint ci ratio: 2.278327e-01	ci left: 9.787127e-05	ci right 1.233788e-04	k: 295	n:2680000
Cons ci ratio: 1.013122e-04	ci left: 9.981621e-01	ci right 9.982636e-01	k: 2675212	n:2680000
KS ci ratio: 6.625965e-01	ci left: 8.785832e-06	ci right 1.772816e-05	k: 34	n:2680000
TROAP   2680000 perm   3265 sec   (821 perm/sec)   p_kst 1.268657e-05   p_cons 9.982134e-01   p_joint 1.100746e-04

Joint ci ratio: 2.274489e-01	ci left: 9.785798e-05	ci right 1.233131e-04	k: 296	n:2690000
Cons ci ratio: 1.011251e-04	ci left: 9.981622e-01	ci right 9.982635e-01	k: 2685194	n:2690000
KS ci ratio: 6.625965e-01	ci left: 8.753171e-06	ci right 1.766226e-05	k: 34	n:2690000
TROAP   2690000 perm   3288 sec   (818 perm/sec)   p_kst 1.263941e-05   p_cons 9.982134e-01   p_joint 1.100372e-04

Joint ci ratio: 2.266869e-01	ci left: 9.819416e-05	ci right 1.236392e-04	k: 298	n:2700000
Cons ci ratio: 1.008866e-04	ci left: 9.981641e-01	ci right 9.982652e-01	k: 2695181	n:2700000
KS ci ratio: 6.625965e-01	ci left: 8.720752e-06	ci right 1.759684e-05	k: 34	n:2700000
TROAP   2700000 perm   3310 sec   (816 perm/sec)   p_kst 1.259259e-05   p_cons 9.982152e-01   p_joint 1.103704e-04

Joint ci ratio: 2.263087e-01	ci left: 9.817988e-05	ci right 1.235728e-04	k: 299	n:2710000
Cons ci ratio: 1.006810e-04	ci left: 9.981649e-01	ci right 9.982658e-01	k: 2705165	n:2710000
KS ci ratio: 6.625965e-01	ci left: 8.688572e-06	ci right 1.753191e-05	k: 34	n:2710000
TROAP   2710000 perm   3332 sec   (813 perm/sec)   p_kst 1.254613e-05   p_cons 9.982159e-01   p_joint 1.103321e-04

Joint ci ratio: 2.266870e-01	ci left: 9.747214e-05	ci right 1.227300e-04	k: 298	n:2720000
Cons ci ratio: 1.004973e-04	ci left: 9.981649e-01	ci right 9.982656e-01	k: 2715147	n:2720000
KS ci ratio: 6.625966e-01	ci left: 8.656628e-06	ci right 1.746745e-05	k: 34	n:2720000
TROAP   2720000 perm   3355 sec   (811 perm/sec)   p_kst 1.250000e-05   p_cons 9.982158e-01   p_joint 1.095588e-04

Joint ci ratio: 2.259325e-01	ci left: 9.780617e-05	ci right 1.230545e-04	k: 300	n:2730000
Cons ci ratio: 1.002631e-04	ci left: 9.981668e-01	ci right 9.982673e-01	k: 2725134	n:2730000
KS ci ratio: 6.625966e-01	ci left: 8.624919e-06	ci right 1.740347e-05	k: 34	n:2730000
TROAP   2730000 perm   3378 sec   (808 perm/sec)   p_kst 1.245421e-05   p_cons 9.982176e-01   p_joint 1.098901e-04

Joint ci ratio: 2.259326e-01	ci left: 9.744921e-05	ci right 1.226054e-04	k: 300	n:2740000
Cons ci ratio: 1.001638e-04	ci left: 9.981639e-01	ci right 9.982642e-01	k: 2735108	n:2740000
KS ci ratio: 6.625966e-01	ci left: 8.593441e-06	ci right 1.733995e-05	k: 34	n:2740000
TROAP   2740000 perm   3401 sec   (806 perm/sec)   p_kst 1.240876e-05   p_cons 9.982146e-01   p_joint 1.094891e-04

Joint ci ratio: 2.251857e-01	ci left: 9.778103e-05	ci right 1.229279e-04	k: 302	n:2750000
Cons ci ratio: 1.000136e-04	ci left: 9.981628e-01	ci right 9.982630e-01	k: 2745087	n:2750000
KS ci ratio: 6.625966e-01	ci left: 8.562192e-06	ci right 1.727690e-05	k: 34	n:2750000
TROAP   2750000 perm   3424 sec   (803 perm/sec)   p_kst 1.236364e-05   p_cons 9.982135e-01   p_joint 1.098182e-04

Joint ci ratio: 2.248150e-01	ci left: 9.776865e-05	ci right 1.228652e-04	k: 303	n:2760000
Cons ci ratio: 9.985382e-05	ci left: 9.981621e-01	ci right 9.982622e-01	k: 2755067	n:2760000
KS ci ratio: 6.625966e-01	ci left: 8.531170e-06	ci right 1.721430e-05	k: 34	n:2760000
TROAP   2760000 perm   3447 sec   (801 perm/sec)   p_kst 1.231884e-05   p_cons 9.982127e-01   p_joint 1.097826e-04

Joint ci ratio: 2.248150e-01	ci left: 9.741570e-05	ci right 1.224217e-04	k: 303	n:2770000
Cons ci ratio: 9.964441e-05	ci left: 9.981633e-01	ci right 9.982631e-01	k: 2765052	n:2770000
KS ci ratio: 6.625966e-01	ci left: 8.500371e-06	ci right 1.715216e-05	k: 34	n:2770000
TROAP   2770000 perm   3471 sec   (798 perm/sec)   p_kst 1.227437e-05   p_cons 9.982137e-01   p_joint 1.093863e-04

Joint ci ratio: 2.248151e-01	ci left: 9.706528e-05	ci right 1.219813e-04	k: 303	n:2780000
Cons ci ratio: 9.951651e-05	ci left: 9.981615e-01	ci right 9.982612e-01	k: 2775029	n:2780000
KS ci ratio: 6.625966e-01	ci left: 8.469794e-06	ci right 1.709046e-05	k: 34	n:2780000
TROAP   2780000 perm   3494 sec   (796 perm/sec)   p_kst 1.223022e-05   p_cons 9.982119e-01   p_joint 1.089928e-04

Joint ci ratio: 2.244462e-01	ci left: 9.705563e-05	ci right 1.219226e-04	k: 304	n:2790000
Cons ci ratio: 9.930924e-05	ci left: 9.981626e-01	ci right 9.982621e-01	k: 2785014	n:2790000
KS ci ratio: 6.625967e-01	ci left: 8.439437e-06	ci right 1.702920e-05	k: 34	n:2790000
TROAP   2790000 perm   3517 sec   (793 perm/sec)   p_kst 1.218638e-05   p_cons 9.982129e-01   p_joint 1.089606e-04

Joint ci ratio: 2.240792e-01	ci left: 9.704608e-05	ci right 1.218644e-04	k: 305	n:2800000
Cons ci ratio: 9.914291e-05	ci left: 9.981623e-01	ci right 9.982616e-01	k: 2794995	n:2800000
KS ci ratio: 6.625967e-01	ci left: 8.409296e-06	ci right 1.696838e-05	k: 34	n:2800000
TROAP   2800000 perm   3542 sec   (790 perm/sec)   p_kst 1.214286e-05   p_cons 9.982125e-01   p_joint 1.089286e-04

Joint ci ratio: 1.609581e-01	ci left: 1.940465e-04	ci right 2.283497e-04	k: 592	n:2810000
Cons ci ratio: 9.898727e-05	ci left: 9.981616e-01	ci right 9.982608e-01	k: 2804975	n:2810000
KS ci ratio: 6.533290e-01	ci left: 8.675738e-06	ci right 1.732257e-05	k: 35	n:2810000
TROAP   2810000 perm   3566 sec   (788 perm/sec)   p_kst 1.245552e-05   p_cons 9.982117e-01   p_joint 2.106762e-04

Joint ci ratio: 1.605525e-01	ci left: 1.943794e-04	ci right 2.286465e-04	k: 595	n:2820000
Cons ci ratio: 9.880291e-05	ci left: 9.981621e-01	ci right 9.982610e-01	k: 2814958	n:2820000
KS ci ratio: 6.533290e-01	ci left: 8.644973e-06	ci right 1.726114e-05	k: 35	n:2820000
TROAP   2820000 perm   3591 sec   (785 perm/sec)   p_kst 1.241135e-05   p_cons 9.982121e-01   p_joint 2.109929e-04

Joint ci ratio: 1.604180e-01	ci left: 1.940317e-04	ci right 2.282061e-04	k: 596	n:2830000
Cons ci ratio: 9.866837e-05	ci left: 9.981607e-01	ci right 9.982595e-01	k: 2824936	n:2830000
KS ci ratio: 6.533291e-01	ci left: 8.614425e-06	ci right 1.720014e-05	k: 35	n:2830000
TROAP   2830000 perm   3614 sec   (783 perm/sec)   p_kst 1.236749e-05   p_cons 9.982106e-01   p_joint 2.106007e-04

Joint ci ratio: 1.601499e-01	ci left: 1.940245e-04	ci right 2.281350e-04	k: 598	n:2840000
Cons ci ratio: 9.847609e-05	ci left: 9.981614e-01	ci right 9.982601e-01	k: 2834920	n:2840000
KS ci ratio: 6.533291e-01	ci left: 8.584093e-06	ci right 1.713958e-05	k: 35	n:2840000
TROAP   2840000 perm   3637 sec   (781 perm/sec)   p_kst 1.232394e-05   p_cons 9.982113e-01   p_joint 2.105634e-04

Joint ci ratio: 1.596178e-01	ci left: 1.946910e-04	ci right 2.287941e-04	k: 602	n:2850000
Cons ci ratio: 9.833319e-05	ci left: 9.981604e-01	ci right 9.982589e-01	k: 2844899	n:2850000
KS ci ratio: 6.533291e-01	ci left: 8.553973e-06	ci right 1.707944e-05	k: 35	n:2850000
TROAP   2850000 perm   3660 sec   (779 perm/sec)   p_kst 1.228070e-05   p_cons 9.982102e-01   p_joint 2.112281e-04

Joint ci ratio: 2.116474e-01	ci left: 1.072420e-04	ci right 1.329490e-04	k: 342	n:2860000
Cons ci ratio: 9.812365e-05	ci left: 9.981619e-01	ci right 9.982602e-01	k: 2854885	n:2860000
KS ci ratio: 7.040488e-01	ci left: 7.077240e-06	ci right 1.497439e-05	k: 30	n:2860000
TROAP   2860000 perm   3684 sec   (776 perm/sec)   p_kst 1.048951e-05   p_cons 9.982115e-01   p_joint 1.195804e-04

Joint ci ratio: 2.113395e-01	ci left: 1.071983e-04	ci right 1.328526e-04	k: 343	n:2870000
Cons ci ratio: 9.794407e-05	ci left: 9.981623e-01	ci right 9.982604e-01	k: 2864868	n:2870000
KS ci ratio: 7.040489e-01	ci left: 7.052580e-06	ci right 1.492222e-05	k: 30	n:2870000
TROAP   2870000 perm   3707 sec   (774 perm/sec)   p_kst 1.045296e-05   p_cons 9.982118e-01   p_joint 1.195122e-04

Joint ci ratio: 2.110330e-01	ci left: 1.071549e-04	ci right 1.327569e-04	k: 344	n:2880000
Cons ci ratio: 9.773693e-05	ci left: 9.981637e-01	ci right 9.982616e-01	k: 2874854	n:2880000
KS ci ratio: 7.040489e-01	ci left: 7.028092e-06	ci right 1.487041e-05	k: 30	n:2880000
TROAP   2880000 perm   3730 sec   (772 perm/sec)   p_kst 1.041667e-05   p_cons 9.982132e-01   p_joint 1.194444e-04

Joint ci ratio: 2.110331e-01	ci left: 1.067841e-04	ci right 1.322975e-04	k: 344	n:2890000
Cons ci ratio: 9.752159e-05	ci left: 9.981655e-01	ci right 9.982632e-01	k: 2884841	n:2890000
KS ci ratio: 7.040489e-01	ci left: 7.003773e-06	ci right 1.481895e-05	k: 30	n:2890000
TROAP   2890000 perm   3754 sec   (770 perm/sec)   p_kst 1.038062e-05   p_cons 9.982149e-01   p_joint 1.190311e-04

Joint ci ratio: 2.104240e-01	ci left: 1.070692e-04	ci right 1.325673e-04	k: 346	n:2900000
Cons ci ratio: 9.737350e-05	ci left: 9.981649e-01	ci right 9.982624e-01	k: 2894821	n:2900000
KS ci ratio: 7.040489e-01	ci left: 6.979622e-06	ci right 1.476785e-05	k: 30	n:2900000
TROAP   2900000 perm   3777 sec   (768 perm/sec)   p_kst 1.034483e-05   p_cons 9.982141e-01   p_joint 1.193103e-04

Joint ci ratio: 2.101215e-01	ci left: 1.070268e-04	ci right 1.324735e-04	k: 347	n:2910000
Cons ci ratio: 9.722607e-05	ci left: 9.981642e-01	ci right 9.982616e-01	k: 2904801	n:2910000
KS ci ratio: 7.040489e-01	ci left: 6.955637e-06	ci right 1.471710e-05	k: 30	n:2910000
TROAP   2910000 perm   3801 sec   (766 perm/sec)   p_kst 1.030928e-05   p_cons 9.982134e-01   p_joint 1.192440e-04

Joint ci ratio: 2.095202e-01	ci left: 1.073092e-04	ci right 1.327407e-04	k: 349	n:2920000
Cons ci ratio: 9.705135e-05	ci left: 9.981646e-01	ci right 9.982618e-01	k: 2914784	n:2920000
KS ci ratio: 6.929607e-01	ci left: 7.213366e-06	ci right 1.506915e-05	k: 31	n:2920000
TROAP   2920000 perm   3824 sec   (764 perm/sec)   p_kst 1.061644e-05   p_cons 9.982137e-01   p_joint 1.195205e-04

Joint ci ratio: 2.161044e-01	ci left: 1.001576e-04	ci right 1.247391e-04	k: 328	n:2930000
Cons ci ratio: 9.692390e-05	ci left: 9.981633e-01	ci right 9.982603e-01	k: 2924762	n:2930000
KS ci ratio: 6.929607e-01	ci left: 7.188747e-06	ci right 1.501772e-05	k: 31	n:2930000
TROAP   2930000 perm   3848 sec   (761 perm/sec)   p_kst 1.058020e-05   p_cons 9.982123e-01   p_joint 1.119454e-04

Joint ci ratio: 2.161045e-01	ci left: 9.981689e-05	ci right 1.243149e-04	k: 328	n:2940000
Cons ci ratio: 9.676925e-05	ci left: 9.981629e-01	ci right 9.982599e-01	k: 2934743	n:2940000
KS ci ratio: 6.929608e-01	ci left: 7.164295e-06	ci right 1.496664e-05	k: 31	n:2940000
TROAP   2940000 perm   3872 sec   (759 perm/sec)   p_kst 1.054422e-05   p_cons 9.982119e-01   p_joint 1.115646e-04

Joint ci ratio: 2.157768e-01	ci left: 9.979918e-05	ci right 1.242507e-04	k: 329	n:2950000
Cons ci ratio: 9.661532e-05	ci left: 9.981626e-01	ci right 9.982594e-01	k: 2944724	n:2950000
KS ci ratio: 6.823805e-01	ci left: 7.419664e-06	ci right 1.531334e-05	k: 32	n:2950000
TROAP   2950000 perm   3896 sec   (757 perm/sec)   p_kst 1.084746e-05   p_cons 9.982115e-01   p_joint 1.115254e-04

Joint ci ratio: 2.151258e-01	ci left: 1.001012e-04	ci right 1.245430e-04	k: 331	n:2960000
Cons ci ratio: 9.640737e-05	ci left: 9.981644e-01	ci right 9.982610e-01	k: 2954711	n:2960000
KS ci ratio: 6.823805e-01	ci left: 7.394598e-06	ci right 1.526161e-05	k: 32	n:2960000
TROAP   2960000 perm   3921 sec   (755 perm/sec)   p_kst 1.081081e-05   p_cons 9.982132e-01   p_joint 1.118243e-04

Joint ci ratio: 2.138414e-01	ci left: 1.010387e-04	ci right 1.255427e-04	k: 335	n:2970000
Cons ci ratio: 9.624610e-05	ci left: 9.981644e-01	ci right 9.982608e-01	k: 2964693	n:2970000
KS ci ratio: 6.823805e-01	ci left: 7.369700e-06	ci right 1.521022e-05	k: 32	n:2970000
TROAP   2970000 perm   3945 sec   (753 perm/sec)   p_kst 1.077441e-05   p_cons 9.982131e-01   p_joint 1.127946e-04

Joint ci ratio: 2.138414e-01	ci left: 1.006996e-04	ci right 1.251215e-04	k: 335	n:2980000
Cons ci ratio: 9.605852e-05	ci left: 9.981655e-01	ci right 9.982617e-01	k: 2974678	n:2980000
KS ci ratio: 6.823805e-01	ci left: 7.344970e-06	ci right 1.515918e-05	k: 32	n:2980000
TROAP   2980000 perm   3969 sec   (751 perm/sec)   p_kst 1.073826e-05   p_cons 9.982141e-01   p_joint 1.124161e-04

Joint ci ratio: 2.138415e-01	ci left: 1.003628e-04	ci right 1.247030e-04	k: 335	n:2990000
Cons ci ratio: 9.588100e-05	ci left: 9.981662e-01	ci right 9.982622e-01	k: 2984662	n:2990000
KS ci ratio: 6.823805e-01	ci left: 7.320405e-06	ci right 1.510848e-05	k: 32	n:2990000
TROAP   2990000 perm   3993 sec   (749 perm/sec)   p_kst 1.070234e-05   p_cons 9.982147e-01   p_joint 1.120401e-04

Joint ci ratio: 2.132078e-01	ci left: 1.006593e-04	ci right 1.249896e-04	k: 337	n:3000000
Cons ci ratio: 9.567759e-05	ci left: 9.981679e-01	ci right 9.982638e-01	k: 2994649	n:3000000
KS ci ratio: 6.823805e-01	ci left: 7.296003e-06	ci right 1.505812e-05	k: 32	n:3000000
TROAP   3000000 perm   4017 sec   (747 perm/sec)   p_kst 1.066667e-05   p_cons 9.982163e-01   p_joint 1.123333e-04

Joint ci ratio: 2.128932e-01	ci left: 1.006394e-04	ci right 1.249243e-04	k: 338	n:3010000
Cons ci ratio: 9.552886e-05	ci left: 9.981676e-01	ci right 9.982633e-01	k: 3004630	n:3010000
KS ci ratio: 6.823806e-01	ci left: 7.271764e-06	ci right 1.500809e-05	k: 32	n:3010000
TROAP   3010000 perm   4041 sec   (745 perm/sec)   p_kst 1.063123e-05   p_cons 9.982159e-01   p_joint 1.122924e-04

Joint ci ratio: 2.128932e-01	ci left: 1.003061e-04	ci right 1.245106e-04	k: 338	n:3020000
Cons ci ratio: 9.538968e-05	ci left: 9.981670e-01	ci right 9.982625e-01	k: 3014610	n:3020000
KS ci ratio: 6.823806e-01	ci left: 7.247685e-06	ci right 1.495840e-05	k: 32	n:3020000
TROAP   3020000 perm   4066 sec   (743 perm/sec)   p_kst 1.059603e-05   p_cons 9.982152e-01   p_joint 1.119205e-04

Joint ci ratio: 2.135241e-01	ci left: 9.935026e-05	ci right 1.234044e-04	k: 336	n:3030000
Cons ci ratio: 1.021373e-04	ci left: 9.978959e-01	ci right 9.979982e-01	k: 3023781	n:3030000
KS ci ratio: 6.823806e-01	ci left: 7.223765e-06	ci right 1.490903e-05	k: 32	n:3030000
TROAP   3030000 perm   4091 sec   (741 perm/sec)   p_kst 1.056106e-05   p_cons 9.979475e-01   p_joint 1.108911e-04

Joint ci ratio: 2.128933e-01	ci left: 9.964622e-05	ci right 1.236915e-04	k: 338	n:3040000
Cons ci ratio: 1.019813e-04	ci left: 9.978955e-01	ci right 9.979976e-01	k: 3033759	n:3040000
KS ci ratio: 6.823806e-01	ci left: 7.200003e-06	ci right 1.485998e-05	k: 32	n:3040000
TROAP   3040000 perm   4116 sec   (739 perm/sec)   p_kst 1.052632e-05   p_cons 9.979470e-01   p_joint 1.111842e-04

Joint ci ratio: 2.135242e-01	ci left: 9.869878e-05	ci right 1.225952e-04	k: 336	n:3050000
Cons ci ratio: 1.018096e-04	ci left: 9.978958e-01	ci right 9.979977e-01	k: 3043739	n:3050000
KS ci ratio: 6.823806e-01	ci left: 7.176396e-06	ci right 1.481126e-05	k: 32	n:3050000
TROAP   3050000 perm   4140 sec   (737 perm/sec)   p_kst 1.049180e-05   p_cons 9.979472e-01   p_joint 1.101639e-04

Joint ci ratio: 2.125800e-01	ci left: 9.930432e-05	ci right 1.232272e-04	k: 339	n:3060000
Cons ci ratio: 1.016469e-04	ci left: 9.978957e-01	ci right 9.979975e-01	k: 3053718	n:3060000
KS ci ratio: 6.823806e-01	ci left: 7.152944e-06	ci right 1.476286e-05	k: 32	n:3060000
TROAP   3060000 perm   4165 sec   (735 perm/sec)   p_kst 1.045752e-05   p_cons 9.979471e-01   p_joint 1.107843e-04

Joint ci ratio: 2.135243e-01	ci left: 9.805578e-05	ci right 1.217966e-04	k: 336	n:3070000
Cons ci ratio: 1.014931e-04	ci left: 9.978953e-01	ci right 9.979969e-01	k: 3063696	n:3070000
KS ci ratio: 6.823806e-01	ci left: 7.129645e-06	ci right 1.471477e-05	k: 32	n:3070000
TROAP   3070000 perm   4190 sec   (733 perm/sec)   p_kst 1.042345e-05   p_cons 9.979466e-01   p_joint 1.094463e-04

Joint ci ratio: 2.132082e-01	ci left: 9.804475e-05	ci right 1.217431e-04	k: 337	n:3080000
Cons ci ratio: 1.012998e-04	ci left: 9.978966e-01	ci right 9.979980e-01	k: 3073679	n:3080000
KS ci ratio: 6.823806e-01	ci left: 7.106496e-06	ci right 1.466700e-05	k: 32	n:3080000
TROAP   3080000 perm   4215 sec   (731 perm/sec)   p_kst 1.038961e-05   p_cons 9.979477e-01   p_joint 1.094156e-04

Joint ci ratio: 2.141608e-01	ci left: 9.680853e-05	ci right 1.203264e-04	k: 334	n:3090000
Cons ci ratio: 1.011555e-04	ci left: 9.978958e-01	ci right 9.979971e-01	k: 3083656	n:3090000
KS ci ratio: 6.823807e-01	ci left: 7.083498e-06	ci right 1.461953e-05	k: 32	n:3090000
TROAP   3090000 perm   4240 sec   (729 perm/sec)   p_kst 1.035599e-05   p_cons 9.979469e-01   p_joint 1.080906e-04

Joint ci ratio: 2.141609e-01	ci left: 9.649624e-05	ci right 1.199382e-04	k: 334	n:3100000
Cons ci ratio: 1.009561e-04	ci left: 9.978974e-01	ci right 9.979985e-01	k: 3093640	n:3100000
KS ci ratio: 6.823807e-01	ci left: 7.060648e-06	ci right 1.457237e-05	k: 32	n:3100000
TROAP   3100000 perm   4264 sec   (727 perm/sec)   p_kst 1.032258e-05   p_cons 9.979484e-01   p_joint 1.077419e-04

Joint ci ratio: 2.138419e-01	ci left: 9.649027e-05	ci right 1.198913e-04	k: 335	n:3110000
Cons ci ratio: 1.007975e-04	ci left: 9.978973e-01	ci right 9.979982e-01	k: 3103619	n:3110000
KS ci ratio: 6.823807e-01	ci left: 7.037945e-06	ci right 1.452552e-05	k: 32	n:3110000
TROAP   3110000 perm   4289 sec   (725 perm/sec)   p_kst 1.028939e-05   p_cons 9.979482e-01   p_joint 1.077170e-04

Joint ci ratio: 2.132083e-01	ci left: 9.678776e-05	ci right 1.201823e-04	k: 337	n:3120000
Cons ci ratio: 1.006632e-04	ci left: 9.978963e-01	ci right 9.979970e-01	k: 3113595	n:3120000
KS ci ratio: 6.823807e-01	ci left: 7.015387e-06	ci right 1.447896e-05	k: 32	n:3120000
TROAP   3120000 perm   4314 sec   (723 perm/sec)   p_kst 1.025641e-05   p_cons 9.979471e-01   p_joint 1.080128e-04

Joint ci ratio: 2.122683e-01	ci left: 9.738594e-05	ci right 1.208078e-04	k: 340	n:3130000
Cons ci ratio: 1.004276e-04	ci left: 9.978994e-01	ci right 9.980000e-01	k: 3123584	n:3130000
KS ci ratio: 6.823807e-01	ci left: 6.992974e-06	ci right 1.443270e-05	k: 32	n:3130000
TROAP   3130000 perm   4339 sec   (721 perm/sec)   p_kst 1.022364e-05   p_cons 9.979502e-01   p_joint 1.086262e-04

Joint ci ratio: 2.119577e-01	ci left: 9.737735e-05	ci right 1.207584e-04	k: 341	n:3140000
Cons ci ratio: 1.002480e-04	ci left: 9.979003e-01	ci right 9.980007e-01	k: 3133566	n:3140000
KS ci ratio: 6.823807e-01	ci left: 6.970703e-06	ci right 1.438674e-05	k: 32	n:3140000
TROAP   3140000 perm   4364 sec   (720 perm/sec)   p_kst 1.019108e-05   p_cons 9.979510e-01   p_joint 1.085987e-04

Joint ci ratio: 2.138421e-01	ci left: 9.526499e-05	ci right 1.183689e-04	k: 335	n:3150000
Cons ci ratio: 1.001471e-04	ci left: 9.978980e-01	ci right 9.979982e-01	k: 3143538	n:3150000
KS ci ratio: 6.823807e-01	ci left: 6.948574e-06	ci right 1.434107e-05	k: 32	n:3150000
TROAP   3150000 perm   4389 sec   (718 perm/sec)   p_kst 1.015873e-05   p_cons 9.979486e-01   p_joint 1.063492e-04

Joint ci ratio: 2.132085e-01	ci left: 9.556259e-05	ci right 1.186610e-04	k: 337	n:3160000
Cons ci ratio: 1.000617e-04	ci left: 9.978950e-01	ci right 9.979952e-01	k: 3153508	n:3160000
KS ci ratio: 6.823807e-01	ci left: 6.926585e-06	ci right 1.429568e-05	k: 32	n:3160000
TROAP   3160000 perm   4414 sec   (716 perm/sec)   p_kst 1.012658e-05   p_cons 9.979456e-01   p_joint 1.066456e-04

Joint ci ratio: 2.128938e-01	ci left: 9.555976e-05	ci right 1.186190e-04	k: 338	n:3170000
Cons ci ratio: 9.989957e-05	ci left: 9.978953e-01	ci right 9.979953e-01	k: 3163488	n:3170000
KS ci ratio: 6.722707e-01	ci left: 7.165841e-06	ci right 1.461961e-05	k: 33	n:3170000
TROAP   3170000 perm   4440 sec   (714 perm/sec)   p_kst 1.041009e-05   p_cons 9.979457e-01   p_joint 1.066246e-04

Joint ci ratio: 2.116487e-01	ci left: 9.645026e-05	ci right 1.195706e-04	k: 342	n:3180000
Cons ci ratio: 9.970759e-05	ci left: 9.978968e-01	ci right 9.979966e-01	k: 3173472	n:3180000
KS ci ratio: 6.722708e-01	ci left: 7.143307e-06	ci right 1.457364e-05	k: 33	n:3180000
TROAP   3180000 perm   4465 sec   (712 perm/sec)   p_kst 1.037736e-05   p_cons 9.979472e-01   p_joint 1.075472e-04

Joint ci ratio: 2.113408e-01	ci left: 9.644478e-05	ci right 1.195258e-04	k: 343	n:3190000
Cons ci ratio: 9.960044e-05	ci left: 9.978948e-01	ci right 9.979945e-01	k: 3183445	n:3190000
KS ci ratio: 6.722708e-01	ci left: 7.120914e-06	ci right 1.452795e-05	k: 33	n:3190000
TROAP   3190000 perm   4491 sec   (710 perm/sec)   p_kst 1.034483e-05   p_cons 9.979451e-01   p_joint 1.075235e-04

Joint ci ratio: 2.113408e-01	ci left: 9.614339e-05	ci right 1.191523e-04	k: 343	n:3200000
Cons ci ratio: 9.941778e-05	ci left: 9.978960e-01	ci right 9.979956e-01	k: 3193428	n:3200000
KS ci ratio: 6.722708e-01	ci left: 7.098661e-06	ci right 1.448255e-05	k: 33	n:3200000
TROAP   3200000 perm   4517 sec   (709 perm/sec)   p_kst 1.031250e-05   p_cons 9.979463e-01   p_joint 1.071875e-04

Joint ci ratio: 2.122686e-01	ci left: 9.495886e-05	ci right 1.177970e-04	k: 340	n:3210000
Cons ci ratio: 9.928135e-05	ci left: 9.978953e-01	ci right 9.979947e-01	k: 3203405	n:3210000
KS ci ratio: 6.722708e-01	ci left: 7.076547e-06	ci right 1.443744e-05	k: 33	n:3210000
TROAP   3210000 perm   4542 sec   (707 perm/sec)   p_kst 1.028037e-05   p_cons 9.979455e-01   p_joint 1.059190e-04

Joint ci ratio: 2.116488e-01	ci left: 9.525211e-05	ci right 1.180852e-04	k: 342	n:3220000
Cons ci ratio: 9.908541e-05	ci left: 9.978972e-01	ci right 9.979963e-01	k: 3213390	n:3220000
KS ci ratio: 6.625972e-01	ci left: 7.312429e-06	ci right 1.475512e-05	k: 34	n:3220000
TROAP   3220000 perm   4568 sec   (705 perm/sec)   p_kst 1.055901e-05   p_cons 9.979472e-01   p_joint 1.062112e-04

Joint ci ratio: 2.151269e-01	ci left: 9.173360e-05	ci right 1.141324e-04	k: 331	n:3230000
Cons ci ratio: 9.889804e-05	ci left: 9.978987e-01	ci right 9.979977e-01	k: 3223374	n:3230000
KS ci ratio: 6.625972e-01	ci left: 7.289790e-06	ci right 1.470944e-05	k: 34	n:3230000
TROAP   3230000 perm   4594 sec   (703 perm/sec)   p_kst 1.052632e-05   p_cons 9.979486e-01   p_joint 1.024768e-04

Joint ci ratio: 2.148036e-01	ci left: 9.174250e-05	ci right 1.141054e-04	k: 332	n:3240000
Cons ci ratio: 9.877122e-05	ci left: 9.978976e-01	ci right 9.979965e-01	k: 3233350	n:3240000
KS ci ratio: 6.625973e-01	ci left: 7.267291e-06	ci right 1.466404e-05	k: 34	n:3240000
TROAP   3240000 perm   4620 sec   (701 perm/sec)   p_kst 1.049383e-05   p_cons 9.979475e-01   p_joint 1.024691e-04

Joint ci ratio: 2.138424e-01	ci left: 9.233375e-05	ci right 1.147268e-04	k: 335	n:3250000
Cons ci ratio: 9.860042e-05	ci left: 9.978985e-01	ci right 9.979972e-01	k: 3243332	n:3250000
KS ci ratio: 6.625973e-01	ci left: 7.244930e-06	ci right 1.461892e-05	k: 34	n:3250000
TROAP   3250000 perm   4646 sec   (700 perm/sec)   p_kst 1.046154e-05   p_cons 9.979483e-01   p_joint 1.030769e-04

Joint ci ratio: 2.135249e-01	ci left: 9.234085e-05	ci right 1.146980e-04	k: 336	n:3260000
Cons ci ratio: 9.845999e-05	ci left: 9.978981e-01	ci right 9.979967e-01	k: 3253310	n:3260000
KS ci ratio: 6.625973e-01	ci left: 7.222706e-06	ci right 1.457408e-05	k: 34	n:3260000
TROAP   3260000 perm   4672 sec   (698 perm/sec)   p_kst 1.042945e-05   p_cons 9.979479e-01   p_joint 1.030675e-04

Joint ci ratio: 2.177670e-01	ci left: 8.829759e-05	ci right 1.101574e-04	k: 323	n:3270000
Cons ci ratio: 9.831281e-05	ci left: 9.978981e-01	ci right 9.979965e-01	k: 3263289	n:3270000
KS ci ratio: 6.625973e-01	ci left: 7.200618e-06	ci right 1.452951e-05	k: 34	n:3270000
TROAP   3270000 perm   4698 sec   (696 perm/sec)   p_kst 1.039755e-05   p_cons 9.979477e-01   p_joint 9.877676e-05

Joint ci ratio: 2.167657e-01	ci left: 8.889326e-05	ci right 1.107859e-04	k: 326	n:3280000
Cons ci ratio: 9.821012e-05	ci left: 9.978961e-01	ci right 9.979944e-01	k: 3273262	n:3280000
KS ci ratio: 6.625973e-01	ci left: 7.178665e-06	ci right 1.448521e-05	k: 34	n:3280000
TROAP   3280000 perm   4724 sec   (694 perm/sec)   p_kst 1.036585e-05   p_cons 9.979457e-01   p_joint 9.939024e-05

Joint ci ratio: 2.167657e-01	ci left: 8.862306e-05	ci right 1.104491e-04	k: 326	n:3290000
Cons ci ratio: 9.807132e-05	ci left: 9.978958e-01	ci right 9.979939e-01	k: 3283240	n:3290000
KS ci ratio: 6.625973e-01	ci left: 7.156846e-06	ci right 1.444118e-05	k: 34	n:3290000
TROAP   3290000 perm   4751 sec   (693 perm/sec)   p_kst 1.033435e-05   p_cons 9.979453e-01   p_joint 9.908815e-05

Joint ci ratio: 2.229905e-01	ci left: 8.320026e-05	ci right 1.043601e-04	k: 308	n:3300000
Cons ci ratio: 9.791863e-05	ci left: 9.978960e-01	ci right 9.979940e-01	k: 3293220	n:3300000
KS ci ratio: 6.625973e-01	ci left: 7.135158e-06	ci right 1.439742e-05	k: 34	n:3300000
TROAP   3300000 perm   4777 sec   (691 perm/sec)   p_kst 1.030303e-05   p_cons 9.979455e-01   p_joint 9.333333e-05

Joint ci ratio: 2.229906e-01	ci left: 8.294889e-05	ci right 1.040448e-04	k: 308	n:3310000
Cons ci ratio: 9.774505e-05	ci left: 9.978972e-01	ci right 9.979950e-01	k: 3303203	n:3310000
KS ci ratio: 6.625973e-01	ci left: 7.113602e-06	ci right 1.435393e-05	k: 34	n:3310000
TROAP   3310000 perm   4804 sec   (689 perm/sec)   p_kst 1.027190e-05   p_cons 9.979465e-01   p_joint 9.305136e-05

Joint ci ratio: 2.240811e-01	ci left: 8.184602e-05	ci right 1.027773e-04	k: 305	n:3320000
Cons ci ratio: 9.763689e-05	ci left: 9.978956e-01	ci right 9.979933e-01	k: 3313177	n:3320000
KS ci ratio: 6.625973e-01	ci left: 7.092175e-06	ci right 1.431069e-05	k: 34	n:3320000
TROAP   3320000 perm   4831 sec   (687 perm/sec)   p_kst 1.024096e-05   p_cons 9.979449e-01   p_joint 9.186747e-05

Joint ci ratio: 2.240812e-01	ci left: 8.160024e-05	ci right 1.024687e-04	k: 305	n:3330000
Cons ci ratio: 9.750763e-05	ci left: 9.978949e-01	ci right 9.979925e-01	k: 3323154	n:3330000
KS ci ratio: 6.625974e-01	ci left: 7.070877e-06	ci right 1.426772e-05	k: 34	n:3330000
TROAP   3330000 perm   4857 sec   (686 perm/sec)   p_kst 1.021021e-05   p_cons 9.979441e-01   p_joint 9.159159e-05

Joint ci ratio: 2.229907e-01	ci left: 8.220384e-05	ci right 1.031103e-04	k: 308	n:3340000
Cons ci ratio: 9.730072e-05	ci left: 9.978976e-01	ci right 9.979950e-01	k: 3333142	n:3340000
KS ci ratio: 6.625974e-01	ci left: 7.049707e-06	ci right 1.422500e-05	k: 34	n:3340000
TROAP   3340000 perm   4883 sec   (684 perm/sec)   p_kst 1.017964e-05   p_cons 9.979467e-01   p_joint 9.221557e-05

Joint ci ratio: 2.222725e-01	ci left: 8.252218e-05	ci right 1.034327e-04	k: 310	n:3350000
Cons ci ratio: 9.717282e-05	ci left: 9.978969e-01	ci right 9.979942e-01	k: 3343119	n:3350000
KS ci ratio: 6.625974e-01	ci left: 7.028663e-06	ci right 1.418254e-05	k: 34	n:3350000
TROAP   3350000 perm   4910 sec   (682 perm/sec)   p_kst 1.014925e-05   p_cons 9.979460e-01   p_joint 9.253731e-05

Joint ci ratio: 2.219160e-01	ci left: 8.255764e-05	ci right 1.034390e-04	k: 311	n:3360000
Cons ci ratio: 9.703133e-05	ci left: 9.978968e-01	ci right 9.979940e-01	k: 3353098	n:3360000
KS ci ratio: 6.625974e-01	ci left: 7.007744e-06	ci right 1.414033e-05	k: 34	n:3360000
TROAP   3360000 perm   4937 sec   (681 perm/sec)   p_kst 1.011905e-05   p_cons 9.979458e-01   p_joint 9.255952e-05

Joint ci ratio: 2.219160e-01	ci left: 8.231266e-05	ci right 1.031321e-04	k: 311	n:3370000
Cons ci ratio: 9.691849e-05	ci left: 9.978956e-01	ci right 9.979926e-01	k: 3363073	n:3370000
KS ci ratio: 6.625974e-01	ci left: 6.986950e-06	ci right 1.409837e-05	k: 34	n:3370000
TROAP   3370000 perm   4965 sec   (679 perm/sec)   p_kst 1.008902e-05   p_cons 9.979445e-01   p_joint 9.228487e-05

Joint ci ratio: 2.215612e-01	ci left: 8.234856e-05	ci right 1.031392e-04	k: 312	n:3380000
Cons ci ratio: 9.679206e-05	ci left: 9.978949e-01	ci right 9.979918e-01	k: 3373050	n:3380000
KS ci ratio: 6.625974e-01	ci left: 6.966278e-06	ci right 1.405666e-05	k: 34	n:3380000
TROAP   3380000 perm   4992 sec   (677 perm/sec)   p_kst 1.005917e-05   p_cons 9.979438e-01   p_joint 9.230769e-05

Joint ci ratio: 2.205069e-01	ci left: 8.294161e-05	ci right 1.037689e-04	k: 315	n:3390000
Cons ci ratio: 9.659663e-05	ci left: 9.978972e-01	ci right 9.979939e-01	k: 3383037	n:3390000
KS ci ratio: 6.625974e-01	ci left: 6.945729e-06	ci right 1.401519e-05	k: 34	n:3390000
TROAP   3390000 perm   5020 sec   (675 perm/sec)   p_kst 1.002950e-05   p_cons 9.979460e-01   p_joint 9.292035e-05

Joint ci ratio: 2.201588e-01	ci left: 8.297556e-05	ci right 1.037740e-04	k: 316	n:3400000
Cons ci ratio: 9.644380e-05	ci left: 9.978978e-01	ci right 9.979943e-01	k: 3393018	n:3400000
KS ci ratio: 6.625974e-01	ci left: 6.925300e-06	ci right 1.397397e-05	k: 34	n:3400000
TROAP   3400000 perm   5048 sec   (674 perm/sec)   p_kst 1.000000e-05   p_cons 9.979465e-01   p_joint 9.294118e-05

Joint ci ratio: 2.201589e-01	ci left: 8.273222e-05	ci right 1.034697e-04	k: 316	n:3410000
Cons ci ratio: 9.635367e-05	ci left: 9.978956e-01	ci right 9.979921e-01	k: 3402990	n:3410000
KS ci ratio: 6.625974e-01	ci left: 6.904991e-06	ci right 1.393299e-05	k: 34	n:3410000
TROAP   3410000 perm   5076 sec   (672 perm/sec)   p_kst 9.970674e-06   p_cons 9.979443e-01   p_joint 9.266862e-05

Joint ci ratio: 2.198124e-01	ci left: 8.276660e-05	ci right 1.034756e-04	k: 317	n:3420000
Cons ci ratio: 9.620200e-05	ci left: 9.978962e-01	ci right 9.979925e-01	k: 3412971	n:3420000
KS ci ratio: 6.625974e-01	ci left: 6.884801e-06	ci right 1.389225e-05	k: 34	n:3420000
TROAP   3420000 perm   5103 sec   (670 perm/sec)   p_kst 9.941520e-06   p_cons 9.979447e-01   p_joint 9.269006e-05

Joint ci ratio: 2.198125e-01	ci left: 8.252530e-05	ci right 1.031739e-04	k: 317	n:3430000
Cons ci ratio: 9.605105e-05	ci left: 9.978967e-01	ci right 9.979928e-01	k: 3422952	n:3430000
KS ci ratio: 6.625975e-01	ci left: 6.864729e-06	ci right 1.385175e-05	k: 34	n:3430000
TROAP   3430000 perm   5130 sec   (669 perm/sec)   p_kst 9.912536e-06   p_cons 9.979452e-01   p_joint 9.241983e-05

Joint ci ratio: 2.194677e-01	ci left: 8.256011e-05	ci right 1.031807e-04	k: 318	n:3440000
Cons ci ratio: 9.591439e-05	ci left: 9.978966e-01	ci right 9.979926e-01	k: 3432931	n:3440000
KS ci ratio: 6.625975e-01	ci left: 6.844773e-06	ci right 1.381148e-05	k: 34	n:3440000
TROAP   3440000 perm   5158 sec   (667 perm/sec)   p_kst 9.883721e-06   p_cons 9.979451e-01   p_joint 9.244186e-05

Joint ci ratio: 2.191245e-01	ci left: 8.259474e-05	ci right 1.031873e-04	k: 319	n:3450000
Cons ci ratio: 9.577154e-05	ci left: 9.978969e-01	ci right 9.979927e-01	k: 3442911	n:3450000
KS ci ratio: 6.625975e-01	ci left: 6.824934e-06	ci right 1.377145e-05	k: 34	n:3450000
TROAP   3450000 perm   5185 sec   (665 perm/sec)   p_kst 9.855072e-06   p_cons 9.979452e-01   p_joint 9.246377e-05

Joint ci ratio: 2.184429e-01	ci left: 8.290239e-05	ci right 1.034988e-04	k: 321	n:3460000
Cons ci ratio: 9.563607e-05	ci left: 9.978968e-01	ci right 9.979925e-01	k: 3452890	n:3460000
KS ci ratio: 6.625975e-01	ci left: 6.805208e-06	ci right 1.373165e-05	k: 34	n:3460000
TROAP   3460000 perm   5213 sec   (664 perm/sec)   p_kst 9.826590e-06   p_cons 9.979451e-01   p_joint 9.277457e-05

Joint ci ratio: 2.181045e-01	ci left: 8.293591e-05	ci right 1.035044e-04	k: 322	n:3470000
Cons ci ratio: 9.546091e-05	ci left: 9.978985e-01	ci right 9.979940e-01	k: 3462875	n:3470000
KS ci ratio: 6.625975e-01	ci left: 6.785597e-06	ci right 1.369207e-05	k: 34	n:3470000
TROAP   3470000 perm   5241 sec   (662 perm/sec)   p_kst 9.798271e-06   p_cons 9.979467e-01   p_joint 9.279539e-05

Joint ci ratio: 2.181045e-01	ci left: 8.269758e-05	ci right 1.032070e-04	k: 322	n:3480000
Cons ci ratio: 9.534012e-05	ci left: 9.978978e-01	ci right 9.979933e-01	k: 3472852	n:3480000
KS ci ratio: 6.625975e-01	ci left: 6.766098e-06	ci right 1.365273e-05	k: 34	n:3480000
TROAP   3480000 perm   5268 sec   (661 perm/sec)   p_kst 9.770115e-06   p_cons 9.979460e-01   p_joint 9.252874e-05

Joint ci ratio: 2.170985e-01	ci left: 8.327338e-05	ci right 1.038176e-04	k: 325	n:3490000
Cons ci ratio: 9.517320e-05	ci left: 9.978992e-01	ci right 9.979945e-01	k: 3482836	n:3490000
KS ci ratio: 6.625975e-01	ci left: 6.746711e-06	ci right 1.361361e-05	k: 34	n:3490000
TROAP   3490000 perm   5296 sec   (659 perm/sec)   p_kst 9.742120e-06   p_cons 9.979473e-01   p_joint 9.312321e-05

Joint ci ratio: 2.167663e-01	ci left: 8.330565e-05	ci right 1.038222e-04	k: 326	n:3500000
Cons ci ratio: 9.507339e-05	ci left: 9.978977e-01	ci right 9.979929e-01	k: 3492810	n:3500000
KS ci ratio: 6.625975e-01	ci left: 6.727434e-06	ci right 1.357471e-05	k: 34	n:3500000
TROAP   3500000 perm   5324 sec   (657 perm/sec)   p_kst 9.714286e-06   p_cons 9.979457e-01   p_joint 9.314286e-05

Joint ci ratio: 2.164356e-01	ci left: 8.333776e-05	ci right 1.038268e-04	k: 327	n:3510000
Cons ci ratio: 9.493426e-05	ci left: 9.978979e-01	ci right 9.979930e-01	k: 3502790	n:3510000
KS ci ratio: 6.625975e-01	ci left: 6.708268e-06	ci right 1.353604e-05	k: 34	n:3510000
TROAP   3510000 perm   5352 sec   (656 perm/sec)   p_kst 9.686610e-06   p_cons 9.979459e-01   p_joint 9.316239e-05

Joint ci ratio: 2.164357e-01	ci left: 8.310100e-05	ci right 1.035318e-04	k: 327	n:3520000
Cons ci ratio: 9.480887e-05	ci left: 9.978976e-01	ci right 9.979925e-01	k: 3512768	n:3520000
KS ci ratio: 6.625975e-01	ci left: 6.689210e-06	ci right 1.349759e-05	k: 34	n:3520000
TROAP   3520000 perm   5380 sec   (654 perm/sec)   p_kst 9.659091e-06   p_cons 9.979455e-01   p_joint 9.289773e-05

Joint ci ratio: 2.161065e-01	ci left: 8.313353e-05	ci right 1.035371e-04	k: 328	n:3530000
Cons ci ratio: 9.468398e-05	ci left: 9.978972e-01	ci right 9.979920e-01	k: 3522746	n:3530000
KS ci ratio: 6.625976e-01	ci left: 6.670261e-06	ci right 1.345935e-05	k: 34	n:3530000
TROAP   3530000 perm   5408 sec   (653 perm/sec)   p_kst 9.631728e-06   p_cons 9.979450e-01   p_joint 9.291785e-05

Joint ci ratio: 2.154526e-01	ci left: 8.343313e-05	ci right 1.038401e-04	k: 330	n:3540000
Cons ci ratio: 9.452702e-05	ci left: 9.978983e-01	ci right 9.979929e-01	k: 3532729	n:3540000
KS ci ratio: 6.625976e-01	ci left: 6.651418e-06	ci right 1.342133e-05	k: 34	n:3540000
TROAP   3540000 perm   5437 sec   (651 perm/sec)   p_kst 9.604520e-06   p_cons 9.979460e-01   p_joint 9.322034e-05

Joint ci ratio: 2.151279e-01	ci left: 8.346461e-05	ci right 1.038445e-04	k: 331	n:3550000
Cons ci ratio: 9.441621e-05	ci left: 9.978974e-01	ci right 9.979919e-01	k: 3542705	n:3550000
KS ci ratio: 6.533299e-01	ci left: 6.867272e-06	ci right 1.371167e-05	k: 35	n:3550000
TROAP   3550000 perm   5465 sec   (650 perm/sec)   p_kst 9.859155e-06   p_cons 9.979451e-01   p_joint 9.323944e-05

Joint ci ratio: 2.167665e-01	ci left: 8.190162e-05	ci right 1.020724e-04	k: 326	n:3560000
Cons ci ratio: 9.424766e-05	ci left: 9.978991e-01	ci right 9.979934e-01	k: 3552690	n:3560000
KS ci ratio: 6.533299e-01	ci left: 6.847982e-06	ci right 1.367316e-05	k: 35	n:3560000
TROAP   3560000 perm   5494 sec   (648 perm/sec)   p_kst 9.831461e-06   p_cons 9.979466e-01   p_joint 9.157303e-05

Joint ci ratio: 2.157789e-01	ci left: 8.246702e-05	ci right 1.026723e-04	k: 329	n:3570000
Cons ci ratio: 9.409925e-05	ci left: 9.978998e-01	ci right 9.979940e-01	k: 3562672	n:3570000
KS ci ratio: 6.533299e-01	ci left: 6.828800e-06	ci right 1.363486e-05	k: 35	n:3570000
TROAP   3570000 perm   5522 sec   (646 perm/sec)   p_kst 9.803922e-06   p_cons 9.979473e-01   p_joint 9.215686e-05

Joint ci ratio: 2.157789e-01	ci left: 8.223667e-05	ci right 1.023855e-04	k: 329	n:3580000
Cons ci ratio: 9.395794e-05	ci left: 9.979003e-01	ci right 9.979944e-01	k: 3572653	n:3580000
KS ci ratio: 6.533300e-01	ci left: 6.809725e-06	ci right 1.359677e-05	k: 35	n:3580000
TROAP   3580000 perm   5551 sec   (645 perm/sec)   p_kst 9.776536e-06   p_cons 9.979478e-01   p_joint 9.189944e-05

Joint ci ratio: 2.151280e-01	ci left: 8.253464e-05	ci right 1.026874e-04	k: 331	n:3590000
Cons ci ratio: 9.386828e-05	ci left: 9.978986e-01	ci right 9.979925e-01	k: 3582626	n:3590000
KS ci ratio: 6.533300e-01	ci left: 6.790756e-06	ci right 1.355890e-05	k: 35	n:3590000
TROAP   3590000 perm   5579 sec   (643 perm/sec)   p_kst 9.749304e-06   p_cons 9.979460e-01   p_joint 9.220056e-05

Joint ci ratio: 1.694638e-01	ci left: 1.360183e-04	ci right 1.614639e-04	k: 534	n:3600000
Cons ci ratio: 9.372802e-05	ci left: 9.978991e-01	ci right 9.979929e-01	k: 3592607	n:3600000
KS ci ratio: 6.444406e-01	ci left: 7.003887e-06	ci right 1.384419e-05	k: 36	n:3600000
TROAP   3600000 perm   5608 sec   (642 perm/sec)   p_kst 1.000000e-05   p_cons 9.979464e-01   p_joint 1.483333e-04

Joint ci ratio: 1.694638e-01	ci left: 1.356415e-04	ci right 1.610166e-04	k: 534	n:3610000
Cons ci ratio: 9.356307e-05	ci left: 9.979007e-01	ci right 9.979943e-01	k: 3602592	n:3610000
KS ci ratio: 6.444406e-01	ci left: 6.984485e-06	ci right 1.380584e-05	k: 36	n:3610000
TROAP   3610000 perm   5636 sec   (640 perm/sec)   p_kst 9.972299e-06   p_cons 9.979479e-01   p_joint 1.479224e-04

Joint ci ratio: 1.693057e-01	ci left: 1.355313e-04	ci right 1.608597e-04	k: 535	n:3620000
Cons ci ratio: 9.347455e-05	ci left: 9.978990e-01	ci right 9.979925e-01	k: 3612565	n:3620000
KS ci ratio: 6.444406e-01	ci left: 6.965191e-06	ci right 1.376770e-05	k: 36	n:3620000
TROAP   3620000 perm   5665 sec   (639 perm/sec)   p_kst 9.944751e-06   p_cons 9.979461e-01   p_joint 1.477901e-04

Joint ci ratio: 1.689907e-01	ci left: 1.356856e-04	ci right 1.609909e-04	k: 537	n:3630000
Cons ci ratio: 9.334232e-05	ci left: 9.978992e-01	ci right 9.979926e-01	k: 3622545	n:3630000
KS ci ratio: 6.444407e-01	ci left: 6.946003e-06	ci right 1.372977e-05	k: 36	n:3630000
TROAP   3630000 perm   5694 sec   (637 perm/sec)   p_kst 9.917355e-06   p_cons 9.979463e-01   p_joint 1.479339e-04

Joint ci ratio: 1.694639e-01	ci left: 1.345235e-04	ci right 1.596895e-04	k: 534	n:3640000
Cons ci ratio: 9.322313e-05	ci left: 9.978988e-01	ci right 9.979921e-01	k: 3632523	n:3640000
KS ci ratio: 6.444407e-01	ci left: 6.926921e-06	ci right 1.369205e-05	k: 36	n:3640000
TROAP   3640000 perm   5723 sec   (636 perm/sec)   p_kst 9.890110e-06   p_cons 9.979459e-01   p_joint 1.467033e-04

Joint ci ratio: 1.722227e-01	ci left: 1.296965e-04	ci right 1.543956e-04	k: 517	n:3650000
Cons ci ratio: 9.309818e-05	ci left: 9.978988e-01	ci right 9.979919e-01	k: 3642502	n:3650000
KS ci ratio: 6.444407e-01	ci left: 6.907943e-06	ci right 1.365454e-05	k: 36	n:3650000
TROAP   3650000 perm   5752 sec   (635 perm/sec)   p_kst 9.863014e-06   p_cons 9.979458e-01   p_joint 1.416438e-04

Joint ci ratio: 1.718911e-01	ci left: 1.298651e-04	ci right 1.545437e-04	k: 519	n:3660000
Cons ci ratio: 9.297372e-05	ci left: 9.978987e-01	ci right 9.979918e-01	k: 3652481	n:3660000
KS ci ratio: 6.359046e-01	ci left: 7.117883e-06	ci right 1.393430e-05	k: 37	n:3660000
TROAP   3660000 perm   5781 sec   (633 perm/sec)   p_kst 1.010929e-05   p_cons 9.979456e-01   p_joint 1.418033e-04

Joint ci ratio: 1.715615e-01	ci left: 1.300328e-04	ci right 1.546910e-04	k: 521	n:3670000
Cons ci ratio: 9.289911e-05	ci left: 9.978964e-01	ci right 9.979894e-01	k: 3662452	n:3670000
KS ci ratio: 6.276989e-01	ci left: 7.327275e-06	ci right 1.421195e-05	k: 38	n:3670000
TROAP   3670000 perm   5811 sec   (632 perm/sec)   p_kst 1.035422e-05   p_cons 9.979433e-01   p_joint 1.419619e-04

Joint ci ratio: 1.715615e-01	ci left: 1.296794e-04	ci right 1.542706e-04	k: 521	n:3680000
Cons ci ratio: 9.280614e-05	ci left: 9.978950e-01	ci right 9.979879e-01	k: 3672426	n:3680000
KS ci ratio: 6.276990e-01	ci left: 7.307364e-06	ci right 1.417333e-05	k: 38	n:3680000
TROAP   3680000 perm   5840 sec   (630 perm/sec)   p_kst 1.032609e-05   p_cons 9.979418e-01   p_joint 1.415761e-04

Joint ci ratio: 1.712338e-01	ci left: 1.298468e-04	ci right 1.544178e-04	k: 523	n:3690000
Cons ci ratio: 9.273174e-05	ci left: 9.978928e-01	ci right 9.979856e-01	k: 3682397	n:3690000
KS ci ratio: 6.276990e-01	ci left: 7.287561e-06	ci right 1.413492e-05	k: 38	n:3690000
TROAP   3690000 perm   5869 sec   (629 perm/sec)   p_kst 1.029810e-05   p_cons 9.979396e-01   p_joint 1.417344e-04

Joint ci ratio: 1.712338e-01	ci left: 1.294958e-04	ci right 1.540004e-04	k: 523	n:3700000
Cons ci ratio: 9.258439e-05	ci left: 9.978938e-01	ci right 9.979865e-01	k: 3692380	n:3700000
KS ci ratio: 6.276990e-01	ci left: 7.267864e-06	ci right 1.409672e-05	k: 38	n:3700000
TROAP   3700000 perm   5899 sec   (627 perm/sec)   p_kst 1.027027e-05   p_cons 9.979405e-01   p_joint 1.413514e-04

Joint ci ratio: 1.709080e-01	ci left: 1.296628e-04	ci right 1.541475e-04	k: 525	n:3710000
Cons ci ratio: 9.244378e-05	ci left: 9.978946e-01	ci right 9.979871e-01	k: 3702362	n:3710000
KS ci ratio: 6.198030e-01	ci left: 7.475162e-06	ci right 1.437040e-05	k: 39	n:3710000
TROAP   3710000 perm   5928 sec   (626 perm/sec)   p_kst 1.051213e-05   p_cons 9.979412e-01   p_joint 1.415094e-04

Joint ci ratio: 1.717263e-01	ci left: 1.280278e-04	ci right 1.523314e-04	k: 520	n:3720000
Cons ci ratio: 9.235211e-05	ci left: 9.978932e-01	ci right 9.979856e-01	k: 3712336	n:3720000
KS ci ratio: 6.198030e-01	ci left: 7.455067e-06	ci right 1.433177e-05	k: 39	n:3720000
TROAP   3720000 perm   5957 sec   (624 perm/sec)   p_kst 1.048387e-05   p_cons 9.979398e-01   p_joint 1.397849e-04

Joint ci ratio: 1.715617e-01	ci left: 1.279411e-04	ci right 1.522026e-04	k: 521	n:3730000
Cons ci ratio: 9.225465e-05	ci left: 9.978921e-01	ci right 9.979844e-01	k: 3722311	n:3730000
KS ci ratio: 6.198030e-01	ci left: 7.435081e-06	ci right 1.429335e-05	k: 39	n:3730000
TROAP   3730000 perm   5987 sec   (623 perm/sec)   p_kst 1.045576e-05   p_cons 9.979386e-01   p_joint 1.396783e-04

Joint ci ratio: 1.732293e-01	ci left: 1.250406e-04	ci right 1.490067e-04	k: 511	n:3740000
Cons ci ratio: 9.213353e-05	ci left: 9.978920e-01	ci right 9.979842e-01	k: 3732290	n:3740000
KS ci ratio: 6.198030e-01	ci left: 7.415201e-06	ci right 1.425513e-05	k: 39	n:3740000
TROAP   3740000 perm   6016 sec   (622 perm/sec)   p_kst 1.042781e-05   p_cons 9.979385e-01   p_joint 1.366310e-04

Joint ci ratio: 1.740815e-01	ci left: 1.234317e-04	ci right 1.472181e-04	k: 506	n:3750000
Cons ci ratio: 9.201288e-05	ci left: 9.978920e-01	ci right 9.979841e-01	k: 3742269	n:3750000
KS ci ratio: 6.198030e-01	ci left: 7.395427e-06	ci right 1.421712e-05	k: 39	n:3750000
TROAP   3750000 perm   6046 sec   (620 perm/sec)   p_kst 1.040000e-05   p_cons 9.979384e-01   p_joint 1.349333e-04

Joint ci ratio: 1.740816e-01	ci left: 1.231034e-04	ci right 1.468266e-04	k: 506	n:3760000
Cons ci ratio: 9.187489e-05	ci left: 9.978927e-01	ci right 9.979847e-01	k: 3752251	n:3760000
KS ci ratio: 6.198030e-01	ci left: 7.375758e-06	ci right 1.417930e-05	k: 39	n:3760000
TROAP   3760000 perm   6076 sec   (619 perm/sec)   p_kst 1.037234e-05   p_cons 9.979391e-01   p_joint 1.345745e-04

Joint ci ratio: 1.735688e-01	ci left: 1.235380e-04	ci right 1.472674e-04	k: 509	n:3770000
Cons ci ratio: 9.176709e-05	ci left: 9.978922e-01	ci right 9.979840e-01	k: 3762228	n:3770000
KS ci ratio: 6.121977e-01	ci left: 7.580007e-06	ci right 1.444789e-05	k: 40	n:3770000
TROAP   3770000 perm   6106 sec   (617 perm/sec)   p_kst 1.061008e-05   p_cons 9.979385e-01   p_joint 1.350133e-04

Joint ci ratio: 1.730605e-01	ci left: 1.239705e-04	ci right 1.477059e-04	k: 512	n:3780000
Cons ci ratio: 9.165965e-05	ci left: 9.978916e-01	ci right 9.979833e-01	k: 3772205	n:3780000
KS ci ratio: 6.121977e-01	ci left: 7.559954e-06	ci right 1.440967e-05	k: 40	n:3780000
TROAP   3780000 perm   6137 sec   (616 perm/sec)   p_kst 1.058201e-05   p_cons 9.979378e-01   p_joint 1.354497e-04

Joint ci ratio: 1.730605e-01	ci left: 1.236434e-04	ci right 1.473162e-04	k: 512	n:3790000
Cons ci ratio: 9.156432e-05	ci left: 9.978905e-01	ci right 9.979821e-01	k: 3782180	n:3790000
KS ci ratio: 6.121978e-01	ci left: 7.540007e-06	ci right 1.437165e-05	k: 40	n:3790000
TROAP   3790000 perm   6168 sec   (614 perm/sec)   p_kst 1.055409e-05   p_cons 9.979367e-01   p_joint 1.350923e-04

Joint ci ratio: 1.728921e-01	ci left: 1.235697e-04	ci right 1.472030e-04	k: 513	n:3800000
Cons ci ratio: 9.146342e-05	ci left: 9.978896e-01	ci right 9.979812e-01	k: 3792156	n:3800000
KS ci ratio: 6.121978e-01	ci left: 7.520165e-06	ci right 1.433383e-05	k: 40	n:3800000
TROAP   3800000 perm   6199 sec   (613 perm/sec)   p_kst 1.052632e-05   p_cons 9.979358e-01   p_joint 1.350000e-04

Joint ci ratio: 1.725567e-01	ci left: 1.237477e-04	ci right 1.473643e-04	k: 515	n:3810000
Cons ci ratio: 9.133955e-05	ci left: 9.978899e-01	ci right 9.979813e-01	k: 3802136	n:3810000
KS ci ratio: 6.121978e-01	ci left: 7.500427e-06	ci right 1.429621e-05	k: 40	n:3810000
TROAP   3810000 perm   6230 sec   (612 perm/sec)   p_kst 1.049869e-05   p_cons 9.979360e-01   p_joint 1.351706e-04

Joint ci ratio: 1.723897e-01	ci left: 1.236742e-04	ci right 1.472516e-04	k: 516	n:3820000
Cons ci ratio: 9.119301e-05	ci left: 9.978912e-01	ci right 9.979824e-01	k: 3812120	n:3820000
KS ci ratio: 6.121978e-01	ci left: 7.480792e-06	ci right 1.425878e-05	k: 40	n:3820000
TROAP   3820000 perm   6261 sec   (610 perm/sec)   p_kst 1.047120e-05   p_cons 9.979372e-01   p_joint 1.350785e-04

Joint ci ratio: 1.728922e-01	ci left: 1.226018e-04	ci right 1.460500e-04	k: 513	n:3830000
Cons ci ratio: 9.103558e-05	ci left: 9.978930e-01	ci right 9.979841e-01	k: 3822106	n:3830000
KS ci ratio: 6.121978e-01	ci left: 7.461260e-06	ci right 1.422155e-05	k: 40	n:3830000
TROAP   3830000 perm   6291 sec   (609 perm/sec)   p_kst 1.044386e-05   p_cons 9.979389e-01   p_joint 1.339426e-04

Joint ci ratio: 1.727242e-01	ci left: 1.225317e-04	ci right 1.459413e-04	k: 514	n:3840000
Cons ci ratio: 9.091919e-05	ci left: 9.978929e-01	ci right 9.979839e-01	k: 3832085	n:3840000
KS ci ratio: 6.121978e-01	ci left: 7.441829e-06	ci right 1.418452e-05	k: 40	n:3840000
TROAP   3840000 perm   6321 sec   (607 perm/sec)   p_kst 1.041667e-05   p_cons 9.979388e-01   p_joint 1.338542e-04

Joint ci ratio: 1.727243e-01	ci left: 1.222134e-04	ci right 1.455623e-04	k: 514	n:3850000
Cons ci ratio: 9.078605e-05	ci left: 9.978937e-01	ci right 9.979845e-01	k: 3842067	n:3850000
KS ci ratio: 6.121978e-01	ci left: 7.422500e-06	ci right 1.414767e-05	k: 40	n:3850000
TROAP   3850000 perm   6352 sec   (606 perm/sec)   p_kst 1.038961e-05   p_cons 9.979395e-01   p_joint 1.335065e-04

Joint ci ratio: 1.727243e-01	ci left: 1.218968e-04	ci right 1.451852e-04	k: 514	n:3860000
Cons ci ratio: 9.065919e-05	ci left: 9.978942e-01	ci right 9.979849e-01	k: 3852048	n:3860000
KS ci ratio: 6.121978e-01	ci left: 7.403271e-06	ci right 1.411102e-05	k: 40	n:3860000
TROAP   3860000 perm   6383 sec   (605 perm/sec)   p_kst 1.036269e-05   p_cons 9.979399e-01   p_joint 1.331606e-04

Joint ci ratio: 1.761796e-01	ci left: 1.166395e-04	ci right 1.394167e-04	k: 494	n:3870000
Cons ci ratio: 9.058405e-05	ci left: 9.978923e-01	ci right 9.979829e-01	k: 3862020	n:3870000
KS ci ratio: 6.121978e-01	ci left: 7.384141e-06	ci right 1.407456e-05	k: 40	n:3870000
TROAP   3870000 perm   6414 sec   (603 perm/sec)   p_kst 1.033592e-05   p_cons 9.979380e-01   p_joint 1.276486e-04

Joint ci ratio: 1.761796e-01	ci left: 1.163389e-04	ci right 1.390574e-04	k: 494	n:3880000
Cons ci ratio: 9.046938e-05	ci left: 9.978922e-01	ci right 9.979828e-01	k: 3871999	n:3880000
KS ci ratio: 6.121978e-01	ci left: 7.365109e-06	ci right 1.403828e-05	k: 40	n:3880000
TROAP   3880000 perm   6445 sec   (602 perm/sec)   p_kst 1.030928e-05   p_cons 9.979379e-01   p_joint 1.273196e-04

Joint ci ratio: 1.760020e-01	ci left: 1.162855e-04	ci right 1.389683e-04	k: 495	n:3890000
Cons ci ratio: 9.033822e-05	ci left: 9.978930e-01	ci right 9.979834e-01	k: 3881981	n:3890000
KS ci ratio: 6.048658e-01	ci left: 7.563586e-06	ci right 1.429846e-05	k: 41	n:3890000
TROAP   3890000 perm   6477 sec   (601 perm/sec)   p_kst 1.053985e-05   p_cons 9.979386e-01   p_joint 1.272494e-04

Joint ci ratio: 1.756482e-01	ci left: 1.164776e-04	ci right 1.391473e-04	k: 497	n:3900000
Cons ci ratio: 9.024134e-05	ci left: 9.978922e-01	ci right 9.979825e-01	k: 3891957	n:3900000
KS ci ratio: 5.977910e-01	ci left: 7.761525e-06	ci right 1.455684e-05	k: 42	n:3900000
TROAP   3900000 perm   6507 sec   (599 perm/sec)   p_kst 1.076923e-05   p_cons 9.979377e-01   p_joint 1.274359e-04

Joint ci ratio: 1.751214e-01	ci left: 1.169133e-04	ci right 1.395923e-04	k: 500	n:3910000
Cons ci ratio: 9.015036e-05	ci left: 9.978911e-01	ci right 9.979813e-01	k: 3901932	n:3910000
KS ci ratio: 5.977910e-01	ci left: 7.741674e-06	ci right 1.451961e-05	k: 42	n:3910000
TROAP   3910000 perm   6539 sec   (598 perm/sec)   p_kst 1.074169e-05   p_cons 9.979366e-01   p_joint 1.278772e-04

Joint ci ratio: 1.745994e-01	ci left: 1.173469e-04	ci right 1.400350e-04	k: 503	n:3920000
Cons ci ratio: 9.004848e-05	ci left: 9.978905e-01	ci right 9.979807e-01	k: 3911909	n:3920000
KS ci ratio: 5.977910e-01	ci left: 7.721925e-06	ci right 1.448257e-05	k: 42	n:3920000
TROAP   3920000 perm   6570 sec   (597 perm/sec)   p_kst 1.071429e-05   p_cons 9.979360e-01   p_joint 1.283163e-04

Joint ci ratio: 1.745995e-01	ci left: 1.170483e-04	ci right 1.396787e-04	k: 503	n:3930000
Cons ci ratio: 8.994138e-05	ci left: 9.978903e-01	ci right 9.979803e-01	k: 3921887	n:3930000
KS ci ratio: 5.977910e-01	ci left: 7.702277e-06	ci right 1.444572e-05	k: 42	n:3930000
TROAP   3930000 perm   6601 sec   (595 perm/sec)   p_kst 1.068702e-05   p_cons 9.979356e-01   p_joint 1.279898e-04

Joint ci ratio: 1.742540e-01	ci left: 1.172367e-04	ci right 1.398539e-04	k: 505	n:3940000
Cons ci ratio: 8.980146e-05	ci left: 9.978915e-01	ci right 9.979814e-01	k: 3931871	n:3940000
KS ci ratio: 5.977911e-01	ci left: 7.682728e-06	ci right 1.440906e-05	k: 42	n:3940000
TROAP   3940000 perm   6633 sec   (594 perm/sec)   p_kst 1.065990e-05   p_cons 9.979368e-01   p_joint 1.281726e-04

Joint ci ratio: 1.739107e-01	ci left: 1.174241e-04	ci right 1.400282e-04	k: 507	n:3950000
Cons ci ratio: 8.965664e-05	ci left: 9.978930e-01	ci right 9.979827e-01	k: 3941856	n:3950000
KS ci ratio: 5.977911e-01	ci left: 7.663278e-06	ci right 1.437258e-05	k: 42	n:3950000
TROAP   3950000 perm   6664 sec   (593 perm/sec)   p_kst 1.063291e-05   p_cons 9.979382e-01   p_joint 1.283544e-04

Joint ci ratio: 1.737398e-01	ci left: 1.173691e-04	ci right 1.399381e-04	k: 508	n:3960000
Cons ci ratio: 8.953446e-05	ci left: 9.978935e-01	ci right 9.979831e-01	k: 3951837	n:3960000
KS ci ratio: 5.977911e-01	ci left: 7.643926e-06	ci right 1.433629e-05	k: 42	n:3960000
TROAP   3960000 perm   6695 sec   (591 perm/sec)   p_kst 1.060606e-05   p_cons 9.979386e-01   p_joint 1.282828e-04

Joint ci ratio: 1.735693e-01	ci left: 1.173144e-04	ci right 1.398485e-04	k: 509	n:3970000
Cons ci ratio: 8.942920e-05	ci left: 9.978932e-01	ci right 9.979827e-01	k: 3961815	n:3970000
KS ci ratio: 5.977911e-01	ci left: 7.624672e-06	ci right 1.430017e-05	k: 42	n:3970000
TROAP   3970000 perm   6726 sec   (590 perm/sec)   p_kst 1.057935e-05   p_cons 9.979383e-01   p_joint 1.282116e-04

Joint ci ratio: 1.733994e-01	ci left: 1.172600e-04	ci right 1.397592e-04	k: 510	n:3980000
Cons ci ratio: 8.930795e-05	ci left: 9.978936e-01	ci right 9.979830e-01	k: 3971796	n:3980000
KS ci ratio: 5.977911e-01	ci left: 7.605514e-06	ci right 1.426424e-05	k: 42	n:3980000
TROAP   3980000 perm   6758 sec   (589 perm/sec)   p_kst 1.055276e-05   p_cons 9.979387e-01   p_joint 1.281407e-04

Joint ci ratio: 1.732300e-01	ci left: 1.172059e-04	ci right 1.396705e-04	k: 511	n:3990000
Cons ci ratio: 8.921979e-05	ci left: 9.978926e-01	ci right 9.979819e-01	k: 3981771	n:3990000
KS ci ratio: 5.977911e-01	ci left: 7.586453e-06	ci right 1.422849e-05	k: 42	n:3990000
TROAP   3990000 perm   6790 sec   (588 perm/sec)   p_kst 1.052632e-05   p_cons 9.979376e-01   p_joint 1.280702e-04

Joint ci ratio: 1.740823e-01	ci left: 1.157172e-04	ci right 1.380170e-04	k: 506	n:4000000
Cons ci ratio: 8.910480e-05	ci left: 9.978928e-01	ci right 9.979820e-01	k: 3991751	n:4000000
KS ci ratio: 5.977911e-01	ci left: 7.567487e-06	ci right 1.419292e-05	k: 42	n:4000000
TROAP   4000000 perm   6821 sec   (586 perm/sec)   p_kst 1.050000e-05   p_cons 9.979377e-01   p_joint 1.265000e-04

Joint ci ratio: 1.737399e-01	ci left: 1.159057e-04	ci right 1.381933e-04	k: 508	n:4010000
Cons ci ratio: 8.903338e-05	ci left: 9.978910e-01	ci right 9.979801e-01	k: 4001723	n:4010000
KS ci ratio: 5.909589e-01	ci left: 7.760438e-06	ci right 1.444404e-05	k: 43	n:4010000
TROAP   4010000 perm   6853 sec   (585 perm/sec)   p_kst 1.072319e-05   p_cons 9.979359e-01   p_joint 1.266833e-04

Joint ci ratio: 1.735695e-01	ci left: 1.158553e-04	ci right 1.381091e-04	k: 509	n:4020000
Cons ci ratio: 8.891912e-05	ci left: 9.978912e-01	ci right 9.979802e-01	k: 4011703	n:4020000
KS ci ratio: 5.909589e-01	ci left: 7.741133e-06	ci right 1.440811e-05	k: 43	n:4020000
TROAP   4020000 perm   6886 sec   (584 perm/sec)   p_kst 1.069652e-05   p_cons 9.979361e-01   p_joint 1.266169e-04

Joint ci ratio: 1.735695e-01	ci left: 1.155678e-04	ci right 1.377664e-04	k: 509	n:4030000
Cons ci ratio: 8.882134e-05	ci left: 9.978907e-01	ci right 9.979796e-01	k: 4021680	n:4030000
KS ci ratio: 5.909589e-01	ci left: 7.721924e-06	ci right 1.437236e-05	k: 43	n:4030000
TROAP   4030000 perm   6918 sec   (583 perm/sec)   p_kst 1.066998e-05   p_cons 9.979355e-01   p_joint 1.263027e-04

Joint ci ratio: 1.733996e-01	ci left: 1.155185e-04	ci right 1.376836e-04	k: 510	n:4040000
Cons ci ratio: 8.871322e-05	ci left: 9.978907e-01	ci right 9.979794e-01	k: 4031659	n:4040000
KS ci ratio: 5.909589e-01	ci left: 7.702811e-06	ci right 1.433678e-05	k: 43	n:4040000
TROAP   4040000 perm   6950 sec   (581 perm/sec)   p_kst 1.064356e-05   p_cons 9.979354e-01   p_joint 1.262376e-04

Joint ci ratio: 1.733996e-01	ci left: 1.152333e-04	ci right 1.373437e-04	k: 510	n:4050000
Cons ci ratio: 8.858957e-05	ci left: 9.978914e-01	ci right 9.979800e-01	k: 4041641	n:4050000
KS ci ratio: 5.909590e-01	ci left: 7.683791e-06	ci right 1.430139e-05	k: 43	n:4050000
TROAP   4050000 perm   6982 sec   (580 perm/sec)   p_kst 1.061728e-05   p_cons 9.979360e-01   p_joint 1.259259e-04

Joint ci ratio: 1.733997e-01	ci left: 1.149495e-04	ci right 1.370054e-04	k: 510	n:4060000
Cons ci ratio: 8.847172e-05	ci left: 9.978918e-01	ci right 9.979804e-01	k: 4051622	n:4060000
KS ci ratio: 5.909590e-01	ci left: 7.664866e-06	ci right 1.426616e-05	k: 43	n:4060000
TROAP   4060000 perm   7014 sec   (579 perm/sec)   p_kst 1.059113e-05   p_cons 9.979365e-01   p_joint 1.256158e-04

Joint ci ratio: 1.732302e-01	ci left: 1.149021e-04	ci right 1.369251e-04	k: 511	n:4070000
Cons ci ratio: 8.840176e-05	ci left: 9.978901e-01	ci right 9.979785e-01	k: 4061594	n:4070000
KS ci ratio: 5.909590e-01	ci left: 7.646033e-06	ci right 1.423111e-05	k: 43	n:4070000
TROAP   4070000 perm   7046 sec   (578 perm/sec)   p_kst 1.056511e-05   p_cons 9.979346e-01   p_joint 1.255528e-04

Joint ci ratio: 1.758253e-01	ci left: 1.111046e-04	ci right 1.327526e-04	k: 496	n:4080000
Cons ci ratio: 8.825841e-05	ci left: 9.978918e-01	ci right 9.979801e-01	k: 4071580	n:4080000
KS ci ratio: 5.909590e-01	ci left: 7.627293e-06	ci right 1.419623e-05	k: 43	n:4080000
TROAP   4080000 perm   7078 sec   (576 perm/sec)   p_kst 1.053922e-05   p_cons 9.979363e-01   p_joint 1.215686e-04

Joint ci ratio: 1.756487e-01	ci left: 1.110666e-04	ci right 1.326833e-04	k: 497	n:4090000
Cons ci ratio: 8.818895e-05	ci left: 9.978900e-01	ci right 9.979782e-01	k: 4081552	n:4090000
KS ci ratio: 5.909590e-01	ci left: 7.608644e-06	ci right 1.416152e-05	k: 43	n:4090000
TROAP   4090000 perm   7110 sec   (575 perm/sec)   p_kst 1.051345e-05   p_cons 9.979345e-01   p_joint 1.215159e-04

Joint ci ratio: 1.756487e-01	ci left: 1.107958e-04	ci right 1.323597e-04	k: 497	n:4100000
Cons ci ratio: 8.806228e-05	ci left: 9.978910e-01	ci right 9.979791e-01	k: 4091535	n:4100000
KS ci ratio: 5.909590e-01	ci left: 7.590086e-06	ci right 1.412698e-05	k: 43	n:4100000
TROAP   4100000 perm   7142 sec   (574 perm/sec)   p_kst 1.048780e-05   p_cons 9.979354e-01   p_joint 1.212195e-04

Joint ci ratio: 1.752970e-01	ci left: 1.109914e-04	ci right 1.325456e-04	k: 499	n:4110000
Cons ci ratio: 8.797248e-05	ci left: 9.978902e-01	ci right 9.979782e-01	k: 4101511	n:4110000
KS ci ratio: 5.909590e-01	ci left: 7.571619e-06	ci right 1.409261e-05	k: 43	n:4110000
TROAP   4110000 perm   7175 sec   (573 perm/sec)   p_kst 1.046229e-05   p_cons 9.979345e-01   p_joint 1.214112e-04

Joint ci ratio: 1.752971e-01	ci left: 1.107220e-04	ci right 1.322239e-04	k: 499	n:4120000
Cons ci ratio: 8.787777e-05	ci left: 9.978897e-01	ci right 9.979776e-01	k: 4111488	n:4120000
KS ci ratio: 5.909590e-01	ci left: 7.553241e-06	ci right 1.405840e-05	k: 43	n:4120000
TROAP   4120000 perm   7208 sec   (572 perm/sec)   p_kst 1.043689e-05   p_cons 9.979340e-01   p_joint 1.211165e-04

Joint ci ratio: 1.752971e-01	ci left: 1.104539e-04	ci right 1.319037e-04	k: 499	n:4130000
Cons ci ratio: 8.775760e-05	ci left: 9.978904e-01	ci right 9.979782e-01	k: 4121470	n:4130000
KS ci ratio: 5.909590e-01	ci left: 7.534953e-06	ci right 1.402436e-05	k: 43	n:4130000
TROAP   4130000 perm   7240 sec   (570 perm/sec)   p_kst 1.041162e-05   p_cons 9.979346e-01   p_joint 1.208232e-04

Joint ci ratio: 1.768966e-01	ci left: 1.081090e-04	ci right 1.293155e-04	k: 490	n:4140000
Cons ci ratio: 8.765845e-05	ci left: 9.978901e-01	ci right 9.979778e-01	k: 4131448	n:4140000
KS ci ratio: 5.843559e-01	ci left: 7.722345e-06	ci right 1.426759e-05	k: 44	n:4140000
TROAP   4140000 perm   7273 sec   (569 perm/sec)   p_kst 1.062802e-05   p_cons 9.979343e-01   p_joint 1.183575e-04

Joint ci ratio: 1.768966e-01	ci left: 1.078485e-04	ci right 1.290039e-04	k: 490	n:4150000
Cons ci ratio: 8.755451e-05	ci left: 9.978901e-01	ci right 9.979777e-01	k: 4141427	n:4150000
KS ci ratio: 5.843559e-01	ci left: 7.703737e-06	ci right 1.423321e-05	k: 44	n:4150000
TROAP   4150000 perm   7305 sec   (568 perm/sec)   p_kst 1.060241e-05   p_cons 9.979342e-01   p_joint 1.180723e-04

Joint ci ratio: 1.792863e-01	ci left: 1.046035e-04	ci right 1.254297e-04	k: 477	n:4160000
Cons ci ratio: 8.743056e-05	ci left: 9.978910e-01	ci right 9.979785e-01	k: 4151410	n:4160000
KS ci ratio: 5.843559e-01	ci left: 7.685219e-06	ci right 1.419900e-05	k: 44	n:4160000
TROAP   4160000 perm   7338 sec   (567 perm/sec)   p_kst 1.057692e-05   p_cons 9.979351e-01   p_joint 1.146635e-04

Joint ci ratio: 1.792863e-01	ci left: 1.043527e-04	ci right 1.251289e-04	k: 477	n:4170000
Cons ci ratio: 8.732743e-05	ci left: 9.978910e-01	ci right 9.979784e-01	k: 4161389	n:4170000
KS ci ratio: 5.843559e-01	ci left: 7.666789e-06	ci right 1.416495e-05	k: 44	n:4170000
TROAP   4170000 perm   7371 sec   (566 perm/sec)   p_kst 1.055156e-05   p_cons 9.979350e-01   p_joint 1.143885e-04

Joint ci ratio: 1.792864e-01	ci left: 1.041030e-04	ci right 1.248295e-04	k: 477	n:4180000
Cons ci ratio: 8.721455e-05	ci left: 9.978914e-01	ci right 9.979787e-01	k: 4171370	n:4180000
KS ci ratio: 5.843559e-01	ci left: 7.648447e-06	ci right 1.413106e-05	k: 44	n:4180000
TROAP   4180000 perm   7404 sec   (565 perm/sec)   p_kst 1.052632e-05   p_cons 9.979354e-01   p_joint 1.141148e-04

Joint ci ratio: 1.792864e-01	ci left: 1.038546e-04	ci right 1.245316e-04	k: 477	n:4190000
Cons ci ratio: 8.709705e-05	ci left: 9.978921e-01	ci right 9.979793e-01	k: 4181352	n:4190000
KS ci ratio: 5.843559e-01	ci left: 7.630193e-06	ci right 1.409734e-05	k: 44	n:4190000
TROAP   4190000 perm   7437 sec   (563 perm/sec)   p_kst 1.050119e-05   p_cons 9.979360e-01   p_joint 1.138425e-04

Joint ci ratio: 1.790991e-01	ci left: 1.038347e-04	ci right 1.244839e-04	k: 478	n:4200000
Cons ci ratio: 8.701018e-05	ci left: 9.978914e-01	ci right 9.979784e-01	k: 4191328	n:4200000
KS ci ratio: 5.843559e-01	ci left: 7.612026e-06	ci right 1.406377e-05	k: 44	n:4200000
TROAP   4200000 perm   7471 sec   (562 perm/sec)   p_kst 1.047619e-05   p_cons 9.979352e-01   p_joint 1.138095e-04

Joint ci ratio: 1.790992e-01	ci left: 1.035881e-04	ci right 1.241882e-04	k: 478	n:4210000
Cons ci ratio: 8.693858e-05	ci left: 9.978899e-01	ci right 9.979769e-01	k: 4201301	n:4210000
KS ci ratio: 5.843559e-01	ci left: 7.593945e-06	ci right 1.403037e-05	k: 44	n:4210000
TROAP   4210000 perm   7505 sec   (561 perm/sec)   p_kst 1.045131e-05   p_cons 9.979337e-01   p_joint 1.135392e-04

Joint ci ratio: 1.789125e-01	ci left: 1.035690e-04	ci right 1.241415e-04	k: 479	n:4220000
Cons ci ratio: 8.686711e-05	ci left: 9.978884e-01	ci right 9.979753e-01	k: 4211274	n:4220000
KS ci ratio: 5.843559e-01	ci left: 7.575950e-06	ci right 1.399712e-05	k: 44	n:4220000
TROAP   4220000 perm   7539 sec   (560 perm/sec)   p_kst 1.042654e-05   p_cons 9.979322e-01   p_joint 1.135071e-04

Joint ci ratio: 1.789125e-01	ci left: 1.033241e-04	ci right 1.238480e-04	k: 479	n:4230000
Cons ci ratio: 8.675105e-05	ci left: 9.978891e-01	ci right 9.979759e-01	k: 4221256	n:4230000
KS ci ratio: 5.843559e-01	ci left: 7.558040e-06	ci right 1.396403e-05	k: 44	n:4230000
TROAP   4230000 perm   7573 sec   (559 perm/sec)   p_kst 1.040189e-05   p_cons 9.979329e-01   p_joint 1.132388e-04

Joint ci ratio: 1.783560e-01	ci left: 1.037564e-04	ci right 1.242951e-04	k: 482	n:4240000
Cons ci ratio: 8.664535e-05	ci left: 9.978893e-01	ci right 9.979760e-01	k: 4231236	n:4240000
KS ci ratio: 5.843559e-01	ci left: 7.540214e-06	ci right 1.393109e-05	k: 44	n:4240000
TROAP   4240000 perm   7606 sec   (557 perm/sec)   p_kst 1.037736e-05   p_cons 9.979330e-01   p_joint 1.136792e-04

Joint ci ratio: 1.778046e-01	ci left: 1.041866e-04	ci right 1.247399e-04	k: 485	n:4250000
Cons ci ratio: 8.655484e-05	ci left: 9.978888e-01	ci right 9.979754e-01	k: 4241213	n:4250000
KS ci ratio: 5.843559e-01	ci left: 7.522473e-06	ci right 1.389832e-05	k: 44	n:4250000
TROAP   4250000 perm   7639 sec   (556 perm/sec)   p_kst 1.035294e-05   p_cons 9.979325e-01   p_joint 1.141176e-04

Joint ci ratio: 1.776220e-01	ci left: 1.041664e-04	ci right 1.246923e-04	k: 486	n:4260000
Cons ci ratio: 8.644494e-05	ci left: 9.978893e-01	ci right 9.979758e-01	k: 4251194	n:4260000
KS ci ratio: 5.843559e-01	ci left: 7.504814e-06	ci right 1.386569e-05	k: 44	n:4260000
TROAP   4260000 perm   7673 sec   (555 perm/sec)   p_kst 1.032864e-05   p_cons 9.979329e-01   p_joint 1.140845e-04

Joint ci ratio: 1.774399e-01	ci left: 1.041462e-04	ci right 1.246448e-04	k: 487	n:4270000
Cons ci ratio: 8.633056e-05	ci left: 9.978900e-01	ci right 9.979763e-01	k: 4261176	n:4270000
KS ci ratio: 5.843560e-01	ci left: 7.487239e-06	ci right 1.383322e-05	k: 44	n:4270000
TROAP   4270000 perm   7707 sec   (554 perm/sec)   p_kst 1.030445e-05   p_cons 9.979335e-01   p_joint 1.140515e-04

Joint ci ratio: 1.778047e-01	ci left: 1.034564e-04	ci right 1.238656e-04	k: 485	n:4280000
Cons ci ratio: 8.619707e-05	ci left: 9.978916e-01	ci right 9.979778e-01	k: 4271162	n:4280000
KS ci ratio: 5.843560e-01	ci left: 7.469745e-06	ci right 1.380090e-05	k: 44	n:4280000
TROAP   4280000 perm   7741 sec   (553 perm/sec)   p_kst 1.028037e-05   p_cons 9.979350e-01   p_joint 1.133178e-04

Joint ci ratio: 1.778047e-01	ci left: 1.032152e-04	ci right 1.235768e-04	k: 485	n:4290000
Cons ci ratio: 8.610312e-05	ci left: 9.978913e-01	ci right 9.979775e-01	k: 4281140	n:4290000
KS ci ratio: 5.843560e-01	ci left: 7.452333e-06	ci right 1.376873e-05	k: 44	n:4290000
TROAP   4290000 perm   7776 sec   (552 perm/sec)   p_kst 1.025641e-05   p_cons 9.979347e-01   p_joint 1.130536e-04

Joint ci ratio: 1.774400e-01	ci left: 1.034196e-04	ci right 1.237752e-04	k: 487	n:4300000
Cons ci ratio: 8.597064e-05	ci left: 9.978929e-01	ci right 9.979790e-01	k: 4291126	n:4300000
KS ci ratio: 5.843560e-01	ci left: 7.435002e-06	ci right 1.373671e-05	k: 44	n:4300000
TROAP   4300000 perm   7809 sec   (551 perm/sec)   p_kst 1.023256e-05   p_cons 9.979363e-01   p_joint 1.132558e-04

Joint ci ratio: 1.772585e-01	ci left: 1.034014e-04	ci right 1.237303e-04	k: 488	n:4310000
Cons ci ratio: 8.584357e-05	ci left: 9.978943e-01	ci right 9.979802e-01	k: 4301111	n:4310000
KS ci ratio: 5.843560e-01	ci left: 7.417751e-06	ci right 1.370484e-05	k: 44	n:4310000
TROAP   4310000 perm   7842 sec   (550 perm/sec)   p_kst 1.020882e-05   p_cons 9.979376e-01   p_joint 1.132251e-04

Joint ci ratio: 1.768970e-01	ci left: 1.036045e-04	ci right 1.239274e-04	k: 490	n:4320000
Cons ci ratio: 8.574596e-05	ci left: 9.978943e-01	ci right 9.979801e-01	k: 4311090	n:4320000
KS ci ratio: 5.843560e-01	ci left: 7.400581e-06	ci right 1.367311e-05	k: 44	n:4320000
TROAP   4320000 perm   7876 sec   (549 perm/sec)   p_kst 1.018519e-05   p_cons 9.979375e-01   p_joint 1.134259e-04

Joint ci ratio: 1.765378e-01	ci left: 1.038067e-04	ci right 1.241235e-04	k: 492	n:4330000
Cons ci ratio: 8.565829e-05	ci left: 9.978938e-01	ci right 9.979795e-01	k: 4321067	n:4330000
KS ci ratio: 5.779693e-01	ci left: 7.580451e-06	ci right 1.390611e-05	k: 45	n:4330000
TROAP   4330000 perm   7910 sec   (547 perm/sec)   p_kst 1.039261e-05   p_cons 9.979370e-01   p_joint 1.136259e-04

Joint ci ratio: 1.765379e-01	ci left: 1.035675e-04	ci right 1.238375e-04	k: 492	n:4340000
Cons ci ratio: 8.556130e-05	ci left: 9.978937e-01	ci right 9.979793e-01	k: 4331046	n:4340000
KS ci ratio: 5.779693e-01	ci left: 7.562984e-06	ci right 1.387406e-05	k: 45	n:4340000
TROAP   4340000 perm   7944 sec   (546 perm/sec)   p_kst 1.036866e-05   p_cons 9.979369e-01   p_joint 1.133641e-04

Joint ci ratio: 1.778049e-01	ci left: 1.017915e-04	ci right 1.218723e-04	k: 485	n:4350000
Cons ci ratio: 8.548373e-05	ci left: 9.978928e-01	ci right 9.979783e-01	k: 4341021	n:4350000
KS ci ratio: 5.779693e-01	ci left: 7.545598e-06	ci right 1.384217e-05	k: 45	n:4350000
TROAP   4350000 perm   7978 sec   (545 perm/sec)   p_kst 1.034483e-05   p_cons 9.979359e-01   p_joint 1.114943e-04

Joint ci ratio: 1.778049e-01	ci left: 1.015581e-04	ci right 1.215928e-04	k: 485	n:4360000
Cons ci ratio: 8.534455e-05	ci left: 9.978948e-01	ci right 9.979802e-01	k: 4351009	n:4360000
KS ci ratio: 5.779694e-01	ci left: 7.528291e-06	ci right 1.381042e-05	k: 45	n:4360000
TROAP   4360000 perm   8012 sec   (544 perm/sec)   p_kst 1.032110e-05   p_cons 9.979378e-01   p_joint 1.112385e-04

Joint ci ratio: 1.776222e-01	ci left: 1.015443e-04	ci right 1.215536e-04	k: 486	n:4370000
Cons ci ratio: 8.524389e-05	ci left: 9.978950e-01	ci right 9.979803e-01	k: 4360989	n:4370000
KS ci ratio: 5.779694e-01	ci left: 7.511064e-06	ci right 1.377882e-05	k: 45	n:4370000
TROAP   4370000 perm   8047 sec   (543 perm/sec)   p_kst 1.029748e-05   p_cons 9.979380e-01   p_joint 1.112128e-04

Joint ci ratio: 1.772586e-01	ci left: 1.017488e-04	ci right 1.217529e-04	k: 488	n:4380000
Cons ci ratio: 8.514830e-05	ci left: 9.978950e-01	ci right 9.979802e-01	k: 4370968	n:4380000
KS ci ratio: 5.779694e-01	ci left: 7.493916e-06	ci right 1.374736e-05	k: 45	n:4380000
TROAP   4380000 perm   8081 sec   (542 perm/sec)   p_kst 1.027397e-05   p_cons 9.979379e-01   p_joint 1.114155e-04

Joint ci ratio: 1.772586e-01	ci left: 1.015171e-04	ci right 1.214756e-04	k: 488	n:4390000
Cons ci ratio: 8.506246e-05	ci left: 9.978945e-01	ci right 9.979796e-01	k: 4380945	n:4390000
KS ci ratio: 5.779694e-01	ci left: 7.476845e-06	ci right 1.371604e-05	k: 45	n:4390000
TROAP   4390000 perm   8115 sec   (541 perm/sec)   p_kst 1.025057e-05   p_cons 9.979374e-01   p_joint 1.111617e-04

Joint ci ratio: 1.772587e-01	ci left: 1.012863e-04	ci right 1.211995e-04	k: 488	n:4400000
Cons ci ratio: 8.499093e-05	ci left: 9.978933e-01	ci right 9.979783e-01	k: 4390919	n:4400000
KS ci ratio: 5.779694e-01	ci left: 7.459852e-06	ci right 1.368487e-05	k: 45	n:4400000
TROAP   4400000 perm   8150 sec   (540 perm/sec)   p_kst 1.022727e-05   p_cons 9.979361e-01   p_joint 1.109091e-04

Joint ci ratio: 1.772587e-01	ci left: 1.010567e-04	ci right 1.209247e-04	k: 488	n:4410000
Cons ci ratio: 8.492422e-05	ci left: 9.978919e-01	ci right 9.979769e-01	k: 4400892	n:4410000
KS ci ratio: 5.779694e-01	ci left: 7.442937e-06	ci right 1.365384e-05	k: 45	n:4410000
TROAP   4410000 perm   8185 sec   (539 perm/sec)   p_kst 1.020408e-05   p_cons 9.979347e-01   p_joint 1.106576e-04

Joint ci ratio: 1.368796e-01	ci left: 1.728206e-04	ci right 1.984299e-04	k: 819	n:4420000
Cons ci ratio: 8.482039e-05	ci left: 9.978923e-01	ci right 9.979772e-01	k: 4410873	n:4420000
KS ci ratio: 4.825150e-01	ci left: 1.134971e-05	ci right 1.874382e-05	k: 65	n:4420000
TROAP   4420000 perm   8220 sec   (538 perm/sec)   p_kst 1.470588e-05   p_cons 9.979351e-01   p_joint 1.852941e-04

Joint ci ratio: 1.381493e-01	ci left: 1.691610e-04	ci right 1.944796e-04	k: 804	n:4430000
Cons ci ratio: 8.474014e-05	ci left: 9.978916e-01	ci right 9.979764e-01	k: 4420849	n:4430000
KS ci ratio: 4.825150e-01	ci left: 1.132409e-05	ci right 1.870151e-05	k: 65	n:4430000
TROAP   4430000 perm   8255 sec   (537 perm/sec)   p_kst 1.467269e-05   p_cons 9.979343e-01   p_joint 1.814898e-04

Joint ci ratio: 1.378926e-01	ci left: 1.694323e-04	ci right 1.947406e-04	k: 807	n:4440000
Cons ci ratio: 8.463236e-05	ci left: 9.978922e-01	ci right 9.979769e-01	k: 4430831	n:4440000
KS ci ratio: 4.789006e-01	ci left: 1.149650e-05	ci right 1.891171e-05	k: 66	n:4440000
TROAP   4440000 perm   8290 sec   (536 perm/sec)   p_kst 1.486486e-05   p_cons 9.979349e-01   p_joint 1.817568e-04

Joint ci ratio: 1.378073e-01	ci left: 1.692685e-04	ci right 1.945354e-04	k: 808	n:4450000
Cons ci ratio: 8.453881e-05	ci left: 9.978922e-01	ci right 9.979768e-01	k: 4440810	n:4450000
KS ci ratio: 4.789006e-01	ci left: 1.147067e-05	ci right 1.886922e-05	k: 66	n:4450000
TROAP   4450000 perm   8325 sec   (535 perm/sec)   p_kst 1.483146e-05   p_cons 9.979348e-01   p_joint 1.815730e-04

Joint ci ratio: 1.375525e-01	ci left: 1.695385e-04	ci right 1.947950e-04	k: 811	n:4460000
Cons ci ratio: 8.443180e-05	ci left: 9.978929e-01	ci right 9.979773e-01	k: 4450792	n:4460000
KS ci ratio: 4.789006e-01	ci left: 1.144495e-05	ci right 1.882691e-05	k: 66	n:4460000
TROAP   4460000 perm   8361 sec   (533 perm/sec)   p_kst 1.479821e-05   p_cons 9.979354e-01   p_joint 1.818386e-04

Joint ci ratio: 1.375525e-01	ci left: 1.691592e-04	ci right 1.943592e-04	k: 811	n:4470000
Cons ci ratio: 8.433891e-05	ci left: 9.978928e-01	ci right 9.979772e-01	k: 4460771	n:4470000
KS ci ratio: 4.789006e-01	ci left: 1.141935e-05	ci right 1.878479e-05	k: 66	n:4470000
TROAP   4470000 perm   8396 sec   (532 perm/sec)   p_kst 1.476510e-05   p_cons 9.979353e-01   p_joint 1.814318e-04

Joint ci ratio: 1.374679e-01	ci left: 1.689972e-04	ci right 1.941563e-04	k: 812	n:4480000
Cons ci ratio: 8.425090e-05	ci left: 9.978926e-01	ci right 9.979769e-01	k: 4470749	n:4480000
KS ci ratio: 4.789006e-01	ci left: 1.139386e-05	ci right 1.874286e-05	k: 66	n:4480000
TROAP   4480000 perm   8431 sec   (531 perm/sec)   p_kst 1.473214e-05   p_cons 9.979350e-01   p_joint 1.812500e-04

Joint ci ratio: 1.372991e-01	ci left: 1.690509e-04	ci right 1.941846e-04	k: 814	n:4490000
Cons ci ratio: 8.417225e-05	ci left: 9.978919e-01	ci right 9.979761e-01	k: 4480725	n:4490000
KS ci ratio: 4.789006e-01	ci left: 1.136848e-05	ci right 1.870112e-05	k: 66	n:4490000
TROAP   4490000 perm   8466 sec   (530 perm/sec)   p_kst 1.469933e-05   p_cons 9.979343e-01   p_joint 1.812918e-04

Joint ci ratio: 1.372150e-01	ci left: 1.688898e-04	ci right 1.939829e-04	k: 815	n:4500000
Cons ci ratio: 8.405756e-05	ci left: 9.978930e-01	ci right 9.979771e-01	k: 4490709	n:4500000
KS ci ratio: 4.789006e-01	ci left: 1.134322e-05	ci right 1.865956e-05	k: 66	n:4500000
TROAP   4500000 perm   8502 sec   (529 perm/sec)   p_kst 1.466667e-05   p_cons 9.979353e-01   p_joint 1.811111e-04

Joint ci ratio: 1.371310e-01	ci left: 1.687295e-04	ci right 1.937822e-04	k: 816	n:4510000
Cons ci ratio: 8.394783e-05	ci left: 9.978938e-01	ci right 9.979778e-01	k: 4500692	n:4510000
KS ci ratio: 4.789006e-01	ci left: 1.131807e-05	ci right 1.861819e-05	k: 66	n:4510000
TROAP   4510000 perm   8537 sec   (528 perm/sec)   p_kst 1.463415e-05   p_cons 9.979361e-01   p_joint 1.809313e-04

Joint ci ratio: 1.369635e-01	ci left: 1.687835e-04	ci right 1.938111e-04	k: 818	n:4520000
Cons ci ratio: 8.382500e-05	ci left: 9.978954e-01	ci right 9.979792e-01	k: 4510678	n:4520000
KS ci ratio: 4.789006e-01	ci left: 1.129303e-05	ci right 1.857699e-05	k: 66	n:4520000
TROAP   4520000 perm   8573 sec   (527 perm/sec)   p_kst 1.460177e-05   p_cons 9.979376e-01   p_joint 1.809735e-04

Joint ci ratio: 1.367965e-01	ci left: 1.688373e-04	ci right 1.938398e-04	k: 820	n:4530000
Cons ci ratio: 8.370268e-05	ci left: 9.978969e-01	ci right 9.979806e-01	k: 4520664	n:4530000
KS ci ratio: 4.789006e-01	ci left: 1.126810e-05	ci right 1.853599e-05	k: 66	n:4530000
TROAP   4530000 perm   8608 sec   (526 perm/sec)   p_kst 1.456954e-05   p_cons 9.979391e-01   p_joint 1.810155e-04

Joint ci ratio: 1.365473e-01	ci left: 1.691036e-04	ci right 1.940963e-04	k: 823	n:4540000
Cons ci ratio: 8.362113e-05	ci left: 9.978964e-01	ci right 9.979801e-01	k: 4530641	n:4540000
KS ci ratio: 4.789006e-01	ci left: 1.124328e-05	ci right 1.849516e-05	k: 66	n:4540000
TROAP   4540000 perm   8643 sec   (525 perm/sec)   p_kst 1.453744e-05   p_cons 9.979385e-01   p_joint 1.812775e-04

Joint ci ratio: 1.362170e-01	ci left: 1.695811e-04	ci right 1.945788e-04	k: 827	n:4550000
Cons ci ratio: 8.352644e-05	ci left: 9.978966e-01	ci right 9.979801e-01	k: 4540621	n:4550000
KS ci ratio: 4.789006e-01	ci left: 1.121857e-05	ci right 1.845451e-05	k: 66	n:4550000
TROAP   4550000 perm   8678 sec   (524 perm/sec)   p_kst 1.450549e-05   p_cons 9.979387e-01   p_joint 1.817582e-04

Joint ci ratio: 1.371311e-01	ci left: 1.668793e-04	ci right 1.916574e-04	k: 816	n:4560000
Cons ci ratio: 8.347208e-05	ci left: 9.978948e-01	ci right 9.979783e-01	k: 4550592	n:4560000
KS ci ratio: 4.789007e-01	ci left: 1.119396e-05	ci right 1.841404e-05	k: 66	n:4560000
TROAP   4560000 perm   8714 sec   (523 perm/sec)   p_kst 1.447368e-05   p_cons 9.979368e-01   p_joint 1.789474e-04

Joint ci ratio: 1.370473e-01	ci left: 1.667255e-04	ci right 1.914643e-04	k: 817	n:4570000
Cons ci ratio: 8.337790e-05	ci left: 9.978950e-01	ci right 9.979784e-01	k: 4560572	n:4570000
KS ci ratio: 4.789007e-01	ci left: 1.116947e-05	ci right 1.837375e-05	k: 66	n:4570000
TROAP   4570000 perm   8750 sec   (522 perm/sec)   p_kst 1.444201e-05   p_cons 9.979370e-01   p_joint 1.787746e-04

Joint ci ratio: 1.370473e-01	ci left: 1.663615e-04	ci right 1.910463e-04	k: 817	n:4580000
Cons ci ratio: 8.332377e-05	ci left: 9.978932e-01	ci right 9.979765e-01	k: 4570543	n:4580000
KS ci ratio: 4.789007e-01	ci left: 1.114508e-05	ci right 1.833363e-05	k: 66	n:4580000
TROAP   4580000 perm   8786 sec   (521 perm/sec)   p_kst 1.441048e-05   p_cons 9.979352e-01   p_joint 1.783843e-04

Joint ci ratio: 1.373837e-01	ci left: 1.651575e-04	ci right 1.897287e-04	k: 813	n:4590000
Cons ci ratio: 8.326528e-05	ci left: 9.978916e-01	ci right 9.979749e-01	k: 4580515	n:4590000
KS ci ratio: 4.789007e-01	ci left: 1.112080e-05	ci right 1.829369e-05	k: 66	n:4590000
TROAP   4590000 perm   8822 sec   (520 perm/sec)   p_kst 1.437908e-05   p_cons 9.979336e-01   p_joint 1.771242e-04

Joint ci ratio: 1.372994e-01	ci left: 1.650084e-04	ci right 1.895411e-04	k: 814	n:4600000
Cons ci ratio: 8.320686e-05	ci left: 9.978900e-01	ci right 9.979733e-01	k: 4590487	n:4600000
KS ci ratio: 4.789007e-01	ci left: 1.109662e-05	ci right 1.825392e-05	k: 66	n:4600000
TROAP   4600000 perm   8859 sec   (519 perm/sec)   p_kst 1.434783e-05   p_cons 9.979320e-01   p_joint 1.769565e-04

Joint ci ratio: 1.371313e-01	ci left: 1.650694e-04	ci right 1.895787e-04	k: 816	n:4610000
Cons ci ratio: 8.310048e-05	ci left: 9.978909e-01	ci right 9.979740e-01	k: 4600470	n:4610000
KS ci ratio: 4.789007e-01	ci left: 1.107255e-05	ci right 1.821432e-05	k: 66	n:4610000
TROAP   4610000 perm   8896 sec   (518 perm/sec)   p_kst 1.431670e-05   p_cons 9.979328e-01   p_joint 1.770065e-04

Joint ci ratio: 1.370474e-01	ci left: 1.649211e-04	ci right 1.893922e-04	k: 817	n:4620000
Cons ci ratio: 8.297707e-05	ci left: 9.978926e-01	ci right 9.979756e-01	k: 4610457	n:4620000
KS ci ratio: 4.789007e-01	ci left: 1.104859e-05	ci right 1.817490e-05	k: 66	n:4620000
TROAP   4620000 perm   8932 sec   (517 perm/sec)   p_kst 1.428571e-05   p_cons 9.979344e-01   p_joint 1.768398e-04

Joint ci ratio: 1.367968e-01	ci left: 1.651907e-04	ci right 1.896533e-04	k: 820	n:4630000
Cons ci ratio: 8.289324e-05	ci left: 9.978923e-01	ci right 9.979753e-01	k: 4620435	n:4630000
KS ci ratio: 4.753663e-01	ci left: 1.121472e-05	ci right 1.837742e-05	k: 67	n:4630000
TROAP   4630000 perm   8970 sec   (516 perm/sec)   p_kst 1.447084e-05   p_cons 9.979341e-01   p_joint 1.771058e-04

Joint ci ratio: 1.367136e-01	ci left: 1.650428e-04	ci right 1.894674e-04	k: 821	n:4640000
Cons ci ratio: 8.277937e-05	ci left: 9.978936e-01	ci right 9.979764e-01	k: 4630420	n:4640000
KS ci ratio: 4.753663e-01	ci left: 1.119055e-05	ci right 1.833782e-05	k: 67	n:4640000
TROAP   4640000 perm   9006 sec   (515 perm/sec)   p_kst 1.443966e-05   p_cons 9.979353e-01   p_joint 1.769397e-04

Joint ci ratio: 1.367136e-01	ci left: 1.646878e-04	ci right 1.890600e-04	k: 821	n:4650000
Cons ci ratio: 8.268320e-05	ci left: 9.978940e-01	ci right 9.979767e-01	k: 4640401	n:4650000
KS ci ratio: 4.753663e-01	ci left: 1.116649e-05	ci right 1.829838e-05	k: 67	n:4650000
TROAP   4650000 perm   9044 sec   (514 perm/sec)   p_kst 1.440860e-05   p_cons 9.979357e-01   p_joint 1.765591e-04

Joint ci ratio: 1.367136e-01	ci left: 1.643344e-04	ci right 1.886543e-04	k: 821	n:4660000
Cons ci ratio: 8.257445e-05	ci left: 9.978951e-01	ci right 9.979777e-01	k: 4650385	n:4660000
KS ci ratio: 4.753663e-01	ci left: 1.114252e-05	ci right 1.825911e-05	k: 67	n:4660000
TROAP   4660000 perm   9080 sec   (513 perm/sec)   p_kst 1.437768e-05   p_cons 9.979367e-01   p_joint 1.761803e-04

Joint ci ratio: 1.365476e-01	ci left: 1.643962e-04	ci right 1.886932e-04	k: 823	n:4670000
Cons ci ratio: 8.252615e-05	ci left: 9.978931e-01	ci right 9.979757e-01	k: 4660355	n:4670000
KS ci ratio: 4.753663e-01	ci left: 1.111866e-05	ci right 1.822001e-05	k: 67	n:4670000
TROAP   4670000 perm   9117 sec   (512 perm/sec)   p_kst 1.434690e-05   p_cons 9.979347e-01   p_joint 1.762313e-04

Joint ci ratio: 1.365476e-01	ci left: 1.640449e-04	ci right 1.882900e-04	k: 823	n:4680000
Cons ci ratio: 8.243086e-05	ci left: 9.978935e-01	ci right 9.979760e-01	k: 4670336	n:4680000
KS ci ratio: 4.753663e-01	ci left: 1.109491e-05	ci right 1.818108e-05	k: 67	n:4680000
TROAP   4680000 perm   9153 sec   (511 perm/sec)   p_kst 1.431624e-05   p_cons 9.979350e-01   p_joint 1.758547e-04

Joint ci ratio: 1.364649e-01	ci left: 1.639011e-04	ci right 1.881090e-04	k: 824	n:4690000
Cons ci ratio: 8.230607e-05	ci left: 9.978954e-01	ci right 9.979778e-01	k: 4680324	n:4690000
KS ci ratio: 4.753663e-01	ci left: 1.107125e-05	ci right 1.814232e-05	k: 67	n:4690000
TROAP   4690000 perm   9190 sec   (510 perm/sec)   p_kst 1.428571e-05   p_cons 9.979369e-01   p_joint 1.756930e-04

Joint ci ratio: 1.363822e-01	ci left: 1.637578e-04	ci right 1.879288e-04	k: 825	n:4700000
Cons ci ratio: 8.220728e-05	ci left: 9.978960e-01	ci right 9.979783e-01	k: 4690306	n:4700000
KS ci ratio: 4.753663e-01	ci left: 1.104769e-05	ci right 1.810372e-05	k: 67	n:4700000
TROAP   4700000 perm   9227 sec   (509 perm/sec)   p_kst 1.425532e-05   p_cons 9.979374e-01   p_joint 1.755319e-04

Joint ci ratio: 1.362174e-01	ci left: 1.638203e-04	ci right 1.879689e-04	k: 827	n:4710000
Cons ci ratio: 8.210036e-05	ci left: 9.978971e-01	ci right 9.979792e-01	k: 4700290	n:4710000
KS ci ratio: 4.753663e-01	ci left: 1.102424e-05	ci right 1.806528e-05	k: 67	n:4710000
TROAP   4710000 perm   9265 sec   (508 perm/sec)   p_kst 1.422505e-05   p_cons 9.979384e-01   p_joint 1.755839e-04

Joint ci ratio: 1.360532e-01	ci left: 1.638825e-04	ci right 1.880088e-04	k: 829	n:4720000
Cons ci ratio: 8.200652e-05	ci left: 9.978974e-01	ci right 9.979795e-01	k: 4710271	n:4720000
KS ci ratio: 4.753664e-01	ci left: 1.100088e-05	ci right 1.802701e-05	k: 67	n:4720000
TROAP   4720000 perm   9304 sec   (507 perm/sec)   p_kst 1.419492e-05   p_cons 9.979388e-01   p_joint 1.756356e-04

Joint ci ratio: 1.358080e-01	ci left: 1.641487e-04	ci right 1.882671e-04	k: 832	n:4730000
Cons ci ratio: 8.193824e-05	ci left: 9.978965e-01	ci right 9.979785e-01	k: 4720246	n:4730000
KS ci ratio: 4.753664e-01	ci left: 1.097762e-05	ci right 1.798889e-05	k: 67	n:4730000
TROAP   4730000 perm   9341 sec   (506 perm/sec)   p_kst 1.416490e-05   p_cons 9.979378e-01   p_joint 1.758985e-04

Joint ci ratio: 1.357265e-01	ci left: 1.640062e-04	ci right 1.880881e-04	k: 833	n:4740000
Cons ci ratio: 8.187012e-05	ci left: 9.978957e-01	ci right 9.979776e-01	k: 4730221	n:4740000
KS ci ratio: 4.753664e-01	ci left: 1.095446e-05	ci right 1.795094e-05	k: 67	n:4740000
TROAP   4740000 perm   9378 sec   (505 perm/sec)   p_kst 1.413502e-05   p_cons 9.979369e-01   p_joint 1.757384e-04

Joint ci ratio: 1.357266e-01	ci left: 1.636610e-04	ci right 1.876921e-04	k: 833	n:4750000
Cons ci ratio: 8.178125e-05	ci left: 9.978958e-01	ci right 9.979777e-01	k: 4740201	n:4750000
KS ci ratio: 4.753664e-01	ci left: 1.093140e-05	ci right 1.791315e-05	k: 67	n:4750000
TROAP   4750000 perm   9414 sec   (505 perm/sec)   p_kst 1.410526e-05   p_cons 9.979371e-01   p_joint 1.753684e-04

Joint ci ratio: 1.366308e-01	ci left: 1.610849e-04	ci right 1.849082e-04	k: 822	n:4760000
Cons ci ratio: 8.167599e-05	ci left: 9.978969e-01	ci right 9.979786e-01	k: 4750185	n:4760000
KS ci ratio: 4.719091e-01	ci left: 1.109343e-05	ci right 1.811051e-05	k: 68	n:4760000
TROAP   4760000 perm   9451 sec   (504 perm/sec)   p_kst 1.428571e-05   p_cons 9.979380e-01   p_joint 1.726891e-04

Joint ci ratio: 1.365479e-01	ci left: 1.609497e-04	ci right 1.847374e-04	k: 823	n:4770000
Cons ci ratio: 8.157528e-05	ci left: 9.978977e-01	ci right 9.979793e-01	k: 4760168	n:4770000
KS ci ratio: 4.719091e-01	ci left: 1.107018e-05	ci right 1.807254e-05	k: 68	n:4770000
TROAP   4770000 perm   9489 sec   (503 perm/sec)   p_kst 1.425577e-05   p_cons 9.979388e-01   p_joint 1.725367e-04

Joint ci ratio: 1.364651e-01	ci left: 1.608150e-04	ci right 1.845672e-04	k: 824	n:4780000
Cons ci ratio: 8.151222e-05	ci left: 9.978966e-01	ci right 9.979781e-01	k: 4770142	n:4780000
KS ci ratio: 4.719091e-01	ci left: 1.104702e-05	ci right 1.803474e-05	k: 68	n:4780000
TROAP   4780000 perm   9527 sec   (502 perm/sec)   p_kst 1.422594e-05   p_cons 9.979377e-01   p_joint 1.723849e-04

Joint ci ratio: 1.362176e-01	ci left: 1.610842e-04	ci right 1.848296e-04	k: 827	n:4790000
Cons ci ratio: 8.143276e-05	ci left: 9.978963e-01	ci right 9.979778e-01	k: 4780120	n:4790000
KS ci ratio: 4.719091e-01	ci left: 1.102395e-05	ci right 1.799709e-05	k: 68	n:4790000
TROAP   4790000 perm   9566 sec   (501 perm/sec)   p_kst 1.419624e-05   p_cons 9.979374e-01   p_joint 1.726514e-04

Joint ci ratio: 1.367140e-01	ci left: 1.595413e-04	ci right 1.831519e-04	k: 821	n:4800000
Cons ci ratio: 8.132061e-05	ci left: 9.978978e-01	ci right 9.979791e-01	k: 4790106	n:4800000
KS ci ratio: 4.719091e-01	ci left: 1.100099e-05	ci right 1.795959e-05	k: 68	n:4800000
TROAP   4800000 perm   9605 sec   (500 perm/sec)   p_kst 1.416667e-05   p_cons 9.979387e-01   p_joint 1.710417e-04

Joint ci ratio: 1.364652e-01	ci left: 1.598120e-04	ci right 1.834161e-04	k: 824	n:4810000
Cons ci ratio: 8.122940e-05	ci left: 9.978982e-01	ci right 9.979794e-01	k: 4800087	n:4810000
KS ci ratio: 4.685262e-01	ci left: 1.116137e-05	ci right 1.815463e-05	k: 69	n:4810000
TROAP   4810000 perm   9643 sec   (499 perm/sec)   p_kst 1.434511e-05   p_cons 9.979391e-01   p_joint 1.713098e-04

Joint ci ratio: 1.363825e-01	ci left: 1.596809e-04	ci right 1.832501e-04	k: 825	n:4820000
Cons ci ratio: 8.112213e-05	ci left: 9.978994e-01	ci right 9.979805e-01	k: 4810072	n:4820000
KS ci ratio: 4.685262e-01	ci left: 1.113822e-05	ci right 1.811696e-05	k: 69	n:4820000
TROAP   4820000 perm   9681 sec   (498 perm/sec)   p_kst 1.431535e-05   p_cons 9.979402e-01   p_joint 1.711618e-04

Joint ci ratio: 1.362177e-01	ci left: 1.597502e-04	ci right 1.832989e-04	k: 827	n:4830000
Cons ci ratio: 8.101525e-05	ci left: 9.979006e-01	ci right 9.979816e-01	k: 4820057	n:4830000
KS ci ratio: 4.685262e-01	ci left: 1.111515e-05	ci right 1.807945e-05	k: 69	n:4830000
TROAP   4830000 perm   9719 sec   (497 perm/sec)   p_kst 1.428571e-05   p_cons 9.979414e-01   p_joint 1.712215e-04

Joint ci ratio: 1.362177e-01	ci left: 1.594201e-04	ci right 1.829202e-04	k: 827	n:4840000
Cons ci ratio: 8.093726e-05	ci left: 9.979003e-01	ci right 9.979813e-01	k: 4830035	n:4840000
KS ci ratio: 4.685262e-01	ci left: 1.109219e-05	ci right 1.804210e-05	k: 69	n:4840000
TROAP   4840000 perm   9758 sec   (496 perm/sec)   p_kst 1.425620e-05   p_cons 9.979411e-01   p_joint 1.708678e-04

Joint ci ratio: 1.359716e-01	ci left: 1.596889e-04	ci right 1.831826e-04	k: 830	n:4850000
Cons ci ratio: 8.085949e-05	ci left: 9.979001e-01	ci right 9.979810e-01	k: 4840013	n:4850000
KS ci ratio: 4.685262e-01	ci left: 1.106932e-05	ci right 1.800490e-05	k: 69	n:4850000
TROAP   4850000 perm   9797 sec   (495 perm/sec)   p_kst 1.422680e-05   p_cons 9.979408e-01   p_joint 1.711340e-04

Joint ci ratio: 1.358083e-01	ci left: 1.597579e-04	ci right 1.832312e-04	k: 832	n:4860000
Cons ci ratio: 8.077386e-05	ci left: 9.979002e-01	ci right 9.979811e-01	k: 4849993	n:4860000
KS ci ratio: 4.685262e-01	ci left: 1.104654e-05	ci right 1.796785e-05	k: 69	n:4860000
TROAP   4860000 perm   9835 sec   (494 perm/sec)   p_kst 1.419753e-05   p_cons 9.979409e-01   p_joint 1.711934e-04

Joint ci ratio: 1.364653e-01	ci left: 1.578431e-04	ci right 1.811564e-04	k: 824	n:4870000
Cons ci ratio: 8.070865e-05	ci left: 9.978994e-01	ci right 9.979801e-01	k: 4859968	n:4870000
KS ci ratio: 4.685262e-01	ci left: 1.102386e-05	ci right 1.793096e-05	k: 69	n:4870000
TROAP   4870000 perm   9874 sec   (493 perm/sec)   p_kst 1.416838e-05   p_cons 9.979400e-01   p_joint 1.691992e-04

Joint ci ratio: 1.393678e-01	ci left: 1.507927e-04	ci right 1.735778e-04	k: 790	n:4880000
Cons ci ratio: 8.061145e-05	ci left: 9.979002e-01	ci right 9.979808e-01	k: 4869951	n:4880000
KS ci ratio: 4.685262e-01	ci left: 1.100127e-05	ci right 1.789421e-05	k: 69	n:4880000
TROAP   4880000 perm   9913 sec   (492 perm/sec)   p_kst 1.413934e-05   p_cons 9.979408e-01   p_joint 1.618852e-04

Joint ci ratio: 1.392798e-01	ci left: 1.506817e-04	ci right 1.734344e-04	k: 791	n:4890000
Cons ci ratio: 8.053060e-05	ci left: 9.979001e-01	ci right 9.979807e-01	k: 4879930	n:4890000
KS ci ratio: 4.685262e-01	ci left: 1.097877e-05	ci right 1.785762e-05	k: 69	n:4890000
TROAP   4890000 perm   9951 sec   (491 perm/sec)   p_kst 1.411043e-05   p_cons 9.979407e-01   p_joint 1.617587e-04

Joint ci ratio: 1.391043e-01	ci left: 1.507682e-04	ci right 1.735028e-04	k: 793	n:4900000
Cons ci ratio: 8.048195e-05	ci left: 9.978984e-01	ci right 9.979789e-01	k: 4889901	n:4900000
KS ci ratio: 4.685262e-01	ci left: 1.095637e-05	ci right 1.782117e-05	k: 69	n:4900000
TROAP   4900000 perm   9990 sec   (491 perm/sec)   p_kst 1.408163e-05   p_cons 9.979390e-01   p_joint 1.618367e-04

Joint ci ratio: 1.389294e-01	ci left: 1.508543e-04	ci right 1.735710e-04	k: 795	n:4910000
Cons ci ratio: 8.039752e-05	ci left: 9.978986e-01	ci right 9.979790e-01	k: 4899881	n:4910000
KS ci ratio: 4.652150e-01	ci left: 1.111375e-05	ci right 1.801235e-05	k: 70	n:4910000
TROAP   4910000 perm   10028 sec   (490 perm/sec)   p_kst 1.425662e-05   p_cons 9.979391e-01   p_joint 1.619145e-04

Joint ci ratio: 1.388423e-01	ci left: 1.507439e-04	ci right 1.734285e-04	k: 796	n:4920000
Cons ci ratio: 8.028953e-05	ci left: 9.979000e-01	ci right 9.979803e-01	k: 4909867	n:4920000
KS ci ratio: 4.652150e-01	ci left: 1.109116e-05	ci right 1.797574e-05	k: 70	n:4920000
TROAP   4920000 perm   10067 sec   (489 perm/sec)   p_kst 1.422764e-05   p_cons 9.979404e-01   p_joint 1.617886e-04

Joint ci ratio: 1.384951e-01	ci left: 1.512213e-04	ci right 1.739162e-04	k: 800	n:4930000
Cons ci ratio: 8.018591e-05	ci left: 9.979012e-01	ci right 9.979814e-01	k: 4919852	n:4930000
KS ci ratio: 4.652150e-01	ci left: 1.106866e-05	ci right 1.793927e-05	k: 70	n:4930000
TROAP   4930000 perm   10106 sec   (488 perm/sec)   p_kst 1.419878e-05   p_cons 9.979416e-01   p_joint 1.622718e-04

Joint ci ratio: 1.382365e-01	ci left: 1.515015e-04	ci right 1.741924e-04	k: 803	n:4940000
Cons ci ratio: 8.012607e-05	ci left: 9.979001e-01	ci right 9.979803e-01	k: 4929826	n:4940000
KS ci ratio: 4.652150e-01	ci left: 1.104626e-05	ci right 1.790296e-05	k: 70	n:4940000
TROAP   4940000 perm   10146 sec   (487 perm/sec)   p_kst 1.417004e-05   p_cons 9.979405e-01   p_joint 1.625506e-04

Joint ci ratio: 1.379793e-01	ci left: 1.517805e-04	ci right 1.744675e-04	k: 806	n:4950000
Cons ci ratio: 8.004668e-05	ci left: 9.979001e-01	ci right 9.979802e-01	k: 4939805	n:4950000
KS ci ratio: 4.652150e-01	ci left: 1.102394e-05	ci right 1.786679e-05	k: 70	n:4950000
TROAP   4950000 perm   10186 sec   (486 perm/sec)   p_kst 1.414141e-05   p_cons 9.979404e-01   p_joint 1.628283e-04

Joint ci ratio: 1.378086e-01	ci left: 1.518638e-04	ci right 1.745329e-04	k: 808	n:4960000
Cons ci ratio: 7.995575e-05	ci left: 9.979006e-01	ci right 9.979806e-01	k: 4949787	n:4960000
KS ci ratio: 4.652150e-01	ci left: 1.100172e-05	ci right 1.783077e-05	k: 70	n:4960000
TROAP   4960000 perm   10225 sec   (485 perm/sec)   p_kst 1.411290e-05   p_cons 9.979409e-01   p_joint 1.629032e-04

Joint ci ratio: 1.374691e-01	ci left: 1.523354e-04	ci right 1.750142e-04	k: 812	n:4970000
Cons ci ratio: 7.988860e-05	ci left: 9.979000e-01	ci right 9.979799e-01	k: 4959763	n:4970000
KS ci ratio: 4.619730e-01	ci left: 1.115728e-05	ci right 1.801945e-05	k: 71	n:4970000
TROAP   4970000 perm   10266 sec   (484 perm/sec)   p_kst 1.428571e-05   p_cons 9.979402e-01   p_joint 1.633803e-04

Joint ci ratio: 1.373004e-01	ci left: 1.524173e-04	ci right 1.750782e-04	k: 814	n:4980000
Cons ci ratio: 7.980601e-05	ci left: 9.979002e-01	ci right 9.979800e-01	k: 4969743	n:4980000
KS ci ratio: 4.587979e-01	ci left: 1.131238e-05	ci right 1.820721e-05	k: 72	n:4980000
TROAP   4980000 perm   10307 sec   (483 perm/sec)   p_kst 1.445783e-05   p_cons 9.979404e-01   p_joint 1.634538e-04

Joint ci ratio: 1.369646e-01	ci left: 1.528859e-04	ci right 1.755564e-04	k: 818	n:4990000
Cons ci ratio: 7.971591e-05	ci left: 9.979007e-01	ci right 9.979805e-01	k: 4979725	n:4990000
KS ci ratio: 4.556873e-01	ci left: 1.146702e-05	ci right 1.839406e-05	k: 73	n:4990000
TROAP   4990000 perm   10347 sec   (482 perm/sec)   p_kst 1.462926e-05   p_cons 9.979409e-01   p_joint 1.639279e-04

Joint ci ratio: 1.368811e-01	ci left: 1.527733e-04	ci right 1.754122e-04	k: 819	n:5000000
Cons ci ratio: 7.962998e-05	ci left: 9.979011e-01	ci right 9.979807e-01	k: 4989706	n:5000000
KS ci ratio: 4.556873e-01	ci left: 1.144409e-05	ci right 1.835727e-05	k: 73	n:5000000
TROAP   5000000 perm   10387 sec   (481 perm/sec)   p_kst 1.460000e-05   p_cons 9.979412e-01   p_joint 1.638000e-04

Outputting figure to mutsig2_images.part000000000182/TROAP.5_2495_5000000_1.46e-05_0.99794_0.0001638.png
                gene_name: TROAP
               theta_stop: 0.46 
                    nperm: 5000000 
                     p_ks: 1.46e-05 
        ci_ks_bounds_left: 1.14e-05 
       ci_ks_bounds_right: 1.84e-05 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.00016 
     ci_joint_bounds_left: 0.00015 
    ci_joint_bounds_right: 0.00018 

Current progress: 14 percent done.
TRPM4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 7.926439e-03	ci left: 9.568097e-01	ci right 9.645190e-01	k: 9608	n:10000
KS ci ratio: 1.779874e-02	ci left: 8.215767e-01	ci right 8.364311e-01	k: 8291	n:10000
TRPM4   10000 perm   2 sec   (5136 perm/sec)   p_kst 8.291000e-01   p_cons 9.608000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000182/TRPM4.4_3745_10000_0.8291_0.9608_1.png
                gene_name: TRPM4
               theta_stop: 0.018 
                    nperm: 10000 
                     p_ks: 0.83 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.84 
                   p_cons: 0.96 
      ci_cons_bounds_left: 0.96 
     ci_cons_bounds_right: 0.96 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 29 percent done.
TRIO
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.743651e-02	ci left: 1.324713e-01	ci right 1.461396e-01	k: 1392	n:10000
Cons ci ratio: 8.112025e-02	ci left: 1.815648e-01	ci right 1.970166e-01	k: 1892	n:10000
KS ci ratio: 2.013935e-01	ci left: 3.281488e-02	ci right 4.025825e-02	k: 364	n:10000
TRIO   10000 perm   2 sec   (4078 perm/sec)   p_kst 3.640000e-02   p_cons 1.892000e-01   p_joint 1.392000e-01

Joint ci ratio: 6.665021e-02	ci left: 1.425134e-01	ci right 1.523893e-01	k: 2948	n:20000
Cons ci ratio: 5.805281e-02	ci left: 1.802328e-01	ci right 1.910587e-01	k: 3712	n:20000
KS ci ratio: 1.379597e-01	ci left: 3.611746e-02	ci right 4.151767e-02	k: 775	n:20000
TRIO   20000 perm   5 sec   (3700 perm/sec)   p_kst 3.875000e-02   p_cons 1.856000e-01   p_joint 1.474000e-01

Joint ci ratio: 7.124208e-02	ci left: 8.839161e-02	ci right 9.495438e-02	k: 2749	n:30000
Cons ci ratio: 4.757592e-02	ci left: 1.801247e-01	ci right 1.889365e-01	k: 5535	n:30000
KS ci ratio: 1.141318e-01	ci left: 3.567012e-02	ci right 4.001997e-02	k: 1134	n:30000
TRIO   30000 perm   8 sec   (3584 perm/sec)   p_kst 3.780000e-02   p_cons 1.845000e-01   p_joint 9.163333e-02

Joint ci ratio: 6.412086e-02	ci left: 8.270349e-02	ci right 8.820687e-02	k: 3417	n:40000
Cons ci ratio: 4.133716e-02	ci left: 1.797421e-01	ci right 1.873539e-01	k: 7341	n:40000
KS ci ratio: 9.964252e-02	ci left: 3.539093e-02	ci right 3.912664e-02	k: 1489	n:40000
TRIO   40000 perm   11 sec   (3507 perm/sec)   p_kst 3.722500e-02   p_cons 1.835250e-01   p_joint 8.542500e-02

Outputting figure to mutsig2_images.part000000000182/TRIO.2_9522_40000_0.037225_0.18352_0.085425.png
                gene_name: TRIO
               theta_stop: 0.100 
                    nperm: 40000 
                     p_ks: 0.037 
        ci_ks_bounds_left: 0.035 
       ci_ks_bounds_right: 0.039 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.085 
     ci_joint_bounds_left: 0.083 
    ci_joint_bounds_right: 0.088 

Current progress: 43 percent done.
TRIOBP
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.225565e-02	ci left: 3.505841e-01	ci right 3.694975e-01	k: 3600	n:10000
Cons ci ratio: 2.303600e-02	ci left: 7.346186e-01	ci right 7.518395e-01	k: 7433	n:10000
KS ci ratio: 2.213733e-01	ci left: 2.702777e-02	ci right 3.384941e-02	k: 303	n:10000
TRIOBP   10000 perm   2 sec   (4514 perm/sec)   p_kst 3.030000e-02   p_cons 7.433000e-01   p_joint 3.600000e-01

Joint ci ratio: 2.767220e-02	ci left: 4.938458e-01	ci right 5.077540e-01	k: 10016	n:20000
Cons ci ratio: 1.539709e-02	ci left: 7.582537e-01	ci right 7.700694e-01	k: 15284	n:20000
KS ci ratio: 1.595400e-01	ci left: 2.695830e-02	ci right 3.167987e-02	k: 585	n:20000
TRIOBP   20000 perm   5 sec   (4117 perm/sec)   p_kst 2.925000e-02   p_cons 7.642000e-01   p_joint 5.008000e-01

Joint ci ratio: 2.350790e-02	ci left: 4.753316e-01	ci right 4.866721e-01	k: 14430	n:30000
Cons ci ratio: 1.331863e-02	ci left: 7.377804e-01	ci right 7.477059e-01	k: 22283	n:30000
KS ci ratio: 1.299606e-01	ci left: 2.751748e-02	ci right 3.137436e-02	k: 882	n:30000
TRIOBP   30000 perm   8 sec   (3966 perm/sec)   p_kst 2.940000e-02   p_cons 7.427667e-01   p_joint 4.810000e-01

Joint ci ratio: 2.125550e-02	ci left: 4.546318e-01	ci right 4.644241e-01	k: 18381	n:40000
Cons ci ratio: 1.154461e-02	ci left: 7.381096e-01	ci right 7.467052e-01	k: 29697	n:40000
KS ci ratio: 1.122715e-01	ci left: 2.791220e-02	ci right 3.125656e-02	k: 1182	n:40000
TRIOBP   40000 perm   10 sec   (3866 perm/sec)   p_kst 2.955000e-02   p_cons 7.424250e-01   p_joint 4.595250e-01

Joint ci ratio: 1.972781e-02	ci left: 4.368613e-01	ci right 4.455855e-01	k: 22061	n:50000
Cons ci ratio: 1.035889e-02	ci left: 7.373371e-01	ci right 7.450349e-01	k: 37060	n:50000
KS ci ratio: 9.930849e-02	ci left: 2.871727e-02	ci right 3.173760e-02	k: 1510	n:50000
TRIOBP   50000 perm   13 sec   (3785 perm/sec)   p_kst 3.020000e-02   p_cons 7.412000e-01   p_joint 4.412200e-01

Outputting figure to mutsig2_images.part000000000182/TRIOBP.2_7484_50000_0.0302_0.7412_0.44122.png
                gene_name: TRIOBP
               theta_stop: 0.099 
                    nperm: 50000 
                     p_ks: 0.030 
        ci_ks_bounds_left: 0.029 
       ci_ks_bounds_right: 0.032 
                   p_cons: 0.74 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.75 
                  p_joint: 0.44 
     ci_joint_bounds_left: 0.44 
    ci_joint_bounds_right: 0.45 

Current progress: 57 percent done.
TRO
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.882633e-02	ci left: 1.557113e-01	ci right 1.702856e-01	k: 1629	n:10000
Cons ci ratio: 8.830905e-02	ci left: 1.572823e-01	ci right 1.719136e-01	k: 1645	n:10000
KS ci ratio: 5.853744e-02	ci left: 3.004459e-01	ci right 3.186652e-01	k: 3095	n:10000
TRO   10000 perm   2 sec   (5437 perm/sec)   p_kst 3.095000e-01   p_cons 1.645000e-01   p_joint 1.629000e-01

Outputting figure to mutsig2_images.part000000000182/TRO.2_4479_10000_0.3095_0.1645_0.1629.png
                gene_name: TRO
               theta_stop: 0.089 
                    nperm: 10000 
                     p_ks: 0.31 
        ci_ks_bounds_left: 0.30 
       ci_ks_bounds_right: 0.32 
                   p_cons: 0.16 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.17 
                  p_joint: 0.16 
     ci_joint_bounds_left: 0.16 
    ci_joint_bounds_right: 0.17 

Current progress: 71 percent done.
TRPS1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 4.318138e-02	ci left: 4.419113e-01	ci right 4.615169e-01	k: 4517	n:10000
KS ci ratio: 3.154520e-02	ci left: 5.972468e-01	ci right 6.164909e-01	k: 6069	n:10000
TRPS1   10000 perm   2 sec   (5796 perm/sec)   p_kst 6.069000e-01   p_cons 4.517000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000182/TRPS1.2_3909_10000_0.6069_0.4517_1.png
                gene_name: TRPS1
               theta_stop: 0.043 
                    nperm: 10000 
                     p_ks: 0.61 
        ci_ks_bounds_left: 0.60 
       ci_ks_bounds_right: 0.62 
                   p_cons: 0.45 
      ci_cons_bounds_left: 0.44 
     ci_cons_bounds_right: 0.46 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 86 percent done.
TRPV3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.592994e-02	ci left: 8.513105e-01	ci right 8.650802e-01	k: 8583	n:10000
Cons ci ratio: 1.487993e-02	ci left: 8.674390e-01	ci right 8.805423e-01	k: 8741	n:10000
KS ci ratio: 3.799760e-02	ci left: 5.056516e-01	ci right 5.253394e-01	k: 5155	n:10000
TRPV3   10000 perm   2 sec   (6266 perm/sec)   p_kst 5.155000e-01   p_cons 8.741000e-01   p_joint 8.583000e-01

Outputting figure to mutsig2_images.part000000000182/TRPV3.2_2441_10000_0.5155_0.8741_0.8583.png
                gene_name: TRPV3
               theta_stop: 0.038 
                    nperm: 10000 
                     p_ks: 0.52 
        ci_ks_bounds_left: 0.51 
       ci_ks_bounds_right: 0.53 
                   p_cons: 0.87 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.88 
                  p_joint: 0.86 
     ci_joint_bounds_left: 0.85 
    ci_joint_bounds_right: 0.87 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000182
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 182 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1725>
Subject: Job 8704402: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1725>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000183> was used as the working directory.
Started at Thu Nov 15 19:37:24 2012
Results reported at Thu Nov 15 19:39:10 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000183.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000183.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 183  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000183.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    101.64 sec.
    Max Memory :      5726 MB
    Max Swap   :      8491 MB

    Max Processes  :         7
    Max Threads    :        71

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
183
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 183
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 183: processing genes 16466 - 16555
Calculating significance of each gene.
Using projection method.
16466	TSG101	1
16467	TSGA10	1
16468	TSGA10IP	1
16469	TSGA13	1
16470	TSGA14	1
16471	TSHB	1
16472	TSHR	3.285917e-02
16473	TSHZ1	1
16474	TSHZ2	2.065876e-01
16475	TSHZ3	1
16476	TSKS	1
16477	TSKU	1
16478	TSLP	1
16479	TSN	1
16480	TSNARE1	1
16481	TSNAX	1
16482	TSNAXIP1	1
16483	TSPAN1	1
16484	TSPAN10	1
16485	TSPAN11	1
16486	TSPAN12	1
16487	TSPAN13	1
16488	TSPAN14	1.601193e-02
16489	TSPAN15	6.587212e-02
16490	TSPAN16	1
16491	TSPAN17	1
16492	TSPAN18	1
16493	TSPAN19	1
16494	TSPAN2	1
16495	TSPAN3	1
16496	TSPAN31	1
16497	TSPAN32	1
16498	TSPAN33	1.124611e-02
16499	TSPAN4	2.093582e-02
16500	TSPAN5	1
16501	TSPAN6	1
16502	TSPAN7	1
16503	TSPAN8	9.848061e-02
16504	TSPAN9	1
16505	TSPO	1
16506	TSPO2	1
16507	TSPYL1	1
In gene TSPYL2 the following bins exceed PROBCAP:
    THCA-EL-A3D5-TP	categ 6	N = 1765    n = 1	mu =   2.33e-07
16508	TSPYL2	2.470388e-02
16509	TSPYL4	1
16510	TSPYL5	1
16511	TSPYL6	1
16512	TSR1	2.486188e-01
16513	TSR2	1
16514	TSSC1	1
16515	TSSC4	1
16516	TSSK1B	1
16517	TSSK2	1
16518	TSSK3	1
16519	TSSK4	1
16520	TSSK6	1
16521	TST	1
16522	TSTA3	1
16523	TSTD2	1
16524	TTBK1	1
16525	TTBK2	4.159950e-01
16526	TTC1	1
16527	TTC12	1.969668e-01
16528	TTC13	1
16529	TTC14	4.549934e-02
16530	TTC15	1
16531	TTC16	1.111491e-01
16532	TTC17	1
16533	TTC18	1
16534	TTC19	1
16535	TTC21A	1
16536	TTC21B	3.141600e-01
16537	TTC22	1
16538	TTC23	1
16539	TTC23L	1
16540	TTC24	1
16541	TTC25	1
16542	TTC26	1
16543	TTC27	2.731384e-01
16544	TTC29	1
16545	TTC3	4.904413e-01
16546	TTC30A	1
16547	TTC30B	8.763138e-02
16548	TTC31	1
16549	TTC32	1
16550	TTC33	1
In gene TTC35 the following bins exceed PROBCAP:
    THCA-FE-A233-TP	categ 5	N = 396     n = 1	mu =   1.41e-07
16551	TTC35	2.337496e-02
16552	TTC36	1.919623e-02
16553	TTC37	4.786671e-01
16554	TTC38	9.304092e-02
16555	TTC39A	1
Done

Running MutSig 2:
Scatter job 183: processing genes 16466 - 16555
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TSHR
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.974662e-02	ci left: 4.831544e-01	ci right 5.028497e-01	k: 4930	n:10000
Cons ci ratio: 1.309804e-01	ci left: 7.679184e-02	ci right 8.765300e-02	k: 821	n:10000
KS ci ratio: 4.752422e-02	ci left: 3.951583e-01	ci right 4.144971e-01	k: 4048	n:10000
TSHR   10000 perm   2 sec   (6662 perm/sec)   p_kst 4.048000e-01   p_cons 8.210000e-02   p_joint 4.930000e-01

Joint ci ratio: 1.373169e-02	ci left: 7.973684e-01	ci right 8.084434e-01	k: 16059	n:20000
Cons ci ratio: 9.345775e-02	ci left: 7.705916e-02	ci right 8.466322e-02	k: 1616	n:20000
KS ci ratio: 3.380393e-02	ci left: 3.951945e-01	ci right 4.088340e-01	k: 8040	n:20000
TSHR   20000 perm   5 sec   (3935 perm/sec)   p_kst 4.020000e-01   p_cons 8.080000e-02   p_joint 8.029500e-01

Outputting figure to mutsig2_images.part000000000183/TSHR.2_2472_20000_0.402_0.0808_0.80295.png
                gene_name: TSHR
               theta_stop: 0.093 
                    nperm: 20000 
                     p_ks: 0.40 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.41 
                   p_cons: 0.081 
      ci_cons_bounds_left: 0.077 
     ci_cons_bounds_right: 0.085 
                  p_joint: 0.80 
     ci_joint_bounds_left: 0.80 
    ci_joint_bounds_right: 0.81 

Current progress: 33 percent done.
TSPYL2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.913932e-02	ci left: 3.792292e-01	ci right 3.984357e-01	k: 3888	n:10000
Cons ci ratio: 2.722952e-02	ci left: 6.652165e-01	ci right 6.836817e-01	k: 6745	n:10000
KS ci ratio: 9.364237e-02	ci left: 1.420738e-01	ci right 1.561313e-01	k: 1490	n:10000
TSPYL2   10000 perm   1 sec   (7114 perm/sec)   p_kst 1.490000e-01   p_cons 6.745000e-01   p_joint 3.888000e-01

Outputting figure to mutsig2_images.part000000000183/TSPYL2.2_2110_10000_0.149_0.6745_0.3888.png
                gene_name: TSPYL2
               theta_stop: 0.094 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.67 
      ci_cons_bounds_left: 0.67 
     ci_cons_bounds_right: 0.68 
                  p_joint: 0.39 
     ci_joint_bounds_left: 0.38 
    ci_joint_bounds_right: 0.40 

Current progress: 67 percent done.
TTC14
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.607365e-02	ci left: 8.490671e-01	ci right 8.629248e-01	k: 8561	n:10000
Cons ci ratio: 5.711691e-02	ci left: 3.109600e-01	ci right 3.293449e-01	k: 3201	n:10000
KS ci ratio: 2.686446e-02	ci left: 6.711587e-01	ci right 6.895361e-01	k: 6804	n:10000
TTC14   10000 perm   1 sec   (6973 perm/sec)   p_kst 6.804000e-01   p_cons 3.201000e-01   p_joint 8.561000e-01

Outputting figure to mutsig2_images.part000000000183/TTC14.2_2391_10000_0.6804_0.3201_0.8561.png
                gene_name: TTC14
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.68 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.69 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 0.86 
     ci_joint_bounds_left: 0.85 
    ci_joint_bounds_right: 0.86 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000183
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 183 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1652>
Subject: Job 8704404: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1652>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000184> was used as the working directory.
Started at Thu Nov 15 19:37:38 2012
Results reported at Thu Nov 15 19:43:00 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000184.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000184.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 184  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000184.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    348.49 sec.
    Max Memory :      5941 MB
    Max Swap   :      8696 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
184
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 184
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 184: processing genes 16556 - 16646
Calculating significance of each gene.
Using projection method.
16556	TTC39B	1
16557	TTC39C	8.071178e-03
16558	TTC4	1
16559	TTC5	1
16560	TTC7A	3.210267e-01
16561	TTC7B	1
16562	TTC8	2.117614e-01
16563	TTC9	1
16564	TTC9B	1
16565	TTC9C	1
16566	TTF1	1
16567	TTF2	3.028785e-01
16568	TTK	1.769860e-01
16569	TTL	1.481379e-01
16570	TTLL1	1
16571	TTLL10	1
16572	TTLL11	1.038554e-01
16573	TTLL12	1
16574	TTLL13	1
16575	TTLL2	1
16576	TTLL3	2.904141e-01
16577	TTLL4	1.933453e-01
16578	TTLL5	2.709759e-01
16579	TTLL6	1
16580	TTLL7	2.969390e-01
16581	TTLL8	1
16582	TTLL9	1
In gene TTN the following bins exceed PROBCAP:
    THCA-DJ-A2Q3-TP	categ 6	N = 108175  n = 1	mu =   1.36e-07
16583	TTN	9.999947e-01
16584	TTPA	1
16585	TTPAL	1
16586	TTR	1
16587	TTYH1	1
16588	TTYH2	1
16589	TTYH3	1
16590	TUB	1
16591	TUBA1A	1
16592	TUBA1B	1
16593	TUBA1C	1
16594	TUBA3C	1.658714e-01
16595	TUBA3D	1
16596	TUBA3E	1
16597	TUBA4A	1
16598	TUBA8	1
16599	TUBAL3	1
16600	TUBB	1
16601	TUBB1	1
16602	TUBB2A	1
16603	TUBB2B	1.352510e-01
16604	TUBB2C	1.453075e-01
16605	TUBB3	1
16606	TUBB4	1
16607	TUBB4Q	1
16608	TUBB6	1
16609	TUBB8	1
16610	TUBD1	1
16611	TUBE1	1
16612	TUBG1	1.785062e-01
16613	TUBG2	1
16614	TUBGCP2	1
16615	TUBGCP3	1
16616	TUBGCP4	9.212922e-02
16617	TUBGCP5	1
16618	TUBGCP6	4.079524e-01
16619	TUFM	1
16620	TUFT1	1
16621	TULP1	1
16622	TULP2	1.625277e-01
16623	TULP3	1
16624	TULP4	8.956370e-02
16625	TUSC2	1
16626	TUSC3	1
16627	TUSC5	1
16628	TUT1	3.030105e-02
16629	TWF1	1
16630	TWF2	1
16631	TWIST1	3.359462e-02
16632	TWISTNB	9.956343e-02
16633	TWSG1	1
16634	TXK	1
16635	TXLNA	1
16636	TXLNB	1
16637	TXLNG	1
16638	TXN	1
16639	TXN2	1
16640	TXNDC11	1
16641	TXNDC12	1
16642	TXNDC15	1
16643	TXNDC16	1
16644	TXNDC17	1
16645	TXNDC2	1.012225e-03
16646	TXNDC3	1
Done

Running MutSig 2:
Scatter job 184: processing genes 16556 - 16646
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TTN
Processing conservation and coverage...
8% 17% 26% 35% 44% 53% 62% 71% 80% 89% 98% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.875794e-02	ci left: 8.059280e-01	ci right 8.212889e-01	k: 8137	n:10000
Cons ci ratio: 3.422405e-02	ci left: 5.576212e-01	ci right 5.771396e-01	k: 5674	n:10000
KS ci ratio: 3.276191e-02	ci left: 5.789809e-01	ci right 5.983674e-01	k: 5887	n:10000
TTN   10000 perm   15 sec   (656 perm/sec)   p_kst 5.887000e-01   p_cons 5.674000e-01   p_joint 8.137000e-01

Outputting figure to mutsig2_images.part000000000184/TTN.13_111433_10000_0.5887_0.5674_0.8137.png
                gene_name: TTN
               theta_stop: 0.034 
                    nperm: 10000 
                     p_ks: 0.59 
        ci_ks_bounds_left: 0.58 
       ci_ks_bounds_right: 0.60 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.81 
     ci_joint_bounds_left: 0.81 
    ci_joint_bounds_right: 0.82 

Current progress: 20 percent done.
TXNDC2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.141929e-02	ci left: 1.481542e-01	ci right 1.624472e-01	k: 1552	n:10000
Cons ci ratio: 4.427870e-02	ci left: 4.295415e-01	ci right 4.490938e-01	k: 4393	n:10000
KS ci ratio: 1.057999e-01	ci left: 1.142783e-01	ci right 1.271436e-01	k: 1206	n:10000
TXNDC2   10000 perm   2 sec   (6111 perm/sec)   p_kst 1.206000e-01   p_cons 4.393000e-01   p_joint 1.552000e-01

Joint ci ratio: 5.718452e-02	ci left: 1.847812e-01	ci right 1.957090e-01	k: 3804	n:20000
Cons ci ratio: 3.343762e-02	ci left: 4.004296e-01	ci right 4.140973e-01	k: 8145	n:20000
KS ci ratio: 7.370628e-02	ci left: 1.193146e-01	ci right 1.284950e-01	k: 2477	n:20000
TXNDC2   20000 perm   4 sec   (5402 perm/sec)   p_kst 1.238500e-01   p_cons 4.072500e-01   p_joint 1.902000e-01

Outputting figure to mutsig2_images.part000000000184/TXNDC2.3_1670_20000_0.12385_0.40725_0.1902.png
                gene_name: TXNDC2
               theta_stop: 0.074 
                    nperm: 20000 
                     p_ks: 0.12 
        ci_ks_bounds_left: 0.12 
       ci_ks_bounds_right: 0.13 
                   p_cons: 0.41 
      ci_cons_bounds_left: 0.40 
     ci_cons_bounds_right: 0.41 
                  p_joint: 0.19 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.20 

Current progress: 40 percent done.
TTC39C
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.326536e-02	ci left: 7.307786e-01	ci right 7.480817e-01	k: 7395	n:10000
Cons ci ratio: 1.607365e-02	ci left: 8.490671e-01	ci right 8.629248e-01	k: 8561	n:10000
KS ci ratio: 6.250251e-02	ci left: 2.733932e-01	ci right 2.911338e-01	k: 2822	n:10000
TTC39C   10000 perm   2 sec   (6149 perm/sec)   p_kst 2.822000e-01   p_cons 8.561000e-01   p_joint 7.395000e-01

Outputting figure to mutsig2_images.part000000000184/TTC39C.2_1808_10000_0.2822_0.8561_0.7395.png
                gene_name: TTC39C
               theta_stop: 0.063 
                    nperm: 10000 
                     p_ks: 0.28 
        ci_ks_bounds_left: 0.27 
       ci_ks_bounds_right: 0.29 
                   p_cons: 0.86 
      ci_cons_bounds_left: 0.85 
     ci_cons_bounds_right: 0.86 
                  p_joint: 0.74 
     ci_joint_bounds_left: 0.73 
    ci_joint_bounds_right: 0.75 

Current progress: 60 percent done.
TULP4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.272679e-02	ci left: 8.987765e-01	ci right 9.103866e-01	k: 9047	n:10000
Cons ci ratio: 3.775496e-02	ci left: 5.088528e-01	ci right 5.285363e-01	k: 5187	n:10000
KS ci ratio: 4.235415e-02	ci left: 4.514920e-01	ci right 4.711305e-01	k: 4613	n:10000
TULP4   10000 perm   2 sec   (5268 perm/sec)   p_kst 4.613000e-01   p_cons 5.187000e-01   p_joint 9.047000e-01

Outputting figure to mutsig2_images.part000000000184/TULP4.2_4688_10000_0.4613_0.5187_0.9047.png
                gene_name: TULP4
               theta_stop: 0.042 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.52 
      ci_cons_bounds_left: 0.51 
     ci_cons_bounds_right: 0.53 
                  p_joint: 0.90 
     ci_joint_bounds_left: 0.90 
    ci_joint_bounds_right: 0.91 

Current progress: 80 percent done.
TUT1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.594231e-02	ci left: 6.862735e-01	ci right 7.044125e-01	k: 6954	n:10000
KS ci ratio: 4.392105e-02	ci left: 4.335311e-01	ci right 4.531019e-01	k: 4433	n:10000
TUT1   10000 perm   2 sec   (5755 perm/sec)   p_kst 4.433000e-01   p_cons 6.954000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000184/TUT1.2_2775_10000_0.4433_0.6954_1.png
                gene_name: TUT1
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.44 
        ci_ks_bounds_left: 0.43 
       ci_ks_bounds_right: 0.45 
                   p_cons: 0.70 
      ci_cons_bounds_left: 0.69 
     ci_cons_bounds_right: 0.70 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000184
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 184 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1541>
Subject: Job 8704405: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1541>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000185> was used as the working directory.
Started at Thu Nov 15 19:37:45 2012
Results reported at Thu Nov 15 20:45:36 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000185.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000185.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 185  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000185.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   4323.75 sec.
    Max Memory :      5781 MB
    Max Swap   :      8587 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
185
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 185
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 185: processing genes 16647 - 16736
Calculating significance of each gene.
Using projection method.
16647	TXNDC5	1
16648	TXNDC6	1
16649	TXNDC8	1
16650	TXNDC9	1
16651	TXNIP	1
16652	TXNL1	1
16653	TXNL4A	1
16654	TXNL4B	1
16655	TXNRD1	1.167948e-01
16656	TXNRD2	1
16657	TXNRD3IT1	1
16658	TYK2	1
16659	TYMP	1.126648e-01
16660	TYMS	1
16661	TYR	1
16662	TYRO3	1
16663	TYROBP	1
16664	TYRP1	1.047974e-01
In gene TYSND1 the following bins exceed PROBCAP:
    THCA-FE-A3PB-TP	categ 6	N = 583     n = 1	mu =   1.02e-07
    THCA-FY-A3RA-TP	categ 6	N = 759     n = 1	mu =   2.02e-07
16665	TYSND1	2.769061e-03
16666	TYW1	1
16667	TYW1B	1
16668	TYW3	1
16669	U2AF1	1
16670	U2AF1L4	1
16671	U2AF2	1.797137e-01
16672	UACA	1
16673	UAP1	1
16674	UAP1L1	1
16675	UBA1	1
16676	UBA2	1
16677	UBA3	1.110971e-01
16678	UBA5	1
16679	UBA52	1
16680	UBA6	2.162018e-01
16681	UBA7	1
16682	UBAC1	1.230746e-01
16683	UBAC2	1
16684	UBAP1	1
16685	UBAP2	1
16686	UBAP2L	4.275134e-01
16687	UBASH3A	2.064006e-01
16688	UBASH3B	1
16689	UBB	1
16690	UBC	1
16691	UBD	1
16692	UBE2A	1
16693	UBE2B	1
16694	UBE2C	1
16695	UBE2CBP	1
16696	UBE2D1	1
16697	UBE2D2	1
16698	UBE2D3	1
16699	UBE2D4	1
16700	UBE2E1	1
16701	UBE2E2	1
16702	UBE2E3	1
16703	UBE2F	5.907835e-02
16704	UBE2G1	1
16705	UBE2G2	1
16706	UBE2H	1
16707	UBE2I	1
16708	UBE2J1	1
16709	UBE2J2	1
16710	UBE2K	1
16711	UBE2L3	1
16712	UBE2L6	1
16713	UBE2M	1
16714	UBE2N	1
16715	UBE2NL	1
16716	UBE2O	7.420397e-02
16717	UBE2Q1	1
16718	UBE2Q2	1
16719	UBE2R2	1
16720	UBE2S	1
16721	UBE2T	1
16722	UBE2U	1
16723	UBE2V1	1
16724	UBE2V2	1
16725	UBE2W	3.193136e-02
16726	UBE2Z	1
16727	UBE3A	1
16728	UBE3B	1
16729	UBE3C	1
16730	UBE4A	1
16731	UBE4B	1
16732	UBFD1	1
16733	UBIAD1	1
16734	UBL3	1
16735	UBL4A	1
16736	UBL4B	1
Done

Running MutSig 2:
Scatter job 185: processing genes 16647 - 16736
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
TYSND1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.185349e-01	ci left: 2.774707e-03	ci right 5.327611e-03	k: 39	n:10000
Cons ci ratio: 1.237722e-02	ci left: 9.036042e-01	ci right 9.149561e-01	k: 9094	n:10000
KS ci ratio: 1.752551e+00	ci left: 1.089969e-04	ci right 1.023839e-03	k: 4	n:10000
TYSND1   10000 perm   3 sec   (3982 perm/sec)   p_kst 4.000000e-04   p_cons 9.094000e-01   p_joint 3.900000e-03

Joint ci ratio: 9.235139e-01	ci left: 4.952318e-04	ci right 1.360585e-03	k: 17	n:20000
Cons ci ratio: 9.368650e-03	ci left: 8.932135e-01	ci right 9.016705e-01	k: 17950	n:20000
KS ci ratio: 1.181570e+00	ci left: 2.397946e-04	ci right 9.193249e-04	k: 10	n:20000
TYSND1   20000 perm   11 sec   (1768 perm/sec)   p_kst 5.000000e-04   p_cons 8.975000e-01   p_joint 8.500000e-04

Joint ci ratio: 5.187146e-01	ci left: 1.410359e-03	ci right 2.423346e-03	k: 56	n:30000
Cons ci ratio: 7.550370e-03	ci left: 8.964144e-01	ci right 9.032413e-01	k: 26996	n:30000
KS ci ratio: 9.797223e-01	ci left: 2.798723e-04	ci right 8.245401e-04	k: 15	n:30000
TYSND1   30000 perm   13 sec   (2244 perm/sec)   p_kst 5.000000e-04   p_cons 8.998667e-01   p_joint 1.866667e-03

Joint ci ratio: 4.896017e-01	ci left: 1.210479e-03	ci right 2.014666e-03	k: 63	n:40000
Cons ci ratio: 6.170097e-03	ci left: 9.070010e-01	ci right 9.126393e-01	k: 36394	n:40000
KS ci ratio: 8.551789e-01	ci left: 3.054389e-04	ci right 7.721043e-04	k: 20	n:40000
TYSND1   40000 perm   16 sec   (2573 perm/sec)   p_kst 5.000000e-04   p_cons 9.098500e-01   p_joint 1.575000e-03

Joint ci ratio: 3.604356e-01	ci left: 1.935616e-03	ci right 2.803777e-03	k: 117	n:50000
Cons ci ratio: 5.484569e-03	ci left: 9.083285e-01	ci right 9.133437e-01	k: 45543	n:50000
KS ci ratio: 7.541931e-01	ci left: 3.397085e-04	ci right 7.618283e-04	k: 26	n:50000
TYSND1   50000 perm   18 sec   (2748 perm/sec)   p_kst 5.200000e-04   p_cons 9.108600e-01   p_joint 2.340000e-03

Joint ci ratio: 4.616953e-01	ci left: 9.243052e-04	ci right 1.492383e-03	k: 71	n:60000
Cons ci ratio: 5.001813e-03	ci left: 9.087102e-01	ci right 9.132833e-01	k: 54661	n:60000
KS ci ratio: 7.155059e-01	ci left: 3.237191e-04	ci right 6.940741e-04	k: 29	n:60000
TYSND1   60000 perm   21 sec   (2904 perm/sec)   p_kst 4.833333e-04   p_cons 9.110167e-01   p_joint 1.183333e-03

Joint ci ratio: 4.326349e-01	ci left: 9.190414e-04	ci right 1.438021e-03	k: 81	n:70000
Cons ci ratio: 4.623052e-03	ci left: 9.091552e-01	ci right 9.133821e-01	k: 63790	n:70000
KS ci ratio: 6.721064e-01	ci left: 3.245313e-04	ci right 6.619979e-04	k: 33	n:70000
TYSND1   70000 perm   23 sec   (3018 perm/sec)   p_kst 4.714286e-04   p_cons 9.112857e-01   p_joint 1.157143e-03

Joint ci ratio: 3.977718e-01	ci left: 9.721086e-04	ci right 1.465211e-03	k: 96	n:80000
Cons ci ratio: 4.317705e-03	ci left: 9.095485e-01	ci right 9.134966e-01	k: 72923	n:80000
KS ci ratio: 6.442910e-01	ci left: 3.151937e-04	ci right 6.229358e-04	k: 36	n:80000
TYSND1   80000 perm   26 sec   (3110 perm/sec)   p_kst 4.500000e-04   p_cons 9.115375e-01   p_joint 1.200000e-03

Joint ci ratio: 3.637262e-01	ci left: 1.055048e-03	ci right 1.533582e-03	k: 115	n:90000
Cons ci ratio: 4.079263e-03	ci left: 9.093228e-01	ci right 9.130507e-01	k: 82008	n:90000
KS ci ratio: 5.908145e-01	ci left: 3.457911e-04	ci right 6.435102e-04	k: 43	n:90000
TYSND1   90000 perm   29 sec   (3157 perm/sec)   p_kst 4.777778e-04   p_cons 9.112000e-01   p_joint 1.277778e-03

Joint ci ratio: 2.233814e-01	ci left: 2.727155e-03	ci right 3.422163e-03	k: 306	n:100000
Cons ci ratio: 3.868718e-03	ci left: 9.094705e-01	ci right 9.130056e-01	k: 91125	n:100000
KS ci ratio: 5.434621e-01	ci left: 3.797513e-04	ci right 6.705020e-04	k: 51	n:100000
TYSND1   100000 perm   31 sec   (3180 perm/sec)   p_kst 5.100000e-04   p_cons 9.112500e-01   p_joint 3.060000e-03

Joint ci ratio: 3.359278e-01	ci left: 1.029086e-03	ci right 1.452462e-03	k: 135	n:110000
Cons ci ratio: 3.917931e-03	ci left: 8.992199e-01	ci right 9.027589e-01	k: 99110	n:110000
KS ci ratio: 5.236963e-01	ci left: 3.766899e-04	ci right 6.507696e-04	k: 55	n:110000
TYSND1   110000 perm   34 sec   (3206 perm/sec)   p_kst 5.000000e-04   p_cons 9.010000e-01   p_joint 1.227273e-03

Joint ci ratio: 3.287630e-01	ci left: 9.891533e-04	ci right 1.385587e-03	k: 141	n:120000
Cons ci ratio: 3.760229e-03	ci left: 8.988597e-01	ci right 9.022542e-01	k: 108068	n:120000
KS ci ratio: 5.102129e-01	ci left: 3.670351e-04	ci right 6.247762e-04	k: 58	n:120000
TYSND1   120000 perm   37 sec   (3221 perm/sec)   p_kst 4.833333e-04   p_cons 9.005667e-01   p_joint 1.175000e-03

Joint ci ratio: 1.932887e-01	ci left: 2.849011e-03	ci right 3.465789e-03	k: 409	n:130000
Cons ci ratio: 3.612497e-03	ci left: 8.989375e-01	ci right 9.021984e-01	k: 117075	n:130000
KS ci ratio: 4.823943e-01	ci left: 3.859100e-04	ci right 6.372473e-04	k: 65	n:130000
TYSND1   130000 perm   40 sec   (3235 perm/sec)   p_kst 5.000000e-04   p_cons 9.005769e-01   p_joint 3.146154e-03

Joint ci ratio: 1.872255e-01	ci left: 2.829180e-03	ci right 3.420268e-03	k: 436	n:140000
Cons ci ratio: 3.482162e-03	ci left: 8.989417e-01	ci right 9.020845e-01	k: 126073	n:140000
KS ci ratio: 4.717946e-01	ci left: 3.771953e-04	ci right 6.157186e-04	k: 68	n:140000
TYSND1   140000 perm   43 sec   (3239 perm/sec)   p_kst 4.857143e-04   p_cons 9.005214e-01   p_joint 3.114286e-03

Joint ci ratio: 1.826892e-01	ci left: 2.780437e-03	ci right 3.345708e-03	k: 458	n:150000
Cons ci ratio: 3.372365e-03	ci left: 8.985513e-01	ci right 9.015932e-01	k: 135012	n:150000
KS ci ratio: 4.618640e-01	ci left: 3.696952e-04	ci right 5.970087e-04	k: 71	n:150000
TYSND1   150000 perm   46 sec   (3234 perm/sec)   p_kst 4.733333e-04   p_cons 9.000800e-01   p_joint 3.053333e-03

Joint ci ratio: 1.782814e-01	ci left: 2.743911e-03	ci right 3.286845e-03	k: 481	n:160000
Cons ci ratio: 3.266046e-03	ci left: 8.985574e-01	ci right 9.015031e-01	k: 144006	n:160000
KS ci ratio: 4.495466e-01	ci left: 3.687189e-04	ci right 5.875473e-04	k: 75	n:160000
TYSND1   160000 perm   50 sec   (3223 perm/sec)   p_kst 4.687500e-04   p_cons 9.000375e-01   p_joint 3.006250e-03

Joint ci ratio: 1.706550e-01	ci left: 2.830041e-03	ci right 3.363599e-03	k: 525	n:170000
Cons ci ratio: 3.172293e-03	ci left: 8.983866e-01	ci right 9.012468e-01	k: 152970	n:170000
KS ci ratio: 4.250761e-01	ci left: 3.941461e-04	ci right 6.117153e-04	k: 84	n:170000
TYSND1   170000 perm   53 sec   (3212 perm/sec)   p_kst 4.941176e-04   p_cons 8.998235e-01   p_joint 3.088235e-03

Joint ci ratio: 1.700226e-01	ci left: 2.694075e-03	ci right 3.199922e-03	k: 529	n:180000
Cons ci ratio: 3.080083e-03	ci left: 8.985937e-01	ci right 9.013712e-01	k: 161998	n:180000
KS ci ratio: 4.201654e-01	ci left: 3.821778e-04	ci right 5.900185e-04	k: 86	n:180000
TYSND1   180000 perm   56 sec   (3198 perm/sec)   p_kst 4.777778e-04   p_cons 8.999889e-01   p_joint 2.938889e-03

Joint ci ratio: 2.743068e-01	ci left: 9.265564e-04	ci right 1.225844e-03	k: 203	n:190000
Cons ci ratio: 2.995466e-03	ci left: 8.987800e-01	ci right 9.014815e-01	k: 171026	n:190000
KS ci ratio: 4.042160e-01	ci left: 3.950860e-04	ci right 5.996053e-04	k: 93	n:190000
TYSND1   190000 perm   60 sec   (3178 perm/sec)   p_kst 4.894737e-04   p_cons 9.001368e-01   p_joint 1.068421e-03

Joint ci ratio: 2.647433e-01	ci left: 9.501639e-04	ci right 1.244604e-03	k: 218	n:200000
Cons ci ratio: 2.920702e-03	ci left: 8.987473e-01	ci right 9.013811e-01	k: 180014	n:200000
KS ci ratio: 3.938763e-01	ci left: 3.978230e-04	ci right 5.971211e-04	k: 98	n:200000
TYSND1   200000 perm   63 sec   (3156 perm/sec)   p_kst 4.900000e-04   p_cons 9.000700e-01   p_joint 1.090000e-03

Joint ci ratio: 2.572178e-01	ci left: 9.627747e-04	ci right 1.251281e-03	k: 231	n:210000
Cons ci ratio: 2.848553e-03	ci left: 8.988910e-01	ci right 9.014599e-01	k: 189038	n:210000
KS ci ratio: 3.842915e-01	ci left: 4.003597e-04	ci right 5.948140e-04	k: 103	n:210000
TYSND1   210000 perm   67 sec   (3134 perm/sec)   p_kst 4.904762e-04   p_cons 9.001810e-01   p_joint 1.100000e-03

Joint ci ratio: 2.665906e-01	ci left: 8.510511e-04	ci right 1.116925e-03	k: 215	n:220000
Cons ci ratio: 2.782552e-03	ci left: 8.989537e-01	ci right 9.014630e-01	k: 198047	n:220000
KS ci ratio: 3.686670e-01	ci left: 4.192018e-04	ci right 6.125370e-04	k: 112	n:220000
TYSND1   220000 perm   71 sec   (3110 perm/sec)   p_kst 5.090909e-04   p_cons 9.002136e-01   p_joint 9.772727e-04

Joint ci ratio: 2.415788e-01	ci left: 1.005425e-03	ci right 1.285652e-03	k: 262	n:230000
Cons ci ratio: 2.718565e-03	ci left: 8.991689e-01	ci right 9.016210e-01	k: 207092	n:230000
KS ci ratio: 3.607719e-01	ci left: 4.207228e-04	ci right 6.096276e-04	k: 117	n:230000
TYSND1   230000 perm   74 sec   (3088 perm/sec)   p_kst 5.086957e-04   p_cons 9.004000e-01   p_joint 1.139130e-03

Joint ci ratio: 2.379881e-01	ci left: 9.948621e-04	ci right 1.267416e-03	k: 270	n:240000
Cons ci ratio: 2.659221e-03	ci left: 8.993374e-01	ci right 9.017362e-01	k: 216130	n:240000
KS ci ratio: 3.533632e-01	ci left: 4.221574e-04	ci right 6.069208e-04	k: 122	n:240000
TYSND1   240000 perm   78 sec   (3062 perm/sec)   p_kst 5.083333e-04   p_cons 9.005417e-01   p_joint 1.125000e-03

Joint ci ratio: 2.316614e-01	ci left: 1.011539e-03	ci right 1.280241e-03	k: 285	n:250000
Cons ci ratio: 2.604528e-03	ci left: 8.994286e-01	ci right 9.017781e-01	k: 225152	n:250000
KS ci ratio: 3.463929e-01	ci left: 4.235138e-04	ci right 6.043945e-04	k: 127	n:250000
TYSND1   250000 perm   82 sec   (3034 perm/sec)   p_kst 5.080000e-04   p_cons 9.006080e-01   p_joint 1.140000e-03

Joint ci ratio: 2.281013e-01	ci left: 1.005256e-03	ci right 1.267607e-03	k: 294	n:260000
Cons ci ratio: 2.555544e-03	ci left: 8.993392e-01	ci right 9.016442e-01	k: 234129	n:260000
KS ci ratio: 3.437201e-01	ci left: 4.142501e-04	ci right 5.895055e-04	k: 129	n:260000
TYSND1   260000 perm   87 sec   (2986 perm/sec)   p_kst 4.961538e-04   p_cons 9.004962e-01   p_joint 1.130769e-03

Joint ci ratio: 2.239640e-01	ci left: 1.006458e-03	ci right 1.263702e-03	k: 305	n:270000
Cons ci ratio: 2.508858e-03	ci left: 8.992829e-01	ci right 9.015455e-01	k: 243113	n:270000
KS ci ratio: 3.398228e-01	ci left: 4.090649e-04	ci right 5.797335e-04	k: 132	n:270000
TYSND1   270000 perm   91 sec   (2959 perm/sec)   p_kst 4.888889e-04   p_cons 9.004185e-01   p_joint 1.129630e-03

Joint ci ratio: 2.384481e-01	ci left: 8.493729e-04	ci right 1.082584e-03	k: 269	n:280000
Cons ci ratio: 2.463903e-03	ci left: 8.992848e-01	ci right 9.015069e-01	k: 252112	n:280000
KS ci ratio: 3.348257e-01	ci left: 4.075311e-04	ci right 5.745201e-04	k: 136	n:280000
TYSND1   280000 perm   95 sec   (2935 perm/sec)   p_kst 4.857143e-04   p_cons 9.004000e-01   p_joint 9.607143e-04

Joint ci ratio: 2.341513e-01	ci left: 8.525257e-04	ci right 1.081774e-03	k: 279	n:290000
Cons ci ratio: 2.421002e-03	ci left: 8.993078e-01	ci right 9.014911e-01	k: 261117	n:290000
KS ci ratio: 3.312199e-01	ci left: 4.029581e-04	ci right 5.659160e-04	k: 139	n:290000
TYSND1   290000 perm   100 sec   (2909 perm/sec)   p_kst 4.793103e-04   p_cons 9.004034e-01   p_joint 9.620690e-04

Joint ci ratio: 2.316836e-01	ci left: 8.429407e-04	ci right 1.066880e-03	k: 285	n:300000
Cons ci ratio: 2.382919e-03	ci left: 8.991286e-01	ci right 9.012770e-01	k: 270062	n:300000
KS ci ratio: 3.265877e-01	ci left: 4.017586e-04	ci right 5.614826e-04	k: 143	n:300000
TYSND1   300000 perm   104 sec   (2882 perm/sec)   p_kst 4.766667e-04   p_cons 9.002067e-01   p_joint 9.500000e-04

Joint ci ratio: 2.269700e-01	ci left: 8.522356e-04	ci right 1.073394e-03	k: 297	n:310000
Cons ci ratio: 2.345813e-03	ci left: 8.990196e-01	ci right 9.011342e-01	k: 279025	n:310000
KS ci ratio: 3.221446e-01	ci left: 4.006514e-04	ci right 5.573206e-04	k: 147	n:310000
TYSND1   310000 perm   109 sec   (2843 perm/sec)   p_kst 4.741935e-04   p_cons 9.000806e-01   p_joint 9.580645e-04

Joint ci ratio: 2.232549e-01	ci left: 8.550914e-04	ci right 1.072859e-03	k: 307	n:320000
Cons ci ratio: 2.311106e-03	ci left: 8.988612e-01	ci right 9.009440e-01	k: 287970	n:320000
KS ci ratio: 3.168370e-01	ci left: 4.025033e-04	ci right 5.567780e-04	k: 152	n:320000
TYSND1   320000 perm   114 sec   (2805 perm/sec)   p_kst 4.750000e-04   p_cons 8.999063e-01   p_joint 9.593750e-04

Joint ci ratio: 2.190281e-01	ci left: 8.635296e-04	ci right 1.078722e-03	k: 319	n:330000
Cons ci ratio: 2.276128e-03	ci left: 8.988527e-01	ci right 9.009039e-01	k: 296961	n:330000
KS ci ratio: 3.108008e-01	ci left: 4.070565e-04	ci right 5.595147e-04	k: 158	n:330000
TYSND1   330000 perm   119 sec   (2779 perm/sec)   p_kst 4.787879e-04   p_cons 8.998818e-01   p_joint 9.666667e-04

Joint ci ratio: 2.173382e-01	ci left: 8.520333e-04	ci right 1.062504e-03	k: 324	n:340000
Cons ci ratio: 2.242582e-03	ci left: 8.988538e-01	ci right 9.008747e-01	k: 305955	n:340000
KS ci ratio: 3.098298e-01	ci left: 3.977961e-04	ci right 5.462284e-04	k: 159	n:340000
TYSND1   340000 perm   124 sec   (2751 perm/sec)   p_kst 4.676471e-04   p_cons 8.998676e-01   p_joint 9.529412e-04

Joint ci ratio: 2.109414e-01	ci left: 8.817699e-04	ci right 1.092347e-03	k: 344	n:350000
Cons ci ratio: 2.208618e-03	ci left: 8.990071e-01	ci right 9.009977e-01	k: 315002	n:350000
KS ci ratio: 3.005768e-01	ci left: 4.128151e-04	ci right 5.613733e-04	k: 169	n:350000
TYSND1   350000 perm   128 sec   (2724 perm/sec)   p_kst 4.828571e-04   p_cons 9.000057e-01   p_joint 9.828571e-04

Joint ci ratio: 2.076565e-01	ci left: 8.862306e-04	ci right 1.094159e-03	k: 355	n:360000
Cons ci ratio: 2.178132e-03	ci left: 8.989875e-01	ci right 9.009505e-01	k: 323990	n:360000
KS ci ratio: 2.954085e-01	ci left: 4.167690e-04	ci right 5.636883e-04	k: 175	n:360000
TYSND1   360000 perm   134 sec   (2696 perm/sec)   p_kst 4.861111e-04   p_cons 8.999722e-01   p_joint 9.861111e-04

Joint ci ratio: 2.053625e-01	ci left: 8.827818e-04	ci right 1.087325e-03	k: 363	n:370000
Cons ci ratio: 2.148873e-03	ci left: 8.989692e-01	ci right 9.009057e-01	k: 332978	n:370000
KS ci ratio: 2.921081e-01	ci left: 4.155192e-04	ci right 5.600588e-04	k: 179	n:370000
TYSND1   370000 perm   139 sec   (2667 perm/sec)   p_kst 4.837838e-04   p_cons 8.999405e-01   p_joint 9.810811e-04

Joint ci ratio: 2.017898e-01	ci left: 8.920179e-04	ci right 1.094663e-03	k: 376	n:380000
Cons ci ratio: 2.120391e-03	ci left: 8.989836e-01	ci right 9.008945e-01	k: 341978	n:380000
KS ci ratio: 2.835696e-01	ci left: 4.314432e-04	ci right 5.763506e-04	k: 190	n:380000
TYSND1   380000 perm   144 sec   (2643 perm/sec)   p_kst 5.000000e-04   p_cons 8.999421e-01   p_joint 9.894737e-04

Joint ci ratio: 1.981433e-01	ci left: 9.032464e-04	ci right 1.104286e-03	k: 390	n:390000
Cons ci ratio: 2.094204e-03	ci left: 8.988946e-01	ci right 9.007815e-01	k: 350938	n:390000
KS ci ratio: 2.799293e-01	ci left: 4.322954e-04	ci right 5.752964e-04	k: 195	n:390000
TYSND1   390000 perm   149 sec   (2620 perm/sec)   p_kst 5.000000e-04   p_cons 8.998410e-01   p_joint 1.000000e-03

Joint ci ratio: 1.959017e-01	ci left: 9.020553e-04	ci right 1.100288e-03	k: 399	n:400000
Cons ci ratio: 2.066639e-03	ci left: 8.990134e-01	ci right 9.008758e-01	k: 359979	n:400000
KS ci ratio: 2.771162e-01	ci left: 4.307896e-04	ci right 5.716107e-04	k: 199	n:400000
TYSND1   400000 perm   154 sec   (2596 perm/sec)   p_kst 4.975000e-04   p_cons 8.999475e-01   p_joint 9.975000e-04

Joint ci ratio: 1.939721e-01	ci left: 8.986137e-04	ci right 1.093915e-03	k: 407	n:410000
Cons ci ratio: 2.041293e-03	ci left: 8.990238e-01	ci right 9.008632e-01	k: 368978	n:410000
KS ci ratio: 2.743863e-01	ci left: 4.293641e-04	ci right 5.680980e-04	k: 203	n:410000
TYSND1   410000 perm   159 sec   (2572 perm/sec)   p_kst 4.951220e-04   p_cons 8.999463e-01   p_joint 9.926829e-04

Joint ci ratio: 1.916378e-01	ci left: 8.998784e-04	ci right 1.092827e-03	k: 417	n:420000
Cons ci ratio: 2.016485e-03	ci left: 8.990672e-01	ci right 9.008844e-01	k: 377991	n:420000
KS ci ratio: 2.697958e-01	ci left: 4.346711e-04	ci right 5.723724e-04	k: 210	n:420000
TYSND1   420000 perm   165 sec   (2549 perm/sec)   p_kst 5.000000e-04   p_cons 8.999786e-01   p_joint 9.928571e-04

Joint ci ratio: 1.896077e-01	ci left: 8.988824e-04	ci right 1.089340e-03	k: 426	n:430000
Cons ci ratio: 1.993279e-03	ci left: 8.990434e-01	ci right 9.008395e-01	k: 386976	n:430000
KS ci ratio: 2.666549e-01	ci left: 4.354085e-04	ci right 5.714694e-04	k: 215	n:430000
TYSND1   430000 perm   170 sec   (2526 perm/sec)   p_kst 5.000000e-04   p_cons 8.999442e-01   p_joint 9.906977e-04

Joint ci ratio: 1.874257e-01	ci left: 9.001080e-04	ci right 1.088381e-03	k: 436	n:440000
Cons ci ratio: 1.971454e-03	ci left: 8.989661e-01	ci right 9.007423e-01	k: 395937	n:440000
KS ci ratio: 2.636212e-01	ci left: 4.361213e-04	ci right 5.705986e-04	k: 220	n:440000
TYSND1   440000 perm   176 sec   (2502 perm/sec)   p_kst 5.000000e-04   p_cons 8.998568e-01   p_joint 9.909091e-04

Joint ci ratio: 1.857337e-01	ci left: 8.970529e-04	ci right 1.082802e-03	k: 444	n:450000
Cons ci ratio: 1.949439e-03	ci left: 8.989748e-01	ci right 9.007312e-01	k: 404935	n:450000
KS ci ratio: 2.606887e-01	ci left: 4.368108e-04	ci right 5.697582e-04	k: 225	n:450000
TYSND1   450000 perm   182 sec   (2479 perm/sec)   p_kst 5.000000e-04   p_cons 8.998556e-01   p_joint 9.866667e-04

Joint ci ratio: 1.842905e-01	ci left: 8.920641e-04	ci right 1.075185e-03	k: 451	n:460000
Cons ci ratio: 1.928704e-03	ci left: 8.989309e-01	ci right 9.006684e-01	k: 413909	n:460000
KS ci ratio: 2.572954e-01	ci left: 4.395118e-04	ci right 5.712604e-04	k: 231	n:460000
TYSND1   460000 perm   187 sec   (2456 perm/sec)   p_kst 5.021739e-04   p_cons 8.998022e-01   p_joint 9.804348e-04

Joint ci ratio: 1.807255e-01	ci left: 9.096332e-04	ci right 1.092353e-03	k: 469	n:470000
Cons ci ratio: 1.908143e-03	ci left: 8.989338e-01	ci right 9.006528e-01	k: 422904	n:470000
KS ci ratio: 2.540312e-01	ci left: 4.421085e-04	ci right 5.726880e-04	k: 237	n:470000
TYSND1   470000 perm   193 sec   (2435 perm/sec)   p_kst 5.042553e-04   p_cons 8.997957e-01   p_joint 9.978723e-04

Joint ci ratio: 1.793951e-01	ci left: 9.046083e-04	ci right 1.084836e-03	k: 476	n:480000
Cons ci ratio: 1.888335e-03	ci left: 8.989262e-01	ci right 9.006273e-01	k: 431894	n:480000
KS ci ratio: 2.519234e-01	ci left: 4.407029e-04	ci right 5.696177e-04	k: 241	n:480000
TYSND1   480000 perm   199 sec   (2412 perm/sec)   p_kst 5.020833e-04   p_cons 8.997792e-01   p_joint 9.916667e-04

Joint ci ratio: 1.769988e-01	ci left: 9.114945e-04	ci right 1.090409e-03	k: 489	n:490000
Cons ci ratio: 1.868519e-03	ci left: 8.989784e-01	ci right 9.006618e-01	k: 440913	n:490000
KS ci ratio: 2.488570e-01	ci left: 4.431856e-04	ci right 5.710044e-04	k: 247	n:490000
TYSND1   490000 perm   205 sec   (2389 perm/sec)   p_kst 5.040816e-04   p_cons 8.998224e-01   p_joint 9.979592e-04

Joint ci ratio: 1.741769e-01	ci left: 9.238588e-04	ci right 1.102005e-03	k: 505	n:500000
Cons ci ratio: 1.849846e-03	ci left: 8.989764e-01	ci right 9.006429e-01	k: 449906	n:500000
KS ci ratio: 2.435136e-01	ci left: 4.549652e-04	ci right 5.829382e-04	k: 258	n:500000
TYSND1   500000 perm   211 sec   (2367 perm/sec)   p_kst 5.160000e-04   p_cons 8.998120e-01   p_joint 1.010000e-03

Joint ci ratio: 1.728165e-01	ci left: 9.207489e-04	ci right 1.096764e-03	k: 513	n:510000
Cons ci ratio: 1.832101e-03	ci left: 8.989372e-01	ci right 9.005876e-01	k: 458880	n:510000
KS ci ratio: 2.416550e-01	ci left: 4.534107e-04	ci right 5.798270e-04	k: 262	n:510000
TYSND1   510000 perm   217 sec   (2346 perm/sec)   p_kst 5.137255e-04   p_cons 8.997647e-01   p_joint 1.005882e-03

Joint ci ratio: 1.716521e-01	ci left: 9.159232e-04	ci right 1.089714e-03	k: 520	n:520000
Cons ci ratio: 1.814334e-03	ci left: 8.989517e-01	ci right 9.005861e-01	k: 467881	n:520000
KS ci ratio: 2.407421e-01	ci left: 4.483049e-04	ci right 5.727549e-04	k: 264	n:520000
TYSND1   520000 perm   224 sec   (2325 perm/sec)   p_kst 5.076923e-04   p_cons 8.997712e-01   p_joint 1.000000e-03

Joint ci ratio: 1.703495e-01	ci left: 9.130899e-04	ci right 1.084893e-03	k: 528	n:530000
Cons ci ratio: 1.797920e-03	ci left: 8.988806e-01	ci right 9.005000e-01	k: 476837	n:530000
KS ci ratio: 2.393913e-01	ci left: 4.451661e-04	ci right 5.679486e-04	k: 267	n:530000
TYSND1   530000 perm   230 sec   (2303 perm/sec)   p_kst 5.037736e-04   p_cons 8.996925e-01   p_joint 9.962264e-04

Joint ci ratio: 1.682937e-01	ci left: 9.192350e-04	ci right 1.089895e-03	k: 541	n:540000
Cons ci ratio: 1.780992e-03	ci left: 8.989087e-01	ci right 9.005129e-01	k: 485845	n:540000
KS ci ratio: 2.376248e-01	ci left: 4.438870e-04	ci right 5.652803e-04	k: 271	n:540000
TYSND1   540000 perm   237 sec   (2282 perm/sec)   p_kst 5.018519e-04   p_cons 8.997130e-01   p_joint 1.001852e-03

Joint ci ratio: 1.658625e-01	ci left: 9.303966e-04	ci right 1.100385e-03	k: 557	n:550000
Cons ci ratio: 1.765085e-03	ci left: 8.988794e-01	ci right 9.004691e-01	k: 494822	n:550000
KS ci ratio: 2.337876e-01	ci left: 4.512139e-04	ci right 5.723303e-04	k: 280	n:550000
TYSND1   550000 perm   243 sec   (2262 perm/sec)   p_kst 5.090909e-04   p_cons 8.996764e-01   p_joint 1.012727e-03

Joint ci ratio: 1.633912e-01	ci left: 9.428893e-04	ci right 1.112341e-03	k: 574	n:560000
Cons ci ratio: 1.749492e-03	ci left: 8.988619e-01	ci right 9.004376e-01	k: 503805	n:560000
KS ci ratio: 2.317351e-01	ci left: 4.515645e-04	ci right 5.715584e-04	k: 285	n:560000
TYSND1   560000 perm   250 sec   (2241 perm/sec)   p_kst 5.089286e-04   p_cons 8.996518e-01   p_joint 1.025000e-03

Joint ci ratio: 1.621275e-01	ci left: 9.414937e-04	ci right 1.109258e-03	k: 583	n:570000
Cons ci ratio: 1.733362e-03	ci left: 8.989436e-01	ci right 9.005049e-01	k: 512844	n:570000
KS ci ratio: 2.293417e-01	ci left: 4.535608e-04	ci right 5.726642e-04	k: 291	n:570000
TYSND1   570000 perm   256 sec   (2222 perm/sec)   p_kst 5.105263e-04   p_cons 8.997263e-01   p_joint 1.022807e-03

Joint ci ratio: 1.676814e-01	ci left: 8.624439e-04	ci right 1.021919e-03	k: 545	n:580000
Cons ci ratio: 1.717504e-03	ci left: 8.990400e-01	ci right 9.005871e-01	k: 521893	n:580000
KS ci ratio: 2.277870e-01	ci left: 4.522424e-04	ci right 5.700815e-04	k: 295	n:580000
TYSND1   580000 perm   263 sec   (2203 perm/sec)   p_kst 5.086207e-04   p_cons 8.998155e-01   p_joint 9.396552e-04

Joint ci ratio: 1.588949e-01	ci left: 9.486231e-04	ci right 1.113966e-03	k: 607	n:590000
Cons ci ratio: 1.702969e-03	ci left: 8.990378e-01	ci right 9.005718e-01	k: 530886	n:590000
KS ci ratio: 2.258872e-01	ci left: 4.525704e-04	ci right 5.693744e-04	k: 300	n:590000
TYSND1   590000 perm   270 sec   (2185 perm/sec)   p_kst 5.084746e-04   p_cons 8.998068e-01   p_joint 1.028814e-03

Joint ci ratio: 1.570961e-01	ci left: 9.552238e-04	ci right 1.119655e-03	k: 621	n:600000
Cons ci ratio: 1.688891e-03	ci left: 8.990258e-01	ci right 9.005470e-01	k: 539873	n:600000
KS ci ratio: 2.236688e-01	ci left: 4.544646e-04	ci right 5.704469e-04	k: 306	n:600000
TYSND1   600000 perm   277 sec   (2165 perm/sec)   p_kst 5.100000e-04   p_cons 8.997883e-01   p_joint 1.035000e-03

Joint ci ratio: 1.552348e-01	ci left: 9.631940e-04	ci right 1.126850e-03	k: 636	n:610000
Cons ci ratio: 1.674333e-03	ci left: 8.991030e-01	ci right 9.006113e-01	k: 548914	n:610000
KS ci ratio: 2.208098e-01	ci left: 4.593992e-04	ci right 5.749387e-04	k: 314	n:610000
TYSND1   610000 perm   284 sec   (2146 perm/sec)   p_kst 5.147541e-04   p_cons 8.998590e-01   p_joint 1.042623e-03

Joint ci ratio: 1.536743e-01	ci left: 9.678161e-04	ci right 1.130452e-03	k: 649	n:620000
Cons ci ratio: 1.660621e-03	ci left: 8.991260e-01	ci right 9.006219e-01	k: 557923	n:620000
KS ci ratio: 2.201127e-01	ci left: 4.550371e-04	ci right 5.690693e-04	k: 316	n:620000
TYSND1   620000 perm   292 sec   (2127 perm/sec)   p_kst 5.096774e-04   p_cons 8.998758e-01   p_joint 1.046774e-03

Joint ci ratio: 1.660222e-01	ci left: 8.107254e-04	ci right 9.590055e-04	k: 556	n:630000
Cons ci ratio: 1.646834e-03	ci left: 8.991929e-01	ci right 9.006765e-01	k: 566960	n:630000
KS ci ratio: 2.173862e-01	ci left: 4.598171e-04	ci right 5.734293e-04	k: 324	n:630000
TYSND1   630000 perm   299 sec   (2108 perm/sec)   p_kst 5.142857e-04   p_cons 8.999365e-01   p_joint 8.825397e-04

Joint ci ratio: 1.512505e-01	ci left: 9.691327e-04	ci right 1.129189e-03	k: 670	n:640000
Cons ci ratio: 1.634475e-03	ci left: 8.991370e-01	ci right 9.006094e-01	k: 575920	n:640000
KS ci ratio: 2.160609e-01	ci left: 4.585432e-04	ci right 5.710583e-04	k: 328	n:640000
TYSND1   640000 perm   306 sec   (2092 perm/sec)   p_kst 5.125000e-04   p_cons 8.998750e-01   p_joint 1.046875e-03

Joint ci ratio: 1.498059e-01	ci left: 9.734698e-04	ci right 1.132569e-03	k: 683	n:650000
Cons ci ratio: 1.622265e-03	ci left: 8.990968e-01	ci right 9.005581e-01	k: 584889	n:650000
KS ci ratio: 2.141171e-01	ci left: 4.602223e-04	ci right 5.720000e-04	k: 334	n:650000
TYSND1   650000 perm   314 sec   (2073 perm/sec)   p_kst 5.138462e-04   p_cons 8.998292e-01   p_joint 1.050769e-03

Joint ci ratio: 1.703663e-01	ci left: 7.332330e-04	ci right 8.712094e-04	k: 528	n:660000
Cons ci ratio: 1.609837e-03	ci left: 8.991126e-01	ci right 9.005627e-01	k: 593894	n:660000
KS ci ratio: 2.125369e-01	ci left: 4.604203e-04	ci right 5.713132e-04	k: 339	n:660000
TYSND1   660000 perm   321 sec   (2055 perm/sec)   p_kst 5.136364e-04   p_cons 8.998394e-01   p_joint 8.000000e-04

Joint ci ratio: 1.530921e-01	ci left: 9.027650e-04	ci right 1.053842e-03	k: 654	n:670000
Cons ci ratio: 1.597625e-03	ci left: 8.991354e-01	ci right 9.005745e-01	k: 602904	n:670000
KS ci ratio: 2.106859e-01	ci left: 4.620290e-04	ci right 5.722152e-04	k: 345	n:670000
TYSND1   670000 perm   329 sec   (2038 perm/sec)   p_kst 5.149254e-04   p_cons 8.998567e-01   p_joint 9.761194e-04

Joint ci ratio: 1.515947e-01	ci left: 9.078781e-04	ci right 1.058190e-03	k: 667	n:680000
Cons ci ratio: 1.585802e-03	ci left: 8.991444e-01	ci right 9.005728e-01	k: 611905	n:680000
KS ci ratio: 2.082913e-01	ci left: 4.663821e-04	ci right 5.761811e-04	k: 353	n:680000
TYSND1   680000 perm   336 sec   (2021 perm/sec)   p_kst 5.191176e-04   p_cons 8.998603e-01   p_joint 9.808824e-04

Joint ci ratio: 1.504726e-01	ci left: 9.086655e-04	ci right 1.057894e-03	k: 677	n:690000
Cons ci ratio: 1.573631e-03	ci left: 8.992229e-01	ci right 9.006404e-01	k: 620954	n:690000
KS ci ratio: 2.068357e-01	ci left: 4.664927e-04	ci right 5.754531e-04	k: 358	n:690000
TYSND1   690000 perm   344 sec   (2004 perm/sec)   p_kst 5.188406e-04   p_cons 8.999333e-01   p_joint 9.811594e-04

Joint ci ratio: 1.522830e-01	ci left: 8.736920e-04	ci right 1.019060e-03	k: 661	n:700000
Cons ci ratio: 1.561921e-03	ci left: 8.992777e-01	ci right 9.006848e-01	k: 629988	n:700000
KS ci ratio: 2.056931e-01	ci left: 4.652477e-04	ci right 5.732414e-04	k: 362	n:700000
TYSND1   700000 perm   352 sec   (1987 perm/sec)   p_kst 5.171429e-04   p_cons 8.999829e-01   p_joint 9.442857e-04

Joint ci ratio: 1.511456e-01	ci left: 8.749363e-04	ci right 1.019326e-03	k: 671	n:710000
Cons ci ratio: 1.551135e-03	ci left: 8.992532e-01	ci right 9.006506e-01	k: 638967	n:710000
KS ci ratio: 2.045693e-01	ci left: 4.640393e-04	ci right 5.710905e-04	k: 366	n:710000
TYSND1   710000 perm   360 sec   (1971 perm/sec)   p_kst 5.154930e-04   p_cons 8.999535e-01   p_joint 9.450704e-04

Joint ci ratio: 1.473543e-01	ci left: 9.095817e-04	ci right 1.055592e-03	k: 706	n:720000
Cons ci ratio: 1.540593e-03	ci left: 8.992267e-01	ci right 9.006145e-01	k: 647944	n:720000
KS ci ratio: 2.037386e-01	ci left: 4.615479e-04	ci right 5.675381e-04	k: 369	n:720000
TYSND1   720000 perm   368 sec   (1955 perm/sec)   p_kst 5.125000e-04   p_cons 8.999222e-01   p_joint 9.805556e-04

Joint ci ratio: 1.464253e-01	ci left: 9.089973e-04	ci right 1.053914e-03	k: 715	n:730000
Cons ci ratio: 1.529972e-03	ci left: 8.992353e-01	ci right 9.006135e-01	k: 656946	n:730000
KS ci ratio: 2.023758e-01	ci left: 4.617264e-04	ci right 5.669607e-04	k: 374	n:730000
TYSND1   730000 perm   376 sec   (1939 perm/sec)   p_kst 5.123288e-04   p_cons 8.999260e-01   p_joint 9.794521e-04

Joint ci ratio: 1.460186e-01	ci left: 9.019209e-04	ci right 1.045275e-03	k: 719	n:740000
Cons ci ratio: 1.519340e-03	ci left: 8.992709e-01	ci right 9.006395e-01	k: 665968	n:740000
KS ci ratio: 2.023765e-01	ci left: 4.554867e-04	ci right 5.592993e-04	k: 374	n:740000
TYSND1   740000 perm   385 sec   (1922 perm/sec)   p_kst 5.054054e-04   p_cons 8.999568e-01   p_joint 9.716216e-04

Joint ci ratio: 1.481988e-01	ci left: 8.629246e-04	ci right 1.002310e-03	k: 698	n:750000
Cons ci ratio: 1.508871e-03	ci left: 8.993121e-01	ci right 9.006714e-01	k: 674995	n:750000
KS ci ratio: 2.015721e-01	ci left: 4.532112e-04	ci right 5.560441e-04	k: 377	n:750000
TYSND1   750000 perm   393 sec   (1907 perm/sec)   p_kst 5.026667e-04   p_cons 8.999933e-01   p_joint 9.306667e-04

Joint ci ratio: 1.474625e-01	ci left: 8.604401e-04	ci right 9.986726e-04	k: 705	n:760000
Cons ci ratio: 1.499085e-03	ci left: 8.992956e-01	ci right 9.006461e-01	k: 683979	n:760000
KS ci ratio: 2.005141e-01	ci left: 4.522461e-04	ci right 5.542555e-04	k: 381	n:760000
TYSND1   760000 perm   402 sec   (1892 perm/sec)   p_kst 5.013158e-04   p_cons 8.999724e-01   p_joint 9.276316e-04

Joint ci ratio: 1.440327e-01	ci left: 8.918124e-04	ci right 1.031466e-03	k: 739	n:770000
Cons ci ratio: 1.489048e-03	ci left: 8.993330e-01	ci right 9.006744e-01	k: 693004	n:770000
KS ci ratio: 1.992146e-01	ci left: 4.525413e-04	ci right 5.538754e-04	k: 386	n:770000
TYSND1   770000 perm   410 sec   (1877 perm/sec)   p_kst 5.012987e-04   p_cons 9.000052e-01   p_joint 9.597403e-04

Joint ci ratio: 1.425943e-01	ci left: 8.989203e-04	ci right 1.038162e-03	k: 754	n:780000
Cons ci ratio: 1.479251e-03	ci left: 8.993643e-01	ci right 9.006969e-01	k: 702025	n:780000
KS ci ratio: 1.976879e-01	ci left: 4.540496e-04	ci right 5.548484e-04	k: 392	n:780000
TYSND1   780000 perm   419 sec   (1862 perm/sec)   p_kst 5.025641e-04   p_cons 9.000321e-01   p_joint 9.666667e-04

Joint ci ratio: 1.422185e-01	ci left: 8.924243e-04	ci right 1.030264e-03	k: 758	n:790000
Cons ci ratio: 1.469945e-03	ci left: 8.993579e-01	ci right 9.006822e-01	k: 711017	n:790000
KS ci ratio: 1.971872e-01	ci left: 4.507086e-04	ci right 5.504818e-04	k: 394	n:790000
TYSND1   790000 perm   427 sec   (1848 perm/sec)   p_kst 4.987342e-04   p_cons 9.000215e-01   p_joint 9.594937e-04

Joint ci ratio: 1.411989e-01	ci left: 8.945315e-04	ci right 1.031623e-03	k: 769	n:800000
Cons ci ratio: 1.461035e-03	ci left: 8.993242e-01	ci right 9.006404e-01	k: 719987	n:800000
KS ci ratio: 1.957063e-01	ci left: 4.522059e-04	ci right 5.514691e-04	k: 400	n:800000
TYSND1   800000 perm   436 sec   (1834 perm/sec)   p_kst 5.000000e-04   p_cons 8.999837e-01   p_joint 9.612500e-04

Joint ci ratio: 1.402908e-01	ci left: 8.953989e-04	ci right 1.031667e-03	k: 779	n:810000
Cons ci ratio: 1.452395e-03	ci left: 8.992778e-01	ci right 9.005860e-01	k: 728946	n:810000
KS ci ratio: 1.940199e-01	ci left: 4.548435e-04	ci right 5.537238e-04	k: 407	n:810000
TYSND1   810000 perm   445 sec   (1820 perm/sec)   p_kst 5.024691e-04   p_cons 8.999333e-01   p_joint 9.617284e-04

Joint ci ratio: 1.392238e-01	ci left: 8.986020e-04	ci right 1.034231e-03	k: 791	n:820000
Cons ci ratio: 1.443730e-03	ci left: 8.992545e-01	ci right 9.005549e-01	k: 737923	n:820000
KS ci ratio: 1.928419e-01	ci left: 4.550990e-04	ci right 5.533636e-04	k: 412	n:820000
TYSND1   820000 perm   454 sec   (1804 perm/sec)   p_kst 5.024390e-04   p_cons 8.999061e-01   p_joint 9.646341e-04

Joint ci ratio: 1.407447e-01	ci left: 8.680099e-04	ci right 1.000573e-03	k: 774	n:830000
Cons ci ratio: 1.435199e-03	ci left: 8.992342e-01	ci right 9.005269e-01	k: 746902	n:830000
KS ci ratio: 1.905482e-01	ci left: 4.610860e-04	ci right 5.593221e-04	k: 422	n:830000
TYSND1   830000 perm   464 sec   (1789 perm/sec)   p_kst 5.084337e-04   p_cons 8.998819e-01   p_joint 9.325301e-04

Joint ci ratio: 1.397563e-01	ci left: 8.703122e-04	ci right 1.002216e-03	k: 785	n:840000
Cons ci ratio: 1.426355e-03	ci left: 8.992729e-01	ci right 9.005577e-01	k: 755930	n:840000
KS ci ratio: 1.885525e-01	ci left: 4.658028e-04	ci right 5.638855e-04	k: 431	n:840000
TYSND1   840000 perm   473 sec   (1774 perm/sec)   p_kst 5.130952e-04   p_cons 8.999167e-01   p_joint 9.345238e-04

Joint ci ratio: 1.386144e-01	ci left: 8.748350e-04	ci right 1.006251e-03	k: 798	n:850000
Cons ci ratio: 1.418321e-03	ci left: 8.992281e-01	ci right 9.005056e-01	k: 764888	n:850000
KS ci ratio: 1.876857e-01	ci left: 4.648071e-04	ci right 5.621788e-04	k: 435	n:850000
TYSND1   850000 perm   483 sec   (1760 perm/sec)   p_kst 5.117647e-04   p_cons 8.998682e-01   p_joint 9.388235e-04

Joint ci ratio: 1.378402e-01	ci left: 8.747657e-04	ci right 1.005378e-03	k: 807	n:860000
Cons ci ratio: 1.409693e-03	ci left: 8.992777e-01	ci right 9.005475e-01	k: 773926	n:860000
KS ci ratio: 1.866187e-01	ci left: 4.649439e-04	ci right 5.617278e-04	k: 440	n:860000
TYSND1   860000 perm   493 sec   (1746 perm/sec)   p_kst 5.116279e-04   p_cons 8.999140e-01   p_joint 9.383721e-04

Joint ci ratio: 1.368277e-01	ci left: 8.780302e-04	ci right 1.008088e-03	k: 819	n:870000
Cons ci ratio: 1.401283e-03	ci left: 8.993181e-01	ci right 9.005803e-01	k: 782957	n:870000
KS ci ratio: 1.853619e-01	ci left: 4.661752e-04	ci right 5.624885e-04	k: 446	n:870000
TYSND1   870000 perm   502 sec   (1733 perm/sec)   p_kst 5.126437e-04   p_cons 8.999506e-01   p_joint 9.413793e-04

Joint ci ratio: 1.365786e-01	ci left: 8.713449e-04	ci right 1.000158e-03	k: 822	n:880000
Cons ci ratio: 1.393637e-03	ci left: 8.992779e-01	ci right 9.005331e-01	k: 791918	n:880000
KS ci ratio: 1.849489e-01	ci left: 4.630451e-04	ci right 5.584746e-04	k: 448	n:880000
TYSND1   880000 perm   512 sec   (1720 perm/sec)   p_kst 5.090909e-04   p_cons 8.999068e-01   p_joint 9.340909e-04

Joint ci ratio: 1.333736e-01	ci left: 9.049819e-04	ci right 1.035380e-03	k: 862	n:890000
Cons ci ratio: 1.385604e-03	ci left: 8.993050e-01	ci right 9.005531e-01	k: 800938	n:890000
KS ci ratio: 1.841307e-01	ci left: 4.621291e-04	ci right 5.569014e-04	k: 452	n:890000
TYSND1   890000 perm   521 sec   (1708 perm/sec)   p_kst 5.078652e-04   p_cons 8.999303e-01   p_joint 9.685393e-04

Joint ci ratio: 1.323044e-01	ci left: 9.099653e-04	ci right 1.039948e-03	k: 876	n:900000
Cons ci ratio: 1.377930e-03	ci left: 8.993026e-01	ci right 9.005437e-01	k: 809932	n:900000
KS ci ratio: 1.819344e-01	ci left: 4.686567e-04	ci right 5.634950e-04	k: 463	n:900000
TYSND1   900000 perm   531 sec   (1695 perm/sec)   p_kst 5.144444e-04   p_cons 8.999244e-01   p_joint 9.733333e-04

Joint ci ratio: 1.319292e-01	ci left: 9.052784e-04	ci right 1.034196e-03	k: 881	n:910000
Cons ci ratio: 1.369546e-03	ci left: 8.994104e-01	ci right 9.006441e-01	k: 819026	n:910000
KS ci ratio: 1.811554e-01	ci left: 4.677025e-04	ci right 5.618979e-04	k: 467	n:910000
TYSND1   910000 perm   541 sec   (1683 perm/sec)   p_kst 5.131868e-04   p_cons 9.000286e-01   p_joint 9.681319e-04

Joint ci ratio: 1.306754e-01	ci left: 9.133100e-04	ci right 1.042039e-03	k: 898	n:920000
Cons ci ratio: 1.361517e-03	ci left: 8.994887e-01	ci right 9.007153e-01	k: 828095	n:920000
KS ci ratio: 1.794378e-01	ci left: 4.719599e-04	ci right 5.660138e-04	k: 476	n:920000
TYSND1   920000 perm   550 sec   (1671 perm/sec)   p_kst 5.173913e-04   p_cons 9.001033e-01   p_joint 9.760870e-04

Joint ci ratio: 1.293859e-01	ci left: 9.222150e-04	ci right 1.050818e-03	k: 916	n:930000
Cons ci ratio: 1.354080e-03	ci left: 8.995049e-01	ci right 9.007248e-01	k: 837108	n:930000
KS ci ratio: 1.772218e-01	ci left: 4.792126e-04	ci right 5.734060e-04	k: 488	n:930000
TYSND1   930000 perm   560 sec   (1661 perm/sec)   p_kst 5.247312e-04   p_cons 9.001161e-01   p_joint 9.849462e-04

Joint ci ratio: 1.285474e-01	ci left: 9.247584e-04	ci right 1.052817e-03	k: 928	n:940000
Cons ci ratio: 1.346605e-03	ci left: 8.995422e-01	ci right 9.007554e-01	k: 846141	n:940000
KS ci ratio: 1.759667e-01	ci left: 4.812323e-04	ci right 5.750816e-04	k: 495	n:940000
TYSND1   940000 perm   570 sec   (1648 perm/sec)   p_kst 5.265957e-04   p_cons 9.001500e-01   p_joint 9.872340e-04

Joint ci ratio: 1.276571e-01	ci left: 9.282699e-04	ci right 1.055857e-03	k: 941	n:950000
Cons ci ratio: 1.339612e-03	ci left: 8.995301e-01	ci right 9.007369e-01	k: 855128	n:950000
KS ci ratio: 1.749118e-01	ci left: 4.822051e-04	ci right 5.756209e-04	k: 501	n:950000
TYSND1   950000 perm   581 sec   (1636 perm/sec)   p_kst 5.273684e-04   p_cons 9.001347e-01   p_joint 9.905263e-04

Joint ci ratio: 1.268515e-01	ci left: 9.307026e-04	ci right 1.057756e-03	k: 953	n:960000
Cons ci ratio: 1.332357e-03	ci left: 8.995684e-01	ci right 9.007688e-01	k: 864163	n:960000
KS ci ratio: 1.735343e-01	ci left: 4.851522e-04	ci right 5.783211e-04	k: 509	n:960000
TYSND1   960000 perm   591 sec   (1625 perm/sec)   p_kst 5.302083e-04   p_cons 9.001698e-01   p_joint 9.927083e-04

Joint ci ratio: 1.263889e-01	ci left: 9.280955e-04	ci right 1.054296e-03	k: 960	n:970000
Cons ci ratio: 1.325074e-03	ci left: 8.996256e-01	ci right 9.008194e-01	k: 873217	n:970000
KS ci ratio: 1.731953e-01	ci left: 4.821229e-04	ci right 5.745104e-04	k: 511	n:970000
TYSND1   970000 perm   601 sec   (1613 perm/sec)   p_kst 5.268041e-04   p_cons 9.002237e-01   p_joint 9.896907e-04

Joint ci ratio: 1.254779e-01	ci left: 9.324610e-04	ci right 1.058273e-03	k: 974	n:980000
Cons ci ratio: 1.318500e-03	ci left: 8.996008e-01	ci right 9.007887e-01	k: 882192	n:980000
KS ci ratio: 1.720232e-01	ci left: 4.840376e-04	ci right 5.760991e-04	k: 518	n:980000
TYSND1   980000 perm   612 sec   (1602 perm/sec)   p_kst 5.285714e-04   p_cons 9.001959e-01   p_joint 9.938776e-04

Joint ci ratio: 1.247760e-01	ci left: 9.338055e-04	ci right 1.059043e-03	k: 985	n:990000
Cons ci ratio: 1.311713e-03	ci left: 8.996190e-01	ci right 9.008008e-01	k: 891209	n:990000
KS ci ratio: 1.708746e-01	ci left: 4.859157e-04	ci right 5.776537e-04	k: 525	n:990000
TYSND1   990000 perm   623 sec   (1590 perm/sec)   p_kst 5.303030e-04   p_cons 9.002111e-01   p_joint 9.949495e-04

Joint ci ratio: 1.238992e-01	ci left: 9.380322e-04	ci right 1.062887e-03	k: 999	n:1000000
Cons ci ratio: 1.305451e-03	ci left: 8.995788e-01	ci right 9.007549e-01	k: 900168	n:1000000
KS ci ratio: 1.692727e-01	ci left: 4.906310e-04	ci right 5.823023e-04	k: 535	n:1000000
TYSND1   1000000 perm   633 sec   (1579 perm/sec)   p_kst 5.350000e-04   p_cons 9.001680e-01   p_joint 9.990000e-04

Joint ci ratio: 1.229800e-01	ci left: 9.431378e-04	ci right 1.067673e-03	k: 1014	n:1010000
Cons ci ratio: 1.299027e-03	ci left: 8.995741e-01	ci right 9.007444e-01	k: 909162	n:1010000
KS ci ratio: 1.680233e-01	ci left: 4.933598e-04	ci right 5.847916e-04	k: 543	n:1010000
TYSND1   1010000 perm   644 sec   (1569 perm/sec)   p_kst 5.376238e-04   p_cons 9.001604e-01   p_joint 1.003960e-03

Joint ci ratio: 1.223189e-01	ci left: 9.443448e-04	ci right 1.068321e-03	k: 1025	n:1020000
Cons ci ratio: 1.292887e-03	ci left: 8.995430e-01	ci right 9.007077e-01	k: 918129	n:1020000
KS ci ratio: 1.672564e-01	ci left: 4.932192e-04	ci right 5.841658e-04	k: 548	n:1020000
TYSND1   1020000 perm   654 sec   (1560 perm/sec)   p_kst 5.372549e-04   p_cons 9.001265e-01   p_joint 1.004902e-03

Joint ci ratio: 1.218449e-01	ci left: 9.427062e-04	ci right 1.065953e-03	k: 1033	n:1030000
Cons ci ratio: 1.286146e-03	ci left: 8.996088e-01	ci right 9.007676e-01	k: 927195	n:1030000
KS ci ratio: 1.665000e-01	ci left: 4.930823e-04	ci right 5.835512e-04	k: 553	n:1030000
TYSND1   1030000 perm   665 sec   (1549 perm/sec)   p_kst 5.368932e-04   p_cons 9.001893e-01   p_joint 1.002913e-03

Joint ci ratio: 1.206828e-01	ci left: 9.522894e-04	ci right 1.075517e-03	k: 1053	n:1040000
Cons ci ratio: 1.279858e-03	ci left: 8.996243e-01	ci right 9.007773e-01	k: 936210	n:1040000
KS ci ratio: 1.647250e-01	ci left: 4.994015e-04	ci right 5.899563e-04	k: 565	n:1040000
TYSND1   1040000 perm   676 sec   (1539 perm/sec)   p_kst 5.432692e-04   p_cons 9.002019e-01   p_joint 1.012500e-03

Joint ci ratio: 1.198890e-01	ci left: 9.561523e-04	ci right 1.079008e-03	k: 1067	n:1050000
Cons ci ratio: 1.273499e-03	ci left: 8.996623e-01	ci right 9.008097e-01	k: 945249	n:1050000
KS ci ratio: 1.637156e-01	ci left: 5.010381e-04	ci right 5.912780e-04	k: 572	n:1050000
TYSND1   1050000 perm   687 sec   (1529 perm/sec)   p_kst 5.447619e-04   p_cons 9.002371e-01   p_joint 1.016190e-03

Joint ci ratio: 1.193871e-01	ci left: 9.553684e-04	ci right 1.077573e-03	k: 1076	n:1060000
Cons ci ratio: 1.267580e-03	ci left: 8.996505e-01	ci right 9.007926e-01	k: 954236	n:1060000
KS ci ratio: 1.631472e-01	ci left: 4.999305e-04	ci right 5.896277e-04	k: 576	n:1060000
TYSND1   1060000 perm   698 sec   (1519 perm/sec)   p_kst 5.433962e-04   p_cons 9.002226e-01   p_joint 1.015094e-03

Joint ci ratio: 1.187274e-01	ci left: 9.573208e-04	ci right 1.079051e-03	k: 1088	n:1070000
Cons ci ratio: 1.261841e-03	ci left: 8.996249e-01	ci right 9.007617e-01	k: 963208	n:1070000
KS ci ratio: 1.620277e-01	ci left: 5.024307e-04	ci right 5.918977e-04	k: 584	n:1070000
TYSND1   1070000 perm   709 sec   (1510 perm/sec)   p_kst 5.457944e-04   p_cons 9.001944e-01   p_joint 1.016822e-03

Joint ci ratio: 1.186189e-01	ci left: 9.502534e-04	ci right 1.070967e-03	k: 1090	n:1080000
Cons ci ratio: 1.255966e-03	ci left: 8.996304e-01	ci right 9.007619e-01	k: 972213	n:1080000
KS ci ratio: 1.620281e-01	ci left: 4.977785e-04	ci right 5.864173e-04	k: 584	n:1080000
TYSND1   1080000 perm   720 sec   (1501 perm/sec)   p_kst 5.407407e-04   p_cons 9.001972e-01   p_joint 1.009259e-03

Joint ci ratio: 1.180790e-01	ci left: 9.504382e-04	ci right 1.070587e-03	k: 1100	n:1090000
Cons ci ratio: 1.250198e-03	ci left: 8.996321e-01	ci right 9.007584e-01	k: 981214	n:1090000
KS ci ratio: 1.613401e-01	ci left: 4.976133e-04	ci right 5.858099e-04	k: 589	n:1090000
TYSND1   1090000 perm   731 sec   (1491 perm/sec)   p_kst 5.403670e-04   p_cons 9.001963e-01   p_joint 1.009174e-03

Joint ci ratio: 1.173879e-01	ci left: 9.532680e-04	ci right 1.073021e-03	k: 1113	n:1100000
Cons ci ratio: 1.244791e-03	ci left: 8.995928e-01	ci right 9.007142e-01	k: 990170	n:1100000
KS ci ratio: 1.602571e-01	ci left: 5.000697e-04	ci right 5.880494e-04	k: 597	n:1100000
TYSND1   1100000 perm   742 sec   (1482 perm/sec)   p_kst 5.427273e-04   p_cons 9.001545e-01   p_joint 1.011818e-03

Joint ci ratio: 1.170210e-01	ci left: 9.508014e-04	ci right 1.069845e-03	k: 1120	n:1110000
Cons ci ratio: 1.239286e-03	ci left: 8.995786e-01	ci right 9.006950e-01	k: 999153	n:1110000
KS ci ratio: 1.595913e-01	ci left: 4.998888e-04	ci right 5.874363e-04	k: 602	n:1110000
TYSND1   1110000 perm   754 sec   (1473 perm/sec)   p_kst 5.423423e-04   p_cons 9.001378e-01   p_joint 1.009009e-03

Joint ci ratio: 1.167093e-01	ci left: 9.475125e-04	ci right 1.065807e-03	k: 1126	n:1120000
Cons ci ratio: 1.234001e-03	ci left: 8.995432e-01	ci right 9.006548e-01	k: 1008112	n:1120000
KS ci ratio: 1.590647e-01	ci left: 4.988545e-04	ci right 5.859051e-04	k: 606	n:1120000
TYSND1   1120000 perm   765 sec   (1464 perm/sec)   p_kst 5.410714e-04   p_cons 9.001000e-01   p_joint 1.005357e-03

Joint ci ratio: 1.164000e-01	ci left: 9.442823e-04	ci right 1.061839e-03	k: 1132	n:1130000
Cons ci ratio: 1.228855e-03	ci left: 8.994977e-01	ci right 9.006046e-01	k: 1017059	n:1130000
KS ci ratio: 1.584136e-01	ci left: 4.986888e-04	ci right 5.853205e-04	k: 611	n:1130000
TYSND1   1130000 perm   777 sec   (1454 perm/sec)   p_kst 5.407080e-04   p_cons 9.000522e-01   p_joint 1.001770e-03

Joint ci ratio: 8.536080e-02	ci left: 1.767655e-03	ci right 1.926122e-03	k: 2104	n:1140000
Cons ci ratio: 1.153621e-03	ci left: 9.096139e-01	ci right 9.106647e-01	k: 1037560	n:1140000
KS ci ratio: 1.570085e-01	ci left: 5.035828e-04	ci right 5.902156e-04	k: 622	n:1140000
TYSND1   1140000 perm   789 sec   (1445 perm/sec)   p_kst 5.456140e-04   p_cons 9.101404e-01   p_joint 1.845614e-03

Joint ci ratio: 1.308339e-01	ci left: 7.289612e-04	ci right 8.318408e-04	k: 896	n:1150000
Cons ci ratio: 1.148768e-03	ci left: 9.095914e-01	ci right 9.106378e-01	k: 1046633	n:1150000
KS ci ratio: 1.561337e-01	ci left: 5.050523e-04	ci right 5.914085e-04	k: 629	n:1150000
TYSND1   1150000 perm   801 sec   (1436 perm/sec)   p_kst 5.469565e-04   p_cons 9.101157e-01   p_joint 7.791304e-04

Joint ci ratio: 1.305434e-01	ci left: 7.260125e-04	ci right 8.282308e-04	k: 900	n:1160000
Cons ci ratio: 1.143728e-03	ci left: 9.096048e-01	ci right 9.106466e-01	k: 1055747	n:1160000
KS ci ratio: 1.556405e-01	ci left: 5.040122e-04	ci right 5.898929e-04	k: 633	n:1160000
TYSND1   1160000 perm   813 sec   (1427 perm/sec)   p_kst 5.456897e-04   p_cons 9.101267e-01   p_joint 7.758621e-04

Joint ci ratio: 1.293990e-01	ci left: 7.330380e-04	ci right 8.352713e-04	k: 916	n:1170000
Cons ci ratio: 1.138421e-03	ci left: 9.096660e-01	ci right 9.107030e-01	k: 1064917	n:1170000
KS ci ratio: 1.543072e-01	ci left: 5.087416e-04	ci right 5.946169e-04	k: 644	n:1170000
TYSND1   1170000 perm   825 sec   (1418 perm/sec)   p_kst 5.504274e-04   p_cons 9.101855e-01   p_joint 7.829060e-04

Joint ci ratio: 1.284911e-01	ci left: 7.374875e-04	ci right 8.395647e-04	k: 929	n:1180000
Cons ci ratio: 1.133374e-03	ci left: 9.096989e-01	ci right 9.107313e-01	k: 1074055	n:1180000
KS ci ratio: 1.530077e-01	ci left: 5.133939e-04	ci right 5.992579e-04	k: 655	n:1180000
TYSND1   1180000 perm   838 sec   (1409 perm/sec)   p_kst 5.550847e-04   p_cons 9.102161e-01   p_joint 7.872881e-04

Joint ci ratio: 1.279420e-01	ci left: 7.377972e-04	ci right 8.394478e-04	k: 937	n:1190000
Cons ci ratio: 1.128574e-03	ci left: 9.097051e-01	ci right 9.107332e-01	k: 1083162	n:1190000
KS ci ratio: 1.524279e-01	ci left: 5.131208e-04	ci right 5.985842e-04	k: 660	n:1190000
TYSND1   1190000 perm   850 sec   (1400 perm/sec)   p_kst 5.546218e-04   p_cons 9.102202e-01   p_joint 7.873950e-04

Joint ci ratio: 1.271312e-01	ci left: 7.413300e-04	ci right 8.427711e-04	k: 949	n:1200000
Cons ci ratio: 1.123582e-03	ci left: 9.097481e-01	ci right 9.107716e-01	k: 1092313	n:1200000
KS ci ratio: 1.515136e-01	ci left: 5.152580e-04	ci right 6.005159e-04	k: 668	n:1200000
TYSND1   1200000 perm   862 sec   (1392 perm/sec)   p_kst 5.566667e-04   p_cons 9.102608e-01   p_joint 7.908333e-04

Joint ci ratio: 1.267317e-01	ci left: 7.400045e-04	ci right 8.409222e-04	k: 955	n:1210000
Cons ci ratio: 1.118956e-03	ci left: 9.097464e-01	ci right 9.107657e-01	k: 1101411	n:1210000
KS ci ratio: 1.509506e-01	ci left: 5.149755e-04	ci right 5.998415e-04	k: 673	n:1210000
TYSND1   1210000 perm   874 sec   (1384 perm/sec)   p_kst 5.561983e-04   p_cons 9.102570e-01   p_joint 7.892562e-04

Joint ci ratio: 1.261393e-01	ci left: 7.410826e-04	ci right 8.416396e-04	k: 964	n:1220000
Cons ci ratio: 1.114570e-03	ci left: 9.097176e-01	ci right 9.107329e-01	k: 1110476	n:1220000
KS ci ratio: 1.499526e-01	ci left: 5.178538e-04	ci right 6.025792e-04	k: 682	n:1220000
TYSND1   1220000 perm   887 sec   (1376 perm/sec)   p_kst 5.590164e-04   p_cons 9.102262e-01   p_joint 7.901639e-04

Joint ci ratio: 1.256843e-01	ci left: 7.405694e-04	ci right 8.406672e-04	k: 971	n:1230000
Cons ci ratio: 1.109717e-03	ci left: 9.097659e-01	ci right 9.107769e-01	k: 1119635	n:1230000
KS ci ratio: 1.491899e-01	ci left: 5.191217e-04	ci right 6.035841e-04	k: 689	n:1230000
TYSND1   1230000 perm   899 sec   (1368 perm/sec)   p_kst 5.601626e-04   p_cons 9.102724e-01   p_joint 7.894309e-04

Joint ci ratio: 1.253624e-01	ci left: 7.385026e-04	ci right 8.380465e-04	k: 976	n:1240000
Cons ci ratio: 1.105013e-03	ci left: 9.098005e-01	ci right 9.108072e-01	k: 1128778	n:1240000
KS ci ratio: 1.486523e-01	ci left: 5.188173e-04	ci right 6.028989e-04	k: 694	n:1240000
TYSND1   1240000 perm   912 sec   (1360 perm/sec)   p_kst 5.596774e-04   p_cons 9.103048e-01   p_joint 7.870968e-04

Joint ci ratio: 1.249794e-01	ci left: 7.372443e-04	ci right 8.362924e-04	k: 982	n:1250000
Cons ci ratio: 1.100687e-03	ci left: 9.097873e-01	ci right 9.107900e-01	k: 1137862	n:1250000
KS ci ratio: 1.482265e-01	ci left: 5.177479e-04	ci right 6.013945e-04	k: 698	n:1250000
TYSND1   1250000 perm   925 sec   (1352 perm/sec)   p_kst 5.584000e-04   p_cons 9.102896e-01   p_joint 7.856000e-04

Joint ci ratio: 1.242857e-01	ci left: 7.398512e-04	ci right 8.386573e-04	k: 993	n:1260000
Cons ci ratio: 1.096166e-03	ci left: 9.098109e-01	ci right 9.108095e-01	k: 1146992	n:1260000
KS ci ratio: 1.476992e-01	ci left: 5.174601e-04	ci right 6.007366e-04	k: 703	n:1260000
TYSND1   1260000 perm   938 sec   (1343 perm/sec)   p_kst 5.579365e-04   p_cons 9.103111e-01   p_joint 7.880952e-04

Joint ci ratio: 1.234807e-01	ci left: 7.439447e-04	ci right 8.426068e-04	k: 1006	n:1270000
Cons ci ratio: 1.091895e-03	ci left: 9.098049e-01	ci right 9.107996e-01	k: 1156085	n:1270000
KS ci ratio: 1.470738e-01	ci left: 5.179358e-04	ci right 6.009049e-04	k: 709	n:1270000
TYSND1   1270000 perm   951 sec   (1336 perm/sec)   p_kst 5.582677e-04   p_cons 9.103031e-01   p_joint 7.921260e-04

Joint ci ratio: 1.230537e-01	ci left: 7.434327e-04	ci right 8.416613e-04	k: 1013	n:1280000
Cons ci ratio: 1.087643e-03	ci left: 9.098037e-01	ci right 9.107945e-01	k: 1165184	n:1280000
KS ci ratio: 1.465587e-01	ci left: 5.176522e-04	ci right 6.002600e-04	k: 714	n:1280000
TYSND1   1280000 perm   964 sec   (1328 perm/sec)   p_kst 5.578125e-04   p_cons 9.103000e-01   p_joint 7.914063e-04

Joint ci ratio: 1.226312e-01	ci left: 7.429293e-04	ci right 8.407298e-04	k: 1020	n:1290000
Cons ci ratio: 1.083444e-03	ci left: 9.098017e-01	ci right 9.107887e-01	k: 1174282	n:1290000
KS ci ratio: 1.464566e-01	ci left: 5.143861e-04	ci right 5.964104e-04	k: 715	n:1290000
TYSND1   1290000 perm   977 sec   (1321 perm/sec)   p_kst 5.542636e-04   p_cons 9.102961e-01   p_joint 7.906977e-04

Joint ci ratio: 1.222726e-01	ci left: 7.416884e-04	ci right 8.390194e-04	k: 1026	n:1300000
Cons ci ratio: 1.079422e-03	ci left: 9.097805e-01	ci right 9.107638e-01	k: 1183355	n:1300000
KS ci ratio: 1.460493e-01	ci left: 5.133936e-04	ci right 5.950121e-04	k: 719	n:1300000
TYSND1   1300000 perm   990 sec   (1313 perm/sec)   p_kst 5.530769e-04   p_cons 9.102731e-01   p_joint 7.892308e-04

Joint ci ratio: 1.216815e-01	ci left: 7.434274e-04	ci right 8.404810e-04	k: 1036	n:1310000
Cons ci ratio: 1.075157e-03	ci left: 9.098033e-01	ci right 9.107827e-01	k: 1192485	n:1310000
KS ci ratio: 1.456453e-01	ci left: 5.124165e-04	ci right 5.936349e-04	k: 723	n:1310000
TYSND1   1310000 perm   1003 sec   (1305 perm/sec)   p_kst 5.519084e-04   p_cons 9.102939e-01   p_joint 7.908397e-04

Joint ci ratio: 1.210411e-01	ci left: 7.458758e-04	ci right 8.426998e-04	k: 1047	n:1320000
Cons ci ratio: 1.071190e-03	ci left: 9.097877e-01	ci right 9.107635e-01	k: 1201565	n:1320000
KS ci ratio: 1.448471e-01	ci left: 5.143750e-04	ci right 5.954183e-04	k: 731	n:1320000
TYSND1   1320000 perm   1017 sec   (1298 perm/sec)   p_kst 5.537879e-04   p_cons 9.102765e-01   p_joint 7.931818e-04

Joint ci ratio: 1.203538e-01	ci left: 7.490179e-04	ci right 8.456585e-04	k: 1059	n:1330000
Cons ci ratio: 1.067110e-03	ci left: 9.097965e-01	ci right 9.107686e-01	k: 1210677	n:1330000
KS ci ratio: 1.440619e-01	ci left: 5.163052e-04	ci right 5.971737e-04	k: 739	n:1330000
TYSND1   1330000 perm   1030 sec   (1291 perm/sec)   p_kst 5.556391e-04   p_cons 9.102835e-01   p_joint 7.962406e-04

Joint ci ratio: 1.305502e-01	ci left: 6.284864e-04	ci right 7.169785e-04	k: 900	n:1340000
Cons ci ratio: 1.063149e-03	ci left: 9.097940e-01	ci right 9.107625e-01	k: 1219774	n:1340000
KS ci ratio: 1.431936e-01	ci left: 5.189273e-04	ci right 5.996747e-04	k: 748	n:1340000
TYSND1   1340000 perm   1044 sec   (1284 perm/sec)   p_kst 5.582090e-04   p_cons 9.102791e-01   p_joint 6.716418e-04

Joint ci ratio: 1.300460e-01	ci left: 6.288471e-04	ci right 7.170216e-04	k: 907	n:1350000
Cons ci ratio: 1.059314e-03	ci left: 9.097789e-01	ci right 9.107438e-01	k: 1228854	n:1350000
KS ci ratio: 1.425290e-01	ci left: 5.200832e-04	ci right 6.006031e-04	k: 755	n:1350000
TYSND1   1350000 perm   1057 sec   (1277 perm/sec)   p_kst 5.592593e-04   p_cons 9.102622e-01   p_joint 6.718519e-04

Joint ci ratio: 1.294768e-01	ci left: 6.299147e-04	ci right 7.178226e-04	k: 915	n:1360000
Cons ci ratio: 1.055311e-03	ci left: 9.097964e-01	ci right 9.107577e-01	k: 1237978	n:1360000
KS ci ratio: 1.417807e-01	ci left: 5.219323e-04	ci right 6.022783e-04	k: 763	n:1360000
TYSND1   1360000 perm   1071 sec   (1270 perm/sec)   p_kst 5.610294e-04   p_cons 9.102779e-01   p_joint 6.727941e-04

Joint ci ratio: 1.290548e-01	ci left: 6.295547e-04	ci right 7.171041e-04	k: 921	n:1370000
Cons ci ratio: 1.051282e-03	ci left: 9.098247e-01	ci right 9.107824e-01	k: 1247117	n:1370000
KS ci ratio: 1.413191e-01	ci left: 5.216429e-04	ci right 6.016609e-04	k: 768	n:1370000
TYSND1   1370000 perm   1084 sec   (1263 perm/sec)   p_kst 5.605839e-04   p_cons 9.103044e-01   p_joint 6.722628e-04

Joint ci ratio: 1.286370e-01	ci left: 6.292004e-04	ci right 7.163956e-04	k: 927	n:1380000
Cons ci ratio: 1.047620e-03	ci left: 9.098024e-01	ci right 9.107567e-01	k: 1256187	n:1380000
KS ci ratio: 1.409531e-01	ci left: 5.206591e-04	ci right 6.003019e-04	k: 772	n:1380000
TYSND1   1380000 perm   1098 sec   (1256 perm/sec)   p_kst 5.594203e-04   p_cons 9.102804e-01   p_joint 6.717391e-04

Joint ci ratio: 1.280860e-01	ci left: 6.302444e-04	ci right 7.171817e-04	k: 935	n:1390000
Cons ci ratio: 1.043765e-03	ci left: 9.098165e-01	ci right 9.107674e-01	k: 1265307	n:1390000
KS ci ratio: 1.404994e-01	ci left: 5.203838e-04	ci right 5.997068e-04	k: 777	n:1390000
TYSND1   1390000 perm   1112 sec   (1250 perm/sec)   p_kst 5.589928e-04   p_cons 9.102928e-01   p_joint 6.726619e-04

Joint ci ratio: 1.277453e-01	ci left: 6.291997e-04	ci right 7.157447e-04	k: 940	n:1400000
Cons ci ratio: 1.040131e-03	ci left: 9.098025e-01	ci right 9.107500e-01	k: 1274388	n:1400000
KS ci ratio: 1.400501e-01	ci left: 5.201129e-04	ci right 5.991199e-04	k: 782	n:1400000
TYSND1   1400000 perm   1126 sec   (1243 perm/sec)   p_kst 5.585714e-04   p_cons 9.102771e-01   p_joint 6.714286e-04

Joint ci ratio: 1.276100e-01	ci left: 6.261104e-04	ci right 7.121323e-04	k: 942	n:1410000
Cons ci ratio: 1.036367e-03	ci left: 9.098151e-01	ci right 9.107591e-01	k: 1283506	n:1410000
KS ci ratio: 1.399610e-01	ci left: 5.171084e-04	ci right 5.956050e-04	k: 783	n:1410000
TYSND1   1410000 perm   1140 sec   (1236 perm/sec)   p_kst 5.553191e-04   p_cons 9.102879e-01   p_joint 6.680851e-04

Joint ci ratio: 1.271390e-01	ci left: 6.264737e-04	ci right 7.122038e-04	k: 949	n:1420000
Cons ci ratio: 1.032649e-03	ci left: 9.098267e-01	ci right 9.107674e-01	k: 1292623	n:1420000
KS ci ratio: 1.395169e-01	ci left: 5.168649e-04	ci right 5.950547e-04	k: 788	n:1420000
TYSND1   1420000 perm   1154 sec   (1230 perm/sec)   p_kst 5.549296e-04   p_cons 9.102979e-01   p_joint 6.683099e-04

Joint ci ratio: 1.268723e-01	ci left: 6.248010e-04	ci right 7.101095e-04	k: 953	n:1430000
Cons ci ratio: 1.029036e-03	ci left: 9.098277e-01	ci right 9.107651e-01	k: 1301725	n:1430000
KS ci ratio: 1.392525e-01	ci left: 5.152751e-04	ci right 5.930645e-04	k: 791	n:1430000
TYSND1   1430000 perm   1168 sec   (1224 perm/sec)   p_kst 5.531469e-04   p_cons 9.102972e-01   p_joint 6.664336e-04

Joint ci ratio: 1.263436e-01	ci left: 6.258418e-04	ci right 7.109095e-04	k: 961	n:1440000
Cons ci ratio: 1.025583e-03	ci left: 9.098091e-01	ci right 9.107434e-01	k: 1310799	n:1440000
KS ci ratio: 1.387280e-01	ci left: 5.157186e-04	ci right 5.932575e-04	k: 797	n:1440000
TYSND1   1440000 perm   1183 sec   (1218 perm/sec)   p_kst 5.534722e-04   p_cons 9.102771e-01   p_joint 6.673611e-04

Joint ci ratio: 1.257566e-01	ci left: 6.275368e-04	ci right 7.124092e-04	k: 970	n:1450000
Cons ci ratio: 1.022151e-03	ci left: 9.097929e-01	ci right 9.107240e-01	k: 1319876	n:1450000
KS ci ratio: 1.380377e-01	ci left: 5.174882e-04	ci right 5.948742e-04	k: 805	n:1450000
TYSND1   1450000 perm   1197 sec   (1211 perm/sec)   p_kst 5.551724e-04   p_cons 9.102593e-01   p_joint 6.689655e-04

Joint ci ratio: 1.252417e-01	ci left: 6.285461e-04	ci right 7.131810e-04	k: 978	n:1460000
Cons ci ratio: 1.018716e-03	ci left: 9.097832e-01	ci right 9.107111e-01	k: 1328962	n:1460000
KS ci ratio: 1.376115e-01	ci left: 5.172503e-04	ci right 5.943424e-04	k: 810	n:1460000
TYSND1   1460000 perm   1212 sec   (1205 perm/sec)   p_kst 5.547945e-04   p_cons 9.102479e-01   p_joint 6.698630e-04

Joint ci ratio: 1.247330e-01	ci left: 6.295423e-04	ci right 7.139417e-04	k: 986	n:1470000
Cons ci ratio: 1.015353e-03	ci left: 9.097674e-01	ci right 9.106922e-01	k: 1338039	n:1470000
KS ci ratio: 1.370214e-01	ci left: 5.183300e-04	ci right 5.952246e-04	k: 817	n:1470000
TYSND1   1470000 perm   1226 sec   (1199 perm/sec)   p_kst 5.557823e-04   p_cons 9.102306e-01   p_joint 6.707483e-04

Joint ci ratio: 1.243557e-01	ci left: 6.292164e-04	ci right 7.132980e-04	k: 992	n:1480000
Cons ci ratio: 1.011805e-03	ci left: 9.097870e-01	ci right 9.107087e-01	k: 1347168	n:1480000
KS ci ratio: 1.366046e-01	ci left: 5.180905e-04	ci right 5.946967e-04	k: 822	n:1480000
TYSND1   1480000 perm   1241 sec   (1193 perm/sec)   p_kst 5.554054e-04   p_cons 9.102486e-01   p_joint 6.702703e-04

Joint ci ratio: 1.138293e-01	ci left: 7.500239e-04	ci right 8.411962e-04	k: 1184	n:1490000
Cons ci ratio: 1.008327e-03	ci left: 9.098010e-01	ci right 9.107195e-01	k: 1356289	n:1490000
KS ci ratio: 1.361093e-01	ci left: 5.185028e-04	ci right 5.948696e-04	k: 828	n:1490000
TYSND1   1490000 perm   1256 sec   (1186 perm/sec)   p_kst 5.557047e-04   p_cons 9.102611e-01   p_joint 7.946309e-04

Joint ci ratio: 1.133519e-01	ci left: 7.515011e-04	ci right 8.424442e-04	k: 1194	n:1500000
Cons ci ratio: 1.004938e-03	ci left: 9.098062e-01	ci right 9.107216e-01	k: 1365397	n:1500000
KS ci ratio: 1.355382e-01	ci left: 5.195543e-04	ci right 5.957289e-04	k: 835	n:1500000
TYSND1   1500000 perm   1272 sec   (1179 perm/sec)   p_kst 5.566667e-04   p_cons 9.102647e-01   p_joint 7.960000e-04

Joint ci ratio: 1.129744e-01	ci left: 7.516723e-04	ci right 8.423130e-04	k: 1202	n:1510000
Cons ci ratio: 1.001555e-03	ci left: 9.098159e-01	ci right 9.107282e-01	k: 1374512	n:1510000
KS ci ratio: 1.350544e-01	ci left: 5.199525e-04	ci right 5.958916e-04	k: 841	n:1510000
TYSND1   1510000 perm   1287 sec   (1173 perm/sec)   p_kst 5.569536e-04   p_cons 9.102728e-01   p_joint 7.960265e-04

Joint ci ratio: 1.126938e-01	ci left: 7.505630e-04	ci right 8.408302e-04	k: 1208	n:1520000
Cons ci ratio: 9.983181e-04	ci left: 9.098070e-01	ci right 9.107164e-01	k: 1383599	n:1520000
KS ci ratio: 1.348945e-01	ci left: 5.178031e-04	ci right 5.933315e-04	k: 843	n:1520000
TYSND1   1520000 perm   1303 sec   (1166 perm/sec)   p_kst 5.546053e-04   p_cons 9.102625e-01   p_joint 7.947368e-04

Joint ci ratio: 1.123690e-01	ci left: 7.501038e-04	ci right 8.400385e-04	k: 1215	n:1530000
Cons ci ratio: 9.950806e-04	ci left: 9.098035e-01	ci right 9.107099e-01	k: 1392694	n:1530000
KS ci ratio: 1.345760e-01	ci left: 5.169450e-04	ci right 5.921560e-04	k: 847	n:1530000
TYSND1   1530000 perm   1320 sec   (1160 perm/sec)   p_kst 5.535948e-04   p_cons 9.102575e-01   p_joint 7.941176e-04

Joint ci ratio: 1.121388e-01	ci left: 7.483885e-04	ci right 8.379216e-04	k: 1220	n:1540000
Cons ci ratio: 9.916142e-04	ci left: 9.098430e-01	ci right 9.107463e-01	k: 1401855	n:1540000
KS ci ratio: 1.341810e-01	ci left: 5.167258e-04	ci right 5.916667e-04	k: 852	n:1540000
TYSND1   1540000 perm   1335 sec   (1154 perm/sec)   p_kst 5.532468e-04   p_cons 9.102955e-01   p_joint 7.922078e-04

Joint ci ratio: 1.117732e-01	ci left: 7.485770e-04	ci right 8.378214e-04	k: 1228	n:1550000
Cons ci ratio: 9.882109e-04	ci left: 9.098775e-01	ci right 9.107777e-01	k: 1411009	n:1550000
KS ci ratio: 1.337895e-01	ci left: 5.165098e-04	ci right 5.911834e-04	k: 857	n:1550000
TYSND1   1550000 perm   1350 sec   (1148 perm/sec)   p_kst 5.529032e-04   p_cons 9.103284e-01   p_joint 7.922581e-04

Joint ci ratio: 1.104766e-01	ci left: 7.618518e-04	ci right 8.515567e-04	k: 1257	n:1560000
Cons ci ratio: 9.850860e-04	ci left: 9.098711e-01	ci right 9.107684e-01	k: 1420100	n:1560000
KS ci ratio: 1.331700e-01	ci left: 5.181558e-04	ci right 5.926930e-04	k: 865	n:1560000
TYSND1   1560000 perm   1366 sec   (1142 perm/sec)   p_kst 5.544872e-04   p_cons 9.103205e-01   p_joint 8.057692e-04

Joint ci ratio: 1.102142e-01	ci left: 7.607153e-04	ci right 8.500599e-04	k: 1263	n:1570000
Cons ci ratio: 9.819407e-04	ci left: 9.098730e-01	ci right 9.107675e-01	k: 1429204	n:1570000
KS ci ratio: 1.330166e-01	ci left: 5.160869e-04	ci right 5.902342e-04	k: 867	n:1570000
TYSND1   1570000 perm   1381 sec   (1137 perm/sec)   p_kst 5.522293e-04   p_cons 9.103210e-01   p_joint 8.044586e-04

Joint ci ratio: 1.099103e-01	ci left: 7.602091e-04	ci right 8.492320e-04	k: 1270	n:1580000
Cons ci ratio: 9.789430e-04	ci left: 9.098553e-01	ci right 9.107470e-01	k: 1438277	n:1580000
KS ci ratio: 1.324834e-01	ci left: 5.171038e-04	ci right 5.910760e-04	k: 874	n:1580000
TYSND1   1580000 perm   1397 sec   (1131 perm/sec)   p_kst 5.531646e-04   p_cons 9.103019e-01   p_joint 8.037975e-04

Joint ci ratio: 1.094804e-01	ci left: 7.615447e-04	ci right 8.503527e-04	k: 1280	n:1590000
Cons ci ratio: 9.758259e-04	ci left: 9.098623e-01	ci right 9.107513e-01	k: 1447389	n:1590000
KS ci ratio: 1.318072e-01	ci left: 5.193249e-04	ci right 5.932059e-04	k: 883	n:1590000
TYSND1   1590000 perm   1413 sec   (1125 perm/sec)   p_kst 5.553459e-04   p_cons 9.103075e-01   p_joint 8.050314e-04

Joint ci ratio: 1.091825e-01	ci left: 7.610404e-04	ci right 8.495326e-04	k: 1287	n:1600000
Cons ci ratio: 9.726900e-04	ci left: 9.098775e-01	ci right 9.107635e-01	k: 1456514	n:1600000
KS ci ratio: 1.313621e-01	ci left: 5.197056e-04	ci right 5.933717e-04	k: 889	n:1600000
TYSND1   1600000 perm   1429 sec   (1120 perm/sec)   p_kst 5.556250e-04   p_cons 9.103212e-01   p_joint 8.043750e-04

Joint ci ratio: 1.088871e-01	ci left: 7.605427e-04	ci right 8.487224e-04	k: 1294	n:1610000
Cons ci ratio: 9.695805e-04	ci left: 9.098930e-01	ci right 9.107763e-01	k: 1465640	n:1610000
KS ci ratio: 1.310680e-01	ci left: 5.188806e-04	ci right 5.922522e-04	k: 893	n:1610000
TYSND1   1610000 perm   1444 sec   (1115 perm/sec)   p_kst 5.546584e-04   p_cons 9.103354e-01   p_joint 8.037267e-04

Joint ci ratio: 1.191868e-01	ci left: 6.275067e-04	ci right 7.076291e-04	k: 1080	n:1620000
Cons ci ratio: 9.667308e-04	ci left: 9.098694e-01	ci right 9.107501e-01	k: 1474703	n:1620000
KS ci ratio: 1.306303e-01	ci left: 5.192601e-04	ci right 5.924212e-04	k: 899	n:1620000
TYSND1   1620000 perm   1460 sec   (1109 perm/sec)   p_kst 5.549383e-04   p_cons 9.103105e-01   p_joint 6.666667e-04

Joint ci ratio: 1.186936e-01	ci left: 6.290142e-04	ci right 7.089735e-04	k: 1089	n:1630000
Cons ci ratio: 9.638082e-04	ci left: 9.098627e-01	ci right 9.107407e-01	k: 1483793	n:1630000
KS ci ratio: 1.299819e-01	ci left: 5.214160e-04	ci right 5.944880e-04	k: 908	n:1630000
TYSND1   1630000 perm   1476 sec   (1104 perm/sec)   p_kst 5.570552e-04   p_cons 9.103025e-01   p_joint 6.680982e-04

Joint ci ratio: 1.179384e-01	ci left: 6.334628e-04	ci right 7.134395e-04	k: 1103	n:1640000
Cons ci ratio: 9.608761e-04	ci left: 9.098622e-01	ci right 9.107375e-01	k: 1492893	n:1640000
KS ci ratio: 1.292726e-01	ci left: 5.241365e-04	ci right 5.971582e-04	k: 918	n:1640000
TYSND1   1640000 perm   1492 sec   (1099 perm/sec)   p_kst 5.597561e-04   p_cons 9.103006e-01   p_joint 6.725610e-04

Joint ci ratio: 1.176192e-01	ci left: 6.331529e-04	ci right 7.128590e-04	k: 1109	n:1650000
Cons ci ratio: 9.579244e-04	ci left: 9.098696e-01	ci right 9.107422e-01	k: 1502006	n:1650000
KS ci ratio: 1.289922e-01	ci left: 5.233058e-04	ci right 5.960416e-04	k: 922	n:1650000
TYSND1   1650000 perm   1509 sec   (1094 perm/sec)   p_kst 5.587879e-04   p_cons 9.103067e-01   p_joint 6.721212e-04

Joint ci ratio: 1.170406e-01	ci left: 6.357708e-04	ci right 7.153855e-04	k: 1120	n:1660000
Cons ci ratio: 9.549187e-04	ci left: 9.098909e-01	ci right 9.107607e-01	k: 1511142	n:1660000
KS ci ratio: 1.282989e-01	ci left: 5.259836e-04	ci right 5.986688e-04	k: 932	n:1660000
TYSND1   1660000 perm   1525 sec   (1088 perm/sec)   p_kst 5.614458e-04   p_cons 9.103265e-01   p_joint 6.746988e-04

Joint ci ratio: 1.166768e-01	ci left: 6.360329e-04	ci right 7.154159e-04	k: 1127	n:1670000
Cons ci ratio: 9.521750e-04	ci left: 9.098716e-01	ci right 9.107390e-01	k: 1520211	n:1670000
KS ci ratio: 1.279565e-01	ci left: 5.257321e-04	ci right 5.981738e-04	k: 937	n:1670000
TYSND1   1670000 perm   1542 sec   (1083 perm/sec)   p_kst 5.610778e-04   p_cons 9.103060e-01   p_joint 6.748503e-04

Joint ci ratio: 1.164192e-01	ci left: 6.351364e-04	ci right 7.142204e-04	k: 1132	n:1680000
Cons ci ratio: 9.493060e-04	ci left: 9.098782e-01	ci right 9.107430e-01	k: 1529323	n:1680000
KS ci ratio: 1.277525e-01	ci left: 5.243313e-04	ci right 5.964561e-04	k: 940	n:1680000
TYSND1   1680000 perm   1558 sec   (1078 perm/sec)   p_kst 5.595238e-04   p_cons 9.103113e-01   p_joint 6.738095e-04

Joint ci ratio: 1.160612e-01	ci left: 6.353998e-04	ci right 7.142566e-04	k: 1139	n:1690000
Cons ci ratio: 9.466170e-04	ci left: 9.098581e-01	ci right 9.107204e-01	k: 1538390	n:1690000
KS ci ratio: 1.273472e-01	ci left: 5.246658e-04	ci right 5.965903e-04	k: 946	n:1690000
TYSND1   1690000 perm   1575 sec   (1073 perm/sec)   p_kst 5.597633e-04   p_cons 9.102899e-01   p_joint 6.739645e-04

Joint ci ratio: 1.155051e-01	ci left: 6.379454e-04	ci right 7.167129e-04	k: 1150	n:1700000
Cons ci ratio: 9.438896e-04	ci left: 9.098488e-01	ci right 9.107086e-01	k: 1547475	n:1700000
KS ci ratio: 1.266799e-01	ci left: 5.272750e-04	ci right 5.991500e-04	k: 956	n:1700000
TYSND1   1700000 perm   1592 sec   (1068 perm/sec)   p_kst 5.623529e-04   p_cons 9.102794e-01   p_joint 6.764706e-04

Joint ci ratio: 1.150561e-01	ci left: 6.393261e-04	ci right 7.179365e-04	k: 1159	n:1710000
Cons ci ratio: 9.409194e-04	ci left: 9.098860e-01	ci right 9.107431e-01	k: 1556639	n:1710000
KS ci ratio: 1.262191e-01	ci left: 5.281556e-04	ci right 5.998692e-04	k: 963	n:1710000
TYSND1   1710000 perm   1609 sec   (1063 perm/sec)   p_kst 5.631579e-04   p_cons 9.103152e-01   p_joint 6.777778e-04

Joint ci ratio: 1.146123e-01	ci left: 6.406914e-04	ci right 7.191452e-04	k: 1168	n:1720000
Cons ci ratio: 9.380470e-04	ci left: 9.099104e-01	ci right 9.107649e-01	k: 1565782	n:1720000
KS ci ratio: 1.257632e-01	ci left: 5.290265e-04	ci right 6.005796e-04	k: 970	n:1720000
TYSND1   1720000 perm   1626 sec   (1058 perm/sec)   p_kst 5.639535e-04   p_cons 9.103384e-01   p_joint 6.790698e-04

Joint ci ratio: 1.141251e-01	ci left: 6.426030e-04	ci right 7.209339e-04	k: 1178	n:1730000
Cons ci ratio: 9.352140e-04	ci left: 9.099323e-01	ci right 9.107842e-01	k: 1574921	n:1730000
KS ci ratio: 1.251204e-01	ci left: 5.315675e-04	ci right 6.030696e-04	k: 980	n:1730000
TYSND1   1730000 perm   1643 sec   (1053 perm/sec)   p_kst 5.664740e-04   p_cons 9.103590e-01   p_joint 6.809249e-04

Joint ci ratio: 1.137398e-01	ci left: 6.433766e-04	ci right 7.215192e-04	k: 1186	n:1740000
Cons ci ratio: 9.324918e-04	ci left: 9.099390e-01	ci right 9.107884e-01	k: 1584034	n:1740000
KS ci ratio: 1.247395e-01	ci left: 5.318530e-04	ci right 6.031596e-04	k: 986	n:1740000
TYSND1   1740000 perm   1660 sec   (1048 perm/sec)   p_kst 5.666667e-04   p_cons 9.103644e-01   p_joint 6.816092e-04

Joint ci ratio: 1.134534e-01	ci left: 6.430313e-04	ci right 7.209222e-04	k: 1192	n:1750000
Cons ci ratio: 9.297314e-04	ci left: 9.099564e-01	ci right 9.108034e-01	k: 1593166	n:1750000
KS ci ratio: 1.244876e-01	ci left: 5.310283e-04	ci right 6.020700e-04	k: 990	n:1750000
TYSND1   1750000 perm   1677 sec   (1044 perm/sec)   p_kst 5.657143e-04   p_cons 9.103806e-01   p_joint 6.811429e-04

Joint ci ratio: 1.129338e-01	ci left: 6.454508e-04	ci right 7.232529e-04	k: 1203	n:1760000
Cons ci ratio: 9.269695e-04	ci left: 9.099782e-01	ci right 9.108227e-01	k: 1602306	n:1760000
KS ci ratio: 1.240502e-01	ci left: 5.318648e-04	ci right 6.027499e-04	k: 997	n:1760000
TYSND1   1760000 perm   1695 sec   (1039 perm/sec)   p_kst 5.664773e-04   p_cons 9.104011e-01   p_joint 6.835227e-04

Joint ci ratio: 1.126535e-01	ci left: 6.450984e-04	ci right 7.226521e-04	k: 1209	n:1770000
Cons ci ratio: 9.244145e-04	ci left: 9.099675e-01	ci right 9.108097e-01	k: 1611389	n:1770000
KS ci ratio: 1.237406e-01	ci left: 5.315972e-04	ci right 6.022569e-04	k: 1002	n:1770000
TYSND1   1770000 perm   1712 sec   (1034 perm/sec)   p_kst 5.661017e-04   p_cons 9.103893e-01   p_joint 6.830508e-04

Joint ci ratio: 1.125607e-01	ci left: 6.425661e-04	ci right 7.197476e-04	k: 1211	n:1780000
Cons ci ratio: 9.216837e-04	ci left: 9.099919e-01	ci right 9.108315e-01	k: 1620534	n:1780000
KS ci ratio: 1.236176e-01	ci left: 5.296995e-04	ci right 6.000319e-04	k: 1004	n:1780000
TYSND1   1780000 perm   1729 sec   (1029 perm/sec)   p_kst 5.640449e-04   p_cons 9.104124e-01   p_joint 6.803371e-04

Joint ci ratio: 1.123293e-01	ci left: 6.416911e-04	ci right 7.185985e-04	k: 1216	n:1790000
Cons ci ratio: 9.192318e-04	ci left: 9.099706e-01	ci right 9.108080e-01	k: 1629598	n:1790000
KS ci ratio: 1.233724e-01	ci left: 5.289059e-04	ci right 5.989834e-04	k: 1008	n:1790000
TYSND1   1790000 perm   1747 sec   (1025 perm/sec)   p_kst 5.631285e-04   p_cons 9.103899e-01   p_joint 6.793296e-04

Joint ci ratio: 1.120076e-01	ci left: 6.419059e-04	ci right 7.186042e-04	k: 1223	n:1800000
Cons ci ratio: 9.167401e-04	ci left: 9.099601e-01	ci right 9.107952e-01	k: 1638681	n:1800000
KS ci ratio: 1.230072e-01	ci left: 5.291981e-04	ci right 5.990917e-04	k: 1014	n:1800000
TYSND1   1800000 perm   1764 sec   (1020 perm/sec)   p_kst 5.633333e-04   p_cons 9.103783e-01   p_joint 6.794444e-04

Joint ci ratio: 1.115980e-01	ci left: 6.431928e-04	ci right 7.197454e-04	k: 1232	n:1810000
Cons ci ratio: 9.141632e-04	ci left: 9.099686e-01	ci right 9.108014e-01	k: 1647798	n:1810000
KS ci ratio: 1.224653e-01	ci left: 5.310941e-04	ci right 6.009067e-04	k: 1023	n:1810000
TYSND1   1810000 perm   1782 sec   (1016 perm/sec)   p_kst 5.651934e-04   p_cons 9.103856e-01   p_joint 6.806630e-04

Joint ci ratio: 1.113725e-01	ci left: 6.423294e-04	ci right 7.186146e-04	k: 1237	n:1820000
Cons ci ratio: 9.116878e-04	ci left: 9.099627e-01	ci right 9.107932e-01	k: 1656889	n:1820000
KS ci ratio: 1.222269e-01	ci left: 5.303066e-04	ci right 5.998701e-04	k: 1027	n:1820000
TYSND1   1820000 perm   1800 sec   (1011 perm/sec)   p_kst 5.642857e-04   p_cons 9.103786e-01   p_joint 6.796703e-04

Joint ci ratio: 1.111483e-01	ci left: 6.414756e-04	ci right 7.174960e-04	k: 1242	n:1830000
Cons ci ratio: 9.092567e-04	ci left: 9.099524e-01	ci right 9.107807e-01	k: 1665972	n:1830000
KS ci ratio: 1.219898e-01	ci left: 5.295277e-04	ci right 5.988446e-04	k: 1031	n:1830000
TYSND1   1830000 perm   1817 sec   (1007 perm/sec)   p_kst 5.633880e-04   p_cons 9.103672e-01   p_joint 6.786885e-04

Joint ci ratio: 1.108366e-01	ci left: 6.416881e-04	ci right 7.175064e-04	k: 1249	n:1840000
Cons ci ratio: 9.067332e-04	ci left: 9.099624e-01	ci right 9.107884e-01	k: 1675092	n:1840000
KS ci ratio: 1.216367e-01	ci left: 5.298114e-04	ci right 5.989502e-04	k: 1037	n:1840000
TYSND1   1840000 perm   1836 sec   (1002 perm/sec)   p_kst 5.635870e-04   p_cons 9.103761e-01   p_joint 6.788043e-04

Joint ci ratio: 1.105716e-01	ci left: 6.413729e-04	ci right 7.169611e-04	k: 1255	n:1850000
Cons ci ratio: 9.041887e-04	ci left: 9.099799e-01	ci right 9.108036e-01	k: 1684226	n:1850000
KS ci ratio: 1.213448e-01	ci left: 5.295681e-04	ci right 5.984974e-04	k: 1042	n:1850000
TYSND1   1850000 perm   1854 sec   (998 perm/sec)   p_kst 5.632432e-04   p_cons 9.103924e-01   p_joint 6.783784e-04

Joint ci ratio: 1.099170e-01	ci left: 6.457669e-04	ci right 7.213931e-04	k: 1270	n:1860000
Cons ci ratio: 9.016802e-04	ci left: 9.099946e-01	ci right 9.108160e-01	k: 1693355	n:1860000
KS ci ratio: 1.205383e-01	ci left: 5.340202e-04	ci right 6.030341e-04	k: 1056	n:1860000
TYSND1   1860000 perm   1872 sec   (994 perm/sec)   p_kst 5.677419e-04   p_cons 9.104059e-01   p_joint 6.827957e-04

Joint ci ratio: 1.094870e-01	ci left: 6.475145e-04	ci right 7.230296e-04	k: 1280	n:1870000
Cons ci ratio: 8.993075e-04	ci left: 9.099881e-01	ci right 9.108074e-01	k: 1702445	n:1870000
KS ci ratio: 1.201976e-01	ci left: 5.342764e-04	ci right 6.031144e-04	k: 1062	n:1870000
TYSND1   1870000 perm   1890 sec   (989 perm/sec)   p_kst 5.679144e-04   p_cons 9.103984e-01   p_joint 6.844920e-04

Joint ci ratio: 8.638356e-02	ci left: 1.046875e-03	ci right 1.141906e-03	k: 2056	n:1880000
Cons ci ratio: 8.969535e-04	ci left: 9.099818e-01	ci right 9.107989e-01	k: 1711535	n:1880000
KS ci ratio: 1.199722e-01	ci left: 5.334983e-04	ci right 6.020979e-04	k: 1066	n:1880000
TYSND1   1880000 perm   1908 sec   (985 perm/sec)   p_kst 5.670213e-04   p_cons 9.103910e-01   p_joint 1.093617e-03

Joint ci ratio: 8.625796e-02	ci left: 1.044442e-03	ci right 1.139108e-03	k: 2062	n:1890000
Cons ci ratio: 8.943247e-04	ci left: 9.100290e-01	ci right 9.108438e-01	k: 1720726	n:1890000
KS ci ratio: 1.198039e-01	ci left: 5.322152e-04	ci right 6.005471e-04	k: 1069	n:1890000
TYSND1   1890000 perm   1926 sec   (981 perm/sec)   p_kst 5.656085e-04   p_cons 9.104370e-01   p_joint 1.091005e-03

Joint ci ratio: 1.087678e-01	ci left: 6.459938e-04	ci right 7.208049e-04	k: 1297	n:1900000
Cons ci ratio: 8.920297e-04	ci left: 9.100188e-01	ci right 9.108315e-01	k: 1729809	n:1900000
KS ci ratio: 1.194139e-01	ci left: 5.329881e-04	ci right 6.011807e-04	k: 1076	n:1900000
TYSND1   1900000 perm   1945 sec   (977 perm/sec)   p_kst 5.663158e-04   p_cons 9.104258e-01   p_joint 6.826316e-04

Joint ci ratio: 1.084341e-01	ci left: 6.466863e-04	ci right 7.213332e-04	k: 1305	n:1910000
Cons ci ratio: 8.898492e-04	ci left: 9.099909e-01	ci right 9.108015e-01	k: 1738858	n:1910000
KS ci ratio: 1.190277e-01	ci left: 5.337532e-04	ci right 6.018073e-04	k: 1083	n:1910000
TYSND1   1910000 perm   1963 sec   (973 perm/sec)   p_kst 5.670157e-04   p_cons 9.103969e-01   p_joint 6.832461e-04

Joint ci ratio: 1.083099e-01	ci left: 6.448383e-04	ci right 7.191812e-04	k: 1308	n:1920000
Cons ci ratio: 8.874438e-04	ci left: 9.100077e-01	ci right 9.108161e-01	k: 1747992	n:1920000
KS ci ratio: 1.189182e-01	ci left: 5.319839e-04	ci right 5.997456e-04	k: 1085	n:1920000
TYSND1   1920000 perm   1982 sec   (969 perm/sec)   p_kst 5.651042e-04   p_cons 9.104125e-01   p_joint 6.812500e-04

Joint ci ratio: 1.080625e-01	ci left: 6.445218e-04	ci right 7.186477e-04	k: 1314	n:1930000
Cons ci ratio: 8.851758e-04	ci left: 9.100024e-01	ci right 9.108088e-01	k: 1757084	n:1930000
KS ci ratio: 1.186998e-01	ci left: 5.312384e-04	ci right 5.987722e-04	k: 1089	n:1930000
TYSND1   1930000 perm   2001 sec   (965 perm/sec)   p_kst 5.642487e-04   p_cons 9.104062e-01   p_joint 6.808290e-04

Joint ci ratio: 1.078168e-01	ci left: 6.442088e-04	ci right 7.181196e-04	k: 1320	n:1940000
Cons ci ratio: 8.828135e-04	ci left: 9.100179e-01	ci right 9.108221e-01	k: 1766216	n:1940000
KS ci ratio: 1.184827e-01	ci left: 5.305008e-04	ci right 5.978088e-04	k: 1093	n:1940000
TYSND1   1940000 perm   2019 sec   (961 perm/sec)   p_kst 5.634021e-04   p_cons 9.104206e-01   p_joint 6.804124e-04

Joint ci ratio: 1.076134e-01	ci left: 6.434002e-04	ci right 7.170701e-04	k: 1325	n:1950000
Cons ci ratio: 8.804451e-04	ci left: 9.100378e-01	ci right 9.108399e-01	k: 1775357	n:1950000
KS ci ratio: 1.182129e-01	ci left: 5.302684e-04	ci right 5.973831e-04	k: 1098	n:1950000
TYSND1   1950000 perm   2038 sec   (957 perm/sec)   p_kst 5.630769e-04   p_cons 9.104395e-01   p_joint 6.794872e-04

Joint ci ratio: 1.073708e-01	ci left: 6.430965e-04	ci right 7.165551e-04	k: 1331	n:1960000
Cons ci ratio: 8.782577e-04	ci left: 9.100274e-01	ci right 9.108275e-01	k: 1784439	n:1960000
KS ci ratio: 1.178915e-01	ci left: 5.305338e-04	ci right 5.974868e-04	k: 1104	n:1960000
TYSND1   1960000 perm   2057 sec   (953 perm/sec)   p_kst 5.632653e-04   p_cons 9.104281e-01   p_joint 6.790816e-04

Joint ci ratio: 1.071298e-01	ci left: 6.427960e-04	ci right 7.160451e-04	k: 1337	n:1970000
Cons ci ratio: 8.759802e-04	ci left: 9.100369e-01	ci right 9.108350e-01	k: 1793560	n:1970000
KS ci ratio: 1.175727e-01	ci left: 5.307968e-04	ci right 5.975892e-04	k: 1110	n:1970000
TYSND1   1970000 perm   2076 sec   (949 perm/sec)   p_kst 5.634518e-04   p_cons 9.104365e-01   p_joint 6.786802e-04

Joint ci ratio: 1.070100e-01	ci left: 6.410241e-04	ci right 7.139845e-04	k: 1340	n:1980000
Cons ci ratio: 8.737474e-04	ci left: 9.100413e-01	ci right 9.108373e-01	k: 1802671	n:1980000
KS ci ratio: 1.174143e-01	ci left: 5.295866e-04	ci right 5.961307e-04	k: 1113	n:1980000
TYSND1   1980000 perm   2095 sec   (945 perm/sec)   p_kst 5.621212e-04   p_cons 9.104399e-01   p_joint 6.767677e-04

Joint ci ratio: 1.066922e-01	ci left: 6.417155e-04	ci right 7.145241e-04	k: 1348	n:1990000
Cons ci ratio: 8.714859e-04	ci left: 9.100542e-01	ci right 9.108481e-01	k: 1811799	n:1990000
KS ci ratio: 1.170471e-01	ci left: 5.303398e-04	ci right 5.967558e-04	k: 1120	n:1990000
TYSND1   1990000 perm   2114 sec   (941 perm/sec)   p_kst 5.628141e-04   p_cons 9.104518e-01   p_joint 6.773869e-04

Joint ci ratio: 1.066133e-01	ci left: 6.394803e-04	ci right 7.119782e-04	k: 1350	n:2000000
Cons ci ratio: 8.693405e-04	ci left: 9.100484e-01	ci right 9.108404e-01	k: 1820890	n:2000000
KS ci ratio: 1.169951e-01	ci left: 5.281734e-04	ci right 5.942867e-04	k: 1121	n:2000000
TYSND1   2000000 perm   2134 sec   (937 perm/sec)   p_kst 5.605000e-04   p_cons 9.104450e-01   p_joint 6.750000e-04

Joint ci ratio: 1.064166e-01	ci left: 6.387200e-04	ci right 7.109899e-04	k: 1355	n:2010000
Cons ci ratio: 8.672187e-04	ci left: 9.100412e-01	ci right 9.108312e-01	k: 1829978	n:2010000
KS ci ratio: 1.167872e-01	ci left: 5.274775e-04	ci right 5.933782e-04	k: 1125	n:2010000
TYSND1   2010000 perm   2153 sec   (934 perm/sec)   p_kst 5.597015e-04   p_cons 9.104368e-01   p_joint 6.741294e-04

Joint ci ratio: 1.061820e-01	ci left: 6.384494e-04	ci right 7.105193e-04	k: 1361	n:2020000
Cons ci ratio: 8.650521e-04	ci left: 9.100455e-01	ci right 9.108335e-01	k: 1839089	n:2020000
KS ci ratio: 1.165803e-01	ci left: 5.267887e-04	ci right 5.924787e-04	k: 1129	n:2020000
TYSND1   2020000 perm   2172 sec   (930 perm/sec)   p_kst 5.589109e-04   p_cons 9.104401e-01   p_joint 6.737624e-04

Joint ci ratio: 1.060265e-01	ci left: 6.372224e-04	ci right 7.090420e-04	k: 1365	n:2030000
Cons ci ratio: 8.628755e-04	ci left: 9.100546e-01	ci right 9.108407e-01	k: 1848210	n:2030000
KS ci ratio: 1.163746e-01	ci left: 5.261067e-04	ci right 5.915879e-04	k: 1133	n:2030000
TYSND1   2030000 perm   2192 sec   (926 perm/sec)   p_kst 5.581281e-04   p_cons 9.104483e-01   p_joint 6.724138e-04

Joint ci ratio: 1.058330e-01	ci left: 6.364848e-04	ci right 7.080822e-04	k: 1370	n:2040000
Cons ci ratio: 8.607489e-04	ci left: 9.100573e-01	ci right 9.108415e-01	k: 1857318	n:2040000
KS ci ratio: 1.161189e-01	ci left: 5.259074e-04	ci right 5.912102e-04	k: 1138	n:2040000
TYSND1   2040000 perm   2212 sec   (922 perm/sec)   p_kst 5.578431e-04   p_cons 9.104500e-01   p_joint 6.715686e-04

Joint ci ratio: 1.055256e-01	ci left: 6.371793e-04	ci right 7.086337e-04	k: 1378	n:2050000
Cons ci ratio: 8.585763e-04	ci left: 9.100717e-01	ci right 9.108539e-01	k: 1866450	n:2050000
KS ci ratio: 1.157637e-01	ci left: 5.266576e-04	ci right 5.918399e-04	k: 1145	n:2050000
TYSND1   2050000 perm   2232 sec   (918 perm/sec)   p_kst 5.585366e-04   p_cons 9.104634e-01   p_joint 6.721951e-04

Joint ci ratio: 1.053729e-01	ci left: 6.359768e-04	ci right 7.071867e-04	k: 1382	n:2060000
Cons ci ratio: 8.563690e-04	ci left: 9.100957e-01	ci right 9.108759e-01	k: 1875602	n:2060000
KS ci ratio: 1.156125e-01	ci left: 5.255152e-04	ci right 5.904653e-04	k: 1148	n:2060000
TYSND1   2060000 perm   2251 sec   (915 perm/sec)   p_kst 5.572816e-04   p_cons 9.104864e-01   p_joint 6.708738e-04

Joint ci ratio: 1.051451e-01	ci left: 6.357266e-04	ci right 7.067451e-04	k: 1388	n:2070000
Cons ci ratio: 8.542445e-04	ci left: 9.101069e-01	ci right 9.108852e-01	k: 1884728	n:2070000
KS ci ratio: 1.153118e-01	ci left: 5.257913e-04	ci right 5.905950e-04	k: 1154	n:2070000
TYSND1   2070000 perm   2271 sec   (911 perm/sec)   p_kst 5.574879e-04   p_cons 9.104966e-01   p_joint 6.705314e-04

Joint ci ratio: 1.048812e-01	ci left: 6.359473e-04	ci right 7.068011e-04	k: 1395	n:2080000
Cons ci ratio: 8.521633e-04	ci left: 9.101127e-01	ci right 9.108891e-01	k: 1893843	n:2080000
KS ci ratio: 1.150134e-01	ci left: 5.260650e-04	ci right 5.907233e-04	k: 1160	n:2080000
TYSND1   2080000 perm   2291 sec   (908 perm/sec)   p_kst 5.576923e-04   p_cons 9.105014e-01   p_joint 6.706731e-04

Joint ci ratio: 1.046192e-01	ci left: 6.361660e-04	ci right 7.068562e-04	k: 1402	n:2090000
Cons ci ratio: 8.501472e-04	ci left: 9.101088e-01	ci right 9.108833e-01	k: 1902938	n:2090000
KS ci ratio: 1.146682e-01	ci left: 5.268010e-04	ci right 5.913423e-04	k: 1167	n:2090000
TYSND1   2090000 perm   2311 sec   (904 perm/sec)   p_kst 5.583732e-04   p_cons 9.104967e-01   p_joint 6.708134e-04

Joint ci ratio: 1.042113e-01	ci left: 6.382380e-04	ci right 7.088651e-04	k: 1413	n:2100000
Cons ci ratio: 8.480288e-04	ci left: 9.101274e-01	ci right 9.109000e-01	k: 1912080	n:2100000
KS ci ratio: 1.141804e-01	ci left: 5.289181e-04	ci right 5.934245e-04	k: 1177	n:2100000
TYSND1   2100000 perm   2331 sec   (901 perm/sec)   p_kst 5.604762e-04   p_cons 9.105143e-01   p_joint 6.728571e-04

Joint ci ratio: 1.040276e-01	ci left: 6.375211e-04	ci right 7.079369e-04	k: 1418	n:2110000
Cons ci ratio: 8.461058e-04	ci left: 9.101112e-01	ci right 9.108820e-01	k: 1921149	n:2110000
KS ci ratio: 1.139388e-01	ci left: 5.287135e-04	ci right 5.930493e-04	k: 1182	n:2110000
TYSND1   2110000 perm   2351 sec   (897 perm/sec)   p_kst 5.601896e-04   p_cons 9.104972e-01   p_joint 6.720379e-04

Joint ci ratio: 1.038084e-01	ci left: 6.372705e-04	ci right 7.075013e-04	k: 1424	n:2120000
Cons ci ratio: 8.439808e-04	ci left: 9.101367e-01	ci right 9.109056e-01	k: 1930306	n:2120000
KS ci ratio: 1.136988e-01	ci left: 5.285109e-04	ci right 5.926775e-04	k: 1187	n:2120000
TYSND1   2120000 perm   2371 sec   (894 perm/sec)   p_kst 5.599057e-04   p_cons 9.105217e-01   p_joint 6.716981e-04

Joint ci ratio: 1.035544e-01	ci left: 6.374798e-04	ci right 7.075512e-04	k: 1431	n:2130000
Cons ci ratio: 8.420197e-04	ci left: 9.101332e-01	ci right 9.109004e-01	k: 1939402	n:2130000
KS ci ratio: 1.134603e-01	ci left: 5.283103e-04	ci right 5.923091e-04	k: 1192	n:2130000
TYSND1   2130000 perm   2391 sec   (891 perm/sec)   p_kst 5.596244e-04   p_cons 9.105174e-01   p_joint 6.718310e-04

Joint ci ratio: 1.032663e-01	ci left: 6.381426e-04	ci right 7.080799e-04	k: 1439	n:2140000
Cons ci ratio: 8.399324e-04	ci left: 9.101570e-01	ci right 9.109223e-01	k: 1948556	n:2140000
KS ci ratio: 1.130818e-01	ci left: 5.294740e-04	ci right 5.933854e-04	k: 1200	n:2140000
TYSND1   2140000 perm   2412 sec   (887 perm/sec)   p_kst 5.607477e-04   p_cons 9.105402e-01   p_joint 6.724299e-04

Joint ci ratio: 1.027678e-01	ci left: 6.415184e-04	ci right 7.114658e-04	k: 1453	n:2150000
Cons ci ratio: 8.379945e-04	ci left: 9.101545e-01	ci right 9.109179e-01	k: 1957654	n:2150000
KS ci ratio: 1.125209e-01	ci left: 5.324353e-04	ci right 5.963643e-04	k: 1212	n:2150000
TYSND1   2150000 perm   2432 sec   (884 perm/sec)   p_kst 5.637209e-04   p_cons 9.105367e-01   p_joint 6.758140e-04

Joint ci ratio: 1.025213e-01	ci left: 6.417060e-04	ci right 7.114958e-04	k: 1460	n:2160000
Cons ci ratio: 8.360604e-04	ci left: 9.101538e-01	ci right 9.109155e-01	k: 1966756	n:2160000
KS ci ratio: 1.122436e-01	ci left: 5.326700e-04	ci right 5.964591e-04	k: 1218	n:2160000
TYSND1   2160000 perm   2453 sec   (880 perm/sec)   p_kst 5.638889e-04   p_cons 9.105352e-01   p_joint 6.759259e-04

Joint ci ratio: 1.023114e-01	ci left: 6.414429e-04	ci right 7.110528e-04	k: 1466	n:2170000
Cons ci ratio: 8.341775e-04	ci left: 9.101457e-01	ci right 9.109057e-01	k: 1975842	n:2170000
KS ci ratio: 1.119684e-01	ci left: 5.329028e-04	ci right 5.965529e-04	k: 1224	n:2170000
TYSND1   2170000 perm   2474 sec   (877 perm/sec)   p_kst 5.640553e-04   p_cons 9.105263e-01   p_joint 6.755760e-04

Joint ci ratio: 1.020335e-01	ci left: 6.420765e-04	ci right 7.115546e-04	k: 1474	n:2180000
Cons ci ratio: 8.320611e-04	ci left: 9.101860e-01	ci right 9.109441e-01	k: 1985033	n:2180000
KS ci ratio: 1.116045e-01	ci left: 5.340254e-04	ci right 5.975887e-04	k: 1232	n:2180000
TYSND1   2180000 perm   2496 sec   (874 perm/sec)   p_kst 5.651376e-04   p_cons 9.105656e-01   p_joint 6.761468e-04

Joint ci ratio: 1.016209e-01	ci left: 6.444846e-04	ci right 7.139244e-04	k: 1486	n:2190000
Cons ci ratio: 8.301747e-04	ci left: 9.101838e-01	ci right 9.109402e-01	k: 1994132	n:2190000
KS ci ratio: 1.111098e-01	ci left: 5.364699e-04	ci right 6.000226e-04	k: 1243	n:2190000
TYSND1   2190000 perm   2517 sec   (870 perm/sec)   p_kst 5.675799e-04   p_cons 9.105626e-01   p_joint 6.785388e-04

Joint ci ratio: 1.013825e-01	ci left: 6.446562e-04	ci right 7.139418e-04	k: 1493	n:2200000
Cons ci ratio: 8.282387e-04	ci left: 9.101940e-01	ci right 9.109486e-01	k: 2003258	n:2200000
KS ci ratio: 1.108428e-01	ci left: 5.366830e-04	ci right 6.000982e-04	k: 1249	n:2200000
TYSND1   2200000 perm   2538 sec   (867 perm/sec)   p_kst 5.677273e-04   p_cons 9.105718e-01   p_joint 6.786364e-04

Joint ci ratio: 1.010449e-01	ci left: 6.461496e-04	ci right 7.153507e-04	k: 1503	n:2210000
Cons ci ratio: 8.263552e-04	ci left: 9.101963e-01	ci right 9.109492e-01	k: 2012367	n:2210000
KS ci ratio: 1.105337e-01	ci left: 5.373343e-04	ci right 6.006379e-04	k: 1256	n:2210000
TYSND1   2210000 perm   2559 sec   (864 perm/sec)   p_kst 5.683258e-04   p_cons 9.105733e-01   p_joint 6.800905e-04

Joint ci ratio: 1.008439e-01	ci left: 6.458734e-04	ci right 7.148993e-04	k: 1509	n:2220000
Cons ci ratio: 8.244936e-04	ci left: 9.101968e-01	ci right 9.109480e-01	k: 2021472	n:2220000
KS ci ratio: 1.103583e-01	ci left: 5.366659e-04	ci right 5.997839e-04	k: 1260	n:2220000
TYSND1   2220000 perm   2580 sec   (860 perm/sec)   p_kst 5.675676e-04   p_cons 9.105730e-01   p_joint 6.797297e-04

Joint ci ratio: 1.007440e-01	ci left: 6.442885e-04	ci right 7.130727e-04	k: 1512	n:2230000
Cons ci ratio: 8.225267e-04	ci left: 9.102207e-01	ci right 9.109701e-01	k: 2030629	n:2230000
KS ci ratio: 1.102710e-01	ci left: 5.351314e-04	ci right 5.980159e-04	k: 1262	n:2230000
TYSND1   2230000 perm   2601 sec   (857 perm/sec)   p_kst 5.659193e-04   p_cons 9.105960e-01   p_joint 6.780269e-04

Joint ci ratio: 1.004787e-01	ci left: 6.448938e-04	ci right 7.135506e-04	k: 1520	n:2240000
Cons ci ratio: 8.206661e-04	ci left: 9.102261e-01	ci right 9.109738e-01	k: 2039745	n:2240000
KS ci ratio: 1.100100e-01	ci left: 5.353472e-04	ci right 5.980985e-04	k: 1268	n:2240000
TYSND1   2240000 perm   2622 sec   (854 perm/sec)   p_kst 5.660714e-04   p_cons 9.106004e-01   p_joint 6.785714e-04

Joint ci ratio: 1.003140e-01	ci left: 6.441940e-04	ci right 7.126573e-04	k: 1525	n:2250000
Cons ci ratio: 8.188046e-04	ci left: 9.102340e-01	ci right 9.109800e-01	k: 2048867	n:2250000
KS ci ratio: 1.097939e-01	ci left: 5.351290e-04	ci right 5.977236e-04	k: 1273	n:2250000
TYSND1   2250000 perm   2644 sec   (851 perm/sec)   p_kst 5.657778e-04   p_cons 9.106076e-01   p_joint 6.777778e-04

Joint ci ratio: 1.000520e-01	ci left: 6.447947e-04	ci right 7.131324e-04	k: 1533	n:2260000
Cons ci ratio: 8.169979e-04	ci left: 9.102335e-01	ci right 9.109779e-01	k: 2057970	n:2260000
KS ci ratio: 1.096220e-01	ci left: 5.344825e-04	ci right 5.968973e-04	k: 1277	n:2260000
TYSND1   2260000 perm   2665 sec   (848 perm/sec)   p_kst 5.650442e-04   p_cons 9.106062e-01   p_joint 6.783186e-04

Joint ci ratio: 9.982451e-02	ci left: 6.449608e-04	ci right 7.131516e-04	k: 1540	n:2270000
Cons ci ratio: 8.152340e-04	ci left: 9.102268e-01	ci right 9.109695e-01	k: 2067059	n:2270000
KS ci ratio: 1.094082e-01	ci left: 5.342703e-04	ci right 5.965307e-04	k: 1282	n:2270000
TYSND1   2270000 perm   2686 sec   (845 perm/sec)   p_kst 5.647577e-04   p_cons 9.105987e-01   p_joint 6.784141e-04

Joint ci ratio: 9.966300e-02	ci left: 6.442703e-04	ci right 7.122714e-04	k: 1545	n:2280000
Cons ci ratio: 8.134442e-04	ci left: 9.102276e-01	ci right 9.109687e-01	k: 2076165	n:2280000
KS ci ratio: 1.091956e-01	ci left: 5.340600e-04	ci right 5.961673e-04	k: 1287	n:2280000
TYSND1   2280000 perm   2708 sec   (842 perm/sec)   p_kst 5.644737e-04   p_cons 9.105987e-01   p_joint 6.776316e-04

Joint ci ratio: 9.953438e-02	ci left: 6.431601e-04	ci right 7.109513e-04	k: 1549	n:2290000
Cons ci ratio: 8.117184e-04	ci left: 9.102179e-01	ci right 9.109575e-01	k: 2085247	n:2290000
KS ci ratio: 1.090265e-01	ci left: 5.334269e-04	ci right 5.953583e-04	k: 1291	n:2290000
TYSND1   2290000 perm   2730 sec   (839 perm/sec)   p_kst 5.637555e-04   p_cons 9.105882e-01   p_joint 6.764192e-04

Joint ci ratio: 9.915119e-02	ci left: 6.454516e-04	ci right 7.132071e-04	k: 1561	n:2300000
Cons ci ratio: 8.099321e-04	ci left: 9.102227e-01	ci right 9.109606e-01	k: 2094362	n:2300000
KS ci ratio: 1.086905e-01	ci left: 5.344913e-04	ci right 5.963427e-04	k: 1299	n:2300000
TYSND1   2300000 perm   2752 sec   (836 perm/sec)   p_kst 5.647826e-04   p_cons 9.105922e-01   p_joint 6.786957e-04

Joint ci ratio: 9.902454e-02	ci left: 6.443461e-04	ci right 7.118942e-04	k: 1565	n:2310000
Cons ci ratio: 8.082199e-04	ci left: 9.102148e-01	ci right 9.109512e-01	k: 2103448	n:2310000
KS ci ratio: 1.086071e-01	ci left: 5.330197e-04	ci right 5.946505e-04	k: 1301	n:2310000
TYSND1   2310000 perm   2774 sec   (833 perm/sec)   p_kst 5.632035e-04   p_cons 9.105835e-01   p_joint 6.774892e-04

Joint ci ratio: 9.870981e-02	ci left: 6.457725e-04	ci right 7.132425e-04	k: 1575	n:2320000
Cons ci ratio: 8.066402e-04	ci left: 9.101825e-01	ci right 9.109174e-01	k: 2112477	n:2320000
KS ci ratio: 1.082749e-01	ci left: 5.340770e-04	ci right 5.956291e-04	k: 1309	n:2320000
TYSND1   2320000 perm   2796 sec   (830 perm/sec)   p_kst 5.642241e-04   p_cons 9.105504e-01   p_joint 6.788793e-04

Joint ci ratio: 9.852246e-02	ci left: 6.455126e-04	ci right 7.128200e-04	k: 1581	n:2330000
Cons ci ratio: 8.049720e-04	ci left: 9.101701e-01	ci right 9.109035e-01	k: 2121552	n:2330000
KS ci ratio: 1.080688e-01	ci left: 5.338727e-04	ci right 5.952767e-04	k: 1314	n:2330000
TYSND1   2330000 perm   2819 sec   (827 perm/sec)   p_kst 5.639485e-04   p_cons 9.105373e-01   p_joint 6.785408e-04

Joint ci ratio: 9.815080e-02	ci left: 6.477561e-04	ci right 7.150280e-04	k: 1593	n:2340000
Cons ci ratio: 8.033268e-04	ci left: 9.101554e-01	ci right 9.108872e-01	k: 2130621	n:2340000
KS ci ratio: 1.076602e-01	ci left: 5.357494e-04	ci right 5.971215e-04	k: 1324	n:2340000
TYSND1   2340000 perm   2841 sec   (824 perm/sec)   p_kst 5.658120e-04   p_cons 9.105218e-01   p_joint 6.807692e-04

Joint ci ratio: 9.799726e-02	ci left: 6.470751e-04	ci right 7.141652e-04	k: 1598	n:2350000
Cons ci ratio: 8.016351e-04	ci left: 9.101522e-01	ci right 9.108825e-01	k: 2139717	n:2350000
KS ci ratio: 1.075386e-01	ci left: 5.347118e-04	ci right 5.958915e-04	k: 1327	n:2350000
TYSND1   2350000 perm   2863 sec   (821 perm/sec)   p_kst 5.646809e-04   p_cons 9.105179e-01   p_joint 6.800000e-04

Joint ci ratio: 9.769219e-02	ci left: 6.484669e-04	ci right 7.154800e-04	k: 1608	n:2360000
Cons ci ratio: 7.998999e-04	ci left: 9.101601e-01	ci right 9.108889e-01	k: 2148839	n:2360000
KS ci ratio: 1.071759e-01	ci left: 5.361573e-04	ci right 5.972824e-04	k: 1336	n:2360000
TYSND1   2360000 perm   2886 sec   (818 perm/sec)   p_kst 5.661017e-04   p_cons 9.105250e-01   p_joint 6.813559e-04

Joint ci ratio: 9.751057e-02	ci left: 6.482006e-04	ci right 7.150545e-04	k: 1614	n:2370000
Cons ci ratio: 7.981821e-04	ci left: 9.101667e-01	ci right 9.108939e-01	k: 2157958	n:2370000
KS ci ratio: 1.069362e-01	ci left: 5.363589e-04	ci right 5.973616e-04	k: 1342	n:2370000
TYSND1   2370000 perm   2909 sec   (815 perm/sec)   p_kst 5.662447e-04   p_cons 9.105308e-01   p_joint 6.810127e-04

Joint ci ratio: 9.723995e-02	ci left: 6.491665e-04	ci right 7.159236e-04	k: 1623	n:2380000
Cons ci ratio: 7.965000e-04	ci left: 9.101682e-01	ci right 9.108938e-01	k: 2167065	n:2380000
KS ci ratio: 1.066191e-01	ci left: 5.373769e-04	ci right 5.983028e-04	k: 1350	n:2380000
TYSND1   2380000 perm   2932 sec   (812 perm/sec)   p_kst 5.672269e-04   p_cons 9.105315e-01   p_joint 6.819328e-04

Joint ci ratio: 9.709064e-02	ci left: 6.484916e-04	ci right 7.150710e-04	k: 1628	n:2390000
Cons ci ratio: 7.947959e-04	ci left: 9.101764e-01	ci right 9.109005e-01	k: 2176188	n:2390000
KS ci ratio: 1.064616e-01	ci left: 5.367575e-04	ci right 5.975177e-04	k: 1354	n:2390000
TYSND1   2390000 perm   2955 sec   (809 perm/sec)   p_kst 5.665272e-04   p_cons 9.105389e-01   p_joint 6.811715e-04

Joint ci ratio: 9.685309e-02	ci left: 6.490420e-04	ci right 7.155057e-04	k: 1636	n:2400000
Cons ci ratio: 7.932709e-04	ci left: 9.101498e-01	ci right 9.108725e-01	k: 2185228	n:2400000
KS ci ratio: 1.062267e-01	ci left: 5.369545e-04	ci right 5.975945e-04	k: 1360	n:2400000
TYSND1   2400000 perm   2978 sec   (806 perm/sec)   p_kst 5.666667e-04   p_cons 9.105117e-01   p_joint 6.816667e-04

Joint ci ratio: 9.667610e-02	ci left: 6.487783e-04	ci right 7.150866e-04	k: 1642	n:2410000
Cons ci ratio: 7.915712e-04	ci left: 9.101613e-01	ci right 9.108825e-01	k: 2194359	n:2410000
KS ci ratio: 1.060321e-01	ci left: 5.367461e-04	ci right 5.972446e-04	k: 1365	n:2410000
TYSND1   2410000 perm   3001 sec   (803 perm/sec)   p_kst 5.663900e-04   p_cons 9.105224e-01   p_joint 6.813278e-04

Joint ci ratio: 9.647080e-02	ci left: 6.489201e-04	ci right 7.150941e-04	k: 1649	n:2420000
Cons ci ratio: 7.899606e-04	ci left: 9.101566e-01	ci right 9.108763e-01	k: 2203451	n:2420000
KS ci ratio: 1.058000e-01	ci left: 5.369418e-04	ci right 5.973216e-04	k: 1371	n:2420000
TYSND1   2420000 perm   3024 sec   (800 perm/sec)   p_kst 5.665289e-04   p_cons 9.105169e-01   p_joint 6.814050e-04

Joint ci ratio: 9.632500e-02	ci left: 6.482576e-04	ci right 7.142586e-04	k: 1654	n:2430000
Cons ci ratio: 7.883736e-04	ci left: 9.101490e-01	ci right 9.108673e-01	k: 2212536	n:2430000
KS ci ratio: 1.056078e-01	ci left: 5.367353e-04	ci right 5.969755e-04	k: 1376	n:2430000
TYSND1   2430000 perm   3047 sec   (797 perm/sec)   p_kst 5.662551e-04   p_cons 9.105086e-01   p_joint 6.806584e-04

Joint ci ratio: 9.600640e-02	ci left: 6.500006e-04	ci right 7.159478e-04	k: 1665	n:2440000
Cons ci ratio: 7.867210e-04	ci left: 9.101571e-01	ci right 9.108739e-01	k: 2221659	n:2440000
KS ci ratio: 1.052643e-01	ci left: 5.381269e-04	ci right 5.983146e-04	k: 1385	n:2440000
TYSND1   2440000 perm   3070 sec   (795 perm/sec)   p_kst 5.676230e-04   p_cons 9.105160e-01   p_joint 6.823770e-04

Joint ci ratio: 9.574808e-02	ci left: 6.509330e-04	ci right 7.167871e-04	k: 1674	n:2450000
Cons ci ratio: 7.851829e-04	ci left: 9.101435e-01	ci right 9.108588e-01	k: 2230729	n:2450000
KS ci ratio: 1.050372e-01	ci left: 5.383150e-04	ci right 5.983859e-04	k: 1391	n:2450000
TYSND1   2450000 perm   3093 sec   (792 perm/sec)   p_kst 5.677551e-04   p_cons 9.105016e-01   p_joint 6.832653e-04

Joint ci ratio: 9.546347e-02	ci left: 6.522548e-04	ci right 7.180355e-04	k: 1684	n:2460000
Cons ci ratio: 7.835698e-04	ci left: 9.101475e-01	ci right 9.108613e-01	k: 2239842	n:2460000
KS ci ratio: 1.047366e-01	ci left: 5.392935e-04	ci right 5.992907e-04	k: 1399	n:2460000
TYSND1   2460000 perm   3116 sec   (789 perm/sec)   p_kst 5.686992e-04   p_cons 9.105049e-01   p_joint 6.845528e-04

Joint ci ratio: 5.189366e-02	ci left: 2.245038e-03	ci right 2.365041e-03	k: 5692	n:2470000
Cons ci ratio: 7.820190e-04	ci left: 9.101405e-01	ci right 9.108529e-01	k: 2248928	n:2470000
KS ci ratio: 1.045128e-01	ci left: 5.394757e-04	ci right 5.993571e-04	k: 1405	n:2470000
TYSND1   2470000 perm   3139 sec   (787 perm/sec)   p_kst 5.688259e-04   p_cons 9.104972e-01   p_joint 2.304453e-03

Joint ci ratio: 5.180732e-02	ci left: 2.243547e-03	ci right 2.363265e-03	k: 5711	n:2480000
Cons ci ratio: 7.804986e-04	ci left: 9.101291e-01	ci right 9.108401e-01	k: 2258003	n:2480000
KS ci ratio: 1.043275e-01	ci left: 5.392639e-04	ci right 5.990091e-04	k: 1410	n:2480000
TYSND1   2480000 perm   3162 sec   (784 perm/sec)   p_kst 5.685484e-04   p_cons 9.104851e-01   p_joint 2.302823e-03

Joint ci ratio: 5.171689e-02	ci left: 2.242465e-03	ci right 2.361910e-03	k: 5731	n:2490000
Cons ci ratio: 7.789103e-04	ci left: 9.101339e-01	ci right 9.108435e-01	k: 2267118	n:2490000
KS ci ratio: 1.041064e-01	ci left: 5.394450e-04	ci right 5.990759e-04	k: 1416	n:2490000
TYSND1   2490000 perm   3186 sec   (782 perm/sec)   p_kst 5.686747e-04   p_cons 9.104892e-01   p_joint 2.301606e-03

Joint ci ratio: 5.160895e-02	ci left: 2.242971e-03	ci right 2.362186e-03	k: 5755	n:2500000
Cons ci ratio: 7.773583e-04	ci left: 9.101330e-01	ci right 9.108412e-01	k: 2276219	n:2500000
KS ci ratio: 1.038502e-01	ci left: 5.400144e-04	ci right 5.995523e-04	k: 1423	n:2500000
TYSND1   2500000 perm   3209 sec   (779 perm/sec)   p_kst 5.692000e-04   p_cons 9.104876e-01   p_joint 2.302000e-03

Joint ci ratio: 5.155088e-02	ci left: 2.239147e-03	ci right 2.358021e-03	k: 5768	n:2510000
Cons ci ratio: 7.758004e-04	ci left: 9.101354e-01	ci right 9.108421e-01	k: 2285328	n:2510000
KS ci ratio: 1.038138e-01	ci left: 5.382510e-04	ci right 5.975725e-04	k: 1424	n:2510000
TYSND1   2510000 perm   3234 sec   (776 perm/sec)   p_kst 5.673307e-04   p_cons 9.104892e-01   p_joint 2.298008e-03

Joint ci ratio: 5.147069e-02	ci left: 2.237313e-03	ci right 2.355899e-03	k: 5786	n:2520000
Cons ci ratio: 7.742179e-04	ci left: 9.101449e-01	ci right 9.108502e-01	k: 2294455	n:2520000
KS ci ratio: 1.037048e-01	ci left: 5.372746e-04	ci right 5.964225e-04	k: 1427	n:2520000
TYSND1   2520000 perm   3258 sec   (773 perm/sec)   p_kst 5.662698e-04   p_cons 9.104980e-01   p_joint 2.296032e-03

Joint ci ratio: 5.138201e-02	ci left: 2.236273e-03	ci right 2.354594e-03	k: 5806	n:2530000
Cons ci ratio: 7.725945e-04	ci left: 9.101650e-01	ci right 9.108688e-01	k: 2303609	n:2530000
KS ci ratio: 1.034515e-01	ci left: 5.378462e-04	ci right 5.969036e-04	k: 1434	n:2530000
TYSND1   2530000 perm   3284 sec   (770 perm/sec)   p_kst 5.667984e-04   p_cons 9.105174e-01   p_joint 2.294862e-03

Joint ci ratio: 5.128937e-02	ci left: 2.235630e-03	ci right 2.353698e-03	k: 5827	n:2540000
Cons ci ratio: 7.710184e-04	ci left: 9.101771e-01	ci right 9.108795e-01	k: 2312743	n:2540000
KS ci ratio: 1.033077e-01	ci left: 5.372627e-04	ci right 5.961691e-04	k: 1438	n:2540000
TYSND1   2540000 perm   3309 sec   (768 perm/sec)   p_kst 5.661417e-04   p_cons 9.105287e-01   p_joint 2.294094e-03

Joint ci ratio: 5.118408e-02	ci left: 2.236154e-03	ci right 2.354000e-03	k: 5851	n:2550000
Cons ci ratio: 7.695186e-04	ci left: 9.101749e-01	ci right 9.108759e-01	k: 2321841	n:2550000
KS ci ratio: 1.029150e-01	ci left: 5.393583e-04	ci right 5.982560e-04	k: 1449	n:2550000
TYSND1   2550000 perm   3333 sec   (765 perm/sec)   p_kst 5.682353e-04   p_cons 9.105259e-01   p_joint 2.294510e-03

Joint ci ratio: 5.109251e-02	ci left: 2.235518e-03	ci right 2.353113e-03	k: 5872	n:2560000
Cons ci ratio: 7.679852e-04	ci left: 9.101817e-01	ci right 9.108814e-01	k: 2330962	n:2560000
KS ci ratio: 1.027733e-01	ci left: 5.387738e-04	ci right 5.975218e-04	k: 1453	n:2560000
TYSND1   2560000 perm   3358 sec   (762 perm/sec)   p_kst 5.675781e-04   p_cons 9.105320e-01   p_joint 2.293750e-03

Joint ci ratio: 5.100143e-02	ci left: 2.234886e-03	ci right 2.352232e-03	k: 5893	n:2570000
Cons ci ratio: 7.664591e-04	ci left: 9.101889e-01	ci right 9.108872e-01	k: 2340084	n:2570000
KS ci ratio: 1.026323e-01	ci left: 5.381938e-04	ci right 5.967932e-04	k: 1457	n:2570000
TYSND1   2570000 perm   3383 sec   (760 perm/sec)   p_kst 5.669261e-04   p_cons 9.105385e-01   p_joint 2.292996e-03

Joint ci ratio: 5.088928e-02	ci left: 2.236173e-03	ci right 2.353321e-03	k: 5919	n:2580000
Cons ci ratio: 7.649438e-04	ci left: 9.101957e-01	ci right 9.108926e-01	k: 2349205	n:2580000
KS ci ratio: 1.023868e-01	ci left: 5.387514e-04	ci right 5.972627e-04	k: 1464	n:2580000
TYSND1   2580000 perm   3407 sec   (757 perm/sec)   p_kst 5.674419e-04   p_cons 9.105446e-01   p_joint 2.294186e-03

Joint ci ratio: 5.079071e-02	ci left: 2.236306e-03	ci right 2.353228e-03	k: 5942	n:2590000
Cons ci ratio: 7.634050e-04	ci left: 9.102093e-01	ci right 9.109048e-01	k: 2358344	n:2590000
KS ci ratio: 1.022473e-01	ci left: 5.381762e-04	ci right 5.965406e-04	k: 1468	n:2590000
TYSND1   2590000 perm   3432 sec   (755 perm/sec)   p_kst 5.667954e-04   p_cons 9.105575e-01   p_joint 2.294208e-03

Joint ci ratio: 5.070975e-02	ci left: 2.234920e-03	ci right 2.351577e-03	k: 5961	n:2600000
Cons ci ratio: 7.619527e-04	ci left: 9.102063e-01	ci right 9.109005e-01	k: 2367440	n:2600000
KS ci ratio: 1.020738e-01	ci left: 5.379802e-04	ci right 5.962184e-04	k: 1473	n:2600000
TYSND1   2600000 perm   3456 sec   (752 perm/sec)   p_kst 5.665385e-04   p_cons 9.105538e-01   p_joint 2.292692e-03

Joint ci ratio: 5.055722e-02	ci left: 2.239976e-03	ci right 2.356535e-03	k: 5997	n:2610000
Cons ci ratio: 7.605391e-04	ci left: 9.101968e-01	ci right 9.108897e-01	k: 2376519	n:2610000
KS ci ratio: 1.017978e-01	ci left: 5.389060e-04	ci right 5.970773e-04	k: 1481	n:2610000
TYSND1   2610000 perm   3481 sec   (750 perm/sec)   p_kst 5.674330e-04   p_cons 9.105437e-01   p_joint 2.297701e-03

Joint ci ratio: 5.046896e-02	ci left: 2.239340e-03	ci right 2.355657e-03	k: 6018	n:2620000
Cons ci ratio: 7.589999e-04	ci left: 9.102160e-01	ci right 9.109075e-01	k: 2385673	n:2620000
KS ci ratio: 1.016608e-01	ci left: 5.383369e-04	ci right 5.963639e-04	k: 1485	n:2620000
TYSND1   2620000 perm   3506 sec   (747 perm/sec)   p_kst 5.667939e-04   p_cons 9.105622e-01   p_joint 2.296947e-03

Joint ci ratio: 5.039372e-02	ci left: 2.237584e-03	ci right 2.353631e-03	k: 6036	n:2630000
Cons ci ratio: 7.575673e-04	ci left: 9.102142e-01	ci right 9.109043e-01	k: 2394772	n:2630000
KS ci ratio: 1.016267e-01	ci left: 5.366606e-04	ci right 5.944863e-04	k: 1486	n:2630000
TYSND1   2630000 perm   3531 sec   (745 perm/sec)   p_kst 5.650190e-04   p_cons 9.105597e-01   p_joint 2.295057e-03

Joint ci ratio: 5.029799e-02	ci left: 2.237710e-03	ci right 2.353537e-03	k: 6059	n:2640000
Cons ci ratio: 7.560565e-04	ci left: 9.102309e-01	ci right 9.109197e-01	k: 2403920	n:2640000
KS ci ratio: 1.014563e-01	ci left: 5.364736e-04	ci right 5.941765e-04	k: 1491	n:2640000
TYSND1   2640000 perm   3556 sec   (742 perm/sec)   p_kst 5.647727e-04   p_cons 9.105758e-01   p_joint 2.295076e-03

Joint ci ratio: 5.020281e-02	ci left: 2.237836e-03	ci right 2.353444e-03	k: 6082	n:2650000
Cons ci ratio: 7.546003e-04	ci left: 9.102377e-01	ci right 9.109252e-01	k: 2413042	n:2650000
KS ci ratio: 1.012191e-01	ci left: 5.370238e-04	ci right 5.946428e-04	k: 1498	n:2650000
TYSND1   2650000 perm   3582 sec   (740 perm/sec)   p_kst 5.652830e-04   p_cons 9.105819e-01   p_joint 2.295094e-03

Joint ci ratio: 5.007530e-02	ci left: 2.240932e-03	ci right 2.356397e-03	k: 6113	n:2660000
Cons ci ratio: 7.531454e-04	ci left: 9.102459e-01	ci right 9.109321e-01	k: 2422168	n:2660000
KS ci ratio: 1.010507e-01	ci left: 5.368370e-04	ci right 5.943345e-04	k: 1503	n:2660000
TYSND1   2660000 perm   3607 sec   (737 perm/sec)   p_kst 5.650376e-04   p_cons 9.105895e-01   p_joint 2.298120e-03

Joint ci ratio: 4.997730e-02	ci left: 2.241415e-03	ci right 2.356673e-03	k: 6137	n:2670000
Cons ci ratio: 7.517664e-04	ci left: 9.102395e-01	ci right 9.109244e-01	k: 2431255	n:2670000
KS ci ratio: 1.008831e-01	ci left: 5.366518e-04	ci right 5.940284e-04	k: 1508	n:2670000
TYSND1   2670000 perm   3632 sec   (735 perm/sec)   p_kst 5.647940e-04   p_cons 9.105824e-01   p_joint 2.298502e-03

Joint ci ratio: 4.987176e-02	ci left: 2.242632e-03	ci right 2.357702e-03	k: 6163	n:2680000
Cons ci ratio: 7.503536e-04	ci left: 9.102421e-01	ci right 9.109257e-01	k: 2440366	n:2680000
KS ci ratio: 1.006499e-01	ci left: 5.371955e-04	ci right 5.944897e-04	k: 1515	n:2680000
TYSND1   2680000 perm   3658 sec   (733 perm/sec)   p_kst 5.652985e-04   p_cons 9.105843e-01   p_joint 2.299627e-03

Joint ci ratio: 4.975882e-02	ci left: 2.244574e-03	ci right 2.359475e-03	k: 6191	n:2690000
Cons ci ratio: 7.489317e-04	ci left: 9.102484e-01	ci right 9.109307e-01	k: 2449487	n:2690000
KS ci ratio: 1.003195e-01	ci left: 5.388225e-04	ci right 5.960905e-04	k: 1525	n:2690000
TYSND1   2690000 perm   3683 sec   (730 perm/sec)   p_kst 5.669145e-04   p_cons 9.105900e-01   p_joint 2.301487e-03

Joint ci ratio: 4.967868e-02	ci left: 2.243576e-03	ci right 2.358236e-03	k: 6211	n:2700000
Cons ci ratio: 7.475042e-04	ci left: 9.102576e-01	ci right 9.109386e-01	k: 2458616	n:2700000
KS ci ratio: 1.002211e-01	ci left: 5.379101e-04	ci right 5.950217e-04	k: 1528	n:2700000
TYSND1   2700000 perm   3708 sec   (728 perm/sec)   p_kst 5.659259e-04   p_cons 9.105985e-01   p_joint 2.300370e-03

Joint ci ratio: 4.958299e-02	ci left: 2.244044e-03	ci right 2.358500e-03	k: 6235	n:2710000
Cons ci ratio: 7.461051e-04	ci left: 9.102623e-01	ci right 9.109420e-01	k: 2467733	n:2710000
KS ci ratio: 1.000250e-01	ci left: 5.380838e-04	ci right 5.950955e-04	k: 1534	n:2710000
TYSND1   2710000 perm   3733 sec   (726 perm/sec)   p_kst 5.660517e-04   p_cons 9.106026e-01   p_joint 2.300738e-03

Joint ci ratio: 4.949576e-02	ci left: 2.243781e-03	ci right 2.358018e-03	k: 6257	n:2720000
Cons ci ratio: 7.446988e-04	ci left: 9.102702e-01	ci right 9.109487e-01	k: 2476859	n:2720000
KS ci ratio: 9.989501e-02	ci left: 5.375394e-04	ci right 5.944150e-04	k: 1538	n:2720000
TYSND1   2720000 perm   3759 sec   (724 perm/sec)   p_kst 5.654412e-04   p_cons 9.106099e-01   p_joint 2.300368e-03

Outputting figure to mutsig2_images.part000000000185/TYSND1.2_1717_2720000_0.00056544_0.91061_0.0023004.png
                gene_name: TYSND1
               theta_stop: 0.100 
                    nperm: 2720000 
                     p_ks: 0.00057 
        ci_ks_bounds_left: 0.00054 
       ci_ks_bounds_right: 0.00059 
                   p_cons: 0.91 
      ci_cons_bounds_left: 0.91 
     ci_cons_bounds_right: 0.91 
                  p_joint: 0.0023 
     ci_joint_bounds_left: 0.0022 
    ci_joint_bounds_right: 0.0024 

Current progress: 50 percent done.
UBE2O
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.013153e-01	ci left: 1.235648e-01	ci right 1.368514e-01	k: 1301	n:10000
Cons ci ratio: 1.551513e-01	ci left: 5.532768e-02	ci right 6.473065e-02	k: 599	n:10000
KS ci ratio: 4.396556e-02	ci left: 4.330324e-01	ci right 4.526010e-01	k: 4428	n:10000
UBE2O   10000 perm   2 sec   (4959 perm/sec)   p_kst 4.428000e-01   p_cons 5.990000e-02   p_joint 1.301000e-01

Joint ci ratio: 1.121161e-01	ci left: 5.436186e-02	ci right 6.086750e-02	k: 1151	n:20000
Cons ci ratio: 1.083252e-01	ci left: 5.811191e-02	ci right 6.481629e-02	k: 1228	n:20000
KS ci ratio: 3.099671e-02	ci left: 4.373971e-01	ci right 4.512191e-01	k: 8886	n:20000
UBE2O   20000 perm   4 sec   (4470 perm/sec)   p_kst 4.443000e-01   p_cons 6.140000e-02   p_joint 5.755000e-02

Joint ci ratio: 7.084571e-02	ci left: 8.930995e-02	ci right 9.590252e-02	k: 2777	n:30000
Cons ci ratio: 8.810456e-02	ci left: 5.916639e-02	ci right 6.465217e-02	k: 1856	n:30000
KS ci ratio: 2.537446e-02	ci left: 4.374013e-01	ci right 4.486764e-01	k: 13291	n:30000
UBE2O   30000 perm   7 sec   (4208 perm/sec)   p_kst 4.430333e-01   p_cons 6.186667e-02   p_joint 9.256667e-02

Outputting figure to mutsig2_images.part000000000185/UBE2O.2_3951_30000_0.44303_0.061867_0.092567.png
                gene_name: UBE2O
               theta_stop: 0.088 
                    nperm: 30000 
                     p_ks: 0.44 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.45 
                   p_cons: 0.062 
      ci_cons_bounds_left: 0.059 
     ci_cons_bounds_right: 0.065 
                  p_joint: 0.093 
     ci_joint_bounds_left: 0.089 
    ci_joint_bounds_right: 0.096 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000185
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 185 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1649>
Subject: Job 8704407: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1649>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000186> was used as the working directory.
Started at Thu Nov 15 19:37:45 2012
Results reported at Thu Nov 15 19:41:55 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000186.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000186.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 186  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000186.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    285.74 sec.
    Max Memory :      6027 MB
    Max Swap   :      8432 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
186
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 186
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 186: processing genes 16737 - 16826
Calculating significance of each gene.
Using projection method.
16737	UBL5	1
16738	UBL7	1
16739	UBLCP1	1
16740	UBN1	1
16741	UBN2	4.002291e-02
16742	UBOX5	6.942088e-02
16743	UBP1	7.579152e-02
16744	UBQLN1	1
16745	UBQLN2	1
16746	UBQLN3	9.805694e-04
16747	UBQLN4	1
16748	UBQLNL	1
16749	UBR1	2.027930e-01
16750	UBR2	1
16751	UBR3	2.251601e-01
In gene UBR4 the following bins exceed PROBCAP:
    THCA-FE-A233-TP	categ 5	N = 15728   n = 1	mu =   1.41e-07
16752	UBR4	3.568398e-01
16753	UBR5	4.331331e-01
16754	UBR7	1
16755	UBTD1	1
16756	UBTD2	1
16757	UBTF	1
16758	UBTFL1	2.450379e-02
16759	UBXN1	1
16760	UBXN10	1
16761	UBXN11	1
16762	UBXN2A	1
16763	UBXN2B	9.315533e-02
16764	UBXN4	1
16765	UBXN6	6.750756e-02
16766	UBXN7	1
16767	UBXN8	1
16768	UCHL1	1
16769	UCHL3	1
16770	UCHL5	1
16771	UCK1	1
16772	UCK2	1
16773	UCKL1	1
16774	UCMA	1
16775	UCN	1
16776	UCN2	1
16777	UCN3	1
16778	UCP1	1
16779	UCP2	1
16780	UCP3	1
16781	UEVLD	1
16782	UFC1	1
16783	UFD1L	1
16784	UFM1	1
16785	UFSP1	1
16786	UFSP2	1
16787	UGCG	1
16788	UGDH	1
16789	UGGT1	1
16790	UGGT2	5.040006e-01
16791	UGP2	1
16792	UGT1A1	6.391281e-02
16793	UGT1A10	1
16794	UGT1A3	1
16795	UGT1A4	1
16796	UGT1A5	1
16797	UGT1A6	1
16798	UGT1A7	1
16799	UGT1A8	1
16800	UGT1A9	1
16801	UGT2A1	1.666692e-02
16802	UGT2A2	1
16803	UGT2A3	1
16804	UGT2B10	1
16805	UGT2B11	1
16806	UGT2B15	1
16807	UGT2B17	1
16808	UGT2B28	1
16809	UGT2B4	1
16810	UGT2B7	1.841086e-01
16811	UGT3A1	1
16812	UGT3A2	1
16813	UGT8	1
16814	UHMK1	1
16815	UHRF1	1
16816	UHRF1BP1	3.850026e-01
16817	UHRF1BP1L	1
In gene UHRF2 the following bins exceed PROBCAP:
    THCA-ET-A39T-TP	categ 6	N = 2433    n = 1	mu =   6.87e-08
16818	UHRF2	9.939813e-02
16819	UIMC1	1
16820	ULBP1	1
16821	ULBP2	1
16822	ULBP3	1
16823	ULK1	1
16824	ULK2	1
16825	ULK3	1.083068e-01
16826	ULK4	1.678231e-01
Done

Running MutSig 2:
Scatter job 186: processing genes 16737 - 16826
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
UBQLN3
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.196988e-02	ci left: 5.908220e-01	ci right 6.101194e-01	k: 6005	n:10000
KS ci ratio: 2.055786e-02	ci left: 7.761063e-01	ci right 7.923278e-01	k: 7843	n:10000
UBQLN3   10000 perm   2 sec   (5680 perm/sec)   p_kst 7.843000e-01   p_cons 6.005000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000186/UBQLN3.3_1972_10000_0.7843_0.6005_1.png
                gene_name: UBQLN3
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.78 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.79 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 20 percent done.
UBR4
Processing conservation and coverage...
62% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.442631e-02	ci left: 7.113894e-01	ci right 7.290822e-01	k: 7203	n:10000
Cons ci ratio: 4.619910e-02	ci left: 4.088062e-01	ci right 4.282413e-01	k: 4185	n:10000
KS ci ratio: 9.971200e-03	ci left: 9.344406e-01	ci right 9.439015e-01	k: 9393	n:10000
UBR4   10000 perm   3 sec   (3016 perm/sec)   p_kst 9.393000e-01   p_cons 4.185000e-01   p_joint 7.203000e-01

Outputting figure to mutsig2_images.part000000000186/UBR4.3_15976_10000_0.9393_0.4185_0.7203.png
                gene_name: UBR4
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.94 
        ci_ks_bounds_left: 0.93 
       ci_ks_bounds_right: 0.94 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.72 
     ci_joint_bounds_left: 0.71 
    ci_joint_bounds_right: 0.73 

Current progress: 40 percent done.
UBN2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.711733e-02	ci left: 5.173580e-01	ci right 5.370262e-01	k: 5272	n:10000
Cons ci ratio: 2.434755e-02	ci left: 7.127015e-01	ci right 7.303692e-01	k: 7216	n:10000
KS ci ratio: 7.039249e-02	ci left: 2.282979e-01	ci right 2.450558e-01	k: 2366	n:10000
UBN2   10000 perm   2 sec   (5302 perm/sec)   p_kst 2.366000e-01   p_cons 7.216000e-01   p_joint 5.272000e-01

Outputting figure to mutsig2_images.part000000000186/UBN2.2_4116_10000_0.2366_0.7216_0.5272.png
                gene_name: UBN2
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.72 
      ci_cons_bounds_left: 0.71 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.53 
     ci_joint_bounds_left: 0.52 
    ci_joint_bounds_right: 0.54 

Current progress: 60 percent done.
UBR1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.075338e-02	ci left: 4.706645e-01	ci right 4.903468e-01	k: 4805	n:10000
Cons ci ratio: 7.632823e-02	ci left: 2.006723e-01	ci right 2.166978e-01	k: 2086	n:10000
KS ci ratio: 1.805555e-02	ci left: 8.174085e-01	ci right 8.324018e-01	k: 8250	n:10000
UBR1   10000 perm   2 sec   (4925 perm/sec)   p_kst 8.250000e-01   p_cons 2.086000e-01   p_joint 4.805000e-01

Outputting figure to mutsig2_images.part000000000186/UBR1.2_5438_10000_0.825_0.2086_0.4805.png
                gene_name: UBR1
               theta_stop: 0.076 
                    nperm: 10000 
                     p_ks: 0.82 
        ci_ks_bounds_left: 0.82 
       ci_ks_bounds_right: 0.83 
                   p_cons: 0.21 
      ci_cons_bounds_left: 0.20 
     ci_cons_bounds_right: 0.22 
                  p_joint: 0.48 
     ci_joint_bounds_left: 0.47 
    ci_joint_bounds_right: 0.49 

Current progress: 80 percent done.
UGT2A1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.423184e-01	ci left: 2.240510e-02	ci right 2.867545e-02	k: 254	n:10000
Cons ci ratio: 5.644158e-01	ci left: 3.455366e-03	ci right 6.245157e-03	k: 47	n:10000
KS ci ratio: 6.642498e-02	ci left: 2.496437e-01	ci right 2.668973e-01	k: 2582	n:10000
UGT2A1   10000 perm   2 sec   (6399 perm/sec)   p_kst 2.582000e-01   p_cons 4.700000e-03   p_joint 2.540000e-02

Joint ci ratio: 1.945223e-01	ci left: 1.796192e-02	ci right 2.187941e-02	k: 397	n:20000
Cons ci ratio: 3.797244e-01	ci left: 4.295928e-03	ci right 6.351929e-03	k: 105	n:20000
KS ci ratio: 4.661101e-02	ci left: 2.551219e-01	ci right 2.673475e-01	k: 5224	n:20000
UGT2A1   20000 perm   4 sec   (5661 perm/sec)   p_kst 2.612000e-01   p_cons 5.250000e-03   p_joint 1.985000e-02

Joint ci ratio: 1.665351e-01	ci left: 1.662158e-02	ci right 1.967275e-02	k: 543	n:30000
Cons ci ratio: 3.160988e-01	ci left: 4.294810e-03	ci right 5.936614e-03	k: 152	n:30000
KS ci ratio: 3.808249e-02	ci left: 2.560038e-01	ci right 2.659758e-01	k: 7829	n:30000
UGT2A1   30000 perm   6 sec   (5336 perm/sec)   p_kst 2.609667e-01   p_cons 5.066667e-03   p_joint 1.810000e-02

Joint ci ratio: 1.707803e-01	ci left: 1.188895e-02	ci right 1.413257e-02	k: 519	n:40000
Cons ci ratio: 2.737508e-01	ci left: 4.402273e-03	ci right 5.821036e-03	k: 203	n:40000
KS ci ratio: 3.298685e-02	ci left: 2.566016e-01	ci right 2.652331e-01	k: 10436	n:40000
UGT2A1   40000 perm   8 sec   (5178 perm/sec)   p_kst 2.609000e-01   p_cons 5.075000e-03   p_joint 1.297500e-02

Joint ci ratio: 1.793855e-01	ci left: 8.610978e-03	ci right 1.032670e-02	k: 472	n:50000
Cons ci ratio: 2.453347e-01	ci left: 4.456955e-03	ci right 5.721555e-03	k: 253	n:50000
KS ci ratio: 2.938132e-02	ci left: 2.586671e-01	ci right 2.664004e-01	k: 13126	n:50000
UGT2A1   50000 perm   10 sec   (5041 perm/sec)   p_kst 2.625200e-01   p_cons 5.060000e-03   p_joint 9.440000e-03

Joint ci ratio: 1.680849e-01	ci left: 8.227880e-03	ci right 9.753516e-03	k: 538	n:60000
Cons ci ratio: 2.217041e-01	ci left: 4.608718e-03	ci right 5.773267e-03	k: 310	n:60000
KS ci ratio: 2.684147e-02	ci left: 2.587171e-01	ci right 2.657726e-01	k: 15734	n:60000
UGT2A1   60000 perm   12 sec   (4922 perm/sec)   p_kst 2.622333e-01   p_cons 5.166667e-03   p_joint 8.966667e-03

Joint ci ratio: 1.566038e-01	ci left: 8.176331e-03	ci right 9.579120e-03	k: 620	n:70000
Cons ci ratio: 2.060687e-01	ci left: 4.612875e-03	ci right 5.685917e-03	k: 359	n:70000
KS ci ratio: 2.479499e-02	ci left: 2.598409e-01	ci right 2.663788e-01	k: 18417	n:70000
UGT2A1   70000 perm   15 sec   (4816 perm/sec)   p_kst 2.631000e-01   p_cons 5.128571e-03   p_joint 8.857143e-03

Joint ci ratio: 1.295653e-01	ci left: 1.057907e-02	ci right 1.205669e-02	k: 904	n:80000
Cons ci ratio: 1.905446e-01	ci left: 4.760989e-03	ci right 5.775398e-03	k: 420	n:80000
KS ci ratio: 2.311769e-02	ci left: 2.613214e-01	ci right 2.674457e-01	k: 21150	n:80000
UGT2A1   80000 perm   17 sec   (4717 perm/sec)   p_kst 2.643750e-01   p_cons 5.250000e-03   p_joint 1.130000e-02

Joint ci ratio: 1.217403e-01	ci left: 1.069511e-02	ci right 1.209221e-02	k: 1024	n:90000
Cons ci ratio: 1.797665e-01	ci left: 4.783010e-03	ci right 5.738194e-03	k: 472	n:90000
KS ci ratio: 2.183104e-02	ci left: 2.608676e-01	ci right 2.666365e-01	k: 23737	n:90000
UGT2A1   90000 perm   19 sec   (4623 perm/sec)   p_kst 2.637444e-01   p_cons 5.244444e-03   p_joint 1.137778e-02

Joint ci ratio: 1.203944e-01	ci left: 9.858067e-03	ci right 1.113057e-02	k: 1048	n:100000
Cons ci ratio: 1.696604e-01	ci left: 4.859377e-03	ci right 5.769678e-03	k: 530	n:100000
KS ci ratio: 2.069186e-02	ci left: 2.613695e-01	ci right 2.668442e-01	k: 26410	n:100000
UGT2A1   100000 perm   22 sec   (4538 perm/sec)   p_kst 2.641000e-01   p_cons 5.300000e-03   p_joint 1.048000e-02

Joint ci ratio: 1.146361e-01	ci left: 9.914863e-03	ci right 1.112933e-02	k: 1156	n:110000
Cons ci ratio: 1.613627e-01	ci left: 4.905638e-03	ci right 5.775302e-03	k: 586	n:110000
KS ci ratio: 1.973219e-02	ci left: 2.614330e-01	ci right 2.666521e-01	k: 29044	n:110000
UGT2A1   110000 perm   25 sec   (4455 perm/sec)   p_kst 2.640364e-01   p_cons 5.327273e-03   p_joint 1.050909e-02

Joint ci ratio: 1.100727e-01	ci left: 9.882334e-03	ci right 1.104151e-02	k: 1254	n:120000
Cons ci ratio: 1.558898e-01	ci left: 4.832929e-03	ci right 5.657926e-03	k: 628	n:120000
KS ci ratio: 1.885795e-02	ci left: 2.622470e-01	ci right 2.672478e-01	k: 31769	n:120000
UGT2A1   120000 perm   27 sec   (4375 perm/sec)   p_kst 2.647417e-01   p_cons 5.233333e-03   p_joint 1.045000e-02

Joint ci ratio: 1.062524e-01	ci left: 9.810684e-03	ci right 1.091901e-02	k: 1346	n:130000
Cons ci ratio: 1.507127e-01	ci left: 4.786636e-03	ci right 5.574146e-03	k: 672	n:130000
KS ci ratio: 1.811688e-02	ci left: 2.623722e-01	ci right 2.671767e-01	k: 34420	n:130000
UGT2A1   130000 perm   30 sec   (4299 perm/sec)   p_kst 2.647692e-01   p_cons 5.169231e-03   p_joint 1.035385e-02

Joint ci ratio: 1.108260e-01	ci left: 8.366024e-03	ci right 9.354479e-03	k: 1239	n:140000
Cons ci ratio: 1.453079e-01	ci left: 4.795532e-03	ci right 5.553756e-03	k: 723	n:140000
KS ci ratio: 1.744179e-02	ci left: 2.628177e-01	ci right 2.674492e-01	k: 37118	n:140000
UGT2A1   140000 perm   33 sec   (4226 perm/sec)   p_kst 2.651286e-01   p_cons 5.164286e-03   p_joint 8.850000e-03

Joint ci ratio: 1.062074e-01	ci left: 8.521759e-03	ci right 9.484031e-03	k: 1349	n:150000
Cons ci ratio: 1.411802e-01	ci left: 4.752216e-03	ci right 5.480449e-03	k: 766	n:150000
KS ci ratio: 1.685624e-02	ci left: 2.627612e-01	ci right 2.672346e-01	k: 39749	n:150000
UGT2A1   150000 perm   36 sec   (4157 perm/sec)   p_kst 2.649933e-01   p_cons 5.106667e-03   p_joint 8.993333e-03

Joint ci ratio: 1.033064e-01	ci left: 8.457776e-03	ci right 9.385151e-03	k: 1426	n:160000
Cons ci ratio: 1.368766e-01	ci left: 4.750800e-03	ci right 5.454816e-03	k: 815	n:160000
KS ci ratio: 1.633566e-02	ci left: 2.624833e-01	ci right 2.668127e-01	k: 42343	n:160000
UGT2A1   160000 perm   39 sec   (4091 perm/sec)   p_kst 2.646438e-01   p_cons 5.093750e-03   p_joint 8.912500e-03

Joint ci ratio: 1.012439e-01	ci left: 8.298405e-03	ci right 9.189058e-03	k: 1485	n:170000
Cons ci ratio: 1.324830e-01	ci left: 4.783977e-03	ci right 5.468361e-03	k: 870	n:170000
KS ci ratio: 1.585188e-02	ci left: 2.624514e-01	ci right 2.666508e-01	k: 44973	n:170000
UGT2A1   170000 perm   42 sec   (4026 perm/sec)   p_kst 2.645471e-01   p_cons 5.117647e-03   p_joint 8.735294e-03

Joint ci ratio: 9.812162e-02	ci left: 8.357433e-03	ci right 9.225165e-03	k: 1581	n:180000
Cons ci ratio: 1.287669e-01	ci left: 4.792277e-03	ci right 5.457149e-03	k: 921	n:180000
KS ci ratio: 1.540603e-02	ci left: 2.624911e-01	ci right 2.665720e-01	k: 47615	n:180000
UGT2A1   180000 perm   45 sec   (3965 perm/sec)   p_kst 2.645278e-01   p_cons 5.116667e-03   p_joint 8.783333e-03

Joint ci ratio: 1.004093e-01	ci left: 7.558135e-03	ci right 8.362249e-03	k: 1511	n:190000
Cons ci ratio: 1.256719e-01	ci left: 4.774449e-03	ci right 5.419740e-03	k: 967	n:190000
KS ci ratio: 1.498830e-02	ci left: 2.627225e-01	ci right 2.666952e-01	k: 50294	n:190000
UGT2A1   190000 perm   49 sec   (3906 perm/sec)   p_kst 2.647053e-01   p_cons 5.089474e-03   p_joint 7.952632e-03

Joint ci ratio: 9.265599e-02	ci left: 8.458823e-03	ci right 9.285507e-03	k: 1773	n:200000
Cons ci ratio: 1.224866e-01	ci left: 4.782814e-03	ci right 5.411662e-03	k: 1018	n:200000
KS ci ratio: 1.460863e-02	ci left: 2.627774e-01	ci right 2.666494e-01	k: 52942	n:200000
UGT2A1   200000 perm   52 sec   (3847 perm/sec)   p_kst 2.647100e-01   p_cons 5.090000e-03   p_joint 8.865000e-03

Joint ci ratio: 9.328757e-02	ci left: 7.948947e-03	ci right 8.731382e-03	k: 1750	n:210000
Cons ci ratio: 1.195881e-01	ci left: 4.785948e-03	ci right 5.399264e-03	k: 1068	n:210000
KS ci ratio: 1.425972e-02	ci left: 2.627380e-01	ci right 2.665162e-01	k: 55571	n:210000
UGT2A1   210000 perm   55 sec   (3792 perm/sec)   p_kst 2.646238e-01   p_cons 5.085714e-03   p_joint 8.333333e-03

Joint ci ratio: 8.785477e-02	ci left: 8.574000e-03	ci right 9.366291e-03	k: 1972	n:220000
Cons ci ratio: 1.161579e-01	ci left: 4.850746e-03	ci right 5.453314e-03	k: 1132	n:220000
KS ci ratio: 1.393338e-02	ci left: 2.627394e-01	ci right 2.664304e-01	k: 58208	n:220000
UGT2A1   220000 perm   59 sec   (3737 perm/sec)   p_kst 2.645818e-01   p_cons 5.145455e-03   p_joint 8.963636e-03

Joint ci ratio: 8.862269e-02	ci left: 8.060811e-03	ci right 8.812526e-03	k: 1939	n:230000
Cons ci ratio: 1.134364e-01	ci left: 4.872112e-03	ci right 5.462204e-03	k: 1187	n:230000
KS ci ratio: 1.362055e-02	ci left: 2.629672e-01	ci right 2.665778e-01	k: 60897	n:230000
UGT2A1   230000 perm   62 sec   (3684 perm/sec)   p_kst 2.647696e-01   p_cons 5.160870e-03   p_joint 8.430435e-03

Joint ci ratio: 8.863840e-02	ci left: 7.724884e-03	ci right 8.445405e-03	k: 1939	n:240000
Cons ci ratio: 1.107633e-01	ci left: 4.904002e-03	ci right 5.483047e-03	k: 1245	n:240000
KS ci ratio: 1.334888e-02	ci left: 2.625657e-01	ci right 2.660983e-01	k: 63439	n:240000
UGT2A1   240000 perm   66 sec   (3629 perm/sec)   p_kst 2.643292e-01   p_cons 5.187500e-03   p_joint 8.079167e-03

Joint ci ratio: 8.658516e-02	ci left: 7.779748e-03	ci right 8.487727e-03	k: 2032	n:250000
Cons ci ratio: 1.082290e-01	ci left: 4.937383e-03	ci right 5.506180e-03	k: 1304	n:250000
KS ci ratio: 1.307841e-02	ci left: 2.626241e-01	ci right 2.660854e-01	k: 66088	n:250000
UGT2A1   250000 perm   70 sec   (3576 perm/sec)   p_kst 2.643520e-01   p_cons 5.216000e-03   p_joint 8.128000e-03

Joint ci ratio: 8.372057e-02	ci left: 8.011327e-03	ci right 8.715083e-03	k: 2173	n:260000
Cons ci ratio: 1.059782e-01	ci left: 4.957102e-03	ci right 5.515553e-03	k: 1360	n:260000
KS ci ratio: 1.282882e-02	ci left: 2.625251e-01	ci right 2.659186e-01	k: 68697	n:260000
UGT2A1   260000 perm   74 sec   (3523 perm/sec)   p_kst 2.642192e-01   p_cons 5.230769e-03   p_joint 8.357692e-03

Joint ci ratio: 8.220359e-02	ci left: 8.008387e-03	ci right 8.698525e-03	k: 2254	n:270000
Cons ci ratio: 1.038991e-01	ci left: 4.971864e-03	ci right 5.520320e-03	k: 1415	n:270000
KS ci ratio: 1.260741e-02	ci left: 2.619906e-01	ci right 2.653182e-01	k: 71186	n:270000
UGT2A1   270000 perm   78 sec   (3467 perm/sec)   p_kst 2.636519e-01   p_cons 5.240741e-03   p_joint 8.348148e-03

Joint ci ratio: 8.132983e-02	ci left: 7.893775e-03	ci right 8.566463e-03	k: 2303	n:280000
Cons ci ratio: 1.017987e-01	ci left: 4.999595e-03	ci right 5.539294e-03	k: 1474	n:280000
KS ci ratio: 1.236460e-02	ci left: 2.625105e-01	ci right 2.657801e-01	k: 73960	n:280000
UGT2A1   280000 perm   82 sec   (3421 perm/sec)   p_kst 2.641429e-01   p_cons 5.264286e-03   p_joint 8.225000e-03

Joint ci ratio: 8.143058e-02	ci left: 7.604640e-03	ci right 8.253528e-03	k: 2298	n:290000
Cons ci ratio: 1.001165e-01	ci left: 4.995255e-03	ci right 5.525050e-03	k: 1524	n:290000
KS ci ratio: 1.214206e-02	ci left: 2.627783e-01	ci right 2.659919e-01	k: 76671	n:290000
UGT2A1   290000 perm   86 sec   (3372 perm/sec)   p_kst 2.643828e-01   p_cons 5.255172e-03   p_joint 7.924138e-03

Joint ci ratio: 7.939623e-02	ci left: 7.739863e-03	ci right 8.383028e-03	k: 2417	n:300000
Cons ci ratio: 9.842074e-02	ci left: 5.001028e-03	ci right 5.521933e-03	k: 1577	n:300000
KS ci ratio: 1.194513e-02	ci left: 2.625730e-01	ci right 2.657316e-01	k: 79245	n:300000
UGT2A1   300000 perm   91 sec   (3312 perm/sec)   p_kst 2.641500e-01   p_cons 5.256667e-03   p_joint 8.056667e-03

Outputting figure to mutsig2_images.part000000000186/UGT2A1.2_1608_300000_0.26415_0.0052567_0.0080567.png
                gene_name: UGT2A1
               theta_stop: 0.098 
                    nperm: 300000 
                     p_ks: 0.26 
        ci_ks_bounds_left: 0.26 
       ci_ks_bounds_right: 0.27 
                   p_cons: 0.0053 
      ci_cons_bounds_left: 0.0050 
     ci_cons_bounds_right: 0.0055 
                  p_joint: 0.0081 
     ci_joint_bounds_left: 0.0077 
    ci_joint_bounds_right: 0.0084 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000186
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 186 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1546>
Subject: Job 8704408: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1546>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000187> was used as the working directory.
Started at Thu Nov 15 19:37:52 2012
Results reported at Thu Nov 15 19:40:53 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000187.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000187.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 187  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000187.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    281.66 sec.
    Max Memory :      5607 MB
    Max Swap   :      8519 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
187
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 187
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 187: processing genes 16827 - 16917
Calculating significance of each gene.
Using projection method.
16827	UMOD	1
16828	UMODL1	1
16829	UMPS	1
16830	UNC119	1
16831	UNC119B	1
16832	UNC13A	4.583696e-01
16833	UNC13B	1.477151e-01
16834	UNC13C	1
16835	UNC13D	1
16836	UNC45A	2.687336e-01
16837	UNC45B	2.792156e-01
16838	UNC50	1
In gene UNC5A the following bins exceed PROBCAP:
    THCA-GE-A2C6-TP	categ 5	N = 2419    n = 1	mu =   7.09e-08
16839	UNC5A	1.140830e-01
16840	UNC5B	2.227790e-01
16841	UNC5C	2.376299e-01
16842	UNC5CL	1
16843	UNC5D	1
16844	UNC93A	1
16845	UNC93B1	1
16846	UNG	1
16847	UNK	1
16848	UNKL	1
16849	UPB1	1
16850	UPF1	2.192952e-01
16851	UPF2	1
16852	UPF3A	1
16853	UPF3B	1
16854	UPK1A	1
16855	UPK1B	1
16856	UPK2	1
16857	UPK3A	1.074922e-02
16858	UPK3B	1
16859	UPP1	1
16860	UPP2	1
16861	UPRT	1
16862	UQCC	1
16863	UQCR10	1
16864	UQCR11	1
16865	UQCRB	1
16866	UQCRC1	1.621238e-01
16867	UQCRC2	1
16868	UQCRFS1	1
16869	UQCRH	1
16870	UQCRHL	1
16871	UQCRQ	1
16872	URB2	1
16873	URGCP	1.217035e-01
16874	URM1	1
16875	UROC1	1.056323e-01
16876	UROD	1
16877	UROS	1
16878	USE1	1
16879	USF1	1
16880	USF2	1
16881	USH1C	1
16882	USH1G	1
16883	USH2A	7.359672e-01
16884	USHBP1	1
16885	USMG5	1
16886	USO1	1
16887	USP1	1
16888	USP10	3.129578e-01
16889	USP11	1
16890	USP12	1
16891	USP13	1
16892	USP14	1
16893	USP15	1
16894	USP16	1
16895	USP17L2	1.487172e-01
16896	USP18	1
16897	USP19	1
16898	USP2	1
16899	USP20	3.150270e-01
16900	USP21	1
16901	USP22	1
16902	USP24	1
16903	USP25	1
16904	USP26	2.945803e-01
16905	USP28	1.103221e-01
16906	USP29	1
16907	USP3	1
16908	USP30	1
16909	USP31	1
16910	USP32	1
16911	USP33	1
16912	USP34	4.176620e-01
16913	USP35	1
16914	USP36	1
16915	USP37	1.233767e-01
16916	USP38	1
16917	USP39	1
Done

Running MutSig 2:
Scatter job 187: processing genes 16827 - 16917
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
UNC13B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.319896e-02	ci left: 7.318901e-01	ci right 7.491696e-01	k: 7406	n:10000
KS ci ratio: 5.976471e-02	ci left: 2.917214e-01	ci right 3.097948e-01	k: 3007	n:10000
UNC13B   10000 perm   2 sec   (4498 perm/sec)   p_kst 3.007000e-01   p_cons 7.406000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000187/UNC13B.2_4932_10000_0.3007_0.7406_1.png
                gene_name: UNC13B
               theta_stop: 0.060 
                    nperm: 10000 
                     p_ks: 0.30 
        ci_ks_bounds_left: 0.29 
       ci_ks_bounds_right: 0.31 
                   p_cons: 0.74 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.75 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
USP34
Processing conservation and coverage...
91% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.074454e-02	ci left: 6.094987e-01	ci right 6.286319e-01	k: 6191	n:10000
Cons ci ratio: 1.754394e-03	ci left: 9.970345e-01	ci right 9.988557e-01	k: 9981	n:10000
KS ci ratio: 4.934669e-02	ci left: 3.772388e-01	ci right 3.964272e-01	k: 3868	n:10000
USP34   10000 perm   3 sec   (3008 perm/sec)   p_kst 3.868000e-01   p_cons 9.981000e-01   p_joint 6.191000e-01

Outputting figure to mutsig2_images.part000000000187/USP34.2_10961_10000_0.3868_0.9981_0.6191.png
                gene_name: USP34
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.39 
        ci_ks_bounds_left: 0.38 
       ci_ks_bounds_right: 0.40 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.62 
     ci_joint_bounds_left: 0.61 
    ci_joint_bounds_right: 0.63 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000187
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 187 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1699>
Subject: Job 8704413: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1699>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000188> was used as the working directory.
Started at Thu Nov 15 19:37:52 2012
Results reported at Thu Nov 15 19:40:06 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000188.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000188.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 188  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000188.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    158.01 sec.
    Max Memory :      5552 MB
    Max Swap   :      8248 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
188
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 188
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 188: processing genes 16918 - 17007
Calculating significance of each gene.
Using projection method.
16918	USP4	1
16919	USP40	1.445578e-01
16920	USP42	1
16921	USP43	1
16922	USP44	1
16923	USP45	1
16924	USP46	1.333124e-01
16925	USP47	1
16926	USP48	1.331620e-01
16927	USP49	2.512266e-01
16928	USP5	1
16929	USP50	1
16930	USP51	2.194783e-01
16931	USP53	1
16932	USP54	1
In gene USP6 the following bins exceed PROBCAP:
    THCA-EL-A3GP-TP	categ 6	N = 4337    n = 1	mu =   1.00e-07
16933	USP6	2.484056e-01
16934	USP6NL	1
16935	USP7	1
16936	USP8	1
16937	USP9X	2.553468e-02
16938	USPL1	1
16939	UST	1
16940	UTP11L	1
In gene UTP14A the following bins exceed PROBCAP:
    THCA-DJ-A2PR-TP	categ 6	N = 2375    n = 1	mu =   1.72e-07
16941	UTP14A	2.098189e-01
16942	UTP14C	1.479420e-01
16943	UTP15	1
16944	UTP18	1
16945	UTP20	5.530729e-01
16946	UTP23	1
16947	UTP3	1.424976e-01
16948	UTP6	1
16949	UTRN	1
16950	UTS2	1
16951	UTS2D	1
16952	UTS2R	1
16953	UVRAG	1
16954	UXS1	1
16955	UXT	1
16956	VAC14	1.449665e-01
16957	VAMP1	1
16958	VAMP2	1
16959	VAMP3	5.022776e-02
16960	VAMP4	1
16961	VAMP5	1
16962	VAMP7	1
16963	VAMP8	1
16964	VANGL1	1
16965	VANGL2	1
16966	VAPA	1.049647e-01
16967	VAPB	1
16968	VARS	3.965449e-01
16969	VARS2	1
16970	VASH1	1
16971	VASH2	1
16972	VASN	1
16973	VASP	1
16974	VAT1	1
16975	VAT1L	1
16976	VAV1	1
16977	VAV2	1.162150e-01
16978	VAV3	1
16979	VAX1	1
16980	VAX2	1
16981	VBP1	1
16982	VCAM1	2.994277e-02
16983	VCAN	7.183517e-01
16984	VCL	2.791219e-01
16985	VCP	1.496175e-01
16986	VCPIP1	1
16987	VCX	1
16988	VCX2	1
16989	VCX3A	1
16990	VCX3B	1
16991	VDAC1	1.196704e-01
16992	VDAC2	1
16993	VDAC3	3.347084e-02
16994	VDR	1.443538e-01
16995	VEGFA	2.155823e-02
16996	VEGFB	1
16997	VEGFC	1
16998	VENTX	1
16999	VEPH1	1
17000/18093 17000	VEZF1	1
17001	VEZT	2.472849e-01
17002	VGF	1
17003	VGLL1	1
17004	VGLL2	1
17005	VGLL3	1.372185e-02
17006	VGLL4	1
17007	VHL	1
Done

Running MutSig 2:
Scatter job 188: processing genes 16918 - 17007
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
USP9X
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.410874e-02	ci left: 3.347852e-01	ci right 3.535056e-01	k: 3441	n:10000
KS ci ratio: 2.708704e-02	ci left: 6.675328e-01	ci right 6.859641e-01	k: 6768	n:10000
USP9X   10000 perm   3 sec   (3629 perm/sec)   p_kst 6.768000e-01   p_cons 3.441000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000188/USP9X.4_7889_10000_0.6768_0.3441_1.png
                gene_name: USP9X
               theta_stop: 0.054 
                    nperm: 10000 
                     p_ks: 0.68 
        ci_ks_bounds_left: 0.67 
       ci_ks_bounds_right: 0.69 
                   p_cons: 0.34 
      ci_cons_bounds_left: 0.33 
     ci_cons_bounds_right: 0.35 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
VCAM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 6.236713e-03	ci left: 9.721719e-01	ci right 9.783470e-01	k: 9754	n:10000
KS ci ratio: 2.261365e-02	ci left: 7.416944e-01	ci right 7.587596e-01	k: 7503	n:10000
VCAM1   10000 perm   2 sec   (5661 perm/sec)   p_kst 7.503000e-01   p_cons 9.754000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000188/VCAM1.2_2256_10000_0.7503_0.9754_1.png
                gene_name: VCAM1
               theta_stop: 0.023 
                    nperm: 10000 
                     p_ks: 0.75 
        ci_ks_bounds_left: 0.74 
       ci_ks_bounds_right: 0.76 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000188
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 188 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1646>
Subject: Job 8704415: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1646>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000189> was used as the working directory.
Started at Thu Nov 15 19:37:53 2012
Results reported at Thu Nov 15 19:43:54 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000189.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000189.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 189  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000189.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    369.58 sec.
    Max Memory :      5990 MB
    Max Swap   :      8390 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
189
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 189
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 189: processing genes 17008 - 17098
Calculating significance of each gene.
Using projection method.
17008	VHLL	1
17009	VIL1	1
17010	VILL	1
17011	VIM	1
17012	VIP	1
17013	VIPAR	6.323934e-02
17014	VIPR1	1
17015	VIPR2	1
17016	VIT	1
17017	VKORC1	1
17018	VKORC1L1	1
17019	VLDLR	1.216833e-01
17020	VMA21	1
17021	VMAC	1
17022	VMO1	8.145589e-02
17023	VN1R1	1.051962e-01
17024	VN1R2	1
17025	VN1R4	1
17026	VN1R5	9.129757e-02
17027	VNN1	1
17028	VNN2	1.751624e-01
17029	VOPP1	1
17030	VPRBP	1
17031	VPREB1	1
17032	VPREB3	1
17033	VPS11	1
17034	VPS13A	3.178498e-01
17035	VPS13B	1
17036	VPS13C	1
17037	VPS13D	4.447067e-01
17038	VPS16	1
17039	VPS18	1
17040	VPS24	1
17041	VPS25	1
17042	VPS26A	1
17043	VPS26B	1
17044	VPS28	1
17045	VPS29	1
17046	VPS33A	1
17047	VPS33B	4.458328e-02
17048	VPS35	1
17049	VPS36	1
17050	VPS37A	1
17051	VPS37B	1
17052	VPS37C	1
17053	VPS37D	1
17054	VPS39	1
17055	VPS41	1
17056	VPS45	1
17057	VPS4A	1
17058	VPS4B	1
17059	VPS52	8.610535e-03
17060	VPS53	1.488141e-01
17061	VPS54	1
17062	VPS72	1
17063	VPS8	1
17064	VRK1	1
17065	VRK2	1
17066	VRK3	1
17067	VSIG1	1
17068	VSIG10	1
17069	VSIG2	6.263131e-02
17070	VSIG4	1
17071	VSIG8	1
17072	VSNL1	1
17073	VSTM1	1
17074	VSTM2A	1
17075	VSTM2L	1
17076	VSX1	1
17077	VSX2	1
17078	VTA1	8.286600e-02
17079	VTCN1	1
In gene VTI1A the following bins exceed PROBCAP:
    THCA-EM-A1YB-TP	categ 6	N = 686     n = 1	mu =   2.41e-07
17080	VTI1A	8.835880e-02
17081	VTI1B	1
17082	VTN	1.292995e-01
17083	VWA1	1
17084	VWA2	3.702623e-02
17085	VWA3A	1
In gene VWA3B the following bins exceed PROBCAP:
    THCA-BJ-A28S-TP	categ 6	N = 3975    n = 1	mu =   2.86e-07
17086	VWA3B	3.172863e-03
17087	VWA5A	1
17088	VWC2	1
17089	VWC2L	1
17090	VWCE	1
In gene VWF the following bins exceed PROBCAP:
    THCA-EM-A22L-TP	categ 5	N = 8249    n = 1	mu =   1.34e-07
17091	VWF	5.606523e-01
17092	WAC	1
17093	WAPAL	1
17094	WARS	1
17095	WARS2	1
17096	WAS	1
17097	WASF1	1
17098	WASF2	1
Done

Running MutSig 2:
Scatter job 189: processing genes 17008 - 17098
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
VWA3B
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.201653e-02	ci left: 5.901194e-01	ci right 6.094224e-01	k: 5998	n:10000
Cons ci ratio: 8.178706e-02	ci left: 1.791047e-01	ci right 1.944782e-01	k: 1867	n:10000
KS ci ratio: 2.648848e-02	ci left: 6.773041e-01	ci right 6.955872e-01	k: 6865	n:10000
VWA3B   10000 perm   2 sec   (4237 perm/sec)   p_kst 6.865000e-01   p_cons 1.867000e-01   p_joint 5.998000e-01

Outputting figure to mutsig2_images.part000000000189/VWA3B.4_3993_10000_0.6865_0.1867_0.5998.png
                gene_name: VWA3B
               theta_stop: 0.082 
                    nperm: 10000 
                     p_ks: 0.69 
        ci_ks_bounds_left: 0.68 
       ci_ks_bounds_right: 0.70 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.60 
     ci_joint_bounds_left: 0.59 
    ci_joint_bounds_right: 0.61 

Current progress: 17 percent done.
VN1R1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.519279e-02	ci left: 3.259469e-01	ci right 3.445492e-01	k: 3352	n:10000
Cons ci ratio: 8.104105e-02	ci left: 1.818601e-01	ci right 1.973212e-01	k: 1895	n:10000
KS ci ratio: 4.312913e-02	ci left: 4.425100e-01	ci right 4.621178e-01	k: 4523	n:10000
VN1R1   10000 perm   2 sec   (6547 perm/sec)   p_kst 4.523000e-01   p_cons 1.895000e-01   p_joint 3.352000e-01

Outputting figure to mutsig2_images.part000000000189/VN1R1.2_1066_10000_0.4523_0.1895_0.3352.png
                gene_name: VN1R1
               theta_stop: 0.081 
                    nperm: 10000 
                     p_ks: 0.45 
        ci_ks_bounds_left: 0.44 
       ci_ks_bounds_right: 0.46 
                   p_cons: 0.19 
      ci_cons_bounds_left: 0.18 
     ci_cons_bounds_right: 0.20 
                  p_joint: 0.34 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.34 

Current progress: 33 percent done.
VPS13A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.439852e-01	ci left: 6.401182e-02	ci right 7.404101e-02	k: 689	n:10000
Cons ci ratio: 2.173503e-01	ci left: 2.806894e-02	ci right 3.500749e-02	k: 314	n:10000
KS ci ratio: 1.351584e-02	ci left: 8.875964e-01	ci right 8.997732e-01	k: 8938	n:10000
VPS13A   10000 perm   3 sec   (3885 perm/sec)   p_kst 8.938000e-01   p_cons 3.140000e-02   p_joint 6.890000e-02

Joint ci ratio: 1.201886e-01	ci left: 4.745718e-02	ci right 5.357434e-02	k: 1009	n:20000
Cons ci ratio: 1.577464e-01	ci left: 2.758319e-02	ci right 3.235477e-02	k: 598	n:20000
KS ci ratio: 9.485289e-03	ci left: 8.908724e-01	ci right 8.994123e-01	k: 17904	n:20000
VPS13A   20000 perm   6 sec   (3296 perm/sec)   p_kst 8.952000e-01   p_cons 2.990000e-02   p_joint 5.045000e-02

Joint ci ratio: 1.097813e-01	ci left: 3.852441e-02	ci right 4.303174e-02	k: 1222	n:30000
Cons ci ratio: 1.235472e-01	ci left: 3.045747e-02	ci right 3.450040e-02	k: 973	n:30000
KS ci ratio: 7.889368e-03	ci left: 8.880950e-01	ci right 8.951623e-01	k: 26750	n:30000
VPS13A   30000 perm   9 sec   (3205 perm/sec)   p_kst 8.916667e-01   p_cons 3.243333e-02   p_joint 4.073333e-02

Joint ci ratio: 7.444346e-02	ci left: 6.240671e-02	ci right 6.725670e-02	k: 2592	n:40000
Cons ci ratio: 1.069387e-01	ci left: 3.075941e-02	ci right 3.425889e-02	k: 1299	n:40000
KS ci ratio: 6.867259e-03	ci left: 8.875761e-01	ci right 8.937171e-01	k: 35627	n:40000
VPS13A   40000 perm   13 sec   (3178 perm/sec)   p_kst 8.906750e-01   p_cons 3.247500e-02   p_joint 6.480000e-02

Joint ci ratio: 6.616249e-02	ci left: 6.342547e-02	ci right 6.778513e-02	k: 3279	n:50000
Cons ci ratio: 9.483775e-02	ci left: 3.147091e-02	ci right 3.462361e-02	k: 1651	n:50000
KS ci ratio: 6.136982e-03	ci left: 8.880739e-01	ci right 8.935606e-01	k: 44542	n:50000
VPS13A   50000 perm   16 sec   (3147 perm/sec)   p_kst 8.908400e-01   p_cons 3.302000e-02   p_joint 6.558000e-02

Outputting figure to mutsig2_images.part000000000189/VPS13A.2_9941_50000_0.89084_0.03302_0.06558.png
                gene_name: VPS13A
               theta_stop: 0.095 
                    nperm: 50000 
                     p_ks: 0.89 
        ci_ks_bounds_left: 0.89 
       ci_ks_bounds_right: 0.89 
                   p_cons: 0.033 
      ci_cons_bounds_left: 0.031 
     ci_cons_bounds_right: 0.035 
                  p_joint: 0.066 
     ci_joint_bounds_left: 0.063 
    ci_joint_bounds_right: 0.068 

Current progress: 50 percent done.
VPS13D
Processing conservation and coverage...
74% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.313660e-01	ci left: 1.151417e-02	ci right 1.617538e-02	k: 137	n:10000
Cons ci ratio: 2.195183e-01	ci left: 2.750089e-02	ci right 3.437595e-02	k: 308	n:10000
KS ci ratio: 1.559827e-01	ci left: 5.474973e-02	ci right 6.410897e-02	k: 593	n:10000
VPS13D   10000 perm   3 sec   (3360 perm/sec)   p_kst 5.930000e-02   p_cons 3.080000e-02   p_joint 1.370000e-02

Joint ci ratio: 3.289497e-01	ci left: 5.891661e-03	ci right 8.255063e-03	k: 140	n:20000
Cons ci ratio: 1.561414e-01	ci left: 2.816027e-02	ci right 3.297749e-02	k: 610	n:20000
KS ci ratio: 1.085134e-01	ci left: 5.791700e-02	ci right 6.461125e-02	k: 1224	n:20000
VPS13D   20000 perm   6 sec   (3104 perm/sec)   p_kst 6.120000e-02   p_cons 3.050000e-02   p_joint 7.000000e-03

Joint ci ratio: 2.748756e-01	ci left: 5.808226e-03	ci right 7.689210e-03	k: 201	n:30000
Cons ci ratio: 1.275976e-01	ci left: 2.855075e-02	ci right 3.247421e-02	k: 914	n:30000
KS ci ratio: 8.968531e-02	ci left: 5.717552e-02	ci right 6.257677e-02	k: 1795	n:30000
VPS13D   30000 perm   10 sec   (3007 perm/sec)   p_kst 5.983333e-02   p_cons 3.046667e-02   p_joint 6.700000e-03

Joint ci ratio: 2.423137e-01	ci left: 5.712489e-03	ci right 7.310422e-03	k: 259	n:40000
Cons ci ratio: 1.111628e-01	ci left: 2.847158e-02	ci right 3.184708e-02	k: 1205	n:40000
KS ci ratio: 7.720245e-02	ci left: 5.820763e-02	ci right 6.290642e-02	k: 2421	n:40000
VPS13D   40000 perm   14 sec   (2942 perm/sec)   p_kst 6.052500e-02   p_cons 3.012500e-02   p_joint 6.475000e-03

Joint ci ratio: 2.047126e-01	ci left: 6.534589e-03	ci right 8.043464e-03	k: 363	n:50000
Cons ci ratio: 9.903846e-02	ci left: 2.887341e-02	ci right 3.190143e-02	k: 1518	n:50000
KS ci ratio: 6.897334e-02	ci left: 5.858324e-02	ci right 6.278794e-02	k: 3033	n:50000
VPS13D   50000 perm   17 sec   (2894 perm/sec)   p_kst 6.066000e-02   p_cons 3.036000e-02   p_joint 7.260000e-03

Joint ci ratio: 1.861907e-01	ci left: 6.650328e-03	ci right 8.031302e-03	k: 439	n:60000
Cons ci ratio: 9.022586e-02	ci left: 2.912218e-02	ci right 3.189014e-02	k: 1829	n:60000
KS ci ratio: 6.284266e-02	ci left: 5.898298e-02	ci right 6.282629e-02	k: 3653	n:60000
VPS13D   60000 perm   21 sec   (2852 perm/sec)   p_kst 6.088333e-02   p_cons 3.048333e-02   p_joint 7.316667e-03

Joint ci ratio: 1.904724e-01	ci left: 5.441317e-03	ci right 6.600205e-03	k: 420	n:70000
Cons ci ratio: 8.309246e-02	ci left: 2.953242e-02	ci right 3.210667e-02	k: 2156	n:70000
KS ci ratio: 5.807957e-02	ci left: 5.932268e-02	ci right 6.288524e-02	k: 4276	n:70000
VPS13D   70000 perm   25 sec   (2814 perm/sec)   p_kst 6.108571e-02   p_cons 3.080000e-02   p_joint 6.000000e-03

Joint ci ratio: 1.872205e-01	ci left: 4.939665e-03	ci right 5.971698e-03	k: 435	n:80000
Cons ci ratio: 7.777711e-02	ci left: 2.957675e-02	ci right 3.198244e-02	k: 2461	n:80000
KS ci ratio: 5.427531e-02	ci left: 5.954870e-02	ci right 6.288321e-02	k: 4896	n:80000
VPS13D   80000 perm   29 sec   (2780 perm/sec)   p_kst 6.120000e-02   p_cons 3.076250e-02   p_joint 5.437500e-03

Joint ci ratio: 1.973046e-01	ci left: 3.935810e-03	ci right 4.807721e-03	k: 392	n:90000
Cons ci ratio: 7.379417e-02	ci left: 2.927703e-02	ci right 3.153115e-02	k: 2735	n:90000
KS ci ratio: 5.125619e-02	ci left: 5.945599e-02	ci right 6.259460e-02	k: 5491	n:90000
VPS13D   90000 perm   33 sec   (2748 perm/sec)   p_kst 6.101111e-02   p_cons 3.038889e-02   p_joint 4.355556e-03

Joint ci ratio: 1.922573e-01	ci left: 3.741952e-03	ci right 4.547227e-03	k: 413	n:100000
Cons ci ratio: 6.994803e-02	ci left: 2.938386e-02	ci right 3.152349e-02	k: 3044	n:100000
KS ci ratio: 4.868211e-02	ci left: 5.940576e-02	ci right 6.237977e-02	k: 6088	n:100000
VPS13D   100000 perm   37 sec   (2715 perm/sec)   p_kst 6.088000e-02   p_cons 3.044000e-02   p_joint 4.130000e-03

Joint ci ratio: 1.835938e-01	ci left: 3.748311e-03	ci right 4.514561e-03	k: 453	n:110000
Cons ci ratio: 6.670827e-02	ci left: 2.942010e-02	ci right 3.145930e-02	k: 3347	n:110000
KS ci ratio: 4.637937e-02	ci left: 5.956574e-02	ci right 6.240292e-02	k: 6707	n:110000
VPS13D   110000 perm   41 sec   (2685 perm/sec)   p_kst 6.097273e-02   p_cons 3.042727e-02   p_joint 4.118182e-03

Joint ci ratio: 1.747660e-01	ci left: 3.810070e-03	ci right 4.547542e-03	k: 500	n:120000
Cons ci ratio: 6.372776e-02	ci left: 2.959169e-02	ci right 3.154775e-02	k: 3667	n:120000
KS ci ratio: 4.441075e-02	ci left: 5.961111e-02	ci right 6.232682e-02	k: 7315	n:120000
VPS13D   120000 perm   45 sec   (2656 perm/sec)   p_kst 6.095833e-02   p_cons 3.055833e-02   p_joint 4.166667e-03

Joint ci ratio: 1.692856e-01	ci left: 3.759897e-03	ci right 4.462506e-03	k: 533	n:130000
Cons ci ratio: 6.127276e-02	ci left: 2.958703e-02	ci right 3.146475e-02	k: 3967	n:130000
KS ci ratio: 4.274800e-02	ci left: 5.945366e-02	ci right 6.205828e-02	k: 7897	n:130000
VPS13D   130000 perm   49 sec   (2628 perm/sec)   p_kst 6.074615e-02   p_cons 3.051538e-02   p_joint 4.100000e-03

Joint ci ratio: 1.538735e-01	ci left: 4.259135e-03	ci right 4.975906e-03	k: 645	n:140000
Cons ci ratio: 5.900996e-02	ci left: 2.965469e-02	ci right 3.146482e-02	k: 4277	n:140000
KS ci ratio: 4.118924e-02	ci left: 5.951135e-02	ci right 6.202117e-02	k: 8506	n:140000
VPS13D   140000 perm   54 sec   (2601 perm/sec)   p_kst 6.075714e-02   p_cons 3.055000e-02   p_joint 4.607143e-03

Joint ci ratio: 1.323611e-01	ci left: 5.428406e-03	ci right 6.204216e-03	k: 871	n:150000
Cons ci ratio: 5.694866e-02	ci left: 2.974730e-02	ci right 3.149757e-02	k: 4592	n:150000
KS ci ratio: 3.985932e-02	ci left: 5.936471e-02	ci right 6.178564e-02	k: 9085	n:150000
VPS13D   150000 perm   58 sec   (2575 perm/sec)   p_kst 6.056667e-02   p_cons 3.061333e-02   p_joint 5.806667e-03

Joint ci ratio: 1.288661e-01	ci left: 5.379320e-03	ci right 6.126261e-03	k: 919	n:160000
Cons ci ratio: 5.521710e-02	ci left: 2.969364e-02	ci right 3.138593e-02	k: 4885	n:160000
KS ci ratio: 3.865040e-02	ci left: 5.923756e-02	ci right 6.157840e-02	k: 9664	n:160000
VPS13D   160000 perm   63 sec   (2550 perm/sec)   p_kst 6.040000e-02   p_cons 3.053125e-02   p_joint 5.743750e-03

Joint ci ratio: 1.442780e-01	ci left: 4.011505e-03	ci right 4.640877e-03	k: 734	n:170000
Cons ci ratio: 5.359176e-02	ci left: 2.969345e-02	ci right 3.133437e-02	k: 5186	n:170000
KS ci ratio: 3.744803e-02	ci left: 5.941789e-02	ci right 6.169124e-02	k: 10293	n:170000
VPS13D   170000 perm   67 sec   (2526 perm/sec)   p_kst 6.054706e-02   p_cons 3.050588e-02   p_joint 4.317647e-03

Joint ci ratio: 1.482993e-01	ci left: 3.579847e-03	ci right 4.158535e-03	k: 695	n:180000
Cons ci ratio: 5.213139e-02	ci left: 2.966103e-02	ci right 3.125414e-02	k: 5481	n:180000
KS ci ratio: 3.642592e-02	ci left: 5.934784e-02	ci right 6.155523e-02	k: 10880	n:180000
VPS13D   180000 perm   72 sec   (2501 perm/sec)   p_kst 6.044444e-02   p_cons 3.045000e-02   p_joint 3.861111e-03

Joint ci ratio: 1.289954e-01	ci left: 4.524731e-03	ci right 5.153681e-03	k: 918	n:190000
Cons ci ratio: 5.078877e-02	ci left: 2.962736e-02	ci right 3.117648e-02	k: 5775	n:190000
KS ci ratio: 3.549141e-02	ci left: 5.925983e-02	ci right 6.140624e-02	k: 11462	n:190000
VPS13D   190000 perm   77 sec   (2478 perm/sec)   p_kst 6.032632e-02   p_cons 3.039474e-02   p_joint 4.831579e-03

Joint ci ratio: 1.384890e-01	ci left: 3.713601e-03	ci right 4.270926e-03	k: 797	n:200000
Cons ci ratio: 4.946922e-02	ci left: 2.968646e-02	ci right 3.119719e-02	k: 6087	n:200000
KS ci ratio: 3.461919e-02	ci left: 5.920112e-02	ci right 6.129165e-02	k: 12048	n:200000
VPS13D   200000 perm   82 sec   (2454 perm/sec)   p_kst 6.024000e-02   p_cons 3.043500e-02   p_joint 3.985000e-03

Joint ci ratio: 1.223208e-01	ci left: 4.568878e-03	ci right 5.168724e-03	k: 1021	n:210000
Cons ci ratio: 4.824356e-02	ci left: 2.974511e-02	ci right 3.122027e-02	k: 6400	n:210000
KS ci ratio: 3.381966e-02	ci left: 5.911080e-02	ci right 6.114899e-02	k: 12626	n:210000
VPS13D   210000 perm   86 sec   (2431 perm/sec)   p_kst 6.012381e-02   p_cons 3.047619e-02   p_joint 4.861905e-03

Joint ci ratio: 1.188778e-01	ci left: 4.625710e-03	ci right 5.214723e-03	k: 1081	n:220000
Cons ci ratio: 4.711919e-02	ci left: 2.978087e-02	ci right 3.122245e-02	k: 6709	n:220000
KS ci ratio: 3.301991e-02	ci left: 5.920960e-02	ci right 6.120200e-02	k: 13244	n:220000
VPS13D   220000 perm   91 sec   (2409 perm/sec)   p_kst 6.020000e-02   p_cons 3.049545e-02   p_joint 4.913636e-03

Joint ci ratio: 1.225880e-01	ci left: 4.154671e-03	ci right 4.701412e-03	k: 1017	n:230000
Cons ci ratio: 4.615478e-02	ci left: 2.970640e-02	ci right 3.111416e-02	k: 6993	n:230000
KS ci ratio: 3.223723e-02	ci left: 5.942978e-02	ci right 6.138131e-02	k: 13892	n:230000
VPS13D   230000 perm   96 sec   (2387 perm/sec)   p_kst 6.040000e-02   p_cons 3.040435e-02   p_joint 4.421739e-03

Joint ci ratio: 1.201354e-01	ci left: 4.151246e-03	ci right 4.685831e-03	k: 1059	n:240000
Cons ci ratio: 4.512910e-02	ci left: 2.979090e-02	ci right 3.117047e-02	k: 7314	n:240000
KS ci ratio: 3.156896e-02	ci left: 5.941292e-02	ci right 6.132271e-02	k: 14487	n:240000
VPS13D   240000 perm   101 sec   (2365 perm/sec)   p_kst 6.036250e-02   p_cons 3.047500e-02   p_joint 4.412500e-03

Joint ci ratio: 1.211837e-01	ci left: 3.915341e-03	ci right 4.424260e-03	k: 1041	n:250000
Cons ci ratio: 4.418977e-02	ci left: 2.984125e-02	ci right 3.119366e-02	k: 7628	n:250000
KS ci ratio: 3.090899e-02	ci left: 5.951295e-02	ci right 6.138526e-02	k: 15111	n:250000
VPS13D   250000 perm   107 sec   (2344 perm/sec)   p_kst 6.044400e-02   p_cons 3.051200e-02   p_joint 4.164000e-03

Joint ci ratio: 1.192555e-01	ci left: 3.891585e-03	ci right 4.388800e-03	k: 1075	n:260000
Cons ci ratio: 4.333209e-02	ci left: 2.985376e-02	ci right 3.117981e-02	k: 7933	n:260000
KS ci ratio: 3.028874e-02	ci left: 5.960567e-02	ci right 6.144260e-02	k: 15735	n:260000
VPS13D   260000 perm   112 sec   (2322 perm/sec)   p_kst 6.051923e-02   p_cons 3.051154e-02   p_joint 4.134615e-03

Joint ci ratio: 1.173105e-01	ci left: 3.876838e-03	ci right 4.363530e-03	k: 1111	n:270000
Cons ci ratio: 4.246935e-02	ci left: 2.993888e-02	ci right 3.124159e-02	k: 8258	n:270000
KS ci ratio: 2.976351e-02	ci left: 5.946751e-02	ci right 6.126786e-02	k: 16298	n:270000
VPS13D   270000 perm   117 sec   (2303 perm/sec)   p_kst 6.036296e-02   p_cons 3.058519e-02   p_joint 4.114815e-03

Joint ci ratio: 1.150557e-01	ci left: 3.890958e-03	ci right 4.369396e-03	k: 1155	n:280000
Cons ci ratio: 4.173900e-02	ci left: 2.990150e-02	ci right 3.117967e-02	k: 8550	n:280000
KS ci ratio: 2.922412e-02	ci left: 5.949555e-02	ci right 6.126356e-02	k: 16905	n:280000
VPS13D   280000 perm   123 sec   (2282 perm/sec)   p_kst 6.037500e-02   p_cons 3.053571e-02   p_joint 4.125000e-03

Joint ci ratio: 1.094110e-01	ci left: 4.165704e-03	ci right 4.651178e-03	k: 1277	n:290000
Cons ci ratio: 4.102832e-02	ci left: 2.989077e-02	ci right 3.114622e-02	k: 8849	n:290000
KS ci ratio: 2.875237e-02	ci left: 5.936780e-02	ci right 6.110307e-02	k: 17467	n:290000
VPS13D   290000 perm   128 sec   (2263 perm/sec)   p_kst 6.023103e-02   p_cons 3.051379e-02   p_joint 4.403448e-03

Joint ci ratio: 1.100696e-01	ci left: 3.978199e-03	ci right 4.444792e-03	k: 1262	n:300000
Cons ci ratio: 4.040974e-02	ci left: 2.979842e-02	ci right 3.103068e-02	k: 9123	n:300000
KS ci ratio: 2.822619e-02	ci left: 5.955343e-02	ci right 6.126174e-02	k: 18121	n:300000
VPS13D   300000 perm   134 sec   (2243 perm/sec)   p_kst 6.040333e-02   p_cons 3.041000e-02   p_joint 4.206667e-03

Joint ci ratio: 1.081177e-01	ci left: 3.994210e-03	ci right 4.453844e-03	k: 1308	n:310000
Cons ci ratio: 3.977468e-02	ci left: 2.977605e-02	ci right 3.098759e-02	k: 9417	n:310000
KS ci ratio: 2.778147e-02	ci left: 5.950941e-02	ci right 6.118914e-02	k: 18707	n:310000
VPS13D   310000 perm   139 sec   (2224 perm/sec)   p_kst 6.034516e-02   p_cons 3.037742e-02   p_joint 4.219355e-03

Joint ci ratio: 1.013162e-01	ci left: 4.420264e-03	ci right 4.895025e-03	k: 1489	n:320000
Cons ci ratio: 3.915202e-02	ci left: 2.977999e-02	ci right 3.097229e-02	k: 9719	n:320000
KS ci ratio: 2.735335e-02	ci left: 5.948387e-02	ci right 6.113660e-02	k: 19298	n:320000
VPS13D   320000 perm   145 sec   (2204 perm/sec)   p_kst 6.030625e-02   p_cons 3.037187e-02   p_joint 4.653125e-03

Joint ci ratio: 9.988568e-02	ci left: 4.413340e-03	ci right 4.880273e-03	k: 1532	n:330000
Cons ci ratio: 3.853195e-02	ci left: 2.982285e-02	ci right 3.099754e-02	k: 10034	n:330000
KS ci ratio: 2.694804e-02	ci left: 5.944502e-02	ci right 6.107181e-02	k: 19884	n:330000
VPS13D   330000 perm   151 sec   (2185 perm/sec)   p_kst 6.025455e-02   p_cons 3.040606e-02   p_joint 4.642424e-03

Outputting figure to mutsig2_images.part000000000189/VPS13D.2_13443_330000_0.060255_0.030406_0.0046424.png
                gene_name: VPS13D
               theta_stop: 0.100 
                    nperm: 330000 
                     p_ks: 0.060 
        ci_ks_bounds_left: 0.059 
       ci_ks_bounds_right: 0.061 
                   p_cons: 0.030 
      ci_cons_bounds_left: 0.030 
     ci_cons_bounds_right: 0.031 
                  p_joint: 0.0046 
     ci_joint_bounds_left: 0.0044 
    ci_joint_bounds_right: 0.0049 

Current progress: 67 percent done.
VPS52
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.716754e-02	ci left: 6.662236e-01	ci right 6.846741e-01	k: 6755	n:10000
Cons ci ratio: 5.822401e-02	ci left: 3.027268e-01	ci right 3.209830e-01	k: 3118	n:10000
KS ci ratio: 6.958397e-02	ci left: 2.324462e-01	ci right 2.493050e-01	k: 2408	n:10000
VPS52   10000 perm   2 sec   (6077 perm/sec)   p_kst 2.408000e-01   p_cons 3.118000e-01   p_joint 6.755000e-01

Outputting figure to mutsig2_images.part000000000189/VPS52.2_2252_10000_0.2408_0.3118_0.6755.png
                gene_name: VPS52
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.30 
     ci_cons_bounds_right: 0.32 
                  p_joint: 0.68 
     ci_joint_bounds_left: 0.67 
    ci_joint_bounds_right: 0.68 

Current progress: 83 percent done.
VWA2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.449635e-02	ci left: 1.695643e-01	ci right 1.846243e-01	k: 1770	n:10000
Cons ci ratio: 4.846382e-02	ci left: 3.857986e-01	ci right 4.050623e-01	k: 3954	n:10000
KS ci ratio: 1.209147e-01	ci left: 8.932164e-02	ci right 1.009155e-01	k: 950	n:10000
VWA2   10000 perm   2 sec   (6007 perm/sec)   p_kst 9.500000e-02   p_cons 3.954000e-01   p_joint 1.770000e-01

Joint ci ratio: 4.476465e-02	ci left: 2.709049e-01	ci right 2.833599e-01	k: 5542	n:20000
Cons ci ratio: 3.304264e-02	ci left: 4.061642e-01	ci right 4.198611e-01	k: 8260	n:20000
KS ci ratio: 8.530316e-02	ci left: 9.141174e-02	ci right 9.960629e-02	k: 1909	n:20000
VWA2   20000 perm   4 sec   (5344 perm/sec)   p_kst 9.545000e-02   p_cons 4.130000e-01   p_joint 2.771000e-01

Outputting figure to mutsig2_images.part000000000189/VWA2.2_2222_20000_0.09545_0.413_0.2771.png
                gene_name: VWA2
               theta_stop: 0.085 
                    nperm: 20000 
                     p_ks: 0.095 
        ci_ks_bounds_left: 0.091 
       ci_ks_bounds_right: 0.100 
                   p_cons: 0.41 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.42 
                  p_joint: 0.28 
     ci_joint_bounds_left: 0.27 
    ci_joint_bounds_right: 0.28 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000189
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 189 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1711>
Subject: Job 8704416: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1711>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000190> was used as the working directory.
Started at Thu Nov 15 19:37:53 2012
Results reported at Thu Nov 15 19:40:28 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000190.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000190.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 190  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000190.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    181.55 sec.
    Max Memory :      5511 MB
    Max Swap   :      8349 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
190
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 190
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 190: processing genes 17099 - 17188
Calculating significance of each gene.
Using projection method.
17099	WASF3	1
17100	WASL	1
17101	WBP1	7.337796e-02
17102	WBP11	1
17103	WBP2	1
17104	WBP2NL	1
17105	WBP4	1
17106	WBP5	1
17107	WBSCR16	1
17108	WBSCR17	1
17109	WBSCR22	1
17110	WBSCR27	1
17111	WBSCR28	1
17112	WDFY1	1
17113	WDFY2	1
17114	WDFY3	5.612612e-01
17115	WDHD1	1
17116	WDR1	1
17117	WDR11	1.827123e-01
17118	WDR12	1
17119	WDR13	1
17120	WDR16	1
17121	WDR17	1
17122	WDR18	1
17123	WDR19	1
17124	WDR20	1
17125	WDR24	1
17126	WDR25	1
17127	WDR26	1
17128	WDR27	1
17129	WDR3	1
17130	WDR31	1
17131	WDR33	1.554373e-01
17132	WDR34	1
17133	WDR35	1
17134	WDR36	1
17135	WDR37	1
17136	WDR38	1
17137	WDR4	1
17138	WDR41	1
17139	WDR43	1
17140	WDR44	1
17141	WDR45	1
17142	WDR45L	1.390556e-02
17143	WDR46	1
17144	WDR47	2.648353e-01
17145	WDR48	1
17146	WDR49	2.624801e-01
17147	WDR5	1
17148	WDR52	1.516645e-02
17149	WDR53	1
17150	WDR54	1
17151	WDR55	1
17152	WDR59	8.463052e-02
17153	WDR5B	1.101814e-01
17154	WDR6	1
17155	WDR60	1
17156	WDR61	1
In gene WDR62 the following bins exceed PROBCAP:
    THCA-DJ-A13M-TP	categ 6	N = 4501    n = 1	mu =   3.35e-08
17157	WDR62	1.935853e-01
17158	WDR63	1
17159	WDR64	1
17160	WDR65	1
17161	WDR66	2.477180e-01
17162	WDR67	1
17163	WDR69	1
In gene WDR7 the following bins exceed PROBCAP:
    THCA-EM-A2CT-TP	categ 6	N = 4577    n = 1	mu =   3.35e-08
17164	WDR7	1.881964e-01
17165	WDR70	1
17166	WDR72	1
17167	WDR73	1
17168	WDR74	1
17169	WDR75	1
17170	WDR76	1
17171	WDR77	1
17172	WDR78	1.056162e-01
17173	WDR8	1.717947e-01
17174	WDR81	1
17175	WDR82	1
17176	WDR83	1
17177	WDR85	1
17178	WDR86	1
17179	WDR88	1
17180	WDR89	1
17181	WDR90	1
17182	WDR91	1
17183	WDR92	1
17184	WDR93	1
17185	WDSUB1	1
17186	WDTC1	7.154026e-02
17187	WDYHV1	1
17188	WEE1	1
Done

Running MutSig 2:
Scatter job 190: processing genes 17099 - 17188
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
WDR33
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.837199e-02	ci left: 5.007505e-01	ci right 5.204433e-01	k: 5106	n:10000
Cons ci ratio: 5.200715e-02	ci left: 3.527710e-01	ci right 3.717094e-01	k: 3622	n:10000
KS ci ratio: 2.778928e-02	ci left: 6.561554e-01	ci right 6.747481e-01	k: 6655	n:10000
WDR33   10000 perm   2 sec   (5166 perm/sec)   p_kst 6.655000e-01   p_cons 3.622000e-01   p_joint 5.106000e-01

Outputting figure to mutsig2_images.part000000000190/WDR33.2_4504_10000_0.6655_0.3622_0.5106.png
                gene_name: WDR33
               theta_stop: 0.052 
                    nperm: 10000 
                     p_ks: 0.67 
        ci_ks_bounds_left: 0.66 
       ci_ks_bounds_right: 0.67 
                   p_cons: 0.36 
      ci_cons_bounds_left: 0.35 
     ci_cons_bounds_right: 0.37 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 25 percent done.
WDR45L
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.933710e-02	ci left: 7.963859e-01	ci right 8.120365e-01	k: 8043	n:10000
Cons ci ratio: 1.309951e-02	ci left: 8.935428e-01	ci right 9.054233e-01	k: 8996	n:10000
KS ci ratio: 2.472349e-02	ci left: 7.064443e-01	ci right 7.242301e-01	k: 7154	n:10000
WDR45L   10000 perm   2 sec   (5619 perm/sec)   p_kst 7.154000e-01   p_cons 8.996000e-01   p_joint 8.043000e-01

Outputting figure to mutsig2_images.part000000000190/WDR45L.2_1075_10000_0.7154_0.8996_0.8043.png
                gene_name: WDR45L
               theta_stop: 0.025 
                    nperm: 10000 
                     p_ks: 0.72 
        ci_ks_bounds_left: 0.71 
       ci_ks_bounds_right: 0.72 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.91 
                  p_joint: 0.80 
     ci_joint_bounds_left: 0.80 
    ci_joint_bounds_right: 0.81 

Current progress: 50 percent done.
WDR52
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.125263e-02	ci left: 1.810727e-01	ci right 1.965090e-01	k: 1887	n:10000
Cons ci ratio: 8.392110e-02	ci left: 1.715307e-01	ci right 1.866567e-01	k: 1790	n:10000
KS ci ratio: 8.135889e-02	ci left: 1.806791e-01	ci right 1.961029e-01	k: 1883	n:10000
WDR52   10000 perm   2 sec   (4765 perm/sec)   p_kst 1.883000e-01   p_cons 1.790000e-01   p_joint 1.887000e-01

Outputting figure to mutsig2_images.part000000000190/WDR52.2_5716_10000_0.1883_0.179_0.1887.png
                gene_name: WDR52
               theta_stop: 0.084 
                    nperm: 10000 
                     p_ks: 0.19 
        ci_ks_bounds_left: 0.18 
       ci_ks_bounds_right: 0.20 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.17 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.19 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.20 

Current progress: 75 percent done.
WDR59
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.282482e-03	ci left: 9.859942e-01	ci right 9.903144e-01	k: 9883	n:10000
Cons ci ratio: 2.553281e-02	ci left: 6.930285e-01	ci right 7.110537e-01	k: 7021	n:10000
KS ci ratio: 8.010044e-03	ci left: 9.559730e-01	ci right 9.637562e-01	k: 9600	n:10000
WDR59   10000 perm   2 sec   (5725 perm/sec)   p_kst 9.600000e-01   p_cons 7.021000e-01   p_joint 9.883000e-01

Outputting figure to mutsig2_images.part000000000190/WDR59.2_3029_10000_0.96_0.7021_0.9883.png
                gene_name: WDR59
               theta_stop: 0.026 
                    nperm: 10000 
                     p_ks: 0.96 
        ci_ks_bounds_left: 0.96 
       ci_ks_bounds_right: 0.96 
                   p_cons: 0.70 
      ci_cons_bounds_left: 0.69 
     ci_cons_bounds_right: 0.71 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000190
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 190 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1650>
Subject: Job 8704418: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1650>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000191> was used as the working directory.
Started at Thu Nov 15 19:38:00 2012
Results reported at Thu Nov 15 19:43:18 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000191.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000191.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 191  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000191.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    351.73 sec.
    Max Memory :      5808 MB
    Max Swap   :      8551 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
191
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 191
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 191: processing genes 17189 - 17279
Calculating significance of each gene.
Using projection method.
17189	WEE2	1
17190	WFDC1	1
17191	WFDC10A	1
17192	WFDC10B	1
17193	WFDC11	1
17194	WFDC12	1
17195	WFDC13	1
17196	WFDC2	1
17197	WFDC3	5.189945e-02
17198	WFDC5	1
17199	WFDC6	1
17200	WFDC8	1
17201	WFDC9	1
17202	WFIKKN1	1
17203	WFIKKN2	9.543389e-02
17204	WFS1	1.399632e-01
In gene WHAMM the following bins exceed PROBCAP:
    THCA-EM-A22M-TP	categ 6	N = 1278    n = 1	mu =   1.03e-07
17205	WHAMM	7.231955e-02
17206	WHSC1	1
17207	WHSC1L1	5.392210e-02
17208	WHSC2	1
17209	WIBG	1
17210	WIF1	1
17211	WIPF1	2.989426e-02
17212	WIPF2	1.073145e-01
17213	WIPF3	1
17214	WIPI1	1
17215	WIPI2	1
17216	WISP1	1
17217	WISP2	1
17218	WISP3	1
17219	WIZ	1
17220	WLS	1
17221	WNK1	6.533315e-01
17222	WNK2	1.275528e-01
17223	WNK3	1
17224	WNK4	1.618111e-01
17225	WNT1	1
17226	WNT10A	1
17227	WNT10B	1
17228	WNT11	1
17229	WNT16	1
17230	WNT2	1
17231	WNT2B	1
17232	WNT3	1
17233	WNT3A	1
17234	WNT4	1.831773e-01
17235	WNT5A	1
17236	WNT5B	9.812262e-02
17237	WNT6	1
17238	WNT7A	1
17239	WNT7B	1
17240	WNT8A	1
17241	WNT8B	1
17242	WNT9A	1
17243	WNT9B	1
17244	WRAP53	1
17245	WRB	1
17246	WRN	2.363365e-01
17247	WRNIP1	1
17248	WSB1	1
17249	WSB2	1
17250	WSCD1	1.634947e-01
17251	WSCD2	1
17252	WT1	2.474784e-02
17253	WTAP	1
17254	WTIP	1
17255	WWC1	1
17256	WWC2	1
17257	WWC3	1
17258	WWOX	1
17259	WWP1	3.531855e-01
17260	WWP2	1
17261	WWTR1	1
17262	XAB2	1
17263	XAF1	1
17264	XAGE3	1
17265	XAGE5	1
17266	XBP1	1
17267	XCL1	1
17268	XCL2	1
17269	XCR1	1
17270	XDH	1
17271	XG	1
17272	XIAP	1
17273	XIRP1	1
17274	XIRP2	1
17275	XK	1
17276	XKR3	1
17277	XKR4	1
17278	XKR5	1
17279	XKR6	1
Done

Running MutSig 2:
Scatter job 191: processing genes 17189 - 17279
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
WHSC1L1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.103856e-02	ci left: 6.049788e-01	ci right 6.241544e-01	k: 6146	n:10000
KS ci ratio: 4.610433e-02	ci left: 4.098026e-01	ci right 4.292443e-01	k: 4195	n:10000
WHSC1L1   10000 perm   2 sec   (5060 perm/sec)   p_kst 4.195000e-01   p_cons 6.146000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000191/WHSC1L1.2_4493_10000_0.4195_0.6146_1.png
                gene_name: WHSC1L1
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.42 
        ci_ks_bounds_left: 0.41 
       ci_ks_bounds_right: 0.43 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 33 percent done.
WIPF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.233520e-01	ci left: 6.705543e-03	ci right 1.038936e-02	k: 84	n:10000
Cons ci ratio: 6.521239e-01	ci left: 2.439052e-03	ci right 4.864323e-03	k: 35	n:10000
KS ci ratio: 2.260159e-02	ci left: 7.418966e-01	ci right 7.589573e-01	k: 7505	n:10000
WIPF1   10000 perm   2 sec   (6150 perm/sec)   p_kst 7.505000e-01   p_cons 3.500000e-03   p_joint 8.400000e-03

Joint ci ratio: 4.055288e-01	ci left: 3.709812e-03	ci right 5.638552e-03	k: 92	n:20000
Cons ci ratio: 4.710861e-01	ci left: 2.641171e-03	ci right 4.308347e-03	k: 68	n:20000
KS ci ratio: 1.602240e-02	ci left: 7.434843e-01	ci right 7.555431e-01	k: 14991	n:20000
WIPF1   20000 perm   4 sec   (5551 perm/sec)   p_kst 7.495500e-01   p_cons 3.400000e-03   p_joint 4.600000e-03

Joint ci ratio: 2.473828e-01	ci left: 7.273253e-03	ci right 9.356987e-03	k: 248	n:30000
Cons ci ratio: 3.024883e-01	ci left: 4.725427e-03	ci right 6.439129e-03	k: 166	n:30000
KS ci ratio: 1.307588e-02	ci left: 7.447910e-01	ci right 7.546273e-01	k: 22492	n:30000
WIPF1   30000 perm   6 sec   (5324 perm/sec)   p_kst 7.497333e-01   p_cons 5.533333e-03   p_joint 8.266667e-03

Joint ci ratio: 2.442117e-01	ci left: 5.618552e-03	ci right 7.204386e-03	k: 255	n:40000
Cons ci ratio: 3.307161e-01	ci left: 2.922113e-03	ci right 4.101780e-03	k: 139	n:40000
KS ci ratio: 1.128735e-02	ci left: 7.466813e-01	ci right 7.551822e-01	k: 30038	n:40000
WIPF1   40000 perm   8 sec   (5159 perm/sec)   p_kst 7.509500e-01   p_cons 3.475000e-03   p_joint 6.375000e-03

Joint ci ratio: 2.191204e-01	ci left: 5.663077e-03	ci right 7.075155e-03	k: 317	n:50000
Cons ci ratio: 2.949577e-01	ci left: 3.001357e-03	ci right 4.057579e-03	k: 175	n:50000
KS ci ratio: 1.008520e-02	ci left: 7.475268e-01	ci right 7.551240e-01	k: 37567	n:50000
WIPF1   50000 perm   10 sec   (5026 perm/sec)   p_kst 7.513400e-01   p_cons 3.500000e-03   p_joint 6.340000e-03

Joint ci ratio: 2.012533e-01	ci left: 5.650879e-03	ci right 6.930915e-03	k: 376	n:60000
Cons ci ratio: 2.706772e-01	ci left: 3.012190e-03	ci right 3.970161e-03	k: 208	n:60000
KS ci ratio: 9.222257e-03	ci left: 7.472181e-01	ci right 7.541577e-01	k: 45042	n:60000
WIPF1   60000 perm   12 sec   (4914 perm/sec)   p_kst 7.507000e-01   p_cons 3.466667e-03   p_joint 6.266667e-03

Joint ci ratio: 1.886772e-01	ci left: 5.550207e-03	ci right 6.719871e-03	k: 428	n:70000
Cons ci ratio: 2.515494e-01	ci left: 3.022488e-03	ci right 3.905176e-03	k: 241	n:70000
KS ci ratio: 8.541413e-03	ci left: 7.473343e-01	ci right 7.537592e-01	k: 52539	n:70000
WIPF1   70000 perm   15 sec   (4805 perm/sec)   p_kst 7.505571e-01   p_cons 3.442857e-03   p_joint 6.114286e-03

Joint ci ratio: 1.767248e-01	ci left: 5.572164e-03	ci right 6.664118e-03	k: 488	n:80000
Cons ci ratio: 2.330194e-01	ci left: 3.114379e-03	ci right 3.947265e-03	k: 281	n:80000
KS ci ratio: 8.000316e-03	ci left: 7.470469e-01	ci right 7.530600e-01	k: 60005	n:80000
WIPF1   80000 perm   17 sec   (4713 perm/sec)   p_kst 7.500625e-01   p_cons 3.512500e-03   p_joint 6.100000e-03

Joint ci ratio: 1.674043e-01	ci left: 5.548468e-03	ci right 6.572650e-03	k: 544	n:90000
Cons ci ratio: 2.244462e-01	ci left: 2.998757e-03	ci right 3.767135e-03	k: 303	n:90000
KS ci ratio: 7.535759e-03	ci left: 7.475701e-01	ci right 7.532360e-01	k: 67537	n:90000
WIPF1   90000 perm   19 sec   (4622 perm/sec)   p_kst 7.504111e-01   p_cons 3.366667e-03   p_joint 6.044444e-03

Joint ci ratio: 1.630038e-01	ci left: 5.281158e-03	ci right 6.227855e-03	k: 574	n:100000
Cons ci ratio: 2.116055e-01	ci left: 3.058156e-03	ci right 3.791113e-03	k: 341	n:100000
KS ci ratio: 7.162049e-03	ci left: 7.470330e-01	ci right 7.524125e-01	k: 74973	n:100000
WIPF1   100000 perm   22 sec   (4546 perm/sec)   p_kst 7.497300e-01   p_cons 3.410000e-03   p_joint 5.740000e-03

Joint ci ratio: 1.538960e-01	ci left: 5.412227e-03	ci right 6.323213e-03	k: 644	n:110000
Cons ci ratio: 1.989131e-01	ci left: 3.168241e-03	ci right 3.876516e-03	k: 386	n:110000
KS ci ratio: 6.843354e-03	ci left: 7.463536e-01	ci right 7.514878e-01	k: 82382	n:110000
WIPF1   110000 perm   25 sec   (4465 perm/sec)   p_kst 7.489273e-01   p_cons 3.509091e-03   p_joint 5.854545e-03

Joint ci ratio: 1.458542e-01	ci left: 5.546768e-03	ci right 6.427363e-03	k: 717	n:120000
Cons ci ratio: 1.880422e-01	ci left: 3.269014e-03	ci right 3.955320e-03	k: 432	n:120000
KS ci ratio: 6.544939e-03	ci left: 7.468710e-01	ci right 7.517836e-01	k: 89920	n:120000
WIPF1   120000 perm   27 sec   (4387 perm/sec)   p_kst 7.493333e-01   p_cons 3.600000e-03   p_joint 5.975000e-03

Joint ci ratio: 1.391310e-01	ci left: 5.646803e-03	ci right 6.498532e-03	k: 788	n:130000
Cons ci ratio: 1.799129e-01	ci left: 3.311084e-03	ci right 3.972899e-03	k: 472	n:130000
KS ci ratio: 6.283840e-03	ci left: 7.472278e-01	ci right 7.519457e-01	k: 97447	n:130000
WIPF1   130000 perm   30 sec   (4311 perm/sec)   p_kst 7.495923e-01   p_cons 3.630769e-03   p_joint 6.061538e-03

Joint ci ratio: 1.341250e-01	ci left: 5.657387e-03	ci right 6.477559e-03	k: 848	n:140000
Cons ci ratio: 1.725855e-01	ci left: 3.354526e-03	ci right 3.994873e-03	k: 513	n:140000
KS ci ratio: 6.046956e-03	ci left: 7.478305e-01	ci right 7.523734e-01	k: 105015	n:140000
WIPF1   140000 perm   33 sec   (4199 perm/sec)   p_kst 7.501071e-01   p_cons 3.664286e-03   p_joint 6.057143e-03

Joint ci ratio: 1.298389e-01	ci left: 5.647680e-03	ci right 6.438263e-03	k: 905	n:150000
Cons ci ratio: 1.680734e-01	ci left: 3.309594e-03	ci right 3.923173e-03	k: 541	n:150000
KS ci ratio: 5.839741e-03	ci left: 7.480479e-01	ci right 7.524357e-01	k: 112537	n:150000
WIPF1   150000 perm   36 sec   (4111 perm/sec)   p_kst 7.502467e-01   p_cons 3.606667e-03   p_joint 6.033333e-03

Joint ci ratio: 1.261369e-01	ci left: 5.621390e-03	ci right 6.384178e-03	k: 959	n:160000
Cons ci ratio: 1.638975e-01	ci left: 3.270470e-03	ci right 3.860245e-03	k: 569	n:160000
KS ci ratio: 5.650483e-03	ci left: 7.483720e-01	ci right 7.526189e-01	k: 120080	n:160000
WIPF1   160000 perm   40 sec   (4044 perm/sec)   p_kst 7.505000e-01   p_cons 3.556250e-03   p_joint 5.993750e-03

Joint ci ratio: 1.223708e-01	ci left: 5.632693e-03	ci right 6.372541e-03	k: 1019	n:170000
Cons ci ratio: 1.588231e-01	ci left: 3.286951e-03	ci right 3.859596e-03	k: 606	n:170000
KS ci ratio: 5.476263e-03	ci left: 7.488133e-01	ci right 7.529311e-01	k: 127649	n:170000
WIPF1   170000 perm   43 sec   (3980 perm/sec)   p_kst 7.508765e-01   p_cons 3.564706e-03   p_joint 5.994118e-03

Joint ci ratio: 1.193127e-01	ci left: 5.605305e-03	ci right 6.321858e-03	k: 1072	n:180000
Cons ci ratio: 1.552854e-01	ci left: 3.253780e-03	ci right 3.806844e-03	k: 634	n:180000
KS ci ratio: 5.322585e-03	ci left: 7.488284e-01	ci right 7.528302e-01	k: 135150	n:180000
WIPF1   180000 perm   46 sec   (3921 perm/sec)   p_kst 7.508333e-01   p_cons 3.522222e-03   p_joint 5.955556e-03

Joint ci ratio: 1.165771e-01	ci left: 5.570786e-03	ci right 6.265472e-03	k: 1123	n:190000
Cons ci ratio: 1.519739e-01	ci left: 3.224228e-03	ci right 3.759518e-03	k: 662	n:190000
KS ci ratio: 5.189976e-03	ci left: 7.482048e-01	ci right 7.521033e-01	k: 142530	n:190000
WIPF1   190000 perm   49 sec   (3865 perm/sec)   p_kst 7.501579e-01   p_cons 3.484211e-03   p_joint 5.910526e-03

Joint ci ratio: 1.137297e-01	ci left: 5.569037e-03	ci right 6.245404e-03	k: 1180	n:200000
Cons ci ratio: 1.490823e-01	ci left: 3.188116e-03	ci right 3.706441e-03	k: 688	n:200000
KS ci ratio: 5.053744e-03	ci left: 7.486125e-01	ci right 7.524103e-01	k: 150103	n:200000
WIPF1   200000 perm   53 sec   (3793 perm/sec)   p_kst 7.505150e-01   p_cons 3.440000e-03   p_joint 5.900000e-03

Joint ci ratio: 1.108115e-01	ci left: 5.595425e-03	ci right 6.256420e-03	k: 1243	n:210000
Cons ci ratio: 1.464524e-01	ci left: 3.150942e-03	ci right 3.653396e-03	k: 713	n:210000
KS ci ratio: 4.930454e-03	ci left: 7.487723e-01	ci right 7.524779e-01	k: 157632	n:210000
WIPF1   210000 perm   56 sec   (3737 perm/sec)   p_kst 7.506286e-01   p_cons 3.395238e-03   p_joint 5.919048e-03

Joint ci ratio: 1.106032e-01	ci left: 5.363150e-03	ci right 5.995436e-03	k: 1248	n:220000
Cons ci ratio: 1.434706e-01	ci left: 3.139134e-03	ci right 3.628640e-03	k: 743	n:220000
KS ci ratio: 4.821440e-03	ci left: 7.484766e-01	ci right 7.520986e-01	k: 165064	n:220000
WIPF1   220000 perm   60 sec   (3684 perm/sec)   p_kst 7.502909e-01   p_cons 3.377273e-03   p_joint 5.672727e-03

Joint ci ratio: 1.077485e-01	ci left: 5.413327e-03	ci right 6.034012e-03	k: 1315	n:230000
Cons ci ratio: 1.397609e-01	ci left: 3.170405e-03	ci right 3.650940e-03	k: 783	n:230000
KS ci ratio: 4.714526e-03	ci left: 7.485911e-01	ci right 7.521330e-01	k: 172584	n:230000
WIPF1   230000 perm   63 sec   (3631 perm/sec)   p_kst 7.503652e-01   p_cons 3.404348e-03   p_joint 5.717391e-03

Joint ci ratio: 1.057597e-01	ci left: 5.390539e-03	ci right 5.996493e-03	k: 1365	n:240000
Cons ci ratio: 1.377581e-01	ci left: 3.130807e-03	ci right 3.597981e-03	k: 806	n:240000
KS ci ratio: 4.614474e-03	ci left: 7.486927e-01	ci right 7.521596e-01	k: 180103	n:240000
WIPF1   240000 perm   67 sec   (3581 perm/sec)   p_kst 7.504292e-01   p_cons 3.358333e-03   p_joint 5.687500e-03

Joint ci ratio: 1.034009e-01	ci left: 5.420330e-03	ci right 6.015217e-03	k: 1428	n:250000
Cons ci ratio: 1.347037e-01	ci left: 3.148532e-03	ci right 3.607100e-03	k: 843	n:250000
KS ci ratio: 4.525554e-03	ci left: 7.483699e-01	ci right 7.517683e-01	k: 187518	n:250000
WIPF1   250000 perm   71 sec   (3523 perm/sec)   p_kst 7.500720e-01   p_cons 3.372000e-03   p_joint 5.712000e-03

Joint ci ratio: 1.015360e-01	ci left: 5.410476e-03	ci right 5.992933e-03	k: 1481	n:260000
Cons ci ratio: 1.322210e-01	ci left: 3.146402e-03	ci right 3.595550e-03	k: 875	n:260000
KS ci ratio: 4.439570e-03	ci left: 7.482422e-01	ci right 7.515753e-01	k: 194977	n:260000
WIPF1   260000 perm   75 sec   (3478 perm/sec)   p_kst 7.499115e-01   p_cons 3.365385e-03   p_joint 5.696154e-03

Joint ci ratio: 9.954040e-02	ci left: 5.426725e-03	ci right 5.998778e-03	k: 1541	n:270000
Cons ci ratio: 1.297273e-01	ci left: 3.151669e-03	ci right 3.592431e-03	k: 909	n:270000
KS ci ratio: 4.357058e-03	ci left: 7.482323e-01	ci right 7.515031e-01	k: 202465	n:270000
WIPF1   270000 perm   79 sec   (3426 perm/sec)   p_kst 7.498704e-01   p_cons 3.366667e-03   p_joint 5.707407e-03

Joint ci ratio: 9.824573e-02	ci left: 5.375713e-03	ci right 5.934594e-03	k: 1582	n:280000
Cons ci ratio: 1.283280e-01	ci left: 3.108228e-03	ci right 3.537868e-03	k: 929	n:280000
KS ci ratio: 4.276824e-03	ci left: 7.484132e-01	ci right 7.516244e-01	k: 210006	n:280000
WIPF1   280000 perm   83 sec   (3375 perm/sec)   p_kst 7.500214e-01   p_cons 3.317857e-03   p_joint 5.650000e-03

Joint ci ratio: 9.637561e-02	ci left: 5.398937e-03	ci right 5.948944e-03	k: 1644	n:290000
Cons ci ratio: 1.255878e-01	ci left: 3.137940e-03	ci right 3.561736e-03	k: 970	n:290000
KS ci ratio: 4.203142e-03	ci left: 7.483783e-01	ci right 7.515339e-01	k: 217488	n:290000
WIPF1   290000 perm   87 sec   (3325 perm/sec)   p_kst 7.499586e-01   p_cons 3.344828e-03   p_joint 5.668966e-03

Joint ci ratio: 9.500095e-02	ci left: 5.375140e-03	ci right 5.914477e-03	k: 1692	n:300000
Cons ci ratio: 1.237543e-01	ci left: 3.126993e-03	ci right 3.542693e-03	k: 999	n:300000
KS ci ratio: 4.133950e-03	ci left: 7.482727e-01	ci right 7.513758e-01	k: 224948	n:300000
WIPF1   300000 perm   92 sec   (3272 perm/sec)   p_kst 7.498267e-01   p_cons 3.330000e-03   p_joint 5.640000e-03

Joint ci ratio: 9.336046e-02	ci left: 5.390740e-03	ci right 5.921791e-03	k: 1752	n:310000
Cons ci ratio: 1.215258e-01	ci left: 3.141817e-03	ci right 3.551425e-03	k: 1036	n:310000
KS ci ratio: 4.067366e-03	ci left: 7.482390e-01	ci right 7.512918e-01	k: 232428	n:310000
WIPF1   310000 perm   96 sec   (3235 perm/sec)   p_kst 7.497677e-01   p_cons 3.341935e-03   p_joint 5.651613e-03

Joint ci ratio: 9.294322e-02	ci left: 5.271099e-03	ci right 5.787917e-03	k: 1768	n:320000
Cons ci ratio: 1.195252e-01	ci left: 3.149713e-03	ci right 3.553113e-03	k: 1071	n:320000
KS ci ratio: 4.004399e-03	ci left: 7.481609e-01	ci right 7.511659e-01	k: 239893	n:320000
WIPF1   320000 perm   100 sec   (3199 perm/sec)   p_kst 7.496656e-01   p_cons 3.346875e-03   p_joint 5.525000e-03

Joint ci ratio: 9.058721e-02	ci left: 5.386735e-03	ci right 5.900793e-03	k: 1861	n:330000
Cons ci ratio: 1.174606e-01	ci left: 3.166008e-03	ci right 3.564004e-03	k: 1109	n:330000
KS ci ratio: 3.942707e-03	ci left: 7.482365e-01	ci right 7.511954e-01	k: 247407	n:330000
WIPF1   330000 perm   104 sec   (3162 perm/sec)   p_kst 7.497182e-01   p_cons 3.360606e-03   p_joint 5.639394e-03

Joint ci ratio: 8.946637e-02	ci left: 5.363421e-03	ci right 5.868591e-03	k: 1908	n:340000
Cons ci ratio: 1.160587e-01	ci left: 3.149981e-03	ci right 3.540913e-03	k: 1136	n:340000
KS ci ratio: 3.886552e-03	ci left: 7.480399e-01	ci right 7.509558e-01	k: 254830	n:340000
WIPF1   340000 perm   109 sec   (3127 perm/sec)   p_kst 7.495000e-01   p_cons 3.341176e-03   p_joint 5.611765e-03

Joint ci ratio: 8.840885e-02	ci left: 5.338683e-03	ci right 5.835271e-03	k: 1954	n:350000
Cons ci ratio: 1.146565e-01	ci left: 3.137672e-03	ci right 3.522053e-03	k: 1164	n:350000
KS ci ratio: 3.830102e-03	ci left: 7.481125e-01	ci right 7.509862e-01	k: 262343	n:350000
WIPF1   350000 perm   113 sec   (3093 perm/sec)   p_kst 7.495514e-01   p_cons 3.325714e-03   p_joint 5.582857e-03

Joint ci ratio: 8.701703e-02	ci left: 5.361550e-03	ci right 5.852015e-03	k: 2017	n:360000
Cons ci ratio: 1.128303e-01	ci left: 3.153068e-03	ci right 3.532774e-03	k: 1202	n:360000
KS ci ratio: 3.776993e-03	ci left: 7.480867e-01	ci right 7.509203e-01	k: 269822	n:360000
WIPF1   360000 perm   118 sec   (3056 perm/sec)   p_kst 7.495056e-01   p_cons 3.338889e-03   p_joint 5.602778e-03

Joint ci ratio: 8.544153e-02	ci left: 5.414981e-03	ci right 5.900918e-03	k: 2092	n:370000
Cons ci ratio: 1.106424e-01	ci left: 3.193958e-03	ci right 3.570643e-03	k: 1250	n:370000
KS ci ratio: 3.727536e-03	ci left: 7.479110e-01	ci right 7.507067e-01	k: 277245	n:370000
WIPF1   370000 perm   123 sec   (3014 perm/sec)   p_kst 7.493108e-01   p_cons 3.378378e-03   p_joint 5.654054e-03

Joint ci ratio: 8.438026e-02	ci left: 5.408993e-03	ci right 5.888066e-03	k: 2145	n:380000
Cons ci ratio: 1.090836e-01	ci left: 3.202041e-03	ci right 3.574017e-03	k: 1286	n:380000
KS ci ratio: 3.678758e-03	ci left: 7.478687e-01	ci right 7.506275e-01	k: 284715	n:380000
WIPF1   380000 perm   128 sec   (2977 perm/sec)   p_kst 7.492500e-01   p_cons 3.384211e-03   p_joint 5.644737e-03

Joint ci ratio: 8.305425e-02	ci left: 5.443524e-03	ci right 5.917712e-03	k: 2214	n:390000
Cons ci ratio: 1.076707e-01	ci left: 3.204754e-03	ci right 3.571917e-03	k: 1320	n:390000
KS ci ratio: 3.630408e-03	ci left: 7.479777e-01	ci right 7.507006e-01	k: 292243	n:390000
WIPF1   390000 perm   132 sec   (2945 perm/sec)   p_kst 7.493410e-01   p_cons 3.384615e-03   p_joint 5.676923e-03

Joint ci ratio: 8.272286e-02	ci left: 5.351493e-03	ci right 5.815714e-03	k: 2232	n:400000
Cons ci ratio: 1.060367e-01	ci left: 3.224397e-03	ci right 3.587855e-03	k: 1361	n:400000
KS ci ratio: 3.584989e-03	ci left: 7.479688e-01	ci right 7.506576e-01	k: 299726	n:400000
WIPF1   400000 perm   137 sec   (2912 perm/sec)   p_kst 7.493150e-01   p_cons 3.402500e-03   p_joint 5.580000e-03

Joint ci ratio: 8.174060e-02	ci left: 5.349967e-03	ci right 5.808283e-03	k: 2286	n:410000
Cons ci ratio: 1.048506e-01	ci left: 3.219368e-03	ci right 3.577950e-03	k: 1392	n:410000
KS ci ratio: 3.542176e-03	ci left: 7.478604e-01	ci right 7.505166e-01	k: 307168	n:410000
WIPF1   410000 perm   142 sec   (2880 perm/sec)   p_kst 7.491902e-01   p_cons 3.395122e-03   p_joint 5.575610e-03

Joint ci ratio: 8.086201e-02	ci left: 5.339213e-03	ci right 5.791459e-03	k: 2336	n:420000
Cons ci ratio: 1.035212e-01	ci left: 3.226198e-03	ci right 3.580707e-03	k: 1428	n:420000
KS ci ratio: 3.500083e-03	ci left: 7.478408e-01	ci right 7.504653e-01	k: 314645	n:420000
WIPF1   420000 perm   147 sec   (2849 perm/sec)   p_kst 7.491548e-01   p_cons 3.400000e-03   p_joint 5.561905e-03

Joint ci ratio: 8.007866e-02	ci left: 5.319867e-03	ci right 5.765905e-03	k: 2382	n:430000
Cons ci ratio: 1.026285e-01	ci left: 3.207809e-03	ci right 3.557075e-03	k: 1453	n:430000
KS ci ratio: 3.458793e-03	ci left: 7.478946e-01	ci right 7.504881e-01	k: 322153	n:430000
WIPF1   430000 perm   153 sec   (2819 perm/sec)   p_kst 7.491930e-01   p_cons 3.379070e-03   p_joint 5.539535e-03

Joint ci ratio: 7.918661e-02	ci left: 5.319244e-03	ci right 5.760033e-03	k: 2436	n:440000
Cons ci ratio: 1.013467e-01	ci left: 3.216851e-03	ci right 3.562467e-03	k: 1490	n:440000
KS ci ratio: 3.418889e-03	ci left: 7.479506e-01	ci right 7.505143e-01	k: 329663	n:440000
WIPF1   440000 perm   158 sec   (2790 perm/sec)   p_kst 7.492341e-01   p_cons 3.386364e-03   p_joint 5.536364e-03

Joint ci ratio: 7.835537e-02	ci left: 5.314317e-03	ci right 5.749864e-03	k: 2488	n:450000
Cons ci ratio: 1.002766e-01	ci left: 3.214684e-03	ci right 3.556204e-03	k: 1522	n:450000
KS ci ratio: 3.379975e-03	ci left: 7.480443e-01	ci right 7.505791e-01	k: 337191	n:450000
WIPF1   450000 perm   163 sec   (2761 perm/sec)   p_kst 7.493133e-01   p_cons 3.382222e-03   p_joint 5.528889e-03

Joint ci ratio: 7.748845e-02	ci left: 5.318156e-03	ci right 5.748978e-03	k: 2544	n:460000
Cons ci ratio: 9.914371e-02	ci left: 3.218989e-03	ci right 3.556879e-03	k: 1557	n:460000
KS ci ratio: 3.343598e-03	ci left: 7.479948e-01	ci right 7.505021e-01	k: 344655	n:460000
WIPF1   460000 perm   168 sec   (2734 perm/sec)   p_kst 7.492500e-01   p_cons 3.384783e-03   p_joint 5.530435e-03

Outputting figure to mutsig2_images.part000000000191/WIPF1.2_1540_460000_0.74925_0.0033848_0.0055304.png
                gene_name: WIPF1
               theta_stop: 0.099 
                    nperm: 460000 
                     p_ks: 0.75 
        ci_ks_bounds_left: 0.75 
       ci_ks_bounds_right: 0.75 
                   p_cons: 0.0034 
      ci_cons_bounds_left: 0.0032 
     ci_cons_bounds_right: 0.0036 
                  p_joint: 0.0055 
     ci_joint_bounds_left: 0.0053 
    ci_joint_bounds_right: 0.0057 

Current progress: 67 percent done.
WNK2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.293560e-02	ci left: 1.749728e-01	ci right 1.902126e-01	k: 1825	n:10000
Cons ci ratio: 9.461386e-02	ci left: 1.395251e-01	ci right 1.534815e-01	k: 1464	n:10000
KS ci ratio: 4.286896e-02	ci left: 4.455036e-01	ci right 4.651224e-01	k: 4553	n:10000
WNK2   10000 perm   2 sec   (4566 perm/sec)   p_kst 4.553000e-01   p_cons 1.464000e-01   p_joint 1.825000e-01

Outputting figure to mutsig2_images.part000000000191/WNK2.2_6770_10000_0.4553_0.1464_0.1825.png
                gene_name: WNK2
               theta_stop: 0.095 
                    nperm: 10000 
                     p_ks: 0.46 
        ci_ks_bounds_left: 0.45 
       ci_ks_bounds_right: 0.47 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.14 
     ci_cons_bounds_right: 0.15 
                  p_joint: 0.18 
     ci_joint_bounds_left: 0.17 
    ci_joint_bounds_right: 0.19 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000191
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 191 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1714>
Subject: Job 8704420: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1714>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000192> was used as the working directory.
Started at Thu Nov 15 19:38:07 2012
Results reported at Thu Nov 15 19:40:40 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000192.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000192.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 192  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000192.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    186.82 sec.
    Max Memory :      5455 MB
    Max Swap   :      8302 MB

    Max Processes  :         7
    Max Threads    :        55

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
192
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 192
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 192: processing genes 17280 - 17369
Calculating significance of each gene.
Using projection method.
17280	XKR7	1
17281	XKR8	1
17282	XKR9	1
17283	XKRX	1
17284	XPA	1
17285	XPC	1
17286	XPNPEP1	4.534927e-02
17287	XPNPEP2	1
17288	XPNPEP3	1
17289	XPO1	1
17290	XPO4	2.681357e-01
17291	XPO5	1
17292	XPO6	1
17293	XPO7	1
17294	XPOT	1
17295	XPR1	1.055575e-01
17296	XRCC1	1
17297	XRCC2	1
17298	XRCC3	1
17299	XRCC4	1
17300	XRCC5	1.895558e-02
17301	XRCC6	1.155688e-01
17302	XRCC6BP1	1
17303	XRN1	1
17304	XRN2	2.535827e-01
17305	XRRA1	1
17306	XYLB	1.514526e-01
17307	XYLT1	1
17308	XYLT2	1
17309	YAF2	1
17310	YAP1	1
17311	YARS	1
17312	YARS2	1
17313	YBX1	1
17314	YBX2	5.208365e-02
17315	YDJC	1
17316	YEATS2	4.418139e-02
17317	YEATS4	7.227534e-03
17318	YES1	2.307125e-01
17319	YIF1A	1
17320	YIF1B	1
17321	YIPF1	1
17322	YIPF2	1
17323	YIPF3	1
17324	YIPF4	1
17325	YIPF5	1
17326	YIPF6	1
17327	YIPF7	1
17328	YJEFN3	1
17329	YKT6	1
17330	YLPM1	1.328898e-01
17331	YME1L1	1.779899e-01
17332	YOD1	1
17333	YPEL1	3.466087e-02
17334	YPEL2	1
17335	YPEL3	1
17336	YPEL4	1
17337	YPEL5	1
17338	YRDC	1
In gene YSK4 the following bins exceed PROBCAP:
    THCA-ET-A25J-TP	categ 6	N = 4026    n = 1	mu =   1.02e-07
17339	YSK4	8.638856e-02
17340	YTHDC1	1.353763e-01
17341	YTHDC2	1
17342	YTHDF1	1.994698e-01
17343	YTHDF2	1
17344	YTHDF3	1
17345	YWHAB	1
17346	YWHAE	1.197322e-01
In gene YWHAG the following bins exceed PROBCAP:
    THCA-EL-A3CW-TP	categ 6	N = 752     n = 1	mu =   1.02e-07
17347	YWHAG	4.084246e-02
17348	YWHAH	1
17349	YWHAQ	1
17350	YWHAZ	1
17351	YY1	1
17352	YY1AP1	1
17353	YY2	2.165328e-02
17354	ZACN	1
17355	ZADH2	1
17356	ZAK	1
17357	ZAN	1.341149e-01
17358	ZAP70	1
17359	ZAR1	1
17360	ZBBX	8.034752e-02
17361	ZBED1	7.071620e-02
17362	ZBED2	1
17363	ZBED4	1
17364	ZBP1	1
17365	ZBTB1	1
17366	ZBTB10	1
17367	ZBTB11	1
17368	ZBTB12	1
17369	ZBTB16	1
Done

Running MutSig 2:
Scatter job 192: processing genes 17280 - 17369
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZAN
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.494822e-02	ci left: 7.027112e-01	ci right 7.205654e-01	k: 7117	n:10000
Cons ci ratio: 2.024168e-02	ci left: 7.813762e-01	ci right 7.974549e-01	k: 7895	n:10000
KS ci ratio: 5.315188e-02	ci left: 3.428323e-01	ci right 3.616539e-01	k: 3522	n:10000
ZAN   10000 perm   3 sec   (3895 perm/sec)   p_kst 3.522000e-01   p_cons 7.895000e-01   p_joint 7.117000e-01

Outputting figure to mutsig2_images.part000000000192/ZAN.4_8691_10000_0.3522_0.7895_0.7117.png
                gene_name: ZAN
               theta_stop: 0.053 
                    nperm: 10000 
                     p_ks: 0.35 
        ci_ks_bounds_left: 0.34 
       ci_ks_bounds_right: 0.36 
                   p_cons: 0.79 
      ci_cons_bounds_left: 0.78 
     ci_cons_bounds_right: 0.80 
                  p_joint: 0.71 
     ci_joint_bounds_left: 0.70 
    ci_joint_bounds_right: 0.72 

Current progress: 20 percent done.
XRCC5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.171684e-03	ci left: 9.727020e-01	ci right 9.788166e-01	k: 9759	n:10000
Cons ci ratio: 2.486315e-02	ci left: 7.041236e-01	ci right 7.219521e-01	k: 7131	n:10000
KS ci ratio: 3.438464e-02	ci left: 5.553158e-01	ci right 5.748463e-01	k: 5651	n:10000
XRCC5   10000 perm   2 sec   (6095 perm/sec)   p_kst 5.651000e-01   p_cons 7.131000e-01   p_joint 9.759000e-01

Outputting figure to mutsig2_images.part000000000192/XRCC5.2_2283_10000_0.5651_0.7131_0.9759.png
                gene_name: XRCC5
               theta_stop: 0.034 
                    nperm: 10000 
                     p_ks: 0.57 
        ci_ks_bounds_left: 0.56 
       ci_ks_bounds_right: 0.57 
                   p_cons: 0.71 
      ci_cons_bounds_left: 0.70 
     ci_cons_bounds_right: 0.72 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.97 
    ci_joint_bounds_right: 0.98 

Current progress: 40 percent done.
YEATS2
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.785521e-02	ci left: 8.206616e-01	ci right 8.355467e-01	k: 8282	n:10000
Cons ci ratio: 3.400848e-02	ci left: 5.607287e-01	ci right 5.802302e-01	k: 5705	n:10000
KS ci ratio: 2.430514e-02	ci left: 7.134081e-01	ci right 7.310622e-01	k: 7223	n:10000
YEATS2   10000 perm   2 sec   (5335 perm/sec)   p_kst 7.223000e-01   p_cons 5.705000e-01   p_joint 8.282000e-01

Outputting figure to mutsig2_images.part000000000192/YEATS2.2_4389_10000_0.7223_0.5705_0.8282.png
                gene_name: YEATS2
               theta_stop: 0.034 
                    nperm: 10000 
                     p_ks: 0.72 
        ci_ks_bounds_left: 0.71 
       ci_ks_bounds_right: 0.73 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.83 
     ci_joint_bounds_left: 0.82 
    ci_joint_bounds_right: 0.84 

Current progress: 60 percent done.
YLPM1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.113168e-03	ci left: 9.442976e-01	ci right 9.530386e-01	k: 9488	n:10000
Cons ci ratio: 1.319350e-02	ci left: 8.922095e-01	ci right 9.041574e-01	k: 8983	n:10000
KS ci ratio: 1.577252e-02	ci left: 8.537584e-01	ci right 8.674308e-01	k: 8607	n:10000
YLPM1   10000 perm   2 sec   (4785 perm/sec)   p_kst 8.607000e-01   p_cons 8.983000e-01   p_joint 9.488000e-01

Outputting figure to mutsig2_images.part000000000192/YLPM1.2_6521_10000_0.8607_0.8983_0.9488.png
                gene_name: YLPM1
               theta_stop: 0.016 
                    nperm: 10000 
                     p_ks: 0.86 
        ci_ks_bounds_left: 0.85 
       ci_ks_bounds_right: 0.87 
                   p_cons: 0.90 
      ci_cons_bounds_left: 0.89 
     ci_cons_bounds_right: 0.90 
                  p_joint: 0.95 
     ci_joint_bounds_left: 0.94 
    ci_joint_bounds_right: 0.95 

Current progress: 80 percent done.
YSK4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.545513e-02	ci left: 1.373691e-01	ci right 1.512388e-01	k: 1442	n:10000
Cons ci ratio: 9.888455e-02	ci left: 1.290445e-01	ci right 1.425684e-01	k: 1357	n:10000
KS ci ratio: 5.048895e-02	ci left: 3.664936e-01	ci right 3.855787e-01	k: 3760	n:10000
YSK4   10000 perm   2 sec   (5436 perm/sec)   p_kst 3.760000e-01   p_cons 1.357000e-01   p_joint 1.442000e-01

Outputting figure to mutsig2_images.part000000000192/YSK4.2_4027_10000_0.376_0.1357_0.1442.png
                gene_name: YSK4
               theta_stop: 0.099 
                    nperm: 10000 
                     p_ks: 0.38 
        ci_ks_bounds_left: 0.37 
       ci_ks_bounds_right: 0.39 
                   p_cons: 0.14 
      ci_cons_bounds_left: 0.13 
     ci_cons_bounds_right: 0.14 
                  p_joint: 0.14 
     ci_joint_bounds_left: 0.14 
    ci_joint_bounds_right: 0.15 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000192
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 192 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1712>
Subject: Job 8704421: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1712>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000193> was used as the working directory.
Started at Thu Nov 15 19:38:14 2012
Results reported at Thu Nov 15 19:40:52 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000193.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000193.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 193  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000193.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    162.21 sec.
    Max Memory :      6029 MB
    Max Swap   :      8452 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
193
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 193
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 193: processing genes 17370 - 17460
Calculating significance of each gene.
Using projection method.
17370	ZBTB17	1
17371	ZBTB2	1.359709e-01
17372	ZBTB20	1
17373	ZBTB22	4.323165e-04
17374	ZBTB24	1.571252e-01
17375	ZBTB25	1
17376	ZBTB26	1
17377	ZBTB3	1
17378	ZBTB32	4.904923e-02
17379	ZBTB33	1
17380	ZBTB34	1
17381	ZBTB37	1
17382	ZBTB38	1
17383	ZBTB39	1.354230e-01
17384	ZBTB4	1
17385	ZBTB40	3.875271e-01
17386	ZBTB41	1
17387	ZBTB43	1
17388	ZBTB44	1
17389	ZBTB45	1
17390	ZBTB46	2.351263e-01
17391	ZBTB47	1
17392	ZBTB48	1
17393	ZBTB49	1.527447e-01
17394	ZBTB5	1
17395	ZBTB6	1
17396	ZBTB7A	1
17397	ZBTB7B	1
17398	ZBTB7C	1
17399	ZBTB8A	1
17400	ZBTB8OS	1
17401	ZBTB9	1
17402	ZC3H10	1
17403	ZC3H11A	3.953146e-02
17404	ZC3H12A	1
17405	ZC3H12B	1.303972e-01
17406	ZC3H12C	2.693165e-01
17407	ZC3H12D	1
17408	ZC3H13	9.616045e-02
17409	ZC3H14	1
17410	ZC3H15	1
17411	ZC3H18	3.309047e-01
17412	ZC3H3	2.363602e-01
17413	ZC3H4	1.204168e-02
17414	ZC3H6	1
17415	ZC3H7A	1
17416	ZC3H7B	1
17417	ZC3H8	1
17418	ZC3HAV1	1
17419	ZC3HAV1L	1
17420	ZC3HC1	1
17421	ZC4H2	1
17422	ZCCHC10	1
17423	ZCCHC11	1
17424	ZCCHC12	1
17425	ZCCHC13	1
17426	ZCCHC14	1
17427	ZCCHC16	7.507922e-02
17428	ZCCHC17	1
17429	ZCCHC18	1
17430	ZCCHC2	1
17431	ZCCHC24	1
17432	ZCCHC3	1
17433	ZCCHC4	1
17434	ZCCHC5	1
17435	ZCCHC6	1
17436	ZCCHC7	1
17437	ZCCHC8	1
17438	ZCCHC9	1
17439	ZCRB1	1
17440	ZCWPW1	7.588904e-02
17441	ZCWPW2	1
17442	ZDBF2	2.886525e-01
17443	ZDHHC1	1
17444	ZDHHC11	1
17445	ZDHHC12	1
17446	ZDHHC13	1
17447	ZDHHC14	1
17448	ZDHHC15	1
17449	ZDHHC16	1
17450	ZDHHC17	1
17451	ZDHHC18	1
17452	ZDHHC19	1
17453	ZDHHC2	1
17454	ZDHHC20	1
17455	ZDHHC21	1
17456	ZDHHC22	1
17457	ZDHHC23	1
17458	ZDHHC24	1
17459	ZDHHC3	1
17460	ZDHHC4	1
Done

Running MutSig 2:
Scatter job 193: processing genes 17370 - 17460
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZBTB22
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.871795e-02	ci left: 1.908194e-01	ci right 2.065565e-01	k: 1986	n:10000
Cons ci ratio: 3.356648e-02	ci left: 5.671455e-01	ci right 5.866096e-01	k: 5769	n:10000
KS ci ratio: 1.181872e-01	ci left: 9.321372e-02	ci right 1.050210e-01	k: 990	n:10000
ZBTB22   10000 perm   2 sec   (4582 perm/sec)   p_kst 9.900000e-02   p_cons 5.769000e-01   p_joint 1.986000e-01

Joint ci ratio: 5.753019e-02	ci left: 1.829518e-01	ci right 1.938389e-01	k: 3767	n:20000
Cons ci ratio: 2.276314e-02	ci left: 5.903640e-01	ci right 6.040078e-01	k: 11944	n:20000
KS ci ratio: 8.352586e-02	ci left: 9.504152e-02	ci right 1.033754e-01	k: 1983	n:20000
ZBTB22   20000 perm   7 sec   (3051 perm/sec)   p_kst 9.915000e-02   p_cons 5.972000e-01   p_joint 1.883500e-01

Outputting figure to mutsig2_images.part000000000193/ZBTB22.4_1909_20000_0.09915_0.5972_0.18835.png
                gene_name: ZBTB22
               theta_stop: 0.084 
                    nperm: 20000 
                     p_ks: 0.099 
        ci_ks_bounds_left: 0.095 
       ci_ks_bounds_right: 0.10 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.60 
                  p_joint: 0.19 
     ci_joint_bounds_left: 0.18 
    ci_joint_bounds_right: 0.19 

Current progress: 20 percent done.
ZC3H4
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 3.219686e-02	ci left: 5.874096e-01	ci right 6.067338e-01	k: 5971	n:10000
KS ci ratio: 1.573306e-02	ci left: 8.543705e-01	ci right 8.680184e-01	k: 8613	n:10000
ZC3H4   10000 perm   2 sec   (5117 perm/sec)   p_kst 8.613000e-01   p_cons 5.971000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000193/ZC3H4.3_3968_10000_0.8613_0.5971_1.png
                gene_name: ZC3H4
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.86 
        ci_ks_bounds_left: 0.85 
       ci_ks_bounds_right: 0.87 
                   p_cons: 0.60 
      ci_cons_bounds_left: 0.59 
     ci_cons_bounds_right: 0.61 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 40 percent done.
ZBTB24
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.852581e-02	ci left: 4.987503e-01	ci right 5.184447e-01	k: 5086	n:10000
Cons ci ratio: 8.646081e-02	ci left: 1.630776e-01	ci right 1.779148e-01	k: 1704	n:10000
KS ci ratio: 3.347034e-02	ci left: 5.685494e-01	ci right 5.880049e-01	k: 5783	n:10000
ZBTB24   10000 perm   2 sec   (6076 perm/sec)   p_kst 5.783000e-01   p_cons 1.704000e-01   p_joint 5.086000e-01

Outputting figure to mutsig2_images.part000000000193/ZBTB24.2_2168_10000_0.5783_0.1704_0.5086.png
                gene_name: ZBTB24
               theta_stop: 0.086 
                    nperm: 10000 
                     p_ks: 0.58 
        ci_ks_bounds_left: 0.57 
       ci_ks_bounds_right: 0.59 
                   p_cons: 0.17 
      ci_cons_bounds_left: 0.16 
     ci_cons_bounds_right: 0.18 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 60 percent done.
ZC3H11A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.721712e-02	ci left: 6.654179e-01	ci right 6.838802e-01	k: 6747	n:10000
Cons ci ratio: 4.577464e-02	ci left: 4.132907e-01	ci right 4.327542e-01	k: 4230	n:10000
KS ci ratio: 3.932758e-02	ci left: 4.884519e-01	ci right 5.081491e-01	k: 4983	n:10000
ZC3H11A   10000 perm   2 sec   (5810 perm/sec)   p_kst 4.983000e-01   p_cons 4.230000e-01   p_joint 6.747000e-01

Outputting figure to mutsig2_images.part000000000193/ZC3H11A.2_2497_10000_0.4983_0.423_0.6747.png
                gene_name: ZC3H11A
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.50 
        ci_ks_bounds_left: 0.49 
       ci_ks_bounds_right: 0.51 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.67 
     ci_joint_bounds_left: 0.67 
    ci_joint_bounds_right: 0.68 

Current progress: 80 percent done.
ZC3H13
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.397447e-02	ci left: 4.329326e-01	ci right 4.525008e-01	k: 4427	n:10000
Cons ci ratio: 4.264498e-02	ci left: 4.480984e-01	ci right 4.677261e-01	k: 4579	n:10000
KS ci ratio: 4.709308e-02	ci left: 3.995407e-01	ci right 4.189122e-01	k: 4092	n:10000
ZC3H13   10000 perm   2 sec   (5136 perm/sec)   p_kst 4.092000e-01   p_cons 4.579000e-01   p_joint 4.427000e-01

Outputting figure to mutsig2_images.part000000000193/ZC3H13.2_4759_10000_0.4092_0.4579_0.4427.png
                gene_name: ZC3H13
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.46 
      ci_cons_bounds_left: 0.45 
     ci_cons_bounds_right: 0.47 
                  p_joint: 0.44 
     ci_joint_bounds_left: 0.43 
    ci_joint_bounds_right: 0.45 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000193
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 193 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1654>
Subject: Job 8704423: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1654>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000194> was used as the working directory.
Started at Thu Nov 15 19:38:14 2012
Results reported at Thu Nov 15 19:41:21 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000194.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000194.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 194  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000194.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    208.55 sec.
    Max Memory :      5944 MB
    Max Swap   :      8384 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
194
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 194
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 194: processing genes 17461 - 17550
Calculating significance of each gene.
Using projection method.
17461	ZDHHC5	1
17462	ZDHHC6	1
17463	ZDHHC7	1
17464	ZDHHC8	7.478086e-02
17465	ZDHHC9	1
17466	ZEB1	1
17467	ZEB2	1
17468	ZER1	2.743681e-01
17469	ZFAND1	7.663826e-02
17470	ZFAND2A	1
17471	ZFAND2B	1
17472	ZFAND3	7.827451e-02
In gene ZFAND5 the following bins exceed PROBCAP:
    THCA-DJ-A13U-TP	categ 5	N = 662     n = 1	mu =   2.35e-07
17473	ZFAND5	4.049688e-03
17474	ZFAND6	1
17475	ZFAT	1
17476	ZFC3H1	1
In gene ZFHX3 the following bins exceed PROBCAP:
    THCA-EM-A2P0-TP	categ 5	N = 11148   n = 1	mu =   1.66e-07
    THCA-EL-A3CL-TP	categ 6	N = 11125   n = 1	mu =   1.03e-07
17477	ZFHX3	1.467141e-03
17478	ZFHX4	4.878957e-01
17479	ZFP1	1
17480	ZFP106	1.844276e-01
17481	ZFP112	1
17482	ZFP14	1
17483	ZFP161	1
17484	ZFP2	1
17485	ZFP28	1
17486	ZFP3	1
17487	ZFP30	1
17488	ZFP36	9.180245e-02
17489	ZFP36L1	1
17490	ZFP36L2	1
17491	ZFP37	1
17492	ZFP41	1
17493	ZFP42	1
17494	ZFP57	1
17495	ZFP64	1
17496	ZFP82	1
17497	ZFP90	4.480243e-02
17498	ZFP91	1
17499	ZFPL1	1
17500	ZFPM1	1.908036e-01
17501	ZFPM2	1
17502	ZFR	1
17503	ZFR2	1
17504	ZFX	1
17505	ZFYVE1	1
17506	ZFYVE16	2.013328e-01
17507	ZFYVE19	1
17508	ZFYVE20	1
17509	ZFYVE21	1
17510	ZFYVE26	4.987212e-01
17511	ZFYVE27	1
17512	ZFYVE28	1
17513	ZFYVE9	1
17514	ZG16B	1
17515	ZGLP1	1
17516	ZGPAT	7.547554e-02
17517	ZHX1	1
17518	ZHX2	1
17519	ZHX3	1
17520	ZIC1	1
17521	ZIC2	6.840696e-02
17522	ZIC3	1.548644e-01
17523	ZIC4	1
17524	ZIC5	1
17525	ZIK1	1.109605e-01
17526	ZIM2	1
17527	ZIM3	1
17528	ZKSCAN1	1
17529	ZKSCAN2	1
17530	ZKSCAN3	6.140265e-02
17531	ZKSCAN4	1
17532	ZKSCAN5	1
17533	ZMAT1	3.257748e-02
17534	ZMAT2	1
17535	ZMAT3	1
17536	ZMAT4	1
17537	ZMAT5	1
17538	ZMIZ1	2.225137e-02
17539	ZMIZ2	1.560373e-01
17540	ZMPSTE24	1
17541	ZMYM1	1.820836e-01
17542	ZMYM2	1
17543	ZMYM3	1
17544	ZMYM4	3.870601e-01
17545	ZMYM5	1
17546	ZMYM6	1
17547	ZMYND10	1
17548	ZMYND11	1
17549	ZMYND12	1
17550	ZMYND15	1
Done

Running MutSig 2:
Scatter job 194: processing genes 17461 - 17550
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZFHX3
Processing conservation and coverage...
89% 
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.969557e-01	ci left: 3.433772e-02	ci right 4.193438e-02	k: 380	n:10000
Cons ci ratio: 9.038799e-02	ci left: 1.510978e-01	ci right 1.655018e-01	k: 1582	n:10000
KS ci ratio: 1.714031e-01	ci left: 4.542628e-02	ci right 5.403844e-02	k: 496	n:10000
ZFHX3   10000 perm   3 sec   (3203 perm/sec)   p_kst 4.960000e-02   p_cons 1.582000e-01   p_joint 3.800000e-02

Joint ci ratio: 1.122195e-01	ci left: 5.426451e-02	ci right 6.076488e-02	k: 1149	n:20000
Cons ci ratio: 6.399903e-02	ci left: 1.528713e-01	ci right 1.630283e-01	k: 3158	n:20000
KS ci ratio: 1.231045e-01	ci left: 4.527241e-02	ci right 5.125980e-02	k: 964	n:20000
ZFHX3   20000 perm   8 sec   (2367 perm/sec)   p_kst 4.820000e-02   p_cons 1.579000e-01   p_joint 5.745000e-02

Joint ci ratio: 9.934885e-02	ci left: 4.687726e-02	ci right 5.181048e-02	k: 1479	n:30000
Cons ci ratio: 5.337327e-02	ci left: 1.483172e-01	ci right 1.564836e-01	k: 4571	n:30000
KS ci ratio: 9.868433e-02	ci left: 4.749567e-02	ci right 5.245861e-02	k: 1498	n:30000
ZFHX3   30000 perm   12 sec   (2522 perm/sec)   p_kst 4.993333e-02   p_cons 1.523667e-01   p_joint 4.930000e-02

Outputting figure to mutsig2_images.part000000000194/ZFHX3.8_11148_30000_0.049933_0.15237_0.0493.png
                gene_name: ZFHX3
               theta_stop: 0.099 
                    nperm: 30000 
                     p_ks: 0.050 
        ci_ks_bounds_left: 0.047 
       ci_ks_bounds_right: 0.052 
                   p_cons: 0.15 
      ci_cons_bounds_left: 0.15 
     ci_cons_bounds_right: 0.16 
                  p_joint: 0.049 
     ci_joint_bounds_left: 0.047 
    ci_joint_bounds_right: 0.052 

Current progress: 20 percent done.
ZMIZ1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.572823e-02	ci left: 6.898019e-01	ci right 7.078821e-01	k: 6989	n:10000
Cons ci ratio: 1.146199e-02	ci left: 9.158488e-01	ci right 9.265043e-01	k: 9213	n:10000
KS ci ratio: 4.518891e-02	ci left: 4.195704e-01	ci right 4.390708e-01	k: 4293	n:10000
ZMIZ1   10000 perm   2 sec   (5520 perm/sec)   p_kst 4.293000e-01   p_cons 9.213000e-01   p_joint 6.989000e-01

Outputting figure to mutsig2_images.part000000000194/ZMIZ1.3_3288_10000_0.4293_0.9213_0.6989.png
                gene_name: ZMIZ1
               theta_stop: 0.045 
                    nperm: 10000 
                     p_ks: 0.43 
        ci_ks_bounds_left: 0.42 
       ci_ks_bounds_right: 0.44 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.93 
                  p_joint: 0.70 
     ci_joint_bounds_left: 0.69 
    ci_joint_bounds_right: 0.71 

Current progress: 40 percent done.
ZFAND5
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.898779e-03	ci left: 9.881795e-01	ci right 9.921271e-01	k: 9903	n:10000
Cons ci ratio: 1.710368e-02	ci left: 8.327676e-01	ci right 8.472337e-01	k: 8401	n:10000
KS ci ratio: 4.738645e-02	ci left: 3.965527e-01	ci right 4.159020e-01	k: 4062	n:10000
ZFAND5   10000 perm   1 sec   (7102 perm/sec)   p_kst 4.062000e-01   p_cons 8.401000e-01   p_joint 9.903000e-01

Outputting figure to mutsig2_images.part000000000194/ZFAND5.2_662_10000_0.4062_0.8401_0.9903.png
                gene_name: ZFAND5
               theta_stop: 0.047 
                    nperm: 10000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.40 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.84 
      ci_cons_bounds_left: 0.83 
     ci_cons_bounds_right: 0.85 
                  p_joint: 0.99 
     ci_joint_bounds_left: 0.99 
    ci_joint_bounds_right: 0.99 

Current progress: 60 percent done.
ZFP106
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.524235e-02	ci left: 3.255497e-01	ci right 3.441466e-01	k: 3348	n:10000
Cons ci ratio: 5.895076e-02	ci left: 2.974712e-01	ci right 3.156416e-01	k: 3065	n:10000
KS ci ratio: 3.328544e-02	ci left: 5.712572e-01	ci right 5.906956e-01	k: 5810	n:10000
ZFP106   10000 perm   2 sec   (4975 perm/sec)   p_kst 5.810000e-01   p_cons 3.065000e-01   p_joint 3.348000e-01

Outputting figure to mutsig2_images.part000000000194/ZFP106.2_5728_10000_0.581_0.3065_0.3348.png
                gene_name: ZFP106
               theta_stop: 0.059 
                    nperm: 10000 
                     p_ks: 0.58 
        ci_ks_bounds_left: 0.57 
       ci_ks_bounds_right: 0.59 
                   p_cons: 0.31 
      ci_cons_bounds_left: 0.30 
     ci_cons_bounds_right: 0.32 
                  p_joint: 0.33 
     ci_joint_bounds_left: 0.33 
    ci_joint_bounds_right: 0.34 

Current progress: 80 percent done.
ZIK1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.434992e-02	ci left: 1.402112e-01	ci right 1.541950e-01	k: 1471	n:10000
Cons ci ratio: 2.208266e-02	ci left: 7.505939e-01	ci right 7.674550e-01	k: 7591	n:10000
KS ci ratio: 4.090336e-01	ci left: 7.243098e-03	ci right 1.105110e-02	k: 90	n:10000
ZIK1   10000 perm   1 sec   (6990 perm/sec)   p_kst 9.000000e-03   p_cons 7.591000e-01   p_joint 1.471000e-01

Joint ci ratio: 3.134112e-02	ci left: 4.319568e-01	ci right 4.457610e-01	k: 8777	n:20000
Cons ci ratio: 1.550600e-02	ci left: 7.556822e-01	ci right 7.675416e-01	k: 15233	n:20000
KS ci ratio: 2.815335e-01	ci left: 8.248793e-03	ci right 1.099660e-02	k: 191	n:20000
ZIK1   20000 perm   3 sec   (6132 perm/sec)   p_kst 9.550000e-03   p_cons 7.616500e-01   p_joint 4.388500e-01

Joint ci ratio: 2.871556e-02	ci left: 3.776270e-01	ci right 3.886623e-01	k: 11494	n:30000
Cons ci ratio: 1.367314e-02	ci left: 7.275525e-01	ci right 7.376024e-01	k: 21978	n:30000
KS ci ratio: 2.255632e-01	ci left: 8.842131e-03	ci right 1.112094e-02	k: 298	n:30000
ZIK1   30000 perm   5 sec   (5810 perm/sec)   p_kst 9.933333e-03   p_cons 7.326000e-01   p_joint 3.831333e-01

Joint ci ratio: 2.106924e-02	ci left: 4.590031e-01	ci right 4.688021e-01	k: 18556	n:40000
Cons ci ratio: 1.190630e-02	ci left: 7.260724e-01	ci right 7.347941e-01	k: 29218	n:40000
KS ci ratio: 1.935541e-01	ci left: 9.167106e-03	ci right 1.115497e-02	k: 405	n:40000
ZIK1   40000 perm   7 sec   (5602 perm/sec)   p_kst 1.012500e-02   p_cons 7.304500e-01   p_joint 4.639000e-01

Joint ci ratio: 1.662655e-02	ci left: 5.220521e-01	ci right 5.308248e-01	k: 26322	n:50000
Cons ci ratio: 1.067449e-02	ci left: 7.256032e-01	ci right 7.334102e-01	k: 36476	n:50000
KS ci ratio: 1.715061e-01	ci left: 9.452689e-03	ci right 1.124484e-02	k: 516	n:50000
ZIK1   50000 perm   9 sec   (5443 perm/sec)   p_kst 1.032000e-02   p_cons 7.295200e-01   p_joint 5.264400e-01

Joint ci ratio: 1.516244e-02	ci left: 5.229455e-01	ci right 5.309519e-01	k: 31617	n:60000
Cons ci ratio: 9.729300e-03	ci left: 7.265621e-01	ci right 7.336823e-01	k: 43808	n:60000
KS ci ratio: 1.558540e-01	ci left: 9.619695e-03	ci right 1.126151e-02	k: 625	n:60000
ZIK1   60000 perm   11 sec   (5305 perm/sec)   p_kst 1.041667e-02   p_cons 7.301333e-01   p_joint 5.269500e-01

Joint ci ratio: 1.402709e-02	ci left: 5.236219e-01	ci right 5.310330e-01	k: 36913	n:70000
Cons ci ratio: 9.008677e-03	ci left: 7.267806e-01	ci right 7.333718e-01	k: 51106	n:70000
KS ci ratio: 1.444262e-01	ci left: 9.661677e-03	ci right 1.117932e-02	k: 728	n:70000
ZIK1   70000 perm   13 sec   (5187 perm/sec)   p_kst 1.040000e-02   p_cons 7.300857e-01   p_joint 5.273286e-01

Joint ci ratio: 1.674686e-02	ci left: 4.030686e-01	ci right 4.098882e-01	k: 32518	n:80000
Cons ci ratio: 8.425743e-03	ci left: 7.270470e-01	ci right 7.332113e-01	k: 58411	n:80000
KS ci ratio: 1.358537e-01	ci left: 9.599835e-03	ci right 1.101102e-02	k: 823	n:80000
ZIK1   80000 perm   16 sec   (5077 perm/sec)   p_kst 1.028750e-02   p_cons 7.301375e-01   p_joint 4.064750e-01

Joint ci ratio: 1.335328e-02	ci left: 4.858734e-01	ci right 4.924161e-01	k: 44023	n:90000
Cons ci ratio: 7.943506e-03	ci left: 7.272427e-01	ci right 7.330536e-01	k: 65714	n:90000
KS ci ratio: 1.267779e-01	ci left: 9.844327e-03	ci right 1.118750e-02	k: 945	n:90000
ZIK1   90000 perm   18 sec   (4970 perm/sec)   p_kst 1.050000e-02   p_cons 7.301556e-01   p_joint 4.891444e-01

Joint ci ratio: 1.269379e-02	ci left: 4.850273e-01	ci right 4.912334e-01	k: 48813	n:100000
Cons ci ratio: 7.539614e-03	ci left: 7.271966e-01	ci right 7.327101e-01	k: 72996	n:100000
KS ci ratio: 1.196474e-01	ci left: 9.984202e-03	ci right 1.126442e-02	k: 1061	n:100000
ZIK1   100000 perm   21 sec   (4873 perm/sec)   p_kst 1.061000e-02   p_cons 7.299600e-01   p_joint 4.881300e-01

Joint ci ratio: 1.199728e-02	ci left: 4.895594e-01	ci right 4.954773e-01	k: 54177	n:110000
Cons ci ratio: 7.193981e-03	ci left: 7.270376e-01	ci right 7.322958e-01	k: 80264	n:110000
KS ci ratio: 1.137452e-01	ci left: 1.007387e-02	ci right 1.129759e-02	k: 1174	n:110000
ZIK1   110000 perm   23 sec   (4781 perm/sec)   p_kst 1.067273e-02   p_cons 7.296727e-01   p_joint 4.925182e-01

Joint ci ratio: 1.149672e-02	ci left: 4.892424e-01	ci right 4.949079e-01	k: 59049	n:120000
Cons ci ratio: 6.893640e-03	ci left: 7.268098e-01	ci right 7.318458e-01	k: 87520	n:120000
KS ci ratio: 1.085532e-01	ci left: 1.016611e-02	ci right 1.134105e-02	k: 1289	n:120000
ZIK1   120000 perm   26 sec   (4692 perm/sec)   p_kst 1.074167e-02   p_cons 7.293333e-01   p_joint 4.920750e-01

Joint ci ratio: 1.111541e-02	ci left: 4.862099e-01	ci right 4.916522e-01	k: 63561	n:130000
Cons ci ratio: 6.613304e-03	ci left: 7.275006e-01	ci right 7.323353e-01	k: 94890	n:130000
KS ci ratio: 1.041628e-01	ci left: 1.021525e-02	ci right 1.134520e-02	k: 1400	n:130000
ZIK1   130000 perm   28 sec   (4606 perm/sec)   p_kst 1.076923e-02   p_cons 7.299231e-01   p_joint 4.889308e-01

Joint ci ratio: 9.281891e-03	ci left: 5.576380e-01	ci right 5.628452e-01	k: 78434	n:140000
Cons ci ratio: 6.369188e-03	ci left: 7.278094e-01	ci right 7.324668e-01	k: 102220	n:140000
KS ci ratio: 1.003997e-01	ci left: 1.023033e-02	ci right 1.131865e-02	k: 1507	n:140000
ZIK1   140000 perm   31 sec   (4528 perm/sec)   p_kst 1.076429e-02   p_cons 7.301429e-01   p_joint 5.602429e-01

Joint ci ratio: 9.396458e-03	ci left: 5.345593e-01	ci right 5.396126e-01	k: 80563	n:150000
Cons ci ratio: 5.719533e-03	ci left: 7.557841e-01	ci right 7.601259e-01	k: 113694	n:150000
KS ci ratio: 9.713866e-02	ci left: 1.021801e-02	ci right 1.126770e-02	k: 1610	n:150000
ZIK1   150000 perm   34 sec   (4448 perm/sec)   p_kst 1.073333e-02   p_cons 7.579600e-01   p_joint 5.370867e-01

Outputting figure to mutsig2_images.part000000000194/ZIK1.2_1480_150000_0.010733_0.75796_0.53709.png
                gene_name: ZIK1
               theta_stop: 0.097 
                    nperm: 150000 
                     p_ks: 0.011 
        ci_ks_bounds_left: 0.010 
       ci_ks_bounds_right: 0.011 
                   p_cons: 0.76 
      ci_cons_bounds_left: 0.76 
     ci_cons_bounds_right: 0.76 
                  p_joint: 0.54 
     ci_joint_bounds_left: 0.53 
    ci_joint_bounds_right: 0.54 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000194
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 194 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1647>
Subject: Job 8704424: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1647>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000195> was used as the working directory.
Started at Thu Nov 15 19:38:14 2012
Results reported at Thu Nov 15 19:40:54 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000195.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000195.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 195  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000195.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    185.76 sec.
    Max Memory :      5876 MB
    Max Swap   :      8360 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
195
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 195
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 195: processing genes 17551 - 17641
Calculating significance of each gene.
Using projection method.
17551	ZMYND17	1
17552	ZMYND19	1
17553	ZMYND8	1
17554	ZNF10	1
17555	ZNF100	1
17556	ZNF101	1.187761e-01
17557	ZNF107	1
17558	ZNF114	1
In gene ZNF117 the following bins exceed PROBCAP:
    THCA-EM-A2OX-TP	categ 4	N = 930     n = 1	mu =   1.41e-07
17559	ZNF117	5.937285e-02
17560	ZNF12	1
17561	ZNF121	1
17562	ZNF124	1
17563	ZNF131	1
17564	ZNF132	1
17565	ZNF133	1
17566	ZNF134	1
17567	ZNF135	1
17568	ZNF136	1.130916e-01
17569	ZNF138	1
17570	ZNF14	1
17571	ZNF140	1
17572	ZNF141	1
17573	ZNF142	5.253458e-01
17574	ZNF143	1
17575	ZNF146	1
17576	ZNF148	2.351128e-02
17577	ZNF154	1
17578	ZNF155	1
17579	ZNF157	1
17580	ZNF16	5.030639e-02
In gene ZNF160 the following bins exceed PROBCAP:
    THCA-FE-A233-TP	categ 5	N = 2473    n = 1	mu =   1.41e-07
17581	ZNF160	4.799889e-02
17582	ZNF165	1
17583	ZNF167	1
17584	ZNF169	1
17585	ZNF17	1
17586	ZNF174	1
17587	ZNF175	1
17588	ZNF177	1.536030e-01
17589	ZNF18	1
17590	ZNF180	1
17591	ZNF181	1
17592	ZNF182	1
17593	ZNF184	1
17594	ZNF185	1.153074e-02
17595	ZNF187	1
17596	ZNF189	1
17597	ZNF19	1
17598	ZNF192	1
17599	ZNF193	1
17600	ZNF195	1
17601	ZNF197	1
17602	ZNF2	1
17603	ZNF20	1
17604	ZNF200	1
17605	ZNF202	1
17606	ZNF205	1
17607	ZNF207	1.165755e-01
17608	ZNF208	1.396325e-03
17609	ZNF211	7.779026e-04
17610	ZNF212	1.916269e-01
17611	ZNF213	1
17612	ZNF214	1
17613	ZNF215	1
17614	ZNF217	4.245961e-01
17615	ZNF219	1
17616	ZNF22	1
17617	ZNF221	1
17618	ZNF222	1
17619	ZNF223	1.235693e-01
17620	ZNF224	1
17621	ZNF225	9.077004e-02
17622	ZNF226	7.441358e-02
17623	ZNF227	1
17624	ZNF229	1
17625	ZNF23	1
17626	ZNF230	1
17627	ZNF232	1
17628	ZNF233	1
17629	ZNF234	2.679185e-02
17630	ZNF235	1.237945e-01
17631	ZNF236	2.860561e-01
17632	ZNF238	1
17633	ZNF239	1
17634	ZNF24	1
17635	ZNF248	1
17636	ZNF25	1
17637	ZNF250	2.433405e-01
17638	ZNF251	1.019675e-01
17639	ZNF253	1
17640	ZNF254	6.326878e-03
17641	ZNF256	1
Done

Running MutSig 2:
Scatter job 195: processing genes 17551 - 17641
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZNF208
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 8.802117e-02	ci left: 1.581661e-01	ci right 1.728293e-01	k: 1654	n:10000
Cons ci ratio: 5.013191e-03	ci left: 9.813449e-01	ci right 9.863675e-01	k: 9840	n:10000
KS ci ratio: 1.519441e-01	ci left: 5.764078e-02	ci right 6.721608e-02	k: 623	n:10000
ZNF208   10000 perm   2 sec   (5025 perm/sec)   p_kst 6.230000e-02   p_cons 9.840000e-01   p_joint 1.654000e-01

Joint ci ratio: 8.094596e-02	ci left: 1.006859e-01	ci right 1.092293e-01	k: 2098	n:20000
Cons ci ratio: 3.483251e-03	ci left: 9.826908e-01	ci right 9.861663e-01	k: 19690	n:20000
KS ci ratio: 1.058684e-01	ci left: 6.074404e-02	ci right 6.758334e-02	k: 1282	n:20000
ZNF208   20000 perm   6 sec   (3151 perm/sec)   p_kst 6.410000e-02   p_cons 9.845000e-01   p_joint 1.049000e-01

Joint ci ratio: 5.668246e-02	ci left: 1.335887e-01	ci right 1.414149e-01	k: 4124	n:30000
Cons ci ratio: 3.169081e-03	ci left: 9.791831e-01	ci right 9.823228e-01	k: 29424	n:30000
KS ci ratio: 8.765260e-02	ci left: 5.975402e-02	ci right 6.526442e-02	k: 1874	n:30000
ZNF208   30000 perm   9 sec   (3423 perm/sec)   p_kst 6.246667e-02   p_cons 9.808000e-01   p_joint 1.374667e-01

Outputting figure to mutsig2_images.part000000000195/ZNF208.4_3859_30000_0.062467_0.9808_0.13747.png
                gene_name: ZNF208
               theta_stop: 0.088 
                    nperm: 30000 
                     p_ks: 0.062 
        ci_ks_bounds_left: 0.060 
       ci_ks_bounds_right: 0.065 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.14 
     ci_joint_bounds_left: 0.13 
    ci_joint_bounds_right: 0.14 

Current progress: 14 percent done.
ZNF211
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.248092e-02	ci left: 7.439188e-01	ci right 7.609339e-01	k: 7525	n:10000
KS ci ratio: 3.516050e-02	ci left: 5.442931e-01	ci right 5.638753e-01	k: 5541	n:10000
ZNF211   10000 perm   2 sec   (6454 perm/sec)   p_kst 5.541000e-01   p_cons 7.525000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000195/ZNF211.3_1750_10000_0.5541_0.7525_1.png
                gene_name: ZNF211
               theta_stop: 0.035 
                    nperm: 10000 
                     p_ks: 0.55 
        ci_ks_bounds_left: 0.54 
       ci_ks_bounds_right: 0.56 
                   p_cons: 0.75 
      ci_cons_bounds_left: 0.74 
     ci_cons_bounds_right: 0.76 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 29 percent done.
ZNF148
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 6.387201e-02	ci left: 2.647803e-01	ci right 2.823518e-01	k: 2735	n:10000
Cons ci ratio: 1.677072e-01	ci left: 4.744132e-02	ci right 5.622208e-02	k: 517	n:10000
KS ci ratio: 4.684082e-02	ci left: 4.021307e-01	ci right 4.215207e-01	k: 4118	n:10000
ZNF148   10000 perm   2 sec   (6062 perm/sec)   p_kst 4.118000e-01   p_cons 5.170000e-02   p_joint 2.735000e-01

Joint ci ratio: 9.393256e-02	ci left: 7.632531e-02	ci right 8.389730e-02	k: 1601	n:20000
Cons ci ratio: 1.213959e-01	ci left: 4.653451e-02	ci right 5.259730e-02	k: 990	n:20000
KS ci ratio: 3.303583e-02	ci left: 4.062640e-01	ci right 4.199613e-01	k: 8262	n:20000
ZNF148   20000 perm   4 sec   (5440 perm/sec)   p_kst 4.131000e-01   p_cons 4.950000e-02   p_joint 8.005000e-02

Joint ci ratio: 7.266175e-02	ci left: 8.521100e-02	ci right 9.166896e-02	k: 2652	n:30000
Cons ci ratio: 9.906753e-02	ci left: 4.713763e-02	ci right 5.208339e-02	k: 1487	n:30000
KS ci ratio: 2.706554e-02	ci left: 4.058903e-01	ci right 4.170602e-01	k: 12344	n:30000
ZNF148   30000 perm   6 sec   (5199 perm/sec)   p_kst 4.114667e-01   p_cons 4.956667e-02   p_joint 8.840000e-02

Outputting figure to mutsig2_images.part000000000195/ZNF148.2_2409_30000_0.41147_0.049567_0.0884.png
                gene_name: ZNF148
               theta_stop: 0.099 
                    nperm: 30000 
                     p_ks: 0.41 
        ci_ks_bounds_left: 0.41 
       ci_ks_bounds_right: 0.42 
                   p_cons: 0.050 
      ci_cons_bounds_left: 0.047 
     ci_cons_bounds_right: 0.052 
                  p_joint: 0.088 
     ci_joint_bounds_left: 0.085 
    ci_joint_bounds_right: 0.092 

Current progress: 43 percent done.
ZNF160
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.535413e-02	ci left: 3.246562e-01	ci right 3.432406e-01	k: 3339	n:10000
Cons ci ratio: 8.366514e-02	ci left: 1.724157e-01	ci right 1.875712e-01	k: 1799	n:10000
KS ci ratio: 4.073706e-02	ci left: 4.708643e-01	ci right 4.905469e-01	k: 4807	n:10000
ZNF160   10000 perm   2 sec   (6065 perm/sec)   p_kst 4.807000e-01   p_cons 1.799000e-01   p_joint 3.339000e-01

Outputting figure to mutsig2_images.part000000000195/ZNF160.2_2473_10000_0.4807_0.1799_0.3339.png
                gene_name: ZNF160
               theta_stop: 0.084 
                    nperm: 10000 
                     p_ks: 0.48 
        ci_ks_bounds_left: 0.47 
       ci_ks_bounds_right: 0.49 
                   p_cons: 0.18 
      ci_cons_bounds_left: 0.17 
     ci_cons_bounds_right: 0.19 
                  p_joint: 0.33 
     ci_joint_bounds_left: 0.32 
    ci_joint_bounds_right: 0.34 

Current progress: 57 percent done.
ZNF185
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 5.672566e-02	ci left: 3.139366e-01	ci right 3.323665e-01	k: 3231	n:10000
KS ci ratio: 8.683729e-03	ci left: 9.489806e-01	ci right 9.573529e-01	k: 9533	n:10000
ZNF185   10000 perm   2 sec   (6215 perm/sec)   p_kst 9.533000e-01   p_cons 3.231000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000195/ZNF185.2_2402_10000_0.9533_0.3231_1.png
                gene_name: ZNF185
               theta_stop: 0.057 
                    nperm: 10000 
                     p_ks: 0.95 
        ci_ks_bounds_left: 0.95 
       ci_ks_bounds_right: 0.96 
                   p_cons: 0.32 
      ci_cons_bounds_left: 0.31 
     ci_cons_bounds_right: 0.33 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 71 percent done.
ZNF234
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.134726e-02	ci left: 6.002590e-01	ci right 6.194770e-01	k: 6099	n:10000
Cons ci ratio: 4.045260e-02	ci left: 4.743609e-01	ci right 4.940483e-01	k: 4842	n:10000
KS ci ratio: 3.337438e-02	ci left: 5.699534e-01	ci right 5.894001e-01	k: 5797	n:10000
ZNF234   10000 perm   2 sec   (6621 perm/sec)   p_kst 5.797000e-01   p_cons 4.842000e-01   p_joint 6.099000e-01

Outputting figure to mutsig2_images.part000000000195/ZNF234.2_2119_10000_0.5797_0.4842_0.6099.png
                gene_name: ZNF234
               theta_stop: 0.040 
                    nperm: 10000 
                     p_ks: 0.58 
        ci_ks_bounds_left: 0.57 
       ci_ks_bounds_right: 0.59 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.47 
     ci_cons_bounds_right: 0.49 
                  p_joint: 0.61 
     ci_joint_bounds_left: 0.60 
    ci_joint_bounds_right: 0.62 

Current progress: 86 percent done.
ZNF254
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.695096e-02	ci left: 6.697486e-01	ci right 6.881471e-01	k: 6790	n:10000
Cons ci ratio: 3.425892e-02	ci left: 5.571200e-01	ci right 5.766410e-01	k: 5669	n:10000
KS ci ratio: 6.565505e-03	ci left: 9.694208e-01	ci right 9.758999e-01	k: 9728	n:10000
ZNF254   10000 perm   2 sec   (6466 perm/sec)   p_kst 9.728000e-01   p_cons 5.669000e-01   p_joint 6.790000e-01

Outputting figure to mutsig2_images.part000000000195/ZNF254.2_1996_10000_0.9728_0.5669_0.679.png
                gene_name: ZNF254
               theta_stop: 0.034 
                    nperm: 10000 
                     p_ks: 0.97 
        ci_ks_bounds_left: 0.97 
       ci_ks_bounds_right: 0.98 
                   p_cons: 0.57 
      ci_cons_bounds_left: 0.56 
     ci_cons_bounds_right: 0.58 
                  p_joint: 0.68 
     ci_joint_bounds_left: 0.67 
    ci_joint_bounds_right: 0.69 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000195
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 195 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1710>
Subject: Job 8704426: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1710>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000196> was used as the working directory.
Started at Thu Nov 15 19:38:14 2012
Results reported at Thu Nov 15 19:40:55 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000196.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000196.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 196  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000196.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    183.64 sec.
    Max Memory :      5824 MB
    Max Swap   :      8410 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
196
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 196
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 196: processing genes 17642 - 17731
Calculating significance of each gene.
Using projection method.
17642	ZNF257	1
17643	ZNF259	1
17644	ZNF260	1.303705e-01
17645	ZNF263	1.357554e-01
17646	ZNF264	1
17647	ZNF266	1
17648	ZNF267	2.625115e-01
17649	ZNF268	1.542492e-02
17650	ZNF273	1
17651	ZNF274	1
17652	ZNF275	1
17653	ZNF276	1
17654	ZNF277	1
17655	ZNF28	2.503046e-01
17656	ZNF280A	1
17657	ZNF280B	6.988441e-02
17658	ZNF280C	2.411908e-01
17659	ZNF280D	1
17660	ZNF281	1
17661	ZNF282	1
17662	ZNF283	1
17663	ZNF284	1
17664	ZNF285	1
17665	ZNF286A	1
17666	ZNF286B	1
17667	ZNF287	1
17668	ZNF292	5.250451e-01
In gene ZNF295 the following bins exceed PROBCAP:
    THCA-FY-A3RA-TP	categ 6	N = 3205    n = 1	mu =   2.02e-07
17669	ZNF295	3.133074e-01
17670	ZNF296	1
17671	ZNF3	1
17672	ZNF30	1
17673	ZNF300	1.950407e-01
17674	ZNF302	1
17675	ZNF304	1
17676	ZNF311	1.873747e-01
17677	ZNF317	1
17678	ZNF318	6.582404e-02
17679	ZNF319	5.008717e-02
17680	ZNF32	1
17681	ZNF320	1
17682	ZNF321	1
17683	ZNF322A	9.440760e-02
17684	ZNF322B	1
17685	ZNF323	1
17686	ZNF324	1
17687	ZNF324B	1
17688	ZNF326	1
17689	ZNF329	1
17690	ZNF330	1
17691	ZNF331	1
17692	ZNF333	1
17693	ZNF334	1
17694	ZNF335	4.511124e-01
17695	ZNF337	1.545131e-01
17696	ZNF33A	1
17697	ZNF33B	1.842553e-01
17698	ZNF34	1
17699	ZNF341	3.242771e-02
17700	ZNF343	1
17701	ZNF345	1.306570e-01
17702	ZNF346	1
17703	ZNF347	1
17704	ZNF35	1
17705	ZNF350	1
17706	ZNF354A	1
17707	ZNF354B	1
17708	ZNF354C	1
17709	ZNF358	1
17710	ZNF362	6.253091e-02
17711	ZNF365	2.572162e-01
17712	ZNF366	1
17713	ZNF367	1
17714	ZNF37A	1
17715	ZNF382	1
17716	ZNF383	1
17717	ZNF384	8.510277e-02
17718	ZNF385A	1
17719	ZNF385B	1
17720	ZNF385D	1.220170e-01
17721	ZNF391	1
17722	ZNF394	1
17723	ZNF395	1
17724	ZNF396	1
17725	ZNF397	1
17726	ZNF397OS	1
17727	ZNF398	1
17728	ZNF404	1
17729	ZNF407	1.208744e-01
17730	ZNF408	1
17731	ZNF41	1
Done

Running MutSig 2:
Scatter job 196: processing genes 17642 - 17731
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZNF28
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.285669e-02	ci left: 5.775764e-01	ci right 5.969727e-01	k: 5873	n:10000
Cons ci ratio: 2.000918e-03	ci left: 9.963117e-01	ci right 9.983815e-01	k: 9975	n:10000
KS ci ratio: 4.435967e-02	ci left: 4.286440e-01	ci right 4.481919e-01	k: 4384	n:10000
ZNF28   10000 perm   2 sec   (5831 perm/sec)   p_kst 4.384000e-01   p_cons 9.975000e-01   p_joint 5.873000e-01

Outputting figure to mutsig2_images.part000000000196/ZNF28.3_2002_10000_0.4384_0.9975_0.5873.png
                gene_name: ZNF28
               theta_stop: 0.044 
                    nperm: 10000 
                     p_ks: 0.44 
        ci_ks_bounds_left: 0.43 
       ci_ks_bounds_right: 0.45 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.59 
     ci_joint_bounds_left: 0.58 
    ci_joint_bounds_right: 0.60 

Current progress: 25 percent done.
ZNF318
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.805205e-01	ci left: 8.505237e-03	ci right 1.258745e-02	k: 104	n:10000
Cons ci ratio: 1.228514e-01	ci left: 8.669623e-02	ci right 9.814248e-02	k: 923	n:10000
KS ci ratio: 2.494362e-01	ci left: 2.108956e-02	ci right 2.719198e-02	k: 240	n:10000
ZNF318   10000 perm   2 sec   (4402 perm/sec)   p_kst 2.400000e-02   p_cons 9.230000e-02   p_joint 1.040000e-02

Joint ci ratio: 1.335450e-01	ci left: 3.853576e-02	ci right 4.409860e-02	k: 825	n:20000
Cons ci ratio: 8.605233e-02	ci left: 8.994073e-02	ci right 9.807774e-02	k: 1879	n:20000
KS ci ratio: 1.667107e-01	ci left: 2.465375e-02	ci right 2.918520e-02	k: 537	n:20000
ZNF318   20000 perm   5 sec   (4001 perm/sec)   p_kst 2.685000e-02   p_cons 9.395000e-02   p_joint 4.125000e-02

Joint ci ratio: 1.443238e-01	ci left: 2.226551e-02	ci right 2.576084e-02	k: 719	n:30000
Cons ci ratio: 7.070555e-02	ci left: 8.963796e-02	ci right 9.624112e-02	k: 2787	n:30000
KS ci ratio: 1.376166e-01	ci left: 2.451849e-02	ci right 2.817402e-02	k: 789	n:30000
ZNF318   30000 perm   8 sec   (3860 perm/sec)   p_kst 2.630000e-02   p_cons 9.290000e-02   p_joint 2.396667e-02

Joint ci ratio: 9.127816e-02	ci left: 4.205968e-02	ci right 4.610684e-02	k: 1762	n:40000
Cons ci ratio: 5.791070e-02	ci left: 9.979087e-02	ci right 1.057669e-01	k: 4110	n:40000
KS ci ratio: 1.202591e-01	ci left: 2.431688e-02	ci right 2.745246e-02	k: 1034	n:40000
ZNF318   40000 perm   11 sec   (3772 perm/sec)   p_kst 2.585000e-02   p_cons 1.027500e-01   p_joint 4.405000e-02

Joint ci ratio: 9.137639e-02	ci left: 3.387554e-02	ci right 3.713868e-02	k: 1774	n:50000
Cons ci ratio: 5.165010e-02	ci left: 1.006256e-01	ci right 1.059805e-01	k: 5164	n:50000
KS ci ratio: 1.093441e-01	ci left: 2.368809e-02	ci right 2.644743e-02	k: 1252	n:50000
ZNF318   50000 perm   14 sec   (3694 perm/sec)   p_kst 2.504000e-02   p_cons 1.032800e-01   p_joint 3.548000e-02

Joint ci ratio: 6.635614e-02	ci left: 5.313982e-02	ci right 5.680338e-02	k: 3297	n:60000
Cons ci ratio: 4.734182e-02	ci left: 1.001170e-01	ci right 1.049882e-01	k: 6152	n:60000
KS ci ratio: 1.000084e-01	ci left: 2.371667e-02	ci right 2.622957e-02	k: 1497	n:60000
ZNF318   60000 perm   17 sec   (3626 perm/sec)   p_kst 2.495000e-02   p_cons 1.025333e-01   p_joint 5.495000e-02

Joint ci ratio: 6.507269e-02	ci left: 4.767966e-02	ci right 5.090069e-02	k: 3449	n:70000
Cons ci ratio: 4.371310e-02	ci left: 1.007859e-01	ci right 1.053042e-01	k: 7212	n:70000
KS ci ratio: 9.304592e-02	ci left: 2.357677e-02	ci right 2.589143e-02	k: 1730	n:70000
ZNF318   70000 perm   20 sec   (3563 perm/sec)   p_kst 2.471429e-02   p_cons 1.030286e-01   p_joint 4.927143e-02

Outputting figure to mutsig2_images.part000000000196/ZNF318.3_6880_70000_0.024714_0.10303_0.049271.png
                gene_name: ZNF318
               theta_stop: 0.093 
                    nperm: 70000 
                     p_ks: 0.025 
        ci_ks_bounds_left: 0.024 
       ci_ks_bounds_right: 0.026 
                   p_cons: 0.10 
      ci_cons_bounds_left: 0.10 
     ci_cons_bounds_right: 0.11 
                  p_joint: 0.049 
     ci_joint_bounds_left: 0.048 
    ci_joint_bounds_right: 0.051 

Current progress: 50 percent done.
ZNF341
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.553197e-02	ci left: 5.390841e-01	ci right 5.586874e-01	k: 5489	n:10000
Cons ci ratio: 2.796419e-02	ci left: 6.533372e-01	ci right 6.719680e-01	k: 6627	n:10000
KS ci ratio: 1.099325e-01	ci left: 1.065655e-01	ci right 1.190610e-01	k: 1127	n:10000
ZNF341   10000 perm   2 sec   (5917 perm/sec)   p_kst 1.127000e-01   p_cons 6.627000e-01   p_joint 5.489000e-01

Joint ci ratio: 3.043493e-02	ci left: 4.464329e-01	ci right 4.602807e-01	k: 9067	n:20000
Cons ci ratio: 1.980761e-02	ci left: 6.553459e-01	ci right 6.685070e-01	k: 13239	n:20000
KS ci ratio: 7.820511e-02	ci left: 1.072187e-01	ci right 1.159946e-01	k: 2231	n:20000
ZNF341   20000 perm   4 sec   (5289 perm/sec)   p_kst 1.115500e-01   p_cons 6.619500e-01   p_joint 4.533500e-01

Outputting figure to mutsig2_images.part000000000196/ZNF341.2_2604_20000_0.11155_0.66195_0.45335.png
                gene_name: ZNF341
               theta_stop: 0.078 
                    nperm: 20000 
                     p_ks: 0.11 
        ci_ks_bounds_left: 0.11 
       ci_ks_bounds_right: 0.12 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.66 
     ci_cons_bounds_right: 0.67 
                  p_joint: 0.45 
     ci_joint_bounds_left: 0.45 
    ci_joint_bounds_right: 0.46 

Current progress: 75 percent done.
ZNF407
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.793918e-02	ci left: 6.537398e-01	ci right 6.723652e-01	k: 6631	n:10000
Cons ci ratio: 3.151217e-02	ci left: 5.977488e-01	ci right 6.169886e-01	k: 6074	n:10000
KS ci ratio: 3.049091e-02	ci left: 6.134166e-01	ci right 6.325117e-01	k: 6230	n:10000
ZNF407   10000 perm   2 sec   (4539 perm/sec)   p_kst 6.230000e-01   p_cons 6.074000e-01   p_joint 6.631000e-01

Outputting figure to mutsig2_images.part000000000196/ZNF407.2_6909_10000_0.623_0.6074_0.6631.png
                gene_name: ZNF407
               theta_stop: 0.032 
                    nperm: 10000 
                     p_ks: 0.62 
        ci_ks_bounds_left: 0.61 
       ci_ks_bounds_right: 0.63 
                   p_cons: 0.61 
      ci_cons_bounds_left: 0.60 
     ci_cons_bounds_right: 0.62 
                  p_joint: 0.66 
     ci_joint_bounds_left: 0.65 
    ci_joint_bounds_right: 0.67 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000196
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 196 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1726>
Subject: Job 8704427: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1726>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000197> was used as the working directory.
Started at Thu Nov 15 19:38:14 2012
Results reported at Fri Nov 16 01:12:20 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000197.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000197.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 197  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000197.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  19754.93 sec.
    Max Memory :      5904 MB
    Max Swap   :      8588 MB

    Max Processes  :         7
    Max Threads    :        70

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
197
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 197
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 197: processing genes 17732 - 17822
Calculating significance of each gene.
Using projection method.
17732	ZNF410	1.957876e-01
17733	ZNF414	1
17734	ZNF415	1
17735	ZNF416	1
17736	ZNF417	1
17737	ZNF418	1
17738	ZNF419	1.203019e-01
17739	ZNF420	1
17740	ZNF423	1
17741	ZNF425	1
17742	ZNF426	1.962908e-01
17743	ZNF428	1
17744	ZNF429	1
17745	ZNF43	1.480519e-02
17746	ZNF430	1
17747	ZNF431	1
17748	ZNF432	1
17749	ZNF433	1
17750	ZNF434	1
17751	ZNF436	1
17752	ZNF438	1
17753	ZNF439	1
17754	ZNF44	1.092862e-01
17755	ZNF440	1
17756	ZNF441	1
17757	ZNF442	2.410187e-01
17758	ZNF443	1
17759	ZNF445	1
17760	ZNF446	1
17761	ZNF449	1
17762	ZNF45	1
17763	ZNF451	2.013527e-01
17764	ZNF454	1
17765	ZNF460	1
17766	ZNF461	2.569729e-02
17767	ZNF462	1
17768	ZNF467	6.800507e-02
17769	ZNF468	1.004214e-01
17770	ZNF470	1
17771	ZNF471	1
17772	ZNF473	1
17773	ZNF474	1
17774	ZNF479	1.727903e-03
17775	ZNF48	2.155897e-01
17776	ZNF480	5.688528e-02
17777	ZNF483	1
17778	ZNF484	1
17779	ZNF485	1
17780	ZNF486	1
17781	ZNF488	8.415761e-02
17782	ZNF490	1.819884e-01
17783	ZNF491	1.337854e-01
17784	ZNF492	1.165222e-01
17785	ZNF493	1
17786	ZNF496	1
17787	ZNF497	1.251234e-01
17788	ZNF498	1
17789	ZNF500	1.477593e-01
17790	ZNF501	1
17791	ZNF502	9.950230e-02
17792	ZNF503	3.577419e-02
17793	ZNF506	1
17794	ZNF507	1.474996e-01
17795	ZNF510	5.889547e-02
17796	ZNF511	1
17797	ZNF512	1
17798	ZNF512B	1
17799	ZNF513	1
17800	ZNF514	1
17801	ZNF516	1
17802	ZNF517	1
17803	ZNF518A	1
17804	ZNF518B	1
17805	ZNF519	1
17806	ZNF521	3.897856e-01
17807	ZNF524	1
17808	ZNF526	1
17809	ZNF527	1
17810	ZNF528	2.583388e-01
17811	ZNF529	1
17812	ZNF530	1
17813	ZNF532	4.715083e-01
17814	ZNF534	1
17815	ZNF536	1
17816	ZNF540	1
17817	ZNF543	2.322565e-01
17818	ZNF544	1
17819	ZNF546	1
17820	ZNF547	1
17821	ZNF548	1
17822	ZNF549	1
Done

Running MutSig 2:
Scatter job 197: processing genes 17732 - 17822
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZNF443
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.512569e-01	ci left: 1.014137e-02	ci right 1.454954e-02	k: 122	n:10000
Cons ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
KS ci ratio: 2.262761e+00	ci left: 2.422185e-05	ci right 7.222801e-04	k: 2	n:10000
ZNF443   10000 perm   2 sec   (6331 perm/sec)   p_kst 2.000000e-04   p_cons 1   p_joint 1.220000e-02

Joint ci ratio: 3.660847e-01	ci left: 4.658600e-03	ci right 6.788973e-03	k: 113	n:20000
Cons ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
KS ci ratio: 1.385617e+00	ci left: 1.407294e-04	ci right 7.210000e-04	k: 7	n:20000
ZNF443   20000 perm   5 sec   (3657 perm/sec)   p_kst 3.500000e-04   p_cons 1   p_joint 5.650000e-03

Joint ci ratio: 2.374838e-01	ci left: 7.931051e-03	ci right 1.009897e-02	k: 269	n:30000
Cons ci ratio: 1.306580e-04	ci left: 9.998770e-01	ci right 1	k: 30000	n:30000
KS ci ratio: 1.181688e+00	ci left: 1.598575e-04	ci right 6.129261e-04	k: 10	n:30000
ZNF443   30000 perm   7 sec   (4062 perm/sec)   p_kst 3.333333e-04   p_cons 1   p_joint 8.966667e-03

Joint ci ratio: 3.666135e-01	ci left: 2.328750e-03	ci right 3.395458e-03	k: 113	n:40000
Cons ci ratio: 9.799510e-05	ci left: 9.999078e-01	ci right 1	k: 40000	n:40000
KS ci ratio: 9.797917e-01	ci left: 2.098994e-04	ci right 6.184302e-04	k: 15	n:40000
ZNF443   40000 perm   9 sec   (4272 perm/sec)   p_kst 3.750000e-04   p_cons 1   p_joint 2.825000e-03

Joint ci ratio: 2.030337e-01	ci left: 6.648502e-03	ci right 8.169529e-03	k: 369	n:50000
Cons ci ratio: 7.839686e-05	ci left: 9.999262e-01	ci right 1	k: 50000	n:50000
KS ci ratio: 9.237773e-01	ci left: 1.980746e-04	ci right 5.443173e-04	k: 17	n:50000
ZNF443   50000 perm   11 sec   (4375 perm/sec)   p_kst 3.400000e-04   p_cons 1   p_joint 7.380000e-03

Joint ci ratio: 3.434312e-01	ci left: 1.795318e-03	ci right 2.554126e-03	k: 129	n:60000
Cons ci ratio: 9.239298e-05	ci left: 9.999071e-01	ci right 9.999996e-01	k: 59999	n:60000
KS ci ratio: 9.238066e-01	ci left: 1.650605e-04	ci right 4.536055e-04	k: 17	n:60000
ZNF443   60000 perm   14 sec   (4428 perm/sec)   p_kst 2.833333e-04   p_cons 9.999833e-01   p_joint 2.150000e-03

Joint ci ratio: 3.297886e-01	ci left: 1.682692e-03	ci right 2.359653e-03	k: 140	n:70000
Cons ci ratio: 7.919426e-05	ci left: 9.999204e-01	ci right 9.999996e-01	k: 69999	n:70000
KS ci ratio: 8.000238e-01	ci left: 2.082971e-04	ci right 4.929779e-04	k: 23	n:70000
ZNF443   70000 perm   16 sec   (4407 perm/sec)   p_kst 3.285714e-04   p_cons 9.999857e-01   p_joint 2.000000e-03

Joint ci ratio: 1.914611e-01	ci left: 4.713369e-03	ci right 5.723024e-03	k: 416	n:80000
Cons ci ratio: 6.929517e-05	ci left: 9.999304e-01	ci right 9.999997e-01	k: 79999	n:80000
KS ci ratio: 7.542723e-01	ci left: 2.123114e-04	ci right 4.761643e-04	k: 26	n:80000
ZNF443   80000 perm   18 sec   (4415 perm/sec)   p_kst 3.250000e-04   p_cons 9.999875e-01   p_joint 5.200000e-03

Joint ci ratio: 1.486579e-01	ci left: 7.096476e-03	ci right 8.246709e-03	k: 689	n:90000
Cons ci ratio: 6.159583e-05	ci left: 9.999381e-01	ci right 9.999997e-01	k: 89999	n:90000
KS ci ratio: 7.278044e-01	ci left: 2.067407e-04	ci right 4.496110e-04	k: 28	n:90000
ZNF443   90000 perm   20 sec   (4402 perm/sec)   p_kst 3.111111e-04   p_cons 9.999889e-01   p_joint 7.655556e-03

Joint ci ratio: 1.415575e-01	ci left: 7.071053e-03	ci right 8.157799e-03	k: 760	n:100000
Cons ci ratio: 5.543634e-05	ci left: 9.999443e-01	ci right 9.999997e-01	k: 99999	n:100000
KS ci ratio: 7.039401e-01	ci left: 2.024176e-04	ci right 4.282412e-04	k: 30	n:100000
ZNF443   100000 perm   23 sec   (4380 perm/sec)   p_kst 3.000000e-04   p_cons 9.999900e-01   p_joint 7.600000e-03

Joint ci ratio: 1.559772e-01	ci left: 5.263642e-03	ci right 6.162720e-03	k: 627	n:110000
Cons ci ratio: 5.039674e-05	ci left: 9.999493e-01	ci right 9.999998e-01	k: 109999	n:110000
KS ci ratio: 6.624925e-01	ci left: 2.140636e-04	ci right 4.318970e-04	k: 34	n:110000
ZNF443   110000 perm   25 sec   (4347 perm/sec)   p_kst 3.090909e-04   p_cons 9.999909e-01   p_joint 5.700000e-03

Joint ci ratio: 1.522810e-01	ci left: 5.073337e-03	ci right 5.917498e-03	k: 658	n:120000
Cons ci ratio: 4.619707e-05	ci left: 9.999536e-01	ci right 9.999998e-01	k: 119999	n:120000
KS ci ratio: 5.976848e-01	ci left: 2.522605e-04	ci right 4.730692e-04	k: 42	n:120000
ZNF443   120000 perm   28 sec   (4311 perm/sec)   p_kst 3.500000e-04   p_cons 9.999917e-01   p_joint 5.483333e-03

Joint ci ratio: 1.608797e-01	ci left: 4.180325e-03	ci right 4.918966e-03	k: 590	n:130000
Cons ci ratio: 4.264349e-05	ci left: 9.999571e-01	ci right 9.999998e-01	k: 129999	n:130000
KS ci ratio: 5.976932e-01	ci left: 2.328550e-04	ci right 4.366813e-04	k: 42	n:130000
ZNF443   130000 perm   30 sec   (4270 perm/sec)   p_kst 3.230769e-04   p_cons 9.999923e-01   p_joint 4.538462e-03

Joint ci ratio: 1.595560e-01	ci left: 3.950257e-03	ci right 4.641950e-03	k: 600	n:140000
Cons ci ratio: 3.959756e-05	ci left: 9.999602e-01	ci right 9.999998e-01	k: 139999	n:140000
KS ci ratio: 5.778754e-01	ci left: 2.344616e-04	ci right 4.300733e-04	k: 45	n:140000
ZNF443   140000 perm   33 sec   (4224 perm/sec)   p_kst 3.214286e-04   p_cons 9.999929e-01   p_joint 4.285714e-03

Joint ci ratio: 1.546202e-01	ci left: 3.936685e-03	ci right 4.602701e-03	k: 639	n:150000
Cons ci ratio: 3.695774e-05	ci left: 9.999629e-01	ci right 9.999998e-01	k: 149999	n:150000
KS ci ratio: 5.488146e-01	ci left: 2.474162e-04	ci right 4.394351e-04	k: 50	n:150000
ZNF443   150000 perm   36 sec   (4177 perm/sec)   p_kst 3.333333e-04   p_cons 9.999933e-01   p_joint 4.260000e-03

Joint ci ratio: 1.839162e-01	ci left: 2.570855e-03	ci right 3.097417e-03	k: 452	n:160000
Cons ci ratio: 4.243498e-05	ci left: 9.999548e-01	ci right 9.999985e-01	k: 159998	n:160000
KS ci ratio: 5.237387e-01	ci left: 2.589697e-04	ci right 4.474147e-04	k: 55	n:160000
ZNF443   160000 perm   39 sec   (4132 perm/sec)   p_kst 3.437500e-04   p_cons 9.999875e-01   p_joint 2.825000e-03

Joint ci ratio: 1.803731e-01	ci left: 2.520677e-03	ci right 3.025929e-03	k: 470	n:170000
Cons ci ratio: 3.993882e-05	ci left: 9.999575e-01	ci right 9.999986e-01	k: 169998	n:170000
KS ci ratio: 5.102505e-01	ci left: 2.590795e-04	ci right 4.410277e-04	k: 58	n:170000
ZNF443   170000 perm   42 sec   (4085 perm/sec)   p_kst 3.411765e-04   p_cons 9.999882e-01   p_joint 2.764706e-03

Joint ci ratio: 1.543129e-01	ci left: 3.296508e-03	ci right 3.853002e-03	k: 642	n:180000
Cons ci ratio: 3.772001e-05	ci left: 9.999599e-01	ci right 9.999987e-01	k: 179998	n:180000
KS ci ratio: 5.102555e-01	ci left: 2.446857e-04	ci right 4.165273e-04	k: 58	n:180000
ZNF443   180000 perm   45 sec   (4036 perm/sec)   p_kst 3.222222e-04   p_cons 9.999889e-01   p_joint 3.566667e-03

Joint ci ratio: 1.530197e-01	ci left: 3.178661e-03	ci right 3.710351e-03	k: 653	n:190000
Cons ci ratio: 3.573475e-05	ci left: 9.999620e-01	ci right 9.999987e-01	k: 189998	n:190000
KS ci ratio: 5.018227e-01	ci left: 2.409890e-04	ci right 4.064652e-04	k: 60	n:190000
ZNF443   190000 perm   48 sec   (3981 perm/sec)   p_kst 3.157895e-04   p_cons 9.999895e-01   p_joint 3.436842e-03

Joint ci ratio: 1.505138e-01	ci left: 3.125544e-03	ci right 3.639016e-03	k: 675	n:200000
Cons ci ratio: 3.919990e-05	ci left: 9.999562e-01	ci right 9.999969e-01	k: 199997	n:200000
KS ci ratio: 5.018268e-01	ci left: 2.289392e-04	ci right 3.861428e-04	k: 60	n:200000
ZNF443   200000 perm   51 sec   (3933 perm/sec)   p_kst 3.000000e-04   p_cons 9.999850e-01   p_joint 3.375000e-03

Joint ci ratio: 1.478087e-01	ci left: 3.091309e-03	ci right 3.589222e-03	k: 700	n:210000
Cons ci ratio: 3.733324e-05	ci left: 9.999583e-01	ci right 9.999971e-01	k: 209997	n:210000
KS ci ratio: 4.937983e-01	ci left: 2.263646e-04	ci right 3.784662e-04	k: 62	n:210000
ZNF443   210000 perm   54 sec   (3887 perm/sec)   p_kst 2.952381e-04   p_cons 9.999857e-01   p_joint 3.333333e-03

Joint ci ratio: 1.817890e-01	ci left: 1.917364e-03	ci right 2.305032e-03	k: 463	n:220000
Cons ci ratio: 3.563628e-05	ci left: 9.999601e-01	ci right 9.999972e-01	k: 219997	n:220000
KS ci ratio: 4.938017e-01	ci left: 2.160750e-04	ci right 3.612638e-04	k: 62	n:220000
ZNF443   220000 perm   57 sec   (3842 perm/sec)   p_kst 2.818182e-04   p_cons 9.999864e-01   p_joint 2.104545e-03

Joint ci ratio: 1.776265e-01	ci left: 1.925351e-03	ci right 2.304762e-03	k: 485	n:230000
Cons ci ratio: 3.408688e-05	ci left: 9.999619e-01	ci right 9.999973e-01	k: 229997	n:230000
KS ci ratio: 4.824484e-01	ci left: 2.181180e-04	ci right 3.601940e-04	k: 65	n:230000
ZNF443   230000 perm   61 sec   (3797 perm/sec)   p_kst 2.826087e-04   p_cons 9.999870e-01   p_joint 2.108696e-03

Joint ci ratio: 1.875630e-01	ci left: 1.646288e-03	ci right 1.990922e-03	k: 435	n:240000
Cons ci ratio: 3.266660e-05	ci left: 9.999635e-01	ci right 9.999974e-01	k: 239997	n:240000
KS ci ratio: 4.788364e-01	ci left: 2.126912e-04	ci right 3.498543e-04	k: 66	n:240000
ZNF443   240000 perm   64 sec   (3754 perm/sec)   p_kst 2.750000e-04   p_cons 9.999875e-01   p_joint 1.812500e-03

Joint ci ratio: 1.963350e-01	ci left: 1.435721e-03	ci right 1.752014e-03	k: 397	n:250000
Cons ci ratio: 3.135994e-05	ci left: 9.999649e-01	ci right 9.999975e-01	k: 249997	n:250000
KS ci ratio: 4.788391e-01	ci left: 2.041833e-04	ci right 3.358607e-04	k: 66	n:250000
ZNF443   250000 perm   67 sec   (3712 perm/sec)   p_kst 2.640000e-04   p_cons 9.999880e-01   p_joint 1.588000e-03

Joint ci ratio: 1.943940e-01	ci left: 1.409763e-03	ci right 1.716904e-03	k: 405	n:260000
Cons ci ratio: 3.015379e-05	ci left: 9.999663e-01	ci right 9.999976e-01	k: 259997	n:260000
KS ci ratio: 4.587360e-01	ci left: 2.166814e-04	ci right 3.487263e-04	k: 72	n:260000
ZNF443   260000 perm   71 sec   (3668 perm/sec)   p_kst 2.769231e-04   p_cons 9.999885e-01   p_joint 1.557692e-03

Joint ci ratio: 1.915846e-01	ci left: 1.399846e-03	ci right 1.699905e-03	k: 417	n:270000
Cons ci ratio: 2.903698e-05	ci left: 9.999675e-01	ci right 9.999977e-01	k: 269997	n:270000
KS ci ratio: 4.525789e-01	ci left: 2.152130e-04	ci right 3.440629e-04	k: 74	n:270000
ZNF443   270000 perm   74 sec   (3627 perm/sec)   p_kst 2.740741e-04   p_cons 9.999889e-01   p_joint 1.544444e-03

Joint ci ratio: 1.873723e-01	ci left: 1.414491e-03	ci right 1.710265e-03	k: 436	n:280000
Cons ci ratio: 2.799995e-05	ci left: 9.999687e-01	ci right 9.999978e-01	k: 279997	n:280000
KS ci ratio: 4.382059e-01	ci left: 2.233813e-04	ci right 3.516220e-04	k: 79	n:280000
ZNF443   280000 perm   78 sec   (3584 perm/sec)   p_kst 2.821429e-04   p_cons 9.999893e-01   p_joint 1.557143e-03

Joint ci ratio: 1.840334e-01	ci left: 1.418324e-03	ci right 1.709024e-03	k: 452	n:290000
Cons ci ratio: 2.703444e-05	ci left: 9.999698e-01	ci right 9.999979e-01	k: 289997	n:290000
KS ci ratio: 4.226411e-01	ci left: 2.341271e-04	ci right 3.624144e-04	k: 85	n:290000
ZNF443   290000 perm   82 sec   (3543 perm/sec)   p_kst 2.931034e-04   p_cons 9.999897e-01   p_joint 1.558621e-03

Joint ci ratio: 1.343433e-01	ci left: 2.639836e-03	ci right 3.023202e-03	k: 848	n:300000
Cons ci ratio: 2.613329e-05	ci left: 9.999708e-01	ci right 9.999979e-01	k: 299997	n:300000
KS ci ratio: 4.108646e-01	ci left: 2.412421e-04	ci right 3.687383e-04	k: 90	n:300000
ZNF443   300000 perm   86 sec   (3503 perm/sec)   p_kst 3.000000e-04   p_cons 9.999900e-01   p_joint 2.826667e-03

Joint ci ratio: 1.347479e-01	ci left: 2.539085e-03	ci right 2.909018e-03	k: 843	n:310000
Cons ci ratio: 2.529028e-05	ci left: 9.999717e-01	ci right 9.999980e-01	k: 309997	n:310000
KS ci ratio: 4.086269e-01	ci left: 2.363532e-04	ci right 3.604003e-04	k: 91	n:310000
ZNF443   310000 perm   90 sec   (3462 perm/sec)   p_kst 2.935484e-04   p_cons 9.999903e-01   p_joint 2.719355e-03

Joint ci ratio: 1.483186e-01	ci left: 2.016551e-03	ci right 2.342569e-03	k: 696	n:320000
Cons ci ratio: 2.449996e-05	ci left: 9.999726e-01	ci right 9.999981e-01	k: 319997	n:320000
KS ci ratio: 4.021232e-01	ci left: 2.373862e-04	ci right 3.594638e-04	k: 94	n:320000
ZNF443   320000 perm   94 sec   (3420 perm/sec)   p_kst 2.937500e-04   p_cons 9.999906e-01   p_joint 2.175000e-03

Joint ci ratio: 1.490755e-01	ci left: 1.935015e-03	ci right 2.249589e-03	k: 689	n:330000
Cons ci ratio: 2.375754e-05	ci left: 9.999734e-01	ci right 9.999981e-01	k: 329997	n:330000
KS ci ratio: 3.959204e-01	ci left: 2.383713e-04	ci right 3.585695e-04	k: 97	n:330000
ZNF443   330000 perm   98 sec   (3380 perm/sec)   p_kst 2.939394e-04   p_cons 9.999909e-01   p_joint 2.087879e-03

Joint ci ratio: 1.475873e-01	ci left: 1.917749e-03	ci right 2.226130e-03	k: 703	n:340000
Cons ci ratio: 2.305879e-05	ci left: 9.999742e-01	ci right 9.999982e-01	k: 339997	n:340000
KS ci ratio: 3.919418e-01	ci left: 2.366600e-04	ci right 3.544857e-04	k: 99	n:340000
ZNF443   340000 perm   102 sec   (3342 perm/sec)   p_kst 2.911765e-04   p_cons 9.999912e-01   p_joint 2.067647e-03

Joint ci ratio: 1.470693e-01	ci left: 1.876713e-03	ci right 2.177342e-03	k: 708	n:350000
Cons ci ratio: 2.239997e-05	ci left: 9.999750e-01	ci right 9.999982e-01	k: 349997	n:350000
KS ci ratio: 3.843300e-01	ci left: 2.402117e-04	ci right 3.568958e-04	k: 103	n:350000
ZNF443   350000 perm   106 sec   (3306 perm/sec)   p_kst 2.942857e-04   p_cons 9.999914e-01   p_joint 2.022857e-03

Joint ci ratio: 1.457407e-01	ci left: 1.859369e-03	ci right 2.154295e-03	k: 721	n:360000
Cons ci ratio: 2.177775e-05	ci left: 9.999756e-01	ci right 9.999983e-01	k: 359997	n:360000
KS ci ratio: 3.771451e-01	ci left: 2.435870e-04	ci right 3.591515e-04	k: 107	n:360000
ZNF443   360000 perm   110 sec   (3269 perm/sec)   p_kst 2.972222e-04   p_cons 9.999917e-01   p_joint 2.002778e-03

Joint ci ratio: 1.442510e-01	ci left: 1.848184e-03	ci right 2.138082e-03	k: 736	n:370000
Cons ci ratio: 2.369023e-05	ci left: 9.999723e-01	ci right 9.999971e-01	k: 369996	n:370000
KS ci ratio: 3.720136e-01	ci left: 2.443484e-04	ci right 3.583127e-04	k: 110	n:370000
ZNF443   370000 perm   115 sec   (3231 perm/sec)   p_kst 2.972973e-04   p_cons 9.999892e-01   p_joint 1.989189e-03

Joint ci ratio: 1.424269e-01	ci left: 1.847755e-03	ci right 2.133609e-03	k: 755	n:380000
Cons ci ratio: 2.306681e-05	ci left: 9.999730e-01	ci right 9.999971e-01	k: 379996	n:380000
KS ci ratio: 3.670861e-01	ci left: 2.450798e-04	ci right 3.575081e-04	k: 113	n:380000
ZNF443   380000 perm   119 sec   (3196 perm/sec)   p_kst 2.973684e-04   p_cons 9.999895e-01   p_joint 1.986842e-03

Joint ci ratio: 1.400381e-01	ci left: 1.864689e-03	ci right 2.147920e-03	k: 781	n:390000
Cons ci ratio: 2.247535e-05	ci left: 9.999737e-01	ci right 9.999972e-01	k: 389996	n:390000
KS ci ratio: 3.577899e-01	ci left: 2.527797e-04	ci right 3.651204e-04	k: 119	n:390000
ZNF443   390000 perm   123 sec   (3160 perm/sec)   p_kst 3.051282e-04   p_cons 9.999897e-01   p_joint 2.002564e-03

Joint ci ratio: 1.398626e-01	ci left: 1.822894e-03	ci right 2.099401e-03	k: 783	n:400000
Cons ci ratio: 2.191347e-05	ci left: 9.999744e-01	ci right 9.999973e-01	k: 399996	n:400000
KS ci ratio: 3.563093e-01	ci left: 2.487359e-04	ci right 3.587159e-04	k: 120	n:400000
ZNF443   400000 perm   129 sec   (3093 perm/sec)   p_kst 3.000000e-04   p_cons 9.999900e-01   p_joint 1.957500e-03

Joint ci ratio: 1.372593e-01	ci left: 1.849069e-03	ci right 2.123899e-03	k: 813	n:410000
Cons ci ratio: 2.137899e-05	ci left: 9.999750e-01	ci right 9.999973e-01	k: 409996	n:410000
KS ci ratio: 3.464278e-01	ci left: 2.582360e-04	ci right 3.685402e-04	k: 127	n:410000
ZNF443   410000 perm   134 sec   (3060 perm/sec)   p_kst 3.097561e-04   p_cons 9.999902e-01   p_joint 1.982927e-03

Joint ci ratio: 1.355221e-01	ci left: 1.853338e-03	ci right 2.125035e-03	k: 834	n:420000
Cons ci ratio: 2.086997e-05	ci left: 9.999756e-01	ci right 9.999974e-01	k: 419996	n:420000
KS ci ratio: 3.411382e-01	ci left: 2.607893e-04	ci right 3.701082e-04	k: 131	n:420000
ZNF443   420000 perm   139 sec   (3026 perm/sec)   p_kst 3.119048e-04   p_cons 9.999905e-01   p_joint 1.985714e-03

Joint ci ratio: 1.363457e-01	ci left: 1.787768e-03	ci right 2.051574e-03	k: 824	n:430000
Cons ci ratio: 2.038462e-05	ci left: 9.999762e-01	ci right 9.999975e-01	k: 429996	n:430000
KS ci ratio: 3.385833e-01	ci left: 2.589786e-04	ci right 3.665477e-04	k: 133	n:430000
ZNF443   430000 perm   144 sec   (2993 perm/sec)   p_kst 3.093023e-04   p_cons 9.999907e-01   p_joint 1.916279e-03

Joint ci ratio: 1.355283e-01	ci left: 1.769090e-03	ci right 2.028449e-03	k: 834	n:440000
Cons ci ratio: 1.992133e-05	ci left: 9.999767e-01	ci right 9.999975e-01	k: 439996	n:440000
KS ci ratio: 3.373277e-01	ci left: 2.551725e-04	ci right 3.606821e-04	k: 134	n:440000
ZNF443   440000 perm   149 sec   (2962 perm/sec)   p_kst 3.045455e-04   p_cons 9.999909e-01   p_joint 1.895455e-03

Joint ci ratio: 1.340908e-01	ci left: 1.768428e-03	ci right 2.024721e-03	k: 852	n:450000
Cons ci ratio: 1.947864e-05	ci left: 9.999772e-01	ci right 9.999976e-01	k: 449996	n:450000
KS ci ratio: 3.336410e-01	ci left: 2.556071e-04	ci right 3.598931e-04	k: 137	n:450000
ZNF443   450000 perm   154 sec   (2924 perm/sec)   p_kst 3.044444e-04   p_cons 9.999911e-01   p_joint 1.893333e-03

Joint ci ratio: 1.330045e-01	ci left: 1.759401e-03	ci right 2.012157e-03	k: 866	n:460000
Cons ci ratio: 1.905519e-05	ci left: 9.999777e-01	ci right 9.999976e-01	k: 459996	n:460000
KS ci ratio: 3.289080e-01	ci left: 2.580230e-04	ci right 3.614856e-04	k: 141	n:460000
ZNF443   460000 perm   159 sec   (2896 perm/sec)   p_kst 3.065217e-04   p_cons 9.999913e-01   p_joint 1.882609e-03

Joint ci ratio: 1.318692e-01	ci left: 1.752824e-03	ci right 2.002317e-03	k: 881	n:470000
Cons ci ratio: 1.864976e-05	ci left: 9.999782e-01	ci right 9.999977e-01	k: 469996	n:470000
KS ci ratio: 3.289090e-01	ci left: 2.525331e-04	ci right 3.537946e-04	k: 141	n:470000
ZNF443   470000 perm   164 sec   (2868 perm/sec)   p_kst 3.000000e-04   p_cons 9.999915e-01   p_joint 1.874468e-03

Joint ci ratio: 1.349734e-01	ci left: 1.635748e-03	ci right 1.874497e-03	k: 841	n:480000
Cons ci ratio: 1.826122e-05	ci left: 9.999787e-01	ci right 9.999977e-01	k: 479996	n:480000
KS ci ratio: 3.277577e-01	ci left: 2.491835e-04	ci right 3.486784e-04	k: 142	n:480000
ZNF443   480000 perm   169 sec   (2840 perm/sec)   p_kst 2.958333e-04   p_cons 9.999917e-01   p_joint 1.752083e-03

Joint ci ratio: 1.364447e-01	ci left: 1.566874e-03	ci right 1.798266e-03	k: 823	n:490000
Cons ci ratio: 1.788854e-05	ci left: 9.999791e-01	ci right 9.999978e-01	k: 489996	n:490000
KS ci ratio: 3.254898e-01	ci left: 2.478451e-04	ci right 3.459777e-04	k: 144	n:490000
ZNF443   490000 perm   175 sec   (2797 perm/sec)   p_kst 2.938776e-04   p_cons 9.999918e-01   p_joint 1.679592e-03

Joint ci ratio: 1.351391e-01	ci left: 1.566449e-03	ci right 1.795387e-03	k: 839	n:500000
Cons ci ratio: 1.753077e-05	ci left: 9.999795e-01	ci right 9.999978e-01	k: 499996	n:500000
KS ci ratio: 3.200183e-01	ci left: 2.520782e-04	ci right 3.498654e-04	k: 149	n:500000
ZNF443   500000 perm   181 sec   (2766 perm/sec)   p_kst 2.980000e-04   p_cons 9.999920e-01   p_joint 1.678000e-03

Joint ci ratio: 1.344219e-01	ci left: 1.552786e-03	ci right 1.778426e-03	k: 848	n:510000
Cons ci ratio: 1.718703e-05	ci left: 9.999799e-01	ci right 9.999979e-01	k: 509996	n:510000
KS ci ratio: 3.189575e-01	ci left: 2.489390e-04	ci right 3.451229e-04	k: 150	n:510000
ZNF443   510000 perm   192 sec   (2659 perm/sec)   p_kst 2.941176e-04   p_cons 9.999922e-01   p_joint 1.662745e-03

Joint ci ratio: 1.324844e-01	ci left: 1.569397e-03	ci right 1.793906e-03	k: 873	n:520000
Cons ci ratio: 1.685651e-05	ci left: 9.999803e-01	ci right 9.999979e-01	k: 519996	n:520000
KS ci ratio: 3.158355e-01	ci left: 2.494615e-04	ci right 3.447132e-04	k: 153	n:520000
ZNF443   520000 perm   200 sec   (2605 perm/sec)   p_kst 2.942308e-04   p_cons 9.999923e-01   p_joint 1.678846e-03

Joint ci ratio: 1.319582e-01	ci left: 1.552556e-03	ci right 1.773704e-03	k: 880	n:530000
Cons ci ratio: 1.653847e-05	ci left: 9.999807e-01	ci right 9.999979e-01	k: 529996	n:530000
KS ci ratio: 3.118117e-01	ci left: 2.517075e-04	ci right 3.463487e-04	k: 157	n:530000
ZNF443   530000 perm   205 sec   (2584 perm/sec)   p_kst 2.962264e-04   p_cons 9.999925e-01   p_joint 1.660377e-03

Joint ci ratio: 1.307761e-01	ci left: 1.552461e-03	ci right 1.771460e-03	k: 896	n:540000
Cons ci ratio: 1.623220e-05	ci left: 9.999810e-01	ci right 9.999980e-01	k: 539996	n:540000
KS ci ratio: 3.098570e-01	ci left: 2.504611e-04	ci right 3.439266e-04	k: 159	n:540000
ZNF443   540000 perm   211 sec   (2562 perm/sec)   p_kst 2.944444e-04   p_cons 9.999926e-01   p_joint 1.659259e-03

Joint ci ratio: 1.311447e-01	ci left: 1.515439e-03	ci right 1.729865e-03	k: 891	n:550000
Cons ci ratio: 1.593707e-05	ci left: 9.999814e-01	ci right 9.999980e-01	k: 549996	n:550000
KS ci ratio: 3.042048e-01	ci left: 2.559762e-04	ci right 3.494201e-04	k: 165	n:550000
ZNF443   550000 perm   216 sec   (2541 perm/sec)   p_kst 3.000000e-04   p_cons 9.999927e-01   p_joint 1.620000e-03

Joint ci ratio: 1.297696e-01	ci left: 1.521199e-03	ci right 1.734010e-03	k: 910	n:560000
Cons ci ratio: 1.565248e-05	ci left: 9.999817e-01	ci right 9.999981e-01	k: 559996	n:560000
KS ci ratio: 3.023889e-01	ci left: 2.547048e-04	ci right 3.470228e-04	k: 167	n:560000
ZNF443   560000 perm   222 sec   (2519 perm/sec)   p_kst 2.982143e-04   p_cons 9.999929e-01   p_joint 1.625000e-03

Joint ci ratio: 1.326463e-01	ci left: 1.428332e-03	ci right 1.632929e-03	k: 871	n:570000
Cons ci ratio: 1.537787e-05	ci left: 9.999820e-01	ci right 9.999981e-01	k: 569996	n:570000
KS ci ratio: 3.014935e-01	ci left: 2.518577e-04	ci right 3.428217e-04	k: 168	n:570000
ZNF443   570000 perm   228 sec   (2498 perm/sec)   p_kst 2.947368e-04   p_cons 9.999930e-01   p_joint 1.528070e-03

Joint ci ratio: 1.315942e-01	ci left: 1.427045e-03	ci right 1.629710e-03	k: 885	n:580000
Cons ci ratio: 1.511274e-05	ci left: 9.999823e-01	ci right 9.999981e-01	k: 579996	n:580000
KS ci ratio: 2.979874e-01	ci left: 2.538934e-04	ci right 3.443245e-04	k: 172	n:580000
ZNF443   580000 perm   234 sec   (2475 perm/sec)   p_kst 2.965517e-04   p_cons 9.999931e-01   p_joint 1.525862e-03

Joint ci ratio: 1.310049e-01	ci left: 1.415971e-03	ci right 1.616093e-03	k: 893	n:590000
Cons ci ratio: 1.485659e-05	ci left: 9.999826e-01	ci right 9.999982e-01	k: 589996	n:590000
KS ci ratio: 2.954368e-01	ci left: 2.542965e-04	ci right 3.439506e-04	k: 175	n:590000
ZNF443   590000 perm   240 sec   (2457 perm/sec)   p_kst 2.966102e-04   p_cons 9.999932e-01   p_joint 1.513559e-03

Joint ci ratio: 1.298480e-01	ci left: 1.418169e-03	ci right 1.616694e-03	k: 909	n:600000
Cons ci ratio: 1.460898e-05	ci left: 9.999829e-01	ci right 9.999982e-01	k: 599996	n:600000
KS ci ratio: 2.929506e-01	ci left: 2.546892e-04	ci right 3.435860e-04	k: 178	n:600000
ZNF443   600000 perm   246 sec   (2437 perm/sec)   p_kst 2.966667e-04   p_cons 9.999933e-01   p_joint 1.515000e-03

Joint ci ratio: 1.287909e-01	ci left: 1.418715e-03	ci right 1.615576e-03	k: 924	n:610000
Cons ci ratio: 1.436949e-05	ci left: 9.999832e-01	ci right 9.999982e-01	k: 609996	n:610000
KS ci ratio: 2.889424e-01	ci left: 2.581127e-04	ci right 3.467466e-04	k: 183	n:610000
ZNF443   610000 perm   252 sec   (2418 perm/sec)   p_kst 3.000000e-04   p_cons 9.999934e-01   p_joint 1.514754e-03

Joint ci ratio: 1.281009e-01	ci left: 1.411442e-03	ci right 1.606166e-03	k: 934	n:620000
Cons ci ratio: 1.548711e-05	ci left: 9.999812e-01	ci right 9.999974e-01	k: 619995	n:620000
KS ci ratio: 2.873850e-01	ci left: 2.569422e-04	ci right 3.446123e-04	k: 185	n:620000
ZNF443   620000 perm   258 sec   (2399 perm/sec)   p_kst 2.983871e-04   p_cons 9.999919e-01   p_joint 1.506452e-03

Joint ci ratio: 1.275571e-01	ci left: 1.401331e-03	ci right 1.593776e-03	k: 942	n:630000
Cons ci ratio: 1.646248e-05	ci left: 9.999793e-01	ci right 9.999965e-01	k: 629994	n:630000
KS ci ratio: 2.858525e-01	ci left: 2.558102e-04	ci right 3.425444e-04	k: 187	n:630000
ZNF443   630000 perm   265 sec   (2380 perm/sec)   p_kst 2.968254e-04   p_cons 9.999905e-01   p_joint 1.495238e-03

Joint ci ratio: 1.265545e-01	ci left: 1.402127e-03	ci right 1.593056e-03	k: 957	n:640000
Cons ci ratio: 1.620525e-05	ci left: 9.999796e-01	ci right 9.999966e-01	k: 639994	n:640000
KS ci ratio: 2.858532e-01	ci left: 2.518131e-04	ci right 3.371923e-04	k: 187	n:640000
ZNF443   640000 perm   271 sec   (2361 perm/sec)   p_kst 2.921875e-04   p_cons 9.999906e-01   p_joint 1.495312e-03

Joint ci ratio: 1.252533e-01	ci left: 1.410357e-03	ci right 1.600284e-03	k: 977	n:650000
Cons ci ratio: 1.595594e-05	ci left: 9.999799e-01	ci right 9.999966e-01	k: 649994	n:650000
KS ci ratio: 2.806747e-01	ci left: 2.579435e-04	ci right 3.435367e-04	k: 194	n:650000
ZNF443   650000 perm   278 sec   (2342 perm/sec)   p_kst 2.984615e-04   p_cons 9.999908e-01   p_joint 1.503077e-03

Joint ci ratio: 1.314580e-01	ci left: 1.256993e-03	ci right 1.435308e-03	k: 887	n:660000
Cons ci ratio: 1.571418e-05	ci left: 9.999802e-01	ci right 9.999967e-01	k: 659994	n:660000
KS ci ratio: 2.806753e-01	ci left: 2.540352e-04	ci right 3.383317e-04	k: 194	n:660000
ZNF443   660000 perm   284 sec   (2324 perm/sec)   p_kst 2.939394e-04   p_cons 9.999909e-01   p_joint 1.343939e-03

Joint ci ratio: 1.302171e-01	ci left: 1.262775e-03	ci right 1.440089e-03	k: 904	n:670000
Cons ci ratio: 1.547964e-05	ci left: 9.999805e-01	ci right 9.999967e-01	k: 669994	n:670000
KS ci ratio: 2.764538e-01	ci left: 2.585735e-04	ci right 3.428610e-04	k: 200	n:670000
ZNF443   670000 perm   291 sec   (2306 perm/sec)   p_kst 2.985075e-04   p_cons 9.999910e-01   p_joint 1.349254e-03

Joint ci ratio: 1.292214e-01	ci left: 1.264125e-03	ci right 1.440167e-03	k: 918	n:680000
Cons ci ratio: 1.525200e-05	ci left: 9.999808e-01	ci right 9.999968e-01	k: 679994	n:680000
KS ci ratio: 2.744135e-01	ci left: 2.588780e-04	ci right 3.425346e-04	k: 203	n:680000
ZNF443   680000 perm   297 sec   (2286 perm/sec)   p_kst 2.985294e-04   p_cons 9.999912e-01   p_joint 1.350000e-03

Joint ci ratio: 1.279737e-01	ci left: 1.271052e-03	ci right 1.446220e-03	k: 936	n:690000
Cons ci ratio: 1.503096e-05	ci left: 9.999811e-01	ci right 9.999968e-01	k: 689994	n:690000
KS ci ratio: 2.724178e-01	ci left: 2.591760e-04	ci right 3.422155e-04	k: 206	n:690000
ZNF443   690000 perm   304 sec   (2268 perm/sec)   p_kst 2.985507e-04   p_cons 9.999913e-01   p_joint 1.356522e-03

Joint ci ratio: 1.272966e-01	ci left: 1.266724e-03	ci right 1.440302e-03	k: 946	n:700000
Cons ci ratio: 1.481623e-05	ci left: 9.999813e-01	ci right 9.999969e-01	k: 699994	n:700000
KS ci ratio: 2.717625e-01	ci left: 2.568045e-04	ci right 3.388526e-04	k: 207	n:700000
ZNF443   700000 perm   311 sec   (2251 perm/sec)   p_kst 2.957143e-04   p_cons 9.999914e-01   p_joint 1.351429e-03

Joint ci ratio: 1.264978e-01	ci left: 1.265248e-03	ci right 1.437454e-03	k: 958	n:710000
Cons ci ratio: 1.460755e-05	ci left: 9.999816e-01	ci right 9.999969e-01	k: 709994	n:710000
KS ci ratio: 2.698236e-01	ci left: 2.571261e-04	ci right 3.385915e-04	k: 210	n:710000
ZNF443   710000 perm   318 sec   (2233 perm/sec)   p_kst 2.957746e-04   p_cons 9.999915e-01   p_joint 1.349296e-03

Joint ci ratio: 1.253910e-01	ci left: 1.270542e-03	ci right 1.441843e-03	k: 975	n:720000
Cons ci ratio: 1.440467e-05	ci left: 9.999819e-01	ci right 9.999969e-01	k: 719994	n:720000
KS ci ratio: 2.679257e-01	ci left: 2.574407e-04	ci right 3.383357e-04	k: 213	n:720000
ZNF443   720000 perm   325 sec   (2216 perm/sec)   p_kst 2.958333e-04   p_cons 9.999917e-01   p_joint 1.354167e-03

Joint ci ratio: 1.265001e-01	ci left: 1.230582e-03	ci right 1.398073e-03	k: 958	n:730000
Cons ci ratio: 1.420734e-05	ci left: 9.999821e-01	ci right 9.999970e-01	k: 729994	n:730000
KS ci ratio: 2.660672e-01	ci left: 2.577487e-04	ci right 3.380850e-04	k: 216	n:730000
ZNF443   730000 perm   332 sec   (2199 perm/sec)   p_kst 2.958904e-04   p_cons 9.999918e-01   p_joint 1.312329e-03

Joint ci ratio: 1.258460e-01	ci left: 1.227039e-03	ci right 1.393120e-03	k: 968	n:740000
Cons ci ratio: 1.498305e-05	ci left: 9.999805e-01	ci right 9.999962e-01	k: 739993	n:740000
KS ci ratio: 2.642469e-01	ci left: 2.580502e-04	ci right 3.378392e-04	k: 219	n:740000
ZNF443   740000 perm   339 sec   (2183 perm/sec)   p_kst 2.959459e-04   p_cons 9.999905e-01   p_joint 1.308108e-03

Joint ci ratio: 1.093454e-01	ci left: 1.617107e-03	ci right 1.805441e-03	k: 1282	n:750000
Cons ci ratio: 1.733496e-05	ci left: 9.999755e-01	ci right 9.999936e-01	k: 749990	n:750000
KS ci ratio: 2.636487e-01	ci left: 2.558546e-04	ci right 3.347561e-04	k: 220	n:750000
ZNF443   750000 perm   346 sec   (2166 perm/sec)   p_kst 2.933333e-04   p_cons 9.999867e-01   p_joint 1.709333e-03

Joint ci ratio: 1.085028e-01	ci left: 1.621429e-03	ci right 1.808718e-03	k: 1302	n:760000
Cons ci ratio: 1.710687e-05	ci left: 9.999758e-01	ci right 9.999937e-01	k: 759990	n:760000
KS ci ratio: 2.607156e-01	ci left: 2.586347e-04	ci right 3.373616e-04	k: 225	n:760000
ZNF443   760000 perm   353 sec   (2150 perm/sec)   p_kst 2.960526e-04   p_cons 9.999868e-01   p_joint 1.713158e-03

Joint ci ratio: 1.075979e-01	ci left: 1.628171e-03	ci right 1.814571e-03	k: 1324	n:770000
Cons ci ratio: 1.688470e-05	ci left: 9.999761e-01	ci right 9.999938e-01	k: 769990	n:770000
KS ci ratio: 2.584384e-01	ci left: 2.601327e-04	ci right 3.385123e-04	k: 229	n:770000
ZNF443   770000 perm   364 sec   (2113 perm/sec)   p_kst 2.974026e-04   p_cons 9.999870e-01   p_joint 1.719481e-03

Joint ci ratio: 1.111870e-01	ci left: 1.502545e-03	ci right 1.680677e-03	k: 1240	n:780000
Cons ci ratio: 1.740941e-05	ci left: 9.999748e-01	ci right 9.999930e-01	k: 779989	n:780000
KS ci ratio: 2.556739e-01	ci left: 2.627950e-04	ci right 3.409947e-04	k: 234	n:780000
ZNF443   780000 perm   372 sec   (2095 perm/sec)   p_kst 3.000000e-04   p_cons 9.999859e-01   p_joint 1.589744e-03

Joint ci ratio: 1.136451e-01	ci left: 1.418319e-03	ci right 1.590432e-03	k: 1187	n:790000
Cons ci ratio: 1.718904e-05	ci left: 9.999751e-01	ci right 9.999930e-01	k: 789989	n:790000
KS ci ratio: 2.535252e-01	ci left: 2.642087e-04	ci right 3.420640e-04	k: 238	n:790000
ZNF443   790000 perm   388 sec   (2035 perm/sec)   p_kst 3.012658e-04   p_cons 9.999861e-01   p_joint 1.502532e-03

Joint ci ratio: 1.129344e-01	ci left: 1.418809e-03	ci right 1.589833e-03	k: 1202	n:800000
Cons ci ratio: 1.697417e-05	ci left: 9.999754e-01	ci right 9.999931e-01	k: 799989	n:800000
KS ci ratio: 2.504011e-01	ci left: 2.679326e-04	ci right 3.457607e-04	k: 244	n:800000
ZNF443   800000 perm   396 sec   (2020 perm/sec)   p_kst 3.050000e-04   p_cons 9.999862e-01   p_joint 1.502500e-03

Joint ci ratio: 1.121447e-01	ci left: 1.421690e-03	ci right 1.591784e-03	k: 1219	n:810000
Cons ci ratio: 1.676461e-05	ci left: 9.999757e-01	ci right 9.999932e-01	k: 809989	n:810000
KS ci ratio: 2.483816e-01	ci left: 2.692545e-04	ci right 3.467383e-04	k: 248	n:810000
ZNF443   810000 perm   404 sec   (2007 perm/sec)   p_kst 3.061728e-04   p_cons 9.999864e-01   p_joint 1.504938e-03

Joint ci ratio: 1.115520e-01	ci left: 1.419762e-03	ci right 1.588669e-03	k: 1232	n:820000
Cons ci ratio: 1.656017e-05	ci left: 9.999760e-01	ci right 9.999933e-01	k: 819989	n:820000
KS ci ratio: 2.473902e-01	ci left: 2.682584e-04	ci right 3.451000e-04	k: 250	n:820000
ZNF443   820000 perm   411 sec   (1994 perm/sec)   p_kst 3.048780e-04   p_cons 9.999866e-01   p_joint 1.502439e-03

Joint ci ratio: 1.129845e-01	ci left: 1.366354e-03	ci right 1.531133e-03	k: 1201	n:830000
Cons ci ratio: 1.636065e-05	ci left: 9.999763e-01	ci right 9.999934e-01	k: 829989	n:830000
KS ci ratio: 2.454421e-01	ci left: 2.695481e-04	ci right 3.460584e-04	k: 254	n:830000
ZNF443   830000 perm   419 sec   (1980 perm/sec)   p_kst 3.060241e-04   p_cons 9.999867e-01   p_joint 1.446988e-03

Joint ci ratio: 1.124249e-01	ci left: 1.363971e-03	ci right 1.527594e-03	k: 1213	n:840000
Cons ci ratio: 1.616587e-05	ci left: 9.999766e-01	ci right 9.999935e-01	k: 839989	n:840000
KS ci ratio: 2.430703e-01	ci left: 2.719273e-04	ci right 3.482546e-04	k: 259	n:840000
ZNF443   840000 perm   427 sec   (1967 perm/sec)   p_kst 3.083333e-04   p_cons 9.999869e-01   p_joint 1.444048e-03

Joint ci ratio: 1.121486e-01	ci left: 1.354784e-03	ci right 1.516879e-03	k: 1219	n:850000
Cons ci ratio: 1.597569e-05	ci left: 9.999768e-01	ci right 9.999935e-01	k: 849989	n:850000
KS ci ratio: 2.416800e-01	ci left: 2.720433e-04	ci right 3.479008e-04	k: 262	n:850000
ZNF443   850000 perm   435 sec   (1953 perm/sec)   p_kst 3.082353e-04   p_cons 9.999871e-01   p_joint 1.434118e-03

Joint ci ratio: 1.119659e-01	ci left: 1.343551e-03	ci right 1.504023e-03	k: 1223	n:860000
Cons ci ratio: 1.578992e-05	ci left: 9.999771e-01	ci right 9.999936e-01	k: 859989	n:860000
KS ci ratio: 2.407664e-01	ci left: 2.710650e-04	ci right 3.463214e-04	k: 264	n:860000
ZNF443   860000 perm   443 sec   (1939 perm/sec)   p_kst 3.069767e-04   p_cons 9.999872e-01   p_joint 1.422093e-03

Joint ci ratio: 1.114664e-01	ci left: 1.340398e-03	ci right 1.499732e-03	k: 1234	n:870000
Cons ci ratio: 1.560843e-05	ci left: 9.999774e-01	ci right 9.999937e-01	k: 869989	n:870000
KS ci ratio: 2.398632e-01	ci left: 2.701097e-04	ci right 3.447777e-04	k: 266	n:870000
ZNF443   870000 perm   451 sec   (1927 perm/sec)   p_kst 3.057471e-04   p_cons 9.999874e-01   p_joint 1.418391e-03

Joint ci ratio: 1.109289e-01	ci left: 1.338424e-03	ci right 1.496706e-03	k: 1246	n:880000
Cons ci ratio: 1.543106e-05	ci left: 9.999776e-01	ci right 9.999938e-01	k: 879989	n:880000
KS ci ratio: 2.389699e-01	ci left: 2.691767e-04	ci right 3.432686e-04	k: 268	n:880000
ZNF443   880000 perm   459 sec   (1916 perm/sec)   p_kst 3.045455e-04   p_cons 9.999875e-01   p_joint 1.415909e-03

Joint ci ratio: 1.170586e-01	ci left: 1.184749e-03	ci right 1.333135e-03	k: 1119	n:890000
Cons ci ratio: 1.525768e-05	ci left: 9.999779e-01	ci right 9.999938e-01	k: 889989	n:890000
KS ci ratio: 2.389704e-01	ci left: 2.661521e-04	ci right 3.394117e-04	k: 268	n:890000
ZNF443   890000 perm   467 sec   (1904 perm/sec)   p_kst 3.011236e-04   p_cons 9.999876e-01   p_joint 1.257303e-03

Joint ci ratio: 1.040908e-01	ci left: 1.491420e-03	ci right 1.656259e-03	k: 1415	n:900000
Cons ci ratio: 1.444579e-05	ci left: 9.999796e-01	ci right 9.999947e-01	k: 899990	n:900000
KS ci ratio: 2.385277e-01	ci left: 2.642395e-04	ci right 3.368180e-04	k: 269	n:900000
ZNF443   900000 perm   476 sec   (1893 perm/sec)   p_kst 2.988889e-04   p_cons 9.999889e-01   p_joint 1.572222e-03

Joint ci ratio: 1.037255e-01	ci left: 1.485734e-03	ci right 1.649333e-03	k: 1425	n:910000
Cons ci ratio: 1.428705e-05	ci left: 9.999798e-01	ci right 9.999947e-01	k: 909990	n:910000
KS ci ratio: 2.363490e-01	ci left: 2.665035e-04	ci right 3.389374e-04	k: 274	n:910000
ZNF443   910000 perm   484 sec   (1881 perm/sec)   p_kst 3.010989e-04   p_cons 9.999890e-01   p_joint 1.565934e-03

Joint ci ratio: 1.031126e-01	ci left: 1.487585e-03	ci right 1.650361e-03	k: 1442	n:920000
Cons ci ratio: 1.413175e-05	ci left: 9.999800e-01	ci right 9.999948e-01	k: 919990	n:920000
KS ci ratio: 2.350703e-01	ci left: 2.666750e-04	ci right 3.387064e-04	k: 277	n:920000
ZNF443   920000 perm   492 sec   (1870 perm/sec)   p_kst 3.010870e-04   p_cons 9.999891e-01   p_joint 1.567391e-03

Joint ci ratio: 1.024753e-01	ci left: 1.490447e-03	ci right 1.652468e-03	k: 1460	n:930000
Cons ci ratio: 1.397980e-05	ci left: 9.999802e-01	ci right 9.999948e-01	k: 929990	n:930000
KS ci ratio: 2.346489e-01	ci left: 2.648195e-04	ci right 3.362028e-04	k: 278	n:930000
ZNF443   930000 perm   500 sec   (1858 perm/sec)   p_kst 2.989247e-04   p_cons 9.999892e-01   p_joint 1.569892e-03

Joint ci ratio: 1.018497e-01	ci left: 1.493251e-03	ci right 1.654526e-03	k: 1478	n:940000
Cons ci ratio: 1.444609e-05	ci left: 9.999791e-01	ci right 9.999942e-01	k: 939989	n:940000
KS ci ratio: 2.338125e-01	ci left: 2.640051e-04	ci right 3.348785e-04	k: 280	n:940000
ZNF443   940000 perm   509 sec   (1847 perm/sec)   p_kst 2.978723e-04   p_cons 9.999883e-01   p_joint 1.572340e-03

Joint ci ratio: 1.014733e-01	ci left: 1.488817e-03	ci right 1.648983e-03	k: 1489	n:950000
Cons ci ratio: 1.429403e-05	ci left: 9.999793e-01	ci right 9.999942e-01	k: 949989	n:950000
KS ci ratio: 2.325743e-01	ci left: 2.641995e-04	ci right 3.346955e-04	k: 283	n:950000
ZNF443   950000 perm   517 sec   (1836 perm/sec)   p_kst 2.978947e-04   p_cons 9.999884e-01   p_joint 1.567368e-03

Joint ci ratio: 1.006987e-01	ci left: 1.496661e-03	ci right 1.656370e-03	k: 1512	n:960000
Cons ci ratio: 1.414513e-05	ci left: 9.999795e-01	ci right 9.999943e-01	k: 959989	n:960000
KS ci ratio: 2.293656e-01	ci left: 2.692987e-04	ci right 3.400237e-04	k: 291	n:960000
ZNF443   960000 perm   526 sec   (1825 perm/sec)   p_kst 3.031250e-04   p_cons 9.999885e-01   p_joint 1.575000e-03

Joint ci ratio: 1.030096e-01	ci left: 1.413916e-03	ci right 1.568467e-03	k: 1445	n:970000
Cons ci ratio: 1.399931e-05	ci left: 9.999797e-01	ci right 9.999943e-01	k: 969989	n:970000
KS ci ratio: 2.285843e-01	ci left: 2.684660e-04	ci right 3.386982e-04	k: 293	n:970000
ZNF443   970000 perm   535 sec   (1814 perm/sec)   p_kst 3.020619e-04   p_cons 9.999887e-01   p_joint 1.489691e-03

Joint ci ratio: 1.025498e-01	ci left: 1.412413e-03	ci right 1.566068e-03	k: 1458	n:980000
Cons ci ratio: 1.385646e-05	ci left: 9.999799e-01	ci right 9.999944e-01	k: 979989	n:980000
KS ci ratio: 2.278108e-01	ci left: 2.676507e-04	ci right 3.373994e-04	k: 295	n:980000
ZNF443   980000 perm   544 sec   (1803 perm/sec)   p_kst 3.010204e-04   p_cons 9.999888e-01   p_joint 1.487755e-03

Joint ci ratio: 1.018883e-01	ci left: 1.416847e-03	ci right 1.569932e-03	k: 1477	n:990000
Cons ci ratio: 1.371649e-05	ci left: 9.999801e-01	ci right 9.999945e-01	k: 989989	n:990000
KS ci ratio: 2.259106e-01	ci left: 2.697107e-04	ci right 3.393283e-04	k: 300	n:990000
ZNF443   990000 perm   552 sec   (1792 perm/sec)   p_kst 3.030303e-04   p_cons 9.999889e-01   p_joint 1.491919e-03

Joint ci ratio: 1.017856e-01	ci left: 1.405602e-03	ci right 1.557309e-03	k: 1480	n:1000000
Cons ci ratio: 1.357933e-05	ci left: 9.999803e-01	ci right 9.999945e-01	k: 999989	n:1000000
KS ci ratio: 2.251639e-01	ci left: 2.689006e-04	ci right 3.380478e-04	k: 302	n:1000000
ZNF443   1000000 perm   561 sec   (1781 perm/sec)   p_kst 3.020000e-04   p_cons 9.999890e-01   p_joint 1.480000e-03

Joint ci ratio: 1.061072e-01	ci left: 1.277885e-03	ci right 1.422029e-03	k: 1362	n:1010000
Cons ci ratio: 1.344488e-05	ci left: 9.999805e-01	ci right 9.999946e-01	k: 1009989	n:1010000
KS ci ratio: 2.240574e-01	ci left: 2.690414e-04	ci right 3.378380e-04	k: 305	n:1010000
ZNF443   1010000 perm   570 sec   (1771 perm/sec)   p_kst 3.019802e-04   p_cons 9.999891e-01   p_joint 1.348515e-03

Joint ci ratio: 1.058748e-01	ci left: 1.271083e-03	ci right 1.414126e-03	k: 1368	n:1020000
Cons ci ratio: 1.331306e-05	ci left: 9.999807e-01	ci right 9.999946e-01	k: 1019989	n:1020000
KS ci ratio: 2.236924e-01	ci left: 2.673291e-04	ci right 3.355612e-04	k: 306	n:1020000
ZNF443   1020000 perm   579 sec   (1760 perm/sec)   p_kst 3.000000e-04   p_cons 9.999892e-01   p_joint 1.341176e-03

Joint ci ratio: 9.341260e-02	ci left: 1.627050e-03	ci right 1.787423e-03	k: 1757	n:1030000
Cons ci ratio: 1.318381e-05	ci left: 9.999809e-01	ci right 9.999947e-01	k: 1029989	n:1030000
KS ci ratio: 2.226074e-01	ci left: 2.674835e-04	ci right 3.353784e-04	k: 309	n:1030000
ZNF443   1030000 perm   589 sec   (1750 perm/sec)   p_kst 3.000000e-04   p_cons 9.999893e-01   p_joint 1.705825e-03

Joint ci ratio: 9.455154e-02	ci left: 1.571968e-03	ci right 1.728906e-03	k: 1715	n:1040000
Cons ci ratio: 1.359021e-05	ci left: 9.999798e-01	ci right 9.999940e-01	k: 1039988	n:1040000
KS ci ratio: 2.204836e-01	ci left: 2.703607e-04	ci right 3.382424e-04	k: 315	n:1040000
ZNF443   1040000 perm   598 sec   (1740 perm/sec)   p_kst 3.028846e-04   p_cons 9.999885e-01   p_joint 1.649038e-03

Joint ci ratio: 9.403229e-02	ci left: 1.574665e-03	ci right 1.730962e-03	k: 1734	n:1050000
Cons ci ratio: 1.346078e-05	ci left: 9.999800e-01	ci right 9.999941e-01	k: 1049988	n:1050000
KS ci ratio: 2.187595e-01	ci left: 2.722859e-04	ci right 3.400445e-04	k: 320	n:1050000
ZNF443   1050000 perm   607 sec   (1729 perm/sec)   p_kst 3.047619e-04   p_cons 9.999886e-01   p_joint 1.651429e-03

Joint ci ratio: 9.352150e-02	ci left: 1.577314e-03	ci right 1.732976e-03	k: 1753	n:1060000
Cons ci ratio: 1.333379e-05	ci left: 9.999802e-01	ci right 9.999942e-01	k: 1059988	n:1060000
KS ci ratio: 2.177444e-01	ci left: 2.723926e-04	ci right 3.398212e-04	k: 323	n:1060000
ZNF443   1060000 perm   617 sec   (1719 perm/sec)   p_kst 3.047170e-04   p_cons 9.999887e-01   p_joint 1.653774e-03

Joint ci ratio: 9.325632e-02	ci left: 1.571700e-03	ci right 1.726345e-03	k: 1763	n:1070000
Cons ci ratio: 1.320917e-05	ci left: 9.999804e-01	ci right 9.999942e-01	k: 1069988	n:1070000
KS ci ratio: 2.164125e-01	ci left: 2.733820e-04	ci right 3.405865e-04	k: 327	n:1070000
ZNF443   1070000 perm   626 sec   (1709 perm/sec)   p_kst 3.056075e-04   p_cons 9.999888e-01   p_joint 1.647664e-03

Joint ci ratio: 9.291473e-02	ci left: 1.568904e-03	ci right 1.722677e-03	k: 1776	n:1080000
Cons ci ratio: 1.308686e-05	ci left: 9.999806e-01	ci right 9.999943e-01	k: 1079988	n:1080000
KS ci ratio: 2.154296e-01	ci left: 2.734782e-04	ci right 3.403607e-04	k: 330	n:1080000
ZNF443   1080000 perm   637 sec   (1695 perm/sec)   p_kst 3.055556e-04   p_cons 9.999889e-01   p_joint 1.644444e-03

Joint ci ratio: 9.304664e-02	ci left: 1.550029e-03	ci right 1.702180e-03	k: 1771	n:1090000
Cons ci ratio: 1.296680e-05	ci left: 9.999808e-01	ci right 9.999943e-01	k: 1089988	n:1090000
KS ci ratio: 2.147818e-01	ci left: 2.727053e-04	ci right 3.391717e-04	k: 332	n:1090000
ZNF443   1090000 perm   647 sec   (1684 perm/sec)   p_kst 3.045872e-04   p_cons 9.999890e-01   p_joint 1.624771e-03

Joint ci ratio: 9.344431e-02	ci left: 1.522619e-03	ci right 1.672752e-03	k: 1756	n:1100000
Cons ci ratio: 1.284892e-05	ci left: 9.999809e-01	ci right 9.999944e-01	k: 1099988	n:1100000
KS ci ratio: 2.141398e-01	ci left: 2.719466e-04	ci right 3.380040e-04	k: 334	n:1100000
ZNF443   1100000 perm   657 sec   (1674 perm/sec)   p_kst 3.036364e-04   p_cons 9.999891e-01   p_joint 1.596364e-03

Joint ci ratio: 9.472247e-02	ci left: 1.467553e-03	ci right 1.614347e-03	k: 1709	n:1110000
Cons ci ratio: 1.273316e-05	ci left: 9.999811e-01	ci right 9.999944e-01	k: 1109988	n:1110000
KS ci ratio: 2.128726e-01	ci left: 2.729076e-04	ci right 3.387549e-04	k: 338	n:1110000
ZNF443   1110000 perm   667 sec   (1664 perm/sec)   p_kst 3.045045e-04   p_cons 9.999892e-01   p_joint 1.539640e-03

Joint ci ratio: 9.409149e-02	ci left: 1.474501e-03	ci right 1.620953e-03	k: 1732	n:1120000
Cons ci ratio: 1.261947e-05	ci left: 9.999813e-01	ci right 9.999945e-01	k: 1119988	n:1120000
KS ci ratio: 2.116276e-01	ci left: 2.738525e-04	ci right 3.394913e-04	k: 342	n:1120000
ZNF443   1120000 perm   677 sec   (1654 perm/sec)   p_kst 3.053571e-04   p_cons 9.999893e-01   p_joint 1.546429e-03

Joint ci ratio: 9.363329e-02	ci left: 1.476144e-03	ci right 1.622005e-03	k: 1749	n:1130000
Cons ci ratio: 1.250780e-05	ci left: 9.999814e-01	ci right 9.999945e-01	k: 1129988	n:1130000
KS ci ratio: 2.101016e-01	ci left: 2.756202e-04	ci right 3.411450e-04	k: 347	n:1130000
ZNF443   1130000 perm   688 sec   (1643 perm/sec)   p_kst 3.070796e-04   p_cons 9.999894e-01   p_joint 1.547788e-03

Joint ci ratio: 9.326105e-02	ci left: 1.475189e-03	ci right 1.620345e-03	k: 1763	n:1140000
Cons ci ratio: 1.286610e-05	ci left: 9.999805e-01	ci right 9.999939e-01	k: 1139987	n:1140000
KS ci ratio: 2.095006e-01	ci left: 2.748647e-04	ci right 3.399989e-04	k: 349	n:1140000
ZNF443   1140000 perm   698 sec   (1634 perm/sec)   p_kst 3.061404e-04   p_cons 9.999886e-01   p_joint 1.546491e-03

Joint ci ratio: 9.681713e-02	ci left: 1.354546e-03	ci right 1.493202e-03	k: 1636	n:1150000
Cons ci ratio: 1.275422e-05	ci left: 9.999807e-01	ci right 9.999940e-01	k: 1149987	n:1150000
KS ci ratio: 2.089046e-01	ci left: 2.741226e-04	ci right 3.388725e-04	k: 351	n:1150000
ZNF443   1150000 perm   709 sec   (1623 perm/sec)   p_kst 3.052174e-04   p_cons 9.999887e-01   p_joint 1.422609e-03

Joint ci ratio: 9.658168e-02	ci left: 1.349599e-03	ci right 1.487393e-03	k: 1644	n:1160000
Cons ci ratio: 1.264427e-05	ci left: 9.999808e-01	ci right 9.999940e-01	k: 1159987	n:1160000
KS ci ratio: 2.083138e-01	ci left: 2.733935e-04	ci right 3.377653e-04	k: 353	n:1160000
ZNF443   1160000 perm   720 sec   (1611 perm/sec)   p_kst 3.043103e-04   p_cons 9.999888e-01   p_joint 1.417241e-03

Joint ci ratio: 9.623142e-02	ci left: 1.348073e-03	ci right 1.485184e-03	k: 1656	n:1170000
Cons ci ratio: 1.253620e-05	ci left: 9.999810e-01	ci right 9.999941e-01	k: 1169987	n:1170000
KS ci ratio: 2.083140e-01	ci left: 2.710568e-04	ci right 3.348785e-04	k: 353	n:1170000
ZNF443   1170000 perm   730 sec   (1602 perm/sec)   p_kst 3.017094e-04   p_cons 9.999889e-01   p_joint 1.415385e-03

Joint ci ratio: 9.591371e-02	ci left: 1.345746e-03	ci right 1.482143e-03	k: 1667	n:1180000
Cons ci ratio: 1.242996e-05	ci left: 9.999812e-01	ci right 9.999941e-01	k: 1179987	n:1180000
KS ci ratio: 2.077282e-01	ci left: 2.703663e-04	ci right 3.338236e-04	k: 355	n:1180000
ZNF443   1180000 perm   741 sec   (1593 perm/sec)   p_kst 3.008475e-04   p_cons 9.999890e-01   p_joint 1.412712e-03

Joint ci ratio: 9.542853e-02	ci left: 1.348382e-03	ci right 1.484316e-03	k: 1684	n:1190000
Cons ci ratio: 1.275812e-05	ci left: 9.999803e-01	ci right 9.999936e-01	k: 1189986	n:1190000
KS ci ratio: 2.062844e-01	ci left: 2.720782e-04	ci right 3.354375e-04	k: 360	n:1190000
ZNF443   1190000 perm   751 sec   (1584 perm/sec)   p_kst 3.025210e-04   p_cons 9.999882e-01   p_joint 1.415126e-03

Joint ci ratio: 9.495064e-02	ci left: 1.350975e-03	ci right 1.486450e-03	k: 1701	n:1200000
Cons ci ratio: 1.265180e-05	ci left: 9.999804e-01	ci right 9.999936e-01	k: 1199986	n:1200000
KS ci ratio: 2.054326e-01	ci left: 2.721821e-04	ci right 3.352709e-04	k: 363	n:1200000
ZNF443   1200000 perm   761 sec   (1576 perm/sec)   p_kst 3.025000e-04   p_cons 9.999883e-01   p_joint 1.417500e-03

Joint ci ratio: 9.459013e-02	ci left: 1.350299e-03	ci right 1.485164e-03	k: 1714	n:1210000
Cons ci ratio: 1.254724e-05	ci left: 9.999806e-01	ci right 9.999937e-01	k: 1209986	n:1210000
KS ci ratio: 2.048706e-01	ci left: 2.715006e-04	ci right 3.342378e-04	k: 365	n:1210000
ZNF443   1210000 perm   777 sec   (1557 perm/sec)   p_kst 3.016529e-04   p_cons 9.999884e-01   p_joint 1.416529e-03

Joint ci ratio: 9.420640e-02	ci left: 1.350435e-03	ci right 1.484737e-03	k: 1728	n:1220000
Cons ci ratio: 1.244439e-05	ci left: 9.999807e-01	ci right 9.999937e-01	k: 1219986	n:1220000
KS ci ratio: 2.040361e-01	ci left: 2.716083e-04	ci right 3.340829e-04	k: 368	n:1220000
ZNF443   1220000 perm   788 sec   (1549 perm/sec)   p_kst 3.016393e-04   p_cons 9.999885e-01   p_joint 1.416393e-03

Joint ci ratio: 9.005152e-02	ci left: 1.468928e-03	ci right 1.608232e-03	k: 1891	n:1230000
Cons ci ratio: 1.234322e-05	ci left: 9.999809e-01	ci right 9.999938e-01	k: 1229986	n:1230000
KS ci ratio: 2.037604e-01	ci left: 2.701716e-04	ci right 3.322212e-04	k: 369	n:1230000
ZNF443   1230000 perm   798 sec   (1541 perm/sec)   p_kst 3.000000e-04   p_cons 9.999886e-01   p_joint 1.537398e-03

Joint ci ratio: 8.964960e-02	ci left: 1.470484e-03	ci right 1.609280e-03	k: 1908	n:1240000
Cons ci ratio: 1.224367e-05	ci left: 9.999811e-01	ci right 9.999938e-01	k: 1239986	n:1240000
KS ci ratio: 2.029393e-01	ci left: 2.702890e-04	ci right 3.320844e-04	k: 372	n:1240000
ZNF443   1240000 perm   809 sec   (1534 perm/sec)   p_kst 3.000000e-04   p_cons 9.999887e-01   p_joint 1.538710e-03

Joint ci ratio: 8.927623e-02	ci left: 1.471234e-03	ci right 1.609492e-03	k: 1924	n:1250000
Cons ci ratio: 1.214572e-05	ci left: 9.999812e-01	ci right 9.999939e-01	k: 1249986	n:1250000
KS ci ratio: 2.023975e-01	ci left: 2.696454e-04	ci right 3.311088e-04	k: 374	n:1250000
ZNF443   1250000 perm   819 sec   (1525 perm/sec)   p_kst 2.992000e-04   p_cons 9.999888e-01   p_joint 1.539200e-03

Joint ci ratio: 9.342719e-02	ci left: 1.330039e-03	ci right 1.461159e-03	k: 1757	n:1260000
Cons ci ratio: 1.204933e-05	ci left: 9.999814e-01	ci right 9.999939e-01	k: 1259986	n:1260000
KS ci ratio: 2.074389e-01	ci left: 2.539524e-04	ci right 3.134636e-04	k: 356	n:1260000
ZNF443   1260000 perm   830 sec   (1518 perm/sec)   p_kst 2.825397e-04   p_cons 9.999889e-01   p_joint 1.394444e-03

Joint ci ratio: 9.311002e-02	ci left: 1.328795e-03	ci right 1.459323e-03	k: 1769	n:1270000
Cons ci ratio: 1.195445e-05	ci left: 9.999815e-01	ci right 9.999940e-01	k: 1269986	n:1270000
KS ci ratio: 2.068604e-01	ci left: 2.534459e-04	ci right 3.126518e-04	k: 358	n:1270000
ZNF443   1270000 perm   842 sec   (1509 perm/sec)   p_kst 2.818898e-04   p_cons 9.999890e-01   p_joint 1.392913e-03

Joint ci ratio: 9.269194e-02	ci left: 1.330623e-03	ci right 1.460712e-03	k: 1785	n:1280000
Cons ci ratio: 1.225005e-05	ci left: 9.999807e-01	ci right 9.999934e-01	k: 1279985	n:1280000
KS ci ratio: 2.060014e-01	ci left: 2.536884e-04	ci right 3.126740e-04	k: 361	n:1280000
ZNF443   1280000 perm   853 sec   (1501 perm/sec)   p_kst 2.820313e-04   p_cons 9.999883e-01   p_joint 1.394531e-03

Joint ci ratio: 9.222820e-02	ci left: 1.333939e-03	ci right 1.463665e-03	k: 1803	n:1290000
Cons ci ratio: 1.215509e-05	ci left: 9.999808e-01	ci right 9.999935e-01	k: 1289985	n:1290000
KS ci ratio: 2.054348e-01	ci left: 2.531924e-04	ci right 3.118803e-04	k: 363	n:1290000
ZNF443   1290000 perm   863 sec   (1494 perm/sec)   p_kst 2.813953e-04   p_cons 9.999884e-01   p_joint 1.397674e-03

Joint ci ratio: 9.197378e-02	ci left: 1.331193e-03	ci right 1.460275e-03	k: 1813	n:1300000
Cons ci ratio: 1.206159e-05	ci left: 9.999810e-01	ci right 9.999935e-01	k: 1299985	n:1300000
KS ci ratio: 2.051533e-01	ci left: 2.519744e-04	ci right 3.102899e-04	k: 364	n:1300000
ZNF443   1300000 perm   875 sec   (1486 perm/sec)   p_kst 2.800000e-04   p_cons 9.999885e-01   p_joint 1.394615e-03

Joint ci ratio: 9.149569e-02	ci left: 1.335203e-03	ci right 1.463964e-03	k: 1832	n:1310000
Cons ci ratio: 1.196952e-05	ci left: 9.999811e-01	ci right 9.999936e-01	k: 1309985	n:1310000
KS ci ratio: 2.048730e-01	ci left: 2.507751e-04	ci right 3.087238e-04	k: 365	n:1310000
ZNF443   1310000 perm   886 sec   (1479 perm/sec)   p_kst 2.786260e-04   p_cons 9.999885e-01   p_joint 1.398473e-03

Joint ci ratio: 9.129688e-02	ci left: 1.331010e-03	ci right 1.459073e-03	k: 1840	n:1320000
Cons ci ratio: 1.187884e-05	ci left: 9.999813e-01	ci right 9.999936e-01	k: 1319985	n:1320000
KS ci ratio: 2.037625e-01	ci left: 2.517506e-04	ci right 3.095701e-04	k: 369	n:1320000
ZNF443   1320000 perm   897 sec   (1472 perm/sec)   p_kst 2.795455e-04   p_cons 9.999886e-01   p_joint 1.393939e-03

Joint ci ratio: 9.144671e-02	ci left: 1.316593e-03	ci right 1.443489e-03	k: 1834	n:1330000
Cons ci ratio: 1.178952e-05	ci left: 9.999814e-01	ci right 9.999937e-01	k: 1329985	n:1330000
KS ci ratio: 2.023993e-01	ci left: 2.534260e-04	ci right 3.111928e-04	k: 374	n:1330000
ZNF443   1330000 perm   909 sec   (1464 perm/sec)   p_kst 2.812030e-04   p_cons 9.999887e-01   p_joint 1.378947e-03

Joint ci ratio: 8.960777e-02	ci left: 1.362202e-03	ci right 1.490715e-03	k: 1910	n:1340000
Cons ci ratio: 1.206168e-05	ci left: 9.999806e-01	ci right 9.999932e-01	k: 1339984	n:1340000
KS ci ratio: 2.015945e-01	ci left: 2.536603e-04	ci right 3.112224e-04	k: 377	n:1340000
ZNF443   1340000 perm   920 sec   (1456 perm/sec)   p_kst 2.813433e-04   p_cons 9.999881e-01   p_joint 1.425373e-03

Joint ci ratio: 8.918859e-02	ci left: 1.365147e-03	ci right 1.493304e-03	k: 1928	n:1350000
Cons ci ratio: 1.197233e-05	ci left: 9.999808e-01	ci right 9.999932e-01	k: 1349984	n:1350000
KS ci ratio: 2.005362e-01	ci left: 2.545951e-04	ci right 3.120289e-04	k: 381	n:1350000
ZNF443   1350000 perm   931 sec   (1449 perm/sec)   p_kst 2.822222e-04   p_cons 9.999881e-01   p_joint 1.428148e-03

Joint ci ratio: 8.888961e-02	ci left: 1.364455e-03	ci right 1.492095e-03	k: 1941	n:1360000
Cons ci ratio: 1.188430e-05	ci left: 9.999809e-01	ci right 9.999933e-01	k: 1359984	n:1360000
KS ci ratio: 1.997533e-01	ci left: 2.548185e-04	ci right 3.120509e-04	k: 384	n:1360000
ZNF443   1360000 perm   943 sec   (1442 perm/sec)   p_kst 2.823529e-04   p_cons 9.999882e-01   p_joint 1.427206e-03

Joint ci ratio: 8.891300e-02	ci left: 1.353782e-03	ci right 1.480458e-03	k: 1940	n:1370000
Cons ci ratio: 1.179755e-05	ci left: 9.999810e-01	ci right 9.999933e-01	k: 1369984	n:1370000
KS ci ratio: 1.992366e-01	ci left: 2.543454e-04	ci right 3.113058e-04	k: 386	n:1370000
ZNF443   1370000 perm   955 sec   (1435 perm/sec)   p_kst 2.817518e-04   p_cons 9.999883e-01   p_joint 1.416058e-03

Joint ci ratio: 8.507151e-02	ci left: 1.470865e-03	ci right 1.602256e-03	k: 2119	n:1380000
Cons ci ratio: 1.171206e-05	ci left: 9.999812e-01	ci right 9.999934e-01	k: 1379984	n:1380000
KS ci ratio: 1.982148e-01	ci left: 2.552567e-04	ci right 3.120925e-04	k: 390	n:1380000
ZNF443   1380000 perm   966 sec   (1428 perm/sec)   p_kst 2.826087e-04   p_cons 9.999884e-01   p_joint 1.535507e-03

Joint ci ratio: 8.479204e-02	ci left: 1.470141e-03	ci right 1.601015e-03	k: 2133	n:1390000
Cons ci ratio: 1.162780e-05	ci left: 9.999813e-01	ci right 9.999934e-01	k: 1389984	n:1390000
KS ci ratio: 1.977098e-01	ci left: 2.547878e-04	ci right 3.113574e-04	k: 392	n:1390000
ZNF443   1390000 perm   978 sec   (1421 perm/sec)   p_kst 2.820144e-04   p_cons 9.999885e-01   p_joint 1.534532e-03

Joint ci ratio: 8.441696e-02	ci left: 1.472925e-03	ci right 1.603437e-03	k: 2152	n:1400000
Cons ci ratio: 1.154475e-05	ci left: 9.999814e-01	ci right 9.999935e-01	k: 1399984	n:1400000
KS ci ratio: 1.969595e-01	ci left: 2.550049e-04	ci right 3.113820e-04	k: 395	n:1400000
ZNF443   1400000 perm   990 sec   (1414 perm/sec)   p_kst 2.821429e-04   p_cons 9.999886e-01   p_joint 1.537143e-03

Joint ci ratio: 8.416332e-02	ci left: 1.471504e-03	ci right 1.601480e-03	k: 2165	n:1410000
Cons ci ratio: 1.146287e-05	ci left: 9.999816e-01	ci right 9.999935e-01	k: 1409984	n:1410000
KS ci ratio: 1.964640e-01	ci left: 2.545449e-04	ci right 3.106618e-04	k: 397	n:1410000
ZNF443   1410000 perm   1002 sec   (1407 perm/sec)   p_kst 2.815603e-04   p_cons 9.999887e-01   p_joint 1.535461e-03

Joint ci ratio: 8.387341e-02	ci left: 1.471482e-03	ci right 1.600987e-03	k: 2180	n:1420000
Cons ci ratio: 1.138214e-05	ci left: 9.999817e-01	ci right 9.999936e-01	k: 1419984	n:1420000
KS ci ratio: 1.962178e-01	ci left: 2.534219e-04	ci right 3.092129e-04	k: 398	n:1420000
ZNF443   1420000 perm   1015 sec   (1399 perm/sec)   p_kst 2.802817e-04   p_cons 9.999887e-01   p_joint 1.535211e-03

Joint ci ratio: 8.503364e-02	ci left: 1.420803e-03	ci right 1.547663e-03	k: 2121	n:1430000
Cons ci ratio: 1.130255e-05	ci left: 9.999818e-01	ci right 9.999936e-01	k: 1429984	n:1430000
KS ci ratio: 1.959725e-01	ci left: 2.523147e-04	ci right 3.077842e-04	k: 399	n:1430000
ZNF443   1430000 perm   1027 sec   (1393 perm/sec)   p_kst 2.790210e-04   p_cons 9.999888e-01   p_joint 1.483217e-03

Joint ci ratio: 8.515473e-02	ci left: 1.406858e-03	ci right 1.532660e-03	k: 2115	n:1440000
Cons ci ratio: 1.122406e-05	ci left: 9.999820e-01	ci right 9.999936e-01	k: 1439984	n:1440000
KS ci ratio: 1.954845e-01	ci left: 2.518833e-04	ci right 3.071036e-04	k: 401	n:1440000
ZNF443   1440000 perm   1039 sec   (1385 perm/sec)   p_kst 2.784722e-04   p_cons 9.999889e-01   p_joint 1.468750e-03

Joint ci ratio: 8.479474e-02	ci left: 1.409306e-03	ci right 1.534768e-03	k: 2133	n:1450000
Cons ci ratio: 1.146981e-05	ci left: 9.999812e-01	ci right 9.999932e-01	k: 1449983	n:1450000
KS ci ratio: 1.950001e-01	ci left: 2.514581e-04	ci right 3.064323e-04	k: 403	n:1450000
ZNF443   1450000 perm   1052 sec   (1379 perm/sec)   p_kst 2.779310e-04   p_cons 9.999883e-01   p_joint 1.471034e-03

Joint ci ratio: 8.457714e-02	ci left: 1.407028e-03	ci right 1.531950e-03	k: 2144	n:1460000
Cons ci ratio: 1.139125e-05	ci left: 9.999814e-01	ci right 9.999932e-01	k: 1459983	n:1460000
KS ci ratio: 1.942800e-01	ci left: 2.516905e-04	ci right 3.064883e-04	k: 406	n:1460000
ZNF443   1460000 perm   1064 sec   (1372 perm/sec)   p_kst 2.780822e-04   p_cons 9.999884e-01   p_joint 1.468493e-03

Joint ci ratio: 8.434163e-02	ci left: 1.405447e-03	ci right 1.529864e-03	k: 2156	n:1470000
Cons ci ratio: 1.131376e-05	ci left: 9.999815e-01	ci right 9.999933e-01	k: 1469983	n:1470000
KS ci ratio: 1.938045e-01	ci left: 2.512727e-04	ci right 3.058299e-04	k: 408	n:1470000
ZNF443   1470000 perm   1077 sec   (1365 perm/sec)   p_kst 2.775510e-04   p_cons 9.999884e-01   p_joint 1.466667e-03

Joint ci ratio: 8.408866e-02	ci left: 1.404549e-03	ci right 1.528496e-03	k: 2169	n:1480000
Cons ci ratio: 1.123731e-05	ci left: 9.999816e-01	ci right 9.999933e-01	k: 1479983	n:1480000
KS ci ratio: 1.930976e-01	ci left: 2.515038e-04	ci right 3.058886e-04	k: 411	n:1480000
ZNF443   1480000 perm   1089 sec   (1359 perm/sec)   p_kst 2.777027e-04   p_cons 9.999885e-01   p_joint 1.465541e-03

Joint ci ratio: 8.379952e-02	ci left: 1.404979e-03	ci right 1.528516e-03	k: 2184	n:1490000
Cons ci ratio: 1.116190e-05	ci left: 9.999817e-01	ci right 9.999934e-01	k: 1489983	n:1490000
KS ci ratio: 1.923984e-01	ci left: 2.517321e-04	ci right 3.059461e-04	k: 414	n:1490000
ZNF443   1490000 perm   1102 sec   (1352 perm/sec)   p_kst 2.778523e-04   p_cons 9.999886e-01   p_joint 1.465772e-03

Joint ci ratio: 8.345638e-02	ci left: 1.407361e-03	ci right 1.530576e-03	k: 2202	n:1500000
Cons ci ratio: 1.108748e-05	ci left: 9.999819e-01	ci right 9.999934e-01	k: 1499983	n:1500000
KS ci ratio: 1.917067e-01	ci left: 2.519577e-04	ci right 3.060025e-04	k: 417	n:1500000
ZNF443   1500000 perm   1115 sec   (1346 perm/sec)   p_kst 2.780000e-04   p_cons 9.999887e-01   p_joint 1.468000e-03

Joint ci ratio: 8.309868e-02	ci left: 1.410362e-03	ci right 1.533285e-03	k: 2221	n:1510000
Cons ci ratio: 1.101406e-05	ci left: 9.999820e-01	ci right 9.999934e-01	k: 1509983	n:1510000
KS ci ratio: 1.901211e-01	ci left: 2.547034e-04	ci right 3.088330e-04	k: 424	n:1510000
ZNF443   1510000 perm   1127 sec   (1340 perm/sec)   p_kst 2.807947e-04   p_cons 9.999887e-01   p_joint 1.470861e-03

Joint ci ratio: 7.494360e-02	ci left: 1.729362e-03	ci right 1.864653e-03	k: 2730	n:1520000
Cons ci ratio: 1.094159e-05	ci left: 9.999821e-01	ci right 9.999935e-01	k: 1519983	n:1520000
KS ci ratio: 1.892326e-01	ci left: 2.555343e-04	ci right 3.095576e-04	k: 428	n:1520000
ZNF443   1520000 perm   1140 sec   (1334 perm/sec)   p_kst 2.815789e-04   p_cons 9.999888e-01   p_joint 1.796053e-03

Joint ci ratio: 7.499909e-02	ci left: 1.715493e-03	ci right 1.849803e-03	k: 2726	n:1530000
Cons ci ratio: 1.087008e-05	ci left: 9.999822e-01	ci right 9.999935e-01	k: 1529983	n:1530000
KS ci ratio: 1.885744e-01	ci left: 2.557322e-04	ci right 3.095877e-04	k: 431	n:1530000
ZNF443   1530000 perm   1156 sec   (1324 perm/sec)   p_kst 2.816993e-04   p_cons 9.999889e-01   p_joint 1.781699e-03

Joint ci ratio: 7.472551e-02	ci left: 1.717098e-03	ci right 1.851021e-03	k: 2746	n:1540000
Cons ci ratio: 1.079949e-05	ci left: 9.999823e-01	ci right 9.999936e-01	k: 1539983	n:1540000
KS ci ratio: 1.877073e-01	ci left: 2.565467e-04	ci right 3.102970e-04	k: 435	n:1540000
ZNF443   1540000 perm   1168 sec   (1318 perm/sec)   p_kst 2.824675e-04   p_cons 9.999890e-01   p_joint 1.783117e-03

Joint ci ratio: 7.446839e-02	ci left: 1.718049e-03	ci right 1.851566e-03	k: 2765	n:1550000
Cons ci ratio: 1.072982e-05	ci left: 9.999824e-01	ci right 9.999936e-01	k: 1549983	n:1550000
KS ci ratio: 1.870648e-01	ci left: 2.567363e-04	ci right 3.103212e-04	k: 438	n:1550000
ZNF443   1550000 perm   1181 sec   (1312 perm/sec)   p_kst 2.825806e-04   p_cons 9.999890e-01   p_joint 1.783871e-03

Joint ci ratio: 7.426736e-02	ci left: 1.716472e-03	ci right 1.849491e-03	k: 2780	n:1560000
Cons ci ratio: 1.066104e-05	ci left: 9.999826e-01	ci right 9.999937e-01	k: 1559983	n:1560000
KS ci ratio: 1.868523e-01	ci left: 2.557015e-04	ci right 3.090030e-04	k: 439	n:1560000
ZNF443   1560000 perm   1194 sec   (1307 perm/sec)   p_kst 2.814103e-04   p_cons 9.999891e-01   p_joint 1.782051e-03

Joint ci ratio: 7.397523e-02	ci left: 1.719293e-03	ci right 1.851983e-03	k: 2802	n:1570000
Cons ci ratio: 1.059313e-05	ci left: 9.999827e-01	ci right 9.999937e-01	k: 1569983	n:1570000
KS ci ratio: 1.864291e-01	ci left: 2.552872e-04	ci right 3.083682e-04	k: 441	n:1570000
ZNF443   1570000 perm   1207 sec   (1301 perm/sec)   p_kst 2.808917e-04   p_cons 9.999892e-01   p_joint 1.784713e-03

Joint ci ratio: 7.501499e-02	ci left: 1.660583e-03	ci right 1.790622e-03	k: 2725	n:1580000
Cons ci ratio: 1.052609e-05	ci left: 9.999828e-01	ci right 9.999937e-01	k: 1579983	n:1580000
KS ci ratio: 1.860088e-01	ci left: 2.548783e-04	ci right 3.077413e-04	k: 443	n:1580000
ZNF443   1580000 perm   1220 sec   (1295 perm/sec)   p_kst 2.803797e-04   p_cons 9.999892e-01   p_joint 1.724684e-03

Joint ci ratio: 7.475488e-02	ci left: 1.661865e-03	ci right 1.791533e-03	k: 2744	n:1590000
Cons ci ratio: 1.045989e-05	ci left: 9.999829e-01	ci right 9.999938e-01	k: 1589983	n:1590000
KS ci ratio: 1.851764e-01	ci left: 2.556741e-04	ci right 3.084382e-04	k: 447	n:1590000
ZNF443   1590000 perm   1233 sec   (1289 perm/sec)   p_kst 2.811321e-04   p_cons 9.999893e-01   p_joint 1.725786e-03

Joint ci ratio: 7.444352e-02	ci left: 1.665585e-03	ci right 1.794979e-03	k: 2767	n:1600000
Cons ci ratio: 1.039451e-05	ci left: 9.999830e-01	ci right 9.999938e-01	k: 1599983	n:1600000
KS ci ratio: 1.841515e-01	ci left: 2.570567e-04	ci right 3.097798e-04	k: 452	n:1600000
ZNF443   1600000 perm   1246 sec   (1284 perm/sec)   p_kst 2.825000e-04   p_cons 9.999894e-01   p_joint 1.729375e-03

Joint ci ratio: 7.478298e-02	ci left: 1.640001e-03	ci right 1.768014e-03	k: 2742	n:1610000
Cons ci ratio: 1.032995e-05	ci left: 9.999831e-01	ci right 9.999938e-01	k: 1609983	n:1610000
KS ci ratio: 1.841517e-01	ci left: 2.554601e-04	ci right 3.078557e-04	k: 452	n:1610000
ZNF443   1610000 perm   1260 sec   (1278 perm/sec)   p_kst 2.807453e-04   p_cons 9.999894e-01   p_joint 1.703106e-03

Joint ci ratio: 7.492029e-02	ci left: 1.623820e-03	ci right 1.750812e-03	k: 2732	n:1620000
Cons ci ratio: 1.026618e-05	ci left: 9.999832e-01	ci right 9.999939e-01	k: 1619983	n:1620000
KS ci ratio: 1.829440e-01	ci left: 2.574167e-04	ci right 3.098290e-04	k: 458	n:1620000
ZNF443   1620000 perm   1273 sec   (1272 perm/sec)   p_kst 2.827160e-04   p_cons 9.999895e-01   p_joint 1.686420e-03

Joint ci ratio: 7.467476e-02	ci left: 1.624694e-03	ci right 1.751320e-03	k: 2750	n:1630000
Cons ci ratio: 1.020320e-05	ci left: 9.999833e-01	ci right 9.999939e-01	k: 1629983	n:1630000
KS ci ratio: 1.821519e-01	ci left: 2.581794e-04	ci right 3.104942e-04	k: 462	n:1630000
ZNF443   1630000 perm   1288 sec   (1266 perm/sec)   p_kst 2.834356e-04   p_cons 9.999896e-01   p_joint 1.687117e-03

Joint ci ratio: 7.437783e-02	ci left: 1.627952e-03	ci right 1.754306e-03	k: 2772	n:1640000
Cons ci ratio: 1.041888e-05	ci left: 9.999827e-01	ci right 9.999935e-01	k: 1639982	n:1640000
KS ci ratio: 1.813701e-01	ci left: 2.589332e-04	ci right 3.111508e-04	k: 466	n:1640000
ZNF443   1640000 perm   1313 sec   (1249 perm/sec)   p_kst 2.841463e-04   p_cons 9.999890e-01   p_joint 1.690244e-03

Joint ci ratio: 7.436479e-02	ci left: 1.618680e-03	ci right 1.744292e-03	k: 2773	n:1650000
Cons ci ratio: 1.035573e-05	ci left: 9.999828e-01	ci right 9.999935e-01	k: 1649982	n:1650000
KS ci ratio: 1.805982e-01	ci left: 2.596783e-04	ci right 3.117990e-04	k: 470	n:1650000
ZNF443   1650000 perm   1326 sec   (1244 perm/sec)   p_kst 2.848485e-04   p_cons 9.999891e-01   p_joint 1.680606e-03

Joint ci ratio: 7.412466e-02	ci left: 1.619571e-03	ci right 1.744828e-03	k: 2791	n:1660000
Cons ci ratio: 1.029335e-05	ci left: 9.999829e-01	ci right 9.999936e-01	k: 1659982	n:1660000
KS ci ratio: 1.800258e-01	ci left: 2.598396e-04	ci right 3.118094e-04	k: 473	n:1660000
ZNF443   1660000 perm   1339 sec   (1239 perm/sec)   p_kst 2.849398e-04   p_cons 9.999892e-01   p_joint 1.681325e-03

Joint ci ratio: 7.387367e-02	ci left: 1.621040e-03	ci right 1.745968e-03	k: 2810	n:1670000
Cons ci ratio: 1.023171e-05	ci left: 9.999830e-01	ci right 9.999936e-01	k: 1669982	n:1670000
KS ci ratio: 1.790836e-01	ci left: 2.611432e-04	ci right 3.130707e-04	k: 478	n:1670000
ZNF443   1670000 perm   1353 sec   (1234 perm/sec)   p_kst 2.862275e-04   p_cons 9.999892e-01   p_joint 1.682635e-03

Joint ci ratio: 7.367740e-02	ci left: 1.620155e-03	ci right 1.744669e-03	k: 2825	n:1680000
Cons ci ratio: 1.017081e-05	ci left: 9.999831e-01	ci right 9.999937e-01	k: 1679982	n:1680000
KS ci ratio: 1.781561e-01	ci left: 2.624319e-04	ci right 3.143163e-04	k: 483	n:1680000
ZNF443   1680000 perm   1368 sec   (1228 perm/sec)   p_kst 2.875000e-04   p_cons 9.999893e-01   p_joint 1.681548e-03

Joint ci ratio: 7.340508e-02	ci left: 1.622765e-03	ci right 1.747000e-03	k: 2846	n:1690000
Cons ci ratio: 1.011062e-05	ci left: 9.999832e-01	ci right 9.999937e-01	k: 1689982	n:1690000
KS ci ratio: 1.776065e-01	ci left: 2.625752e-04	ci right 3.143105e-04	k: 486	n:1690000
ZNF443   1690000 perm   1382 sec   (1223 perm/sec)   p_kst 2.875740e-04   p_cons 9.999893e-01   p_joint 1.684024e-03

Joint ci ratio: 7.370426e-02	ci left: 1.599939e-03	ci right 1.722946e-03	k: 2823	n:1700000
Cons ci ratio: 1.005115e-05	ci left: 9.999833e-01	ci right 9.999937e-01	k: 1699982	n:1700000
KS ci ratio: 1.772430e-01	ci left: 2.621548e-04	ci right 3.136903e-04	k: 488	n:1700000
ZNF443   1700000 perm   1396 sec   (1218 perm/sec)   p_kst 2.870588e-04   p_cons 9.999894e-01   p_joint 1.660588e-03

Joint ci ratio: 7.350932e-02	ci left: 1.599193e-03	ci right 1.721803e-03	k: 2838	n:1710000
Cons ci ratio: 9.992371e-06	ci left: 9.999834e-01	ci right 9.999938e-01	k: 1709982	n:1710000
KS ci ratio: 1.768817e-01	ci left: 2.617395e-04	ci right 3.130772e-04	k: 490	n:1710000
ZNF443   1710000 perm   1410 sec   (1213 perm/sec)   p_kst 2.865497e-04   p_cons 9.999895e-01   p_joint 1.659649e-03

Joint ci ratio: 7.330307e-02	ci left: 1.599027e-03	ci right 1.721266e-03	k: 2854	n:1720000
Cons ci ratio: 9.934275e-06	ci left: 9.999835e-01	ci right 9.999938e-01	k: 1719982	n:1720000
KS ci ratio: 1.765226e-01	ci left: 2.613291e-04	ci right 3.124712e-04	k: 492	n:1720000
ZNF443   1720000 perm   1424 sec   (1207 perm/sec)   p_kst 2.860465e-04   p_cons 9.999895e-01   p_joint 1.659302e-03

Joint ci ratio: 7.300944e-02	ci left: 1.602835e-03	ci right 1.724854e-03	k: 2877	n:1730000
Cons ci ratio: 9.876851e-06	ci left: 9.999836e-01	ci right 9.999938e-01	k: 1729982	n:1730000
KS ci ratio: 1.759879e-01	ci left: 2.614762e-04	ci right 3.124755e-04	k: 495	n:1730000
ZNF443   1730000 perm   1439 sec   (1202 perm/sec)   p_kst 2.861272e-04   p_cons 9.999896e-01   p_joint 1.663006e-03

Joint ci ratio: 7.400815e-02	ci left: 1.550183e-03	ci right 1.669877e-03	k: 2800	n:1740000
Cons ci ratio: 9.820088e-06	ci left: 9.999837e-01	ci right 9.999939e-01	k: 1739982	n:1740000
KS ci ratio: 1.752825e-01	ci left: 2.621712e-04	ci right 3.130795e-04	k: 499	n:1740000
ZNF443   1740000 perm   1453 sec   (1197 perm/sec)   p_kst 2.867816e-04   p_cons 9.999897e-01   p_joint 1.609195e-03

Joint ci ratio: 7.374525e-02	ci left: 1.552542e-03	ci right 1.671974e-03	k: 2820	n:1750000
Cons ci ratio: 9.763973e-06	ci left: 9.999837e-01	ci right 9.999939e-01	k: 1749982	n:1750000
KS ci ratio: 1.747590e-01	ci left: 2.623123e-04	ci right 3.130798e-04	k: 502	n:1750000
ZNF443   1750000 perm   1468 sec   (1192 perm/sec)   p_kst 2.868571e-04   p_cons 9.999897e-01   p_joint 1.611429e-03

Joint ci ratio: 7.450332e-02	ci left: 1.511933e-03	ci right 1.629489e-03	k: 2763	n:1760000
Cons ci ratio: 9.708495e-06	ci left: 9.999838e-01	ci right 9.999939e-01	k: 1759982	n:1760000
KS ci ratio: 1.737258e-01	ci left: 2.640823e-04	ci right 3.148585e-04	k: 508	n:1760000
ZNF443   1760000 perm   1482 sec   (1188 perm/sec)   p_kst 2.886364e-04   p_cons 9.999898e-01   p_joint 1.569886e-03

Joint ci ratio: 6.967138e-02	ci left: 1.723098e-03	ci right 1.848033e-03	k: 3159	n:1770000
Cons ci ratio: 9.653645e-06	ci left: 9.999839e-01	ci right 9.999940e-01	k: 1769982	n:1770000
KS ci ratio: 1.727107e-01	ci left: 2.658332e-04	ci right 3.166162e-04	k: 514	n:1770000
ZNF443   1770000 perm   1496 sec   (1183 perm/sec)   p_kst 2.903955e-04   p_cons 9.999898e-01   p_joint 1.784746e-03

Joint ci ratio: 6.968277e-02	ci left: 1.712865e-03	ci right 1.837079e-03	k: 3158	n:1780000
Cons ci ratio: 9.599411e-06	ci left: 9.999840e-01	ci right 9.999940e-01	k: 1779982	n:1780000
KS ci ratio: 1.723763e-01	ci left: 2.654148e-04	ci right 3.160096e-04	k: 516	n:1780000
ZNF443   1780000 perm   1511 sec   (1178 perm/sec)   p_kst 2.898876e-04   p_cons 9.999899e-01   p_joint 1.774157e-03

Joint ci ratio: 6.958389e-02	ci left: 1.708237e-03	ci right 1.831932e-03	k: 3167	n:1790000
Cons ci ratio: 9.545783e-06	ci left: 9.999841e-01	ci right 9.999940e-01	k: 1789982	n:1790000
KS ci ratio: 1.718784e-01	ci left: 2.655359e-04	ci right 3.159923e-04	k: 519	n:1790000
ZNF443   1790000 perm   1526 sec   (1173 perm/sec)   p_kst 2.899441e-04   p_cons 9.999899e-01   p_joint 1.769274e-03

Joint ci ratio: 6.959524e-02	ci left: 1.698200e-03	ci right 1.821189e-03	k: 3166	n:1800000
Cons ci ratio: 9.492750e-06	ci left: 9.999842e-01	ci right 9.999941e-01	k: 1799982	n:1800000
KS ci ratio: 1.715488e-01	ci left: 2.651240e-04	ci right 3.153956e-04	k: 521	n:1800000
ZNF443   1800000 perm   1540 sec   (1169 perm/sec)   p_kst 2.894444e-04   p_cons 9.999900e-01   p_joint 1.758889e-03

Joint ci ratio: 6.978345e-02	ci left: 1.679589e-03	ci right 1.801572e-03	k: 3149	n:1810000
Cons ci ratio: 9.440304e-06	ci left: 9.999843e-01	ci right 9.999941e-01	k: 1809982	n:1810000
KS ci ratio: 1.708952e-01	ci left: 2.657745e-04	ci right 3.159576e-04	k: 525	n:1810000
ZNF443   1810000 perm   1555 sec   (1164 perm/sec)   p_kst 2.900552e-04   p_cons 9.999901e-01   p_joint 1.739779e-03

Joint ci ratio: 6.987272e-02	ci left: 1.666041e-03	ci right 1.787202e-03	k: 3141	n:1820000
Cons ci ratio: 9.388434e-06	ci left: 9.999844e-01	ci right 9.999941e-01	k: 1819982	n:1820000
KS ci ratio: 1.708954e-01	ci left: 2.643142e-04	ci right 3.142216e-04	k: 525	n:1820000
ZNF443   1820000 perm   1570 sec   (1159 perm/sec)   p_kst 2.884615e-04   p_cons 9.999901e-01   p_joint 1.725824e-03

Joint ci ratio: 6.968446e-02	ci left: 1.666065e-03	ci right 1.786887e-03	k: 3158	n:1830000
Cons ci ratio: 9.337131e-06	ci left: 9.999845e-01	ci right 9.999942e-01	k: 1829982	n:1830000
KS ci ratio: 1.705714e-01	ci left: 2.639160e-04	ci right 3.136441e-04	k: 527	n:1830000
ZNF443   1830000 perm   1585 sec   (1155 perm/sec)   p_kst 2.879781e-04   p_cons 9.999902e-01   p_joint 1.725683e-03

Joint ci ratio: 6.985111e-02	ci left: 1.648999e-03	ci right 1.768882e-03	k: 3143	n:1840000
Cons ci ratio: 9.286385e-06	ci left: 9.999845e-01	ci right 9.999942e-01	k: 1839982	n:1840000
KS ci ratio: 1.700889e-01	ci left: 2.640426e-04	ci right 3.136394e-04	k: 530	n:1840000
ZNF443   1840000 perm   1600 sec   (1150 perm/sec)   p_kst 2.880435e-04   p_cons 9.999902e-01   p_joint 1.708152e-03

Joint ci ratio: 6.960790e-02	ci left: 1.651770e-03	ci right 1.771420e-03	k: 3165	n:1850000
Cons ci ratio: 9.236188e-06	ci left: 9.999846e-01	ci right 9.999942e-01	k: 1849982	n:1850000
KS ci ratio: 1.692936e-01	ci left: 2.652033e-04	ci right 3.147614e-04	k: 535	n:1850000
ZNF443   1850000 perm   1615 sec   (1146 perm/sec)   p_kst 2.891892e-04   p_cons 9.999903e-01   p_joint 1.710811e-03

Joint ci ratio: 6.937812e-02	ci left: 1.653984e-03	ci right 1.773382e-03	k: 3186	n:1860000
Cons ci ratio: 9.186531e-06	ci left: 9.999847e-01	ci right 9.999943e-01	k: 1859982	n:1860000
KS ci ratio: 1.688218e-01	ci left: 2.653221e-04	ci right 3.147502e-04	k: 538	n:1860000
ZNF443   1860000 perm   1630 sec   (1141 perm/sec)   p_kst 2.892473e-04   p_cons 9.999903e-01   p_joint 1.712903e-03

Joint ci ratio: 6.955355e-02	ci left: 1.636731e-03	ci right 1.755195e-03	k: 3170	n:1870000
Cons ci ratio: 9.137405e-06	ci left: 9.999848e-01	ci right 9.999943e-01	k: 1869982	n:1870000
KS ci ratio: 1.685095e-01	ci left: 2.649277e-04	ci right 3.141817e-04	k: 540	n:1870000
ZNF443   1870000 perm   1645 sec   (1137 perm/sec)   p_kst 2.887701e-04   p_cons 9.999904e-01   p_joint 1.695187e-03

Joint ci ratio: 6.937875e-02	ci left: 1.636388e-03	ci right 1.754517e-03	k: 3186	n:1880000
Cons ci ratio: 9.088802e-06	ci left: 9.999849e-01	ci right 9.999943e-01	k: 1879982	n:1880000
KS ci ratio: 1.680443e-01	ci left: 2.650470e-04	ci right 3.141734e-04	k: 543	n:1880000
ZNF443   1880000 perm   1661 sec   (1132 perm/sec)   p_kst 2.888298e-04   p_cons 9.999904e-01   p_joint 1.694681e-03

Joint ci ratio: 6.948835e-02	ci left: 1.622530e-03	ci right 1.739852e-03	k: 3176	n:1890000
Cons ci ratio: 9.040713e-06	ci left: 9.999849e-01	ci right 9.999944e-01	k: 1889982	n:1890000
KS ci ratio: 1.678901e-01	ci left: 2.641515e-04	ci right 3.130624e-04	k: 544	n:1890000
ZNF443   1890000 perm   1676 sec   (1128 perm/sec)   p_kst 2.878307e-04   p_cons 9.999905e-01   p_joint 1.680423e-03

Joint ci ratio: 6.932492e-02	ci left: 1.621748e-03	ci right 1.738726e-03	k: 3191	n:1900000
Cons ci ratio: 8.993130e-06	ci left: 9.999850e-01	ci right 9.999944e-01	k: 1899982	n:1900000
KS ci ratio: 1.672773e-01	ci left: 2.647782e-04	ci right 3.136082e-04	k: 548	n:1900000
ZNF443   1900000 perm   1693 sec   (1122 perm/sec)   p_kst 2.884211e-04   p_cons 9.999905e-01   p_joint 1.679474e-03

Joint ci ratio: 6.921671e-02	ci left: 1.618402e-03	ci right 1.734949e-03	k: 3201	n:1910000
Cons ci ratio: 8.946045e-06	ci left: 9.999851e-01	ci right 9.999944e-01	k: 1909982	n:1910000
KS ci ratio: 1.671253e-01	ci left: 2.638936e-04	ci right 3.125118e-04	k: 549	n:1910000
ZNF443   1910000 perm   1708 sec   (1118 perm/sec)   p_kst 2.874346e-04   p_cons 9.999906e-01   p_joint 1.675916e-03

Joint ci ratio: 7.071491e-02	ci left: 1.541400e-03	ci right 1.654903e-03	k: 3067	n:1920000
Cons ci ratio: 8.899451e-06	ci left: 9.999852e-01	ci right 9.999944e-01	k: 1919982	n:1920000
KS ci ratio: 1.665208e-01	ci left: 2.645155e-04	ci right 3.130543e-04	k: 553	n:1920000
ZNF443   1920000 perm   1736 sec   (1106 perm/sec)   p_kst 2.880208e-04   p_cons 9.999906e-01   p_joint 1.597396e-03

Joint ci ratio: 7.049690e-02	ci left: 1.543085e-03	ci right 1.656347e-03	k: 3086	n:1930000
Cons ci ratio: 8.853340e-06	ci left: 9.999853e-01	ci right 9.999945e-01	k: 1929982	n:1930000
KS ci ratio: 1.659228e-01	ci left: 2.651313e-04	ci right 3.135909e-04	k: 557	n:1930000
ZNF443   1930000 perm   1754 sec   (1101 perm/sec)   p_kst 2.886010e-04   p_cons 9.999907e-01   p_joint 1.598964e-03

Joint ci ratio: 7.036035e-02	ci left: 1.541207e-03	ci right 1.654103e-03	k: 3098	n:1940000
Cons ci ratio: 8.807704e-06	ci left: 9.999853e-01	ci right 9.999945e-01	k: 1939982	n:1940000
KS ci ratio: 1.657744e-01	ci left: 2.642587e-04	ci right 3.125113e-04	k: 558	n:1940000
ZNF443   1940000 perm   1769 sec   (1097 perm/sec)   p_kst 2.876289e-04   p_cons 9.999907e-01   p_joint 1.596907e-03

Joint ci ratio: 7.014560e-02	ci left: 1.542876e-03	ci right 1.655536e-03	k: 3117	n:1950000
Cons ci ratio: 8.762536e-06	ci left: 9.999854e-01	ci right 9.999945e-01	k: 1949982	n:1950000
KS ci ratio: 1.654787e-01	ci left: 2.638866e-04	ci right 3.119768e-04	k: 560	n:1950000
ZNF443   1950000 perm   1785 sec   (1093 perm/sec)   p_kst 2.871795e-04   p_cons 9.999908e-01   p_joint 1.598462e-03

Joint ci ratio: 6.997749e-02	ci left: 1.542523e-03	ci right 1.654876e-03	k: 3132	n:1960000
Cons ci ratio: 8.717829e-06	ci left: 9.999855e-01	ci right 9.999946e-01	k: 1959982	n:1960000
KS ci ratio: 1.654788e-01	ci left: 2.625403e-04	ci right 3.103851e-04	k: 560	n:1960000
ZNF443   1960000 perm   1801 sec   (1088 perm/sec)   p_kst 2.857143e-04   p_cons 9.999908e-01   p_joint 1.597959e-03

Joint ci ratio: 6.991076e-02	ci left: 1.537685e-03	ci right 1.649575e-03	k: 3138	n:1970000
Cons ci ratio: 8.673576e-06	ci left: 9.999856e-01	ci right 9.999946e-01	k: 1969982	n:1970000
KS ci ratio: 1.653316e-01	ci left: 2.616942e-04	ci right 3.093382e-04	k: 561	n:1970000
ZNF443   1970000 perm   1817 sec   (1084 perm/sec)   p_kst 2.847716e-04   p_cons 9.999909e-01   p_joint 1.592893e-03

Joint ci ratio: 6.991104e-02	ci left: 1.529919e-03	ci right 1.641244e-03	k: 3138	n:1980000
Cons ci ratio: 8.629770e-06	ci left: 9.999856e-01	ci right 9.999946e-01	k: 1979982	n:1980000
KS ci ratio: 1.651848e-01	ci left: 2.608566e-04	ci right 3.083018e-04	k: 562	n:1980000
ZNF443   1980000 perm   1834 sec   (1080 perm/sec)   p_kst 2.838384e-04   p_cons 9.999909e-01   p_joint 1.584848e-03

Joint ci ratio: 6.973354e-02	ci left: 1.530131e-03	ci right 1.641177e-03	k: 3154	n:1990000
Cons ci ratio: 8.586404e-06	ci left: 9.999857e-01	ci right 9.999946e-01	k: 1989982	n:1990000
KS ci ratio: 1.650383e-01	ci left: 2.600275e-04	ci right 3.072758e-04	k: 563	n:1990000
ZNF443   1990000 perm   1850 sec   (1075 perm/sec)   p_kst 2.829146e-04   p_cons 9.999910e-01   p_joint 1.584925e-03

Joint ci ratio: 6.950253e-02	ci left: 1.532797e-03	ci right 1.643654e-03	k: 3175	n:2000000
Cons ci ratio: 8.543472e-06	ci left: 9.999858e-01	ci right 9.999947e-01	k: 1999982	n:2000000
KS ci ratio: 1.644561e-01	ci left: 2.606449e-04	ci right 3.078218e-04	k: 567	n:2000000
ZNF443   2000000 perm   1867 sec   (1071 perm/sec)   p_kst 2.835000e-04   p_cons 9.999910e-01   p_joint 1.587500e-03

Joint ci ratio: 6.933900e-02	ci left: 1.532505e-03	ci right 1.643069e-03	k: 3190	n:2010000
Cons ci ratio: 8.500967e-06	ci left: 9.999858e-01	ci right 9.999947e-01	k: 2009982	n:2010000
KS ci ratio: 1.643116e-01	ci left: 2.598252e-04	ci right 3.068084e-04	k: 568	n:2010000
ZNF443   2010000 perm   1882 sec   (1068 perm/sec)   p_kst 2.825871e-04   p_cons 9.999910e-01   p_joint 1.587065e-03

Joint ci ratio: 6.942649e-02	ci left: 1.521026e-03	ci right 1.630906e-03	k: 3182	n:2020000
Cons ci ratio: 8.458883e-06	ci left: 9.999859e-01	ci right 9.999947e-01	k: 2019982	n:2020000
KS ci ratio: 1.634520e-01	ci left: 2.613875e-04	ci right 3.083815e-04	k: 574	n:2020000
ZNF443   2020000 perm   1899 sec   (1064 perm/sec)   p_kst 2.841584e-04   p_cons 9.999911e-01   p_joint 1.575248e-03

Joint ci ratio: 6.930692e-02	ci left: 1.518858e-03	ci right 1.628385e-03	k: 3193	n:2030000
Cons ci ratio: 8.417213e-06	ci left: 9.999860e-01	ci right 9.999947e-01	k: 2029982	n:2030000
KS ci ratio: 1.630273e-01	ci left: 2.615173e-04	ci right 3.084005e-04	k: 577	n:2030000
ZNF443   2030000 perm   1915 sec   (1060 perm/sec)   p_kst 2.842365e-04   p_cons 9.999911e-01   p_joint 1.572906e-03

Joint ci ratio: 6.950361e-02	ci left: 1.502742e-03	ci right 1.611426e-03	k: 3175	n:2040000
Cons ci ratio: 8.375952e-06	ci left: 9.999861e-01	ci right 9.999948e-01	k: 2039982	n:2040000
KS ci ratio: 1.626058e-01	ci left: 2.616460e-04	ci right 3.084192e-04	k: 580	n:2040000
ZNF443   2040000 perm   1931 sec   (1056 perm/sec)   p_kst 2.843137e-04   p_cons 9.999912e-01   p_joint 1.556373e-03

Joint ci ratio: 6.938364e-02	ci left: 1.500684e-03	ci right 1.609025e-03	k: 3186	n:2050000
Cons ci ratio: 8.335094e-06	ci left: 9.999861e-01	ci right 9.999948e-01	k: 2049982	n:2050000
KS ci ratio: 1.619105e-01	ci left: 2.627097e-04	ci right 3.094527e-04	k: 585	n:2050000
ZNF443   2050000 perm   1948 sec   (1053 perm/sec)   p_kst 2.853659e-04   p_cons 9.999912e-01   p_joint 1.554146e-03

Joint ci ratio: 6.915608e-02	ci left: 1.503417e-03	ci right 1.611584e-03	k: 3207	n:2060000
Cons ci ratio: 8.294632e-06	ci left: 9.999862e-01	ci right 9.999948e-01	k: 2059982	n:2060000
KS ci ratio: 1.613607e-01	ci left: 2.632976e-04	ci right 3.099707e-04	k: 589	n:2060000
ZNF443   2060000 perm   1964 sec   (1049 perm/sec)   p_kst 2.859223e-04   p_cons 9.999913e-01   p_joint 1.556796e-03

Joint ci ratio: 6.594035e-02	ci left: 1.648138e-03	ci right 1.760993e-03	k: 3527	n:2070000
Cons ci ratio: 8.254561e-06	ci left: 9.999863e-01	ci right 9.999948e-01	k: 2069982	n:2070000
KS ci ratio: 1.609520e-01	ci left: 2.634165e-04	ci right 3.099809e-04	k: 592	n:2070000
ZNF443   2070000 perm   1981 sec   (1045 perm/sec)   p_kst 2.859903e-04   p_cons 9.999913e-01   p_joint 1.703865e-03

Joint ci ratio: 6.579135e-02	ci left: 1.647780e-03	ci right 1.760346e-03	k: 3543	n:2080000
Cons ci ratio: 8.214876e-06	ci left: 9.999863e-01	ci right 9.999949e-01	k: 2079982	n:2080000
KS ci ratio: 1.608165e-01	ci left: 2.626115e-04	ci right 3.089908e-04	k: 593	n:2080000
ZNF443   2080000 perm   1998 sec   (1041 perm/sec)   p_kst 2.850962e-04   p_cons 9.999913e-01   p_joint 1.703365e-03

Joint ci ratio: 6.567108e-02	ci left: 1.646013e-03	ci right 1.758246e-03	k: 3556	n:2090000
Cons ci ratio: 8.175570e-06	ci left: 9.999864e-01	ci right 9.999949e-01	k: 2089982	n:2090000
KS ci ratio: 1.601439e-01	ci left: 2.636512e-04	ci right 3.100007e-04	k: 598	n:2090000
ZNF443   2090000 perm   2014 sec   (1038 perm/sec)   p_kst 2.861244e-04   p_cons 9.999914e-01   p_joint 1.701435e-03

Joint ci ratio: 6.546885e-02	ci left: 1.648480e-03	ci right 1.760521e-03	k: 3578	n:2100000
Cons ci ratio: 8.136638e-06	ci left: 9.999865e-01	ci right 9.999949e-01	k: 2099982	n:2100000
KS ci ratio: 1.597443e-01	ci left: 2.637672e-04	ci right 3.100102e-04	k: 601	n:2100000
ZNF443   2100000 perm   2031 sec   (1034 perm/sec)   p_kst 2.861905e-04   p_cons 9.999914e-01   p_joint 1.703810e-03

Joint ci ratio: 6.548745e-02	ci left: 1.639734e-03	ci right 1.751214e-03	k: 3576	n:2110000
Cons ci ratio: 8.098076e-06	ci left: 9.999865e-01	ci right 9.999949e-01	k: 2109982	n:2110000
KS ci ratio: 1.588235e-01	ci left: 2.657024e-04	ci right 3.119906e-04	k: 608	n:2110000
ZNF443   2110000 perm   2048 sec   (1031 perm/sec)   p_kst 2.881517e-04   p_cons 9.999915e-01   p_joint 1.694787e-03

Joint ci ratio: 6.533238e-02	ci left: 1.639887e-03	ci right 1.751104e-03	k: 3593	n:2120000
Cons ci ratio: 8.059877e-06	ci left: 9.999866e-01	ci right 9.999950e-01	k: 2119982	n:2120000
KS ci ratio: 1.581754e-01	ci left: 2.667140e-04	ci right 3.129708e-04	k: 613	n:2120000
ZNF443   2120000 perm   2065 sec   (1027 perm/sec)   p_kst 2.891509e-04   p_cons 9.999915e-01   p_joint 1.694811e-03

Joint ci ratio: 6.546048e-02	ci left: 1.625723e-03	ci right 1.736203e-03	k: 3579	n:2130000
Cons ci ratio: 8.022038e-06	ci left: 9.999866e-01	ci right 9.999950e-01	k: 2129982	n:2130000
KS ci ratio: 1.576626e-01	ci left: 2.672656e-04	ci right 3.134536e-04	k: 617	n:2130000
ZNF443   2130000 perm   2082 sec   (1023 perm/sec)   p_kst 2.896714e-04   p_cons 9.999915e-01   p_joint 1.680282e-03

Joint ci ratio: 6.532380e-02	ci left: 1.625021e-03	ci right 1.735213e-03	k: 3594	n:2140000
Cons ci ratio: 7.984551e-06	ci left: 9.999867e-01	ci right 9.999950e-01	k: 2139982	n:2140000
KS ci ratio: 1.576627e-01	ci left: 2.660167e-04	ci right 3.119889e-04	k: 617	n:2140000
ZNF443   2140000 perm   2099 sec   (1020 perm/sec)   p_kst 2.883178e-04   p_cons 9.999916e-01   p_joint 1.679439e-03

Joint ci ratio: 6.536049e-02	ci left: 1.615632e-03	ci right 1.725252e-03	k: 3590	n:2150000
Cons ci ratio: 7.947414e-06	ci left: 9.999868e-01	ci right 9.999950e-01	k: 2149982	n:2150000
KS ci ratio: 1.574083e-01	ci left: 2.656729e-04	ci right 3.115046e-04	k: 619	n:2150000
ZNF443   2150000 perm   2116 sec   (1016 perm/sec)   p_kst 2.879070e-04   p_cons 9.999916e-01   p_joint 1.669767e-03

Joint ci ratio: 6.555301e-02	ci left: 1.598589e-03	ci right 1.707384e-03	k: 3569	n:2160000
Cons ci ratio: 7.910620e-06	ci left: 9.999868e-01	ci right 9.999951e-01	k: 2159982	n:2160000
KS ci ratio: 1.571550e-01	ci left: 2.653325e-04	ci right 3.110248e-04	k: 621	n:2160000
ZNF443   2160000 perm   2133 sec   (1013 perm/sec)   p_kst 2.875000e-04   p_cons 9.999917e-01   p_joint 1.652315e-03

Joint ci ratio: 6.556246e-02	ci left: 1.590768e-03	ci right 1.699048e-03	k: 3568	n:2170000
Cons ci ratio: 8.078725e-06	ci left: 9.999863e-01	ci right 9.999947e-01	k: 2169981	n:2170000
KS ci ratio: 1.570289e-01	ci left: 2.645524e-04	ci right 3.100705e-04	k: 622	n:2170000
ZNF443   2170000 perm   2150 sec   (1009 perm/sec)   p_kst 2.866359e-04   p_cons 9.999912e-01   p_joint 1.644240e-03

Joint ci ratio: 6.560876e-02	ci left: 1.581215e-03	ci right 1.688923e-03	k: 3563	n:2180000
Cons ci ratio: 8.041667e-06	ci left: 9.999864e-01	ci right 9.999948e-01	k: 2179981	n:2180000
KS ci ratio: 1.569031e-01	ci left: 2.637796e-04	ci right 3.091249e-04	k: 623	n:2180000
ZNF443   2180000 perm   2168 sec   (1006 perm/sec)   p_kst 2.857798e-04   p_cons 9.999913e-01   p_joint 1.634404e-03

Joint ci ratio: 6.581277e-02	ci left: 1.564114e-03	ci right 1.671001e-03	k: 3541	n:2190000
Cons ci ratio: 8.004947e-06	ci left: 9.999865e-01	ci right 9.999948e-01	k: 2189981	n:2190000
KS ci ratio: 1.566523e-01	ci left: 2.634525e-04	ci right 3.086624e-04	k: 625	n:2190000
ZNF443   2190000 perm   2185 sec   (1002 perm/sec)   p_kst 2.853881e-04   p_cons 9.999913e-01   p_joint 1.616895e-03

Joint ci ratio: 6.588759e-02	ci left: 1.553428e-03	ci right 1.659709e-03	k: 3533	n:2200000
Cons ci ratio: 7.968560e-06	ci left: 9.999865e-01	ci right 9.999948e-01	k: 2199981	n:2200000
KS ci ratio: 1.564027e-01	ci left: 2.631285e-04	ci right 3.082040e-04	k: 627	n:2200000
ZNF443   2200000 perm   2203 sec   (999 perm/sec)   p_kst 2.850000e-04   p_cons 9.999914e-01   p_joint 1.605909e-03

Joint ci ratio: 6.616027e-02	ci left: 1.533492e-03	ci right 1.638861e-03	k: 3504	n:2210000
Cons ci ratio: 7.932503e-06	ci left: 9.999866e-01	ci right 9.999948e-01	k: 2209981	n:2210000
KS ci ratio: 1.560304e-01	ci left: 2.632423e-04	ci right 3.082199e-04	k: 630	n:2210000
ZNF443   2210000 perm   2221 sec   (995 perm/sec)   p_kst 2.850679e-04   p_cons 9.999914e-01   p_joint 1.585520e-03

Joint ci ratio: 6.616051e-02	ci left: 1.526585e-03	ci right 1.631479e-03	k: 3504	n:2220000
Cons ci ratio: 8.091784e-06	ci left: 9.999861e-01	ci right 9.999945e-01	k: 2219980	n:2220000
KS ci ratio: 1.559070e-01	ci left: 2.624894e-04	ci right 3.072996e-04	k: 631	n:2220000
ZNF443   2220000 perm   2238 sec   (992 perm/sec)   p_kst 2.842342e-04   p_cons 9.999910e-01   p_joint 1.578378e-03

Joint ci ratio: 6.610410e-02	ci left: 1.522385e-03	ci right 1.626898e-03	k: 3510	n:2230000
Cons ci ratio: 8.055498e-06	ci left: 9.999861e-01	ci right 9.999945e-01	k: 2229980	n:2230000
KS ci ratio: 1.555383e-01	ci left: 2.626051e-04	ci right 3.073192e-04	k: 634	n:2230000
ZNF443   2230000 perm   2256 sec   (988 perm/sec)   p_kst 2.843049e-04   p_cons 9.999910e-01   p_joint 1.573991e-03

Joint ci ratio: 6.617989e-02	ci left: 1.512076e-03	ci right 1.616005e-03	k: 3502	n:2240000
Cons ci ratio: 8.019536e-06	ci left: 9.999862e-01	ci right 9.999945e-01	k: 2239980	n:2240000
KS ci ratio: 1.548085e-01	ci left: 2.640074e-04	ci right 3.087297e-04	k: 640	n:2240000
ZNF443   2240000 perm   2274 sec   (985 perm/sec)   p_kst 2.857143e-04   p_cons 9.999911e-01   p_joint 1.563393e-03

Joint ci ratio: 6.296698e-02	ci left: 1.665401e-03	ci right 1.774110e-03	k: 3868	n:2250000
Cons ci ratio: 7.983894e-06	ci left: 9.999863e-01	ci right 9.999946e-01	k: 2249980	n:2250000
KS ci ratio: 1.544475e-01	ci left: 2.641158e-04	ci right 3.087425e-04	k: 643	n:2250000
ZNF443   2250000 perm   2292 sec   (982 perm/sec)   p_kst 2.857778e-04   p_cons 9.999911e-01   p_joint 1.719111e-03

Joint ci ratio: 6.298353e-02	ci left: 1.657161e-03	ci right 1.765361e-03	k: 3866	n:2260000
Cons ci ratio: 7.948567e-06	ci left: 9.999863e-01	ci right 9.999946e-01	k: 2259980	n:2260000
KS ci ratio: 1.542083e-01	ci left: 2.637979e-04	ci right 3.082955e-04	k: 645	n:2260000
ZNF443   2260000 perm   2310 sec   (978 perm/sec)   p_kst 2.853982e-04   p_cons 9.999912e-01   p_joint 1.710619e-03

Joint ci ratio: 6.298377e-02	ci left: 1.649861e-03	ci right 1.757584e-03	k: 3866	n:2270000
Cons ci ratio: 7.913551e-06	ci left: 9.999864e-01	ci right 9.999946e-01	k: 2269980	n:2270000
KS ci ratio: 1.539701e-01	ci left: 2.634829e-04	ci right 3.078524e-04	k: 647	n:2270000
ZNF443   2270000 perm   2328 sec   (975 perm/sec)   p_kst 2.850220e-04   p_cons 9.999912e-01   p_joint 1.703084e-03

Joint ci ratio: 6.294326e-02	ci left: 1.644783e-03	ci right 1.752103e-03	k: 3871	n:2280000
Cons ci ratio: 7.878842e-06	ci left: 9.999865e-01	ci right 9.999946e-01	k: 2279980	n:2280000
KS ci ratio: 1.533795e-01	ci left: 2.644359e-04	ci right 3.087794e-04	k: 652	n:2280000
ZNF443   2280000 perm   2350 sec   (970 perm/sec)   p_kst 2.859649e-04   p_cons 9.999912e-01   p_joint 1.697807e-03

Joint ci ratio: 5.841749e-02	ci left: 1.905108e-03	ci right 2.020175e-03	k: 4493	n:2290000
Cons ci ratio: 7.844436e-06	ci left: 9.999865e-01	ci right 9.999947e-01	k: 2289980	n:2290000
KS ci ratio: 1.530283e-01	ci left: 2.645410e-04	ci right 3.087912e-04	k: 655	n:2290000
ZNF443   2290000 perm   2370 sec   (966 perm/sec)   p_kst 2.860262e-04   p_cons 9.999913e-01   p_joint 1.962009e-03

Joint ci ratio: 5.822979e-02	ci left: 1.909250e-03	ci right 2.024184e-03	k: 4522	n:2300000
Cons ci ratio: 7.810330e-06	ci left: 9.999866e-01	ci right 9.999947e-01	k: 2299980	n:2300000
KS ci ratio: 1.524484e-01	ci left: 2.654816e-04	ci right 3.097056e-04	k: 660	n:2300000
ZNF443   2300000 perm   2388 sec   (963 perm/sec)   p_kst 2.869565e-04   p_cons 9.999913e-01   p_joint 1.966087e-03

Joint ci ratio: 5.808226e-02	ci left: 1.910797e-03	ci right 2.025523e-03	k: 4545	n:2310000
Cons ci ratio: 7.776519e-06	ci left: 9.999866e-01	ci right 9.999947e-01	k: 2309980	n:2310000
KS ci ratio: 1.519892e-01	ci left: 2.659980e-04	ci right 3.101623e-04	k: 664	n:2310000
ZNF443   2310000 perm   2406 sec   (960 perm/sec)   p_kst 2.874459e-04   p_cons 9.999913e-01   p_joint 1.967532e-03

Joint ci ratio: 5.796763e-02	ci left: 1.910206e-03	ci right 2.024663e-03	k: 4563	n:2320000
Cons ci ratio: 7.742999e-06	ci left: 9.999867e-01	ci right 9.999947e-01	k: 2319980	n:2320000
KS ci ratio: 1.518751e-01	ci left: 2.652661e-04	ci right 3.092728e-04	k: 665	n:2320000
ZNF443   2320000 perm   2425 sec   (957 perm/sec)   p_kst 2.866379e-04   p_cons 9.999914e-01   p_joint 1.966810e-03

Joint ci ratio: 5.785368e-02	ci left: 1.909622e-03	ci right 2.023811e-03	k: 4581	n:2330000
Cons ci ratio: 7.709768e-06	ci left: 9.999867e-01	ci right 9.999948e-01	k: 2329980	n:2330000
KS ci ratio: 1.516476e-01	ci left: 2.649534e-04	ci right 3.088364e-04	k: 667	n:2330000
ZNF443   2330000 perm   2446 sec   (953 perm/sec)   p_kst 2.862661e-04   p_cons 9.999914e-01   p_joint 1.966094e-03

Joint ci ratio: 5.773411e-02	ci left: 1.909463e-03	ci right 2.023399e-03	k: 4600	n:2340000
Cons ci ratio: 7.676820e-06	ci left: 9.999868e-01	ci right 9.999948e-01	k: 2339980	n:2340000
KS ci ratio: 1.511955e-01	ci left: 2.654658e-04	ci right 3.092907e-04	k: 671	n:2340000
ZNF443   2340000 perm   2470 sec   (947 perm/sec)   p_kst 2.867521e-04   p_cons 9.999915e-01   p_joint 1.965812e-03

Joint ci ratio: 5.765906e-02	ci left: 1.906370e-03	ci right 2.019969e-03	k: 4612	n:2350000
Cons ci ratio: 7.644152e-06	ci left: 9.999869e-01	ci right 9.999948e-01	k: 2349980	n:2350000
KS ci ratio: 1.509711e-01	ci left: 2.651550e-04	ci right 3.088578e-04	k: 673	n:2350000
ZNF443   2350000 perm   2491 sec   (943 perm/sec)   p_kst 2.863830e-04   p_cons 9.999915e-01   p_joint 1.962553e-03

Joint ci ratio: 5.798770e-02	ci left: 1.876576e-03	ci right 1.989058e-03	k: 4560	n:2360000
Cons ci ratio: 7.611762e-06	ci left: 9.999869e-01	ci right 9.999948e-01	k: 2359980	n:2360000
KS ci ratio: 1.504141e-01	ci left: 2.660703e-04	ci right 3.097476e-04	k: 678	n:2360000
ZNF443   2360000 perm   2510 sec   (940 perm/sec)   p_kst 2.872881e-04   p_cons 9.999915e-01   p_joint 1.932203e-03

Joint ci ratio: 5.789897e-02	ci left: 1.874480e-03	ci right 1.986658e-03	k: 4574	n:2370000
Cons ci ratio: 7.579644e-06	ci left: 9.999870e-01	ci right 9.999948e-01	k: 2369980	n:2370000
KS ci ratio: 1.503035e-01	ci left: 2.653537e-04	ci right 3.088784e-04	k: 679	n:2370000
ZNF443   2370000 perm   2529 sec   (937 perm/sec)   p_kst 2.864979e-04   p_cons 9.999916e-01   p_joint 1.929958e-03

Joint ci ratio: 5.898116e-02	ci left: 1.797873e-03	ci right 1.907547e-03	k: 4408	n:2380000
Cons ci ratio: 7.547797e-06	ci left: 9.999870e-01	ci right 9.999949e-01	k: 2379980	n:2380000
KS ci ratio: 1.497539e-01	ci left: 2.662607e-04	ci right 3.097603e-04	k: 684	n:2380000
ZNF443   2380000 perm   2548 sec   (934 perm/sec)   p_kst 2.873950e-04   p_cons 9.999916e-01   p_joint 1.852101e-03

Joint ci ratio: 5.980230e-02	ci left: 1.740885e-03	ci right 1.848612e-03	k: 4288	n:2390000
Cons ci ratio: 7.516216e-06	ci left: 9.999871e-01	ci right 9.999949e-01	k: 2389980	n:2390000
KS ci ratio: 1.491022e-01	ci left: 2.675633e-04	ci right 3.110684e-04	k: 690	n:2390000
ZNF443   2390000 perm   2568 sec   (931 perm/sec)   p_kst 2.887029e-04   p_cons 9.999916e-01   p_joint 1.794142e-03

Joint ci ratio: 5.970499e-02	ci left: 1.739378e-03	ci right 1.846830e-03	k: 4302	n:2400000
Cons ci ratio: 7.484899e-06	ci left: 9.999871e-01	ci right 9.999949e-01	k: 2399980	n:2400000
KS ci ratio: 1.489945e-01	ci left: 2.668495e-04	ci right 3.102045e-04	k: 691	n:2400000
ZNF443   2400000 perm   2587 sec   (928 perm/sec)   p_kst 2.879167e-04   p_cons 9.999917e-01   p_joint 1.792500e-03

Joint ci ratio: 5.960815e-02	ci left: 1.737883e-03	ci right 1.845063e-03	k: 4316	n:2410000
Cons ci ratio: 7.453841e-06	ci left: 9.999872e-01	ci right 9.999949e-01	k: 2409980	n:2410000
KS ci ratio: 1.488870e-01	ci left: 2.661417e-04	ci right 3.093478e-04	k: 692	n:2410000
ZNF443   2410000 perm   2609 sec   (924 perm/sec)   p_kst 2.871369e-04   p_cons 9.999917e-01   p_joint 1.790871e-03

Joint ci ratio: 5.974021e-02	ci left: 1.722967e-03	ci right 1.829471e-03	k: 4297	n:2420000
Cons ci ratio: 7.423040e-06	ci left: 9.999872e-01	ci right 9.999950e-01	k: 2419980	n:2420000
KS ci ratio: 1.485658e-01	ci left: 2.662355e-04	ci right 3.093552e-04	k: 695	n:2420000
ZNF443   2420000 perm   2628 sec   (921 perm/sec)   p_kst 2.871901e-04   p_cons 9.999917e-01   p_joint 1.775620e-03

Joint ci ratio: 5.963627e-02	ci left: 1.721957e-03	ci right 1.828207e-03	k: 4312	n:2430000
Cons ci ratio: 7.392492e-06	ci left: 9.999873e-01	ci right 9.999950e-01	k: 2429980	n:2430000
KS ci ratio: 1.482467e-01	ci left: 2.663286e-04	ci right 3.093625e-04	k: 698	n:2430000
ZNF443   2430000 perm   2647 sec   (918 perm/sec)   p_kst 2.872428e-04   p_cons 9.999918e-01   p_joint 1.774486e-03

Joint ci ratio: 5.962957e-02	ci left: 1.715304e-03	ci right 1.821130e-03	k: 4313	n:2440000
Cons ci ratio: 7.362195e-06	ci left: 9.999873e-01	ci right 9.999950e-01	k: 2439980	n:2440000
KS ci ratio: 1.479296e-01	ci left: 2.664211e-04	ci right 3.093697e-04	k: 701	n:2440000
ZNF443   2440000 perm   2667 sec   (915 perm/sec)   p_kst 2.872951e-04   p_cons 9.999918e-01   p_joint 1.767623e-03

Joint ci ratio: 5.945744e-02	ci left: 1.718355e-03	ci right 1.824053e-03	k: 4338	n:2450000
Cons ci ratio: 7.332145e-06	ci left: 9.999874e-01	ci right 9.999950e-01	k: 2449980	n:2450000
KS ci ratio: 1.478244e-01	ci left: 2.657267e-04	ci right 3.085302e-04	k: 702	n:2450000
ZNF443   2450000 perm   2686 sec   (912 perm/sec)   p_kst 2.865306e-04   p_cons 9.999918e-01   p_joint 1.770612e-03

Joint ci ratio: 5.949888e-02	ci left: 1.708966e-03	ci right 1.814163e-03	k: 4332	n:2460000
Cons ci ratio: 7.302339e-06	ci left: 9.999874e-01	ci right 9.999950e-01	k: 2459980	n:2460000
KS ci ratio: 1.471974e-01	ci left: 2.669955e-04	ci right 3.098050e-04	k: 708	n:2460000
ZNF443   2460000 perm   2705 sec   (909 perm/sec)   p_kst 2.878049e-04   p_cons 9.999919e-01   p_joint 1.760976e-03

Joint ci ratio: 5.982501e-02	ci left: 1.683302e-03	ci right 1.787507e-03	k: 4285	n:2470000
Cons ci ratio: 7.272775e-06	ci left: 9.999875e-01	ci right 9.999951e-01	k: 2469980	n:2470000
KS ci ratio: 1.471975e-01	ci left: 2.659146e-04	ci right 3.085507e-04	k: 708	n:2470000
ZNF443   2470000 perm   2724 sec   (907 perm/sec)   p_kst 2.866397e-04   p_cons 9.999919e-01   p_joint 1.734818e-03

Joint ci ratio: 6.011393e-02	ci left: 1.660230e-03	ci right 1.763520e-03	k: 4244	n:2480000
Cons ci ratio: 7.243449e-06	ci left: 9.999875e-01	ci right 9.999951e-01	k: 2479980	n:2480000
KS ci ratio: 1.468871e-01	ci left: 2.660075e-04	ci right 3.085607e-04	k: 711	n:2480000
ZNF443   2480000 perm   2744 sec   (904 perm/sec)   p_kst 2.866935e-04   p_cons 9.999919e-01   p_joint 1.711290e-03

Joint ci ratio: 6.002921e-02	ci left: 1.658309e-03	ci right 1.761329e-03	k: 4256	n:2490000
Cons ci ratio: 7.214359e-06	ci left: 9.999876e-01	ci right 9.999951e-01	k: 2489980	n:2490000
KS ci ratio: 1.467841e-01	ci left: 2.653260e-04	ci right 3.077379e-04	k: 712	n:2490000
ZNF443   2490000 perm   2763 sec   (901 perm/sec)   p_kst 2.859438e-04   p_cons 9.999920e-01   p_joint 1.709237e-03

Joint ci ratio: 5.991673e-02	ci left: 1.657980e-03	ci right 1.760780e-03	k: 4272	n:2500000
Cons ci ratio: 7.185502e-06	ci left: 9.999876e-01	ci right 9.999951e-01	k: 2499980	n:2500000
KS ci ratio: 1.466813e-01	ci left: 2.646500e-04	ci right 3.069216e-04	k: 713	n:2500000
ZNF443   2500000 perm   2783 sec   (898 perm/sec)   p_kst 2.852000e-04   p_cons 9.999920e-01   p_joint 1.708800e-03

Joint ci ratio: 5.990991e-02	ci left: 1.651767e-03	ci right 1.754169e-03	k: 4273	n:2510000
Cons ci ratio: 7.156874e-06	ci left: 9.999877e-01	ci right 9.999951e-01	k: 2509980	n:2510000
KS ci ratio: 1.462721e-01	ci left: 2.651309e-04	ci right 3.073508e-04	k: 717	n:2510000
ZNF443   2510000 perm   2810 sec   (893 perm/sec)   p_kst 2.856574e-04   p_cons 9.999920e-01   p_joint 1.702390e-03

Joint ci ratio: 6.070490e-02	ci left: 1.601827e-03	ci right 1.702498e-03	k: 4162	n:2520000
Cons ci ratio: 7.128474e-06	ci left: 9.999877e-01	ci right 9.999952e-01	k: 2519980	n:2520000
KS ci ratio: 1.461704e-01	ci left: 2.644611e-04	ci right 3.065425e-04	k: 718	n:2520000
ZNF443   2520000 perm   2829 sec   (891 perm/sec)   p_kst 2.849206e-04   p_cons 9.999921e-01   p_joint 1.651587e-03

Joint ci ratio: 6.061765e-02	ci left: 1.600167e-03	ci right 1.700584e-03	k: 4174	n:2530000
Cons ci ratio: 7.100298e-06	ci left: 9.999878e-01	ci right 9.999952e-01	k: 2529980	n:2530000
KS ci ratio: 1.459676e-01	ci left: 2.641774e-04	ci right 3.061503e-04	k: 720	n:2530000
ZNF443   2530000 perm   2850 sec   (888 perm/sec)   p_kst 2.845850e-04   p_cons 9.999921e-01   p_joint 1.649802e-03

Joint ci ratio: 5.640335e-02	ci left: 1.844488e-03	ci right 1.951928e-03	k: 4820	n:2540000
Cons ci ratio: 7.072344e-06	ci left: 9.999878e-01	ci right 9.999952e-01	k: 2539980	n:2540000
KS ci ratio: 1.456649e-01	ci left: 2.642753e-04	ci right 3.061691e-04	k: 723	n:2540000
ZNF443   2540000 perm   2870 sec   (885 perm/sec)   p_kst 2.846457e-04   p_cons 9.999921e-01   p_joint 1.897638e-03

Joint ci ratio: 5.628088e-02	ci left: 1.845374e-03	ci right 1.952625e-03	k: 4841	n:2550000
Cons ci ratio: 7.044609e-06	ci left: 9.999879e-01	ci right 9.999952e-01	k: 2549980	n:2550000
KS ci ratio: 1.454641e-01	ci left: 2.639947e-04	ci right 3.057813e-04	k: 725	n:2550000
ZNF443   2550000 perm   2895 sec   (881 perm/sec)   p_kst 2.843137e-04   p_cons 9.999922e-01   p_joint 1.898431e-03

Joint ci ratio: 5.669315e-02	ci left: 1.811207e-03	ci right 1.917268e-03	k: 4771	n:2560000
Cons ci ratio: 7.017091e-06	ci left: 9.999879e-01	ci right 9.999952e-01	k: 2559980	n:2560000
KS ci ratio: 1.451645e-01	ci left: 2.640927e-04	ci right 3.058013e-04	k: 728	n:2560000
ZNF443   2560000 perm   2914 sec   (878 perm/sec)   p_kst 2.843750e-04   p_cons 9.999922e-01   p_joint 1.863672e-03

Joint ci ratio: 5.662801e-02	ci left: 1.808379e-03	ci right 1.914149e-03	k: 4782	n:2570000
Cons ci ratio: 6.989787e-06	ci left: 9.999880e-01	ci right 9.999952e-01	k: 2569980	n:2570000
KS ci ratio: 1.449658e-01	ci left: 2.638151e-04	ci right 3.054179e-04	k: 730	n:2570000
ZNF443   2570000 perm   2934 sec   (876 perm/sec)   p_kst 2.840467e-04   p_cons 9.999922e-01   p_joint 1.860700e-03

Joint ci ratio: 5.690301e-02	ci left: 1.783793e-03	ci right 1.888648e-03	k: 4736	n:2580000
Cons ci ratio: 6.962695e-06	ci left: 9.999880e-01	ci right 9.999953e-01	k: 2579980	n:2580000
KS ci ratio: 1.447679e-01	ci left: 2.635397e-04	ci right 3.050373e-04	k: 732	n:2580000
ZNF443   2580000 perm   2954 sec   (873 perm/sec)   p_kst 2.837209e-04   p_cons 9.999922e-01   p_joint 1.835659e-03

Joint ci ratio: 5.677129e-02	ci left: 1.785279e-03	ci right 1.889971e-03	k: 4758	n:2590000
Cons ci ratio: 6.935812e-06	ci left: 9.999881e-01	ci right 9.999953e-01	k: 2589980	n:2590000
KS ci ratio: 1.445708e-01	ci left: 2.632664e-04	ci right 3.046597e-04	k: 734	n:2590000
ZNF443   2590000 perm   2975 sec   (871 perm/sec)   p_kst 2.833977e-04   p_cons 9.999923e-01   p_joint 1.837066e-03

Joint ci ratio: 5.669992e-02	ci left: 1.782963e-03	ci right 1.887382e-03	k: 4770	n:2600000
Cons ci ratio: 7.071727e-06	ci left: 9.999877e-01	ci right 9.999950e-01	k: 2599979	n:2600000
KS ci ratio: 1.444726e-01	ci left: 2.626245e-04	ci right 3.038865e-04	k: 735	n:2600000
ZNF443   2600000 perm   2995 sec   (868 perm/sec)   p_kst 2.826923e-04   p_cons 9.999919e-01   p_joint 1.834615e-03

Joint ci ratio: 5.530651e-02	ci left: 1.867934e-03	ci right 1.974556e-03	k: 5013	n:2610000
Cons ci ratio: 7.044632e-06	ci left: 9.999877e-01	ci right 9.999950e-01	k: 2609979	n:2610000
KS ci ratio: 1.442768e-01	ci left: 2.623569e-04	ci right 3.035161e-04	k: 737	n:2610000
ZNF443   2610000 perm   3016 sec   (865 perm/sec)   p_kst 2.823755e-04   p_cons 9.999920e-01   p_joint 1.920690e-03

Joint ci ratio: 5.517457e-02	ci left: 1.869838e-03	ci right 1.976306e-03	k: 5037	n:2620000
Cons ci ratio: 7.017744e-06	ci left: 9.999877e-01	ci right 9.999950e-01	k: 2619979	n:2620000
KS ci ratio: 1.435009e-01	ci left: 2.642991e-04	ci right 3.055209e-04	k: 745	n:2620000
ZNF443   2620000 perm   3037 sec   (863 perm/sec)   p_kst 2.843511e-04   p_cons 9.999920e-01   p_joint 1.922519e-03

Joint ci ratio: 5.508174e-02	ci left: 1.869103e-03	ci right 1.975344e-03	k: 5054	n:2630000
Cons ci ratio: 6.991061e-06	ci left: 9.999878e-01	ci right 9.999951e-01	k: 2629979	n:2630000
KS ci ratio: 1.432133e-01	ci left: 2.643939e-04	ci right 3.055408e-04	k: 748	n:2630000
ZNF443   2630000 perm   3057 sec   (860 perm/sec)   p_kst 2.844106e-04   p_cons 9.999920e-01   p_joint 1.921673e-03

Joint ci ratio: 5.497309e-02	ci left: 1.869495e-03	ci right 1.975542e-03	k: 5074	n:2640000
Cons ci ratio: 6.964579e-06	ci left: 9.999878e-01	ci right 9.999951e-01	k: 2639979	n:2640000
KS ci ratio: 1.429273e-01	ci left: 2.644881e-04	ci right 3.055605e-04	k: 751	n:2640000
ZNF443   2640000 perm   3078 sec   (858 perm/sec)   p_kst 2.844697e-04   p_cons 9.999920e-01   p_joint 1.921970e-03

Joint ci ratio: 5.485429e-02	ci left: 1.870628e-03	ci right 1.976503e-03	k: 5096	n:2650000
Cons ci ratio: 6.938298e-06	ci left: 9.999879e-01	ci right 9.999951e-01	k: 2649979	n:2650000
KS ci ratio: 1.424544e-01	ci left: 2.653095e-04	ci right 3.063615e-04	k: 756	n:2650000
ZNF443   2650000 perm   3099 sec   (855 perm/sec)   p_kst 2.852830e-04   p_cons 9.999921e-01   p_joint 1.923019e-03

Joint ci ratio: 5.476843e-02	ci left: 1.869528e-03	ci right 1.975170e-03	k: 5112	n:2660000
Cons ci ratio: 7.067565e-06	ci left: 9.999875e-01	ci right 9.999948e-01	k: 2659978	n:2660000
KS ci ratio: 1.422667e-01	ci left: 2.650372e-04	ci right 3.059884e-04	k: 758	n:2660000
ZNF443   2660000 perm   3119 sec   (853 perm/sec)   p_kst 2.849624e-04   p_cons 9.999917e-01   p_joint 1.921805e-03

Joint ci ratio: 5.467229e-02	ci left: 1.869175e-03	ci right 1.974606e-03	k: 5130	n:2670000
Cons ci ratio: 7.041095e-06	ci left: 9.999875e-01	ci right 9.999948e-01	k: 2669978	n:2670000
KS ci ratio: 1.418932e-01	ci left: 2.654894e-04	ci right 3.063937e-04	k: 762	n:2670000
ZNF443   2670000 perm   3140 sec   (850 perm/sec)   p_kst 2.853933e-04   p_cons 9.999918e-01   p_joint 1.921348e-03

Joint ci ratio: 5.458197e-02	ci left: 1.868458e-03	ci right 1.973668e-03	k: 5147	n:2680000
Cons ci ratio: 7.014822e-06	ci left: 9.999876e-01	ci right 9.999949e-01	k: 2679978	n:2680000
KS ci ratio: 1.418004e-01	ci left: 2.648587e-04	ci right 3.056368e-04	k: 763	n:2680000
ZNF443   2680000 perm   3161 sec   (848 perm/sec)   p_kst 2.847015e-04   p_cons 9.999918e-01   p_joint 1.920522e-03

Joint ci ratio: 5.444459e-02	ci left: 1.871045e-03	ci right 1.976128e-03	k: 5173	n:2690000
Cons ci ratio: 6.988744e-06	ci left: 9.999876e-01	ci right 9.999949e-01	k: 2689978	n:2690000
KS ci ratio: 1.415228e-01	ci left: 2.649498e-04	ci right 3.056554e-04	k: 766	n:2690000
ZNF443   2690000 perm   3183 sec   (845 perm/sec)   p_kst 2.847584e-04   p_cons 9.999918e-01   p_joint 1.923048e-03

Joint ci ratio: 5.213793e-02	ci left: 2.034779e-03	ci right 2.144071e-03	k: 5640	n:2700000
Cons ci ratio: 6.962860e-06	ci left: 9.999877e-01	ci right 9.999949e-01	k: 2699978	n:2700000
KS ci ratio: 1.411552e-01	ci left: 2.653976e-04	ci right 3.060572e-04	k: 770	n:2700000
ZNF443   2700000 perm   3204 sec   (843 perm/sec)   p_kst 2.851852e-04   p_cons 9.999919e-01   p_joint 2.088889e-03

Joint ci ratio: 5.205497e-02	ci left: 2.033826e-03	ci right 2.142888e-03	k: 5658	n:2710000
Cons ci ratio: 6.937167e-06	ci left: 9.999877e-01	ci right 9.999949e-01	k: 2709978	n:2710000
KS ci ratio: 1.409725e-01	ci left: 2.651302e-04	ci right 3.056918e-04	k: 772	n:2710000
ZNF443   2710000 perm   3225 sec   (840 perm/sec)   p_kst 2.848708e-04   p_cons 9.999919e-01   p_joint 2.087823e-03

Joint ci ratio: 5.192660e-02	ci left: 2.036509e-03	ci right 2.145437e-03	k: 5686	n:2720000
Cons ci ratio: 6.911662e-06	ci left: 9.999878e-01	ci right 9.999949e-01	k: 2719978	n:2720000
KS ci ratio: 1.406997e-01	ci left: 2.652195e-04	ci right 3.057098e-04	k: 775	n:2720000
ZNF443   2720000 perm   3247 sec   (838 perm/sec)   p_kst 2.849265e-04   p_cons 9.999919e-01   p_joint 2.090441e-03

Joint ci ratio: 5.200015e-02	ci left: 2.023265e-03	ci right 2.131642e-03	k: 5670	n:2730000
Cons ci ratio: 6.886345e-06	ci left: 9.999878e-01	ci right 9.999949e-01	k: 2729978	n:2730000
KS ci ratio: 1.403384e-01	ci left: 2.656617e-04	ci right 3.061066e-04	k: 779	n:2730000
ZNF443   2730000 perm   3268 sec   (835 perm/sec)   p_kst 2.853480e-04   p_cons 9.999919e-01   p_joint 2.076923e-03

Joint ci ratio: 5.206479e-02	ci left: 2.010837e-03	ci right 2.118687e-03	k: 5656	n:2740000
Cons ci ratio: 6.861212e-06	ci left: 9.999878e-01	ci right 9.999950e-01	k: 2739978	n:2740000
KS ci ratio: 1.401589e-01	ci left: 2.653965e-04	ci right 3.057450e-04	k: 781	n:2740000
ZNF443   2740000 perm   3290 sec   (833 perm/sec)   p_kst 2.850365e-04   p_cons 9.999920e-01   p_joint 2.064234e-03

Joint ci ratio: 5.214819e-02	ci left: 1.997065e-03	ci right 2.104352e-03	k: 5638	n:2750000
Cons ci ratio: 6.983297e-06	ci left: 9.999875e-01	ci right 9.999947e-01	k: 2749977	n:2750000
KS ci ratio: 1.399800e-01	ci left: 2.651332e-04	ci right 3.053859e-04	k: 783	n:2750000
ZNF443   2750000 perm   3312 sec   (830 perm/sec)   p_kst 2.847273e-04   p_cons 9.999916e-01   p_joint 2.050182e-03

Joint ci ratio: 5.228794e-02	ci left: 1.979101e-03	ci right 2.085717e-03	k: 5608	n:2760000
Cons ci ratio: 6.957995e-06	ci left: 9.999875e-01	ci right 9.999947e-01	k: 2759977	n:2760000
KS ci ratio: 1.397130e-01	ci left: 2.652215e-04	ci right 3.054044e-04	k: 786	n:2760000
ZNF443   2760000 perm   3334 sec   (828 perm/sec)   p_kst 2.847826e-04   p_cons 9.999917e-01   p_joint 2.031884e-03

Joint ci ratio: 5.222287e-02	ci left: 1.976944e-03	ci right 2.083307e-03	k: 5622	n:2770000
Cons ci ratio: 6.932876e-06	ci left: 9.999875e-01	ci right 9.999947e-01	k: 2769977	n:2770000
KS ci ratio: 1.396243e-01	ci left: 2.646124e-04	ci right 3.046755e-04	k: 787	n:2770000
ZNF443   2770000 perm   3356 sec   (825 perm/sec)   p_kst 2.841155e-04   p_cons 9.999917e-01   p_joint 2.029603e-03

Joint ci ratio: 5.215803e-02	ci left: 1.974803e-03	ci right 2.080915e-03	k: 5636	n:2780000
Cons ci ratio: 7.050385e-06	ci left: 9.999872e-01	ci right 9.999945e-01	k: 2779976	n:2780000
KS ci ratio: 1.393593e-01	ci left: 2.647020e-04	ci right 3.046963e-04	k: 790	n:2780000
ZNF443   2780000 perm   3378 sec   (823 perm/sec)   p_kst 2.841727e-04   p_cons 9.999914e-01   p_joint 2.027338e-03

Joint ci ratio: 5.208883e-02	ci left: 1.973031e-03	ci right 2.078903e-03	k: 5651	n:2790000
Cons ci ratio: 7.025115e-06	ci left: 9.999872e-01	ci right 9.999945e-01	k: 2789976	n:2790000
KS ci ratio: 1.385730e-01	ci left: 2.668669e-04	ci right 3.069421e-04	k: 799	n:2790000
ZNF443   2790000 perm   3400 sec   (821 perm/sec)   p_kst 2.863799e-04   p_cons 9.999914e-01   p_joint 2.025448e-03

Joint ci ratio: 5.317962e-02	ci left: 1.885273e-03	ci right 1.988619e-03	k: 5422	n:2800000
Cons ci ratio: 7.000025e-06	ci left: 9.999872e-01	ci right 9.999945e-01	k: 2799976	n:2800000
KS ci ratio: 1.381420e-01	ci left: 2.676378e-04	ci right 3.076933e-04	k: 804	n:2800000
ZNF443   2800000 perm   3422 sec   (818 perm/sec)   p_kst 2.871429e-04   p_cons 9.999914e-01   p_joint 1.936429e-03

Joint ci ratio: 5.320438e-02	ci left: 1.876808e-03	ci right 1.979739e-03	k: 5417	n:2810000
Cons ci ratio: 6.975114e-06	ci left: 9.999873e-01	ci right 9.999945e-01	k: 2809976	n:2810000
KS ci ratio: 1.379707e-01	ci left: 2.673725e-04	ci right 3.073346e-04	k: 806	n:2810000
ZNF443   2810000 perm   3444 sec   (816 perm/sec)   p_kst 2.868327e-04   p_cons 9.999915e-01   p_joint 1.927758e-03

Joint ci ratio: 5.310156e-02	ci left: 1.877500e-03	ci right 1.980265e-03	k: 5438	n:2820000
Cons ci ratio: 6.950379e-06	ci left: 9.999873e-01	ci right 9.999945e-01	k: 2819976	n:2820000
KS ci ratio: 1.377150e-01	ci left: 2.674515e-04	ci right 3.073453e-04	k: 809	n:2820000
ZNF443   2820000 perm   3466 sec   (814 perm/sec)   p_kst 2.868794e-04   p_cons 9.999915e-01   p_joint 1.928369e-03

Joint ci ratio: 5.302852e-02	ci left: 1.876096e-03	ci right 1.978638e-03	k: 5453	n:2830000
Cons ci ratio: 6.925820e-06	ci left: 9.999874e-01	ci right 9.999946e-01	k: 2829976	n:2830000
KS ci ratio: 1.374606e-01	ci left: 2.675300e-04	ci right 3.073558e-04	k: 812	n:2830000
ZNF443   2830000 perm   3488 sec   (811 perm/sec)   p_kst 2.869258e-04   p_cons 9.999915e-01   p_joint 1.926855e-03

Joint ci ratio: 5.293640e-02	ci left: 1.876091e-03	ci right 1.978450e-03	k: 5472	n:2840000
Cons ci ratio: 6.901433e-06	ci left: 9.999874e-01	ci right 9.999946e-01	k: 2839976	n:2840000
KS ci ratio: 1.373762e-01	ci left: 2.669280e-04	ci right 3.066378e-04	k: 813	n:2840000
ZNF443   2840000 perm   3510 sec   (809 perm/sec)   p_kst 2.862676e-04   p_cons 9.999915e-01   p_joint 1.926761e-03

Joint ci ratio: 5.282548e-02	ci left: 1.877472e-03	ci right 1.979685e-03	k: 5495	n:2850000
Cons ci ratio: 6.877217e-06	ci left: 9.999875e-01	ci right 9.999946e-01	k: 2849976	n:2850000
KS ci ratio: 1.372078e-01	ci left: 2.666691e-04	ci right 3.062877e-04	k: 815	n:2850000
ZNF443   2850000 perm   3533 sec   (807 perm/sec)   p_kst 2.859649e-04   p_cons 9.999916e-01   p_joint 1.928070e-03

Joint ci ratio: 5.275358e-02	ci left: 1.876083e-03	ci right 1.978077e-03	k: 5510	n:2860000
Cons ci ratio: 6.853171e-06	ci left: 9.999875e-01	ci right 9.999946e-01	k: 2859976	n:2860000
KS ci ratio: 1.369562e-01	ci left: 2.667496e-04	ci right 3.063017e-04	k: 818	n:2860000
ZNF443   2860000 perm   3557 sec   (804 perm/sec)   p_kst 2.860140e-04   p_cons 9.999916e-01   p_joint 1.926573e-03

Joint ci ratio: 5.263904e-02	ci left: 1.877798e-03	ci right 1.979657e-03	k: 5534	n:2870000
Cons ci ratio: 6.829292e-06	ci left: 9.999876e-01	ci right 9.999946e-01	k: 2869976	n:2870000
KS ci ratio: 1.367061e-01	ci left: 2.668297e-04	ci right 3.063155e-04	k: 821	n:2870000
ZNF443   2870000 perm   3579 sec   (802 perm/sec)   p_kst 2.860627e-04   p_cons 9.999916e-01   p_joint 1.928223e-03

Joint ci ratio: 5.117768e-02	ci left: 1.980950e-03	ci right 2.085333e-03	k: 5854	n:2880000
Cons ci ratio: 6.805579e-06	ci left: 9.999876e-01	ci right 9.999947e-01	k: 2879976	n:2880000
KS ci ratio: 1.363747e-01	ci left: 2.672447e-04	ci right 3.066882e-04	k: 825	n:2880000
ZNF443   2880000 perm   3601 sec   (800 perm/sec)   p_kst 2.864583e-04   p_cons 9.999917e-01   p_joint 2.032639e-03

Joint ci ratio: 5.107744e-02	ci left: 1.981952e-03	ci right 2.086177e-03	k: 5877	n:2890000
Cons ci ratio: 6.782030e-06	ci left: 9.999876e-01	ci right 9.999947e-01	k: 2889976	n:2890000
KS ci ratio: 1.362099e-01	ci left: 2.669884e-04	ci right 3.063426e-04	k: 827	n:2890000
ZNF443   2890000 perm   3624 sec   (798 perm/sec)   p_kst 2.861592e-04   p_cons 9.999917e-01   p_joint 2.033564e-03

Joint ci ratio: 5.098210e-02	ci left: 1.982608e-03	ci right 2.086667e-03	k: 5899	n:2900000
Cons ci ratio: 6.758644e-06	ci left: 9.999877e-01	ci right 9.999947e-01	k: 2899976	n:2900000
KS ci ratio: 1.361277e-01	ci left: 2.664008e-04	ci right 3.056428e-04	k: 828	n:2900000
ZNF443   2900000 perm   3646 sec   (795 perm/sec)   p_kst 2.855172e-04   p_cons 9.999917e-01   p_joint 2.034138e-03

Joint ci ratio: 5.091747e-02	ci left: 1.980883e-03	ci right 2.084716e-03	k: 5914	n:2910000
Cons ci ratio: 6.735418e-06	ci left: 9.999877e-01	ci right 9.999947e-01	k: 2909976	n:2910000
KS ci ratio: 1.360458e-01	ci left: 2.658173e-04	ci right 3.049478e-04	k: 829	n:2910000
ZNF443   2910000 perm   3669 sec   (793 perm/sec)   p_kst 2.848797e-04   p_cons 9.999918e-01   p_joint 2.032302e-03

Joint ci ratio: 5.082731e-02	ci left: 1.981200e-03	ci right 2.084860e-03	k: 5935	n:2920000
Cons ci ratio: 6.712352e-06	ci left: 9.999878e-01	ci right 9.999947e-01	k: 2919976	n:2920000
KS ci ratio: 1.358822e-01	ci left: 2.655686e-04	ci right 3.046117e-04	k: 831	n:2920000
ZNF443   2920000 perm   3693 sec   (791 perm/sec)   p_kst 2.845890e-04   p_cons 9.999918e-01   p_joint 2.032534e-03

Joint ci ratio: 5.163118e-02	ci left: 1.912779e-03	ci right 2.014489e-03	k: 5752	n:2930000
Cons ci ratio: 6.689443e-06	ci left: 9.999878e-01	ci right 9.999948e-01	k: 2929976	n:2930000
KS ci ratio: 1.358006e-01	ci left: 2.649919e-04	ci right 3.039250e-04	k: 832	n:2930000
ZNF443   2930000 perm   3716 sec   (789 perm/sec)   p_kst 2.839590e-04   p_cons 9.999918e-01   p_joint 1.963140e-03

Joint ci ratio: 5.151931e-02	ci left: 1.914667e-03	ci right 2.016250e-03	k: 5777	n:2940000
Cons ci ratio: 6.666689e-06	ci left: 9.999879e-01	ci right 9.999948e-01	k: 2939976	n:2940000
KS ci ratio: 1.356379e-01	ci left: 2.647477e-04	ci right 3.035946e-04	k: 834	n:2940000
ZNF443   2940000 perm   3739 sec   (786 perm/sec)   p_kst 2.836735e-04   p_cons 9.999918e-01   p_joint 1.964966e-03

Joint ci ratio: 5.142593e-02	ci left: 1.915203e-03	ci right 2.016626e-03	k: 5798	n:2950000
Cons ci ratio: 6.644090e-06	ci left: 9.999879e-01	ci right 9.999948e-01	k: 2949976	n:2950000
KS ci ratio: 1.353949e-01	ci left: 2.648328e-04	ci right 3.036169e-04	k: 837	n:2950000
ZNF443   2950000 perm   3762 sec   (784 perm/sec)   p_kst 2.837288e-04   p_cons 9.999919e-01   p_joint 1.965424e-03

Joint ci ratio: 5.141278e-02	ci left: 1.909733e-03	ci right 2.010839e-03	k: 5801	n:2960000
Cons ci ratio: 6.621644e-06	ci left: 9.999879e-01	ci right 9.999948e-01	k: 2959976	n:2960000
KS ci ratio: 1.352336e-01	ci left: 2.645909e-04	ci right 3.032897e-04	k: 839	n:2960000
ZNF443   2960000 perm   3785 sec   (782 perm/sec)   p_kst 2.834459e-04   p_cons 9.999919e-01   p_joint 1.959797e-03

Joint ci ratio: 5.127588e-02	ci left: 1.913607e-03	ci right 2.014641e-03	k: 5832	n:2970000
Cons ci ratio: 6.599349e-06	ci left: 9.999880e-01	ci right 9.999948e-01	k: 2969976	n:2970000
KS ci ratio: 1.345941e-01	ci left: 2.663027e-04	ci right 3.050529e-04	k: 847	n:2970000
ZNF443   2970000 perm   3808 sec   (780 perm/sec)   p_kst 2.851852e-04   p_cons 9.999919e-01   p_joint 1.963636e-03

Joint ci ratio: 5.120573e-02	ci left: 1.912486e-03	ci right 2.013318e-03	k: 5848	n:2980000
Cons ci ratio: 6.577203e-06	ci left: 9.999880e-01	ci right 9.999948e-01	k: 2979976	n:2980000
KS ci ratio: 1.345942e-01	ci left: 2.654090e-04	ci right 3.040293e-04	k: 847	n:2980000
ZNF443   2980000 perm   3831 sec   (778 perm/sec)   p_kst 2.842282e-04   p_cons 9.999919e-01   p_joint 1.962416e-03

Joint ci ratio: 5.113150e-02	ci left: 1.911703e-03	ci right 2.012343e-03	k: 5865	n:2990000
Cons ci ratio: 6.555206e-06	ci left: 9.999881e-01	ci right 9.999949e-01	k: 2989976	n:2990000
KS ci ratio: 1.344358e-01	ci left: 2.651678e-04	ci right 3.037038e-04	k: 849	n:2990000
ZNF443   2990000 perm   3854 sec   (776 perm/sec)   p_kst 2.839465e-04   p_cons 9.999920e-01   p_joint 1.961538e-03

Joint ci ratio: 5.107064e-02	ci left: 1.909937e-03	ci right 2.010361e-03	k: 5879	n:3000000
Cons ci ratio: 6.533355e-06	ci left: 9.999881e-01	ci right 9.999949e-01	k: 2999976	n:3000000
KS ci ratio: 1.342779e-01	ci left: 2.649281e-04	ci right 3.033806e-04	k: 851	n:3000000
ZNF443   3000000 perm   3877 sec   (774 perm/sec)   p_kst 2.836667e-04   p_cons 9.999920e-01   p_joint 1.959667e-03

Joint ci ratio: 5.097102e-02	ci left: 1.911136e-03	ci right 2.011421e-03	k: 5902	n:3010000
Cons ci ratio: 6.511650e-06	ci left: 9.999881e-01	ci right 9.999949e-01	k: 3009976	n:3010000
KS ci ratio: 1.341992e-01	ci left: 2.643690e-04	ci right 3.027160e-04	k: 852	n:3010000
ZNF443   3010000 perm   3901 sec   (772 perm/sec)   p_kst 2.830565e-04   p_cons 9.999920e-01   p_joint 1.960797e-03

Joint ci ratio: 5.102752e-02	ci left: 1.900557e-03	ci right 2.000401e-03	k: 5889	n:3020000
Cons ci ratio: 6.490088e-06	ci left: 9.999882e-01	ci right 9.999949e-01	k: 3019976	n:3020000
KS ci ratio: 1.341206e-01	ci left: 2.638137e-04	ci right 3.020559e-04	k: 853	n:3020000
ZNF443   3020000 perm   3924 sec   (770 perm/sec)   p_kst 2.824503e-04   p_cons 9.999921e-01   p_joint 1.950000e-03

Joint ci ratio: 5.093246e-02	ci left: 1.901453e-03	ci right 2.001153e-03	k: 5911	n:3030000
Cons ci ratio: 6.468668e-06	ci left: 9.999882e-01	ci right 9.999949e-01	k: 3029976	n:3030000
KS ci ratio: 1.339639e-01	ci left: 2.635809e-04	ci right 3.017412e-04	k: 855	n:3030000
ZNF443   3030000 perm   3947 sec   (768 perm/sec)   p_kst 2.821782e-04   p_cons 9.999921e-01   p_joint 1.950825e-03

Joint ci ratio: 5.082936e-02	ci left: 1.902993e-03	ci right 2.002565e-03	k: 5935	n:3040000
Cons ci ratio: 6.447390e-06	ci left: 9.999883e-01	ci right 9.999949e-01	k: 3039976	n:3040000
KS ci ratio: 1.337298e-01	ci left: 2.636677e-04	ci right 3.017685e-04	k: 858	n:3040000
ZNF443   3040000 perm   3971 sec   (766 perm/sec)   p_kst 2.822368e-04   p_cons 9.999921e-01   p_joint 1.952303e-03

Joint ci ratio: 5.077385e-02	ci left: 1.900961e-03	ci right 2.000316e-03	k: 5948	n:3050000
Cons ci ratio: 6.426251e-06	ci left: 9.999883e-01	ci right 9.999950e-01	k: 3049976	n:3050000
KS ci ratio: 1.335744e-01	ci left: 2.634370e-04	ci right 3.014567e-04	k: 860	n:3050000
ZNF443   3050000 perm   3994 sec   (764 perm/sec)   p_kst 2.819672e-04   p_cons 9.999921e-01   p_joint 1.950164e-03

Joint ci ratio: 5.070573e-02	ci left: 1.899912e-03	ci right 1.999074e-03	k: 5964	n:3060000
Cons ci ratio: 6.405250e-06	ci left: 9.999883e-01	ci right 9.999950e-01	k: 3059976	n:3060000
KS ci ratio: 1.333423e-01	ci left: 2.635237e-04	ci right 3.014847e-04	k: 863	n:3060000
ZNF443   3060000 perm   4018 sec   (762 perm/sec)   p_kst 2.820261e-04   p_cons 9.999922e-01   p_joint 1.949020e-03

Joint ci ratio: 5.058707e-02	ci left: 1.902728e-03	ci right 2.001798e-03	k: 5992	n:3070000
Cons ci ratio: 6.384386e-06	ci left: 9.999884e-01	ci right 9.999950e-01	k: 3069976	n:3070000
KS ci ratio: 1.329580e-01	ci left: 2.642398e-04	ci right 3.021855e-04	k: 868	n:3070000
ZNF443   3070000 perm   4041 sec   (760 perm/sec)   p_kst 2.827362e-04   p_cons 9.999922e-01   p_joint 1.951792e-03

Joint ci ratio: 5.887337e-02	ci left: 1.395015e-03	ci right 1.479953e-03	k: 4426	n:3080000
Cons ci ratio: 6.489683e-06	ci left: 9.999880e-01	ci right 9.999947e-01	k: 3079975	n:3080000
KS ci ratio: 1.363759e-01	ci left: 2.498910e-04	ci right 2.867735e-04	k: 825	n:3080000
ZNF443   3080000 perm   4065 sec   (758 perm/sec)   p_kst 2.678571e-04   p_cons 9.999919e-01   p_joint 1.437013e-03

Joint ci ratio: 5.875401e-02	ci left: 1.396240e-03	ci right 1.481074e-03	k: 4444	n:3090000
Cons ci ratio: 6.468681e-06	ci left: 9.999881e-01	ci right 9.999948e-01	k: 3089975	n:3090000
KS ci ratio: 1.361289e-01	ci left: 2.500200e-04	ci right 2.868494e-04	k: 828	n:3090000
ZNF443   3090000 perm   4089 sec   (756 perm/sec)   p_kst 2.679612e-04   p_cons 9.999919e-01   p_joint 1.438188e-03

Joint ci ratio: 5.869467e-02	ci left: 1.394597e-03	ci right 1.479242e-03	k: 4453	n:3100000
Cons ci ratio: 6.447814e-06	ci left: 9.999881e-01	ci right 9.999948e-01	k: 3099975	n:3100000
KS ci ratio: 1.359650e-01	ci left: 2.498367e-04	ci right 2.865912e-04	k: 830	n:3100000
ZNF443   3100000 perm   4113 sec   (754 perm/sec)   p_kst 2.677419e-04   p_cons 9.999919e-01   p_joint 1.436452e-03

Joint ci ratio: 5.861579e-02	ci left: 1.393914e-03	ci right 1.478401e-03	k: 4465	n:3110000
Cons ci ratio: 6.427082e-06	ci left: 9.999881e-01	ci right 9.999948e-01	k: 3109975	n:3110000
KS ci ratio: 1.358017e-01	ci left: 2.496546e-04	ci right 2.863346e-04	k: 832	n:3110000
ZNF443   3110000 perm   4137 sec   (752 perm/sec)   p_kst 2.675241e-04   p_cons 9.999920e-01   p_joint 1.435691e-03

Joint ci ratio: 5.844579e-02	ci left: 1.397658e-03	ci right 1.482118e-03	k: 4491	n:3120000
Cons ci ratio: 6.406482e-06	ci left: 9.999882e-01	ci right 9.999948e-01	k: 3119975	n:3120000
KS ci ratio: 1.353152e-01	ci left: 2.507123e-04	ci right 2.874051e-04	k: 838	n:3120000
ZNF443   3120000 perm   4161 sec   (750 perm/sec)   p_kst 2.685897e-04   p_cons 9.999920e-01   p_joint 1.439423e-03

Joint ci ratio: 5.835493e-02	ci left: 1.397600e-03	ci right 1.481921e-03	k: 4505	n:3130000
Cons ci ratio: 6.386014e-06	ci left: 9.999882e-01	ci right 9.999948e-01	k: 3129975	n:3130000
KS ci ratio: 1.350739e-01	ci left: 2.508374e-04	ci right 2.874778e-04	k: 841	n:3130000
ZNF443   3130000 perm   4185 sec   (748 perm/sec)   p_kst 2.686901e-04   p_cons 9.999920e-01   p_joint 1.439297e-03

Joint ci ratio: 5.849825e-02	ci left: 1.386245e-03	ci right 1.470093e-03	k: 4483	n:3140000
Cons ci ratio: 6.365676e-06	ci left: 9.999882e-01	ci right 9.999948e-01	k: 3139975	n:3140000
KS ci ratio: 1.349938e-01	ci left: 2.503462e-04	ci right 2.868915e-04	k: 842	n:3140000
ZNF443   3140000 perm   4209 sec   (746 perm/sec)   p_kst 2.681529e-04   p_cons 9.999920e-01   p_joint 1.427707e-03

Joint ci ratio: 5.860975e-02	ci left: 1.376526e-03	ci right 1.459950e-03	k: 4466	n:3150000
Cons ci ratio: 6.345468e-06	ci left: 9.999883e-01	ci right 9.999949e-01	k: 3149975	n:3150000
KS ci ratio: 1.347543e-01	ci left: 2.504717e-04	ci right 2.869652e-04	k: 845	n:3150000
ZNF443   3150000 perm   4234 sec   (744 perm/sec)   p_kst 2.682540e-04   p_cons 9.999921e-01   p_joint 1.417778e-03

Joint ci ratio: 5.853120e-02	ci left: 1.375912e-03	ci right 1.459183e-03	k: 4478	n:3160000
Cons ci ratio: 6.325387e-06	ci left: 9.999883e-01	ci right 9.999949e-01	k: 3159975	n:3160000
KS ci ratio: 1.345160e-01	ci left: 2.505965e-04	ci right 2.870384e-04	k: 848	n:3160000
ZNF443   3160000 perm   4258 sec   (742 perm/sec)   p_kst 2.683544e-04   p_cons 9.999921e-01   p_joint 1.417089e-03

Joint ci ratio: 5.863631e-02	ci left: 1.366598e-03	ci right 1.449459e-03	k: 4462	n:3170000
Cons ci ratio: 6.425548e-06	ci left: 9.999880e-01	ci right 9.999946e-01	k: 3169974	n:3170000
KS ci ratio: 1.342002e-01	ci left: 2.510254e-04	ci right 2.874371e-04	k: 852	n:3170000
ZNF443   3170000 perm   4282 sec   (740 perm/sec)   p_kst 2.687697e-04   p_cons 9.999918e-01   p_joint 1.407571e-03

Joint ci ratio: 5.858388e-02	ci left: 1.364779e-03	ci right 1.447454e-03	k: 4470	n:3180000
Cons ci ratio: 6.405342e-06	ci left: 9.999880e-01	ci right 9.999947e-01	k: 3179974	n:3180000
KS ci ratio: 1.340431e-01	ci left: 2.508438e-04	ci right 2.871833e-04	k: 854	n:3180000
ZNF443   3180000 perm   4307 sec   (738 perm/sec)   p_kst 2.685535e-04   p_cons 9.999918e-01   p_joint 1.405660e-03

Joint ci ratio: 5.851851e-02	ci left: 1.363590e-03	ci right 1.446097e-03	k: 4480	n:3190000
Cons ci ratio: 6.385263e-06	ci left: 9.999881e-01	ci right 9.999947e-01	k: 3189974	n:3190000
KS ci ratio: 1.339648e-01	ci left: 2.503604e-04	ci right 2.866070e-04	k: 855	n:3190000
ZNF443   3190000 perm   4331 sec   (736 perm/sec)   p_kst 2.680251e-04   p_cons 9.999918e-01   p_joint 1.404389e-03

Joint ci ratio: 5.918367e-02	ci left: 1.328538e-03	ci right 1.409869e-03	k: 4380	n:3200000
Cons ci ratio: 6.365309e-06	ci left: 9.999881e-01	ci right 9.999947e-01	k: 3199974	n:3200000
KS ci ratio: 1.337307e-01	ci left: 2.504842e-04	ci right 2.866802e-04	k: 858	n:3200000
ZNF443   3200000 perm   4356 sec   (735 perm/sec)   p_kst 2.681250e-04   p_cons 9.999919e-01   p_joint 1.368750e-03

Joint ci ratio: 5.911627e-02	ci left: 1.327468e-03	ci right 1.408638e-03	k: 4390	n:3210000
Cons ci ratio: 6.345479e-06	ci left: 9.999881e-01	ci right 9.999947e-01	k: 3209974	n:3210000
KS ci ratio: 1.335753e-01	ci left: 2.503061e-04	ci right 2.864310e-04	k: 860	n:3210000
ZNF443   3210000 perm   4381 sec   (733 perm/sec)   p_kst 2.679128e-04   p_cons 9.999919e-01   p_joint 1.367601e-03

Joint ci ratio: 5.902896e-02	ci left: 1.327323e-03	ci right 1.408360e-03	k: 4403	n:3220000
Cons ci ratio: 6.325772e-06	ci left: 9.999882e-01	ci right 9.999947e-01	k: 3219974	n:3220000
KS ci ratio: 1.334978e-01	ci left: 2.498289e-04	ci right 2.858624e-04	k: 861	n:3220000
ZNF443   3220000 perm   4405 sec   (731 perm/sec)   p_kst 2.673913e-04   p_cons 9.999919e-01   p_joint 1.367391e-03

Joint ci ratio: 5.894872e-02	ci left: 1.326874e-03	ci right 1.407770e-03	k: 4415	n:3230000
Cons ci ratio: 6.306188e-06	ci left: 9.999882e-01	ci right 9.999947e-01	k: 3229974	n:3230000
KS ci ratio: 1.332661e-01	ci left: 2.499532e-04	ci right 2.859371e-04	k: 864	n:3230000
ZNF443   3230000 perm   4430 sec   (729 perm/sec)   p_kst 2.674923e-04   p_cons 9.999920e-01   p_joint 1.366873e-03

Joint ci ratio: 5.883555e-02	ci left: 1.327949e-03	ci right 1.408749e-03	k: 4432	n:3240000
Cons ci ratio: 6.286724e-06	ci left: 9.999882e-01	ci right 9.999948e-01	k: 3239974	n:3240000
KS ci ratio: 1.328826e-01	ci left: 2.506736e-04	ci right 2.866492e-04	k: 869	n:3240000
ZNF443   3240000 perm   4455 sec   (727 perm/sec)   p_kst 2.682099e-04   p_cons 9.999920e-01   p_joint 1.367901e-03

Joint ci ratio: 5.883568e-02	ci left: 1.323863e-03	ci right 1.404415e-03	k: 4432	n:3250000
Cons ci ratio: 6.267380e-06	ci left: 9.999883e-01	ci right 9.999948e-01	k: 3249974	n:3250000
KS ci ratio: 1.327301e-01	ci left: 2.504972e-04	ci right 2.864030e-04	k: 871	n:3250000
ZNF443   3250000 perm   4480 sec   (725 perm/sec)   p_kst 2.680000e-04   p_cons 9.999920e-01   p_joint 1.363692e-03

Joint ci ratio: 5.872976e-02	ci left: 1.324638e-03	ci right 1.405087e-03	k: 4448	n:3260000
Cons ci ratio: 6.248155e-06	ci left: 9.999883e-01	ci right 9.999948e-01	k: 3259974	n:3260000
KS ci ratio: 1.324267e-01	ci left: 2.509152e-04	ci right 2.867921e-04	k: 875	n:3260000
ZNF443   3260000 perm   4505 sec   (724 perm/sec)   p_kst 2.684049e-04   p_cons 9.999920e-01   p_joint 1.364417e-03

Joint ci ratio: 5.895590e-02	ci left: 1.310342e-03	ci right 1.390240e-03	k: 4414	n:3270000
Cons ci ratio: 6.455634e-06	ci left: 9.999876e-01	ci right 9.999943e-01	k: 3269972	n:3270000
KS ci ratio: 1.321254e-01	ci left: 2.513306e-04	ci right 2.871788e-04	k: 879	n:3270000
ZNF443   3270000 perm   4531 sec   (722 perm/sec)   p_kst 2.688073e-04   p_cons 9.999914e-01   p_joint 1.349847e-03

Joint ci ratio: 5.884269e-02	ci left: 1.311454e-03	ci right 1.391260e-03	k: 4431	n:3280000
Cons ci ratio: 6.435952e-06	ci left: 9.999877e-01	ci right 9.999943e-01	k: 3279972	n:3280000
KS ci ratio: 1.319755e-01	ci left: 2.511540e-04	ci right 2.869331e-04	k: 881	n:3280000
ZNF443   3280000 perm   4556 sec   (720 perm/sec)   p_kst 2.685976e-04   p_cons 9.999915e-01   p_joint 1.350915e-03

Joint ci ratio: 5.518539e-02	ci left: 1.489042e-03	ci right 1.573845e-03	k: 5037	n:3290000
Cons ci ratio: 6.416390e-06	ci left: 9.999877e-01	ci right 9.999943e-01	k: 3289972	n:3290000
KS ci ratio: 1.317516e-01	ci left: 2.512723e-04	ci right 2.870029e-04	k: 884	n:3290000
ZNF443   3290000 perm   4581 sec   (718 perm/sec)   p_kst 2.686930e-04   p_cons 9.999915e-01   p_joint 1.531003e-03

Joint ci ratio: 5.511435e-02	ci left: 1.488415e-03	ci right 1.573069e-03	k: 5050	n:3300000
Cons ci ratio: 6.396946e-06	ci left: 9.999877e-01	ci right 9.999944e-01	k: 3299972	n:3300000
KS ci ratio: 1.316030e-01	ci left: 2.510970e-04	ci right 2.867592e-04	k: 886	n:3300000
ZNF443   3300000 perm   4607 sec   (716 perm/sec)   p_kst 2.684848e-04   p_cons 9.999915e-01   p_joint 1.530303e-03

Joint ci ratio: 5.648039e-02	ci left: 1.412123e-03	ci right 1.494493e-03	k: 4809	n:3310000
Cons ci ratio: 6.377620e-06	ci left: 9.999878e-01	ci right 9.999944e-01	k: 3309972	n:3310000
KS ci ratio: 1.313072e-01	ci left: 2.515071e-04	ci right 2.871410e-04	k: 890	n:3310000
ZNF443   3310000 perm   4632 sec   (715 perm/sec)   p_kst 2.688822e-04   p_cons 9.999915e-01   p_joint 1.452870e-03

Joint ci ratio: 5.640423e-02	ci left: 1.411730e-03	ci right 1.493963e-03	k: 4822	n:3320000
Cons ci ratio: 6.358410e-06	ci left: 9.999878e-01	ci right 9.999944e-01	k: 3319972	n:3320000
KS ci ratio: 1.311601e-01	ci left: 2.513322e-04	ci right 2.868983e-04	k: 892	n:3320000
ZNF443   3320000 perm   4658 sec   (713 perm/sec)   p_kst 2.686747e-04   p_cons 9.999916e-01   p_joint 1.452410e-03

Joint ci ratio: 5.681878e-02	ci left: 1.386766e-03	ci right 1.468159e-03	k: 4752	n:3330000
Cons ci ratio: 6.339316e-06	ci left: 9.999878e-01	ci right 9.999944e-01	k: 3329972	n:3330000
KS ci ratio: 1.309404e-01	ci left: 2.514488e-04	ci right 2.869672e-04	k: 895	n:3330000
ZNF443   3330000 perm   4684 sec   (711 perm/sec)   p_kst 2.687688e-04   p_cons 9.999916e-01   p_joint 1.427027e-03

Joint ci ratio: 5.670552e-02	ci left: 1.388222e-03	ci right 1.469532e-03	k: 4771	n:3340000
Cons ci ratio: 6.320336e-06	ci left: 9.999879e-01	ci right 9.999944e-01	k: 3339972	n:3340000
KS ci ratio: 1.306490e-01	ci left: 2.518544e-04	ci right 2.873448e-04	k: 899	n:3340000
ZNF443   3340000 perm   4709 sec   (709 perm/sec)   p_kst 2.691617e-04   p_cons 9.999916e-01   p_joint 1.428443e-03

Joint ci ratio: 5.661068e-02	ci left: 1.388787e-03	ci right 1.469989e-03	k: 4787	n:3350000
Cons ci ratio: 6.301469e-06	ci left: 9.999879e-01	ci right 9.999944e-01	k: 3349972	n:3350000
KS ci ratio: 1.305766e-01	ci left: 2.513914e-04	ci right 2.867953e-04	k: 900	n:3350000
ZNF443   3350000 perm   4735 sec   (708 perm/sec)   p_kst 2.686567e-04   p_cons 9.999916e-01   p_joint 1.428955e-03

Joint ci ratio: 5.669386e-02	ci left: 1.380546e-03	ci right 1.461389e-03	k: 4773	n:3360000
Cons ci ratio: 6.282715e-06	ci left: 9.999880e-01	ci right 9.999945e-01	k: 3359972	n:3360000
KS ci ratio: 1.304319e-01	ci left: 2.512190e-04	ci right 2.865564e-04	k: 902	n:3360000
ZNF443   3360000 perm   4760 sec   (706 perm/sec)   p_kst 2.684524e-04   p_cons 9.999917e-01   p_joint 1.420536e-03

Joint ci ratio: 5.680730e-02	ci left: 1.370891e-03	ci right 1.451335e-03	k: 4754	n:3370000
Cons ci ratio: 6.264072e-06	ci left: 9.999880e-01	ci right 9.999945e-01	k: 3369972	n:3370000
KS ci ratio: 1.302158e-01	ci left: 2.513347e-04	ci right 2.866253e-04	k: 905	n:3370000
ZNF443   3370000 perm   4786 sec   (704 perm/sec)   p_kst 2.685460e-04   p_cons 9.999917e-01   p_joint 1.410682e-03

Joint ci ratio: 5.744610e-02	ci left: 1.336213e-03	ci right 1.415533e-03	k: 4649	n:3380000
Cons ci ratio: 6.245539e-06	ci left: 9.999880e-01	ci right 9.999945e-01	k: 3379972	n:3380000
KS ci ratio: 1.300007e-01	ci left: 2.514498e-04	ci right 2.866937e-04	k: 908	n:3380000
ZNF443   3380000 perm   4811 sec   (703 perm/sec)   p_kst 2.686391e-04   p_cons 9.999917e-01   p_joint 1.375444e-03

Joint ci ratio: 5.736598e-02	ci left: 1.336051e-03	ci right 1.415247e-03	k: 4662	n:3390000
Cons ci ratio: 6.227115e-06	ci left: 9.999881e-01	ci right 9.999945e-01	k: 3389972	n:3390000
KS ci ratio: 1.298579e-01	ci left: 2.512788e-04	ci right 2.864572e-04	k: 910	n:3390000
ZNF443   3390000 perm   4837 sec   (701 perm/sec)   p_kst 2.684366e-04   p_cons 9.999917e-01   p_joint 1.375221e-03

Joint ci ratio: 5.729846e-02	ci left: 1.335311e-03	ci right 1.414366e-03	k: 4673	n:3400000
Cons ci ratio: 6.208800e-06	ci left: 9.999881e-01	ci right 9.999945e-01	k: 3399972	n:3400000
KS ci ratio: 1.296446e-01	ci left: 2.513935e-04	ci right 2.865256e-04	k: 913	n:3400000
ZNF443   3400000 perm   4864 sec   (699 perm/sec)   p_kst 2.685294e-04   p_cons 9.999918e-01   p_joint 1.374412e-03

Joint ci ratio: 5.716401e-02	ci left: 1.337754e-03	ci right 1.416762e-03	k: 4695	n:3410000
Cons ci ratio: 6.190592e-06	ci left: 9.999881e-01	ci right 9.999945e-01	k: 3409972	n:3410000
KS ci ratio: 1.295738e-01	ci left: 2.509400e-04	ci right 2.859881e-04	k: 914	n:3410000
ZNF443   3410000 perm   4890 sec   (697 perm/sec)   p_kst 2.680352e-04   p_cons 9.999918e-01   p_joint 1.376833e-03

Joint ci ratio: 5.711543e-02	ci left: 1.336148e-03	ci right 1.414992e-03	k: 4703	n:3420000
Cons ci ratio: 6.172491e-06	ci left: 9.999882e-01	ci right 9.999946e-01	k: 3419972	n:3420000
KS ci ratio: 1.295738e-01	ci left: 2.502063e-04	ci right 2.851519e-04	k: 914	n:3420000
ZNF443   3420000 perm   4916 sec   (696 perm/sec)   p_kst 2.672515e-04   p_cons 9.999918e-01   p_joint 1.375146e-03

Joint ci ratio: 5.701248e-02	ci left: 1.337138e-03	ci right 1.415894e-03	k: 4720	n:3430000
Cons ci ratio: 6.154496e-06	ci left: 9.999882e-01	ci right 9.999946e-01	k: 3429972	n:3430000
KS ci ratio: 1.294325e-01	ci left: 2.500410e-04	ci right 2.849225e-04	k: 916	n:3430000
ZNF443   3430000 perm   4942 sec   (694 perm/sec)   p_kst 2.670554e-04   p_cons 9.999918e-01   p_joint 1.376093e-03

Joint ci ratio: 5.694017e-02	ci left: 1.336690e-03	ci right 1.415316e-03	k: 4732	n:3440000
Cons ci ratio: 6.136605e-06	ci left: 9.999882e-01	ci right 9.999946e-01	k: 3439972	n:3440000
KS ci ratio: 1.292916e-01	ci left: 2.498767e-04	ci right 2.846945e-04	k: 918	n:3440000
ZNF443   3440000 perm   4969 sec   (692 perm/sec)   p_kst 2.668605e-04   p_cons 9.999919e-01   p_joint 1.375581e-03

Joint ci ratio: 5.685614e-02	ci left: 1.336816e-03	ci right 1.415329e-03	k: 4746	n:3450000
Cons ci ratio: 6.118817e-06	ci left: 9.999883e-01	ci right 9.999946e-01	k: 3449972	n:3450000
KS ci ratio: 1.291511e-01	ci left: 2.497134e-04	ci right 2.844677e-04	k: 920	n:3450000
ZNF443   3450000 perm   4995 sec   (691 perm/sec)   p_kst 2.666667e-04   p_cons 9.999919e-01   p_joint 1.375652e-03

Joint ci ratio: 5.723174e-02	ci left: 1.315288e-03	ci right 1.393065e-03	k: 4684	n:3460000
Cons ci ratio: 6.101133e-06	ci left: 9.999883e-01	ci right 9.999946e-01	k: 3459972	n:3460000
KS ci ratio: 1.288716e-01	ci left: 2.501105e-04	ci right 2.848389e-04	k: 924	n:3460000
ZNF443   3460000 perm   5021 sec   (689 perm/sec)   p_kst 2.670520e-04   p_cons 9.999919e-01   p_joint 1.353757e-03

Joint ci ratio: 5.712208e-02	ci left: 1.316611e-03	ci right 1.394311e-03	k: 4702	n:3470000
Cons ci ratio: 6.083550e-06	ci left: 9.999883e-01	ci right 9.999946e-01	k: 3469972	n:3470000
KS ci ratio: 1.285246e-01	ci left: 2.507842e-04	ci right 2.855053e-04	k: 929	n:3470000
ZNF443   3470000 perm   5048 sec   (687 perm/sec)   p_kst 2.677233e-04   p_cons 9.999919e-01   p_joint 1.355043e-03

Joint ci ratio: 5.701304e-02	ci left: 1.317926e-03	ci right 1.395551e-03	k: 4720	n:3480000
Cons ci ratio: 6.066069e-06	ci left: 9.999884e-01	ci right 9.999947e-01	k: 3479972	n:3480000
KS ci ratio: 1.283178e-01	ci left: 2.508980e-04	ci right 2.855747e-04	k: 932	n:3480000
ZNF443   3480000 perm   5074 sec   (686 perm/sec)   p_kst 2.678161e-04   p_cons 9.999920e-01   p_joint 1.356322e-03

Joint ci ratio: 5.688660e-02	ci left: 1.320081e-03	ci right 1.397655e-03	k: 4741	n:3490000
Cons ci ratio: 6.048687e-06	ci left: 9.999884e-01	ci right 9.999947e-01	k: 3489972	n:3490000
KS ci ratio: 1.278391e-01	ci left: 2.521205e-04	ci right 2.868263e-04	k: 939	n:3490000
ZNF443   3490000 perm   5101 sec   (684 perm/sec)   p_kst 2.690544e-04   p_cons 9.999920e-01   p_joint 1.358453e-03

Joint ci ratio: 5.682076e-02	ci left: 1.319408e-03	ci right 1.396849e-03	k: 4752	n:3500000
Cons ci ratio: 6.134515e-06	ci left: 9.999881e-01	ci right 9.999945e-01	k: 3499971	n:3500000
KS ci ratio: 1.277033e-01	ci left: 2.519533e-04	ci right 2.865965e-04	k: 941	n:3500000
ZNF443   3500000 perm   5128 sec   (683 perm/sec)   p_kst 2.688571e-04   p_cons 9.999917e-01   p_joint 1.357714e-03

Joint ci ratio: 5.499706e-02	ci left: 1.405545e-03	ci right 1.485310e-03	k: 5072	n:3510000
Cons ci ratio: 6.117037e-06	ci left: 9.999881e-01	ci right 9.999945e-01	k: 3509971	n:3510000
KS ci ratio: 1.275680e-01	ci left: 2.517871e-04	ci right 2.863680e-04	k: 943	n:3510000
ZNF443   3510000 perm   5155 sec   (681 perm/sec)   p_kst 2.686610e-04   p_cons 9.999917e-01   p_joint 1.445014e-03

Joint ci ratio: 5.491053e-02	ci left: 1.406035e-03	ci right 1.485698e-03	k: 5088	n:3520000
Cons ci ratio: 6.099659e-06	ci left: 9.999882e-01	ci right 9.999945e-01	k: 3519971	n:3520000
KS ci ratio: 1.274330e-01	ci left: 2.516219e-04	ci right 2.861407e-04	k: 945	n:3520000
ZNF443   3520000 perm   5181 sec   (679 perm/sec)   p_kst 2.684659e-04   p_cons 9.999918e-01   p_joint 1.445455e-03

Joint ci ratio: 5.486747e-02	ci left: 1.404287e-03	ci right 1.483787e-03	k: 5096	n:3530000
Cons ci ratio: 6.082380e-06	ci left: 9.999882e-01	ci right 9.999945e-01	k: 3529971	n:3530000
KS ci ratio: 1.274331e-01	ci left: 2.509091e-04	ci right 2.853302e-04	k: 945	n:3530000
ZNF443   3530000 perm   5208 sec   (678 perm/sec)   p_kst 2.677054e-04   p_cons 9.999918e-01   p_joint 1.443626e-03

Joint ci ratio: 5.479764e-02	ci left: 1.403942e-03	ci right 1.483318e-03	k: 5109	n:3540000
Cons ci ratio: 6.065198e-06	ci left: 9.999882e-01	ci right 9.999945e-01	k: 3539971	n:3540000
KS ci ratio: 1.272315e-01	ci left: 2.510208e-04	ci right 2.853986e-04	k: 948	n:3540000
ZNF443   3540000 perm   5236 sec   (676 perm/sec)   p_kst 2.677966e-04   p_cons 9.999918e-01   p_joint 1.443220e-03

Joint ci ratio: 5.515014e-02	ci left: 1.381928e-03	ci right 1.460579e-03	k: 5044	n:3550000
Cons ci ratio: 6.048113e-06	ci left: 9.999883e-01	ci right 9.999945e-01	k: 3549971	n:3550000
KS ci ratio: 1.269642e-01	ci left: 2.514046e-04	ci right 2.857572e-04	k: 952	n:3550000
ZNF443   3550000 perm   5263 sec   (675 perm/sec)   p_kst 2.681690e-04   p_cons 9.999918e-01   p_joint 1.420845e-03

Joint ci ratio: 5.509014e-02	ci left: 1.381094e-03	ci right 1.459608e-03	k: 5055	n:3560000
Cons ci ratio: 6.031123e-06	ci left: 9.999883e-01	ci right 9.999945e-01	k: 3559971	n:3560000
KS ci ratio: 1.268977e-01	ci left: 2.509704e-04	ci right 2.852443e-04	k: 953	n:3560000
ZNF443   3560000 perm   5290 sec   (673 perm/sec)   p_kst 2.676966e-04   p_cons 9.999919e-01   p_joint 1.419944e-03

Joint ci ratio: 5.499231e-02	ci left: 1.382198e-03	ci right 1.460631e-03	k: 5073	n:3570000
Cons ci ratio: 6.014230e-06	ci left: 9.999883e-01	ci right 9.999946e-01	k: 3569971	n:3570000
KS ci ratio: 1.267649e-01	ci left: 2.508098e-04	ci right 2.850233e-04	k: 955	n:3570000
ZNF443   3570000 perm   5317 sec   (671 perm/sec)   p_kst 2.675070e-04   p_cons 9.999919e-01   p_joint 1.421008e-03

Joint ci ratio: 5.495447e-02	ci left: 1.380265e-03	ci right 1.458533e-03	k: 5080	n:3580000
Cons ci ratio: 5.997430e-06	ci left: 9.999884e-01	ci right 9.999946e-01	k: 3579971	n:3580000
KS ci ratio: 1.266986e-01	ci left: 2.503797e-04	ci right 2.845153e-04	k: 956	n:3580000
ZNF443   3580000 perm   5345 sec   (670 perm/sec)   p_kst 2.670391e-04   p_cons 9.999919e-01   p_joint 1.418994e-03

Joint ci ratio: 5.488970e-02	ci left: 1.379717e-03	ci right 1.457859e-03	k: 5092	n:3590000
Cons ci ratio: 5.980724e-06	ci left: 9.999884e-01	ci right 9.999946e-01	k: 3589971	n:3590000
KS ci ratio: 1.266325e-01	ci left: 2.499520e-04	ci right 2.840102e-04	k: 957	n:3590000
ZNF443   3590000 perm   5373 sec   (668 perm/sec)   p_kst 2.665738e-04   p_cons 9.999919e-01   p_joint 1.418384e-03

Joint ci ratio: 5.485208e-02	ci left: 1.377802e-03	ci right 1.455781e-03	k: 5099	n:3600000
Cons ci ratio: 6.062699e-06	ci left: 9.999881e-01	ci right 9.999944e-01	k: 3599970	n:3600000
KS ci ratio: 1.265665e-01	ci left: 2.495267e-04	ci right 2.835079e-04	k: 958	n:3600000
ZNF443   3600000 perm   5400 sec   (667 perm/sec)   p_kst 2.661111e-04   p_cons 9.999917e-01   p_joint 1.416389e-03

Joint ci ratio: 5.479304e-02	ci left: 1.376991e-03	ci right 1.454837e-03	k: 5110	n:3610000
Cons ci ratio: 6.142646e-06	ci left: 9.999878e-01	ci right 9.999942e-01	k: 3609969	n:3610000
KS ci ratio: 1.263690e-01	ci left: 2.496402e-04	ci right 2.835798e-04	k: 961	n:3610000
ZNF443   3610000 perm   5427 sec   (665 perm/sec)   p_kst 2.662050e-04   p_cons 9.999914e-01   p_joint 1.415512e-03

Joint ci ratio: 5.470212e-02	ci left: 1.377819e-03	ci right 1.455579e-03	k: 5127	n:3620000
Cons ci ratio: 6.125677e-06	ci left: 9.999878e-01	ci right 9.999942e-01	k: 3619969	n:3620000
KS ci ratio: 1.261724e-01	ci left: 2.497531e-04	ci right 2.836513e-04	k: 964	n:3620000
ZNF443   3620000 perm   5455 sec   (664 perm/sec)   p_kst 2.662983e-04   p_cons 9.999914e-01   p_joint 1.416298e-03

Joint ci ratio: 5.463292e-02	ci left: 1.377556e-03	ci right 1.455199e-03	k: 5140	n:3630000
Cons ci ratio: 6.203519e-06	ci left: 9.999876e-01	ci right 9.999940e-01	k: 3629968	n:3630000
KS ci ratio: 1.259117e-01	ci left: 2.501323e-04	ci right 2.840066e-04	k: 968	n:3630000
ZNF443   3630000 perm   5483 sec   (662 perm/sec)   p_kst 2.666667e-04   p_cons 9.999912e-01   p_joint 1.415978e-03

Joint ci ratio: 5.455869e-02	ci left: 1.377565e-03	ci right 1.455100e-03	k: 5154	n:3640000
Cons ci ratio: 6.186476e-06	ci left: 9.999876e-01	ci right 9.999940e-01	k: 3639968	n:3640000
KS ci ratio: 1.258468e-01	ci left: 2.497112e-04	ci right 2.835097e-04	k: 969	n:3640000
ZNF443   3640000 perm   5510 sec   (661 perm/sec)   p_kst 2.662088e-04   p_cons 9.999912e-01   p_joint 1.415934e-03

Joint ci ratio: 5.451645e-02	ci left: 1.375953e-03	ci right 1.453335e-03	k: 5162	n:3650000
Cons ci ratio: 6.169527e-06	ci left: 9.999876e-01	ci right 9.999940e-01	k: 3649968	n:3650000
KS ci ratio: 1.257173e-01	ci left: 2.495578e-04	ci right 2.832982e-04	k: 971	n:3650000
ZNF443   3650000 perm   5538 sec   (659 perm/sec)   p_kst 2.660274e-04   p_cons 9.999912e-01   p_joint 1.414247e-03

Joint ci ratio: 5.444795e-02	ci left: 1.375697e-03	ci right 1.452964e-03	k: 5175	n:3660000
Cons ci ratio: 6.152670e-06	ci left: 9.999877e-01	ci right 9.999940e-01	k: 3659968	n:3660000
KS ci ratio: 1.255882e-01	ci left: 2.494052e-04	ci right 2.830877e-04	k: 973	n:3660000
ZNF443   3660000 perm   5566 sec   (658 perm/sec)   p_kst 2.658470e-04   p_cons 9.999913e-01   p_joint 1.413934e-03

Joint ci ratio: 5.437972e-02	ci left: 1.375442e-03	ci right 1.452596e-03	k: 5188	n:3670000
Cons ci ratio: 6.135905e-06	ci left: 9.999877e-01	ci right 9.999940e-01	k: 3669968	n:3670000
KS ci ratio: 1.253311e-01	ci left: 2.497813e-04	ci right 2.834405e-04	k: 977	n:3670000
ZNF443   3670000 perm   5594 sec   (656 perm/sec)   p_kst 2.662125e-04   p_cons 9.999913e-01   p_joint 1.413624e-03

Joint ci ratio: 5.432219e-02	ci left: 1.374653e-03	ci right 1.451678e-03	k: 5199	n:3680000
Cons ci ratio: 6.211256e-06	ci left: 9.999874e-01	ci right 9.999938e-01	k: 3679967	n:3680000
KS ci ratio: 1.252671e-01	ci left: 2.493658e-04	ci right 2.829505e-04	k: 978	n:3680000
ZNF443   3680000 perm   5622 sec   (655 perm/sec)   p_kst 2.657609e-04   p_cons 9.999910e-01   p_joint 1.412772e-03

Joint ci ratio: 5.423880e-02	ci left: 1.375205e-03	ci right 1.452139e-03	k: 5215	n:3690000
Cons ci ratio: 6.194423e-06	ci left: 9.999874e-01	ci right 9.999938e-01	k: 3689967	n:3690000
KS ci ratio: 1.252032e-01	ci left: 2.489525e-04	ci right 2.824632e-04	k: 979	n:3690000
ZNF443   3690000 perm   5650 sec   (653 perm/sec)   p_kst 2.653117e-04   p_cons 9.999911e-01   p_joint 1.413279e-03

Joint ci ratio: 5.419210e-02	ci left: 1.373888e-03	ci right 1.450680e-03	k: 5224	n:3700000
Cons ci ratio: 6.177681e-06	ci left: 9.999875e-01	ci right 9.999939e-01	k: 3699967	n:3700000
KS ci ratio: 1.251394e-01	ci left: 2.485415e-04	ci right 2.819785e-04	k: 980	n:3700000
ZNF443   3700000 perm   5679 sec   (652 perm/sec)   p_kst 2.648649e-04   p_cons 9.999911e-01   p_joint 1.411892e-03

Joint ci ratio: 5.412999e-02	ci left: 1.373375e-03	ci right 1.450048e-03	k: 5236	n:3710000
Cons ci ratio: 6.161030e-06	ci left: 9.999875e-01	ci right 9.999939e-01	k: 3709967	n:3710000
KS ci ratio: 1.250757e-01	ci left: 2.481326e-04	ci right 2.814965e-04	k: 981	n:3710000
ZNF443   3710000 perm   5707 sec   (650 perm/sec)   p_kst 2.644205e-04   p_cons 9.999911e-01   p_joint 1.411321e-03

Joint ci ratio: 5.405263e-02	ci left: 1.373661e-03	ci right 1.450237e-03	k: 5251	n:3720000
Cons ci ratio: 6.144468e-06	ci left: 9.999875e-01	ci right 9.999939e-01	k: 3719967	n:3720000
KS ci ratio: 1.247584e-01	ci left: 2.487677e-04	ci right 2.821258e-04	k: 986	n:3720000
ZNF443   3720000 perm   5735 sec   (649 perm/sec)   p_kst 2.650538e-04   p_cons 9.999911e-01   p_joint 1.411559e-03

Joint ci ratio: 5.400642e-02	ci left: 1.372359e-03	ci right 1.448794e-03	k: 5260	n:3730000
Cons ci ratio: 6.127995e-06	ci left: 9.999876e-01	ci right 9.999939e-01	k: 3729967	n:3730000
KS ci ratio: 1.246322e-01	ci left: 2.486202e-04	ci right 2.819223e-04	k: 988	n:3730000
ZNF443   3730000 perm   5763 sec   (647 perm/sec)   p_kst 2.648794e-04   p_cons 9.999912e-01   p_joint 1.410188e-03

Joint ci ratio: 5.390912e-02	ci left: 1.373701e-03	ci right 1.450069e-03	k: 5279	n:3740000
Cons ci ratio: 6.200836e-06	ci left: 9.999873e-01	ci right 9.999937e-01	k: 3739966	n:3740000
KS ci ratio: 1.244436e-01	ci left: 2.487326e-04	ci right 2.819957e-04	k: 991	n:3740000
ZNF443   3740000 perm   5791 sec   (646 perm/sec)   p_kst 2.649733e-04   p_cons 9.999909e-01   p_joint 1.411497e-03

Joint ci ratio: 5.381235e-02	ci left: 1.375036e-03	ci right 1.451337e-03	k: 5298	n:3750000
Cons ci ratio: 6.184300e-06	ci left: 9.999873e-01	ci right 9.999937e-01	k: 3749966	n:3750000
KS ci ratio: 1.238828e-01	ci left: 2.503948e-04	ci right 2.837182e-04	k: 1000	n:3750000
ZNF443   3750000 perm   5819 sec   (644 perm/sec)   p_kst 2.666667e-04   p_cons 9.999909e-01   p_joint 1.412800e-03

Joint ci ratio: 5.432824e-02	ci left: 1.345142e-03	ci right 1.420522e-03	k: 5198	n:3760000
Cons ci ratio: 6.167852e-06	ci left: 9.999874e-01	ci right 9.999937e-01	k: 3759966	n:3760000
KS ci ratio: 1.237592e-01	ci left: 2.502443e-04	ci right 2.835120e-04	k: 1002	n:3760000
ZNF443   3760000 perm   5848 sec   (643 perm/sec)   p_kst 2.664894e-04   p_cons 9.999910e-01   p_joint 1.382447e-03

Joint ci ratio: 5.423961e-02	ci left: 1.346022e-03	ci right 1.421325e-03	k: 5215	n:3770000
Cons ci ratio: 6.151492e-06	ci left: 9.999874e-01	ci right 9.999938e-01	k: 3769966	n:3770000
KS ci ratio: 1.235132e-01	ci left: 2.506087e-04	ci right 2.838537e-04	k: 1006	n:3770000
ZNF443   3770000 perm   5876 sec   (642 perm/sec)   p_kst 2.668435e-04   p_cons 9.999910e-01   p_joint 1.383289e-03

Joint ci ratio: 5.488088e-02	ci left: 1.310887e-03	ci right 1.385118e-03	k: 5094	n:3780000
Cons ci ratio: 6.135218e-06	ci left: 9.999874e-01	ci right 9.999938e-01	k: 3779966	n:3780000
KS ci ratio: 1.233296e-01	ci left: 2.507149e-04	ci right 2.839209e-04	k: 1009	n:3780000
ZNF443   3780000 perm   5904 sec   (640 perm/sec)   p_kst 2.669312e-04   p_cons 9.999910e-01   p_joint 1.347619e-03

Joint ci ratio: 5.480563e-02	ci left: 1.311071e-03	ci right 1.385208e-03	k: 5108	n:3790000
Cons ci ratio: 6.119030e-06	ci left: 9.999875e-01	ci right 9.999938e-01	k: 3789966	n:3790000
KS ci ratio: 1.232077e-01	ci left: 2.505648e-04	ci right 2.837158e-04	k: 1011	n:3790000
ZNF443   3790000 perm   5932 sec   (639 perm/sec)   p_kst 2.667546e-04   p_cons 9.999910e-01   p_joint 1.347757e-03

Joint ci ratio: 5.473603e-02	ci left: 1.310996e-03	ci right 1.385031e-03	k: 5121	n:3800000
Cons ci ratio: 6.102927e-06	ci left: 9.999875e-01	ci right 9.999938e-01	k: 3799966	n:3800000
KS ci ratio: 1.230861e-01	ci left: 2.504155e-04	ci right 2.835117e-04	k: 1013	n:3800000
ZNF443   3800000 perm   5961 sec   (637 perm/sec)   p_kst 2.665789e-04   p_cons 9.999911e-01   p_joint 1.347632e-03

Joint ci ratio: 5.542853e-02	ci left: 1.274680e-03	ci right 1.347604e-03	k: 4994	n:3810000
Cons ci ratio: 6.086909e-06	ci left: 9.999875e-01	ci right 9.999938e-01	k: 3809966	n:3810000
KS ci ratio: 1.229649e-01	ci left: 2.502670e-04	ci right 2.833086e-04	k: 1015	n:3810000
ZNF443   3810000 perm   5990 sec   (636 perm/sec)   p_kst 2.664042e-04   p_cons 9.999911e-01   p_joint 1.310761e-03

Joint ci ratio: 5.537316e-02	ci left: 1.273924e-03	ci right 1.346730e-03	k: 5004	n:3820000
Cons ci ratio: 6.070975e-06	ci left: 9.999876e-01	ci right 9.999938e-01	k: 3819966	n:3820000
KS ci ratio: 1.229045e-01	ci left: 2.498656e-04	ci right 2.828368e-04	k: 1016	n:3820000
ZNF443   3820000 perm   6019 sec   (635 perm/sec)   p_kst 2.659686e-04   p_cons 9.999911e-01   p_joint 1.309948e-03

Joint ci ratio: 5.528484e-02	ci left: 1.274718e-03	ci right 1.347449e-03	k: 5020	n:3830000
Cons ci ratio: 6.055124e-06	ci left: 9.999876e-01	ci right 9.999939e-01	k: 3829966	n:3830000
KS ci ratio: 1.229045e-01	ci left: 2.492132e-04	ci right 2.820984e-04	k: 1016	n:3830000
ZNF443   3830000 perm   6048 sec   (633 perm/sec)   p_kst 2.652742e-04   p_cons 9.999911e-01   p_joint 1.310705e-03

Joint ci ratio: 5.523539e-02	ci left: 1.273710e-03	ci right 1.346316e-03	k: 5029	n:3840000
Cons ci ratio: 6.039355e-06	ci left: 9.999876e-01	ci right 9.999939e-01	k: 3839966	n:3840000
KS ci ratio: 1.227839e-01	ci left: 2.490691e-04	ci right 2.819006e-04	k: 1018	n:3840000
ZNF443   3840000 perm   6076 sec   (632 perm/sec)   p_kst 2.651042e-04   p_cons 9.999911e-01   p_joint 1.309635e-03

Joint ci ratio: 5.514225e-02	ci left: 1.274756e-03	ci right 1.347296e-03	k: 5046	n:3850000
Cons ci ratio: 6.023668e-06	ci left: 9.999877e-01	ci right 9.999939e-01	k: 3849966	n:3850000
KS ci ratio: 1.226035e-01	ci left: 2.491774e-04	ci right 2.819715e-04	k: 1021	n:3850000
ZNF443   3850000 perm   6105 sec   (631 perm/sec)   p_kst 2.651948e-04   p_cons 9.999912e-01   p_joint 1.310649e-03

Joint ci ratio: 5.505503e-02	ci left: 1.275542e-03	ci right 1.348008e-03	k: 5062	n:3860000
Cons ci ratio: 6.008063e-06	ci left: 9.999877e-01	ci right 9.999939e-01	k: 3859966	n:3860000
KS ci ratio: 1.224837e-01	ci left: 2.490341e-04	ci right 2.817750e-04	k: 1023	n:3860000
ZNF443   3860000 perm   6134 sec   (629 perm/sec)   p_kst 2.650259e-04   p_cons 9.999912e-01   p_joint 1.311399e-03

Joint ci ratio: 5.500077e-02	ci left: 1.274794e-03	ci right 1.347144e-03	k: 5072	n:3870000
Cons ci ratio: 5.992538e-06	ci left: 9.999877e-01	ci right 9.999939e-01	k: 3869966	n:3870000
KS ci ratio: 1.223643e-01	ci left: 2.488916e-04	ci right 2.815795e-04	k: 1025	n:3870000
ZNF443   3870000 perm   6164 sec   (628 perm/sec)   p_kst 2.648579e-04   p_cons 9.999912e-01   p_joint 1.310594e-03

Joint ci ratio: 5.489802e-02	ci left: 1.276338e-03	ci right 1.348636e-03	k: 5091	n:3880000
Cons ci ratio: 5.977093e-06	ci left: 9.999878e-01	ci right 9.999939e-01	k: 3879966	n:3880000
KS ci ratio: 1.221858e-01	ci left: 2.489997e-04	ci right 2.816506e-04	k: 1028	n:3880000
ZNF443   3880000 perm   6192 sec   (627 perm/sec)   p_kst 2.649485e-04   p_cons 9.999912e-01   p_joint 1.312113e-03

Joint ci ratio: 5.519741e-02	ci left: 1.259112e-03	ci right 1.330836e-03	k: 5036	n:3890000
Cons ci ratio: 5.961728e-06	ci left: 9.999878e-01	ci right 9.999939e-01	k: 3889966	n:3890000
KS ci ratio: 1.220672e-01	ci left: 2.488580e-04	ci right 2.814564e-04	k: 1030	n:3890000
ZNF443   3890000 perm   6222 sec   (625 perm/sec)   p_kst 2.647815e-04   p_cons 9.999913e-01   p_joint 1.294602e-03

Joint ci ratio: 5.506630e-02	ci left: 1.261953e-03	ci right 1.333662e-03	k: 5060	n:3900000
Cons ci ratio: 5.946442e-06	ci left: 9.999878e-01	ci right 9.999940e-01	k: 3899966	n:3900000
KS ci ratio: 1.218311e-01	ci left: 2.492143e-04	ci right 2.817916e-04	k: 1034	n:3900000
ZNF443   3900000 perm   6253 sec   (624 perm/sec)   p_kst 2.651282e-04   p_cons 9.999913e-01   p_joint 1.297436e-03

Joint ci ratio: 5.497402e-02	ci left: 1.263014e-03	ci right 1.334659e-03	k: 5077	n:3910000
Cons ci ratio: 5.931233e-06	ci left: 9.999878e-01	ci right 9.999940e-01	k: 3909966	n:3910000
KS ci ratio: 1.217136e-01	ci left: 2.490728e-04	ci right 2.815980e-04	k: 1036	n:3910000
ZNF443   3910000 perm   6282 sec   (622 perm/sec)   p_kst 2.649616e-04   p_cons 9.999913e-01   p_joint 1.298465e-03

Joint ci ratio: 5.491999e-02	ci left: 1.262308e-03	ci right 1.333841e-03	k: 5087	n:3920000
Cons ci ratio: 6.000024e-06	ci left: 9.999876e-01	ci right 9.999938e-01	k: 3919965	n:3920000
KS ci ratio: 1.216550e-01	ci left: 2.486848e-04	ci right 2.811425e-04	k: 1037	n:3920000
ZNF443   3920000 perm   6311 sec   (621 perm/sec)   p_kst 2.645408e-04   p_cons 9.999911e-01   p_joint 1.297704e-03

Joint ci ratio: 5.514846e-02	ci left: 1.248555e-03	ci right 1.319613e-03	k: 5045	n:3930000
Cons ci ratio: 5.984756e-06	ci left: 9.999876e-01	ci right 9.999938e-01	k: 3929965	n:3930000
KS ci ratio: 1.215379e-01	ci left: 2.485454e-04	ci right 2.809515e-04	k: 1039	n:3930000
ZNF443   3930000 perm   6341 sec   (620 perm/sec)   p_kst 2.643766e-04   p_cons 9.999911e-01   p_joint 1.283715e-03

Joint ci ratio: 5.505033e-02	ci left: 1.249892e-03	ci right 1.320895e-03	k: 5063	n:3940000
Cons ci ratio: 5.969567e-06	ci left: 9.999876e-01	ci right 9.999938e-01	k: 3939965	n:3940000
KS ci ratio: 1.213049e-01	ci left: 2.488990e-04	ci right 2.812845e-04	k: 1043	n:3940000
ZNF443   3940000 perm   6371 sec   (618 perm/sec)   p_kst 2.647208e-04   p_cons 9.999911e-01   p_joint 1.285025e-03

Joint ci ratio: 5.502866e-02	ci left: 1.247726e-03	ci right 1.318577e-03	k: 5067	n:3950000
Cons ci ratio: 6.036589e-06	ci left: 9.999874e-01	ci right 9.999936e-01	k: 3949964	n:3950000
KS ci ratio: 1.212468e-01	ci left: 2.485143e-04	ci right 2.808332e-04	k: 1044	n:3950000
ZNF443   3950000 perm   6401 sec   (617 perm/sec)   p_kst 2.643038e-04   p_cons 9.999909e-01   p_joint 1.282785e-03

Joint ci ratio: 5.494198e-02	ci left: 1.248561e-03	ci right 1.319344e-03	k: 5083	n:3960000
Cons ci ratio: 6.102173e-06	ci left: 9.999871e-01	ci right 9.999934e-01	k: 3959963	n:3960000
KS ci ratio: 1.211889e-01	ci left: 2.481316e-04	ci right 2.803842e-04	k: 1045	n:3960000
ZNF443   3960000 perm   6431 sec   (616 perm/sec)   p_kst 2.638889e-04   p_cons 9.999907e-01   p_joint 1.283586e-03

Joint ci ratio: 5.488804e-02	ci left: 1.247900e-03	ci right 1.318574e-03	k: 5093	n:3970000
Cons ci ratio: 6.086802e-06	ci left: 9.999872e-01	ci right 9.999934e-01	k: 3969963	n:3970000
KS ci ratio: 1.211889e-01	ci left: 2.475066e-04	ci right 2.796780e-04	k: 1045	n:3970000
ZNF443   3970000 perm   6461 sec   (614 perm/sec)   p_kst 2.632242e-04   p_cons 9.999907e-01   p_joint 1.282872e-03

Joint ci ratio: 5.215085e-02	ci left: 1.380614e-03	ci right 1.454788e-03	k: 5641	n:3980000
Cons ci ratio: 6.071508e-06	ci left: 9.999872e-01	ci right 9.999935e-01	k: 3979963	n:3980000
KS ci ratio: 1.209579e-01	ci left: 2.478593e-04	ci right 2.800107e-04	k: 1049	n:3980000
ZNF443   3980000 perm   6491 sec   (613 perm/sec)   p_kst 2.635678e-04   p_cons 9.999907e-01   p_joint 1.417337e-03

Joint ci ratio: 5.208166e-02	ci left: 1.380864e-03	ci right 1.454950e-03	k: 5656	n:3990000
Cons ci ratio: 6.056291e-06	ci left: 9.999872e-01	ci right 9.999935e-01	k: 3989963	n:3990000
KS ci ratio: 1.208428e-01	ci left: 2.477242e-04	ci right 2.798254e-04	k: 1051	n:3990000
ZNF443   3990000 perm   6521 sec   (612 perm/sec)   p_kst 2.634085e-04   p_cons 9.999907e-01   p_joint 1.417544e-03

Joint ci ratio: 5.202193e-02	ci left: 1.380620e-03	ci right 1.454605e-03	k: 5669	n:4000000
Cons ci ratio: 6.041151e-06	ci left: 9.999873e-01	ci right 9.999935e-01	k: 3999963	n:4000000
KS ci ratio: 1.207855e-01	ci left: 2.473474e-04	ci right 2.793833e-04	k: 1052	n:4000000
ZNF443   4000000 perm   6552 sec   (611 perm/sec)   p_kst 2.630000e-04   p_cons 9.999908e-01   p_joint 1.417250e-03

Joint ci ratio: 5.206802e-02	ci left: 1.374715e-03	ci right 1.448452e-03	k: 5659	n:4010000
Cons ci ratio: 6.104862e-06	ci left: 9.999870e-01	ci right 9.999933e-01	k: 4009962	n:4010000
KS ci ratio: 1.205567e-01	ci left: 2.476979e-04	ci right 2.797142e-04	k: 1056	n:4010000
ZNF443   4010000 perm   6582 sec   (609 perm/sec)   p_kst 2.633416e-04   p_cons 9.999905e-01   p_joint 1.411222e-03

Joint ci ratio: 5.236075e-02	ci left: 1.355828e-03	ci right 1.428973e-03	k: 5596	n:4020000
Cons ci ratio: 6.089676e-06	ci left: 9.999870e-01	ci right 9.999933e-01	k: 4019962	n:4020000
KS ci ratio: 1.204997e-01	ci left: 2.473230e-04	ci right 2.792747e-04	k: 1057	n:4020000
ZNF443   4020000 perm   6611 sec   (608 perm/sec)   p_kst 2.629353e-04   p_cons 9.999905e-01   p_joint 1.392040e-03

Joint ci ratio: 5.294180e-02	ci left: 1.322589e-03	ci right 1.394756e-03	k: 5474	n:4030000
Cons ci ratio: 6.074565e-06	ci left: 9.999871e-01	ci right 9.999933e-01	k: 4029962	n:4030000
KS ci ratio: 1.203292e-01	ci left: 2.474313e-04	ci right 2.793485e-04	k: 1060	n:4030000
ZNF443   4030000 perm   6642 sec   (607 perm/sec)   p_kst 2.630273e-04   p_cons 9.999906e-01   p_joint 1.358313e-03

Joint ci ratio: 5.287424e-02	ci left: 1.322735e-03	ci right 1.394815e-03	k: 5488	n:4040000
Cons ci ratio: 6.059529e-06	ci left: 9.999871e-01	ci right 9.999933e-01	k: 4039962	n:4040000
KS ci ratio: 1.200467e-01	ci left: 2.480193e-04	ci right 2.799319e-04	k: 1065	n:4040000
ZNF443   4040000 perm   6673 sec   (605 perm/sec)   p_kst 2.636139e-04   p_cons 9.999906e-01   p_joint 1.358416e-03

Joint ci ratio: 5.353268e-02	ci left: 1.286822e-03	ci right 1.357845e-03	k: 5354	n:4050000
Cons ci ratio: 6.044567e-06	ci left: 9.999871e-01	ci right 9.999934e-01	k: 4049962	n:4050000
KS ci ratio: 1.198781e-01	ci left: 2.481254e-04	ci right 2.800036e-04	k: 1068	n:4050000
ZNF443   4050000 perm   6704 sec   (604 perm/sec)   p_kst 2.637037e-04   p_cons 9.999906e-01   p_joint 1.321975e-03

Joint ci ratio: 5.349277e-02	ci left: 1.285596e-03	ci right 1.356497e-03	k: 5362	n:4060000
Cons ci ratio: 6.029678e-06	ci left: 9.999872e-01	ci right 9.999934e-01	k: 4059962	n:4060000
KS ci ratio: 1.197661e-01	ci left: 2.479921e-04	ci right 2.798213e-04	k: 1070	n:4060000
ZNF443   4060000 perm   6734 sec   (603 perm/sec)   p_kst 2.635468e-04   p_cons 9.999906e-01   p_joint 1.320690e-03

Joint ci ratio: 5.344299e-02	ci left: 1.284862e-03	ci right 1.355654e-03	k: 5372	n:4070000
Cons ci ratio: 6.014863e-06	ci left: 9.999872e-01	ci right 9.999934e-01	k: 4069962	n:4070000
KS ci ratio: 1.196545e-01	ci left: 2.478595e-04	ci right 2.796399e-04	k: 1072	n:4070000
ZNF443   4070000 perm   6765 sec   (602 perm/sec)   p_kst 2.633907e-04   p_cons 9.999907e-01   p_joint 1.319902e-03

Joint ci ratio: 5.340328e-02	ci left: 1.283647e-03	ci right 1.354319e-03	k: 5380	n:4080000
Cons ci ratio: 6.000121e-06	ci left: 9.999872e-01	ci right 9.999934e-01	k: 4079962	n:4080000
KS ci ratio: 1.195988e-01	ci left: 2.474897e-04	ci right 2.792070e-04	k: 1073	n:4080000
ZNF443   4080000 perm   6795 sec   (600 perm/sec)   p_kst 2.629902e-04   p_cons 9.999907e-01   p_joint 1.318627e-03

Joint ci ratio: 5.333889e-02	ci left: 1.283645e-03	ci right 1.354228e-03	k: 5393	n:4090000
Cons ci ratio: 5.985451e-06	ci left: 9.999872e-01	ci right 9.999934e-01	k: 4089962	n:4090000
KS ci ratio: 1.193767e-01	ci left: 2.478334e-04	ci right 2.795315e-04	k: 1077	n:4090000
ZNF443   4090000 perm   6827 sec   (599 perm/sec)   p_kst 2.633252e-04   p_cons 9.999907e-01   p_joint 1.318582e-03

Joint ci ratio: 5.328460e-02	ci left: 1.283161e-03	ci right 1.353644e-03	k: 5404	n:4100000
Cons ci ratio: 6.046918e-06	ci left: 9.999870e-01	ci right 9.999932e-01	k: 4099961	n:4100000
KS ci ratio: 1.192661e-01	ci left: 2.477022e-04	ci right 2.793521e-04	k: 1079	n:4100000
ZNF443   4100000 perm   6858 sec   (598 perm/sec)   p_kst 2.631707e-04   p_cons 9.999905e-01   p_joint 1.318049e-03

Joint ci ratio: 5.318134e-02	ci left: 1.285080e-03	ci right 1.355528e-03	k: 5425	n:4110000
Cons ci ratio: 6.032205e-06	ci left: 9.999870e-01	ci right 9.999933e-01	k: 4109961	n:4110000
KS ci ratio: 1.189361e-01	ci left: 2.485159e-04	ci right 2.801757e-04	k: 1085	n:4110000
ZNF443   4110000 perm   6889 sec   (597 perm/sec)   p_kst 2.639903e-04   p_cons 9.999905e-01   p_joint 1.319951e-03

Joint ci ratio: 5.309820e-02	ci left: 1.286033e-03	ci right 1.356419e-03	k: 5442	n:4120000
Cons ci ratio: 6.017564e-06	ci left: 9.999871e-01	ci right 9.999933e-01	k: 4119961	n:4120000
KS ci ratio: 1.186089e-01	ci left: 2.493257e-04	ci right 2.809952e-04	k: 1091	n:4120000
ZNF443   4120000 perm   6920 sec   (595 perm/sec)   p_kst 2.648058e-04   p_cons 9.999905e-01   p_joint 1.320874e-03

Joint ci ratio: 5.303004e-02	ci left: 1.286264e-03	ci right 1.356569e-03	k: 5456	n:4130000
Cons ci ratio: 6.002993e-06	ci left: 9.999871e-01	ci right 9.999933e-01	k: 4129961	n:4130000
KS ci ratio: 1.183922e-01	ci left: 2.496618e-04	ci right 2.813121e-04	k: 1095	n:4130000
ZNF443   4130000 perm   6951 sec   (594 perm/sec)   p_kst 2.651332e-04   p_cons 9.999906e-01   p_joint 1.321065e-03

Joint ci ratio: 5.296214e-02	ci left: 1.286494e-03	ci right 1.356719e-03	k: 5470	n:4140000
Cons ci ratio: 5.988493e-06	ci left: 9.999871e-01	ci right 9.999933e-01	k: 4139961	n:4140000
KS ci ratio: 1.182843e-01	ci left: 2.495276e-04	ci right 2.811300e-04	k: 1097	n:4140000
ZNF443   4140000 perm   6983 sec   (593 perm/sec)   p_kst 2.649758e-04   p_cons 9.999906e-01   p_joint 1.321256e-03

Joint ci ratio: 5.289933e-02	ci left: 1.286485e-03	ci right 1.356624e-03	k: 5483	n:4150000
Cons ci ratio: 5.974063e-06	ci left: 9.999872e-01	ci right 9.999933e-01	k: 4149961	n:4150000
KS ci ratio: 1.181231e-01	ci left: 2.496278e-04	ci right 2.811968e-04	k: 1100	n:4150000
ZNF443   4150000 perm   7015 sec   (592 perm/sec)   p_kst 2.650602e-04   p_cons 9.999906e-01   p_joint 1.321205e-03

Joint ci ratio: 5.282712e-02	ci left: 1.286950e-03	ci right 1.357016e-03	k: 5498	n:4160000
Cons ci ratio: 5.959702e-06	ci left: 9.999872e-01	ci right 9.999933e-01	k: 4159961	n:4160000
KS ci ratio: 1.177493e-01	ci left: 2.506608e-04	ci right 2.822531e-04	k: 1107	n:4160000
ZNF443   4160000 perm   7047 sec   (590 perm/sec)   p_kst 2.661058e-04   p_cons 9.999906e-01   p_joint 1.321635e-03

Joint ci ratio: 5.662457e-02	ci left: 1.115451e-03	ci right 1.180688e-03	k: 4786	n:4170000
Cons ci ratio: 5.945410e-06	ci left: 9.999872e-01	ci right 9.999933e-01	k: 4169961	n:4170000
KS ci ratio: 1.248235e-01	ci left: 2.216898e-04	ci right 2.514335e-04	k: 985	n:4170000
ZNF443   4170000 perm   7078 sec   (589 perm/sec)   p_kst 2.362110e-04   p_cons 9.999906e-01   p_joint 1.147722e-03

Joint ci ratio: 5.653603e-02	ci left: 1.116321e-03	ci right 1.181503e-03	k: 4801	n:4180000
Cons ci ratio: 5.931187e-06	ci left: 9.999872e-01	ci right 9.999934e-01	k: 4179961	n:4180000
KS ci ratio: 1.245081e-01	ci left: 2.223183e-04	ci right 2.520654e-04	k: 990	n:4180000
ZNF443   4180000 perm   7110 sec   (588 perm/sec)   p_kst 2.368421e-04   p_cons 9.999907e-01   p_joint 1.148565e-03

Joint ci ratio: 5.644205e-02	ci left: 1.117421e-03	ci right 1.182556e-03	k: 4817	n:4190000
Cons ci ratio: 5.990538e-06	ci left: 9.999870e-01	ci right 9.999932e-01	k: 4189960	n:4190000
KS ci ratio: 1.243201e-01	ci left: 2.224814e-04	ci right 2.522021e-04	k: 993	n:4190000
ZNF443   4190000 perm   7141 sec   (587 perm/sec)   p_kst 2.369928e-04   p_cons 9.999905e-01   p_joint 1.149642e-03

Joint ci ratio: 5.636021e-02	ci left: 1.118047e-03	ci right 1.183120e-03	k: 4831	n:4200000
Cons ci ratio: 5.976275e-06	ci left: 9.999870e-01	ci right 9.999932e-01	k: 4199960	n:4200000
KS ci ratio: 1.241329e-01	ci left: 2.226438e-04	ci right 2.523381e-04	k: 996	n:4200000
ZNF443   4200000 perm   7173 sec   (586 perm/sec)   p_kst 2.371429e-04   p_cons 9.999905e-01   p_joint 1.150238e-03

Joint ci ratio: 5.630199e-02	ci left: 1.117733e-03	ci right 1.182719e-03	k: 4841	n:4210000
Cons ci ratio: 5.962079e-06	ci left: 9.999871e-01	ci right 9.999932e-01	k: 4209960	n:4210000
KS ci ratio: 1.240086e-01	ci left: 2.225752e-04	ci right 2.522285e-04	k: 998	n:4210000
ZNF443   4210000 perm   7205 sec   (584 perm/sec)   p_kst 2.370546e-04   p_cons 9.999905e-01   p_joint 1.149881e-03

Joint ci ratio: 5.626137e-02	ci left: 1.116720e-03	ci right 1.181598e-03	k: 4848	n:4220000
Cons ci ratio: 5.947951e-06	ci left: 9.999871e-01	ci right 9.999932e-01	k: 4219960	n:4220000
KS ci ratio: 1.239466e-01	ci left: 2.222774e-04	ci right 2.518751e-04	k: 999	n:4220000
ZNF443   4220000 perm   7237 sec   (583 perm/sec)   p_kst 2.367299e-04   p_cons 9.999905e-01   p_joint 1.148815e-03

Joint ci ratio: 5.626725e-02	ci left: 1.113847e-03	ci right 1.178565e-03	k: 4847	n:4230000
Cons ci ratio: 5.933890e-06	ci left: 9.999871e-01	ci right 9.999932e-01	k: 4229960	n:4230000
KS ci ratio: 1.237611e-01	ci left: 2.224392e-04	ci right 2.520109e-04	k: 1002	n:4230000
ZNF443   4230000 perm   7268 sec   (582 perm/sec)   p_kst 2.368794e-04   p_cons 9.999905e-01   p_joint 1.145863e-03

Joint ci ratio: 5.680358e-02	ci left: 1.090060e-03	ci right 1.154020e-03	k: 4756	n:4240000
Cons ci ratio: 5.919895e-06	ci left: 9.999872e-01	ci right 9.999933e-01	k: 4239960	n:4240000
KS ci ratio: 1.236994e-01	ci left: 2.221431e-04	ci right 2.516597e-04	k: 1003	n:4240000
ZNF443   4240000 perm   7300 sec   (581 perm/sec)   p_kst 2.365566e-04   p_cons 9.999906e-01   p_joint 1.121698e-03

Joint ci ratio: 5.672611e-02	ci left: 1.090511e-03	ci right 1.154407e-03	k: 4769	n:4250000
Cons ci ratio: 5.905965e-06	ci left: 9.999872e-01	ci right 9.999933e-01	k: 4249960	n:4250000
KS ci ratio: 1.234537e-01	ci left: 2.225325e-04	ci right 2.520378e-04	k: 1007	n:4250000
ZNF443   4250000 perm   7332 sec   (580 perm/sec)   p_kst 2.369412e-04   p_cons 9.999906e-01   p_joint 1.122118e-03

Joint ci ratio: 5.667862e-02	ci left: 1.089802e-03	ci right 1.153602e-03	k: 4777	n:4260000
Cons ci ratio: 5.892102e-06	ci left: 9.999872e-01	ci right 9.999933e-01	k: 4259960	n:4260000
KS ci ratio: 1.232095e-01	ci left: 2.229201e-04	ci right 2.524140e-04	k: 1011	n:4260000
ZNF443   4260000 perm   7365 sec   (578 perm/sec)   p_kst 2.373239e-04   p_cons 9.999906e-01   p_joint 1.121362e-03

Joint ci ratio: 5.660166e-02	ci left: 1.090251e-03	ci right 1.153988e-03	k: 4790	n:4270000
Cons ci ratio: 5.878303e-06	ci left: 9.999872e-01	ci right 9.999933e-01	k: 4269960	n:4270000
KS ci ratio: 1.230273e-01	ci left: 2.230790e-04	ci right 2.525471e-04	k: 1014	n:4270000
ZNF443   4270000 perm   7398 sec   (577 perm/sec)   p_kst 2.374707e-04   p_cons 9.999906e-01   p_joint 1.121780e-03

Joint ci ratio: 5.656038e-02	ci left: 1.089317e-03	ci right 1.152950e-03	k: 4797	n:4280000
Cons ci ratio: 5.864568e-06	ci left: 9.999873e-01	ci right 9.999933e-01	k: 4279960	n:4280000
KS ci ratio: 1.229667e-01	ci left: 2.227843e-04	ci right 2.521979e-04	k: 1015	n:4280000
ZNF443   4280000 perm   7430 sec   (576 perm/sec)   p_kst 2.371495e-04   p_cons 9.999907e-01   p_joint 1.120794e-03

Joint ci ratio: 5.650154e-02	ci left: 1.089075e-03	ci right 1.152627e-03	k: 4807	n:4290000
Cons ci ratio: 5.850898e-06	ci left: 9.999873e-01	ci right 9.999933e-01	k: 4289960	n:4290000
KS ci ratio: 1.227856e-01	ci left: 2.229427e-04	ci right 2.523308e-04	k: 1018	n:4290000
ZNF443   4290000 perm   7462 sec   (575 perm/sec)   p_kst 2.372960e-04   p_cons 9.999907e-01   p_joint 1.120513e-03

Joint ci ratio: 5.642530e-02	ci left: 1.089523e-03	ci right 1.153012e-03	k: 4820	n:4300000
Cons ci ratio: 5.837291e-06	ci left: 9.999873e-01	ci right 9.999934e-01	k: 4299960	n:4300000
KS ci ratio: 1.226653e-01	ci left: 2.228751e-04	ci right 2.522234e-04	k: 1020	n:4300000
ZNF443   4300000 perm   7495 sec   (574 perm/sec)   p_kst 2.372093e-04   p_cons 9.999907e-01   p_joint 1.120930e-03

Joint ci ratio: 5.647817e-02	ci left: 1.084937e-03	ci right 1.148219e-03	k: 4811	n:4310000
Cons ci ratio: 5.823748e-06	ci left: 9.999874e-01	ci right 9.999934e-01	k: 4309960	n:4310000
KS ci ratio: 1.224854e-01	ci left: 2.230327e-04	ci right 2.523555e-04	k: 1023	n:4310000
ZNF443   4310000 perm   7527 sec   (573 perm/sec)   p_kst 2.373550e-04   p_cons 9.999907e-01   p_joint 1.116241e-03

Joint ci ratio: 5.670283e-02	ci left: 1.073753e-03	ci right 1.136641e-03	k: 4773	n:4320000
Cons ci ratio: 5.810267e-06	ci left: 9.999874e-01	ci right 9.999934e-01	k: 4319960	n:4320000
KS ci ratio: 1.224257e-01	ci left: 2.227408e-04	ci right 2.520100e-04	k: 1024	n:4320000
ZNF443   4320000 perm   7559 sec   (572 perm/sec)   p_kst 2.370370e-04   p_cons 9.999907e-01   p_joint 1.104861e-03

Joint ci ratio: 5.664947e-02	ci left: 1.073322e-03	ci right 1.136124e-03	k: 4782	n:4330000
Cons ci ratio: 5.796848e-06	ci left: 9.999874e-01	ci right 9.999934e-01	k: 4329960	n:4330000
KS ci ratio: 1.224257e-01	ci left: 2.222264e-04	ci right 2.514280e-04	k: 1024	n:4330000
ZNF443   4330000 perm   7592 sec   (570 perm/sec)   p_kst 2.364896e-04   p_cons 9.999908e-01   p_joint 1.104388e-03

Joint ci ratio: 5.661400e-02	ci left: 1.072212e-03	ci right 1.134908e-03	k: 4788	n:4340000
Cons ci ratio: 5.783491e-06	ci left: 9.999874e-01	ci right 9.999934e-01	k: 4339960	n:4340000
KS ci ratio: 1.224258e-01	ci left: 2.217144e-04	ci right 2.508486e-04	k: 1024	n:4340000
ZNF443   4340000 perm   7625 sec   (569 perm/sec)   p_kst 2.359447e-04   p_cons 9.999908e-01   p_joint 1.103226e-03

Joint ci ratio: 5.657270e-02	ci left: 1.071334e-03	ci right 1.133931e-03	k: 4795	n:4350000
Cons ci ratio: 5.770196e-06	ci left: 9.999875e-01	ci right 9.999934e-01	k: 4349960	n:4350000
KS ci ratio: 1.223661e-01	ci left: 2.214275e-04	ci right 2.505089e-04	k: 1025	n:4350000
ZNF443   4350000 perm   7657 sec   (568 perm/sec)   p_kst 2.356322e-04   p_cons 9.999908e-01   p_joint 1.102299e-03

Joint ci ratio: 5.651382e-02	ci left: 1.071138e-03	ci right 1.133656e-03	k: 4805	n:4360000
Cons ci ratio: 5.756961e-06	ci left: 9.999875e-01	ci right 9.999934e-01	k: 4359960	n:4360000
KS ci ratio: 1.222470e-01	ci left: 2.213643e-04	ci right 2.504071e-04	k: 1027	n:4360000
ZNF443   4360000 perm   7690 sec   (567 perm/sec)   p_kst 2.355505e-04   p_cons 9.999908e-01   p_joint 1.102064e-03

Joint ci ratio: 5.647273e-02	ci left: 1.070266e-03	ci right 1.132687e-03	k: 4812	n:4370000
Cons ci ratio: 5.743787e-06	ci left: 9.999875e-01	ci right 9.999935e-01	k: 4369960	n:4370000
KS ci ratio: 1.220690e-01	ci left: 2.215233e-04	ci right 2.505415e-04	k: 1030	n:4370000
ZNF443   4370000 perm   7723 sec   (566 perm/sec)   p_kst 2.356979e-04   p_cons 9.999908e-01   p_joint 1.101144e-03

Joint ci ratio: 5.637907e-02	ci left: 1.071424e-03	ci right 1.133805e-03	k: 4828	n:4380000
Cons ci ratio: 5.730674e-06	ci left: 9.999876e-01	ci right 9.999935e-01	k: 4379960	n:4380000
KS ci ratio: 1.217741e-01	ci left: 2.221243e-04	ci right 2.511459e-04	k: 1035	n:4380000
ZNF443   4380000 perm   7757 sec   (565 perm/sec)   p_kst 2.363014e-04   p_cons 9.999909e-01   p_joint 1.102283e-03

Joint ci ratio: 5.650226e-02	ci left: 1.064267e-03	ci right 1.126371e-03	k: 4807	n:4390000
Cons ci ratio: 5.717620e-06	ci left: 9.999876e-01	ci right 9.999935e-01	k: 4389960	n:4390000
KS ci ratio: 1.216567e-01	ci left: 2.220600e-04	ci right 2.510432e-04	k: 1037	n:4390000
ZNF443   4390000 perm   7790 sec   (564 perm/sec)   p_kst 2.362187e-04   p_cons 9.999909e-01   p_joint 1.094989e-03

Joint ci ratio: 5.652588e-02	ci left: 1.060952e-03	ci right 1.122890e-03	k: 4803	n:4400000
Cons ci ratio: 5.704625e-06	ci left: 9.999876e-01	ci right 9.999935e-01	k: 4399960	n:4400000
KS ci ratio: 1.215397e-01	ci left: 2.219961e-04	ci right 2.509410e-04	k: 1039	n:4400000
ZNF443   4400000 perm   7823 sec   (562 perm/sec)   p_kst 2.361364e-04   p_cons 9.999909e-01   p_joint 1.091591e-03

Joint ci ratio: 5.644954e-02	ci left: 1.061452e-03	ci right 1.123333e-03	k: 4816	n:4410000
Cons ci ratio: 5.691689e-06	ci left: 9.999876e-01	ci right 9.999935e-01	k: 4409960	n:4410000
KS ci ratio: 1.212485e-01	ci left: 2.225920e-04	ci right 2.515402e-04	k: 1044	n:4410000
ZNF443   4410000 perm   7856 sec   (561 perm/sec)   p_kst 2.367347e-04   p_cons 9.999909e-01   p_joint 1.092063e-03

Joint ci ratio: 5.637935e-02	ci left: 1.061727e-03	ci right 1.123545e-03	k: 4828	n:4420000
Cons ci ratio: 5.678812e-06	ci left: 9.999877e-01	ci right 9.999935e-01	k: 4419960	n:4420000
KS ci ratio: 1.210748e-01	ci left: 2.227466e-04	ci right 2.516704e-04	k: 1047	n:4420000
ZNF443   4420000 perm   7890 sec   (560 perm/sec)   p_kst 2.368778e-04   p_cons 9.999910e-01   p_joint 1.092308e-03

Joint ci ratio: 5.631524e-02	ci left: 1.061779e-03	ci right 1.123526e-03	k: 4839	n:4430000
Cons ci ratio: 5.665993e-06	ci left: 9.999877e-01	ci right 9.999935e-01	k: 4429960	n:4430000
KS ci ratio: 1.210749e-01	ci left: 2.222438e-04	ci right 2.511023e-04	k: 1047	n:4430000
ZNF443   4430000 perm   7923 sec   (559 perm/sec)   p_kst 2.363431e-04   p_cons 9.999910e-01   p_joint 1.092325e-03

Joint ci ratio: 5.625716e-02	ci left: 1.061608e-03	ci right 1.123280e-03	k: 4849	n:4440000
Cons ci ratio: 5.653232e-06	ci left: 9.999877e-01	ci right 9.999936e-01	k: 4439960	n:4440000
KS ci ratio: 1.209595e-01	ci left: 2.221800e-04	ci right 2.510008e-04	k: 1049	n:4440000
ZNF443   4440000 perm   7957 sec   (558 perm/sec)   p_kst 2.362613e-04   p_cons 9.999910e-01   p_joint 1.092117e-03

Joint ci ratio: 5.618769e-02	ci left: 1.061881e-03	ci right 1.123490e-03	k: 4861	n:4450000
Cons ci ratio: 5.640528e-06	ci left: 9.999878e-01	ci right 9.999936e-01	k: 4449960	n:4450000
KS ci ratio: 1.208445e-01	ci left: 2.221166e-04	ci right 2.508998e-04	k: 1051	n:4450000
ZNF443   4450000 perm   7990 sec   (557 perm/sec)   p_kst 2.361798e-04   p_cons 9.999910e-01   p_joint 1.092360e-03

Joint ci ratio: 5.613577e-02	ci left: 1.061490e-03	ci right 1.123017e-03	k: 4870	n:4460000
Cons ci ratio: 5.627881e-06	ci left: 9.999878e-01	ci right 9.999936e-01	k: 4459960	n:4460000
KS ci ratio: 1.206154e-01	ci left: 2.224884e-04	ci right 2.512612e-04	k: 1055	n:4460000
ZNF443   4460000 perm   8024 sec   (556 perm/sec)   p_kst 2.365471e-04   p_cons 9.999910e-01   p_joint 1.091928e-03

Joint ci ratio: 5.650282e-02	ci left: 1.045219e-03	ci right 1.106213e-03	k: 4807	n:4470000
Cons ci ratio: 5.615290e-06	ci left: 9.999878e-01	ci right 9.999936e-01	k: 4469960	n:4470000
KS ci ratio: 1.206154e-01	ci left: 2.219906e-04	ci right 2.506991e-04	k: 1055	n:4470000
ZNF443   4470000 perm   8057 sec   (555 perm/sec)   p_kst 2.360179e-04   p_cons 9.999911e-01   p_joint 1.075391e-03

Joint ci ratio: 5.647350e-02	ci left: 1.043987e-03	ci right 1.104876e-03	k: 4812	n:4480000
Cons ci ratio: 5.602756e-06	ci left: 9.999878e-01	ci right 9.999936e-01	k: 4479960	n:4480000
KS ci ratio: 1.206154e-01	ci left: 2.214951e-04	ci right 2.501395e-04	k: 1055	n:4480000
ZNF443   4480000 perm   8090 sec   (554 perm/sec)   p_kst 2.354911e-04   p_cons 9.999911e-01   p_joint 1.074107e-03

Joint ci ratio: 5.707624e-02	ci left: 1.019486e-03	ci right 1.079601e-03	k: 4711	n:4490000
Cons ci ratio: 5.590278e-06	ci left: 9.999879e-01	ci right 9.999936e-01	k: 4489960	n:4490000
KS ci ratio: 1.203876e-01	ci left: 2.218658e-04	ci right 2.505001e-04	k: 1059	n:4490000
ZNF443   4490000 perm   8124 sec   (553 perm/sec)   p_kst 2.358575e-04   p_cons 9.999911e-01   p_joint 1.049220e-03

Joint ci ratio: 5.702182e-02	ci left: 1.019192e-03	ci right 1.079231e-03	k: 4720	n:4500000
Cons ci ratio: 5.577855e-06	ci left: 9.999879e-01	ci right 9.999936e-01	k: 4499960	n:4500000
KS ci ratio: 1.202176e-01	ci left: 2.220194e-04	ci right 2.506301e-04	k: 1062	n:4500000
ZNF443   4500000 perm   8158 sec   (552 perm/sec)   p_kst 2.360000e-04   p_cons 9.999911e-01   p_joint 1.048889e-03

Joint ci ratio: 5.791920e-02	ci left: 9.852427e-04	ci right 1.044226e-03	k: 4575	n:4510000
Cons ci ratio: 5.565487e-06	ci left: 9.999879e-01	ci right 9.999937e-01	k: 4509960	n:4510000
KS ci ratio: 1.200483e-01	ci left: 2.221723e-04	ci right 2.507596e-04	k: 1065	n:4510000
ZNF443   4510000 perm   8192 sec   (551 perm/sec)   p_kst 2.361419e-04   p_cons 9.999911e-01   p_joint 1.014412e-03

Joint ci ratio: 5.787497e-02	ci left: 9.845892e-04	ci right 1.043487e-03	k: 4582	n:4520000
Cons ci ratio: 5.553174e-06	ci left: 9.999879e-01	ci right 9.999937e-01	k: 4519960	n:4520000
KS ci ratio: 1.199921e-01	ci left: 2.218954e-04	ci right 2.504327e-04	k: 1066	n:4520000
ZNF443   4520000 perm   8226 sec   (549 perm/sec)   p_kst 2.358407e-04   p_cons 9.999912e-01   p_joint 1.013717e-03

Joint ci ratio: 5.781824e-02	ci left: 9.843737e-04	ci right 1.043199e-03	k: 4591	n:4530000
Cons ci ratio: 5.540915e-06	ci left: 9.999880e-01	ci right 9.999937e-01	k: 4529960	n:4530000
KS ci ratio: 1.199921e-01	ci left: 2.214055e-04	ci right 2.498799e-04	k: 1066	n:4530000
ZNF443   4530000 perm   8260 sec   (548 perm/sec)   p_kst 2.353201e-04   p_cons 9.999912e-01   p_joint 1.013466e-03

Joint ci ratio: 5.776795e-02	ci left: 9.839421e-04	ci right 1.042688e-03	k: 4599	n:4540000
Cons ci ratio: 5.528711e-06	ci left: 9.999880e-01	ci right 9.999937e-01	k: 4539960	n:4540000
KS ci ratio: 1.198798e-01	ci left: 2.213452e-04	ci right 2.497832e-04	k: 1068	n:4540000
ZNF443   4540000 perm   8295 sec   (547 perm/sec)   p_kst 2.352423e-04   p_cons 9.999912e-01   p_joint 1.012996e-03

Joint ci ratio: 5.769274e-02	ci left: 9.843789e-04	ci right 1.043072e-03	k: 4611	n:4550000
Cons ci ratio: 5.516560e-06	ci left: 9.999880e-01	ci right 9.999937e-01	k: 4549960	n:4550000
KS ci ratio: 1.196561e-01	ci left: 2.217115e-04	ci right 2.501397e-04	k: 1072	n:4550000
ZNF443   4550000 perm   8329 sec   (546 perm/sec)   p_kst 2.356044e-04   p_cons 9.999912e-01   p_joint 1.013407e-03

Joint ci ratio: 5.767403e-02	ci left: 9.828686e-04	ci right 1.041452e-03	k: 4614	n:4560000
Cons ci ratio: 5.504462e-06	ci left: 9.999881e-01	ci right 9.999937e-01	k: 4559960	n:4560000
KS ci ratio: 1.195448e-01	ci left: 2.216507e-04	ci right 2.500428e-04	k: 1074	n:4560000
ZNF443   4560000 perm   8363 sec   (545 perm/sec)   p_kst 2.355263e-04   p_cons 9.999912e-01   p_joint 1.011842e-03

Joint ci ratio: 5.760541e-02	ci left: 9.830902e-04	ci right 1.041615e-03	k: 4625	n:4570000
Cons ci ratio: 5.492417e-06	ci left: 9.999881e-01	ci right 9.999937e-01	k: 4569960	n:4570000
KS ci ratio: 1.193230e-01	ci left: 2.220149e-04	ci right 2.503971e-04	k: 1078	n:4570000
ZNF443   4570000 perm   8398 sec   (544 perm/sec)   p_kst 2.358862e-04   p_cons 9.999912e-01   p_joint 1.012035e-03

Joint ci ratio: 5.751842e-02	ci left: 9.839565e-04	ci right 1.042441e-03	k: 4639	n:4580000
Cons ci ratio: 5.480425e-06	ci left: 9.999881e-01	ci right 9.999938e-01	k: 4579960	n:4580000
KS ci ratio: 1.191574e-01	ci left: 2.221656e-04	ci right 2.505249e-04	k: 1081	n:4580000
ZNF443   4580000 perm   8433 sec   (543 perm/sec)   p_kst 2.360262e-04   p_cons 9.999913e-01   p_joint 1.012882e-03

Joint ci ratio: 5.744417e-02	ci left: 9.843896e-04	ci right 1.042822e-03	k: 4651	n:4590000
Cons ci ratio: 5.468485e-06	ci left: 9.999881e-01	ci right 9.999938e-01	k: 4589960	n:4590000
KS ci ratio: 1.189926e-01	ci left: 2.223157e-04	ci right 2.506522e-04	k: 1084	n:4590000
ZNF443   4590000 perm   8467 sec   (542 perm/sec)   p_kst 2.361656e-04   p_cons 9.999913e-01   p_joint 1.013290e-03

Joint ci ratio: 5.772439e-02	ci left: 9.726077e-04	ci right 1.030632e-03	k: 4606	n:4600000
Cons ci ratio: 5.456597e-06	ci left: 9.999882e-01	ci right 9.999938e-01	k: 4599960	n:4600000
KS ci ratio: 1.188830e-01	ci left: 2.222543e-04	ci right 2.505550e-04	k: 1086	n:4600000
ZNF443   4600000 perm   8502 sec   (541 perm/sec)   p_kst 2.360870e-04   p_cons 9.999913e-01   p_joint 1.001304e-03

Joint ci ratio: 5.940683e-02	ci left: 9.155649e-04	ci right 9.718328e-04	k: 4349	n:4610000
Cons ci ratio: 5.510760e-06	ci left: 9.999879e-01	ci right 9.999936e-01	k: 4609959	n:4610000
KS ci ratio: 1.188831e-01	ci left: 2.217721e-04	ci right 2.500115e-04	k: 1086	n:4610000
ZNF443   4610000 perm   8538 sec   (540 perm/sec)   p_kst 2.355748e-04   p_cons 9.999911e-01   p_joint 9.433839e-04

Joint ci ratio: 5.933866e-02	ci left: 9.157156e-04	ci right 9.719259e-04	k: 4359	n:4620000
Cons ci ratio: 5.498832e-06	ci left: 9.999880e-01	ci right 9.999936e-01	k: 4619959	n:4620000
KS ci ratio: 1.186649e-01	ci left: 2.221322e-04	ci right 2.503618e-04	k: 1090	n:4620000
ZNF443   4620000 perm   8573 sec   (539 perm/sec)   p_kst 2.359307e-04   p_cons 9.999911e-01   p_joint 9.435065e-04

Joint ci ratio: 5.925716e-02	ci left: 9.162912e-04	ci right 9.724569e-04	k: 4371	n:4630000
Cons ci ratio: 5.486956e-06	ci left: 9.999880e-01	ci right 9.999936e-01	k: 4629959	n:4630000
KS ci ratio: 1.183939e-01	ci left: 2.227003e-04	ci right 2.509330e-04	k: 1095	n:4630000
ZNF443   4630000 perm   8607 sec   (538 perm/sec)   p_kst 2.365011e-04   p_cons 9.999911e-01   p_joint 9.440605e-04

Joint ci ratio: 5.920979e-02	ci left: 9.158027e-04	ci right 9.718921e-04	k: 4378	n:4640000
Cons ci ratio: 5.475130e-06	ci left: 9.999880e-01	ci right 9.999937e-01	k: 4639959	n:4640000
KS ci ratio: 1.181784e-01	ci left: 2.230569e-04	ci right 2.512798e-04	k: 1099	n:4640000
ZNF443   4640000 perm   8643 sec   (537 perm/sec)   p_kst 2.368534e-04   p_cons 9.999912e-01   p_joint 9.435345e-04

Joint ci ratio: 5.915579e-02	ci left: 9.155282e-04	ci right 9.715479e-04	k: 4386	n:4650000
Cons ci ratio: 5.463356e-06	ci left: 9.999880e-01	ci right 9.999937e-01	k: 4649959	n:4650000
KS ci ratio: 1.181785e-01	ci left: 2.225772e-04	ci right 2.507394e-04	k: 1099	n:4650000
ZNF443   4650000 perm   8678 sec   (536 perm/sec)   p_kst 2.363441e-04   p_cons 9.999912e-01   p_joint 9.432258e-04

Joint ci ratio: 5.908848e-02	ci left: 9.156777e-04	ci right 9.716406e-04	k: 4396	n:4660000
Cons ci ratio: 5.516151e-06	ci left: 9.999878e-01	ci right 9.999935e-01	k: 4659958	n:4660000
KS ci ratio: 1.180712e-01	ci left: 2.225161e-04	ci right 2.506432e-04	k: 1101	n:4660000
ZNF443   4660000 perm   8714 sec   (535 perm/sec)   p_kst 2.362661e-04   p_cons 9.999910e-01   p_joint 9.433476e-04

Joint ci ratio: 5.911546e-02	ci left: 9.128730e-04	ci right 9.686909e-04	k: 4392	n:4670000
Cons ci ratio: 5.567976e-06	ci left: 9.999876e-01	ci right 9.999933e-01	k: 4669957	n:4670000
KS ci ratio: 1.178042e-01	ci left: 2.230787e-04	ci right 2.512087e-04	k: 1106	n:4670000
ZNF443   4670000 perm   8748 sec   (534 perm/sec)   p_kst 2.368308e-04   p_cons 9.999908e-01   p_joint 9.404711e-04

Joint ci ratio: 5.904828e-02	ci left: 9.130276e-04	ci right 9.687894e-04	k: 4402	n:4680000
Cons ci ratio: 5.556078e-06	ci left: 9.999876e-01	ci right 9.999934e-01	k: 4679957	n:4680000
KS ci ratio: 1.175919e-01	ci left: 2.234316e-04	ci right 2.515518e-04	k: 1110	n:4680000
ZNF443   4680000 perm   8783 sec   (533 perm/sec)   p_kst 2.371795e-04   p_cons 9.999908e-01   p_joint 9.405983e-04

Joint ci ratio: 5.900811e-02	ci left: 9.123413e-04	ci right 9.680219e-04	k: 4408	n:4690000
Cons ci ratio: 5.544232e-06	ci left: 9.999877e-01	ci right 9.999934e-01	k: 4689957	n:4690000
KS ci ratio: 1.175390e-01	ci left: 2.231621e-04	ci right 2.512349e-04	k: 1111	n:4690000
ZNF443   4690000 perm   8818 sec   (532 perm/sec)   p_kst 2.368870e-04   p_cons 9.999908e-01   p_joint 9.398721e-04

Joint ci ratio: 5.890796e-02	ci left: 9.135446e-04	ci right 9.692008e-04	k: 4423	n:4700000
Cons ci ratio: 5.594951e-06	ci left: 9.999874e-01	ci right 9.999932e-01	k: 4699956	n:4700000
KS ci ratio: 1.173282e-01	ci left: 2.235134e-04	ci right 2.515764e-04	k: 1115	n:4700000
ZNF443   4700000 perm   8853 sec   (531 perm/sec)   p_kst 2.372340e-04   p_cons 9.999906e-01   p_joint 9.410638e-04

Joint ci ratio: 5.906189e-02	ci left: 9.067937e-04	ci right 9.621879e-04	k: 4400	n:4710000
Cons ci ratio: 5.583072e-06	ci left: 9.999875e-01	ci right 9.999932e-01	k: 4709956	n:4710000
KS ci ratio: 1.171185e-01	ci left: 2.238632e-04	ci right 2.519164e-04	k: 1119	n:4710000
ZNF443   4710000 perm   8889 sec   (530 perm/sec)   p_kst 2.375796e-04   p_cons 9.999907e-01   p_joint 9.341826e-04

Joint ci ratio: 5.900829e-02	ci left: 9.065425e-04	ci right 9.618693e-04	k: 4408	n:4720000
Cons ci ratio: 5.571244e-06	ci left: 9.999875e-01	ci right 9.999932e-01	k: 4719956	n:4720000
KS ci ratio: 1.170662e-01	ci left: 2.235946e-04	ci right 2.516008e-04	k: 1120	n:4720000
ZNF443   4720000 perm   8924 sec   (529 perm/sec)   p_kst 2.372881e-04   p_cons 9.999907e-01   p_joint 9.338983e-04

Joint ci ratio: 5.896152e-02	ci left: 9.060840e-04	ci right 9.613375e-04	k: 4415	n:4730000
Cons ci ratio: 5.559465e-06	ci left: 9.999875e-01	ci right 9.999932e-01	k: 4729956	n:4730000
KS ci ratio: 1.170141e-01	ci left: 2.233271e-04	ci right 2.512865e-04	k: 1121	n:4730000
ZNF443   4730000 perm   8960 sec   (528 perm/sec)   p_kst 2.369979e-04   p_cons 9.999907e-01   p_joint 9.334038e-04

Joint ci ratio: 5.888821e-02	ci left: 9.064589e-04	ci right 9.616642e-04	k: 4426	n:4740000
Cons ci ratio: 5.547736e-06	ci left: 9.999875e-01	ci right 9.999933e-01	k: 4739956	n:4740000
KS ci ratio: 1.169099e-01	ci left: 2.232655e-04	ci right 2.511906e-04	k: 1123	n:4740000
ZNF443   4740000 perm   8996 sec   (527 perm/sec)   p_kst 2.369198e-04   p_cons 9.999907e-01   p_joint 9.337553e-04

Joint ci ratio: 5.880854e-02	ci left: 9.070397e-04	ci right 9.622032e-04	k: 4438	n:4750000
Cons ci ratio: 5.536057e-06	ci left: 9.999876e-01	ci right 9.999933e-01	k: 4749956	n:4750000
KS ci ratio: 1.167024e-01	ci left: 2.236130e-04	ci right 2.515285e-04	k: 1127	n:4750000
ZNF443   4750000 perm   9031 sec   (526 perm/sec)   p_kst 2.372632e-04   p_cons 9.999907e-01   p_joint 9.343158e-04

Joint ci ratio: 5.523140e-02	ci left: 1.027941e-03	ci right 1.086534e-03	k: 5031	n:4760000
Cons ci ratio: 5.524426e-06	ci left: 9.999876e-01	ci right 9.999933e-01	k: 4759956	n:4760000
KS ci ratio: 1.165991e-01	ci left: 2.235511e-04	ci right 2.514325e-04	k: 1129	n:4760000
ZNF443   4760000 perm   9067 sec   (525 perm/sec)   p_kst 2.371849e-04   p_cons 9.999908e-01   p_joint 1.056933e-03

Joint ci ratio: 5.519304e-02	ci left: 1.027234e-03	ci right 1.085744e-03	k: 5038	n:4770000
Cons ci ratio: 5.512845e-06	ci left: 9.999876e-01	ci right 9.999933e-01	k: 4769956	n:4770000
KS ci ratio: 1.164961e-01	ci left: 2.234895e-04	ci right 2.513369e-04	k: 1131	n:4770000
ZNF443   4770000 perm   9103 sec   (524 perm/sec)   p_kst 2.371069e-04   p_cons 9.999908e-01   p_joint 1.056184e-03

Joint ci ratio: 5.514930e-02	ci left: 1.026735e-03	ci right 1.085169e-03	k: 5046	n:4780000
Cons ci ratio: 5.501312e-06	ci left: 9.999876e-01	ci right 9.999933e-01	k: 4779956	n:4780000
KS ci ratio: 1.163420e-01	ci left: 2.236313e-04	ci right 2.514569e-04	k: 1134	n:4780000
ZNF443   4780000 perm   9139 sec   (523 perm/sec)   p_kst 2.372385e-04   p_cons 9.999908e-01   p_joint 1.055649e-03

Joint ci ratio: 5.505661e-02	ci left: 1.028092e-03	ci right 1.086502e-03	k: 5063	n:4790000
Cons ci ratio: 5.489827e-06	ci left: 9.999877e-01	ci right 9.999933e-01	k: 4789956	n:4790000
KS ci ratio: 1.161375e-01	ci left: 2.239753e-04	ci right 2.517913e-04	k: 1138	n:4790000
ZNF443   4790000 perm   9175 sec   (522 perm/sec)   p_kst 2.375783e-04   p_cons 9.999908e-01   p_joint 1.056994e-03

Joint ci ratio: 5.392265e-02	ci left: 1.070132e-03	ci right 1.129639e-03	k: 5278	n:4800000
Cons ci ratio: 5.478389e-06	ci left: 9.999877e-01	ci right 9.999933e-01	k: 4799956	n:4800000
KS ci ratio: 1.159341e-01	ci left: 2.243178e-04	ci right 2.521243e-04	k: 1142	n:4800000
ZNF443   4800000 perm   9212 sec   (521 perm/sec)   p_kst 2.379167e-04   p_cons 9.999908e-01   p_joint 1.099583e-03

Joint ci ratio: 5.389717e-02	ci left: 1.068933e-03	ci right 1.128344e-03	k: 5283	n:4810000
Cons ci ratio: 5.467000e-06	ci left: 9.999877e-01	ci right 9.999934e-01	k: 4809956	n:4810000
KS ci ratio: 1.158834e-01	ci left: 2.240533e-04	ci right 2.518140e-04	k: 1143	n:4810000
ZNF443   4810000 perm   9248 sec   (520 perm/sec)   p_kst 2.376299e-04   p_cons 9.999909e-01   p_joint 1.098337e-03

Joint ci ratio: 5.385643e-02	ci left: 1.068352e-03	ci right 1.127685e-03	k: 5291	n:4820000
Cons ci ratio: 5.455657e-06	ci left: 9.999877e-01	ci right 9.999934e-01	k: 4819956	n:4820000
KS ci ratio: 1.157823e-01	ci left: 2.239914e-04	ci right 2.517185e-04	k: 1145	n:4820000
ZNF443   4820000 perm   9285 sec   (519 perm/sec)   p_kst 2.375519e-04   p_cons 9.999909e-01   p_joint 1.097718e-03

Joint ci ratio: 5.378532e-02	ci left: 1.069000e-03	ci right 1.128288e-03	k: 5305	n:4830000
Cons ci ratio: 5.444362e-06	ci left: 9.999878e-01	ci right 9.999934e-01	k: 4829956	n:4830000
KS ci ratio: 1.156814e-01	ci left: 2.239297e-04	ci right 2.516234e-04	k: 1147	n:4830000
ZNF443   4830000 perm   9322 sec   (518 perm/sec)   p_kst 2.374741e-04   p_cons 9.999909e-01   p_joint 1.098344e-03

Joint ci ratio: 5.391267e-02	ci left: 1.061695e-03	ci right 1.120722e-03	k: 5280	n:4840000
Cons ci ratio: 5.433113e-06	ci left: 9.999878e-01	ci right 9.999934e-01	k: 4839956	n:4840000
KS ci ratio: 1.156310e-01	ci left: 2.236677e-04	ci right 2.513161e-04	k: 1148	n:4840000
ZNF443   4840000 perm   9358 sec   (517 perm/sec)   p_kst 2.371901e-04   p_cons 9.999909e-01   p_joint 1.090909e-03

Joint ci ratio: 5.420638e-02	ci left: 1.047912e-03	ci right 1.106500e-03	k: 5223	n:4850000
Cons ci ratio: 5.421911e-06	ci left: 9.999878e-01	ci right 9.999934e-01	k: 4849956	n:4850000
KS ci ratio: 1.155305e-01	ci left: 2.236070e-04	ci right 2.512223e-04	k: 1150	n:4850000
ZNF443   4850000 perm   9395 sec   (516 perm/sec)   p_kst 2.371134e-04   p_cons 9.999909e-01   p_joint 1.076907e-03

Joint ci ratio: 5.415976e-02	ci left: 1.047583e-03	ci right 1.106100e-03	k: 5232	n:4860000
Cons ci ratio: 5.410755e-06	ci left: 9.999878e-01	ci right 9.999934e-01	k: 4859956	n:4860000
KS ci ratio: 1.154804e-01	ci left: 2.233467e-04	ci right 2.509170e-04	k: 1151	n:4860000
ZNF443   4860000 perm   9432 sec   (515 perm/sec)   p_kst 2.368313e-04   p_cons 9.999909e-01   p_joint 1.076543e-03

Joint ci ratio: 5.411325e-02	ci left: 1.047255e-03	ci right 1.105702e-03	k: 5241	n:4870000
Cons ci ratio: 5.399644e-06	ci left: 9.999879e-01	ci right 9.999934e-01	k: 4869956	n:4870000
KS ci ratio: 1.153803e-01	ci left: 2.232869e-04	ci right 2.508243e-04	k: 1153	n:4870000
ZNF443   4870000 perm   9468 sec   (514 perm/sec)   p_kst 2.367556e-04   p_cons 9.999910e-01   p_joint 1.076181e-03

Joint ci ratio: 5.405142e-02	ci left: 1.047535e-03	ci right 1.105929e-03	k: 5253	n:4880000
Cons ci ratio: 5.448124e-06	ci left: 9.999877e-01	ci right 9.999933e-01	k: 4879955	n:4880000
KS ci ratio: 1.152306e-01	ci left: 2.234264e-04	ci right 2.509428e-04	k: 1156	n:4880000
ZNF443   4880000 perm   9505 sec   (513 perm/sec)   p_kst 2.368852e-04   p_cons 9.999908e-01   p_joint 1.076434e-03

Joint ci ratio: 5.398466e-02	ci left: 1.048015e-03	ci right 1.106361e-03	k: 5266	n:4890000
Cons ci ratio: 5.436983e-06	ci left: 9.999877e-01	ci right 9.999933e-01	k: 4889955	n:4890000
KS ci ratio: 1.151311e-01	ci left: 2.233667e-04	ci right 2.508504e-04	k: 1158	n:4890000
ZNF443   4890000 perm   9550 sec   (512 perm/sec)   p_kst 2.368098e-04   p_cons 9.999908e-01   p_joint 1.076892e-03

Joint ci ratio: 5.390793e-02	ci left: 1.048896e-03	ci right 1.107206e-03	k: 5281	n:4900000
Cons ci ratio: 5.425887e-06	ci left: 9.999877e-01	ci right 9.999933e-01	k: 4899955	n:4900000
KS ci ratio: 1.149824e-01	ci left: 2.235054e-04	ci right 2.509683e-04	k: 1161	n:4900000
ZNF443   4900000 perm   9587 sec   (511 perm/sec)   p_kst 2.369388e-04   p_cons 9.999908e-01   p_joint 1.077755e-03

Joint ci ratio: 5.385697e-02	ci left: 1.048769e-03	ci right 1.107015e-03	k: 5291	n:4910000
Cons ci ratio: 5.414836e-06	ci left: 9.999877e-01	ci right 9.999933e-01	k: 4909955	n:4910000
KS ci ratio: 1.149330e-01	ci left: 2.232480e-04	ci right 2.506667e-04	k: 1162	n:4910000
ZNF443   4910000 perm   9624 sec   (510 perm/sec)   p_kst 2.366599e-04   p_cons 9.999908e-01   p_joint 1.077597e-03

Joint ci ratio: 5.380108e-02	ci left: 1.048843e-03	ci right 1.107031e-03	k: 5302	n:4920000
Cons ci ratio: 5.403830e-06	ci left: 9.999878e-01	ci right 9.999933e-01	k: 4919955	n:4920000
KS ci ratio: 1.147358e-01	ci left: 2.235839e-04	ci right 2.509936e-04	k: 1166	n:4920000
ZNF443   4920000 perm   9661 sec   (509 perm/sec)   p_kst 2.369919e-04   p_cons 9.999909e-01   p_joint 1.077642e-03

Joint ci ratio: 5.374537e-02	ci left: 1.048917e-03	ci right 1.107047e-03	k: 5313	n:4930000
Cons ci ratio: 5.392869e-06	ci left: 9.999878e-01	ci right 9.999933e-01	k: 4929955	n:4930000
KS ci ratio: 1.145886e-01	ci left: 2.237215e-04	ci right 2.511104e-04	k: 1169	n:4930000
ZNF443   4930000 perm   9699 sec   (508 perm/sec)   p_kst 2.371197e-04   p_cons 9.999909e-01   p_joint 1.077688e-03

Joint ci ratio: 5.367974e-02	ci left: 1.049390e-03	ci right 1.107473e-03	k: 5326	n:4940000
Cons ci ratio: 5.381952e-06	ci left: 9.999878e-01	ci right 9.999934e-01	k: 4939955	n:4940000
KS ci ratio: 1.142473e-01	ci left: 2.246451e-04	ci right 2.520597e-04	k: 1176	n:4940000
ZNF443   4940000 perm   9736 sec   (507 perm/sec)   p_kst 2.380567e-04   p_cons 9.999909e-01   p_joint 1.078138e-03

Joint ci ratio: 5.360430e-02	ci left: 1.050260e-03	ci right 1.108306e-03	k: 5341	n:4950000
Cons ci ratio: 5.429147e-06	ci left: 9.999876e-01	ci right 9.999932e-01	k: 4949954	n:4950000
KS ci ratio: 1.141020e-01	ci left: 2.247800e-04	ci right 2.521738e-04	k: 1179	n:4950000
ZNF443   4950000 perm   9773 sec   (507 perm/sec)   p_kst 2.381818e-04   p_cons 9.999907e-01   p_joint 1.078990e-03

Joint ci ratio: 5.352917e-02	ci left: 1.051126e-03	ci right 1.109136e-03	k: 5356	n:4960000
Cons ci ratio: 5.418202e-06	ci left: 9.999876e-01	ci right 9.999932e-01	k: 4959954	n:4960000
KS ci ratio: 1.140537e-01	ci left: 2.245227e-04	ci right 2.518728e-04	k: 1180	n:4960000
ZNF443   4960000 perm   9810 sec   (506 perm/sec)   p_kst 2.379032e-04   p_cons 9.999907e-01   p_joint 1.079839e-03

Joint ci ratio: 5.346931e-02	ci left: 1.051393e-03	ci right 1.109352e-03	k: 5368	n:4970000
Cons ci ratio: 5.407300e-06	ci left: 9.999877e-01	ci right 9.999932e-01	k: 4969954	n:4970000
KS ci ratio: 1.139572e-01	ci left: 2.244619e-04	ci right 2.517799e-04	k: 1182	n:4970000
ZNF443   4970000 perm   9847 sec   (505 perm/sec)   p_kst 2.378270e-04   p_cons 9.999907e-01   p_joint 1.080080e-03

Joint ci ratio: 5.269396e-02	ci left: 1.080786e-03	ci right 1.139475e-03	k: 5527	n:4980000
Cons ci ratio: 5.396442e-06	ci left: 9.999877e-01	ci right 9.999932e-01	k: 4979954	n:4980000
KS ci ratio: 1.136693e-01	ci left: 2.251817e-04	ci right 2.525134e-04	k: 1188	n:4980000
ZNF443   4980000 perm   9884 sec   (504 perm/sec)   p_kst 2.385542e-04   p_cons 9.999908e-01   p_joint 1.109839e-03

Joint ci ratio: 5.265589e-02	ci left: 1.080203e-03	ci right 1.138816e-03	k: 5535	n:4990000
Cons ci ratio: 5.442620e-06	ci left: 9.999875e-01	ci right 9.999931e-01	k: 4989953	n:4990000
KS ci ratio: 1.136693e-01	ci left: 2.247304e-04	ci right 2.520073e-04	k: 1188	n:4990000
ZNF443   4990000 perm   9921 sec   (503 perm/sec)   p_kst 2.380762e-04   p_cons 9.999906e-01   p_joint 1.109218e-03

Joint ci ratio: 5.258468e-02	ci left: 1.081003e-03	ci right 1.139578e-03	k: 5550	n:5000000
Cons ci ratio: 5.431735e-06	ci left: 9.999875e-01	ci right 9.999931e-01	k: 4999953	n:5000000
KS ci ratio: 1.136216e-01	ci left: 2.244752e-04	ci right 2.517090e-04	k: 1189	n:5000000
ZNF443   5000000 perm   9958 sec   (502 perm/sec)   p_kst 2.378000e-04   p_cons 9.999906e-01   p_joint 1.110000e-03

Outputting figure to mutsig2_images.part000000000197/ZNF443.4_2032_5000000_0.0002378_0.99999_0.00111.png
                gene_name: ZNF443
               theta_stop: 0.11 
                    nperm: 5000000 
                     p_ks: 0.00024 
        ci_ks_bounds_left: 0.00022 
       ci_ks_bounds_right: 0.00025 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 0.0011 
     ci_joint_bounds_left: 0.0011 
    ci_joint_bounds_right: 0.0011 

Current progress: 33 percent done.
ZNF479
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.045244e-01	ci left: 4.494298e-03	ci right 7.604055e-03	k: 59	n:10000
Cons ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
ZNF479   10000 perm   1 sec   (7621 perm/sec)   p_kst 1.000000e-04   p_cons 1   p_joint 5.900000e-03

Joint ci ratio: 5.772931e-01	ci left: 1.641624e-03	ci right 3.009532e-03	k: 45	n:20000
Cons ci ratio: 3.394650e-04	ci left: 9.996388e-01	ci right 9.999879e-01	k: 19998	n:20000
KS ci ratio: 2.262987e+00	ci left: 1.211069e-05	ci right 3.611872e-04	k: 2	n:20000
ZNF479   20000 perm   3 sec   (6696 perm/sec)   p_kst 1.000000e-04   p_cons 9.999000e-01   p_joint 2.250000e-03

Joint ci ratio: 5.973559e-01	ci left: 1.009177e-03	ci right 1.891927e-03	k: 42	n:30000
Cons ci ratio: 2.263138e-04	ci left: 9.997592e-01	ci right 9.999919e-01	k: 29998	n:30000
KS ci ratio: 2.263062e+00	ci left: 8.073745e-06	ci right 2.408020e-04	k: 2	n:30000
ZNF479   30000 perm   5 sec   (6261 perm/sec)   p_kst 6.666667e-05   p_cons 9.999333e-01   p_joint 1.400000e-03

Joint ci ratio: 5.234587e-01	ci left: 1.036001e-03	ci right 1.789380e-03	k: 55	n:40000
Cons ci ratio: 1.959976e-04	ci left: 9.997808e-01	ci right 9.999845e-01	k: 39997	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
ZNF479   40000 perm   7 sec   (6057 perm/sec)   p_kst 2.500000e-05   p_cons 9.999250e-01   p_joint 1.375000e-03

Joint ci ratio: 5.715163e-01	ci left: 6.736319e-04	ci right 1.226963e-03	k: 46	n:50000
Cons ci ratio: 1.567984e-04	ci left: 9.998247e-01	ci right 9.999876e-01	k: 49997	n:50000
KS ci ratio: 2.263123e+00	ci left: 4.844222e-06	ci right 1.444862e-04	k: 2	n:50000
ZNF479   50000 perm   8 sec   (5895 perm/sec)   p_kst 4.000000e-05   p_cons 9.999400e-01   p_joint 9.200000e-04

Joint ci ratio: 6.821911e-01	ci left: 3.648273e-04	ci right 7.528249e-04	k: 32	n:60000
Cons ci ratio: 1.306656e-04	ci left: 9.998539e-01	ci right 9.999897e-01	k: 59997	n:60000
KS ci ratio: 2.263138e+00	ci left: 4.036847e-06	ci right 1.204062e-04	k: 2	n:60000
ZNF479   60000 perm   10 sec   (5745 perm/sec)   p_kst 3.333333e-05   p_cons 9.999500e-01   p_joint 5.333333e-04

Joint ci ratio: 6.531607e-01	ci left: 3.482923e-04	ci right 6.953110e-04	k: 35	n:70000
Cons ci ratio: 1.119992e-04	ci left: 9.998748e-01	ci right 9.999912e-01	k: 69997	n:70000
KS ci ratio: 2.263148e+00	ci left: 3.460151e-06	ci right 1.032060e-04	k: 2	n:70000
ZNF479   70000 perm   12 sec   (5616 perm/sec)   p_kst 2.857143e-05   p_cons 9.999571e-01   p_joint 5.000000e-04

Joint ci ratio: 6.442910e-01	ci left: 3.151937e-04	ci right 6.229358e-04	k: 36	n:80000
Cons ci ratio: 9.799939e-05	ci left: 9.998904e-01	ci right 9.999923e-01	k: 79997	n:80000
KS ci ratio: 2.263156e+00	ci left: 3.027630e-06	ci right 9.030565e-05	k: 2	n:80000
ZNF479   80000 perm   15 sec   (5496 perm/sec)   p_kst 2.500000e-05   p_cons 9.999625e-01   p_joint 4.500000e-04

Joint ci ratio: 6.196652e-01	ci left: 3.081599e-04	ci right 5.923338e-04	k: 39	n:90000
Cons ci ratio: 8.711063e-05	ci left: 9.999026e-01	ci right 9.999931e-01	k: 89997	n:90000
KS ci ratio: 2.263163e+00	ci left: 2.691226e-06	ci right 8.027198e-05	k: 2	n:90000
ZNF479   90000 perm   17 sec   (5382 perm/sec)   p_kst 2.222222e-05   p_cons 9.999667e-01   p_joint 4.333333e-04

Joint ci ratio: 5.842247e-01	ci left: 3.197223e-04	ci right 5.906350e-04	k: 44	n:100000
Cons ci ratio: 7.839961e-05	ci left: 9.999123e-01	ci right 9.999938e-01	k: 99997	n:100000
KS ci ratio: 1.959951e+00	ci left: 6.186764e-06	ci right 8.767020e-05	k: 3	n:100000
ZNF479   100000 perm   19 sec   (5277 perm/sec)   p_kst 3.000000e-05   p_cons 9.999700e-01   p_joint 4.400000e-04

Joint ci ratio: 5.716660e-01	ci left: 3.061774e-04	ci right 5.577570e-04	k: 46	n:110000
Cons ci ratio: 7.968533e-05	ci left: 9.999069e-01	ci right 9.999901e-01	k: 109996	n:110000
KS ci ratio: 1.959955e+00	ci left: 5.624327e-06	ci right 7.970039e-05	k: 3	n:110000
ZNF479   110000 perm   21 sec   (5159 perm/sec)   p_kst 2.727273e-05   p_cons 9.999636e-01   p_joint 4.181818e-04

Joint ci ratio: 1.087149e+00	ci left: 5.167249e-05	ci right 1.746734e-04	k: 12	n:120000
Cons ci ratio: 8.001700e-05	ci left: 9.999028e-01	ci right 9.999865e-01	k: 119995	n:120000
KS ci ratio: 1.959959e+00	ci left: 5.155631e-06	ci right 7.305885e-05	k: 3	n:120000
ZNF479   120000 perm   24 sec   (5057 perm/sec)   p_kst 2.500000e-05   p_cons 9.999583e-01   p_joint 1.000000e-04

Joint ci ratio: 2.797878e-01	ci left: 1.296971e-03	ci right 1.725759e-03	k: 195	n:130000
Cons ci ratio: 7.386182e-05	ci left: 9.999102e-01	ci right 9.999875e-01	k: 129995	n:130000
KS ci ratio: 1.753037e+00	ci left: 8.383641e-06	ci right 7.877956e-05	k: 4	n:130000
ZNF479   130000 perm   26 sec   (4964 perm/sec)   p_kst 3.076923e-05   p_cons 9.999615e-01   p_joint 1.500000e-03

Joint ci ratio: 2.936285e-01	ci left: 1.084980e-03	ci right 1.464732e-03	k: 177	n:140000
Cons ci ratio: 7.408157e-05	ci left: 9.999067e-01	ci right 9.999843e-01	k: 139994	n:140000
KS ci ratio: 1.753040e+00	ci left: 7.784806e-06	ci right 7.315257e-05	k: 4	n:140000
ZNF479   140000 perm   29 sec   (4877 perm/sec)   p_kst 2.857143e-05   p_cons 9.999571e-01   p_joint 1.264286e-03

Joint ci ratio: 2.888080e-01	ci left: 1.049723e-03	ci right 1.410002e-03	k: 183	n:150000
Cons ci ratio: 6.914276e-05	ci left: 9.999129e-01	ci right 9.999853e-01	k: 149994	n:150000
KS ci ratio: 1.753042e+00	ci left: 7.265815e-06	ci right 6.827584e-05	k: 4	n:150000
ZNF479   150000 perm   31 sec   (4790 perm/sec)   p_kst 2.666667e-05   p_cons 9.999600e-01   p_joint 1.220000e-03

Joint ci ratio: 2.849687e-01	ci left: 1.013114e-03	ci right 1.355374e-03	k: 188	n:160000
Cons ci ratio: 6.929711e-05	ci left: 9.999099e-01	ci right 9.999824e-01	k: 159993	n:160000
KS ci ratio: 1.753044e+00	ci left: 6.811699e-06	ci right 6.400868e-05	k: 4	n:160000
ZNF479   160000 perm   34 sec   (4707 perm/sec)   p_kst 2.500000e-05   p_cons 9.999562e-01   p_joint 1.175000e-03

Joint ci ratio: 2.791257e-01	ci left: 9.972488e-04	ci right 1.326026e-03	k: 196	n:170000
Cons ci ratio: 6.522078e-05	ci left: 9.999152e-01	ci right 9.999834e-01	k: 169993	n:170000
KS ci ratio: 1.753046e+00	ci left: 6.411009e-06	ci right 6.024353e-05	k: 4	n:170000
ZNF479   170000 perm   37 sec   (4625 perm/sec)   p_kst 2.352941e-05   p_cons 9.999588e-01   p_joint 1.152941e-03

Joint ci ratio: 2.912240e-01	ci left: 8.593020e-04	ci right 1.157146e-03	k: 180	n:180000
Cons ci ratio: 6.159737e-05	ci left: 9.999199e-01	ci right 9.999844e-01	k: 179993	n:180000
KS ci ratio: 1.753048e+00	ci left: 6.054840e-06	ci right 5.689673e-05	k: 4	n:180000
ZNF479   180000 perm   40 sec   (4548 perm/sec)   p_kst 2.222222e-05   p_cons 9.999611e-01   p_joint 1.000000e-03

Joint ci ratio: 2.912317e-01	ci left: 8.140727e-04	ci right 1.096248e-03	k: 180	n:190000
Cons ci ratio: 5.835538e-05	ci left: 9.999241e-01	ci right 9.999852e-01	k: 189993	n:190000
KS ci ratio: 1.753050e+00	ci left: 5.736162e-06	ci right 5.390221e-05	k: 4	n:190000
ZNF479   190000 perm   42 sec   (4474 perm/sec)   p_kst 2.105263e-05   p_cons 9.999632e-01   p_joint 9.473684e-04

Joint ci ratio: 2.857603e-01	ci left: 8.058363e-04	ci right 1.078962e-03	k: 187	n:200000
Cons ci ratio: 6.198142e-05	ci left: 9.999146e-01	ci right 9.999794e-01	k: 199991	n:200000
KS ci ratio: 1.753051e+00	ci left: 5.449353e-06	ci right 5.120714e-05	k: 4	n:200000
ZNF479   200000 perm   45 sec   (4402 perm/sec)   p_kst 2.000000e-05   p_cons 9.999550e-01   p_joint 9.350000e-04

Joint ci ratio: 2.961999e-01	ci left: 7.100694e-04	ci right 9.611822e-04	k: 174	n:210000
Cons ci ratio: 5.902989e-05	ci left: 9.999186e-01	ci right 9.999804e-01	k: 209991	n:210000
KS ci ratio: 1.753052e+00	ci left: 5.189859e-06	ci right 4.876875e-05	k: 4	n:210000
ZNF479   210000 perm   48 sec   (4332 perm/sec)   p_kst 1.904762e-05   p_cons 9.999571e-01   p_joint 8.285714e-04

Joint ci ratio: 2.880823e-01	ci left: 7.199185e-04	ci right 9.662670e-04	k: 184	n:220000
Cons ci ratio: 5.634668e-05	ci left: 9.999223e-01	ci right 9.999813e-01	k: 219991	n:220000
KS ci ratio: 1.753053e+00	ci left: 4.953955e-06	ci right 4.655202e-05	k: 4	n:220000
ZNF479   220000 perm   52 sec   (4265 perm/sec)   p_kst 1.818182e-05   p_cons 9.999591e-01   p_joint 8.363636e-04

Joint ci ratio: 2.865416e-01	ci left: 6.966855e-04	ci right 9.335779e-04	k: 186	n:230000
Cons ci ratio: 5.389680e-05	ci left: 9.999257e-01	ci right 9.999821e-01	k: 229991	n:230000
KS ci ratio: 1.753054e+00	ci left: 4.738565e-06	ci right 4.452804e-05	k: 4	n:230000
ZNF479   230000 perm   55 sec   (4199 perm/sec)   p_kst 1.739130e-05   p_cons 9.999609e-01   p_joint 8.086957e-04

Joint ci ratio: 2.798851e-01	ci left: 7.024943e-04	ci right 9.348346e-04	k: 195	n:240000
Cons ci ratio: 5.165107e-05	ci left: 9.999288e-01	ci right 9.999829e-01	k: 239991	n:240000
KS ci ratio: 1.753055e+00	ci left: 4.541124e-06	ci right 4.267273e-05	k: 4	n:240000
ZNF479   240000 perm   58 sec   (4138 perm/sec)   p_kst 1.666667e-05   p_cons 9.999625e-01   p_joint 8.125000e-04

Joint ci ratio: 3.059995e-01	ci left: 5.557738e-04	ci right 7.600913e-04	k: 163	n:250000
Cons ci ratio: 4.958501e-05	ci left: 9.999317e-01	ci right 9.999835e-01	k: 249991	n:250000
KS ci ratio: 1.753056e+00	ci left: 4.359478e-06	ci right 4.096584e-05	k: 4	n:250000
ZNF479   250000 perm   61 sec   (4075 perm/sec)   p_kst 1.600000e-05   p_cons 9.999640e-01   p_joint 6.520000e-04

Joint ci ratio: 7.407691e-01	ci left: 6.843635e-05	ci right 1.510871e-04	k: 27	n:260000
Cons ci ratio: 4.767788e-05	ci left: 9.999343e-01	ci right 9.999842e-01	k: 259991	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
ZNF479   260000 perm   65 sec   (4016 perm/sec)   p_kst 3.846154e-06   p_cons 9.999654e-01   p_joint 1.038462e-04

Joint ci ratio: 7.278853e-01	ci left: 6.891143e-05	ci right 1.498773e-04	k: 28	n:270000
Cons ci ratio: 4.591201e-05	ci left: 9.999367e-01	ci right 9.999848e-01	k: 269991	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
ZNF479   270000 perm   68 sec   (3955 perm/sec)   p_kst 3.703704e-06   p_cons 9.999667e-01   p_joint 1.037037e-04

Joint ci ratio: 7.278867e-01	ci left: 6.645027e-05	ci right 1.445246e-04	k: 28	n:280000
Cons ci ratio: 4.427228e-05	ci left: 9.999390e-01	ci right 9.999853e-01	k: 279991	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
ZNF479   280000 perm   72 sec   (3899 perm/sec)   p_kst 3.571429e-06   p_cons 9.999679e-01   p_joint 1.000000e-04

Joint ci ratio: 6.722339e-01	ci left: 7.833119e-05	ci right 1.598041e-04	k: 33	n:290000
Cons ci ratio: 4.274564e-05	ci left: 9.999411e-01	ci right 9.999858e-01	k: 289991	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
ZNF479   290000 perm   75 sec   (3845 perm/sec)   p_kst 3.448276e-06   p_cons 9.999690e-01   p_joint 1.137931e-04

Joint ci ratio: 6.625612e-01	ci left: 7.848786e-05	ci right 1.583684e-04	k: 34	n:300000
Cons ci ratio: 4.526479e-05	ci left: 9.999344e-01	ci right 9.999817e-01	k: 299989	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
ZNF479   300000 perm   79 sec   (3794 perm/sec)   p_kst 3.333333e-06   p_cons 9.999633e-01   p_joint 1.133333e-04

Joint ci ratio: 6.625625e-01	ci left: 7.595596e-05	ci right 1.532599e-04	k: 34	n:310000
Cons ci ratio: 4.380462e-05	ci left: 9.999365e-01	ci right 9.999823e-01	k: 309989	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
ZNF479   310000 perm   83 sec   (3743 perm/sec)   p_kst 3.225806e-06   p_cons 9.999645e-01   p_joint 1.096774e-04

Joint ci ratio: 8.357168e-01	ci left: 4.062335e-05	ci right 1.003130e-04	k: 21	n:320000
Cons ci ratio: 4.243571e-05	ci left: 9.999385e-01	ci right 9.999828e-01	k: 319989	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
ZNF479   320000 perm   87 sec   (3689 perm/sec)   p_kst 3.125000e-06   p_cons 9.999656e-01   p_joint 6.562500e-05

Joint ci ratio: 8.357177e-01	ci left: 3.939233e-05	ci right 9.727331e-05	k: 21	n:330000
Cons ci ratio: 4.114976e-05	ci left: 9.999404e-01	ci right 9.999834e-01	k: 329989	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
ZNF479   330000 perm   91 sec   (3638 perm/sec)   p_kst 3.030303e-06   p_cons 9.999667e-01   p_joint 6.363636e-05

Joint ci ratio: 8.001372e-01	ci left: 4.288290e-05	ci right 1.015021e-04	k: 23	n:340000
Cons ci ratio: 4.157037e-05	ci left: 9.999383e-01	ci right 9.999818e-01	k: 339988	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
ZNF479   340000 perm   95 sec   (3591 perm/sec)   p_kst 2.941176e-06   p_cons 9.999647e-01   p_joint 6.764706e-05

Joint ci ratio: 8.001381e-01	ci left: 4.165766e-05	ci right 9.860207e-05	k: 23	n:350000
Cons ci ratio: 4.038264e-05	ci left: 9.999401e-01	ci right 9.999823e-01	k: 349988	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
ZNF479   350000 perm   99 sec   (3546 perm/sec)   p_kst 2.857143e-06   p_cons 9.999657e-01   p_joint 6.571429e-05

Joint ci ratio: 7.839717e-01	ci left: 4.271504e-05	ci right 9.919310e-05	k: 24	n:360000
Cons ci ratio: 3.926088e-05	ci left: 9.999418e-01	ci right 9.999828e-01	k: 359988	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
ZNF479   360000 perm   103 sec   (3499 perm/sec)   p_kst 2.777778e-06   p_cons 9.999667e-01   p_joint 6.666667e-05

Joint ci ratio: 7.687472e-01	ci left: 4.372663e-05	ci right 9.974145e-05	k: 25	n:370000
Cons ci ratio: 3.819977e-05	ci left: 9.999433e-01	ci right 9.999832e-01	k: 369988	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
ZNF479   370000 perm   107 sec   (3457 perm/sec)   p_kst 2.702703e-06   p_cons 9.999676e-01   p_joint 6.756757e-05

Joint ci ratio: 7.278970e-01	ci left: 4.896316e-05	ci right 1.064925e-04	k: 28	n:380000
Cons ci ratio: 3.719450e-05	ci left: 9.999448e-01	ci right 9.999837e-01	k: 379988	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
ZNF479   380000 perm   111 sec   (3417 perm/sec)   p_kst 2.631579e-06   p_cons 9.999684e-01   p_joint 7.368421e-05

Joint ci ratio: 7.040239e-01	ci left: 5.190026e-05	ci right 1.098107e-04	k: 30	n:390000
Cons ci ratio: 3.624078e-05	ci left: 9.999463e-01	ci right 9.999841e-01	k: 389988	n:390000
KS ci ratio: 2.263201e+00	ci left: 6.210500e-07	ci right 1.852472e-05	k: 2	n:390000
ZNF479   390000 perm   116 sec   (3376 perm/sec)   p_kst 5.128205e-06   p_cons 9.999692e-01   p_joint 7.692308e-05

Joint ci ratio: 8.992872e-01	ci left: 2.667006e-05	ci right 7.111847e-05	k: 18	n:400000
Cons ci ratio: 3.533476e-05	ci left: 9.999476e-01	ci right 9.999845e-01	k: 399988	n:400000
KS ci ratio: 2.263202e+00	ci left: 6.055238e-07	ci right 1.806160e-05	k: 2	n:400000
ZNF479   400000 perm   120 sec   (3338 perm/sec)   p_kst 5.000000e-06   p_cons 9.999700e-01   p_joint 4.500000e-05

Joint ci ratio: 8.765162e-01	ci left: 2.790081e-05	ci right 7.236699e-05	k: 19	n:410000
Cons ci ratio: 3.577429e-05	ci left: 9.999458e-01	ci right 9.999831e-01	k: 409987	n:410000
KS ci ratio: 2.263202e+00	ci left: 5.907549e-07	ci right 1.762108e-05	k: 2	n:410000
ZNF479   410000 perm   124 sec   (3301 perm/sec)   p_kst 4.878049e-06   p_cons 9.999683e-01   p_joint 4.634146e-05

Joint ci ratio: 9.239320e-01	ci left: 2.357904e-05	ci right 6.480551e-05	k: 17	n:420000
Cons ci ratio: 3.614827e-05	ci left: 9.999441e-01	ci right 9.999818e-01	k: 419986	n:420000
KS ci ratio: 2.263202e+00	ci left: 5.766893e-07	ci right 1.720153e-05	k: 2	n:420000
ZNF479   420000 perm   129 sec   (3263 perm/sec)   p_kst 4.761905e-06   p_cons 9.999667e-01   p_joint 4.047619e-05

Joint ci ratio: 9.239324e-01	ci left: 2.303069e-05	ci right 6.329843e-05	k: 17	n:430000
Cons ci ratio: 3.530761e-05	ci left: 9.999454e-01	ci right 9.999822e-01	k: 429986	n:430000
KS ci ratio: 2.263203e+00	ci left: 5.632779e-07	ci right 1.680150e-05	k: 2	n:430000
ZNF479   430000 perm   133 sec   (3226 perm/sec)   p_kst 4.651163e-06   p_cons 9.999674e-01   p_joint 3.953488e-05

Joint ci ratio: 1.012121e+00	ci left: 1.739540e-05	ci right 5.338493e-05	k: 14	n:440000
Cons ci ratio: 3.450515e-05	ci left: 9.999466e-01	ci right 9.999826e-01	k: 439986	n:440000
KS ci ratio: 2.263203e+00	ci left: 5.504761e-07	ci right 1.641965e-05	k: 2	n:440000
ZNF479   440000 perm   138 sec   (3190 perm/sec)   p_kst 4.545455e-06   p_cons 9.999682e-01   p_joint 3.181818e-05

Joint ci ratio: 1.012122e+00	ci left: 1.700883e-05	ci right 5.219861e-05	k: 14	n:450000
Cons ci ratio: 3.373836e-05	ci left: 9.999478e-01	ci right 9.999830e-01	k: 449986	n:450000
KS ci ratio: 2.263203e+00	ci left: 5.382433e-07	ci right 1.605477e-05	k: 2	n:450000
ZNF479   450000 perm   143 sec   (3154 perm/sec)   p_kst 4.444444e-06   p_cons 9.999689e-01   p_joint 3.111111e-05

Joint ci ratio: 1.012122e+00	ci left: 1.663908e-05	ci right 5.106387e-05	k: 14	n:460000
Cons ci ratio: 3.300491e-05	ci left: 9.999489e-01	ci right 9.999834e-01	k: 459986	n:460000
KS ci ratio: 2.263203e+00	ci left: 5.265423e-07	ci right 1.570575e-05	k: 2	n:460000
ZNF479   460000 perm   147 sec   (3119 perm/sec)   p_kst 4.347826e-06   p_cons 9.999696e-01   p_joint 3.043478e-05

Joint ci ratio: 1.012122e+00	ci left: 1.628505e-05	ci right 4.997741e-05	k: 14	n:470000
Cons ci ratio: 3.336209e-05	ci left: 9.999474e-01	ci right 9.999821e-01	k: 469985	n:470000
KS ci ratio: 2.263203e+00	ci left: 5.153393e-07	ci right 1.537159e-05	k: 2	n:470000
ZNF479   470000 perm   152 sec   (3085 perm/sec)   p_kst 4.255319e-06   p_cons 9.999681e-01   p_joint 2.978723e-05

Joint ci ratio: 9.799826e-01	ci left: 1.749049e-05	ci right 5.154160e-05	k: 15	n:480000
Cons ci ratio: 3.266704e-05	ci left: 9.999485e-01	ci right 9.999825e-01	k: 479985	n:480000
KS ci ratio: 2.263204e+00	ci left: 5.046031e-07	ci right 1.505135e-05	k: 2	n:480000
ZNF479   480000 perm   157 sec   (3051 perm/sec)   p_kst 4.166667e-06   p_cons 9.999687e-01   p_joint 3.125000e-05

Joint ci ratio: 9.799830e-01	ci left: 1.713354e-05	ci right 5.048974e-05	k: 15	n:490000
Cons ci ratio: 3.200036e-05	ci left: 9.999495e-01	ci right 9.999829e-01	k: 489985	n:490000
KS ci ratio: 2.263204e+00	ci left: 4.943050e-07	ci right 1.474418e-05	k: 2	n:490000
ZNF479   490000 perm   162 sec   (3018 perm/sec)   p_kst 4.081633e-06   p_cons 9.999694e-01   p_joint 3.061224e-05

Joint ci ratio: 9.799833e-01	ci left: 1.679087e-05	ci right 4.947996e-05	k: 15	n:500000
Cons ci ratio: 3.136034e-05	ci left: 9.999505e-01	ci right 9.999832e-01	k: 499985	n:500000
KS ci ratio: 2.263204e+00	ci left: 4.844189e-07	ci right 1.444930e-05	k: 2	n:500000
ZNF479   500000 perm   167 sec   (2987 perm/sec)   p_kst 4.000000e-06   p_cons 9.999700e-01   p_joint 3.000000e-05

Joint ci ratio: 9.799837e-01	ci left: 1.646163e-05	ci right 4.850977e-05	k: 15	n:510000
Cons ci ratio: 3.074543e-05	ci left: 9.999515e-01	ci right 9.999835e-01	k: 509985	n:510000
KS ci ratio: 2.263204e+00	ci left: 4.749205e-07	ci right 1.416598e-05	k: 2	n:510000
ZNF479   510000 perm   173 sec   (2955 perm/sec)   p_kst 3.921569e-06   p_cons 9.999706e-01   p_joint 2.941176e-05

Joint ci ratio: 9.507232e-01	ci left: 1.758737e-05	ci right 4.996682e-05	k: 16	n:520000
Cons ci ratio: 3.108223e-05	ci left: 9.999500e-01	ci right 9.999824e-01	k: 519984	n:520000
KS ci ratio: 1.959991e+00	ci left: 1.189756e-06	ci right 1.686005e-05	k: 3	n:520000
ZNF479   520000 perm   178 sec   (2924 perm/sec)   p_kst 5.769231e-06   p_cons 9.999692e-01   p_joint 3.076923e-05

Joint ci ratio: 9.507235e-01	ci left: 1.725553e-05	ci right 4.902406e-05	k: 16	n:530000
Cons ci ratio: 3.049577e-05	ci left: 9.999510e-01	ci right 9.999827e-01	k: 529984	n:530000
KS ci ratio: 1.959991e+00	ci left: 1.167307e-06	ci right 1.654193e-05	k: 3	n:530000
ZNF479   530000 perm   183 sec   (2894 perm/sec)   p_kst 5.660377e-06   p_cons 9.999698e-01   p_joint 3.018868e-05

Joint ci ratio: 8.992930e-01	ci left: 1.975556e-05	ci right 5.268053e-05	k: 18	n:540000
Cons ci ratio: 2.993103e-05	ci left: 9.999519e-01	ci right 9.999831e-01	k: 539984	n:540000
KS ci ratio: 1.753068e+00	ci left: 2.018273e-06	ci right 1.896580e-05	k: 4	n:540000
ZNF479   540000 perm   189 sec   (2864 perm/sec)   p_kst 7.407407e-06   p_cons 9.999704e-01   p_joint 3.333333e-05

Joint ci ratio: 8.992933e-01	ci left: 1.939637e-05	ci right 5.172271e-05	k: 18	n:550000
Cons ci ratio: 3.023881e-05	ci left: 9.999505e-01	ci right 9.999820e-01	k: 549983	n:550000
KS ci ratio: 1.753068e+00	ci left: 1.981577e-06	ci right 1.862096e-05	k: 4	n:550000
ZNF479   550000 perm   194 sec   (2834 perm/sec)   p_kst 7.272727e-06   p_cons 9.999691e-01   p_joint 3.272727e-05

Joint ci ratio: 8.992936e-01	ci left: 1.905000e-05	ci right 5.079910e-05	k: 18	n:560000
Cons ci ratio: 2.969883e-05	ci left: 9.999514e-01	ci right 9.999823e-01	k: 559983	n:560000
KS ci ratio: 1.753068e+00	ci left: 1.946191e-06	ci right 1.828845e-05	k: 4	n:560000
ZNF479   560000 perm   200 sec   (2805 perm/sec)   p_kst 7.142857e-06   p_cons 9.999696e-01   p_joint 3.214286e-05

Joint ci ratio: 8.992939e-01	ci left: 1.871579e-05	ci right 4.990789e-05	k: 18	n:570000
Cons ci ratio: 2.917779e-05	ci left: 9.999522e-01	ci right 9.999826e-01	k: 569983	n:570000
KS ci ratio: 1.753068e+00	ci left: 1.912048e-06	ci right 1.796760e-05	k: 4	n:570000
ZNF479   570000 perm   206 sec   (2773 perm/sec)   p_kst 7.017544e-06   p_cons 9.999702e-01   p_joint 3.157895e-05

Joint ci ratio: 9.239377e-01	ci left: 1.707445e-05	ci right 4.692829e-05	k: 17	n:580000
Cons ci ratio: 2.867472e-05	ci left: 9.999531e-01	ci right 9.999829e-01	k: 579983	n:580000
KS ci ratio: 1.753068e+00	ci left: 1.879081e-06	ci right 1.765782e-05	k: 4	n:580000
ZNF479   580000 perm   211 sec   (2746 perm/sec)   p_kst 6.896552e-06   p_cons 9.999707e-01   p_joint 2.931034e-05

Joint ci ratio: 9.239380e-01	ci left: 1.678505e-05	ci right 4.613290e-05	k: 17	n:590000
Cons ci ratio: 2.818870e-05	ci left: 9.999539e-01	ci right 9.999832e-01	k: 589983	n:590000
KS ci ratio: 1.753068e+00	ci left: 1.847232e-06	ci right 1.735853e-05	k: 4	n:590000
ZNF479   590000 perm   217 sec   (2719 perm/sec)   p_kst 6.779661e-06   p_cons 9.999712e-01   p_joint 2.881356e-05

Joint ci ratio: 8.992947e-01	ci left: 1.778000e-05	ci right 4.741252e-05	k: 18	n:600000
Cons ci ratio: 2.771889e-05	ci left: 9.999546e-01	ci right 9.999835e-01	k: 599983	n:600000
KS ci ratio: 1.753069e+00	ci left: 1.816445e-06	ci right 1.706923e-05	k: 4	n:600000
ZNF479   600000 perm   223 sec   (2693 perm/sec)   p_kst 6.666667e-06   p_cons 9.999717e-01   p_joint 3.000000e-05

Joint ci ratio: 9.239385e-01	ci left: 1.623471e-05	ci right 4.462036e-05	k: 17	n:610000
Cons ci ratio: 2.726447e-05	ci left: 9.999554e-01	ci right 9.999838e-01	k: 609983	n:610000
KS ci ratio: 1.753069e+00	ci left: 1.786667e-06	ci right 1.678940e-05	k: 4	n:610000
ZNF479   610000 perm   229 sec   (2668 perm/sec)   p_kst 6.557377e-06   p_cons 9.999721e-01   p_joint 2.786885e-05

Joint ci ratio: 9.239387e-01	ci left: 1.597286e-05	ci right 4.390068e-05	k: 17	n:620000
Cons ci ratio: 2.682472e-05	ci left: 9.999561e-01	ci right 9.999840e-01	k: 619983	n:620000
KS ci ratio: 1.753069e+00	ci left: 1.757850e-06	ci right 1.651861e-05	k: 4	n:620000
ZNF479   620000 perm   235 sec   (2642 perm/sec)   p_kst 6.451613e-06   p_cons 9.999726e-01   p_joint 2.741935e-05

Joint ci ratio: 9.239389e-01	ci left: 1.571932e-05	ci right 4.320385e-05	k: 17	n:630000
Cons ci ratio: 2.639893e-05	ci left: 9.999568e-01	ci right 9.999843e-01	k: 629983	n:630000
KS ci ratio: 1.753069e+00	ci left: 1.729948e-06	ci right 1.625641e-05	k: 4	n:630000
ZNF479   630000 perm   241 sec   (2618 perm/sec)   p_kst 6.349206e-06   p_cons 9.999730e-01   p_joint 2.698413e-05

Joint ci ratio: 9.239391e-01	ci left: 1.547371e-05	ci right 4.252880e-05	k: 17	n:640000
Cons ci ratio: 2.669855e-05	ci left: 9.999556e-01	ci right 9.999833e-01	k: 639982	n:640000
KS ci ratio: 1.753069e+00	ci left: 1.702917e-06	ci right 1.600240e-05	k: 4	n:640000
ZNF479   640000 perm   247 sec   (2594 perm/sec)   p_kst 6.250000e-06   p_cons 9.999719e-01   p_joint 2.656250e-05

Joint ci ratio: 9.239394e-01	ci left: 1.523565e-05	ci right 4.187451e-05	k: 17	n:650000
Cons ci ratio: 2.628780e-05	ci left: 9.999562e-01	ci right 9.999836e-01	k: 649982	n:650000
KS ci ratio: 1.753069e+00	ci left: 1.676718e-06	ci right 1.575621e-05	k: 4	n:650000
ZNF479   650000 perm   253 sec   (2570 perm/sec)   p_kst 6.153846e-06   p_cons 9.999723e-01   p_joint 2.615385e-05

Joint ci ratio: 9.239396e-01	ci left: 1.500481e-05	ci right 4.124005e-05	k: 17	n:660000
Cons ci ratio: 2.588949e-05	ci left: 9.999569e-01	ci right 9.999838e-01	k: 659982	n:660000
KS ci ratio: 1.753069e+00	ci left: 1.651314e-06	ci right 1.551749e-05	k: 4	n:660000
ZNF479   660000 perm   259 sec   (2547 perm/sec)   p_kst 6.060606e-06   p_cons 9.999727e-01   p_joint 2.575758e-05

Joint ci ratio: 8.992963e-01	ci left: 1.592237e-05	ci right 4.245901e-05	k: 18	n:670000
Cons ci ratio: 2.550308e-05	ci left: 9.999575e-01	ci right 9.999841e-01	k: 669982	n:670000
KS ci ratio: 1.753069e+00	ci left: 1.626667e-06	ci right 1.528588e-05	k: 4	n:670000
ZNF479   670000 perm   265 sec   (2524 perm/sec)   p_kst 5.970149e-06   p_cons 9.999731e-01   p_joint 2.686567e-05

Joint ci ratio: 8.992965e-01	ci left: 1.568822e-05	ci right 4.183462e-05	k: 18	n:680000
Cons ci ratio: 2.512803e-05	ci left: 9.999582e-01	ci right 9.999843e-01	k: 679982	n:680000
KS ci ratio: 1.753070e+00	ci left: 1.602745e-06	ci right 1.506109e-05	k: 4	n:680000
ZNF479   680000 perm   272 sec   (2502 perm/sec)   p_kst 5.882353e-06   p_cons 9.999735e-01   p_joint 2.647059e-05

Joint ci ratio: 8.992966e-01	ci left: 1.546085e-05	ci right 4.122833e-05	k: 18	n:690000
Cons ci ratio: 2.476385e-05	ci left: 9.999588e-01	ci right 9.999845e-01	k: 689982	n:690000
KS ci ratio: 1.753070e+00	ci left: 1.579517e-06	ci right 1.484282e-05	k: 4	n:690000
ZNF479   690000 perm   278 sec   (2479 perm/sec)   p_kst 5.797101e-06   p_cons 9.999739e-01   p_joint 2.608696e-05

Joint ci ratio: 8.992968e-01	ci left: 1.523998e-05	ci right 4.063935e-05	k: 18	n:700000
Cons ci ratio: 2.441008e-05	ci left: 9.999594e-01	ci right 9.999848e-01	k: 699982	n:700000
KS ci ratio: 1.753070e+00	ci left: 1.556953e-06	ci right 1.463078e-05	k: 4	n:700000
ZNF479   700000 perm   285 sec   (2458 perm/sec)   p_kst 5.714286e-06   p_cons 9.999743e-01   p_joint 2.571429e-05

Joint ci ratio: 8.992970e-01	ci left: 1.502534e-05	ci right 4.006697e-05	k: 18	n:710000
Cons ci ratio: 2.406627e-05	ci left: 9.999599e-01	ci right 9.999850e-01	k: 709982	n:710000
KS ci ratio: 1.753070e+00	ci left: 1.535024e-06	ci right 1.442471e-05	k: 4	n:710000
ZNF479   710000 perm   291 sec   (2437 perm/sec)   p_kst 5.633803e-06   p_cons 9.999746e-01   p_joint 2.535211e-05

Joint ci ratio: 8.992972e-01	ci left: 1.481665e-05	ci right 3.951049e-05	k: 18	n:720000
Cons ci ratio: 2.373201e-05	ci left: 9.999605e-01	ci right 9.999852e-01	k: 719982	n:720000
KS ci ratio: 1.753070e+00	ci left: 1.513704e-06	ci right 1.422437e-05	k: 4	n:720000
ZNF479   720000 perm   298 sec   (2417 perm/sec)   p_kst 5.555556e-06   p_cons 9.999750e-01   p_joint 2.500000e-05

Joint ci ratio: 8.992974e-01	ci left: 1.461368e-05	ci right 3.896926e-05	k: 18	n:730000
Cons ci ratio: 2.340691e-05	ci left: 9.999610e-01	ci right 9.999854e-01	k: 729982	n:730000
KS ci ratio: 1.753070e+00	ci left: 1.492968e-06	ci right 1.402951e-05	k: 4	n:730000
ZNF479   730000 perm   305 sec   (2397 perm/sec)   p_kst 5.479452e-06   p_cons 9.999753e-01   p_joint 2.465753e-05

Joint ci ratio: 8.992975e-01	ci left: 1.441620e-05	ci right 3.844265e-05	k: 18	n:740000
Cons ci ratio: 2.309060e-05	ci left: 9.999616e-01	ci right 9.999856e-01	k: 739982	n:740000
KS ci ratio: 1.753070e+00	ci left: 1.472793e-06	ci right 1.383993e-05	k: 4	n:740000
ZNF479   740000 perm   311 sec   (2377 perm/sec)   p_kst 5.405405e-06   p_cons 9.999757e-01   p_joint 2.432432e-05

Joint ci ratio: 8.992977e-01	ci left: 1.422398e-05	ci right 3.793008e-05	k: 18	n:750000
Cons ci ratio: 2.278272e-05	ci left: 9.999621e-01	ci right 9.999858e-01	k: 749982	n:750000
KS ci ratio: 1.753070e+00	ci left: 1.453156e-06	ci right 1.365539e-05	k: 4	n:750000
ZNF479   750000 perm   318 sec   (2357 perm/sec)   p_kst 5.333333e-06   p_cons 9.999760e-01   p_joint 2.400000e-05

Joint ci ratio: 8.992978e-01	ci left: 1.403682e-05	ci right 3.743101e-05	k: 18	n:760000
Cons ci ratio: 2.248295e-05	ci left: 9.999626e-01	ci right 9.999860e-01	k: 759982	n:760000
KS ci ratio: 1.753070e+00	ci left: 1.434035e-06	ci right 1.347572e-05	k: 4	n:760000
ZNF479   760000 perm   325 sec   (2338 perm/sec)   p_kst 5.263158e-06   p_cons 9.999763e-01   p_joint 2.368421e-05

Joint ci ratio: 8.992980e-01	ci left: 1.385453e-05	ci right 3.694489e-05	k: 18	n:770000
Cons ci ratio: 2.276746e-05	ci left: 9.999615e-01	ci right 9.999851e-01	k: 769981	n:770000
KS ci ratio: 1.753070e+00	ci left: 1.415411e-06	ci right 1.330071e-05	k: 4	n:770000
ZNF479   770000 perm   332 sec   (2318 perm/sec)   p_kst 5.194805e-06   p_cons 9.999753e-01   p_joint 2.337662e-05

Joint ci ratio: 8.992981e-01	ci left: 1.367690e-05	ci right 3.647124e-05	k: 18	n:780000
Cons ci ratio: 2.247557e-05	ci left: 9.999620e-01	ci right 9.999853e-01	k: 779981	n:780000
KS ci ratio: 1.753071e+00	ci left: 1.397265e-06	ci right 1.313019e-05	k: 4	n:780000
ZNF479   780000 perm   339 sec   (2300 perm/sec)   p_kst 5.128205e-06   p_cons 9.999756e-01   p_joint 2.307692e-05

Joint ci ratio: 8.992983e-01	ci left: 1.350378e-05	ci right 3.600959e-05	k: 18	n:790000
Cons ci ratio: 2.273909e-05	ci left: 9.999609e-01	ci right 9.999845e-01	k: 789980	n:790000
KS ci ratio: 1.753071e+00	ci left: 1.379578e-06	ci right 1.296399e-05	k: 4	n:790000
ZNF479   790000 perm   346 sec   (2281 perm/sec)   p_kst 5.063291e-06   p_cons 9.999747e-01   p_joint 2.278481e-05

Joint ci ratio: 8.992984e-01	ci left: 1.333498e-05	ci right 3.555947e-05	k: 18	n:800000
Cons ci ratio: 2.245485e-05	ci left: 9.999614e-01	ci right 9.999847e-01	k: 799980	n:800000
KS ci ratio: 1.753071e+00	ci left: 1.362333e-06	ci right 1.280194e-05	k: 4	n:800000
ZNF479   800000 perm   354 sec   (2263 perm/sec)   p_kst 5.000000e-06   p_cons 9.999750e-01   p_joint 2.250000e-05

Joint ci ratio: 8.765273e-01	ci left: 1.412258e-05	ci right 3.663044e-05	k: 19	n:810000
Cons ci ratio: 2.269953e-05	ci left: 9.999604e-01	ci right 9.999840e-01	k: 809979	n:810000
KS ci ratio: 1.753071e+00	ci left: 1.345514e-06	ci right 1.264389e-05	k: 4	n:810000
ZNF479   810000 perm   361 sec   (2245 perm/sec)   p_kst 4.938272e-06   p_cons 9.999741e-01   p_joint 2.345679e-05

Joint ci ratio: 8.765274e-01	ci left: 1.395035e-05	ci right 3.618373e-05	k: 19	n:820000
Cons ci ratio: 2.292667e-05	ci left: 9.999594e-01	ci right 9.999832e-01	k: 819978	n:820000
KS ci ratio: 1.753071e+00	ci left: 1.329106e-06	ci right 1.248969e-05	k: 4	n:820000
ZNF479   820000 perm   368 sec   (2227 perm/sec)   p_kst 4.878049e-06   p_cons 9.999732e-01   p_joint 2.317073e-05

Joint ci ratio: 8.554028e-01	ci left: 1.471876e-05	ci right 3.721467e-05	k: 20	n:830000
Cons ci ratio: 2.265044e-05	ci left: 9.999599e-01	ci right 9.999834e-01	k: 829978	n:830000
KS ci ratio: 1.753071e+00	ci left: 1.313092e-06	ci right 1.233922e-05	k: 4	n:830000
ZNF479   830000 perm   376 sec   (2209 perm/sec)   p_kst 4.819277e-06   p_cons 9.999735e-01   p_joint 2.409639e-05

Joint ci ratio: 8.554029e-01	ci left: 1.454353e-05	ci right 3.677164e-05	k: 20	n:840000
Cons ci ratio: 2.286216e-05	ci left: 9.999589e-01	ci right 9.999826e-01	k: 839977	n:840000
KS ci ratio: 1.753071e+00	ci left: 1.297460e-06	ci right 1.219232e-05	k: 4	n:840000
ZNF479   840000 perm   383 sec   (2192 perm/sec)   p_kst 4.761905e-06   p_cons 9.999726e-01   p_joint 2.380952e-05

Joint ci ratio: 8.554031e-01	ci left: 1.437243e-05	ci right 3.633904e-05	k: 20	n:850000
Cons ci ratio: 2.259319e-05	ci left: 9.999594e-01	ci right 9.999828e-01	k: 849977	n:850000
KS ci ratio: 1.753071e+00	ci left: 1.282196e-06	ci right 1.204888e-05	k: 4	n:850000
ZNF479   850000 perm   391 sec   (2175 perm/sec)   p_kst 4.705882e-06   p_cons 9.999729e-01   p_joint 2.352941e-05

Joint ci ratio: 8.554032e-01	ci left: 1.420531e-05	ci right 3.591649e-05	k: 20	n:860000
Cons ci ratio: 2.233048e-05	ci left: 9.999599e-01	ci right 9.999830e-01	k: 859977	n:860000
KS ci ratio: 1.753071e+00	ci left: 1.267287e-06	ci right 1.190878e-05	k: 4	n:860000
ZNF479   860000 perm   398 sec   (2158 perm/sec)   p_kst 4.651163e-06   p_cons 9.999733e-01   p_joint 2.325581e-05

Joint ci ratio: 8.554033e-01	ci left: 1.404203e-05	ci right 3.550366e-05	k: 20	n:870000
Cons ci ratio: 2.252899e-05	ci left: 9.999590e-01	ci right 9.999823e-01	k: 869976	n:870000
KS ci ratio: 1.753071e+00	ci left: 1.252720e-06	ci right 1.177190e-05	k: 4	n:870000
ZNF479   870000 perm   406 sec   (2141 perm/sec)   p_kst 4.597701e-06   p_cons 9.999724e-01   p_joint 2.298851e-05

Joint ci ratio: 8.765282e-01	ci left: 1.299919e-05	ci right 3.371667e-05	k: 19	n:880000
Cons ci ratio: 2.227298e-05	ci left: 9.999594e-01	ci right 9.999825e-01	k: 879976	n:880000
KS ci ratio: 1.753071e+00	ci left: 1.238485e-06	ci right 1.163813e-05	k: 4	n:880000
ZNF479   880000 perm   414 sec   (2125 perm/sec)   p_kst 4.545455e-06   p_cons 9.999727e-01   p_joint 2.159091e-05

Joint ci ratio: 8.765283e-01	ci left: 1.285313e-05	ci right 3.333784e-05	k: 19	n:890000
Cons ci ratio: 2.202272e-05	ci left: 9.999599e-01	ci right 9.999827e-01	k: 889976	n:890000
KS ci ratio: 1.753071e+00	ci left: 1.224569e-06	ci right 1.150736e-05	k: 4	n:890000
ZNF479   890000 perm   422 sec   (2109 perm/sec)   p_kst 4.494382e-06   p_cons 9.999730e-01   p_joint 2.134831e-05

Joint ci ratio: 8.765284e-01	ci left: 1.271031e-05	ci right 3.296742e-05	k: 19	n:900000
Cons ci ratio: 2.177802e-05	ci left: 9.999603e-01	ci right 9.999829e-01	k: 899976	n:900000
KS ci ratio: 1.753071e+00	ci left: 1.210963e-06	ci right 1.137950e-05	k: 4	n:900000
ZNF479   900000 perm   430 sec   (2094 perm/sec)   p_kst 4.444444e-06   p_cons 9.999733e-01   p_joint 2.111111e-05

Joint ci ratio: 8.765285e-01	ci left: 1.257064e-05	ci right 3.260514e-05	k: 19	n:910000
Cons ci ratio: 2.238370e-05	ci left: 9.999581e-01	ci right 9.999813e-01	k: 909974	n:910000
KS ci ratio: 1.753072e+00	ci left: 1.197656e-06	ci right 1.125445e-05	k: 4	n:910000
ZNF479   910000 perm   438 sec   (2078 perm/sec)   p_kst 4.395604e-06   p_cons 9.999714e-01   p_joint 2.087912e-05

Joint ci ratio: 8.765286e-01	ci left: 1.243400e-05	ci right 3.225074e-05	k: 19	n:920000
Cons ci ratio: 2.214039e-05	ci left: 9.999586e-01	ci right 9.999815e-01	k: 919974	n:920000
KS ci ratio: 1.753072e+00	ci left: 1.184638e-06	ci right 1.113212e-05	k: 4	n:920000
ZNF479   920000 perm   446 sec   (2063 perm/sec)   p_kst 4.347826e-06   p_cons 9.999717e-01   p_joint 2.065217e-05

Joint ci ratio: 1.131599e+00	ci left: 5.904488e-06	ci right 2.116338e-05	k: 11	n:930000
Cons ci ratio: 2.190232e-05	ci left: 9.999590e-01	ci right 9.999817e-01	k: 929974	n:930000
KS ci ratio: 1.753072e+00	ci left: 1.171899e-06	ci right 1.101242e-05	k: 4	n:930000
ZNF479   930000 perm   454 sec   (2048 perm/sec)   p_kst 4.301075e-06   p_cons 9.999720e-01   p_joint 1.182796e-05

Joint ci ratio: 1.131599e+00	ci left: 5.841674e-06	ci right 2.093824e-05	k: 11	n:940000
Cons ci ratio: 2.166931e-05	ci left: 9.999595e-01	ci right 9.999819e-01	k: 939974	n:940000
KS ci ratio: 1.753072e+00	ci left: 1.159432e-06	ci right 1.089527e-05	k: 4	n:940000
ZNF479   940000 perm   462 sec   (2033 perm/sec)   p_kst 4.255319e-06   p_cons 9.999723e-01   p_joint 1.170213e-05

Joint ci ratio: 1.131599e+00	ci left: 5.780183e-06	ci right 2.071784e-05	k: 11	n:950000
Cons ci ratio: 2.183468e-05	ci left: 9.999586e-01	ci right 9.999813e-01	k: 949973	n:950000
KS ci ratio: 1.753072e+00	ci left: 1.147228e-06	ci right 1.078058e-05	k: 4	n:950000
ZNF479   950000 perm   471 sec   (2018 perm/sec)   p_kst 4.210526e-06   p_cons 9.999716e-01   p_joint 1.157895e-05

Joint ci ratio: 1.131599e+00	ci left: 5.719972e-06	ci right 2.050203e-05	k: 11	n:960000
Cons ci ratio: 2.160723e-05	ci left: 9.999591e-01	ci right 9.999815e-01	k: 959973	n:960000
KS ci ratio: 1.753072e+00	ci left: 1.135278e-06	ci right 1.066829e-05	k: 4	n:960000
ZNF479   960000 perm   479 sec   (2003 perm/sec)   p_kst 4.166667e-06   p_cons 9.999719e-01   p_joint 1.145833e-05

Joint ci ratio: 1.131599e+00	ci left: 5.661003e-06	ci right 2.029067e-05	k: 11	n:970000
Cons ci ratio: 2.176300e-05	ci left: 9.999583e-01	ci right 9.999808e-01	k: 969972	n:970000
KS ci ratio: 1.753072e+00	ci left: 1.123574e-06	ci right 1.055830e-05	k: 4	n:970000
ZNF479   970000 perm   488 sec   (1988 perm/sec)   p_kst 4.123711e-06   p_cons 9.999711e-01   p_joint 1.134021e-05

Joint ci ratio: 1.131599e+00	ci left: 5.603238e-06	ci right 2.008362e-05	k: 11	n:980000
Cons ci ratio: 2.190918e-05	ci left: 9.999575e-01	ci right 9.999802e-01	k: 979971	n:980000
KS ci ratio: 1.753072e+00	ci left: 1.112109e-06	ci right 1.045057e-05	k: 4	n:980000
ZNF479   980000 perm   496 sec   (1974 perm/sec)   p_kst 4.081633e-06   p_cons 9.999704e-01   p_joint 1.122449e-05

Joint ci ratio: 1.087205e+00	ci left: 6.263222e-06	ci right 2.117322e-05	k: 12	n:990000
Cons ci ratio: 2.168787e-05	ci left: 9.999579e-01	ci right 9.999804e-01	k: 989971	n:990000
KS ci ratio: 1.753072e+00	ci left: 1.100875e-06	ci right 1.034501e-05	k: 4	n:990000
ZNF479   990000 perm   505 sec   (1960 perm/sec)   p_kst 4.040404e-06   p_cons 9.999707e-01   p_joint 1.212121e-05

Joint ci ratio: 1.087205e+00	ci left: 6.200590e-06	ci right 2.096149e-05	k: 12	n:1000000
Cons ci ratio: 2.147099e-05	ci left: 9.999584e-01	ci right 9.999806e-01	k: 999971	n:1000000
KS ci ratio: 1.753072e+00	ci left: 1.089866e-06	ci right 1.024156e-05	k: 4	n:1000000
ZNF479   1000000 perm   514 sec   (1947 perm/sec)   p_kst 4.000000e-06   p_cons 9.999710e-01   p_joint 1.200000e-05

Joint ci ratio: 1.087205e+00	ci left: 6.139198e-06	ci right 2.075395e-05	k: 12	n:1010000
Cons ci ratio: 2.125841e-05	ci left: 9.999588e-01	ci right 9.999808e-01	k: 1009971	n:1010000
KS ci ratio: 1.753072e+00	ci left: 1.079076e-06	ci right 1.014016e-05	k: 4	n:1010000
ZNF479   1010000 perm   522 sec   (1933 perm/sec)   p_kst 3.960396e-06   p_cons 9.999713e-01   p_joint 1.188119e-05

Joint ci ratio: 1.087205e+00	ci left: 6.079010e-06	ci right 2.055048e-05	k: 12	n:1020000
Cons ci ratio: 2.139796e-05	ci left: 9.999580e-01	ci right 9.999802e-01	k: 1019970	n:1020000
KS ci ratio: 1.753072e+00	ci left: 1.068496e-06	ci right 1.004074e-05	k: 4	n:1020000
ZNF479   1020000 perm   531 sec   (1920 perm/sec)   p_kst 3.921569e-06   p_cons 9.999706e-01   p_joint 1.176471e-05

Joint ci ratio: 1.087205e+00	ci left: 6.019990e-06	ci right 2.035096e-05	k: 12	n:1030000
Cons ci ratio: 2.152928e-05	ci left: 9.999573e-01	ci right 9.999796e-01	k: 1029969	n:1030000
KS ci ratio: 1.753072e+00	ci left: 1.058123e-06	ci right 9.943260e-06	k: 4	n:1030000
ZNF479   1030000 perm   540 sec   (1907 perm/sec)   p_kst 3.883495e-06   p_cons 9.999699e-01   p_joint 1.165049e-05

Joint ci ratio: 1.087205e+00	ci left: 5.962105e-06	ci right 2.015528e-05	k: 12	n:1040000
Cons ci ratio: 2.132227e-05	ci left: 9.999577e-01	ci right 9.999797e-01	k: 1039969	n:1040000
KS ci ratio: 1.753072e+00	ci left: 1.047948e-06	ci right 9.847652e-06	k: 4	n:1040000
ZNF479   1040000 perm   549 sec   (1894 perm/sec)   p_kst 3.846154e-06   p_cons 9.999702e-01   p_joint 1.153846e-05

Joint ci ratio: 1.047657e+00	ci left: 6.592352e-06	ci right 2.117171e-05	k: 13	n:1050000
Cons ci ratio: 2.176919e-05	ci left: 9.999559e-01	ci right 9.999784e-01	k: 1049967	n:1050000
KS ci ratio: 1.753072e+00	ci left: 1.037968e-06	ci right 9.753865e-06	k: 4	n:1050000
ZNF479   1050000 perm   558 sec   (1882 perm/sec)   p_kst 3.809524e-06   p_cons 9.999686e-01   p_joint 1.238095e-05

Joint ci ratio: 1.047657e+00	ci left: 6.530160e-06	ci right 2.097198e-05	k: 13	n:1060000
Cons ci ratio: 2.156382e-05	ci left: 9.999563e-01	ci right 9.999786e-01	k: 1059967	n:1060000
KS ci ratio: 1.753072e+00	ci left: 1.028176e-06	ci right 9.661848e-06	k: 4	n:1060000
ZNF479   1060000 perm   567 sec   (1868 perm/sec)   p_kst 3.773585e-06   p_cons 9.999689e-01   p_joint 1.226415e-05

Joint ci ratio: 1.047657e+00	ci left: 6.469130e-06	ci right 2.077598e-05	k: 13	n:1070000
Cons ci ratio: 2.167417e-05	ci left: 9.999556e-01	ci right 9.999780e-01	k: 1069966	n:1070000
KS ci ratio: 1.753072e+00	ci left: 1.018567e-06	ci right 9.571550e-06	k: 4	n:1070000
ZNF479   1070000 perm   577 sec   (1856 perm/sec)   p_kst 3.738318e-06   p_cons 9.999682e-01   p_joint 1.214953e-05

Joint ci ratio: 1.047657e+00	ci left: 6.409230e-06	ci right 2.058361e-05	k: 13	n:1080000
Cons ci ratio: 2.147348e-05	ci left: 9.999560e-01	ci right 9.999782e-01	k: 1079966	n:1080000
KS ci ratio: 1.753072e+00	ci left: 1.009135e-06	ci right 9.482925e-06	k: 4	n:1080000
ZNF479   1080000 perm   586 sec   (1844 perm/sec)   p_kst 3.703704e-06   p_cons 9.999685e-01   p_joint 1.203704e-05

Joint ci ratio: 1.181918e+00	ci left: 4.399448e-06	ci right 1.687182e-05	k: 10	n:1090000
Cons ci ratio: 2.127647e-05	ci left: 9.999564e-01	ci right 9.999784e-01	k: 1089966	n:1090000
KS ci ratio: 1.753072e+00	ci left: 9.998774e-07	ci right 9.395926e-06	k: 4	n:1090000
ZNF479   1090000 perm   595 sec   (1832 perm/sec)   p_kst 3.669725e-06   p_cons 9.999688e-01   p_joint 9.174312e-06

Joint ci ratio: 1.181918e+00	ci left: 4.359453e-06	ci right 1.671844e-05	k: 10	n:1100000
Cons ci ratio: 2.108304e-05	ci left: 9.999568e-01	ci right 9.999786e-01	k: 1099966	n:1100000
KS ci ratio: 1.753073e+00	ci left: 9.907876e-07	ci right 9.310509e-06	k: 4	n:1100000
ZNF479   1100000 perm   605 sec   (1820 perm/sec)   p_kst 3.636364e-06   p_cons 9.999691e-01   p_joint 9.090909e-06

Joint ci ratio: 1.181918e+00	ci left: 4.320178e-06	ci right 1.656783e-05	k: 10	n:1110000
Cons ci ratio: 2.089310e-05	ci left: 9.999572e-01	ci right 9.999788e-01	k: 1109966	n:1110000
KS ci ratio: 1.753073e+00	ci left: 9.818615e-07	ci right 9.226631e-06	k: 4	n:1110000
ZNF479   1110000 perm   614 sec   (1808 perm/sec)   p_kst 3.603604e-06   p_cons 9.999694e-01   p_joint 9.009009e-06

Joint ci ratio: 1.131600e+00	ci left: 4.902832e-06	ci right 1.757318e-05	k: 11	n:1120000
Cons ci ratio: 2.070656e-05	ci left: 9.999576e-01	ci right 9.999790e-01	k: 1119966	n:1120000
KS ci ratio: 1.600328e+00	ci left: 1.449543e-06	ci right 1.041812e-05	k: 5	n:1120000
ZNF479   1120000 perm   623 sec   (1796 perm/sec)   p_kst 4.464286e-06   p_cons 9.999696e-01   p_joint 9.821429e-06

Joint ci ratio: 1.131600e+00	ci left: 4.859444e-06	ci right 1.741767e-05	k: 11	n:1130000
Cons ci ratio: 2.052331e-05	ci left: 9.999580e-01	ci right 9.999792e-01	k: 1129966	n:1130000
KS ci ratio: 1.600328e+00	ci left: 1.436715e-06	ci right 1.032593e-05	k: 5	n:1130000
ZNF479   1130000 perm   633 sec   (1784 perm/sec)   p_kst 4.424779e-06   p_cons 9.999699e-01   p_joint 9.734513e-06

Joint ci ratio: 1.131600e+00	ci left: 4.816817e-06	ci right 1.726488e-05	k: 11	n:1140000
Cons ci ratio: 2.063186e-05	ci left: 9.999573e-01	ci right 9.999786e-01	k: 1139965	n:1140000
KS ci ratio: 1.600328e+00	ci left: 1.424112e-06	ci right 1.023535e-05	k: 5	n:1140000
ZNF479   1140000 perm   643 sec   (1773 perm/sec)   p_kst 4.385965e-06   p_cons 9.999693e-01   p_joint 9.649123e-06

Joint ci ratio: 1.131600e+00	ci left: 4.774931e-06	ci right 1.711475e-05	k: 11	n:1150000
Cons ci ratio: 2.073457e-05	ci left: 9.999567e-01	ci right 9.999781e-01	k: 1149964	n:1150000
KS ci ratio: 1.600328e+00	ci left: 1.411729e-06	ci right 1.014635e-05	k: 5	n:1150000
ZNF479   1150000 perm   653 sec   (1760 perm/sec)   p_kst 4.347826e-06   p_cons 9.999687e-01   p_joint 9.565217e-06

Joint ci ratio: 1.131600e+00	ci left: 4.733768e-06	ci right 1.696721e-05	k: 11	n:1160000
Cons ci ratio: 2.055583e-05	ci left: 9.999570e-01	ci right 9.999783e-01	k: 1159964	n:1160000
KS ci ratio: 1.600328e+00	ci left: 1.399559e-06	ci right 1.005888e-05	k: 5	n:1160000
ZNF479   1160000 perm   663 sec   (1750 perm/sec)   p_kst 4.310345e-06   p_cons 9.999690e-01   p_joint 9.482759e-06

Joint ci ratio: 1.131600e+00	ci left: 4.693309e-06	ci right 1.682219e-05	k: 11	n:1170000
Cons ci ratio: 2.038013e-05	ci left: 9.999574e-01	ci right 9.999784e-01	k: 1169964	n:1170000
KS ci ratio: 1.600329e+00	ci left: 1.387597e-06	ci right 9.972905e-06	k: 5	n:1170000
ZNF479   1170000 perm   673 sec   (1739 perm/sec)   p_kst 4.273504e-06   p_cons 9.999692e-01   p_joint 9.401709e-06

Joint ci ratio: 1.087206e+00	ci left: 5.254735e-06	ci right 1.776399e-05	k: 12	n:1180000
Cons ci ratio: 2.020742e-05	ci left: 9.999578e-01	ci right 9.999786e-01	k: 1179964	n:1180000
KS ci ratio: 1.600329e+00	ci left: 1.375837e-06	ci right 9.888389e-06	k: 5	n:1180000
ZNF479   1180000 perm   683 sec   (1729 perm/sec)   p_kst 4.237288e-06   p_cons 9.999695e-01   p_joint 1.016949e-05

Joint ci ratio: 1.047657e+00	ci left: 5.816779e-06	ci right 1.868093e-05	k: 13	n:1190000
Cons ci ratio: 2.030659e-05	ci left: 9.999571e-01	ci right 9.999781e-01	k: 1189963	n:1190000
KS ci ratio: 1.600329e+00	ci left: 1.364276e-06	ci right 9.805294e-06	k: 5	n:1190000
ZNF479   1190000 perm   693 sec   (1718 perm/sec)   p_kst 4.201681e-06   p_cons 9.999689e-01   p_joint 1.092437e-05

Joint ci ratio: 1.047658e+00	ci left: 5.768306e-06	ci right 1.852526e-05	k: 13	n:1200000
Cons ci ratio: 2.013736e-05	ci left: 9.999575e-01	ci right 9.999783e-01	k: 1199963	n:1200000
KS ci ratio: 1.600329e+00	ci left: 1.352907e-06	ci right 9.723583e-06	k: 5	n:1200000
ZNF479   1200000 perm   703 sec   (1708 perm/sec)   p_kst 4.166667e-06   p_cons 9.999692e-01   p_joint 1.083333e-05

Joint ci ratio: 1.047658e+00	ci left: 5.720634e-06	ci right 1.837216e-05	k: 13	n:1210000
Cons ci ratio: 1.997094e-05	ci left: 9.999579e-01	ci right 9.999785e-01	k: 1209963	n:1210000
KS ci ratio: 1.600329e+00	ci left: 1.341726e-06	ci right 9.643223e-06	k: 5	n:1210000
ZNF479   1210000 perm   713 sec   (1697 perm/sec)   p_kst 4.132231e-06   p_cons 9.999694e-01   p_joint 1.074380e-05

Joint ci ratio: 1.012133e+00	ci left: 6.273727e-06	ci right 1.925371e-05	k: 14	n:1220000
Cons ci ratio: 1.980724e-05	ci left: 9.999582e-01	ci right 9.999786e-01	k: 1219963	n:1220000
KS ci ratio: 1.600329e+00	ci left: 1.330728e-06	ci right 9.564180e-06	k: 5	n:1220000
ZNF479   1220000 perm   723 sec   (1687 perm/sec)   p_kst 4.098361e-06   p_cons 9.999697e-01   p_joint 1.147541e-05

Joint ci ratio: 1.012133e+00	ci left: 6.222721e-06	ci right 1.909718e-05	k: 14	n:1230000
Cons ci ratio: 1.964620e-05	ci left: 9.999585e-01	ci right 9.999788e-01	k: 1229963	n:1230000
KS ci ratio: 1.600329e+00	ci left: 1.319909e-06	ci right 9.486423e-06	k: 5	n:1230000
ZNF479   1230000 perm   734 sec   (1677 perm/sec)   p_kst 4.065041e-06   p_cons 9.999699e-01   p_joint 1.138211e-05

Joint ci ratio: 1.012133e+00	ci left: 6.172538e-06	ci right 1.894317e-05	k: 14	n:1240000
Cons ci ratio: 1.948776e-05	ci left: 9.999589e-01	ci right 9.999790e-01	k: 1239963	n:1240000
KS ci ratio: 1.600329e+00	ci left: 1.309264e-06	ci right 9.409920e-06	k: 5	n:1240000
ZNF479   1240000 perm   744 sec   (1666 perm/sec)   p_kst 4.032258e-06   p_cons 9.999702e-01   p_joint 1.129032e-05

Joint ci ratio: 1.012133e+00	ci left: 6.123157e-06	ci right 1.879163e-05	k: 14	n:1250000
Cons ci ratio: 1.933186e-05	ci left: 9.999592e-01	ci right 9.999792e-01	k: 1249963	n:1250000
KS ci ratio: 1.600329e+00	ci left: 1.298790e-06	ci right 9.334641e-06	k: 5	n:1250000
ZNF479   1250000 perm   755 sec   (1656 perm/sec)   p_kst 4.000000e-06   p_cons 9.999704e-01   p_joint 1.120000e-05

Joint ci ratio: 9.799934e-01	ci left: 6.663020e-06	ci right 1.963502e-05	k: 15	n:1260000
Cons ci ratio: 1.942914e-05	ci left: 9.999586e-01	ci right 9.999787e-01	k: 1259962	n:1260000
KS ci ratio: 1.600329e+00	ci left: 1.288482e-06	ci right 9.260557e-06	k: 5	n:1260000
ZNF479   1260000 perm   765 sec   (1646 perm/sec)   p_kst 3.968254e-06   p_cons 9.999698e-01   p_joint 1.190476e-05

Joint ci ratio: 9.799934e-01	ci left: 6.610555e-06	ci right 1.948041e-05	k: 15	n:1270000
Cons ci ratio: 1.927616e-05	ci left: 9.999589e-01	ci right 9.999788e-01	k: 1269962	n:1270000
KS ci ratio: 1.600329e+00	ci left: 1.278337e-06	ci right 9.187639e-06	k: 5	n:1270000
ZNF479   1270000 perm   776 sec   (1637 perm/sec)   p_kst 3.937008e-06   p_cons 9.999701e-01   p_joint 1.181102e-05

Joint ci ratio: 9.799935e-01	ci left: 6.558910e-06	ci right 1.932822e-05	k: 15	n:1280000
Cons ci ratio: 1.912556e-05	ci left: 9.999593e-01	ci right 9.999790e-01	k: 1279962	n:1280000
KS ci ratio: 1.600329e+00	ci left: 1.268350e-06	ci right 9.115861e-06	k: 5	n:1280000
ZNF479   1280000 perm   787 sec   (1627 perm/sec)   p_kst 3.906250e-06   p_cons 9.999703e-01   p_joint 1.171875e-05

Joint ci ratio: 9.799935e-01	ci left: 6.508065e-06	ci right 1.917839e-05	k: 15	n:1290000
Cons ci ratio: 1.897730e-05	ci left: 9.999596e-01	ci right 9.999792e-01	k: 1289962	n:1290000
KS ci ratio: 1.600329e+00	ci left: 1.258518e-06	ci right 9.045195e-06	k: 5	n:1290000
ZNF479   1290000 perm   797 sec   (1618 perm/sec)   p_kst 3.875969e-06   p_cons 9.999705e-01   p_joint 1.162791e-05

Joint ci ratio: 9.799936e-01	ci left: 6.458003e-06	ci right 1.903087e-05	k: 15	n:1300000
Cons ci ratio: 1.883132e-05	ci left: 9.999599e-01	ci right 9.999793e-01	k: 1299962	n:1300000
KS ci ratio: 1.600329e+00	ci left: 1.248837e-06	ci right 8.975617e-06	k: 5	n:1300000
ZNF479   1300000 perm   808 sec   (1609 perm/sec)   p_kst 3.846154e-06   p_cons 9.999708e-01   p_joint 1.153846e-05

Joint ci ratio: 9.799936e-01	ci left: 6.408705e-06	ci right 1.888559e-05	k: 15	n:1310000
Cons ci ratio: 1.892564e-05	ci left: 9.999593e-01	ci right 9.999788e-01	k: 1309961	n:1310000
KS ci ratio: 1.600329e+00	ci left: 1.239304e-06	ci right 8.907101e-06	k: 5	n:1310000
ZNF479   1310000 perm   819 sec   (1600 perm/sec)   p_kst 3.816794e-06   p_cons 9.999702e-01   p_joint 1.145038e-05

Joint ci ratio: 9.799937e-01	ci left: 6.360155e-06	ci right 1.874252e-05	k: 15	n:1320000
Cons ci ratio: 1.878226e-05	ci left: 9.999596e-01	ci right 9.999790e-01	k: 1319961	n:1320000
KS ci ratio: 1.600329e+00	ci left: 1.229915e-06	ci right 8.839623e-06	k: 5	n:1320000
ZNF479   1320000 perm   830 sec   (1590 perm/sec)   p_kst 3.787879e-06   p_cons 9.999705e-01   p_joint 1.136364e-05

Joint ci ratio: 9.799937e-01	ci left: 6.312334e-06	ci right 1.860160e-05	k: 15	n:1330000
Cons ci ratio: 1.864104e-05	ci left: 9.999599e-01	ci right 9.999791e-01	k: 1329961	n:1330000
KS ci ratio: 1.600329e+00	ci left: 1.220668e-06	ci right 8.773160e-06	k: 5	n:1330000
ZNF479   1330000 perm   841 sec   (1581 perm/sec)   p_kst 3.759398e-06   p_cons 9.999707e-01   p_joint 1.127820e-05

Joint ci ratio: 9.799938e-01	ci left: 6.265227e-06	ci right 1.846278e-05	k: 15	n:1340000
Cons ci ratio: 1.850193e-05	ci left: 9.999602e-01	ci right 9.999793e-01	k: 1339961	n:1340000
KS ci ratio: 1.600329e+00	ci left: 1.211558e-06	ci right 8.707689e-06	k: 5	n:1340000
ZNF479   1340000 perm   852 sec   (1572 perm/sec)   p_kst 3.731343e-06   p_cons 9.999709e-01   p_joint 1.119403e-05

Joint ci ratio: 1.131601e+00	ci left: 4.067533e-06	ci right 1.457924e-05	k: 11	n:1350000
Cons ci ratio: 1.859302e-05	ci left: 9.999597e-01	ci right 9.999788e-01	k: 1349960	n:1350000
KS ci ratio: 1.600329e+00	ci left: 1.202584e-06	ci right 8.643188e-06	k: 5	n:1350000
ZNF479   1350000 perm   864 sec   (1563 perm/sec)   p_kst 3.703704e-06   p_cons 9.999704e-01   p_joint 8.148148e-06

Joint ci ratio: 1.131601e+00	ci left: 4.037625e-06	ci right 1.447204e-05	k: 11	n:1360000
Cons ci ratio: 1.845631e-05	ci left: 9.999599e-01	ci right 9.999790e-01	k: 1359960	n:1360000
KS ci ratio: 1.600329e+00	ci left: 1.193741e-06	ci right 8.579635e-06	k: 5	n:1360000
ZNF479   1360000 perm   875 sec   (1554 perm/sec)   p_kst 3.676471e-06   p_cons 9.999706e-01   p_joint 8.088235e-06

Joint ci ratio: 1.131601e+00	ci left: 4.008153e-06	ci right 1.436641e-05	k: 11	n:1370000
Cons ci ratio: 1.832159e-05	ci left: 9.999602e-01	ci right 9.999791e-01	k: 1369960	n:1370000
KS ci ratio: 1.600329e+00	ci left: 1.185028e-06	ci right 8.517010e-06	k: 5	n:1370000
ZNF479   1370000 perm   886 sec   (1546 perm/sec)   p_kst 3.649635e-06   p_cons 9.999708e-01   p_joint 8.029197e-06

Joint ci ratio: 1.131601e+00	ci left: 3.979108e-06	ci right 1.426230e-05	k: 11	n:1380000
Cons ci ratio: 1.818882e-05	ci left: 9.999605e-01	ci right 9.999793e-01	k: 1379960	n:1380000
KS ci ratio: 1.600329e+00	ci left: 1.176440e-06	ci right 8.455293e-06	k: 5	n:1380000
ZNF479   1380000 perm   898 sec   (1537 perm/sec)   p_kst 3.623188e-06   p_cons 9.999710e-01   p_joint 7.971014e-06

Joint ci ratio: 1.131601e+00	ci left: 3.950481e-06	ci right 1.415970e-05	k: 11	n:1390000
Cons ci ratio: 1.827686e-05	ci left: 9.999600e-01	ci right 9.999788e-01	k: 1389959	n:1390000
KS ci ratio: 1.600329e+00	ci left: 1.167977e-06	ci right 8.394463e-06	k: 5	n:1390000
ZNF479   1390000 perm   909 sec   (1529 perm/sec)   p_kst 3.597122e-06   p_cons 9.999705e-01   p_joint 7.913669e-06

Joint ci ratio: 1.131601e+00	ci left: 3.922264e-06	ci right 1.405856e-05	k: 11	n:1400000
Cons ci ratio: 1.814631e-05	ci left: 9.999603e-01	ci right 9.999790e-01	k: 1399959	n:1400000
KS ci ratio: 1.600329e+00	ci left: 1.159634e-06	ci right 8.334503e-06	k: 5	n:1400000
ZNF479   1400000 perm   921 sec   (1521 perm/sec)   p_kst 3.571429e-06   p_cons 9.999707e-01   p_joint 7.857143e-06

Joint ci ratio: 1.131601e+00	ci left: 3.894446e-06	ci right 1.395885e-05	k: 11	n:1410000
Cons ci ratio: 1.801761e-05	ci left: 9.999606e-01	ci right 9.999791e-01	k: 1409959	n:1410000
KS ci ratio: 1.600329e+00	ci left: 1.151410e-06	ci right 8.275393e-06	k: 5	n:1410000
ZNF479   1410000 perm   932 sec   (1512 perm/sec)   p_kst 3.546099e-06   p_cons 9.999709e-01   p_joint 7.801418e-06

Joint ci ratio: 1.131601e+00	ci left: 3.867020e-06	ci right 1.386055e-05	k: 11	n:1420000
Cons ci ratio: 1.789073e-05	ci left: 9.999608e-01	ci right 9.999793e-01	k: 1419959	n:1420000
KS ci ratio: 1.600329e+00	ci left: 1.143301e-06	ci right 8.217116e-06	k: 5	n:1420000
ZNF479   1420000 perm   944 sec   (1504 perm/sec)   p_kst 3.521127e-06   p_cons 9.999711e-01   p_joint 7.746479e-06

Joint ci ratio: 1.131601e+00	ci left: 3.839978e-06	ci right 1.376362e-05	k: 11	n:1430000
Cons ci ratio: 1.797587e-05	ci left: 9.999603e-01	ci right 9.999788e-01	k: 1429958	n:1430000
KS ci ratio: 1.600329e+00	ci left: 1.135306e-06	ci right 8.159654e-06	k: 5	n:1430000
ZNF479   1430000 perm   956 sec   (1496 perm/sec)   p_kst 3.496503e-06   p_cons 9.999706e-01   p_joint 7.692308e-06

Joint ci ratio: 1.131601e+00	ci left: 3.813312e-06	ci right 1.366804e-05	k: 11	n:1440000
Cons ci ratio: 1.785104e-05	ci left: 9.999606e-01	ci right 9.999790e-01	k: 1439958	n:1440000
KS ci ratio: 1.600329e+00	ci left: 1.127422e-06	ci right 8.102990e-06	k: 5	n:1440000
ZNF479   1440000 perm   968 sec   (1487 perm/sec)   p_kst 3.472222e-06   p_cons 9.999708e-01   p_joint 7.638889e-06

Joint ci ratio: 1.131601e+00	ci left: 3.787013e-06	ci right 1.357378e-05	k: 11	n:1450000
Cons ci ratio: 1.772793e-05	ci left: 9.999608e-01	ci right 9.999791e-01	k: 1449958	n:1450000
KS ci ratio: 1.600329e+00	ci left: 1.119647e-06	ci right 8.047107e-06	k: 5	n:1450000
ZNF479   1450000 perm   980 sec   (1479 perm/sec)   p_kst 3.448276e-06   p_cons 9.999710e-01   p_joint 7.586207e-06

Joint ci ratio: 1.131601e+00	ci left: 3.761075e-06	ci right 1.348081e-05	k: 11	n:1460000
Cons ci ratio: 1.760650e-05	ci left: 9.999611e-01	ci right 9.999793e-01	k: 1459958	n:1460000
KS ci ratio: 1.600329e+00	ci left: 1.111978e-06	ci right 7.991990e-06	k: 5	n:1460000
ZNF479   1460000 perm   992 sec   (1471 perm/sec)   p_kst 3.424658e-06   p_cons 9.999712e-01   p_joint 7.534247e-06

Joint ci ratio: 1.131602e+00	ci left: 3.735489e-06	ci right 1.338910e-05	k: 11	n:1470000
Cons ci ratio: 1.748673e-05	ci left: 9.999614e-01	ci right 9.999794e-01	k: 1469958	n:1470000
KS ci ratio: 1.600329e+00	ci left: 1.104413e-06	ci right 7.937623e-06	k: 5	n:1470000
ZNF479   1470000 perm   1004 sec   (1464 perm/sec)   p_kst 3.401361e-06   p_cons 9.999714e-01   p_joint 7.482993e-06

Joint ci ratio: 1.131602e+00	ci left: 3.710249e-06	ci right 1.329864e-05	k: 11	n:1480000
Cons ci ratio: 1.736857e-05	ci left: 9.999616e-01	ci right 9.999795e-01	k: 1479958	n:1480000
KS ci ratio: 1.600330e+00	ci left: 1.096951e-06	ci right 7.883990e-06	k: 5	n:1480000
ZNF479   1480000 perm   1016 sec   (1456 perm/sec)   p_kst 3.378378e-06   p_cons 9.999716e-01   p_joint 7.432432e-06

Joint ci ratio: 1.131602e+00	ci left: 3.685348e-06	ci right 1.320938e-05	k: 11	n:1490000
Cons ci ratio: 1.725200e-05	ci left: 9.999619e-01	ci right 9.999797e-01	k: 1489958	n:1490000
KS ci ratio: 1.600330e+00	ci left: 1.089589e-06	ci right 7.831078e-06	k: 5	n:1490000
ZNF479   1490000 perm   1028 sec   (1449 perm/sec)   p_kst 3.355705e-06   p_cons 9.999718e-01   p_joint 7.382550e-06

Joint ci ratio: 1.131602e+00	ci left: 3.660779e-06	ci right 1.312132e-05	k: 11	n:1500000
Cons ci ratio: 1.713699e-05	ci left: 9.999622e-01	ci right 9.999798e-01	k: 1499958	n:1500000
KS ci ratio: 1.600330e+00	ci left: 1.082325e-06	ci right 7.778871e-06	k: 5	n:1500000
ZNF479   1500000 perm   1041 sec   (1441 perm/sec)   p_kst 3.333333e-06   p_cons 9.999720e-01   p_joint 7.333333e-06

Joint ci ratio: 1.131602e+00	ci left: 3.636535e-06	ci right 1.303443e-05	k: 11	n:1510000
Cons ci ratio: 1.702350e-05	ci left: 9.999624e-01	ci right 9.999800e-01	k: 1509958	n:1510000
KS ci ratio: 1.600330e+00	ci left: 1.075157e-06	ci right 7.727355e-06	k: 5	n:1510000
ZNF479   1510000 perm   1053 sec   (1434 perm/sec)   p_kst 3.311258e-06   p_cons 9.999722e-01   p_joint 7.284768e-06

Joint ci ratio: 1.131602e+00	ci left: 3.612611e-06	ci right 1.294867e-05	k: 11	n:1520000
Cons ci ratio: 1.691150e-05	ci left: 9.999627e-01	ci right 9.999801e-01	k: 1519958	n:1520000
KS ci ratio: 1.600330e+00	ci left: 1.068084e-06	ci right 7.676517e-06	k: 5	n:1520000
ZNF479   1520000 perm   1065 sec   (1427 perm/sec)   p_kst 3.289474e-06   p_cons 9.999724e-01   p_joint 7.236842e-06

Joint ci ratio: 1.131602e+00	ci left: 3.588999e-06	ci right 1.286404e-05	k: 11	n:1530000
Cons ci ratio: 1.680097e-05	ci left: 9.999629e-01	ci right 9.999802e-01	k: 1529958	n:1530000
KS ci ratio: 1.600330e+00	ci left: 1.061103e-06	ci right 7.626344e-06	k: 5	n:1530000
ZNF479   1530000 perm   1078 sec   (1419 perm/sec)   p_kst 3.267974e-06   p_cons 9.999725e-01   p_joint 7.189542e-06

Joint ci ratio: 1.131602e+00	ci left: 3.565694e-06	ci right 1.278051e-05	k: 11	n:1540000
Cons ci ratio: 1.669187e-05	ci left: 9.999631e-01	ci right 9.999803e-01	k: 1539958	n:1540000
KS ci ratio: 1.600330e+00	ci left: 1.054213e-06	ci right 7.576823e-06	k: 5	n:1540000
ZNF479   1540000 perm   1090 sec   (1412 perm/sec)   p_kst 3.246753e-06   p_cons 9.999727e-01   p_joint 7.142857e-06

Joint ci ratio: 1.131602e+00	ci left: 3.542689e-06	ci right 1.269805e-05	k: 11	n:1550000
Cons ci ratio: 1.658418e-05	ci left: 9.999634e-01	ci right 9.999805e-01	k: 1549958	n:1550000
KS ci ratio: 1.600330e+00	ci left: 1.047411e-06	ci right 7.527940e-06	k: 5	n:1550000
ZNF479   1550000 perm   1103 sec   (1405 perm/sec)   p_kst 3.225806e-06   p_cons 9.999729e-01   p_joint 7.096774e-06

Joint ci ratio: 1.131602e+00	ci left: 3.519980e-06	ci right 1.261666e-05	k: 11	n:1560000
Cons ci ratio: 1.647787e-05	ci left: 9.999636e-01	ci right 9.999806e-01	k: 1559958	n:1560000
KS ci ratio: 1.600330e+00	ci left: 1.040697e-06	ci right 7.479684e-06	k: 5	n:1560000
ZNF479   1560000 perm   1116 sec   (1398 perm/sec)   p_kst 3.205128e-06   p_cons 9.999731e-01   p_joint 7.051282e-06

Joint ci ratio: 1.131602e+00	ci left: 3.497559e-06	ci right 1.253630e-05	k: 11	n:1570000
Cons ci ratio: 1.637291e-05	ci left: 9.999638e-01	ci right 9.999807e-01	k: 1569958	n:1570000
KS ci ratio: 1.600330e+00	ci left: 1.034069e-06	ci right 7.432043e-06	k: 5	n:1570000
ZNF479   1570000 perm   1129 sec   (1390 perm/sec)   p_kst 3.184713e-06   p_cons 9.999732e-01   p_joint 7.006369e-06

Joint ci ratio: 1.131602e+00	ci left: 3.475423e-06	ci right 1.245695e-05	k: 11	n:1580000
Cons ci ratio: 1.626928e-05	ci left: 9.999641e-01	ci right 9.999808e-01	k: 1579958	n:1580000
KS ci ratio: 1.600330e+00	ci left: 1.027524e-06	ci right 7.385005e-06	k: 5	n:1580000
ZNF479   1580000 perm   1142 sec   (1383 perm/sec)   p_kst 3.164557e-06   p_cons 9.999734e-01   p_joint 6.962025e-06

Joint ci ratio: 1.047659e+00	ci left: 4.353436e-06	ci right 1.398134e-05	k: 13	n:1590000
Cons ci ratio: 1.616696e-05	ci left: 9.999643e-01	ci right 9.999810e-01	k: 1589958	n:1590000
KS ci ratio: 1.481617e+00	ci left: 1.384840e-06	ci right 8.213487e-06	k: 6	n:1590000
ZNF479   1590000 perm   1155 sec   (1376 perm/sec)   p_kst 3.773585e-06   p_cons 9.999736e-01   p_joint 8.176101e-06

Joint ci ratio: 1.047659e+00	ci left: 4.326227e-06	ci right 1.389396e-05	k: 13	n:1600000
Cons ci ratio: 1.606592e-05	ci left: 9.999645e-01	ci right 9.999811e-01	k: 1599958	n:1600000
KS ci ratio: 1.481617e+00	ci left: 1.376185e-06	ci right 8.162153e-06	k: 6	n:1600000
ZNF479   1600000 perm   1168 sec   (1370 perm/sec)   p_kst 3.750000e-06   p_cons 9.999737e-01   p_joint 8.125000e-06

Joint ci ratio: 1.047659e+00	ci left: 4.299356e-06	ci right 1.380766e-05	k: 13	n:1610000
Cons ci ratio: 1.615072e-05	ci left: 9.999640e-01	ci right 9.999807e-01	k: 1609957	n:1610000
KS ci ratio: 1.481617e+00	ci left: 1.367637e-06	ci right 8.111457e-06	k: 6	n:1610000
ZNF479   1610000 perm   1181 sec   (1363 perm/sec)   p_kst 3.726708e-06   p_cons 9.999733e-01   p_joint 8.074534e-06

Joint ci ratio: 1.047659e+00	ci left: 4.272817e-06	ci right 1.372243e-05	k: 13	n:1620000
Cons ci ratio: 1.623240e-05	ci left: 9.999635e-01	ci right 9.999803e-01	k: 1619956	n:1620000
KS ci ratio: 1.481617e+00	ci left: 1.359195e-06	ci right 8.061386e-06	k: 6	n:1620000
ZNF479   1620000 perm   1194 sec   (1356 perm/sec)   p_kst 3.703704e-06   p_cons 9.999728e-01   p_joint 8.024691e-06

Joint ci ratio: 1.047659e+00	ci left: 4.246603e-06	ci right 1.363824e-05	k: 13	n:1630000
Cons ci ratio: 1.613281e-05	ci left: 9.999638e-01	ci right 9.999804e-01	k: 1629956	n:1630000
KS ci ratio: 1.481617e+00	ci left: 1.350857e-06	ci right 8.011930e-06	k: 6	n:1630000
ZNF479   1630000 perm   1207 sec   (1350 perm/sec)   p_kst 3.680982e-06   p_cons 9.999730e-01   p_joint 7.975460e-06

Joint ci ratio: 1.047659e+00	ci left: 4.220709e-06	ci right 1.355508e-05	k: 13	n:1640000
Cons ci ratio: 1.603444e-05	ci left: 9.999640e-01	ci right 9.999805e-01	k: 1639956	n:1640000
KS ci ratio: 1.481617e+00	ci left: 1.342620e-06	ci right 7.963077e-06	k: 6	n:1640000
ZNF479   1640000 perm   1221 sec   (1343 perm/sec)   p_kst 3.658537e-06   p_cons 9.999732e-01   p_joint 7.926829e-06

Joint ci ratio: 1.047659e+00	ci left: 4.195129e-06	ci right 1.347293e-05	k: 13	n:1650000
Cons ci ratio: 1.593726e-05	ci left: 9.999642e-01	ci right 9.999806e-01	k: 1649956	n:1650000
KS ci ratio: 1.481617e+00	ci left: 1.334482e-06	ci right 7.914816e-06	k: 6	n:1650000
ZNF479   1650000 perm   1235 sec   (1337 perm/sec)   p_kst 3.636364e-06   p_cons 9.999733e-01   p_joint 7.878788e-06

Joint ci ratio: 1.047659e+00	ci left: 4.169857e-06	ci right 1.339177e-05	k: 13	n:1660000
Cons ci ratio: 1.601630e-05	ci left: 9.999637e-01	ci right 9.999802e-01	k: 1659955	n:1660000
KS ci ratio: 1.481617e+00	ci left: 1.326443e-06	ci right 7.867136e-06	k: 6	n:1660000
ZNF479   1660000 perm   1248 sec   (1330 perm/sec)   p_kst 3.614458e-06   p_cons 9.999729e-01   p_joint 7.831325e-06

Joint ci ratio: 1.047659e+00	ci left: 4.144888e-06	ci right 1.331158e-05	k: 13	n:1670000
Cons ci ratio: 1.592040e-05	ci left: 9.999639e-01	ci right 9.999803e-01	k: 1669955	n:1670000
KS ci ratio: 1.481617e+00	ci left: 1.318501e-06	ci right 7.820028e-06	k: 6	n:1670000
ZNF479   1670000 perm   1262 sec   (1324 perm/sec)   p_kst 3.592814e-06   p_cons 9.999731e-01   p_joint 7.784431e-06

Joint ci ratio: 1.087208e+00	ci left: 3.690824e-06	ci right 1.247710e-05	k: 12	n:1680000
Cons ci ratio: 1.582563e-05	ci left: 9.999642e-01	ci right 9.999805e-01	k: 1679955	n:1680000
KS ci ratio: 1.481617e+00	ci left: 1.310652e-06	ci right 7.773480e-06	k: 6	n:1680000
ZNF479   1680000 perm   1275 sec   (1317 perm/sec)   p_kst 3.571429e-06   p_cons 9.999732e-01   p_joint 7.142857e-06

Joint ci ratio: 1.087208e+00	ci left: 3.668985e-06	ci right 1.240327e-05	k: 12	n:1690000
Cons ci ratio: 1.573199e-05	ci left: 9.999644e-01	ci right 9.999806e-01	k: 1689955	n:1690000
KS ci ratio: 1.481617e+00	ci left: 1.302897e-06	ci right 7.727483e-06	k: 6	n:1690000
ZNF479   1690000 perm   1289 sec   (1311 perm/sec)   p_kst 3.550296e-06   p_cons 9.999734e-01   p_joint 7.100592e-06

Joint ci ratio: 1.087208e+00	ci left: 3.647402e-06	ci right 1.233031e-05	k: 12	n:1700000
Cons ci ratio: 1.563944e-05	ci left: 9.999646e-01	ci right 9.999807e-01	k: 1699955	n:1700000
KS ci ratio: 1.481617e+00	ci left: 1.295233e-06	ci right 7.682028e-06	k: 6	n:1700000
ZNF479   1700000 perm   1303 sec   (1305 perm/sec)   p_kst 3.529412e-06   p_cons 9.999735e-01   p_joint 7.058824e-06

Joint ci ratio: 1.047659e+00	ci left: 4.047931e-06	ci right 1.300020e-05	k: 13	n:1710000
Cons ci ratio: 1.554798e-05	ci left: 9.999648e-01	ci right 9.999808e-01	k: 1709955	n:1710000
KS ci ratio: 1.481617e+00	ci left: 1.287659e-06	ci right 7.637104e-06	k: 6	n:1710000
ZNF479   1710000 perm   1317 sec   (1298 perm/sec)   p_kst 3.508772e-06   p_cons 9.999737e-01   p_joint 7.602339e-06

Joint ci ratio: 1.047659e+00	ci left: 4.024397e-06	ci right 1.292461e-05	k: 13	n:1720000
Cons ci ratio: 1.545759e-05	ci left: 9.999650e-01	ci right 9.999809e-01	k: 1719955	n:1720000
KS ci ratio: 1.481617e+00	ci left: 1.280172e-06	ci right 7.592702e-06	k: 6	n:1720000
ZNF479   1720000 perm   1332 sec   (1292 perm/sec)   p_kst 3.488372e-06   p_cons 9.999738e-01   p_joint 7.558140e-06

Joint ci ratio: 1.047660e+00	ci left: 4.001134e-06	ci right 1.284991e-05	k: 13	n:1730000
Cons ci ratio: 1.536824e-05	ci left: 9.999652e-01	ci right 9.999810e-01	k: 1729955	n:1730000
KS ci ratio: 1.481617e+00	ci left: 1.272772e-06	ci right 7.548814e-06	k: 6	n:1730000
ZNF479   1730000 perm   1346 sec   (1285 perm/sec)   p_kst 3.468208e-06   p_cons 9.999740e-01   p_joint 7.514451e-06

Joint ci ratio: 1.047660e+00	ci left: 3.978139e-06	ci right 1.277606e-05	k: 13	n:1740000
Cons ci ratio: 1.527991e-05	ci left: 9.999654e-01	ci right 9.999811e-01	k: 1739955	n:1740000
KS ci ratio: 1.481617e+00	ci left: 1.265457e-06	ci right 7.505430e-06	k: 6	n:1740000
ZNF479   1740000 perm   1361 sec   (1279 perm/sec)   p_kst 3.448276e-06   p_cons 9.999741e-01   p_joint 7.471264e-06

Joint ci ratio: 1.047660e+00	ci left: 3.955407e-06	ci right 1.270305e-05	k: 13	n:1750000
Cons ci ratio: 1.519260e-05	ci left: 9.999656e-01	ci right 9.999812e-01	k: 1749955	n:1750000
KS ci ratio: 1.481617e+00	ci left: 1.258226e-06	ci right 7.462542e-06	k: 6	n:1750000
ZNF479   1750000 perm   1375 sec   (1273 perm/sec)   p_kst 3.428571e-06   p_cons 9.999743e-01   p_joint 7.428571e-06

Joint ci ratio: 1.047660e+00	ci left: 3.932933e-06	ci right 1.263087e-05	k: 13	n:1760000
Cons ci ratio: 1.510627e-05	ci left: 9.999658e-01	ci right 9.999814e-01	k: 1759955	n:1760000
KS ci ratio: 1.481617e+00	ci left: 1.251077e-06	ci right 7.420141e-06	k: 6	n:1760000
ZNF479   1760000 perm   1389 sec   (1267 perm/sec)   p_kst 3.409091e-06   p_cons 9.999744e-01   p_joint 7.386364e-06

Joint ci ratio: 1.047660e+00	ci left: 3.910713e-06	ci right 1.255951e-05	k: 13	n:1770000
Cons ci ratio: 1.502093e-05	ci left: 9.999660e-01	ci right 9.999815e-01	k: 1769955	n:1770000
KS ci ratio: 1.481617e+00	ci left: 1.244009e-06	ci right 7.378219e-06	k: 6	n:1770000
ZNF479   1770000 perm   1403 sec   (1262 perm/sec)   p_kst 3.389831e-06   p_cons 9.999746e-01   p_joint 7.344633e-06

Joint ci ratio: 1.012135e+00	ci left: 4.299967e-06	ci right 1.319638e-05	k: 14	n:1780000
Cons ci ratio: 1.493654e-05	ci left: 9.999662e-01	ci right 9.999816e-01	k: 1779955	n:1780000
KS ci ratio: 1.481617e+00	ci left: 1.237020e-06	ci right 7.336769e-06	k: 6	n:1780000
ZNF479   1780000 perm   1417 sec   (1256 perm/sec)   p_kst 3.370787e-06   p_cons 9.999747e-01   p_joint 7.865169e-06

Joint ci ratio: 9.799953e-01	ci left: 4.690167e-06	ci right 1.382131e-05	k: 15	n:1790000
Cons ci ratio: 1.501368e-05	ci left: 9.999657e-01	ci right 9.999812e-01	k: 1789954	n:1790000
KS ci ratio: 1.481617e+00	ci left: 1.230109e-06	ci right 7.295781e-06	k: 6	n:1790000
ZNF479   1790000 perm   1435 sec   (1247 perm/sec)   p_kst 3.351955e-06   p_cons 9.999743e-01   p_joint 8.379888e-06

Joint ci ratio: 9.799954e-01	ci left: 4.664111e-06	ci right 1.374453e-05	k: 15	n:1800000
Cons ci ratio: 1.493027e-05	ci left: 9.999659e-01	ci right 9.999813e-01	k: 1799954	n:1800000
KS ci ratio: 1.481617e+00	ci left: 1.223276e-06	ci right 7.255249e-06	k: 6	n:1800000
ZNF479   1800000 perm   1450 sec   (1242 perm/sec)   p_kst 3.333333e-06   p_cons 9.999744e-01   p_joint 8.333333e-06

Joint ci ratio: 1.012135e+00	ci left: 4.228697e-06	ci right 1.297766e-05	k: 14	n:1810000
Cons ci ratio: 1.484778e-05	ci left: 9.999661e-01	ci right 9.999814e-01	k: 1809954	n:1810000
KS ci ratio: 1.481617e+00	ci left: 1.216517e-06	ci right 7.215165e-06	k: 6	n:1810000
ZNF479   1810000 perm   1464 sec   (1236 perm/sec)   p_kst 3.314917e-06   p_cons 9.999746e-01   p_joint 7.734807e-06

Joint ci ratio: 1.012135e+00	ci left: 4.205462e-06	ci right 1.290635e-05	k: 14	n:1820000
Cons ci ratio: 1.492246e-05	ci left: 9.999657e-01	ci right 9.999810e-01	k: 1819953	n:1820000
KS ci ratio: 1.481617e+00	ci left: 1.209833e-06	ci right 7.175521e-06	k: 6	n:1820000
ZNF479   1820000 perm   1479 sec   (1231 perm/sec)   p_kst 3.296703e-06   p_cons 9.999742e-01   p_joint 7.692308e-06

Joint ci ratio: 9.799954e-01	ci left: 4.587650e-06	ci right 1.351921e-05	k: 15	n:1830000
Cons ci ratio: 1.484092e-05	ci left: 9.999658e-01	ci right 9.999811e-01	k: 1829953	n:1830000
KS ci ratio: 1.385926e+00	ci left: 1.537905e-06	ci right 7.881227e-06	k: 7	n:1830000
ZNF479   1830000 perm   1494 sec   (1225 perm/sec)   p_kst 3.825137e-06   p_cons 9.999743e-01   p_joint 8.196721e-06

Joint ci ratio: 9.799955e-01	ci left: 4.562717e-06	ci right 1.344574e-05	k: 15	n:1840000
Cons ci ratio: 1.476026e-05	ci left: 9.999660e-01	ci right 9.999812e-01	k: 1839953	n:1840000
KS ci ratio: 1.385926e+00	ci left: 1.529546e-06	ci right 7.838395e-06	k: 7	n:1840000
ZNF479   1840000 perm   1511 sec   (1218 perm/sec)   p_kst 3.804348e-06   p_cons 9.999745e-01   p_joint 8.152174e-06

Joint ci ratio: 9.799955e-01	ci left: 4.538053e-06	ci right 1.337306e-05	k: 15	n:1850000
Cons ci ratio: 1.468047e-05	ci left: 9.999662e-01	ci right 9.999813e-01	k: 1849953	n:1850000
KS ci ratio: 1.385926e+00	ci left: 1.521279e-06	ci right 7.796025e-06	k: 7	n:1850000
ZNF479   1850000 perm   1536 sec   (1204 perm/sec)   p_kst 3.783784e-06   p_cons 9.999746e-01   p_joint 8.108108e-06

Joint ci ratio: 9.799955e-01	ci left: 4.513655e-06	ci right 1.330116e-05	k: 15	n:1860000
Cons ci ratio: 1.475286e-05	ci left: 9.999658e-01	ci right 9.999810e-01	k: 1859952	n:1860000
KS ci ratio: 1.385926e+00	ci left: 1.513100e-06	ci right 7.754111e-06	k: 7	n:1860000
ZNF479   1860000 perm   1552 sec   (1199 perm/sec)   p_kst 3.763441e-06   p_cons 9.999742e-01   p_joint 8.064516e-06

Joint ci ratio: 9.799955e-01	ci left: 4.489518e-06	ci right 1.323003e-05	k: 15	n:1870000
Cons ci ratio: 1.467397e-05	ci left: 9.999660e-01	ci right 9.999811e-01	k: 1869952	n:1870000
KS ci ratio: 1.385926e+00	ci left: 1.505008e-06	ci right 7.712645e-06	k: 7	n:1870000
ZNF479   1870000 perm   1567 sec   (1194 perm/sec)   p_kst 3.743316e-06   p_cons 9.999743e-01   p_joint 8.021390e-06

Joint ci ratio: 9.799956e-01	ci left: 4.465638e-06	ci right 1.315966e-05	k: 15	n:1880000
Cons ci ratio: 1.474411e-05	ci left: 9.999655e-01	ci right 9.999807e-01	k: 1879951	n:1880000
KS ci ratio: 1.385926e+00	ci left: 1.497003e-06	ci right 7.671621e-06	k: 7	n:1880000
ZNF479   1880000 perm   1582 sec   (1188 perm/sec)   p_kst 3.723404e-06   p_cons 9.999739e-01   p_joint 7.978723e-06

Joint ci ratio: 9.799956e-01	ci left: 4.442010e-06	ci right 1.309003e-05	k: 15	n:1890000
Cons ci ratio: 1.466609e-05	ci left: 9.999657e-01	ci right 9.999808e-01	k: 1889951	n:1890000
KS ci ratio: 1.385926e+00	ci left: 1.489082e-06	ci right 7.631030e-06	k: 7	n:1890000
ZNF479   1890000 perm   1598 sec   (1183 perm/sec)   p_kst 3.703704e-06   p_cons 9.999741e-01   p_joint 7.936508e-06

Joint ci ratio: 9.799956e-01	ci left: 4.418631e-06	ci right 1.302113e-05	k: 15	n:1900000
Cons ci ratio: 1.458890e-05	ci left: 9.999659e-01	ci right 9.999809e-01	k: 1899951	n:1900000
KS ci ratio: 1.385926e+00	ci left: 1.481245e-06	ci right 7.590867e-06	k: 7	n:1900000
ZNF479   1900000 perm   1614 sec   (1177 perm/sec)   p_kst 3.684211e-06   p_cons 9.999742e-01   p_joint 7.894737e-06

Joint ci ratio: 9.799956e-01	ci left: 4.395497e-06	ci right 1.295296e-05	k: 15	n:1910000
Cons ci ratio: 1.451252e-05	ci left: 9.999661e-01	ci right 9.999810e-01	k: 1909951	n:1910000
KS ci ratio: 1.385926e+00	ci left: 1.473490e-06	ci right 7.551124e-06	k: 7	n:1910000
ZNF479   1910000 perm   1632 sec   (1170 perm/sec)   p_kst 3.664921e-06   p_cons 9.999743e-01   p_joint 7.853403e-06

Joint ci ratio: 9.799957e-01	ci left: 4.372603e-06	ci right 1.288550e-05	k: 15	n:1920000
Cons ci ratio: 1.458059e-05	ci left: 9.999657e-01	ci right 9.999807e-01	k: 1919950	n:1920000
KS ci ratio: 1.385926e+00	ci left: 1.465815e-06	ci right 7.511796e-06	k: 7	n:1920000
ZNF479   1920000 perm   1648 sec   (1165 perm/sec)   p_kst 3.645833e-06   p_cons 9.999740e-01   p_joint 7.812500e-06

Joint ci ratio: 9.507352e-01	ci left: 4.738547e-06	ci right 1.346266e-05	k: 16	n:1930000
Cons ci ratio: 1.478673e-05	ci left: 9.999647e-01	ci right 9.999799e-01	k: 1929948	n:1930000
KS ci ratio: 1.306663e+00	ci left: 1.789552e-06	ci right 8.167439e-06	k: 8	n:1930000
ZNF479   1930000 perm   1663 sec   (1160 perm/sec)   p_kst 4.145078e-06   p_cons 9.999731e-01   p_joint 8.290155e-06

Joint ci ratio: 9.507352e-01	ci left: 4.714122e-06	ci right 1.339326e-05	k: 16	n:1940000
Cons ci ratio: 1.471051e-05	ci left: 9.999649e-01	ci right 9.999800e-01	k: 1939948	n:1940000
KS ci ratio: 1.306663e+00	ci left: 1.780327e-06	ci right 8.125339e-06	k: 8	n:1940000
ZNF479   1940000 perm   1679 sec   (1156 perm/sec)   p_kst 4.123711e-06   p_cons 9.999732e-01   p_joint 8.247423e-06

Joint ci ratio: 9.507353e-01	ci left: 4.689947e-06	ci right 1.332458e-05	k: 16	n:1950000
Cons ci ratio: 1.463507e-05	ci left: 9.999650e-01	ci right 9.999801e-01	k: 1949948	n:1950000
KS ci ratio: 1.306663e+00	ci left: 1.771198e-06	ci right 8.083671e-06	k: 8	n:1950000
ZNF479   1950000 perm   1695 sec   (1151 perm/sec)   p_kst 4.102564e-06   p_cons 9.999733e-01   p_joint 8.205128e-06

Joint ci ratio: 9.507353e-01	ci left: 4.666018e-06	ci right 1.325660e-05	k: 16	n:1960000
Cons ci ratio: 1.469712e-05	ci left: 9.999646e-01	ci right 9.999797e-01	k: 1959947	n:1960000
KS ci ratio: 1.306663e+00	ci left: 1.762161e-06	ci right 8.042428e-06	k: 8	n:1960000
ZNF479   1960000 perm   1711 sec   (1146 perm/sec)   p_kst 4.081633e-06   p_cons 9.999730e-01   p_joint 8.163265e-06

Joint ci ratio: 9.507353e-01	ci left: 4.642333e-06	ci right 1.318931e-05	k: 16	n:1970000
Cons ci ratio: 1.462252e-05	ci left: 9.999648e-01	ci right 9.999798e-01	k: 1969947	n:1970000
KS ci ratio: 1.306663e+00	ci left: 1.753216e-06	ci right 8.001603e-06	k: 8	n:1970000
ZNF479   1970000 perm   1727 sec   (1141 perm/sec)   p_kst 4.060914e-06   p_cons 9.999731e-01   p_joint 8.121827e-06

Joint ci ratio: 9.507353e-01	ci left: 4.618887e-06	ci right 1.312269e-05	k: 16	n:1980000
Cons ci ratio: 1.454866e-05	ci left: 9.999650e-01	ci right 9.999799e-01	k: 1979947	n:1980000
KS ci ratio: 1.306663e+00	ci left: 1.744361e-06	ci right 7.961191e-06	k: 8	n:1980000
ZNF479   1980000 perm   1743 sec   (1136 perm/sec)   p_kst 4.040404e-06   p_cons 9.999732e-01   p_joint 8.080808e-06

Joint ci ratio: 9.507354e-01	ci left: 4.595676e-06	ci right 1.305675e-05	k: 16	n:1990000
Cons ci ratio: 1.447555e-05	ci left: 9.999652e-01	ci right 9.999800e-01	k: 1989947	n:1990000
KS ci ratio: 1.306663e+00	ci left: 1.735596e-06	ci right 7.921185e-06	k: 8	n:1990000
ZNF479   1990000 perm   1759 sec   (1131 perm/sec)   p_kst 4.020101e-06   p_cons 9.999734e-01   p_joint 8.040201e-06

Joint ci ratio: 9.507354e-01	ci left: 4.572698e-06	ci right 1.299147e-05	k: 16	n:2000000
Cons ci ratio: 1.453593e-05	ci left: 9.999648e-01	ci right 9.999797e-01	k: 1999946	n:2000000
KS ci ratio: 1.306663e+00	ci left: 1.726918e-06	ci right 7.881579e-06	k: 8	n:2000000
ZNF479   2000000 perm   1775 sec   (1127 perm/sec)   p_kst 4.000000e-06   p_cons 9.999730e-01   p_joint 8.000000e-06

Joint ci ratio: 9.507354e-01	ci left: 4.549948e-06	ci right 1.292683e-05	k: 16	n:2010000
Cons ci ratio: 1.446361e-05	ci left: 9.999649e-01	ci right 9.999798e-01	k: 2009946	n:2010000
KS ci ratio: 1.306663e+00	ci left: 1.718326e-06	ci right 7.842368e-06	k: 8	n:2010000
ZNF479   2010000 perm   1791 sec   (1122 perm/sec)   p_kst 3.980100e-06   p_cons 9.999731e-01   p_joint 7.960199e-06

Joint ci ratio: 9.507354e-01	ci left: 4.527424e-06	ci right 1.286284e-05	k: 16	n:2020000
Cons ci ratio: 1.439201e-05	ci left: 9.999651e-01	ci right 9.999799e-01	k: 2019946	n:2020000
KS ci ratio: 1.306663e+00	ci left: 1.709819e-06	ci right 7.803544e-06	k: 8	n:2020000
ZNF479   2020000 perm   1808 sec   (1118 perm/sec)   p_kst 3.960396e-06   p_cons 9.999733e-01   p_joint 7.920792e-06

Joint ci ratio: 9.507354e-01	ci left: 4.505121e-06	ci right 1.279947e-05	k: 16	n:2030000
Cons ci ratio: 1.445072e-05	ci left: 9.999647e-01	ci right 9.999796e-01	k: 2029945	n:2030000
KS ci ratio: 1.306663e+00	ci left: 1.701397e-06	ci right 7.765103e-06	k: 8	n:2030000
ZNF479   2030000 perm   1824 sec   (1113 perm/sec)   p_kst 3.940887e-06   p_cons 9.999729e-01   p_joint 7.881773e-06

Joint ci ratio: 9.239486e-01	ci left: 4.854481e-06	ci right 1.334244e-05	k: 17	n:2040000
Cons ci ratio: 1.450771e-05	ci left: 9.999644e-01	ci right 9.999793e-01	k: 2039944	n:2040000
KS ci ratio: 1.306663e+00	ci left: 1.693056e-06	ci right 7.727039e-06	k: 8	n:2040000
ZNF479   2040000 perm   1840 sec   (1109 perm/sec)   p_kst 3.921569e-06   p_cons 9.999725e-01   p_joint 8.333333e-06

Joint ci ratio: 9.239486e-01	ci left: 4.830801e-06	ci right 1.327736e-05	k: 17	n:2050000
Cons ci ratio: 1.443694e-05	ci left: 9.999645e-01	ci right 9.999794e-01	k: 2049944	n:2050000
KS ci ratio: 1.306663e+00	ci left: 1.684798e-06	ci right 7.689346e-06	k: 8	n:2050000
ZNF479   2050000 perm   1856 sec   (1105 perm/sec)   p_kst 3.902439e-06   p_cons 9.999727e-01   p_joint 8.292683e-06

Joint ci ratio: 9.239486e-01	ci left: 4.807350e-06	ci right 1.321290e-05	k: 17	n:2060000
Cons ci ratio: 1.436686e-05	ci left: 9.999647e-01	ci right 9.999795e-01	k: 2059944	n:2060000
KS ci ratio: 1.306663e+00	ci left: 1.676619e-06	ci right 7.652019e-06	k: 8	n:2060000
ZNF479   2060000 perm   1872 sec   (1100 perm/sec)   p_kst 3.883495e-06   p_cons 9.999728e-01   p_joint 8.252427e-06

Joint ci ratio: 9.239486e-01	ci left: 4.784126e-06	ci right 1.314907e-05	k: 17	n:2070000
Cons ci ratio: 1.442233e-05	ci left: 9.999643e-01	ci right 9.999791e-01	k: 2069943	n:2070000
KS ci ratio: 1.306664e+00	ci left: 1.668519e-06	ci right 7.615053e-06	k: 8	n:2070000
ZNF479   2070000 perm   1889 sec   (1096 perm/sec)   p_kst 3.864734e-06   p_cons 9.999725e-01   p_joint 8.212560e-06

Joint ci ratio: 9.239486e-01	ci left: 4.761125e-06	ci right 1.308586e-05	k: 17	n:2080000
Cons ci ratio: 1.435299e-05	ci left: 9.999645e-01	ci right 9.999792e-01	k: 2079943	n:2080000
KS ci ratio: 1.306664e+00	ci left: 1.660498e-06	ci right 7.578442e-06	k: 8	n:2080000
ZNF479   2080000 perm   1906 sec   (1092 perm/sec)   p_kst 3.846154e-06   p_cons 9.999726e-01   p_joint 8.173077e-06

Joint ci ratio: 9.799960e-01	ci left: 4.016937e-06	ci right 1.183740e-05	k: 15	n:2090000
Cons ci ratio: 1.440693e-05	ci left: 9.999641e-01	ci right 9.999789e-01	k: 2089942	n:2090000
KS ci ratio: 1.306664e+00	ci left: 1.652553e-06	ci right 7.542182e-06	k: 8	n:2090000
ZNF479   2090000 perm   1922 sec   (1087 perm/sec)   p_kst 3.827751e-06   p_cons 9.999722e-01   p_joint 7.177033e-06

Joint ci ratio: 9.799960e-01	ci left: 3.997808e-06	ci right 1.178103e-05	k: 15	n:2100000
Cons ci ratio: 1.433832e-05	ci left: 9.999643e-01	ci right 9.999790e-01	k: 2099942	n:2100000
KS ci ratio: 1.306664e+00	ci left: 1.644683e-06	ci right 7.506267e-06	k: 8	n:2100000
ZNF479   2100000 perm   1939 sec   (1083 perm/sec)   p_kst 3.809524e-06   p_cons 9.999724e-01   p_joint 7.142857e-06

Joint ci ratio: 9.799961e-01	ci left: 3.978861e-06	ci right 1.172520e-05	k: 15	n:2110000
Cons ci ratio: 1.439080e-05	ci left: 9.999639e-01	ci right 9.999787e-01	k: 2109941	n:2110000
KS ci ratio: 1.306664e+00	ci left: 1.636889e-06	ci right 7.470692e-06	k: 8	n:2110000
ZNF479   2110000 perm   1955 sec   (1079 perm/sec)   p_kst 3.791469e-06   p_cons 9.999720e-01   p_joint 7.109005e-06

Joint ci ratio: 1.012136e+00	ci left: 3.610349e-06	ci right 1.107999e-05	k: 14	n:2120000
Cons ci ratio: 1.432292e-05	ci left: 9.999641e-01	ci right 9.999788e-01	k: 2119941	n:2120000
KS ci ratio: 1.306664e+00	ci left: 1.629167e-06	ci right 7.435453e-06	k: 8	n:2120000
ZNF479   2120000 perm   1972 sec   (1075 perm/sec)   p_kst 3.773585e-06   p_cons 9.999722e-01   p_joint 6.603774e-06

Joint ci ratio: 1.012136e+00	ci left: 3.593399e-06	ci right 1.102797e-05	k: 14	n:2130000
Cons ci ratio: 1.425567e-05	ci left: 9.999643e-01	ci right 9.999789e-01	k: 2129941	n:2130000
KS ci ratio: 1.306664e+00	ci left: 1.621519e-06	ci right 7.400545e-06	k: 8	n:2130000
ZNF479   2130000 perm   1989 sec   (1071 perm/sec)   p_kst 3.755869e-06   p_cons 9.999723e-01   p_joint 6.572770e-06

Joint ci ratio: 1.012136e+00	ci left: 3.576607e-06	ci right 1.097643e-05	k: 14	n:2140000
Cons ci ratio: 1.418906e-05	ci left: 9.999644e-01	ci right 9.999790e-01	k: 2139941	n:2140000
KS ci ratio: 1.306664e+00	ci left: 1.613942e-06	ci right 7.365963e-06	k: 8	n:2140000
ZNF479   2140000 perm   2007 sec   (1067 perm/sec)   p_kst 3.738318e-06   p_cons 9.999724e-01   p_joint 6.542056e-06

Joint ci ratio: 1.012136e+00	ci left: 3.559972e-06	ci right 1.092538e-05	k: 14	n:2150000
Cons ci ratio: 1.412306e-05	ci left: 9.999646e-01	ci right 9.999791e-01	k: 2149941	n:2150000
KS ci ratio: 1.306664e+00	ci left: 1.606435e-06	ci right 7.331703e-06	k: 8	n:2150000
ZNF479   2150000 perm   2024 sec   (1062 perm/sec)   p_kst 3.720930e-06   p_cons 9.999726e-01   p_joint 6.511628e-06

Joint ci ratio: 1.012136e+00	ci left: 3.543491e-06	ci right 1.087480e-05	k: 14	n:2160000
Cons ci ratio: 1.405767e-05	ci left: 9.999648e-01	ci right 9.999792e-01	k: 2159941	n:2160000
KS ci ratio: 1.306664e+00	ci left: 1.598998e-06	ci right 7.297760e-06	k: 8	n:2160000
ZNF479   2160000 perm   2043 sec   (1058 perm/sec)   p_kst 3.703704e-06   p_cons 9.999727e-01   p_joint 6.481481e-06

Joint ci ratio: 1.012136e+00	ci left: 3.527161e-06	ci right 1.082469e-05	k: 14	n:2170000
Cons ci ratio: 1.399289e-05	ci left: 9.999649e-01	ci right 9.999793e-01	k: 2169941	n:2170000
KS ci ratio: 1.306664e+00	ci left: 1.591629e-06	ci right 7.264130e-06	k: 8	n:2170000
ZNF479   2170000 perm   2066 sec   (1050 perm/sec)   p_kst 3.686636e-06   p_cons 9.999728e-01   p_joint 6.451613e-06

Joint ci ratio: 1.012136e+00	ci left: 3.510981e-06	ci right 1.077503e-05	k: 14	n:2180000
Cons ci ratio: 1.404430e-05	ci left: 9.999646e-01	ci right 9.999790e-01	k: 2179940	n:2180000
KS ci ratio: 1.306664e+00	ci left: 1.584328e-06	ci right 7.230808e-06	k: 8	n:2180000
ZNF479   2180000 perm   2084 sec   (1046 perm/sec)   p_kst 3.669725e-06   p_cons 9.999725e-01   p_joint 6.422018e-06

Joint ci ratio: 1.012136e+00	ci left: 3.494950e-06	ci right 1.072583e-05	k: 14	n:2190000
Cons ci ratio: 1.398017e-05	ci left: 9.999647e-01	ci right 9.999791e-01	k: 2189940	n:2190000
KS ci ratio: 1.306664e+00	ci left: 1.577094e-06	ci right 7.197791e-06	k: 8	n:2190000
ZNF479   2190000 perm   2101 sec   (1042 perm/sec)   p_kst 3.652968e-06   p_cons 9.999726e-01   p_joint 6.392694e-06

Joint ci ratio: 1.012136e+00	ci left: 3.479063e-06	ci right 1.067708e-05	k: 14	n:2200000
Cons ci ratio: 1.403023e-05	ci left: 9.999644e-01	ci right 9.999788e-01	k: 2199939	n:2200000
KS ci ratio: 1.306664e+00	ci left: 1.569925e-06	ci right 7.165073e-06	k: 8	n:2200000
ZNF479   2200000 perm   2125 sec   (1035 perm/sec)   p_kst 3.636364e-06   p_cons 9.999723e-01   p_joint 6.363636e-06

Joint ci ratio: 1.012136e+00	ci left: 3.463321e-06	ci right 1.062877e-05	k: 14	n:2210000
Cons ci ratio: 1.396675e-05	ci left: 9.999645e-01	ci right 9.999789e-01	k: 2209939	n:2210000
KS ci ratio: 1.306664e+00	ci left: 1.562821e-06	ci right 7.132652e-06	k: 8	n:2210000
ZNF479   2210000 perm   2146 sec   (1030 perm/sec)   p_kst 3.619910e-06   p_cons 9.999724e-01   p_joint 6.334842e-06

Joint ci ratio: 9.799962e-01	ci left: 3.781710e-06	ci right 1.114422e-05	k: 15	n:2220000
Cons ci ratio: 1.390383e-05	ci left: 9.999647e-01	ci right 9.999790e-01	k: 2219939	n:2220000
KS ci ratio: 1.306664e+00	ci left: 1.555782e-06	ci right 7.100523e-06	k: 8	n:2220000
ZNF479   2220000 perm   2166 sec   (1025 perm/sec)   p_kst 3.603604e-06   p_cons 9.999725e-01   p_joint 6.756757e-06

Joint ci ratio: 9.799963e-01	ci left: 3.764752e-06	ci right 1.109424e-05	k: 15	n:2230000
Cons ci ratio: 1.384148e-05	ci left: 9.999649e-01	ci right 9.999791e-01	k: 2229939	n:2230000
KS ci ratio: 1.306664e+00	ci left: 1.548805e-06	ci right 7.068682e-06	k: 8	n:2230000
ZNF479   2230000 perm   2195 sec   (1016 perm/sec)   p_kst 3.587444e-06   p_cons 9.999726e-01   p_joint 6.726457e-06

Joint ci ratio: 9.799963e-01	ci left: 3.747945e-06	ci right 1.104472e-05	k: 15	n:2240000
Cons ci ratio: 1.377969e-05	ci left: 9.999650e-01	ci right 9.999792e-01	k: 2239939	n:2240000
KS ci ratio: 1.306664e+00	ci left: 1.541891e-06	ci right 7.037126e-06	k: 8	n:2240000
ZNF479   2240000 perm   2218 sec   (1010 perm/sec)   p_kst 3.571429e-06   p_cons 9.999728e-01   p_joint 6.696429e-06

Joint ci ratio: 9.799963e-01	ci left: 3.731287e-06	ci right 1.099563e-05	k: 15	n:2250000
Cons ci ratio: 1.393796e-05	ci left: 9.999642e-01	ci right 9.999785e-01	k: 2249937	n:2250000
KS ci ratio: 1.306664e+00	ci left: 1.535038e-06	ci right 7.005850e-06	k: 8	n:2250000
ZNF479   2250000 perm   2235 sec   (1007 perm/sec)   p_kst 3.555556e-06   p_cons 9.999720e-01   p_joint 6.666667e-06

Joint ci ratio: 9.799963e-01	ci left: 3.714777e-06	ci right 1.094698e-05	k: 15	n:2260000
Cons ci ratio: 1.387629e-05	ci left: 9.999643e-01	ci right 9.999786e-01	k: 2259937	n:2260000
KS ci ratio: 1.306664e+00	ci left: 1.528246e-06	ci right 6.974851e-06	k: 8	n:2260000
ZNF479   2260000 perm   2253 sec   (1003 perm/sec)   p_kst 3.539823e-06   p_cons 9.999721e-01   p_joint 6.637168e-06

Joint ci ratio: 9.799963e-01	ci left: 3.698413e-06	ci right 1.089875e-05	k: 15	n:2270000
Cons ci ratio: 1.381516e-05	ci left: 9.999645e-01	ci right 9.999787e-01	k: 2269937	n:2270000
KS ci ratio: 1.306664e+00	ci left: 1.521513e-06	ci right 6.944124e-06	k: 8	n:2270000
ZNF479   2270000 perm   2272 sec   (999 perm/sec)   p_kst 3.524229e-06   p_cons 9.999722e-01   p_joint 6.607930e-06

Joint ci ratio: 9.799963e-01	ci left: 3.682191e-06	ci right 1.085095e-05	k: 15	n:2280000
Cons ci ratio: 1.375456e-05	ci left: 9.999646e-01	ci right 9.999788e-01	k: 2279937	n:2280000
KS ci ratio: 1.306664e+00	ci left: 1.514840e-06	ci right 6.913668e-06	k: 8	n:2280000
ZNF479   2280000 perm   2299 sec   (992 perm/sec)   p_kst 3.508772e-06   p_cons 9.999724e-01   p_joint 6.578947e-06

Joint ci ratio: 9.799964e-01	ci left: 3.666112e-06	ci right 1.080357e-05	k: 15	n:2290000
Cons ci ratio: 1.369450e-05	ci left: 9.999648e-01	ci right 9.999789e-01	k: 2289937	n:2290000
KS ci ratio: 1.306664e+00	ci left: 1.508225e-06	ci right 6.883477e-06	k: 8	n:2290000
ZNF479   2290000 perm   2319 sec   (987 perm/sec)   p_kst 3.493450e-06   p_cons 9.999725e-01   p_joint 6.550218e-06

Joint ci ratio: 6.048635e-01	ci left: 1.279234e-05	ci right 2.418302e-05	k: 41	n:2300000
Cons ci ratio: 1.363496e-05	ci left: 9.999650e-01	ci right 9.999790e-01	k: 2299937	n:2300000
KS ci ratio: 1.239610e+00	ci left: 1.789294e-06	ci right 7.428162e-06	k: 9	n:2300000
ZNF479   2300000 perm   2337 sec   (984 perm/sec)   p_kst 3.913043e-06   p_cons 9.999726e-01   p_joint 1.782609e-05

Joint ci ratio: 6.048635e-01	ci left: 1.273696e-05	ci right 2.407833e-05	k: 41	n:2310000
Cons ci ratio: 1.357593e-05	ci left: 9.999651e-01	ci right 9.999790e-01	k: 2309937	n:2310000
KS ci ratio: 1.239610e+00	ci left: 1.781548e-06	ci right 7.396006e-06	k: 9	n:2310000
ZNF479   2310000 perm   2355 sec   (981 perm/sec)   p_kst 3.896104e-06   p_cons 9.999727e-01   p_joint 1.774892e-05

Joint ci ratio: 6.048635e-01	ci left: 1.268206e-05	ci right 2.397455e-05	k: 41	n:2320000
Cons ci ratio: 1.351741e-05	ci left: 9.999653e-01	ci right 9.999791e-01	k: 2319937	n:2320000
KS ci ratio: 1.239610e+00	ci left: 1.773869e-06	ci right 7.364127e-06	k: 9	n:2320000
ZNF479   2320000 perm   2374 sec   (977 perm/sec)   p_kst 3.879310e-06   p_cons 9.999728e-01   p_joint 1.767241e-05

Joint ci ratio: 6.048636e-01	ci left: 1.262763e-05	ci right 2.387165e-05	k: 41	n:2330000
Cons ci ratio: 1.345940e-05	ci left: 9.999654e-01	ci right 9.999792e-01	k: 2329937	n:2330000
KS ci ratio: 1.239610e+00	ci left: 1.766256e-06	ci right 7.332521e-06	k: 9	n:2330000
ZNF479   2330000 perm   2394 sec   (973 perm/sec)   p_kst 3.862661e-06   p_cons 9.999730e-01   p_joint 1.759657e-05

Joint ci ratio: 6.048636e-01	ci left: 1.257366e-05	ci right 2.376964e-05	k: 41	n:2340000
Cons ci ratio: 1.340188e-05	ci left: 9.999656e-01	ci right 9.999793e-01	k: 2339937	n:2340000
KS ci ratio: 1.239610e+00	ci left: 1.758708e-06	ci right 7.301185e-06	k: 9	n:2340000
ZNF479   2340000 perm   2419 sec   (967 perm/sec)   p_kst 3.846154e-06   p_cons 9.999731e-01   p_joint 1.752137e-05

Joint ci ratio: 5.977888e-01	ci left: 1.288084e-05	ci right 2.415814e-05	k: 42	n:2350000
Cons ci ratio: 1.334485e-05	ci left: 9.999657e-01	ci right 9.999794e-01	k: 2349937	n:2350000
KS ci ratio: 1.239610e+00	ci left: 1.751224e-06	ci right 7.270117e-06	k: 9	n:2350000
ZNF479   2350000 perm   2444 sec   (962 perm/sec)   p_kst 3.829787e-06   p_cons 9.999732e-01   p_joint 1.787234e-05

Joint ci ratio: 5.977888e-01	ci left: 1.282626e-05	ci right 2.405577e-05	k: 42	n:2360000
Cons ci ratio: 1.328830e-05	ci left: 9.999658e-01	ci right 9.999795e-01	k: 2359937	n:2360000
KS ci ratio: 1.239610e+00	ci left: 1.743804e-06	ci right 7.239311e-06	k: 9	n:2360000
ZNF479   2360000 perm   2464 sec   (958 perm/sec)   p_kst 3.813559e-06   p_cons 9.999733e-01   p_joint 1.779661e-05

Joint ci ratio: 5.977888e-01	ci left: 1.277214e-05	ci right 2.395427e-05	k: 42	n:2370000
Cons ci ratio: 1.333521e-05	ci left: 9.999655e-01	ci right 9.999792e-01	k: 2369936	n:2370000
KS ci ratio: 1.239610e+00	ci left: 1.736446e-06	ci right 7.208766e-06	k: 9	n:2370000
ZNF479   2370000 perm   2483 sec   (954 perm/sec)   p_kst 3.797468e-06   p_cons 9.999730e-01   p_joint 1.772152e-05

Joint ci ratio: 5.977889e-01	ci left: 1.271848e-05	ci right 2.385362e-05	k: 42	n:2380000
Cons ci ratio: 1.327918e-05	ci left: 9.999657e-01	ci right 9.999793e-01	k: 2379936	n:2380000
KS ci ratio: 1.239610e+00	ci left: 1.729150e-06	ci right 7.178477e-06	k: 9	n:2380000
ZNF479   2380000 perm   2502 sec   (951 perm/sec)   p_kst 3.781513e-06   p_cons 9.999731e-01   p_joint 1.764706e-05

Joint ci ratio: 5.909567e-01	ci left: 1.302066e-05	ci right 2.423453e-05	k: 43	n:2390000
Cons ci ratio: 1.332495e-05	ci left: 9.999653e-01	ci right 9.999790e-01	k: 2389935	n:2390000
KS ci ratio: 1.239610e+00	ci left: 1.721915e-06	ci right 7.148441e-06	k: 9	n:2390000
ZNF479   2390000 perm   2521 sec   (948 perm/sec)   p_kst 3.765690e-06   p_cons 9.999728e-01   p_joint 1.799163e-05

Joint ci ratio: 5.909567e-01	ci left: 1.296641e-05	ci right 2.413356e-05	k: 43	n:2400000
Cons ci ratio: 1.326943e-05	ci left: 9.999655e-01	ci right 9.999791e-01	k: 2399935	n:2400000
KS ci ratio: 1.239610e+00	ci left: 1.714740e-06	ci right 7.118656e-06	k: 9	n:2400000
ZNF479   2400000 perm   2539 sec   (945 perm/sec)   p_kst 3.750000e-06   p_cons 9.999729e-01   p_joint 1.791667e-05

Joint ci ratio: 5.843535e-01	ci left: 1.326578e-05	ci right 2.450944e-05	k: 44	n:2410000
Cons ci ratio: 1.321437e-05	ci left: 9.999656e-01	ci right 9.999792e-01	k: 2409935	n:2410000
KS ci ratio: 1.239610e+00	ci left: 1.707625e-06	ci right 7.089118e-06	k: 9	n:2410000
ZNF479   2410000 perm   2558 sec   (942 perm/sec)   p_kst 3.734440e-06   p_cons 9.999730e-01   p_joint 1.825726e-05

Joint ci ratio: 5.843535e-01	ci left: 1.321097e-05	ci right 2.440817e-05	k: 44	n:2420000
Cons ci ratio: 1.315977e-05	ci left: 9.999658e-01	ci right 9.999793e-01	k: 2419935	n:2420000
KS ci ratio: 1.239610e+00	ci left: 1.700569e-06	ci right 7.059824e-06	k: 9	n:2420000
ZNF479   2420000 perm   2586 sec   (936 perm/sec)   p_kst 3.719008e-06   p_cons 9.999731e-01   p_joint 1.818182e-05

Joint ci ratio: 5.843536e-01	ci left: 1.315660e-05	ci right 2.430772e-05	k: 44	n:2430000
Cons ci ratio: 1.310561e-05	ci left: 9.999659e-01	ci right 9.999794e-01	k: 2429935	n:2430000
KS ci ratio: 1.239610e+00	ci left: 1.693571e-06	ci right 7.030772e-06	k: 9	n:2430000
ZNF479   2430000 perm   2612 sec   (930 perm/sec)   p_kst 3.703704e-06   p_cons 9.999733e-01   p_joint 1.810700e-05

Joint ci ratio: 5.843536e-01	ci left: 1.310268e-05	ci right 2.420810e-05	k: 44	n:2440000
Cons ci ratio: 1.305190e-05	ci left: 9.999660e-01	ci right 9.999794e-01	k: 2439935	n:2440000
KS ci ratio: 1.239610e+00	ci left: 1.686630e-06	ci right 7.001957e-06	k: 9	n:2440000
ZNF479   2440000 perm   2634 sec   (926 perm/sec)   p_kst 3.688525e-06   p_cons 9.999734e-01   p_joint 1.803279e-05

Joint ci ratio: 5.843536e-01	ci left: 1.304920e-05	ci right 2.410929e-05	k: 44	n:2450000
Cons ci ratio: 1.299862e-05	ci left: 9.999662e-01	ci right 9.999795e-01	k: 2449935	n:2450000
KS ci ratio: 1.239610e+00	ci left: 1.679745e-06	ci right 6.973378e-06	k: 9	n:2450000
ZNF479   2450000 perm   2653 sec   (923 perm/sec)   p_kst 3.673469e-06   p_cons 9.999735e-01   p_joint 1.795918e-05

Joint ci ratio: 5.843536e-01	ci left: 1.299615e-05	ci right 2.401129e-05	k: 44	n:2460000
Cons ci ratio: 1.294578e-05	ci left: 9.999663e-01	ci right 9.999796e-01	k: 2459935	n:2460000
KS ci ratio: 1.239610e+00	ci left: 1.672917e-06	ci right 6.945031e-06	k: 9	n:2460000
ZNF479   2460000 perm   2673 sec   (920 perm/sec)   p_kst 3.658537e-06   p_cons 9.999736e-01   p_joint 1.788618e-05

Joint ci ratio: 5.779670e-01	ci left: 1.328882e-05	ci right 2.437788e-05	k: 45	n:2470000
Cons ci ratio: 1.299068e-05	ci left: 9.999660e-01	ci right 9.999793e-01	k: 2469934	n:2470000
KS ci ratio: 1.239610e+00	ci left: 1.666144e-06	ci right 6.916913e-06	k: 9	n:2470000
ZNF479   2470000 perm   2692 sec   (917 perm/sec)   p_kst 3.643725e-06   p_cons 9.999733e-01   p_joint 1.821862e-05

Joint ci ratio: 5.779670e-01	ci left: 1.323523e-05	ci right 2.427958e-05	k: 45	n:2480000
Cons ci ratio: 1.293830e-05	ci left: 9.999661e-01	ci right 9.999794e-01	k: 2479934	n:2480000
KS ci ratio: 1.239610e+00	ci left: 1.659426e-06	ci right 6.889022e-06	k: 9	n:2480000
ZNF479   2480000 perm   2712 sec   (914 perm/sec)   p_kst 3.629032e-06   p_cons 9.999734e-01   p_joint 1.814516e-05

Joint ci ratio: 5.779670e-01	ci left: 1.318208e-05	ci right 2.418207e-05	k: 45	n:2490000
Cons ci ratio: 1.288634e-05	ci left: 9.999663e-01	ci right 9.999795e-01	k: 2489934	n:2490000
KS ci ratio: 1.239610e+00	ci left: 1.652762e-06	ci right 6.861356e-06	k: 9	n:2490000
ZNF479   2490000 perm   2732 sec   (911 perm/sec)   p_kst 3.614458e-06   p_cons 9.999735e-01   p_joint 1.807229e-05

Joint ci ratio: 3.959720e-01	ci left: 3.146430e-05	ci right 4.733251e-05	k: 97	n:2500000
Cons ci ratio: 1.283479e-05	ci left: 9.999664e-01	ci right 9.999796e-01	k: 2499934	n:2500000
KS ci ratio: 1.181922e+00	ci left: 1.918157e-06	ci right 7.356130e-06	k: 10	n:2500000
ZNF479   2500000 perm   2752 sec   (909 perm/sec)   p_kst 4.000000e-06   p_cons 9.999736e-01   p_joint 3.880000e-05

Joint ci ratio: 3.959720e-01	ci left: 3.133894e-05	ci right 4.714393e-05	k: 97	n:2510000
Cons ci ratio: 1.278366e-05	ci left: 9.999665e-01	ci right 9.999797e-01	k: 2509934	n:2510000
KS ci ratio: 1.181922e+00	ci left: 1.910515e-06	ci right 7.326823e-06	k: 10	n:2510000
ZNF479   2510000 perm   2772 sec   (906 perm/sec)   p_kst 3.984064e-06   p_cons 9.999737e-01   p_joint 3.864542e-05

Joint ci ratio: 3.939670e-01	ci left: 3.157199e-05	ci right 4.739290e-05	k: 98	n:2520000
Cons ci ratio: 1.282760e-05	ci left: 9.999662e-01	ci right 9.999794e-01	k: 2519933	n:2520000
KS ci ratio: 1.181922e+00	ci left: 1.902934e-06	ci right 7.297748e-06	k: 10	n:2520000
ZNF479   2520000 perm   2792 sec   (903 perm/sec)   p_kst 3.968254e-06   p_cons 9.999734e-01   p_joint 3.888889e-05

Joint ci ratio: 3.939670e-01	ci left: 3.144720e-05	ci right 4.720557e-05	k: 98	n:2530000
Cons ci ratio: 1.277690e-05	ci left: 9.999664e-01	ci right 9.999795e-01	k: 2529933	n:2530000
KS ci ratio: 1.181922e+00	ci left: 1.895412e-06	ci right 7.268903e-06	k: 10	n:2530000
ZNF479   2530000 perm   2811 sec   (900 perm/sec)   p_kst 3.952569e-06   p_cons 9.999735e-01   p_joint 3.873518e-05

Joint ci ratio: 3.919922e-01	ci left: 3.167819e-05	ci right 4.745214e-05	k: 99	n:2540000
Cons ci ratio: 1.272659e-05	ci left: 9.999665e-01	ci right 9.999796e-01	k: 2539933	n:2540000
KS ci ratio: 1.181922e+00	ci left: 1.887950e-06	ci right 7.240286e-06	k: 10	n:2540000
ZNF479   2540000 perm   2832 sec   (897 perm/sec)   p_kst 3.937008e-06   p_cons 9.999736e-01   p_joint 3.897638e-05

Joint ci ratio: 3.919922e-01	ci left: 3.155396e-05	ci right 4.726605e-05	k: 99	n:2550000
Cons ci ratio: 1.276956e-05	ci left: 9.999662e-01	ci right 9.999793e-01	k: 2549932	n:2550000
KS ci ratio: 1.181922e+00	ci left: 1.880546e-06	ci right 7.211892e-06	k: 10	n:2550000
ZNF479   2550000 perm   2852 sec   (894 perm/sec)   p_kst 3.921569e-06   p_cons 9.999733e-01   p_joint 3.882353e-05

Joint ci ratio: 3.900468e-01	ci left: 3.178292e-05	ci right 4.751027e-05	k: 100	n:2560000
Cons ci ratio: 1.271968e-05	ci left: 9.999663e-01	ci right 9.999794e-01	k: 2559932	n:2560000
KS ci ratio: 1.181922e+00	ci left: 1.873200e-06	ci right 7.183721e-06	k: 10	n:2560000
ZNF479   2560000 perm   2873 sec   (891 perm/sec)   p_kst 3.906250e-06   p_cons 9.999734e-01   p_joint 3.906250e-05

Joint ci ratio: 3.900468e-01	ci left: 3.165925e-05	ci right 4.732540e-05	k: 100	n:2570000
Cons ci ratio: 1.276167e-05	ci left: 9.999660e-01	ci right 9.999791e-01	k: 2569931	n:2570000
KS ci ratio: 1.181922e+00	ci left: 1.865912e-06	ci right 7.155769e-06	k: 10	n:2570000
ZNF479   2570000 perm   2892 sec   (889 perm/sec)   p_kst 3.891051e-06   p_cons 9.999732e-01   p_joint 3.891051e-05

Joint ci ratio: 3.881301e-01	ci left: 3.188622e-05	ci right 4.756730e-05	k: 101	n:2580000
Cons ci ratio: 1.271220e-05	ci left: 9.999662e-01	ci right 9.999792e-01	k: 2579931	n:2580000
KS ci ratio: 1.181922e+00	ci left: 1.858679e-06	ci right 7.128033e-06	k: 10	n:2580000
ZNF479   2580000 perm   2913 sec   (886 perm/sec)   p_kst 3.875969e-06   p_cons 9.999733e-01   p_joint 3.914729e-05

Joint ci ratio: 3.881301e-01	ci left: 3.176310e-05	ci right 4.738365e-05	k: 101	n:2590000
Cons ci ratio: 1.275325e-05	ci left: 9.999659e-01	ci right 9.999789e-01	k: 2589930	n:2590000
KS ci ratio: 1.181922e+00	ci left: 1.851503e-06	ci right 7.100512e-06	k: 10	n:2590000
ZNF479   2590000 perm   2934 sec   (883 perm/sec)   p_kst 3.861004e-06   p_cons 9.999730e-01   p_joint 3.899614e-05

Joint ci ratio: 3.881301e-01	ci left: 3.164094e-05	ci right 4.720140e-05	k: 101	n:2600000
Cons ci ratio: 1.270420e-05	ci left: 9.999660e-01	ci right 9.999790e-01	k: 2599930	n:2600000
KS ci ratio: 1.181922e+00	ci left: 1.844382e-06	ci right 7.073202e-06	k: 10	n:2600000
ZNF479   2600000 perm   2955 sec   (880 perm/sec)   p_kst 3.846154e-06   p_cons 9.999731e-01   p_joint 3.884615e-05

Joint ci ratio: 4.109204e-01	ci left: 2.772830e-05	ci right 4.238500e-05	k: 90	n:2610000
Cons ci ratio: 1.274434e-05	ci left: 9.999657e-01	ci right 9.999788e-01	k: 2609929	n:2610000
KS ci ratio: 1.181922e+00	ci left: 1.837315e-06	ci right 7.046102e-06	k: 10	n:2610000
ZNF479   2610000 perm   2975 sec   (877 perm/sec)   p_kst 3.831418e-06   p_cons 9.999728e-01   p_joint 3.448276e-05

Joint ci ratio: 1.239610e+00	ci left: 1.570754e-06	ci right 6.520907e-06	k: 9	n:2620000
Cons ci ratio: 1.269570e-05	ci left: 9.999658e-01	ci right 9.999788e-01	k: 2619929	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
ZNF479   2620000 perm   2995 sec   (875 perm/sec)   p_kst 3.816794e-07   p_cons 9.999729e-01   p_joint 3.435115e-06

Joint ci ratio: 1.239610e+00	ci left: 1.564782e-06	ci right 6.496113e-06	k: 9	n:2630000
Cons ci ratio: 1.264742e-05	ci left: 9.999659e-01	ci right 9.999789e-01	k: 2629929	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
ZNF479   2630000 perm   3016 sec   (872 perm/sec)   p_kst 3.802281e-07   p_cons 9.999730e-01   p_joint 3.422053e-06

Joint ci ratio: 1.239610e+00	ci left: 1.558855e-06	ci right 6.471507e-06	k: 9	n:2640000
Cons ci ratio: 1.259952e-05	ci left: 9.999661e-01	ci right 9.999790e-01	k: 2639929	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
ZNF479   2640000 perm   3036 sec   (870 perm/sec)   p_kst 3.787879e-07   p_cons 9.999731e-01   p_joint 3.409091e-06

Joint ci ratio: 1.239610e+00	ci left: 1.552972e-06	ci right 6.447086e-06	k: 9	n:2650000
Cons ci ratio: 1.255197e-05	ci left: 9.999662e-01	ci right 9.999791e-01	k: 2649929	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
ZNF479   2650000 perm   3056 sec   (867 perm/sec)   p_kst 3.773585e-07   p_cons 9.999732e-01   p_joint 3.396226e-06

Joint ci ratio: 1.239610e+00	ci left: 1.547134e-06	ci right 6.422849e-06	k: 9	n:2660000
Cons ci ratio: 1.250478e-05	ci left: 9.999663e-01	ci right 9.999792e-01	k: 2659929	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
ZNF479   2660000 perm   3077 sec   (864 perm/sec)   p_kst 3.759398e-07   p_cons 9.999733e-01   p_joint 3.383459e-06

Joint ci ratio: 1.239610e+00	ci left: 1.541339e-06	ci right 6.398793e-06	k: 9	n:2670000
Cons ci ratio: 1.245795e-05	ci left: 9.999665e-01	ci right 9.999792e-01	k: 2669929	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
ZNF479   2670000 perm   3099 sec   (862 perm/sec)   p_kst 3.745318e-07   p_cons 9.999734e-01   p_joint 3.370787e-06

Joint ci ratio: 1.239610e+00	ci left: 1.535588e-06	ci right 6.374917e-06	k: 9	n:2680000
Cons ci ratio: 1.241146e-05	ci left: 9.999666e-01	ci right 9.999793e-01	k: 2679929	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
ZNF479   2680000 perm   3120 sec   (859 perm/sec)   p_kst 3.731343e-07   p_cons 9.999735e-01   p_joint 3.358209e-06

Joint ci ratio: 1.239610e+00	ci left: 1.529880e-06	ci right 6.351219e-06	k: 9	n:2690000
Cons ci ratio: 1.236532e-05	ci left: 9.999667e-01	ci right 9.999794e-01	k: 2689929	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
ZNF479   2690000 perm   3140 sec   (857 perm/sec)   p_kst 3.717472e-07   p_cons 9.999736e-01   p_joint 3.345725e-06

Joint ci ratio: 1.239610e+00	ci left: 1.524213e-06	ci right 6.327696e-06	k: 9	n:2700000
Cons ci ratio: 1.240478e-05	ci left: 9.999664e-01	ci right 9.999791e-01	k: 2699928	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
ZNF479   2700000 perm   3162 sec   (854 perm/sec)   p_kst 3.703704e-07   p_cons 9.999733e-01   p_joint 3.333333e-06

Joint ci ratio: 1.239610e+00	ci left: 1.518589e-06	ci right 6.304346e-06	k: 9	n:2710000
Cons ci ratio: 1.235901e-05	ci left: 9.999665e-01	ci right 9.999792e-01	k: 2709928	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
ZNF479   2710000 perm   3183 sec   (851 perm/sec)   p_kst 3.690037e-07   p_cons 9.999734e-01   p_joint 3.321033e-06

Joint ci ratio: 1.239610e+00	ci left: 1.513006e-06	ci right 6.281168e-06	k: 9	n:2720000
Cons ci ratio: 1.231357e-05	ci left: 9.999667e-01	ci right 9.999793e-01	k: 2719928	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
ZNF479   2720000 perm   3205 sec   (849 perm/sec)   p_kst 3.676471e-07   p_cons 9.999735e-01   p_joint 3.308824e-06

Joint ci ratio: 1.239610e+00	ci left: 1.507464e-06	ci right 6.258160e-06	k: 9	n:2730000
Cons ci ratio: 1.226847e-05	ci left: 9.999668e-01	ci right 9.999794e-01	k: 2729928	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
ZNF479   2730000 perm   3228 sec   (846 perm/sec)   p_kst 3.663004e-07   p_cons 9.999736e-01   p_joint 3.296703e-06

Joint ci ratio: 1.239610e+00	ci left: 1.501962e-06	ci right 6.235321e-06	k: 9	n:2740000
Cons ci ratio: 1.222369e-05	ci left: 9.999669e-01	ci right 9.999794e-01	k: 2739928	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
ZNF479   2740000 perm   3249 sec   (843 perm/sec)   p_kst 3.649635e-07   p_cons 9.999737e-01   p_joint 3.284672e-06

Joint ci ratio: 1.239610e+00	ci left: 1.496500e-06	ci right 6.212647e-06	k: 9	n:2750000
Cons ci ratio: 1.217924e-05	ci left: 9.999670e-01	ci right 9.999795e-01	k: 2749928	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
ZNF479   2750000 perm   3274 sec   (840 perm/sec)   p_kst 3.636364e-07   p_cons 9.999738e-01   p_joint 3.272727e-06

Joint ci ratio: 1.239610e+00	ci left: 1.491078e-06	ci right 6.190137e-06	k: 9	n:2760000
Cons ci ratio: 1.213511e-05	ci left: 9.999671e-01	ci right 9.999796e-01	k: 2759928	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
ZNF479   2760000 perm   3302 sec   (836 perm/sec)   p_kst 3.623188e-07   p_cons 9.999739e-01   p_joint 3.260870e-06

Joint ci ratio: 1.239610e+00	ci left: 1.485695e-06	ci right 6.167790e-06	k: 9	n:2770000
Cons ci ratio: 1.209130e-05	ci left: 9.999673e-01	ci right 9.999797e-01	k: 2769928	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
ZNF479   2770000 perm   3324 sec   (833 perm/sec)   p_kst 3.610108e-07   p_cons 9.999740e-01   p_joint 3.249097e-06

Joint ci ratio: 1.239610e+00	ci left: 1.480351e-06	ci right 6.145604e-06	k: 9	n:2780000
Cons ci ratio: 1.221173e-05	ci left: 9.999666e-01	ci right 9.999791e-01	k: 2779926	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
ZNF479   2780000 perm   3358 sec   (828 perm/sec)   p_kst 3.597122e-07   p_cons 9.999734e-01   p_joint 3.237410e-06

Joint ci ratio: 1.239610e+00	ci left: 1.475045e-06	ci right 6.123577e-06	k: 9	n:2790000
Cons ci ratio: 1.216796e-05	ci left: 9.999667e-01	ci right 9.999792e-01	k: 2789926	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
ZNF479   2790000 perm   3380 sec   (825 perm/sec)   p_kst 3.584229e-07   p_cons 9.999735e-01   p_joint 3.225806e-06

Joint ci ratio: 1.239610e+00	ci left: 1.469777e-06	ci right 6.101707e-06	k: 9	n:2800000
Cons ci ratio: 1.145962e-05	ci left: 9.999700e-01	ci right 9.999818e-01	k: 2799934	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
ZNF479   2800000 perm   3402 sec   (823 perm/sec)   p_kst 3.571429e-07   p_cons 9.999764e-01   p_joint 3.214286e-06

Joint ci ratio: 1.239610e+00	ci left: 1.464547e-06	ci right 6.079992e-06	k: 9	n:2810000
Cons ci ratio: 1.141884e-05	ci left: 9.999701e-01	ci right 9.999818e-01	k: 2809934	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
ZNF479   2810000 perm   3424 sec   (821 perm/sec)   p_kst 3.558719e-07   p_cons 9.999765e-01   p_joint 3.202847e-06

Joint ci ratio: 1.239610e+00	ci left: 1.459353e-06	ci right 6.058432e-06	k: 9	n:2820000
Cons ci ratio: 1.137835e-05	ci left: 9.999702e-01	ci right 9.999819e-01	k: 2819934	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
ZNF479   2820000 perm   3446 sec   (818 perm/sec)   p_kst 3.546099e-07   p_cons 9.999766e-01   p_joint 3.191489e-06

Joint ci ratio: 1.239610e+00	ci left: 1.454196e-06	ci right 6.037024e-06	k: 9	n:2830000
Cons ci ratio: 1.133814e-05	ci left: 9.999703e-01	ci right 9.999820e-01	k: 2829934	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
ZNF479   2830000 perm   3468 sec   (816 perm/sec)   p_kst 3.533569e-07   p_cons 9.999767e-01   p_joint 3.180212e-06

Joint ci ratio: 1.239610e+00	ci left: 1.449076e-06	ci right 6.015767e-06	k: 9	n:2840000
Cons ci ratio: 1.129822e-05	ci left: 9.999704e-01	ci right 9.999820e-01	k: 2839934	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
ZNF479   2840000 perm   3490 sec   (814 perm/sec)   p_kst 3.521127e-07   p_cons 9.999768e-01   p_joint 3.169014e-06

Joint ci ratio: 1.239610e+00	ci left: 1.443992e-06	ci right 5.994659e-06	k: 9	n:2850000
Cons ci ratio: 1.125857e-05	ci left: 9.999705e-01	ci right 9.999821e-01	k: 2849934	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
ZNF479   2850000 perm   3512 sec   (811 perm/sec)   p_kst 3.508772e-07   p_cons 9.999768e-01   p_joint 3.157895e-06

Joint ci ratio: 1.239610e+00	ci left: 1.438943e-06	ci right 5.973699e-06	k: 9	n:2860000
Cons ci ratio: 1.121921e-05	ci left: 9.999706e-01	ci right 9.999822e-01	k: 2859934	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
ZNF479   2860000 perm   3534 sec   (809 perm/sec)   p_kst 3.496503e-07   p_cons 9.999769e-01   p_joint 3.146853e-06

Joint ci ratio: 1.239610e+00	ci left: 1.433929e-06	ci right 5.952885e-06	k: 9	n:2870000
Cons ci ratio: 1.118011e-05	ci left: 9.999707e-01	ci right 9.999822e-01	k: 2869934	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
ZNF479   2870000 perm   3556 sec   (807 perm/sec)   p_kst 3.484321e-07   p_cons 9.999770e-01   p_joint 3.135889e-06

Joint ci ratio: 1.239610e+00	ci left: 1.428950e-06	ci right 5.932215e-06	k: 9	n:2880000
Cons ci ratio: 1.114129e-05	ci left: 9.999708e-01	ci right 9.999823e-01	k: 2879934	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
ZNF479   2880000 perm   3579 sec   (805 perm/sec)   p_kst 3.472222e-07   p_cons 9.999771e-01   p_joint 3.125000e-06

Joint ci ratio: 1.239610e+00	ci left: 1.424005e-06	ci right 5.911688e-06	k: 9	n:2890000
Cons ci ratio: 1.110274e-05	ci left: 9.999709e-01	ci right 9.999823e-01	k: 2889934	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
ZNF479   2890000 perm   3607 sec   (801 perm/sec)   p_kst 3.460208e-07   p_cons 9.999772e-01   p_joint 3.114187e-06

Joint ci ratio: 1.239610e+00	ci left: 1.419095e-06	ci right 5.891303e-06	k: 9	n:2900000
Cons ci ratio: 1.106446e-05	ci left: 9.999710e-01	ci right 9.999824e-01	k: 2899934	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
ZNF479   2900000 perm   3630 sec   (799 perm/sec)   p_kst 3.448276e-07   p_cons 9.999772e-01   p_joint 3.103448e-06

Joint ci ratio: 1.385927e+00	ci left: 9.671356e-07	ci right 4.956240e-06	k: 7	n:2910000
Cons ci ratio: 1.102643e-05	ci left: 9.999711e-01	ci right 9.999825e-01	k: 2909934	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
ZNF479   2910000 perm   3652 sec   (797 perm/sec)   p_kst 3.436426e-07   p_cons 9.999773e-01   p_joint 2.405498e-06

Joint ci ratio: 1.385927e+00	ci left: 9.638235e-07	ci right 4.939266e-06	k: 7	n:2920000
Cons ci ratio: 1.098867e-05	ci left: 9.999712e-01	ci right 9.999825e-01	k: 2919934	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
ZNF479   2920000 perm   3674 sec   (795 perm/sec)   p_kst 3.424658e-07   p_cons 9.999774e-01   p_joint 2.397260e-06

Joint ci ratio: 1.385927e+00	ci left: 9.605340e-07	ci right 4.922409e-06	k: 7	n:2930000
Cons ci ratio: 1.103259e-05	ci left: 9.999710e-01	ci right 9.999823e-01	k: 2929933	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
ZNF479   2930000 perm   3697 sec   (793 perm/sec)   p_kst 3.412969e-07   p_cons 9.999771e-01   p_joint 2.389078e-06

Joint ci ratio: 1.385927e+00	ci left: 9.572669e-07	ci right 4.905666e-06	k: 7	n:2940000
Cons ci ratio: 1.099507e-05	ci left: 9.999711e-01	ci right 9.999823e-01	k: 2939933	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
ZNF479   2940000 perm   3720 sec   (790 perm/sec)   p_kst 3.401361e-07   p_cons 9.999772e-01   p_joint 2.380952e-06

Joint ci ratio: 1.385927e+00	ci left: 9.540219e-07	ci right 4.889036e-06	k: 7	n:2950000
Cons ci ratio: 1.095779e-05	ci left: 9.999712e-01	ci right 9.999824e-01	k: 2949933	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
ZNF479   2950000 perm   3743 sec   (788 perm/sec)   p_kst 3.389831e-07   p_cons 9.999773e-01   p_joint 2.372881e-06

Joint ci ratio: 1.385927e+00	ci left: 9.507988e-07	ci right 4.872519e-06	k: 7	n:2960000
Cons ci ratio: 1.100078e-05	ci left: 9.999709e-01	ci right 9.999822e-01	k: 2959932	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
ZNF479   2960000 perm   3766 sec   (786 perm/sec)   p_kst 3.378378e-07   p_cons 9.999770e-01   p_joint 2.364865e-06

Joint ci ratio: 1.385927e+00	ci left: 9.475975e-07	ci right 4.856114e-06	k: 7	n:2970000
Cons ci ratio: 1.104291e-05	ci left: 9.999706e-01	ci right 9.999819e-01	k: 2969931	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
ZNF479   2970000 perm   3789 sec   (784 perm/sec)   p_kst 3.367003e-07   p_cons 9.999768e-01   p_joint 2.356902e-06

Joint ci ratio: 1.385927e+00	ci left: 9.444176e-07	ci right 4.839818e-06	k: 7	n:2980000
Cons ci ratio: 1.100585e-05	ci left: 9.999707e-01	ci right 9.999820e-01	k: 2979931	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
ZNF479   2980000 perm   3811 sec   (782 perm/sec)   p_kst 3.355705e-07   p_cons 9.999768e-01   p_joint 2.348993e-06

Joint ci ratio: 1.385927e+00	ci left: 9.412590e-07	ci right 4.823631e-06	k: 7	n:2990000
Cons ci ratio: 1.096904e-05	ci left: 9.999708e-01	ci right 9.999820e-01	k: 2989931	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
ZNF479   2990000 perm   3834 sec   (780 perm/sec)   p_kst 3.344482e-07   p_cons 9.999769e-01   p_joint 2.341137e-06

Joint ci ratio: 1.385927e+00	ci left: 9.381215e-07	ci right 4.807553e-06	k: 7	n:3000000
Cons ci ratio: 1.101029e-05	ci left: 9.999705e-01	ci right 9.999818e-01	k: 2999930	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
ZNF479   3000000 perm   3858 sec   (778 perm/sec)   p_kst 3.333333e-07   p_cons 9.999767e-01   p_joint 2.333333e-06

Joint ci ratio: 1.385927e+00	ci left: 9.350048e-07	ci right 4.791581e-06	k: 7	n:3010000
Cons ci ratio: 1.097371e-05	ci left: 9.999706e-01	ci right 9.999819e-01	k: 3009930	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
ZNF479   3010000 perm   3881 sec   (776 perm/sec)   p_kst 3.322259e-07   p_cons 9.999767e-01   p_joint 2.325581e-06

Joint ci ratio: 1.385927e+00	ci left: 9.319088e-07	ci right 4.775714e-06	k: 7	n:3020000
Cons ci ratio: 1.101413e-05	ci left: 9.999703e-01	ci right 9.999816e-01	k: 3019929	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
ZNF479   3020000 perm   3904 sec   (774 perm/sec)   p_kst 3.311258e-07   p_cons 9.999765e-01   p_joint 2.317881e-06

Joint ci ratio: 1.306665e+00	ci left: 1.139879e-06	ci right 5.202366e-06	k: 8	n:3030000
Cons ci ratio: 1.112921e-05	ci left: 9.999697e-01	ci right 9.999811e-01	k: 3029927	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
ZNF479   3030000 perm   3927 sec   (772 perm/sec)   p_kst 3.300330e-07   p_cons 9.999759e-01   p_joint 2.640264e-06

Joint ci ratio: 1.306665e+00	ci left: 1.136130e-06	ci right 5.185253e-06	k: 8	n:3040000
Cons ci ratio: 1.109260e-05	ci left: 9.999698e-01	ci right 9.999812e-01	k: 3039927	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
ZNF479   3040000 perm   3952 sec   (769 perm/sec)   p_kst 3.289474e-07   p_cons 9.999760e-01   p_joint 2.631579e-06

Joint ci ratio: 1.306665e+00	ci left: 1.132405e-06	ci right 5.168252e-06	k: 8	n:3050000
Cons ci ratio: 1.105623e-05	ci left: 9.999699e-01	ci right 9.999812e-01	k: 3049927	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
ZNF479   3050000 perm   3980 sec   (766 perm/sec)   p_kst 3.278689e-07   p_cons 9.999761e-01   p_joint 2.622951e-06

Joint ci ratio: 1.306665e+00	ci left: 1.128704e-06	ci right 5.151362e-06	k: 8	n:3060000
Cons ci ratio: 1.102010e-05	ci left: 9.999700e-01	ci right 9.999813e-01	k: 3059927	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
ZNF479   3060000 perm   4004 sec   (764 perm/sec)   p_kst 3.267974e-07   p_cons 9.999761e-01   p_joint 2.614379e-06

Joint ci ratio: 1.306665e+00	ci left: 1.125027e-06	ci right 5.134583e-06	k: 8	n:3070000
Cons ci ratio: 1.105817e-05	ci left: 9.999697e-01	ci right 9.999811e-01	k: 3069926	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
ZNF479   3070000 perm   4028 sec   (762 perm/sec)   p_kst 3.257329e-07   p_cons 9.999759e-01   p_joint 2.605863e-06

Joint ci ratio: 1.306665e+00	ci left: 1.121375e-06	ci right 5.117912e-06	k: 8	n:3080000
Cons ci ratio: 1.102227e-05	ci left: 9.999698e-01	ci right 9.999811e-01	k: 3079926	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
ZNF479   3080000 perm   4053 sec   (760 perm/sec)   p_kst 3.246753e-07   p_cons 9.999760e-01   p_joint 2.597403e-06

Joint ci ratio: 1.306665e+00	ci left: 1.117746e-06	ci right 5.101349e-06	k: 8	n:3090000
Cons ci ratio: 1.098660e-05	ci left: 9.999699e-01	ci right 9.999812e-01	k: 3089926	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
ZNF479   3090000 perm   4077 sec   (758 perm/sec)   p_kst 3.236246e-07   p_cons 9.999761e-01   p_joint 2.588997e-06

Joint ci ratio: 1.239611e+00	ci left: 1.327541e-06	ci right 5.511220e-06	k: 9	n:3100000
Cons ci ratio: 1.095115e-05	ci left: 9.999700e-01	ci right 9.999813e-01	k: 3099926	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
ZNF479   3100000 perm   4102 sec   (756 perm/sec)   p_kst 3.225806e-07   p_cons 9.999761e-01   p_joint 2.903226e-06

Joint ci ratio: 1.239611e+00	ci left: 1.323272e-06	ci right 5.493499e-06	k: 9	n:3110000
Cons ci ratio: 1.098848e-05	ci left: 9.999698e-01	ci right 9.999810e-01	k: 3109925	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
ZNF479   3110000 perm   4126 sec   (754 perm/sec)   p_kst 3.215434e-07   p_cons 9.999759e-01   p_joint 2.893891e-06

Joint ci ratio: 1.306665e+00	ci left: 1.106998e-06	ci right 5.052298e-06	k: 8	n:3120000
Cons ci ratio: 1.095326e-05	ci left: 9.999699e-01	ci right 9.999811e-01	k: 3119925	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
ZNF479   3120000 perm   4150 sec   (752 perm/sec)   p_kst 3.205128e-07   p_cons 9.999760e-01   p_joint 2.564103e-06

Joint ci ratio: 1.306665e+00	ci left: 1.103461e-06	ci right 5.036156e-06	k: 8	n:3130000
Cons ci ratio: 1.091826e-05	ci left: 9.999700e-01	ci right 9.999812e-01	k: 3129925	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
ZNF479   3130000 perm   4174 sec   (750 perm/sec)   p_kst 3.194888e-07   p_cons 9.999760e-01   p_joint 2.555911e-06

Joint ci ratio: 1.306665e+00	ci left: 1.099947e-06	ci right 5.020118e-06	k: 8	n:3140000
Cons ci ratio: 1.095486e-05	ci left: 9.999697e-01	ci right 9.999809e-01	k: 3139924	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
ZNF479   3140000 perm   4199 sec   (748 perm/sec)   p_kst 3.184713e-07   p_cons 9.999758e-01   p_joint 2.547771e-06

Joint ci ratio: 1.306665e+00	ci left: 1.096455e-06	ci right 5.004181e-06	k: 8	n:3150000
Cons ci ratio: 1.092008e-05	ci left: 9.999698e-01	ci right 9.999810e-01	k: 3149924	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
ZNF479   3150000 perm   4223 sec   (746 perm/sec)   p_kst 3.174603e-07   p_cons 9.999759e-01   p_joint 2.539683e-06

Joint ci ratio: 1.306665e+00	ci left: 1.092985e-06	ci right 4.988345e-06	k: 8	n:3160000
Cons ci ratio: 1.088552e-05	ci left: 9.999699e-01	ci right 9.999811e-01	k: 3159924	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
ZNF479   3160000 perm   4258 sec   (742 perm/sec)   p_kst 3.164557e-07   p_cons 9.999759e-01   p_joint 2.531646e-06

Joint ci ratio: 1.306665e+00	ci left: 1.089538e-06	ci right 4.972609e-06	k: 8	n:3170000
Cons ci ratio: 1.085118e-05	ci left: 9.999700e-01	ci right 9.999811e-01	k: 3169924	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
ZNF479   3170000 perm   4285 sec   (740 perm/sec)   p_kst 3.154574e-07   p_cons 9.999760e-01   p_joint 2.523659e-06

Joint ci ratio: 1.306665e+00	ci left: 1.086111e-06	ci right 4.956972e-06	k: 8	n:3180000
Cons ci ratio: 1.081706e-05	ci left: 9.999701e-01	ci right 9.999812e-01	k: 3179924	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
ZNF479   3180000 perm   4309 sec   (738 perm/sec)   p_kst 3.144654e-07   p_cons 9.999761e-01   p_joint 2.515723e-06

Joint ci ratio: 1.306665e+00	ci left: 1.082707e-06	ci right 4.941433e-06	k: 8	n:3190000
Cons ci ratio: 1.085295e-05	ci left: 9.999698e-01	ci right 9.999810e-01	k: 3189923	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
ZNF479   3190000 perm   4334 sec   (736 perm/sec)   p_kst 3.134796e-07   p_cons 9.999759e-01   p_joint 2.507837e-06

Joint ci ratio: 1.306665e+00	ci left: 1.079323e-06	ci right 4.925991e-06	k: 8	n:3200000
Cons ci ratio: 1.081903e-05	ci left: 9.999699e-01	ci right 9.999810e-01	k: 3199923	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
ZNF479   3200000 perm   4362 sec   (734 perm/sec)   p_kst 3.125000e-07   p_cons 9.999759e-01   p_joint 2.500000e-06

Joint ci ratio: 1.306665e+00	ci left: 1.075961e-06	ci right 4.910645e-06	k: 8	n:3210000
Cons ci ratio: 1.078533e-05	ci left: 9.999700e-01	ci right 9.999811e-01	k: 3209923	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
ZNF479   3210000 perm   4387 sec   (732 perm/sec)   p_kst 3.115265e-07   p_cons 9.999760e-01   p_joint 2.492212e-06

Joint ci ratio: 1.306665e+00	ci left: 1.072619e-06	ci right 4.895394e-06	k: 8	n:3220000
Cons ci ratio: 1.075183e-05	ci left: 9.999701e-01	ci right 9.999811e-01	k: 3219923	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
ZNF479   3220000 perm   4411 sec   (730 perm/sec)   p_kst 3.105590e-07   p_cons 9.999761e-01   p_joint 2.484472e-06

Joint ci ratio: 1.306665e+00	ci left: 1.069298e-06	ci right 4.880238e-06	k: 8	n:3230000
Cons ci ratio: 1.071854e-05	ci left: 9.999702e-01	ci right 9.999812e-01	k: 3229923	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
ZNF479   3230000 perm   4443 sec   (727 perm/sec)   p_kst 3.095975e-07   p_cons 9.999762e-01   p_joint 2.476780e-06

Joint ci ratio: 1.306665e+00	ci left: 1.065998e-06	ci right 4.865176e-06	k: 8	n:3240000
Cons ci ratio: 1.082159e-05	ci left: 9.999696e-01	ci right 9.999807e-01	k: 3239921	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
ZNF479   3240000 perm   4468 sec   (725 perm/sec)   p_kst 3.086420e-07   p_cons 9.999756e-01   p_joint 2.469136e-06

Joint ci ratio: 1.306665e+00	ci left: 1.062718e-06	ci right 4.850206e-06	k: 8	n:3250000
Cons ci ratio: 1.085551e-05	ci left: 9.999694e-01	ci right 9.999805e-01	k: 3249920	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
ZNF479   3250000 perm   4494 sec   (723 perm/sec)   p_kst 3.076923e-07   p_cons 9.999754e-01   p_joint 2.461538e-06

Joint ci ratio: 1.306665e+00	ci left: 1.059458e-06	ci right 4.835328e-06	k: 8	n:3260000
Cons ci ratio: 1.082221e-05	ci left: 9.999695e-01	ci right 9.999805e-01	k: 3259920	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
ZNF479   3260000 perm   4519 sec   (721 perm/sec)   p_kst 3.067485e-07   p_cons 9.999755e-01   p_joint 2.453988e-06

Joint ci ratio: 1.306665e+00	ci left: 1.056218e-06	ci right 4.820541e-06	k: 8	n:3270000
Cons ci ratio: 1.078912e-05	ci left: 9.999696e-01	ci right 9.999806e-01	k: 3269920	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
ZNF479   3270000 perm   4544 sec   (720 perm/sec)   p_kst 3.058104e-07   p_cons 9.999755e-01   p_joint 2.446483e-06

Joint ci ratio: 1.306665e+00	ci left: 1.052998e-06	ci right 4.805845e-06	k: 8	n:3280000
Cons ci ratio: 1.075622e-05	ci left: 9.999696e-01	ci right 9.999807e-01	k: 3279920	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
ZNF479   3280000 perm   4569 sec   (718 perm/sec)   p_kst 3.048780e-07   p_cons 9.999756e-01   p_joint 2.439024e-06

Joint ci ratio: 1.306665e+00	ci left: 1.049798e-06	ci right 4.791237e-06	k: 8	n:3290000
Cons ci ratio: 1.078952e-05	ci left: 9.999694e-01	ci right 9.999804e-01	k: 3289919	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
ZNF479   3290000 perm   4597 sec   (716 perm/sec)   p_kst 3.039514e-07   p_cons 9.999754e-01   p_joint 2.431611e-06

Joint ci ratio: 1.306665e+00	ci left: 1.046616e-06	ci right 4.776718e-06	k: 8	n:3300000
Cons ci ratio: 1.075683e-05	ci left: 9.999695e-01	ci right 9.999805e-01	k: 3299919	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
ZNF479   3300000 perm   4623 sec   (714 perm/sec)   p_kst 3.030303e-07   p_cons 9.999755e-01   p_joint 2.424242e-06

Joint ci ratio: 1.306665e+00	ci left: 1.043454e-06	ci right 4.762287e-06	k: 8	n:3310000
Cons ci ratio: 1.072433e-05	ci left: 9.999696e-01	ci right 9.999806e-01	k: 3309919	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
ZNF479   3310000 perm   4649 sec   (712 perm/sec)   p_kst 3.021148e-07   p_cons 9.999755e-01   p_joint 2.416918e-06

Joint ci ratio: 1.306665e+00	ci left: 1.040311e-06	ci right 4.747943e-06	k: 8	n:3320000
Cons ci ratio: 1.069202e-05	ci left: 9.999697e-01	ci right 9.999806e-01	k: 3319919	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
ZNF479   3320000 perm   4675 sec   (710 perm/sec)   p_kst 3.012048e-07   p_cons 9.999756e-01   p_joint 2.409639e-06

Joint ci ratio: 1.306665e+00	ci left: 1.037187e-06	ci right 4.733685e-06	k: 8	n:3330000
Cons ci ratio: 1.072472e-05	ci left: 9.999694e-01	ci right 9.999804e-01	k: 3329918	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
ZNF479   3330000 perm   4701 sec   (708 perm/sec)   p_kst 3.003003e-07   p_cons 9.999754e-01   p_joint 2.402402e-06

Joint ci ratio: 1.306665e+00	ci left: 1.034082e-06	ci right 4.719512e-06	k: 8	n:3340000
Cons ci ratio: 1.069261e-05	ci left: 9.999695e-01	ci right 9.999805e-01	k: 3339918	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
ZNF479   3340000 perm   4726 sec   (707 perm/sec)   p_kst 2.994012e-07   p_cons 9.999754e-01   p_joint 2.395210e-06

Joint ci ratio: 1.306665e+00	ci left: 1.030995e-06	ci right 4.705424e-06	k: 8	n:3350000
Cons ci ratio: 1.072472e-05	ci left: 9.999693e-01	ci right 9.999803e-01	k: 3349917	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
ZNF479   3350000 perm   4751 sec   (705 perm/sec)   p_kst 2.985075e-07   p_cons 9.999752e-01   p_joint 2.388060e-06

Joint ci ratio: 1.306665e+00	ci left: 1.027927e-06	ci right 4.691420e-06	k: 8	n:3360000
Cons ci ratio: 1.069280e-05	ci left: 9.999694e-01	ci right 9.999803e-01	k: 3359917	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
ZNF479   3360000 perm   4777 sec   (703 perm/sec)   p_kst 2.976190e-07   p_cons 9.999753e-01   p_joint 2.380952e-06

Joint ci ratio: 1.306665e+00	ci left: 1.024877e-06	ci right 4.677499e-06	k: 8	n:3370000
Cons ci ratio: 1.066107e-05	ci left: 9.999695e-01	ci right 9.999804e-01	k: 3369917	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
ZNF479   3370000 perm   4803 sec   (702 perm/sec)   p_kst 2.967359e-07   p_cons 9.999754e-01   p_joint 2.373887e-06

Joint ci ratio: 1.306665e+00	ci left: 1.021844e-06	ci right 4.663660e-06	k: 8	n:3380000
Cons ci ratio: 1.062953e-05	ci left: 9.999696e-01	ci right 9.999804e-01	k: 3379917	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
ZNF479   3380000 perm   4829 sec   (700 perm/sec)   p_kst 2.958580e-07   p_cons 9.999754e-01   p_joint 2.366864e-06

Joint ci ratio: 1.306665e+00	ci left: 1.018830e-06	ci right 4.649903e-06	k: 8	n:3390000
Cons ci ratio: 1.059817e-05	ci left: 9.999696e-01	ci right 9.999805e-01	k: 3389917	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
ZNF479   3390000 perm   4854 sec   (698 perm/sec)   p_kst 2.949853e-07   p_cons 9.999755e-01   p_joint 2.359882e-06

Joint ci ratio: 1.306665e+00	ci left: 1.015834e-06	ci right 4.636227e-06	k: 8	n:3400000
Cons ci ratio: 1.056700e-05	ci left: 9.999697e-01	ci right 9.999806e-01	k: 3399917	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
ZNF479   3400000 perm   4880 sec   (697 perm/sec)   p_kst 2.941176e-07   p_cons 9.999756e-01   p_joint 2.352941e-06

Joint ci ratio: 1.306665e+00	ci left: 1.012855e-06	ci right 4.622631e-06	k: 8	n:3410000
Cons ci ratio: 1.053601e-05	ci left: 9.999698e-01	ci right 9.999806e-01	k: 3409917	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
ZNF479   3410000 perm   4905 sec   (695 perm/sec)   p_kst 2.932551e-07   p_cons 9.999757e-01   p_joint 2.346041e-06

Joint ci ratio: 1.306665e+00	ci left: 1.009893e-06	ci right 4.609114e-06	k: 8	n:3420000
Cons ci ratio: 1.050521e-05	ci left: 9.999699e-01	ci right 9.999807e-01	k: 3419917	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
ZNF479   3420000 perm   4931 sec   (694 perm/sec)   p_kst 2.923977e-07   p_cons 9.999757e-01   p_joint 2.339181e-06

Joint ci ratio: 1.306665e+00	ci left: 1.006949e-06	ci right 4.595677e-06	k: 8	n:3430000
Cons ci ratio: 1.047458e-05	ci left: 9.999700e-01	ci right 9.999807e-01	k: 3429917	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
ZNF479   3430000 perm   4957 sec   (692 perm/sec)   p_kst 2.915452e-07   p_cons 9.999758e-01   p_joint 2.332362e-06

Joint ci ratio: 1.306665e+00	ci left: 1.004021e-06	ci right 4.582317e-06	k: 8	n:3440000
Cons ci ratio: 1.044413e-05	ci left: 9.999701e-01	ci right 9.999808e-01	k: 3439917	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
ZNF479   3440000 perm   4983 sec   (690 perm/sec)   p_kst 2.906977e-07   p_cons 9.999759e-01   p_joint 2.325581e-06

Joint ci ratio: 1.306665e+00	ci left: 1.001111e-06	ci right 4.569035e-06	k: 8	n:3450000
Cons ci ratio: 1.041386e-05	ci left: 9.999702e-01	ci right 9.999808e-01	k: 3449917	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
ZNF479   3450000 perm   5009 sec   (689 perm/sec)   p_kst 2.898551e-07   p_cons 9.999759e-01   p_joint 2.318841e-06

Joint ci ratio: 1.306665e+00	ci left: 9.982179e-07	ci right 4.555830e-06	k: 8	n:3460000
Cons ci ratio: 1.044538e-05	ci left: 9.999699e-01	ci right 9.999806e-01	k: 3459916	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
ZNF479   3460000 perm   5035 sec   (687 perm/sec)   p_kst 2.890173e-07   p_cons 9.999757e-01   p_joint 2.312139e-06

Joint ci ratio: 1.306665e+00	ci left: 9.953412e-07	ci right 4.542701e-06	k: 8	n:3470000
Cons ci ratio: 1.047637e-05	ci left: 9.999697e-01	ci right 9.999804e-01	k: 3469915	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
ZNF479   3470000 perm   5061 sec   (686 perm/sec)   p_kst 2.881844e-07   p_cons 9.999755e-01   p_joint 2.305476e-06

Joint ci ratio: 1.306665e+00	ci left: 9.924810e-07	ci right 4.529647e-06	k: 8	n:3480000
Cons ci ratio: 1.044627e-05	ci left: 9.999698e-01	ci right 9.999805e-01	k: 3479915	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
ZNF479   3480000 perm   5088 sec   (684 perm/sec)   p_kst 2.873563e-07   p_cons 9.999756e-01   p_joint 2.298851e-06

Joint ci ratio: 1.306665e+00	ci left: 9.896372e-07	ci right 4.516668e-06	k: 8	n:3490000
Cons ci ratio: 1.041633e-05	ci left: 9.999699e-01	ci right 9.999805e-01	k: 3489915	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
ZNF479   3490000 perm   5114 sec   (682 perm/sec)   p_kst 2.865330e-07   p_cons 9.999756e-01   p_joint 2.292264e-06

Joint ci ratio: 1.306665e+00	ci left: 9.868097e-07	ci right 4.503763e-06	k: 8	n:3500000
Cons ci ratio: 1.038657e-05	ci left: 9.999700e-01	ci right 9.999806e-01	k: 3499915	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
ZNF479   3500000 perm   5140 sec   (681 perm/sec)   p_kst 2.857143e-07   p_cons 9.999757e-01   p_joint 2.285714e-06

Joint ci ratio: 1.306665e+00	ci left: 9.839983e-07	ci right 4.490932e-06	k: 8	n:3510000
Cons ci ratio: 1.041702e-05	ci left: 9.999697e-01	ci right 9.999804e-01	k: 3509914	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
ZNF479   3510000 perm   5167 sec   (679 perm/sec)   p_kst 2.849003e-07   p_cons 9.999755e-01   p_joint 2.279202e-06

Joint ci ratio: 1.306665e+00	ci left: 9.812028e-07	ci right 4.478174e-06	k: 8	n:3520000
Cons ci ratio: 1.044696e-05	ci left: 9.999695e-01	ci right 9.999802e-01	k: 3519913	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
ZNF479   3520000 perm   5194 sec   (678 perm/sec)   p_kst 2.840909e-07   p_cons 9.999753e-01   p_joint 2.272727e-06

Joint ci ratio: 1.306665e+00	ci left: 9.784232e-07	ci right 4.465488e-06	k: 8	n:3530000
Cons ci ratio: 1.041736e-05	ci left: 9.999696e-01	ci right 9.999803e-01	k: 3529913	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
ZNF479   3530000 perm   5220 sec   (676 perm/sec)   p_kst 2.832861e-07   p_cons 9.999754e-01   p_joint 2.266289e-06

Joint ci ratio: 1.131604e+00	ci left: 1.551176e-06	ci right 5.559891e-06	k: 11	n:3540000
Cons ci ratio: 1.038794e-05	ci left: 9.999697e-01	ci right 9.999803e-01	k: 3539913	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
ZNF479   3540000 perm   5247 sec   (675 perm/sec)   p_kst 2.824859e-07   p_cons 9.999754e-01   p_joint 3.107345e-06

Joint ci ratio: 1.131604e+00	ci left: 1.546807e-06	ci right 5.544229e-06	k: 11	n:3550000
Cons ci ratio: 1.035867e-05	ci left: 9.999698e-01	ci right 9.999804e-01	k: 3549913	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
ZNF479   3550000 perm   5274 sec   (673 perm/sec)   p_kst 2.816901e-07   p_cons 9.999755e-01   p_joint 3.098592e-06

Joint ci ratio: 1.131604e+00	ci left: 1.542462e-06	ci right 5.528656e-06	k: 11	n:3560000
Cons ci ratio: 1.032958e-05	ci left: 9.999699e-01	ci right 9.999804e-01	k: 3559913	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
ZNF479   3560000 perm   5301 sec   (672 perm/sec)   p_kst 2.808989e-07   p_cons 9.999756e-01   p_joint 3.089888e-06

Joint ci ratio: 1.131604e+00	ci left: 1.538141e-06	ci right 5.513169e-06	k: 11	n:3570000
Cons ci ratio: 1.030064e-05	ci left: 9.999699e-01	ci right 9.999805e-01	k: 3569913	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
ZNF479   3570000 perm   5328 sec   (670 perm/sec)   p_kst 2.801120e-07   p_cons 9.999756e-01   p_joint 3.081232e-06

Joint ci ratio: 1.131604e+00	ci left: 1.533845e-06	ci right 5.497769e-06	k: 11	n:3580000
Cons ci ratio: 1.027187e-05	ci left: 9.999700e-01	ci right 9.999805e-01	k: 3579913	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
ZNF479   3580000 perm   5355 sec   (669 perm/sec)   p_kst 2.793296e-07   p_cons 9.999757e-01   p_joint 3.072626e-06

Joint ci ratio: 1.131604e+00	ci left: 1.529572e-06	ci right 5.482455e-06	k: 11	n:3590000
Cons ci ratio: 1.024325e-05	ci left: 9.999701e-01	ci right 9.999806e-01	k: 3589913	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
ZNF479   3590000 perm   5382 sec   (667 perm/sec)   p_kst 2.785515e-07   p_cons 9.999758e-01   p_joint 3.064067e-06

Joint ci ratio: 1.131604e+00	ci left: 1.525323e-06	ci right 5.467226e-06	k: 11	n:3600000
Cons ci ratio: 1.021480e-05	ci left: 9.999702e-01	ci right 9.999806e-01	k: 3599913	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
ZNF479   3600000 perm   5410 sec   (665 perm/sec)   p_kst 2.777778e-07   p_cons 9.999758e-01   p_joint 3.055556e-06

Joint ci ratio: 1.131604e+00	ci left: 1.521098e-06	ci right 5.452082e-06	k: 11	n:3610000
Cons ci ratio: 1.018650e-05	ci left: 9.999703e-01	ci right 9.999807e-01	k: 3609913	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
ZNF479   3610000 perm   5437 sec   (664 perm/sec)   p_kst 2.770083e-07   p_cons 9.999759e-01   p_joint 3.047091e-06

Joint ci ratio: 1.131604e+00	ci left: 1.516896e-06	ci right 5.437021e-06	k: 11	n:3620000
Cons ci ratio: 1.015836e-05	ci left: 9.999704e-01	ci right 9.999808e-01	k: 3619913	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
ZNF479   3620000 perm   5465 sec   (662 perm/sec)   p_kst 2.762431e-07   p_cons 9.999760e-01   p_joint 3.038674e-06

Joint ci ratio: 1.131605e+00	ci left: 1.512717e-06	ci right 5.422043e-06	k: 11	n:3630000
Cons ci ratio: 1.018778e-05	ci left: 9.999701e-01	ci right 9.999806e-01	k: 3629912	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
ZNF479   3630000 perm   5492 sec   (661 perm/sec)   p_kst 2.754821e-07   p_cons 9.999758e-01   p_joint 3.030303e-06

Joint ci ratio: 1.131605e+00	ci left: 1.508561e-06	ci right 5.407147e-06	k: 11	n:3640000
Cons ci ratio: 1.015979e-05	ci left: 9.999702e-01	ci right 9.999806e-01	k: 3639912	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
ZNF479   3640000 perm   5520 sec   (659 perm/sec)   p_kst 2.747253e-07   p_cons 9.999758e-01   p_joint 3.021978e-06

Joint ci ratio: 1.131605e+00	ci left: 1.504428e-06	ci right 5.392333e-06	k: 11	n:3650000
Cons ci ratio: 1.013195e-05	ci left: 9.999703e-01	ci right 9.999807e-01	k: 3649912	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
ZNF479   3650000 perm   5547 sec   (658 perm/sec)   p_kst 2.739726e-07   p_cons 9.999759e-01   p_joint 3.013699e-06

Joint ci ratio: 1.131605e+00	ci left: 1.500318e-06	ci right 5.377600e-06	k: 11	n:3660000
Cons ci ratio: 1.016088e-05	ci left: 9.999701e-01	ci right 9.999805e-01	k: 3659911	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
ZNF479   3660000 perm   5575 sec   (656 perm/sec)   p_kst 2.732240e-07   p_cons 9.999757e-01   p_joint 3.005464e-06

Joint ci ratio: 1.131605e+00	ci left: 1.496230e-06	ci right 5.362947e-06	k: 11	n:3670000
Cons ci ratio: 1.013319e-05	ci left: 9.999702e-01	ci right 9.999805e-01	k: 3669911	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
ZNF479   3670000 perm   5603 sec   (655 perm/sec)   p_kst 2.724796e-07   p_cons 9.999757e-01   p_joint 2.997275e-06

Joint ci ratio: 1.131605e+00	ci left: 1.492164e-06	ci right 5.348374e-06	k: 11	n:3680000
Cons ci ratio: 1.010566e-05	ci left: 9.999702e-01	ci right 9.999806e-01	k: 3679911	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
ZNF479   3680000 perm   5632 sec   (653 perm/sec)   p_kst 2.717391e-07   p_cons 9.999758e-01   p_joint 2.989130e-06

Joint ci ratio: 1.131605e+00	ci left: 1.488120e-06	ci right 5.333879e-06	k: 11	n:3690000
Cons ci ratio: 1.007827e-05	ci left: 9.999703e-01	ci right 9.999806e-01	k: 3689911	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
ZNF479   3690000 perm   5660 sec   (652 perm/sec)   p_kst 2.710027e-07   p_cons 9.999759e-01   p_joint 2.981030e-06

Joint ci ratio: 1.131605e+00	ci left: 1.484098e-06	ci right 5.319464e-06	k: 11	n:3700000
Cons ci ratio: 1.005103e-05	ci left: 9.999704e-01	ci right 9.999807e-01	k: 3699911	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
ZNF479   3700000 perm   5688 sec   (651 perm/sec)   p_kst 2.702703e-07   p_cons 9.999759e-01   p_joint 2.972973e-06

Joint ci ratio: 1.131605e+00	ci left: 1.480098e-06	ci right 5.305125e-06	k: 11	n:3710000
Cons ci ratio: 1.002394e-05	ci left: 9.999705e-01	ci right 9.999807e-01	k: 3709911	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
ZNF479   3710000 perm   5716 sec   (649 perm/sec)   p_kst 2.695418e-07   p_cons 9.999760e-01   p_joint 2.964960e-06

Joint ci ratio: 1.131605e+00	ci left: 1.476119e-06	ci right 5.290864e-06	k: 11	n:3720000
Cons ci ratio: 9.996992e-06	ci left: 9.999706e-01	ci right 9.999808e-01	k: 3719911	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
ZNF479   3720000 perm   5743 sec   (648 perm/sec)   p_kst 2.688172e-07   p_cons 9.999761e-01   p_joint 2.956989e-06

Joint ci ratio: 1.131605e+00	ci left: 1.472162e-06	ci right 5.276680e-06	k: 11	n:3730000
Cons ci ratio: 9.970190e-06	ci left: 9.999706e-01	ci right 9.999808e-01	k: 3729911	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
ZNF479   3730000 perm   5771 sec   (646 perm/sec)   p_kst 2.680965e-07   p_cons 9.999761e-01   p_joint 2.949062e-06

Joint ci ratio: 1.131605e+00	ci left: 1.468226e-06	ci right 5.262571e-06	k: 11	n:3740000
Cons ci ratio: 9.943532e-06	ci left: 9.999707e-01	ci right 9.999809e-01	k: 3739911	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
ZNF479   3740000 perm   5799 sec   (645 perm/sec)   p_kst 2.673797e-07   p_cons 9.999762e-01   p_joint 2.941176e-06

Joint ci ratio: 1.131605e+00	ci left: 1.464310e-06	ci right 5.248538e-06	k: 11	n:3750000
Cons ci ratio: 9.917015e-06	ci left: 9.999708e-01	ci right 9.999809e-01	k: 3749911	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
ZNF479   3750000 perm   5827 sec   (644 perm/sec)   p_kst 2.666667e-07   p_cons 9.999763e-01   p_joint 2.933333e-06

Joint ci ratio: 1.131605e+00	ci left: 1.460416e-06	ci right 5.234579e-06	k: 11	n:3760000
Cons ci ratio: 9.890640e-06	ci left: 9.999709e-01	ci right 9.999810e-01	k: 3759911	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
ZNF479   3760000 perm   5855 sec   (642 perm/sec)   p_kst 2.659574e-07   p_cons 9.999763e-01   p_joint 2.925532e-06

Joint ci ratio: 1.131605e+00	ci left: 1.456542e-06	ci right 5.220694e-06	k: 11	n:3770000
Cons ci ratio: 9.864404e-06	ci left: 9.999709e-01	ci right 9.999810e-01	k: 3769911	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
ZNF479   3770000 perm   5884 sec   (641 perm/sec)   p_kst 2.652520e-07   p_cons 9.999764e-01   p_joint 2.917772e-06

Joint ci ratio: 1.131605e+00	ci left: 1.452689e-06	ci right 5.206883e-06	k: 11	n:3780000
Cons ci ratio: 9.838308e-06	ci left: 9.999710e-01	ci right 9.999811e-01	k: 3779911	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
ZNF479   3780000 perm   5913 sec   (639 perm/sec)   p_kst 2.645503e-07   p_cons 9.999765e-01   p_joint 2.910053e-06

Joint ci ratio: 1.131605e+00	ci left: 1.448856e-06	ci right 5.193144e-06	k: 11	n:3790000
Cons ci ratio: 9.812349e-06	ci left: 9.999711e-01	ci right 9.999811e-01	k: 3789911	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
ZNF479   3790000 perm   5942 sec   (638 perm/sec)   p_kst 2.638522e-07   p_cons 9.999765e-01   p_joint 2.902375e-06

Joint ci ratio: 1.131605e+00	ci left: 1.445043e-06	ci right 5.179478e-06	k: 11	n:3800000
Cons ci ratio: 9.786527e-06	ci left: 9.999712e-01	ci right 9.999812e-01	k: 3799911	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
ZNF479   3800000 perm   5981 sec   (635 perm/sec)   p_kst 2.631579e-07   p_cons 9.999766e-01   p_joint 2.894737e-06

Joint ci ratio: 1.131605e+00	ci left: 1.441250e-06	ci right 5.165883e-06	k: 11	n:3810000
Cons ci ratio: 9.760840e-06	ci left: 9.999713e-01	ci right 9.999812e-01	k: 3809911	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
ZNF479   3810000 perm   6013 sec   (634 perm/sec)   p_kst 2.624672e-07   p_cons 9.999766e-01   p_joint 2.887139e-06

Joint ci ratio: 1.131605e+00	ci left: 1.437477e-06	ci right 5.152360e-06	k: 11	n:3820000
Cons ci ratio: 9.896216e-06	ci left: 9.999705e-01	ci right 9.999806e-01	k: 3819908	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
ZNF479   3820000 perm   6043 sec   (632 perm/sec)   p_kst 2.617801e-07   p_cons 9.999759e-01   p_joint 2.879581e-06

Joint ci ratio: 1.131605e+00	ci left: 1.433724e-06	ci right 5.138908e-06	k: 11	n:3830000
Cons ci ratio: 9.870377e-06	ci left: 9.999705e-01	ci right 9.999806e-01	k: 3829908	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
ZNF479   3830000 perm   6071 sec   (631 perm/sec)   p_kst 2.610966e-07   p_cons 9.999760e-01   p_joint 2.872063e-06

Joint ci ratio: 1.131605e+00	ci left: 1.429991e-06	ci right 5.125525e-06	k: 11	n:3840000
Cons ci ratio: 9.844673e-06	ci left: 9.999706e-01	ci right 9.999807e-01	k: 3839908	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
ZNF479   3840000 perm   6100 sec   (630 perm/sec)   p_kst 2.604167e-07   p_cons 9.999760e-01   p_joint 2.864583e-06

Joint ci ratio: 1.131605e+00	ci left: 1.426276e-06	ci right 5.112212e-06	k: 11	n:3850000
Cons ci ratio: 9.819102e-06	ci left: 9.999707e-01	ci right 9.999807e-01	k: 3849908	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
ZNF479   3850000 perm   6129 sec   (628 perm/sec)   p_kst 2.597403e-07   p_cons 9.999761e-01   p_joint 2.857143e-06

Joint ci ratio: 1.131605e+00	ci left: 1.422581e-06	ci right 5.098968e-06	k: 11	n:3860000
Cons ci ratio: 9.793664e-06	ci left: 9.999708e-01	ci right 9.999808e-01	k: 3859908	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
ZNF479   3860000 perm   6158 sec   (627 perm/sec)   p_kst 2.590674e-07   p_cons 9.999762e-01   p_joint 2.849741e-06

Joint ci ratio: 1.131605e+00	ci left: 1.418905e-06	ci right 5.085792e-06	k: 11	n:3870000
Cons ci ratio: 9.768357e-06	ci left: 9.999708e-01	ci right 9.999808e-01	k: 3869908	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
ZNF479   3870000 perm   6187 sec   (626 perm/sec)   p_kst 2.583979e-07   p_cons 9.999762e-01   p_joint 2.842377e-06

Joint ci ratio: 1.131605e+00	ci left: 1.415248e-06	ci right 5.072685e-06	k: 11	n:3880000
Cons ci ratio: 9.743180e-06	ci left: 9.999709e-01	ci right 9.999809e-01	k: 3879908	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
ZNF479   3880000 perm   6216 sec   (624 perm/sec)   p_kst 2.577320e-07   p_cons 9.999763e-01   p_joint 2.835052e-06

Joint ci ratio: 1.131605e+00	ci left: 1.411610e-06	ci right 5.059644e-06	k: 11	n:3890000
Cons ci ratio: 9.718133e-06	ci left: 9.999710e-01	ci right 9.999809e-01	k: 3889908	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
ZNF479   3890000 perm   6246 sec   (623 perm/sec)   p_kst 2.570694e-07   p_cons 9.999763e-01   p_joint 2.827763e-06

Joint ci ratio: 1.131605e+00	ci left: 1.407991e-06	ci right 5.046671e-06	k: 11	n:3900000
Cons ci ratio: 9.693215e-06	ci left: 9.999711e-01	ci right 9.999810e-01	k: 3899908	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
ZNF479   3900000 perm   6275 sec   (622 perm/sec)   p_kst 2.564103e-07   p_cons 9.999764e-01   p_joint 2.820513e-06

Joint ci ratio: 1.131605e+00	ci left: 1.404390e-06	ci right 5.033764e-06	k: 11	n:3910000
Cons ci ratio: 9.668424e-06	ci left: 9.999711e-01	ci right 9.999810e-01	k: 3909908	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
ZNF479   3910000 perm   6304 sec   (620 perm/sec)   p_kst 2.557545e-07   p_cons 9.999765e-01   p_joint 2.813299e-06

Joint ci ratio: 1.131605e+00	ci left: 1.400807e-06	ci right 5.020923e-06	k: 11	n:3920000
Cons ci ratio: 9.643759e-06	ci left: 9.999712e-01	ci right 9.999811e-01	k: 3919908	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
ZNF479   3920000 perm   6333 sec   (619 perm/sec)   p_kst 2.551020e-07   p_cons 9.999765e-01   p_joint 2.806122e-06

Joint ci ratio: 1.131605e+00	ci left: 1.397243e-06	ci right 5.008147e-06	k: 11	n:3930000
Cons ci ratio: 9.619220e-06	ci left: 9.999713e-01	ci right 9.999811e-01	k: 3929908	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
ZNF479   3930000 perm   6363 sec   (618 perm/sec)   p_kst 2.544529e-07   p_cons 9.999766e-01   p_joint 2.798982e-06

Joint ci ratio: 1.131605e+00	ci left: 1.393696e-06	ci right 4.995436e-06	k: 11	n:3940000
Cons ci ratio: 9.594805e-06	ci left: 9.999714e-01	ci right 9.999812e-01	k: 3939908	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
ZNF479   3940000 perm   6392 sec   (616 perm/sec)   p_kst 2.538071e-07   p_cons 9.999766e-01   p_joint 2.791878e-06

Joint ci ratio: 1.087210e+00	ci left: 1.569767e-06	ci right 5.306724e-06	k: 12	n:3950000
Cons ci ratio: 9.570514e-06	ci left: 9.999714e-01	ci right 9.999812e-01	k: 3949908	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
ZNF479   3950000 perm   6421 sec   (615 perm/sec)   p_kst 2.531646e-07   p_cons 9.999767e-01   p_joint 3.037975e-06

Joint ci ratio: 1.087210e+00	ci left: 1.565803e-06	ci right 5.293324e-06	k: 12	n:3960000
Cons ci ratio: 9.546346e-06	ci left: 9.999715e-01	ci right 9.999813e-01	k: 3959908	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
ZNF479   3960000 perm   6450 sec   (614 perm/sec)   p_kst 2.525253e-07   p_cons 9.999768e-01   p_joint 3.030303e-06

Joint ci ratio: 1.087210e+00	ci left: 1.561859e-06	ci right 5.279990e-06	k: 12	n:3970000
Cons ci ratio: 9.573359e-06	ci left: 9.999713e-01	ci right 9.999811e-01	k: 3969907	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
ZNF479   3970000 perm   6480 sec   (613 perm/sec)   p_kst 2.518892e-07   p_cons 9.999766e-01   p_joint 3.022670e-06

Joint ci ratio: 1.087210e+00	ci left: 1.557934e-06	ci right 5.266724e-06	k: 12	n:3980000
Cons ci ratio: 9.650361e-06	ci left: 9.999708e-01	ci right 9.999807e-01	k: 3979905	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
ZNF479   3980000 perm   6510 sec   (611 perm/sec)   p_kst 2.512563e-07   p_cons 9.999761e-01   p_joint 3.015075e-06

Joint ci ratio: 1.087210e+00	ci left: 1.554030e-06	ci right 5.253524e-06	k: 12	n:3990000
Cons ci ratio: 9.626175e-06	ci left: 9.999709e-01	ci right 9.999807e-01	k: 3989905	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
ZNF479   3990000 perm   6540 sec   (610 perm/sec)   p_kst 2.506266e-07   p_cons 9.999762e-01   p_joint 3.007519e-06

Joint ci ratio: 1.087210e+00	ci left: 1.550145e-06	ci right 5.240390e-06	k: 12	n:4000000
Cons ci ratio: 9.602109e-06	ci left: 9.999710e-01	ci right 9.999808e-01	k: 3999905	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
ZNF479   4000000 perm   6570 sec   (609 perm/sec)   p_kst 2.500000e-07   p_cons 9.999763e-01   p_joint 3.000000e-06

Joint ci ratio: 1.087210e+00	ci left: 1.546279e-06	ci right 5.227322e-06	k: 12	n:4010000
Cons ci ratio: 9.578163e-06	ci left: 9.999710e-01	ci right 9.999808e-01	k: 4009905	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
ZNF479   4010000 perm   6600 sec   (608 perm/sec)   p_kst 2.493766e-07   p_cons 9.999763e-01   p_joint 2.992519e-06

Joint ci ratio: 1.087210e+00	ci left: 1.542433e-06	ci right 5.214319e-06	k: 12	n:4020000
Cons ci ratio: 9.554337e-06	ci left: 9.999711e-01	ci right 9.999809e-01	k: 4019905	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
ZNF479   4020000 perm   6631 sec   (606 perm/sec)   p_kst 2.487562e-07   p_cons 9.999764e-01   p_joint 2.985075e-06

Joint ci ratio: 1.087210e+00	ci left: 1.538605e-06	ci right 5.201380e-06	k: 12	n:4030000
Cons ci ratio: 9.530628e-06	ci left: 9.999712e-01	ci right 9.999809e-01	k: 4029905	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
ZNF479   4030000 perm   6661 sec   (605 perm/sec)   p_kst 2.481390e-07   p_cons 9.999764e-01   p_joint 2.977667e-06

Joint ci ratio: 1.087211e+00	ci left: 1.534797e-06	ci right 5.188505e-06	k: 12	n:4040000
Cons ci ratio: 9.507038e-06	ci left: 9.999713e-01	ci right 9.999810e-01	k: 4039905	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
ZNF479   4040000 perm   6692 sec   (604 perm/sec)   p_kst 2.475248e-07   p_cons 9.999765e-01   p_joint 2.970297e-06

Joint ci ratio: 1.087211e+00	ci left: 1.531007e-06	ci right 5.175694e-06	k: 12	n:4050000
Cons ci ratio: 9.483563e-06	ci left: 9.999713e-01	ci right 9.999810e-01	k: 4049905	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
ZNF479   4050000 perm   6722 sec   (602 perm/sec)   p_kst 2.469136e-07   p_cons 9.999765e-01   p_joint 2.962963e-06

Joint ci ratio: 1.087211e+00	ci left: 1.527236e-06	ci right 5.162946e-06	k: 12	n:4060000
Cons ci ratio: 9.509350e-06	ci left: 9.999711e-01	ci right 9.999808e-01	k: 4059904	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
ZNF479   4060000 perm   6753 sec   (601 perm/sec)   p_kst 2.463054e-07   p_cons 9.999764e-01   p_joint 2.955665e-06

Joint ci ratio: 1.087211e+00	ci left: 1.523484e-06	ci right 5.150261e-06	k: 12	n:4070000
Cons ci ratio: 9.485985e-06	ci left: 9.999712e-01	ci right 9.999809e-01	k: 4069904	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
ZNF479   4070000 perm   6783 sec   (600 perm/sec)   p_kst 2.457002e-07   p_cons 9.999764e-01   p_joint 2.948403e-06

Joint ci ratio: 1.087211e+00	ci left: 1.519750e-06	ci right 5.137638e-06	k: 12	n:4080000
Cons ci ratio: 9.462735e-06	ci left: 9.999713e-01	ci right 9.999809e-01	k: 4079904	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
ZNF479   4080000 perm   6814 sec   (599 perm/sec)   p_kst 2.450980e-07   p_cons 9.999765e-01   p_joint 2.941176e-06

Joint ci ratio: 1.087211e+00	ci left: 1.516034e-06	ci right 5.125076e-06	k: 12	n:4090000
Cons ci ratio: 9.439598e-06	ci left: 9.999713e-01	ci right 9.999810e-01	k: 4089904	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
ZNF479   4090000 perm   6845 sec   (598 perm/sec)   p_kst 2.444988e-07   p_cons 9.999765e-01   p_joint 2.933985e-06

Joint ci ratio: 1.087211e+00	ci left: 1.512336e-06	ci right 5.112576e-06	k: 12	n:4100000
Cons ci ratio: 9.416575e-06	ci left: 9.999714e-01	ci right 9.999810e-01	k: 4099904	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
ZNF479   4100000 perm   6875 sec   (596 perm/sec)   p_kst 2.439024e-07   p_cons 9.999766e-01   p_joint 2.926829e-06

Joint ci ratio: 1.087211e+00	ci left: 1.508657e-06	ci right 5.100137e-06	k: 12	n:4110000
Cons ci ratio: 9.393663e-06	ci left: 9.999715e-01	ci right 9.999811e-01	k: 4109904	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
ZNF479   4110000 perm   6906 sec   (595 perm/sec)   p_kst 2.433090e-07   p_cons 9.999766e-01   p_joint 2.919708e-06

Joint ci ratio: 1.087211e+00	ci left: 1.504995e-06	ci right 5.087758e-06	k: 12	n:4120000
Cons ci ratio: 9.370863e-06	ci left: 9.999715e-01	ci right 9.999811e-01	k: 4119904	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
ZNF479   4120000 perm   6936 sec   (594 perm/sec)   p_kst 2.427184e-07   p_cons 9.999767e-01   p_joint 2.912621e-06

Joint ci ratio: 1.087211e+00	ci left: 1.501351e-06	ci right 5.075439e-06	k: 12	n:4130000
Cons ci ratio: 9.348173e-06	ci left: 9.999716e-01	ci right 9.999812e-01	k: 4129904	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
ZNF479   4130000 perm   6968 sec   (593 perm/sec)   p_kst 2.421308e-07   p_cons 9.999768e-01   p_joint 2.905569e-06

Joint ci ratio: 1.087211e+00	ci left: 1.497724e-06	ci right 5.063179e-06	k: 12	n:4140000
Cons ci ratio: 9.325592e-06	ci left: 9.999717e-01	ci right 9.999812e-01	k: 4139904	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
ZNF479   4140000 perm   7000 sec   (591 perm/sec)   p_kst 2.415459e-07   p_cons 9.999768e-01   p_joint 2.898551e-06

Joint ci ratio: 1.087211e+00	ci left: 1.494115e-06	ci right 5.050979e-06	k: 12	n:4150000
Cons ci ratio: 9.350953e-06	ci left: 9.999715e-01	ci right 9.999810e-01	k: 4149903	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
ZNF479   4150000 perm   7031 sec   (590 perm/sec)   p_kst 2.409639e-07   p_cons 9.999766e-01   p_joint 2.891566e-06

Joint ci ratio: 1.087211e+00	ci left: 1.490524e-06	ci right 5.038837e-06	k: 12	n:4160000
Cons ci ratio: 9.328475e-06	ci left: 9.999716e-01	ci right 9.999811e-01	k: 4159903	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
ZNF479   4160000 perm   7062 sec   (589 perm/sec)   p_kst 2.403846e-07   p_cons 9.999767e-01   p_joint 2.884615e-06

Joint ci ratio: 1.087211e+00	ci left: 1.486949e-06	ci right 5.026754e-06	k: 12	n:4170000
Cons ci ratio: 9.306104e-06	ci left: 9.999716e-01	ci right 9.999811e-01	k: 4169903	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
ZNF479   4170000 perm   7093 sec   (588 perm/sec)   p_kst 2.398082e-07   p_cons 9.999767e-01   p_joint 2.877698e-06

Joint ci ratio: 1.087211e+00	ci left: 1.483392e-06	ci right 5.014728e-06	k: 12	n:4180000
Cons ci ratio: 9.283840e-06	ci left: 9.999717e-01	ci right 9.999812e-01	k: 4179903	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
ZNF479   4180000 perm   7125 sec   (587 perm/sec)   p_kst 2.392344e-07   p_cons 9.999768e-01   p_joint 2.870813e-06

Joint ci ratio: 1.087211e+00	ci left: 1.479852e-06	ci right 5.002760e-06	k: 12	n:4190000
Cons ci ratio: 9.261683e-06	ci left: 9.999718e-01	ci right 9.999812e-01	k: 4189903	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
ZNF479   4190000 perm   7156 sec   (585 perm/sec)   p_kst 2.386635e-07   p_cons 9.999768e-01   p_joint 2.863962e-06

Joint ci ratio: 1.087211e+00	ci left: 1.476328e-06	ci right 4.990848e-06	k: 12	n:4200000
Cons ci ratio: 9.239631e-06	ci left: 9.999718e-01	ci right 9.999813e-01	k: 4199903	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
ZNF479   4200000 perm   7188 sec   (584 perm/sec)   p_kst 2.380952e-07   p_cons 9.999769e-01   p_joint 2.857143e-06

Joint ci ratio: 1.087211e+00	ci left: 1.472822e-06	ci right 4.978994e-06	k: 12	n:4210000
Cons ci ratio: 9.217684e-06	ci left: 9.999719e-01	ci right 9.999813e-01	k: 4209903	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
ZNF479   4210000 perm   7219 sec   (583 perm/sec)   p_kst 2.375297e-07   p_cons 9.999770e-01   p_joint 2.850356e-06

Joint ci ratio: 1.087211e+00	ci left: 1.469331e-06	ci right 4.967195e-06	k: 12	n:4220000
Cons ci ratio: 9.195841e-06	ci left: 9.999720e-01	ci right 9.999814e-01	k: 4219903	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
ZNF479   4220000 perm   7251 sec   (582 perm/sec)   p_kst 2.369668e-07   p_cons 9.999770e-01   p_joint 2.843602e-06

Joint ci ratio: 1.087211e+00	ci left: 1.465858e-06	ci right 4.955452e-06	k: 12	n:4230000
Cons ci ratio: 9.174101e-06	ci left: 9.999720e-01	ci right 9.999814e-01	k: 4229903	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
ZNF479   4230000 perm   7282 sec   (581 perm/sec)   p_kst 2.364066e-07   p_cons 9.999771e-01   p_joint 2.836879e-06

Joint ci ratio: 1.087211e+00	ci left: 1.462401e-06	ci right 4.943765e-06	k: 12	n:4240000
Cons ci ratio: 9.152464e-06	ci left: 9.999721e-01	ci right 9.999814e-01	k: 4239903	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
ZNF479   4240000 perm   7314 sec   (580 perm/sec)   p_kst 2.358491e-07   p_cons 9.999771e-01   p_joint 2.830189e-06

Joint ci ratio: 1.087211e+00	ci left: 1.458960e-06	ci right 4.932132e-06	k: 12	n:4250000
Cons ci ratio: 9.130928e-06	ci left: 9.999722e-01	ci right 9.999815e-01	k: 4249903	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
ZNF479   4250000 perm   7346 sec   (579 perm/sec)   p_kst 2.352941e-07   p_cons 9.999772e-01   p_joint 2.823529e-06

Joint ci ratio: 1.087211e+00	ci left: 1.455535e-06	ci right 4.920555e-06	k: 12	n:4260000
Cons ci ratio: 9.109494e-06	ci left: 9.999722e-01	ci right 9.999815e-01	k: 4259903	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
ZNF479   4260000 perm   7378 sec   (577 perm/sec)   p_kst 2.347418e-07   p_cons 9.999772e-01   p_joint 2.816901e-06

Joint ci ratio: 1.087211e+00	ci left: 1.452126e-06	ci right 4.909031e-06	k: 12	n:4270000
Cons ci ratio: 9.088160e-06	ci left: 9.999723e-01	ci right 9.999816e-01	k: 4269903	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
ZNF479   4270000 perm   7411 sec   (576 perm/sec)   p_kst 2.341920e-07   p_cons 9.999773e-01   p_joint 2.810304e-06

Joint ci ratio: 1.087211e+00	ci left: 1.448733e-06	ci right 4.897561e-06	k: 12	n:4280000
Cons ci ratio: 9.113069e-06	ci left: 9.999721e-01	ci right 9.999814e-01	k: 4279902	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
ZNF479   4280000 perm   7443 sec   (575 perm/sec)   p_kst 2.336449e-07   p_cons 9.999771e-01   p_joint 2.803738e-06

Joint ci ratio: 1.087211e+00	ci left: 1.445356e-06	ci right 4.886145e-06	k: 12	n:4290000
Cons ci ratio: 9.091826e-06	ci left: 9.999722e-01	ci right 9.999815e-01	k: 4289902	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
ZNF479   4290000 perm   7476 sec   (574 perm/sec)   p_kst 2.331002e-07   p_cons 9.999772e-01   p_joint 2.797203e-06

Joint ci ratio: 1.087211e+00	ci left: 1.441995e-06	ci right 4.874782e-06	k: 12	n:4300000
Cons ci ratio: 9.070682e-06	ci left: 9.999722e-01	ci right 9.999815e-01	k: 4299902	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
ZNF479   4300000 perm   7508 sec   (573 perm/sec)   p_kst 2.325581e-07   p_cons 9.999772e-01   p_joint 2.790698e-06

Joint ci ratio: 1.087211e+00	ci left: 1.438649e-06	ci right 4.863472e-06	k: 12	n:4310000
Cons ci ratio: 9.049636e-06	ci left: 9.999723e-01	ci right 9.999815e-01	k: 4309902	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
ZNF479   4310000 perm   7543 sec   (571 perm/sec)   p_kst 2.320186e-07   p_cons 9.999773e-01   p_joint 2.784223e-06

Joint ci ratio: 1.087211e+00	ci left: 1.435319e-06	ci right 4.852214e-06	k: 12	n:4320000
Cons ci ratio: 9.028688e-06	ci left: 9.999724e-01	ci right 9.999816e-01	k: 4319902	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
ZNF479   4320000 perm   7577 sec   (570 perm/sec)   p_kst 2.314815e-07   p_cons 9.999773e-01   p_joint 2.777778e-06

Joint ci ratio: 1.047662e+00	ci left: 1.598604e-06	ci right 5.134035e-06	k: 13	n:4330000
Cons ci ratio: 9.053217e-06	ci left: 9.999722e-01	ci right 9.999814e-01	k: 4329901	n:4330000
KS ci ratio: 2.263212e+00	ci left: 5.593748e-08	ci right 1.668518e-06	k: 2	n:4330000
ZNF479   4330000 perm   7609 sec   (569 perm/sec)   p_kst 4.618938e-07   p_cons 9.999771e-01   p_joint 3.002309e-06

Joint ci ratio: 1.047662e+00	ci left: 1.594921e-06	ci right 5.122206e-06	k: 13	n:4340000
Cons ci ratio: 9.032357e-06	ci left: 9.999722e-01	ci right 9.999815e-01	k: 4339901	n:4340000
KS ci ratio: 2.263212e+00	ci left: 5.580859e-08	ci right 1.664674e-06	k: 2	n:4340000
ZNF479   4340000 perm   7642 sec   (568 perm/sec)   p_kst 4.608295e-07   p_cons 9.999772e-01   p_joint 2.995392e-06

Joint ci ratio: 1.047662e+00	ci left: 1.591254e-06	ci right 5.110430e-06	k: 13	n:4350000
Cons ci ratio: 9.056540e-06	ci left: 9.999720e-01	ci right 9.999813e-01	k: 4349900	n:4350000
KS ci ratio: 2.263212e+00	ci left: 5.568030e-08	ci right 1.660847e-06	k: 2	n:4350000
ZNF479   4350000 perm   7675 sec   (567 perm/sec)   p_kst 4.597701e-07   p_cons 9.999770e-01   p_joint 2.988506e-06

Joint ci ratio: 1.047662e+00	ci left: 1.587605e-06	ci right 5.098709e-06	k: 13	n:4360000
Cons ci ratio: 9.035767e-06	ci left: 9.999721e-01	ci right 9.999813e-01	k: 4359900	n:4360000
KS ci ratio: 2.263212e+00	ci left: 5.555259e-08	ci right 1.657037e-06	k: 2	n:4360000
ZNF479   4360000 perm   7709 sec   (566 perm/sec)   p_kst 4.587156e-07   p_cons 9.999771e-01   p_joint 2.981651e-06

Joint ci ratio: 1.047662e+00	ci left: 1.583972e-06	ci right 5.087042e-06	k: 13	n:4370000
Cons ci ratio: 9.015090e-06	ci left: 9.999722e-01	ci right 9.999814e-01	k: 4369900	n:4370000
KS ci ratio: 2.263212e+00	ci left: 5.542547e-08	ci right 1.653246e-06	k: 2	n:4370000
ZNF479   4370000 perm   7744 sec   (564 perm/sec)   p_kst 4.576659e-07   p_cons 9.999771e-01   p_joint 2.974828e-06

Joint ci ratio: 1.047662e+00	ci left: 1.580355e-06	ci right 5.075428e-06	k: 13	n:4380000
Cons ci ratio: 8.994508e-06	ci left: 9.999722e-01	ci right 9.999814e-01	k: 4379900	n:4380000
KS ci ratio: 2.263212e+00	ci left: 5.529893e-08	ci right 1.649471e-06	k: 2	n:4380000
ZNF479   4380000 perm   7778 sec   (563 perm/sec)   p_kst 4.566210e-07   p_cons 9.999772e-01   p_joint 2.968037e-06

Joint ci ratio: 1.047662e+00	ci left: 1.576755e-06	ci right 5.063866e-06	k: 13	n:4390000
Cons ci ratio: 8.974019e-06	ci left: 9.999723e-01	ci right 9.999815e-01	k: 4389900	n:4390000
KS ci ratio: 2.263212e+00	ci left: 5.517296e-08	ci right 1.645714e-06	k: 2	n:4390000
ZNF479   4390000 perm   7812 sec   (562 perm/sec)   p_kst 4.555809e-07   p_cons 9.999772e-01   p_joint 2.961276e-06

Joint ci ratio: 1.047662e+00	ci left: 1.573172e-06	ci right 5.052357e-06	k: 13	n:4400000
Cons ci ratio: 8.953623e-06	ci left: 9.999724e-01	ci right 9.999815e-01	k: 4399900	n:4400000
KS ci ratio: 2.263212e+00	ci left: 5.504757e-08	ci right 1.641973e-06	k: 2	n:4400000
ZNF479   4400000 perm   7845 sec   (561 perm/sec)   p_kst 4.545455e-07   p_cons 9.999773e-01   p_joint 2.954545e-06

Joint ci ratio: 1.047662e+00	ci left: 1.569605e-06	ci right 5.040901e-06	k: 13	n:4410000
Cons ci ratio: 8.933320e-06	ci left: 9.999724e-01	ci right 9.999816e-01	k: 4409900	n:4410000
KS ci ratio: 2.263212e+00	ci left: 5.492274e-08	ci right 1.638250e-06	k: 2	n:4410000
ZNF479   4410000 perm   7880 sec   (560 perm/sec)   p_kst 4.535147e-07   p_cons 9.999773e-01   p_joint 2.947846e-06

Joint ci ratio: 1.047662e+00	ci left: 1.566053e-06	ci right 5.029496e-06	k: 13	n:4420000
Cons ci ratio: 8.913109e-06	ci left: 9.999725e-01	ci right 9.999816e-01	k: 4419900	n:4420000
KS ci ratio: 2.263212e+00	ci left: 5.479848e-08	ci right 1.634544e-06	k: 2	n:4420000
ZNF479   4420000 perm   7914 sec   (559 perm/sec)   p_kst 4.524887e-07   p_cons 9.999774e-01   p_joint 2.941176e-06

Joint ci ratio: 1.306665e+00	ci left: 7.796464e-07	ci right 3.558279e-06	k: 8	n:4430000
Cons ci ratio: 8.892989e-06	ci left: 9.999725e-01	ci right 9.999816e-01	k: 4429900	n:4430000
KS ci ratio: 2.263212e+00	ci left: 5.467479e-08	ci right 1.630854e-06	k: 2	n:4430000
ZNF479   4430000 perm   7947 sec   (557 perm/sec)   p_kst 4.514673e-07   p_cons 9.999774e-01   p_joint 1.805869e-06

Joint ci ratio: 1.306665e+00	ci left: 7.778904e-07	ci right 3.550265e-06	k: 8	n:4440000
Cons ci ratio: 8.872959e-06	ci left: 9.999726e-01	ci right 9.999817e-01	k: 4439900	n:4440000
KS ci ratio: 2.263212e+00	ci left: 5.455164e-08	ci right 1.627181e-06	k: 2	n:4440000
ZNF479   4440000 perm   7981 sec   (556 perm/sec)   p_kst 4.504505e-07   p_cons 9.999775e-01   p_joint 1.801802e-06

Joint ci ratio: 1.306665e+00	ci left: 7.761424e-07	ci right 3.542287e-06	k: 8	n:4450000
Cons ci ratio: 9.690014e-06	ci left: 9.999678e-01	ci right 9.999776e-01	k: 4449880	n:4450000
KS ci ratio: 2.263212e+00	ci left: 5.442906e-08	ci right 1.623524e-06	k: 2	n:4450000
ZNF479   4450000 perm   8014 sec   (555 perm/sec)   p_kst 4.494382e-07   p_cons 9.999730e-01   p_joint 1.797753e-06

Joint ci ratio: 1.306665e+00	ci left: 7.744021e-07	ci right 3.534344e-06	k: 8	n:4460000
Cons ci ratio: 9.668287e-06	ci left: 9.999678e-01	ci right 9.999777e-01	k: 4459880	n:4460000
KS ci ratio: 2.263212e+00	ci left: 5.430702e-08	ci right 1.619884e-06	k: 2	n:4460000
ZNF479   4460000 perm   8048 sec   (554 perm/sec)   p_kst 4.484305e-07   p_cons 9.999731e-01   p_joint 1.793722e-06

Joint ci ratio: 1.306665e+00	ci left: 7.726697e-07	ci right 3.526437e-06	k: 8	n:4470000
Cons ci ratio: 9.646658e-06	ci left: 9.999679e-01	ci right 9.999777e-01	k: 4469880	n:4470000
KS ci ratio: 2.263212e+00	ci left: 5.418553e-08	ci right 1.616260e-06	k: 2	n:4470000
ZNF479   4470000 perm   8082 sec   (553 perm/sec)   p_kst 4.474273e-07   p_cons 9.999732e-01   p_joint 1.789709e-06

Joint ci ratio: 1.306665e+00	ci left: 7.709450e-07	ci right 3.518566e-06	k: 8	n:4480000
Cons ci ratio: 9.664817e-06	ci left: 9.999677e-01	ci right 9.999776e-01	k: 4479879	n:4480000
KS ci ratio: 2.263212e+00	ci left: 5.406458e-08	ci right 1.612653e-06	k: 2	n:4480000
ZNF479   4480000 perm   8116 sec   (552 perm/sec)   p_kst 4.464286e-07   p_cons 9.999730e-01   p_joint 1.785714e-06

Joint ci ratio: 1.306665e+00	ci left: 7.692280e-07	ci right 3.510730e-06	k: 8	n:4490000
Cons ci ratio: 9.643292e-06	ci left: 9.999678e-01	ci right 9.999776e-01	k: 4489879	n:4490000
KS ci ratio: 2.263212e+00	ci left: 5.394416e-08	ci right 1.609061e-06	k: 2	n:4490000
ZNF479   4490000 perm   8150 sec   (551 perm/sec)   p_kst 4.454343e-07   p_cons 9.999731e-01   p_joint 1.781737e-06

Joint ci ratio: 1.306665e+00	ci left: 7.675186e-07	ci right 3.502928e-06	k: 8	n:4500000
Cons ci ratio: 9.621862e-06	ci left: 9.999679e-01	ci right 9.999777e-01	k: 4499879	n:4500000
KS ci ratio: 2.263212e+00	ci left: 5.382429e-08	ci right 1.605485e-06	k: 2	n:4500000
ZNF479   4500000 perm   8184 sec   (550 perm/sec)   p_kst 4.444444e-07   p_cons 9.999731e-01   p_joint 1.777778e-06

Joint ci ratio: 1.306665e+00	ci left: 7.658167e-07	ci right 3.495161e-06	k: 8	n:4510000
Cons ci ratio: 9.600527e-06	ci left: 9.999679e-01	ci right 9.999777e-01	k: 4509879	n:4510000
KS ci ratio: 2.263212e+00	ci left: 5.370494e-08	ci right 1.601925e-06	k: 2	n:4510000
ZNF479   4510000 perm   8218 sec   (549 perm/sec)   p_kst 4.434590e-07   p_cons 9.999732e-01   p_joint 1.773836e-06

Joint ci ratio: 1.306665e+00	ci left: 7.641225e-07	ci right 3.487428e-06	k: 8	n:4520000
Cons ci ratio: 9.579287e-06	ci left: 9.999680e-01	ci right 9.999778e-01	k: 4519879	n:4520000
KS ci ratio: 2.263212e+00	ci left: 5.358613e-08	ci right 1.598381e-06	k: 2	n:4520000
ZNF479   4520000 perm   8253 sec   (548 perm/sec)   p_kst 4.424779e-07   p_cons 9.999732e-01   p_joint 1.769912e-06

Joint ci ratio: 1.306665e+00	ci left: 7.624357e-07	ci right 3.479730e-06	k: 8	n:4530000
Cons ci ratio: 9.558140e-06	ci left: 9.999681e-01	ci right 9.999778e-01	k: 4529879	n:4530000
KS ci ratio: 2.263212e+00	ci left: 5.346784e-08	ci right 1.594853e-06	k: 2	n:4530000
ZNF479   4530000 perm   8289 sec   (547 perm/sec)   p_kst 4.415011e-07   p_cons 9.999733e-01   p_joint 1.766004e-06

Joint ci ratio: 1.306665e+00	ci left: 7.607563e-07	ci right 3.472065e-06	k: 8	n:4540000
Cons ci ratio: 9.537087e-06	ci left: 9.999682e-01	ci right 9.999779e-01	k: 4539879	n:4540000
KS ci ratio: 2.263212e+00	ci left: 5.335007e-08	ci right 1.591340e-06	k: 2	n:4540000
ZNF479   4540000 perm   8323 sec   (545 perm/sec)   p_kst 4.405286e-07   p_cons 9.999733e-01   p_joint 1.762115e-06

Joint ci ratio: 1.306665e+00	ci left: 7.590843e-07	ci right 3.464434e-06	k: 8	n:4550000
Cons ci ratio: 9.516126e-06	ci left: 9.999682e-01	ci right 9.999779e-01	k: 4549879	n:4550000
KS ci ratio: 2.263212e+00	ci left: 5.323281e-08	ci right 1.587843e-06	k: 2	n:4550000
ZNF479   4550000 perm   8358 sec   (544 perm/sec)   p_kst 4.395604e-07   p_cons 9.999734e-01   p_joint 1.758242e-06

Joint ci ratio: 1.306665e+00	ci left: 7.574196e-07	ci right 3.456837e-06	k: 8	n:4560000
Cons ci ratio: 9.534093e-06	ci left: 9.999681e-01	ci right 9.999778e-01	k: 4559878	n:4560000
KS ci ratio: 2.263212e+00	ci left: 5.311607e-08	ci right 1.584360e-06	k: 2	n:4560000
ZNF479   4560000 perm   8393 sec   (543 perm/sec)   p_kst 4.385965e-07   p_cons 9.999732e-01   p_joint 1.754386e-06

Joint ci ratio: 1.306665e+00	ci left: 7.557623e-07	ci right 3.449273e-06	k: 8	n:4570000
Cons ci ratio: 9.551825e-06	ci left: 9.999679e-01	ci right 9.999776e-01	k: 4569877	n:4570000
KS ci ratio: 2.263212e+00	ci left: 5.299985e-08	ci right 1.580894e-06	k: 2	n:4570000
ZNF479   4570000 perm   8428 sec   (542 perm/sec)   p_kst 4.376368e-07   p_cons 9.999731e-01   p_joint 1.750547e-06

Joint ci ratio: 1.306665e+00	ci left: 7.541121e-07	ci right 3.441741e-06	k: 8	n:4580000
Cons ci ratio: 9.530969e-06	ci left: 9.999680e-01	ci right 9.999777e-01	k: 4579877	n:4580000
KS ci ratio: 2.263212e+00	ci left: 5.288413e-08	ci right 1.577442e-06	k: 2	n:4580000
ZNF479   4580000 perm   8463 sec   (541 perm/sec)   p_kst 4.366812e-07   p_cons 9.999731e-01   p_joint 1.746725e-06

Joint ci ratio: 1.306665e+00	ci left: 7.524692e-07	ci right 3.434243e-06	k: 8	n:4590000
Cons ci ratio: 9.510204e-06	ci left: 9.999680e-01	ci right 9.999777e-01	k: 4589877	n:4590000
KS ci ratio: 2.263212e+00	ci left: 5.276891e-08	ci right 1.574005e-06	k: 2	n:4590000
ZNF479   4590000 perm   8498 sec   (540 perm/sec)   p_kst 4.357298e-07   p_cons 9.999732e-01   p_joint 1.742919e-06

Joint ci ratio: 1.306665e+00	ci left: 7.508334e-07	ci right 3.426777e-06	k: 8	n:4600000
Cons ci ratio: 9.489530e-06	ci left: 9.999681e-01	ci right 9.999778e-01	k: 4599877	n:4600000
KS ci ratio: 2.263212e+00	ci left: 5.265420e-08	ci right 1.570583e-06	k: 2	n:4600000
ZNF479   4600000 perm   8534 sec   (539 perm/sec)   p_kst 4.347826e-07   p_cons 9.999733e-01   p_joint 1.739130e-06

Joint ci ratio: 1.306665e+00	ci left: 7.492047e-07	ci right 3.419344e-06	k: 8	n:4610000
Cons ci ratio: 9.507050e-06	ci left: 9.999679e-01	ci right 9.999776e-01	k: 4609876	n:4610000
KS ci ratio: 2.263212e+00	ci left: 5.253998e-08	ci right 1.567176e-06	k: 2	n:4610000
ZNF479   4610000 perm   8568 sec   (538 perm/sec)   p_kst 4.338395e-07   p_cons 9.999731e-01   p_joint 1.735358e-06

Joint ci ratio: 1.306665e+00	ci left: 7.475830e-07	ci right 3.411943e-06	k: 8	n:4620000
Cons ci ratio: 9.486472e-06	ci left: 9.999680e-01	ci right 9.999777e-01	k: 4619876	n:4620000
KS ci ratio: 2.263212e+00	ci left: 5.242626e-08	ci right 1.563784e-06	k: 2	n:4620000
ZNF479   4620000 perm   8603 sec   (537 perm/sec)   p_kst 4.329004e-07   p_cons 9.999732e-01   p_joint 1.731602e-06

Joint ci ratio: 1.239611e+00	ci left: 8.888499e-07	ci right 3.690019e-06	k: 9	n:4630000
Cons ci ratio: 9.503772e-06	ci left: 9.999678e-01	ci right 9.999775e-01	k: 4629875	n:4630000
KS ci ratio: 2.263212e+00	ci left: 5.231302e-08	ci right 1.560407e-06	k: 2	n:4630000
ZNF479   4630000 perm   8638 sec   (536 perm/sec)   p_kst 4.319654e-07   p_cons 9.999730e-01   p_joint 1.943844e-06

Joint ci ratio: 1.239611e+00	ci left: 8.869342e-07	ci right 3.682066e-06	k: 9	n:4640000
Cons ci ratio: 9.483290e-06	ci left: 9.999679e-01	ci right 9.999776e-01	k: 4639875	n:4640000
KS ci ratio: 2.263212e+00	ci left: 5.220028e-08	ci right 1.557044e-06	k: 2	n:4640000
ZNF479   4640000 perm   8673 sec   (535 perm/sec)   p_kst 4.310345e-07   p_cons 9.999731e-01   p_joint 1.939655e-06

Joint ci ratio: 1.239611e+00	ci left: 8.850268e-07	ci right 3.674148e-06	k: 9	n:4650000
Cons ci ratio: 9.537704e-06	ci left: 9.999675e-01	ci right 9.999772e-01	k: 4649873	n:4650000
KS ci ratio: 2.263212e+00	ci left: 5.208802e-08	ci right 1.553695e-06	k: 2	n:4650000
ZNF479   4650000 perm   8710 sec   (534 perm/sec)   p_kst 4.301075e-07   p_cons 9.999727e-01   p_joint 1.935484e-06

Joint ci ratio: 1.239611e+00	ci left: 8.831276e-07	ci right 3.666264e-06	k: 9	n:4660000
Cons ci ratio: 9.517237e-06	ci left: 9.999676e-01	ci right 9.999773e-01	k: 4659873	n:4660000
KS ci ratio: 2.263212e+00	ci left: 5.197624e-08	ci right 1.550361e-06	k: 2	n:4660000
ZNF479   4660000 perm   8745 sec   (533 perm/sec)   p_kst 4.291845e-07   p_cons 9.999727e-01   p_joint 1.931330e-06

Joint ci ratio: 1.239611e+00	ci left: 8.812366e-07	ci right 3.658413e-06	k: 9	n:4670000
Cons ci ratio: 9.533883e-06	ci left: 9.999674e-01	ci right 9.999771e-01	k: 4669872	n:4670000
KS ci ratio: 2.263212e+00	ci left: 5.186495e-08	ci right 1.547041e-06	k: 2	n:4670000
ZNF479   4670000 perm   8780 sec   (532 perm/sec)   p_kst 4.282655e-07   p_cons 9.999726e-01   p_joint 1.927195e-06

Joint ci ratio: 1.239611e+00	ci left: 8.793536e-07	ci right 3.650596e-06	k: 9	n:4680000
Cons ci ratio: 9.550315e-06	ci left: 9.999672e-01	ci right 9.999770e-01	k: 4679871	n:4680000
KS ci ratio: 2.263212e+00	ci left: 5.175412e-08	ci right 1.543736e-06	k: 2	n:4680000
ZNF479   4680000 perm   8817 sec   (531 perm/sec)   p_kst 4.273504e-07   p_cons 9.999724e-01   p_joint 1.923077e-06

Joint ci ratio: 1.239611e+00	ci left: 8.774786e-07	ci right 3.642812e-06	k: 9	n:4690000
Cons ci ratio: 9.529951e-06	ci left: 9.999673e-01	ci right 9.999770e-01	k: 4689871	n:4690000
KS ci ratio: 2.263212e+00	ci left: 5.164377e-08	ci right 1.540444e-06	k: 2	n:4690000
ZNF479   4690000 perm   8852 sec   (530 perm/sec)   p_kst 4.264392e-07   p_cons 9.999725e-01   p_joint 1.918977e-06

Joint ci ratio: 1.239611e+00	ci left: 8.756117e-07	ci right 3.635061e-06	k: 9	n:4700000
Cons ci ratio: 9.509675e-06	ci left: 9.999674e-01	ci right 9.999771e-01	k: 4699871	n:4700000
KS ci ratio: 2.263212e+00	ci left: 5.153389e-08	ci right 1.537167e-06	k: 2	n:4700000
ZNF479   4700000 perm   8888 sec   (529 perm/sec)   p_kst 4.255319e-07   p_cons 9.999726e-01   p_joint 1.914894e-06

Joint ci ratio: 1.239611e+00	ci left: 8.737526e-07	ci right 3.627344e-06	k: 9	n:4710000
Cons ci ratio: 9.525913e-06	ci left: 9.999672e-01	ci right 9.999769e-01	k: 4709870	n:4710000
KS ci ratio: 2.263212e+00	ci left: 5.142448e-08	ci right 1.533903e-06	k: 2	n:4710000
ZNF479   4710000 perm   8923 sec   (528 perm/sec)   p_kst 4.246285e-07   p_cons 9.999724e-01   p_joint 1.910828e-06

Joint ci ratio: 1.239611e+00	ci left: 8.719014e-07	ci right 3.619659e-06	k: 9	n:4720000
Cons ci ratio: 9.505731e-06	ci left: 9.999673e-01	ci right 9.999770e-01	k: 4719870	n:4720000
KS ci ratio: 2.263212e+00	ci left: 5.131553e-08	ci right 1.530653e-06	k: 2	n:4720000
ZNF479   4720000 perm   8959 sec   (527 perm/sec)   p_kst 4.237288e-07   p_cons 9.999725e-01   p_joint 1.906780e-06

Joint ci ratio: 1.239611e+00	ci left: 8.700581e-07	ci right 3.612006e-06	k: 9	n:4730000
Cons ci ratio: 9.521771e-06	ci left: 9.999671e-01	ci right 9.999768e-01	k: 4729869	n:4730000
KS ci ratio: 2.263212e+00	ci left: 5.120704e-08	ci right 1.527417e-06	k: 2	n:4730000
ZNF479   4730000 perm   8994 sec   (526 perm/sec)   p_kst 4.228330e-07   p_cons 9.999723e-01   p_joint 1.902748e-06

Joint ci ratio: 1.239611e+00	ci left: 8.682225e-07	ci right 3.604386e-06	k: 9	n:4740000
Cons ci ratio: 9.537607e-06	ci left: 9.999670e-01	ci right 9.999767e-01	k: 4739868	n:4740000
KS ci ratio: 2.263212e+00	ci left: 5.109901e-08	ci right 1.524195e-06	k: 2	n:4740000
ZNF479   4740000 perm   9029 sec   (525 perm/sec)   p_kst 4.219409e-07   p_cons 9.999722e-01   p_joint 1.898734e-06

Joint ci ratio: 1.239611e+00	ci left: 8.663947e-07	ci right 3.596798e-06	k: 9	n:4750000
Cons ci ratio: 9.553241e-06	ci left: 9.999668e-01	ci right 9.999766e-01	k: 4749867	n:4750000
KS ci ratio: 2.263212e+00	ci left: 5.099143e-08	ci right 1.520986e-06	k: 2	n:4750000
ZNF479   4750000 perm   9065 sec   (524 perm/sec)   p_kst 4.210526e-07   p_cons 9.999720e-01   p_joint 1.894737e-06

Joint ci ratio: 1.239611e+00	ci left: 8.645745e-07	ci right 3.589241e-06	k: 9	n:4760000
Cons ci ratio: 9.533171e-06	ci left: 9.999669e-01	ci right 9.999766e-01	k: 4759867	n:4760000
KS ci ratio: 2.263212e+00	ci left: 5.088431e-08	ci right 1.517791e-06	k: 2	n:4760000
ZNF479   4760000 perm   9100 sec   (523 perm/sec)   p_kst 4.201681e-07   p_cons 9.999721e-01   p_joint 1.890756e-06

Joint ci ratio: 1.239611e+00	ci left: 8.627620e-07	ci right 3.581717e-06	k: 9	n:4770000
Cons ci ratio: 9.513185e-06	ci left: 9.999670e-01	ci right 9.999767e-01	k: 4769867	n:4770000
KS ci ratio: 2.263212e+00	ci left: 5.077763e-08	ci right 1.514609e-06	k: 2	n:4770000
ZNF479   4770000 perm   9136 sec   (522 perm/sec)   p_kst 4.192872e-07   p_cons 9.999721e-01   p_joint 1.886792e-06

Joint ci ratio: 1.239611e+00	ci left: 8.609571e-07	ci right 3.574224e-06	k: 9	n:4780000
Cons ci ratio: 9.493283e-06	ci left: 9.999670e-01	ci right 9.999767e-01	k: 4779867	n:4780000
KS ci ratio: 2.263212e+00	ci left: 5.067140e-08	ci right 1.511440e-06	k: 2	n:4780000
ZNF479   4780000 perm   9173 sec   (521 perm/sec)   p_kst 4.184100e-07   p_cons 9.999722e-01   p_joint 1.882845e-06

Joint ci ratio: 1.239611e+00	ci left: 8.591597e-07	ci right 3.566762e-06	k: 9	n:4790000
Cons ci ratio: 9.473464e-06	ci left: 9.999671e-01	ci right 9.999768e-01	k: 4789867	n:4790000
KS ci ratio: 2.263212e+00	ci left: 5.056562e-08	ci right 1.508285e-06	k: 2	n:4790000
ZNF479   4790000 perm   9209 sec   (520 perm/sec)   p_kst 4.175365e-07   p_cons 9.999722e-01   p_joint 1.878914e-06

Joint ci ratio: 1.239611e+00	ci left: 8.573697e-07	ci right 3.559331e-06	k: 9	n:4800000
Cons ci ratio: 9.453727e-06	ci left: 9.999672e-01	ci right 9.999768e-01	k: 4799867	n:4800000
KS ci ratio: 2.263212e+00	ci left: 5.046027e-08	ci right 1.505142e-06	k: 2	n:4800000
ZNF479   4800000 perm   9245 sec   (519 perm/sec)   p_kst 4.166667e-07   p_cons 9.999723e-01   p_joint 1.875000e-06

Joint ci ratio: 1.239611e+00	ci left: 8.555873e-07	ci right 3.551931e-06	k: 9	n:4810000
Cons ci ratio: 9.434073e-06	ci left: 9.999672e-01	ci right 9.999768e-01	k: 4809867	n:4810000
KS ci ratio: 2.263212e+00	ci left: 5.035536e-08	ci right 1.502013e-06	k: 2	n:4810000
ZNF479   4810000 perm   9282 sec   (518 perm/sec)   p_kst 4.158004e-07   p_cons 9.999723e-01   p_joint 1.871102e-06

Joint ci ratio: 1.239611e+00	ci left: 8.538122e-07	ci right 3.544562e-06	k: 9	n:4820000
Cons ci ratio: 9.414500e-06	ci left: 9.999673e-01	ci right 9.999769e-01	k: 4819867	n:4820000
KS ci ratio: 2.263212e+00	ci left: 5.025089e-08	ci right 1.498897e-06	k: 2	n:4820000
ZNF479   4820000 perm   9318 sec   (517 perm/sec)   p_kst 4.149378e-07   p_cons 9.999724e-01   p_joint 1.867220e-06

Joint ci ratio: 1.239611e+00	ci left: 8.520445e-07	ci right 3.537223e-06	k: 9	n:4830000
Cons ci ratio: 9.395008e-06	ci left: 9.999674e-01	ci right 9.999769e-01	k: 4829867	n:4830000
KS ci ratio: 2.263212e+00	ci left: 5.014685e-08	ci right 1.495794e-06	k: 2	n:4830000
ZNF479   4830000 perm   9354 sec   (516 perm/sec)   p_kst 4.140787e-07   p_cons 9.999725e-01   p_joint 1.863354e-06

Joint ci ratio: 1.239611e+00	ci left: 8.502840e-07	ci right 3.529915e-06	k: 9	n:4840000
Cons ci ratio: 9.410516e-06	ci left: 9.999672e-01	ci right 9.999768e-01	k: 4839866	n:4840000
KS ci ratio: 2.263212e+00	ci left: 5.004324e-08	ci right 1.492703e-06	k: 2	n:4840000
ZNF479   4840000 perm   9390 sec   (515 perm/sec)   p_kst 4.132231e-07   p_cons 9.999723e-01   p_joint 1.859504e-06

Joint ci ratio: 1.239611e+00	ci left: 8.485309e-07	ci right 3.522637e-06	k: 9	n:4850000
Cons ci ratio: 9.391112e-06	ci left: 9.999673e-01	ci right 9.999769e-01	k: 4849866	n:4850000
KS ci ratio: 2.263212e+00	ci left: 4.994006e-08	ci right 1.489626e-06	k: 2	n:4850000
ZNF479   4850000 perm   9426 sec   (515 perm/sec)   p_kst 4.123711e-07   p_cons 9.999724e-01   p_joint 1.855670e-06

Joint ci ratio: 1.239611e+00	ci left: 8.467849e-07	ci right 3.515389e-06	k: 9	n:4860000
Cons ci ratio: 9.440956e-06	ci left: 9.999669e-01	ci right 9.999765e-01	k: 4859864	n:4860000
KS ci ratio: 2.263212e+00	ci left: 4.983730e-08	ci right 1.486560e-06	k: 2	n:4860000
ZNF479   4860000 perm   9462 sec   (514 perm/sec)   p_kst 4.115226e-07   p_cons 9.999720e-01   p_joint 1.851852e-06

Joint ci ratio: 1.239611e+00	ci left: 8.450461e-07	ci right 3.508170e-06	k: 9	n:4870000
Cons ci ratio: 9.421570e-06	ci left: 9.999670e-01	ci right 9.999766e-01	k: 4869864	n:4870000
KS ci ratio: 2.263212e+00	ci left: 4.973497e-08	ci right 1.483508e-06	k: 2	n:4870000
ZNF479   4870000 perm   9498 sec   (513 perm/sec)   p_kst 4.106776e-07   p_cons 9.999721e-01   p_joint 1.848049e-06

Joint ci ratio: 1.239611e+00	ci left: 8.433145e-07	ci right 3.500981e-06	k: 9	n:4880000
Cons ci ratio: 9.436517e-06	ci left: 9.999668e-01	ci right 9.999764e-01	k: 4879863	n:4880000
KS ci ratio: 2.263212e+00	ci left: 4.963305e-08	ci right 1.480468e-06	k: 2	n:4880000
ZNF479   4880000 perm   9536 sec   (512 perm/sec)   p_kst 4.098361e-07   p_cons 9.999719e-01   p_joint 1.844262e-06

Joint ci ratio: 1.239611e+00	ci left: 8.415899e-07	ci right 3.493822e-06	k: 9	n:4890000
Cons ci ratio: 9.451278e-06	ci left: 9.999667e-01	ci right 9.999763e-01	k: 4889862	n:4890000
KS ci ratio: 2.263212e+00	ci left: 4.953155e-08	ci right 1.477440e-06	k: 2	n:4890000
ZNF479   4890000 perm   9573 sec   (511 perm/sec)   p_kst 4.089980e-07   p_cons 9.999718e-01   p_joint 1.840491e-06

Joint ci ratio: 1.239611e+00	ci left: 8.398724e-07	ci right 3.486692e-06	k: 9	n:4900000
Cons ci ratio: 9.465858e-06	ci left: 9.999665e-01	ci right 9.999762e-01	k: 4899861	n:4900000
KS ci ratio: 2.263212e+00	ci left: 4.943047e-08	ci right 1.474425e-06	k: 2	n:4900000
ZNF479   4900000 perm   9609 sec   (510 perm/sec)   p_kst 4.081633e-07   p_cons 9.999716e-01   p_joint 1.836735e-06

Joint ci ratio: 1.239611e+00	ci left: 8.381619e-07	ci right 3.479591e-06	k: 9	n:4910000
Cons ci ratio: 9.480258e-06	ci left: 9.999664e-01	ci right 9.999760e-01	k: 4909860	n:4910000
KS ci ratio: 2.263212e+00	ci left: 4.932980e-08	ci right 1.471422e-06	k: 2	n:4910000
ZNF479   4910000 perm   9646 sec   (509 perm/sec)   p_kst 4.073320e-07   p_cons 9.999715e-01   p_joint 1.832994e-06

Joint ci ratio: 1.239611e+00	ci left: 8.364583e-07	ci right 3.472518e-06	k: 9	n:4920000
Cons ci ratio: 9.494480e-06	ci left: 9.999662e-01	ci right 9.999759e-01	k: 4919859	n:4920000
KS ci ratio: 2.263212e+00	ci left: 4.922953e-08	ci right 1.468432e-06	k: 2	n:4920000
ZNF479   4920000 perm   9683 sec   (508 perm/sec)   p_kst 4.065041e-07   p_cons 9.999713e-01   p_joint 1.829268e-06

Joint ci ratio: 1.239611e+00	ci left: 8.347616e-07	ci right 3.465475e-06	k: 9	n:4930000
Cons ci ratio: 9.475221e-06	ci left: 9.999663e-01	ci right 9.999759e-01	k: 4929859	n:4930000
KS ci ratio: 2.263212e+00	ci left: 4.912967e-08	ci right 1.465453e-06	k: 2	n:4930000
ZNF479   4930000 perm   9720 sec   (507 perm/sec)   p_kst 4.056795e-07   p_cons 9.999714e-01   p_joint 1.825558e-06

Joint ci ratio: 1.239611e+00	ci left: 8.330718e-07	ci right 3.458459e-06	k: 9	n:4940000
Cons ci ratio: 9.456040e-06	ci left: 9.999663e-01	ci right 9.999760e-01	k: 4939859	n:4940000
KS ci ratio: 2.263212e+00	ci left: 4.903022e-08	ci right 1.462487e-06	k: 2	n:4940000
ZNF479   4940000 perm   9757 sec   (506 perm/sec)   p_kst 4.048583e-07   p_cons 9.999715e-01   p_joint 1.821862e-06

Joint ci ratio: 1.239611e+00	ci left: 8.313888e-07	ci right 3.451473e-06	k: 9	n:4950000
Cons ci ratio: 9.436937e-06	ci left: 9.999664e-01	ci right 9.999760e-01	k: 4949859	n:4950000
KS ci ratio: 2.263212e+00	ci left: 4.893117e-08	ci right 1.459532e-06	k: 2	n:4950000
ZNF479   4950000 perm   9794 sec   (505 perm/sec)   p_kst 4.040404e-07   p_cons 9.999715e-01   p_joint 1.818182e-06

Joint ci ratio: 1.239611e+00	ci left: 8.297126e-07	ci right 3.444514e-06	k: 9	n:4960000
Cons ci ratio: 9.417911e-06	ci left: 9.999665e-01	ci right 9.999761e-01	k: 4959859	n:4960000
KS ci ratio: 2.263212e+00	ci left: 4.883252e-08	ci right 1.456589e-06	k: 2	n:4960000
ZNF479   4960000 perm   9832 sec   (504 perm/sec)   p_kst 4.032258e-07   p_cons 9.999716e-01   p_joint 1.814516e-06

Joint ci ratio: 1.239611e+00	ci left: 8.280432e-07	ci right 3.437583e-06	k: 9	n:4970000
Cons ci ratio: 9.398961e-06	ci left: 9.999665e-01	ci right 9.999761e-01	k: 4969859	n:4970000
KS ci ratio: 2.263212e+00	ci left: 4.873426e-08	ci right 1.453659e-06	k: 2	n:4970000
ZNF479   4970000 perm   9869 sec   (504 perm/sec)   p_kst 4.024145e-07   p_cons 9.999716e-01   p_joint 1.810865e-06

Joint ci ratio: 1.239611e+00	ci left: 8.263805e-07	ci right 3.430681e-06	k: 9	n:4980000
Cons ci ratio: 9.380087e-06	ci left: 9.999666e-01	ci right 9.999762e-01	k: 4979859	n:4980000
KS ci ratio: 2.263212e+00	ci left: 4.863640e-08	ci right 1.450740e-06	k: 2	n:4980000
ZNF479   4980000 perm   9906 sec   (503 perm/sec)   p_kst 4.016064e-07   p_cons 9.999717e-01   p_joint 1.807229e-06

Joint ci ratio: 1.239611e+00	ci left: 8.247244e-07	ci right 3.423806e-06	k: 9	n:4990000
Cons ci ratio: 9.361289e-06	ci left: 9.999667e-01	ci right 9.999762e-01	k: 4989859	n:4990000
KS ci ratio: 2.263212e+00	ci left: 4.853894e-08	ci right 1.447832e-06	k: 2	n:4990000
ZNF479   4990000 perm   9944 sec   (502 perm/sec)   p_kst 4.008016e-07   p_cons 9.999717e-01   p_joint 1.803607e-06

Joint ci ratio: 1.239611e+00	ci left: 8.230749e-07	ci right 3.416958e-06	k: 9	n:5000000
Cons ci ratio: 9.342566e-06	ci left: 9.999667e-01	ci right 9.999763e-01	k: 4999859	n:5000000
KS ci ratio: 2.263212e+00	ci left: 4.844186e-08	ci right 1.444937e-06	k: 2	n:5000000
ZNF479   5000000 perm   9982 sec   (501 perm/sec)   p_kst 4.000000e-07   p_cons 9.999718e-01   p_joint 1.800000e-06

Outputting figure to mutsig2_images.part000000000197/ZNF479.3_1591_5000000_4e-07_0.99997_1.8e-06.png
                gene_name: ZNF479
               theta_stop: 2.3 
                    nperm: 5000000 
                     p_ks: 4.00e-07 
        ci_ks_bounds_left: 4.84e-08 
       ci_ks_bounds_right: 1.44e-06 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1.80e-06 
     ci_joint_bounds_left: 8.23e-07 
    ci_joint_bounds_right: 3.42e-06 

Current progress: 67 percent done.
ZNF43
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.403880e-02	ci left: 7.178502e-01	ci right 7.354176e-01	k: 7267	n:10000
Cons ci ratio: 4.639896e-02	ci left: 4.067137e-01	ci right 4.261351e-01	k: 4164	n:10000
KS ci ratio: 6.736596e-03	ci left: 9.679427e-01	ci right 9.745790e-01	k: 9714	n:10000
ZNF43   10000 perm   1 sec   (6739 perm/sec)   p_kst 9.714000e-01   p_cons 4.164000e-01   p_joint 7.267000e-01

Outputting figure to mutsig2_images.part000000000197/ZNF43.2_2446_10000_0.9714_0.4164_0.7267.png
                gene_name: ZNF43
               theta_stop: 0.046 
                    nperm: 10000 
                     p_ks: 0.97 
        ci_ks_bounds_left: 0.97 
       ci_ks_bounds_right: 0.97 
                   p_cons: 0.42 
      ci_cons_bounds_left: 0.41 
     ci_cons_bounds_right: 0.43 
                  p_joint: 0.73 
     ci_joint_bounds_left: 0.72 
    ci_joint_bounds_right: 0.74 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000197
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 197 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1536>
Subject: Job 8704429: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1536>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000198> was used as the working directory.
Started at Thu Nov 15 19:38:17 2012
Results reported at Thu Nov 15 19:47:25 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000198.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000198.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 198  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000198.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :    656.16 sec.
    Max Memory :      6080 MB
    Max Swap   :      8540 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
198
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 198
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 198: processing genes 17823 - 17912
Calculating significance of each gene.
Using projection method.
17823	ZNF550	1
17824	ZNF551	1
17825	ZNF552	1
17826	ZNF554	1
17827	ZNF555	1
17828	ZNF556	1
17829	ZNF557	1
17830	ZNF558	1
17831	ZNF559	1
17832	ZNF560	1
17833	ZNF561	1
17834	ZNF562	1
17835	ZNF563	1.617377e-03
17836	ZNF564	1.330695e-01
17837	ZNF565	2.121034e-01
17838	ZNF566	1
17839	ZNF567	1
17840	ZNF568	1
17841	ZNF569	1
17842	ZNF57	1.292217e-02
17843	ZNF570	1
17844	ZNF571	1
17845	ZNF572	1
17846	ZNF573	1
17847	ZNF574	1
17848	ZNF575	1
17849	ZNF576	1
17850	ZNF577	1
In gene ZNF578 the following bins exceed PROBCAP:
    THCA-FY-A3I4-TP	categ 5	N = 1785    n = 1	mu =   1.36e-07
17851	ZNF578	7.634518e-03
17852	ZNF580	1
17853	ZNF581	1
17854	ZNF582	1
17855	ZNF583	1
17856	ZNF584	1
17857	ZNF585A	1
17858	ZNF585B	2.917829e-01
17859	ZNF586	1
17860	ZNF587	1
17861	ZNF589	1
17862	ZNF592	3.556990e-01
17863	ZNF593	1
17864	ZNF594	1
17865	ZNF595	1
17866	ZNF596	1
17867	ZNF597	1
In gene ZNF598 the following bins exceed PROBCAP:
    THCA-DJ-A2PQ-TP	categ 6	N = 1867    n = 1	mu =   6.84e-08
17868	ZNF598	1.474463e-02
17869	ZNF599	1
17870	ZNF600	1
17871	ZNF605	1
17872	ZNF606	1
17873	ZNF607	1.661747e-01
17874	ZNF608	3.747755e-02
17875	ZNF609	4.257776e-01
17876	ZNF610	1
17877	ZNF611	1.714585e-01
17878	ZNF613	2.272855e-01
17879	ZNF614	1
17880	ZNF615	1
17881	ZNF616	1.060769e-01
17882	ZNF618	1
17883	ZNF619	1
17884	ZNF620	1
17885	ZNF621	1.006104e-01
17886	ZNF622	1
17887	ZNF623	1.322163e-01
17888	ZNF624	3.383534e-02
17889	ZNF625	1
17890	ZNF626	5.524478e-03
17891	ZNF627	1
17892	ZNF628	1
In gene ZNF629 the following bins exceed PROBCAP:
    THCA-EM-A22M-TP	categ 6	N = 1984    n = 1	mu =   1.03e-07
17893	ZNF629	1.169331e-01
17894	ZNF630	1
17895	ZNF638	1
17896	ZNF639	1
17897	ZNF641	1
17898	ZNF642	1
17899	ZNF643	1
17900	ZNF644	3.705313e-01
17901	ZNF645	1
17902	ZNF646	5.648044e-01
17903	ZNF648	1
17904	ZNF649	1.909644e-01
17905	ZNF652	1
17906	ZNF653	1
17907	ZNF654	1
17908	ZNF655	1
17909	ZNF658	1
17910	ZNF660	1
17911	ZNF662	1
17912	ZNF664	1
Done

Running MutSig 2:
Scatter job 198: processing genes 17823 - 17912
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZNF563
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.875766e-02	ci left: 4.957504e-01	ci right 5.154464e-01	k: 5056	n:10000
Cons ci ratio: 5.809187e-03	ci left: 9.755703e-01	ci right 9.813463e-01	k: 9786	n:10000
KS ci ratio: 5.110775e-02	ci left: 3.608245e-01	ci right 3.798511e-01	k: 3703	n:10000
ZNF563   10000 perm   2 sec   (6314 perm/sec)   p_kst 3.703000e-01   p_cons 9.786000e-01   p_joint 5.056000e-01

Outputting figure to mutsig2_images.part000000000198/ZNF563.3_1447_10000_0.3703_0.9786_0.5056.png
                gene_name: ZNF563
               theta_stop: 0.051 
                    nperm: 10000 
                     p_ks: 0.37 
        ci_ks_bounds_left: 0.36 
       ci_ks_bounds_right: 0.38 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.51 
     ci_joint_bounds_left: 0.50 
    ci_joint_bounds_right: 0.52 

Current progress: 14 percent done.
ZNF608
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.624069e-02	ci left: 5.292700e-01	ci right 5.489072e-01	k: 5391	n:10000
Cons ci ratio: 6.066330e-03	ci left: 9.735507e-01	ci right 9.795672e-01	k: 9767	n:10000
KS ci ratio: 4.900521e-02	ci left: 3.805230e-01	ci right 3.997410e-01	k: 3901	n:10000
ZNF608   10000 perm   2 sec   (4626 perm/sec)   p_kst 3.901000e-01   p_cons 9.767000e-01   p_joint 5.391000e-01

Outputting figure to mutsig2_images.part000000000198/ZNF608.3_4575_10000_0.3901_0.9767_0.5391.png
                gene_name: ZNF608
               theta_stop: 0.049 
                    nperm: 10000 
                     p_ks: 0.39 
        ci_ks_bounds_left: 0.38 
       ci_ks_bounds_right: 0.40 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.97 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.54 
     ci_joint_bounds_left: 0.53 
    ci_joint_bounds_right: 0.55 

Current progress: 29 percent done.
ZNF57
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.772737e-01	ci left: 5.108009e-03	ci right 8.389267e-03	k: 66	n:10000
Cons ci ratio: 4.158686e-02	ci left: 4.605772e-01	ci right 4.802401e-01	k: 4704	n:10000
KS ci ratio: 8.544729e-01	ci left: 1.222067e-03	ci right 3.087156e-03	k: 20	n:10000
ZNF57   10000 perm   2 sec   (6449 perm/sec)   p_kst 2.000000e-03   p_cons 4.704000e-01   p_joint 6.600000e-03

Joint ci ratio: 2.149918e-01	ci left: 1.459066e-02	ci right 1.815195e-02	k: 326	n:20000
Cons ci ratio: 2.826230e-02	ci left: 4.832986e-01	ci right 4.972042e-01	k: 9805	n:20000
KS ci ratio: 6.270744e-01	ci left: 1.344893e-03	ci right 2.606975e-03	k: 38	n:20000
ZNF57   20000 perm   4 sec   (5512 perm/sec)   p_kst 1.900000e-03   p_cons 4.902500e-01   p_joint 1.630000e-02

Joint ci ratio: 2.165951e-01	ci left: 9.629741e-03	ci right 1.199976e-02	k: 323	n:30000
Cons ci ratio: 2.323962e-02	ci left: 4.810622e-01	ci right 4.924070e-01	k: 14602	n:30000
KS ci ratio: 4.856811e-01	ci left: 1.643302e-03	ci right 2.723414e-03	k: 64	n:30000
ZNF57   30000 perm   6 sec   (5273 perm/sec)   p_kst 2.133333e-03   p_cons 4.867333e-01   p_joint 1.076667e-02

Joint ci ratio: 2.235984e-01	ci left: 6.772323e-03	ci right 8.500309e-03	k: 304	n:40000
Cons ci ratio: 2.018721e-02	ci left: 4.803160e-01	ci right 4.901362e-01	k: 19409	n:40000
KS ci ratio: 4.462897e-01	ci left: 1.497267e-03	ci right 2.377565e-03	k: 76	n:40000
ZNF57   40000 perm   8 sec   (5109 perm/sec)   p_kst 1.900000e-03   p_cons 4.852250e-01   p_joint 7.600000e-03

Joint ci ratio: 1.730344e-01	ci left: 9.280380e-03	ci right 1.105718e-02	k: 507	n:50000
Cons ci ratio: 1.806788e-02	ci left: 4.805104e-01	ci right 4.892914e-01	k: 24245	n:50000
KS ci ratio: 3.976255e-01	ci left: 1.555474e-03	ci right 2.344151e-03	k: 96	n:50000
ZNF57   50000 perm   10 sec   (4962 perm/sec)   p_kst 1.920000e-03   p_cons 4.849000e-01   p_joint 1.014000e-02

Joint ci ratio: 1.787681e-01	ci left: 7.239025e-03	ci right 8.675848e-03	k: 476	n:60000
Cons ci ratio: 1.650364e-02	ci left: 4.805936e-01	ci right 4.886079e-01	k: 29076	n:60000
KS ci ratio: 3.589863e-01	ci left: 1.628124e-03	ci right 2.354734e-03	k: 118	n:60000
ZNF57   60000 perm   12 sec   (4841 perm/sec)   p_kst 1.966667e-03   p_cons 4.846000e-01   p_joint 7.933333e-03

Joint ci ratio: 1.655823e-01	ci left: 7.284886e-03	ci right 8.613531e-03	k: 555	n:70000
Cons ci ratio: 1.531840e-02	ci left: 4.796203e-01	ci right 4.870383e-01	k: 33833	n:70000
KS ci ratio: 3.286229e-01	ci left: 1.695799e-03	ci right 2.375113e-03	k: 141	n:70000
ZNF57   70000 perm   15 sec   (4728 perm/sec)   p_kst 2.014286e-03   p_cons 4.833286e-01   p_joint 7.928571e-03

Joint ci ratio: 1.551874e-01	ci left: 7.298177e-03	ci right 8.537908e-03	k: 632	n:80000
Cons ci ratio: 1.433601e-02	ci left: 4.796191e-01	ci right 4.865571e-01	k: 38647	n:80000
KS ci ratio: 3.057848e-01	ci left: 1.736964e-03	ci right 2.375012e-03	k: 163	n:80000
ZNF57   80000 perm   17 sec   (4629 perm/sec)   p_kst 2.037500e-03   p_cons 4.830875e-01   p_joint 7.900000e-03

Joint ci ratio: 1.465327e-01	ci left: 7.310549e-03	ci right 8.477060e-03	k: 709	n:90000
Cons ci ratio: 1.353326e-02	ci left: 4.791860e-01	ci right 4.857262e-01	k: 43421	n:90000
KS ci ratio: 2.935241e-01	ci left: 1.687827e-03	ci right 2.278345e-03	k: 177	n:90000
ZNF57   90000 perm   20 sec   (4530 perm/sec)   p_kst 1.966667e-03   p_cons 4.824556e-01   p_joint 7.877778e-03

Joint ci ratio: 1.447544e-01	ci left: 6.752792e-03	ci right 7.816087e-03	k: 727	n:100000
Cons ci ratio: 1.285258e-02	ci left: 4.788186e-01	ci right 4.850224e-01	k: 48192	n:100000
KS ci ratio: 2.748493e-01	ci left: 1.751253e-03	ci right 2.318253e-03	k: 202	n:100000
ZNF57   100000 perm   23 sec   (4435 perm/sec)   p_kst 2.020000e-03   p_cons 4.819200e-01   p_joint 7.270000e-03

Joint ci ratio: 1.449029e-01	ci left: 6.129996e-03	ci right 7.096294e-03	k: 726	n:110000
Cons ci ratio: 1.225228e-02	ci left: 4.790522e-01	ci right 4.849669e-01	k: 53021	n:110000
KS ci ratio: 2.610647e-01	ci left: 1.778624e-03	ci right 2.320895e-03	k: 224	n:110000
ZNF57   110000 perm   25 sec   (4338 perm/sec)   p_kst 2.036364e-03   p_cons 4.820091e-01   p_joint 6.600000e-03

Joint ci ratio: 1.392734e-01	ci left: 6.101385e-03	ci right 7.022705e-03	k: 786	n:120000
Cons ci ratio: 1.174049e-02	ci left: 4.787609e-01	ci right 4.844233e-01	k: 57791	n:120000
KS ci ratio: 2.476632e-01	ci left: 1.825471e-03	ci right 2.349059e-03	k: 249	n:120000
ZNF57   120000 perm   28 sec   (4261 perm/sec)   p_kst 2.075000e-03   p_cons 4.815917e-01   p_joint 6.550000e-03

Joint ci ratio: 1.322252e-01	ci left: 6.271165e-03	ci right 7.166436e-03	k: 872	n:130000
Cons ci ratio: 1.126861e-02	ci left: 4.793726e-01	ci right 4.848128e-01	k: 62672	n:130000
KS ci ratio: 2.348536e-01	ci left: 1.887430e-03	ci right 2.396725e-03	k: 277	n:130000
ZNF57   130000 perm   31 sec   (4181 perm/sec)   p_kst 2.130769e-03   p_cons 4.820923e-01   p_joint 6.707692e-03

Joint ci ratio: 1.265479e-01	ci left: 6.376184e-03	ci right 7.244431e-03	k: 952	n:140000
Cons ci ratio: 1.086460e-02	ci left: 4.792009e-01	ci right 4.844427e-01	k: 67455	n:140000
KS ci ratio: 2.213229e-01	ci left: 1.988352e-03	ci right 2.489764e-03	k: 312	n:140000
ZNF57   140000 perm   34 sec   (4105 perm/sec)   p_kst 2.228571e-03   p_cons 4.818214e-01   p_joint 6.800000e-03

Joint ci ratio: 1.222612e-01	ci left: 6.390336e-03	ci right 7.228899e-03	k: 1020	n:150000
Cons ci ratio: 1.049932e-02	ci left: 4.791418e-01	ci right 4.842056e-01	k: 72251	n:150000
KS ci ratio: 2.155507e-01	ci left: 1.962926e-03	ci right 2.443307e-03	k: 329	n:150000
ZNF57   150000 perm   37 sec   (4031 perm/sec)   p_kst 2.193333e-03   p_cons 4.816733e-01   p_joint 6.800000e-03

Joint ci ratio: 1.182187e-01	ci left: 6.421350e-03	ci right 7.234175e-03	k: 1091	n:160000
Cons ci ratio: 1.017023e-02	ci left: 4.790115e-01	ci right 4.839142e-01	k: 77034	n:160000
KS ci ratio: 2.081144e-01	ci left: 1.982289e-03	ci right 2.448542e-03	k: 353	n:160000
ZNF57   160000 perm   40 sec   (3960 perm/sec)   p_kst 2.206250e-03   p_cons 4.814625e-01   p_joint 6.818750e-03

Joint ci ratio: 1.148511e-01	ci left: 6.414831e-03	ci right 7.202130e-03	k: 1156	n:170000
Cons ci ratio: 9.875603e-03	ci left: 4.786282e-01	ci right 4.833842e-01	k: 81771	n:170000
KS ci ratio: 2.006019e-01	ci left: 2.016386e-03	ci right 2.471444e-03	k: 380	n:170000
ZNF57   170000 perm   44 sec   (3894 perm/sec)   p_kst 2.235294e-03   p_cons 4.810059e-01   p_joint 6.800000e-03

Joint ci ratio: 1.116638e-01	ci left: 6.420130e-03	ci right 7.184773e-03	k: 1223	n:180000
Cons ci ratio: 9.598653e-03	ci left: 4.786283e-01	ci right 4.832501e-01	k: 86569	n:180000
KS ci ratio: 1.943263e-01	ci left: 2.036390e-03	ci right 2.479885e-03	k: 405	n:180000
ZNF57   180000 perm   47 sec   (3830 perm/sec)   p_kst 2.250000e-03   p_cons 4.809389e-01   p_joint 6.794444e-03

Joint ci ratio: 1.097599e-01	ci left: 6.302256e-03	ci right 7.039233e-03	k: 1266	n:190000
Cons ci ratio: 9.348498e-03	ci left: 4.783774e-01	ci right 4.828758e-01	k: 91319	n:190000
KS ci ratio: 1.868746e-01	ci left: 2.094617e-03	ci right 2.531317e-03	k: 438	n:190000
ZNF57   190000 perm   50 sec   (3766 perm/sec)   p_kst 2.305263e-03   p_cons 4.806263e-01   p_joint 6.663158e-03

Joint ci ratio: 1.164383e-01	ci left: 5.306767e-03	ci right 5.967686e-03	k: 1126	n:200000
Cons ci ratio: 9.492773e-03	ci left: 4.580337e-01	ci right 4.624074e-01	k: 92044	n:200000
KS ci ratio: 1.809895e-01	ci left: 2.128214e-03	ci right 2.556414e-03	k: 467	n:200000
ZNF57   200000 perm   54 sec   (3704 perm/sec)   p_kst 2.335000e-03   p_cons 4.602200e-01   p_joint 5.630000e-03

Joint ci ratio: 1.143806e-01	ci left: 5.243656e-03	ci right 5.884394e-03	k: 1167	n:210000
Cons ci ratio: 9.259936e-03	ci left: 4.583045e-01	ci right 4.625728e-01	k: 96692	n:210000
KS ci ratio: 1.758048e-01	ci left: 2.154253e-03	ci right 2.573957e-03	k: 495	n:210000
ZNF57   210000 perm   58 sec   (3648 perm/sec)   p_kst 2.357143e-03   p_cons 4.604381e-01   p_joint 5.557143e-03

Joint ci ratio: 1.119174e-01	ci left: 5.234981e-03	ci right 5.859974e-03	k: 1219	n:220000
Cons ci ratio: 9.043099e-03	ci left: 4.585700e-01	ci right 4.627402e-01	k: 101344	n:220000
KS ci ratio: 1.727013e-01	ci left: 2.134581e-03	ci right 2.542345e-03	k: 513	n:220000
ZNF57   220000 perm   61 sec   (3592 perm/sec)   p_kst 2.331818e-03   p_cons 4.606545e-01   p_joint 5.540909e-03

Joint ci ratio: 1.094339e-01	ci left: 5.244112e-03	ci right 5.855406e-03	k: 1275	n:230000
Cons ci ratio: 8.837563e-03	ci left: 4.589959e-01	ci right 4.630746e-01	k: 106038	n:230000
KS ci ratio: 1.688051e-01	ci left: 2.141662e-03	ci right 2.540610e-03	k: 537	n:230000
ZNF57   230000 perm   65 sec   (3539 perm/sec)   p_kst 2.334783e-03   p_cons 4.610348e-01   p_joint 5.543478e-03

Joint ci ratio: 1.056431e-01	ci left: 5.402710e-03	ci right 6.009321e-03	k: 1368	n:240000
Cons ci ratio: 8.649413e-03	ci left: 4.591582e-01	ci right 4.631510e-01	k: 110677	n:240000
KS ci ratio: 1.663522e-01	ci left: 2.116294e-03	ci right 2.504215e-03	k: 553	n:240000
ZNF57   240000 perm   69 sec   (3485 perm/sec)   p_kst 2.304167e-03   p_cons 4.611542e-01   p_joint 5.700000e-03

Joint ci ratio: 1.038772e-01	ci left: 5.369671e-03	ci right 5.961878e-03	k: 1415	n:250000
Cons ci ratio: 8.480089e-03	ci left: 4.588805e-01	ci right 4.627924e-01	k: 115209	n:250000
KS ci ratio: 1.638591e-01	ci left: 2.096831e-03	ci right 2.474856e-03	k: 570	n:250000
ZNF57   250000 perm   73 sec   (3433 perm/sec)   p_kst 2.280000e-03   p_cons 4.608360e-01   p_joint 5.660000e-03

Joint ci ratio: 1.018822e-01	ci left: 5.372988e-03	ci right 5.953500e-03	k: 1471	n:260000
Cons ci ratio: 8.315180e-03	ci left: 4.589325e-01	ci right 4.627684e-01	k: 119821	n:260000
KS ci ratio: 1.605200e-01	ci left: 2.104746e-03	ci right 2.475719e-03	k: 594	n:260000
ZNF57   260000 perm   77 sec   (3380 perm/sec)   p_kst 2.284615e-03   p_cons 4.608500e-01   p_joint 5.657692e-03

Joint ci ratio: 1.001629e-01	ci left: 5.358103e-03	ci right 5.926662e-03	k: 1522	n:270000
Cons ci ratio: 8.162451e-03	ci left: 4.588036e-01	ci right 4.625676e-01	k: 124385	n:270000
KS ci ratio: 1.582766e-01	ci left: 2.087242e-03	ci right 2.449500e-03	k: 611	n:270000
ZNF57   270000 perm   81 sec   (3328 perm/sec)   p_kst 2.262963e-03   p_cons 4.606852e-01   p_joint 5.637037e-03

Joint ci ratio: 1.010779e-01	ci left: 5.072702e-03	ci right 5.616185e-03	k: 1495	n:280000
Cons ci ratio: 8.014785e-03	ci left: 4.588738e-01	ci right 4.625699e-01	k: 129002	n:280000
KS ci ratio: 1.547741e-01	ci left: 2.108783e-03	ci right 2.465930e-03	k: 639	n:280000
ZNF57   280000 perm   85 sec   (3281 perm/sec)   p_kst 2.282143e-03   p_cons 4.607214e-01   p_joint 5.339286e-03

Joint ci ratio: 1.089835e-01	ci left: 4.199249e-03	ci right 4.686598e-03	k: 1287	n:290000
Cons ci ratio: 7.568029e-03	ci left: 4.787352e-01	ci right 4.823755e-01	k: 139361	n:290000
KS ci ratio: 1.520658e-01	ci left: 2.112332e-03	ci right 2.463250e-03	k: 662	n:290000
ZNF57   290000 perm   90 sec   (3228 perm/sec)   p_kst 2.282759e-03   p_cons 4.805552e-01   p_joint 4.437931e-03

Joint ci ratio: 1.073711e-01	ci left: 4.185755e-03	ci right 4.663896e-03	k: 1326	n:300000
Cons ci ratio: 7.438471e-03	ci left: 4.789240e-01	ci right 4.825030e-01	k: 144214	n:300000
KS ci ratio: 1.486287e-01	ci left: 2.141370e-03	ci right 2.488356e-03	k: 693	n:300000
ZNF57   300000 perm   94 sec   (3180 perm/sec)   p_kst 2.310000e-03   p_cons 4.807133e-01   p_joint 4.420000e-03

Joint ci ratio: 1.077874e-01	ci left: 4.019322e-03	ci right 4.480344e-03	k: 1316	n:310000
Cons ci ratio: 7.315109e-03	ci left: 4.791172e-01	ci right 4.826380e-01	k: 149072	n:310000
KS ci ratio: 1.462255e-01	ci left: 2.143750e-03	ci right 2.485015e-03	k: 716	n:310000
ZNF57   310000 perm   99 sec   (3133 perm/sec)   p_kst 2.309677e-03   p_cons 4.808774e-01   p_joint 4.245161e-03

Joint ci ratio: 1.056802e-01	ci left: 4.054926e-03	ci right 4.510373e-03	k: 1369	n:320000
Cons ci ratio: 7.199759e-03	ci left: 4.791550e-01	ci right 4.826203e-01	k: 153884	n:320000
KS ci ratio: 1.432576e-01	ci left: 2.167115e-03	ci right 2.504499e-03	k: 746	n:320000
ZNF57   320000 perm   104 sec   (3091 perm/sec)   p_kst 2.331250e-03   p_cons 4.808875e-01   p_joint 4.278125e-03

Joint ci ratio: 1.013917e-01	ci left: 4.280394e-03	ci right 4.740495e-03	k: 1487	n:330000
Cons ci ratio: 7.089225e-03	ci left: 4.792243e-01	ci right 4.826367e-01	k: 158707	n:330000
KS ci ratio: 1.411019e-01	ci left: 2.168663e-03	ci right 2.500779e-03	k: 769	n:330000
ZNF57   330000 perm   108 sec   (3045 perm/sec)   p_kst 2.330303e-03   p_cons 4.809303e-01   p_joint 4.506061e-03

Joint ci ratio: 1.022650e-01	ci left: 4.082822e-03	ci right 4.525692e-03	k: 1462	n:340000
Cons ci ratio: 6.979724e-03	ci left: 4.795692e-01	ci right 4.829311e-01	k: 163625	n:340000
KS ci ratio: 1.396599e-01	ci left: 2.150283e-03	ci right 2.475939e-03	k: 785	n:340000
ZNF57   340000 perm   113 sec   (3005 perm/sec)   p_kst 2.308824e-03   p_cons 4.812500e-01   p_joint 4.300000e-03

Joint ci ratio: 9.877281e-02	ci left: 4.258648e-03	ci right 4.703903e-03	k: 1567	n:350000
Cons ci ratio: 6.878682e-03	ci left: 4.796377e-01	ci right 4.829512e-01	k: 168453	n:350000
KS ci ratio: 1.372359e-01	ci left: 2.166077e-03	ci right 2.487966e-03	k: 813	n:350000
ZNF57   350000 perm   118 sec   (2966 perm/sec)   p_kst 2.322857e-03   p_cons 4.812943e-01   p_joint 4.477143e-03

Joint ci ratio: 9.974189e-02	ci left: 4.059067e-03	ci right 4.487862e-03	k: 1537	n:360000
Cons ci ratio: 6.784131e-03	ci left: 4.795388e-01	ci right 4.828059e-01	k: 173222	n:360000
KS ci ratio: 1.360725e-01	ci left: 2.143465e-03	ci right 2.459076e-03	k: 827	n:360000
ZNF57   360000 perm   123 sec   (2928 perm/sec)   p_kst 2.297222e-03   p_cons 4.811722e-01   p_joint 4.269444e-03

Joint ci ratio: 9.822026e-02	ci left: 4.075882e-03	ci right 4.499507e-03	k: 1585	n:370000
Cons ci ratio: 6.688847e-03	ci left: 4.797834e-01	ci right 4.830061e-01	k: 178116	n:370000
KS ci ratio: 1.342211e-01	ci left: 2.145594e-03	ci right 2.456877e-03	k: 850	n:370000
ZNF57   370000 perm   128 sec   (2893 perm/sec)   p_kst 2.297297e-03   p_cons 4.813946e-01   p_joint 4.283784e-03

Joint ci ratio: 9.691524e-02	ci left: 4.079019e-03	ci right 4.497016e-03	k: 1628	n:380000
Cons ci ratio: 6.601918e-03	ci left: 4.796786e-01	ci right 4.828585e-01	k: 182882	n:380000
KS ci ratio: 1.323674e-01	ci left: 2.150184e-03	ci right 2.457485e-03	k: 874	n:380000
ZNF57   380000 perm   133 sec   (2856 perm/sec)   p_kst 2.300000e-03   p_cons 4.812684e-01   p_joint 4.284211e-03

Joint ci ratio: 1.009177e-01	ci left: 3.659301e-03	ci right 4.050691e-03	k: 1502	n:390000
Cons ci ratio: 6.516016e-03	ci left: 4.797538e-01	ci right 4.828926e-01	k: 187716	n:390000
KS ci ratio: 1.308073e-01	ci left: 2.147124e-03	ci right 2.450090e-03	k: 895	n:390000
ZNF57   390000 perm   138 sec   (2821 perm/sec)   p_kst 2.294872e-03   p_cons 4.813231e-01   p_joint 3.851282e-03

Joint ci ratio: 9.492769e-02	ci left: 4.043427e-03	ci right 4.448807e-03	k: 1697	n:400000
Cons ci ratio: 6.434606e-03	ci left: 4.797305e-01	ci right 4.828298e-01	k: 192512	n:400000
KS ci ratio: 1.288793e-01	ci left: 2.158754e-03	ci right 2.458528e-03	k: 922	n:400000
ZNF57   400000 perm   143 sec   (2788 perm/sec)   p_kst 2.305000e-03   p_cons 4.812800e-01   p_joint 4.242500e-03

Joint ci ratio: 9.372099e-02	ci left: 4.049593e-03	ci right 4.450146e-03	k: 1741	n:410000
Cons ci ratio: 6.353907e-03	ci left: 4.798866e-01	ci right 4.829478e-01	k: 197381	n:410000
KS ci ratio: 1.274380e-01	ci left: 2.155679e-03	ci right 2.451425e-03	k: 943	n:410000
ZNF57   410000 perm   149 sec   (2757 perm/sec)   p_kst 2.300000e-03   p_cons 4.814171e-01   p_joint 4.246341e-03

Joint ci ratio: 9.308404e-02	ci left: 4.008978e-03	ci right 4.402672e-03	k: 1765	n:420000
Cons ci ratio: 6.278683e-03	ci left: 4.798355e-01	ci right 4.828600e-01	k: 202166	n:420000
KS ci ratio: 1.263067e-01	ci left: 2.143544e-03	ci right 2.434819e-03	k: 960	n:420000
ZNF57   420000 perm   154 sec   (2726 perm/sec)   p_kst 2.285714e-03   p_cons 4.813476e-01   p_joint 4.202381e-03

Joint ci ratio: 9.174208e-02	ci left: 4.033884e-03	ci right 4.424006e-03	k: 1817	n:430000
Cons ci ratio: 6.203353e-03	ci left: 4.800055e-01	ci right 4.829947e-01	k: 207045	n:430000
KS ci ratio: 1.248218e-01	ci left: 2.145502e-03	ci right 2.433363e-03	k: 983	n:430000
ZNF57   430000 perm   160 sec   (2695 perm/sec)   p_kst 2.286047e-03   p_cons 4.815000e-01   p_joint 4.225581e-03

Joint ci ratio: 9.057822e-02	ci left: 4.046588e-03	ci right 4.432712e-03	k: 1864	n:440000
Cons ci ratio: 6.131618e-03	ci left: 4.800908e-01	ci right 4.830458e-01	k: 211890	n:440000
KS ci ratio: 1.232655e-01	ci left: 2.151796e-03	ci right 2.436639e-03	k: 1008	n:440000
ZNF57   440000 perm   165 sec   (2665 perm/sec)   p_kst 2.290909e-03   p_cons 4.815682e-01   p_joint 4.236364e-03

Joint ci ratio: 9.442137e-02	ci left: 3.635344e-03	ci right 3.997758e-03	k: 1716	n:450000
Cons ci ratio: 6.063071e-03	ci left: 4.801102e-01	ci right 4.830322e-01	k: 216707	n:450000
KS ci ratio: 1.220621e-01	ci left: 2.147059e-03	ci right 2.428299e-03	k: 1028	n:450000
ZNF57   450000 perm   171 sec   (2635 perm/sec)   p_kst 2.284444e-03   p_cons 4.815711e-01   p_joint 3.813333e-03

Joint ci ratio: 9.600974e-02	ci left: 3.437457e-03	ci right 3.786232e-03	k: 1660	n:460000
Cons ci ratio: 5.994867e-03	ci left: 4.802877e-01	ci right 4.831777e-01	k: 221597	n:460000
KS ci ratio: 1.208933e-01	ci left: 2.142541e-03	ci right 2.420310e-03	k: 1048	n:460000
ZNF57   460000 perm   177 sec   (2605 perm/sec)   p_kst 2.278261e-03   p_cons 4.817326e-01   p_joint 3.608696e-03

Joint ci ratio: 9.492979e-02	ci left: 3.443241e-03	ci right 3.788455e-03	k: 1698	n:470000
Cons ci ratio: 5.931365e-03	ci left: 4.802514e-01	ci right 4.831105e-01	k: 226390	n:470000
KS ci ratio: 1.194777e-01	ci left: 2.148548e-03	ci right 2.423603e-03	k: 1073	n:470000
ZNF57   470000 perm   182 sec   (2576 perm/sec)   p_kst 2.282979e-03   p_cons 4.816809e-01   p_joint 3.612766e-03

Joint ci ratio: 9.383129e-02	ci left: 3.452874e-03	ci right 3.794827e-03	k: 1738	n:480000
Cons ci ratio: 5.869495e-03	ci left: 4.802460e-01	ci right 4.830751e-01	k: 231197	n:480000
KS ci ratio: 1.179494e-01	ci left: 2.160388e-03	ci right 2.433175e-03	k: 1101	n:480000
ZNF57   480000 perm   188 sec   (2548 perm/sec)   p_kst 2.293750e-03   p_cons 4.816604e-01   p_joint 3.620833e-03

Joint ci ratio: 9.279624e-02	ci left: 3.460142e-03	ci right 3.798830e-03	k: 1777	n:490000
Cons ci ratio: 5.809736e-03	ci left: 4.802225e-01	ci right 4.830226e-01	k: 235995	n:490000
KS ci ratio: 1.168416e-01	ci left: 2.157897e-03	ci right 2.427634e-03	k: 1122	n:490000
ZNF57   490000 perm   194 sec   (2520 perm/sec)   p_kst 2.289796e-03   p_cons 4.816224e-01   p_joint 3.626531e-03

Joint ci ratio: 9.204927e-02	ci left: 3.447598e-03	ci right 3.782195e-03	k: 1806	n:500000
Cons ci ratio: 5.753240e-03	ci left: 4.800722e-01	ci right 4.828441e-01	k: 240729	n:500000
KS ci ratio: 1.159169e-01	ci left: 2.149691e-03	ci right 2.416129e-03	k: 1140	n:500000
ZNF57   500000 perm   200 sec   (2494 perm/sec)   p_kst 2.280000e-03   p_cons 4.814580e-01   p_joint 3.612000e-03

Joint ci ratio: 9.087406e-02	ci left: 3.470048e-03	ci right 3.802296e-03	k: 1853	n:510000
Cons ci ratio: 5.696860e-03	ci left: 4.800592e-01	ci right 4.828038e-01	k: 245530	n:510000
KS ci ratio: 1.146180e-01	ci left: 2.157051e-03	ci right 2.421203e-03	k: 1166	n:510000
ZNF57   510000 perm   207 sec   (2467 perm/sec)   p_kst 2.286275e-03   p_cons 4.814314e-01   p_joint 3.633333e-03

Joint ci ratio: 9.010021e-02	ci left: 3.463462e-03	ci right 3.792107e-03	k: 1885	n:520000
Cons ci ratio: 5.641672e-03	ci left: 4.800853e-01	ci right 4.828033e-01	k: 250351	n:520000
KS ci ratio: 1.136966e-01	ci left: 2.151064e-03	ci right 2.412224e-03	k: 1185	n:520000
ZNF57   520000 perm   213 sec   (2439 perm/sec)   p_kst 2.278846e-03   p_cons 4.814442e-01   p_joint 3.625000e-03

Joint ci ratio: 9.073311e-02	ci left: 3.350157e-03	ci right 3.670402e-03	k: 1859	n:530000
Cons ci ratio: 5.588690e-03	ci left: 4.800540e-01	ci right 4.827462e-01	k: 255142	n:530000
KS ci ratio: 1.127502e-01	ci left: 2.147145e-03	ci right 2.405514e-03	k: 1205	n:530000
ZNF57   530000 perm   220 sec   (2411 perm/sec)   p_kst 2.273585e-03   p_cons 4.814000e-01   p_joint 3.507547e-03

Joint ci ratio: 8.984374e-02	ci left: 3.355089e-03	ci right 3.672496e-03	k: 1896	n:540000
Cons ci ratio: 5.536353e-03	ci left: 4.800980e-01	ci right 4.827652e-01	k: 259973	n:540000
KS ci ratio: 1.121023e-01	ci left: 2.132579e-03	ci right 2.387623e-03	k: 1219	n:540000
ZNF57   540000 perm   226 sec   (2385 perm/sec)   p_kst 2.257407e-03   p_cons 4.814315e-01   p_joint 3.511111e-03

Joint ci ratio: 8.916528e-02	ci left: 3.345634e-03	ci right 3.659632e-03	k: 1925	n:550000
Cons ci ratio: 5.486417e-03	ci left: 4.800532e-01	ci right 4.826960e-01	k: 264756	n:550000
KS ci ratio: 1.111051e-01	ci left: 2.132688e-03	ci right 2.385328e-03	k: 1241	n:550000
ZNF57   550000 perm   233 sec   (2360 perm/sec)   p_kst 2.256364e-03   p_cons 4.813745e-01   p_joint 3.500000e-03

Joint ci ratio: 9.566606e-02	ci left: 2.846242e-03	ci right 3.133938e-03	k: 1673	n:560000
Cons ci ratio: 5.437128e-03	ci left: 4.800727e-01	ci right 4.826918e-01	k: 269574	n:560000
KS ci ratio: 1.103091e-01	ci left: 2.125856e-03	ci right 2.375766e-03	k: 1259	n:560000
ZNF57   560000 perm   240 sec   (2333 perm/sec)   p_kst 2.248214e-03   p_cons 4.813821e-01   p_joint 2.987500e-03

Joint ci ratio: 9.440432e-02	ci left: 2.873381e-03	ci right 3.159777e-03	k: 1718	n:570000
Cons ci ratio: 5.389087e-03	ci left: 4.800968e-01	ci right 4.826928e-01	k: 274395	n:570000
KS ci ratio: 1.089758e-01	ci left: 2.141456e-03	ci right 2.389962e-03	k: 1290	n:570000
ZNF57   570000 perm   247 sec   (2311 perm/sec)   p_kst 2.263158e-03   p_cons 4.813947e-01   p_joint 3.014035e-03

Joint ci ratio: 8.638283e-02	ci left: 3.385061e-03	ci right 3.692345e-03	k: 2051	n:580000
Cons ci ratio: 5.342981e-03	ci left: 4.800565e-01	ci right 4.826299e-01	k: 279179	n:580000
KS ci ratio: 1.080178e-01	ci left: 2.143114e-03	ci right 2.389486e-03	k: 1313	n:580000
ZNF57   580000 perm   254 sec   (2288 perm/sec)   p_kst 2.263793e-03   p_cons 4.813431e-01   p_joint 3.536207e-03

Joint ci ratio: 8.446554e-02	ci left: 3.483613e-03	ci right 3.792479e-03	k: 2145	n:590000
Cons ci ratio: 5.298199e-03	ci left: 4.800023e-01	ci right 4.825538e-01	k: 283954	n:590000
KS ci ratio: 1.070446e-01	ci left: 2.146374e-03	ci right 2.390758e-03	k: 1337	n:590000
ZNF57   590000 perm   260 sec   (2265 perm/sec)   p_kst 2.266102e-03   p_cons 4.812780e-01   p_joint 3.635593e-03

Joint ci ratio: 8.361219e-02	ci left: 3.497346e-03	ci right 3.804144e-03	k: 2189	n:600000
Cons ci ratio: 5.253262e-03	ci left: 4.800700e-01	ci right 4.826002e-01	k: 288801	n:600000
KS ci ratio: 1.060971e-01	ci left: 2.149535e-03	ci right 2.391978e-03	k: 1361	n:600000
ZNF57   600000 perm   267 sec   (2244 perm/sec)   p_kst 2.268333e-03   p_cons 4.813350e-01   p_joint 3.648333e-03

Joint ci ratio: 8.415635e-02	ci left: 3.395066e-03	ci right 3.694925e-03	k: 2161	n:610000
Cons ci ratio: 5.209415e-03	ci left: 4.801388e-01	ci right 4.826482e-01	k: 293650	n:610000
KS ci ratio: 1.053269e-01	ci left: 2.146216e-03	ci right 2.386419e-03	k: 1381	n:610000
ZNF57   610000 perm   274 sec   (2223 perm/sec)   p_kst 2.263934e-03   p_cons 4.813934e-01   p_joint 3.542623e-03

Joint ci ratio: 9.041565e-02	ci left: 2.885882e-03	ci right 3.160729e-03	k: 1873	n:620000
Cons ci ratio: 5.168217e-03	ci left: 4.800540e-01	ci right 4.825430e-01	k: 298405	n:620000
KS ci ratio: 1.043867e-01	ci left: 2.150865e-03	ci right 2.389307e-03	k: 1406	n:620000
ZNF57   620000 perm   282 sec   (2201 perm/sec)   p_kst 2.267742e-03   p_cons 4.812984e-01   p_joint 3.020968e-03

Joint ci ratio: 8.989014e-02	ci left: 2.874207e-03	ci right 3.146268e-03	k: 1895	n:630000
Cons ci ratio: 5.127133e-03	ci left: 4.800544e-01	ci right 4.825236e-01	k: 303212	n:630000
KS ci ratio: 1.031470e-01	ci left: 2.169293e-03	ci right 2.406749e-03	k: 1440	n:630000
ZNF57   630000 perm   289 sec   (2180 perm/sec)   p_kst 2.285714e-03   p_cons 4.812889e-01   p_joint 3.007937e-03

Joint ci ratio: 8.911773e-02	ci left: 2.879707e-03	ci right 3.149823e-03	k: 1928	n:640000
Cons ci ratio: 5.086074e-03	ci left: 4.801471e-01	ci right 4.825969e-01	k: 308078	n:640000
KS ci ratio: 1.021240e-01	ci left: 2.179548e-03	ci right 2.415618e-03	k: 1469	n:640000
ZNF57   640000 perm   296 sec   (2160 perm/sec)   p_kst 2.295313e-03   p_cons 4.813719e-01   p_joint 3.012500e-03

Joint ci ratio: 8.868282e-02	ci left: 2.863983e-03	ci right 3.131246e-03	k: 1947	n:650000
Cons ci ratio: 5.047121e-03	ci left: 4.801246e-01	ci right 4.825555e-01	k: 312871	n:650000
KS ci ratio: 1.016762e-01	ci left: 2.165506e-03	ci right 2.398965e-03	k: 1482	n:650000
ZNF57   650000 perm   304 sec   (2140 perm/sec)   p_kst 2.280000e-03   p_cons 4.813400e-01   p_joint 2.995385e-03

Joint ci ratio: 8.776330e-02	ci left: 2.881341e-03	ci right 3.147293e-03	k: 1988	n:660000
Cons ci ratio: 5.008807e-03	ci left: 4.801272e-01	ci right 4.825396e-01	k: 317680	n:660000
KS ci ratio: 1.005959e-01	ci left: 2.179955e-03	ci right 2.412327e-03	k: 1514	n:660000
ZNF57   660000 perm   311 sec   (2120 perm/sec)   p_kst 2.293939e-03   p_cons 4.813333e-01   p_joint 3.012121e-03

Joint ci ratio: 8.710884e-02	ci left: 2.882133e-03	ci right 3.146073e-03	k: 2018	n:670000
Cons ci ratio: 4.971500e-03	ci left: 4.801149e-01	ci right 4.825092e-01	k: 322479	n:670000
KS ci ratio: 9.984091e-02	ci left: 2.180886e-03	ci right 2.411511e-03	k: 1537	n:670000
ZNF57   670000 perm   319 sec   (2101 perm/sec)   p_kst 2.294030e-03   p_cons 4.813119e-01   p_joint 3.011940e-03

Outputting figure to mutsig2_images.part000000000198/ZNF57.2_1684_670000_0.002294_0.48131_0.0030119.png
                gene_name: ZNF57
               theta_stop: 0.100 
                    nperm: 670000 
                     p_ks: 0.0023 
        ci_ks_bounds_left: 0.0022 
       ci_ks_bounds_right: 0.0024 
                   p_cons: 0.48 
      ci_cons_bounds_left: 0.48 
     ci_cons_bounds_right: 0.48 
                  p_joint: 0.0030 
     ci_joint_bounds_left: 0.0029 
    ci_joint_bounds_right: 0.0031 

Current progress: 43 percent done.
ZNF578
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.618281e-01	ci left: 9.503508e-03	ci right 1.378807e-02	k: 115	n:10000
Cons ci ratio: 2.971815e-01	ci left: 1.455775e-02	ci right 1.972903e-02	k: 170	n:10000
KS ci ratio: 1.453474e-01	ci left: 6.285242e-02	ci right 7.280114e-02	k: 677	n:10000
ZNF578   10000 perm   2 sec   (6153 perm/sec)   p_kst 6.770000e-02   p_cons 1.700000e-02   p_joint 1.150000e-02

Joint ci ratio: 3.067269e-01	ci left: 6.858491e-03	ci right 9.387653e-03	k: 161	n:20000
Cons ci ratio: 2.253759e-01	ci left: 1.321953e-02	ci right 1.662363e-02	k: 297	n:20000
KS ci ratio: 1.017359e-01	ci left: 6.557403e-02	ci right 7.265187e-02	k: 1381	n:20000
ZNF578   20000 perm   4 sec   (5412 perm/sec)   p_kst 6.905000e-02   p_cons 1.485000e-02   p_joint 8.050000e-03

Joint ci ratio: 2.374838e-01	ci left: 7.931051e-03	ci right 1.009897e-02	k: 269	n:30000
Cons ci ratio: 1.782389e-01	ci left: 1.445114e-02	ci right 1.731040e-02	k: 475	n:30000
KS ci ratio: 8.283178e-02	ci left: 6.658209e-02	ci right 7.236829e-02	k: 2083	n:30000
ZNF578   30000 perm   6 sec   (5131 perm/sec)   p_kst 6.943333e-02   p_cons 1.583333e-02   p_joint 8.966667e-03

Joint ci ratio: 2.179107e-01	ci left: 7.150356e-03	ci right 8.922184e-03	k: 320	n:40000
Cons ci ratio: 1.562042e-01	ci left: 1.428816e-02	ci right 1.673291e-02	k: 619	n:40000
KS ci ratio: 7.091081e-02	ci left: 6.845269e-02	ci right 7.350980e-02	k: 2838	n:40000
ZNF578   40000 perm   8 sec   (4947 perm/sec)   p_kst 7.095000e-02   p_cons 1.547500e-02   p_joint 8.000000e-03

Joint ci ratio: 1.827300e-01	ci left: 8.286262e-03	ci right 9.971469e-03	k: 455	n:50000
Cons ci ratio: 1.386275e-01	ci left: 1.464788e-02	ci right 1.684887e-02	k: 786	n:50000
KS ci ratio: 6.376136e-02	ci left: 6.803474e-02	ci right 7.253531e-02	k: 3513	n:50000
ZNF578   50000 perm   10 sec   (4800 perm/sec)   p_kst 7.026000e-02   p_cons 1.572000e-02   p_joint 9.100000e-03

Joint ci ratio: 1.356176e-01	ci left: 1.280124e-02	ci right 1.467957e-02	k: 823	n:60000
Cons ci ratio: 1.274712e-01	ci left: 1.452672e-02	ci right 1.652054e-02	k: 930	n:60000
KS ci ratio: 5.806392e-02	ci left: 6.854640e-02	ci right 7.266192e-02	k: 4235	n:60000
ZNF578   60000 perm   13 sec   (4681 perm/sec)   p_kst 7.058333e-02   p_cons 1.550000e-02   p_joint 1.371667e-02

Joint ci ratio: 1.270626e-01	ci left: 1.256130e-02	ci right 1.427938e-02	k: 938	n:70000
Cons ci ratio: 1.136397e-01	ci left: 1.576364e-02	ci right 1.767673e-02	k: 1169	n:70000
KS ci ratio: 5.369253e-02	ci left: 6.885417e-02	ci right 7.266722e-02	k: 4952	n:70000
ZNF578   70000 perm   15 sec   (4568 perm/sec)   p_kst 7.074286e-02   p_cons 1.670000e-02   p_joint 1.340000e-02

Joint ci ratio: 1.275837e-01	ci left: 1.091793e-02	ci right 1.241780e-02	k: 932	n:80000
Cons ci ratio: 1.060643e-01	ci left: 1.589637e-02	ci right 1.768892e-02	k: 1342	n:80000
KS ci ratio: 5.028492e-02	ci left: 6.882196e-02	ci right 7.238426e-02	k: 5647	n:80000
ZNF578   80000 perm   18 sec   (4469 perm/sec)   p_kst 7.058750e-02   p_cons 1.677500e-02   p_joint 1.165000e-02

Joint ci ratio: 1.011928e-01	ci left: 1.556945e-02	ci right 1.723970e-02	k: 1475	n:90000
Cons ci ratio: 1.008461e-01	ci left: 1.567780e-02	ci right 1.735357e-02	k: 1485	n:90000
KS ci ratio: 4.739707e-02	ci left: 6.895676e-02	ci right 7.231542e-02	k: 6356	n:90000
ZNF578   90000 perm   21 sec   (4375 perm/sec)   p_kst 7.062222e-02   p_cons 1.650000e-02   p_joint 1.638889e-02

Joint ci ratio: 7.886528e-02	ci left: 2.315831e-02	ci right 2.506943e-02	k: 2410	n:100000
Cons ci ratio: 9.597027e-02	ci left: 1.562186e-02	ci right 1.720637e-02	k: 1640	n:100000
KS ci ratio: 4.484652e-02	ci left: 6.938598e-02	ci right 7.257896e-02	k: 7097	n:100000
ZNF578   100000 perm   23 sec   (4281 perm/sec)   p_kst 7.097000e-02   p_cons 1.640000e-02   p_joint 2.410000e-02

Outputting figure to mutsig2_images.part000000000198/ZNF578.2_1785_100000_0.07097_0.0164_0.0241.png
                gene_name: ZNF578
               theta_stop: 0.096 
                    nperm: 100000 
                     p_ks: 0.071 
        ci_ks_bounds_left: 0.069 
       ci_ks_bounds_right: 0.073 
                   p_cons: 0.016 
      ci_cons_bounds_left: 0.016 
     ci_cons_bounds_right: 0.017 
                  p_joint: 0.024 
     ci_joint_bounds_left: 0.023 
    ci_joint_bounds_right: 0.025 

Current progress: 57 percent done.
ZNF598
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.693080e-03	ci left: 9.938690e-01	ci right 9.966303e-01	k: 9954	n:10000
KS ci ratio: 2.310239e-02	ci left: 7.335069e-01	ci right 7.507518e-01	k: 7422	n:10000
ZNF598   10000 perm   2 sec   (5863 perm/sec)   p_kst 7.422000e-01   p_cons 9.954000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000198/ZNF598.2_2765_10000_0.7422_0.9954_1.png
                gene_name: ZNF598
               theta_stop: 0.023 
                    nperm: 10000 
                     p_ks: 0.74 
        ci_ks_bounds_left: 0.73 
       ci_ks_bounds_right: 0.75 
                   p_cons: 1.00 
      ci_cons_bounds_left: 0.99 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 71 percent done.
ZNF624
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.697756e-03	ci left: 9.764223e-01	ci right 9.820937e-01	k: 9794	n:10000
Cons ci ratio: 1.438252e-02	ci left: 8.749018e-01	ci right 8.876752e-01	k: 8814	n:10000
KS ci ratio: 1.648225e-02	ci left: 8.426459e-01	ci right 8.567497e-01	k: 8498	n:10000
ZNF624   10000 perm   2 sec   (5650 perm/sec)   p_kst 8.498000e-01   p_cons 8.814000e-01   p_joint 9.794000e-01

Outputting figure to mutsig2_images.part000000000198/ZNF624.2_2618_10000_0.8498_0.8814_0.9794.png
                gene_name: ZNF624
               theta_stop: 0.016 
                    nperm: 10000 
                     p_ks: 0.85 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.86 
                   p_cons: 0.88 
      ci_cons_bounds_left: 0.87 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.98 
     ci_joint_bounds_left: 0.98 
    ci_joint_bounds_right: 0.98 

Current progress: 86 percent done.
ZNF626
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.607495e-02	ci left: 2.017565e-01	ci right 2.178129e-01	k: 2097	n:10000
Cons ci ratio: 3.802042e-02	ci left: 5.053515e-01	ci right 5.250397e-01	k: 5152	n:10000
KS ci ratio: 8.020691e-02	ci left: 1.850099e-01	ci right 2.005695e-01	k: 1927	n:10000
ZNF626   10000 perm   2 sec   (6310 perm/sec)   p_kst 1.927000e-01   p_cons 5.152000e-01   p_joint 2.097000e-01

Outputting figure to mutsig2_images.part000000000198/ZNF626.2_1660_10000_0.1927_0.5152_0.2097.png
                gene_name: ZNF626
               theta_stop: 0.080 
                    nperm: 10000 
                     p_ks: 0.19 
        ci_ks_bounds_left: 0.19 
       ci_ks_bounds_right: 0.20 
                   p_cons: 0.52 
      ci_cons_bounds_left: 0.51 
     ci_cons_bounds_right: 0.53 
                  p_joint: 0.21 
     ci_joint_bounds_left: 0.20 
    ci_joint_bounds_right: 0.22 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000198
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 198 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1641>
Subject: Job 8704430: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1641>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000199> was used as the working directory.
Started at Thu Nov 15 19:38:17 2012
Results reported at Thu Nov 15 20:12:44 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000199.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000199.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 199  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000199.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :   2124.15 sec.
    Max Memory :      6058 MB
    Max Swap   :      8435 MB

    Max Processes  :         7
    Max Threads    :        59

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
199
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 199
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 199: processing genes 17913 - 18003
Calculating significance of each gene.
Using projection method.
17913	ZNF665	9.626944e-02
17914	ZNF667	1
17915	ZNF668	9.201357e-02
17916	ZNF669	1
17917	ZNF670	1
17918	ZNF671	1
17919	ZNF672	1
17920	ZNF673	1
17921	ZNF674	1
17922	ZNF675	1
17923	ZNF676	1
17924	ZNF677	9.978145e-02
17925	ZNF678	1.141549e-01
17926	ZNF679	1
17927	ZNF680	1
17928	ZNF681	1.855958e-01
17929	ZNF682	1
17930	ZNF683	1
17931	ZNF684	1
17932	ZNF687	1
17933	ZNF688	1
17934	ZNF689	1
17935	ZNF69	1
17936	ZNF691	1
17937	ZNF692	1.884368e-01
17938	ZNF695	1
17939	ZNF696	1
17940	ZNF697	1
17941	ZNF699	1
17942	ZNF7	1
17943	ZNF70	1
17944	ZNF700	1.374945e-02
17945	ZNF701	1
17946	ZNF704	8.086272e-03
17947	ZNF705A	1
17948	ZNF706	1
17949	ZNF707	1
17950	ZNF708	1
17951	ZNF709	2.155520e-01
17952	ZNF71	1
17953	ZNF710	1
17954	ZNF711	1
17955	ZNF713	1.357979e-01
17956	ZNF714	1.606146e-01
17957	ZNF716	1
17958	ZNF718	1
17959	ZNF720	1
17960	ZNF721	3.454593e-01
17961	ZNF732	1
17962	ZNF735	1
17963	ZNF736	1
17964	ZNF737	1.881583e-02
17965	ZNF74	1
17966	ZNF740	1
17967	ZNF746	1
17968	ZNF747	1
17969	ZNF749	1.303643e-02
17970	ZNF750	1
17971	ZNF75A	1
17972	ZNF75D	1
17973	ZNF76	1
17974	ZNF761	1
17975	ZNF763	1
17976	ZNF764	1
17977	ZNF765	1
17978	ZNF766	1
17979	ZNF768	1
17980	ZNF77	1
17981	ZNF770	8.007741e-02
17982	ZNF772	1
17983	ZNF773	1
17984	ZNF774	1
17985	ZNF775	1
17986	ZNF776	1
17987	ZNF777	1.436866e-02
17988	ZNF778	1
17989	ZNF780A	2.088674e-04
17990	ZNF780B	1
17991	ZNF781	1
17992	ZNF782	1
17993	ZNF784	2.614068e-02
17994	ZNF785	1
17995	ZNF786	1
17996	ZNF787	1
17997	ZNF789	1
17998	ZNF79	1
17999	ZNF790	1.261668e-01
18000/18093 18000	ZNF791	2.130541e-01
18001	ZNF792	1
18002	ZNF793	1
18003	ZNF799	6.797287e-06
Done

Running MutSig 2:
Scatter job 199: processing genes 17913 - 18003
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZNF799
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.177074e-01	ci left: 2.797424e-02	ci right 3.490226e-02	k: 313	n:10000
Cons ci ratio: 5.335816e-03	ci left: 9.790923e-01	ci right 9.844218e-01	k: 9819	n:10000
KS ci ratio: 3.940154e-01	ci left: 7.872887e-03	ci right 1.182054e-02	k: 97	n:10000
ZNF799   10000 perm   2 sec   (5918 perm/sec)   p_kst 9.700000e-03   p_cons 9.819000e-01   p_joint 3.130000e-02

Joint ci ratio: 1.254441e-01	ci left: 4.362287e-02	ci right 4.950986e-02	k: 930	n:20000
Cons ci ratio: 3.784012e-03	ci left: 9.797983e-01	ci right 9.835598e-01	k: 19635	n:20000
KS ci ratio: 2.575473e-01	ci left: 9.975082e-03	ci right 1.296948e-02	k: 228	n:20000
ZNF799   20000 perm   7 sec   (2771 perm/sec)   p_kst 1.140000e-02   p_cons 9.817500e-01   p_joint 4.650000e-02

Joint ci ratio: 8.296020e-02	ci left: 6.638595e-02	ci right 7.216447e-02	k: 2077	n:30000
Cons ci ratio: 3.232890e-03	ci left: 9.783864e-01	ci right 9.815863e-01	k: 29401	n:30000
KS ci ratio: 2.136156e-01	ci left: 9.913730e-03	ci right 1.231569e-02	k: 332	n:30000
ZNF799   30000 perm   9 sec   (3222 perm/sec)   p_kst 1.106667e-02   p_cons 9.800333e-01   p_joint 6.923333e-02

Joint ci ratio: 7.683169e-02	ci left: 5.874768e-02	ci right 6.346628e-02	k: 2443	n:40000
Cons ci ratio: 2.803393e-03	ci left: 9.785543e-01	ci right 9.813254e-01	k: 39199	n:40000
KS ci ratio: 1.871401e-01	ci left: 9.834062e-03	ci right 1.188788e-02	k: 433	n:40000
ZNF799   40000 perm   11 sec   (3496 perm/sec)   p_kst 1.082500e-02   p_cons 9.799750e-01   p_joint 6.107500e-02

Joint ci ratio: 7.820897e-02	ci left: 4.596593e-02	ci right 4.972679e-02	k: 2391	n:50000
Cons ci ratio: 2.359876e-03	ci left: 9.810233e-01	ci right 9.833603e-01	k: 49111	n:50000
KS ci ratio: 1.679322e-01	ci left: 9.874175e-03	ci right 1.170329e-02	k: 538	n:50000
ZNF799   50000 perm   14 sec   (3639 perm/sec)   p_kst 1.076000e-02   p_cons 9.822200e-01   p_joint 4.782000e-02

Joint ci ratio: 7.025077e-02	ci left: 4.759761e-02	ci right 5.107948e-02	k: 2959	n:60000
Cons ci ratio: 2.153253e-03	ci left: 9.811443e-01	ci right 9.832753e-01	k: 58934	n:60000
KS ci ratio: 1.535167e-01	ci left: 9.924221e-03	ci right 1.159028e-02	k: 644	n:60000
ZNF799   60000 perm   16 sec   (3722 perm/sec)   p_kst 1.073333e-02   p_cons 9.822333e-01   p_joint 4.931667e-02

Joint ci ratio: 7.168189e-02	ci left: 3.950086e-02	ci right 4.245163e-02	k: 2867	n:70000
Cons ci ratio: 1.991226e-03	ci left: 9.812665e-01	ci right 9.832361e-01	k: 68759	n:70000
KS ci ratio: 1.419861e-01	ci left: 1.000615e-02	ci right 1.154910e-02	k: 753	n:70000
ZNF799   70000 perm   18 sec   (3784 perm/sec)   p_kst 1.075714e-02   p_cons 9.822714e-01   p_joint 4.095714e-02

Joint ci ratio: 8.512102e-02	ci left: 2.472462e-02	ci right 2.693495e-02	k: 2065	n:80000
Cons ci ratio: 1.977310e-03	ci left: 9.790700e-01	ci right 9.810200e-01	k: 78405	n:80000
KS ci ratio: 1.333420e-01	ci left: 9.974413e-03	ci right 1.141140e-02	k: 854	n:80000
ZNF799   80000 perm   21 sec   (3779 perm/sec)   p_kst 1.067500e-02   p_cons 9.800625e-01   p_joint 2.581250e-02

Joint ci ratio: 7.668994e-02	ci left: 2.712814e-02	ci right 2.930241e-02	k: 2538	n:90000
Cons ci ratio: 1.873481e-03	ci left: 9.789279e-01	ci right 9.807744e-01	k: 88188	n:90000
KS ci ratio: 1.249227e-01	ci left: 1.014574e-02	ci right 1.150829e-02	k: 973	n:90000
ZNF799   90000 perm   24 sec   (3766 perm/sec)   p_kst 1.081111e-02   p_cons 9.798667e-01   p_joint 2.820000e-02

Joint ci ratio: 6.902980e-02	ci left: 3.016055e-02	ci right 3.232675e-02	k: 3123	n:100000
Cons ci ratio: 1.776695e-03	ci left: 9.789907e-01	ci right 9.807413e-01	k: 97988	n:100000
KS ci ratio: 1.184139e-01	ci left: 1.019772e-02	ci right 1.149089e-02	k: 1083	n:100000
ZNF799   100000 perm   27 sec   (3757 perm/sec)   p_kst 1.083000e-02   p_cons 9.798800e-01   p_joint 3.123000e-02

Joint ci ratio: 6.970719e-02	ci left: 2.697045e-02	ci right 2.892727e-02	k: 3073	n:110000
Cons ci ratio: 1.704798e-03	ci left: 9.787751e-01	ci right 9.804540e-01	k: 107759	n:110000
KS ci ratio: 1.126837e-01	ci left: 1.026826e-02	ci right 1.150318e-02	k: 1196	n:110000
ZNF799   110000 perm   29 sec   (3743 perm/sec)   p_kst 1.087273e-02   p_cons 9.796273e-01   p_joint 2.793636e-02

Joint ci ratio: 6.516185e-02	ci left: 2.832023e-02	ci right 3.023594e-02	k: 3512	n:120000
Cons ci ratio: 1.631603e-03	ci left: 9.788268e-01	ci right 9.804333e-01	k: 117557	n:120000
KS ci ratio: 1.081303e-01	ci left: 1.024720e-02	ci right 1.142662e-02	k: 1299	n:120000
ZNF799   120000 perm   32 sec   (3733 perm/sec)   p_kst 1.082500e-02   p_cons 9.796417e-01   p_joint 2.926667e-02

Joint ci ratio: 6.105881e-02	ci left: 2.979164e-02	ci right 3.167552e-02	k: 3994	n:130000
Cons ci ratio: 1.571017e-03	ci left: 9.787699e-01	ci right 9.803163e-01	k: 127342	n:130000
KS ci ratio: 1.034559e-01	ci left: 1.035764e-02	ci right 1.149510e-02	k: 1419	n:130000
ZNF799   130000 perm   35 sec   (3672 perm/sec)   p_kst 1.091538e-02   p_cons 9.795538e-01   p_joint 3.072308e-02

Joint ci ratio: 6.062213e-02	ci left: 2.812015e-02	ci right 2.988515e-02	k: 4059	n:140000
Cons ci ratio: 1.511567e-03	ci left: 9.788605e-01	ci right 9.803482e-01	k: 137146	n:140000
KS ci ratio: 9.933958e-02	ci left: 1.045325e-02	ci right 1.155286e-02	k: 1539	n:140000
ZNF799   140000 perm   38 sec   (3656 perm/sec)   p_kst 1.099286e-02   p_cons 9.796143e-01   p_joint 2.899286e-02

Outputting figure to mutsig2_images.part000000000199/ZNF799.5_1948_140000_0.010993_0.97961_0.028993.png
                gene_name: ZNF799
               theta_stop: 0.099 
                    nperm: 140000 
                     p_ks: 0.011 
        ci_ks_bounds_left: 0.010 
       ci_ks_bounds_right: 0.012 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.98 
                  p_joint: 0.029 
     ci_joint_bounds_left: 0.028 
    ci_joint_bounds_right: 0.030 

Current progress: 14 percent done.
ZNF780A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 7.637447e-02	ci left: 2.004751e-01	ci right 2.164950e-01	k: 2084	n:10000
Cons ci ratio: 9.953727e-03	ci left: 9.346478e-01	ci right 9.440942e-01	k: 9395	n:10000
KS ci ratio: 1.277887e-01	ci left: 8.047904e-02	ci right 9.156351e-02	k: 859	n:10000
ZNF780A   10000 perm   2 sec   (6165 perm/sec)   p_kst 8.590000e-02   p_cons 9.395000e-01   p_joint 2.084000e-01

Joint ci ratio: 5.036807e-02	ci left: 2.265607e-01	ci right 2.383172e-01	k: 4648	n:20000
Cons ci ratio: 6.657231e-03	ci left: 9.422636e-01	ci right 9.486061e-01	k: 18910	n:20000
KS ci ratio: 9.120586e-02	ci left: 8.068090e-02	ci right 8.844038e-02	k: 1690	n:20000
ZNF780A   20000 perm   4 sec   (5467 perm/sec)   p_kst 8.450000e-02   p_cons 9.455000e-01   p_joint 2.324000e-01

Outputting figure to mutsig2_images.part000000000199/ZNF780A.4_2124_20000_0.0845_0.9455_0.2324.png
                gene_name: ZNF780A
               theta_stop: 0.091 
                    nperm: 20000 
                     p_ks: 0.085 
        ci_ks_bounds_left: 0.081 
       ci_ks_bounds_right: 0.088 
                   p_cons: 0.95 
      ci_cons_bounds_left: 0.94 
     ci_cons_bounds_right: 0.95 
                  p_joint: 0.23 
     ci_joint_bounds_left: 0.23 
    ci_joint_bounds_right: 0.24 

Current progress: 29 percent done.
ZNF700
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 1.129536e-02	ci left: 9.180131e-01	ci right 9.285388e-01	k: 9234	n:10000
KS ci ratio: 2.571600e-02	ci left: 6.900036e-01	ci right 7.080803e-01	k: 6991	n:10000
ZNF700   10000 perm   2 sec   (5702 perm/sec)   p_kst 6.991000e-01   p_cons 9.234000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000199/ZNF700.2_2245_10000_0.6991_0.9234_1.png
                gene_name: ZNF700
               theta_stop: 0.026 
                    nperm: 10000 
                     p_ks: 0.70 
        ci_ks_bounds_left: 0.69 
       ci_ks_bounds_right: 0.71 
                   p_cons: 0.92 
      ci_cons_bounds_left: 0.92 
     ci_cons_bounds_right: 0.93 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 43 percent done.
ZNF704
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 1.011330e+00	ci left: 7.655977e-04	ci right 2.347848e-03	k: 14	n:10000
Cons ci ratio: 2.349480e-02	ci left: 7.269395e-01	ci right 7.443230e-01	k: 7357	n:10000
KS ci ratio: 1.481028e+00	ci left: 2.202202e-04	ci right 1.305486e-03	k: 6	n:10000
ZNF704   10000 perm   2 sec   (6543 perm/sec)   p_kst 6.000000e-04   p_cons 7.357000e-01   p_joint 1.400000e-03

Joint ci ratio: 1.086832e+00	ci left: 3.100660e-04	ci right 1.047844e-03	k: 12	n:20000
Cons ci ratio: 1.677380e-02	ci left: 7.257528e-01	ci right 7.380797e-01	k: 14639	n:20000
KS ci ratio: 1.086832e+00	ci left: 3.100660e-04	ci right 1.047844e-03	k: 12	n:20000
ZNF704   20000 perm   4 sec   (5502 perm/sec)   p_kst 6.000000e-04   p_cons 7.319500e-01   p_joint 6.000000e-04

Joint ci ratio: 7.998332e-01	ci left: 4.860610e-04	ci right 1.150156e-03	k: 23	n:30000
Cons ci ratio: 1.365453e-02	ci left: 7.280890e-01	ci right 7.381325e-01	k: 21994	n:30000
KS ci ratio: 7.998332e-01	ci left: 4.860610e-04	ci right 1.150156e-03	k: 23	n:30000
ZNF704   30000 perm   6 sec   (5268 perm/sec)   p_kst 7.666667e-04   p_cons 7.331333e-01   p_joint 7.666667e-04

Joint ci ratio: 7.541403e-01	ci left: 4.246441e-04	ci right 9.522566e-04	k: 26	n:40000
Cons ci ratio: 1.178541e-02	ci left: 7.300927e-01	ci right 7.387732e-01	k: 29378	n:40000
KS ci ratio: 7.541403e-01	ci left: 4.246441e-04	ci right 9.522566e-04	k: 26	n:40000
ZNF704   40000 perm   8 sec   (5016 perm/sec)   p_kst 6.500000e-04   p_cons 7.344500e-01   p_joint 6.500000e-04

Joint ci ratio: 7.038275e-01	ci left: 4.048529e-04	ci right 8.564274e-04	k: 30	n:50000
Cons ci ratio: 1.053662e-02	ci left: 7.307263e-01	ci right 7.384864e-01	k: 36731	n:50000
KS ci ratio: 7.038275e-01	ci left: 4.048529e-04	ci right 8.564274e-04	k: 30	n:50000
ZNF704   50000 perm   10 sec   (4916 perm/sec)   p_kst 6.000000e-04   p_cons 7.346200e-01   p_joint 6.000000e-04

Joint ci ratio: 6.357013e-01	ci left: 4.342262e-04	ci right 8.498946e-04	k: 37	n:60000
Cons ci ratio: 9.640044e-03	ci left: 7.301938e-01	ci right 7.372836e-01	k: 44025	n:60000
KS ci ratio: 6.357013e-01	ci left: 4.342262e-04	ci right 8.498946e-04	k: 37	n:60000
ZNF704   60000 perm   12 sec   (4835 perm/sec)   p_kst 6.166667e-04   p_cons 7.337500e-01   p_joint 6.166667e-04

Joint ci ratio: 5.841671e-01	ci left: 4.567570e-04	ci right 8.437370e-04	k: 44	n:70000
Cons ci ratio: 8.917611e-03	ci left: 7.307816e-01	ci right 7.373419e-01	k: 51385	n:70000
KS ci ratio: 5.841671e-01	ci left: 4.567570e-04	ci right 8.437370e-04	k: 44	n:70000
ZNF704   70000 perm   15 sec   (4755 perm/sec)   p_kst 6.285714e-04   p_cons 7.340714e-01   p_joint 6.285714e-04

Joint ci ratio: 5.487314e-01	ci left: 4.639215e-04	ci right 8.239026e-04	k: 50	n:80000
Cons ci ratio: 8.328504e-03	ci left: 7.316134e-01	ci right 7.377446e-01	k: 58775	n:80000
KS ci ratio: 5.487314e-01	ci left: 4.639215e-04	ci right 8.239026e-04	k: 50	n:80000
ZNF704   80000 perm   17 sec   (4676 perm/sec)   p_kst 6.250000e-04   p_cons 7.346875e-01   p_joint 6.250000e-04

Joint ci ratio: 5.101704e-01	ci left: 4.893889e-04	ci right 8.330153e-04	k: 58	n:90000
Cons ci ratio: 7.853731e-03	ci left: 7.317133e-01	ci right 7.374937e-01	k: 66115	n:90000
KS ci ratio: 5.101704e-01	ci left: 4.893889e-04	ci right 8.330153e-04	k: 58	n:90000
ZNF704   90000 perm   20 sec   (4596 perm/sec)   p_kst 6.444444e-04   p_cons 7.346111e-01   p_joint 6.444444e-04

Joint ci ratio: 4.752058e-01	ci left: 5.192773e-04	ci right 8.507994e-04	k: 67	n:100000
Cons ci ratio: 7.453593e-03	ci left: 7.317111e-01	ci right 7.371953e-01	k: 73446	n:100000
KS ci ratio: 4.752058e-01	ci left: 5.192773e-04	ci right 8.507994e-04	k: 67	n:100000
ZNF704   100000 perm   22 sec   (4525 perm/sec)   p_kst 6.700000e-04   p_cons 7.344600e-01   p_joint 6.700000e-04

Joint ci ratio: 4.524862e-01	ci left: 5.282714e-04	ci right 8.444749e-04	k: 74	n:110000
Cons ci ratio: 7.106823e-03	ci left: 7.318341e-01	ci right 7.370627e-01	k: 80790	n:110000
KS ci ratio: 4.524862e-01	ci left: 5.282714e-04	ci right 8.444749e-04	k: 74	n:110000
ZNF704   110000 perm   25 sec   (4460 perm/sec)   p_kst 6.727273e-04   p_cons 7.344545e-01   p_joint 6.727273e-04

Joint ci ratio: 4.201140e-01	ci left: 5.732796e-04	ci right 8.850030e-04	k: 86	n:120000
Cons ci ratio: 6.809143e-03	ci left: 7.316657e-01	ci right 7.366730e-01	k: 88101	n:120000
KS ci ratio: 4.201140e-01	ci left: 5.732796e-04	ci right 8.850030e-04	k: 86	n:120000
ZNF704   120000 perm   27 sec   (4396 perm/sec)   p_kst 7.166667e-04   p_cons 7.341750e-01   p_joint 7.166667e-04

Joint ci ratio: 4.085420e-01	ci left: 5.636326e-04	ci right 8.593764e-04	k: 91	n:130000
Cons ci ratio: 6.541982e-03	ci left: 7.317664e-01	ci right 7.365770e-01	k: 95443	n:130000
KS ci ratio: 4.085420e-01	ci left: 5.636326e-04	ci right 8.593764e-04	k: 91	n:130000
ZNF704   130000 perm   30 sec   (4329 perm/sec)   p_kst 7.000000e-04   p_cons 7.341769e-01   p_joint 7.000000e-04

Joint ci ratio: 3.861056e-01	ci left: 5.941008e-04	ci right 8.843671e-04	k: 102	n:140000
Cons ci ratio: 6.308601e-03	ci left: 7.315696e-01	ci right 7.362064e-01	k: 102745	n:140000
KS ci ratio: 3.861056e-01	ci left: 5.941008e-04	ci right 8.843671e-04	k: 102	n:140000
ZNF704   140000 perm   33 sec   (4267 perm/sec)   p_kst 7.285714e-04   p_cons 7.338929e-01   p_joint 7.285714e-04

Joint ci ratio: 3.719310e-01	ci left: 6.027482e-04	ci right 8.837984e-04	k: 110	n:150000
Cons ci ratio: 6.103939e-03	ci left: 7.310542e-01	ci right 7.355368e-01	k: 109995	n:150000
KS ci ratio: 3.719310e-01	ci left: 6.027482e-04	ci right 8.837984e-04	k: 110	n:150000
ZNF704   150000 perm   36 sec   (4207 perm/sec)   p_kst 7.333333e-04   p_cons 7.333000e-01   p_joint 7.333333e-04

Joint ci ratio: 3.654094e-01	ci left: 5.877595e-04	ci right 8.558688e-04	k: 114	n:160000
Cons ci ratio: 5.917764e-03	ci left: 7.306182e-01	ci right 7.349609e-01	k: 117247	n:160000
KS ci ratio: 3.654094e-01	ci left: 5.877595e-04	ci right 8.558688e-04	k: 114	n:160000
ZNF704   160000 perm   39 sec   (4147 perm/sec)   p_kst 7.125000e-04   p_cons 7.327938e-01   p_joint 7.125000e-04

Joint ci ratio: 3.577180e-01	ci left: 5.799251e-04	ci right 8.375967e-04	k: 119	n:170000
Cons ci ratio: 5.741242e-03	ci left: 7.306719e-01	ci right 7.348848e-01	k: 124573	n:170000
KS ci ratio: 3.577180e-01	ci left: 5.799251e-04	ci right 8.375967e-04	k: 119	n:170000
ZNF704   170000 perm   42 sec   (4082 perm/sec)   p_kst 7.000000e-04   p_cons 7.327824e-01   p_joint 7.000000e-04

Joint ci ratio: 3.477201e-01	ci left: 5.831512e-04	ci right 8.333836e-04	k: 126	n:180000
Cons ci ratio: 5.583508e-03	ci left: 7.304486e-01	ci right 7.345439e-01	k: 131850	n:180000
KS ci ratio: 3.477201e-01	ci left: 5.831512e-04	ci right 8.333836e-04	k: 126	n:180000
ZNF704   180000 perm   45 sec   (4000 perm/sec)   p_kst 7.000000e-04   p_cons 7.325000e-01   p_joint 7.000000e-04

Joint ci ratio: 3.410728e-01	ci left: 5.764985e-04	ci right 8.181051e-04	k: 131	n:190000
Cons ci ratio: 5.434880e-03	ci left: 7.304823e-01	ci right 7.344685e-01	k: 139171	n:190000
KS ci ratio: 3.410728e-01	ci left: 5.764985e-04	ci right 8.181051e-04	k: 131	n:190000
ZNF704   190000 perm   48 sec   (3938 perm/sec)   p_kst 6.894737e-04   p_cons 7.324789e-01   p_joint 6.894737e-04

Joint ci ratio: 3.323737e-01	ci left: 5.797151e-04	ci right 8.151476e-04	k: 138	n:200000
Cons ci ratio: 5.299144e-03	ci left: 7.303938e-01	ci right 7.342795e-01	k: 146468	n:200000
KS ci ratio: 3.323737e-01	ci left: 5.797151e-04	ci right 8.151476e-04	k: 138	n:200000
ZNF704   200000 perm   52 sec   (3878 perm/sec)   p_kst 6.900000e-04   p_cons 7.323400e-01   p_joint 6.900000e-04

Joint ci ratio: 3.254251e-01	ci left: 5.783222e-04	ci right 8.072534e-04	k: 144	n:210000
Cons ci ratio: 5.171335e-03	ci left: 7.304485e-01	ci right 7.342404e-01	k: 153793	n:210000
KS ci ratio: 3.254251e-01	ci left: 5.783222e-04	ci right 8.072534e-04	k: 144	n:210000
ZNF704   210000 perm   55 sec   (3820 perm/sec)   p_kst 6.857143e-04   p_cons 7.323476e-01   p_joint 6.857143e-04

Joint ci ratio: 3.178434e-01	ci left: 5.812848e-04	ci right 8.049379e-04	k: 151	n:220000
Cons ci ratio: 5.051529e-03	ci left: 7.305630e-01	ci right 7.342673e-01	k: 161132	n:220000
KS ci ratio: 3.178434e-01	ci left: 5.812848e-04	ci right 8.049379e-04	k: 151	n:220000
ZNF704   220000 perm   58 sec   (3765 perm/sec)   p_kst 6.863636e-04   p_cons 7.324182e-01   p_joint 6.863636e-04

Joint ci ratio: 3.107681e-01	ci left: 5.840463e-04	ci right 8.027679e-04	k: 158	n:230000
Cons ci ratio: 4.946477e-03	ci left: 7.301281e-01	ci right 7.337530e-01	k: 168347	n:230000
KS ci ratio: 3.107681e-01	ci left: 5.840463e-04	ci right 8.027679e-04	k: 158	n:230000
ZNF704   230000 perm   62 sec   (3715 perm/sec)   p_kst 6.869565e-04   p_cons 7.319435e-01   p_joint 6.869565e-04

Joint ci ratio: 3.023281e-01	ci left: 5.943278e-04	ci right 8.096936e-04	k: 167	n:240000
Cons ci ratio: 4.842968e-03	ci left: 7.301146e-01	ci right 7.336632e-01	k: 175654	n:240000
KS ci ratio: 3.023281e-01	ci left: 5.943278e-04	ci right 8.096936e-04	k: 167	n:240000
ZNF704   240000 perm   65 sec   (3667 perm/sec)   p_kst 6.958333e-04   p_cons 7.318917e-01   p_joint 6.958333e-04

Joint ci ratio: 2.970704e-01	ci left: 5.927503e-04	ci right 8.031051e-04	k: 173	n:250000
Cons ci ratio: 4.744827e-03	ci left: 7.301749e-01	ci right 7.336517e-01	k: 182979	n:250000
KS ci ratio: 2.970704e-01	ci left: 5.927503e-04	ci right 8.031051e-04	k: 173	n:250000
ZNF704   250000 perm   70 sec   (3596 perm/sec)   p_kst 6.920000e-04   p_cons 7.319160e-01   p_joint 6.920000e-04

Joint ci ratio: 2.904675e-01	ci left: 5.984547e-04	ci right 8.052461e-04	k: 181	n:260000
Cons ci ratio: 4.653422e-03	ci left: 7.301466e-01	ci right 7.335560e-01	k: 190282	n:260000
KS ci ratio: 2.904675e-01	ci left: 5.984547e-04	ci right 8.052461e-04	k: 181	n:260000
ZNF704   260000 perm   73 sec   (3550 perm/sec)   p_kst 6.961538e-04   p_cons 7.318538e-01   p_joint 6.961538e-04

Joint ci ratio: 2.873288e-01	ci left: 5.900308e-04	ci right 7.913081e-04	k: 185	n:270000
Cons ci ratio: 4.569475e-03	ci left: 7.299168e-01	ci right 7.332634e-01	k: 197530	n:270000
KS ci ratio: 2.873288e-01	ci left: 5.900308e-04	ci right 7.913081e-04	k: 185	n:270000
ZNF704   270000 perm   77 sec   (3503 perm/sec)   p_kst 6.851852e-04   p_cons 7.315926e-01   p_joint 6.851852e-04

Joint ci ratio: 2.828041e-01	ci left: 5.888549e-04	ci right 7.860037e-04	k: 191	n:280000
Cons ci ratio: 4.487295e-03	ci left: 7.299330e-01	ci right 7.332193e-01	k: 204842	n:280000
KS ci ratio: 2.828041e-01	ci left: 5.888549e-04	ci right 7.860037e-04	k: 191	n:280000
ZNF704   280000 perm   81 sec   (3462 perm/sec)   p_kst 6.821429e-04   p_cons 7.315786e-01   p_joint 6.821429e-04

Joint ci ratio: 2.750333e-01	ci left: 6.038290e-04	ci right 7.994759e-04	k: 202	n:290000
Cons ci ratio: 4.405873e-03	ci left: 7.302630e-01	ci right 7.334910e-01	k: 212245	n:290000
KS ci ratio: 2.750333e-01	ci left: 6.038290e-04	ci right 7.994759e-04	k: 202	n:290000
ZNF704   290000 perm   85 sec   (3420 perm/sec)   p_kst 6.965517e-04   p_cons 7.318793e-01   p_joint 6.965517e-04

Joint ci ratio: 2.672455e-01	ci left: 6.209836e-04	ci right 8.155377e-04	k: 214	n:300000
Cons ci ratio: 4.333100e-03	ci left: 7.301741e-01	ci right 7.333481e-01	k: 219529	n:300000
KS ci ratio: 2.672455e-01	ci left: 6.209836e-04	ci right 8.155377e-04	k: 214	n:300000
ZNF704   300000 perm   89 sec   (3379 perm/sec)   p_kst 7.133333e-04   p_cons 7.317633e-01   p_joint 7.133333e-04

Joint ci ratio: 2.660134e-01	ci left: 6.069716e-04	ci right 7.961128e-04	k: 216	n:310000
Cons ci ratio: 4.263887e-03	ci left: 7.300848e-01	ci right 7.332076e-01	k: 226811	n:310000
KS ci ratio: 2.660134e-01	ci left: 6.069716e-04	ci right 7.961128e-04	k: 216	n:310000
ZNF704   310000 perm   93 sec   (3339 perm/sec)   p_kst 6.967742e-04   p_cons 7.316484e-01   p_joint 6.967742e-04

Joint ci ratio: 2.624107e-01	ci left: 6.055119e-04	ci right 7.912234e-04	k: 222	n:320000
Cons ci ratio: 4.196117e-03	ci left: 7.301675e-01	ci right 7.332408e-01	k: 234146	n:320000
KS ci ratio: 2.624107e-01	ci left: 6.055119e-04	ci right 7.912234e-04	k: 222	n:320000
ZNF704   320000 perm   97 sec   (3301 perm/sec)   p_kst 6.937500e-04   p_cons 7.317063e-01   p_joint 6.937500e-04

Joint ci ratio: 2.583867e-01	ci left: 6.069908e-04	ci right 7.898404e-04	k: 229	n:330000
Cons ci ratio: 4.132243e-03	ci left: 7.301726e-01	ci right 7.331991e-01	k: 241457	n:330000
KS ci ratio: 2.583867e-01	ci left: 6.069908e-04	ci right 7.898404e-04	k: 229	n:330000
ZNF704   330000 perm   101 sec   (3262 perm/sec)   p_kst 6.939394e-04   p_cons 7.316879e-01   p_joint 6.939394e-04

Joint ci ratio: 2.550813e-01	ci left: 6.056497e-04	ci right 7.853901e-04	k: 235	n:340000
Cons ci ratio: 4.071994e-03	ci left: 7.301012e-01	ci right 7.330831e-01	k: 248742	n:340000
KS ci ratio: 2.550813e-01	ci left: 6.056497e-04	ci right 7.853901e-04	k: 235	n:340000
ZNF704   340000 perm   105 sec   (3223 perm/sec)   p_kst 6.911765e-04   p_cons 7.315941e-01   p_joint 6.911765e-04

Joint ci ratio: 2.513804e-01	ci left: 6.070763e-04	ci right 7.842169e-04	k: 242	n:350000
Cons ci ratio: 4.013312e-03	ci left: 7.301315e-01	ci right 7.330704e-01	k: 256061	n:350000
KS ci ratio: 2.513804e-01	ci left: 6.070763e-04	ci right 7.842169e-04	k: 242	n:350000
ZNF704   350000 perm   110 sec   (3186 perm/sec)   p_kst 6.914286e-04   p_cons 7.316029e-01   p_joint 6.914286e-04

Joint ci ratio: 2.463613e-01	ci left: 6.162590e-04	ci right 7.919392e-04	k: 252	n:360000
Cons ci ratio: 3.957096e-03	ci left: 7.301604e-01	ci right 7.330581e-01	k: 263380	n:360000
KS ci ratio: 2.463613e-01	ci left: 6.162590e-04	ci right 7.919392e-04	k: 252	n:360000
ZNF704   360000 perm   114 sec   (3150 perm/sec)   p_kst 7.000000e-04   p_cons 7.316111e-01   p_joint 7.000000e-04

Joint ci ratio: 2.407171e-01	ci left: 6.300574e-04	ci right 8.049422e-04	k: 264	n:370000
Cons ci ratio: 3.901861e-03	ci left: 7.303206e-01	ci right 7.331785e-01	k: 270748	n:370000
KS ci ratio: 2.407171e-01	ci left: 6.300574e-04	ci right 8.049422e-04	k: 264	n:370000
ZNF704   370000 perm   119 sec   (3114 perm/sec)   p_kst 7.135135e-04   p_cons 7.317514e-01   p_joint 7.135135e-04

Joint ci ratio: 2.380378e-01	ci left: 6.283194e-04	ci right 8.004943e-04	k: 270	n:380000
Cons ci ratio: 3.849211e-03	ci left: 7.304384e-01	ci right 7.332580e-01	k: 278103	n:380000
KS ci ratio: 2.380378e-01	ci left: 6.283194e-04	ci right 8.004943e-04	k: 270	n:380000
ZNF704   380000 perm   123 sec   (3079 perm/sec)   p_kst 7.105263e-04   p_cons 7.318500e-01   p_joint 7.105263e-04

Joint ci ratio: 2.358725e-01	ci left: 6.242679e-04	ci right 7.935493e-04	k: 275	n:390000
Cons ci ratio: 3.799480e-03	ci left: 7.304631e-01	ci right 7.332463e-01	k: 285424	n:390000
KS ci ratio: 2.358725e-01	ci left: 6.242679e-04	ci right 7.935493e-04	k: 275	n:390000
ZNF704   390000 perm   128 sec   (3046 perm/sec)   p_kst 7.051282e-04   p_cons 7.318564e-01   p_joint 7.051282e-04

Joint ci ratio: 2.333500e-01	ci left: 6.227795e-04	ci right 7.895908e-04	k: 281	n:400000
Cons ci ratio: 3.754137e-03	ci left: 7.302238e-01	ci right 7.329728e-01	k: 292640	n:400000
KS ci ratio: 2.333500e-01	ci left: 6.227795e-04	ci right 7.895908e-04	k: 281	n:400000
ZNF704   400000 perm   133 sec   (3012 perm/sec)   p_kst 7.025000e-04   p_cons 7.316000e-01   p_joint 7.025000e-04

Joint ci ratio: 2.277628e-01	ci left: 6.397648e-04	ci right 8.064465e-04	k: 295	n:410000
Cons ci ratio: 3.708303e-03	ci left: 7.302163e-01	ci right 7.329316e-01	k: 299946	n:410000
KS ci ratio: 2.277628e-01	ci left: 6.397648e-04	ci right 8.064465e-04	k: 295	n:410000
ZNF704   410000 perm   138 sec   (2979 perm/sec)   p_kst 7.195122e-04   p_cons 7.315756e-01   p_joint 7.195122e-04

Joint ci ratio: 2.254893e-01	ci left: 6.380070e-04	ci right 8.023408e-04	k: 301	n:420000
Cons ci ratio: 3.664485e-03	ci left: 7.301688e-01	ci right 7.328518e-01	k: 307235	n:420000
KS ci ratio: 2.254893e-01	ci left: 6.380070e-04	ci right 8.023408e-04	k: 301	n:420000
ZNF704   420000 perm   144 sec   (2923 perm/sec)   p_kst 7.166667e-04   p_cons 7.315119e-01   p_joint 7.166667e-04

Joint ci ratio: 2.218455e-01	ci left: 6.451229e-04	ci right 8.082379e-04	k: 311	n:430000
Cons ci ratio: 3.622441e-03	ci left: 7.300958e-01	ci right 7.327476e-01	k: 314512	n:430000
KS ci ratio: 2.218455e-01	ci left: 6.451229e-04	ci right 8.082379e-04	k: 311	n:430000
ZNF704   430000 perm   149 sec   (2891 perm/sec)   p_kst 7.232558e-04   p_cons 7.314233e-01   p_joint 7.232558e-04

Joint ci ratio: 2.173619e-01	ci left: 6.583821e-04	ci right 8.210360e-04	k: 324	n:440000
Cons ci ratio: 3.582268e-03	ci left: 7.299762e-01	ci right 7.325981e-01	k: 321767	n:440000
KS ci ratio: 2.173619e-01	ci left: 6.583821e-04	ci right 8.210360e-04	k: 324	n:440000
ZNF704   440000 perm   154 sec   (2857 perm/sec)   p_kst 7.363636e-04   p_cons 7.312886e-01   p_joint 7.363636e-04

Joint ci ratio: 2.163667e-01	ci left: 6.500556e-04	ci right 8.098195e-04	k: 327	n:450000
Cons ci ratio: 3.541197e-03	ci left: 7.301068e-01	ci right 7.326991e-01	k: 329132	n:450000
KS ci ratio: 2.163667e-01	ci left: 6.500556e-04	ci right 8.098195e-04	k: 327	n:450000
ZNF704   450000 perm   159 sec   (2826 perm/sec)   p_kst 7.266667e-04   p_cons 7.314044e-01   p_joint 7.266667e-04

Joint ci ratio: 2.134575e-01	ci left: 6.544363e-04	ci right 8.128312e-04	k: 336	n:460000
Cons ci ratio: 3.504201e-03	ci left: 7.299294e-01	ci right 7.324938e-01	k: 336358	n:460000
KS ci ratio: 2.134575e-01	ci left: 6.544363e-04	ci right 8.128312e-04	k: 336	n:460000
ZNF704   460000 perm   165 sec   (2793 perm/sec)   p_kst 7.304348e-04   p_cons 7.312130e-01   p_joint 7.304348e-04

Joint ci ratio: 2.125147e-01	ci left: 6.465544e-04	ci right 8.022602e-04	k: 339	n:470000
Cons ci ratio: 3.466236e-03	ci left: 7.299982e-01	ci right 7.325351e-01	k: 343696	n:470000
KS ci ratio: 2.125147e-01	ci left: 6.465544e-04	ci right 8.022602e-04	k: 339	n:470000
ZNF704   470000 perm   171 sec   (2744 perm/sec)   p_kst 7.212766e-04   p_cons 7.312681e-01   p_joint 7.212766e-04

Joint ci ratio: 2.091574e-01	ci left: 6.547915e-04	ci right 8.096709e-04	k: 350	n:480000
Cons ci ratio: 3.428716e-03	ci left: 7.301520e-01	ci right 7.326618e-01	k: 351076	n:480000
KS ci ratio: 2.091574e-01	ci left: 6.547915e-04	ci right 8.096709e-04	k: 350	n:480000
ZNF704   480000 perm   177 sec   (2718 perm/sec)   p_kst 7.291667e-04   p_cons 7.314083e-01   p_joint 7.291667e-04

Joint ci ratio: 2.068137e-01	ci left: 6.569047e-04	ci right 8.103226e-04	k: 358	n:490000
Cons ci ratio: 3.391170e-03	ci left: 7.304407e-01	ci right 7.329239e-01	k: 358525	n:490000
KS ci ratio: 2.068137e-01	ci left: 6.569047e-04	ci right 8.103226e-04	k: 358	n:490000
ZNF704   490000 perm   182 sec   (2691 perm/sec)   p_kst 7.306122e-04   p_cons 7.316837e-01   p_joint 7.306122e-04

Joint ci ratio: 2.042687e-01	ci left: 6.608404e-04	ci right 8.130411e-04	k: 367	n:500000
Cons ci ratio: 3.356537e-03	ci left: 7.305176e-01	ci right 7.329757e-01	k: 365874	n:500000
KS ci ratio: 2.042687e-01	ci left: 6.608404e-04	ci right 8.130411e-04	k: 367	n:500000
ZNF704   500000 perm   188 sec   (2658 perm/sec)   p_kst 7.340000e-04   p_cons 7.317480e-01   p_joint 7.340000e-04

Joint ci ratio: 2.026238e-01	ci left: 6.590481e-04	ci right 8.094625e-04	k: 373	n:510000
Cons ci ratio: 3.323841e-03	ci left: 7.304856e-01	ci right 7.329196e-01	k: 373169	n:510000
KS ci ratio: 2.026238e-01	ci left: 6.590481e-04	ci right 8.094625e-04	k: 373	n:510000
ZNF704   510000 perm   194 sec   (2632 perm/sec)   p_kst 7.313725e-04   p_cons 7.317039e-01   p_joint 7.313725e-04

Joint ci ratio: 1.999676e-01	ci left: 6.646358e-04	ci right 8.140944e-04	k: 383	n:520000
Cons ci ratio: 3.292113e-03	ci left: 7.304511e-01	ci right 7.328617e-01	k: 380462	n:520000
KS ci ratio: 1.999676e-01	ci left: 6.646358e-04	ci right 8.140944e-04	k: 383	n:520000
ZNF704   520000 perm   199 sec   (2607 perm/sec)   p_kst 7.365385e-04   p_cons 7.316577e-01   p_joint 7.365385e-04

Joint ci ratio: 1.971629e-01	ci left: 6.718186e-04	ci right 8.205190e-04	k: 394	n:530000
Cons ci ratio: 3.260556e-03	ci left: 7.305049e-01	ci right 7.328925e-01	k: 387801	n:530000
KS ci ratio: 1.971629e-01	ci left: 6.718186e-04	ci right 8.205190e-04	k: 394	n:530000
ZNF704   530000 perm   205 sec   (2583 perm/sec)   p_kst 7.433962e-04   p_cons 7.317000e-01   p_joint 7.433962e-04

Joint ci ratio: 1.949541e-01	ci left: 6.752262e-04	ci right 8.228078e-04	k: 403	n:540000
Cons ci ratio: 3.230240e-03	ci left: 7.305142e-01	ci right 7.328796e-01	k: 395117	n:540000
KS ci ratio: 1.949541e-01	ci left: 6.752262e-04	ci right 8.228078e-04	k: 403	n:540000
ZNF704   540000 perm   211 sec   (2559 perm/sec)   p_kst 7.462963e-04   p_cons 7.316981e-01   p_joint 7.462963e-04

Joint ci ratio: 1.935227e-01	ci left: 6.733279e-04	ci right 8.192867e-04	k: 409	n:550000
Cons ci ratio: 3.201080e-03	ci left: 7.304832e-01	ci right 7.328271e-01	k: 402411	n:550000
KS ci ratio: 1.935227e-01	ci left: 6.733279e-04	ci right 8.192867e-04	k: 409	n:550000
ZNF704   550000 perm   217 sec   (2535 perm/sec)   p_kst 7.436364e-04   p_cons 7.316564e-01   p_joint 7.436364e-04

Joint ci ratio: 1.925861e-01	ci left: 6.681017e-04	ci right 8.121445e-04	k: 413	n:560000
Cons ci ratio: 3.171845e-03	ci left: 7.305589e-01	ci right 7.328816e-01	k: 409764	n:560000
KS ci ratio: 1.925861e-01	ci left: 6.681017e-04	ci right 8.121445e-04	k: 413	n:560000
ZNF704   560000 perm   223 sec   (2511 perm/sec)   p_kst 7.375000e-04   p_cons 7.317214e-01   p_joint 7.375000e-04

Joint ci ratio: 1.912058e-01	ci left: 6.664011e-04	ci right 8.089279e-04	k: 419	n:570000
Cons ci ratio: 3.143944e-03	ci left: 7.305635e-01	ci right 7.328657e-01	k: 417078	n:570000
KS ci ratio: 1.912058e-01	ci left: 6.664011e-04	ci right 8.089279e-04	k: 419	n:570000
ZNF704   570000 perm   229 sec   (2487 perm/sec)   p_kst 7.350877e-04   p_cons 7.317158e-01   p_joint 7.350877e-04

Joint ci ratio: 1.896321e-01	ci left: 6.664051e-04	ci right 8.076245e-04	k: 426	n:580000
Cons ci ratio: 3.115931e-03	ci left: 7.306734e-01	ci right 7.329553e-01	k: 424453	n:580000
KS ci ratio: 1.896321e-01	ci left: 6.664051e-04	ci right 8.076245e-04	k: 426	n:580000
ZNF704   580000 perm   236 sec   (2461 perm/sec)   p_kst 7.344828e-04   p_cons 7.318155e-01   p_joint 7.344828e-04

Joint ci ratio: 1.876644e-01	ci left: 6.696440e-04	ci right 8.099096e-04	k: 435	n:590000
Cons ci ratio: 3.089828e-03	ci left: 7.306302e-01	ci right 7.328929e-01	k: 431740	n:590000
KS ci ratio: 1.876644e-01	ci left: 6.696440e-04	ci right 8.099096e-04	k: 435	n:590000
ZNF704   590000 perm   242 sec   (2440 perm/sec)   p_kst 7.372881e-04   p_cons 7.317627e-01   p_joint 7.372881e-04

Joint ci ratio: 1.865979e-01	ci left: 6.664262e-04	ci right 8.051345e-04	k: 440	n:600000
Cons ci ratio: 3.064239e-03	ci left: 7.306053e-01	ci right 7.328491e-01	k: 439037	n:600000
KS ci ratio: 1.865979e-01	ci left: 6.664262e-04	ci right 8.051345e-04	k: 440	n:600000
ZNF704   600000 perm   249 sec   (2413 perm/sec)   p_kst 7.333333e-04   p_cons 7.317283e-01   p_joint 7.333333e-04

Joint ci ratio: 1.851344e-01	ci left: 6.664426e-04	ci right 8.039443e-04	k: 447	n:610000
Cons ci ratio: 3.038591e-03	ci left: 7.306699e-01	ci right 7.328951e-01	k: 446388	n:610000
KS ci ratio: 1.851344e-01	ci left: 6.664426e-04	ci right 8.039443e-04	k: 447	n:610000
ZNF704   610000 perm   255 sec   (2392 perm/sec)   p_kst 7.327869e-04   p_cons 7.317836e-01   p_joint 7.327869e-04

Joint ci ratio: 1.827030e-01	ci left: 6.741576e-04	ci right 8.112221e-04	k: 459	n:620000
Cons ci ratio: 3.013576e-03	ci left: 7.307325e-01	ci right 7.329395e-01	k: 453739	n:620000
KS ci ratio: 1.827030e-01	ci left: 6.741576e-04	ci right 8.112221e-04	k: 459	n:620000
ZNF704   620000 perm   261 sec   (2371 perm/sec)   p_kst 7.403226e-04   p_cons 7.318371e-01   p_joint 7.403226e-04

Joint ci ratio: 1.819143e-01	ci left: 6.695160e-04	ci right 8.049844e-04	k: 463	n:630000
Cons ci ratio: 2.988963e-03	ci left: 7.308202e-01	ci right 7.330094e-01	k: 461107	n:630000
KS ci ratio: 1.819143e-01	ci left: 6.695160e-04	ci right 8.049844e-04	k: 463	n:630000
ZNF704   630000 perm   268 sec   (2351 perm/sec)   p_kst 7.349206e-04   p_cons 7.319159e-01   p_joint 7.349206e-04

Joint ci ratio: 1.801750e-01	ci left: 6.724801e-04	ci right 8.071055e-04	k: 472	n:640000
Cons ci ratio: 2.964424e-03	ci left: 7.309741e-01	ci right 7.331457e-01	k: 468519	n:640000
KS ci ratio: 1.801750e-01	ci left: 6.724801e-04	ci right 8.071055e-04	k: 472	n:640000
ZNF704   640000 perm   275 sec   (2331 perm/sec)   p_kst 7.375000e-04   p_cons 7.320609e-01   p_joint 7.375000e-04

Joint ci ratio: 1.792306e-01	ci left: 6.694805e-04	ci right 8.027266e-04	k: 477	n:650000
Cons ci ratio: 2.941597e-03	ci left: 7.309738e-01	ci right 7.331287e-01	k: 475834	n:650000
KS ci ratio: 1.792306e-01	ci left: 6.694805e-04	ci right 8.027266e-04	k: 477	n:650000
ZNF704   650000 perm   281 sec   (2311 perm/sec)   p_kst 7.338462e-04   p_cons 7.320523e-01   p_joint 7.338462e-04

Joint ci ratio: 1.781163e-01	ci left: 6.680211e-04	ci right 8.000612e-04	k: 483	n:660000
Cons ci ratio: 2.919221e-03	ci left: 7.309828e-01	ci right 7.331213e-01	k: 483155	n:660000
KS ci ratio: 1.781163e-01	ci left: 6.680211e-04	ci right 8.000612e-04	k: 483	n:660000
ZNF704   660000 perm   288 sec   (2291 perm/sec)   p_kst 7.318182e-04   p_cons 7.320530e-01   p_joint 7.318182e-04

Joint ci ratio: 1.763040e-01	ci left: 6.723141e-04	ci right 8.037065e-04	k: 493	n:670000
Cons ci ratio: 2.897107e-03	ci left: 7.310244e-01	ci right 7.331468e-01	k: 490498	n:670000
KS ci ratio: 1.763040e-01	ci left: 6.723141e-04	ci right 8.037065e-04	k: 493	n:670000
ZNF704   670000 perm   295 sec   (2271 perm/sec)   p_kst 7.358209e-04   p_cons 7.320866e-01   p_joint 7.358209e-04

Joint ci ratio: 1.755949e-01	ci left: 6.680503e-04	ci right 7.980286e-04	k: 497	n:680000
Cons ci ratio: 2.875293e-03	ci left: 7.310913e-01	ci right 7.331979e-01	k: 497859	n:680000
KS ci ratio: 1.755949e-01	ci left: 6.680503e-04	ci right 7.980286e-04	k: 497	n:680000
ZNF704   680000 perm   302 sec   (2253 perm/sec)   p_kst 7.308824e-04   p_cons 7.321456e-01   p_joint 7.308824e-04

Joint ci ratio: 1.743737e-01	ci left: 6.680690e-04	ci right 7.970518e-04	k: 504	n:690000
Cons ci ratio: 2.854492e-03	ci left: 7.310838e-01	ci right 7.331751e-01	k: 505170	n:690000
KS ci ratio: 1.743737e-01	ci left: 6.680690e-04	ci right 7.970518e-04	k: 504	n:690000
ZNF704   690000 perm   309 sec   (2234 perm/sec)   p_kst 7.304348e-04   p_cons 7.321304e-01   p_joint 7.304348e-04

Joint ci ratio: 1.728402e-01	ci left: 6.708238e-04	ci right 7.990805e-04	k: 513	n:700000
Cons ci ratio: 2.833846e-03	ci left: 7.311167e-01	ci right 7.331929e-01	k: 512509	n:700000
KS ci ratio: 1.728402e-01	ci left: 6.708238e-04	ci right 7.990805e-04	k: 513	n:700000
ZNF704   700000 perm   316 sec   (2217 perm/sec)   p_kst 7.328571e-04   p_cons 7.321557e-01   p_joint 7.328571e-04

Joint ci ratio: 1.718403e-01	ci left: 6.694617e-04	ci right 7.966408e-04	k: 519	n:710000
Cons ci ratio: 2.814633e-03	ci left: 7.310104e-01	ci right 7.330722e-01	k: 519750	n:710000
KS ci ratio: 1.718403e-01	ci left: 6.694617e-04	ci right 7.966408e-04	k: 519	n:710000
ZNF704   710000 perm   323 sec   (2198 perm/sec)   p_kst 7.309859e-04   p_cons 7.320423e-01   p_joint 7.309859e-04

Joint ci ratio: 1.705334e-01	ci left: 6.707987e-04	ci right 7.971630e-04	k: 527	n:720000
Cons ci ratio: 2.795112e-03	ci left: 7.310045e-01	ci right 7.330520e-01	k: 527061	n:720000
KS ci ratio: 1.705334e-01	ci left: 6.707987e-04	ci right 7.971630e-04	k: 527	n:720000
ZNF704   720000 perm   330 sec   (2180 perm/sec)   p_kst 7.319444e-04   p_cons 7.320292e-01   p_joint 7.319444e-04

Joint ci ratio: 1.695728e-01	ci left: 6.694790e-04	ci right 7.948117e-04	k: 533	n:730000
Cons ci ratio: 2.776195e-03	ci left: 7.309700e-01	ci right 7.330035e-01	k: 534351	n:730000
KS ci ratio: 1.695728e-01	ci left: 6.694790e-04	ci right 7.948117e-04	k: 533	n:730000
ZNF704   730000 perm   338 sec   (2163 perm/sec)   p_kst 7.301370e-04   p_cons 7.319877e-01   p_joint 7.301370e-04

Joint ci ratio: 1.684722e-01	ci left: 6.694913e-04	ci right 7.939302e-04	k: 540	n:740000
Cons ci ratio: 2.756964e-03	ci left: 7.310353e-01	ci right 7.330548e-01	k: 541714	n:740000
KS ci ratio: 1.684722e-01	ci left: 6.694913e-04	ci right 7.939302e-04	k: 540	n:740000
ZNF704   740000 perm   345 sec   (2145 perm/sec)   p_kst 7.297297e-04   p_cons 7.320459e-01   p_joint 7.297297e-04

Joint ci ratio: 1.672402e-01	ci left: 6.707834e-04	ci right 7.944588e-04	k: 548	n:750000
Cons ci ratio: 2.738740e-03	ci left: 7.310107e-01	ci right 7.330168e-01	k: 549011	n:750000
KS ci ratio: 1.672402e-01	ci left: 6.707834e-04	ci right 7.944588e-04	k: 548	n:750000
ZNF704   750000 perm   352 sec   (2128 perm/sec)   p_kst 7.306667e-04   p_cons 7.320147e-01   p_joint 7.306667e-04

Joint ci ratio: 1.663339e-01	ci left: 6.695224e-04	ci right 7.922294e-04	k: 554	n:760000
Cons ci ratio: 2.720801e-03	ci left: 7.309974e-01	ci right 7.329903e-01	k: 556316	n:760000
KS ci ratio: 1.663339e-01	ci left: 6.695224e-04	ci right 7.922294e-04	k: 554	n:760000
ZNF704   760000 perm   360 sec   (2111 perm/sec)   p_kst 7.289474e-04   p_cons 7.319947e-01   p_joint 7.289474e-04

Joint ci ratio: 1.654421e-01	ci left: 6.682960e-04	ci right 7.900562e-04	k: 560	n:770000
Cons ci ratio: 2.703460e-03	ci left: 7.309481e-01	ci right 7.329281e-01	k: 563593	n:770000
KS ci ratio: 1.654421e-01	ci left: 6.682960e-04	ci right 7.900562e-04	k: 560	n:770000
ZNF704   770000 perm   368 sec   (2094 perm/sec)   p_kst 7.272727e-04   p_cons 7.319390e-01   p_joint 7.272727e-04

Joint ci ratio: 1.639867e-01	ci left: 6.720203e-04	ci right 7.932757e-04	k: 570	n:780000
Cons ci ratio: 2.686832e-03	ci left: 7.308436e-01	ci right 7.328111e-01	k: 570826	n:780000
KS ci ratio: 1.639867e-01	ci left: 6.720203e-04	ci right 7.932757e-04	k: 570	n:780000
ZNF704   780000 perm   375 sec   (2079 perm/sec)   p_kst 7.307692e-04   p_cons 7.318282e-01   p_joint 7.307692e-04

Joint ci ratio: 1.625691e-01	ci left: 6.756548e-04	ci right 7.964091e-04	k: 580	n:790000
Cons ci ratio: 2.669784e-03	ci left: 7.308482e-01	ci right 7.328033e-01	k: 578143	n:790000
KS ci ratio: 1.625691e-01	ci left: 6.756548e-04	ci right 7.964091e-04	k: 580	n:790000
ZNF704   790000 perm   383 sec   (2063 perm/sec)   p_kst 7.341772e-04   p_cons 7.318266e-01   p_joint 7.341772e-04

Joint ci ratio: 1.613242e-01	ci left: 6.780032e-04	ci right 7.981594e-04	k: 589	n:800000
Cons ci ratio: 2.652498e-03	ci left: 7.309354e-01	ci right 7.328780e-01	k: 585526	n:800000
KS ci ratio: 1.613242e-01	ci left: 6.780032e-04	ci right 7.981594e-04	k: 589	n:800000
ZNF704   800000 perm   391 sec   (2048 perm/sec)   p_kst 7.362500e-04   p_cons 7.319075e-01   p_joint 7.362500e-04

Joint ci ratio: 1.603757e-01	ci left: 6.779269e-04	ci right 7.972952e-04	k: 596	n:810000
Cons ci ratio: 2.635577e-03	ci left: 7.310155e-01	ci right 7.329458e-01	k: 592905	n:810000
KS ci ratio: 1.603757e-01	ci left: 6.779269e-04	ci right 7.972952e-04	k: 596	n:810000
ZNF704   810000 perm   399 sec   (2031 perm/sec)   p_kst 7.358025e-04   p_cons 7.319815e-01   p_joint 7.358025e-04

Joint ci ratio: 1.594437e-01	ci left: 6.778545e-04	ci right 7.964500e-04	k: 603	n:820000
Cons ci ratio: 2.618357e-03	ci left: 7.311864e-01	ci right 7.331046e-01	k: 600360	n:820000
KS ci ratio: 1.594437e-01	ci left: 6.778545e-04	ci right 7.964500e-04	k: 603	n:820000
ZNF704   820000 perm   407 sec   (2016 perm/sec)   p_kst 7.353659e-04   p_cons 7.321463e-01   p_joint 7.353659e-04

Joint ci ratio: 1.581397e-01	ci left: 6.812571e-04	ci right 7.993806e-04	k: 613	n:830000
Cons ci ratio: 2.602819e-03	ci left: 7.311495e-01	ci right 7.330562e-01	k: 607646	n:830000
KS ci ratio: 1.581397e-01	ci left: 6.812571e-04	ci right 7.993806e-04	k: 613	n:830000
ZNF704   830000 perm   415 sec   (2001 perm/sec)   p_kst 7.385542e-04   p_cons 7.321036e-01   p_joint 7.385542e-04

Joint ci ratio: 1.574999e-01	ci left: 6.788642e-04	ci right 7.960515e-04	k: 618	n:840000
Cons ci ratio: 2.587005e-03	ci left: 7.311968e-01	ci right 7.330920e-01	k: 615002	n:840000
KS ci ratio: 1.574999e-01	ci left: 6.788642e-04	ci right 7.960515e-04	k: 618	n:840000
ZNF704   840000 perm   423 sec   (1987 perm/sec)   p_kst 7.357143e-04   p_cons 7.321452e-01   p_joint 7.357143e-04

Joint ci ratio: 1.564919e-01	ci left: 6.799196e-04	ci right 7.964674e-04	k: 626	n:850000
Cons ci ratio: 2.571453e-03	ci left: 7.312467e-01	ci right 7.331306e-01	k: 622361	n:850000
KS ci ratio: 1.564919e-01	ci left: 6.799196e-04	ci right 7.964674e-04	k: 626	n:850000
ZNF704   850000 perm   431 sec   (1972 perm/sec)   p_kst 7.364706e-04   p_cons 7.321894e-01   p_joint 7.364706e-04

Joint ci ratio: 1.557486e-01	ci left: 6.787177e-04	ci right 7.944553e-04	k: 632	n:860000
Cons ci ratio: 2.557072e-03	ci left: 7.311580e-01	ci right 7.330311e-01	k: 629602	n:860000
KS ci ratio: 1.557486e-01	ci left: 6.787177e-04	ci right 7.944553e-04	k: 632	n:860000
ZNF704   860000 perm   439 sec   (1958 perm/sec)   p_kst 7.348837e-04   p_cons 7.320953e-01   p_joint 7.348837e-04

Joint ci ratio: 1.548945e-01	ci left: 6.786496e-04	ci right 7.936821e-04	k: 639	n:870000
Cons ci ratio: 2.542550e-03	ci left: 7.311301e-01	ci right 7.329925e-01	k: 636894	n:870000
KS ci ratio: 1.548945e-01	ci left: 6.786496e-04	ci right 7.936821e-04	k: 639	n:870000
ZNF704   870000 perm   448 sec   (1944 perm/sec)   p_kst 7.344828e-04   p_cons 7.320621e-01   p_joint 7.344828e-04

Joint ci ratio: 1.535800e-01	ci left: 6.829554e-04	ci right 7.976449e-04	k: 650	n:880000
Cons ci ratio: 2.528367e-03	ci left: 7.310881e-01	ci right 7.329400e-01	k: 644173	n:880000
KS ci ratio: 1.535800e-01	ci left: 6.829554e-04	ci right 7.976449e-04	k: 650	n:880000
ZNF704   880000 perm   456 sec   (1930 perm/sec)   p_kst 7.386364e-04   p_cons 7.320148e-01   p_joint 7.386364e-04

Joint ci ratio: 1.531106e-01	ci left: 6.796035e-04	ci right 7.933494e-04	k: 654	n:890000
Cons ci ratio: 2.514231e-03	ci left: 7.310762e-01	ci right 7.329177e-01	k: 651478	n:890000
KS ci ratio: 1.531106e-01	ci left: 6.796035e-04	ci right 7.933494e-04	k: 654	n:890000
ZNF704   890000 perm   465 sec   (1915 perm/sec)   p_kst 7.348315e-04   p_cons 7.319978e-01   p_joint 7.348315e-04

Joint ci ratio: 1.525298e-01	ci left: 6.773954e-04	ci right 7.903023e-04	k: 659	n:900000
Cons ci ratio: 2.500649e-03	ci left: 7.310147e-01	ci right 7.328461e-01	k: 658738	n:900000
KS ci ratio: 1.525298e-01	ci left: 6.773954e-04	ci right 7.903023e-04	k: 659	n:900000
ZNF704   900000 perm   473 sec   (1902 perm/sec)   p_kst 7.322222e-04   p_cons 7.319311e-01   p_joint 7.322222e-04

Joint ci ratio: 1.515002e-01	ci left: 6.794655e-04	ci right 7.918836e-04	k: 668	n:910000
Cons ci ratio: 2.487472e-03	ci left: 7.309248e-01	ci right 7.327463e-01	k: 665971	n:910000
KS ci ratio: 1.515002e-01	ci left: 6.794655e-04	ci right 7.918836e-04	k: 668	n:910000
ZNF704   910000 perm   482 sec   (1889 perm/sec)   p_kst 7.340659e-04   p_cons 7.318363e-01   p_joint 7.340659e-04

Joint ci ratio: 1.504911e-01	ci left: 6.814931e-04	ci right 7.934281e-04	k: 677	n:920000
Cons ci ratio: 2.473981e-03	ci left: 7.309196e-01	ci right 7.327311e-01	k: 673280	n:920000
KS ci ratio: 1.504911e-01	ci left: 6.814931e-04	ci right 7.934281e-04	k: 677	n:920000
ZNF704   920000 perm   491 sec   (1875 perm/sec)   p_kst 7.358696e-04   p_cons 7.318261e-01   p_joint 7.358696e-04

Joint ci ratio: 1.497203e-01	ci left: 6.814094e-04	ci right 7.927060e-04	k: 684	n:930000
Cons ci ratio: 2.460632e-03	ci left: 7.309263e-01	ci right 7.327281e-01	k: 680600	n:930000
KS ci ratio: 1.497203e-01	ci left: 6.814094e-04	ci right 7.927060e-04	k: 684	n:930000
ZNF704   930000 perm   500 sec   (1860 perm/sec)   p_kst 7.354839e-04   p_cons 7.318280e-01   p_joint 7.354839e-04

Joint ci ratio: 1.490689e-01	ci left: 6.803047e-04	ci right 7.908944e-04	k: 690	n:940000
Cons ci ratio: 2.447292e-03	ci left: 7.309660e-01	ci right 7.327581e-01	k: 687951	n:940000
KS ci ratio: 1.490689e-01	ci left: 6.803047e-04	ci right 7.908944e-04	k: 690	n:940000
ZNF704   940000 perm   509 sec   (1845 perm/sec)   p_kst 7.340426e-04   p_cons 7.318628e-01   p_joint 7.340426e-04

Joint ci ratio: 1.483196e-01	ci left: 6.802379e-04	ci right 7.902115e-04	k: 697	n:950000
Cons ci ratio: 2.434655e-03	ci left: 7.309258e-01	ci right 7.327086e-01	k: 695227	n:950000
KS ci ratio: 1.483196e-01	ci left: 6.802379e-04	ci right 7.902115e-04	k: 697	n:950000
ZNF704   950000 perm   518 sec   (1833 perm/sec)   p_kst 7.336842e-04   p_cons 7.318179e-01   p_joint 7.336842e-04

Joint ci ratio: 1.472682e-01	ci left: 6.831836e-04	ci right 7.927817e-04	k: 707	n:960000
Cons ci ratio: 2.421917e-03	ci left: 7.309345e-01	ci right 7.327079e-01	k: 702549	n:960000
KS ci ratio: 1.472682e-01	ci left: 6.831836e-04	ci right 7.927817e-04	k: 707	n:960000
ZNF704   960000 perm   527 sec   (1821 perm/sec)   p_kst 7.364583e-04   p_cons 7.318219e-01   p_joint 7.364583e-04

Joint ci ratio: 1.468542e-01	ci left: 6.801124e-04	ci right 7.888841e-04	k: 711	n:970000
Cons ci ratio: 2.409149e-03	ci left: 7.309801e-01	ci right 7.327443e-01	k: 709907	n:970000
KS ci ratio: 1.468542e-01	ci left: 6.801124e-04	ci right 7.888841e-04	k: 711	n:970000
ZNF704   970000 perm   536 sec   (1809 perm/sec)   p_kst 7.329897e-04   p_cons 7.318629e-01   p_joint 7.329897e-04

Joint ci ratio: 1.453307e-01	ci left: 6.879193e-04	ci right 7.966992e-04	k: 726	n:980000
Cons ci ratio: 2.396923e-03	ci left: 7.309687e-01	ci right 7.327238e-01	k: 717210	n:980000
KS ci ratio: 1.453307e-01	ci left: 6.879193e-04	ci right 7.966992e-04	k: 726	n:980000
ZNF704   980000 perm   545 sec   (1797 perm/sec)   p_kst 7.408163e-04   p_cons 7.318469e-01   p_joint 7.408163e-04

Joint ci ratio: 1.442433e-01	ci left: 6.916793e-04	ci right 8.001650e-04	k: 737	n:990000
Cons ci ratio: 2.385127e-03	ci left: 7.309170e-01	ci right 7.326634e-01	k: 724473	n:990000
KS ci ratio: 1.442433e-01	ci left: 6.916793e-04	ci right 8.001650e-04	k: 737	n:990000
ZNF704   990000 perm   555 sec   (1785 perm/sec)   p_kst 7.444444e-04   p_cons 7.317909e-01   p_joint 7.444444e-04

Joint ci ratio: 1.431800e-01	ci left: 6.953671e-04	ci right 8.035585e-04	k: 748	n:1000000
Cons ci ratio: 2.373347e-03	ci left: 7.308925e-01	ci right 7.326302e-01	k: 731762	n:1000000
KS ci ratio: 1.431800e-01	ci left: 6.953671e-04	ci right 8.035585e-04	k: 748	n:1000000
ZNF704   1000000 perm   564 sec   (1774 perm/sec)   p_kst 7.480000e-04   p_cons 7.317620e-01   p_joint 7.480000e-04

Joint ci ratio: 1.427046e-01	ci left: 6.932557e-04	ci right 8.007299e-04	k: 753	n:1010000
Cons ci ratio: 2.361131e-03	ci left: 7.309695e-01	ci right 7.326984e-01	k: 739153	n:1010000
KS ci ratio: 1.427046e-01	ci left: 6.932557e-04	ci right 8.007299e-04	k: 753	n:1010000
ZNF704   1010000 perm   573 sec   (1762 perm/sec)   p_kst 7.455446e-04   p_cons 7.318347e-01   p_joint 7.455446e-04

Joint ci ratio: 1.420468e-01	ci left: 6.930773e-04	ci right 7.999867e-04	k: 760	n:1020000
Cons ci ratio: 2.349460e-03	ci left: 7.309852e-01	ci right 7.327056e-01	k: 746483	n:1020000
KS ci ratio: 1.420468e-01	ci left: 6.930773e-04	ci right 7.999867e-04	k: 760	n:1020000
ZNF704   1020000 perm   583 sec   (1750 perm/sec)   p_kst 7.450980e-04   p_cons 7.318461e-01   p_joint 7.450980e-04

Joint ci ratio: 1.412141e-01	ci left: 6.947767e-04	ci right 8.012671e-04	k: 769	n:1030000
Cons ci ratio: 2.338168e-03	ci left: 7.309656e-01	ci right 7.326777e-01	k: 753777	n:1030000
KS ci ratio: 1.412141e-01	ci left: 6.947767e-04	ci right 8.012671e-04	k: 769	n:1030000
ZNF704   1030000 perm   592 sec   (1739 perm/sec)   p_kst 7.466019e-04   p_cons 7.318223e-01   p_joint 7.466019e-04

Joint ci ratio: 1.396800e-01	ci left: 7.038682e-04	ci right 8.104825e-04	k: 786	n:1040000
Cons ci ratio: 2.326662e-03	ci left: 7.310100e-01	ci right 7.327137e-01	k: 761137	n:1040000
KS ci ratio: 1.396800e-01	ci left: 7.038682e-04	ci right 8.104825e-04	k: 786	n:1040000
ZNF704   1040000 perm   602 sec   (1729 perm/sec)   p_kst 7.557692e-04   p_cons 7.318625e-01   p_joint 7.557692e-04

Joint ci ratio: 1.388007e-01	ci left: 7.063568e-04	ci right 8.126189e-04	k: 796	n:1050000
Cons ci ratio: 2.315206e-03	ci left: 7.310735e-01	ci right 7.327690e-01	k: 768518	n:1050000
KS ci ratio: 1.388007e-01	ci left: 7.063568e-04	ci right 8.126189e-04	k: 796	n:1050000
ZNF704   1050000 perm   611 sec   (1718 perm/sec)   p_kst 7.580952e-04   p_cons 7.319219e-01   p_joint 7.580952e-04

Joint ci ratio: 1.381093e-01	ci left: 7.069788e-04	ci right 8.127611e-04	k: 804	n:1060000
Cons ci ratio: 2.304338e-03	ci left: 7.310641e-01	ci right 7.327516e-01	k: 775823	n:1060000
KS ci ratio: 1.381093e-01	ci left: 7.069788e-04	ci right 8.127611e-04	k: 804	n:1060000
ZNF704   1060000 perm   621 sec   (1707 perm/sec)   p_kst 7.584906e-04   p_cons 7.319085e-01   p_joint 7.584906e-04

Joint ci ratio: 1.374281e-01	ci left: 7.075905e-04	ci right 8.128993e-04	k: 812	n:1070000
Cons ci ratio: 2.293097e-03	ci left: 7.311447e-01	ci right 7.328241e-01	k: 783224	n:1070000
KS ci ratio: 1.374281e-01	ci left: 7.075905e-04	ci right 8.128993e-04	k: 812	n:1070000
ZNF704   1070000 perm   630 sec   (1697 perm/sec)   p_kst 7.588785e-04   p_cons 7.319850e-01   p_joint 7.588785e-04

Joint ci ratio: 1.369239e-01	ci left: 7.064036e-04	ci right 8.111186e-04	k: 818	n:1080000
Cons ci ratio: 2.282687e-03	ci left: 7.311089e-01	ci right 7.327806e-01	k: 790501	n:1080000
KS ci ratio: 1.369239e-01	ci left: 7.064036e-04	ci right 8.111186e-04	k: 818	n:1080000
ZNF704   1080000 perm   640 sec   (1687 perm/sec)   p_kst 7.574074e-04   p_cons 7.319454e-01   p_joint 7.574074e-04

Joint ci ratio: 1.358496e-01	ci left: 7.114426e-04	ci right 8.160103e-04	k: 831	n:1090000
Cons ci ratio: 2.272035e-03	ci left: 7.311399e-01	ci right 7.328038e-01	k: 797850	n:1090000
KS ci ratio: 1.358496e-01	ci left: 7.114426e-04	ci right 8.160103e-04	k: 831	n:1090000
ZNF704   1090000 perm   650 sec   (1677 perm/sec)   p_kst 7.623853e-04   p_cons 7.319725e-01   p_joint 7.623853e-04

Joint ci ratio: 1.351207e-01	ci left: 7.128795e-04	ci right 8.170510e-04	k: 840	n:1100000
Cons ci ratio: 2.261787e-03	ci left: 7.311257e-01	ci right 7.327821e-01	k: 805150	n:1100000
KS ci ratio: 1.351207e-01	ci left: 7.128795e-04	ci right 8.170510e-04	k: 840	n:1100000
ZNF704   1100000 perm   660 sec   (1667 perm/sec)   p_kst 7.636364e-04   p_cons 7.319545e-01   p_joint 7.636364e-04

Joint ci ratio: 1.347209e-01	ci left: 7.108095e-04	ci right 8.143467e-04	k: 845	n:1110000
Cons ci ratio: 2.251362e-03	ci left: 7.311669e-01	ci right 7.328157e-01	k: 812511	n:1110000
KS ci ratio: 1.347209e-01	ci left: 7.108095e-04	ci right 8.143467e-04	k: 845	n:1110000
ZNF704   1110000 perm   670 sec   (1657 perm/sec)   p_kst 7.612613e-04   p_cons 7.319919e-01   p_joint 7.612613e-04

Joint ci ratio: 1.340099e-01	ci left: 7.122287e-04	ci right 8.153814e-04	k: 854	n:1120000
Cons ci ratio: 2.241064e-03	ci left: 7.312100e-01	ci right 7.328513e-01	k: 819875	n:1120000
KS ci ratio: 1.340099e-01	ci left: 7.122287e-04	ci right 8.153814e-04	k: 854	n:1120000
ZNF704   1120000 perm   680 sec   (1647 perm/sec)   p_kst 7.625000e-04   p_cons 7.320313e-01   p_joint 7.625000e-04

Joint ci ratio: 1.333873e-01	ci left: 7.127686e-04	ci right 8.154819e-04	k: 862	n:1130000
Cons ci ratio: 2.231132e-03	ci left: 7.312124e-01	ci right 7.328465e-01	k: 827194	n:1130000
KS ci ratio: 1.333873e-01	ci left: 7.127686e-04	ci right 8.154819e-04	k: 862	n:1130000
ZNF704   1130000 perm   691 sec   (1636 perm/sec)   p_kst 7.628319e-04   p_cons 7.320301e-01   p_joint 7.628319e-04

Joint ci ratio: 1.324693e-01	ci left: 7.166926e-04	ci right 8.192046e-04	k: 874	n:1140000
Cons ci ratio: 2.221321e-03	ci left: 7.312167e-01	ci right 7.328436e-01	k: 834515	n:1140000
KS ci ratio: 1.324693e-01	ci left: 7.166926e-04	ci right 8.192046e-04	k: 874	n:1140000
ZNF704   1140000 perm   701 sec   (1627 perm/sec)   p_kst 7.666667e-04   p_cons 7.320307e-01   p_joint 7.666667e-04

Joint ci ratio: 1.317931e-01	ci left: 7.180279e-04	ci right 8.201657e-04	k: 883	n:1150000
Cons ci ratio: 2.211472e-03	ci left: 7.312504e-01	ci right 7.328702e-01	k: 841870	n:1150000
KS ci ratio: 1.317931e-01	ci left: 7.180279e-04	ci right 8.201657e-04	k: 883	n:1150000
ZNF704   1150000 perm   711 sec   (1617 perm/sec)   p_kst 7.678261e-04   p_cons 7.320609e-01   p_joint 7.678261e-04

Joint ci ratio: 1.309805e-01	ci left: 7.210092e-04	ci right 8.228895e-04	k: 894	n:1160000
Cons ci ratio: 2.202072e-03	ci left: 7.312266e-01	ci right 7.328395e-01	k: 849159	n:1160000
KS ci ratio: 1.309805e-01	ci left: 7.210092e-04	ci right 8.228895e-04	k: 894	n:1160000
ZNF704   1160000 perm   722 sec   (1608 perm/sec)   p_kst 7.706897e-04   p_cons 7.320336e-01   p_joint 7.706897e-04

Joint ci ratio: 1.305438e-01	ci left: 7.198071e-04	ci right 8.211521e-04	k: 900	n:1170000
Cons ci ratio: 2.201563e-03	ci left: 7.296326e-01	ci right 7.312415e-01	k: 854612	n:1170000
KS ci ratio: 1.305438e-01	ci left: 7.198071e-04	ci right 8.211521e-04	k: 900	n:1170000
ZNF704   1170000 perm   732 sec   (1599 perm/sec)   p_kst 7.692308e-04   p_cons 7.304376e-01   p_joint 7.692308e-04

Joint ci ratio: 1.301832e-01	ci left: 7.178061e-04	ci right 8.185687e-04	k: 905	n:1180000
Cons ci ratio: 2.192292e-03	ci left: 7.296221e-01	ci right 7.312242e-01	k: 861900	n:1180000
KS ci ratio: 1.301832e-01	ci left: 7.178061e-04	ci right 8.185687e-04	k: 905	n:1180000
ZNF704   1180000 perm   743 sec   (1589 perm/sec)   p_kst 7.669492e-04   p_cons 7.304237e-01   p_joint 7.669492e-04

Joint ci ratio: 1.297544e-01	ci left: 7.166522e-04	ci right 8.168958e-04	k: 911	n:1190000
Cons ci ratio: 2.183062e-03	ci left: 7.296253e-01	ci right 7.312207e-01	k: 869204	n:1190000
KS ci ratio: 1.297544e-01	ci left: 7.166522e-04	ci right 8.168958e-04	k: 911	n:1190000
ZNF704   1190000 perm   754 sec   (1579 perm/sec)   p_kst 7.655462e-04   p_cons 7.304235e-01   p_joint 7.655462e-04

Joint ci ratio: 1.289088e-01	ci left: 7.203567e-04	ci right 8.204116e-04	k: 923	n:1200000
Cons ci ratio: 2.174137e-03	ci left: 7.295942e-01	ci right 7.311830e-01	k: 876467	n:1200000
KS ci ratio: 1.289088e-01	ci left: 7.203567e-04	ci right 8.204116e-04	k: 923	n:1200000
ZNF704   1200000 perm   764 sec   (1570 perm/sec)   p_kst 7.691667e-04   p_cons 7.303892e-01   p_joint 7.691667e-04

Joint ci ratio: 1.285616e-01	ci left: 7.184024e-04	ci right 8.178966e-04	k: 928	n:1210000
Cons ci ratio: 2.164834e-03	ci left: 7.296522e-01	ci right 7.312343e-01	k: 883837	n:1210000
KS ci ratio: 1.285616e-01	ci left: 7.184024e-04	ci right 8.178966e-04	k: 928	n:1210000
ZNF704   1210000 perm   775 sec   (1561 perm/sec)   p_kst 7.669421e-04   p_cons 7.304438e-01   p_joint 7.669421e-04

Joint ci ratio: 1.282172e-01	ci left: 7.164805e-04	ci right 8.154225e-04	k: 933	n:1220000
Cons ci ratio: 2.156160e-03	ci left: 7.296157e-01	ci right 7.311914e-01	k: 891093	n:1220000
KS ci ratio: 1.282172e-01	ci left: 7.164805e-04	ci right 8.154225e-04	k: 933	n:1220000
ZNF704   1220000 perm   786 sec   (1552 perm/sec)   p_kst 7.647541e-04   p_cons 7.304041e-01   p_joint 7.647541e-04

Joint ci ratio: 1.276038e-01	ci left: 7.177385e-04	ci right 8.163441e-04	k: 942	n:1230000
Cons ci ratio: 2.147152e-03	ci left: 7.296604e-01	ci right 7.312296e-01	k: 898448	n:1230000
KS ci ratio: 1.276038e-01	ci left: 7.177385e-04	ci right 8.163441e-04	k: 942	n:1230000
ZNF704   1230000 perm   797 sec   (1543 perm/sec)   p_kst 7.658537e-04   p_cons 7.304455e-01   p_joint 7.658537e-04

Joint ci ratio: 1.271998e-01	ci left: 7.166347e-04	ci right 8.147536e-04	k: 948	n:1240000
Cons ci ratio: 2.138658e-03	ci left: 7.296301e-01	ci right 7.311930e-01	k: 905711	n:1240000
KS ci ratio: 1.271998e-01	ci left: 7.166347e-04	ci right 8.147536e-04	k: 948	n:1240000
ZNF704   1240000 perm   808 sec   (1535 perm/sec)   p_kst 7.645161e-04   p_cons 7.304121e-01   p_joint 7.645161e-04

Joint ci ratio: 1.264029e-01	ci left: 7.201972e-04	ci right 8.181398e-04	k: 960	n:1250000
Cons ci ratio: 2.130078e-03	ci left: 7.296348e-01	ci right 7.311914e-01	k: 913017	n:1250000
KS ci ratio: 1.264029e-01	ci left: 7.201972e-04	ci right 8.181398e-04	k: 960	n:1250000
ZNF704   1250000 perm   819 sec   (1526 perm/sec)   p_kst 7.680000e-04   p_cons 7.304136e-01   p_joint 7.680000e-04

Joint ci ratio: 1.258151e-01	ci left: 7.213989e-04	ci right 8.190147e-04	k: 969	n:1260000
Cons ci ratio: 2.121819e-03	ci left: 7.295988e-01	ci right 7.311493e-01	k: 920272	n:1260000
KS ci ratio: 1.258151e-01	ci left: 7.213989e-04	ci right 8.190147e-04	k: 969	n:1260000
ZNF704   1260000 perm   830 sec   (1518 perm/sec)   p_kst 7.690476e-04   p_cons 7.303746e-01   p_joint 7.690476e-04

Joint ci ratio: 1.249801e-01	ci left: 7.256339e-04	ci right 8.231228e-04	k: 982	n:1270000
Cons ci ratio: 2.113447e-03	ci left: 7.296021e-01	ci right 7.311465e-01	k: 927576	n:1270000
KS ci ratio: 1.249801e-01	ci left: 7.256339e-04	ci right 8.231228e-04	k: 982	n:1270000
ZNF704   1270000 perm   841 sec   (1510 perm/sec)   p_kst 7.732283e-04   p_cons 7.303748e-01   p_joint 7.732283e-04

Joint ci ratio: 1.245375e-01	ci left: 7.252629e-04	ci right 8.223315e-04	k: 989	n:1280000
Cons ci ratio: 2.105220e-03	ci left: 7.295967e-01	ci right 7.311351e-01	k: 934869	n:1280000
KS ci ratio: 1.245375e-01	ci left: 7.252629e-04	ci right 8.223315e-04	k: 989	n:1280000
ZNF704   1280000 perm   852 sec   (1502 perm/sec)   p_kst 7.726563e-04   p_cons 7.303664e-01   p_joint 7.726563e-04

Joint ci ratio: 1.241619e-01	ci left: 7.241472e-04	ci right 8.207526e-04	k: 995	n:1290000
Cons ci ratio: 2.097064e-03	ci left: 7.295961e-01	ci right 7.311285e-01	k: 942168	n:1290000
KS ci ratio: 1.241619e-01	ci left: 7.241472e-04	ci right 8.207526e-04	k: 995	n:1290000
ZNF704   1290000 perm   864 sec   (1494 perm/sec)   p_kst 7.713178e-04   p_cons 7.303628e-01   p_joint 7.713178e-04

Joint ci ratio: 1.236047e-01	ci left: 7.252854e-04	ci right 8.215766e-04	k: 1004	n:1300000
Cons ci ratio: 2.089030e-03	ci left: 7.295901e-01	ci right 7.311166e-01	k: 949460	n:1300000
KS ci ratio: 1.236047e-01	ci left: 7.252854e-04	ci right 8.215766e-04	k: 1004	n:1300000
ZNF704   1300000 perm   875 sec   (1486 perm/sec)   p_kst 7.723077e-04   p_cons 7.303538e-01   p_joint 7.723077e-04

Joint ci ratio: 1.232985e-01	ci left: 7.234477e-04	ci right 8.192397e-04	k: 1009	n:1310000
Cons ci ratio: 2.081060e-03	ci left: 7.295896e-01	ci right 7.311102e-01	k: 956759	n:1310000
KS ci ratio: 1.232985e-01	ci left: 7.234477e-04	ci right 8.192397e-04	k: 1009	n:1310000
ZNF704   1310000 perm   886 sec   (1478 perm/sec)   p_kst 7.702290e-04   p_cons 7.303504e-01   p_joint 7.702290e-04

Joint ci ratio: 1.228735e-01	ci left: 7.231068e-04	ci right 8.184996e-04	k: 1016	n:1320000
Cons ci ratio: 2.073395e-03	ci left: 7.295481e-01	ci right 7.310630e-01	k: 964004	n:1320000
KS ci ratio: 1.228735e-01	ci left: 7.231068e-04	ci right 8.184996e-04	k: 1016	n:1320000
ZNF704   1320000 perm   898 sec   (1470 perm/sec)   p_kst 7.696970e-04   p_cons 7.303061e-01   p_joint 7.696970e-04

Joint ci ratio: 1.221547e-01	ci left: 7.264160e-04	ci right 8.216443e-04	k: 1028	n:1330000
Cons ci ratio: 2.065452e-03	ci left: 7.295765e-01	ci right 7.310857e-01	k: 971341	n:1330000
KS ci ratio: 1.221547e-01	ci left: 7.264160e-04	ci right 8.216443e-04	k: 1028	n:1330000
ZNF704   1330000 perm   909 sec   (1463 perm/sec)   p_kst 7.729323e-04   p_cons 7.303316e-01   p_joint 7.729323e-04

Joint ci ratio: 1.216239e-01	ci left: 7.275067e-04	ci right 8.224337e-04	k: 1037	n:1340000
Cons ci ratio: 2.057564e-03	ci left: 7.296112e-01	ci right 7.311147e-01	k: 978687	n:1340000
KS ci ratio: 1.216239e-01	ci left: 7.275067e-04	ci right 8.224337e-04	k: 1037	n:1340000
ZNF704   1340000 perm   921 sec   (1455 perm/sec)   p_kst 7.738806e-04   p_cons 7.303634e-01   p_joint 7.738806e-04

Joint ci ratio: 1.213322e-01	ci left: 7.257089e-04	ci right 8.201578e-04	k: 1042	n:1350000
Cons ci ratio: 2.049870e-03	ci left: 7.296254e-01	ci right 7.311233e-01	k: 986006	n:1350000
KS ci ratio: 1.213322e-01	ci left: 7.257089e-04	ci right 8.201578e-04	k: 1042	n:1350000
ZNF704   1350000 perm   933 sec   (1447 perm/sec)   p_kst 7.718519e-04   p_cons 7.303748e-01   p_joint 7.718519e-04

Joint ci ratio: 1.205257e-01	ci left: 7.303556e-04	ci right 8.247325e-04	k: 1056	n:1360000
Cons ci ratio: 2.042346e-03	ci left: 7.296232e-01	ci right 7.311155e-01	k: 993303	n:1360000
KS ci ratio: 1.205257e-01	ci left: 7.303556e-04	ci right 8.247325e-04	k: 1056	n:1360000
ZNF704   1360000 perm   944 sec   (1440 perm/sec)   p_kst 7.764706e-04   p_cons 7.303699e-01   p_joint 7.764706e-04

Joint ci ratio: 1.202984e-01	ci left: 7.278563e-04	ci right 8.217202e-04	k: 1060	n:1370000
Cons ci ratio: 2.034938e-03	ci left: 7.296144e-01	ci right 7.311014e-01	k: 1000591	n:1370000
KS ci ratio: 1.202984e-01	ci left: 7.278563e-04	ci right 8.217202e-04	k: 1060	n:1370000
ZNF704   1370000 perm   956 sec   (1433 perm/sec)   p_kst 7.737226e-04   p_cons 7.303584e-01   p_joint 7.737226e-04

Joint ci ratio: 1.196795e-01	ci left: 7.303138e-04	ci right 8.239758e-04	k: 1071	n:1380000
Cons ci ratio: 2.027494e-03	ci left: 7.296283e-01	ci right 7.311098e-01	k: 1007910	n:1380000
KS ci ratio: 1.196795e-01	ci left: 7.303138e-04	ci right 8.239758e-04	k: 1071	n:1380000
ZNF704   1380000 perm   968 sec   (1426 perm/sec)   p_kst 7.760870e-04   p_cons 7.303696e-01   p_joint 7.760870e-04

Joint ci ratio: 1.192907e-01	ci left: 7.299452e-04	ci right 8.232343e-04	k: 1078	n:1390000
Cons ci ratio: 2.020279e-03	ci left: 7.296132e-01	ci right 7.310894e-01	k: 1015189	n:1390000
KS ci ratio: 1.192907e-01	ci left: 7.299452e-04	ci right 8.232343e-04	k: 1078	n:1390000
ZNF704   1390000 perm   980 sec   (1418 perm/sec)   p_kst 7.755396e-04   p_cons 7.303518e-01   p_joint 7.755396e-04

Joint ci ratio: 1.189056e-01	ci left: 7.295823e-04	ci right 8.225030e-04	k: 1085	n:1400000
Cons ci ratio: 2.012899e-03	ci left: 7.296455e-01	ci right 7.311164e-01	k: 1022534	n:1400000
KS ci ratio: 1.189056e-01	ci left: 7.295823e-04	ci right 8.225030e-04	k: 1085	n:1400000
ZNF704   1400000 perm   992 sec   (1411 perm/sec)   p_kst 7.750000e-04   p_cons 7.303814e-01   p_joint 7.750000e-04

Joint ci ratio: 1.181463e-01	ci left: 7.340428e-04	ci right 8.268928e-04	k: 1099	n:1410000
Cons ci ratio: 2.005643e-03	ci left: 7.296689e-01	ci right 7.311345e-01	k: 1029867	n:1410000
KS ci ratio: 1.181463e-01	ci left: 7.340428e-04	ci right 8.268928e-04	k: 1099	n:1410000
ZNF704   1410000 perm   1004 sec   (1404 perm/sec)   p_kst 7.794326e-04   p_cons 7.304021e-01   p_joint 7.794326e-04

Joint ci ratio: 1.176659e-01	ci left: 7.350246e-04	ci right 8.275945e-04	k: 1108	n:1420000
Cons ci ratio: 1.998490e-03	ci left: 7.296869e-01	ci right 7.311473e-01	k: 1037193	n:1420000
KS ci ratio: 1.176659e-01	ci left: 7.350246e-04	ci right 8.275945e-04	k: 1108	n:1420000
ZNF704   1420000 perm   1016 sec   (1397 perm/sec)   p_kst 7.802817e-04   p_cons 7.304176e-01   p_joint 7.802817e-04

Joint ci ratio: 1.172437e-01	ci left: 7.353146e-04	ci right 8.275658e-04	k: 1116	n:1430000
Cons ci ratio: 1.991618e-03	ci left: 7.296642e-01	ci right 7.311195e-01	k: 1044461	n:1430000
KS ci ratio: 1.172437e-01	ci left: 7.353146e-04	ci right 8.275658e-04	k: 1116	n:1430000
ZNF704   1430000 perm   1029 sec   (1390 perm/sec)   p_kst 7.804196e-04   p_cons 7.303923e-01   p_joint 7.804196e-04

Joint ci ratio: 1.169302e-01	ci left: 7.342529e-04	ci right 8.261075e-04	k: 1122	n:1440000
Cons ci ratio: 1.984323e-03	ci left: 7.297397e-01	ci right 7.311899e-01	k: 1051870	n:1440000
KS ci ratio: 1.169302e-01	ci left: 7.342529e-04	ci right 8.261075e-04	k: 1122	n:1440000
ZNF704   1440000 perm   1041 sec   (1383 perm/sec)   p_kst 7.791667e-04   p_cons 7.304653e-01   p_joint 7.791667e-04

Joint ci ratio: 1.163616e-01	ci left: 7.365540e-04	ci right 8.282176e-04	k: 1133	n:1450000
Cons ci ratio: 1.977626e-03	ci left: 7.297107e-01	ci right 7.311559e-01	k: 1059129	n:1450000
KS ci ratio: 1.163616e-01	ci left: 7.365540e-04	ci right 8.282176e-04	k: 1133	n:1450000
ZNF704   1450000 perm   1053 sec   (1376 perm/sec)   p_kst 7.813793e-04   p_cons 7.304338e-01   p_joint 7.813793e-04

Joint ci ratio: 1.155489e-01	ci left: 7.421503e-04	ci right 8.338213e-04	k: 1149	n:1460000
Cons ci ratio: 1.970572e-03	ci left: 7.297671e-01	ci right 7.312073e-01	k: 1066512	n:1460000
KS ci ratio: 1.155489e-01	ci left: 7.421503e-04	ci right 8.338213e-04	k: 1149	n:1460000
ZNF704   1460000 perm   1066 sec   (1370 perm/sec)   p_kst 7.869863e-04   p_cons 7.304877e-01   p_joint 7.869863e-04

Joint ci ratio: 1.150001e-01	ci left: 7.443689e-04	ci right 8.358477e-04	k: 1160	n:1470000
Cons ci ratio: 1.963997e-03	ci left: 7.297418e-01	ci right 7.311770e-01	k: 1073776	n:1470000
KS ci ratio: 1.150001e-01	ci left: 7.443689e-04	ci right 8.358477e-04	k: 1160	n:1470000
ZNF704   1470000 perm   1078 sec   (1363 perm/sec)   p_kst 7.891156e-04   p_cons 7.304599e-01   p_joint 7.891156e-04

Joint ci ratio: 1.145569e-01	ci left: 7.452459e-04	ci right 8.364556e-04	k: 1169	n:1480000
Cons ci ratio: 1.957457e-03	ci left: 7.297228e-01	ci right 7.311533e-01	k: 1081049	n:1480000
KS ci ratio: 1.145569e-01	ci left: 7.452459e-04	ci right 8.364556e-04	k: 1169	n:1480000
ZNF704   1480000 perm   1091 sec   (1357 perm/sec)   p_kst 7.898649e-04   p_cons 7.304385e-01   p_joint 7.898649e-04

Joint ci ratio: 1.140704e-01	ci left: 7.467638e-04	ci right 8.377450e-04	k: 1179	n:1490000
Cons ci ratio: 1.950795e-03	ci left: 7.297418e-01	ci right 7.311674e-01	k: 1088378	n:1490000
KS ci ratio: 1.140704e-01	ci left: 7.467638e-04	ci right 8.377450e-04	k: 1179	n:1490000
ZNF704   1490000 perm   1104 sec   (1350 perm/sec)   p_kst 7.912752e-04   p_cons 7.304550e-01   p_joint 7.912752e-04

Joint ci ratio: 1.136857e-01	ci left: 7.469668e-04	ci right 8.376452e-04	k: 1187	n:1500000
Cons ci ratio: 1.944155e-03	ci left: 7.297698e-01	ci right 7.311906e-01	k: 1095721	n:1500000
KS ci ratio: 1.136857e-01	ci left: 7.469668e-04	ci right 8.376452e-04	k: 1187	n:1500000
ZNF704   1500000 perm   1117 sec   (1343 perm/sec)   p_kst 7.913333e-04   p_cons 7.304807e-01   p_joint 7.913333e-04

Joint ci ratio: 1.134949e-01	ci left: 7.445937e-04	ci right 8.348222e-04	k: 1191	n:1510000
Cons ci ratio: 1.937494e-03	ci left: 7.298154e-01	ci right 7.312314e-01	k: 1103091	n:1510000
KS ci ratio: 1.134949e-01	ci left: 7.445937e-04	ci right 8.348222e-04	k: 1191	n:1510000
ZNF704   1510000 perm   1130 sec   (1337 perm/sec)   p_kst 7.887417e-04   p_cons 7.305238e-01   p_joint 7.887417e-04

Joint ci ratio: 1.129747e-01	ci left: 7.467270e-04	ci right 8.367716e-04	k: 1202	n:1520000
Cons ci ratio: 1.931034e-03	ci left: 7.298334e-01	ci right 7.312447e-01	k: 1110420	n:1520000
KS ci ratio: 1.129747e-01	ci left: 7.467270e-04	ci right 8.367716e-04	k: 1202	n:1520000
ZNF704   1520000 perm   1143 sec   (1329 perm/sec)   p_kst 7.907895e-04   p_cons 7.305395e-01   p_joint 7.907895e-04

Joint ci ratio: 1.126009e-01	ci left: 7.469277e-04	ci right 8.366787e-04	k: 1210	n:1530000
Cons ci ratio: 1.924599e-03	ci left: 7.298590e-01	ci right 7.312656e-01	k: 1117761	n:1530000
KS ci ratio: 1.126009e-01	ci left: 7.469277e-04	ci right 8.366787e-04	k: 1210	n:1530000
ZNF704   1530000 perm   1156 sec   (1323 perm/sec)   p_kst 7.908497e-04   p_cons 7.305627e-01   p_joint 7.908497e-04

Joint ci ratio: 1.123231e-01	ci left: 7.458640e-04	ci right 8.352514e-04	k: 1216	n:1540000
Cons ci ratio: 1.918342e-03	ci left: 7.298609e-01	ci right 7.312629e-01	k: 1125066	n:1540000
KS ci ratio: 1.123231e-01	ci left: 7.458640e-04	ci right 8.352514e-04	k: 1216	n:1540000
ZNF704   1540000 perm   1170 sec   (1317 perm/sec)   p_kst 7.896104e-04   p_cons 7.305623e-01   p_joint 7.896104e-04

Joint ci ratio: 1.120015e-01	ci left: 7.454414e-04	ci right 8.345055e-04	k: 1223	n:1550000
Cons ci ratio: 1.912177e-03	ci left: 7.298563e-01	ci right 7.312538e-01	k: 1132361	n:1550000
KS ci ratio: 1.120015e-01	ci left: 7.454414e-04	ci right 8.345055e-04	k: 1223	n:1550000
ZNF704   1550000 perm   1183 sec   (1310 perm/sec)   p_kst 7.890323e-04   p_cons 7.305555e-01   p_joint 7.890323e-04

Joint ci ratio: 1.116826e-01	ci left: 7.450245e-04	ci right 8.337687e-04	k: 1230	n:1560000
Cons ci ratio: 1.905870e-03	ci left: 7.298934e-01	ci right 7.312865e-01	k: 1139721	n:1560000
KS ci ratio: 1.116826e-01	ci left: 7.450245e-04	ci right 8.337687e-04	k: 1230	n:1560000
ZNF704   1560000 perm   1196 sec   (1304 perm/sec)   p_kst 7.884615e-04   p_cons 7.305904e-01   p_joint 7.884615e-04

Joint ci ratio: 1.113664e-01	ci left: 7.446134e-04	ci right 8.330410e-04	k: 1237	n:1570000
Cons ci ratio: 1.899941e-03	ci left: 7.298645e-01	ci right 7.312531e-01	k: 1146978	n:1570000
KS ci ratio: 1.113664e-01	ci left: 7.446134e-04	ci right 8.330410e-04	k: 1237	n:1570000
ZNF704   1570000 perm   1210 sec   (1298 perm/sec)   p_kst 7.878981e-04   p_cons 7.305592e-01   p_joint 7.878981e-04

Joint ci ratio: 1.109193e-01	ci left: 7.460538e-04	ci right 8.342736e-04	k: 1247	n:1580000
Cons ci ratio: 1.894332e-03	ci left: 7.297808e-01	ci right 7.311652e-01	k: 1154148	n:1580000
KS ci ratio: 1.109193e-01	ci left: 7.460538e-04	ci right 8.342736e-04	k: 1247	n:1580000
ZNF704   1580000 perm   1223 sec   (1292 perm/sec)   p_kst 7.892405e-04   p_cons 7.304734e-01   p_joint 7.892405e-04

Joint ci ratio: 1.106537e-01	ci left: 7.450307e-04	ci right 8.329047e-04	k: 1253	n:1590000
Cons ci ratio: 1.888371e-03	ci left: 7.297819e-01	ci right 7.311619e-01	k: 1161451	n:1590000
KS ci ratio: 1.106537e-01	ci left: 7.450307e-04	ci right 8.329047e-04	k: 1253	n:1590000
ZNF704   1590000 perm   1237 sec   (1285 perm/sec)   p_kst 7.880503e-04   p_cons 7.304723e-01   p_joint 7.880503e-04

Joint ci ratio: 1.101279e-01	ci left: 7.476672e-04	ci right 8.354060e-04	k: 1265	n:1600000
Cons ci ratio: 1.882689e-03	ci left: 7.297361e-01	ci right 7.311118e-01	k: 1168679	n:1600000
KS ci ratio: 1.101279e-01	ci left: 7.476672e-04	ci right 8.354060e-04	k: 1265	n:1600000
ZNF704   1600000 perm   1251 sec   (1279 perm/sec)   p_kst 7.906250e-04   p_cons 7.304244e-01   p_joint 7.906250e-04

Joint ci ratio: 1.100412e-01	ci left: 7.442313e-04	ci right 8.314936e-04	k: 1267	n:1610000
Cons ci ratio: 1.876982e-03	ci left: 7.297070e-01	ci right 7.310785e-01	k: 1175933	n:1610000
KS ci ratio: 1.100412e-01	ci left: 7.442313e-04	ci right 8.314936e-04	k: 1267	n:1610000
ZNF704   1610000 perm   1264 sec   (1274 perm/sec)   p_kst 7.869565e-04   p_cons 7.303932e-01   p_joint 7.869565e-04

Joint ci ratio: 1.095668e-01	ci left: 7.462409e-04	ci right 8.333375e-04	k: 1278	n:1620000
Cons ci ratio: 1.871259e-03	ci left: 7.296925e-01	ci right 7.310598e-01	k: 1183210	n:1620000
KS ci ratio: 1.095668e-01	ci left: 7.462409e-04	ci right 8.333375e-04	k: 1278	n:1620000
ZNF704   1620000 perm   1278 sec   (1268 perm/sec)   p_kst 7.888889e-04   p_cons 7.303765e-01   p_joint 7.888889e-04

Joint ci ratio: 1.092683e-01	ci left: 7.458397e-04	ci right 8.326369e-04	k: 1285	n:1630000
Cons ci ratio: 1.865626e-03	ci left: 7.296702e-01	ci right 7.310333e-01	k: 1190474	n:1630000
KS ci ratio: 1.092683e-01	ci left: 7.458397e-04	ci right 8.326369e-04	k: 1285	n:1630000
ZNF704   1630000 perm   1292 sec   (1262 perm/sec)   p_kst 7.883436e-04   p_cons 7.303521e-01   p_joint 7.883436e-04

Joint ci ratio: 1.089721e-01	ci left: 7.454437e-04	ci right 8.319446e-04	k: 1292	n:1640000
Cons ci ratio: 1.860175e-03	ci left: 7.296201e-01	ci right 7.309791e-01	k: 1197692	n:1640000
KS ci ratio: 1.089721e-01	ci left: 7.454437e-04	ci right 8.319446e-04	k: 1292	n:1640000
ZNF704   1640000 perm   1305 sec   (1256 perm/sec)   p_kst 7.878049e-04   p_cons 7.303000e-01   p_joint 7.878049e-04

Joint ci ratio: 1.086784e-01	ci left: 7.450528e-04	ci right 8.312604e-04	k: 1299	n:1650000
Cons ci ratio: 1.854533e-03	ci left: 7.296215e-01	ci right 7.309765e-01	k: 1204994	n:1650000
KS ci ratio: 1.086784e-01	ci left: 7.450528e-04	ci right 8.312604e-04	k: 1299	n:1650000
ZNF704   1650000 perm   1320 sec   (1250 perm/sec)   p_kst 7.872727e-04   p_cons 7.302994e-01   p_joint 7.872727e-04

Joint ci ratio: 1.083041e-01	ci left: 7.458391e-04	ci right 8.318215e-04	k: 1308	n:1660000
Cons ci ratio: 1.848803e-03	ci left: 7.296525e-01	ci right 7.310033e-01	k: 1212345	n:1660000
KS ci ratio: 1.083041e-01	ci left: 7.458391e-04	ci right 8.318215e-04	k: 1308	n:1660000
ZNF704   1660000 perm   1334 sec   (1245 perm/sec)   p_kst 7.879518e-04   p_cons 7.303283e-01   p_joint 7.879518e-04

Joint ci ratio: 1.079336e-01	ci left: 7.466165e-04	ci right 8.323754e-04	k: 1317	n:1670000
Cons ci ratio: 1.843324e-03	ci left: 7.296406e-01	ci right 7.309874e-01	k: 1219625	n:1670000
KS ci ratio: 1.079336e-01	ci left: 7.466165e-04	ci right 8.323754e-04	k: 1317	n:1670000
ZNF704   1670000 perm   1348 sec   (1239 perm/sec)   p_kst 7.886228e-04   p_cons 7.303144e-01   p_joint 7.886228e-04

Joint ci ratio: 1.078112e-01	ci left: 7.439099e-04	ci right 8.292548e-04	k: 1320	n:1680000
Cons ci ratio: 1.837897e-03	ci left: 7.296282e-01	ci right 7.309710e-01	k: 1226904	n:1680000
KS ci ratio: 1.078112e-01	ci left: 7.439099e-04	ci right 8.292548e-04	k: 1320	n:1680000
ZNF704   1680000 perm   1362 sec   (1234 perm/sec)   p_kst 7.857143e-04   p_cons 7.303000e-01   p_joint 7.857143e-04

Joint ci ratio: 1.075267e-01	ci left: 7.435385e-04	ci right 8.286015e-04	k: 1327	n:1690000
Cons ci ratio: 1.832250e-03	ci left: 7.296734e-01	ci right 7.310122e-01	k: 1234280	n:1690000
KS ci ratio: 1.075267e-01	ci left: 7.435385e-04	ci right 8.286015e-04	k: 1327	n:1690000
ZNF704   1690000 perm   1376 sec   (1228 perm/sec)   p_kst 7.852071e-04   p_cons 7.303432e-01   p_joint 7.852071e-04

Joint ci ratio: 1.072042e-01	ci left: 7.437443e-04	ci right 8.285595e-04	k: 1335	n:1700000
Cons ci ratio: 1.826841e-03	ci left: 7.296781e-01	ci right 7.310129e-01	k: 1241588	n:1700000
KS ci ratio: 1.072042e-01	ci left: 7.437443e-04	ci right 8.285595e-04	k: 1335	n:1700000
ZNF704   1700000 perm   1390 sec   (1223 perm/sec)   p_kst 7.852941e-04   p_cons 7.303459e-01   p_joint 7.852941e-04

Joint ci ratio: 1.068052e-01	ci left: 7.450863e-04	ci right 8.297185e-04	k: 1345	n:1710000
Cons ci ratio: 1.821487e-03	ci left: 7.296810e-01	ci right 7.310118e-01	k: 1248893	n:1710000
KS ci ratio: 1.068052e-01	ci left: 7.450863e-04	ci right 8.297185e-04	k: 1345	n:1710000
ZNF704   1710000 perm   1405 sec   (1217 perm/sec)   p_kst 7.865497e-04   p_cons 7.303468e-01   p_joint 7.865497e-04

Joint ci ratio: 1.062930e-01	ci left: 7.481112e-04	ci right 8.326540e-04	k: 1358	n:1720000
Cons ci ratio: 1.816191e-03	ci left: 7.296815e-01	ci right 7.310085e-01	k: 1256194	n:1720000
KS ci ratio: 1.062930e-01	ci left: 7.481112e-04	ci right 8.326540e-04	k: 1358	n:1720000
ZNF704   1720000 perm   1420 sec   (1211 perm/sec)   p_kst 7.895349e-04   p_cons 7.303453e-01   p_joint 7.895349e-04

Joint ci ratio: 1.056341e-01	ci left: 7.533532e-04	ci right 8.379278e-04	k: 1375	n:1730000
Cons ci ratio: 1.810811e-03	ci left: 7.297103e-01	ci right 7.310334e-01	k: 1263544	n:1730000
KS ci ratio: 1.056341e-01	ci left: 7.533532e-04	ci right 8.379278e-04	k: 1375	n:1730000
ZNF704   1730000 perm   1434 sec   (1206 perm/sec)   p_kst 7.947977e-04   p_cons 7.303723e-01   p_joint 7.947977e-04

Joint ci ratio: 1.052142e-01	ci left: 7.551787e-04	ci right 8.396005e-04	k: 1386	n:1740000
Cons ci ratio: 1.805923e-03	ci left: 7.296416e-01	ci right 7.309611e-01	k: 1270725	n:1740000
KS ci ratio: 1.052142e-01	ci left: 7.551787e-04	ci right 8.396005e-04	k: 1386	n:1740000
ZNF704   1740000 perm   1449 sec   (1201 perm/sec)   p_kst 7.965517e-04   p_cons 7.303017e-01   p_joint 7.965517e-04

Joint ci ratio: 1.049498e-01	ci left: 7.547583e-04	ci right 8.389079e-04	k: 1393	n:1750000
Cons ci ratio: 1.800777e-03	ci left: 7.296389e-01	ci right 7.309546e-01	k: 1278020	n:1750000
KS ci ratio: 1.049498e-01	ci left: 7.547583e-04	ci right 8.389079e-04	k: 1393	n:1750000
ZNF704   1750000 perm   1464 sec   (1196 perm/sec)   p_kst 7.960000e-04   p_cons 7.302971e-01   p_joint 7.960000e-04

Joint ci ratio: 1.047996e-01	ci left: 7.526830e-04	ci right 8.364737e-04	k: 1397	n:1760000
Cons ci ratio: 1.795359e-03	ci left: 7.297057e-01	ci right 7.310175e-01	k: 1285437	n:1760000
KS ci ratio: 1.047996e-01	ci left: 7.526830e-04	ci right 8.364737e-04	k: 1397	n:1760000
ZNF704   1760000 perm   1479 sec   (1190 perm/sec)   p_kst 7.937500e-04   p_cons 7.303619e-01   p_joint 7.937500e-04

Joint ci ratio: 1.045755e-01	ci left: 7.517316e-04	ci right 8.352265e-04	k: 1403	n:1770000
Cons ci ratio: 1.790058e-03	ci left: 7.297563e-01	ci right 7.310644e-01	k: 1292827	n:1770000
KS ci ratio: 1.045755e-01	ci left: 7.517316e-04	ci right 8.352265e-04	k: 1403	n:1770000
ZNF704   1770000 perm   1493 sec   (1185 perm/sec)   p_kst 7.926554e-04   p_cons 7.304107e-01   p_joint 7.926554e-04

Joint ci ratio: 1.043528e-01	ci left: 7.507911e-04	ci right 8.339930e-04	k: 1409	n:1780000
Cons ci ratio: 1.784911e-03	ci left: 7.297829e-01	ci right 7.310872e-01	k: 1300175	n:1780000
KS ci ratio: 1.043528e-01	ci left: 7.507911e-04	ci right 8.339930e-04	k: 1409	n:1780000
ZNF704   1780000 perm   1508 sec   (1180 perm/sec)   p_kst 7.915730e-04   p_cons 7.304354e-01   p_joint 7.915730e-04

Joint ci ratio: 1.039847e-01	ci left: 7.520378e-04	ci right 8.350659e-04	k: 1419	n:1790000
Cons ci ratio: 1.780081e-03	ci left: 7.297487e-01	ci right 7.310494e-01	k: 1307415	n:1790000
KS ci ratio: 1.039847e-01	ci left: 7.520378e-04	ci right 8.350659e-04	k: 1419	n:1790000
ZNF704   1790000 perm   1524 sec   (1175 perm/sec)   p_kst 7.927374e-04   p_cons 7.303994e-01   p_joint 7.927374e-04

Joint ci ratio: 1.036930e-01	ci left: 7.521888e-04	ci right 8.349865e-04	k: 1427	n:1800000
Cons ci ratio: 1.774994e-03	ci left: 7.297806e-01	ci right 7.310776e-01	k: 1314773	n:1800000
KS ci ratio: 1.036930e-01	ci left: 7.521888e-04	ci right 8.349865e-04	k: 1427	n:1800000
ZNF704   1800000 perm   1539 sec   (1170 perm/sec)   p_kst 7.927778e-04   p_cons 7.304294e-01   p_joint 7.927778e-04

Joint ci ratio: 1.035482e-01	ci left: 7.501857e-04	ci right 8.326405e-04	k: 1431	n:1810000
Cons ci ratio: 1.770343e-03	ci left: 7.297247e-01	ci right 7.310182e-01	k: 1321973	n:1810000
KS ci ratio: 1.035482e-01	ci left: 7.501857e-04	ci right 8.326405e-04	k: 1431	n:1810000
ZNF704   1810000 perm   1555 sec   (1164 perm/sec)   p_kst 7.906077e-04   p_cons 7.303718e-01   p_joint 7.906077e-04

Joint ci ratio: 1.033320e-01	ci left: 7.492752e-04	ci right 8.314476e-04	k: 1437	n:1820000
Cons ci ratio: 1.765533e-03	ci left: 7.297129e-01	ci right 7.310029e-01	k: 1329252	n:1820000
KS ci ratio: 1.033320e-01	ci left: 7.492752e-04	ci right 8.314476e-04	k: 1437	n:1820000
ZNF704   1820000 perm   1570 sec   (1159 perm/sec)   p_kst 7.895604e-04   p_cons 7.303582e-01   p_joint 7.895604e-04

Joint ci ratio: 1.032245e-01	ci left: 7.467777e-04	ci right 8.285859e-04	k: 1440	n:1830000
Cons ci ratio: 1.760765e-03	ci left: 7.297007e-01	ci right 7.309871e-01	k: 1336530	n:1830000
KS ci ratio: 1.032245e-01	ci left: 7.467777e-04	ci right 8.285859e-04	k: 1440	n:1830000
ZNF704   1830000 perm   1586 sec   (1154 perm/sec)   p_kst 7.868852e-04   p_cons 7.303443e-01   p_joint 7.868852e-04

Joint ci ratio: 1.028682e-01	ci left: 7.480139e-04	ci right 8.296575e-04	k: 1450	n:1840000
Cons ci ratio: 1.756028e-03	ci left: 7.296902e-01	ci right 7.309732e-01	k: 1343811	n:1840000
KS ci ratio: 1.028682e-01	ci left: 7.480139e-04	ci right 8.296575e-04	k: 1450	n:1840000
ZNF704   1840000 perm   1602 sec   (1149 perm/sec)   p_kst 7.880435e-04   p_cons 7.303321e-01   p_joint 7.880435e-04

Joint ci ratio: 1.026209e-01	ci left: 7.476571e-04	ci right 8.290538e-04	k: 1457	n:1850000
Cons ci ratio: 1.751351e-03	ci left: 7.296750e-01	ci right 7.309546e-01	k: 1351083	n:1850000
KS ci ratio: 1.026209e-01	ci left: 7.476571e-04	ci right 8.290538e-04	k: 1457	n:1850000
ZNF704   1850000 perm   1617 sec   (1144 perm/sec)   p_kst 7.875676e-04   p_cons 7.303151e-01   p_joint 7.875676e-04

Joint ci ratio: 1.024455e-01	ci left: 7.462567e-04	ci right 8.273537e-04	k: 1462	n:1860000
Cons ci ratio: 1.746611e-03	ci left: 7.296826e-01	ci right 7.309587e-01	k: 1358397	n:1860000
KS ci ratio: 1.024455e-01	ci left: 7.462567e-04	ci right 8.273537e-04	k: 1462	n:1860000
ZNF704   1860000 perm   1633 sec   (1139 perm/sec)   p_kst 7.860215e-04   p_cons 7.303210e-01   p_joint 7.860215e-04

Joint ci ratio: 1.023059e-01	ci left: 7.443502e-04	ci right 8.251231e-04	k: 1466	n:1870000
Cons ci ratio: 1.741914e-03	ci left: 7.296890e-01	ci right 7.309616e-01	k: 1365709	n:1870000
KS ci ratio: 1.023059e-01	ci left: 7.443502e-04	ci right 8.251231e-04	k: 1466	n:1870000
ZNF704   1870000 perm   1649 sec   (1134 perm/sec)   p_kst 7.839572e-04   p_cons 7.303257e-01   p_joint 7.839572e-04

Joint ci ratio: 1.021320e-01	ci left: 7.429825e-04	ci right 8.234618e-04	k: 1471	n:1880000
Cons ci ratio: 1.737372e-03	ci left: 7.296687e-01	ci right 7.309380e-01	k: 1372971	n:1880000
KS ci ratio: 1.021320e-01	ci left: 7.429825e-04	ci right 8.234618e-04	k: 1471	n:1880000
ZNF704   1880000 perm   1665 sec   (1129 perm/sec)   p_kst 7.824468e-04   p_cons 7.303037e-01   p_joint 7.824468e-04

Joint ci ratio: 1.017525e-01	ci left: 7.447231e-04	ci right 8.250732e-04	k: 1482	n:1890000
Cons ci ratio: 1.732923e-03	ci left: 7.296354e-01	ci right 7.309014e-01	k: 1380208	n:1890000
KS ci ratio: 1.017525e-01	ci left: 7.447231e-04	ci right 8.250732e-04	k: 1482	n:1890000
ZNF704   1890000 perm   1680 sec   (1125 perm/sec)   p_kst 7.841270e-04   p_cons 7.302688e-01   p_joint 7.841270e-04

Joint ci ratio: 1.016498e-01	ci left: 7.423423e-04	ci right 8.223499e-04	k: 1485	n:1900000
Cons ci ratio: 1.728416e-03	ci left: 7.296236e-01	ci right 7.308863e-01	k: 1387485	n:1900000
KS ci ratio: 1.016498e-01	ci left: 7.423423e-04	ci right 8.223499e-04	k: 1485	n:1900000
ZNF704   1900000 perm   1696 sec   (1120 perm/sec)   p_kst 7.815789e-04   p_cons 7.302553e-01   p_joint 7.815789e-04

Joint ci ratio: 1.016158e-01	ci left: 7.389658e-04	ci right 8.185813e-04	k: 1486	n:1910000
Cons ci ratio: 1.723937e-03	ci left: 7.296134e-01	ci right 7.308728e-01	k: 1394765	n:1910000
KS ci ratio: 1.016158e-01	ci left: 7.389658e-04	ci right 8.185813e-04	k: 1486	n:1910000
ZNF704   1910000 perm   1712 sec   (1116 perm/sec)   p_kst 7.780105e-04   p_cons 7.302435e-01   p_joint 7.780105e-04

Joint ci ratio: 1.013097e-01	ci left: 7.396856e-04	ci right 8.191243e-04	k: 1495	n:1920000
Cons ci ratio: 1.719398e-03	ci left: 7.296253e-01	ci right 7.308813e-01	k: 1402087	n:1920000
KS ci ratio: 1.013097e-01	ci left: 7.396856e-04	ci right 8.191243e-04	k: 1495	n:1920000
ZNF704   1920000 perm   1728 sec   (1111 perm/sec)   p_kst 7.786458e-04   p_cons 7.302536e-01   p_joint 7.786458e-04

Joint ci ratio: 1.010735e-01	ci left: 7.393882e-04	ci right 8.185988e-04	k: 1502	n:1930000
Cons ci ratio: 1.714842e-03	ci left: 7.296489e-01	ci right 7.309017e-01	k: 1409432	n:1930000
KS ci ratio: 1.010735e-01	ci left: 7.393882e-04	ci right 8.185988e-04	k: 1502	n:1930000
ZNF704   1930000 perm   1744 sec   (1107 perm/sec)   p_kst 7.782383e-04   p_cons 7.302756e-01   p_joint 7.782383e-04

Joint ci ratio: 1.006391e-01	ci left: 7.421090e-04	ci right 8.212492e-04	k: 1515	n:1940000
Cons ci ratio: 1.710375e-03	ci left: 7.296599e-01	ci right 7.309095e-01	k: 1416753	n:1940000
KS ci ratio: 1.006391e-01	ci left: 7.421090e-04	ci right 8.212492e-04	k: 1515	n:1940000
ZNF704   1940000 perm   1760 sec   (1102 perm/sec)   p_kst 7.809278e-04   p_cons 7.302851e-01   p_joint 7.809278e-04

Joint ci ratio: 1.004075e-01	ci left: 7.418028e-04	ci right 8.207176e-04	k: 1522	n:1950000
Cons ci ratio: 1.705953e-03	ci left: 7.296688e-01	ci right 7.309151e-01	k: 1424070	n:1950000
KS ci ratio: 1.004075e-01	ci left: 7.418028e-04	ci right 8.207176e-04	k: 1522	n:1950000
ZNF704   1950000 perm   1776 sec   (1098 perm/sec)   p_kst 7.805128e-04   p_cons 7.302923e-01   p_joint 7.805128e-04

Joint ci ratio: 1.002104e-01	ci left: 7.410025e-04	ci right 8.196683e-04	k: 1528	n:1960000
Cons ci ratio: 1.701472e-03	ci left: 7.296990e-01	ci right 7.309421e-01	k: 1431429	n:1960000
KS ci ratio: 1.002104e-01	ci left: 7.410025e-04	ci right 8.196683e-04	k: 1528	n:1960000
ZNF704   1960000 perm   1792 sec   (1094 perm/sec)   p_kst 7.795918e-04   p_cons 7.303209e-01   p_joint 7.795918e-04

Joint ci ratio: 9.985177e-02	ci left: 7.426852e-04	ci right 8.212309e-04	k: 1539	n:1970000
Cons ci ratio: 1.697065e-03	ci left: 7.297198e-01	ci right 7.309597e-01	k: 1438770	n:1970000
KS ci ratio: 9.985177e-02	ci left: 7.426852e-04	ci right 8.212309e-04	k: 1539	n:1970000
ZNF704   1970000 perm   1809 sec   (1089 perm/sec)   p_kst 7.812183e-04   p_cons 7.303401e-01   p_joint 7.812183e-04

Outputting figure to mutsig2_images.part000000000199/ZNF704.2_1271_1970000_0.00078122_0.73034_0.00078122.png
                gene_name: ZNF704
               theta_stop: 0.100 
                    nperm: 1970000 
                     p_ks: 0.00078 
        ci_ks_bounds_left: 0.00074 
       ci_ks_bounds_right: 0.00082 
                   p_cons: 0.73 
      ci_cons_bounds_left: 0.73 
     ci_cons_bounds_right: 0.73 
                  p_joint: 0.00078 
     ci_joint_bounds_left: 0.00074 
    ci_joint_bounds_right: 0.00082 

Current progress: 57 percent done.
ZNF737
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 9.695188e-02	ci left: 1.336465e-01	ci right 1.473637e-01	k: 1404	n:10000
Cons ci ratio: 5.350728e-03	ci left: 9.789852e-01	ci right 9.843289e-01	k: 9818	n:10000
KS ci ratio: 2.801592e-01	ci left: 1.650803e-02	ci right 2.197711e-02	k: 191	n:10000
ZNF737   10000 perm   2 sec   (6470 perm/sec)   p_kst 1.910000e-02   p_cons 9.818000e-01   p_joint 1.404000e-01

Joint ci ratio: 4.998993e-02	ci left: 2.292368e-01	ci right 2.410403e-01	k: 4702	n:20000
Cons ci ratio: 3.448962e-03	ci left: 9.830071e-01	ci right 9.864499e-01	k: 19696	n:20000
KS ci ratio: 1.983707e-01	ci left: 1.724818e-02	ci right 2.109342e-02	k: 382	n:20000
ZNF737   20000 perm   3 sec   (5740 perm/sec)   p_kst 1.910000e-02   p_cons 9.848000e-01   p_joint 2.351000e-01

Joint ci ratio: 4.559181e-02	ci left: 1.931730e-01	ci right 2.022189e-01	k: 5930	n:30000
Cons ci ratio: 2.802086e-03	ci left: 9.834902e-01	ci right 9.862814e-01	k: 29548	n:30000
KS ci ratio: 1.585573e-01	ci left: 1.838165e-02	ci right 2.157893e-02	k: 598	n:30000
ZNF737   30000 perm   5 sec   (5477 perm/sec)   p_kst 1.993333e-02   p_cons 9.849333e-01   p_joint 1.976667e-01

Joint ci ratio: 3.693498e-02	ci left: 2.156504e-01	ci right 2.237903e-01	k: 8788	n:40000
Cons ci ratio: 2.402135e-03	ci left: 9.839943e-01	ci right 9.863845e-01	k: 39409	n:40000
KS ci ratio: 1.368497e-01	ci left: 1.872293e-02	ci right 2.149735e-02	k: 803	n:40000
ZNF737   40000 perm   8 sec   (5314 perm/sec)   p_kst 2.007500e-02   p_cons 9.852250e-01   p_joint 2.197000e-01

Joint ci ratio: 1.867095e-02	ci left: 4.641380e-01	ci right 4.729056e-01	k: 23426	n:50000
Cons ci ratio: 2.154448e-03	ci left: 9.840408e-01	ci right 9.861823e-01	k: 49257	n:50000
KS ci ratio: 1.221545e-01	ci left: 1.894599e-02	ci right 2.143016e-02	k: 1008	n:50000
ZNF737   50000 perm   10 sec   (5179 perm/sec)   p_kst 2.016000e-02   p_cons 9.851400e-01   p_joint 4.685200e-01

Joint ci ratio: 1.705521e-02	ci left: 4.642006e-01	ci right 4.722025e-01	k: 28092	n:60000
Cons ci ratio: 1.975898e-03	ci left: 9.839953e-01	ci right 9.859574e-01	k: 59100	n:60000
KS ci ratio: 1.112679e-01	ci left: 1.913787e-02	ci right 2.140887e-02	k: 1215	n:60000
ZNF737   60000 perm   12 sec   (5054 perm/sec)   p_kst 2.025000e-02   p_cons 9.850000e-01   p_joint 4.682000e-01

Joint ci ratio: 2.705904e-02	ci left: 2.275264e-01	ci right 2.337817e-01	k: 16145	n:70000
Cons ci ratio: 1.842397e-03	ci left: 9.838514e-01	ci right 9.856795e-01	k: 68935	n:70000
KS ci ratio: 1.034491e-01	ci left: 1.905921e-02	ci right 2.115226e-02	k: 1406	n:70000
ZNF737   70000 perm   14 sec   (4943 perm/sec)   p_kst 2.008571e-02   p_cons 9.847857e-01   p_joint 2.306429e-01

Joint ci ratio: 2.535569e-02	ci left: 2.271123e-01	ci right 2.329573e-01	k: 18402	n:80000
Cons ci ratio: 1.720332e-03	ci left: 9.839667e-01	ci right 9.856729e-01	k: 78787	n:80000
KS ci ratio: 9.692179e-02	ci left: 1.906546e-02	ci right 2.101957e-02	k: 1602	n:80000
ZNF737   80000 perm   17 sec   (4840 perm/sec)   p_kst 2.002500e-02   p_cons 9.848375e-01   p_joint 2.300250e-01

Outputting figure to mutsig2_images.part000000000199/ZNF737.2_1627_80000_0.020025_0.98484_0.23003.png
                gene_name: ZNF737
               theta_stop: 0.097 
                    nperm: 80000 
                     p_ks: 0.020 
        ci_ks_bounds_left: 0.019 
       ci_ks_bounds_right: 0.021 
                   p_cons: 0.98 
      ci_cons_bounds_left: 0.98 
     ci_cons_bounds_right: 0.99 
                  p_joint: 0.23 
     ci_joint_bounds_left: 0.23 
    ci_joint_bounds_right: 0.23 

Current progress: 71 percent done.
ZNF749
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.162458e-02	ci left: 5.960420e-01	ci right 6.152964e-01	k: 6057	n:10000
Cons ci ratio: 1.830504e-02	ci left: 8.133433e-01	ci right 8.284693e-01	k: 8210	n:10000
KS ci ratio: 8.321448e-02	ci left: 1.739892e-01	ci right 1.891967e-01	k: 1815	n:10000
ZNF749   10000 perm   2 sec   (6160 perm/sec)   p_kst 1.815000e-01   p_cons 8.210000e-01   p_joint 6.057000e-01

Outputting figure to mutsig2_images.part000000000199/ZNF749.2_2349_10000_0.1815_0.821_0.6057.png
                gene_name: ZNF749
               theta_stop: 0.083 
                    nperm: 10000 
                     p_ks: 0.18 
        ci_ks_bounds_left: 0.17 
       ci_ks_bounds_right: 0.19 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.83 
                  p_joint: 0.61 
     ci_joint_bounds_left: 0.60 
    ci_joint_bounds_right: 0.62 

Current progress: 86 percent done.
ZNF777
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.931551e-02	ci left: 3.775373e-01	ci right 3.967285e-01	k: 3871	n:10000
Cons ci ratio: 1.776107e-02	ci left: 8.221868e-01	ci right 8.370206e-01	k: 8297	n:10000
KS ci ratio: 1.895761e-01	ci left: 3.710237e-02	ci right 4.496786e-02	k: 409	n:10000
ZNF777   10000 perm   2 sec   (6057 perm/sec)   p_kst 4.090000e-02   p_cons 8.297000e-01   p_joint 3.871000e-01

Joint ci ratio: 5.629096e-02	ci left: 1.896276e-01	ci right 2.006612e-01	k: 3902	n:20000
Cons ci ratio: 1.322848e-02	ci left: 8.090424e-01	ci right 8.198660e-01	k: 16290	n:20000
KS ci ratio: 1.340536e-01	ci left: 3.824541e-02	ci right 4.378904e-02	k: 819	n:20000
ZNF777   20000 perm   4 sec   (5425 perm/sec)   p_kst 4.095000e-02   p_cons 8.145000e-01   p_joint 1.951000e-01

Joint ci ratio: 4.623403e-02	ci left: 1.888117e-01	ci right 1.977811e-01	k: 5798	n:30000
Cons ci ratio: 1.080210e-02	ci left: 8.100208e-01	ci right 8.188515e-01	k: 24434	n:30000
KS ci ratio: 1.091778e-01	ci left: 3.894635e-02	ci right 4.347638e-02	k: 1235	n:30000
ZNF777   30000 perm   6 sec   (5193 perm/sec)   p_kst 4.116667e-02   p_cons 8.144667e-01   p_joint 1.932667e-01

Joint ci ratio: 3.040935e-02	ci left: 2.890152e-01	ci right 2.979648e-01	k: 11739	n:40000
Cons ci ratio: 9.320528e-03	ci left: 8.117390e-01	ci right 8.193652e-01	k: 32623	n:40000
KS ci ratio: 9.592526e-02	ci left: 3.814944e-02	ci right 4.201769e-02	k: 1602	n:40000
ZNF777   40000 perm   8 sec   (5032 perm/sec)   p_kst 4.005000e-02   p_cons 8.155750e-01   p_joint 2.934750e-01

Outputting figure to mutsig2_images.part000000000199/ZNF777.2_2516_40000_0.04005_0.81558_0.29347.png
                gene_name: ZNF777
               theta_stop: 0.096 
                    nperm: 40000 
                     p_ks: 0.040 
        ci_ks_bounds_left: 0.038 
       ci_ks_bounds_right: 0.042 
                   p_cons: 0.82 
      ci_cons_bounds_left: 0.81 
     ci_cons_bounds_right: 0.82 
                  p_joint: 0.29 
     ci_joint_bounds_left: 0.29 
    ci_joint_bounds_right: 0.30 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000199
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 199 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

Sender: LSF System <lsf@node1701>
Subject: Job 8704432: <scatter_238745> Done

Job <scatter_238745> was submitted from host <node372> by user <cgaadm> in cluster <cromwell>.
Job was executed on host(s) <node1701>, in queue <cga>, as user <cgaadm> in cluster <cromwell>.
</home/unix/cgaadm> was used as the home directory.
</xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000200> was used as the working directory.
Started at Thu Nov 15 19:38:30 2012
Results reported at Fri Nov 16 03:11:17 2012

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000200.tries`
echo -n `expr ${tries} + 1` > /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000200.tries
python /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/run_matlab.py --with-display /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 200  -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200

return_code=$?
if [ ${return_code} -ne 0 ]; then
tries=`cat /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000200.tries`
if [ ${return_code} -ne 130 -a ${tries} -lt 3 ]; then
exit 167;
else
echo ${return_code} > exited;
exit 1;
fi
else
touch success
fi
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time   :  27501.60 sec.
    Max Memory :      6149 MB
    Max Swap   :      8563 MB

    Max Processes  :         7
    Max Threads    :        58

The output (if any) follows:

fh_MutSigRun
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
-whichjob
200
-i
THCA
-maf
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf
-ppr
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt
-cov
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat
-cat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt
-pat
/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt
-genes
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt
-b
hg19
-genesets
/xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt
-cosmic
/xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv
-refseq
/xchip/cga1/annotation/db/ucsc/hg19/R.mat
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt
-jobcount
200

                    mutation_blacklist: [1x73 char]
              perform_mutsig2_analysis: 1
    use_sample_specific_mutation_rates: 1
       analyze_silent_nonsilent_ratios: 1
                sig_calculation_method: 'projection'
                          print_report: 0
                               patlist: [1x117 char]
                               covfile: [1x133 char]
                               mutfile: [1x108 char]
                               catfile: [1x134 char]
                              genelist: [1x73 char]
                                 build: 'hg19'
                            contextdir: []
               geneset_collection_file: [1x72 char]
                          build_cosmic: 'hg19'
                           cosmic_file: [1x70 char]
                          build_refseq: [1x41 char]
                             build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
                   build_genome_region: '/xchip/cga1/annotation/db/ucsc/hg19'
                                 quick: 0
              output_per_exon_coverage: 1
             output_per_exon_mutations: 0
            output_final_mutation_list: 1
              output_per_gene_coverage: 1
       output_per_gene_mutation_counts: 1
          output_sample_sig_gene_table: 1
    mutation_preprocessing_report_file: [1x138 char]
        mutation_filtering_report_file: './THCA.mutation_filtering_report.txt'
                  using_scatter_gather: 1
               scatter_gather_jobcount: 200
               scatter_gather_whichjob: 200
                            is_scatter: 1
                             is_gather: 0

LOADING MUTATION DATA FOR SET "THCA"
Loading coverage... 

The following 769 genes have very low coverage and are being omitted:
    'A2LD1'            [         0]
    'AG2'              [         0]
    'AGBL3'            [         0]
    'AMELY'            [    0.2183]
    'AMH'              [    0.2275]
    'AMY1A'            [    0.1068]
    'AMY1B'            [    0.1068]
    'AMY1C'            [    0.1068]
    'ANKRD18A'         [    0.1207]
    'ANKRD20A2'        [    0.0708]
    'ANKRD20A3'        [    0.1679]
    'ANKRD31'          [         0]
    'ANKRD33B'         [         0]
    'ANKRD34C'         [         0]
    'ANKRD43'          [    0.2307]
    'ANKRD9'           [    0.1217]
    'ANXA8'            [    0.0180]
    'ANXA8L1'          [    0.0180]
    'ANXA8L2'          [    0.1693]
    'APLN'             [    0.1120]
    'ARHGAP23'         [         0]
    'ARHGAP40'         [         0]
    'ARHGAP42'         [         0]
    'ARHGEF33'         [         0]
    'ARL17A'           [    0.0434]
    'ARL17B'           [    0.0012]
    'ARL5C'            [         0]
    'ASAH2B'           [    0.2150]
    'ASCL2'            [    0.0019]
    'ATXN1L'           [         0]
    'ATXN7L1'          [    0.1689]
    'ATXN7L3B'         [    0.1479]
    'B3GALT6'          [    0.1971]
    'BCORL2'           [         0]
    'BEAN'             [         0]
    'BET3L'            [         0]
    'BHLHA15'          [    0.1341]
    'BHLHA9'           [         0]
    'BOLA2'            [         0]
    'BOLA2B'           [         0]
    'BOP1'             [    0.0982]
    'BPY2'             [    0.0071]
    'BPY2B'            [    0.0071]
    'BPY2C'            [    0.0071]
    'BSPH1'            [         0]
    'BTBD18'           [         0]
    'BTBD19'           [         0]
    'C10orf105'        [         0]
    'C10orf122'        [         0]
    'C10orf131'        [         0]
    'C11orf20'         [    0.2359]
    'C11orf21'         [         0]
    'C11orf34'         [         0]
    'C11orf86'         [         0]
    'C11orf90'         [         0]
    'C11orf91'         [         0]
    'C11orf93'         [         0]
    'C11orf95'         [         0]
    'C12orf70'         [         0]
    'C12orf73'         [         0]
    'C12orf75'         [         0]
    'C13orf38'         [         0]
    'C14orf176'        [         0]
    'C14orf38'         [         0]
    'C15orf61'         [         0]
    'C15orf62'         [         0]
    'C16orf52'         [         0]
    'C17orf105'        [         0]
    'C17orf106'        [         0]
    'C17orf107'        [         0]
    'C17orf50'         [    0.2376]
    'C17orf51'         [         0]
    'C17orf72'         [         0]
    'C17orf89'         [    0.1362]
    'C17orf96'         [         0]
    'C17orf97'         [    0.0063]
    'C17orf99'         [         0]
    'C18orf56'         [    0.1662]
    'C19orf20'         [    0.1029]
    'C19orf24'         [    0.0102]
    'C19orf38'         [         0]
    'C19orf60'         [    0.2171]
    'C19orf69'         [         0]
    'C19orf71'         [         0]
    'C19orf76'         [    0.1681]
    'C19orf77'         [         0]
    'C1orf185'         [         0]
    'C1orf204'         [    0.0071]
    'C1orf212'         [    0.1534]
    'C1orf223'         [         0]
    'C1orf228'         [         0]
    'C1orf229'         [    0.0122]
    'C1orf230'         [         0]
    'C1orf68'          [         0]
    'C1orf70'          [         0]
    'C20orf123'        [         0]
    'C20orf173'        [         0]
    'C20orf201'        [    0.1376]
    'C20orf202'        [         0]
    'C20orf203'        [         0]
    'C22orf26'         [    0.0084]
    'C22orf30'         [    0.1111]
    'C22orf41'         [         0]
    'C22orf46'         [         0]
    'C2CD4B'           [    0.0609]
    'C2CD4C'           [         0]
    'C2CD4D'           [         0]
    'C2orf27A'         [    0.0532]
    'C2orf27B'         [    0.0796]
    'C2orf72'          [         0]
    'C2orf74'          [         0]
    'C2orf81'          [         0]
    'C2orf82'          [    0.0054]
    'C3orf16'          [         0]
    'C3orf77'          [         0]
    'C3orf78'          [         0]
    'C4A'              [    0.1169]
    'C4B'              [    0.1169]
    'C4orf47'          [         0]
    'C4orf48'          [         0]
    'C4orf52'          [         0]
    'C5orf36'          [    0.2478]
    'C5orf47'          [         0]
    'C5orf52'          [         0]
    'C5orf60'          [         0]
    'C6orf103'         [         0]
    'C6orf132'         [         0]
    'C6orf141'         [         0]
    'C6orf163'         [         0]
    'C6orf52'          [         0]
    'C6orf94'          [         0]
    'C7orf71'          [         0]
    'C7orf72'          [         0]
    'C8orf30A'         [    0.0459]
    'C8orf48'          [         0]
    'C8orf55'          [    0.0845]
    'C8orf83'          [         0]
    'C9orf140'         [    0.2391]
    'C9orf144B'        [         0]
    'C9orf167'         [    0.1889]
    'C9orf169'         [         0]
    'C9orf57'          [         0]
    'CALHM3'           [         0]
    'CAPN14'           [         0]
    'CAPN8'            [         0]
    'CBWD3'            [    0.1385]
    'CBWD5'            [    0.2040]
    'CBY3'             [         0]
    'CCDC152'          [         0]
    'CCDC154'          [         0]
    'CCDC42B'          [         0]
    'CCDC79'           [         0]
    'CCDC85B'          [    0.1375]
    'CCDC85C'          [         0]
    'CCL3L1'           [    0.1110]
    'CCL3L3'           [    0.1110]
    'CCL4L1'           [    0.2322]
    'CCL4L2'           [    0.2322]
    'CD24'             [         0]
    'CDC42EP5'         [    0.0629]
    'CDHR4'            [    0.1483]
    'CDKN1C'           [    0.0925]
    'CDY1'             [         0]
    'CDY1B'            [         0]
    'CDY2A'            [         0]
    'CDY2B'            [         0]
    'CEBPA'            [    0.2397]
    'CFC1'             [    0.1337]
    'CFC1B'            [    0.1337]
    'CHADL'            [    0.0125]
    'CHIC1'            [    0.2330]
    'CISD3'            [         0]
    'CITED4'           [    0.0126]
    'CLDN24'           [         0]
    'CLEC2A'           [         0]
    'CPSF4L'           [         0]
    'CSAG2'            [         0]
    'CSAG3'            [         0]
    'CT45A1'           [    0.1024]
    'CT45A2'           [         0]
    'CT45A3'           [         0]
    'CT45A4'           [    0.0286]
    'CT45A6'           [         0]
    'CT47A1'           [    0.0019]
    'CT47A10'          [2.5995e-06]
    'CT47A11'          [2.5995e-06]
    'CT47A2'           [2.5995e-06]
    'CT47A3'           [2.5995e-06]
    'CT47A4'           [2.5995e-06]
    'CT47A5'           [2.5995e-06]
    'CT47A6'           [    0.0143]
    'CT47A7'           [         0]
    'CT47A8'           [2.5995e-06]
    'CT47A9'           [2.5995e-06]
    'CTAG1A'           [         0]
    'CTAG1B'           [         0]
    'CTAGE4'           [    0.1085]
    'CTF1'             [    0.2170]
    'CTRB1'            [    0.2351]
    'CTRB2'            [    0.2053]
    'CTU1'             [    0.1027]
    'CTXN2'            [         0]
    'CXorf30'          [         0]
    'CXorf49'          [         0]
    'CXorf49B'         [         0]
    'CXorf51'          [         0]
    'CXorf64'          [         0]
    'CYS1'             [    0.2022]
    'CYorf15A'         [    0.1560]
    'CYorf15B'         [    0.0595]
    'DACT2'            [         0]
    'DACT3'            [    0.1341]
    'DAZ1'             [         0]
    'DAZ2'             [    0.0080]
    'DAZ3'             [    0.0072]
    'DAZ4'             [    0.0057]
    'DDT'              [    0.2142]
    'DDX3Y'            [    0.2317]
    'DEFA1'            [    0.2000]
    'DEFA1B'           [    0.2000]
    'DEFB103A'         [         0]
    'DEFB103B'         [         0]
    'DEFB105A'         [    0.1010]
    'DEFB105B'         [    0.1010]
    'DEFB107A'         [    0.0480]
    'DEFB107B'         [    0.0480]
    'DEFB130'          [         0]
    'DEFB133'          [         0]
    'DKFZP781G0119'    [         0]
    'DMRTC1'           [    0.0949]
    'DMRTC1B'          [    0.0949]
    'DNAH12'           [    0.1432]
    'DNAH14'           [    0.0485]
    'DNAH6'            [    0.1042]
    'DOC2B'            [    0.0015]
    'DPCR1'            [    0.1916]
    'DTHD1'            [         0]
    'DUX4'             [         0]
    'EBF4'             [    0.0326]
    'EFCAB9'           [         0]
    'EFR3B'            [         0]
    'EIF1AY'           [    0.1667]
    'EIF3C'            [    0.0739]
    'EIF3CL'           [    0.0739]
    'ELFN1'            [    0.0186]
    'EML6'             [         0]
    'ENDOG'            [    0.2382]
    'EXOSC6'           [    0.0438]
    'EYS'              [    0.1835]
    'F8A1'             [         0]
    'F8A2'             [    0.0568]
    'F8A3'             [         0]
    'FAM149B1'         [         0]
    'FAM156A'          [         0]
    'FAM156B'          [         0]
    'FAM157A'          [         0]
    'FAM157B'          [         0]
    'FAM159B'          [         0]
    'FAM160A1'         [         0]
    'FAM163B'          [    0.1400]
    'FAM170B'          [         0]
    'FAM171A2'         [         0]
    'FAM178B'          [    0.1841]
    'FAM180B'          [         0]
    'FAM184B'          [         0]
    'FAM185A'          [         0]
    'FAM186A'          [         0]
    'FAM189A1'         [         0]
    'FAM194B'          [         0]
    'FAM196B'          [         0]
    'FAM198A'          [         0]
    'FAM200A'          [    0.1033]
    'FAM200B'          [         0]
    'FAM20C'           [    0.2291]
    'FAM22A'           [    0.2351]
    'FAM23A'           [    0.0439]
    'FAM25A'           [         0]
    'FAM25B'           [         0]
    'FAM25C'           [         0]
    'FAM25G'           [         0]
    'FAM38A'           [4.3357e-05]
    'FAM38B'           [    0.2063]
    'FAM47E'           [         0]
    'FAM59B'           [         0]
    'FAM69A'           [    0.2170]
    'FAM71E2'          [         0]
    'FAM75A1'          [    0.1570]
    'FAM75A2'          [    0.1570]
    'FAM75A5'          [    0.0452]
    'FAM75A7'          [    0.0452]
    'FAM90A10'         [         0]
    'FAM90A13'         [         0]
    'FAM90A14'         [         0]
    'FAM90A18'         [         0]
    'FAM90A19'         [         0]
    'FAM90A20'         [         0]
    'FAM90A5'          [         0]
    'FAM90A7'          [         0]
    'FAM90A8'          [         0]
    'FAM90A9'          [         0]
    'FBRSL1'           [         0]
    'FHAD1'            [         0]
    'FIGNL2'           [    0.1903]
    'FLJ25363'         [         0]
    'FLJ36031'         [    0.1142]
    'FLJ43859'         [    0.1013]
    'FLJ44082'         [    0.1176]
    'FLJ44606'         [         0]
    'FOXD4L2'          [         0]
    'FOXD4L4'          [         0]
    'FOXD4L6'          [    0.0808]
    'FOXI3'            [    0.0932]
    'FRAT1'            [    0.1594]
    'FRAT2'            [    0.1352]
    'FREM3'            [         0]
    'FRG2'             [    0.1023]
    'FRG2C'            [         0]
    'FSD1L'            [         0]
    'FSIP2'            [    0.2201]
    'GAGE12B'          [    0.0093]
    'GAGE12C'          [    0.0412]
    'GAGE12D'          [    0.0402]
    'GAGE12E'          [    0.0402]
    'GAGE12F'          [    0.0385]
    'GAGE12G'          [    0.0056]
    'GAGE12H'          [    0.0602]
    'GAGE12I'          [    0.1100]
    'GAGE12J'          [    0.2261]
    'GAGE2A'           [    0.2289]
    'GAGE2C'           [    0.2476]
    'GAGE2D'           [    0.2142]
    'GAGE4'            [    0.1100]
    'GAGE5'            [    0.1100]
    'GAGE6'            [         0]
    'GAGE7'            [    0.1100]
    'GATSL1'           [    0.0014]
    'GATSL2'           [    0.0750]
    'GCNT7'            [         0]
    'GDF1'             [    0.0537]
    'GFRA4'            [    0.1267]
    'GIYD1'            [    0.1629]
    'GIYD2'            [    0.1629]
    'GJD3'             [    0.1837]
    'GLYATL3'          [         0]
    'GOLGA6L1'         [    0.0184]
    'GOLGA6L10'        [    0.0114]
    'GOLGA6L6'         [    0.0089]
    'GOLGA6L9'         [         0]
    'GOLGA8A'          [    0.1510]
    'GOLGA8B'          [    0.1283]
    'GP1BB'            [    0.0151]
    'GPR144'           [         0]
    'GPR150'           [    0.2151]
    'GPR44'            [    0.2257]
    'GPR89C'           [         0]
    'GRAPL'            [         0]
    'GREB1L'           [         0]
    'GRID2IP'          [         0]
    'GRRP1'            [    0.0304]
    'GSC2'             [    0.1096]
    'GSTT2'            [    0.1889]
    'GSTT2B'           [    0.1480]
    'GTF2H2'           [    0.2298]
    'H2AFB1'           [    0.2195]
    'H2AFB2'           [         0]
    'H2AFB3'           [    0.2195]
    'H2BFM'            [    0.2404]
    'HBZ'              [    0.2418]
    'HEATR7A'          [    0.2353]
    'HES2'             [    0.2130]
    'HGC6.3'           [         0]
    'HHLA1'            [         0]
    'HIST2H2AA3'       [         0]
    'HIST2H2AA4'       [         0]
    'HIST2H3A'         [         0]
    'HIST2H3C'         [         0]
    'HIST2H4A'         [         0]
    'HIST2H4B'         [         0]
    'HMGXB3'           [         0]
    'HRK'              [3.0648e-04]
    'HRNBP3'           [         0]
    'HSBP1L1'          [         0]
    'HSFX1'            [         0]
    'HSFX2'            [         0]
    'HSFY1'            [         0]
    'HSFY2'            [         0]
    'HSPB6'            [    0.0770]
    'IFFO2'            [    0.0957]
    'IGFN1'            [    0.2372]
    'IKBKG'            [    0.2051]
    'IQCF5'            [         0]
    'IQCF6'            [         0]
    'IRGM'             [         0]
    'KBTBD11'          [    0.0493]
    'KBTBD13'          [    0.2363]
    'KCP'              [9.3511e-05]
    'KDM5D'            [    0.1856]
    'KIAA0040'         [         0]
    'KIAA1107'         [         0]
    'KIAA1239'         [         0]
    'KIAA1671'         [         0]
    'KIAA1731'         [    0.0062]
    'KILLIN'           [         0]
    'KISS1R'           [    0.1978]
    'KLF2'             [    0.2282]
    'KLHL29'           [         0]
    'KLHL33'           [         0]
    'KPNA7'            [         0]
    'KRTAP2-1'         [    0.0023]
    'KRTAP2-2'         [         0]
    'KRTAP2-4'         [    0.0256]
    'KRTAP20-3'        [         0]
    'KRTAP21-3'        [         0]
    'KRTAP22-2'        [         0]
    'KRTAP25-1'        [         0]
    'KRTAP7-1'         [         0]
    'LCE6A'            [         0]
    'LEUTX'            [         0]
    'LGALS7'           [    0.1356]
    'LIMS3'            [         0]
    'LIPM'             [    0.1162]
    'LIPT2'            [         0]
    'LOC100128071'     [         0]
    'LOC100128542'     [    0.0168]
    'LOC100130274'     [         0]
    'LOC100130933'     [         0]
    'LOC100131801'     [         0]
    'LOC100132247'     [    0.2142]
    'LOC100132963'     [         0]
    'LOC100133893'     [         0]
    'LOC100287428'     [         0]
    'LOC100287718'     [         0]
    'LOC100288797'     [         0]
    'LOC200030'        [    0.0399]
    'LOC221710'        [         0]
    'LOC283999'        [         0]
    'LOC339047'        [2.1631e-04]
    'LOC342346'        [         0]
    'LOC360030'        [         0]
    'LOC375190'        [         0]
    'LOC388588'        [         0]
    'LOC388946'        [         0]
    'LOC389333'        [         0]
    'LOC389493'        [         0]
    'LOC390595'        [         0]
    'LOC401097'        [         0]
    'LOC401387'        [         0]
    'LOC402778'        [         0]
    'LOC441056'        [         0]
    'LOC441294'        [    0.1258]
    'LOC441869'        [         0]
    'LOC642597'        [         0]
    'LOC643008'        [         0]
    'LOC643596'        [         0]
    'LOC643677'        [         0]
    'LOC644538'        [         0]
    'LOC646627'        [         0]
    'LOC646851'        [         0]
    'LOC647309'        [         0]
    'LOC653543'        [         0]
    'LOC653544'        [    0.0272]
    'LOC653545'        [    0.0272]
    'LOC653548'        [    0.0272]
    'LOC728392'        [         0]
    'LOC728410'        [    0.0306]
    'LOC729991'        [         0]
    'LOC730755'        [    0.0027]
    'LOR'              [    0.2241]
    'LOXHD1'           [         0]
    'LRRC10B'          [         0]
    'LRRC26'           [    0.0880]
    'LRRC37A'          [    0.1613]
    'LRRC69'           [         0]
    'LUZP6'            [         0]
    'LYL1'             [    0.2220]
    'MAFA'             [    0.1996]
    'MAGEA2'           [         0]
    'MAGEA2B'          [         0]
    'MAGEA9'           [    0.0630]
    'MAGEA9B'          [    0.0630]
    'MAGED4'           [1.5264e-04]
    'MAGED4B'          [2.5314e-04]
    'MAP6D1'           [    0.2115]
    'MARVELD1'         [         0]
    'MBD3L2'           [8.0226e-04]
    'MBD3L3'           [         0]
    'MBD3L4'           [         0]
    'MBD3L5'           [    0.0026]
    'MBOAT4'           [         0]
    'MESP1'            [    0.2387]
    'METRN'            [    0.2273]
    'METTL11B'         [         0]
    'MGC70857'         [    0.2123]
    'MMP23B'           [    0.0682]
    'MORN2'            [         0]
    'MRC1'             [    0.2067]
    'MRC1L1'           [    0.2067]
    'MRGPRG'           [         0]
    'MUC12'            [         0]
    'MYADML2'          [         0]
    'NACAD'            [9.7256e-05]
    'NAIP'             [    0.1526]
    'NANOS1'           [    0.2331]
    'NAT14'            [    0.0976]
    'NBPF11'           [    0.0399]
    'NBPF16'           [    0.2457]
    'NBPF4'            [5.7945e-04]
    'NBPF6'            [    0.0427]
    'NEURL1B'          [         0]
    'NHSL1'            [         0]
    'NKX1-2'           [         0]
    'NKX2-6'           [5.8010e-04]
    'NLGN4Y'           [    0.2438]
    'NOTO'             [         0]
    'NPIPL3'           [    0.1035]
    'NXF2'             [    0.1599]
    'NXF2B'            [    0.1599]
    'OLIG1'            [    0.1369]
    'ONECUT3'          [    0.0519]
    'OR2T29'           [    0.1966]
    'OR4C45'           [    0.0415]
    'OR4F16'           [         0]
    'OR4F29'           [         0]
    'OR4F3'            [         0]
    'OR6P1'            [8.1969e-04]
    'OST4'             [         0]
    'OTUD1'            [         0]
    'PABPC1L2A'        [    0.0692]
    'PABPC1L2B'        [    0.0064]
    'PABPC4L'          [    0.0191]
    'PALM3'            [         0]
    'PARG'             [    0.1360]
    'PATE3'            [         0]
    'PATE4'            [         0]
    'PATL2'            [         0]
    'PCDH11Y'          [    0.2338]
    'PCSK1N'           [    0.0497]
    'PET117'           [         0]
    'PGA4'             [         0]
    'PHGR1'            [         0]
    'PHOSPHO1'         [    0.2304]
    'PKD1L3'           [         0]
    'PL-5283'          [         0]
    'PLGLB1'           [    0.1676]
    'PLGLB2'           [    0.1676]
    'PNMA6A'           [         0]
    'PNRC2'            [    0.0116]
    'POLR2J3'          [    0.1511]
    'POM121L2'         [         0]
    'POTEB'            [    0.0982]
    'POTED'            [    0.2131]
    'PPIAL4A'          [    0.0722]
    'PPIAL4B'          [    0.0722]
    'PPIAL4C'          [    0.0041]
    'PPIAL4D'          [         0]
    'PPIAL4F'          [         0]
    'PPP1R3G'          [         0]
    'PRAMEF13'         [    0.2321]
    'PRAMEF15'         [         0]
    'PRAMEF16'         [    0.1986]
    'PRAMEF20'         [    0.0694]
    'PRAMEF21'         [    0.0694]
    'PRAMEF22'         [    0.2147]
    'PRAMEF3'          [    0.0653]
    'PRAMEF5'          [    0.1094]
    'PRAMEF6'          [    0.1768]
    'PRAMEF7'          [    0.1841]
    'PRAMEF8'          [    0.1236]
    'PRAMEF9'          [         0]
    'PRDM6'            [         0]
    'PRR18'            [    0.2187]
    'PRR20A'           [         0]
    'PRR20B'           [         0]
    'PRR20C'           [         0]
    'PRR20D'           [         0]
    'PRR20E'           [         0]
    'PRR24'            [         0]
    'PRRT4'            [         0]
    'PRSS41'           [    0.0336]
    'PRY'              [         0]
    'PRY2'             [         0]
    'PSMG4'            [         0]
    'PTGER1'           [    0.1511]
    'PTPN20A'          [    0.0771]
    'PTPN20B'          [    0.0771]
    'PTPRQ'            [         0]
    'R3HCC1'           [         0]
    'RAD21L1'          [         0]
    'RASA4'            [    0.0923]
    'RBM20'            [         0]
    'RBMXL3'           [7.3341e-04]
    'RBMY1A1'          [    0.0106]
    'RBMY1B'           [    0.0199]
    'RBMY1D'           [    0.0199]
    'RBMY1E'           [    0.0160]
    'RBMY1F'           [    0.0070]
    'RBMY1J'           [    0.0070]
    'RESP18'           [         0]
    'REXO1L1'          [    0.0861]
    'RFPL4A'           [2.9354e-04]
    'RFX8'             [         0]
    'RGPD1'            [    0.1200]
    'RGPD2'            [    0.1258]
    'RGPD5'            [    0.1522]
    'RGPD6'            [3.5091e-04]
    'RGSL1'            [         0]
    'RIMBP3'           [    0.2482]
    'RIMBP3B'          [    0.0172]
    'RIMBP3C'          [    0.0172]
    'RNF187'           [         0]
    'RNF222'           [         0]
    'RPS17'            [         0]
    'SAP25'            [         0]
    'SCGB3A1'          [    0.1855]
    'SCT'              [         0]
    'SCXA'             [         0]
    'SCXB'             [         0]
    'SDHAF1'           [    0.0576]
    'SERF1A'           [         0]
    'SERF1B'           [         0]
    'SETD1B'           [3.6335e-04]
    'SFRS13A'          [    0.0285]
    'SFT2D3'           [2.1918e-04]
    'SH3D20'           [    0.1061]
    'SHISA6'           [         0]
    'SHISA7'           [         0]
    'SHISA9'           [         0]
    'SLC15A5'          [         0]
    'SLC22A18AS'       [         0]
    'SLC22A24'         [    0.1925]
    'SLFN14'           [         0]
    'SMN1'             [    0.0562]
    'SMN2'             [    0.0551]
    'SP9'              [    0.0522]
    'SPACA5'           [    0.0730]
    'SPACA5B'          [    0.0730]
    'SPANXA1'          [         0]
    'SPANXA2'          [         0]
    'SPANXB1'          [         0]
    'SPANXB2'          [         0]
    'SPANXF1'          [         0]
    'SPANXN4'          [    0.2360]
    'SPATA24'          [         0]
    'SPATA3'           [         0]
    'SPDYE2'           [    0.0749]
    'SPDYE2L'          [    0.0749]
    'SPINT3'           [         0]
    'SPRN'             [    0.0791]
    'SRRM5'            [    0.0718]
    'SRY'              [    0.2140]
    'SSC5D'            [7.3246e-06]
    'SSX2'             [         0]
    'SSX2B'            [         0]
    'SSX4'             [    0.1364]
    'SSX4B'            [    0.1364]
    'STAG3L1'          [    0.0409]
    'STAG3L3'          [    0.2317]
    'STARD9'           [         0]
    'SULT1A3'          [    0.0022]
    'SULT1A4'          [    0.0022]
    'SYCE1L'           [         0]
    'TARM1'            [         0]
    'TBC1D3'           [    0.1067]
    'TBC1D3C'          [    0.0584]
    'TBC1D3F'          [    0.1067]
    'TBC1D3G'          [    0.1886]
    'TBC1D3H'          [    0.0027]
    'TBL1Y'            [    0.2386]
    'TCEB3CL'          [    0.2047]
    'TCF15'            [    0.1804]
    'TCTEX1D4'         [    0.2339]
    'TDRD12'           [         0]
    'TEX28'            [         0]
    'TGIF2LY'          [    0.2463]
    'TIGD1'            [         0]
    'TLCD2'            [         0]
    'TMEM114'          [         0]
    'TMEM121'          [    0.2236]
    'TMEM129'          [    0.2049]
    'TMEM132C'         [    0.0495]
    'TMEM151B'         [         0]
    'TMEM158'          [    0.0250]
    'TMEM160'          [    0.1841]
    'TMEM194B'         [         0]
    'TMEM212'          [         0]
    'TMEM229A'         [         0]
    'TMEM232'          [         0]
    'TMEM233'          [         0]
    'TMEM88B'          [         0]
    'TMPRSS11BNL'      [         0]
    'TMSB4Y'           [    0.2367]
    'TOMM6'            [         0]
    'TP53TG3'          [         0]
    'TP53TG3B'         [         0]
    'TRIM43B'          [         0]
    'TRIM49L'          [    0.0110]
    'TRIM64'           [         0]
    'TRIM64B'          [         0]
    'TRIM66'           [         0]
    'TRIM77'           [         0]
    'TRNP1'            [    0.0013]
    'TSPY1'            [    0.0769]
    'TSPY2'            [    0.0899]
    'TSPY3'            [    0.0158]
    'TSPY4'            [    0.0262]
    'TSTD1'            [         0]
    'TTC28'            [         0]
    'TUSC1'            [    0.1037]
    'TXNRD3'           [         0]
    'UBE2QL1'          [         0]
    'UNC80'            [    0.0865]
    'UNCX'             [    0.2380]
    'UPF0639'          [         0]
    'UPK3BL'           [         0]
    'URB1'             [         0]
    'USP17'            [    0.0051]
    'USP27X'           [    0.2400]
    'USP9Y'            [    0.2191]
    'UTF1'             [    0.0799]
    'UTY'              [    0.1931]
    'VCY'              [         0]
    'VCY1B'            [         0]
    'VSIG10L'          [         0]
    'VSTM2B'           [         0]
    'VWA5B1'           [         0]
    'VWA5B2'           [    0.0019]
    'VWDE'             [         0]
    'WASH1'            [    0.1712]
    'WDFY4'            [         0]
    'WDR87'            [         0]
    'XAGE1A'           [         0]
    'XAGE1B'           [         0]
    'XAGE1C'           [         0]
    'XAGE1D'           [         0]
    'XAGE1E'           [         0]
    'XAGE2'            [         0]
    'XAGE2B'           [         0]
    'XKRY'             [         0]
    'XKRY2'            [         0]
    'ZAR1L'            [         0]
    'ZBED3'            [    0.0113]
    'ZBED5'            [         0]
    'ZBED6'            [         0]
    'ZBTB42'           [         0]
    'ZBTB8B'           [         0]
    'ZFP62'            [    0.0212]
    'ZFP92'            [    0.0498]
    'ZFY'              [    0.2421]
    'ZG16'             [         0]
    'ZNF26'            [         0]
    'ZNF389'           [    0.0998]
    'ZNF444'           [    0.2185]
    'ZNF469'           [         0]
    'ZNF541'           [         0]
    'ZNF579'           [    0.1847]
    'ZNF703'           [    0.2361]
    'ZNF705D'          [    0.2006]
    'ZNF705G'          [         0]
    'ZNF717'           [    0.0025]
    'ZNF727'           [    0.2308]
    'ZNF771'           [    0.1678]
    'ZNF826'           [         0]
    'ZNF837'           [    0.0230]
    'ZNF84'            [         0]
    'ZNF843'           [         0]
    'ZNF853'           [    0.0031]
    'ZNF879'           [    0.1028]
    'ZSWIM6'           [         0]
    'ZYG11A'           [         0]

The above 769 genes have very low coverage and are being omitted.
Loading gene list... 

The following 769 genes are being omittted because coverage is zero/redacted:
    'A2LD1'
    'AG2'
    'AGBL3'
    'AMELY'
    'AMH'
    'AMY1A'
    'AMY1B'
    'AMY1C'
    'ANKRD18A'
    'ANKRD20A2'
    'ANKRD20A3'
    'ANKRD31'
    'ANKRD33B'
    'ANKRD34C'
    'ANKRD43'
    'ANKRD9'
    'ANXA8'
    'ANXA8L1'
    'ANXA8L2'
    'APLN'
    'ARHGAP23'
    'ARHGAP40'
    'ARHGAP42'
    'ARHGEF33'
    'ARL17A'
    'ARL17B'
    'ARL5C'
    'ASAH2B'
    'ASCL2'
    'ATXN1L'
    'ATXN7L1'
    'ATXN7L3B'
    'B3GALT6'
    'BCORL2'
    'BEAN'
    'BET3L'
    'BHLHA15'
    'BHLHA9'
    'BOLA2'
    'BOLA2B'
    'BOP1'
    'BPY2'
    'BPY2B'
    'BPY2C'
    'BSPH1'
    'BTBD18'
    'BTBD19'
    'C10orf105'
    'C10orf122'
    'C10orf131'
    'C11orf20'
    'C11orf21'
    'C11orf34'
    'C11orf86'
    'C11orf90'
    'C11orf91'
    'C11orf93'
    'C11orf95'
    'C12orf70'
    'C12orf73'
    'C12orf75'
    'C13orf38'
    'C14orf176'
    'C14orf38'
    'C15orf61'
    'C15orf62'
    'C16orf52'
    'C17orf105'
    'C17orf106'
    'C17orf107'
    'C17orf50'
    'C17orf51'
    'C17orf72'
    'C17orf89'
    'C17orf96'
    'C17orf97'
    'C17orf99'
    'C18orf56'
    'C19orf20'
    'C19orf24'
    'C19orf38'
    'C19orf60'
    'C19orf69'
    'C19orf71'
    'C19orf76'
    'C19orf77'
    'C1orf185'
    'C1orf204'
    'C1orf212'
    'C1orf223'
    'C1orf228'
    'C1orf229'
    'C1orf230'
    'C1orf68'
    'C1orf70'
    'C20orf123'
    'C20orf173'
    'C20orf201'
    'C20orf202'
    'C20orf203'
    'C22orf26'
    'C22orf30'
    'C22orf41'
    'C22orf46'
    'C2CD4B'
    'C2CD4C'
    'C2CD4D'
    'C2orf27A'
    'C2orf27B'
    'C2orf72'
    'C2orf74'
    'C2orf81'
    'C2orf82'
    'C3orf16'
    'C3orf77'
    'C3orf78'
    'C4A'
    'C4B'
    'C4orf47'
    'C4orf48'
    'C4orf52'
    'C5orf36'
    'C5orf47'
    'C5orf52'
    'C5orf60'
    'C6orf103'
    'C6orf132'
    'C6orf141'
    'C6orf163'
    'C6orf52'
    'C6orf94'
    'C7orf71'
    'C7orf72'
    'C8orf30A'
    'C8orf48'
    'C8orf55'
    'C8orf83'
    'C9orf140'
    'C9orf144B'
    'C9orf167'
    'C9orf169'
    'C9orf57'
    'CALHM3'
    'CAPN14'
    'CAPN8'
    'CBWD3'
    'CBWD5'
    'CBY3'
    'CCDC152'
    'CCDC154'
    'CCDC42B'
    'CCDC79'
    'CCDC85B'
    'CCDC85C'
    'CCL3L1'
    'CCL3L3'
    'CCL4L1'
    'CCL4L2'
    'CD24'
    'CDC42EP5'
    'CDHR4'
    'CDKN1C'
    'CDY1'
    'CDY1B'
    'CDY2A'
    'CDY2B'
    'CEBPA'
    'CFC1'
    'CFC1B'
    'CHADL'
    'CHIC1'
    'CISD3'
    'CITED4'
    'CLDN24'
    'CLEC2A'
    'CPSF4L'
    'CSAG2'
    'CSAG3'
    'CT45A1'
    'CT45A2'
    'CT45A3'
    'CT45A4'
    'CT45A6'
    'CT47A1'
    'CT47A10'
    'CT47A11'
    'CT47A2'
    'CT47A3'
    'CT47A4'
    'CT47A5'
    'CT47A6'
    'CT47A7'
    'CT47A8'
    'CT47A9'
    'CTAG1A'
    'CTAG1B'
    'CTAGE4'
    'CTF1'
    'CTRB1'
    'CTRB2'
    'CTU1'
    'CTXN2'
    'CXorf30'
    'CXorf49'
    'CXorf49B'
    'CXorf51'
    'CXorf64'
    'CYS1'
    'CYorf15A'
    'CYorf15B'
    'DACT2'
    'DACT3'
    'DAZ1'
    'DAZ2'
    'DAZ3'
    'DAZ4'
    'DDT'
    'DDX3Y'
    'DEFA1'
    'DEFA1B'
    'DEFB103A'
    'DEFB103B'
    'DEFB105A'
    'DEFB105B'
    'DEFB107A'
    'DEFB107B'
    'DEFB130'
    'DEFB133'
    'DKFZP781G0119'
    'DMRTC1'
    'DMRTC1B'
    'DNAH12'
    'DNAH14'
    'DNAH6'
    'DOC2B'
    'DPCR1'
    'DTHD1'
    'DUX4'
    'EBF4'
    'EFCAB9'
    'EFR3B'
    'EIF1AY'
    'EIF3C'
    'EIF3CL'
    'ELFN1'
    'EML6'
    'ENDOG'
    'EXOSC6'
    'EYS'
    'F8A1'
    'F8A2'
    'F8A3'
    'FAM149B1'
    'FAM156A'
    'FAM156B'
    'FAM157A'
    'FAM157B'
    'FAM159B'
    'FAM160A1'
    'FAM163B'
    'FAM170B'
    'FAM171A2'
    'FAM178B'
    'FAM180B'
    'FAM184B'
    'FAM185A'
    'FAM186A'
    'FAM189A1'
    'FAM194B'
    'FAM196B'
    'FAM198A'
    'FAM200A'
    'FAM200B'
    'FAM20C'
    'FAM22A'
    'FAM23A'
    'FAM25A'
    'FAM25B'
    'FAM25C'
    'FAM25G'
    'FAM38A'
    'FAM38B'
    'FAM47E'
    'FAM59B'
    'FAM69A'
    'FAM71E2'
    'FAM75A1'
    'FAM75A2'
    'FAM75A5'
    'FAM75A7'
    'FAM90A10'
    'FAM90A13'
    'FAM90A14'
    'FAM90A18'
    'FAM90A19'
    'FAM90A20'
    'FAM90A5'
    'FAM90A7'
    'FAM90A8'
    'FAM90A9'
    'FBRSL1'
    'FHAD1'
    'FIGNL2'
    'FLJ25363'
    'FLJ36031'
    'FLJ43859'
    'FLJ44082'
    'FLJ44606'
    'FOXD4L2'
    'FOXD4L4'
    'FOXD4L6'
    'FOXI3'
    'FRAT1'
    'FRAT2'
    'FREM3'
    'FRG2'
    'FRG2C'
    'FSD1L'
    'FSIP2'
    'GAGE12B'
    'GAGE12C'
    'GAGE12D'
    'GAGE12E'
    'GAGE12F'
    'GAGE12G'
    'GAGE12H'
    'GAGE12I'
    'GAGE12J'
    'GAGE2A'
    'GAGE2C'
    'GAGE2D'
    'GAGE4'
    'GAGE5'
    'GAGE6'
    'GAGE7'
    'GATSL1'
    'GATSL2'
    'GCNT7'
    'GDF1'
    'GFRA4'
    'GIYD1'
    'GIYD2'
    'GJD3'
    'GLYATL3'
    'GOLGA6L1'
    'GOLGA6L10'
    'GOLGA6L6'
    'GOLGA6L9'
    'GOLGA8A'
    'GOLGA8B'
    'GP1BB'
    'GPR144'
    'GPR150'
    'GPR44'
    'GPR89C'
    'GRAPL'
    'GREB1L'
    'GRID2IP'
    'GRRP1'
    'GSC2'
    'GSTT2'
    'GSTT2B'
    'GTF2H2'
    'H2AFB1'
    'H2AFB2'
    'H2AFB3'
    'H2BFM'
    'HBZ'
    'HEATR7A'
    'HES2'
    'HGC6.3'
    'HHLA1'
    'HIST2H2AA3'
    'HIST2H2AA4'
    'HIST2H3A'
    'HIST2H3C'
    'HIST2H4A'
    'HIST2H4B'
    'HMGXB3'
    'HRK'
    'HRNBP3'
    'HSBP1L1'
    'HSFX1'
    'HSFX2'
    'HSFY1'
    'HSFY2'
    'HSPB6'
    'IFFO2'
    'IGFN1'
    'IKBKG'
    'IQCF5'
    'IQCF6'
    'IRGM'
    'KBTBD11'
    'KBTBD13'
    'KCP'
    'KDM5D'
    'KIAA0040'
    'KIAA1107'
    'KIAA1239'
    'KIAA1671'
    'KIAA1731'
    'KILLIN'
    'KISS1R'
    'KLF2'
    'KLHL29'
    'KLHL33'
    'KPNA7'
    'KRTAP2-1'
    'KRTAP2-2'
    'KRTAP2-4'
    'KRTAP20-3'
    'KRTAP21-3'
    'KRTAP22-2'
    'KRTAP25-1'
    'KRTAP7-1'
    'LCE6A'
    'LEUTX'
    'LGALS7'
    'LIMS3'
    'LIPM'
    'LIPT2'
    'LOC100128071'
    'LOC100128542'
    'LOC100130274'
    'LOC100130933'
    'LOC100131801'
    'LOC100132247'
    'LOC100132963'
    'LOC100133893'
    'LOC100287428'
    'LOC100287718'
    'LOC100288797'
    'LOC200030'
    'LOC221710'
    'LOC283999'
    'LOC339047'
    'LOC342346'
    'LOC360030'
    'LOC375190'
    'LOC388588'
    'LOC388946'
    'LOC389333'
    'LOC389493'
    'LOC390595'
    'LOC401097'
    'LOC401387'
    'LOC402778'
    'LOC441056'
    'LOC441294'
    'LOC441869'
    'LOC642597'
    'LOC643008'
    'LOC643596'
    'LOC643677'
    'LOC644538'
    'LOC646627'
    'LOC646851'
    'LOC647309'
    'LOC653543'
    'LOC653544'
    'LOC653545'
    'LOC653548'
    'LOC728392'
    'LOC728410'
    'LOC729991'
    'LOC730755'
    'LOR'
    'LOXHD1'
    'LRRC10B'
    'LRRC26'
    'LRRC37A'
    'LRRC69'
    'LUZP6'
    'LYL1'
    'MAFA'
    'MAGEA2'
    'MAGEA2B'
    'MAGEA9'
    'MAGEA9B'
    'MAGED4'
    'MAGED4B'
    'MAP6D1'
    'MARVELD1'
    'MBD3L2'
    'MBD3L3'
    'MBD3L4'
    'MBD3L5'
    'MBOAT4'
    'MESP1'
    'METRN'
    'METTL11B'
    'MGC70857'
    'MMP23B'
    'MORN2'
    'MRC1'
    'MRC1L1'
    'MRGPRG'
    'MUC12'
    'MYADML2'
    'NACAD'
    'NAIP'
    'NANOS1'
    'NAT14'
    'NBPF11'
    'NBPF16'
    'NBPF4'
    'NBPF6'
    'NEURL1B'
    'NHSL1'
    'NKX1-2'
    'NKX2-6'
    'NLGN4Y'
    'NOTO'
    'NPIPL3'
    'NXF2'
    'NXF2B'
    'OLIG1'
    'ONECUT3'
    'OR2T29'
    'OR4C45'
    'OR4F16'
    'OR4F29'
    'OR4F3'
    'OR6P1'
    'OST4'
    'OTUD1'
    'PABPC1L2A'
    'PABPC1L2B'
    'PABPC4L'
    'PALM3'
    'PARG'
    'PATE3'
    'PATE4'
    'PATL2'
    'PCDH11Y'
    'PCSK1N'
    'PET117'
    'PGA4'
    'PHGR1'
    'PHOSPHO1'
    'PKD1L3'
    'PL-5283'
    'PLGLB1'
    'PLGLB2'
    'PNMA6A'
    'PNRC2'
    'POLR2J3'
    'POM121L2'
    'POTEB'
    'POTED'
    'PPIAL4A'
    'PPIAL4B'
    'PPIAL4C'
    'PPIAL4D'
    'PPIAL4F'
    'PPP1R3G'
    'PRAMEF13'
    'PRAMEF15'
    'PRAMEF16'
    'PRAMEF20'
    'PRAMEF21'
    'PRAMEF22'
    'PRAMEF3'
    'PRAMEF5'
    'PRAMEF6'
    'PRAMEF7'
    'PRAMEF8'
    'PRAMEF9'
    'PRDM6'
    'PRR18'
    'PRR20A'
    'PRR20B'
    'PRR20C'
    'PRR20D'
    'PRR20E'
    'PRR24'
    'PRRT4'
    'PRSS41'
    'PRY'
    'PRY2'
    'PSMG4'
    'PTGER1'
    'PTPN20A'
    'PTPN20B'
    'PTPRQ'
    'R3HCC1'
    'RAD21L1'
    'RASA4'
    'RBM20'
    'RBMXL3'
    'RBMY1A1'
    'RBMY1B'
    'RBMY1D'
    'RBMY1E'
    'RBMY1F'
    'RBMY1J'
    'RESP18'
    'REXO1L1'
    'RFPL4A'
    'RFX8'
    'RGPD1'
    'RGPD2'
    'RGPD5'
    'RGPD6'
    'RGSL1'
    'RIMBP3'
    'RIMBP3B'
    'RIMBP3C'
    'RNF187'
    'RNF222'
    'RPS17'
    'SAP25'
    'SCGB3A1'
    'SCT'
    'SCXA'
    'SCXB'
    'SDHAF1'
    'SERF1A'
    'SERF1B'
    'SETD1B'
    'SFRS13A'
    'SFT2D3'
    'SH3D20'
    'SHISA6'
    'SHISA7'
    'SHISA9'
    'SLC15A5'
    'SLC22A18AS'
    'SLC22A24'
    'SLFN14'
    'SMN1'
    'SMN2'
    'SP9'
    'SPACA5'
    'SPACA5B'
    'SPANXA1'
    'SPANXA2'
    'SPANXB1'
    'SPANXB2'
    'SPANXF1'
    'SPANXN4'
    'SPATA24'
    'SPATA3'
    'SPDYE2'
    'SPDYE2L'
    'SPINT3'
    'SPRN'
    'SRRM5'
    'SRY'
    'SSC5D'
    'SSX2'
    'SSX2B'
    'SSX4'
    'SSX4B'
    'STAG3L1'
    'STAG3L3'
    'STARD9'
    'SULT1A3'
    'SULT1A4'
    'SYCE1L'
    'TARM1'
    'TBC1D3'
    'TBC1D3C'
    'TBC1D3F'
    'TBC1D3G'
    'TBC1D3H'
    'TBL1Y'
    'TCEB3CL'
    'TCF15'
    'TCTEX1D4'
    'TDRD12'
    'TEX28'
    'TGIF2LY'
    'TIGD1'
    'TLCD2'
    'TMEM114'
    'TMEM121'
    'TMEM129'
    'TMEM132C'
    'TMEM151B'
    'TMEM158'
    'TMEM160'
    'TMEM194B'
    'TMEM212'
    'TMEM229A'
    'TMEM232'
    'TMEM233'
    'TMEM88B'
    'TMPRSS11BNL'
    'TMSB4Y'
    'TOMM6'
    'TP53TG3'
    'TP53TG3B'
    'TRIM43B'
    'TRIM49L'
    'TRIM64'
    'TRIM64B'
    'TRIM66'
    'TRIM77'
    'TRNP1'
    'TSPY1'
    'TSPY2'
    'TSPY3'
    'TSPY4'
    'TSTD1'
    'TTC28'
    'TUSC1'
    'TXNRD3'
    'UBE2QL1'
    'UNC80'
    'UNCX'
    'UPF0639'
    'UPK3BL'
    'URB1'
    'USP17'
    'USP27X'
    'USP9Y'
    'UTF1'
    'UTY'
    'VCY'
    'VCY1B'
    'VSIG10L'
    'VSTM2B'
    'VWA5B1'
    'VWA5B2'
    'VWDE'
    'WASH1'
    'WDFY4'
    'WDR87'
    'XAGE1A'
    'XAGE1B'
    'XAGE1C'
    'XAGE1D'
    'XAGE1E'
    'XAGE2'
    'XAGE2B'
    'XKRY'
    'XKRY2'
    'ZAR1L'
    'ZBED3'
    'ZBED5'
    'ZBED6'
    'ZBTB42'
    'ZBTB8B'
    'ZFP62'
    'ZFP92'
    'ZFY'
    'ZG16'
    'ZNF26'
    'ZNF389'
    'ZNF444'
    'ZNF469'
    'ZNF541'
    'ZNF579'
    'ZNF703'
    'ZNF705D'
    'ZNF705G'
    'ZNF717'
    'ZNF727'
    'ZNF771'
    'ZNF826'
    'ZNF837'
    'ZNF84'
    'ZNF843'
    'ZNF853'
    'ZNF879'
    'ZSWIM6'
    'ZYG11A'

Loading patient list... 
Loading categories... 
Loading mutations... 
Assigning mutations to categories...
Designated 3 double-null mutations.
Removed assignments of their 3 partner-null mutations; these will be omitted from analysis.

                              0     1     2     3     4     5  6      TOTAL  
           Frame_Shift_Del    1     0     0     0     0   329  0        330  
           Frame_Shift_Ins    0     0     0     0     0   131  0        131  
              In_Frame_Del    0     0     0     0     0   130  0        130  
              In_Frame_Ins    0     0     0     0     0    48  0         48  
                  Missense    0     0     1     0     0     2  0          3  
         Missense_Mutation    0   824  1043   927  1666     0  0       4460  
         Nonsense_Mutation    1     0     0     0     0   199  2        202  
          Nonstop_Mutation    0     0     0     0     0    10  0         10  
                    Silent    0   384   638   332   306     0  0       1660  
               Splice_Site    1     0     0     0     0   152  1        154  
    Translation_Start_Site    0     2     1     0     4     5  0         12  

                     TOTAL    3  1210  1683  1259  1976  1006  3       7140  

0 unassigned   
1 *CpG->T      
2 *Cp(A/C/T)->T
3 A->G         
4 transver     
5 indel+null   
6 double_null  
Mutations not in gene set:
         ANKRD19: [1]
          ARL17A: [1]
         ATXN7L1: [1]
           BOLA2: [1]
        C14orf48: [1]
        C15orf37: [1]
        C17orf97: [1]
        C19orf34: [1]
        C19orf60: [1]
             C4A: [1]
          CDC14C: [1]
         CROCCL2: [1]
           CTSL3: [1]
        CYP2D7P1: [1]
           DDX3Y: [1]
         DHX40P1: [1]
           DNAH6: [1]
           DPCR1: [1]
       DPY19L2P1: [1]
       DPY19L2P2: [1]
          EIF3CL: [1]
         FAM157A: [1]
          FAM38A: [1]
        FLJ40504: [1]
          GAGE2A: [1]
            GK3P: [1]
        GOLGA8DP: [1]
         GOLGA8E: [1]
          GUSBL2: [1]
             HBZ: [1]
         HEATR7A: [1]
        HLA-DQB2: [1]
       HNRNPA3P1: [1]
           HSPA7: [1]
           IGFN1: [1]
    LOC100131496: [1]
    LOC100133957: [1]
       LOC168474: [1]
       LOC220429: [1]
       LOC285501: [1]
       LOC387646: [1]
       LOC644165: [1]
       LOC644936: [1]
       LOC645166: [1]
       LOC645332: [1]
       LOC647859: [1]
       LOC728989: [1]
            MAFA: [1]
           MESP1: [1]
           METRN: [1]
          MST1P2: [1]
            NAIP: [1]
           NAPSB: [1]
           NCF1B: [1]
          NLGN4Y: [1]
          OR2M1P: [1]
          OR4N3P: [1]
         PCDHB18: [1]
          PDXDC2: [1]
          PTENP1: [1]
           RGPD1: [1]
       RPL23AP32: [1]
         RPLP0P2: [1]
          SDHAP3: [1]
        SLC7A5P2: [1]
         TMEM160: [1]
        TMEM229A: [1]
         TMEM88B: [1]
           UNC80: [1]
           USP9Y: [1]
          ZNF727: [1]
        ADAM21P1: [2]
       ANKRD20A3: [2]
            BCL8: [2]
        C11orf95: [2]
       C20orf191: [2]
       LOC283922: [2]
          OR2T29: [2]
          RIMBP3: [2]
           TUSC1: [2]
      GTF2IRD2P1: [3]
       LOC647288: [3]
        LYPLA2P1: [3]
            PARG: [3]
          RRN3P1: [3]
            TRY6: [3]
           DDX12: [4]
        FLJ43950: [4]
           GPR44: [4]
           HLA-J: [4]
           RGPD5: [4]
          SDHAP1: [4]
          FAM86D: [5]
       GOLGA6L10: [5]
    LOC100288778: [5]
       LOC642846: [5]
         PI4KAP2: [5]
         RPSAP58: [5]
         DDX11L2: [6]
           ESPNP: [6]
       HSD17B7P2: [6]
        RPL13AP6: [6]
           ADAM6: [7]
       LOC401010: [7]
       LOC653544: [8]
          MST1P9: [8]
        SLC6A10P: [9]
          WASH3P: [10]
          SDHAP2: [11]
       LOC442421: [12]
       LOC645752: [12]
       RPL13AP20: [12]
          WASH2P: [13]
          TUBBP5: [24]
           FRG1B: [54]
         Unknown: [97]
       ----TOTAL: [469]
Categories not in categ set:
          NaN: [3]
    ----TOTAL: [3]
Mutations not in categ set:
         ABL2: [1]
        ADAM6: [1]
         PTEN: [1]
    ----TOTAL: [3]

Mutations in this patient+gene+categ set: 6669/7140
	0 mutations not in patient set
	469 mutations not in gene set
	3 mutations not in categ set
		(Note: at least 3 of these are excluded because they are partners to double-nulls.)
Ignoring 0 flank indels

Building coverage table...
Building mutation tables

All data loaded
Finding number of unique sites, unique patients: 1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 
Projection mode warning: n subtotals in output table still reflect total mutation counts, not # mutated patients

Estimated nonsilent background mutation rates

            *CpG->T   1.49e-06    1.5/Mb  (relative = 2.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   1.80e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   1.64e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.77e-08    0.1/Mb  (relative = 0.18)
        double_null   2.11e-10    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5


Estimated SAMPLE-SPECIFIC nonsilent background mutation rates

THCA-BJ-A0YZ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.76e-07    0.5/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   3.65e-07    0.4/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z0-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.10)
        double_null   3.33e-08    0.0/Mb  (relative = 0.03)
              Total   9.65e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z2-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.30e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.56)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z3-TP
            *CpG->T   2.50e-06    2.5/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.43e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z5-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.66e-07    0.3/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0Z9-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   3.00e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.66e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZA-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.84)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZB-TP
            *CpG->T   5.39e-06    5.4/Mb  (relative = 2.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-07    0.7/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   6.83e-07    0.7/Mb  (relative = 0.38)  expected NS/S ratio = 2.3
           transver   6.35e-07    0.6/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.81e-06    1.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZC-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.1
         indel+null   3.41e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZE-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.65e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   6.64e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   9.96e-08    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.65e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZF-TP
            *CpG->T   2.94e-06    2.9/Mb  (relative = 3.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.36e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   4.06e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   2.32e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.61e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZG-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.63e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   1.35e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   1.32e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.31e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZH-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.87e-07    0.6/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.09e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.34e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A0ZJ-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 8.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.66e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Y-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   3.13e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.74e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.26e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A18Z-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   5.38e-07    0.5/Mb  (relative = 0.97)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.56e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A190-TP
            *CpG->T   2.57e-06    2.6/Mb  (relative = 5.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.1
         indel+null   1.71e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.80e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A191-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.99e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   6.80e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.78e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A192-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 5.41)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.1
         indel+null   6.92e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.42e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28R-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28S-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 2.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   2.22e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   3.22e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.86e-07    0.3/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.58e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28T-TP
            *CpG->T   5.99e-07    0.6/Mb  (relative = 5.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 1.36)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28V-TP
            *CpG->T   2.53e-06    2.5/Mb  (relative = 3.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.07e-07    0.2/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.60e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28X-TP
            *CpG->T   5.81e-06    5.8/Mb  (relative = 6.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   3.33e-08    0.0/Mb  (relative = 0.04)  expected NS/S ratio = 5.0
         indel+null   2.66e-07    0.3/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A28Z-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A290-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   3.02e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N7-TP
            *CpG->T   6.11e-07    0.6/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.04e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2N9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   6.81e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.41e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2NA-TP
            *CpG->T   4.54e-06    4.5/Mb  (relative = 4.48)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.94e-07    0.7/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.79e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.01e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A2P4-TP
            *CpG->T   3.09e-06    3.1/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3EZ-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.70e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3F0-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 1.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.51e-07    0.5/Mb  (relative = 1.10)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.10e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PR-TP
            *CpG->T   3.63e-06    3.6/Mb  (relative = 5.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.04e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PT-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   2.00e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.35e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-BJ-A3PU-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   3.06e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.81e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A13K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.66e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.67e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A27D-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3MD-TP
            *CpG->T   5.85e-07    0.6/Mb  (relative = 0.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.30e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-CE-A3ME-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.38e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0XZ-TP
            *CpG->T   2.34e-06    2.3/Mb  (relative = 2.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   3.41e-07    0.3/Mb  (relative = 0.39)  expected NS/S ratio = 2.3
           transver   3.99e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.04)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.65e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y2-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.32e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A0Y3-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.37e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.79e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.31e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A2OL-TP
            *CpG->T   6.19e-07    0.6/Mb  (relative = 1.40)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.43e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DE-A3KN-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 3.93)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.01e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13L-TP
            *CpG->T   3.80e-06    3.8/Mb  (relative = 3.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.84e-07    0.7/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   4.82e-07    0.5/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   2.06e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13M-TP
            *CpG->T   2.41e-06    2.4/Mb  (relative = 7.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   3.35e-08    0.0/Mb  (relative = 0.10)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.69e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13P-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 1.98)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.92e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   2.72e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   9.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.98e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13R-TP
            *CpG->T   3.59e-06    3.6/Mb  (relative = 7.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.01e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13S-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.27e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.62e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.30e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13T-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.32e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.32e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.38e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13V-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 8.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   9.97e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.99e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13W-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.39e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.32e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A13X-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.92e-07    0.6/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.69e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.72e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QD-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   6.91e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   6.91e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.49e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QE-TP
            *CpG->T   1.94e-06    1.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.83e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.43e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.28e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QF-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.60e-08    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QG-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 2.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QH-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 1.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.36e-07    0.5/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   6.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.59e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QI-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 5.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   6.94e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QL-TP
            *CpG->T   3.24e-06    3.2/Mb  (relative = 5.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QM-TP
            *CpG->T   6.49e-07    0.6/Mb  (relative = 1.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QN-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   6.87e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.44e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QO-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.42e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.73e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A1QQ-TP
            *CpG->T   6.33e-07    0.6/Mb  (relative = 1.67)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.64)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.78e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PN-TP
            *CpG->T   6.50e-07    0.7/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.88e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.6
               A->G   7.48e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.4
           transver   2.89e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 5.0
         indel+null   3.61e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.98e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PP-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   6.80e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.73e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PR-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 1.49)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.72e-07    0.2/Mb  (relative = 0.42)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.14e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PS-TP
            *CpG->T   6.02e-07    0.6/Mb  (relative = 2.23)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.69e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PT-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.09e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PU-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 3.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.98e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.09e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PW-TP
            *CpG->T   6.52e-07    0.7/Mb  (relative = 1.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   7.08e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.75e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.24e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2PZ-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.46e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.11e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q0-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 3.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.23)  expected NS/S ratio = 1.7
               A->G   3.47e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   2.71e-07    0.3/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.83e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q1-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q2-TP
            *CpG->T   1.30e-06    1.3/Mb  (relative = 3.39)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   1.74e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.1
         indel+null   1.04e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.82e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.38e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.45e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.42e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q5-TP
            *CpG->T   6.21e-07    0.6/Mb  (relative = 1.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.88)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.42e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.73e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q7-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.68)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.46)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.38e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q8-TP
            *CpG->T   6.17e-07    0.6/Mb  (relative = 1.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.09e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2Q9-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.82)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.25e-07    0.6/Mb  (relative = 0.92)  expected NS/S ratio = 2.3
           transver   1.36e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.82e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QA-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   6.76e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.59e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.16e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   3.23e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   1.44e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.46e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A2QC-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.47e-07    0.4/Mb  (relative = 0.83)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.42e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UK-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.66e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 7.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.45e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.39e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.69e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UN-TP
            *CpG->T   2.91e-06    2.9/Mb  (relative = 2.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.82e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   3.97e-07    0.4/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.09e-06    1.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UO-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.30)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   3.02e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UP-TP
            *CpG->T   5.91e-06    5.9/Mb  (relative = 6.32)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.35e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UQ-TP
            *CpG->T   2.99e-06    3.0/Mb  (relative = 4.24)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.43e-07    0.4/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UR-TP
            *CpG->T   3.50e-06    3.5/Mb  (relative = 7.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.4
           transver   9.97e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.98e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3US-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 4.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.72e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UT-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.68e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UU-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UV-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 1.20)  expected NS/S ratio = 1.7
               A->G   6.90e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UW-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 5.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UX-TP
            *CpG->T   1.75e-06    1.8/Mb  (relative = 6.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.29e-08    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 1.7
               A->G   6.80e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   9.95e-08    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.65e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DJ-A3UY-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 7.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   3.43e-08    0.0/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   3.43e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.40e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1JZ-TP
            *CpG->T   1.91e-06    1.9/Mb  (relative = 6.19)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.43e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A1K0-TP
            *CpG->T   1.32e-06    1.3/Mb  (relative = 3.80)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.09e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.48e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-DO-A2HM-TP
            *CpG->T   6.76e-06    6.8/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.44e-06    1.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.03)  expected NS/S ratio = 2.3
           transver   7.92e-07    0.8/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   3.10e-07    0.3/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.17e-06    2.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DY-TP
            *CpG->T   4.12e-06    4.1/Mb  (relative = 4.42)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   2.66e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.33e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3DZ-TP
            *CpG->T   4.75e-06    4.7/Mb  (relative = 5.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E0-TP
            *CpG->T   2.33e-06    2.3/Mb  (relative = 7.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.19e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 2.4
           transver   6.64e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.32e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E1-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 1.78)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   4.38e-07    0.4/Mb  (relative = 0.65)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.74e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E2-TP
            *CpG->T   5.93e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.16e-07    0.3/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   1.76e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.32e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E3-A3E5-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   5.53e-07    0.6/Mb  (relative = 0.71)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.80e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A242-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 1.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.48)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   3.39e-08    0.0/Mb  (relative = 0.05)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.11e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-E8-A2EA-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   8.48e-07    0.8/Mb  (relative = 0.69)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.22e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CL-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 4.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.45e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.76e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CM-TP
            *CpG->T   6.73e-07    0.7/Mb  (relative = 1.36)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.14e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.13e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   1.06e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.97e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CN-TP
            *CpG->T   3.49e-06    3.5/Mb  (relative = 3.77)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   4.75e-07    0.5/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   2.32e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.98e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.26e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CO-TP
            *CpG->T   6.32e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   7.00e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CP-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.42e-07    0.1/Mb  (relative = 0.67)  expected NS/S ratio = 2.3
           transver   7.00e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.50e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CR-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 2.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   3.53e-07    0.4/Mb  (relative = 0.30)  expected NS/S ratio = 2.3
           transver   4.52e-07    0.5/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   2.78e-07    0.3/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.18e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CS-TP
            *CpG->T   3.86e-06    3.9/Mb  (relative = 6.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CT-TP
            *CpG->T   8.75e-06    8.7/Mb  (relative = 3.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.33e-06    2.3/Mb  (relative = 0.98)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   2.99e-07    0.3/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.39e-06    2.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CU-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.05e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   2.08e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.89e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CV-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.97e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CW-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 3.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CX-TP
            *CpG->T   6.88e-07    0.7/Mb  (relative = 2.40)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   7.93e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.07e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.1
         indel+null   1.07e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.86e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CY-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.67e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.04e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3CZ-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 3.70)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.63e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.46e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.73e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D0-TP
            *CpG->T   2.37e-06    2.4/Mb  (relative = 3.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.54)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.35e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D1-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   8.16e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   7.33e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   7.33e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.20e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   6.97e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D5-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.67e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.64)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.67e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3D6-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.89)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.11e-07    0.5/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver   2.33e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   2.99e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.32e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GO-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.93e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   2.71e-07    0.3/Mb  (relative = 0.53)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.09e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GP-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.60)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.69e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GQ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GR-TP
            *CpG->T   5.87e-07    0.6/Mb  (relative = 1.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.81e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   2.00e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.0
         indel+null   9.98e-08    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.66e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GS-TP
            *CpG->T   1.85e-06    1.8/Mb  (relative = 2.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.01e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.39e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.49e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GU-TP
            *CpG->T   2.36e-06    2.4/Mb  (relative = 2.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.63e-07    0.7/Mb  (relative = 0.71)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.68e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.39e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   5.61e-07    0.6/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   3.07e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.05e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.56e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GW-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.91)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   6.79e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.74e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GX-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.33e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.33e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GY-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 3.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.45e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 1.7
               A->G   3.39e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   3.31e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.61e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.61e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3GZ-TP
            *CpG->T   5.80e-07    0.6/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.46e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.36e-07    0.1/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.31e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 0.68)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.21e-07    0.3/Mb  (relative = 0.35)  expected NS/S ratio = 1.6
               A->G   1.55e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   3.71e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 4.9
         indel+null   2.97e-07    0.3/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.27e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H2-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 2.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.75e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H3-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H4-TP
            *CpG->T   6.18e-07    0.6/Mb  (relative = 1.64)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.36)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.76e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H5-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 2.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.40e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H7-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 1.88)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   4.01e-07    0.4/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.37e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3H8-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.22)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.36e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   6.70e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   2.01e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.36e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MW-TP
            *CpG->T   5.98e-07    0.6/Mb  (relative = 1.37)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.54)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MX-TP
            *CpG->T   2.35e-06    2.4/Mb  (relative = 2.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   4.16e-07    0.4/Mb  (relative = 0.40)  expected NS/S ratio = 2.4
           transver   3.37e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.05e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MY-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   4.24e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 2.4
           transver   2.73e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.28)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.52e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3MZ-TP
            *CpG->T   4.14e-06    4.1/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.50e-07    0.4/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.18)  expected NS/S ratio = 2.4
           transver   2.06e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   4.47e-07    0.4/Mb  (relative = 0.37)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.20e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N2-TP
            *CpG->T   2.38e-06    2.4/Mb  (relative = 3.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.68e-07    0.4/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.10)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.35)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.71e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3N3-TP
            *CpG->T   1.16e-06    1.2/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.91e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.08e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   9.94e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.94e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T0-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 1.83)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.12e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   4.77e-07    0.5/Mb  (relative = 0.49)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.33e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.66e-07    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T1-TP
            *CpG->T   3.57e-06    3.6/Mb  (relative = 4.84)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.30)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T2-TP
            *CpG->T   1.23e-06    1.2/Mb  (relative = 1.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   2.04e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.24)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.14e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T3-TP
            *CpG->T   1.17e-06    1.2/Mb  (relative = 1.16)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.86e-07    0.6/Mb  (relative = 0.58)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   3.34e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.00e-06    1.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.96e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   6.83e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T7-TP
            *CpG->T   3.54e-06    3.5/Mb  (relative = 6.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.4
           transver   1.67e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T8-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   6.94e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 5.0
         indel+null   6.79e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.42e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3T9-TP
            *CpG->T   3.56e-06    3.6/Mb  (relative = 5.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.69e-07    0.4/Mb  (relative = 0.61)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TA-TP
            *CpG->T   6.16e-07    0.6/Mb  (relative = 2.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.96e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EL-A3TB-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.73e-07    0.4/Mb  (relative = 0.42)  expected NS/S ratio = 1.7
               A->G   2.78e-07    0.3/Mb  (relative = 0.31)  expected NS/S ratio = 2.3
           transver   2.37e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.70e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.82e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CS-TP
            *CpG->T   1.82e-06    1.8/Mb  (relative = 3.87)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.39e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.70e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CT-TP
            *CpG->T   2.56e-06    2.6/Mb  (relative = 4.15)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   2.05e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.03e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.16e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CU-TP
            *CpG->T   6.54e-07    0.7/Mb  (relative = 0.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.34e-07    0.5/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   3.11e-07    0.3/Mb  (relative = 0.43)  expected NS/S ratio = 5.1
         indel+null   6.91e-08    0.1/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.25e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CV-TP
            *CpG->T   6.25e-07    0.6/Mb  (relative = 2.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.08e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1CW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.40e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 5.1
         indel+null   1.37e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.49e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YA-TP
            *CpG->T   1.29e-06    1.3/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.11)  expected NS/S ratio = 5.1
         indel+null   6.95e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YB-TP
            *CpG->T   4.47e-06    4.5/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.06e-06    1.1/Mb  (relative = 0.86)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   2.76e-07    0.3/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   2.41e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YC-TP
            *CpG->T   6.41e-07    0.6/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.07e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null   3.46e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.15e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YD-TP
            *CpG->T   6.44e-07    0.6/Mb  (relative = 3.71)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.66e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   3.47e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.47e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A1YE-TP
            *CpG->T   1.93e-06    1.9/Mb  (relative = 4.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.07e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   6.97e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.18e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22I-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   7.05e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.03e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22J-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.56e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   4.22e-07    0.4/Mb  (relative = 0.77)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.38e-07    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22K-TP
            *CpG->T   5.89e-07    0.6/Mb  (relative = 1.17)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.55)  expected NS/S ratio = 2.4
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22L-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 5.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.35e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22M-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.80e-07    0.4/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   7.02e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.48e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22N-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   7.03e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   3.45e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.41e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22O-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.98e-07    0.6/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   6.29e-07    0.6/Mb  (relative = 0.53)  expected NS/S ratio = 2.4
           transver   3.74e-07    0.4/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.81e-08    0.1/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.19e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22P-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 1.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.60)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.75e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A22Q-TP
            *CpG->T   6.12e-07    0.6/Mb  (relative = 1.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   6.83e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.07e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CJ-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 3.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.00e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CK-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 5.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.34e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.34e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.01e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CM-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 1.7
               A->G   3.44e-07    0.3/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.05e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CN-TP
            *CpG->T   2.47e-06    2.5/Mb  (relative = 4.25)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.82e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CO-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.32e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.40e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.30e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CP-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.33e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.00e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CR-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.74)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CT-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.74)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   3.35e-08    0.0/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2CU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.45e-07    0.1/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   3.58e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.08e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.15e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OV-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.41e-07    0.4/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   2.74e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.3
           transver   2.68e-07    0.3/Mb  (relative = 0.32)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OW-TP
            *CpG->T   5.92e-07    0.6/Mb  (relative = 1.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.33e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OX-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 1.02)  expected NS/S ratio = 2.3
           transver   6.90e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.38e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2OY-TP
            *CpG->T   1.76e-06    1.8/Mb  (relative = 3.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.93e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.00e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   3.34e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.67e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P0-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.26)  expected NS/S ratio = 2.4
           transver   1.66e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   6.65e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.66e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P1-TP
            *CpG->T   5.86e-07    0.6/Mb  (relative = 3.52)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.31e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   6.66e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.33e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.67e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P2-TP
            *CpG->T   3.51e-06    3.5/Mb  (relative = 4.38)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.67e-07    0.4/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.4
           transver   2.00e-07    0.2/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.02e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A2P3-TP
            *CpG->T   5.94e-07    0.6/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   6.86e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   1.68e-07    0.2/Mb  (relative = 0.45)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.69e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AI-TP
            *CpG->T   1.20e-06    1.2/Mb  (relative = 2.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.52)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   6.72e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.71e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AJ-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.44e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   6.77e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.03e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AK-TP
            *CpG->T   6.08e-07    0.6/Mb  (relative = 1.50)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AL-TP
            *CpG->T   4.80e-06    4.8/Mb  (relative = 7.94)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.36e-08    0.0/Mb  (relative = 0.06)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AN-TP
            *CpG->T   1.18e-06    1.2/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.83e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.67e-08    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.33e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.09)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.34e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.05e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.34e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   6.68e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.34e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AP-TP
            *CpG->T   3.15e-06    3.2/Mb  (relative = 2.54)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.52e-07    0.2/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   3.51e-07    0.4/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   2.41e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   5.86e-07    0.6/Mb  (relative = 0.47)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.24e-06    1.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AQ-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.15e-07    0.5/Mb  (relative = 0.77)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.69e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3AR-TP
            *CpG->T   6.04e-07    0.6/Mb  (relative = 1.62)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.56)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FJ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.6
               A->G   1.47e-07    0.1/Mb  (relative = 0.83)  expected NS/S ratio = 2.4
           transver   3.54e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 4.9
         indel+null   7.09e-08    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.77e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FK-TP
            *CpG->T   2.00e-06    2.0/Mb  (relative = 4.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.13e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.29e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   7.44e-08    0.1/Mb  (relative = 0.15)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.84e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FL-TP
            *CpG->T   2.32e-06    2.3/Mb  (relative = 4.92)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.39e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.4
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.73e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FM-TP
            *CpG->T   3.69e-06    3.7/Mb  (relative = 4.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   2.86e-07    0.3/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.09e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   1.39e-07    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.01e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FN-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 0.66)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.76e-07    0.4/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   5.60e-07    0.6/Mb  (relative = 0.61)  expected NS/S ratio = 2.3
           transver   3.42e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.23e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FO-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 4.06)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.38e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.4
           transver   6.72e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.37e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FP-TP
            *CpG->T   6.15e-07    0.6/Mb  (relative = 1.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.39)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.4
           transver   2.43e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 5.0
         indel+null   1.04e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.90e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FQ-TP
            *CpG->T   5.84e-07    0.6/Mb  (relative = 1.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.68e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3FR-TP
            *CpG->T   3.00e-06    3.0/Mb  (relative = 3.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.21e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 1.7
               A->G   4.10e-07    0.4/Mb  (relative = 0.49)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.37e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O3-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 1.90)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-07    0.7/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   4.19e-07    0.4/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   3.40e-07    0.3/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.38e-07    0.2/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.26e-06    1.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.22e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.35e-07    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.71e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O7-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.54e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.72)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.81e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O8-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 6.02)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.42e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.06e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.03e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3O9-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.44e-07    0.4/Mb  (relative = 0.57)  expected NS/S ratio = 1.7
               A->G   4.80e-07    0.5/Mb  (relative = 0.62)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.74e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OA-TP
            *CpG->T   2.44e-06    2.4/Mb  (relative = 4.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 1.7
               A->G   2.75e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.31)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-EM-A3OB-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   3.43e-07    0.3/Mb  (relative = 0.64)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.19)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.39e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25G-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.72e-07    0.4/Mb  (relative = 1.38)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.0
         indel+null   3.38e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.70e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25I-TP
            *CpG->T   1.24e-06    1.2/Mb  (relative = 2.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.03e-07    0.2/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25J-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25K-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.51e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G   6.92e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   1.70e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.72e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25O-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.00e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   4.17e-07    0.4/Mb  (relative = 0.87)  expected NS/S ratio = 2.3
           transver   6.82e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   6.82e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.77e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A25R-TP
            *CpG->T   5.90e-07    0.6/Mb  (relative = 2.51)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.37e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.35e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MY-TP
            *CpG->T   3.04e-06    3.0/Mb  (relative = 1.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.04e-06    1.0/Mb  (relative = 0.53)  expected NS/S ratio = 1.7
               A->G   5.52e-07    0.6/Mb  (relative = 0.28)  expected NS/S ratio = 2.3
           transver   9.47e-07    0.9/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.77e-08    0.1/Mb  (relative = 0.03)
        double_null   3.38e-08    0.0/Mb  (relative = 0.02)
              Total   1.96e-06    2.0/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2MZ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.69e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.60)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N0-TP
            *CpG->T   1.25e-06    1.3/Mb  (relative = 2.81)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.7
               A->G   2.10e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.46e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N1-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.58e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.90)  expected NS/S ratio = 2.3
           transver   6.88e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.09e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   3.17e-07    0.3/Mb  (relative = 0.81)  expected NS/S ratio = 1.7
               A->G   7.19e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.14e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.93e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A2N5-TP
            *CpG->T   6.09e-07    0.6/Mb  (relative = 1.29)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.98e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   3.45e-07    0.3/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   3.38e-08    0.0/Mb  (relative = 0.07)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39I-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.40)  expected NS/S ratio = 1.7
               A->G   2.11e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 2.3
           transver   6.93e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.93e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.81e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39J-TP
            *CpG->T   6.40e-07    0.6/Mb  (relative = 1.85)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.65e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.1
         indel+null   1.39e-07    0.1/Mb  (relative = 0.40)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39K-TP
            *CpG->T   6.22e-07    0.6/Mb  (relative = 2.01)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.57e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   1.41e-07    0.1/Mb  (relative = 0.45)  expected NS/S ratio = 2.3
           transver   1.38e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.10e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39L-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 2.03)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.87e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39M-TP
            *CpG->T   5.22e-06    5.2/Mb  (relative = 6.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.62e-07    0.4/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   2.71e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 2.4
           transver   1.32e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   9.90e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.25e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39N-TP
            *CpG->T   2.60e-06    2.6/Mb  (relative = 7.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.30)  expected NS/S ratio = 5.0
         indel+null   3.51e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.51e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39O-TP
            *CpG->T   1.28e-06    1.3/Mb  (relative = 3.69)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.29e-07    0.2/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   7.04e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.47e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39P-TP
            *CpG->T   6.70e-07    0.7/Mb  (relative = 1.35)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.84e-08    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   2.83e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 5.1
         indel+null   7.08e-08    0.1/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.96e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39R-TP
            *CpG->T   6.56e-07    0.7/Mb  (relative = 3.73)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.11e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 2.3
           transver   3.51e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.76e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39S-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 2.59)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   6.91e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 2.3
           transver   6.78e-08    0.1/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.29)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.37e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A39T-TP
            *CpG->T   2.51e-06    2.5/Mb  (relative = 6.08)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.51e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.12e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BN-TP
            *CpG->T   2.59e-06    2.6/Mb  (relative = 9.31)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.68e-08    0.1/Mb  (relative = 0.28)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.48e-08    0.0/Mb  (relative = 0.12)  expected NS/S ratio = 5.1
         indel+null   6.96e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.78e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BO-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   7.09e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.49e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.1
         indel+null   1.40e-07    0.1/Mb  (relative = 0.67)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.10e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BP-TP
            *CpG->T   1.31e-06    1.3/Mb  (relative = 9.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.02e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.40e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BQ-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 2.12)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.46e-07    0.4/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   6.88e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 2.3
           transver   2.02e-07    0.2/Mb  (relative = 0.35)  expected NS/S ratio = 5.0
         indel+null   6.75e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.74e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BS-TP
            *CpG->T   5.95e-07    0.6/Mb  (relative = 2.20)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.01e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.76e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.71e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BT-TP
            *CpG->T   1.96e-06    2.0/Mb  (relative = 2.95)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.09e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 1.7
               A->G   2.13e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.3
           transver   2.10e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.16)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.65e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BU-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.70e-08    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   7.07e-08    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.97e-08    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.1
         indel+null   3.49e-08    0.0/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.74e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BV-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 0.72)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.97e-07    0.6/Mb  (relative = 0.70)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 2.3
           transver   4.07e-07    0.4/Mb  (relative = 0.48)  expected NS/S ratio = 5.0
         indel+null   6.78e-08    0.1/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.48e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BW-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.84e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null   6.84e-08    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.37e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3BX-TP
            *CpG->T   6.47e-07    0.6/Mb  (relative = 2.07)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.30e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G   7.06e-08    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.48e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.13e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DO-TP
            *CpG->T   6.50e-07    0.6/Mb  (relative = 1.10)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.62e-07    0.5/Mb  (relative = 0.78)  expected NS/S ratio = 1.7
               A->G   2.12e-07    0.2/Mb  (relative = 0.36)  expected NS/S ratio = 2.3
           transver   1.39e-07    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 5.1
         indel+null   1.05e-07    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.93e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DP-TP
            *CpG->T   6.29e-07    0.6/Mb  (relative = 1.33)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.38e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.32)  expected NS/S ratio = 2.4
           transver   1.45e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null   1.09e-07    0.1/Mb  (relative = 0.23)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.73e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DQ-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.59e-08    0.1/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   3.44e-08    0.0/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.44e-08    0.0/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.03e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DR-TP
            *CpG->T   2.66e-06    2.7/Mb  (relative = 4.73)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   2.33e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   2.84e-07    0.3/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   1.05e-07    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 5.1
         indel+null   7.03e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.63e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DS-TP
            *CpG->T   6.45e-07    0.6/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.54e-07    0.2/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.04e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null   3.48e-08    0.0/Mb  (relative = 0.14)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.44e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DT-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.89e-08    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DU-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 3.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.74e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.10e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DV-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 4.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.35e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   6.84e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.42)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.01e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-ET-A3DW-TP
            *CpG->T   1.27e-06    1.3/Mb  (relative = 2.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.53e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 1.7
               A->G   3.52e-07    0.4/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.73e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.46e-08    0.0/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.19e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A22Z-TP
            *CpG->T   1.86e-06    1.9/Mb  (relative = 2.80)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.60e-07    0.5/Mb  (relative = 0.69)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 2.4
           transver   1.05e-07    0.1/Mb  (relative = 0.16)  expected NS/S ratio = 5.0
         indel+null   1.75e-07    0.2/Mb  (relative = 0.26)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.64e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A230-TP
            *CpG->T   2.49e-06    2.5/Mb  (relative = 12.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.98e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.42e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A231-TP
            *CpG->T   1.88e-06    1.9/Mb  (relative = 3.43)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.41)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 2.3
           transver   2.06e-07    0.2/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.87e-08    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.50e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A232-TP
            *CpG->T   6.26e-07    0.6/Mb  (relative = 1.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.26e-07    0.2/Mb  (relative = 0.51)  expected NS/S ratio = 1.7
               A->G   3.48e-07    0.3/Mb  (relative = 0.78)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.45e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A233-TP
            *CpG->T   6.31e-07    0.6/Mb  (relative = 2.56)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.59)  expected NS/S ratio = 2.4
           transver   1.41e-07    0.1/Mb  (relative = 0.57)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.47e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A234-TP
            *CpG->T   1.26e-06    1.3/Mb  (relative = 2.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   3.56e-07    0.4/Mb  (relative = 0.73)  expected NS/S ratio = 2.3
           transver   2.44e-07    0.2/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.88e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A235-TP
            *CpG->T   3.13e-06    3.1/Mb  (relative = 6.58)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.25e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.75e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A236-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 5.45)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.48e-07    0.1/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   6.73e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A237-TP
            *CpG->T   6.23e-07    0.6/Mb  (relative = 2.04)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.50e-08    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   3.40e-08    0.0/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.06e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A23A-TP
            *CpG->T   5.97e-07    0.6/Mb  (relative = 2.18)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.50e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.4
           transver   1.03e-07    0.1/Mb  (relative = 0.38)  expected NS/S ratio = 5.0
         indel+null   6.85e-08    0.1/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.74e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.52e-08    0.1/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   6.95e-08    0.1/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   3.41e-08    0.0/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.05e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PC-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 2.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 1.7
               A->G   4.78e-07    0.5/Mb  (relative = 0.53)  expected NS/S ratio = 2.3
           transver   3.35e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.07)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   9.03e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FE-A3PD-TP
            *CpG->T   1.79e-06    1.8/Mb  (relative = 2.97)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   3.42e-07    0.3/Mb  (relative = 0.57)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.28)  expected NS/S ratio = 5.0
         indel+null   6.69e-08    0.1/Mb  (relative = 0.11)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.02e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3S3-TP
            *CpG->T   1.77e-06    1.8/Mb  (relative = 3.53)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   1.00e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.20)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.02e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SB-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.41e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.82)  expected NS/S ratio = 2.3
           transver   1.35e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   3.37e-08    0.0/Mb  (relative = 0.10)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.37e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SD-TP
            *CpG->T   1.78e-06    1.8/Mb  (relative = 2.05)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   6.61e-07    0.7/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   4.11e-07    0.4/Mb  (relative = 0.47)  expected NS/S ratio = 2.3
           transver   1.67e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.70e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SE-TP
            *CpG->T   3.55e-06    3.6/Mb  (relative = 7.60)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.20e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   6.68e-08    0.1/Mb  (relative = 0.14)  expected NS/S ratio = 5.0
         indel+null   1.00e-07    0.1/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SG-TP
            *CpG->T   1.19e-06    1.2/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.95e-07    0.3/Mb  (relative = 0.59)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.4
           transver   6.71e-08    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   1.68e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.03e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FK-A3SH-TP
            *CpG->T   2.98e-06    3.0/Mb  (relative = 3.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.89e-07    0.6/Mb  (relative = 0.76)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 2.3
           transver   2.01e-07    0.2/Mb  (relative = 0.26)  expected NS/S ratio = 5.0
         indel+null   6.70e-08    0.1/Mb  (relative = 0.09)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.71e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A2QD-TP
            *CpG->T   6.60e-07    0.7/Mb  (relative = 3.13)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.55e-07    0.2/Mb  (relative = 0.74)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   7.03e-08    0.1/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   3.51e-08    0.0/Mb  (relative = 0.17)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.11e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3BL-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.2
      *Cp(A/C/T)->T   1.58e-07    0.2/Mb  (relative = 0.89)  expected NS/S ratio = 1.7
               A->G   1.44e-07    0.1/Mb  (relative = 0.81)  expected NS/S ratio = 2.3
           transver   3.56e-08    0.0/Mb  (relative = 0.20)  expected NS/S ratio = 5.1
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.78e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I4-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   2.09e-07    0.2/Mb  (relative = 0.62)  expected NS/S ratio = 2.4
           transver   1.36e-07    0.1/Mb  (relative = 0.40)  expected NS/S ratio = 5.0
         indel+null   1.02e-07    0.1/Mb  (relative = 0.30)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.39e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3I5-TP
            *CpG->T   4.83e-06    4.8/Mb  (relative = 7.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.40e-08    0.1/Mb  (relative = 0.12)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.34e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.05e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NM-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.61)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   3.75e-07    0.4/Mb  (relative = 0.50)  expected NS/S ratio = 1.7
               A->G   4.20e-07    0.4/Mb  (relative = 0.56)  expected NS/S ratio = 2.4
           transver   6.84e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 5.0
         indel+null   2.39e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.52e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NN-TP
            *CpG->T   2.96e-06    3.0/Mb  (relative = 4.86)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.23e-07    0.2/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.79e-07    0.3/Mb  (relative = 0.46)  expected NS/S ratio = 2.4
           transver   6.78e-08    0.1/Mb  (relative = 0.11)  expected NS/S ratio = 5.0
         indel+null   1.36e-07    0.1/Mb  (relative = 0.22)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.10e-07    0.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3NP-TP
            *CpG->T   1.95e-06    1.9/Mb  (relative = 4.41)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.41e-07    0.2/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   1.51e-07    0.2/Mb  (relative = 0.34)  expected NS/S ratio = 2.4
           transver   1.10e-07    0.1/Mb  (relative = 0.25)  expected NS/S ratio = 5.0
         indel+null   3.67e-08    0.0/Mb  (relative = 0.08)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.41e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3ON-TP
            *CpG->T   6.14e-07    0.6/Mb  (relative = 1.65)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.46e-08    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.03e-07    0.2/Mb  (relative = 0.55)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.72e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R6-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 5.11)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.63)  expected NS/S ratio = 1.7
               A->G   6.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 2.3
           transver         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.36)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.67e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R7-TP
            *CpG->T   2.42e-06    2.4/Mb  (relative = 3.14)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.96e-07    0.3/Mb  (relative = 0.38)  expected NS/S ratio = 1.7
               A->G   6.85e-08    0.1/Mb  (relative = 0.09)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.13)  expected NS/S ratio = 5.0
         indel+null   3.69e-07    0.4/Mb  (relative = 0.48)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.73e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R8-TP
            *CpG->T   1.99e-06    2.0/Mb  (relative = 3.76)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.82e-08    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 1.7
               A->G   1.43e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.77e-07    0.2/Mb  (relative = 0.33)  expected NS/S ratio = 5.1
         indel+null   1.41e-07    0.1/Mb  (relative = 0.27)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.30e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3R9-TP
            *CpG->T   2.40e-06    2.4/Mb  (relative = 2.99)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.94e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 1.7
               A->G   2.73e-07    0.3/Mb  (relative = 0.34)  expected NS/S ratio = 2.3
           transver   2.34e-07    0.2/Mb  (relative = 0.29)  expected NS/S ratio = 5.0
         indel+null   1.67e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.03e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3RA-TP
            *CpG->T   1.84e-06    1.8/Mb  (relative = 4.55)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   2.02e-07    0.2/Mb  (relative = 0.50)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.05e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3W9-TP
            *CpG->T   1.21e-06    1.2/Mb  (relative = 1.79)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   4.45e-07    0.4/Mb  (relative = 0.66)  expected NS/S ratio = 1.7
               A->G   2.76e-07    0.3/Mb  (relative = 0.41)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.15)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.25)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   6.75e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-FY-A3WA-TP
            *CpG->T   3.07e-06    3.1/Mb  (relative = 6.46)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.24e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 1.7
               A->G   2.08e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 2.3
           transver   1.02e-07    0.1/Mb  (relative = 0.21)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.76e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-GE-A2C6-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.78e-08    0.1/Mb  (relative = 0.55)  expected NS/S ratio = 1.7
               A->G   7.27e-08    0.1/Mb  (relative = 0.51)  expected NS/S ratio = 2.4
           transver   7.09e-08    0.1/Mb  (relative = 0.50)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.42e-07    0.1/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A26U-TP
            *CpG->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.28e-08    0.1/Mb  (relative = 0.24)  expected NS/S ratio = 1.7
               A->G   2.04e-07    0.2/Mb  (relative = 0.68)  expected NS/S ratio = 2.3
           transver   6.63e-08    0.1/Mb  (relative = 0.22)  expected NS/S ratio = 5.0
         indel+null   9.95e-08    0.1/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.99e-07    0.3/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A2K9-TP
            *CpG->T   6.20e-07    0.6/Mb  (relative = 1.21)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.27e-07    0.2/Mb  (relative = 0.44)  expected NS/S ratio = 1.7
               A->G   1.40e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   1.71e-07    0.2/Mb  (relative = 0.33)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.14e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RH-TP
            *CpG->T   1.83e-06    1.8/Mb  (relative = 2.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.49e-07    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 1.7
               A->G   4.12e-07    0.4/Mb  (relative = 0.51)  expected NS/S ratio = 2.3
           transver   2.70e-07    0.3/Mb  (relative = 0.33)  expected NS/S ratio = 5.0
         indel+null   1.69e-07    0.2/Mb  (relative = 0.21)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.09e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-H2-A3RI-TP
            *CpG->T   1.22e-06    1.2/Mb  (relative = 3.28)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   2.97e-07    0.3/Mb  (relative = 0.80)  expected NS/S ratio = 1.7
               A->G   6.87e-08    0.1/Mb  (relative = 0.19)  expected NS/S ratio = 2.3
           transver   6.74e-08    0.1/Mb  (relative = 0.18)  expected NS/S ratio = 5.0
         indel+null   6.74e-08    0.1/Mb  (relative = 0.18)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   3.71e-07    0.4/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3EB-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 4.75)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T         00    0.0/Mb  (relative = 0.00)  expected NS/S ratio = 1.7
               A->G   1.37e-07    0.1/Mb  (relative = 0.27)  expected NS/S ratio = 2.3
           transver   2.35e-07    0.2/Mb  (relative = 0.47)  expected NS/S ratio = 5.0
         indel+null   6.71e-08    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   5.04e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3ED-TP
            *CpG->T   6.06e-07    0.6/Mb  (relative = 2.57)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-08    0.1/Mb  (relative = 0.31)  expected NS/S ratio = 1.7
               A->G   1.38e-07    0.1/Mb  (relative = 0.58)  expected NS/S ratio = 2.3
           transver   1.01e-07    0.1/Mb  (relative = 0.43)  expected NS/S ratio = 5.0
         indel+null         00    0.0/Mb  (relative = 0.00)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   2.36e-07    0.2/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U2-TP
            *CpG->T   6.44e-06    6.4/Mb  (relative = 3.96)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   8.02e-07    0.8/Mb  (relative = 0.49)  expected NS/S ratio = 1.7
               A->G   6.12e-07    0.6/Mb  (relative = 0.38)  expected NS/S ratio = 2.4
           transver   3.98e-07    0.4/Mb  (relative = 0.24)  expected NS/S ratio = 5.0
         indel+null   1.99e-07    0.2/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   1.63e-06    1.6/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-IM-A3U3-TP
            *CpG->T   3.03e-06    3.0/Mb  (relative = 3.44)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.43e-07    0.7/Mb  (relative = 0.85)  expected NS/S ratio = 1.7
               A->G   2.07e-07    0.2/Mb  (relative = 0.24)  expected NS/S ratio = 2.3
           transver   1.69e-07    0.2/Mb  (relative = 0.19)  expected NS/S ratio = 5.0
         indel+null   1.01e-07    0.1/Mb  (relative = 0.12)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   8.78e-07    0.9/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3NZ-TP
            *CpG->T   1.75e-06    1.7/Mb  (relative = 2.36)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   1.47e-07    0.1/Mb  (relative = 0.20)  expected NS/S ratio = 1.7
               A->G   2.77e-07    0.3/Mb  (relative = 0.37)  expected NS/S ratio = 2.4
           transver   2.02e-07    0.2/Mb  (relative = 0.27)  expected NS/S ratio = 5.0
         indel+null   2.35e-07    0.2/Mb  (relative = 0.32)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.39e-07    0.7/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O0-TP
            *CpG->T   5.91e-07    0.6/Mb  (relative = 1.26)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   7.77e-08    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 1.6
               A->G   2.27e-07    0.2/Mb  (relative = 0.48)  expected NS/S ratio = 2.4
           transver   1.08e-07    0.1/Mb  (relative = 0.23)  expected NS/S ratio = 4.9
         indel+null   1.80e-07    0.2/Mb  (relative = 0.38)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   4.68e-07    0.5/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

THCA-J8-A3O1-TP
            *CpG->T   2.39e-06    2.4/Mb  (relative = 3.03)  expected NS/S ratio = 2.1
      *Cp(A/C/T)->T   5.27e-07    0.5/Mb  (relative = 0.67)  expected NS/S ratio = 1.7
               A->G   3.54e-07    0.4/Mb  (relative = 0.45)  expected NS/S ratio = 2.4
           transver   1.38e-07    0.1/Mb  (relative = 0.17)  expected NS/S ratio = 5.0
         indel+null   1.03e-07    0.1/Mb  (relative = 0.13)
        double_null         00    0.0/Mb  (relative = 0.00)
              Total   7.91e-07    0.8/Mb  (relative = 1.00)  expected NS/S ratio = 3.5

Analyzing silent/nonsilent ratios
1000/18093 2000/18093 3000/18093 4000/18093 5000/18093 6000/18093 7000/18093 8000/18093 9000/18093 10000/18093 11000/18093 12000/18093 13000/18093 14000/18093 15000/18093 16000/18093 17000/18093 18000/18093 Done
estimate_nonsilent_passengers_from_silent

Running "classic" MutSig:
Scatter job 200: processing genes 18004 - 18093
Calculating significance of each gene.
Using projection method.
18004	ZNF8	1.037842e-01
18005	ZNF80	4.435059e-02
18006	ZNF800	1
In gene ZNF804A the following bins exceed PROBCAP:
    THCA-DJ-A2Q6-TP	categ 6	N = 3646    n = 1	mu =   1.02e-07
18007	ZNF804A	8.431103e-02
18008	ZNF804B	3.893854e-01
18009	ZNF805	1
18010	ZNF808	1
18011	ZNF81	1
18012	ZNF813	1
18013	ZNF814	1
18014	ZNF816A	1
18015	ZNF821	1
18016	ZNF823	1
18017	ZNF827	1
18018	ZNF828	1
18019	ZNF829	1
18020	ZNF83	1
18021	ZNF830	1
18022	ZNF831	1
18023	ZNF835	1.695556e-01
18024	ZNF836	1
18025	ZNF839	1.727793e-01
18026	ZNF841	1
18027	ZNF844	1.361719e-02
18028	ZNF845	3.531372e-06
18029	ZNF846	1
18030	ZNF85	1
18031	ZNF860	1
18032	ZNF862	1
In gene ZNF878 the following bins exceed PROBCAP:
    THCA-EL-A3H3-TP	categ 5	N = 1581    n = 1	mu =   6.83e-08
18033	ZNF878	9.850878e-05
18034	ZNF880	1
18035	ZNF883	1
18036	ZNF90	1
18037	ZNF91	3.930855e-01
18038	ZNF92	1
18039	ZNF93	7.747975e-02
18040	ZNF98	1
18041	ZNF99	8.862932e-03
18042	ZNFX1	4.086546e-01
18043	ZNHIT1	6.750893e-02
18044	ZNHIT2	1
18045	ZNHIT3	1
18046	ZNHIT6	7.406218e-02
18047	ZNRD1	1
18048	ZNRF1	1
18049	ZNRF2	1
18050	ZNRF3	2.705781e-01
18051	ZNRF4	1
18052	ZP1	1
18053	ZP2	1
18054	ZP3	1
18055	ZP4	1
18056	ZPBP	1
18057	ZPBP2	1
18058	ZPLD1	1
18059	ZRANB1	1
18060	ZRANB2	1
18061	ZRANB3	3.219257e-01
18062	ZRSR2	1
18063	ZSCAN1	1
18064	ZSCAN10	1
18065	ZSCAN12	1
18066	ZSCAN16	1
18067	ZSCAN18	1
18068	ZSCAN2	1
18069	ZSCAN20	8.745201e-02
18070	ZSCAN21	1
18071	ZSCAN22	1
18072	ZSCAN23	1
18073	ZSCAN29	1
18074	ZSCAN4	1
18075	ZSCAN5A	1.335391e-01
18076	ZSCAN5B	2.032050e-01
18077	ZSWIM1	1
18078	ZSWIM2	1
18079	ZSWIM3	1
18080	ZSWIM4	1
18081	ZSWIM5	1
18082	ZSWIM7	1
18083	ZUFSP	1
18084	ZW10	1.322200e-02
18085	ZWILCH	1
18086	ZWINT	1
18087	ZXDA	1
18088	ZXDB	1
18089	ZXDC	1.992486e-01
18090	ZYG11B	1
18091	ZYX	1
18092	ZZEF1	4.397140e-01
18093	ZZZ3	2.240313e-01
Done

Running MutSig 2:
Scatter job 200: processing genes 18004 - 18093
Running MutSig clustering v0.01 ;)
Sorting genes by total number of mutations....
Processing gene list...
ZNF845
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.602602e-01	ci left: 9.594514e-03	ci right 1.389697e-02	k: 116	n:10000
Cons ci ratio: 6.788960e-04	ci left: 9.992777e-01	ci right 9.999758e-01	k: 9998	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
ZNF845   10000 perm   2 sec   (5006 perm/sec)   p_kst 1.000000e-04   p_cons 9.998000e-01   p_joint 1.160000e-02

Joint ci ratio: 4.293715e-01	ci left: 3.262140e-03	ci right 5.086662e-03	k: 82	n:20000
Cons ci ratio: 6.790828e-04	ci left: 9.990161e-01	ci right 9.997254e-01	k: 19989	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
ZNF845   20000 perm   7 sec   (2841 perm/sec)   p_kst 5.000000e-05   p_cons 9.994500e-01   p_joint 4.100000e-03

Joint ci ratio: 4.520690e-01	ci left: 1.937345e-03	ci right 3.095698e-03	k: 74	n:30000
Cons ci ratio: 5.227625e-04	ci left: 9.991755e-01	ci right 9.997201e-01	k: 29985	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
ZNF845   30000 perm   10 sec   (3141 perm/sec)   p_kst 3.333333e-05   p_cons 9.995000e-01   p_joint 2.466667e-03

Joint ci ratio: 3.995980e-01	ci left: 1.921929e-03	ci right 2.902547e-03	k: 95	n:40000
Cons ci ratio: 4.383515e-04	ci left: 9.992583e-01	ci right 9.997140e-01	k: 39981	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
ZNF845   40000 perm   12 sec   (3363 perm/sec)   p_kst 2.500000e-05   p_cons 9.995250e-01   p_joint 2.375000e-03

Joint ci ratio: 3.767908e-01	ci left: 1.754103e-03	ci right 2.585394e-03	k: 107	n:50000
Cons ci ratio: 3.760609e-04	ci left: 9.993339e-01	ci right 9.997242e-01	k: 49978	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
ZNF845   50000 perm   14 sec   (3498 perm/sec)   p_kst 2.000000e-05   p_cons 9.995600e-01   p_joint 2.140000e-03

Joint ci ratio: 3.751236e-01	ci left: 1.476801e-03	ci right 2.172806e-03	k: 108	n:60000
Cons ci ratio: 3.267211e-04	ci left: 9.994049e-01	ci right 9.997437e-01	k: 59976	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
ZNF845   60000 perm   17 sec   (3583 perm/sec)   p_kst 1.666667e-05   p_cons 9.996000e-01   p_joint 1.800000e-03

Joint ci ratio: 3.502998e-01	ci left: 1.473592e-03	ci right 2.111702e-03	k: 124	n:70000
Cons ci ratio: 2.910303e-04	ci left: 9.994558e-01	ci right 9.997574e-01	k: 69974	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
ZNF845   70000 perm   19 sec   (3630 perm/sec)   p_kst 1.428571e-05   p_cons 9.996286e-01   p_joint 1.771429e-03

Joint ci ratio: 3.346192e-01	ci left: 1.426492e-03	ci right 2.010597e-03	k: 136	n:80000
Cons ci ratio: 2.772326e-04	ci left: 9.994500e-01	ci right 9.997367e-01	k: 79969	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
ZNF845   80000 perm   22 sec   (3653 perm/sec)   p_kst 1.250000e-05   p_cons 9.996125e-01   p_joint 1.700000e-03

Joint ci ratio: 3.422407e-01	ci left: 1.206966e-03	ci right 1.714928e-03	k: 130	n:90000
Cons ci ratio: 2.577211e-04	ci left: 9.994721e-01	ci right 9.997384e-01	k: 89966	n:90000
KS ci ratio: 2.771812e+00	ci left: 2.813089e-07	ci right 6.190558e-05	k: 1	n:90000
ZNF845   90000 perm   25 sec   (3662 perm/sec)   p_kst 1.111111e-05   p_cons 9.996222e-01   p_joint 1.444444e-03

Joint ci ratio: 3.637499e-01	ci left: 9.495334e-04	ci right 1.380242e-03	k: 115	n:100000
Cons ci ratio: 2.384825e-04	ci left: 9.995016e-01	ci right 9.997478e-01	k: 99964	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
ZNF845   100000 perm   27 sec   (3662 perm/sec)   p_kst 1.000000e-05   p_cons 9.996400e-01   p_joint 1.150000e-03

Joint ci ratio: 3.752801e-01	ci left: 8.054719e-04	ci right 1.185268e-03	k: 108	n:110000
Cons ci ratio: 2.225834e-04	ci left: 9.995259e-01	ci right 9.997555e-01	k: 109962	n:110000
KS ci ratio: 2.263172e+00	ci left: 2.201910e-06	ci right 6.567742e-05	k: 2	n:110000
ZNF845   110000 perm   30 sec   (3651 perm/sec)   p_kst 1.818182e-05   p_cons 9.996545e-01   p_joint 9.818182e-04

Joint ci ratio: 3.860817e-01	ci left: 6.931249e-04	ci right 1.031748e-03	k: 102	n:120000
Cons ci ratio: 2.066323e-04	ci left: 9.995557e-01	ci right 9.997689e-01	k: 119961	n:120000
KS ci ratio: 2.263175e+00	ci left: 2.018417e-06	ci right 6.020442e-05	k: 2	n:120000
ZNF845   120000 perm   33 sec   (3635 perm/sec)   p_kst 1.666667e-05   p_cons 9.996750e-01   p_joint 8.500000e-04

Joint ci ratio: 3.188185e-01	ci left: 9.766687e-04	ci right 1.353843e-03	k: 150	n:130000
Cons ci ratio: 1.651753e-04	ci left: 9.996796e-01	ci right 9.998506e-01	k: 129971	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
ZNF845   130000 perm   36 sec   (3615 perm/sec)   p_kst 7.692308e-06   p_cons 9.997769e-01   p_joint 1.153846e-03

Joint ci ratio: 3.126735e-01	ci left: 9.463656e-04	ci right 1.303386e-03	k: 156	n:140000
Cons ci ratio: 1.608638e-04	ci left: 9.996773e-01	ci right 9.998437e-01	k: 139968	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
ZNF845   140000 perm   39 sec   (3591 perm/sec)   p_kst 7.142857e-06   p_cons 9.997714e-01   p_joint 1.114286e-03

Joint ci ratio: 3.436566e-01	ci left: 7.180541e-04	ci right 1.021775e-03	k: 129	n:150000
Cons ci ratio: 1.632211e-04	ci left: 9.996523e-01	ci right 9.998207e-01	k: 149962	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
ZNF845   150000 perm   42 sec   (3568 perm/sec)   p_kst 6.666667e-06   p_cons 9.997467e-01   p_joint 8.600000e-04

Joint ci ratio: 3.607310e-01	ci left: 6.048000e-04	ci right 8.763203e-04	k: 117	n:160000
Cons ci ratio: 1.549686e-04	ci left: 9.996668e-01	ci right 9.998267e-01	k: 159961	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
ZNF845   160000 perm   45 sec   (3539 perm/sec)   p_kst 6.250000e-06   p_cons 9.997563e-01   p_joint 7.312500e-04

Joint ci ratio: 3.463508e-01	ci left: 6.228262e-04	ci right 8.887952e-04	k: 127	n:170000
Cons ci ratio: 1.564114e-04	ci left: 9.996458e-01	ci right 9.998069e-01	k: 169955	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
ZNF845   170000 perm   48 sec   (3509 perm/sec)   p_kst 5.882353e-06   p_cons 9.997353e-01   p_joint 7.470588e-04

Joint ci ratio: 3.562429e-01	ci left: 5.527629e-04	ci right 7.971179e-04	k: 120	n:180000
Cons ci ratio: 1.508989e-04	ci left: 9.996528e-01	ci right 9.998081e-01	k: 179953	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
ZNF845   180000 perm   52 sec   (3478 perm/sec)   p_kst 5.555556e-06   p_cons 9.997389e-01   p_joint 6.666667e-04

Joint ci ratio: 3.491046e-01	ci left: 5.476545e-04	ci right 7.838025e-04	k: 125	n:190000
Cons ci ratio: 1.473568e-04	ci left: 9.996531e-01	ci right 9.998047e-01	k: 189950	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
ZNF845   190000 perm   55 sec   (3447 perm/sec)   p_kst 5.263158e-06   p_cons 9.997368e-01   p_joint 6.578947e-04

Joint ci ratio: 3.463706e-01	ci left: 5.293975e-04	ci right 7.554840e-04	k: 127	n:200000
Cons ci ratio: 1.453757e-04	ci left: 9.996477e-01	ci right 9.997972e-01	k: 199946	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
ZNF845   200000 perm   59 sec   (3416 perm/sec)   p_kst 5.000000e-06   p_cons 9.997300e-01   p_joint 6.350000e-04

Joint ci ratio: 3.654409e-01	ci left: 4.478104e-04	ci right 6.521016e-04	k: 114	n:210000
Cons ci ratio: 1.421790e-04	ci left: 9.996483e-01	ci right 9.997944e-01	k: 209943	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
ZNF845   210000 perm   62 sec   (3383 perm/sec)   p_kst 4.761905e-06   p_cons 9.997286e-01   p_joint 5.428571e-04

Joint ci ratio: 3.824607e-01	ci left: 3.862683e-04	ci right 5.727596e-04	k: 104	n:220000
Cons ci ratio: 1.321582e-04	ci left: 9.996797e-01	ci right 9.998156e-01	k: 219946	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
ZNF845   220000 perm   66 sec   (3350 perm/sec)   p_kst 4.545455e-06   p_cons 9.997545e-01   p_joint 4.727273e-04

Joint ci ratio: 3.719793e-01	ci left: 3.930882e-04	ci right 5.764054e-04	k: 110	n:230000
Cons ci ratio: 1.309288e-04	ci left: 9.996740e-01	ci right 9.998085e-01	k: 229942	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
ZNF845   230000 perm   69 sec   (3315 perm/sec)   p_kst 4.347826e-06   p_cons 9.997478e-01   p_joint 4.782609e-04

Joint ci ratio: 3.548092e-01	ci left: 4.183612e-04	ci right 6.023852e-04	k: 121	n:240000
Cons ci ratio: 1.327095e-04	ci left: 9.996548e-01	ci right 9.997910e-01	k: 239935	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
ZNF845   240000 perm   73 sec   (3283 perm/sec)   p_kst 4.166667e-06   p_cons 9.997292e-01   p_joint 5.041667e-04

Joint ci ratio: 3.577588e-01	ci left: 3.943418e-04	ci right 5.695783e-04	k: 119	n:250000
Cons ci ratio: 1.293169e-04	ci left: 9.996597e-01	ci right 9.997923e-01	k: 249933	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
ZNF845   250000 perm   77 sec   (3252 perm/sec)   p_kst 4.000000e-06   p_cons 9.997320e-01   p_joint 4.760000e-04

Joint ci ratio: 3.533702e-01	ci left: 3.896825e-04	ci right 5.602367e-04	k: 122	n:260000
Cons ci ratio: 1.270565e-04	ci left: 9.996599e-01	ci right 9.997901e-01	k: 259930	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
ZNF845   260000 perm   81 sec   (3218 perm/sec)   p_kst 3.846154e-06   p_cons 9.997308e-01   p_joint 4.692308e-04

Joint ci ratio: 3.477613e-01	ci left: 3.887602e-04	ci right 5.556014e-04	k: 126	n:270000
Cons ci ratio: 1.249090e-04	ci left: 9.996601e-01	ci right 9.997881e-01	k: 269927	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
ZNF845   270000 perm   85 sec   (3184 perm/sec)   p_kst 3.703704e-06   p_cons 9.997296e-01   p_joint 4.666667e-04

Joint ci ratio: 3.577681e-01	ci left: 3.520895e-04	ci right 5.085546e-04	k: 119	n:280000
Cons ci ratio: 1.236608e-04	ci left: 9.996563e-01	ci right 9.997830e-01	k: 279923	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
ZNF845   280000 perm   89 sec   (3150 perm/sec)   p_kst 3.571429e-06   p_cons 9.997250e-01   p_joint 4.250000e-04

Joint ci ratio: 3.491449e-01	ci left: 3.588017e-04	ci right 5.135369e-04	k: 125	n:290000
Cons ci ratio: 1.201592e-04	ci left: 9.996643e-01	ci right 9.997874e-01	k: 289922	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
ZNF845   290000 perm   93 sec   (3116 perm/sec)   p_kst 3.448276e-06   p_cons 9.997310e-01   p_joint 4.310345e-04

Joint ci ratio: 3.450620e-01	ci left: 3.559698e-04	ci right 5.072876e-04	k: 128	n:300000
Cons ci ratio: 1.161534e-04	ci left: 9.996755e-01	ci right 9.997945e-01	k: 299922	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
ZNF845   300000 perm   97 sec   (3083 perm/sec)   p_kst 3.333333e-06   p_cons 9.997400e-01   p_joint 4.266667e-04

Joint ci ratio: 3.411190e-01	ci left: 3.533304e-04	ci right 5.014317e-04	k: 131	n:310000
Cons ci ratio: 1.138204e-04	ci left: 9.996788e-01	ci right 9.997954e-01	k: 309920	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
ZNF845   310000 perm   102 sec   (3050 perm/sec)   p_kst 3.225806e-06   p_cons 9.997419e-01   p_joint 4.225806e-04

Joint ci ratio: 3.360653e-01	ci left: 3.537262e-04	ci right 4.993208e-04	k: 135	n:320000
Cons ci ratio: 1.122870e-04	ci left: 9.996785e-01	ci right 9.997934e-01	k: 319917	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
ZNF845   320000 perm   106 sec   (3019 perm/sec)   p_kst 3.125000e-06   p_cons 9.997406e-01   p_joint 4.218750e-04

Joint ci ratio: 3.300525e-01	ci left: 3.568920e-04	ci right 5.006036e-04	k: 140	n:330000
Cons ci ratio: 1.095303e-04	ci left: 9.996849e-01	ci right 9.997970e-01	k: 329916	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
ZNF845   330000 perm   110 sec   (2987 perm/sec)   p_kst 3.030303e-06   p_cons 9.997455e-01   p_joint 4.242424e-04

Joint ci ratio: 3.424255e-01	ci left: 3.194645e-04	ci right 4.539968e-04	k: 130	n:340000
Cons ci ratio: 1.069321e-04	ci left: 9.996909e-01	ci right 9.998003e-01	k: 339915	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
ZNF845   340000 perm   115 sec   (2956 perm/sec)   p_kst 2.941176e-06   p_cons 9.997500e-01   p_joint 3.823529e-04

Joint ci ratio: 3.411274e-01	ci left: 3.129486e-04	ci right 4.441272e-04	k: 131	n:350000
Cons ci ratio: 1.062654e-04	ci left: 9.996871e-01	ci right 9.997958e-01	k: 349911	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
ZNF845   350000 perm   120 sec   (2927 perm/sec)   p_kst 2.857143e-06   p_cons 9.997457e-01   p_joint 3.742857e-04

Joint ci ratio: 3.424292e-01	ci left: 3.017159e-04	ci right 4.287756e-04	k: 130	n:360000
Cons ci ratio: 1.050215e-04	ci left: 9.996866e-01	ci right 9.997940e-01	k: 359908	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
ZNF845   360000 perm   124 sec   (2897 perm/sec)   p_kst 2.777778e-06   p_cons 9.997444e-01   p_joint 3.611111e-04

Joint ci ratio: 3.373179e-01	ci left: 3.034497e-04	ci right 4.289170e-04	k: 134	n:370000
Cons ci ratio: 1.027308e-04	ci left: 9.996921e-01	ci right 9.997971e-01	k: 369907	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
ZNF845   370000 perm   129 sec   (2868 perm/sec)   p_kst 2.702703e-06   p_cons 9.997486e-01   p_joint 3.621622e-04

Joint ci ratio: 3.411325e-01	ci left: 2.882415e-04	ci right 4.090657e-04	k: 131	n:380000
Cons ci ratio: 1.005578e-04	ci left: 9.996973e-01	ci right 9.998001e-01	k: 379906	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
ZNF845   380000 perm   134 sec   (2839 perm/sec)   p_kst 2.631579e-06   p_cons 9.997526e-01   p_joint 3.447368e-04

Joint ci ratio: 3.670875e-01	ci left: 2.387955e-04	ci right 3.483415e-04	k: 113	n:390000
Cons ci ratio: 9.900533e-05	ci left: 9.996994e-01	ci right 9.998006e-01	k: 389904	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
ZNF845   390000 perm   139 sec   (2811 perm/sec)   p_kst 2.564103e-06   p_cons 9.997538e-01   p_joint 2.897436e-04

Joint ci ratio: 3.825021e-01	ci left: 2.124436e-04	ci right 3.150248e-04	k: 104	n:400000
Cons ci ratio: 9.850060e-05	ci left: 9.996959e-01	ci right 9.997966e-01	k: 399900	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
ZNF845   400000 perm   144 sec   (2782 perm/sec)   p_kst 2.500000e-06   p_cons 9.997500e-01   p_joint 2.600000e-04

Joint ci ratio: 3.806944e-01	ci left: 2.094671e-04	ci right 3.100134e-04	k: 105	n:410000
Cons ci ratio: 9.844840e-05	ci left: 9.996900e-01	ci right 9.997905e-01	k: 409895	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
ZNF845   410000 perm   149 sec   (2755 perm/sec)   p_kst 2.439024e-06   p_cons 9.997439e-01   p_joint 2.560976e-04

Joint ci ratio: 3.789120e-01	ci left: 2.066333e-04	ci right 3.052394e-04	k: 106	n:420000
Cons ci ratio: 9.745493e-05	ci left: 9.996895e-01	ci right 9.997891e-01	k: 419892	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
ZNF845   420000 perm   154 sec   (2728 perm/sec)   p_kst 2.380952e-06   p_cons 9.997429e-01   p_joint 2.523810e-04

Joint ci ratio: 3.771544e-01	ci left: 2.039324e-04	ci right 3.006865e-04	k: 107	n:430000
Cons ci ratio: 9.562402e-05	ci left: 9.996942e-01	ci right 9.997919e-01	k: 429891	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
ZNF845   430000 perm   159 sec   (2702 perm/sec)   p_kst 2.325581e-06   p_cons 9.997465e-01   p_joint 2.488372e-04

Joint ci ratio: 3.843418e-01	ci left: 1.910765e-04	ci right 2.838962e-04	k: 103	n:440000
Cons ci ratio: 8.405622e-05	ci left: 9.997536e-01	ci right 9.998396e-01	k: 439912	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
ZNF845   440000 perm   165 sec   (2674 perm/sec)   p_kst 2.272727e-06   p_cons 9.998000e-01   p_joint 2.340909e-04

Joint ci ratio: 4.086460e-01	ci left: 1.628197e-04	ci right 2.482784e-04	k: 91	n:450000
Cons ci ratio: 8.310665e-05	ci left: 9.997542e-01	ci right 9.998392e-01	k: 449910	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
ZNF845   450000 perm   170 sec   (2645 perm/sec)   p_kst 2.222222e-06   p_cons 9.998000e-01   p_joint 2.022222e-04

Joint ci ratio: 4.251440e-01	ci left: 1.456584e-04	ci right 2.260771e-04	k: 84	n:460000
Cons ci ratio: 8.218854e-05	ci left: 9.997547e-01	ci right 9.998388e-01	k: 459908	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
ZNF845   460000 perm   176 sec   (2612 perm/sec)   p_kst 2.173913e-06   p_cons 9.998000e-01   p_joint 1.826087e-04

Joint ci ratio: 4.226653e-01	ci left: 1.444599e-04	ci right 2.236204e-04	k: 85	n:470000
Cons ci ratio: 8.043968e-05	ci left: 9.997599e-01	ci right 9.998422e-01	k: 469908	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
ZNF845   470000 perm   181 sec   (2590 perm/sec)   p_kst 2.127660e-06   p_cons 9.998043e-01   p_joint 1.808511e-04

Joint ci ratio: 4.202296e-01	ci left: 1.433126e-04	ci right 2.212647e-04	k: 86	n:480000
Cons ci ratio: 7.876370e-05	ci left: 9.997649e-01	ci right 9.998455e-01	k: 479908	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
ZNF845   480000 perm   187 sec   (2568 perm/sec)   p_kst 2.083333e-06   p_cons 9.998083e-01   p_joint 1.791667e-04

Joint ci ratio: 4.154810e-01	ci left: 1.440403e-04	ci right 2.212576e-04	k: 88	n:490000
Cons ci ratio: 7.879826e-05	ci left: 9.997608e-01	ci right 9.998413e-01	k: 489904	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
ZNF845   490000 perm   192 sec   (2547 perm/sec)   p_kst 2.040816e-06   p_cons 9.998041e-01   p_joint 1.795918e-04

Joint ci ratio: 4.438175e-01	ci left: 1.215362e-04	ci right 1.924699e-04	k: 77	n:500000
Cons ci ratio: 7.840745e-05	ci left: 9.997589e-01	ci right 9.998391e-01	k: 499901	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
ZNF845   500000 perm   198 sec   (2524 perm/sec)   p_kst 2.000000e-06   p_cons 9.998020e-01   p_joint 1.540000e-04

Joint ci ratio: 4.409999e-01	ci left: 1.208955e-04	ci right 1.908739e-04	k: 78	n:510000
Cons ci ratio: 7.801466e-05	ci left: 9.997572e-01	ci right 9.998369e-01	k: 509898	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
ZNF845   510000 perm   204 sec   (2499 perm/sec)   p_kst 1.960784e-06   p_cons 9.998000e-01   p_joint 1.529412e-04

Joint ci ratio: 4.328570e-01	ci left: 1.237051e-04	ci right 1.936033e-04	k: 81	n:520000
Cons ci ratio: 7.651424e-05	ci left: 9.997619e-01	ci right 9.998401e-01	k: 519898	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
ZNF845   520000 perm   210 sec   (2478 perm/sec)   p_kst 1.923077e-06   p_cons 9.998038e-01   p_joint 1.557692e-04

Joint ci ratio: 4.328577e-01	ci left: 1.213710e-04	ci right 1.899504e-04	k: 81	n:530000
Cons ci ratio: 7.579592e-05	ci left: 9.997622e-01	ci right 9.998397e-01	k: 529896	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
ZNF845   530000 perm   216 sec   (2458 perm/sec)   p_kst 1.886792e-06   p_cons 9.998038e-01   p_joint 1.528302e-04

Joint ci ratio: 4.251498e-01	ci left: 1.240790e-04	ci right 1.925848e-04	k: 84	n:540000
Cons ci ratio: 7.439216e-05	ci left: 9.997666e-01	ci right 9.998426e-01	k: 539896	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
ZNF845   540000 perm   221 sec   (2438 perm/sec)   p_kst 1.851852e-06   p_cons 9.998074e-01   p_joint 1.555556e-04

Joint ci ratio: 4.251505e-01	ci left: 1.218230e-04	ci right 1.890833e-04	k: 84	n:550000
Cons ci ratio: 7.441795e-05	ci left: 9.997629e-01	ci right 9.998389e-01	k: 549892	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
ZNF845   550000 perm   227 sec   (2419 perm/sec)   p_kst 1.818182e-06   p_cons 9.998036e-01   p_joint 1.527273e-04

Joint ci ratio: 4.251510e-01	ci left: 1.196476e-04	ci right 1.857069e-04	k: 84	n:560000
Cons ci ratio: 7.342350e-05	ci left: 9.997652e-01	ci right 9.998402e-01	k: 559891	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
ZNF845   560000 perm   233 sec   (2399 perm/sec)   p_kst 1.785714e-06   p_cons 9.998054e-01   p_joint 1.500000e-04

Joint ci ratio: 4.226722e-01	ci left: 1.191157e-04	ci right 1.843894e-04	k: 85	n:570000
Cons ci ratio: 7.246246e-05	ci left: 9.997674e-01	ci right 9.998414e-01	k: 569890	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
ZNF845   570000 perm   240 sec   (2376 perm/sec)   p_kst 1.754386e-06   p_cons 9.998070e-01   p_joint 1.491228e-04

Joint ci ratio: 4.178413e-01	ci left: 1.201455e-04	ci right 1.850212e-04	k: 87	n:580000
Cons ci ratio: 7.153312e-05	ci left: 9.997695e-01	ci right 9.998426e-01	k: 579889	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
ZNF845   580000 perm   246 sec   (2358 perm/sec)   p_kst 1.724138e-06   p_cons 9.998086e-01   p_joint 1.500000e-04

Joint ci ratio: 4.178419e-01	ci left: 1.181091e-04	ci right 1.818853e-04	k: 87	n:590000
Cons ci ratio: 7.063387e-05	ci left: 9.997716e-01	ci right 9.998437e-01	k: 589888	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
ZNF845   590000 perm   252 sec   (2338 perm/sec)   p_kst 1.694915e-06   p_cons 9.998102e-01   p_joint 1.474576e-04

Joint ci ratio: 4.154880e-01	ci left: 1.176326e-04	ci right 1.806944e-04	k: 88	n:600000
Cons ci ratio: 6.976325e-05	ci left: 9.997736e-01	ci right 9.998448e-01	k: 599887	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
ZNF845   600000 perm   259 sec   (2319 perm/sec)   p_kst 1.666667e-06   p_cons 9.998117e-01   p_joint 1.466667e-04

Joint ci ratio: 4.202378e-01	ci left: 1.127702e-04	ci right 1.741107e-04	k: 86	n:610000
Cons ci ratio: 6.981319e-05	ci left: 9.997701e-01	ci right 9.998414e-01	k: 609883	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
ZNF845   610000 perm   265 sec   (2300 perm/sec)   p_kst 1.639344e-06   p_cons 9.998082e-01   p_joint 1.409836e-04

Joint ci ratio: 4.154890e-01	ci left: 1.138379e-04	ci right 1.748656e-04	k: 88	n:620000
Cons ci ratio: 6.926683e-05	ci left: 9.997703e-01	ci right 9.998410e-01	k: 619881	n:620000
KS ci ratio: 2.263206e+00	ci left: 3.906604e-07	ci right 1.165267e-05	k: 2	n:620000
ZNF845   620000 perm   272 sec   (2282 perm/sec)   p_kst 3.225806e-06   p_cons 9.998081e-01   p_joint 1.419355e-04

Joint ci ratio: 4.154895e-01	ci left: 1.120309e-04	ci right 1.720900e-04	k: 88	n:630000
Cons ci ratio: 6.873307e-05	ci left: 9.997705e-01	ci right 9.998406e-01	k: 629879	n:630000
KS ci ratio: 2.263206e+00	ci left: 3.844594e-07	ci right 1.146771e-05	k: 2	n:630000
ZNF845   630000 perm   278 sec   (2263 perm/sec)   p_kst 3.174603e-06   p_cons 9.998079e-01   p_joint 1.396825e-04

Joint ci ratio: 4.131749e-01	ci left: 1.116800e-04	ci right 1.711256e-04	k: 89	n:640000
Cons ci ratio: 6.765902e-05	ci left: 9.997741e-01	ci right 9.998431e-01	k: 639879	n:640000
KS ci ratio: 2.263206e+00	ci left: 3.784522e-07	ci right 1.128853e-05	k: 2	n:640000
ZNF845   640000 perm   285 sec   (2245 perm/sec)   p_kst 3.125000e-06   p_cons 9.998109e-01   p_joint 1.390625e-04

Joint ci ratio: 4.108986e-01	ci left: 1.113409e-04	ci right 1.701900e-04	k: 90	n:650000
Cons ci ratio: 6.716195e-05	ci left: 9.997742e-01	ci right 9.998427e-01	k: 649877	n:650000
KS ci ratio: 2.263206e+00	ci left: 3.726299e-07	ci right 1.111486e-05	k: 2	n:650000
ZNF845   650000 perm   292 sec   (2225 perm/sec)   p_kst 3.076923e-06   p_cons 9.998108e-01   p_joint 1.384615e-04

Joint ci ratio: 4.108990e-01	ci left: 1.096538e-04	ci right 1.676114e-04	k: 90	n:660000
Cons ci ratio: 6.720283e-05	ci left: 9.997711e-01	ci right 9.998396e-01	k: 659873	n:660000
KS ci ratio: 2.263206e+00	ci left: 3.669840e-07	ci right 1.094645e-05	k: 2	n:660000
ZNF845   660000 perm   299 sec   (2207 perm/sec)   p_kst 3.030303e-06   p_cons 9.998076e-01   p_joint 1.363636e-04

Joint ci ratio: 4.108994e-01	ci left: 1.080172e-04	ci right 1.651098e-04	k: 90	n:670000
Cons ci ratio: 6.619971e-05	ci left: 9.997745e-01	ci right 9.998420e-01	k: 669873	n:670000
KS ci ratio: 2.263206e+00	ci left: 3.615066e-07	ci right 1.078307e-05	k: 2	n:670000
ZNF845   670000 perm   306 sec   (2188 perm/sec)   p_kst 2.985075e-06   p_cons 9.998104e-01   p_joint 1.343284e-04

Joint ci ratio: 4.086603e-01	ci left: 1.077477e-04	ci right 1.643031e-04	k: 91	n:680000
Cons ci ratio: 6.522610e-05	ci left: 9.997778e-01	ci right 9.998443e-01	k: 679873	n:680000
KS ci ratio: 2.263206e+00	ci left: 3.561903e-07	ci right 1.062450e-05	k: 2	n:680000
ZNF845   680000 perm   313 sec   (2171 perm/sec)   p_kst 2.941176e-06   p_cons 9.998132e-01   p_joint 1.338235e-04

Joint ci ratio: 4.064574e-01	ci left: 1.074868e-04	ci right 1.635190e-04	k: 92	n:690000
Cons ci ratio: 6.428071e-05	ci left: 9.997810e-01	ci right 9.998466e-01	k: 689873	n:690000
KS ci ratio: 2.263206e+00	ci left: 3.510281e-07	ci right 1.047052e-05	k: 2	n:690000
ZNF845   690000 perm   320 sec   (2154 perm/sec)   p_kst 2.898551e-06   p_cons 9.998159e-01   p_joint 1.333333e-04

Joint ci ratio: 4.042897e-01	ci left: 1.072342e-04	ci right 1.627565e-04	k: 93	n:700000
Cons ci ratio: 6.336233e-05	ci left: 9.997841e-01	ci right 9.998487e-01	k: 699873	n:700000
KS ci ratio: 2.263207e+00	ci left: 3.460134e-07	ci right 1.032094e-05	k: 2	n:700000
ZNF845   700000 perm   328 sec   (2136 perm/sec)   p_kst 2.857143e-06   p_cons 9.998186e-01   p_joint 1.328571e-04

Joint ci ratio: 4.021563e-01	ci left: 1.069894e-04	ci right 1.620148e-04	k: 94	n:710000
Cons ci ratio: 6.319779e-05	ci left: 9.997826e-01	ci right 9.998470e-01	k: 709870	n:710000
KS ci ratio: 2.263207e+00	ci left: 3.411400e-07	ci right 1.017558e-05	k: 2	n:710000
ZNF845   710000 perm   335 sec   (2121 perm/sec)   p_kst 2.816901e-06   p_cons 9.998169e-01   p_joint 1.323944e-04

Joint ci ratio: 4.021567e-01	ci left: 1.055034e-04	ci right 1.597646e-04	k: 94	n:720000
Cons ci ratio: 6.231997e-05	ci left: 9.997856e-01	ci right 9.998491e-01	k: 719870	n:720000
KS ci ratio: 2.263207e+00	ci left: 3.364020e-07	ci right 1.003425e-05	k: 2	n:720000
ZNF845   720000 perm   342 sec   (2103 perm/sec)   p_kst 2.777778e-06   p_cons 9.998194e-01   p_joint 1.305556e-04

Joint ci ratio: 4.000567e-01	ci left: 1.052898e-04	ci right 1.590834e-04	k: 95	n:730000
Cons ci ratio: 6.216615e-05	ci left: 9.997841e-01	ci right 9.998475e-01	k: 729867	n:730000
KS ci ratio: 2.263207e+00	ci left: 3.317937e-07	ci right 9.896797e-06	k: 2	n:730000
ZNF845   730000 perm   350 sec   (2087 perm/sec)   p_kst 2.739726e-06   p_cons 9.998178e-01   p_joint 1.301370e-04

Joint ci ratio: 4.000571e-01	ci left: 1.038670e-04	ci right 1.569337e-04	k: 95	n:740000
Cons ci ratio: 6.132600e-05	ci left: 9.997870e-01	ci right 9.998495e-01	k: 739867	n:740000
KS ci ratio: 2.263207e+00	ci left: 3.273100e-07	ci right 9.763057e-06	k: 2	n:740000
ZNF845   740000 perm   357 sec   (2071 perm/sec)   p_kst 2.702703e-06   p_cons 9.998203e-01   p_joint 1.283784e-04

Joint ci ratio: 4.109025e-01	ci left: 9.649524e-05	ci right 1.474983e-04	k: 90	n:750000
Cons ci ratio: 6.073364e-05	ci left: 9.997884e-01	ci right 9.998503e-01	k: 749866	n:750000
KS ci ratio: 2.263207e+00	ci left: 3.229459e-07	ci right 9.632883e-06	k: 2	n:750000
ZNF845   750000 perm   365 sec   (2053 perm/sec)   p_kst 2.666667e-06   p_cons 9.998213e-01   p_joint 1.200000e-04

Joint ci ratio: 4.086632e-01	ci left: 9.640570e-05	ci right 1.470083e-04	k: 91	n:760000
Cons ci ratio: 6.059685e-05	ci left: 9.997869e-01	ci right 9.998487e-01	k: 759863	n:760000
KS ci ratio: 2.263207e+00	ci left: 3.186966e-07	ci right 9.506135e-06	k: 2	n:760000
ZNF845   760000 perm   373 sec   (2038 perm/sec)   p_kst 2.631579e-06   p_cons 9.998197e-01   p_joint 1.197368e-04

Joint ci ratio: 4.042922e-01	ci left: 9.748549e-05	ci right 1.479607e-04	k: 93	n:770000
Cons ci ratio: 6.024173e-05	ci left: 9.997869e-01	ci right 9.998482e-01	k: 769861	n:770000
KS ci ratio: 2.263207e+00	ci left: 3.145577e-07	ci right 9.382679e-06	k: 2	n:770000
ZNF845   770000 perm   381 sec   (2022 perm/sec)   p_kst 2.597403e-06   p_cons 9.998195e-01   p_joint 1.207792e-04

Joint ci ratio: 4.042925e-01	ci left: 9.623566e-05	ci right 1.460638e-04	k: 93	n:780000
Cons ci ratio: 5.946933e-05	ci left: 9.997896e-01	ci right 9.998502e-01	k: 779861	n:780000
KS ci ratio: 2.263207e+00	ci left: 3.105249e-07	ci right 9.262389e-06	k: 2	n:780000
ZNF845   780000 perm   388 sec   (2008 perm/sec)   p_kst 2.564103e-06   p_cons 9.998218e-01   p_joint 1.192308e-04

Joint ci ratio: 4.021591e-01	ci left: 9.615492e-05	ci right 1.456084e-04	k: 94	n:790000
Cons ci ratio: 5.913448e-05	ci left: 9.997895e-01	ci right 9.998498e-01	k: 789859	n:790000
KS ci ratio: 2.263207e+00	ci left: 3.065942e-07	ci right 9.145144e-06	k: 2	n:790000
ZNF845   790000 perm   396 sec   (1994 perm/sec)   p_kst 2.531646e-06   p_cons 9.998215e-01   p_joint 1.189873e-04

Joint ci ratio: 3.959553e-01	ci left: 9.832665e-05	ci right 1.479127e-04	k: 97	n:800000
Cons ci ratio: 5.900898e-05	ci left: 9.997881e-01	ci right 9.998482e-01	k: 799856	n:800000
KS ci ratio: 2.263207e+00	ci left: 3.027617e-07	ci right 9.030830e-06	k: 2	n:800000
ZNF845   800000 perm   404 sec   (1980 perm/sec)   p_kst 2.500000e-06   p_cons 9.998200e-01   p_joint 1.212500e-04

Joint ci ratio: 3.919756e-01	ci left: 9.933727e-05	ci right 1.487992e-04	k: 99	n:810000
Cons ci ratio: 5.888033e-05	ci left: 9.997867e-01	ci right 9.998467e-01	k: 809853	n:810000
KS ci ratio: 2.263207e+00	ci left: 2.990239e-07	ci right 8.919339e-06	k: 2	n:810000
ZNF845   810000 perm   412 sec   (1966 perm/sec)   p_kst 2.469136e-06   p_cons 9.998185e-01   p_joint 1.222222e-04

Joint ci ratio: 3.862246e-01	ci left: 1.014265e-04	ci right 1.509993e-04	k: 102	n:820000
Cons ci ratio: 5.855396e-05	ci left: 9.997867e-01	ci right 9.998463e-01	k: 819851	n:820000
KS ci ratio: 2.263208e+00	ci left: 2.953773e-07	ci right 8.810567e-06	k: 2	n:820000
ZNF845   820000 perm   421 sec   (1950 perm/sec)   p_kst 2.439024e-06   p_cons 9.998183e-01   p_joint 1.243902e-04

Joint ci ratio: 3.900306e-01	ci left: 9.802995e-05	ci right 1.465364e-04	k: 100	n:830000
Cons ci ratio: 5.804097e-05	ci left: 9.997879e-01	ci right 9.998470e-01	k: 829850	n:830000
KS ci ratio: 2.263208e+00	ci left: 2.918185e-07	ci right 8.704416e-06	k: 2	n:830000
ZNF845   830000 perm   429 sec   (1936 perm/sec)   p_kst 2.409639e-06   p_cons 9.998193e-01   p_joint 1.204819e-04

Joint ci ratio: 3.881140e-01	ci left: 9.793694e-05	ci right 1.460983e-04	k: 101	n:840000
Cons ci ratio: 5.734994e-05	ci left: 9.997905e-01	ci right 9.998489e-01	k: 839850	n:840000
KS ci ratio: 2.263208e+00	ci left: 2.883445e-07	ci right 8.600792e-06	k: 2	n:840000
ZNF845   840000 perm   437 sec   (1923 perm/sec)   p_kst 2.380952e-06   p_cons 9.998214e-01   p_joint 1.202381e-04

Joint ci ratio: 3.881143e-01	ci left: 9.678473e-05	ci right 1.443795e-04	k: 101	n:850000
Cons ci ratio: 5.704935e-05	ci left: 9.997904e-01	ci right 9.998485e-01	k: 849848	n:850000
KS ci ratio: 2.263208e+00	ci left: 2.849522e-07	ci right 8.499606e-06	k: 2	n:850000
ZNF845   850000 perm   445 sec   (1911 perm/sec)   p_kst 2.352941e-06   p_cons 9.998212e-01   p_joint 1.188235e-04

Joint ci ratio: 3.862257e-01	ci left: 9.670892e-05	ci right 1.439761e-04	k: 102	n:860000
Cons ci ratio: 5.656992e-05	ci left: 9.997916e-01	ci right 9.998492e-01	k: 859847	n:860000
KS ci ratio: 2.263208e+00	ci left: 2.816388e-07	ci right 8.400774e-06	k: 2	n:860000
ZNF845   860000 perm   453 sec   (1898 perm/sec)   p_kst 2.325581e-06   p_cons 9.998221e-01   p_joint 1.186047e-04

Joint ci ratio: 3.862260e-01	ci left: 9.559731e-05	ci right 1.423213e-04	k: 102	n:870000
Cons ci ratio: 5.610094e-05	ci left: 9.997927e-01	ci right 9.998498e-01	k: 869846	n:870000
KS ci ratio: 2.263208e+00	ci left: 2.784016e-07	ci right 8.304214e-06	k: 2	n:870000
ZNF845   870000 perm   462 sec   (1884 perm/sec)   p_kst 2.298851e-06   p_cons 9.998230e-01   p_joint 1.172414e-04

Joint ci ratio: 3.825298e-01	ci left: 9.656410e-05	ci right 1.431953e-04	k: 104	n:880000
Cons ci ratio: 5.564203e-05	ci left: 9.997939e-01	ci right 9.998505e-01	k: 879845	n:880000
KS ci ratio: 2.263208e+00	ci left: 2.752379e-07	ci right 8.209848e-06	k: 2	n:880000
ZNF845   880000 perm   470 sec   (1872 perm/sec)   p_kst 2.272727e-06   p_cons 9.998239e-01   p_joint 1.181818e-04

Joint ci ratio: 3.825300e-01	ci left: 9.547910e-05	ci right 1.415863e-04	k: 104	n:890000
Cons ci ratio: 5.589167e-05	ci left: 9.997901e-01	ci right 9.998470e-01	k: 889840	n:890000
KS ci ratio: 2.263208e+00	ci left: 2.721454e-07	ci right 8.117603e-06	k: 2	n:890000
ZNF845   890000 perm   479 sec   (1859 perm/sec)   p_kst 2.247191e-06   p_cons 9.998202e-01   p_joint 1.168539e-04

Joint ci ratio: 3.807214e-01	ci left: 9.542274e-05	ci right 1.412304e-04	k: 105	n:900000
Cons ci ratio: 5.561289e-05	ci left: 9.997901e-01	ci right 9.998466e-01	k: 899838	n:900000
KS ci ratio: 2.263208e+00	ci left: 2.691215e-07	ci right 8.027407e-06	k: 2	n:900000
ZNF845   900000 perm   488 sec   (1846 perm/sec)   p_kst 2.222222e-06   p_cons 9.998200e-01   p_joint 1.166667e-04

Joint ci ratio: 3.771796e-01	ci left: 9.636260e-05	ci right 1.420846e-04	k: 107	n:910000
Cons ci ratio: 5.533817e-05	ci left: 9.997900e-01	ci right 9.998463e-01	k: 909836	n:910000
KS ci ratio: 2.263208e+00	ci left: 2.661642e-07	ci right 7.939194e-06	k: 2	n:910000
ZNF845   910000 perm   496 sec   (1834 perm/sec)   p_kst 2.197802e-06   p_cons 9.998198e-01   p_joint 1.175824e-04

Joint ci ratio: 3.771798e-01	ci left: 9.531517e-05	ci right 1.405402e-04	k: 107	n:920000
Cons ci ratio: 5.473662e-05	ci left: 9.997923e-01	ci right 9.998480e-01	k: 919836	n:920000
KS ci ratio: 2.263208e+00	ci left: 2.632711e-07	ci right 7.852899e-06	k: 2	n:920000
ZNF845   920000 perm   505 sec   (1822 perm/sec)   p_kst 2.173913e-06   p_cons 9.998217e-01   p_joint 1.163043e-04

Joint ci ratio: 3.771801e-01	ci left: 9.429026e-05	ci right 1.390290e-04	k: 107	n:930000
Cons ci ratio: 5.447524e-05	ci left: 9.997922e-01	ci right 9.998476e-01	k: 929834	n:930000
KS ci ratio: 2.263208e+00	ci left: 2.604402e-07	ci right 7.768460e-06	k: 2	n:930000
ZNF845   930000 perm   514 sec   (1809 perm/sec)   p_kst 2.150538e-06   p_cons 9.998215e-01   p_joint 1.150538e-04

Joint ci ratio: 3.754459e-01	ci left: 9.425038e-05	ci right 1.387140e-04	k: 108	n:940000
Cons ci ratio: 5.389567e-05	ci left: 9.997944e-01	ci right 9.998492e-01	k: 939834	n:940000
KS ci ratio: 2.263208e+00	ci left: 2.576695e-07	ci right 7.685817e-06	k: 2	n:940000
ZNF845   940000 perm   523 sec   (1797 perm/sec)   p_kst 2.127660e-06   p_cons 9.998234e-01   p_joint 1.148936e-04

Joint ci ratio: 3.737355e-01	ci left: 9.421180e-05	ci right 1.384051e-04	k: 109	n:950000
Cons ci ratio: 5.332830e-05	ci left: 9.997966e-01	ci right 9.998508e-01	k: 949834	n:950000
KS ci ratio: 2.263208e+00	ci left: 2.549572e-07	ci right 7.604913e-06	k: 2	n:950000
ZNF845   950000 perm   532 sec   (1786 perm/sec)   p_kst 2.105263e-06   p_cons 9.998253e-01   p_joint 1.147368e-04

Joint ci ratio: 3.771808e-01	ci left: 9.134367e-05	ci right 1.346844e-04	k: 107	n:960000
Cons ci ratio: 5.277275e-05	ci left: 9.997987e-01	ci right 9.998524e-01	k: 959834	n:960000
KS ci ratio: 2.263208e+00	ci left: 2.523014e-07	ci right 7.525696e-06	k: 2	n:960000
ZNF845   960000 perm   541 sec   (1775 perm/sec)   p_kst 2.083333e-06   p_cons 9.998271e-01   p_joint 1.114583e-04

Joint ci ratio: 3.771810e-01	ci left: 9.040197e-05	ci right 1.332959e-04	k: 107	n:970000
Cons ci ratio: 5.238482e-05	ci left: 9.997997e-01	ci right 9.998530e-01	k: 969833	n:970000
KS ci ratio: 2.263208e+00	ci left: 2.497004e-07	ci right 7.448112e-06	k: 2	n:970000
ZNF845   970000 perm   550 sec   (1763 perm/sec)   p_kst 2.061856e-06   p_cons 9.998278e-01   p_joint 1.103093e-04

Joint ci ratio: 3.771812e-01	ci left: 8.947949e-05	ci right 1.319358e-04	k: 107	n:980000
Cons ci ratio: 5.185024e-05	ci left: 9.998017e-01	ci right 9.998545e-01	k: 979833	n:980000
KS ci ratio: 2.263208e+00	ci left: 2.471524e-07	ci right 7.372111e-06	k: 2	n:980000
ZNF845   980000 perm   560 sec   (1752 perm/sec)   p_kst 2.040816e-06   p_cons 9.998296e-01   p_joint 1.091837e-04

Joint ci ratio: 3.720489e-01	ci left: 9.132068e-05	ci right 1.339174e-04	k: 110	n:990000
Cons ci ratio: 5.163112e-05	ci left: 9.998015e-01	ci right 9.998541e-01	k: 989831	n:990000
KS ci ratio: 2.263208e+00	ci left: 2.446559e-07	ci right 7.297645e-06	k: 2	n:990000
ZNF845   990000 perm   569 sec   (1741 perm/sec)   p_kst 2.020202e-06   p_cons 9.998293e-01   p_joint 1.111111e-04

Joint ci ratio: 3.703843e-01	ci left: 9.131418e-05	ci right 1.336711e-04	k: 111	n:1000000
Cons ci ratio: 5.126491e-05	ci left: 9.998024e-01	ci right 9.998546e-01	k: 999830	n:1000000
KS ci ratio: 2.263209e+00	ci left: 2.422094e-07	ci right 7.224669e-06	k: 2	n:1000000
ZNF845   1000000 perm   579 sec   (1727 perm/sec)   p_kst 2.000000e-06   p_cons 9.998300e-01   p_joint 1.110000e-04

Joint ci ratio: 3.671207e-01	ci left: 9.220680e-05	ci right 1.345105e-04	k: 113	n:1010000
Cons ci ratio: 5.105331e-05	ci left: 9.998023e-01	ci right 9.998542e-01	k: 1009828	n:1010000
KS ci ratio: 2.263209e+00	ci left: 2.398113e-07	ci right 7.153138e-06	k: 2	n:1010000
ZNF845   1010000 perm   589 sec   (1716 perm/sec)   p_kst 1.980198e-06   p_cons 9.998297e-01   p_joint 1.118812e-04

Joint ci ratio: 3.639420e-01	ci left: 9.308351e-05	ci right 1.353319e-04	k: 115	n:1020000
Cons ci ratio: 5.113393e-05	ci left: 9.998000e-01	ci right 9.998520e-01	k: 1019824	n:1020000
KS ci ratio: 2.263209e+00	ci left: 2.374602e-07	ci right 7.083009e-06	k: 2	n:1020000
ZNF845   1020000 perm   599 sec   (1704 perm/sec)   p_kst 1.960784e-06   p_cons 9.998275e-01   p_joint 1.127451e-04

Joint ci ratio: 3.639422e-01	ci left: 9.217978e-05	ci right 1.340180e-04	k: 115	n:1030000
Cons ci ratio: 5.092277e-05	ci left: 9.997999e-01	ci right 9.998516e-01	k: 1029822	n:1030000
KS ci ratio: 2.263209e+00	ci left: 2.351547e-07	ci right 7.014242e-06	k: 2	n:1030000
ZNF845   1030000 perm   609 sec   (1693 perm/sec)   p_kst 1.941748e-06   p_cons 9.998272e-01   p_joint 1.116505e-04

Joint ci ratio: 3.578246e-01	ci left: 9.479092e-05	ci right 1.369227e-04	k: 119	n:1040000
Cons ci ratio: 5.057379e-05	ci left: 9.998007e-01	ci right 9.998522e-01	k: 1039821	n:1040000
KS ci ratio: 2.263209e+00	ci left: 2.328936e-07	ci right 6.946798e-06	k: 2	n:1040000
ZNF845   1040000 perm   618 sec   (1682 perm/sec)   p_kst 1.923077e-06   p_cons 9.998279e-01   p_joint 1.144231e-04

Joint ci ratio: 3.578248e-01	ci left: 9.388814e-05	ci right 1.356187e-04	k: 119	n:1050000
Cons ci ratio: 5.009210e-05	ci left: 9.998026e-01	ci right 9.998536e-01	k: 1049821	n:1050000
KS ci ratio: 2.263209e+00	ci left: 2.306756e-07	ci right 6.880638e-06	k: 2	n:1050000
ZNF845   1050000 perm   628 sec   (1672 perm/sec)   p_kst 1.904762e-06   p_cons 9.998295e-01   p_joint 1.133333e-04

Joint ci ratio: 3.593255e-01	ci left: 9.214397e-05	ci right 1.333113e-04	k: 118	n:1060000
Cons ci ratio: 4.989444e-05	ci left: 9.998025e-01	ci right 9.998532e-01	k: 1059819	n:1060000
KS ci ratio: 2.263209e+00	ci left: 2.284994e-07	ci right 6.815726e-06	k: 2	n:1060000
ZNF845   1060000 perm   638 sec   (1662 perm/sec)   p_kst 1.886792e-06   p_cons 9.998292e-01   p_joint 1.113208e-04

Joint ci ratio: 3.608452e-01	ci left: 9.043276e-05	ci right 1.310466e-04	k: 117	n:1070000
Cons ci ratio: 4.956373e-05	ci left: 9.998033e-01	ci right 9.998537e-01	k: 1069818	n:1070000
KS ci ratio: 2.263209e+00	ci left: 2.263639e-07	ci right 6.752028e-06	k: 2	n:1070000
ZNF845   1070000 perm   648 sec   (1652 perm/sec)   p_kst 1.869159e-06   p_cons 9.998299e-01   p_joint 1.093458e-04

Joint ci ratio: 3.593258e-01	ci left: 9.043759e-05	ci right 1.308426e-04	k: 118	n:1080000
Cons ci ratio: 4.937241e-05	ci left: 9.998032e-01	ci right 9.998534e-01	k: 1079816	n:1080000
KS ci ratio: 2.263209e+00	ci left: 2.242679e-07	ci right 6.689509e-06	k: 2	n:1080000
ZNF845   1080000 perm   658 sec   (1641 perm/sec)   p_kst 1.851852e-06   p_cons 9.998296e-01   p_joint 1.092593e-04

Joint ci ratio: 3.534344e-01	ci left: 9.294912e-05	ci right 1.336391e-04	k: 122	n:1090000
Cons ci ratio: 4.918318e-05	ci left: 9.998030e-01	ci right 9.998530e-01	k: 1089814	n:1090000
KS ci ratio: 2.263209e+00	ci left: 2.222104e-07	ci right 6.628138e-06	k: 2	n:1090000
ZNF845   1090000 perm   668 sec   (1631 perm/sec)   p_kst 1.834862e-06   p_cons 9.998294e-01   p_joint 1.119266e-04

Joint ci ratio: 3.534346e-01	ci left: 9.210412e-05	ci right 1.324242e-04	k: 122	n:1100000
Cons ci ratio: 4.886619e-05	ci left: 9.998038e-01	ci right 9.998535e-01	k: 1099813	n:1100000
KS ci ratio: 2.263209e+00	ci left: 2.201903e-07	ci right 6.567882e-06	k: 2	n:1100000
ZNF845   1100000 perm   678 sec   (1622 perm/sec)   p_kst 1.818182e-06   p_cons 9.998300e-01   p_joint 1.109091e-04

Joint ci ratio: 3.505956e-01	ci left: 9.291685e-05	ci right 1.331916e-04	k: 124	n:1110000
Cons ci ratio: 4.855456e-05	ci left: 9.998046e-01	ci right 9.998540e-01	k: 1109812	n:1110000
KS ci ratio: 2.263209e+00	ci left: 2.182066e-07	ci right 6.508712e-06	k: 2	n:1110000
ZNF845   1110000 perm   689 sec   (1612 perm/sec)   p_kst 1.801802e-06   p_cons 9.998306e-01   p_joint 1.117117e-04

Joint ci ratio: 3.505957e-01	ci left: 9.208723e-05	ci right 1.320024e-04	k: 124	n:1120000
Cons ci ratio: 4.837498e-05	ci left: 9.998044e-01	ci right 9.998536e-01	k: 1119810	n:1120000
KS ci ratio: 2.263209e+00	ci left: 2.162584e-07	ci right 6.450599e-06	k: 2	n:1120000
ZNF845   1120000 perm   699 sec   (1602 perm/sec)   p_kst 1.785714e-06   p_cons 9.998304e-01   p_joint 1.107143e-04

Joint ci ratio: 3.548808e-01	ci left: 8.885262e-05	ci right 1.279452e-04	k: 121	n:1130000
Cons ci ratio: 4.819727e-05	ci left: 9.998043e-01	ci right 9.998533e-01	k: 1129808	n:1130000
KS ci ratio: 2.263209e+00	ci left: 2.143446e-07	ci right 6.393514e-06	k: 2	n:1130000
ZNF845   1130000 perm   709 sec   (1593 perm/sec)   p_kst 1.769912e-06   p_cons 9.998301e-01   p_joint 1.070796e-04

Joint ci ratio: 3.520071e-01	ci left: 8.967185e-05	ci right 1.287324e-04	k: 123	n:1140000
Cons ci ratio: 4.802139e-05	ci left: 9.998041e-01	ci right 9.998529e-01	k: 1139806	n:1140000
KS ci ratio: 2.263209e+00	ci left: 2.124644e-07	ci right 6.337431e-06	k: 2	n:1140000
ZNF845   1140000 perm   720 sec   (1583 perm/sec)   p_kst 1.754386e-06   p_cons 9.998298e-01   p_joint 1.078947e-04

Joint ci ratio: 3.505963e-01	ci left: 8.968494e-05	ci right 1.285589e-04	k: 124	n:1150000
Cons ci ratio: 4.784732e-05	ci left: 9.998040e-01	ci right 9.998526e-01	k: 1149804	n:1150000
KS ci ratio: 2.263209e+00	ci left: 2.106168e-07	ci right 6.282323e-06	k: 2	n:1150000
ZNF845   1150000 perm   730 sec   (1575 perm/sec)   p_kst 1.739130e-06   p_cons 9.998296e-01   p_joint 1.078261e-04

Joint ci ratio: 3.534356e-01	ci left: 8.734007e-05	ci right 1.255747e-04	k: 122	n:1160000
Cons ci ratio: 4.791404e-05	ci left: 9.998020e-01	ci right 9.998507e-01	k: 1159800	n:1160000
KS ci ratio: 2.263209e+00	ci left: 2.088012e-07	ci right 6.228165e-06	k: 2	n:1160000
ZNF845   1160000 perm   741 sec   (1566 perm/sec)   p_kst 1.724138e-06   p_cons 9.998276e-01   p_joint 1.051724e-04

Joint ci ratio: 3.534358e-01	ci left: 8.659357e-05	ci right 1.245014e-04	k: 122	n:1170000
Cons ci ratio: 4.774028e-05	ci left: 9.998018e-01	ci right 9.998503e-01	k: 1169798	n:1170000
KS ci ratio: 2.263209e+00	ci left: 2.070165e-07	ci right 6.174933e-06	k: 2	n:1170000
ZNF845   1170000 perm   752 sec   (1555 perm/sec)   p_kst 1.709402e-06   p_cons 9.998274e-01   p_joint 1.042735e-04

Joint ci ratio: 3.492026e-01	ci left: 8.817778e-05	ci right 1.262122e-04	k: 125	n:1180000
Cons ci ratio: 4.756832e-05	ci left: 9.998017e-01	ci right 9.998500e-01	k: 1179796	n:1180000
KS ci ratio: 2.263209e+00	ci left: 2.052622e-07	ci right 6.122603e-06	k: 2	n:1180000
ZNF845   1180000 perm   763 sec   (1546 perm/sec)   p_kst 1.694915e-06   p_cons 9.998271e-01   p_joint 1.059322e-04

Joint ci ratio: 3.464635e-01	ci left: 8.897065e-05	ci right 1.269785e-04	k: 127	n:1190000
Cons ci ratio: 4.751249e-05	ci left: 9.998007e-01	ci right 9.998489e-01	k: 1189793	n:1190000
KS ci ratio: 2.263209e+00	ci left: 2.035373e-07	ci right 6.071153e-06	k: 2	n:1190000
ZNF845   1190000 perm   774 sec   (1537 perm/sec)   p_kst 1.680672e-06   p_cons 9.998261e-01   p_joint 1.067227e-04

Joint ci ratio: 3.505971e-01	ci left: 8.594803e-05	ci right 1.232024e-04	k: 124	n:1200000
Cons ci ratio: 4.711652e-05	ci left: 9.998023e-01	ci right 9.998502e-01	k: 1199793	n:1200000
KS ci ratio: 2.263209e+00	ci left: 2.018411e-07	ci right 6.020560e-06	k: 2	n:1200000
ZNF845   1200000 perm   785 sec   (1528 perm/sec)   p_kst 1.666667e-06   p_cons 9.998275e-01   p_joint 1.033333e-04

Joint ci ratio: 3.492030e-01	ci left: 8.599153e-05	ci right 1.230830e-04	k: 125	n:1210000
Cons ci ratio: 4.695125e-05	ci left: 9.998022e-01	ci right 9.998499e-01	k: 1209791	n:1210000
KS ci ratio: 2.263209e+00	ci left: 2.001730e-07	ci right 5.970803e-06	k: 2	n:1210000
ZNF845   1210000 perm   796 sec   (1521 perm/sec)   p_kst 1.652893e-06   p_cons 9.998273e-01   p_joint 1.033058e-04

Joint ci ratio: 3.534365e-01	ci left: 8.304463e-05	ci right 1.193990e-04	k: 122	n:1220000
Cons ci ratio: 4.700784e-05	ci left: 9.998003e-01	ci right 9.998481e-01	k: 1219787	n:1220000
KS ci ratio: 2.263209e+00	ci left: 1.985323e-07	ci right 5.921862e-06	k: 2	n:1220000
ZNF845   1220000 perm   807 sec   (1511 perm/sec)   p_kst 1.639344e-06   p_cons 9.998254e-01   p_joint 1.000000e-04

Joint ci ratio: 3.534367e-01	ci left: 8.236946e-05	ci right 1.184283e-04	k: 122	n:1230000
Cons ci ratio: 4.673446e-05	ci left: 9.998011e-01	ci right 9.998485e-01	k: 1229786	n:1230000
KS ci ratio: 2.263209e+00	ci left: 1.969182e-07	ci right 5.873717e-06	k: 2	n:1230000
ZNF845   1230000 perm   818 sec   (1504 perm/sec)   p_kst 1.626016e-06   p_cons 9.998260e-01   p_joint 9.918699e-05

Joint ci ratio: 3.520086e-01	ci left: 8.244019e-05	ci right 1.183508e-04	k: 123	n:1240000
Cons ci ratio: 4.646524e-05	ci left: 9.998018e-01	ci right 9.998490e-01	k: 1239785	n:1240000
KS ci ratio: 2.263209e+00	ci left: 1.953301e-07	ci right 5.826349e-06	k: 2	n:1240000
ZNF845   1240000 perm   829 sec   (1495 perm/sec)   p_kst 1.612903e-06   p_cons 9.998266e-01   p_joint 9.919355e-05

Joint ci ratio: 3.563462e-01	ci left: 7.959416e-05	ci right 1.147914e-04	k: 120	n:1250000
Cons ci ratio: 4.620008e-05	ci left: 9.998026e-01	ci right 9.998495e-01	k: 1249784	n:1250000
KS ci ratio: 2.263209e+00	ci left: 1.937675e-07	ci right 5.779738e-06	k: 2	n:1250000
ZNF845   1250000 perm   841 sec   (1486 perm/sec)   p_kst 1.600000e-06   p_cons 9.998272e-01   p_joint 9.600000e-05

Joint ci ratio: 3.520089e-01	ci left: 8.113161e-05	ci right 1.164723e-04	k: 123	n:1260000
Cons ci ratio: 4.583338e-05	ci left: 9.998041e-01	ci right 9.998507e-01	k: 1259784	n:1260000
KS ci ratio: 1.959996e+00	ci left: 4.910099e-07	ci right 6.958137e-06	k: 3	n:1260000
ZNF845   1260000 perm   853 sec   (1478 perm/sec)   p_kst 2.380952e-06   p_cons 9.998286e-01   p_joint 9.761905e-05

Joint ci ratio: 3.520091e-01	ci left: 8.049277e-05	ci right 1.155552e-04	k: 123	n:1270000
Cons ci ratio: 4.547246e-05	ci left: 9.998057e-01	ci right 9.998518e-01	k: 1269784	n:1270000
KS ci ratio: 1.959996e+00	ci left: 4.871437e-07	ci right 6.903349e-06	k: 3	n:1270000
ZNF845   1270000 perm   864 sec   (1470 perm/sec)   p_kst 2.362205e-06   p_cons 9.998299e-01   p_joint 9.685039e-05

Joint ci ratio: 3.492040e-01	ci left: 8.128884e-05	ci right 1.163519e-04	k: 125	n:1280000
Cons ci ratio: 4.522103e-05	ci left: 9.998064e-01	ci right 9.998523e-01	k: 1279783	n:1280000
KS ci ratio: 1.959996e+00	ci left: 4.833379e-07	ci right 6.849417e-06	k: 3	n:1280000
ZNF845   1280000 perm   875 sec   (1463 perm/sec)   p_kst 2.343750e-06   p_cons 9.998305e-01   p_joint 9.765625e-05

Joint ci ratio: 3.492042e-01	ci left: 8.065869e-05	ci right 1.154500e-04	k: 125	n:1290000
Cons ci ratio: 4.507585e-05	ci left: 9.998062e-01	ci right 9.998520e-01	k: 1289781	n:1290000
KS ci ratio: 1.959996e+00	ci left: 4.795910e-07	ci right 6.796321e-06	k: 3	n:1290000
ZNF845   1290000 perm   887 sec   (1454 perm/sec)   p_kst 2.325581e-06   p_cons 9.998302e-01   p_joint 9.689922e-05

Joint ci ratio: 3.424746e-01	ci left: 8.355039e-05	ci right 1.187408e-04	k: 130	n:1300000
Cons ci ratio: 4.483064e-05	ci left: 9.998069e-01	ci right 9.998524e-01	k: 1299780	n:1300000
KS ci ratio: 1.959996e+00	ci left: 4.759019e-07	ci right 6.744041e-06	k: 3	n:1300000
ZNF845   1300000 perm   899 sec   (1446 perm/sec)   p_kst 2.307692e-06   p_cons 9.998308e-01   p_joint 1.000000e-04

Joint ci ratio: 3.478268e-01	ci left: 8.012379e-05	ci right 1.145173e-04	k: 126	n:1310000
Cons ci ratio: 4.458895e-05	ci left: 9.998075e-01	ci right 9.998528e-01	k: 1309779	n:1310000
KS ci ratio: 1.959996e+00	ci left: 4.722690e-07	ci right 6.692560e-06	k: 3	n:1310000
ZNF845   1310000 perm   911 sec   (1439 perm/sec)   p_kst 2.290076e-06   p_cons 9.998313e-01   p_joint 9.618321e-05

Joint ci ratio: 3.424749e-01	ci left: 8.228447e-05	ci right 1.169417e-04	k: 130	n:1320000
Cons ci ratio: 4.445004e-05	ci left: 9.998074e-01	ci right 9.998525e-01	k: 1319777	n:1320000
KS ci ratio: 1.959996e+00	ci left: 4.686912e-07	ci right 6.641859e-06	k: 3	n:1320000
ZNF845   1320000 perm   922 sec   (1431 perm/sec)   p_kst 2.272727e-06   p_cons 9.998311e-01   p_joint 9.848485e-05

Joint ci ratio: 3.398900e-01	ci left: 8.304072e-05	ci right 1.176945e-04	k: 132	n:1330000
Cons ci ratio: 4.431234e-05	ci left: 9.998072e-01	ci right 9.998522e-01	k: 1329775	n:1330000
KS ci ratio: 1.959996e+00	ci left: 4.651673e-07	ci right 6.591920e-06	k: 3	n:1330000
ZNF845   1330000 perm   934 sec   (1424 perm/sec)   p_kst 2.255639e-06   p_cons 9.998308e-01   p_joint 9.924812e-05

Joint ci ratio: 3.373628e-01	ci left: 8.378666e-05	ci right 1.184352e-04	k: 134	n:1340000
Cons ci ratio: 4.398163e-05	ci left: 9.998087e-01	ci right 9.998533e-01	k: 1339775	n:1340000
KS ci ratio: 1.959996e+00	ci left: 4.616959e-07	ci right 6.542727e-06	k: 3	n:1340000
ZNF845   1340000 perm   946 sec   (1416 perm/sec)   p_kst 2.238806e-06   p_cons 9.998321e-01   p_joint 1.000000e-04

Joint ci ratio: 3.348911e-01	ci left: 8.452248e-05	ci right 1.191639e-04	k: 136	n:1350000
Cons ci ratio: 4.384859e-05	ci left: 9.998085e-01	ci right 9.998530e-01	k: 1349773	n:1350000
KS ci ratio: 1.959996e+00	ci left: 4.582759e-07	ci right 6.494262e-06	k: 3	n:1350000
ZNF845   1350000 perm   959 sec   (1408 perm/sec)   p_kst 2.222222e-06   p_cons 9.998319e-01   p_joint 1.007407e-04

Joint ci ratio: 3.312833e-01	ci left: 8.592243e-05	ci right 1.206774e-04	k: 139	n:1360000
Cons ci ratio: 4.371666e-05	ci left: 9.998083e-01	ci right 9.998527e-01	k: 1359771	n:1360000
KS ci ratio: 1.959996e+00	ci left: 4.549062e-07	ci right 6.446511e-06	k: 3	n:1360000
ZNF845   1360000 perm   971 sec   (1401 perm/sec)   p_kst 2.205882e-06   p_cons 9.998316e-01   p_joint 1.022059e-04

Joint ci ratio: 3.301064e-01	ci left: 8.596459e-05	ci right 1.205868e-04	k: 140	n:1370000
Cons ci ratio: 4.367970e-05	ci left: 9.998074e-01	ci right 9.998517e-01	k: 1369768	n:1370000
KS ci ratio: 1.959996e+00	ci left: 4.515857e-07	ci right 6.399456e-06	k: 3	n:1370000
ZNF845   1370000 perm   984 sec   (1393 perm/sec)   p_kst 2.189781e-06   p_cons 9.998307e-01   p_joint 1.021898e-04

Joint ci ratio: 3.312835e-01	ci left: 8.467716e-05	ci right 1.189285e-04	k: 139	n:1380000
Cons ci ratio: 4.345612e-05	ci left: 9.998080e-01	ci right 9.998521e-01	k: 1379767	n:1380000
KS ci ratio: 1.959996e+00	ci left: 4.483134e-07	ci right 6.353083e-06	k: 3	n:1380000
ZNF845   1380000 perm   996 sec   (1385 perm/sec)   p_kst 2.173913e-06   p_cons 9.998312e-01   p_joint 1.007246e-04

Joint ci ratio: 3.312837e-01	ci left: 8.406797e-05	ci right 1.180729e-04	k: 139	n:1390000
Cons ci ratio: 4.332747e-05	ci left: 9.998079e-01	ci right 9.998519e-01	k: 1389765	n:1390000
KS ci ratio: 1.959996e+00	ci left: 4.450881e-07	ci right 6.307378e-06	k: 3	n:1390000
ZNF845   1390000 perm   1008 sec   (1378 perm/sec)   p_kst 2.158273e-06   p_cons 9.998309e-01   p_joint 1.000000e-04

Joint ci ratio: 3.312838e-01	ci left: 8.346748e-05	ci right 1.172295e-04	k: 139	n:1400000
Cons ci ratio: 4.301797e-05	ci left: 9.998093e-01	ci right 9.998529e-01	k: 1399765	n:1400000
KS ci ratio: 1.959997e+00	ci left: 4.419089e-07	ci right 6.262325e-06	k: 3	n:1400000
ZNF845   1400000 perm   1021 sec   (1371 perm/sec)   p_kst 2.142857e-06   p_cons 9.998321e-01   p_joint 9.928571e-05

Joint ci ratio: 3.312839e-01	ci left: 8.287551e-05	ci right 1.163981e-04	k: 139	n:1410000
Cons ci ratio: 4.289348e-05	ci left: 9.998091e-01	ci right 9.998526e-01	k: 1409763	n:1410000
KS ci ratio: 1.959997e+00	ci left: 4.387748e-07	ci right 6.217911e-06	k: 3	n:1410000
ZNF845   1410000 perm   1033 sec   (1364 perm/sec)   p_kst 2.127660e-06   p_cons 9.998319e-01   p_joint 9.858156e-05

Joint ci ratio: 3.312840e-01	ci left: 8.229187e-05	ci right 1.155784e-04	k: 139	n:1420000
Cons ci ratio: 4.277000e-05	ci left: 9.998089e-01	ci right 9.998524e-01	k: 1419761	n:1420000
KS ci ratio: 1.959997e+00	ci left: 4.356848e-07	ci right 6.174123e-06	k: 3	n:1420000
ZNF845   1420000 perm   1046 sec   (1358 perm/sec)   p_kst 2.112676e-06   p_cons 9.998317e-01   p_joint 9.788732e-05

Joint ci ratio: 3.301072e-01	ci left: 8.235765e-05	ci right 1.155273e-04	k: 140	n:1430000
Cons ci ratio: 4.264751e-05	ci left: 9.998088e-01	ci right 9.998521e-01	k: 1429759	n:1430000
KS ci ratio: 1.959997e+00	ci left: 4.326381e-07	ci right 6.130948e-06	k: 3	n:1430000
ZNF845   1430000 perm   1058 sec   (1351 perm/sec)   p_kst 2.097902e-06   p_cons 9.998315e-01   p_joint 9.790210e-05

Joint ci ratio: 3.301073e-01	ci left: 8.178572e-05	ci right 1.147250e-04	k: 140	n:1440000
Cons ci ratio: 4.235132e-05	ci left: 9.998101e-01	ci right 9.998531e-01	k: 1439759	n:1440000
KS ci ratio: 1.959997e+00	ci left: 4.296336e-07	ci right 6.088372e-06	k: 3	n:1440000
ZNF845   1440000 perm   1071 sec   (1345 perm/sec)   p_kst 2.083333e-06   p_cons 9.998326e-01   p_joint 9.722222e-05

Joint ci ratio: 3.277906e-01	ci left: 8.248710e-05	ci right 1.154266e-04	k: 142	n:1450000
Cons ci ratio: 4.214605e-05	ci left: 9.998107e-01	ci right 9.998535e-01	k: 1449758	n:1450000
KS ci ratio: 1.959997e+00	ci left: 4.266706e-07	ci right 6.046383e-06	k: 3	n:1450000
ZNF845   1450000 perm   1084 sec   (1338 perm/sec)   p_kst 2.068966e-06   p_cons 9.998331e-01   p_joint 9.793103e-05

Joint ci ratio: 3.266504e-01	ci left: 8.255080e-05	ci right 1.153770e-04	k: 143	n:1460000
Cons ci ratio: 4.194340e-05	ci left: 9.998113e-01	ci right 9.998538e-01	k: 1459757	n:1460000
KS ci ratio: 1.959997e+00	ci left: 4.237482e-07	ci right 6.004970e-06	k: 3	n:1460000
ZNF845   1460000 perm   1096 sec   (1332 perm/sec)   p_kst 2.054795e-06   p_cons 9.998336e-01   p_joint 9.794521e-05

Joint ci ratio: 3.255221e-01	ci left: 8.261382e-05	ci right 1.153279e-04	k: 144	n:1470000
Cons ci ratio: 4.174334e-05	ci left: 9.998118e-01	ci right 9.998542e-01	k: 1469756	n:1470000
KS ci ratio: 1.959997e+00	ci left: 4.208656e-07	ci right 5.964120e-06	k: 3	n:1470000
ZNF845   1470000 perm   1110 sec   (1325 perm/sec)   p_kst 2.040816e-06   p_cons 9.998340e-01   p_joint 9.795918e-05

Joint ci ratio: 3.211226e-01	ci left: 8.453901e-05	ci right 1.174699e-04	k: 148	n:1480000
Cons ci ratio: 4.163018e-05	ci left: 9.998117e-01	ci right 9.998539e-01	k: 1479754	n:1480000
KS ci ratio: 1.959997e+00	ci left: 4.180219e-07	ci right 5.923822e-06	k: 3	n:1480000
ZNF845   1480000 perm   1123 sec   (1318 perm/sec)   p_kst 2.027027e-06   p_cons 9.998338e-01   p_joint 1.000000e-04

Joint ci ratio: 3.200504e-01	ci left: 8.458878e-05	ci right 1.174065e-04	k: 149	n:1490000
Cons ci ratio: 4.135076e-05	ci left: 9.998129e-01	ci right 9.998549e-01	k: 1489754	n:1490000
KS ci ratio: 1.959997e+00	ci left: 4.152164e-07	ci right 5.884065e-06	k: 3	n:1490000
ZNF845   1490000 perm   1136 sec   (1311 perm/sec)   p_kst 2.013423e-06   p_cons 9.998349e-01   p_joint 1.000000e-04

Joint ci ratio: 3.189889e-01	ci left: 8.463806e-05	ci right 1.173438e-04	k: 150	n:1500000
Cons ci ratio: 4.115815e-05	ci left: 9.998135e-01	ci right 9.998552e-01	k: 1499753	n:1500000
KS ci ratio: 1.959997e+00	ci left: 4.124483e-07	ci right 5.844837e-06	k: 3	n:1500000
ZNF845   1500000 perm   1149 sec   (1305 perm/sec)   p_kst 2.000000e-06   p_cons 9.998353e-01   p_joint 1.000000e-04

Joint ci ratio: 3.179379e-01	ci left: 8.468687e-05	ci right 1.172817e-04	k: 151	n:1510000
Cons ci ratio: 4.096792e-05	ci left: 9.998140e-01	ci right 9.998556e-01	k: 1509752	n:1510000
KS ci ratio: 1.959997e+00	ci left: 4.097168e-07	ci right 5.806130e-06	k: 3	n:1510000
ZNF845   1510000 perm   1162 sec   (1299 perm/sec)   p_kst 1.986755e-06   p_cons 9.998358e-01   p_joint 1.000000e-04

Joint ci ratio: 3.158665e-01	ci left: 8.534087e-05	ci right 1.179302e-04	k: 153	n:1520000
Cons ci ratio: 4.086152e-05	ci left: 9.998138e-01	ci right 9.998553e-01	k: 1519750	n:1520000
KS ci ratio: 1.959997e+00	ci left: 4.070213e-07	ci right 5.767932e-06	k: 3	n:1520000
ZNF845   1520000 perm   1176 sec   (1293 perm/sec)   p_kst 1.973684e-06   p_cons 9.998355e-01   p_joint 1.006579e-04

Joint ci ratio: 3.158666e-01	ci left: 8.478308e-05	ci right 1.171594e-04	k: 153	n:1530000
Cons ci ratio: 4.075586e-05	ci left: 9.998137e-01	ci right 9.998550e-01	k: 1529748	n:1530000
KS ci ratio: 1.959997e+00	ci left: 4.043610e-07	ci right 5.730233e-06	k: 3	n:1530000
ZNF845   1530000 perm   1189 sec   (1287 perm/sec)   p_kst 1.960784e-06   p_cons 9.998353e-01   p_joint 1.000000e-04

Joint ci ratio: 3.158667e-01	ci left: 8.423254e-05	ci right 1.163986e-04	k: 153	n:1540000
Cons ci ratio: 4.065095e-05	ci left: 9.998135e-01	ci right 9.998547e-01	k: 1539746	n:1540000
KS ci ratio: 1.959997e+00	ci left: 4.017353e-07	ci right 5.693024e-06	k: 3	n:1540000
ZNF845   1540000 perm   1202 sec   (1281 perm/sec)   p_kst 1.948052e-06   p_cons 9.998351e-01   p_joint 9.935065e-05

Joint ci ratio: 3.148461e-01	ci left: 8.428321e-05	ci right 1.163437e-04	k: 154	n:1550000
Cons ci ratio: 4.054677e-05	ci left: 9.998133e-01	ci right 9.998545e-01	k: 1549744	n:1550000
KS ci ratio: 1.959997e+00	ci left: 3.991435e-07	ci right 5.656295e-06	k: 3	n:1550000
ZNF845   1550000 perm   1216 sec   (1275 perm/sec)   p_kst 1.935484e-06   p_cons 9.998348e-01   p_joint 9.935484e-05

Joint ci ratio: 3.128342e-01	ci left: 8.492403e-05	ci right 1.169806e-04	k: 156	n:1560000
Cons ci ratio: 4.044331e-05	ci left: 9.998132e-01	ci right 9.998542e-01	k: 1559742	n:1560000
KS ci ratio: 1.959997e+00	ci left: 3.965849e-07	ci right 5.620036e-06	k: 3	n:1560000
ZNF845   1560000 perm   1229 sec   (1269 perm/sec)   p_kst 1.923077e-06   p_cons 9.998346e-01   p_joint 1.000000e-04

Joint ci ratio: 3.128343e-01	ci left: 8.438310e-05	ci right 1.162355e-04	k: 156	n:1570000
Cons ci ratio: 4.026321e-05	ci left: 9.998137e-01	ci right 9.998545e-01	k: 1569741	n:1570000
KS ci ratio: 1.959997e+00	ci left: 3.940588e-07	ci right 5.584240e-06	k: 3	n:1570000
ZNF845   1570000 perm   1243 sec   (1263 perm/sec)   p_kst 1.910828e-06   p_cons 9.998350e-01   p_joint 9.936306e-05

Joint ci ratio: 3.128344e-01	ci left: 8.384903e-05	ci right 1.154998e-04	k: 156	n:1580000
Cons ci ratio: 4.023855e-05	ci left: 9.998128e-01	ci right 9.998536e-01	k: 1579738	n:1580000
KS ci ratio: 1.959997e+00	ci left: 3.915648e-07	ci right 5.548897e-06	k: 3	n:1580000
ZNF845   1580000 perm   1256 sec   (1258 perm/sec)   p_kst 1.898734e-06   p_cons 9.998342e-01   p_joint 9.873418e-05

Joint ci ratio: 3.128345e-01	ci left: 8.332167e-05	ci right 1.147734e-04	k: 156	n:1590000
Cons ci ratio: 4.021290e-05	ci left: 9.998120e-01	ci right 9.998528e-01	k: 1589735	n:1590000
KS ci ratio: 1.959997e+00	ci left: 3.891021e-07	ci right 5.513998e-06	k: 3	n:1590000
ZNF845   1590000 perm   1270 sec   (1252 perm/sec)   p_kst 1.886792e-06   p_cons 9.998333e-01   p_joint 9.811321e-05

Joint ci ratio: 3.244066e-01	ci left: 7.647542e-05	ci right 1.066334e-04	k: 145	n:1600000
Cons ci ratio: 4.026094e-05	ci left: 9.998105e-01	ci right 9.998514e-01	k: 1599731	n:1600000
KS ci ratio: 1.959997e+00	ci left: 3.866702e-07	ci right 5.479536e-06	k: 3	n:1600000
ZNF845   1600000 perm   1284 sec   (1246 perm/sec)   p_kst 1.875000e-06   p_cons 9.998319e-01   p_joint 9.062500e-05

Joint ci ratio: 3.233013e-01	ci left: 7.657105e-05	ci right 1.066425e-04	k: 146	n:1610000
Cons ci ratio: 4.008489e-05	ci left: 9.998111e-01	ci right 9.998517e-01	k: 1609730	n:1610000
KS ci ratio: 1.959997e+00	ci left: 3.842686e-07	ci right 5.445501e-06	k: 3	n:1610000
ZNF845   1610000 perm   1298 sec   (1240 perm/sec)   p_kst 1.863354e-06   p_cons 9.998323e-01   p_joint 9.068323e-05

Joint ci ratio: 3.222072e-01	ci left: 7.666567e-05	ci right 1.066514e-04	k: 147	n:1620000
Cons ci ratio: 3.983743e-05	ci left: 9.998122e-01	ci right 9.998526e-01	k: 1619730	n:1620000
KS ci ratio: 1.959997e+00	ci left: 3.818965e-07	ci right 5.411887e-06	k: 3	n:1620000
ZNF845   1620000 perm   1312 sec   (1235 perm/sec)   p_kst 1.851852e-06   p_cons 9.998333e-01   p_joint 9.074074e-05

Joint ci ratio: 3.200518e-01	ci left: 7.732344e-05	ci right 1.073226e-04	k: 149	n:1630000
Cons ci ratio: 3.981160e-05	ci left: 9.998114e-01	ci right 9.998518e-01	k: 1629727	n:1630000
KS ci ratio: 1.959997e+00	ci left: 3.795536e-07	ci right 5.378686e-06	k: 3	n:1630000
ZNF845   1630000 perm   1327 sec   (1229 perm/sec)   p_kst 1.840491e-06   p_cons 9.998325e-01   p_joint 9.141104e-05

Joint ci ratio: 3.200519e-01	ci left: 7.685195e-05	ci right 1.066682e-04	k: 149	n:1640000
Cons ci ratio: 3.985665e-05	ci left: 9.998100e-01	ci right 9.998504e-01	k: 1639723	n:1640000
KS ci ratio: 1.959997e+00	ci left: 3.772393e-07	ci right 5.345889e-06	k: 3	n:1640000
ZNF845   1640000 perm   1341 sec   (1223 perm/sec)   p_kst 1.829268e-06   p_cons 9.998311e-01   p_joint 9.085366e-05

Joint ci ratio: 3.348942e-01	ci left: 6.915466e-05	ci right 9.749792e-05	k: 136	n:1650000
Cons ci ratio: 3.961507e-05	ci left: 9.998111e-01	ci right 9.998513e-01	k: 1649723	n:1650000
KS ci ratio: 1.959997e+00	ci left: 3.749530e-07	ci right 5.313490e-06	k: 3	n:1650000
ZNF845   1650000 perm   1355 sec   (1218 perm/sec)   p_kst 1.818182e-06   p_cons 9.998321e-01   p_joint 8.242424e-05

Joint ci ratio: 3.386227e-01	ci left: 6.708362e-05	ci right 9.495112e-05	k: 133	n:1660000
Cons ci ratio: 3.951782e-05	ci left: 9.998110e-01	ci right 9.998511e-01	k: 1659721	n:1660000
KS ci ratio: 1.959997e+00	ci left: 3.726942e-07	ci right 5.281481e-06	k: 3	n:1660000
ZNF845   1660000 perm   1371 sec   (1211 perm/sec)   p_kst 1.807229e-06   p_cons 9.998319e-01   p_joint 8.012048e-05

Joint ci ratio: 3.623913e-01	ci left: 5.739736e-05	ci right 8.331137e-05	k: 116	n:1670000
Cons ci ratio: 3.935126e-05	ci left: 9.998115e-01	ci right 9.998514e-01	k: 1669720	n:1670000
KS ci ratio: 1.959997e+00	ci left: 3.704625e-07	ci right 5.249855e-06	k: 3	n:1670000
ZNF845   1670000 perm   1386 sec   (1205 perm/sec)   p_kst 1.796407e-06   p_cons 9.998323e-01   p_joint 6.946108e-05

Joint ci ratio: 3.608525e-01	ci left: 5.759687e-05	ci right 8.346456e-05	k: 117	n:1680000
Cons ci ratio: 3.939448e-05	ci left: 9.998101e-01	ci right 9.998500e-01	k: 1679716	n:1680000
KS ci ratio: 1.959997e+00	ci left: 3.682574e-07	ci right 5.218606e-06	k: 3	n:1680000
ZNF845   1680000 perm   1401 sec   (1199 perm/sec)   p_kst 1.785714e-06   p_cons 9.998310e-01   p_joint 6.964286e-05

Joint ci ratio: 3.593331e-01	ci left: 5.779425e-05	ci right 8.361571e-05	k: 118	n:1690000
Cons ci ratio: 3.929855e-05	ci left: 9.998100e-01	ci right 9.998498e-01	k: 1689714	n:1690000
KS ci ratio: 1.753074e+00	ci left: 6.448911e-07	ci right 6.060100e-06	k: 4	n:1690000
ZNF845   1690000 perm   1416 sec   (1194 perm/sec)   p_kst 2.366864e-06   p_cons 9.998308e-01   p_joint 6.982249e-05

Joint ci ratio: 3.563508e-01	ci left: 5.852500e-05	ci right 8.440564e-05	k: 120	n:1700000
Cons ci ratio: 3.906736e-05	ci left: 9.998111e-01	ci right 9.998507e-01	k: 1699714	n:1700000
KS ci ratio: 1.753074e+00	ci left: 6.410976e-07	ci right 6.024453e-06	k: 4	n:1700000
ZNF845   1700000 perm   1431 sec   (1188 perm/sec)   p_kst 2.352941e-06   p_cons 9.998318e-01   p_joint 7.058824e-05

Joint ci ratio: 3.548874e-01	ci left: 5.871530e-05	ci right 8.454887e-05	k: 121	n:1710000
Cons ci ratio: 3.904138e-05	ci left: 9.998103e-01	ci right 9.998499e-01	k: 1709711	n:1710000
KS ci ratio: 1.753074e+00	ci left: 6.373485e-07	ci right 5.989222e-06	k: 4	n:1710000
ZNF845   1710000 perm   1445 sec   (1183 perm/sec)   p_kst 2.339181e-06   p_cons 9.998310e-01   p_joint 7.076023e-05

Joint ci ratio: 3.548874e-01	ci left: 5.837393e-05	ci right 8.405731e-05	k: 121	n:1720000
Cons ci ratio: 3.881438e-05	ci left: 9.998114e-01	ci right 9.998508e-01	k: 1719711	n:1720000
KS ci ratio: 1.753074e+00	ci left: 6.336430e-07	ci right 5.954401e-06	k: 4	n:1720000
ZNF845   1720000 perm   1460 sec   (1178 perm/sec)   p_kst 2.325581e-06   p_cons 9.998320e-01   p_joint 7.034884e-05

Joint ci ratio: 3.534418e-01	ci left: 5.856312e-05	ci right 8.420068e-05	k: 122	n:1730000
Cons ci ratio: 3.878912e-05	ci left: 9.998107e-01	ci right 9.998500e-01	k: 1729708	n:1730000
KS ci ratio: 1.753074e+00	ci left: 6.299803e-07	ci right 5.919983e-06	k: 4	n:1730000
ZNF845   1730000 perm   1475 sec   (1173 perm/sec)   p_kst 2.312139e-06   p_cons 9.998312e-01   p_joint 7.052023e-05

Joint ci ratio: 3.534419e-01	ci left: 5.822655e-05	ci right 8.371677e-05	k: 122	n:1740000
Cons ci ratio: 3.869760e-05	ci left: 9.998106e-01	ci right 9.998498e-01	k: 1739706	n:1740000
KS ci ratio: 1.753074e+00	ci left: 6.263598e-07	ci right 5.885960e-06	k: 4	n:1740000
ZNF845   1740000 perm   1490 sec   (1168 perm/sec)   p_kst 2.298851e-06   p_cons 9.998310e-01   p_joint 7.011494e-05

Joint ci ratio: 3.520138e-01	ci left: 5.841463e-05	ci right 8.386024e-05	k: 123	n:1750000
Cons ci ratio: 3.860668e-05	ci left: 9.998105e-01	ci right 9.998496e-01	k: 1749704	n:1750000
KS ci ratio: 1.753074e+00	ci left: 6.227806e-07	ci right 5.852326e-06	k: 4	n:1750000
ZNF845   1750000 perm   1505 sec   (1163 perm/sec)   p_kst 2.285714e-06   p_cons 9.998309e-01   p_joint 7.028571e-05

Joint ci ratio: 3.506029e-01	ci left: 5.860078e-05	ci right 8.400188e-05	k: 124	n:1760000
Cons ci ratio: 3.845189e-05	ci left: 9.998109e-01	ci right 9.998499e-01	k: 1759703	n:1760000
KS ci ratio: 1.753074e+00	ci left: 6.192420e-07	ci right 5.819074e-06	k: 4	n:1760000
ZNF845   1760000 perm   1520 sec   (1158 perm/sec)   p_kst 2.272727e-06   p_cons 9.998312e-01   p_joint 7.045455e-05

Joint ci ratio: 3.506030e-01	ci left: 5.826970e-05	ci right 8.352730e-05	k: 124	n:1770000
Cons ci ratio: 3.842664e-05	ci left: 9.998102e-01	ci right 9.998491e-01	k: 1769700	n:1770000
KS ci ratio: 1.753074e+00	ci left: 6.157435e-07	ci right 5.786198e-06	k: 4	n:1770000
ZNF845   1770000 perm   1535 sec   (1153 perm/sec)   p_kst 2.259887e-06   p_cons 9.998305e-01   p_joint 7.005650e-05

Joint ci ratio: 3.506030e-01	ci left: 5.794234e-05	ci right 8.305805e-05	k: 124	n:1780000
Cons ci ratio: 3.833750e-05	ci left: 9.998101e-01	ci right 9.998489e-01	k: 1779698	n:1780000
KS ci ratio: 1.753074e+00	ci left: 6.122842e-07	ci right 5.753691e-06	k: 4	n:1780000
ZNF845   1780000 perm   1551 sec   (1148 perm/sec)   p_kst 2.247191e-06   p_cons 9.998303e-01   p_joint 6.966292e-05

Joint ci ratio: 3.506031e-01	ci left: 5.761864e-05	ci right 8.259404e-05	k: 124	n:1790000
Cons ci ratio: 3.812330e-05	ci left: 9.998111e-01	ci right 9.998498e-01	k: 1789698	n:1790000
KS ci ratio: 1.753074e+00	ci left: 6.088637e-07	ci right 5.721548e-06	k: 4	n:1790000
ZNF845   1790000 perm   1566 sec   (1143 perm/sec)   p_kst 2.234637e-06   p_cons 9.998313e-01   p_joint 6.927374e-05

Joint ci ratio: 3.492090e-01	ci left: 5.780526e-05	ci right 8.273937e-05	k: 125	n:1800000
Cons ci ratio: 3.803642e-05	ci left: 9.998110e-01	ci right 9.998496e-01	k: 1799696	n:1800000
KS ci ratio: 1.753074e+00	ci left: 6.054811e-07	ci right 5.689762e-06	k: 4	n:1800000
ZNF845   1800000 perm   1582 sec   (1138 perm/sec)   p_kst 2.222222e-06   p_cons 9.998311e-01   p_joint 6.944444e-05

Joint ci ratio: 3.492091e-01	ci left: 5.748590e-05	ci right 8.228225e-05	k: 125	n:1810000
Cons ci ratio: 3.782626e-05	ci left: 9.998121e-01	ci right 9.998504e-01	k: 1809696	n:1810000
KS ci ratio: 1.753074e+00	ci left: 6.021359e-07	ci right 5.658327e-06	k: 4	n:1810000
ZNF845   1810000 perm   1597 sec   (1133 perm/sec)   p_kst 2.209945e-06   p_cons 9.998320e-01   p_joint 6.906077e-05

Joint ci ratio: 3.534425e-01	ci left: 5.566713e-05	ci right 8.003694e-05	k: 122	n:1820000
Cons ci ratio: 3.774156e-05	ci left: 9.998119e-01	ci right 9.998502e-01	k: 1819694	n:1820000
KS ci ratio: 1.753074e+00	ci left: 5.988274e-07	ci right 5.627237e-06	k: 4	n:1820000
ZNF845   1820000 perm   1613 sec   (1129 perm/sec)   p_kst 2.197802e-06   p_cons 9.998319e-01   p_joint 6.703297e-05

Joint ci ratio: 3.534425e-01	ci left: 5.536294e-05	ci right 7.959958e-05	k: 122	n:1830000
Cons ci ratio: 3.759640e-05	ci left: 9.998124e-01	ci right 9.998505e-01	k: 1829693	n:1830000
KS ci ratio: 1.753074e+00	ci left: 5.955552e-07	ci right 5.596487e-06	k: 4	n:1830000
ZNF845   1830000 perm   1628 sec   (1124 perm/sec)   p_kst 2.185792e-06   p_cons 9.998322e-01   p_joint 6.666667e-05

Joint ci ratio: 3.520144e-01	ci left: 5.555738e-05	ci right 7.975841e-05	k: 123	n:1840000
Cons ci ratio: 3.745272e-05	ci left: 9.998128e-01	ci right 9.998508e-01	k: 1839692	n:1840000
KS ci ratio: 1.753074e+00	ci left: 5.923184e-07	ci right 5.566071e-06	k: 4	n:1840000
ZNF845   1840000 perm   1644 sec   (1119 perm/sec)   p_kst 2.173913e-06   p_cons 9.998326e-01   p_joint 6.684783e-05

Joint ci ratio: 3.520145e-01	ci left: 5.525707e-05	ci right 7.932729e-05	k: 123	n:1850000
Cons ci ratio: 3.731049e-05	ci left: 9.998133e-01	ci right 9.998511e-01	k: 1849691	n:1850000
KS ci ratio: 1.753074e+00	ci left: 5.891167e-07	ci right 5.535985e-06	k: 4	n:1850000
ZNF845   1850000 perm   1660 sec   (1115 perm/sec)   p_kst 2.162162e-06   p_cons 9.998330e-01   p_joint 6.648649e-05

Joint ci ratio: 3.492094e-01	ci left: 5.594057e-05	ci right 8.007038e-05	k: 125	n:1860000
Cons ci ratio: 3.734857e-05	ci left: 9.998120e-01	ci right 9.998498e-01	k: 1859687	n:1860000
KS ci ratio: 1.753074e+00	ci left: 5.859494e-07	ci right 5.506221e-06	k: 4	n:1860000
ZNF845   1860000 perm   1676 sec   (1110 perm/sec)   p_kst 2.150538e-06   p_cons 9.998317e-01   p_joint 6.720430e-05

Joint ci ratio: 3.492095e-01	ci left: 5.564142e-05	ci right 7.964219e-05	k: 125	n:1870000
Cons ci ratio: 3.714883e-05	ci left: 9.998130e-01	ci right 9.998507e-01	k: 1869687	n:1870000
KS ci ratio: 1.753074e+00	ci left: 5.828160e-07	ci right 5.476776e-06	k: 4	n:1870000
ZNF845   1870000 perm   1691 sec   (1106 perm/sec)   p_kst 2.139037e-06   p_cons 9.998326e-01   p_joint 6.684492e-05

Joint ci ratio: 3.492096e-01	ci left: 5.534545e-05	ci right 7.921857e-05	k: 125	n:1880000
Cons ci ratio: 3.706873e-05	ci left: 9.998129e-01	ci right 9.998504e-01	k: 1879685	n:1880000
KS ci ratio: 1.753074e+00	ci left: 5.797159e-07	ci right 5.447645e-06	k: 4	n:1880000
ZNF845   1880000 perm   1707 sec   (1101 perm/sec)   p_kst 2.127660e-06   p_cons 9.998324e-01   p_joint 6.648936e-05

Joint ci ratio: 3.478320e-01	ci left: 5.553541e-05	ci right 7.937466e-05	k: 126	n:1890000
Cons ci ratio: 3.704723e-05	ci left: 9.998122e-01	ci right 9.998497e-01	k: 1889682	n:1890000
KS ci ratio: 1.753075e+00	ci left: 5.766486e-07	ci right 5.418821e-06	k: 4	n:1890000
ZNF845   1890000 perm   1723 sec   (1097 perm/sec)   p_kst 2.116402e-06   p_cons 9.998317e-01   p_joint 6.666667e-05

Joint ci ratio: 3.464706e-01	ci left: 5.572355e-05	ci right 7.952892e-05	k: 127	n:1900000
Cons ci ratio: 3.696759e-05	ci left: 9.998121e-01	ci right 9.998495e-01	k: 1899680	n:1900000
KS ci ratio: 1.753075e+00	ci left: 5.736136e-07	ci right 5.390301e-06	k: 4	n:1900000
ZNF845   1900000 perm   1739 sec   (1093 perm/sec)   p_kst 2.105263e-06   p_cons 9.998316e-01   p_joint 6.684211e-05

Joint ci ratio: 3.451250e-01	ci left: 5.590989e-05	ci right 7.968139e-05	k: 128	n:1910000
Cons ci ratio: 3.683127e-05	ci left: 9.998125e-01	ci right 9.998498e-01	k: 1909679	n:1910000
KS ci ratio: 1.753075e+00	ci left: 5.706104e-07	ci right 5.362080e-06	k: 4	n:1910000
ZNF845   1910000 perm   1755 sec   (1088 perm/sec)   p_kst 2.094241e-06   p_cons 9.998319e-01   p_joint 6.701571e-05

Joint ci ratio: 3.437950e-01	ci left: 5.609448e-05	ci right 7.983210e-05	k: 129	n:1920000
Cons ci ratio: 3.669628e-05	ci left: 9.998129e-01	ci right 9.998501e-01	k: 1919678	n:1920000
KS ci ratio: 1.753075e+00	ci left: 5.676385e-07	ci right 5.334152e-06	k: 4	n:1920000
ZNF845   1920000 perm   1771 sec   (1084 perm/sec)   p_kst 2.083333e-06   p_cons 9.998323e-01   p_joint 6.718750e-05

Joint ci ratio: 3.424803e-01	ci left: 5.627732e-05	ci right 7.998107e-05	k: 130	n:1930000
Cons ci ratio: 3.673152e-05	ci left: 9.998117e-01	ci right 9.998489e-01	k: 1929674	n:1930000
KS ci ratio: 1.753075e+00	ci left: 5.646974e-07	ci right 5.306514e-06	k: 4	n:1930000
ZNF845   1930000 perm   1788 sec   (1080 perm/sec)   p_kst 2.072539e-06   p_cons 9.998311e-01   p_joint 6.735751e-05

Joint ci ratio: 3.478323e-01	ci left: 5.410408e-05	ci right 7.732893e-05	k: 126	n:1940000
Cons ci ratio: 3.659801e-05	ci left: 9.998121e-01	ci right 9.998492e-01	k: 1939673	n:1940000
KS ci ratio: 1.753075e+00	ci left: 5.617866e-07	ci right 5.279161e-06	k: 4	n:1940000
ZNF845   1940000 perm   1804 sec   (1075 perm/sec)   p_kst 2.061856e-06   p_cons 9.998314e-01   p_joint 6.494845e-05

Joint ci ratio: 3.464709e-01	ci left: 5.429473e-05	ci right 7.748973e-05	k: 127	n:1950000
Cons ci ratio: 3.641031e-05	ci left: 9.998131e-01	ci right 9.998500e-01	k: 1949673	n:1950000
KS ci ratio: 1.753075e+00	ci left: 5.589056e-07	ci right 5.252088e-06	k: 4	n:1950000
ZNF845   1950000 perm   1821 sec   (1071 perm/sec)   p_kst 2.051282e-06   p_cons 9.998323e-01   p_joint 6.512821e-05

Joint ci ratio: 3.464709e-01	ci left: 5.401772e-05	ci right 7.709438e-05	k: 127	n:1960000
Cons ci ratio: 3.633482e-05	ci left: 9.998130e-01	ci right 9.998498e-01	k: 1959671	n:1960000
KS ci ratio: 1.753075e+00	ci left: 5.560540e-07	ci right 5.225292e-06	k: 4	n:1960000
ZNF845   1960000 perm   1837 sec   (1067 perm/sec)   p_kst 2.040816e-06   p_cons 9.998321e-01   p_joint 6.479592e-05

Joint ci ratio: 3.464710e-01	ci left: 5.374351e-05	ci right 7.670304e-05	k: 127	n:1970000
Cons ci ratio: 3.615036e-05	ci left: 9.998139e-01	ci right 9.998506e-01	k: 1969671	n:1970000
KS ci ratio: 1.753075e+00	ci left: 5.532314e-07	ci right 5.198768e-06	k: 4	n:1970000
ZNF845   1970000 perm   1854 sec   (1063 perm/sec)   p_kst 2.030457e-06   p_cons 9.998330e-01   p_joint 6.446701e-05

Joint ci ratio: 3.464710e-01	ci left: 5.347208e-05	ci right 7.631565e-05	k: 127	n:1980000
Cons ci ratio: 3.607662e-05	ci left: 9.998138e-01	ci right 9.998504e-01	k: 1979669	n:1980000
KS ci ratio: 1.753075e+00	ci left: 5.504373e-07	ci right 5.172511e-06	k: 4	n:1980000
ZNF845   1980000 perm   1870 sec   (1059 perm/sec)   p_kst 2.020202e-06   p_cons 9.998328e-01   p_joint 6.414141e-05

Joint ci ratio: 3.464711e-01	ci left: 5.320337e-05	ci right 7.593216e-05	k: 127	n:1990000
Cons ci ratio: 3.594934e-05	ci left: 9.998142e-01	ci right 9.998506e-01	k: 1989668	n:1990000
KS ci ratio: 1.753075e+00	ci left: 5.476713e-07	ci right 5.146519e-06	k: 4	n:1990000
ZNF845   1990000 perm   1887 sec   (1054 perm/sec)   p_kst 2.010050e-06   p_cons 9.998332e-01   p_joint 6.381910e-05

Joint ci ratio: 3.520154e-01	ci left: 5.111277e-05	ci right 7.337777e-05	k: 123	n:2000000
Cons ci ratio: 3.582325e-05	ci left: 9.998146e-01	ci right 9.998509e-01	k: 1999667	n:2000000
KS ci ratio: 1.753075e+00	ci left: 5.449329e-07	ci right 5.120786e-06	k: 4	n:2000000
ZNF845   2000000 perm   1904 sec   (1050 perm/sec)   p_kst 2.000000e-06   p_cons 9.998335e-01   p_joint 6.150000e-05

Joint ci ratio: 3.492103e-01	ci left: 5.176588e-05	ci right 7.409501e-05	k: 125	n:2010000
Cons ci ratio: 3.569834e-05	ci left: 9.998150e-01	ci right 9.998512e-01	k: 2009666	n:2010000
KS ci ratio: 1.753075e+00	ci left: 5.422218e-07	ci right 5.095310e-06	k: 4	n:2010000
ZNF845   2010000 perm   1921 sec   (1046 perm/sec)   p_kst 1.990050e-06   p_cons 9.998338e-01   p_joint 6.218905e-05

Joint ci ratio: 3.478327e-01	ci left: 5.196133e-05	ci right 7.426642e-05	k: 126	n:2020000
Cons ci ratio: 3.568033e-05	ci left: 9.998144e-01	ci right 9.998505e-01	k: 2019663	n:2020000
KS ci ratio: 1.753075e+00	ci left: 5.395376e-07	ci right 5.070086e-06	k: 4	n:2020000
ZNF845   2020000 perm   1938 sec   (1042 perm/sec)   p_kst 1.980198e-06   p_cons 9.998332e-01   p_joint 6.237624e-05

Joint ci ratio: 3.578347e-01	ci left: 4.856261e-05	ci right 7.014799e-05	k: 119	n:2030000
Cons ci ratio: 3.555704e-05	ci left: 9.998148e-01	ci right 9.998508e-01	k: 2029662	n:2030000
KS ci ratio: 1.753075e+00	ci left: 5.368797e-07	ci right 5.045110e-06	k: 4	n:2030000
ZNF845   2030000 perm   1956 sec   (1038 perm/sec)   p_kst 1.970443e-06   p_cons 9.998335e-01   p_joint 5.862069e-05

Joint ci ratio: 3.578348e-01	ci left: 4.832456e-05	ci right 6.980413e-05	k: 119	n:2040000
Cons ci ratio: 3.548696e-05	ci left: 9.998146e-01	ci right 9.998506e-01	k: 2039660	n:2040000
KS ci ratio: 1.753075e+00	ci left: 5.342480e-07	ci right 5.020379e-06	k: 4	n:2040000
ZNF845   2040000 perm   1973 sec   (1034 perm/sec)   p_kst 1.960784e-06   p_cons 9.998333e-01   p_joint 5.833333e-05

Joint ci ratio: 3.563530e-01	ci left: 4.853288e-05	ci right 6.999501e-05	k: 120	n:2050000
Cons ci ratio: 3.546887e-05	ci left: 9.998140e-01	ci right 9.998499e-01	k: 2049657	n:2050000
KS ci ratio: 1.753075e+00	ci left: 5.316419e-07	ci right 4.995889e-06	k: 4	n:2050000
ZNF845   2050000 perm   1990 sec   (1030 perm/sec)   p_kst 1.951220e-06   p_cons 9.998327e-01   p_joint 5.853659e-05

Joint ci ratio: 3.639525e-01	ci left: 4.608968e-05	ci right 6.700937e-05	k: 115	n:2060000
Cons ci ratio: 3.529668e-05	ci left: 9.998149e-01	ci right 9.998507e-01	k: 2059657	n:2060000
KS ci ratio: 1.753075e+00	ci left: 5.290611e-07	ci right 4.971637e-06	k: 4	n:2060000
ZNF845   2060000 perm   2008 sec   (1026 perm/sec)   p_kst 1.941748e-06   p_cons 9.998335e-01   p_joint 5.582524e-05

Joint ci ratio: 3.623938e-01	ci left: 4.630603e-05	ci right 6.721264e-05	k: 116	n:2070000
Cons ci ratio: 3.512615e-05	ci left: 9.998158e-01	ci right 9.998514e-01	k: 2069657	n:2070000
KS ci ratio: 1.753075e+00	ci left: 5.265053e-07	ci right 4.947620e-06	k: 4	n:2070000
ZNF845   2070000 perm   2025 sec   (1022 perm/sec)   p_kst 1.932367e-06   p_cons 9.998343e-01   p_joint 5.603865e-05

Joint ci ratio: 3.608549e-01	ci left: 4.652050e-05	ci right 6.741377e-05	k: 117	n:2080000
Cons ci ratio: 3.515994e-05	ci left: 9.998147e-01	ci right 9.998503e-01	k: 2079653	n:2080000
KS ci ratio: 1.753075e+00	ci left: 5.239740e-07	ci right 4.923833e-06	k: 4	n:2080000
ZNF845   2080000 perm   2043 sec   (1018 perm/sec)   p_kst 1.923077e-06   p_cons 9.998332e-01   p_joint 5.625000e-05

Joint ci ratio: 3.639527e-01	ci left: 4.542810e-05	ci right 6.604752e-05	k: 115	n:2090000
Cons ci ratio: 3.499170e-05	ci left: 9.998156e-01	ci right 9.998510e-01	k: 2089653	n:2090000
KS ci ratio: 1.753075e+00	ci left: 5.214669e-07	ci right 4.900274e-06	k: 4	n:2090000
ZNF845   2090000 perm   2061 sec   (1014 perm/sec)   p_kst 1.913876e-06   p_cons 9.998340e-01   p_joint 5.502392e-05

Joint ci ratio: 3.608550e-01	ci left: 4.607744e-05	ci right 6.677174e-05	k: 117	n:2100000
Cons ci ratio: 3.487507e-05	ci left: 9.998159e-01	ci right 9.998512e-01	k: 2099652	n:2100000
KS ci ratio: 1.753075e+00	ci left: 5.189837e-07	ci right 4.876940e-06	k: 4	n:2100000
ZNF845   2100000 perm   2078 sec   (1010 perm/sec)   p_kst 1.904762e-06   p_cons 9.998343e-01   p_joint 5.571429e-05

Joint ci ratio: 3.593356e-01	ci left: 4.629013e-05	ci right 6.697192e-05	k: 118	n:2110000
Cons ci ratio: 3.485866e-05	ci left: 9.998153e-01	ci right 9.998506e-01	k: 2109649	n:2110000
KS ci ratio: 1.753075e+00	ci left: 5.165241e-07	ci right 4.853826e-06	k: 4	n:2110000
ZNF845   2110000 perm   2096 sec   (1007 perm/sec)   p_kst 1.895735e-06   p_cons 9.998336e-01   p_joint 5.592417e-05

Joint ci ratio: 3.563534e-01	ci left: 4.693037e-05	ci right 6.768386e-05	k: 120	n:2120000
Cons ci ratio: 3.474347e-05	ci left: 9.998157e-01	ci right 9.998509e-01	k: 2119648	n:2120000
KS ci ratio: 1.753075e+00	ci left: 5.140877e-07	ci right 4.830931e-06	k: 4	n:2120000
ZNF845   2120000 perm   2113 sec   (1003 perm/sec)   p_kst 1.886792e-06   p_cons 9.998340e-01   p_joint 5.660377e-05

Joint ci ratio: 3.563534e-01	ci left: 4.671004e-05	ci right 6.736610e-05	k: 120	n:2130000
Cons ci ratio: 3.472700e-05	ci left: 9.998151e-01	ci right 9.998502e-01	k: 2129645	n:2130000
KS ci ratio: 1.753075e+00	ci left: 5.116741e-07	ci right 4.808251e-06	k: 4	n:2130000
ZNF845   2130000 perm   2130 sec   (1000 perm/sec)   p_kst 1.877934e-06   p_cons 9.998333e-01   p_joint 5.633803e-05

Joint ci ratio: 3.548899e-01	ci left: 4.691731e-05	ci right 6.756017e-05	k: 121	n:2140000
Cons ci ratio: 3.466168e-05	ci left: 9.998149e-01	ci right 9.998500e-01	k: 2139643	n:2140000
KS ci ratio: 1.753075e+00	ci left: 5.092831e-07	ci right 4.785782e-06	k: 4	n:2140000
ZNF845   2140000 perm   2149 sec   (996 perm/sec)   p_kst 1.869159e-06   p_cons 9.998332e-01   p_joint 5.654206e-05

Joint ci ratio: 3.548900e-01	ci left: 4.669909e-05	ci right 6.724594e-05	k: 121	n:2150000
Cons ci ratio: 3.469269e-05	ci left: 9.998138e-01	ci right 9.998490e-01	k: 2149639	n:2150000
KS ci ratio: 1.753075e+00	ci left: 5.069144e-07	ci right 4.763523e-06	k: 4	n:2150000
ZNF845   2150000 perm   2166 sec   (992 perm/sec)   p_kst 1.860465e-06   p_cons 9.998321e-01   p_joint 5.627907e-05

Joint ci ratio: 3.534444e-01	ci left: 4.690467e-05	ci right 6.743860e-05	k: 122	n:2160000
Cons ci ratio: 3.457973e-05	ci left: 9.998142e-01	ci right 9.998492e-01	k: 2159638	n:2160000
KS ci ratio: 1.753075e+00	ci left: 5.045675e-07	ci right 4.741469e-06	k: 4	n:2160000
ZNF845   2160000 perm   2185 sec   (989 perm/sec)   p_kst 1.851852e-06   p_cons 9.998324e-01   p_joint 5.648148e-05

Joint ci ratio: 3.534444e-01	ci left: 4.668852e-05	ci right 6.712782e-05	k: 122	n:2170000
Cons ci ratio: 3.446775e-05	ci left: 9.998146e-01	ci right 9.998495e-01	k: 2169637	n:2170000
KS ci ratio: 1.753075e+00	ci left: 5.022423e-07	ci right 4.719619e-06	k: 4	n:2170000
ZNF845   2170000 perm   2204 sec   (985 perm/sec)   p_kst 1.843318e-06   p_cons 9.998327e-01   p_joint 5.622120e-05

Joint ci ratio: 3.520163e-01	ci left: 4.689243e-05	ci right 6.731909e-05	k: 123	n:2180000
Cons ci ratio: 3.440377e-05	ci left: 9.998145e-01	ci right 9.998493e-01	k: 2179635	n:2180000
KS ci ratio: 1.753075e+00	ci left: 4.999385e-07	ci right 4.697970e-06	k: 4	n:2180000
ZNF845   2180000 perm   2222 sec   (981 perm/sec)   p_kst 1.834862e-06   p_cons 9.998326e-01   p_joint 5.642202e-05

Joint ci ratio: 3.520163e-01	ci left: 4.667830e-05	ci right 6.701170e-05	k: 123	n:2190000
Cons ci ratio: 3.438676e-05	ci left: 9.998139e-01	ci right 9.998487e-01	k: 2189632	n:2190000
KS ci ratio: 1.753075e+00	ci left: 4.976556e-07	ci right 4.676518e-06	k: 4	n:2190000
ZNF845   2190000 perm   2240 sec   (978 perm/sec)   p_kst 1.826484e-06   p_cons 9.998320e-01   p_joint 5.616438e-05

Joint ci ratio: 3.520164e-01	ci left: 4.646613e-05	ci right 6.670710e-05	k: 123	n:2200000
Cons ci ratio: 3.427680e-05	ci left: 9.998143e-01	ci right 9.998490e-01	k: 2199631	n:2200000
KS ci ratio: 1.753075e+00	ci left: 4.953936e-07	ci right 4.655261e-06	k: 4	n:2200000
ZNF845   2200000 perm   2258 sec   (974 perm/sec)   p_kst 1.818182e-06   p_cons 9.998323e-01   p_joint 5.590909e-05

Joint ci ratio: 3.703957e-01	ci left: 4.131842e-05	ci right 6.048504e-05	k: 111	n:2210000
Cons ci ratio: 3.421380e-05	ci left: 9.998141e-01	ci right 9.998488e-01	k: 2209629	n:2210000
KS ci ratio: 1.753075e+00	ci left: 4.931520e-07	ci right 4.634196e-06	k: 4	n:2210000
ZNF845   2210000 perm   2277 sec   (971 perm/sec)   p_kst 1.809955e-06   p_cons 9.998321e-01   p_joint 5.022624e-05

Joint ci ratio: 3.754586e-01	ci left: 3.990759e-05	ci right 5.873516e-05	k: 108	n:2220000
Cons ci ratio: 3.405967e-05	ci left: 9.998150e-01	ci right 9.998495e-01	k: 2219629	n:2220000
KS ci ratio: 1.753075e+00	ci left: 4.909306e-07	ci right 4.613322e-06	k: 4	n:2220000
ZNF845   2220000 perm   2296 sec   (967 perm/sec)   p_kst 1.801802e-06   p_cons 9.998329e-01   p_joint 4.864865e-05

Joint ci ratio: 3.720606e-01	ci left: 4.054126e-05	ci right 5.945250e-05	k: 110	n:2230000
Cons ci ratio: 3.404340e-05	ci left: 9.998144e-01	ci right 9.998489e-01	k: 2229626	n:2230000
KS ci ratio: 1.753075e+00	ci left: 4.887291e-07	ci right 4.592634e-06	k: 4	n:2230000
ZNF845   2230000 perm   2314 sec   (964 perm/sec)   p_kst 1.793722e-06   p_cons 9.998323e-01   p_joint 4.932735e-05

Joint ci ratio: 3.720606e-01	ci left: 4.036027e-05	ci right 5.918709e-05	k: 110	n:2240000
Cons ci ratio: 3.393657e-05	ci left: 9.998148e-01	ci right 9.998491e-01	k: 2239625	n:2240000
KS ci ratio: 1.753075e+00	ci left: 4.865472e-07	ci right 4.572131e-06	k: 4	n:2240000
ZNF845   2240000 perm   2333 sec   (960 perm/sec)   p_kst 1.785714e-06   p_cons 9.998326e-01   p_joint 4.910714e-05

Joint ci ratio: 3.754587e-01	ci left: 3.937549e-05	ci right 5.795203e-05	k: 108	n:2250000
Cons ci ratio: 3.383063e-05	ci left: 9.998151e-01	ci right 9.998494e-01	k: 2249624	n:2250000
KS ci ratio: 1.753075e+00	ci left: 4.843848e-07	ci right 4.551811e-06	k: 4	n:2250000
ZNF845   2250000 perm   2352 sec   (957 perm/sec)   p_kst 1.777778e-06   p_cons 9.998329e-01   p_joint 4.800000e-05

Joint ci ratio: 3.754588e-01	ci left: 3.920126e-05	ci right 5.769560e-05	k: 108	n:2260000
Cons ci ratio: 3.385917e-05	ci left: 9.998141e-01	ci right 9.998483e-01	k: 2259620	n:2260000
KS ci ratio: 1.753075e+00	ci left: 4.822415e-07	ci right 4.531670e-06	k: 4	n:2260000
ZNF845   2260000 perm   2371 sec   (953 perm/sec)   p_kst 1.769912e-06   p_cons 9.998319e-01   p_joint 4.778761e-05

Joint ci ratio: 3.703960e-01	ci left: 4.022630e-05	ci right 5.888633e-05	k: 111	n:2270000
Cons ci ratio: 3.370999e-05	ci left: 9.998149e-01	ci right 9.998490e-01	k: 2269620	n:2270000
KS ci ratio: 1.753075e+00	ci left: 4.801171e-07	ci right 4.511707e-06	k: 4	n:2270000
ZNF845   2270000 perm   2390 sec   (950 perm/sec)   p_kst 1.762115e-06   p_cons 9.998326e-01   p_joint 4.889868e-05

Joint ci ratio: 3.789517e-01	ci left: 3.806336e-05	ci right 5.622953e-05	k: 106	n:2280000
Cons ci ratio: 3.356213e-05	ci left: 9.998157e-01	ci right 9.998497e-01	k: 2279620	n:2280000
KS ci ratio: 1.753075e+00	ci left: 4.780113e-07	ci right 4.491919e-06	k: 4	n:2280000
ZNF845   2280000 perm   2409 sec   (946 perm/sec)   p_kst 1.754386e-06   p_cons 9.998333e-01   p_joint 4.649123e-05

Joint ci ratio: 3.771932e-01	ci left: 3.829233e-05	ci right 5.646197e-05	k: 107	n:2290000
Cons ci ratio: 3.350316e-05	ci left: 9.998156e-01	ci right 9.998495e-01	k: 2289618	n:2290000
KS ci ratio: 1.753075e+00	ci left: 4.759239e-07	ci right 4.472303e-06	k: 4	n:2290000
ZNF845   2290000 perm   2428 sec   (943 perm/sec)   p_kst 1.746725e-06   p_cons 9.998332e-01   p_joint 4.672489e-05

Joint ci ratio: 3.737483e-01	ci left: 3.891335e-05	ci right 5.716774e-05	k: 109	n:2300000
Cons ci ratio: 3.344448e-05	ci left: 9.998155e-01	ci right 9.998493e-01	k: 2299616	n:2300000
KS ci ratio: 1.600331e+00	ci left: 7.058640e-07	ci right 5.073181e-06	k: 5	n:2300000
ZNF845   2300000 perm   2447 sec   (940 perm/sec)   p_kst 2.173913e-06   p_cons 9.998330e-01   p_joint 4.739130e-05

Joint ci ratio: 3.737484e-01	ci left: 3.874489e-05	ci right 5.692026e-05	k: 109	n:2310000
Cons ci ratio: 3.329969e-05	ci left: 9.998163e-01	ci right 9.998500e-01	k: 2309616	n:2310000
KS ci ratio: 1.600331e+00	ci left: 7.028083e-07	ci right 5.051219e-06	k: 5	n:2310000
ZNF845   2310000 perm   2466 sec   (937 perm/sec)   p_kst 2.164502e-06   p_cons 9.998338e-01   p_joint 4.718615e-05

Joint ci ratio: 3.862404e-01	ci left: 3.584876e-05	ci right 5.337089e-05	k: 102	n:2320000
Cons ci ratio: 3.319918e-05	ci left: 9.998166e-01	ci right 9.998502e-01	k: 2319615	n:2320000
KS ci ratio: 1.600331e+00	ci left: 6.997790e-07	ci right 5.029446e-06	k: 5	n:2320000
ZNF845   2320000 perm   2485 sec   (934 perm/sec)   p_kst 2.155172e-06   p_cons 9.998341e-01   p_joint 4.396552e-05

Joint ci ratio: 3.862405e-01	ci left: 3.569490e-05	ci right 5.314183e-05	k: 102	n:2330000
Cons ci ratio: 3.314223e-05	ci left: 9.998165e-01	ci right 9.998500e-01	k: 2329613	n:2330000
KS ci ratio: 1.600331e+00	ci left: 6.967756e-07	ci right 5.007861e-06	k: 5	n:2330000
ZNF845   2330000 perm   2505 sec   (930 perm/sec)   p_kst 2.145923e-06   p_cons 9.998339e-01   p_joint 4.377682e-05

Joint ci ratio: 3.843790e-01	ci left: 3.592832e-05	ci right 5.338328e-05	k: 103	n:2340000
Cons ci ratio: 3.308554e-05	ci left: 9.998164e-01	ci right 9.998499e-01	k: 2339611	n:2340000
KS ci ratio: 1.600331e+00	ci left: 6.937980e-07	ci right 4.986460e-06	k: 5	n:2340000
ZNF845   2340000 perm   2524 sec   (927 perm/sec)   p_kst 2.136752e-06   p_cons 9.998338e-01   p_joint 4.401709e-05

Joint ci ratio: 3.843790e-01	ci left: 3.577543e-05	ci right 5.315612e-05	k: 103	n:2350000
Cons ci ratio: 3.298696e-05	ci left: 9.998167e-01	ci right 9.998501e-01	k: 2349610	n:2350000
KS ci ratio: 1.600331e+00	ci left: 6.908456e-07	ci right 4.965241e-06	k: 5	n:2350000
ZNF845   2350000 perm   2544 sec   (924 perm/sec)   p_kst 2.127660e-06   p_cons 9.998340e-01   p_joint 4.382979e-05

Joint ci ratio: 3.843791e-01	ci left: 3.562384e-05	ci right 5.293088e-05	k: 103	n:2360000
Cons ci ratio: 3.293109e-05	ci left: 9.998166e-01	ci right 9.998499e-01	k: 2359608	n:2360000
KS ci ratio: 1.600331e+00	ci left: 6.879183e-07	ci right 4.944202e-06	k: 5	n:2360000
ZNF845   2360000 perm   2563 sec   (921 perm/sec)   p_kst 2.118644e-06   p_cons 9.998339e-01   p_joint 4.364407e-05

Joint ci ratio: 3.825443e-01	ci left: 3.585479e-05	ci right 5.316997e-05	k: 104	n:2370000
Cons ci ratio: 3.279212e-05	ci left: 9.998174e-01	ci right 9.998506e-01	k: 2369608	n:2370000
KS ci ratio: 1.600331e+00	ci left: 6.850157e-07	ci right 4.923340e-06	k: 5	n:2370000
ZNF845   2370000 perm   2583 sec   (918 perm/sec)   p_kst 2.109705e-06   p_cons 9.998346e-01   p_joint 4.388186e-05

Joint ci ratio: 3.825443e-01	ci left: 3.570414e-05	ci right 5.294656e-05	k: 104	n:2380000
Cons ci ratio: 3.269586e-05	ci left: 9.998177e-01	ci right 9.998508e-01	k: 2379607	n:2380000
KS ci ratio: 1.600331e+00	ci left: 6.821375e-07	ci right 4.902654e-06	k: 5	n:2380000
ZNF845   2380000 perm   2603 sec   (914 perm/sec)   p_kst 2.100840e-06   p_cons 9.998349e-01   p_joint 4.369748e-05

Joint ci ratio: 3.807355e-01	ci left: 3.593302e-05	ci right 5.318339e-05	k: 105	n:2390000
Cons ci ratio: 3.260034e-05	ci left: 9.998180e-01	ci right 9.998510e-01	k: 2389606	n:2390000
KS ci ratio: 1.600331e+00	ci left: 6.792833e-07	ci right 4.882141e-06	k: 5	n:2390000
ZNF845   2390000 perm   2623 sec   (911 perm/sec)   p_kst 2.092050e-06   p_cons 9.998351e-01   p_joint 4.393305e-05

Joint ci ratio: 3.807356e-01	ci left: 3.578330e-05	ci right 5.296180e-05	k: 105	n:2400000
Cons ci ratio: 3.254659e-05	ci left: 9.998179e-01	ci right 9.998509e-01	k: 2399604	n:2400000
KS ci ratio: 1.600331e+00	ci left: 6.764530e-07	ci right 4.861798e-06	k: 5	n:2400000
ZNF845   2400000 perm   2643 sec   (908 perm/sec)   p_kst 2.083333e-06   p_cons 9.998350e-01   p_joint 4.375000e-05

Joint ci ratio: 3.807356e-01	ci left: 3.563482e-05	ci right 5.274204e-05	k: 105	n:2410000
Cons ci ratio: 3.253379e-05	ci left: 9.998174e-01	ci right 9.998503e-01	k: 2409601	n:2410000
KS ci ratio: 1.600331e+00	ci left: 6.736461e-07	ci right 4.841625e-06	k: 5	n:2410000
ZNF845   2410000 perm   2663 sec   (905 perm/sec)   p_kst 2.074689e-06   p_cons 9.998344e-01   p_joint 4.356846e-05

Joint ci ratio: 3.771937e-01	ci left: 3.623530e-05	ci right 5.342891e-05	k: 107	n:2420000
Cons ci ratio: 3.243982e-05	ci left: 9.998177e-01	ci right 9.998505e-01	k: 2419600	n:2420000
KS ci ratio: 1.600331e+00	ci left: 6.708625e-07	ci right 4.821618e-06	k: 5	n:2420000
ZNF845   2420000 perm   2683 sec   (902 perm/sec)   p_kst 2.066116e-06   p_cons 9.998347e-01   p_joint 4.421488e-05

Joint ci ratio: 3.771937e-01	ci left: 3.608618e-05	ci right 5.320903e-05	k: 107	n:2430000
Cons ci ratio: 3.238679e-05	ci left: 9.998176e-01	ci right 9.998503e-01	k: 2429598	n:2430000
KS ci ratio: 1.600331e+00	ci left: 6.681017e-07	ci right 4.801776e-06	k: 5	n:2430000
ZNF845   2430000 perm   2703 sec   (899 perm/sec)   p_kst 2.057613e-06   p_cons 9.998346e-01   p_joint 4.403292e-05

Joint ci ratio: 3.771938e-01	ci left: 3.593828e-05	ci right 5.299097e-05	k: 107	n:2440000
Cons ci ratio: 3.225404e-05	ci left: 9.998183e-01	ci right 9.998510e-01	k: 2439598	n:2440000
KS ci ratio: 1.600331e+00	ci left: 6.653636e-07	ci right 4.782097e-06	k: 5	n:2440000
ZNF845   2440000 perm   2723 sec   (896 perm/sec)   p_kst 2.049180e-06   p_cons 9.998352e-01   p_joint 4.385246e-05

Joint ci ratio: 3.771938e-01	ci left: 3.579160e-05	ci right 5.277468e-05	k: 107	n:2450000
Cons ci ratio: 3.220201e-05	ci left: 9.998182e-01	ci right 9.998508e-01	k: 2449596	n:2450000
KS ci ratio: 1.600331e+00	ci left: 6.626478e-07	ci right 4.762578e-06	k: 5	n:2450000
ZNF845   2450000 perm   2743 sec   (893 perm/sec)   p_kst 2.040816e-06   p_cons 9.998351e-01   p_joint 4.367347e-05

Joint ci ratio: 3.754595e-01	ci left: 3.601416e-05	ci right 5.300493e-05	k: 108	n:2460000
Cons ci ratio: 3.215020e-05	ci left: 9.998181e-01	ci right 9.998506e-01	k: 2459594	n:2460000
KS ci ratio: 1.600331e+00	ci left: 6.599541e-07	ci right 4.743218e-06	k: 5	n:2460000
ZNF845   2460000 perm   2763 sec   (890 perm/sec)   p_kst 2.032520e-06   p_cons 9.998350e-01   p_joint 4.390244e-05

Joint ci ratio: 3.771939e-01	ci left: 3.550178e-05	ci right 5.234735e-05	k: 107	n:2470000
Cons ci ratio: 3.217701e-05	ci left: 9.998171e-01	ci right 9.998497e-01	k: 2469590	n:2470000
KS ci ratio: 1.600331e+00	ci left: 6.572823e-07	ci right 4.724015e-06	k: 5	n:2470000
ZNF845   2470000 perm   2783 sec   (887 perm/sec)   p_kst 2.024291e-06   p_cons 9.998340e-01   p_joint 4.331984e-05

Joint ci ratio: 3.771939e-01	ci left: 3.535863e-05	ci right 5.213628e-05	k: 107	n:2480000
Cons ci ratio: 3.208623e-05	ci left: 9.998175e-01	ci right 9.998499e-01	k: 2479589	n:2480000
KS ci ratio: 1.600331e+00	ci left: 6.546319e-07	ci right 4.704966e-06	k: 5	n:2480000
ZNF845   2480000 perm   2804 sec   (885 perm/sec)   p_kst 2.016129e-06   p_cons 9.998343e-01   p_joint 4.314516e-05

Joint ci ratio: 3.771939e-01	ci left: 3.521663e-05	ci right 5.192689e-05	k: 107	n:2490000
Cons ci ratio: 3.211214e-05	ci left: 9.998165e-01	ci right 9.998490e-01	k: 2489585	n:2490000
KS ci ratio: 1.600331e+00	ci left: 6.520029e-07	ci right 4.686071e-06	k: 5	n:2490000
ZNF845   2490000 perm   2824 sec   (882 perm/sec)   p_kst 2.008032e-06   p_cons 9.998333e-01   p_joint 4.297189e-05

Joint ci ratio: 3.754596e-01	ci left: 3.543793e-05	ci right 5.215685e-05	k: 108	n:2500000
Cons ci ratio: 3.206048e-05	ci left: 9.998164e-01	ci right 9.998488e-01	k: 2499583	n:2500000
KS ci ratio: 1.481618e+00	ci left: 8.807582e-07	ci right 5.223782e-06	k: 6	n:2500000
ZNF845   2500000 perm   2845 sec   (879 perm/sec)   p_kst 2.400000e-06   p_cons 9.998332e-01   p_joint 4.320000e-05

Joint ci ratio: 3.737491e-01	ci left: 3.565764e-05	ci right 5.238480e-05	k: 109	n:2510000
Cons ci ratio: 3.200906e-05	ci left: 9.998163e-01	ci right 9.998487e-01	k: 2509581	n:2510000
KS ci ratio: 1.481618e+00	ci left: 8.772492e-07	ci right 5.202970e-06	k: 6	n:2510000
ZNF845   2510000 perm   2865 sec   (876 perm/sec)   p_kst 2.390438e-06   p_cons 9.998331e-01   p_joint 4.342629e-05

Joint ci ratio: 3.754597e-01	ci left: 3.515667e-05	ci right 5.174291e-05	k: 108	n:2520000
Cons ci ratio: 3.188203e-05	ci left: 9.998170e-01	ci right 9.998493e-01	k: 2519581	n:2520000
KS ci ratio: 1.481618e+00	ci left: 8.737680e-07	ci right 5.182324e-06	k: 6	n:2520000
ZNF845   2520000 perm   2886 sec   (873 perm/sec)   p_kst 2.380952e-06   p_cons 9.998337e-01   p_joint 4.285714e-05

Joint ci ratio: 3.807360e-01	ci left: 3.394463e-05	ci right 5.024045e-05	k: 105	n:2530000
Cons ci ratio: 3.183153e-05	ci left: 9.998169e-01	ci right 9.998491e-01	k: 2529579	n:2530000
KS ci ratio: 1.481618e+00	ci left: 8.703144e-07	ci right 5.161840e-06	k: 6	n:2530000
ZNF845   2530000 perm   2907 sec   (870 perm/sec)   p_kst 2.371542e-06   p_cons 9.998336e-01   p_joint 4.150198e-05

Joint ci ratio: 3.807360e-01	ci left: 3.381099e-05	ci right 5.004266e-05	k: 105	n:2540000
Cons ci ratio: 3.185614e-05	ci left: 9.998160e-01	ci right 9.998482e-01	k: 2539575	n:2540000
KS ci ratio: 1.481618e+00	ci left: 8.668880e-07	ci right 5.141518e-06	k: 6	n:2540000
ZNF845   2540000 perm   2928 sec   (867 perm/sec)   p_kst 2.362205e-06   p_cons 9.998327e-01   p_joint 4.133858e-05

Joint ci ratio: 3.754598e-01	ci left: 3.474306e-05	ci right 5.113417e-05	k: 108	n:2550000
Cons ci ratio: 3.173120e-05	ci left: 9.998167e-01	ci right 9.998488e-01	k: 2549575	n:2550000
KS ci ratio: 1.385927e+00	ci left: 1.103672e-06	ci right 5.655943e-06	k: 7	n:2550000
ZNF845   2550000 perm   2949 sec   (865 perm/sec)   p_kst 2.745098e-06   p_cons 9.998333e-01   p_joint 4.235294e-05

Joint ci ratio: 3.754598e-01	ci left: 3.460735e-05	ci right 5.093443e-05	k: 108	n:2560000
Cons ci ratio: 3.164433e-05	ci left: 9.998170e-01	ci right 9.998490e-01	k: 2559574	n:2560000
KS ci ratio: 1.385927e+00	ci left: 1.099361e-06	ci right 5.633849e-06	k: 7	n:2560000
ZNF845   2560000 perm   2970 sec   (862 perm/sec)   p_kst 2.734375e-06   p_cons 9.998336e-01   p_joint 4.218750e-05

Joint ci ratio: 3.720618e-01	ci left: 3.517780e-05	ci right 5.158722e-05	k: 110	n:2570000
Cons ci ratio: 3.155808e-05	ci left: 9.998173e-01	ci right 9.998492e-01	k: 2569573	n:2570000
KS ci ratio: 1.385927e+00	ci left: 1.095084e-06	ci right 5.611928e-06	k: 7	n:2570000
ZNF845   2570000 perm   2993 sec   (859 perm/sec)   p_kst 2.723735e-06   p_cons 9.998339e-01   p_joint 4.280156e-05

Joint ci ratio: 3.703971e-01	ci left: 3.539289e-05	ci right 5.181087e-05	k: 111	n:2580000
Cons ci ratio: 3.147246e-05	ci left: 9.998176e-01	ci right 9.998495e-01	k: 2579572	n:2580000
KS ci ratio: 1.385927e+00	ci left: 1.090839e-06	ci right 5.590176e-06	k: 7	n:2580000
ZNF845   2580000 perm   3014 sec   (856 perm/sec)   p_kst 2.713178e-06   p_cons 9.998341e-01   p_joint 4.302326e-05

Joint ci ratio: 3.703971e-01	ci left: 3.525624e-05	ci right 5.161083e-05	k: 111	n:2590000
Cons ci ratio: 3.138746e-05	ci left: 9.998179e-01	ci right 9.998497e-01	k: 2589571	n:2590000
KS ci ratio: 1.385927e+00	ci left: 1.086627e-06	ci right 5.568593e-06	k: 7	n:2590000
ZNF845   2590000 perm   3035 sec   (853 perm/sec)   p_kst 2.702703e-06   p_cons 9.998344e-01   p_joint 4.285714e-05

Joint ci ratio: 3.703971e-01	ci left: 3.512064e-05	ci right 5.141233e-05	k: 111	n:2600000
Cons ci ratio: 3.137563e-05	ci left: 9.998174e-01	ci right 9.998491e-01	k: 2599568	n:2600000
KS ci ratio: 1.385927e+00	ci left: 1.082448e-06	ci right 5.547175e-06	k: 7	n:2600000
ZNF845   2600000 perm   3056 sec   (851 perm/sec)   p_kst 2.692308e-06   p_cons 9.998338e-01   p_joint 4.269231e-05

Joint ci ratio: 3.703972e-01	ci left: 3.498607e-05	ci right 5.121535e-05	k: 111	n:2610000
Cons ci ratio: 3.129148e-05	ci left: 9.998177e-01	ci right 9.998494e-01	k: 2609567	n:2610000
KS ci ratio: 1.385927e+00	ci left: 1.078301e-06	ci right 5.525921e-06	k: 7	n:2610000
ZNF845   2610000 perm   3078 sec   (848 perm/sec)   p_kst 2.681992e-06   p_cons 9.998341e-01   p_joint 4.252874e-05

Joint ci ratio: 3.703972e-01	ci left: 3.485254e-05	ci right 5.101987e-05	k: 111	n:2620000
Cons ci ratio: 3.120794e-05	ci left: 9.998180e-01	ci right 9.998496e-01	k: 2619566	n:2620000
KS ci ratio: 1.385927e+00	ci left: 1.074185e-06	ci right 5.504830e-06	k: 7	n:2620000
ZNF845   2620000 perm   3099 sec   (845 perm/sec)   p_kst 2.671756e-06   p_cons 9.998344e-01   p_joint 4.236641e-05

Joint ci ratio: 3.703972e-01	ci left: 3.472002e-05	ci right 5.082588e-05	k: 111	n:2630000
Cons ci ratio: 3.112499e-05	ci left: 9.998183e-01	ci right 9.998498e-01	k: 2629565	n:2630000
KS ci ratio: 1.385927e+00	ci left: 1.070101e-06	ci right 5.483899e-06	k: 7	n:2630000
ZNF845   2630000 perm   3120 sec   (843 perm/sec)   p_kst 2.661597e-06   p_cons 9.998346e-01   p_joint 4.220532e-05

Joint ci ratio: 3.703973e-01	ci left: 3.458850e-05	ci right 5.063336e-05	k: 111	n:2640000
Cons ci ratio: 3.107813e-05	ci left: 9.998182e-01	ci right 9.998496e-01	k: 2639563	n:2640000
KS ci ratio: 1.385927e+00	ci left: 1.066047e-06	ci right 5.463127e-06	k: 7	n:2640000
ZNF845   2640000 perm   3142 sec   (840 perm/sec)   p_kst 2.651515e-06   p_cons 9.998345e-01   p_joint 4.204545e-05

Joint ci ratio: 3.703973e-01	ci left: 3.445798e-05	ci right 5.044229e-05	k: 111	n:2650000
Cons ci ratio: 3.103146e-05	ci left: 9.998181e-01	ci right 9.998495e-01	k: 2649561	n:2650000
KS ci ratio: 1.385927e+00	ci left: 1.062024e-06	ci right 5.442511e-06	k: 7	n:2650000
ZNF845   2650000 perm   3163 sec   (838 perm/sec)   p_kst 2.641509e-06   p_cons 9.998343e-01   p_joint 4.188679e-05

Joint ci ratio: 3.703973e-01	ci left: 3.432844e-05	ci right 5.025266e-05	k: 111	n:2660000
Cons ci ratio: 3.094991e-05	ci left: 9.998184e-01	ci right 9.998497e-01	k: 2659560	n:2660000
KS ci ratio: 1.385927e+00	ci left: 1.058032e-06	ci right 5.422051e-06	k: 7	n:2660000
ZNF845   2660000 perm   3186 sec   (835 perm/sec)   p_kst 2.631579e-06   p_cons 9.998346e-01   p_joint 4.172932e-05

Joint ci ratio: 3.703973e-01	ci left: 3.419987e-05	ci right 5.006444e-05	k: 111	n:2670000
Cons ci ratio: 3.090383e-05	ci left: 9.998183e-01	ci right 9.998495e-01	k: 2669558	n:2670000
KS ci ratio: 1.385927e+00	ci left: 1.054069e-06	ci right 5.401744e-06	k: 7	n:2670000
ZNF845   2670000 perm   3207 sec   (832 perm/sec)   p_kst 2.621723e-06   p_cons 9.998345e-01   p_joint 4.157303e-05

Joint ci ratio: 3.703974e-01	ci left: 3.407226e-05	ci right 4.987764e-05	k: 111	n:2680000
Cons ci ratio: 3.089260e-05	ci left: 9.998178e-01	ci right 9.998490e-01	k: 2679555	n:2680000
KS ci ratio: 1.385927e+00	ci left: 1.050136e-06	ci right 5.381588e-06	k: 7	n:2680000
ZNF845   2680000 perm   3229 sec   (830 perm/sec)   p_kst 2.611940e-06   p_cons 9.998340e-01   p_joint 4.141791e-05

Joint ci ratio: 3.703974e-01	ci left: 3.394559e-05	ci right 4.969222e-05	k: 111	n:2690000
Cons ci ratio: 3.077775e-05	ci left: 9.998185e-01	ci right 9.998496e-01	k: 2689555	n:2690000
KS ci ratio: 1.385927e+00	ci left: 1.046232e-06	ci right 5.361582e-06	k: 7	n:2690000
ZNF845   2690000 perm   3250 sec   (828 perm/sec)   p_kst 2.602230e-06   p_cons 9.998346e-01   p_joint 4.126394e-05

Joint ci ratio: 3.703974e-01	ci left: 3.381987e-05	ci right 4.950817e-05	k: 111	n:2700000
Cons ci ratio: 3.073243e-05	ci left: 9.998184e-01	ci right 9.998494e-01	k: 2699553	n:2700000
KS ci ratio: 1.385927e+00	ci left: 1.042357e-06	ci right 5.341724e-06	k: 7	n:2700000
ZNF845   2700000 perm   3272 sec   (825 perm/sec)   p_kst 2.592593e-06   p_cons 9.998344e-01   p_joint 4.111111e-05

Joint ci ratio: 3.687548e-01	ci left: 3.402981e-05	ci right 4.972861e-05	k: 112	n:2710000
Cons ci ratio: 3.068730e-05	ci left: 9.998183e-01	ci right 9.998493e-01	k: 2709551	n:2710000
KS ci ratio: 1.385927e+00	ci left: 1.038511e-06	ci right 5.322013e-06	k: 7	n:2710000
ZNF845   2710000 perm   3295 sec   (822 perm/sec)   p_kst 2.583026e-06   p_cons 9.998343e-01   p_joint 4.132841e-05

Joint ci ratio: 3.687549e-01	ci left: 3.390470e-05	ci right 4.954579e-05	k: 112	n:2720000
Cons ci ratio: 3.067623e-05	ci left: 9.998178e-01	ci right 9.998488e-01	k: 2719548	n:2720000
KS ci ratio: 1.385927e+00	ci left: 1.034693e-06	ci right 5.302447e-06	k: 7	n:2720000
ZNF845   2720000 perm   3317 sec   (820 perm/sec)   p_kst 2.573529e-06   p_cons 9.998338e-01   p_joint 4.117647e-05

Joint ci ratio: 3.671339e-01	ci left: 3.411294e-05	ci right 4.976432e-05	k: 113	n:2730000
Cons ci ratio: 3.059758e-05	ci left: 9.998181e-01	ci right 9.998490e-01	k: 2729547	n:2730000
KS ci ratio: 1.385927e+00	ci left: 1.030903e-06	ci right 5.283024e-06	k: 7	n:2730000
ZNF845   2730000 perm   3339 sec   (818 perm/sec)   p_kst 2.564103e-06   p_cons 9.998341e-01   p_joint 4.139194e-05

Joint ci ratio: 3.720623e-01	ci left: 3.299523e-05	ci right 4.838657e-05	k: 110	n:2740000
Cons ci ratio: 3.048590e-05	ci left: 9.998187e-01	ci right 9.998495e-01	k: 2739547	n:2740000
KS ci ratio: 1.385927e+00	ci left: 1.027140e-06	ci right 5.263743e-06	k: 7	n:2740000
ZNF845   2740000 perm   3362 sec   (815 perm/sec)   p_kst 2.554745e-06   p_cons 9.998347e-01   p_joint 4.014599e-05

Joint ci ratio: 3.720624e-01	ci left: 3.287525e-05	ci right 4.821062e-05	k: 110	n:2750000
Cons ci ratio: 3.050857e-05	ci left: 9.998179e-01	ci right 9.998487e-01	k: 2749543	n:2750000
KS ci ratio: 1.385927e+00	ci left: 1.023405e-06	ci right 5.244602e-06	k: 7	n:2750000
ZNF845   2750000 perm   3384 sec   (813 perm/sec)   p_kst 2.545455e-06   p_cons 9.998338e-01   p_joint 4.000000e-05

Joint ci ratio: 3.703976e-01	ci left: 3.308465e-05	ci right 4.843191e-05	k: 111	n:2760000
Cons ci ratio: 3.039802e-05	ci left: 9.998185e-01	ci right 9.998493e-01	k: 2759543	n:2760000
KS ci ratio: 1.385927e+00	ci left: 1.019697e-06	ci right 5.225600e-06	k: 7	n:2760000
ZNF845   2760000 perm   3408 sec   (810 perm/sec)   p_kst 2.536232e-06   p_cons 9.998344e-01   p_joint 4.021739e-05

Joint ci ratio: 3.807367e-01	ci left: 3.100357e-05	ci right 4.588751e-05	k: 105	n:2770000
Cons ci ratio: 3.038733e-05	ci left: 9.998180e-01	ci right 9.998488e-01	k: 2769540	n:2770000
KS ci ratio: 1.385927e+00	ci left: 1.016016e-06	ci right 5.206735e-06	k: 7	n:2770000
ZNF845   2770000 perm   3432 sec   (807 perm/sec)   p_kst 2.527076e-06   p_cons 9.998339e-01   p_joint 3.790614e-05

Joint ci ratio: 3.807367e-01	ci left: 3.089204e-05	ci right 4.572244e-05	k: 105	n:2780000
Cons ci ratio: 3.037639e-05	ci left: 9.998176e-01	ci right 9.998483e-01	k: 2779537	n:2780000
KS ci ratio: 1.385927e+00	ci left: 1.012361e-06	ci right 5.188006e-06	k: 7	n:2780000
ZNF845   2780000 perm   3454 sec   (805 perm/sec)   p_kst 2.517986e-06   p_cons 9.998335e-01   p_joint 3.776978e-05

Joint ci ratio: 3.807368e-01	ci left: 3.078132e-05	ci right 4.555857e-05	k: 105	n:2790000
Cons ci ratio: 3.030011e-05	ci left: 9.998178e-01	ci right 9.998485e-01	k: 2789536	n:2790000
KS ci ratio: 1.385927e+00	ci left: 1.008733e-06	ci right 5.169411e-06	k: 7	n:2790000
ZNF845   2790000 perm   3477 sec   (802 perm/sec)   p_kst 2.508961e-06   p_cons 9.998337e-01   p_joint 3.763441e-05

Joint ci ratio: 3.789534e-01	ci left: 3.099443e-05	ci right 4.578694e-05	k: 106	n:2800000
Cons ci ratio: 3.022433e-05	ci left: 9.998181e-01	ci right 9.998487e-01	k: 2799535	n:2800000
KS ci ratio: 1.385927e+00	ci left: 1.005130e-06	ci right 5.150949e-06	k: 7	n:2800000
ZNF845   2800000 perm   3500 sec   (800 perm/sec)   p_kst 2.500000e-06   p_cons 9.998339e-01   p_joint 3.785714e-05

Joint ci ratio: 3.789534e-01	ci left: 3.088413e-05	ci right 4.562400e-05	k: 106	n:2810000
Cons ci ratio: 3.024577e-05	ci left: 9.998173e-01	ci right 9.998479e-01	k: 2809531	n:2810000
KS ci ratio: 1.385927e+00	ci left: 1.001553e-06	ci right 5.132618e-06	k: 7	n:2810000
ZNF845   2810000 perm   3523 sec   (798 perm/sec)   p_kst 2.491103e-06   p_cons 9.998331e-01   p_joint 3.772242e-05

Joint ci ratio: 4.155125e-01	ci left: 2.502794e-05	ci right 3.844612e-05	k: 88	n:2820000
Cons ci ratio: 3.020257e-05	ci left: 9.998172e-01	ci right 9.998477e-01	k: 2819529	n:2820000
KS ci ratio: 1.385927e+00	ci left: 9.980016e-07	ci right 5.114417e-06	k: 7	n:2820000
ZNF845   2820000 perm   3545 sec   (795 perm/sec)   p_kst 2.482270e-06   p_cons 9.998330e-01   p_joint 3.120567e-05

Joint ci ratio: 4.155126e-01	ci left: 2.493950e-05	ci right 3.831027e-05	k: 88	n:2830000
Cons ci ratio: 3.015955e-05	ci left: 9.998171e-01	ci right 9.998476e-01	k: 2829527	n:2830000
KS ci ratio: 1.385927e+00	ci left: 9.944751e-07	ci right 5.096345e-06	k: 7	n:2830000
ZNF845   2830000 perm   3568 sec   (793 perm/sec)   p_kst 2.473498e-06   p_cons 9.998329e-01   p_joint 3.109541e-05

Joint ci ratio: 4.155126e-01	ci left: 2.485168e-05	ci right 3.817538e-05	k: 88	n:2840000
Cons ci ratio: 3.011669e-05	ci left: 9.998170e-01	ci right 9.998475e-01	k: 2839525	n:2840000
KS ci ratio: 1.385927e+00	ci left: 9.909735e-07	ci right 5.078400e-06	k: 7	n:2840000
ZNF845   2840000 perm   3592 sec   (791 perm/sec)   p_kst 2.464789e-06   p_cons 9.998327e-01   p_joint 3.098592e-05

Joint ci ratio: 4.131977e-01	ci left: 2.507878e-05	ci right 3.842869e-05	k: 89	n:2850000
Cons ci ratio: 3.007400e-05	ci left: 9.998169e-01	ci right 9.998473e-01	k: 2849523	n:2850000
KS ci ratio: 1.385927e+00	ci left: 9.874964e-07	ci right 5.060581e-06	k: 7	n:2850000
ZNF845   2850000 perm   3615 sec   (788 perm/sec)   p_kst 2.456140e-06   p_cons 9.998326e-01   p_joint 3.122807e-05

Joint ci ratio: 4.131977e-01	ci left: 2.499109e-05	ci right 3.829432e-05	k: 89	n:2860000
Cons ci ratio: 3.000017e-05	ci left: 9.998172e-01	ci right 9.998475e-01	k: 2859522	n:2860000
KS ci ratio: 1.385927e+00	ci left: 9.840436e-07	ci right 5.042887e-06	k: 7	n:2860000
ZNF845   2860000 perm   3638 sec   (786 perm/sec)   p_kst 2.447552e-06   p_cons 9.998329e-01   p_joint 3.111888e-05

Joint ci ratio: 4.109211e-01	ci left: 2.521632e-05	ci right 3.854526e-05	k: 90	n:2870000
Cons ci ratio: 2.992683e-05	ci left: 9.998175e-01	ci right 9.998477e-01	k: 2869521	n:2870000
KS ci ratio: 1.385927e+00	ci left: 9.806148e-07	ci right 5.025316e-06	k: 7	n:2870000
ZNF845   2870000 perm   3662 sec   (784 perm/sec)   p_kst 2.439024e-06   p_cons 9.998331e-01   p_joint 3.135889e-05

Joint ci ratio: 4.109211e-01	ci left: 2.512876e-05	ci right 3.841142e-05	k: 90	n:2880000
Cons ci ratio: 2.988499e-05	ci left: 9.998174e-01	ci right 9.998476e-01	k: 2879519	n:2880000
KS ci ratio: 1.385927e+00	ci left: 9.772099e-07	ci right 5.007867e-06	k: 7	n:2880000
ZNF845   2880000 perm   3685 sec   (782 perm/sec)   p_kst 2.430556e-06   p_cons 9.998330e-01   p_joint 3.125000e-05

Joint ci ratio: 4.109211e-01	ci left: 2.504181e-05	ci right 3.827851e-05	k: 90	n:2890000
Cons ci ratio: 2.981245e-05	ci left: 9.998176e-01	ci right 9.998478e-01	k: 2889518	n:2890000
KS ci ratio: 1.385927e+00	ci left: 9.738286e-07	ci right 4.990539e-06	k: 7	n:2890000
ZNF845   2890000 perm   3708 sec   (779 perm/sec)   p_kst 2.422145e-06   p_cons 9.998332e-01   p_joint 3.114187e-05

Joint ci ratio: 4.086817e-01	ci left: 2.526474e-05	ci right 3.852670e-05	k: 91	n:2900000
Cons ci ratio: 2.977110e-05	ci left: 9.998176e-01	ci right 9.998476e-01	k: 2899516	n:2900000
KS ci ratio: 1.385927e+00	ci left: 9.704706e-07	ci right 4.973330e-06	k: 7	n:2900000
ZNF845   2900000 perm   3732 sec   (777 perm/sec)   p_kst 2.413793e-06   p_cons 9.998331e-01   p_joint 3.137931e-05

Joint ci ratio: 4.043105e-01	ci left: 2.579492e-05	ci right 3.915150e-05	k: 93	n:2910000
Cons ci ratio: 2.966879e-05	ci left: 9.998182e-01	ci right 9.998482e-01	k: 2909516	n:2910000
KS ci ratio: 1.385927e+00	ci left: 9.671356e-07	ci right 4.956240e-06	k: 7	n:2910000
ZNF845   2910000 perm   3756 sec   (775 perm/sec)   p_kst 2.405498e-06   p_cons 9.998337e-01   p_joint 3.195876e-05

Joint ci ratio: 4.043106e-01	ci left: 2.570658e-05	ci right 3.901742e-05	k: 93	n:2920000
Cons ci ratio: 2.962808e-05	ci left: 9.998181e-01	ci right 9.998480e-01	k: 2919514	n:2920000
KS ci ratio: 1.385927e+00	ci left: 9.638235e-07	ci right 4.939266e-06	k: 7	n:2920000
ZNF845   2920000 perm   3779 sec   (773 perm/sec)   p_kst 2.397260e-06   p_cons 9.998336e-01   p_joint 3.184932e-05

Joint ci ratio: 4.043106e-01	ci left: 2.561885e-05	ci right 3.888426e-05	k: 93	n:2930000
Cons ci ratio: 2.967817e-05	ci left: 9.998169e-01	ci right 9.998469e-01	k: 2929509	n:2930000
KS ci ratio: 1.385927e+00	ci left: 9.605340e-07	ci right 4.922409e-06	k: 7	n:2930000
ZNF845   2930000 perm   3803 sec   (771 perm/sec)   p_kst 2.389078e-06   p_cons 9.998324e-01   p_joint 3.174061e-05

Joint ci ratio: 4.043106e-01	ci left: 2.553171e-05	ci right 3.875200e-05	k: 93	n:2940000
Cons ci ratio: 2.963728e-05	ci left: 9.998168e-01	ci right 9.998468e-01	k: 2939507	n:2940000
KS ci ratio: 1.385927e+00	ci left: 9.572669e-07	ci right 4.905666e-06	k: 7	n:2940000
ZNF845   2940000 perm   3827 sec   (768 perm/sec)   p_kst 2.380952e-06   p_cons 9.998323e-01   p_joint 3.163265e-05

Joint ci ratio: 4.043106e-01	ci left: 2.544516e-05	ci right 3.862064e-05	k: 93	n:2950000
Cons ci ratio: 2.962637e-05	ci left: 9.998164e-01	ci right 9.998463e-01	k: 2949504	n:2950000
KS ci ratio: 1.385927e+00	ci left: 9.540219e-07	ci right 4.889036e-06	k: 7	n:2950000
ZNF845   2950000 perm   3851 sec   (766 perm/sec)   p_kst 2.372881e-06   p_cons 9.998319e-01   p_joint 3.152542e-05

Joint ci ratio: 4.043106e-01	ci left: 2.535920e-05	ci right 3.849016e-05	k: 93	n:2960000
Cons ci ratio: 2.952627e-05	ci left: 9.998170e-01	ci right 9.998469e-01	k: 2959504	n:2960000
KS ci ratio: 1.385927e+00	ci left: 9.507988e-07	ci right 4.872519e-06	k: 7	n:2960000
ZNF845   2960000 perm   3874 sec   (764 perm/sec)   p_kst 2.364865e-06   p_cons 9.998324e-01   p_joint 3.141892e-05

Joint ci ratio: 4.043107e-01	ci left: 2.527381e-05	ci right 3.836057e-05	k: 93	n:2970000
Cons ci ratio: 2.948601e-05	ci left: 9.998169e-01	ci right 9.998467e-01	k: 2969502	n:2970000
KS ci ratio: 1.385927e+00	ci left: 9.475975e-07	ci right 4.856114e-06	k: 7	n:2970000
ZNF845   2970000 perm   3899 sec   (762 perm/sec)   p_kst 2.356902e-06   p_cons 9.998323e-01   p_joint 3.131313e-05

Joint ci ratio: 4.043107e-01	ci left: 2.518900e-05	ci right 3.823184e-05	k: 93	n:2980000
Cons ci ratio: 2.944590e-05	ci left: 9.998168e-01	ci right 9.998466e-01	k: 2979500	n:2980000
KS ci ratio: 1.385927e+00	ci left: 9.444176e-07	ci right 4.839818e-06	k: 7	n:2980000
ZNF845   2980000 perm   3924 sec   (759 perm/sec)   p_kst 2.348993e-06   p_cons 9.998322e-01   p_joint 3.120805e-05

Joint ci ratio: 4.021771e-01	ci left: 2.540528e-05	ci right 3.847217e-05	k: 94	n:2990000
Cons ci ratio: 2.934741e-05	ci left: 9.998175e-01	ci right 9.998471e-01	k: 2989500	n:2990000
KS ci ratio: 1.385927e+00	ci left: 9.412590e-07	ci right 4.823631e-06	k: 7	n:2990000
ZNF845   2990000 perm   3948 sec   (757 perm/sec)   p_kst 2.341137e-06   p_cons 9.998328e-01   p_joint 3.143813e-05

Joint ci ratio: 4.021771e-01	ci left: 2.532059e-05	ci right 3.834393e-05	k: 94	n:3000000
Cons ci ratio: 2.927876e-05	ci left: 9.998177e-01	ci right 9.998473e-01	k: 2999499	n:3000000
KS ci ratio: 1.385927e+00	ci left: 9.381215e-07	ci right 4.807553e-06	k: 7	n:3000000
ZNF845   3000000 perm   3973 sec   (755 perm/sec)   p_kst 2.333333e-06   p_cons 9.998330e-01   p_joint 3.133333e-05

Joint ci ratio: 4.021771e-01	ci left: 2.523647e-05	ci right 3.821654e-05	k: 94	n:3010000
Cons ci ratio: 2.918148e-05	ci left: 9.998183e-01	ci right 9.998478e-01	k: 3009499	n:3010000
KS ci ratio: 1.385927e+00	ci left: 9.350048e-07	ci right 4.791581e-06	k: 7	n:3010000
ZNF845   3010000 perm   3997 sec   (753 perm/sec)   p_kst 2.325581e-06   p_cons 9.998336e-01   p_joint 3.122924e-05

Joint ci ratio: 3.980092e-01	ci left: 2.574852e-05	ci right 3.881855e-05	k: 96	n:3020000
Cons ci ratio: 2.914273e-05	ci left: 9.998182e-01	ci right 9.998477e-01	k: 3019497	n:3020000
KS ci ratio: 1.385927e+00	ci left: 9.319088e-07	ci right 4.775714e-06	k: 7	n:3020000
ZNF845   3020000 perm   4022 sec   (751 perm/sec)   p_kst 2.317881e-06   p_cons 9.998334e-01   p_joint 3.178808e-05

Joint ci ratio: 3.980093e-01	ci left: 2.566354e-05	ci right 3.869044e-05	k: 96	n:3030000
Cons ci ratio: 2.910413e-05	ci left: 9.998181e-01	ci right 9.998476e-01	k: 3029495	n:3030000
KS ci ratio: 1.385927e+00	ci left: 9.288332e-07	ci right 4.759953e-06	k: 7	n:3030000
ZNF845   3030000 perm   4047 sec   (749 perm/sec)   p_kst 2.310231e-06   p_cons 9.998333e-01   p_joint 3.168317e-05

Joint ci ratio: 3.980093e-01	ci left: 2.557912e-05	ci right 3.856317e-05	k: 96	n:3040000
Cons ci ratio: 2.906567e-05	ci left: 9.998181e-01	ci right 9.998474e-01	k: 3039493	n:3040000
KS ci ratio: 1.385927e+00	ci left: 9.257778e-07	ci right 4.744295e-06	k: 7	n:3040000
ZNF845   3040000 perm   4071 sec   (747 perm/sec)   p_kst 2.302632e-06   p_cons 9.998332e-01   p_joint 3.157895e-05

Joint ci ratio: 3.980093e-01	ci left: 2.549526e-05	ci right 3.843673e-05	k: 96	n:3050000
Cons ci ratio: 2.899887e-05	ci left: 9.998183e-01	ci right 9.998476e-01	k: 3049492	n:3050000
KS ci ratio: 1.385927e+00	ci left: 9.227425e-07	ci right 4.728740e-06	k: 7	n:3050000
ZNF845   3050000 perm   4096 sec   (745 perm/sec)   p_kst 2.295082e-06   p_cons 9.998334e-01   p_joint 3.147541e-05

Joint ci ratio: 3.959734e-01	ci left: 2.570611e-05	ci right 3.867038e-05	k: 97	n:3060000
Cons ci ratio: 2.896083e-05	ci left: 9.998182e-01	ci right 9.998475e-01	k: 3059490	n:3060000
KS ci ratio: 1.385927e+00	ci left: 9.197270e-07	ci right 4.713287e-06	k: 7	n:3060000
ZNF845   3060000 perm   4121 sec   (742 perm/sec)   p_kst 2.287582e-06   p_cons 9.998333e-01   p_joint 3.169935e-05

Joint ci ratio: 3.959734e-01	ci left: 2.562237e-05	ci right 3.854442e-05	k: 97	n:3070000
Cons ci ratio: 2.886649e-05	ci left: 9.998188e-01	ci right 9.998480e-01	k: 3069490	n:3070000
KS ci ratio: 1.385927e+00	ci left: 9.167311e-07	ci right 4.697934e-06	k: 7	n:3070000
ZNF845   3070000 perm   4146 sec   (740 perm/sec)   p_kst 2.280130e-06   p_cons 9.998339e-01   p_joint 3.159609e-05

Joint ci ratio: 3.959734e-01	ci left: 2.553918e-05	ci right 3.841927e-05	k: 97	n:3080000
Cons ci ratio: 2.882902e-05	ci left: 9.998187e-01	ci right 9.998479e-01	k: 3079488	n:3080000
KS ci ratio: 1.385927e+00	ci left: 9.137547e-07	ci right 4.682681e-06	k: 7	n:3080000
ZNF845   3080000 perm   4172 sec   (738 perm/sec)   p_kst 2.272727e-06   p_cons 9.998338e-01   p_joint 3.149351e-05

Joint ci ratio: 3.959735e-01	ci left: 2.545653e-05	ci right 3.829494e-05	k: 97	n:3090000
Cons ci ratio: 2.876371e-05	ci left: 9.998190e-01	ci right 9.998480e-01	k: 3089487	n:3090000
KS ci ratio: 1.385927e+00	ci left: 9.107976e-07	ci right 4.667527e-06	k: 7	n:3090000
ZNF845   3090000 perm   4197 sec   (736 perm/sec)   p_kst 2.265372e-06   p_cons 9.998340e-01   p_joint 3.139159e-05

Joint ci ratio: 3.959735e-01	ci left: 2.537441e-05	ci right 3.817141e-05	k: 97	n:3100000
Cons ci ratio: 2.878228e-05	ci left: 9.998182e-01	ci right 9.998473e-01	k: 3099483	n:3100000
KS ci ratio: 1.385927e+00	ci left: 9.078595e-07	ci right 4.652470e-06	k: 7	n:3100000
ZNF845   3100000 perm   4222 sec   (734 perm/sec)   p_kst 2.258065e-06   p_cons 9.998332e-01   p_joint 3.129032e-05

Joint ci ratio: 4.000771e-01	ci left: 2.471411e-05	ci right 3.734154e-05	k: 95	n:3110000
Cons ci ratio: 2.868972e-05	ci left: 9.998188e-01	ci right 9.998478e-01	k: 3109483	n:3110000
KS ci ratio: 1.385927e+00	ci left: 9.049404e-07	ci right 4.637511e-06	k: 7	n:3110000
ZNF845   3110000 perm   4248 sec   (732 perm/sec)   p_kst 2.250804e-06   p_cons 9.998338e-01   p_joint 3.054662e-05

Joint ci ratio: 4.000771e-01	ci left: 2.463490e-05	ci right 3.722185e-05	k: 95	n:3120000
Cons ci ratio: 2.862536e-05	ci left: 9.998190e-01	ci right 9.998480e-01	k: 3119482	n:3120000
KS ci ratio: 1.385927e+00	ci left: 9.020399e-07	ci right 4.622647e-06	k: 7	n:3120000
ZNF845   3120000 perm   4272 sec   (730 perm/sec)   p_kst 2.243590e-06   p_cons 9.998340e-01   p_joint 3.044872e-05

Joint ci ratio: 4.000771e-01	ci left: 2.455619e-05	ci right 3.710293e-05	k: 95	n:3130000
Cons ci ratio: 2.853390e-05	ci left: 9.998196e-01	ci right 9.998485e-01	k: 3129482	n:3130000
KS ci ratio: 1.385927e+00	ci left: 8.991580e-07	ci right 4.607878e-06	k: 7	n:3130000
ZNF845   3130000 perm   4297 sec   (728 perm/sec)   p_kst 2.236422e-06   p_cons 9.998345e-01   p_joint 3.035144e-05

Joint ci ratio: 3.980095e-01	ci left: 2.476450e-05	ci right 3.733504e-05	k: 96	n:3140000
Cons ci ratio: 2.847041e-05	ci left: 9.998199e-01	ci right 9.998486e-01	k: 3139481	n:3140000
KS ci ratio: 1.385927e+00	ci left: 8.962944e-07	ci right 4.593203e-06	k: 7	n:3140000
ZNF845   3140000 perm   4323 sec   (726 perm/sec)   p_kst 2.229299e-06   p_cons 9.998347e-01   p_joint 3.057325e-05

Joint ci ratio: 3.980095e-01	ci left: 2.468588e-05	ci right 3.721652e-05	k: 96	n:3150000
Cons ci ratio: 2.846178e-05	ci left: 9.998194e-01	ci right 9.998482e-01	k: 3149478	n:3150000
KS ci ratio: 1.385927e+00	ci left: 8.934490e-07	ci right 4.578622e-06	k: 7	n:3150000
ZNF845   3150000 perm   4348 sec   (724 perm/sec)   p_kst 2.222222e-06   p_cons 9.998343e-01   p_joint 3.047619e-05

Joint ci ratio: 3.980095e-01	ci left: 2.460776e-05	ci right 3.709875e-05	k: 96	n:3160000
Cons ci ratio: 2.839882e-05	ci left: 9.998197e-01	ci right 9.998484e-01	k: 3159477	n:3160000
KS ci ratio: 1.385927e+00	ci left: 8.906217e-07	ci right 4.564132e-06	k: 7	n:3160000
ZNF845   3160000 perm   4374 sec   (723 perm/sec)   p_kst 2.215190e-06   p_cons 9.998345e-01   p_joint 3.037975e-05

Joint ci ratio: 3.959736e-01	ci left: 2.481409e-05	ci right 3.732851e-05	k: 97	n:3170000
Cons ci ratio: 2.833623e-05	ci left: 9.998199e-01	ci right 9.998486e-01	k: 3169476	n:3170000
KS ci ratio: 1.385927e+00	ci left: 8.878121e-07	ci right 4.549735e-06	k: 7	n:3170000
ZNF845   3170000 perm   4398 sec   (721 perm/sec)   p_kst 2.208202e-06   p_cons 9.998347e-01   p_joint 3.059937e-05

Joint ci ratio: 3.959736e-01	ci left: 2.473606e-05	ci right 3.721112e-05	k: 97	n:3180000
Cons ci ratio: 2.824712e-05	ci left: 9.998205e-01	ci right 9.998490e-01	k: 3179476	n:3180000
KS ci ratio: 1.385927e+00	ci left: 8.850203e-07	ci right 4.535427e-06	k: 7	n:3180000
ZNF845   3180000 perm   4424 sec   (719 perm/sec)   p_kst 2.201258e-06   p_cons 9.998352e-01   p_joint 3.050314e-05

Joint ci ratio: 3.959737e-01	ci left: 2.465852e-05	ci right 3.709448e-05	k: 97	n:3190000
Cons ci ratio: 2.815856e-05	ci left: 9.998211e-01	ci right 9.998495e-01	k: 3189476	n:3190000
KS ci ratio: 1.385927e+00	ci left: 8.822459e-07	ci right 4.521210e-06	k: 7	n:3190000
ZNF845   3190000 perm   4449 sec   (717 perm/sec)   p_kst 2.194357e-06   p_cons 9.998357e-01   p_joint 3.040752e-05

Joint ci ratio: 3.959737e-01	ci left: 2.458146e-05	ci right 3.697856e-05	k: 97	n:3200000
Cons ci ratio: 2.807056e-05	ci left: 9.998216e-01	ci right 9.998500e-01	k: 3199476	n:3200000
KS ci ratio: 1.385927e+00	ci left: 8.794889e-07	ci right 4.507081e-06	k: 7	n:3200000
ZNF845   3200000 perm   4475 sec   (715 perm/sec)   p_kst 2.187500e-06   p_cons 9.998362e-01   p_joint 3.031250e-05

Joint ci ratio: 3.959737e-01	ci left: 2.450488e-05	ci right 3.686336e-05	k: 97	n:3210000
Cons ci ratio: 2.803636e-05	ci left: 9.998215e-01	ci right 9.998498e-01	k: 3209474	n:3210000
KS ci ratio: 1.385927e+00	ci left: 8.767490e-07	ci right 4.493040e-06	k: 7	n:3210000
ZNF845   3210000 perm   4501 sec   (713 perm/sec)   p_kst 2.180685e-06   p_cons 9.998361e-01   p_joint 3.021807e-05

Joint ci ratio: 3.959737e-01	ci left: 2.442878e-05	ci right 3.674888e-05	k: 97	n:3220000
Cons ci ratio: 2.797579e-05	ci left: 9.998217e-01	ci right 9.998500e-01	k: 3219473	n:3220000
KS ci ratio: 1.385927e+00	ci left: 8.740262e-07	ci right 4.479087e-06	k: 7	n:3220000
ZNF845   3220000 perm   4527 sec   (711 perm/sec)   p_kst 2.173913e-06   p_cons 9.998363e-01   p_joint 3.012422e-05

Joint ci ratio: 3.959737e-01	ci left: 2.435315e-05	ci right 3.663510e-05	k: 97	n:3230000
Cons ci ratio: 2.802094e-05	ci left: 9.998207e-01	ci right 9.998490e-01	k: 3229468	n:3230000
KS ci ratio: 1.385927e+00	ci left: 8.713203e-07	ci right 4.465219e-06	k: 7	n:3230000
ZNF845   3230000 perm   4552 sec   (710 perm/sec)   p_kst 2.167183e-06   p_cons 9.998353e-01   p_joint 3.003096e-05

Joint ci ratio: 3.959737e-01	ci left: 2.427799e-05	ci right 3.652203e-05	k: 97	n:3240000
Cons ci ratio: 2.796064e-05	ci left: 9.998209e-01	ci right 9.998492e-01	k: 3239467	n:3240000
KS ci ratio: 1.385927e+00	ci left: 8.686310e-07	ci right 4.451438e-06	k: 7	n:3240000
ZNF845   3240000 perm   4578 sec   (708 perm/sec)   p_kst 2.160494e-06   p_cons 9.998355e-01   p_joint 2.993827e-05

Joint ci ratio: 3.959738e-01	ci left: 2.420328e-05	ci right 3.640966e-05	k: 97	n:3250000
Cons ci ratio: 2.790069e-05	ci left: 9.998211e-01	ci right 9.998493e-01	k: 3249466	n:3250000
KS ci ratio: 1.385927e+00	ci left: 8.659583e-07	ci right 4.437741e-06	k: 7	n:3250000
ZNF845   3250000 perm   4603 sec   (706 perm/sec)   p_kst 2.153846e-06   p_cons 9.998357e-01   p_joint 2.984615e-05

Joint ci ratio: 3.959738e-01	ci left: 2.412904e-05	ci right 3.629797e-05	k: 97	n:3260000
Cons ci ratio: 2.786705e-05	ci left: 9.998211e-01	ci right 9.998492e-01	k: 3259464	n:3260000
KS ci ratio: 1.385927e+00	ci left: 8.633020e-07	ci right 4.424129e-06	k: 7	n:3260000
ZNF845   3260000 perm   4630 sec   (704 perm/sec)   p_kst 2.147239e-06   p_cons 9.998356e-01   p_joint 2.975460e-05

Joint ci ratio: 3.959738e-01	ci left: 2.405525e-05	ci right 3.618697e-05	k: 97	n:3270000
Cons ci ratio: 2.778183e-05	ci left: 9.998216e-01	ci right 9.998497e-01	k: 3269464	n:3270000
KS ci ratio: 1.385927e+00	ci left: 8.606619e-07	ci right 4.410599e-06	k: 7	n:3270000
ZNF845   3270000 perm   4656 sec   (702 perm/sec)   p_kst 2.140673e-06   p_cons 9.998361e-01   p_joint 2.966361e-05

Joint ci ratio: 3.959738e-01	ci left: 2.398191e-05	ci right 3.607664e-05	k: 97	n:3280000
Cons ci ratio: 2.780010e-05	ci left: 9.998209e-01	ci right 9.998490e-01	k: 3279460	n:3280000
KS ci ratio: 1.385927e+00	ci left: 8.580379e-07	ci right 4.397152e-06	k: 7	n:3280000
ZNF845   3280000 perm   4682 sec   (701 perm/sec)   p_kst 2.134146e-06   p_cons 9.998354e-01   p_joint 2.957317e-05

Joint ci ratio: 3.959738e-01	ci left: 2.390902e-05	ci right 3.596699e-05	k: 97	n:3290000
Cons ci ratio: 2.779235e-05	ci left: 9.998205e-01	ci right 9.998485e-01	k: 3289457	n:3290000
KS ci ratio: 1.385927e+00	ci left: 8.554299e-07	ci right 4.383787e-06	k: 7	n:3290000
ZNF845   3290000 perm   4709 sec   (699 perm/sec)   p_kst 2.127660e-06   p_cons 9.998350e-01   p_joint 2.948328e-05

Joint ci ratio: 3.959739e-01	ci left: 2.383657e-05	ci right 3.585800e-05	k: 97	n:3300000
Cons ci ratio: 2.773358e-05	ci left: 9.998207e-01	ci right 9.998487e-01	k: 3299456	n:3300000
KS ci ratio: 1.385927e+00	ci left: 8.528377e-07	ci right 4.370503e-06	k: 7	n:3300000
ZNF845   3300000 perm   4735 sec   (697 perm/sec)   p_kst 2.121212e-06   p_cons 9.998352e-01   p_joint 2.939394e-05

Joint ci ratio: 3.959739e-01	ci left: 2.376455e-05	ci right 3.574967e-05	k: 97	n:3310000
Cons ci ratio: 2.767514e-05	ci left: 9.998209e-01	ci right 9.998489e-01	k: 3309455	n:3310000
KS ci ratio: 1.385927e+00	ci left: 8.502612e-07	ci right 4.357299e-06	k: 7	n:3310000
ZNF845   3310000 perm   4761 sec   (695 perm/sec)   p_kst 2.114804e-06   p_cons 9.998353e-01   p_joint 2.930514e-05

Joint ci ratio: 3.939689e-01	ci left: 2.396426e-05	ci right 3.597296e-05	k: 98	n:3320000
Cons ci ratio: 2.764227e-05	ci left: 9.998208e-01	ci right 9.998488e-01	k: 3319453	n:3320000
KS ci ratio: 1.385927e+00	ci left: 8.477001e-07	ci right 4.344174e-06	k: 7	n:3320000
ZNF845   3320000 perm   4788 sec   (693 perm/sec)   p_kst 2.108434e-06   p_cons 9.998352e-01   p_joint 2.951807e-05

Joint ci ratio: 3.919941e-01	ci left: 2.416292e-05	ci right 3.619476e-05	k: 99	n:3330000
Cons ci ratio: 2.760951e-05	ci left: 9.998208e-01	ci right 9.998486e-01	k: 3329451	n:3330000
KS ci ratio: 1.385927e+00	ci left: 8.451545e-07	ci right 4.331129e-06	k: 7	n:3330000
ZNF845   3330000 perm   4815 sec   (692 perm/sec)   p_kst 2.102102e-06   p_cons 9.998351e-01   p_joint 2.972973e-05

Joint ci ratio: 3.900486e-01	ci left: 2.436054e-05	ci right 3.641509e-05	k: 100	n:3340000
Cons ci ratio: 2.752684e-05	ci left: 9.998213e-01	ci right 9.998491e-01	k: 3339451	n:3340000
KS ci ratio: 1.385927e+00	ci left: 8.426241e-07	ci right 4.318161e-06	k: 7	n:3340000
ZNF845   3340000 perm   4841 sec   (690 perm/sec)   p_kst 2.095808e-06   p_cons 9.998356e-01   p_joint 2.994012e-05

Joint ci ratio: 3.900486e-01	ci left: 2.428782e-05	ci right 3.630639e-05	k: 100	n:3350000
Cons ci ratio: 2.751942e-05	ci left: 9.998209e-01	ci right 9.998487e-01	k: 3349448	n:3350000
KS ci ratio: 1.385927e+00	ci left: 8.401088e-07	ci right 4.305271e-06	k: 7	n:3350000
ZNF845   3350000 perm   4869 sec   (688 perm/sec)   p_kst 2.089552e-06   p_cons 9.998352e-01   p_joint 2.985075e-05

Joint ci ratio: 4.021778e-01	ci left: 2.260767e-05	ci right 3.423566e-05	k: 94	n:3360000
Cons ci ratio: 2.748709e-05	ci left: 9.998208e-01	ci right 9.998486e-01	k: 3359446	n:3360000
KS ci ratio: 1.385927e+00	ci left: 8.376084e-07	ci right 4.292458e-06	k: 7	n:3360000
ZNF845   3360000 perm   4896 sec   (686 perm/sec)   p_kst 2.083333e-06   p_cons 9.998351e-01   p_joint 2.797619e-05

Joint ci ratio: 4.021778e-01	ci left: 2.254058e-05	ci right 3.413408e-05	k: 94	n:3370000
Cons ci ratio: 2.745487e-05	ci left: 9.998207e-01	ci right 9.998484e-01	k: 3369444	n:3370000
KS ci ratio: 1.385927e+00	ci left: 8.351230e-07	ci right 4.279721e-06	k: 7	n:3370000
ZNF845   3370000 perm   4924 sec   (684 perm/sec)   p_kst 2.077151e-06   p_cons 9.998350e-01   p_joint 2.789318e-05

Joint ci ratio: 4.000776e-01	ci left: 2.273990e-05	ci right 3.435864e-05	k: 95	n:3380000
Cons ci ratio: 2.739820e-05	ci left: 9.998209e-01	ci right 9.998486e-01	k: 3379443	n:3380000
KS ci ratio: 1.385927e+00	ci left: 8.326522e-07	ci right 4.267059e-06	k: 7	n:3380000
ZNF845   3380000 perm   4951 sec   (683 perm/sec)   p_kst 2.071006e-06   p_cons 9.998352e-01   p_joint 2.810651e-05

Joint ci ratio: 4.064794e-01	ci left: 2.187763e-05	ci right 3.328303e-05	k: 92	n:3390000
Cons ci ratio: 2.734184e-05	ci left: 9.998212e-01	ci right 9.998488e-01	k: 3389442	n:3390000
KS ci ratio: 1.385927e+00	ci left: 8.301960e-07	ci right 4.254472e-06	k: 7	n:3390000
ZNF845   3390000 perm   4979 sec   (681 perm/sec)   p_kst 2.064897e-06   p_cons 9.998354e-01   p_joint 2.713864e-05

Joint ci ratio: 4.064794e-01	ci left: 2.181328e-05	ci right 3.318514e-05	k: 92	n:3400000
Cons ci ratio: 2.731015e-05	ci left: 9.998211e-01	ci right 9.998487e-01	k: 3399440	n:3400000
KS ci ratio: 1.385927e+00	ci left: 8.277542e-07	ci right 4.241959e-06	k: 7	n:3400000
ZNF845   3400000 perm   5006 sec   (679 perm/sec)   p_kst 2.058824e-06   p_cons 9.998353e-01   p_joint 2.705882e-05

Joint ci ratio: 4.064795e-01	ci left: 2.174932e-05	ci right 3.308783e-05	k: 92	n:3410000
Cons ci ratio: 2.732698e-05	ci left: 9.998204e-01	ci right 9.998480e-01	k: 3409436	n:3410000
KS ci ratio: 1.385927e+00	ci left: 8.253268e-07	ci right 4.229519e-06	k: 7	n:3410000
ZNF845   3410000 perm   5035 sec   (677 perm/sec)   p_kst 2.052786e-06   p_cons 9.998346e-01   p_joint 2.697947e-05

Joint ci ratio: 4.064795e-01	ci left: 2.168572e-05	ci right 3.299108e-05	k: 92	n:3420000
Cons ci ratio: 2.724707e-05	ci left: 9.998209e-01	ci right 9.998484e-01	k: 3419436	n:3420000
KS ci ratio: 1.385927e+00	ci left: 8.229136e-07	ci right 4.217152e-06	k: 7	n:3420000
ZNF845   3420000 perm   5063 sec   (675 perm/sec)   p_kst 2.046784e-06   p_cons 9.998351e-01   p_joint 2.690058e-05

Joint ci ratio: 4.064795e-01	ci left: 2.162250e-05	ci right 3.289490e-05	k: 92	n:3430000
Cons ci ratio: 2.723966e-05	ci left: 9.998205e-01	ci right 9.998480e-01	k: 3429433	n:3430000
KS ci ratio: 1.385927e+00	ci left: 8.205144e-07	ci right 4.204857e-06	k: 7	n:3430000
ZNF845   3430000 perm   5090 sec   (674 perm/sec)   p_kst 2.040816e-06   p_cons 9.998347e-01   p_joint 2.682216e-05

Joint ci ratio: 4.064795e-01	ci left: 2.155964e-05	ci right 3.279927e-05	k: 92	n:3440000
Cons ci ratio: 2.718438e-05	ci left: 9.998207e-01	ci right 9.998482e-01	k: 3439432	n:3440000
KS ci ratio: 1.385927e+00	ci left: 8.181292e-07	ci right 4.192634e-06	k: 7	n:3440000
ZNF845   3440000 perm   5117 sec   (672 perm/sec)   p_kst 2.034884e-06   p_cons 9.998349e-01   p_joint 2.674419e-05

Joint ci ratio: 4.064795e-01	ci left: 2.149715e-05	ci right 3.270420e-05	k: 92	n:3450000
Cons ci ratio: 2.715318e-05	ci left: 9.998206e-01	ci right 9.998481e-01	k: 3449430	n:3450000
KS ci ratio: 1.385927e+00	ci left: 8.157578e-07	ci right 4.180481e-06	k: 7	n:3450000
ZNF845   3450000 perm   5145 sec   (671 perm/sec)   p_kst 2.028986e-06   p_cons 9.998348e-01   p_joint 2.666667e-05

Joint ci ratio: 4.064795e-01	ci left: 2.143502e-05	ci right 3.260968e-05	k: 92	n:3460000
Cons ci ratio: 2.712208e-05	ci left: 9.998206e-01	ci right 9.998480e-01	k: 3459428	n:3460000
KS ci ratio: 1.385927e+00	ci left: 8.134001e-07	ci right 4.168399e-06	k: 7	n:3460000
ZNF845   3460000 perm   5172 sec   (669 perm/sec)   p_kst 2.023121e-06   p_cons 9.998347e-01   p_joint 2.658960e-05

Joint ci ratio: 4.043116e-01	ci left: 2.163204e-05	ci right 3.283312e-05	k: 93	n:3470000
Cons ci ratio: 2.706750e-05	ci left: 9.998208e-01	ci right 9.998481e-01	k: 3469427	n:3470000
KS ci ratio: 1.385927e+00	ci left: 8.110560e-07	ci right 4.156386e-06	k: 7	n:3470000
ZNF845   3470000 perm   5200 sec   (667 perm/sec)   p_kst 2.017291e-06   p_cons 9.998349e-01   p_joint 2.680115e-05

Joint ci ratio: 4.899954e-01	ci left: 1.391121e-05	ci right 2.316212e-05	k: 63	n:3480000
Cons ci ratio: 2.708361e-05	ci left: 9.998201e-01	ci right 9.998474e-01	k: 3479423	n:3480000
KS ci ratio: 1.385927e+00	ci left: 8.087254e-07	ci right 4.144443e-06	k: 7	n:3480000
ZNF845   3480000 perm   5228 sec   (666 perm/sec)   p_kst 2.011494e-06   p_cons 9.998342e-01   p_joint 1.810345e-05

Joint ci ratio: 4.899954e-01	ci left: 1.387135e-05	ci right 2.309575e-05	k: 63	n:3490000
Cons ci ratio: 2.702935e-05	ci left: 9.998203e-01	ci right 9.998476e-01	k: 3489422	n:3490000
KS ci ratio: 1.385928e+00	ci left: 8.064081e-07	ci right 4.132567e-06	k: 7	n:3490000
ZNF845   3490000 perm   5256 sec   (664 perm/sec)   p_kst 2.005731e-06   p_cons 9.998344e-01   p_joint 1.805158e-05

Joint ci ratio: 4.862116e-01	ci left: 1.408226e-05	ci right 2.335039e-05	k: 64	n:3500000
Cons ci ratio: 3.059380e-05	ci left: 9.997713e-01	ci right 9.998022e-01	k: 3499255	n:3500000
KS ci ratio: 1.385928e+00	ci left: 8.041041e-07	ci right 4.120760e-06	k: 7	n:3500000
ZNF845   3500000 perm   5283 sec   (663 perm/sec)   p_kst 2.000000e-06   p_cons 9.997871e-01   p_joint 1.828571e-05

Joint ci ratio: 4.862116e-01	ci left: 1.404214e-05	ci right 2.328386e-05	k: 64	n:3510000
Cons ci ratio: 3.064945e-05	ci left: 9.997699e-01	ci right 9.998008e-01	k: 3509248	n:3510000
KS ci ratio: 1.385928e+00	ci left: 8.018132e-07	ci right 4.109020e-06	k: 7	n:3510000
ZNF845   3510000 perm   5310 sec   (661 perm/sec)   p_kst 1.994302e-06   p_cons 9.997858e-01   p_joint 1.823362e-05

Joint ci ratio: 4.862116e-01	ci left: 1.400224e-05	ci right 2.321772e-05	k: 64	n:3520000
Cons ci ratio: 3.058266e-05	ci left: 9.997702e-01	ci right 9.998011e-01	k: 3519247	n:3520000
KS ci ratio: 1.385928e+00	ci left: 7.995353e-07	ci right 4.097347e-06	k: 7	n:3520000
ZNF845   3520000 perm   5338 sec   (659 perm/sec)   p_kst 1.988636e-06   p_cons 9.997861e-01   p_joint 1.818182e-05

Joint ci ratio: 4.862116e-01	ci left: 1.396258e-05	ci right 2.315195e-05	k: 64	n:3530000
Cons ci ratio: 3.057682e-05	ci left: 9.997697e-01	ci right 9.998006e-01	k: 3529243	n:3530000
KS ci ratio: 1.385928e+00	ci left: 7.972703e-07	ci right 4.085739e-06	k: 7	n:3530000
ZNF845   3530000 perm   5365 sec   (658 perm/sec)   p_kst 1.983003e-06   p_cons 9.997856e-01   p_joint 1.813031e-05

Joint ci ratio: 4.862116e-01	ci left: 1.392313e-05	ci right 2.308654e-05	k: 64	n:3540000
Cons ci ratio: 3.055072e-05	ci left: 9.997695e-01	ci right 9.998003e-01	k: 3539240	n:3540000
KS ci ratio: 1.385928e+00	ci left: 7.950182e-07	ci right 4.074198e-06	k: 7	n:3540000
ZNF845   3540000 perm   5394 sec   (656 perm/sec)   p_kst 1.977401e-06   p_cons 9.997853e-01   p_joint 1.807910e-05

Joint ci ratio: 4.862116e-01	ci left: 1.388391e-05	ci right 2.302151e-05	k: 64	n:3550000
Cons ci ratio: 3.050467e-05	ci left: 9.997696e-01	ci right 9.998003e-01	k: 3549238	n:3550000
KS ci ratio: 1.385928e+00	ci left: 7.927787e-07	ci right 4.062721e-06	k: 7	n:3550000
ZNF845   3550000 perm   5422 sec   (655 perm/sec)   p_kst 1.971831e-06   p_cons 9.997854e-01   p_joint 1.802817e-05

Joint ci ratio: 4.862117e-01	ci left: 1.384491e-05	ci right 2.295684e-05	k: 64	n:3560000
Cons ci ratio: 3.047873e-05	ci left: 9.997693e-01	ci right 9.998001e-01	k: 3559235	n:3560000
KS ci ratio: 1.385928e+00	ci left: 7.905518e-07	ci right 4.051309e-06	k: 7	n:3560000
ZNF845   3560000 perm   5451 sec   (653 perm/sec)   p_kst 1.966292e-06   p_cons 9.997851e-01   p_joint 1.797753e-05

Joint ci ratio: 4.862117e-01	ci left: 1.380613e-05	ci right 2.289254e-05	k: 64	n:3570000
Cons ci ratio: 3.041318e-05	ci left: 9.997697e-01	ci right 9.998004e-01	k: 3569234	n:3570000
KS ci ratio: 1.385928e+00	ci left: 7.883373e-07	ci right 4.039961e-06	k: 7	n:3570000
ZNF845   3570000 perm   5479 sec   (652 perm/sec)   p_kst 1.960784e-06   p_cons 9.997854e-01   p_joint 1.792717e-05

Joint ci ratio: 4.862117e-01	ci left: 1.376757e-05	ci right 2.282859e-05	k: 64	n:3580000
Cons ci ratio: 3.034799e-05	ci left: 9.997700e-01	ci right 9.998006e-01	k: 3579233	n:3580000
KS ci ratio: 1.385928e+00	ci left: 7.861353e-07	ci right 4.028676e-06	k: 7	n:3580000
ZNF845   3580000 perm   5508 sec   (650 perm/sec)   p_kst 1.955307e-06   p_cons 9.997858e-01   p_joint 1.787709e-05

Joint ci ratio: 4.862117e-01	ci left: 1.372922e-05	ci right 2.276501e-05	k: 64	n:3590000
Cons ci ratio: 3.028315e-05	ci left: 9.997704e-01	ci right 9.998009e-01	k: 3589232	n:3590000
KS ci ratio: 1.385928e+00	ci left: 7.839455e-07	ci right 4.017454e-06	k: 7	n:3590000
ZNF845   3590000 perm   5537 sec   (648 perm/sec)   p_kst 1.949861e-06   p_cons 9.997861e-01   p_joint 1.782730e-05

Joint ci ratio: 4.862117e-01	ci left: 1.369108e-05	ci right 2.270177e-05	k: 64	n:3600000
Cons ci ratio: 3.021865e-05	ci left: 9.997707e-01	ci right 9.998012e-01	k: 3599231	n:3600000
KS ci ratio: 1.385928e+00	ci left: 7.817679e-07	ci right 4.006295e-06	k: 7	n:3600000
ZNF845   3600000 perm   5566 sec   (647 perm/sec)   p_kst 1.944444e-06   p_cons 9.997864e-01   p_joint 1.777778e-05

Joint ci ratio: 4.862117e-01	ci left: 1.365316e-05	ci right 2.263888e-05	k: 64	n:3610000
Cons ci ratio: 3.019359e-05	ci left: 9.997705e-01	ci right 9.998010e-01	k: 3609228	n:3610000
KS ci ratio: 1.385928e+00	ci left: 7.796023e-07	ci right 3.995197e-06	k: 7	n:3610000
ZNF845   3610000 perm   5594 sec   (645 perm/sec)   p_kst 1.939058e-06   p_cons 9.997861e-01   p_joint 1.772853e-05

Joint ci ratio: 4.862117e-01	ci left: 1.361544e-05	ci right 2.257635e-05	k: 64	n:3620000
Cons ci ratio: 3.012965e-05	ci left: 9.997709e-01	ci right 9.998013e-01	k: 3619227	n:3620000
KS ci ratio: 1.385928e+00	ci left: 7.774487e-07	ci right 3.984160e-06	k: 7	n:3620000
ZNF845   3620000 perm   5623 sec   (644 perm/sec)   p_kst 1.933702e-06   p_cons 9.997865e-01   p_joint 1.767956e-05

Joint ci ratio: 4.825142e-01	ci left: 1.381976e-05	ci right 2.282304e-05	k: 65	n:3630000
Cons ci ratio: 3.006605e-05	ci left: 9.997712e-01	ci right 9.998015e-01	k: 3629226	n:3630000
KS ci ratio: 1.385928e+00	ci left: 7.753070e-07	ci right 3.973185e-06	k: 7	n:3630000
ZNF845   3630000 perm   5652 sec   (642 perm/sec)   p_kst 1.928375e-06   p_cons 9.997868e-01   p_joint 1.790634e-05

Joint ci ratio: 4.825142e-01	ci left: 1.378179e-05	ci right 2.276034e-05	k: 65	n:3640000
Cons ci ratio: 3.000278e-05	ci left: 9.997716e-01	ci right 9.998018e-01	k: 3639225	n:3640000
KS ci ratio: 1.385928e+00	ci left: 7.731770e-07	ci right 3.962269e-06	k: 7	n:3640000
ZNF845   3640000 perm   5681 sec   (641 perm/sec)   p_kst 1.923077e-06   p_cons 9.997871e-01   p_joint 1.785714e-05

Joint ci ratio: 4.825142e-01	ci left: 1.374403e-05	ci right 2.269798e-05	k: 65	n:3650000
Cons ci ratio: 2.999761e-05	ci left: 9.997710e-01	ci right 9.998013e-01	k: 3649221	n:3650000
KS ci ratio: 1.385928e+00	ci left: 7.710587e-07	ci right 3.951414e-06	k: 7	n:3650000
ZNF845   3650000 perm   5710 sec   (639 perm/sec)   p_kst 1.917808e-06   p_cons 9.997866e-01   p_joint 1.780822e-05

Joint ci ratio: 4.825142e-01	ci left: 1.370648e-05	ci right 2.263597e-05	k: 65	n:3660000
Cons ci ratio: 2.995397e-05	ci left: 9.997711e-01	ci right 9.998013e-01	k: 3659219	n:3660000
KS ci ratio: 1.385928e+00	ci left: 7.689520e-07	ci right 3.940618e-06	k: 7	n:3660000
ZNF845   3660000 perm   5738 sec   (638 perm/sec)   p_kst 1.912568e-06   p_cons 9.997866e-01   p_joint 1.775956e-05

Joint ci ratio: 4.825142e-01	ci left: 1.366913e-05	ci right 2.257429e-05	k: 65	n:3670000
Cons ci ratio: 2.994867e-05	ci left: 9.997706e-01	ci right 9.998008e-01	k: 3669215	n:3670000
KS ci ratio: 1.385928e+00	ci left: 7.668568e-07	ci right 3.929880e-06	k: 7	n:3670000
ZNF845   3670000 perm   5767 sec   (636 perm/sec)   p_kst 1.907357e-06   p_cons 9.997861e-01   p_joint 1.771117e-05

Joint ci ratio: 4.825143e-01	ci left: 1.363199e-05	ci right 2.251294e-05	k: 65	n:3680000
Cons ci ratio: 2.992423e-05	ci left: 9.997704e-01	ci right 9.998006e-01	k: 3679212	n:3680000
KS ci ratio: 1.385928e+00	ci left: 7.647729e-07	ci right 3.919201e-06	k: 7	n:3680000
ZNF845   3680000 perm   5797 sec   (635 perm/sec)   p_kst 1.902174e-06   p_cons 9.997859e-01   p_joint 1.766304e-05

Joint ci ratio: 4.825143e-01	ci left: 1.359505e-05	ci right 2.245193e-05	k: 65	n:3690000
Cons ci ratio: 2.991870e-05	ci left: 9.997699e-01	ci right 9.998001e-01	k: 3689208	n:3690000
KS ci ratio: 1.385928e+00	ci left: 7.627003e-07	ci right 3.908580e-06	k: 7	n:3690000
ZNF845   3690000 perm   5827 sec   (633 perm/sec)   p_kst 1.897019e-06   p_cons 9.997854e-01   p_joint 1.761518e-05

Joint ci ratio: 4.825143e-01	ci left: 1.355830e-05	ci right 2.239125e-05	k: 65	n:3700000
Cons ci ratio: 2.987544e-05	ci left: 9.997699e-01	ci right 9.998001e-01	k: 3699206	n:3700000
KS ci ratio: 1.385928e+00	ci left: 7.606390e-07	ci right 3.898016e-06	k: 7	n:3700000
ZNF845   3700000 perm   5857 sec   (632 perm/sec)   p_kst 1.891892e-06   p_cons 9.997854e-01   p_joint 1.756757e-05

Joint ci ratio: 4.825143e-01	ci left: 1.352176e-05	ci right 2.233090e-05	k: 65	n:3710000
Cons ci ratio: 2.979490e-05	ci left: 9.997706e-01	ci right 9.998006e-01	k: 3709206	n:3710000
KS ci ratio: 1.385928e+00	ci left: 7.585887e-07	ci right 3.887510e-06	k: 7	n:3710000
ZNF845   3710000 perm   5887 sec   (630 perm/sec)   p_kst 1.886792e-06   p_cons 9.997860e-01   p_joint 1.752022e-05

Joint ci ratio: 4.825143e-01	ci left: 1.348541e-05	ci right 2.227087e-05	k: 65	n:3720000
Cons ci ratio: 2.973349e-05	ci left: 9.997709e-01	ci right 9.998009e-01	k: 3719205	n:3720000
KS ci ratio: 1.385928e+00	ci left: 7.565495e-07	ci right 3.877059e-06	k: 7	n:3720000
ZNF845   3720000 perm   5916 sec   (629 perm/sec)   p_kst 1.881720e-06   p_cons 9.997863e-01   p_joint 1.747312e-05

Joint ci ratio: 4.825143e-01	ci left: 1.344925e-05	ci right 2.221116e-05	k: 65	n:3730000
Cons ci ratio: 2.967239e-05	ci left: 9.997712e-01	ci right 9.998012e-01	k: 3729204	n:3730000
KS ci ratio: 1.385928e+00	ci left: 7.545212e-07	ci right 3.866665e-06	k: 7	n:3730000
ZNF845   3730000 perm   5946 sec   (627 perm/sec)   p_kst 1.876676e-06   p_cons 9.997866e-01   p_joint 1.742627e-05

Joint ci ratio: 4.788999e-01	ci left: 1.364826e-05	ci right 2.245133e-05	k: 66	n:3740000
Cons ci ratio: 2.963016e-05	ci left: 9.997713e-01	ci right 9.998012e-01	k: 3739202	n:3740000
KS ci ratio: 1.385928e+00	ci left: 7.525038e-07	ci right 3.856326e-06	k: 7	n:3740000
ZNF845   3740000 perm   5976 sec   (626 perm/sec)   p_kst 1.871658e-06   p_cons 9.997866e-01   p_joint 1.764706e-05

Joint ci ratio: 4.788999e-01	ci left: 1.361186e-05	ci right 2.239146e-05	k: 66	n:3750000
Cons ci ratio: 2.960657e-05	ci left: 9.997711e-01	ci right 9.998009e-01	k: 3749199	n:3750000
KS ci ratio: 1.385928e+00	ci left: 7.504971e-07	ci right 3.846043e-06	k: 7	n:3750000
ZNF845   3750000 perm   6006 sec   (624 perm/sec)   p_kst 1.866667e-06   p_cons 9.997864e-01   p_joint 1.760000e-05

Joint ci ratio: 4.788999e-01	ci left: 1.357566e-05	ci right 2.233191e-05	k: 66	n:3760000
Cons ci ratio: 2.954623e-05	ci left: 9.997714e-01	ci right 9.998012e-01	k: 3759198	n:3760000
KS ci ratio: 1.385928e+00	ci left: 7.485011e-07	ci right 3.835814e-06	k: 7	n:3760000
ZNF845   3760000 perm   6036 sec   (623 perm/sec)   p_kst 1.861702e-06   p_cons 9.997867e-01   p_joint 1.755319e-05

Joint ci ratio: 4.788999e-01	ci left: 1.353965e-05	ci right 2.227267e-05	k: 66	n:3770000
Cons ci ratio: 2.948620e-05	ci left: 9.997717e-01	ci right 9.998015e-01	k: 3769197	n:3770000
KS ci ratio: 1.385928e+00	ci left: 7.465157e-07	ci right 3.825640e-06	k: 7	n:3770000
ZNF845   3770000 perm   6066 sec   (622 perm/sec)   p_kst 1.856764e-06   p_cons 9.997870e-01   p_joint 1.750663e-05

Joint ci ratio: 4.788999e-01	ci left: 1.350383e-05	ci right 2.221375e-05	k: 66	n:3780000
Cons ci ratio: 2.946301e-05	ci left: 9.997715e-01	ci right 9.998012e-01	k: 3779194	n:3780000
KS ci ratio: 1.385928e+00	ci left: 7.445408e-07	ci right 3.815519e-06	k: 7	n:3780000
ZNF845   3780000 perm   6096 sec   (620 perm/sec)   p_kst 1.851852e-06   p_cons 9.997868e-01   p_joint 1.746032e-05

Joint ci ratio: 4.788999e-01	ci left: 1.346820e-05	ci right 2.215514e-05	k: 66	n:3790000
Cons ci ratio: 2.947617e-05	ci left: 9.997708e-01	ci right 9.998005e-01	k: 3789189	n:3790000
KS ci ratio: 1.385928e+00	ci left: 7.425763e-07	ci right 3.805452e-06	k: 7	n:3790000
ZNF845   3790000 perm   6126 sec   (619 perm/sec)   p_kst 1.846966e-06   p_cons 9.997860e-01   p_joint 1.741425e-05

Joint ci ratio: 4.788999e-01	ci left: 1.343276e-05	ci right 2.209684e-05	k: 66	n:3800000
Cons ci ratio: 2.948899e-05	ci left: 9.997700e-01	ci right 9.997997e-01	k: 3799184	n:3800000
KS ci ratio: 1.385928e+00	ci left: 7.406222e-07	ci right 3.795437e-06	k: 7	n:3800000
ZNF845   3800000 perm   6157 sec   (617 perm/sec)   p_kst 1.842105e-06   p_cons 9.997853e-01   p_joint 1.736842e-05

Joint ci ratio: 4.788999e-01	ci left: 1.339750e-05	ci right 2.203884e-05	k: 66	n:3810000
Cons ci ratio: 2.944757e-05	ci left: 9.997701e-01	ci right 9.997998e-01	k: 3809182	n:3810000
KS ci ratio: 1.385928e+00	ci left: 7.386783e-07	ci right 3.785475e-06	k: 7	n:3810000
ZNF845   3810000 perm   6188 sec   (616 perm/sec)   p_kst 1.837270e-06   p_cons 9.997853e-01   p_joint 1.732283e-05

Joint ci ratio: 4.789000e-01	ci left: 1.336243e-05	ci right 2.198115e-05	k: 66	n:3820000
Cons ci ratio: 2.940632e-05	ci left: 9.997701e-01	ci right 9.997998e-01	k: 3819180	n:3820000
KS ci ratio: 1.385928e+00	ci left: 7.367446e-07	ci right 3.775566e-06	k: 7	n:3820000
ZNF845   3820000 perm   6219 sec   (614 perm/sec)   p_kst 1.832461e-06   p_cons 9.997853e-01   p_joint 1.727749e-05

Joint ci ratio: 4.753655e-01	ci left: 1.355723e-05	ci right 2.221604e-05	k: 67	n:3830000
Cons ci ratio: 2.934739e-05	ci left: 9.997705e-01	ci right 9.998001e-01	k: 3829179	n:3830000
KS ci ratio: 1.306665e+00	ci left: 9.017843e-07	ci right 4.115711e-06	k: 8	n:3830000
ZNF845   3830000 perm   6250 sec   (613 perm/sec)   p_kst 2.088773e-06   p_cons 9.997856e-01   p_joint 1.749347e-05

Joint ci ratio: 4.753656e-01	ci left: 1.352192e-05	ci right 2.215819e-05	k: 67	n:3840000
Cons ci ratio: 2.934211e-05	ci left: 9.997700e-01	ci right 9.997996e-01	k: 3839175	n:3840000
KS ci ratio: 1.306665e+00	ci left: 8.994359e-07	ci right 4.104993e-06	k: 8	n:3840000
ZNF845   3840000 perm   6282 sec   (611 perm/sec)   p_kst 2.083333e-06   p_cons 9.997852e-01   p_joint 1.744792e-05

Joint ci ratio: 4.719083e-01	ci left: 1.371552e-05	ci right 2.239117e-05	k: 68	n:3850000
Cons ci ratio: 2.931900e-05	ci left: 9.997698e-01	ci right 9.997993e-01	k: 3849172	n:3850000
KS ci ratio: 1.306665e+00	ci left: 8.970997e-07	ci right 4.094331e-06	k: 8	n:3850000
ZNF845   3850000 perm   6312 sec   (610 perm/sec)   p_kst 2.077922e-06   p_cons 9.997849e-01   p_joint 1.766234e-05

Joint ci ratio: 4.719083e-01	ci left: 1.367999e-05	ci right 2.233316e-05	k: 68	n:3860000
Cons ci ratio: 2.926067e-05	ci left: 9.997701e-01	ci right 9.997996e-01	k: 3859171	n:3860000
KS ci ratio: 1.306665e+00	ci left: 8.947756e-07	ci right 4.083724e-06	k: 8	n:3860000
ZNF845   3860000 perm   6342 sec   (609 perm/sec)   p_kst 2.072539e-06   p_cons 9.997852e-01   p_joint 1.761658e-05

Joint ci ratio: 4.685253e-01	ci left: 1.387241e-05	ci right 2.256427e-05	k: 69	n:3870000
Cons ci ratio: 2.923776e-05	ci left: 9.997699e-01	ci right 9.997994e-01	k: 3869168	n:3870000
KS ci ratio: 1.306665e+00	ci left: 8.924635e-07	ci right 4.073171e-06	k: 8	n:3870000
ZNF845   3870000 perm   6373 sec   (607 perm/sec)   p_kst 2.067183e-06   p_cons 9.997850e-01   p_joint 1.782946e-05

Joint ci ratio: 4.685253e-01	ci left: 1.383665e-05	ci right 2.250611e-05	k: 69	n:3880000
Cons ci ratio: 2.923234e-05	ci left: 9.997694e-01	ci right 9.997989e-01	k: 3879164	n:3880000
KS ci ratio: 1.306665e+00	ci left: 8.901633e-07	ci right 4.062674e-06	k: 8	n:3880000
ZNF845   3880000 perm   6404 sec   (606 perm/sec)   p_kst 2.061856e-06   p_cons 9.997845e-01   p_joint 1.778351e-05

Joint ci ratio: 4.685253e-01	ci left: 1.380108e-05	ci right 2.244825e-05	k: 69	n:3890000
Cons ci ratio: 2.922679e-05	ci left: 9.997690e-01	ci right 9.997984e-01	k: 3889160	n:3890000
KS ci ratio: 1.306665e+00	ci left: 8.878750e-07	ci right 4.052230e-06	k: 8	n:3890000
ZNF845   3890000 perm   6435 sec   (605 perm/sec)   p_kst 2.056555e-06   p_cons 9.997841e-01   p_joint 1.773779e-05

Joint ci ratio: 4.685254e-01	ci left: 1.376570e-05	ci right 2.239070e-05	k: 69	n:3900000
Cons ci ratio: 2.918649e-05	ci left: 9.997690e-01	ci right 9.997984e-01	k: 3899158	n:3900000
KS ci ratio: 1.306665e+00	ci left: 8.855984e-07	ci right 4.041839e-06	k: 8	n:3900000
ZNF845   3900000 perm   6466 sec   (603 perm/sec)   p_kst 2.051282e-06   p_cons 9.997841e-01   p_joint 1.769231e-05

Joint ci ratio: 4.652141e-01	ci left: 1.395615e-05	ci right 2.261907e-05	k: 70	n:3910000
Cons ci ratio: 2.914636e-05	ci left: 9.997691e-01	ci right 9.997985e-01	k: 3909156	n:3910000
KS ci ratio: 1.306665e+00	ci left: 8.833334e-07	ci right 4.031502e-06	k: 8	n:3910000
ZNF845   3910000 perm   6497 sec   (602 perm/sec)   p_kst 2.046036e-06   p_cons 9.997841e-01   p_joint 1.790281e-05

Joint ci ratio: 4.652141e-01	ci left: 1.392054e-05	ci right 2.256137e-05	k: 70	n:3920000
Cons ci ratio: 2.914074e-05	ci left: 9.997686e-01	ci right 9.997980e-01	k: 3919152	n:3920000
KS ci ratio: 1.306665e+00	ci left: 8.810800e-07	ci right 4.021218e-06	k: 8	n:3920000
ZNF845   3920000 perm   6527 sec   (601 perm/sec)   p_kst 2.040816e-06   p_cons 9.997837e-01   p_joint 1.785714e-05

Joint ci ratio: 4.652141e-01	ci left: 1.388512e-05	ci right 2.250396e-05	k: 70	n:3930000
Cons ci ratio: 2.911790e-05	ci left: 9.997684e-01	ci right 9.997978e-01	k: 3929149	n:3930000
KS ci ratio: 1.306665e+00	ci left: 8.788381e-07	ci right 4.010986e-06	k: 8	n:3930000
ZNF845   3930000 perm   6558 sec   (599 perm/sec)   p_kst 2.035623e-06   p_cons 9.997835e-01   p_joint 1.781170e-05

Joint ci ratio: 4.652142e-01	ci left: 1.384988e-05	ci right 2.244685e-05	k: 70	n:3940000
Cons ci ratio: 2.907807e-05	ci left: 9.997685e-01	ci right 9.997978e-01	k: 3939147	n:3940000
KS ci ratio: 1.306665e+00	ci left: 8.766075e-07	ci right 4.000806e-06	k: 8	n:3940000
ZNF845   3940000 perm   6590 sec   (598 perm/sec)   p_kst 2.030457e-06   p_cons 9.997835e-01   p_joint 1.776650e-05

Joint ci ratio: 4.825146e-01	ci left: 1.270018e-05	ci right 2.097409e-05	k: 65	n:3950000
Cons ci ratio: 2.903840e-05	ci left: 9.997685e-01	ci right 9.997978e-01	k: 3949145	n:3950000
KS ci ratio: 1.306665e+00	ci left: 8.743883e-07	ci right 3.990677e-06	k: 8	n:3950000
ZNF845   3950000 perm   6621 sec   (597 perm/sec)   p_kst 2.025316e-06   p_cons 9.997835e-01   p_joint 1.645570e-05

Joint ci ratio: 4.825146e-01	ci left: 1.266811e-05	ci right 2.092112e-05	k: 65	n:3960000
Cons ci ratio: 2.898198e-05	ci left: 9.997689e-01	ci right 9.997981e-01	k: 3959144	n:3960000
KS ci ratio: 1.306665e+00	ci left: 8.721802e-07	ci right 3.980599e-06	k: 8	n:3960000
ZNF845   3960000 perm   6654 sec   (595 perm/sec)   p_kst 2.020202e-06   p_cons 9.997838e-01   p_joint 1.641414e-05

Joint ci ratio: 4.825146e-01	ci left: 1.263620e-05	ci right 2.086843e-05	k: 65	n:3970000
Cons ci ratio: 2.895953e-05	ci left: 9.997687e-01	ci right 9.997979e-01	k: 3969141	n:3970000
KS ci ratio: 1.306665e+00	ci left: 8.699833e-07	ci right 3.970573e-06	k: 8	n:3970000
ZNF845   3970000 perm   6686 sec   (594 perm/sec)   p_kst 2.015113e-06   p_cons 9.997836e-01   p_joint 1.637280e-05

Joint ci ratio: 4.825146e-01	ci left: 1.260445e-05	ci right 2.081599e-05	k: 65	n:3980000
Cons ci ratio: 2.897063e-05	ci left: 9.997679e-01	ci right 9.997971e-01	k: 3979136	n:3980000
KS ci ratio: 1.306665e+00	ci left: 8.677974e-07	ci right 3.960596e-06	k: 8	n:3980000
ZNF845   3980000 perm   6719 sec   (592 perm/sec)   p_kst 2.010050e-06   p_cons 9.997829e-01   p_joint 1.633166e-05

Joint ci ratio: 4.789001e-01	ci left: 1.279310e-05	ci right 2.104461e-05	k: 66	n:3990000
Cons ci ratio: 2.891472e-05	ci left: 9.997683e-01	ci right 9.997974e-01	k: 3989135	n:3990000
KS ci ratio: 1.306665e+00	ci left: 8.656225e-07	ci right 3.950670e-06	k: 8	n:3990000
ZNF845   3990000 perm   6751 sec   (591 perm/sec)   p_kst 2.005013e-06   p_cons 9.997832e-01   p_joint 1.654135e-05

Joint ci ratio: 4.789002e-01	ci left: 1.276112e-05	ci right 2.099200e-05	k: 66	n:4000000
Cons ci ratio: 2.885908e-05	ci left: 9.997686e-01	ci right 9.997977e-01	k: 3999134	n:4000000
KS ci ratio: 1.306665e+00	ci left: 8.634584e-07	ci right 3.940793e-06	k: 8	n:4000000
ZNF845   4000000 perm   6783 sec   (590 perm/sec)   p_kst 2.000000e-06   p_cons 9.997835e-01   p_joint 1.650000e-05

Joint ci ratio: 4.789002e-01	ci left: 1.272930e-05	ci right 2.093965e-05	k: 66	n:4010000
Cons ci ratio: 2.880370e-05	ci left: 9.997689e-01	ci right 9.997979e-01	k: 4009133	n:4010000
KS ci ratio: 1.306665e+00	ci left: 8.613052e-07	ci right 3.930966e-06	k: 8	n:4010000
ZNF845   4010000 perm   6816 sec   (588 perm/sec)   p_kst 1.995012e-06   p_cons 9.997838e-01   p_joint 1.645885e-05

Joint ci ratio: 4.753657e-01	ci left: 1.291646e-05	ci right 2.116603e-05	k: 67	n:4020000
Cons ci ratio: 2.873204e-05	ci left: 9.997695e-01	ci right 9.997984e-01	k: 4019133	n:4020000
KS ci ratio: 1.306665e+00	ci left: 8.591626e-07	ci right 3.921188e-06	k: 8	n:4020000
ZNF845   4020000 perm   6848 sec   (587 perm/sec)   p_kst 1.990050e-06   p_cons 9.997843e-01   p_joint 1.666667e-05

Joint ci ratio: 4.753658e-01	ci left: 1.288441e-05	ci right 2.111351e-05	k: 67	n:4030000
Cons ci ratio: 2.866074e-05	ci left: 9.997701e-01	ci right 9.997989e-01	k: 4029133	n:4030000
KS ci ratio: 1.306665e+00	ci left: 8.570307e-07	ci right 3.911458e-06	k: 8	n:4030000
ZNF845   4030000 perm   6879 sec   (586 perm/sec)   p_kst 1.985112e-06   p_cons 9.997849e-01   p_joint 1.662531e-05

Joint ci ratio: 4.753658e-01	ci left: 1.285252e-05	ci right 2.106125e-05	k: 67	n:4040000
Cons ci ratio: 2.860626e-05	ci left: 9.997704e-01	ci right 9.997992e-01	k: 4039132	n:4040000
KS ci ratio: 1.306665e+00	ci left: 8.549093e-07	ci right 3.901776e-06	k: 8	n:4040000
ZNF845   4040000 perm   6911 sec   (585 perm/sec)   p_kst 1.980198e-06   p_cons 9.997851e-01   p_joint 1.658416e-05

Joint ci ratio: 4.753658e-01	ci left: 1.282078e-05	ci right 2.100924e-05	k: 67	n:4050000
Cons ci ratio: 2.855203e-05	ci left: 9.997707e-01	ci right 9.997995e-01	k: 4049131	n:4050000
KS ci ratio: 1.306665e+00	ci left: 8.527984e-07	ci right 3.892142e-06	k: 8	n:4050000
ZNF845   4050000 perm   6944 sec   (583 perm/sec)   p_kst 1.975309e-06   p_cons 9.997854e-01   p_joint 1.654321e-05

Joint ci ratio: 4.789002e-01	ci left: 1.257253e-05	ci right 2.068177e-05	k: 66	n:4060000
Cons ci ratio: 2.854712e-05	ci left: 9.997702e-01	ci right 9.997990e-01	k: 4059127	n:4060000
KS ci ratio: 1.306665e+00	ci left: 8.506980e-07	ci right 3.882555e-06	k: 8	n:4060000
ZNF845   4060000 perm   6976 sec   (582 perm/sec)   p_kst 1.970443e-06   p_cons 9.997850e-01   p_joint 1.625616e-05

Joint ci ratio: 4.789002e-01	ci left: 1.254164e-05	ci right 2.063096e-05	k: 66	n:4070000
Cons ci ratio: 2.849326e-05	ci left: 9.997705e-01	ci right 9.997993e-01	k: 4069126	n:4070000
KS ci ratio: 1.306665e+00	ci left: 8.486078e-07	ci right 3.873016e-06	k: 8	n:4070000
ZNF845   4070000 perm   7008 sec   (581 perm/sec)   p_kst 1.965602e-06   p_cons 9.997853e-01   p_joint 1.621622e-05

Joint ci ratio: 4.789002e-01	ci left: 1.251090e-05	ci right 2.058039e-05	k: 66	n:4080000
Cons ci ratio: 2.852072e-05	ci left: 9.997696e-01	ci right 9.997983e-01	k: 4079120	n:4080000
KS ci ratio: 1.306665e+00	ci left: 8.465279e-07	ci right 3.863523e-06	k: 8	n:4080000
ZNF845   4080000 perm   7041 sec   (579 perm/sec)   p_kst 1.960784e-06   p_cons 9.997843e-01   p_joint 1.617647e-05

Joint ci ratio: 4.789002e-01	ci left: 1.248031e-05	ci right 2.053007e-05	k: 66	n:4090000
Cons ci ratio: 2.853162e-05	ci left: 9.997689e-01	ci right 9.997976e-01	k: 4089115	n:4090000
KS ci ratio: 1.306665e+00	ci left: 8.444581e-07	ci right 3.854077e-06	k: 8	n:4090000
ZNF845   4090000 perm   7074 sec   (578 perm/sec)   p_kst 1.955990e-06   p_cons 9.997836e-01   p_joint 1.613692e-05

Joint ci ratio: 4.789003e-01	ci left: 1.244987e-05	ci right 2.048000e-05	k: 66	n:4100000
Cons ci ratio: 2.849413e-05	ci left: 9.997689e-01	ci right 9.997977e-01	k: 4099113	n:4100000
KS ci ratio: 1.306665e+00	ci left: 8.423985e-07	ci right 3.844677e-06	k: 8	n:4100000
ZNF845   4100000 perm   7106 sec   (577 perm/sec)   p_kst 1.951220e-06   p_cons 9.997837e-01   p_joint 1.609756e-05

Joint ci ratio: 4.753658e-01	ci left: 1.263362e-05	ci right 2.070254e-05	k: 67	n:4110000
Cons ci ratio: 2.842480e-05	ci left: 9.997695e-01	ci right 9.997982e-01	k: 4109113	n:4110000
KS ci ratio: 1.306665e+00	ci left: 8.403488e-07	ci right 3.835322e-06	k: 8	n:4110000
ZNF845   4110000 perm   7138 sec   (576 perm/sec)   p_kst 1.946472e-06   p_cons 9.997842e-01   p_joint 1.630170e-05

Joint ci ratio: 4.753658e-01	ci left: 1.260295e-05	ci right 2.065229e-05	k: 67	n:4120000
Cons ci ratio: 2.835580e-05	ci left: 9.997701e-01	ci right 9.997986e-01	k: 4119113	n:4120000
KS ci ratio: 1.306665e+00	ci left: 8.383091e-07	ci right 3.826013e-06	k: 8	n:4120000
ZNF845   4120000 perm   7171 sec   (575 perm/sec)   p_kst 1.941748e-06   p_cons 9.997847e-01   p_joint 1.626214e-05

Joint ci ratio: 4.753659e-01	ci left: 1.257244e-05	ci right 2.060229e-05	k: 67	n:4130000
Cons ci ratio: 2.830306e-05	ci left: 9.997704e-01	ci right 9.997989e-01	k: 4129112	n:4130000
KS ci ratio: 1.306665e+00	ci left: 8.362793e-07	ci right 3.816749e-06	k: 8	n:4130000
ZNF845   4130000 perm   7204 sec   (573 perm/sec)   p_kst 1.937046e-06   p_cons 9.997850e-01   p_joint 1.622276e-05

Joint ci ratio: 4.753659e-01	ci left: 1.254207e-05	ci right 2.055252e-05	k: 67	n:4140000
Cons ci ratio: 2.828230e-05	ci left: 9.997702e-01	ci right 9.997987e-01	k: 4139109	n:4140000
KS ci ratio: 1.306665e+00	ci left: 8.342593e-07	ci right 3.807530e-06	k: 8	n:4140000
ZNF845   4140000 perm   7236 sec   (572 perm/sec)   p_kst 1.932367e-06   p_cons 9.997848e-01   p_joint 1.618357e-05

Joint ci ratio: 4.753659e-01	ci left: 1.251185e-05	ci right 2.050300e-05	k: 67	n:4150000
Cons ci ratio: 2.827734e-05	ci left: 9.997697e-01	ci right 9.997982e-01	k: 4149105	n:4150000
KS ci ratio: 1.306665e+00	ci left: 8.322491e-07	ci right 3.798355e-06	k: 8	n:4150000
ZNF845   4150000 perm   7268 sec   (571 perm/sec)   p_kst 1.927711e-06   p_cons 9.997843e-01   p_joint 1.614458e-05

Joint ci ratio: 4.719086e-01	ci left: 1.269345e-05	ci right 2.072260e-05	k: 68	n:4160000
Cons ci ratio: 2.820936e-05	ci left: 9.997703e-01	ci right 9.997987e-01	k: 4159105	n:4160000
KS ci ratio: 1.306665e+00	ci left: 8.302485e-07	ci right 3.789225e-06	k: 8	n:4160000
ZNF845   4160000 perm   7301 sec   (570 perm/sec)   p_kst 1.923077e-06   p_cons 9.997849e-01   p_joint 1.634615e-05

Joint ci ratio: 4.719086e-01	ci left: 1.266301e-05	ci right 2.067291e-05	k: 68	n:4170000
Cons ci ratio: 2.818879e-05	ci left: 9.997701e-01	ci right 9.997985e-01	k: 4169102	n:4170000
KS ci ratio: 1.306665e+00	ci left: 8.282575e-07	ci right 3.780138e-06	k: 8	n:4170000
ZNF845   4170000 perm   7334 sec   (569 perm/sec)   p_kst 1.918465e-06   p_cons 9.997847e-01   p_joint 1.630695e-05

Joint ci ratio: 4.719086e-01	ci left: 1.263272e-05	ci right 2.062345e-05	k: 68	n:4180000
Cons ci ratio: 2.812134e-05	ci left: 9.997706e-01	ci right 9.997990e-01	k: 4179102	n:4180000
KS ci ratio: 1.306665e+00	ci left: 8.262760e-07	ci right 3.771094e-06	k: 8	n:4180000
ZNF845   4180000 perm   7366 sec   (567 perm/sec)   p_kst 1.913876e-06   p_cons 9.997852e-01   p_joint 1.626794e-05

Joint ci ratio: 4.719086e-01	ci left: 1.260257e-05	ci right 2.057423e-05	k: 68	n:4190000
Cons ci ratio: 2.808542e-05	ci left: 9.997707e-01	ci right 9.997990e-01	k: 4189100	n:4190000
KS ci ratio: 1.306665e+00	ci left: 8.243040e-07	ci right 3.762094e-06	k: 8	n:4190000
ZNF845   4190000 perm   7398 sec   (566 perm/sec)   p_kst 1.909308e-06   p_cons 9.997852e-01   p_joint 1.622912e-05

Joint ci ratio: 4.719086e-01	ci left: 1.257256e-05	ci right 2.052524e-05	k: 68	n:4200000
Cons ci ratio: 2.804963e-05	ci left: 9.997708e-01	ci right 9.997990e-01	k: 4199098	n:4200000
KS ci ratio: 1.306665e+00	ci left: 8.223413e-07	ci right 3.753137e-06	k: 8	n:4200000
ZNF845   4200000 perm   7432 sec   (565 perm/sec)   p_kst 1.904762e-06   p_cons 9.997852e-01   p_joint 1.619048e-05

Joint ci ratio: 4.719086e-01	ci left: 1.254270e-05	ci right 2.047649e-05	k: 68	n:4210000
Cons ci ratio: 2.801397e-05	ci left: 9.997708e-01	ci right 9.997990e-01	k: 4209096	n:4210000
KS ci ratio: 1.306665e+00	ci left: 8.203880e-07	ci right 3.744222e-06	k: 8	n:4210000
ZNF845   4210000 perm   7466 sec   (564 perm/sec)   p_kst 1.900238e-06   p_cons 9.997853e-01   p_joint 1.615202e-05

Joint ci ratio: 4.719086e-01	ci left: 1.251297e-05	ci right 2.042797e-05	k: 68	n:4220000
Cons ci ratio: 2.796302e-05	ci left: 9.997711e-01	ci right 9.997993e-01	k: 4219095	n:4220000
KS ci ratio: 1.306665e+00	ci left: 8.184440e-07	ci right 3.735349e-06	k: 8	n:4220000
ZNF845   4220000 perm   7500 sec   (563 perm/sec)   p_kst 1.895735e-06   p_cons 9.997855e-01   p_joint 1.611374e-05

Joint ci ratio: 4.719086e-01	ci left: 1.248339e-05	ci right 2.037967e-05	k: 68	n:4230000
Cons ci ratio: 2.792769e-05	ci left: 9.997712e-01	ci right 9.997993e-01	k: 4229093	n:4230000
KS ci ratio: 1.306665e+00	ci left: 8.165091e-07	ci right 3.726519e-06	k: 8	n:4230000
ZNF845   4230000 perm   7533 sec   (562 perm/sec)   p_kst 1.891253e-06   p_cons 9.997856e-01   p_joint 1.607565e-05

Joint ci ratio: 4.719086e-01	ci left: 1.245395e-05	ci right 2.033161e-05	k: 68	n:4240000
Cons ci ratio: 2.792313e-05	ci left: 9.997707e-01	ci right 9.997989e-01	k: 4239089	n:4240000
KS ci ratio: 1.306665e+00	ci left: 8.145834e-07	ci right 3.717730e-06	k: 8	n:4240000
ZNF845   4240000 perm   7567 sec   (560 perm/sec)   p_kst 1.886792e-06   p_cons 9.997851e-01   p_joint 1.603774e-05

Joint ci ratio: 4.719087e-01	ci left: 1.242465e-05	ci right 2.028377e-05	k: 68	n:4250000
Cons ci ratio: 2.790321e-05	ci left: 9.997705e-01	ci right 9.997987e-01	k: 4249086	n:4250000
KS ci ratio: 1.306665e+00	ci left: 8.126667e-07	ci right 3.708982e-06	k: 8	n:4250000
ZNF845   4250000 perm   7601 sec   (559 perm/sec)   p_kst 1.882353e-06   p_cons 9.997849e-01   p_joint 1.600000e-05

Joint ci ratio: 4.719087e-01	ci left: 1.239548e-05	ci right 2.023615e-05	k: 68	n:4260000
Cons ci ratio: 2.788331e-05	ci left: 9.997703e-01	ci right 9.997984e-01	k: 4259083	n:4260000
KS ci ratio: 1.306665e+00	ci left: 8.107591e-07	ci right 3.700276e-06	k: 8	n:4260000
ZNF845   4260000 perm   7635 sec   (558 perm/sec)   p_kst 1.877934e-06   p_cons 9.997847e-01   p_joint 1.596244e-05

Joint ci ratio: 4.719087e-01	ci left: 1.236645e-05	ci right 2.018876e-05	k: 68	n:4270000
Cons ci ratio: 2.783315e-05	ci left: 9.997706e-01	ci right 9.997987e-01	k: 4269082	n:4270000
KS ci ratio: 1.306665e+00	ci left: 8.088603e-07	ci right 3.691610e-06	k: 8	n:4270000
ZNF845   4270000 perm   7669 sec   (557 perm/sec)   p_kst 1.873536e-06   p_cons 9.997850e-01   p_joint 1.592506e-05

Joint ci ratio: 4.862124e-01	ci left: 1.151586e-05	ci right 1.909495e-05	k: 64	n:4280000
Cons ci ratio: 2.778322e-05	ci left: 9.997709e-01	ci right 9.997989e-01	k: 4279081	n:4280000
KS ci ratio: 1.306665e+00	ci left: 8.069705e-07	ci right 3.682985e-06	k: 8	n:4280000
ZNF845   4280000 perm   7704 sec   (556 perm/sec)   p_kst 1.869159e-06   p_cons 9.997853e-01   p_joint 1.495327e-05

Joint ci ratio: 4.862124e-01	ci left: 1.148902e-05	ci right 1.905044e-05	k: 64	n:4290000
Cons ci ratio: 2.777866e-05	ci left: 9.997705e-01	ci right 9.997985e-01	k: 4289077	n:4290000
KS ci ratio: 1.306665e+00	ci left: 8.050894e-07	ci right 3.674400e-06	k: 8	n:4290000
ZNF845   4290000 perm   7737 sec   (554 perm/sec)   p_kst 1.864802e-06   p_cons 9.997848e-01   p_joint 1.491841e-05

Joint ci ratio: 4.862124e-01	ci left: 1.146230e-05	ci right 1.900614e-05	k: 64	n:4300000
Cons ci ratio: 2.772905e-05	ci left: 9.997708e-01	ci right 9.997987e-01	k: 4299076	n:4300000
KS ci ratio: 1.306665e+00	ci left: 8.032171e-07	ci right 3.665855e-06	k: 8	n:4300000
ZNF845   4300000 perm   7771 sec   (553 perm/sec)   p_kst 1.860465e-06   p_cons 9.997851e-01   p_joint 1.488372e-05

Joint ci ratio: 4.862124e-01	ci left: 1.143570e-05	ci right 1.896204e-05	k: 64	n:4310000
Cons ci ratio: 2.773939e-05	ci left: 9.997701e-01	ci right 9.997981e-01	k: 4309071	n:4310000
KS ci ratio: 1.306665e+00	ci left: 8.013535e-07	ci right 3.657349e-06	k: 8	n:4310000
ZNF845   4310000 perm   7805 sec   (552 perm/sec)   p_kst 1.856148e-06   p_cons 9.997845e-01   p_joint 1.484919e-05

Joint ci ratio: 4.825149e-01	ci left: 1.161243e-05	ci right 1.917770e-05	k: 65	n:4320000
Cons ci ratio: 2.773464e-05	ci left: 9.997697e-01	ci right 9.997977e-01	k: 4319067	n:4320000
KS ci ratio: 1.239611e+00	ci left: 9.526331e-07	ci right 3.954812e-06	k: 9	n:4320000
ZNF845   4320000 perm   7840 sec   (551 perm/sec)   p_kst 2.083333e-06   p_cons 9.997840e-01   p_joint 1.504630e-05

Joint ci ratio: 4.825149e-01	ci left: 1.158561e-05	ci right 1.913341e-05	k: 65	n:4330000
Cons ci ratio: 2.770019e-05	ci left: 9.997698e-01	ci right 9.997977e-01	k: 4329065	n:4330000
KS ci ratio: 1.239611e+00	ci left: 9.504330e-07	ci right 3.945678e-06	k: 9	n:4330000
ZNF845   4330000 perm   7874 sec   (550 perm/sec)   p_kst 2.078522e-06   p_cons 9.997841e-01   p_joint 1.501155e-05

Joint ci ratio: 4.825149e-01	ci left: 1.155892e-05	ci right 1.908932e-05	k: 65	n:4340000
Cons ci ratio: 2.763636e-05	ci left: 9.997703e-01	ci right 9.997982e-01	k: 4339065	n:4340000
KS ci ratio: 1.239611e+00	ci left: 9.482431e-07	ci right 3.936587e-06	k: 9	n:4340000
ZNF845   4340000 perm   7909 sec   (549 perm/sec)   p_kst 2.073733e-06   p_cons 9.997846e-01   p_joint 1.497696e-05

Joint ci ratio: 4.825149e-01	ci left: 1.153235e-05	ci right 1.904544e-05	k: 65	n:4350000
Cons ci ratio: 2.760227e-05	ci left: 9.997704e-01	ci right 9.997982e-01	k: 4349063	n:4350000
KS ci ratio: 1.239611e+00	ci left: 9.460632e-07	ci right 3.927537e-06	k: 9	n:4350000
ZNF845   4350000 perm   7944 sec   (548 perm/sec)   p_kst 2.068966e-06   p_cons 9.997846e-01   p_joint 1.494253e-05

Joint ci ratio: 4.825149e-01	ci left: 1.150590e-05	ci right 1.900176e-05	k: 65	n:4360000
Cons ci ratio: 2.759762e-05	ci left: 9.997699e-01	ci right 9.997977e-01	k: 4359059	n:4360000
KS ci ratio: 1.239611e+00	ci left: 9.438933e-07	ci right 3.918529e-06	k: 9	n:4360000
ZNF845   4360000 perm   7978 sec   (546 perm/sec)   p_kst 2.064220e-06   p_cons 9.997842e-01   p_joint 1.490826e-05

Joint ci ratio: 4.825149e-01	ci left: 1.147957e-05	ci right 1.895828e-05	k: 65	n:4370000
Cons ci ratio: 2.757828e-05	ci left: 9.997698e-01	ci right 9.997975e-01	k: 4369056	n:4370000
KS ci ratio: 1.239611e+00	ci left: 9.417334e-07	ci right 3.909562e-06	k: 9	n:4370000
ZNF845   4370000 perm   8013 sec   (545 perm/sec)   p_kst 2.059497e-06   p_cons 9.997840e-01   p_joint 1.487414e-05

Joint ci ratio: 4.825150e-01	ci left: 1.145336e-05	ci right 1.891499e-05	k: 65	n:4380000
Cons ci ratio: 2.757350e-05	ci left: 9.997693e-01	ci right 9.997971e-01	k: 4379052	n:4380000
KS ci ratio: 1.239611e+00	ci left: 9.395833e-07	ci right 3.900636e-06	k: 9	n:4380000
ZNF845   4380000 perm   8047 sec   (544 perm/sec)   p_kst 2.054795e-06   p_cons 9.997836e-01   p_joint 1.484018e-05

Joint ci ratio: 4.825150e-01	ci left: 1.142727e-05	ci right 1.887191e-05	k: 65	n:4390000
Cons ci ratio: 2.758308e-05	ci left: 9.997687e-01	ci right 9.997965e-01	k: 4389047	n:4390000
KS ci ratio: 1.239611e+00	ci left: 9.374430e-07	ci right 3.891751e-06	k: 9	n:4390000
ZNF845   4390000 perm   8082 sec   (543 perm/sec)   p_kst 2.050114e-06   p_cons 9.997829e-01   p_joint 1.480638e-05

Joint ci ratio: 4.825150e-01	ci left: 1.140130e-05	ci right 1.882902e-05	k: 65	n:4400000
Cons ci ratio: 2.762118e-05	ci left: 9.997676e-01	ci right 9.997954e-01	k: 4399040	n:4400000
KS ci ratio: 1.239611e+00	ci left: 9.353125e-07	ci right 3.882906e-06	k: 9	n:4400000
ZNF845   4400000 perm   8116 sec   (542 perm/sec)   p_kst 2.045455e-06   p_cons 9.997818e-01   p_joint 1.477273e-05

Joint ci ratio: 4.825150e-01	ci left: 1.137544e-05	ci right 1.878632e-05	k: 65	n:4410000
Cons ci ratio: 2.763016e-05	ci left: 9.997669e-01	ci right 9.997948e-01	k: 4409035	n:4410000
KS ci ratio: 1.239611e+00	ci left: 9.331916e-07	ci right 3.874102e-06	k: 9	n:4410000
ZNF845   4410000 perm   8151 sec   (541 perm/sec)   p_kst 2.040816e-06   p_cons 9.997812e-01   p_joint 1.473923e-05

Joint ci ratio: 4.753661e-01	ci left: 1.174755e-05	ci right 1.925056e-05	k: 67	n:4420000
Cons ci ratio: 2.758191e-05	ci left: 9.997672e-01	ci right 9.997950e-01	k: 4419034	n:4420000
KS ci ratio: 1.181923e+00	ci left: 1.084930e-06	ci right 4.160710e-06	k: 10	n:4420000
ZNF845   4420000 perm   8186 sec   (540 perm/sec)   p_kst 2.262443e-06   p_cons 9.997814e-01   p_joint 1.515837e-05

Joint ci ratio: 4.753661e-01	ci left: 1.172103e-05	ci right 1.920710e-05	k: 67	n:4430000
Cons ci ratio: 2.753387e-05	ci left: 9.997675e-01	ci right 9.997953e-01	k: 4429033	n:4430000
KS ci ratio: 1.181923e+00	ci left: 1.082481e-06	ci right 4.151318e-06	k: 10	n:4430000
ZNF845   4430000 perm   8220 sec   (539 perm/sec)   p_kst 2.257336e-06   p_cons 9.997817e-01   p_joint 1.512415e-05

Joint ci ratio: 4.753661e-01	ci left: 1.169463e-05	ci right 1.916384e-05	k: 67	n:4440000
Cons ci ratio: 2.748604e-05	ci left: 9.997678e-01	ci right 9.997955e-01	k: 4439032	n:4440000
KS ci ratio: 1.181923e+00	ci left: 1.080043e-06	ci right 4.141968e-06	k: 10	n:4440000
ZNF845   4440000 perm   8256 sec   (538 perm/sec)   p_kst 2.252252e-06   p_cons 9.997820e-01   p_joint 1.509009e-05

Joint ci ratio: 4.753661e-01	ci left: 1.166835e-05	ci right 1.912078e-05	k: 67	n:4450000
Cons ci ratio: 2.743841e-05	ci left: 9.997681e-01	ci right 9.997957e-01	k: 4449031	n:4450000
KS ci ratio: 1.181923e+00	ci left: 1.077616e-06	ci right 4.132660e-06	k: 10	n:4450000
ZNF845   4450000 perm   8291 sec   (537 perm/sec)   p_kst 2.247191e-06   p_cons 9.997822e-01   p_joint 1.505618e-05

Joint ci ratio: 4.719088e-01	ci left: 1.183963e-05	ci right 1.932871e-05	k: 68	n:4460000
Cons ci ratio: 2.739100e-05	ci left: 9.997684e-01	ci right 9.997960e-01	k: 4459030	n:4460000
KS ci ratio: 1.181923e+00	ci left: 1.075200e-06	ci right 4.123394e-06	k: 10	n:4460000
ZNF845   4460000 perm   8327 sec   (536 perm/sec)   p_kst 2.242152e-06   p_cons 9.997825e-01   p_joint 1.524664e-05

Joint ci ratio: 4.719088e-01	ci left: 1.181314e-05	ci right 1.928546e-05	k: 68	n:4470000
Cons ci ratio: 2.737191e-05	ci left: 9.997682e-01	ci right 9.997958e-01	k: 4469027	n:4470000
KS ci ratio: 1.181923e+00	ci left: 1.072794e-06	ci right 4.114170e-06	k: 10	n:4470000
ZNF845   4470000 perm   8363 sec   (535 perm/sec)   p_kst 2.237136e-06   p_cons 9.997823e-01   p_joint 1.521253e-05

Joint ci ratio: 4.719089e-01	ci left: 1.178677e-05	ci right 1.924242e-05	k: 68	n:4480000
Cons ci ratio: 2.732482e-05	ci left: 9.997685e-01	ci right 9.997960e-01	k: 4479026	n:4480000
KS ci ratio: 1.181923e+00	ci left: 1.070400e-06	ci right 4.104986e-06	k: 10	n:4480000
ZNF845   4480000 perm   8398 sec   (533 perm/sec)   p_kst 2.232143e-06   p_cons 9.997826e-01   p_joint 1.517857e-05

Joint ci ratio: 4.719089e-01	ci left: 1.176052e-05	ci right 1.919956e-05	k: 68	n:4490000
Cons ci ratio: 2.727794e-05	ci left: 9.997688e-01	ci right 9.997963e-01	k: 4489025	n:4490000
KS ci ratio: 1.181923e+00	ci left: 1.068016e-06	ci right 4.095844e-06	k: 10	n:4490000
ZNF845   4490000 perm   8435 sec   (532 perm/sec)   p_kst 2.227171e-06   p_cons 9.997829e-01   p_joint 1.514477e-05

Joint ci ratio: 4.719089e-01	ci left: 1.173439e-05	ci right 1.915690e-05	k: 68	n:4500000
Cons ci ratio: 2.724520e-05	ci left: 9.997688e-01	ci right 9.997963e-01	k: 4499023	n:4500000
KS ci ratio: 1.181923e+00	ci left: 1.065642e-06	ci right 4.086742e-06	k: 10	n:4500000
ZNF845   4500000 perm   8469 sec   (531 perm/sec)   p_kst 2.222222e-06   p_cons 9.997829e-01   p_joint 1.511111e-05

Joint ci ratio: 4.719089e-01	ci left: 1.170837e-05	ci right 1.911442e-05	k: 68	n:4510000
Cons ci ratio: 2.718478e-05	ci left: 9.997694e-01	ci right 9.997967e-01	k: 4509023	n:4510000
KS ci ratio: 1.181923e+00	ci left: 1.063280e-06	ci right 4.077680e-06	k: 10	n:4510000
ZNF845   4510000 perm   8505 sec   (530 perm/sec)   p_kst 2.217295e-06   p_cons 9.997834e-01   p_joint 1.507761e-05

Joint ci ratio: 4.719089e-01	ci left: 1.168247e-05	ci right 1.907213e-05	k: 68	n:4520000
Cons ci ratio: 2.715236e-05	ci left: 9.997694e-01	ci right 9.997968e-01	k: 4519021	n:4520000
KS ci ratio: 1.181923e+00	ci left: 1.060927e-06	ci right 4.068659e-06	k: 10	n:4520000
ZNF845   4520000 perm   8541 sec   (529 perm/sec)   p_kst 2.212389e-06   p_cons 9.997834e-01   p_joint 1.504425e-05

Joint ci ratio: 4.719089e-01	ci left: 1.165668e-05	ci right 1.903003e-05	k: 68	n:4530000
Cons ci ratio: 2.714766e-05	ci left: 9.997690e-01	ci right 9.997964e-01	k: 4529017	n:4530000
KS ci ratio: 1.181923e+00	ci left: 1.058585e-06	ci right 4.059677e-06	k: 10	n:4530000
ZNF845   4530000 perm   8576 sec   (528 perm/sec)   p_kst 2.207506e-06   p_cons 9.997830e-01   p_joint 1.501104e-05

Joint ci ratio: 4.719089e-01	ci left: 1.163100e-05	ci right 1.898811e-05	k: 68	n:4540000
Cons ci ratio: 2.711537e-05	ci left: 9.997691e-01	ci right 9.997964e-01	k: 4539015	n:4540000
KS ci ratio: 1.181923e+00	ci left: 1.056254e-06	ci right 4.050735e-06	k: 10	n:4540000
ZNF845   4540000 perm   8611 sec   (527 perm/sec)   p_kst 2.202643e-06   p_cons 9.997830e-01   p_joint 1.497797e-05

Joint ci ratio: 4.719089e-01	ci left: 1.160544e-05	ci right 1.894638e-05	k: 68	n:4550000
Cons ci ratio: 2.709691e-05	ci left: 9.997689e-01	ci right 9.997962e-01	k: 4549012	n:4550000
KS ci ratio: 1.181923e+00	ci left: 1.053932e-06	ci right 4.041833e-06	k: 10	n:4550000
ZNF845   4550000 perm   8647 sec   (526 perm/sec)   p_kst 2.197802e-06   p_cons 9.997829e-01   p_joint 1.494505e-05

Joint ci ratio: 4.719089e-01	ci left: 1.157999e-05	ci right 1.890483e-05	k: 68	n:4560000
Cons ci ratio: 2.711939e-05	ci left: 9.997680e-01	ci right 9.997954e-01	k: 4559006	n:4560000
KS ci ratio: 1.181923e+00	ci left: 1.051621e-06	ci right 4.032969e-06	k: 10	n:4560000
ZNF845   4560000 perm   8684 sec   (525 perm/sec)   p_kst 2.192982e-06   p_cons 9.997820e-01   p_joint 1.491228e-05

Joint ci ratio: 4.719089e-01	ci left: 1.155465e-05	ci right 1.886346e-05	k: 68	n:4570000
Cons ci ratio: 2.710081e-05	ci left: 9.997679e-01	ci right 9.997952e-01	k: 4569003	n:4570000
KS ci ratio: 1.181923e+00	ci left: 1.049320e-06	ci right 4.024144e-06	k: 10	n:4570000
ZNF845   4570000 perm   8719 sec   (524 perm/sec)   p_kst 2.188184e-06   p_cons 9.997818e-01   p_joint 1.487965e-05

Joint ci ratio: 4.719089e-01	ci left: 1.152942e-05	ci right 1.882228e-05	k: 68	n:4580000
Cons ci ratio: 2.706872e-05	ci left: 9.997679e-01	ci right 9.997952e-01	k: 4579001	n:4580000
KS ci ratio: 1.181923e+00	ci left: 1.047029e-06	ci right 4.015358e-06	k: 10	n:4580000
ZNF845   4580000 perm   8755 sec   (523 perm/sec)   p_kst 2.183406e-06   p_cons 9.997819e-01   p_joint 1.484716e-05

Joint ci ratio: 4.719089e-01	ci left: 1.150430e-05	ci right 1.878127e-05	k: 68	n:4590000
Cons ci ratio: 2.707720e-05	ci left: 9.997673e-01	ci right 9.997946e-01	k: 4588996	n:4590000
KS ci ratio: 1.181923e+00	ci left: 1.044747e-06	ci right 4.006610e-06	k: 10	n:4590000
ZNF845   4590000 perm   8791 sec   (522 perm/sec)   p_kst 2.178649e-06   p_cons 9.997813e-01   p_joint 1.481481e-05

Joint ci ratio: 4.719090e-01	ci left: 1.147929e-05	ci right 1.874044e-05	k: 68	n:4600000
Cons ci ratio: 2.703177e-05	ci left: 9.997676e-01	ci right 9.997948e-01	k: 4598995	n:4600000
KS ci ratio: 1.181923e+00	ci left: 1.042476e-06	ci right 3.997900e-06	k: 10	n:4600000
ZNF845   4600000 perm   8827 sec   (521 perm/sec)   p_kst 2.173913e-06   p_cons 9.997815e-01   p_joint 1.478261e-05

Joint ci ratio: 4.719090e-01	ci left: 1.145439e-05	ci right 1.869979e-05	k: 68	n:4610000
Cons ci ratio: 2.702671e-05	ci left: 9.997672e-01	ci right 9.997944e-01	k: 4608991	n:4610000
KS ci ratio: 1.181923e+00	ci left: 1.040215e-06	ci right 3.989228e-06	k: 10	n:4610000
ZNF845   4610000 perm   8864 sec   (520 perm/sec)   p_kst 2.169197e-06   p_cons 9.997811e-01   p_joint 1.475054e-05

Joint ci ratio: 4.685260e-01	ci left: 1.162039e-05	ci right 1.890124e-05	k: 69	n:4620000
Cons ci ratio: 2.698155e-05	ci left: 9.997675e-01	ci right 9.997947e-01	k: 4618990	n:4620000
KS ci ratio: 1.181923e+00	ci left: 1.037963e-06	ci right 3.980593e-06	k: 10	n:4620000
ZNF845   4620000 perm   8903 sec   (519 perm/sec)   p_kst 2.164502e-06   p_cons 9.997814e-01   p_joint 1.493506e-05

Joint ci ratio: 4.685260e-01	ci left: 1.159529e-05	ci right 1.886042e-05	k: 69	n:4630000
Cons ci ratio: 2.694990e-05	ci left: 9.997675e-01	ci right 9.997947e-01	k: 4628988	n:4630000
KS ci ratio: 1.181923e+00	ci left: 1.035722e-06	ci right 3.971996e-06	k: 10	n:4630000
ZNF845   4630000 perm   8941 sec   (518 perm/sec)   p_kst 2.159827e-06   p_cons 9.997814e-01   p_joint 1.490281e-05

Joint ci ratio: 4.685260e-01	ci left: 1.157030e-05	ci right 1.881977e-05	k: 69	n:4640000
Cons ci ratio: 2.690508e-05	ci left: 9.997678e-01	ci right 9.997949e-01	k: 4638987	n:4640000
KS ci ratio: 1.181923e+00	ci left: 1.033489e-06	ci right 3.963435e-06	k: 10	n:4640000
ZNF845   4640000 perm   8978 sec   (517 perm/sec)   p_kst 2.155172e-06   p_cons 9.997817e-01   p_joint 1.487069e-05

Joint ci ratio: 4.685260e-01	ci left: 1.154542e-05	ci right 1.877930e-05	k: 69	n:4650000
Cons ci ratio: 2.687368e-05	ci left: 9.997679e-01	ci right 9.997949e-01	k: 4648985	n:4650000
KS ci ratio: 1.181923e+00	ci left: 1.031267e-06	ci right 3.954912e-06	k: 10	n:4650000
ZNF845   4650000 perm   9014 sec   (516 perm/sec)   p_kst 2.150538e-06   p_cons 9.997817e-01   p_joint 1.483871e-05

Joint ci ratio: 4.685260e-01	ci left: 1.152064e-05	ci right 1.873900e-05	k: 69	n:4660000
Cons ci ratio: 2.688193e-05	ci left: 9.997673e-01	ci right 9.997943e-01	k: 4658980	n:4660000
KS ci ratio: 1.181923e+00	ci left: 1.029054e-06	ci right 3.946425e-06	k: 10	n:4660000
ZNF845   4660000 perm   9051 sec   (515 perm/sec)   p_kst 2.145923e-06   p_cons 9.997811e-01   p_joint 1.480687e-05

Joint ci ratio: 4.685261e-01	ci left: 1.149597e-05	ci right 1.869887e-05	k: 69	n:4670000
Cons ci ratio: 2.683749e-05	ci left: 9.997675e-01	ci right 9.997946e-01	k: 4668979	n:4670000
KS ci ratio: 1.181923e+00	ci left: 1.026850e-06	ci right 3.937974e-06	k: 10	n:4670000
ZNF845   4670000 perm   9089 sec   (514 perm/sec)   p_kst 2.141328e-06   p_cons 9.997814e-01   p_joint 1.477516e-05

Joint ci ratio: 4.685261e-01	ci left: 1.147141e-05	ci right 1.865892e-05	k: 69	n:4680000
Cons ci ratio: 2.685865e-05	ci left: 9.997667e-01	ci right 9.997938e-01	k: 4678973	n:4680000
KS ci ratio: 1.181923e+00	ci left: 1.024656e-06	ci right 3.929560e-06	k: 10	n:4680000
ZNF845   4680000 perm   9126 sec   (513 perm/sec)   p_kst 2.136752e-06   p_cons 9.997806e-01   p_joint 1.474359e-05

Joint ci ratio: 4.685261e-01	ci left: 1.144695e-05	ci right 1.861914e-05	k: 69	n:4690000
Cons ci ratio: 2.681442e-05	ci left: 9.997670e-01	ci right 9.997940e-01	k: 4688972	n:4690000
KS ci ratio: 1.181923e+00	ci left: 1.022471e-06	ci right 3.921181e-06	k: 10	n:4690000
ZNF845   4690000 perm   9163 sec   (512 perm/sec)   p_kst 2.132196e-06   p_cons 9.997808e-01   p_joint 1.471215e-05

Joint ci ratio: 4.652148e-01	ci left: 1.161032e-05	ci right 1.881715e-05	k: 70	n:4700000
Cons ci ratio: 2.675736e-05	ci left: 9.997675e-01	ci right 9.997944e-01	k: 4698972	n:4700000
KS ci ratio: 1.181923e+00	ci left: 1.020296e-06	ci right 3.912838e-06	k: 10	n:4700000
ZNF845   4700000 perm   9200 sec   (511 perm/sec)   p_kst 2.127660e-06   p_cons 9.997813e-01   p_joint 1.489362e-05

Joint ci ratio: 4.652149e-01	ci left: 1.158567e-05	ci right 1.877720e-05	k: 70	n:4710000
Cons ci ratio: 2.672648e-05	ci left: 9.997675e-01	ci right 9.997945e-01	k: 4708970	n:4710000
KS ci ratio: 1.181923e+00	ci left: 1.018130e-06	ci right 3.904531e-06	k: 10	n:4710000
ZNF845   4710000 perm   9237 sec   (510 perm/sec)   p_kst 2.123142e-06   p_cons 9.997813e-01   p_joint 1.486200e-05

Joint ci ratio: 4.652149e-01	ci left: 1.156113e-05	ci right 1.873742e-05	k: 70	n:4720000
Cons ci ratio: 2.668279e-05	ci left: 9.997678e-01	ci right 9.997947e-01	k: 4718969	n:4720000
KS ci ratio: 1.181923e+00	ci left: 1.015973e-06	ci right 3.896258e-06	k: 10	n:4720000
ZNF845   4720000 perm   9274 sec   (509 perm/sec)   p_kst 2.118644e-06   p_cons 9.997816e-01   p_joint 1.483051e-05

Joint ci ratio: 4.652149e-01	ci left: 1.153668e-05	ci right 1.869780e-05	k: 70	n:4730000
Cons ci ratio: 2.663927e-05	ci left: 9.997681e-01	ci right 9.997949e-01	k: 4728968	n:4730000
KS ci ratio: 1.181923e+00	ci left: 1.013825e-06	ci right 3.888021e-06	k: 10	n:4730000
ZNF845   4730000 perm   9312 sec   (508 perm/sec)   p_kst 2.114165e-06   p_cons 9.997818e-01   p_joint 1.479915e-05

Joint ci ratio: 4.652149e-01	ci left: 1.151235e-05	ci right 1.865836e-05	k: 70	n:4740000
Cons ci ratio: 2.662164e-05	ci left: 9.997679e-01	ci right 9.997947e-01	k: 4738965	n:4740000
KS ci ratio: 1.181923e+00	ci left: 1.011686e-06	ci right 3.879819e-06	k: 10	n:4740000
ZNF845   4740000 perm   9349 sec   (507 perm/sec)   p_kst 2.109705e-06   p_cons 9.997816e-01   p_joint 1.476793e-05

Joint ci ratio: 4.652149e-01	ci left: 1.148811e-05	ci right 1.861908e-05	k: 70	n:4750000
Cons ci ratio: 2.660403e-05	ci left: 9.997678e-01	ci right 9.997946e-01	k: 4748962	n:4750000
KS ci ratio: 1.181923e+00	ci left: 1.009556e-06	ci right 3.871650e-06	k: 10	n:4750000
ZNF845   4750000 perm   9387 sec   (506 perm/sec)   p_kst 2.105263e-06   p_cons 9.997815e-01   p_joint 1.473684e-05

Joint ci ratio: 4.652149e-01	ci left: 1.146397e-05	ci right 1.857996e-05	k: 70	n:4760000
Cons ci ratio: 2.657368e-05	ci left: 9.997678e-01	ci right 9.997946e-01	k: 4758960	n:4760000
KS ci ratio: 1.181923e+00	ci left: 1.007435e-06	ci right 3.863517e-06	k: 10	n:4760000
ZNF845   4760000 perm   9424 sec   (505 perm/sec)   p_kst 2.100840e-06   p_cons 9.997815e-01   p_joint 1.470588e-05

Joint ci ratio: 4.652149e-01	ci left: 1.143994e-05	ci right 1.854101e-05	k: 70	n:4770000
Cons ci ratio: 2.653070e-05	ci left: 9.997681e-01	ci right 9.997948e-01	k: 4768959	n:4770000
KS ci ratio: 1.181923e+00	ci left: 1.005323e-06	ci right 3.855417e-06	k: 10	n:4770000
ZNF845   4770000 perm   9462 sec   (504 perm/sec)   p_kst 2.096436e-06   p_cons 9.997818e-01   p_joint 1.467505e-05

Joint ci ratio: 4.652149e-01	ci left: 1.141601e-05	ci right 1.850222e-05	k: 70	n:4780000
Cons ci ratio: 2.651329e-05	ci left: 9.997679e-01	ci right 9.997946e-01	k: 4778956	n:4780000
KS ci ratio: 1.181923e+00	ci left: 1.003220e-06	ci right 3.847351e-06	k: 10	n:4780000
ZNF845   4780000 perm   9501 sec   (503 perm/sec)   p_kst 2.092050e-06   p_cons 9.997816e-01   p_joint 1.464435e-05

Joint ci ratio: 4.652149e-01	ci left: 1.139217e-05	ci right 1.846359e-05	k: 70	n:4790000
Cons ci ratio: 2.647059e-05	ci left: 9.997682e-01	ci right 9.997949e-01	k: 4788955	n:4790000
KS ci ratio: 1.181923e+00	ci left: 1.001125e-06	ci right 3.839319e-06	k: 10	n:4790000
ZNF845   4790000 perm   9538 sec   (502 perm/sec)   p_kst 2.087683e-06   p_cons 9.997818e-01   p_joint 1.461378e-05

Joint ci ratio: 4.652149e-01	ci left: 1.136844e-05	ci right 1.842513e-05	k: 70	n:4800000
Cons ci ratio: 2.642806e-05	ci left: 9.997685e-01	ci right 9.997951e-01	k: 4798954	n:4800000
KS ci ratio: 1.181923e+00	ci left: 9.990397e-07	ci right 3.831321e-06	k: 10	n:4800000
ZNF845   4800000 perm   9576 sec   (501 perm/sec)   p_kst 2.083333e-06   p_cons 9.997821e-01   p_joint 1.458333e-05

Joint ci ratio: 4.652149e-01	ci left: 1.134481e-05	ci right 1.838682e-05	k: 70	n:4810000
Cons ci ratio: 2.641088e-05	ci left: 9.997683e-01	ci right 9.997949e-01	k: 4808951	n:4810000
KS ci ratio: 1.181923e+00	ci left: 9.969627e-07	ci right 3.823356e-06	k: 10	n:4810000
ZNF845   4810000 perm   9614 sec   (500 perm/sec)   p_kst 2.079002e-06   p_cons 9.997819e-01   p_joint 1.455301e-05

Joint ci ratio: 4.652149e-01	ci left: 1.132127e-05	ci right 1.834868e-05	k: 70	n:4820000
Cons ci ratio: 2.639371e-05	ci left: 9.997681e-01	ci right 9.997947e-01	k: 4818948	n:4820000
KS ci ratio: 1.181923e+00	ci left: 9.948944e-07	ci right 3.815423e-06	k: 10	n:4820000
ZNF845   4820000 perm   9652 sec   (499 perm/sec)   p_kst 2.074689e-06   p_cons 9.997817e-01   p_joint 1.452282e-05

Joint ci ratio: 4.652149e-01	ci left: 1.129783e-05	ci right 1.831069e-05	k: 70	n:4830000
Cons ci ratio: 2.640153e-05	ci left: 9.997676e-01	ci right 9.997942e-01	k: 4828943	n:4830000
KS ci ratio: 1.181923e+00	ci left: 9.928345e-07	ci right 3.807524e-06	k: 10	n:4830000
ZNF845   4830000 perm   9690 sec   (498 perm/sec)   p_kst 2.070393e-06   p_cons 9.997812e-01   p_joint 1.449275e-05

Joint ci ratio: 4.652149e-01	ci left: 1.127449e-05	ci right 1.827286e-05	k: 70	n:4840000
Cons ci ratio: 2.638431e-05	ci left: 9.997674e-01	ci right 9.997940e-01	k: 4838940	n:4840000
KS ci ratio: 1.181923e+00	ci left: 9.907832e-07	ci right 3.799657e-06	k: 10	n:4840000
ZNF845   4840000 perm   9729 sec   (497 perm/sec)   p_kst 2.066116e-06   p_cons 9.997810e-01   p_joint 1.446281e-05

Joint ci ratio: 4.652150e-01	ci left: 1.125124e-05	ci right 1.823518e-05	k: 70	n:4850000
Cons ci ratio: 2.632991e-05	ci left: 9.997679e-01	ci right 9.997944e-01	k: 4848940	n:4850000
KS ci ratio: 1.181923e+00	ci left: 9.887404e-07	ci right 3.791823e-06	k: 10	n:4850000
ZNF845   4850000 perm   9766 sec   (497 perm/sec)   p_kst 2.061856e-06   p_cons 9.997814e-01   p_joint 1.443299e-05

Joint ci ratio: 4.652150e-01	ci left: 1.122809e-05	ci right 1.819766e-05	k: 70	n:4860000
Cons ci ratio: 2.631285e-05	ci left: 9.997677e-01	ci right 9.997942e-01	k: 4858937	n:4860000
KS ci ratio: 1.181923e+00	ci left: 9.867059e-07	ci right 3.784021e-06	k: 10	n:4860000
ZNF845   4860000 perm   9803 sec   (496 perm/sec)   p_kst 2.057613e-06   p_cons 9.997813e-01   p_joint 1.440329e-05

Joint ci ratio: 4.652150e-01	ci left: 1.120503e-05	ci right 1.816029e-05	k: 70	n:4870000
Cons ci ratio: 2.627116e-05	ci left: 9.997680e-01	ci right 9.997945e-01	k: 4868936	n:4870000
KS ci ratio: 1.181923e+00	ci left: 9.846798e-07	ci right 3.776251e-06	k: 10	n:4870000
ZNF845   4870000 perm   9842 sec   (495 perm/sec)   p_kst 2.053388e-06   p_cons 9.997815e-01   p_joint 1.437372e-05

Joint ci ratio: 4.652150e-01	ci left: 1.118207e-05	ci right 1.812308e-05	k: 70	n:4880000
Cons ci ratio: 2.621732e-05	ci left: 9.997685e-01	ci right 9.997949e-01	k: 4878936	n:4880000
KS ci ratio: 1.181923e+00	ci left: 9.826620e-07	ci right 3.768512e-06	k: 10	n:4880000
ZNF845   4880000 perm   9880 sec   (494 perm/sec)   p_kst 2.049180e-06   p_cons 9.997820e-01   p_joint 1.434426e-05

Joint ci ratio: 4.652150e-01	ci left: 1.115921e-05	ci right 1.808602e-05	k: 70	n:4890000
Cons ci ratio: 2.616370e-05	ci left: 9.997689e-01	ci right 9.997953e-01	k: 4888936	n:4890000
KS ci ratio: 1.181923e+00	ci left: 9.806525e-07	ci right 3.760806e-06	k: 10	n:4890000
ZNF845   4890000 perm   9919 sec   (493 perm/sec)   p_kst 2.044990e-06   p_cons 9.997824e-01   p_joint 1.431493e-05

Joint ci ratio: 4.652150e-01	ci left: 1.113643e-05	ci right 1.804911e-05	k: 70	n:4900000
Cons ci ratio: 2.615929e-05	ci left: 9.997686e-01	ci right 9.997949e-01	k: 4898932	n:4900000
KS ci ratio: 1.181923e+00	ci left: 9.786512e-07	ci right 3.753131e-06	k: 10	n:4900000
ZNF845   4900000 perm   9957 sec   (492 perm/sec)   p_kst 2.040816e-06   p_cons 9.997820e-01   p_joint 1.428571e-05

Joint ci ratio: 4.652150e-01	ci left: 1.111375e-05	ci right 1.801235e-05	k: 70	n:4910000
Cons ci ratio: 2.614262e-05	ci left: 9.997684e-01	ci right 9.997947e-01	k: 4908929	n:4910000
KS ci ratio: 1.181923e+00	ci left: 9.766580e-07	ci right 3.745487e-06	k: 10	n:4910000
ZNF845   4910000 perm   9996 sec   (491 perm/sec)   p_kst 2.036660e-06   p_cons 9.997819e-01   p_joint 1.425662e-05

Joint ci ratio: 4.652150e-01	ci left: 1.109116e-05	ci right 1.797574e-05	k: 70	n:4920000
Cons ci ratio: 2.608948e-05	ci left: 9.997689e-01	ci right 9.997952e-01	k: 4918929	n:4920000
KS ci ratio: 1.181923e+00	ci left: 9.746729e-07	ci right 3.737874e-06	k: 10	n:4920000
ZNF845   4920000 perm   10035 sec   (490 perm/sec)   p_kst 2.032520e-06   p_cons 9.997823e-01   p_joint 1.422764e-05

Joint ci ratio: 4.382657e-01	ci left: 1.268664e-05	ci right 1.997107e-05	k: 79	n:4930000
Cons ci ratio: 2.607297e-05	ci left: 9.997687e-01	ci right 9.997950e-01	k: 4928926	n:4930000
KS ci ratio: 1.181923e+00	ci left: 9.726959e-07	ci right 3.730292e-06	k: 10	n:4930000
ZNF845   4930000 perm   10073 sec   (489 perm/sec)   p_kst 2.028398e-06   p_cons 9.997822e-01   p_joint 1.602434e-05

Joint ci ratio: 4.382657e-01	ci left: 1.266096e-05	ci right 1.993064e-05	k: 79	n:4940000
Cons ci ratio: 2.605648e-05	ci left: 9.997686e-01	ci right 9.997948e-01	k: 4938923	n:4940000
KS ci ratio: 1.181923e+00	ci left: 9.707269e-07	ci right 3.722741e-06	k: 10	n:4940000
ZNF845   4940000 perm   10111 sec   (489 perm/sec)   p_kst 2.024291e-06   p_cons 9.997820e-01   p_joint 1.599190e-05

Joint ci ratio: 4.382657e-01	ci left: 1.263538e-05	ci right 1.989038e-05	k: 79	n:4950000
Cons ci ratio: 2.601589e-05	ci left: 9.997688e-01	ci right 9.997950e-01	k: 4948922	n:4950000
KS ci ratio: 1.181923e+00	ci left: 9.687658e-07	ci right 3.715220e-06	k: 10	n:4950000
ZNF845   4950000 perm   10150 sec   (488 perm/sec)   p_kst 2.020202e-06   p_cons 9.997822e-01   p_joint 1.595960e-05

Joint ci ratio: 4.382657e-01	ci left: 1.260991e-05	ci right 1.985028e-05	k: 79	n:4960000
Cons ci ratio: 2.601153e-05	ci left: 9.997685e-01	ci right 9.997947e-01	k: 4958918	n:4960000
KS ci ratio: 1.181923e+00	ci left: 9.668126e-07	ci right 3.707730e-06	k: 10	n:4960000
ZNF845   4960000 perm   10189 sec   (487 perm/sec)   p_kst 2.016129e-06   p_cons 9.997819e-01   p_joint 1.592742e-05

Joint ci ratio: 4.355520e-01	ci left: 1.276361e-05	ci right 2.003355e-05	k: 80	n:4970000
Cons ci ratio: 2.600709e-05	ci left: 9.997681e-01	ci right 9.997943e-01	k: 4968914	n:4970000
KS ci ratio: 1.181923e+00	ci left: 9.648673e-07	ci right 3.700270e-06	k: 10	n:4970000
ZNF845   4970000 perm   10228 sec   (486 perm/sec)   p_kst 2.012072e-06   p_cons 9.997815e-01   p_joint 1.609658e-05

Joint ci ratio: 4.328880e-01	ci left: 1.291683e-05	ci right 2.021594e-05	k: 81	n:4980000
Cons ci ratio: 2.596680e-05	ci left: 9.997684e-01	ci right 9.997945e-01	k: 4978913	n:4980000
KS ci ratio: 1.181923e+00	ci left: 9.629299e-07	ci right 3.692839e-06	k: 10	n:4980000
ZNF845   4980000 perm   10267 sec   (485 perm/sec)   p_kst 2.008032e-06   p_cons 9.997817e-01   p_joint 1.626506e-05

Joint ci ratio: 4.328880e-01	ci left: 1.289094e-05	ci right 2.017543e-05	k: 81	n:4990000
Cons ci ratio: 2.592666e-05	ci left: 9.997686e-01	ci right 9.997947e-01	k: 4988912	n:4990000
KS ci ratio: 1.181923e+00	ci left: 9.610001e-07	ci right 3.685439e-06	k: 10	n:4990000
ZNF845   4990000 perm   10307 sec   (484 perm/sec)   p_kst 2.004008e-06   p_cons 9.997820e-01   p_joint 1.623246e-05

Joint ci ratio: 4.496514e-01	ci left: 1.179847e-05	ci right 1.880259e-05	k: 75	n:5000000
Cons ci ratio: 2.592229e-05	ci left: 9.997683e-01	ci right 9.997944e-01	k: 4998908	n:5000000
KS ci ratio: 1.181923e+00	ci left: 9.590781e-07	ci right 3.678068e-06	k: 10	n:5000000
ZNF845   5000000 perm   10346 sec   (483 perm/sec)   p_kst 2.000000e-06   p_cons 9.997816e-01   p_joint 1.500000e-05

Outputting figure to mutsig2_images.part000000000200/ZNF845.6_2925_5000000_2e-06_0.99978_1.5e-05.png
                gene_name: ZNF845
               theta_stop: 1.2 
                    nperm: 5000000 
                     p_ks: 2.00e-06 
        ci_ks_bounds_left: 9.59e-07 
       ci_ks_bounds_right: 3.68e-06 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1.50e-05 
     ci_joint_bounds_left: 1.18e-05 
    ci_joint_bounds_right: 1.88e-05 

Current progress: 12 percent done.
ZNF878
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.209154e-01	ci left: 1.234131e-02	ci right 1.714746e-02	k: 146	n:10000
Cons ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
KS ci ratio: 2.771443e+00	ci left: 2.531778e-06	ci right 5.570370e-04	k: 1	n:10000
ZNF878   10000 perm   2 sec   (5838 perm/sec)   p_kst 1.000000e-04   p_cons 1   p_joint 1.460000e-02

Joint ci ratio: 3.039027e-01	ci left: 6.997074e-03	ci right 9.548992e-03	k: 164	n:20000
Cons ci ratio: 1.959804e-04	ci left: 9.998156e-01	ci right 1	k: 20000	n:20000
KS ci ratio: 2.771651e+00	ci left: 1.265890e-06	ci right 2.785503e-04	k: 1	n:20000
ZNF878   20000 perm   4 sec   (5632 perm/sec)   p_kst 5.000000e-05   p_cons 1   p_joint 8.200000e-03

Joint ci ratio: 3.110310e-01	ci left: 4.448416e-03	ci right 6.116268e-03	k: 157	n:30000
Cons ci ratio: 1.306580e-04	ci left: 9.998770e-01	ci right 1	k: 30000	n:30000
KS ci ratio: 2.771720e+00	ci left: 8.439266e-07	ci right 1.857073e-04	k: 1	n:30000
ZNF878   30000 perm   5 sec   (5490 perm/sec)   p_kst 3.333333e-05   p_cons 1   p_joint 5.233333e-03

Joint ci ratio: 3.715487e-01	ci left: 2.260691e-03	ci right 3.313558e-03	k: 110	n:40000
Cons ci ratio: 9.799510e-05	ci left: 9.999078e-01	ci right 1	k: 40000	n:40000
KS ci ratio: 2.771755e+00	ci left: 6.329450e-07	ci right 1.392831e-04	k: 1	n:40000
ZNF878   40000 perm   7 sec   (5377 perm/sec)   p_kst 2.500000e-05   p_cons 1   p_joint 2.750000e-03

Joint ci ratio: 3.619763e-01	ci left: 1.917428e-03	ci right 2.781975e-03	k: 116	n:50000
Cons ci ratio: 7.839686e-05	ci left: 9.999262e-01	ci right 1	k: 50000	n:50000
KS ci ratio: 2.771775e+00	ci left: 5.063560e-07	ci right 1.114278e-04	k: 1	n:50000
ZNF878   50000 perm   9 sec   (5263 perm/sec)   p_kst 2.000000e-05   p_cons 1   p_joint 2.320000e-03

Joint ci ratio: 3.916699e-01	ci left: 1.341235e-03	ci right 2.008455e-03	k: 99	n:60000
Cons ci ratio: 6.533116e-05	ci left: 9.999385e-01	ci right 1	k: 60000	n:60000
KS ci ratio: 2.771789e+00	ci left: 4.219634e-07	ci right 9.285719e-05	k: 1	n:60000
ZNF878   60000 perm   12 sec   (5160 perm/sec)   p_kst 1.666667e-05   p_cons 1   p_joint 1.650000e-03

Joint ci ratio: 3.321574e-01	ci left: 1.656491e-03	ci right 2.328722e-03	k: 138	n:70000
Cons ci ratio: 5.599840e-05	ci left: 9.999473e-01	ci right 1	k: 70000	n:70000
KS ci ratio: 2.771799e+00	ci left: 3.616829e-07	ci right 7.959231e-05	k: 1	n:70000
ZNF878   70000 perm   14 sec   (5064 perm/sec)   p_kst 1.428571e-05   p_cons 1   p_joint 1.971429e-03

Joint ci ratio: 3.752097e-01	ci left: 1.107559e-03	ci right 1.629681e-03	k: 108	n:80000
Cons ci ratio: 4.899878e-05	ci left: 9.999539e-01	ci right 1	k: 80000	n:80000
KS ci ratio: 2.771807e+00	ci left: 3.164725e-07	ci right 6.964355e-05	k: 1	n:80000
ZNF878   80000 perm   16 sec   (4911 perm/sec)   p_kst 1.250000e-05   p_cons 1   p_joint 1.350000e-03

Joint ci ratio: 3.998677e-01	ci left: 8.540888e-04	ci right 1.290210e-03	k: 95	n:90000
Cons ci ratio: 4.355459e-05	ci left: 9.999590e-01	ci right 1	k: 90000	n:90000
KS ci ratio: 2.263163e+00	ci left: 2.691226e-06	ci right 8.027198e-05	k: 2	n:90000
ZNF878   90000 perm   19 sec   (4832 perm/sec)   p_kst 2.222222e-05   p_cons 1   p_joint 1.055556e-03

Joint ci ratio: 3.718615e-01	ci left: 9.041503e-04	ci right 1.325648e-03	k: 110	n:100000
Cons ci ratio: 3.919922e-05	ci left: 9.999631e-01	ci right 1	k: 100000	n:100000
KS ci ratio: 2.771817e+00	ci left: 2.531780e-07	ci right 5.571516e-05	k: 1	n:100000
ZNF878   100000 perm   21 sec   (4750 perm/sec)   p_kst 1.000000e-05   p_cons 1   p_joint 1.100000e-03

Joint ci ratio: 3.576485e-01	ci left: 8.962758e-04	ci right 1.294419e-03	k: 119	n:110000
Cons ci ratio: 3.563572e-05	ci left: 9.999665e-01	ci right 1	k: 110000	n:110000
KS ci ratio: 2.771821e+00	ci left: 2.301619e-07	ci right 5.065025e-05	k: 1	n:110000
ZNF878   110000 perm   24 sec   (4675 perm/sec)   p_kst 9.090909e-06   p_cons 1   p_joint 1.081818e-03

Joint ci ratio: 3.462960e-01	ci left: 8.823588e-04	ci right 1.259089e-03	k: 127	n:120000
Cons ci ratio: 3.266612e-05	ci left: 9.999693e-01	ci right 1	k: 120000	n:120000
KS ci ratio: 2.771824e+00	ci left: 2.109817e-07	ci right 4.642948e-05	k: 1	n:120000
ZNF878   120000 perm   26 sec   (4597 perm/sec)   p_kst 8.333333e-06   p_cons 1   p_joint 1.058333e-03

Joint ci ratio: 4.250430e-01	ci left: 5.154293e-04	ci right 7.999209e-04	k: 84	n:130000
Cons ci ratio: 3.015338e-05	ci left: 9.999716e-01	ci right 1	k: 130000	n:130000
KS ci ratio: 2.771827e+00	ci left: 1.947524e-07	ci right 4.285804e-05	k: 1	n:130000
ZNF878   130000 perm   29 sec   (4520 perm/sec)   p_kst 7.692308e-06   p_cons 1   p_joint 6.461538e-04

Joint ci ratio: 4.225731e-01	ci left: 4.849920e-04	ci right 7.506876e-04	k: 85	n:140000
Cons ci ratio: 2.799960e-05	ci left: 9.999737e-01	ci right 1	k: 140000	n:140000
KS ci ratio: 2.771829e+00	ci left: 1.808415e-07	ci right 3.979680e-05	k: 1	n:140000
ZNF878   140000 perm   31 sec   (4446 perm/sec)   p_kst 7.142857e-06   p_cons 1   p_joint 6.071429e-04

Joint ci ratio: 4.250618e-01	ci left: 4.467018e-04	ci right 6.932719e-04	k: 84	n:150000
Cons ci ratio: 2.613298e-05	ci left: 9.999754e-01	ci right 1	k: 150000	n:150000
KS ci ratio: 2.771831e+00	ci left: 1.687854e-07	ci right 3.714372e-05	k: 1	n:150000
ZNF878   150000 perm   34 sec   (4375 perm/sec)   p_kst 6.666667e-06   p_cons 1   p_joint 5.600000e-04

Joint ci ratio: 5.102448e-01	ci left: 2.752726e-04	ci right 4.685904e-04	k: 58	n:160000
Cons ci ratio: 2.449969e-05	ci left: 9.999769e-01	ci right 1	k: 160000	n:160000
KS ci ratio: 2.771833e+00	ci left: 1.582363e-07	ci right 3.482227e-05	k: 1	n:160000
ZNF878   160000 perm   37 sec   (4310 perm/sec)   p_kst 6.250000e-06   p_cons 1   p_joint 3.625000e-04

Joint ci ratio: 4.788084e-01	ci left: 3.002735e-04	ci right 4.939044e-04	k: 66	n:170000
Cons ci ratio: 2.305855e-05	ci left: 9.999783e-01	ci right 1	k: 170000	n:170000
KS ci ratio: 2.771834e+00	ci left: 1.489283e-07	ci right 3.277393e-05	k: 1	n:170000
ZNF878   170000 perm   40 sec   (4243 perm/sec)   p_kst 5.882353e-06   p_cons 1   p_joint 3.882353e-04

Joint ci ratio: 5.333629e-01	ci left: 2.205666e-04	ci right 3.851231e-04	k: 53	n:180000
Cons ci ratio: 2.177754e-05	ci left: 9.999795e-01	ci right 1	k: 180000	n:180000
KS ci ratio: 2.771835e+00	ci left: 1.406545e-07	ci right 3.095318e-05	k: 1	n:180000
ZNF878   180000 perm   43 sec   (4178 perm/sec)   p_kst 5.555556e-06   p_cons 1   p_joint 2.944444e-04

Joint ci ratio: 5.435304e-01	ci left: 1.998634e-04	ci right 3.529092e-04	k: 51	n:190000
Cons ci ratio: 2.063136e-05	ci left: 9.999806e-01	ci right 1	k: 190000	n:190000
KS ci ratio: 2.771837e+00	ci left: 1.332516e-07	ci right 2.932409e-05	k: 1	n:190000
ZNF878   190000 perm   46 sec   (4116 perm/sec)   p_kst 5.263158e-06   p_cons 1   p_joint 2.684211e-04

Joint ci ratio: 5.333711e-01	ci left: 1.985093e-04	ci right 3.466124e-04	k: 53	n:200000
Cons ci ratio: 1.959980e-05	ci left: 9.999816e-01	ci right 1	k: 200000	n:200000
KS ci ratio: 2.771838e+00	ci left: 1.265890e-07	ci right 2.785790e-05	k: 1	n:200000
ZNF878   200000 perm   49 sec   (4055 perm/sec)   p_kst 5.000000e-06   p_cons 1   p_joint 2.650000e-04

Joint ci ratio: 5.237609e-01	ci left: 1.973084e-04	ci right 3.408916e-04	k: 55	n:210000
Cons ci ratio: 1.866649e-05	ci left: 9.999824e-01	ci right 1	k: 210000	n:210000
KS ci ratio: 2.771839e+00	ci left: 1.205610e-07	ci right 2.653135e-05	k: 1	n:210000
ZNF878   210000 perm   53 sec   (3996 perm/sec)   p_kst 4.761905e-06   p_cons 1   p_joint 2.619048e-04

Joint ci ratio: 5.059997e-01	ci left: 2.041585e-04	ci right 3.459216e-04	k: 59	n:220000
Cons ci ratio: 1.781802e-05	ci left: 9.999832e-01	ci right 1	k: 220000	n:220000
KS ci ratio: 2.771840e+00	ci left: 1.150809e-07	ci right 2.532539e-05	k: 1	n:220000
ZNF878   220000 perm   56 sec   (3938 perm/sec)   p_kst 4.545455e-06   p_cons 1   p_joint 2.681818e-04

Joint ci ratio: 4.938049e-01	ci left: 2.066802e-04	ci right 3.455573e-04	k: 62	n:230000
Cons ci ratio: 1.704333e-05	ci left: 9.999840e-01	ci right 1	k: 230000	n:230000
KS ci ratio: 2.771841e+00	ci left: 1.100774e-07	ci right 2.422430e-05	k: 1	n:230000
ZNF878   230000 perm   59 sec   (3882 perm/sec)   p_kst 4.347826e-06   p_cons 1   p_joint 2.695652e-04

Joint ci ratio: 4.899336e-01	ci left: 2.017179e-04	ci right 3.358392e-04	k: 63	n:240000
Cons ci ratio: 1.633320e-05	ci left: 9.999846e-01	ci right 1	k: 240000	n:240000
KS ci ratio: 2.771841e+00	ci left: 1.054909e-07	ci right 2.321496e-05	k: 1	n:240000
ZNF878   240000 perm   63 sec   (3829 perm/sec)   p_kst 4.166667e-06   p_cons 1   p_joint 2.625000e-04

Joint ci ratio: 4.824540e-01	ci left: 2.006681e-04	ci right 3.313795e-04	k: 65	n:250000
Cons ci ratio: 1.567987e-05	ci left: 9.999852e-01	ci right 1	k: 250000	n:250000
KS ci ratio: 2.771842e+00	ci left: 1.012712e-07	ci right 2.228637e-05	k: 1	n:250000
ZNF878   250000 perm   66 sec   (3777 perm/sec)   p_kst 4.000000e-06   p_cons 1   p_joint 2.600000e-04

Joint ci ratio: 4.753067e-01	ci left: 1.997134e-04	ci right 3.272487e-04	k: 67	n:260000
Cons ci ratio: 1.507681e-05	ci left: 9.999858e-01	ci right 1	k: 260000	n:260000
KS ci ratio: 2.771843e+00	ci left: 9.737618e-08	ci right 2.142921e-05	k: 1	n:260000
ZNF878   260000 perm   70 sec   (3725 perm/sec)   p_kst 3.846154e-06   p_cons 1   p_joint 2.576923e-04

Joint ci ratio: 4.651564e-01	ci left: 2.021107e-04	ci right 3.275473e-04	k: 70	n:270000
Cons ci ratio: 1.451841e-05	ci left: 9.999863e-01	ci right 1	k: 270000	n:270000
KS ci ratio: 2.771843e+00	ci left: 9.376965e-08	ci right 2.063554e-05	k: 1	n:270000
ZNF878   270000 perm   73 sec   (3675 perm/sec)   p_kst 3.703704e-06   p_cons 1   p_joint 2.592593e-04

Joint ci ratio: 5.435547e-01	ci left: 1.356202e-04	ci right 2.394774e-04	k: 51	n:280000
Cons ci ratio: 1.399990e-05	ci left: 9.999868e-01	ci right 1	k: 280000	n:280000
KS ci ratio: 2.771844e+00	ci left: 9.042074e-08	ci right 1.989856e-05	k: 1	n:280000
ZNF878   280000 perm   77 sec   (3626 perm/sec)   p_kst 3.571429e-06   p_cons 1   p_joint 1.821429e-04

Joint ci ratio: 5.384033e-01	ci left: 1.339204e-04	ci right 2.351351e-04	k: 52	n:290000
Cons ci ratio: 1.351715e-05	ci left: 9.999873e-01	ci right 1	k: 290000	n:290000
KS ci ratio: 2.771844e+00	ci left: 8.730278e-08	ci right 1.921241e-05	k: 1	n:290000
ZNF878   290000 perm   81 sec   (3578 perm/sec)   p_kst 3.448276e-06   p_cons 1   p_joint 1.793103e-04

Joint ci ratio: 5.384049e-01	ci left: 1.294562e-04	ci right 2.272975e-04	k: 52	n:300000
Cons ci ratio: 1.306658e-05	ci left: 9.999877e-01	ci right 1	k: 300000	n:300000
KS ci ratio: 2.771845e+00	ci left: 8.439269e-08	ci right 1.857200e-05	k: 1	n:300000
ZNF878   300000 perm   85 sec   (3532 perm/sec)   p_kst 3.333333e-06   p_cons 1   p_joint 1.733333e-04

Joint ci ratio: 5.191681e-01	ci left: 1.364602e-04	ci right 2.345764e-04	k: 56	n:310000
Cons ci ratio: 1.264508e-05	ci left: 9.999881e-01	ci right 1	k: 310000	n:310000
KS ci ratio: 2.771845e+00	ci left: 8.167035e-08	ci right 1.797291e-05	k: 1	n:310000
ZNF878   310000 perm   89 sec   (3487 perm/sec)   p_kst 3.225806e-06   p_cons 1   p_joint 1.806452e-04

Joint ci ratio: 5.060216e-01	ci left: 1.403577e-04	ci right 2.378240e-04	k: 59	n:320000
Cons ci ratio: 1.224992e-05	ci left: 9.999885e-01	ci right 1	k: 320000	n:320000
KS ci ratio: 2.771846e+00	ci left: 7.911815e-08	ci right 1.741126e-05	k: 1	n:320000
ZNF878   320000 perm   93 sec   (3443 perm/sec)   p_kst 3.125000e-06   p_cons 1   p_joint 1.843750e-04

Joint ci ratio: 5.018574e-01	ci left: 1.387492e-04	ci right 2.340299e-04	k: 60	n:330000
Cons ci ratio: 1.187872e-05	ci left: 9.999888e-01	ci right 1	k: 330000	n:330000
KS ci ratio: 2.771846e+00	ci left: 7.672063e-08	ci right 1.688365e-05	k: 1	n:330000
ZNF878   330000 perm   97 sec   (3400 perm/sec)   p_kst 3.030303e-06   p_cons 1   p_joint 1.818182e-04

Joint ci ratio: 4.977944e-01	ci left: 1.372385e-04	ci right 2.304560e-04	k: 61	n:340000
Cons ci ratio: 1.152934e-05	ci left: 9.999892e-01	ci right 1	k: 340000	n:340000
KS ci ratio: 2.771846e+00	ci left: 7.446414e-08	ci right 1.638708e-05	k: 1	n:340000
ZNF878   340000 perm   101 sec   (3351 perm/sec)   p_kst 2.941176e-06   p_cons 1   p_joint 1.794118e-04

Joint ci ratio: 5.779337e-01	ci left: 9.378238e-05	ci right 1.720349e-04	k: 45	n:350000
Cons ci ratio: 1.119994e-05	ci left: 9.999895e-01	ci right 1	k: 350000	n:350000
KS ci ratio: 2.771847e+00	ci left: 7.233659e-08	ci right 1.591888e-05	k: 1	n:350000
ZNF878   350000 perm   106 sec   (3311 perm/sec)   p_kst 2.857143e-06   p_cons 1   p_joint 1.285714e-04

Joint ci ratio: 5.843218e-01	ci left: 8.880821e-05	ci right 1.640742e-04	k: 44	n:360000
Cons ci ratio: 1.088883e-05	ci left: 9.999898e-01	ci right 1	k: 360000	n:360000
KS ci ratio: 2.771847e+00	ci left: 7.032724e-08	ci right 1.547669e-05	k: 1	n:360000
ZNF878   360000 perm   110 sec   (3271 perm/sec)   p_kst 2.777778e-06   p_cons 1   p_joint 1.222222e-04

Joint ci ratio: 5.657658e-01	ci left: 9.333613e-05	ci right 1.689155e-04	k: 47	n:370000
Cons ci ratio: 1.059454e-05	ci left: 9.999900e-01	ci right 1	k: 370000	n:370000
KS ci ratio: 2.771847e+00	ci left: 6.842651e-08	ci right 1.505840e-05	k: 1	n:370000
ZNF878   370000 perm   115 sec   (3220 perm/sec)   p_kst 2.702703e-06   p_cons 1   p_joint 1.270270e-04

Joint ci ratio: 4.619321e-01	ci left: 1.459280e-04	ci right 2.356701e-04	k: 71	n:380000
Cons ci ratio: 1.031574e-05	ci left: 9.999903e-01	ci right 1	k: 380000	n:380000
KS ci ratio: 2.771848e+00	ci left: 6.662581e-08	ci right 1.466213e-05	k: 1	n:380000
ZNF878   380000 perm   120 sec   (3180 perm/sec)   p_kst 2.631579e-06   p_cons 1   p_joint 1.868421e-04

Joint ci ratio: 4.718702e-01	ci left: 1.353990e-04	ci right 2.210364e-04	k: 68	n:390000
Cons ci ratio: 1.005123e-05	ci left: 9.999905e-01	ci right 1	k: 390000	n:390000
KS ci ratio: 2.771848e+00	ci left: 6.491745e-08	ci right 1.428618e-05	k: 1	n:390000
ZNF878   390000 perm   124 sec   (3140 perm/sec)   p_kst 2.564103e-06   p_cons 1   p_joint 1.743590e-04

Joint ci ratio: 4.753288e-01	ci left: 1.298125e-04	ci right 2.127143e-04	k: 67	n:400000
Cons ci ratio: 9.799951e-06	ci left: 9.999908e-01	ci right 1	k: 400000	n:400000
KS ci ratio: 2.771848e+00	ci left: 6.329452e-08	ci right 1.392903e-05	k: 1	n:400000
ZNF878   400000 perm   129 sec   (3103 perm/sec)   p_kst 2.500000e-06   p_cons 1   p_joint 1.675000e-04

Joint ci ratio: 4.718723e-01	ci left: 1.287941e-04	ci right 2.102544e-04	k: 68	n:410000
Cons ci ratio: 9.560929e-06	ci left: 9.999910e-01	ci right 1	k: 410000	n:410000
KS ci ratio: 2.771848e+00	ci left: 6.175075e-08	ci right 1.358930e-05	k: 1	n:410000
ZNF878   410000 perm   134 sec   (3067 perm/sec)   p_kst 2.439024e-06   p_cons 1   p_joint 1.658537e-04

Joint ci ratio: 4.651785e-01	ci left: 1.299271e-04	ci right 2.105687e-04	k: 70	n:420000
Cons ci ratio: 9.333289e-06	ci left: 9.999912e-01	ci right 1	k: 420000	n:420000
KS ci ratio: 2.771849e+00	ci left: 6.028049e-08	ci right 1.326575e-05	k: 1	n:420000
ZNF878   420000 perm   139 sec   (3022 perm/sec)   p_kst 2.380952e-06   p_cons 1   p_joint 1.666667e-04

Joint ci ratio: 4.651795e-01	ci left: 1.269055e-04	ci right 2.056718e-04	k: 70	n:430000
Cons ci ratio: 9.116237e-06	ci left: 9.999914e-01	ci right 1	k: 430000	n:430000
KS ci ratio: 2.771849e+00	ci left: 5.887862e-08	ci right 1.295724e-05	k: 1	n:430000
ZNF878   430000 perm   144 sec   (2990 perm/sec)   p_kst 2.325581e-06   p_cons 1   p_joint 1.627907e-04

Joint ci ratio: 4.526035e-01	ci left: 1.320611e-04	ci right 2.111323e-04	k: 74	n:440000
Cons ci ratio: 8.909050e-06	ci left: 9.999916e-01	ci right 1	k: 440000	n:440000
KS ci ratio: 2.771849e+00	ci left: 5.754047e-08	ci right 1.266276e-05	k: 1	n:440000
ZNF878   440000 perm   149 sec   (2959 perm/sec)   p_kst 2.272727e-06   p_cons 1   p_joint 1.681818e-04

Joint ci ratio: 4.466867e-01	ci left: 1.330675e-04	ci right 2.113851e-04	k: 76	n:450000
Cons ci ratio: 8.711072e-06	ci left: 9.999918e-01	ci right 1	k: 450000	n:450000
KS ci ratio: 2.771849e+00	ci left: 5.626179e-08	ci right 1.238137e-05	k: 1	n:450000
ZNF878   450000 perm   154 sec   (2927 perm/sec)   p_kst 2.222222e-06   p_cons 1   p_joint 1.688889e-04

Joint ci ratio: 4.382307e-01	ci left: 1.359698e-04	ci right 2.140337e-04	k: 79	n:460000
Cons ci ratio: 8.521702e-06	ci left: 9.999920e-01	ci right 1	k: 460000	n:460000
KS ci ratio: 2.771850e+00	ci left: 5.503871e-08	ci right 1.211221e-05	k: 1	n:460000
ZNF878   460000 perm   159 sec   (2896 perm/sec)   p_kst 2.173913e-06   p_cons 1   p_joint 1.717391e-04

Joint ci ratio: 4.328534e-01	ci left: 1.368655e-04	ci right 2.141989e-04	k: 81	n:470000
Cons ci ratio: 8.340390e-06	ci left: 9.999922e-01	ci right 1	k: 470000	n:470000
KS ci ratio: 2.771850e+00	ci left: 5.386768e-08	ci right 1.185450e-05	k: 1	n:470000
ZNF878   470000 perm   164 sec   (2862 perm/sec)   p_kst 2.127660e-06   p_cons 1   p_joint 1.723404e-04

Joint ci ratio: 4.251456e-01	ci left: 1.395892e-04	ci right 2.166574e-04	k: 84	n:480000
Cons ci ratio: 8.166633e-06	ci left: 9.999923e-01	ci right 1	k: 480000	n:480000
KS ci ratio: 2.771850e+00	ci left: 5.274543e-08	ci right 1.160754e-05	k: 1	n:480000
ZNF878   480000 perm   170 sec   (2830 perm/sec)   p_kst 2.083333e-06   p_cons 1   p_joint 1.750000e-04

Joint ci ratio: 4.251464e-01	ci left: 1.367404e-04	ci right 2.122359e-04	k: 84	n:490000
Cons ci ratio: 7.999967e-06	ci left: 9.999925e-01	ci right 1	k: 490000	n:490000
KS ci ratio: 2.771850e+00	ci left: 5.166899e-08	ci right 1.137065e-05	k: 1	n:490000
ZNF878   490000 perm   175 sec   (2801 perm/sec)   p_kst 2.040816e-06   p_cons 1   p_joint 1.714286e-04

Joint ci ratio: 4.276707e-01	ci left: 1.322202e-04	ci right 2.057779e-04	k: 83	n:500000
Cons ci ratio: 7.839969e-06	ci left: 9.999926e-01	ci right 1	k: 500000	n:500000
KS ci ratio: 2.771850e+00	ci left: 5.063561e-08	ci right 1.114324e-05	k: 1	n:500000
ZNF878   500000 perm   180 sec   (2773 perm/sec)   p_kst 2.000000e-06   p_cons 1   p_joint 1.660000e-04

Joint ci ratio: 4.466913e-01	ci left: 1.174122e-04	ci right 1.865168e-04	k: 76	n:510000
Cons ci ratio: 7.686244e-06	ci left: 9.999928e-01	ci right 1	k: 510000	n:510000
KS ci ratio: 2.771850e+00	ci left: 4.964276e-08	ci right 1.092474e-05	k: 1	n:510000
ZNF878   510000 perm   186 sec   (2747 perm/sec)   p_kst 1.960784e-06   p_cons 1   p_joint 1.490196e-04

Joint ci ratio: 4.556579e-01	ci left: 1.100407e-04	ci right 1.765094e-04	k: 73	n:520000
Cons ci ratio: 7.538433e-06	ci left: 9.999929e-01	ci right 1	k: 520000	n:520000
KS ci ratio: 2.771851e+00	ci left: 4.868809e-08	ci right 1.071465e-05	k: 1	n:520000
ZNF878   520000 perm   191 sec   (2721 perm/sec)   p_kst 1.923077e-06   p_cons 1   p_joint 1.403846e-04

Joint ci ratio: 4.496222e-01	ci left: 1.113077e-04	ci right 1.773801e-04	k: 75	n:530000
Cons ci ratio: 7.396199e-06	ci left: 9.999930e-01	ci right 1	k: 530000	n:530000
KS ci ratio: 2.771851e+00	ci left: 4.776945e-08	ci right 1.051249e-05	k: 1	n:530000
ZNF878   530000 perm   197 sec   (2693 perm/sec)   p_kst 1.886792e-06   p_cons 1   p_joint 1.415094e-04

Joint ci ratio: 4.438201e-01	ci left: 1.125334e-04	ci right 1.782131e-04	k: 77	n:540000
Cons ci ratio: 7.259232e-06	ci left: 9.999932e-01	ci right 1	k: 540000	n:540000
KS ci ratio: 2.771851e+00	ci left: 4.688483e-08	ci right 1.031781e-05	k: 1	n:540000
ZNF878   540000 perm   202 sec   (2668 perm/sec)   p_kst 1.851852e-06   p_cons 1   p_joint 1.425926e-04

Joint ci ratio: 4.410024e-01	ci left: 1.121030e-04	ci right 1.769924e-04	k: 78	n:550000
Cons ci ratio: 7.127247e-06	ci left: 9.999933e-01	ci right 1	k: 550000	n:550000
KS ci ratio: 2.771851e+00	ci left: 4.603238e-08	ci right 1.013022e-05	k: 1	n:550000
ZNF878   550000 perm   208 sec   (2643 perm/sec)   p_kst 1.818182e-06   p_cons 1   p_joint 1.418182e-04

Joint ci ratio: 4.382376e-01	ci left: 1.116891e-04	ci right 1.758140e-04	k: 79	n:560000
Cons ci ratio: 6.999975e-06	ci left: 9.999934e-01	ci right 1	k: 560000	n:560000
KS ci ratio: 2.771851e+00	ci left: 4.521037e-08	ci right 9.949323e-06	k: 1	n:560000
ZNF878   560000 perm   214 sec   (2615 perm/sec)   p_kst 1.785714e-06   p_cons 1   p_joint 1.410714e-04

Joint ci ratio: 4.328601e-01	ci left: 1.128536e-04	ci right 1.766208e-04	k: 81	n:570000
Cons ci ratio: 6.877169e-06	ci left: 9.999935e-01	ci right 1	k: 570000	n:570000
KS ci ratio: 2.771851e+00	ci left: 4.441721e-08	ci right 9.774774e-06	k: 1	n:570000
ZNF878   570000 perm   220 sec   (2591 perm/sec)   p_kst 1.754386e-06   p_cons 1   p_joint 1.421053e-04

Joint ci ratio: 4.302447e-01	ci left: 1.124447e-04	ci right 1.754860e-04	k: 82	n:580000
Cons ci ratio: 6.758597e-06	ci left: 9.999936e-01	ci right 1	k: 580000	n:580000
KS ci ratio: 2.771851e+00	ci left: 4.365139e-08	ci right 9.606244e-06	k: 1	n:580000
ZNF878   580000 perm   226 sec   (2566 perm/sec)   p_kst 1.724138e-06   p_cons 1   p_joint 1.413793e-04

Joint ci ratio: 4.496255e-01	ci left: 9.998815e-05	ci right 1.593418e-04	k: 75	n:590000
Cons ci ratio: 6.644045e-06	ci left: 9.999937e-01	ci right 1	k: 590000	n:590000
KS ci ratio: 2.771852e+00	ci left: 4.291154e-08	ci right 9.443427e-06	k: 1	n:590000
ZNF878   590000 perm   232 sec   (2543 perm/sec)   p_kst 1.694915e-06   p_cons 1   p_joint 1.271186e-04

Joint ci ratio: 4.496260e-01	ci left: 9.832166e-05	ci right 1.566861e-04	k: 75	n:600000
Cons ci ratio: 6.533312e-06	ci left: 9.999939e-01	ci right 1	k: 600000	n:600000
KS ci ratio: 2.771852e+00	ci left: 4.219635e-08	ci right 9.286037e-06	k: 1	n:600000
ZNF878   600000 perm   238 sec   (2517 perm/sec)   p_kst 1.666667e-06   p_cons 1   p_joint 1.250000e-04

Joint ci ratio: 4.466969e-01	ci left: 9.816410e-05	ci right 1.559407e-04	k: 76	n:610000
Cons ci ratio: 6.426208e-06	ci left: 9.999940e-01	ci right 1	k: 610000	n:610000
KS ci ratio: 2.771852e+00	ci left: 4.150460e-08	ci right 9.133807e-06	k: 1	n:610000
ZNF878   610000 perm   245 sec   (2495 perm/sec)   p_kst 1.639344e-06   p_cons 1   p_joint 1.245902e-04

Joint ci ratio: 4.410060e-01	ci left: 9.944601e-05	ci right 1.570097e-04	k: 78	n:620000
Cons ci ratio: 6.322560e-06	ci left: 9.999941e-01	ci right 1	k: 620000	n:620000
KS ci ratio: 2.771852e+00	ci left: 4.083517e-08	ci right 8.986488e-06	k: 1	n:620000
ZNF878   620000 perm   251 sec   (2471 perm/sec)   p_kst 1.612903e-06   p_cons 1   p_joint 1.258065e-04

Joint ci ratio: 4.382411e-01	ci left: 9.927907e-05	ci right 1.562794e-04	k: 79	n:630000
Cons ci ratio: 6.222202e-06	ci left: 9.999941e-01	ci right 1	k: 630000	n:630000
KS ci ratio: 2.771852e+00	ci left: 4.018700e-08	ci right 8.843846e-06	k: 1	n:630000
ZNF878   630000 perm   257 sec   (2448 perm/sec)   p_kst 1.587302e-06   p_cons 1   p_joint 1.253968e-04

Joint ci ratio: 4.355277e-01	ci left: 9.911843e-05	ci right 1.555709e-04	k: 80	n:640000
Cons ci ratio: 6.124981e-06	ci left: 9.999942e-01	ci right 1	k: 640000	n:640000
KS ci ratio: 2.771852e+00	ci left: 3.955907e-08	ci right 8.705662e-06	k: 1	n:640000
ZNF878   640000 perm   264 sec   (2426 perm/sec)   p_kst 1.562500e-06   p_cons 1   p_joint 1.250000e-04

Joint ci ratio: 4.302481e-01	ci left: 1.003351e-04	ci right 1.565878e-04	k: 82	n:650000
Cons ci ratio: 6.030751e-06	ci left: 9.999943e-01	ci right 1	k: 650000	n:650000
KS ci ratio: 2.771852e+00	ci left: 3.895047e-08	ci right 8.571729e-06	k: 1	n:650000
ZNF878   650000 perm   270 sec   (2403 perm/sec)   p_kst 1.538462e-06   p_cons 1   p_joint 1.261538e-04

Joint ci ratio: 4.302485e-01	ci left: 9.881487e-05	ci right 1.542153e-04	k: 82	n:660000
Cons ci ratio: 5.939376e-06	ci left: 9.999944e-01	ci right 1	k: 660000	n:660000
KS ci ratio: 2.771852e+00	ci left: 3.836031e-08	ci right 8.441855e-06	k: 1	n:660000
ZNF878   660000 perm   277 sec   (2380 perm/sec)   p_kst 1.515152e-06   p_cons 1   p_joint 1.242424e-04

Joint ci ratio: 4.251564e-01	ci left: 1.000037e-04	ci right 1.552182e-04	k: 84	n:670000
Cons ci ratio: 5.850729e-06	ci left: 9.999945e-01	ci right 1	k: 670000	n:670000
KS ci ratio: 2.771852e+00	ci left: 3.778777e-08	ci right 8.315857e-06	k: 1	n:670000
ZNF878   670000 perm   284 sec   (2358 perm/sec)   p_kst 1.492537e-06   p_cons 1   p_joint 1.253731e-04

Joint ci ratio: 4.251568e-01	ci left: 9.853306e-05	ci right 1.529356e-04	k: 84	n:680000
Cons ci ratio: 5.764689e-06	ci left: 9.999946e-01	ci right 1	k: 680000	n:680000
KS ci ratio: 2.771852e+00	ci left: 3.723207e-08	ci right 8.193566e-06	k: 1	n:680000
ZNF878   680000 perm   291 sec   (2338 perm/sec)   p_kst 1.470588e-06   p_cons 1   p_joint 1.235294e-04

Joint ci ratio: 4.467002e-01	ci left: 8.678263e-05	ci right 1.378609e-04	k: 76	n:690000
Cons ci ratio: 5.681143e-06	ci left: 9.999947e-01	ci right 1	k: 690000	n:690000
KS ci ratio: 2.771853e+00	ci left: 3.669247e-08	ci right 8.074819e-06	k: 1	n:690000
ZNF878   690000 perm   298 sec   (2317 perm/sec)   p_kst 1.449275e-06   p_cons 1   p_joint 1.101449e-04

Joint ci ratio: 4.467006e-01	ci left: 8.554286e-05	ci right 1.358915e-04	k: 76	n:700000
Cons ci ratio: 5.599984e-06	ci left: 9.999947e-01	ci right 1	k: 700000	n:700000
KS ci ratio: 2.771853e+00	ci left: 3.616830e-08	ci right 7.959465e-06	k: 1	n:700000
ZNF878   700000 perm   305 sec   (2297 perm/sec)   p_kst 1.428571e-06   p_cons 1   p_joint 1.085714e-04

Joint ci ratio: 4.587774e-01	ci left: 7.934669e-05	ci right 1.277055e-04	k: 72	n:710000
Cons ci ratio: 5.521111e-06	ci left: 9.999948e-01	ci right 1	k: 710000	n:710000
KS ci ratio: 2.771853e+00	ci left: 3.565888e-08	ci right 7.847360e-06	k: 1	n:710000
ZNF878   710000 perm   312 sec   (2274 perm/sec)   p_kst 1.408451e-06   p_cons 1   p_joint 1.014085e-04

Joint ci ratio: 4.753470e-01	ci left: 7.211748e-05	ci right 1.181758e-04	k: 67	n:720000
Cons ci ratio: 5.444429e-06	ci left: 9.999949e-01	ci right 1	k: 720000	n:720000
KS ci ratio: 2.771853e+00	ci left: 3.516362e-08	ci right 7.738369e-06	k: 1	n:720000
ZNF878   720000 perm   320 sec   (2250 perm/sec)   p_kst 1.388889e-06   p_cons 1   p_joint 9.305556e-05

Joint ci ratio: 5.285524e-01	ci left: 5.557097e-05	ci right 9.651711e-05	k: 54	n:730000
Cons ci ratio: 5.369848e-06	ci left: 9.999949e-01	ci right 1	k: 730000	n:730000
KS ci ratio: 2.771853e+00	ci left: 3.468193e-08	ci right 7.632364e-06	k: 1	n:730000
ZNF878   730000 perm   328 sec   (2226 perm/sec)   p_kst 1.369863e-06   p_cons 1   p_joint 7.397260e-05

Joint ci ratio: 5.285527e-01	ci left: 5.482000e-05	ci right 9.521284e-05	k: 54	n:740000
Cons ci ratio: 5.297283e-06	ci left: 9.999950e-01	ci right 1	k: 740000	n:740000
KS ci ratio: 2.771853e+00	ci left: 3.421325e-08	ci right 7.529225e-06	k: 1	n:740000
ZNF878   740000 perm   335 sec   (2207 perm/sec)   p_kst 1.351351e-06   p_cons 1   p_joint 7.297297e-05

Joint ci ratio: 5.238121e-01	ci left: 5.524517e-05	ci right 9.545236e-05	k: 55	n:750000
Cons ci ratio: 5.226653e-06	ci left: 9.999951e-01	ci right 1	k: 750000	n:750000
KS ci ratio: 2.771853e+00	ci left: 3.375708e-08	ci right 7.428835e-06	k: 1	n:750000
ZNF878   750000 perm   343 sec   (2189 perm/sec)   p_kst 1.333333e-06   p_cons 1   p_joint 7.333333e-05

Joint ci ratio: 5.238124e-01	ci left: 5.451825e-05	ci right 9.419642e-05	k: 55	n:760000
Cons ci ratio: 5.157881e-06	ci left: 9.999951e-01	ci right 1	k: 760000	n:760000
KS ci ratio: 2.771853e+00	ci left: 3.331290e-08	ci right 7.331088e-06	k: 1	n:760000
ZNF878   760000 perm   350 sec   (2172 perm/sec)   p_kst 1.315789e-06   p_cons 1   p_joint 7.236842e-05

Joint ci ratio: 5.191971e-01	ci left: 5.493785e-05	ci right 9.444139e-05	k: 56	n:770000
Cons ci ratio: 5.090896e-06	ci left: 9.999952e-01	ci right 1	k: 770000	n:770000
KS ci ratio: 2.263207e+00	ci left: 3.145577e-07	ci right 9.382679e-06	k: 2	n:770000
ZNF878   770000 perm   357 sec   (2154 perm/sec)   p_kst 2.597403e-06   p_cons 1   p_joint 7.272727e-05

Joint ci ratio: 5.103209e-01	ci left: 5.646436e-05	ci right 9.612517e-05	k: 58	n:780000
Cons ci ratio: 5.025628e-06	ci left: 9.999953e-01	ci right 1	k: 780000	n:780000
KS ci ratio: 2.263207e+00	ci left: 3.105249e-07	ci right 9.262389e-06	k: 2	n:780000
ZNF878   780000 perm   365 sec   (2137 perm/sec)   p_kst 2.564103e-06   p_cons 1   p_joint 7.435897e-05

Joint ci ratio: 5.147020e-01	ci left: 5.464759e-05	ci right 9.348016e-05	k: 57	n:790000
Cons ci ratio: 4.962013e-06	ci left: 9.999953e-01	ci right 1	k: 790000	n:790000
KS ci ratio: 2.263207e+00	ci left: 3.065942e-07	ci right 9.145144e-06	k: 2	n:790000
ZNF878   790000 perm   373 sec   (2120 perm/sec)   p_kst 2.531646e-06   p_cons 1   p_joint 7.215190e-05

Joint ci ratio: 5.103214e-01	ci left: 5.505274e-05	ci right 9.372207e-05	k: 58	n:800000
Cons ci ratio: 4.899988e-06	ci left: 9.999954e-01	ci right 1	k: 800000	n:800000
KS ci ratio: 2.263207e+00	ci left: 3.027617e-07	ci right 9.030830e-06	k: 2	n:800000
ZNF878   800000 perm   380 sec   (2104 perm/sec)   p_kst 2.500000e-06   p_cons 1   p_joint 7.250000e-05

Joint ci ratio: 5.103216e-01	ci left: 5.437307e-05	ci right 9.256502e-05	k: 58	n:810000
Cons ci ratio: 4.839494e-06	ci left: 9.999954e-01	ci right 1	k: 810000	n:810000
KS ci ratio: 2.263207e+00	ci left: 2.990239e-07	ci right 8.919339e-06	k: 2	n:810000
ZNF878   810000 perm   388 sec   (2088 perm/sec)   p_kst 2.469136e-06   p_cons 1   p_joint 7.160494e-05

Joint ci ratio: 5.103219e-01	ci left: 5.370998e-05	ci right 9.143619e-05	k: 58	n:820000
Cons ci ratio: 4.780476e-06	ci left: 9.999955e-01	ci right 1	k: 820000	n:820000
KS ci ratio: 2.263208e+00	ci left: 2.953773e-07	ci right 8.810567e-06	k: 2	n:820000
ZNF878   820000 perm   396 sec   (2072 perm/sec)   p_kst 2.439024e-06   p_cons 1   p_joint 7.073171e-05

Joint ci ratio: 5.285549e-01	ci left: 4.887562e-05	ci right 8.488866e-05	k: 54	n:830000
Cons ci ratio: 4.722880e-06	ci left: 9.999956e-01	ci right 1	k: 830000	n:830000
KS ci ratio: 2.263208e+00	ci left: 2.918185e-07	ci right 8.704416e-06	k: 2	n:830000
ZNF878   830000 perm   404 sec   (2057 perm/sec)   p_kst 2.409639e-06   p_cons 1   p_joint 6.506024e-05

Joint ci ratio: 5.238143e-01	ci left: 4.932600e-05	ci right 8.522542e-05	k: 55	n:840000
Cons ci ratio: 4.666656e-06	ci left: 9.999956e-01	ci right 1	k: 840000	n:840000
KS ci ratio: 2.263208e+00	ci left: 2.883445e-07	ci right 8.600792e-06	k: 2	n:840000
ZNF878   840000 perm   411 sec   (2042 perm/sec)   p_kst 2.380952e-06   p_cons 1   p_joint 6.547619e-05

Joint ci ratio: 5.147034e-01	ci left: 5.079008e-05	ci right 8.688162e-05	k: 57	n:850000
Cons ci ratio: 4.611754e-06	ci left: 9.999957e-01	ci right 1	k: 850000	n:850000
KS ci ratio: 2.263208e+00	ci left: 2.849522e-07	ci right 8.499606e-06	k: 2	n:850000
ZNF878   850000 perm   420 sec   (2023 perm/sec)   p_kst 2.352941e-06   p_cons 1   p_joint 6.705882e-05

Joint ci ratio: 5.018865e-01	ci left: 5.324032e-05	ci right 8.980363e-05	k: 60	n:860000
Cons ci ratio: 4.558129e-06	ci left: 9.999957e-01	ci right 1	k: 860000	n:860000
KS ci ratio: 2.263208e+00	ci left: 2.816388e-07	ci right 8.400774e-06	k: 2	n:860000
ZNF878   860000 perm   428 sec   (2009 perm/sec)   p_kst 2.325581e-06   p_cons 1   p_joint 6.976744e-05

Joint ci ratio: 4.978225e-01	ci left: 5.363279e-05	ci right 9.006468e-05	k: 61	n:870000
Cons ci ratio: 4.505737e-06	ci left: 9.999958e-01	ci right 1	k: 870000	n:870000
KS ci ratio: 2.263208e+00	ci left: 2.784016e-07	ci right 8.304214e-06	k: 2	n:870000
ZNF878   870000 perm   436 sec   (1995 perm/sec)   p_kst 2.298851e-06   p_cons 1   p_joint 7.011494e-05

Joint ci ratio: 4.978227e-01	ci left: 5.302332e-05	ci right 8.904123e-05	k: 61	n:880000
Cons ci ratio: 4.454535e-06	ci left: 9.999958e-01	ci right 1	k: 880000	n:880000
KS ci ratio: 2.263208e+00	ci left: 2.752379e-07	ci right 8.209848e-06	k: 2	n:880000
ZNF878   880000 perm   444 sec   (1980 perm/sec)   p_kst 2.272727e-06   p_cons 1   p_joint 6.931818e-05

Joint ci ratio: 4.938558e-01	ci left: 5.341057e-05	ci right 8.930384e-05	k: 62	n:890000
Cons ci ratio: 4.404484e-06	ci left: 9.999959e-01	ci right 1	k: 890000	n:890000
KS ci ratio: 2.263208e+00	ci left: 2.721454e-07	ci right 8.117603e-06	k: 2	n:890000
ZNF878   890000 perm   453 sec   (1965 perm/sec)   p_kst 2.247191e-06   p_cons 1   p_joint 6.966292e-05

Joint ci ratio: 5.060527e-01	ci left: 4.990429e-05	ci right 8.456109e-05	k: 59	n:900000
Cons ci ratio: 4.355546e-06	ci left: 9.999959e-01	ci right 1	k: 900000	n:900000
KS ci ratio: 2.263208e+00	ci left: 2.691215e-07	ci right 8.027407e-06	k: 2	n:900000
ZNF878   900000 perm   461 sec   (1951 perm/sec)   p_kst 2.222222e-06   p_cons 1   p_joint 6.555556e-05

Joint ci ratio: 5.060529e-01	ci left: 4.935589e-05	ci right 8.363185e-05	k: 59	n:910000
Cons ci ratio: 4.307683e-06	ci left: 9.999959e-01	ci right 1	k: 910000	n:910000
KS ci ratio: 2.263208e+00	ci left: 2.661642e-07	ci right 7.939194e-06	k: 2	n:910000
ZNF878   910000 perm   470 sec   (1937 perm/sec)   p_kst 2.197802e-06   p_cons 1   p_joint 6.483516e-05

Joint ci ratio: 5.060530e-01	ci left: 4.881941e-05	ci right 8.272282e-05	k: 59	n:920000
Cons ci ratio: 4.260860e-06	ci left: 9.999960e-01	ci right 1	k: 920000	n:920000
KS ci ratio: 2.263208e+00	ci left: 2.632711e-07	ci right 7.852899e-06	k: 2	n:920000
ZNF878   920000 perm   479 sec   (1922 perm/sec)   p_kst 2.173913e-06   p_cons 1   p_joint 6.413043e-05

Joint ci ratio: 5.018878e-01	ci left: 4.923295e-05	ci right 8.304428e-05	k: 60	n:930000
Cons ci ratio: 4.215045e-06	ci left: 9.999960e-01	ci right 1	k: 930000	n:930000
KS ci ratio: 2.263208e+00	ci left: 2.604402e-07	ci right 7.768460e-06	k: 2	n:930000
ZNF878   930000 perm   487 sec   (1908 perm/sec)   p_kst 2.150538e-06   p_cons 1   p_joint 6.451613e-05

Joint ci ratio: 5.018880e-01	ci left: 4.870919e-05	ci right 8.216084e-05	k: 60	n:940000
Cons ci ratio: 4.170204e-06	ci left: 9.999961e-01	ci right 1	k: 940000	n:940000
KS ci ratio: 2.263208e+00	ci left: 2.576695e-07	ci right 7.685817e-06	k: 2	n:940000
ZNF878   940000 perm   496 sec   (1895 perm/sec)   p_kst 2.127660e-06   p_cons 1   p_joint 6.382979e-05

Joint ci ratio: 4.978240e-01	ci left: 4.911631e-05	ci right 8.248035e-05	k: 61	n:950000
Cons ci ratio: 4.126307e-06	ci left: 9.999961e-01	ci right 1	k: 950000	n:950000
KS ci ratio: 2.263208e+00	ci left: 2.549572e-07	ci right 7.604913e-06	k: 2	n:950000
ZNF878   950000 perm   505 sec   (1882 perm/sec)   p_kst 2.105263e-06   p_cons 1   p_joint 6.421053e-05

Joint ci ratio: 4.938571e-01	ci left: 4.951602e-05	ci right 8.279216e-05	k: 62	n:960000
Cons ci ratio: 4.083325e-06	ci left: 9.999962e-01	ci right 1	k: 960000	n:960000
KS ci ratio: 2.263208e+00	ci left: 2.523014e-07	ci right 7.525696e-06	k: 2	n:960000
ZNF878   960000 perm   514 sec   (1869 perm/sec)   p_kst 2.083333e-06   p_cons 1   p_joint 6.458333e-05

Joint ci ratio: 4.938573e-01	ci left: 4.900554e-05	ci right 8.193865e-05	k: 62	n:970000
Cons ci ratio: 4.041229e-06	ci left: 9.999962e-01	ci right 1	k: 970000	n:970000
KS ci ratio: 2.263208e+00	ci left: 2.497004e-07	ci right 7.448112e-06	k: 2	n:970000
ZNF878   970000 perm   523 sec   (1855 perm/sec)   p_kst 2.061856e-06   p_cons 1   p_joint 6.391753e-05

Joint ci ratio: 4.899837e-01	ci left: 4.939925e-05	ci right 8.224862e-05	k: 63	n:980000
Cons ci ratio: 3.999992e-06	ci left: 9.999962e-01	ci right 1	k: 980000	n:980000
KS ci ratio: 2.263208e+00	ci left: 2.471524e-07	ci right 7.372111e-06	k: 2	n:980000
ZNF878   980000 perm   532 sec   (1843 perm/sec)   p_kst 2.040816e-06   p_cons 1   p_joint 6.428571e-05

Joint ci ratio: 4.899839e-01	ci left: 4.890026e-05	ci right 8.141783e-05	k: 63	n:990000
Cons ci ratio: 3.959588e-06	ci left: 9.999963e-01	ci right 1	k: 990000	n:990000
KS ci ratio: 2.263208e+00	ci left: 2.446559e-07	ci right 7.297645e-06	k: 2	n:990000
ZNF878   990000 perm   541 sec   (1830 perm/sec)   p_kst 2.020202e-06   p_cons 1   p_joint 6.363636e-05

Joint ci ratio: 4.978248e-01	ci left: 4.666048e-05	ci right 7.835637e-05	k: 61	n:1000000
Cons ci ratio: 3.919992e-06	ci left: 9.999963e-01	ci right 1	k: 1000000	n:1000000
KS ci ratio: 2.771854e+00	ci left: 2.531781e-08	ci right 5.571631e-06	k: 1	n:1000000
ZNF878   1000000 perm   550 sec   (1817 perm/sec)   p_kst 1.000000e-06   p_cons 1   p_joint 6.100000e-05

Joint ci ratio: 4.978250e-01	ci left: 4.619849e-05	ci right 7.758057e-05	k: 61	n:1010000
Cons ci ratio: 3.881180e-06	ci left: 9.999963e-01	ci right 1	k: 1010000	n:1010000
KS ci ratio: 2.771854e+00	ci left: 2.506714e-08	ci right 5.516466e-06	k: 1	n:1010000
ZNF878   1010000 perm   560 sec   (1805 perm/sec)   p_kst 9.900990e-07   p_cons 1   p_joint 6.039604e-05

Joint ci ratio: 4.652020e-01	ci left: 5.349884e-05	ci right 8.670587e-05	k: 70	n:1020000
Cons ci ratio: 3.843130e-06	ci left: 9.999964e-01	ci right 1	k: 1020000	n:1020000
KS ci ratio: 2.771855e+00	ci left: 2.482138e-08	ci right 5.462383e-06	k: 1	n:1020000
ZNF878   1020000 perm   569 sec   (1792 perm/sec)   p_kst 9.803922e-07   p_cons 1   p_joint 6.862745e-05

Joint ci ratio: 4.652021e-01	ci left: 5.297943e-05	ci right 8.586407e-05	k: 70	n:1030000
Cons ci ratio: 3.805818e-06	ci left: 9.999964e-01	ci right 1	k: 1030000	n:1030000
KS ci ratio: 2.771855e+00	ci left: 2.458040e-08	ci right 5.409351e-06	k: 1	n:1030000
ZNF878   1030000 perm   579 sec   (1780 perm/sec)   p_kst 9.708738e-07   p_cons 1   p_joint 6.796117e-05

Joint ci ratio: 4.619602e-01	ci left: 5.331921e-05	ci right 8.611158e-05	k: 71	n:1040000
Cons ci ratio: 3.769224e-06	ci left: 9.999965e-01	ci right 1	k: 1040000	n:1040000
KS ci ratio: 2.771855e+00	ci left: 2.434405e-08	ci right 5.357338e-06	k: 1	n:1040000
ZNF878   1040000 perm   588 sec   (1767 perm/sec)   p_kst 9.615385e-07   p_cons 1   p_joint 6.826923e-05

Joint ci ratio: 4.556745e-01	ci left: 5.449595e-05	ci right 8.741497e-05	k: 73	n:1050000
Cons ci ratio: 3.733326e-06	ci left: 9.999965e-01	ci right 1	k: 1050000	n:1050000
KS ci ratio: 2.771855e+00	ci left: 2.411220e-08	ci right 5.306315e-06	k: 1	n:1050000
ZNF878   1050000 perm   598 sec   (1756 perm/sec)   p_kst 9.523810e-07   p_cons 1   p_joint 6.952381e-05

Joint ci ratio: 4.556746e-01	ci left: 5.398184e-05	ci right 8.659031e-05	k: 73	n:1060000
Cons ci ratio: 3.698106e-06	ci left: 9.999965e-01	ci right 1	k: 1060000	n:1060000
KS ci ratio: 2.771855e+00	ci left: 2.388472e-08	ci right 5.256256e-06	k: 1	n:1060000
ZNF878   1060000 perm   608 sec   (1744 perm/sec)   p_kst 9.433962e-07   p_cons 1   p_joint 6.886792e-05

Joint ci ratio: 4.556748e-01	ci left: 5.347733e-05	ci right 8.578106e-05	k: 73	n:1070000
Cons ci ratio: 3.663545e-06	ci left: 9.999966e-01	ci right 1	k: 1070000	n:1070000
KS ci ratio: 2.771855e+00	ci left: 2.366150e-08	ci right 5.207132e-06	k: 1	n:1070000
ZNF878   1070000 perm   617 sec   (1733 perm/sec)   p_kst 9.345794e-07   p_cons 1   p_joint 6.822430e-05

Joint ci ratio: 4.556749e-01	ci left: 5.298217e-05	ci right 8.498680e-05	k: 73	n:1080000
Cons ci ratio: 3.629623e-06	ci left: 9.999966e-01	ci right 1	k: 1080000	n:1080000
KS ci ratio: 2.771855e+00	ci left: 2.344241e-08	ci right 5.158918e-06	k: 1	n:1080000
ZNF878   1080000 perm   627 sec   (1721 perm/sec)   p_kst 9.259259e-07   p_cons 1   p_joint 6.759259e-05

Joint ci ratio: 4.556751e-01	ci left: 5.249609e-05	ci right 8.420711e-05	k: 73	n:1090000
Cons ci ratio: 3.596324e-06	ci left: 9.999966e-01	ci right 1	k: 1090000	n:1090000
KS ci ratio: 2.771855e+00	ci left: 2.322735e-08	ci right 5.111589e-06	k: 1	n:1090000
ZNF878   1090000 perm   638 sec   (1709 perm/sec)   p_kst 9.174312e-07   p_cons 1   p_joint 6.697248e-05

Joint ci ratio: 4.556752e-01	ci left: 5.201885e-05	ci right 8.344160e-05	k: 73	n:1100000
Cons ci ratio: 3.563630e-06	ci left: 9.999966e-01	ci right 1	k: 1100000	n:1100000
KS ci ratio: 2.771855e+00	ci left: 2.301619e-08	ci right 5.065120e-06	k: 1	n:1100000
ZNF878   1100000 perm   648 sec   (1697 perm/sec)   p_kst 9.090909e-07   p_cons 1   p_joint 6.636364e-05

Joint ci ratio: 4.526271e-01	ci left: 5.234802e-05	ci right 8.369318e-05	k: 74	n:1110000
Cons ci ratio: 3.531525e-06	ci left: 9.999967e-01	ci right 1	k: 1110000	n:1110000
KS ci ratio: 2.771855e+00	ci left: 2.280884e-08	ci right 5.019488e-06	k: 1	n:1110000
ZNF878   1110000 perm   659 sec   (1685 perm/sec)   p_kst 9.009009e-07   p_cons 1   p_joint 6.666667e-05

Joint ci ratio: 4.526273e-01	ci left: 5.188063e-05	ci right 8.294593e-05	k: 74	n:1120000
Cons ci ratio: 3.499994e-06	ci left: 9.999967e-01	ci right 1	k: 1120000	n:1120000
KS ci ratio: 2.771855e+00	ci left: 2.260519e-08	ci right 4.974671e-06	k: 1	n:1120000
ZNF878   1120000 perm   670 sec   (1673 perm/sec)   p_kst 8.928571e-07   p_cons 1   p_joint 6.607143e-05

Joint ci ratio: 4.526274e-01	ci left: 5.142150e-05	ci right 8.221190e-05	k: 74	n:1130000
Cons ci ratio: 3.469020e-06	ci left: 9.999967e-01	ci right 1	k: 1130000	n:1130000
KS ci ratio: 2.771855e+00	ci left: 2.240514e-08	ci right 4.930648e-06	k: 1	n:1130000
ZNF878   1130000 perm   680 sec   (1663 perm/sec)   p_kst 8.849558e-07   p_cons 1   p_joint 6.548673e-05

Joint ci ratio: 4.556758e-01	ci left: 5.019361e-05	ci right 8.051385e-05	k: 73	n:1140000
Cons ci ratio: 3.438590e-06	ci left: 9.999968e-01	ci right 1	k: 1140000	n:1140000
KS ci ratio: 2.771855e+00	ci left: 2.220860e-08	ci right 4.887397e-06	k: 1	n:1140000
ZNF878   1140000 perm   690 sec   (1651 perm/sec)   p_kst 8.771930e-07   p_cons 1   p_joint 6.403509e-05

Joint ci ratio: 4.526277e-01	ci left: 5.052721e-05	ci right 8.078214e-05	k: 74	n:1150000
Cons ci ratio: 3.408690e-06	ci left: 9.999968e-01	ci right 1	k: 1150000	n:1150000
KS ci ratio: 2.771855e+00	ci left: 2.201548e-08	ci right 4.844898e-06	k: 1	n:1150000
ZNF878   1150000 perm   701 sec   (1640 perm/sec)   p_kst 8.695652e-07   p_cons 1   p_joint 6.434783e-05

Joint ci ratio: 4.496399e-01	ci left: 5.085572e-05	ci right 8.104515e-05	k: 75	n:1160000
Cons ci ratio: 3.379305e-06	ci left: 9.999968e-01	ci right 1	k: 1160000	n:1160000
KS ci ratio: 2.771855e+00	ci left: 2.182570e-08	ci right 4.803131e-06	k: 1	n:1160000
ZNF878   1160000 perm   712 sec   (1630 perm/sec)   p_kst 8.620690e-07   p_cons 1   p_joint 6.465517e-05

Joint ci ratio: 4.496400e-01	ci left: 5.042106e-05	ci right 8.035247e-05	k: 75	n:1170000
Cons ci ratio: 3.350422e-06	ci left: 9.999968e-01	ci right 1	k: 1170000	n:1170000
KS ci ratio: 2.771855e+00	ci left: 2.163915e-08	ci right 4.762079e-06	k: 1	n:1170000
ZNF878   1170000 perm   722 sec   (1620 perm/sec)   p_kst 8.547009e-07   p_cons 1   p_joint 6.410256e-05

Joint ci ratio: 4.496402e-01	ci left: 4.999376e-05	ci right 7.967152e-05	k: 75	n:1180000
Cons ci ratio: 3.322028e-06	ci left: 9.999969e-01	ci right 1	k: 1180000	n:1180000
KS ci ratio: 2.771855e+00	ci left: 2.145577e-08	ci right 4.721723e-06	k: 1	n:1180000
ZNF878   1180000 perm   733 sec   (1610 perm/sec)   p_kst 8.474576e-07   p_cons 1   p_joint 6.355932e-05

Joint ci ratio: 4.467108e-01	ci left: 5.031911e-05	ci right 7.993661e-05	k: 76	n:1190000
Cons ci ratio: 3.294112e-06	ci left: 9.999969e-01	ci right 1	k: 1190000	n:1190000
KS ci ratio: 2.771855e+00	ci left: 2.127547e-08	ci right 4.682044e-06	k: 1	n:1190000
ZNF878   1190000 perm   744 sec   (1599 perm/sec)   p_kst 8.403361e-07   p_cons 1   p_joint 6.386555e-05

Joint ci ratio: 4.467109e-01	ci left: 4.989978e-05	ci right 7.927048e-05	k: 76	n:1200000
Cons ci ratio: 3.266661e-06	ci left: 9.999969e-01	ci right 1	k: 1200000	n:1200000
KS ci ratio: 2.771855e+00	ci left: 2.109817e-08	ci right 4.643027e-06	k: 1	n:1200000
ZNF878   1200000 perm   755 sec   (1590 perm/sec)   p_kst 8.333333e-07   p_cons 1   p_joint 6.333333e-05

Joint ci ratio: 4.652046e-01	ci left: 4.509815e-05	ci right 7.309100e-05	k: 70	n:1210000
Cons ci ratio: 3.239664e-06	ci left: 9.999970e-01	ci right 1	k: 1210000	n:1210000
KS ci ratio: 2.771855e+00	ci left: 2.092381e-08	ci right 4.604655e-06	k: 1	n:1210000
ZNF878   1210000 perm   766 sec   (1579 perm/sec)   p_kst 8.264463e-07   p_cons 1   p_joint 5.785124e-05

Joint ci ratio: 4.753564e-01	ci left: 4.256097e-05	ci right 6.974344e-05	k: 67	n:1220000
Cons ci ratio: 3.213109e-06	ci left: 9.999970e-01	ci right 1	k: 1220000	n:1220000
KS ci ratio: 2.771855e+00	ci left: 2.075230e-08	ci right 4.566912e-06	k: 1	n:1220000
ZNF878   1220000 perm   777 sec   (1570 perm/sec)   p_kst 8.196721e-07   p_cons 1   p_joint 5.491803e-05

Joint ci ratio: 4.718991e-01	ci left: 4.293087e-05	ci right 7.008583e-05	k: 68	n:1230000
Cons ci ratio: 3.186987e-06	ci left: 9.999970e-01	ci right 1	k: 1230000	n:1230000
KS ci ratio: 2.771855e+00	ci left: 2.058358e-08	ci right 4.529783e-06	k: 1	n:1230000
ZNF878   1230000 perm   788 sec   (1561 perm/sec)   p_kst 8.130081e-07   p_cons 1   p_joint 5.528455e-05

Joint ci ratio: 4.685162e-01	ci left: 4.329551e-05	ci right 7.042199e-05	k: 69	n:1240000
Cons ci ratio: 3.161285e-06	ci left: 9.999970e-01	ci right 1	k: 1240000	n:1240000
KS ci ratio: 2.771855e+00	ci left: 2.041759e-08	ci right 4.493253e-06	k: 1	n:1240000
ZNF878   1240000 perm   799 sec   (1551 perm/sec)   p_kst 8.064516e-07   p_cons 1   p_joint 5.564516e-05

Joint ci ratio: 4.685163e-01	ci left: 4.294914e-05	ci right 6.985862e-05	k: 69	n:1250000
Cons ci ratio: 3.135995e-06	ci left: 9.999970e-01	ci right 1	k: 1250000	n:1250000
KS ci ratio: 2.771855e+00	ci left: 2.025425e-08	ci right 4.457307e-06	k: 1	n:1250000
ZNF878   1250000 perm   811 sec   (1542 perm/sec)   p_kst 8.000000e-07   p_cons 1   p_joint 5.520000e-05

Joint ci ratio: 4.652051e-01	ci left: 4.330853e-05	ci right 7.019059e-05	k: 70	n:1260000
Cons ci ratio: 3.111106e-06	ci left: 9.999971e-01	ci right 1	k: 1260000	n:1260000
KS ci ratio: 2.771855e+00	ci left: 2.009350e-08	ci right 4.421931e-06	k: 1	n:1260000
ZNF878   1260000 perm   822 sec   (1532 perm/sec)   p_kst 7.936508e-07   p_cons 1   p_joint 5.555556e-05

Joint ci ratio: 4.619632e-01	ci left: 4.366292e-05	ci right 7.051668e-05	k: 71	n:1270000
Cons ci ratio: 3.086609e-06	ci left: 9.999971e-01	ci right 1	k: 1270000	n:1270000
KS ci ratio: 2.771855e+00	ci left: 1.993528e-08	ci right 4.387113e-06	k: 1	n:1270000
ZNF878   1270000 perm   834 sec   (1523 perm/sec)   p_kst 7.874016e-07   p_cons 1   p_joint 5.590551e-05

Joint ci ratio: 4.587880e-01	ci left: 4.401241e-05	ci right 7.083705e-05	k: 72	n:1280000
Cons ci ratio: 3.062495e-06	ci left: 9.999971e-01	ci right 1	k: 1280000	n:1280000
KS ci ratio: 2.771855e+00	ci left: 1.977954e-08	ci right 4.352839e-06	k: 1	n:1280000
ZNF878   1280000 perm   846 sec   (1514 perm/sec)   p_kst 7.812500e-07   p_cons 1   p_joint 5.625000e-05

Joint ci ratio: 4.587881e-01	ci left: 4.367123e-05	ci right 7.028793e-05	k: 72	n:1290000
Cons ci ratio: 3.038755e-06	ci left: 9.999971e-01	ci right 1	k: 1290000	n:1290000
KS ci ratio: 2.771855e+00	ci left: 1.962621e-08	ci right 4.319096e-06	k: 1	n:1290000
ZNF878   1290000 perm   857 sec   (1505 perm/sec)   p_kst 7.751938e-07   p_cons 1   p_joint 5.581395e-05

Joint ci ratio: 4.587882e-01	ci left: 4.333529e-05	ci right 6.974726e-05	k: 72	n:1300000
Cons ci ratio: 3.015380e-06	ci left: 9.999972e-01	ci right 1	k: 1300000	n:1300000
KS ci ratio: 2.771855e+00	ci left: 1.947524e-08	ci right 4.285872e-06	k: 1	n:1300000
ZNF878   1300000 perm   869 sec   (1496 perm/sec)   p_kst 7.692308e-07   p_cons 1   p_joint 5.538462e-05

Joint ci ratio: 4.587883e-01	ci left: 4.300449e-05	ci right 6.921484e-05	k: 72	n:1310000
Cons ci ratio: 2.992362e-06	ci left: 9.999972e-01	ci right 1	k: 1310000	n:1310000
KS ci ratio: 2.771855e+00	ci left: 1.932657e-08	ci right 4.253155e-06	k: 1	n:1310000
ZNF878   1310000 perm   881 sec   (1487 perm/sec)   p_kst 7.633588e-07   p_cons 1   p_joint 5.496183e-05

Joint ci ratio: 4.587884e-01	ci left: 4.267870e-05	ci right 6.869049e-05	k: 72	n:1320000
Cons ci ratio: 2.969692e-06	ci left: 9.999972e-01	ci right 1	k: 1320000	n:1320000
KS ci ratio: 2.771855e+00	ci left: 1.918016e-08	ci right 4.220935e-06	k: 1	n:1320000
ZNF878   1320000 perm   893 sec   (1479 perm/sec)   p_kst 7.575758e-07   p_cons 1   p_joint 5.454545e-05

Joint ci ratio: 4.587885e-01	ci left: 4.235780e-05	ci right 6.817402e-05	k: 72	n:1330000
Cons ci ratio: 2.947364e-06	ci left: 9.999972e-01	ci right 1	k: 1330000	n:1330000
KS ci ratio: 2.771855e+00	ci left: 1.903595e-08	ci right 4.189198e-06	k: 1	n:1330000
ZNF878   1330000 perm   904 sec   (1471 perm/sec)   p_kst 7.518797e-07   p_cons 1   p_joint 5.413534e-05

Joint ci ratio: 4.652059e-01	ci left: 4.072293e-05	ci right 6.600013e-05	k: 70	n:1340000
Cons ci ratio: 2.925369e-06	ci left: 9.999972e-01	ci right 1	k: 1340000	n:1340000
KS ci ratio: 2.771855e+00	ci left: 1.889389e-08	ci right 4.157936e-06	k: 1	n:1340000
ZNF878   1340000 perm   916 sec   (1463 perm/sec)   p_kst 7.462687e-07   p_cons 1   p_joint 5.223881e-05

Joint ci ratio: 4.652060e-01	ci left: 4.042128e-05	ci right 6.551125e-05	k: 70	n:1350000
Cons ci ratio: 2.903699e-06	ci left: 9.999973e-01	ci right 1	k: 1350000	n:1350000
KS ci ratio: 2.771856e+00	ci left: 1.875393e-08	ci right 4.127136e-06	k: 1	n:1350000
ZNF878   1350000 perm   928 sec   (1455 perm/sec)   p_kst 7.407407e-07   p_cons 1   p_joint 5.185185e-05

Joint ci ratio: 4.619640e-01	ci left: 4.077345e-05	ci right 6.585017e-05	k: 71	n:1360000
Cons ci ratio: 2.882349e-06	ci left: 9.999973e-01	ci right 1	k: 1360000	n:1360000
KS ci ratio: 2.771856e+00	ci left: 1.861604e-08	ci right 4.096790e-06	k: 1	n:1360000
ZNF878   1360000 perm   940 sec   (1447 perm/sec)   p_kst 7.352941e-07   p_cons 1   p_joint 5.220588e-05

Joint ci ratio: 4.556783e-01	ci left: 4.176690e-05	ci right 6.699702e-05	k: 73	n:1370000
Cons ci ratio: 2.861310e-06	ci left: 9.999973e-01	ci right 1	k: 1370000	n:1370000
KS ci ratio: 2.771856e+00	ci left: 1.848015e-08	ci right 4.066886e-06	k: 1	n:1370000
ZNF878   1370000 perm   953 sec   (1438 perm/sec)   p_kst 7.299270e-07   p_cons 1   p_joint 5.328467e-05

Joint ci ratio: 4.652063e-01	ci left: 3.954255e-05	ci right 6.408710e-05	k: 70	n:1380000
Cons ci ratio: 2.840576e-06	ci left: 9.999973e-01	ci right 1	k: 1380000	n:1380000
KS ci ratio: 2.771856e+00	ci left: 1.834624e-08	ci right 4.037416e-06	k: 1	n:1380000
ZNF878   1380000 perm   965 sec   (1430 perm/sec)   p_kst 7.246377e-07   p_cons 1   p_joint 5.072464e-05

Joint ci ratio: 4.619643e-01	ci left: 3.989344e-05	ci right 6.442895e-05	k: 71	n:1390000
Cons ci ratio: 2.820140e-06	ci left: 9.999973e-01	ci right 1	k: 1390000	n:1390000
KS ci ratio: 2.771856e+00	ci left: 1.821425e-08	ci right 4.008370e-06	k: 1	n:1390000
ZNF878   1390000 perm   977 sec   (1422 perm/sec)   p_kst 7.194245e-07   p_cons 1   p_joint 5.107914e-05

Joint ci ratio: 4.619644e-01	ci left: 3.960848e-05	ci right 6.396875e-05	k: 71	n:1400000
Cons ci ratio: 2.799996e-06	ci left: 9.999974e-01	ci right 1	k: 1400000	n:1400000
KS ci ratio: 2.771856e+00	ci left: 1.808415e-08	ci right 3.979739e-06	k: 1	n:1400000
ZNF878   1400000 perm   990 sec   (1414 perm/sec)   p_kst 7.142857e-07   p_cons 1   p_joint 5.071429e-05

Joint ci ratio: 5.192060e-01	ci left: 3.000141e-05	ci right 5.157463e-05	k: 56	n:1410000
Cons ci ratio: 2.780138e-06	ci left: 9.999974e-01	ci right 1	k: 1410000	n:1410000
KS ci ratio: 2.771856e+00	ci left: 1.795589e-08	ci right 3.951514e-06	k: 1	n:1410000
ZNF878   1410000 perm   1003 sec   (1406 perm/sec)   p_kst 7.092199e-07   p_cons 1   p_joint 3.971631e-05

Joint ci ratio: 5.192061e-01	ci left: 2.979013e-05	ci right 5.121143e-05	k: 56	n:1420000
Cons ci ratio: 2.760559e-06	ci left: 9.999974e-01	ci right 1	k: 1420000	n:1420000
KS ci ratio: 2.771856e+00	ci left: 1.782944e-08	ci right 3.923686e-06	k: 1	n:1420000
ZNF878   1420000 perm   1015 sec   (1398 perm/sec)   p_kst 7.042254e-07   p_cons 1   p_joint 3.943662e-05

Joint ci ratio: 5.192062e-01	ci left: 2.958181e-05	ci right 5.085331e-05	k: 56	n:1430000
Cons ci ratio: 2.741255e-06	ci left: 9.999974e-01	ci right 1	k: 1430000	n:1430000
KS ci ratio: 2.771856e+00	ci left: 1.770476e-08	ci right 3.896248e-06	k: 1	n:1430000
ZNF878   1430000 perm   1028 sec   (1391 perm/sec)   p_kst 6.993007e-07   p_cons 1   p_joint 3.916084e-05

Joint ci ratio: 5.238217e-01	ci left: 2.877341e-05	ci right 4.971503e-05	k: 55	n:1440000
Cons ci ratio: 2.722218e-06	ci left: 9.999974e-01	ci right 1	k: 1440000	n:1440000
KS ci ratio: 2.771856e+00	ci left: 1.758181e-08	ci right 3.869191e-06	k: 1	n:1440000
ZNF878   1440000 perm   1041 sec   (1383 perm/sec)   p_kst 6.944444e-07   p_cons 1   p_joint 3.819444e-05

Joint ci ratio: 5.238217e-01	ci left: 2.857497e-05	ci right 4.937217e-05	k: 55	n:1450000
Cons ci ratio: 2.703445e-06	ci left: 9.999975e-01	ci right 1	k: 1450000	n:1450000
KS ci ratio: 2.771856e+00	ci left: 1.746056e-08	ci right 3.842507e-06	k: 1	n:1450000
ZNF878   1450000 perm   1054 sec   (1375 perm/sec)   p_kst 6.896552e-07   p_cons 1   p_joint 3.793103e-05

Joint ci ratio: 5.238218e-01	ci left: 2.837925e-05	ci right 4.903401e-05	k: 55	n:1460000
Cons ci ratio: 2.684928e-06	ci left: 9.999975e-01	ci right 1	k: 1460000	n:1460000
KS ci ratio: 2.771856e+00	ci left: 1.734096e-08	ci right 3.816188e-06	k: 1	n:1460000
ZNF878   1460000 perm   1067 sec   (1368 perm/sec)   p_kst 6.849315e-07   p_cons 1   p_joint 3.767123e-05

Joint ci ratio: 5.285626e-01	ci left: 2.759635e-05	ci right 4.793054e-05	k: 54	n:1470000
Cons ci ratio: 2.666663e-06	ci left: 9.999975e-01	ci right 1	k: 1470000	n:1470000
KS ci ratio: 2.771856e+00	ci left: 1.722300e-08	ci right 3.790228e-06	k: 1	n:1470000
ZNF878   1470000 perm   1080 sec   (1361 perm/sec)   p_kst 6.802721e-07   p_cons 1   p_joint 3.673469e-05

Joint ci ratio: 5.285627e-01	ci left: 2.740989e-05	ci right 4.760669e-05	k: 54	n:1480000
Cons ci ratio: 2.648645e-06	ci left: 9.999975e-01	ci right 1	k: 1480000	n:1480000
KS ci ratio: 2.771856e+00	ci left: 1.710663e-08	ci right 3.764618e-06	k: 1	n:1480000
ZNF878   1480000 perm   1094 sec   (1353 perm/sec)   p_kst 6.756757e-07   p_cons 1   p_joint 3.648649e-05

Joint ci ratio: 5.238220e-01	ci left: 2.780785e-05	ci right 4.804675e-05	k: 55	n:1490000
Cons ci ratio: 2.630869e-06	ci left: 9.999975e-01	ci right 1	k: 1490000	n:1490000
KS ci ratio: 2.771856e+00	ci left: 1.699182e-08	ci right 3.739352e-06	k: 1	n:1490000
ZNF878   1490000 perm   1107 sec   (1346 perm/sec)   p_kst 6.711409e-07   p_cons 1   p_joint 3.691275e-05

Joint ci ratio: 5.238221e-01	ci left: 2.762247e-05	ci right 4.772644e-05	k: 55	n:1500000
Cons ci ratio: 2.613330e-06	ci left: 9.999975e-01	ci right 1	k: 1500000	n:1500000
KS ci ratio: 2.771856e+00	ci left: 1.687854e-08	ci right 3.714423e-06	k: 1	n:1500000
ZNF878   1500000 perm   1121 sec   (1339 perm/sec)   p_kst 6.666667e-07   p_cons 1   p_joint 3.666667e-05

Joint ci ratio: 5.192067e-01	ci left: 2.801455e-05	ci right 4.815911e-05	k: 56	n:1510000
Cons ci ratio: 2.596023e-06	ci left: 9.999976e-01	ci right 1	k: 1510000	n:1510000
KS ci ratio: 2.771856e+00	ci left: 1.676676e-08	ci right 3.689824e-06	k: 1	n:1510000
ZNF878   1510000 perm   1134 sec   (1332 perm/sec)   p_kst 6.622517e-07   p_cons 1   p_joint 3.708609e-05

Joint ci ratio: 5.192068e-01	ci left: 2.783025e-05	ci right 4.784228e-05	k: 56	n:1520000
Cons ci ratio: 2.578944e-06	ci left: 9.999976e-01	ci right 1	k: 1520000	n:1520000
KS ci ratio: 2.771856e+00	ci left: 1.665645e-08	ci right 3.665549e-06	k: 1	n:1520000
ZNF878   1520000 perm   1147 sec   (1325 perm/sec)   p_kst 6.578947e-07   p_cons 1   p_joint 3.684211e-05

Joint ci ratio: 5.192068e-01	ci left: 2.764835e-05	ci right 4.752958e-05	k: 56	n:1530000
Cons ci ratio: 2.562088e-06	ci left: 9.999976e-01	ci right 1	k: 1530000	n:1530000
KS ci ratio: 2.771856e+00	ci left: 1.654759e-08	ci right 3.641592e-06	k: 1	n:1530000
ZNF878   1530000 perm   1161 sec   (1318 perm/sec)   p_kst 6.535948e-07   p_cons 1   p_joint 3.660131e-05

Joint ci ratio: 5.147114e-01	ci left: 2.803339e-05	ci right 4.795436e-05	k: 57	n:1540000
Cons ci ratio: 2.545451e-06	ci left: 9.999976e-01	ci right 1	k: 1540000	n:1540000
KS ci ratio: 2.771856e+00	ci left: 1.644014e-08	ci right 3.617945e-06	k: 1	n:1540000
ZNF878   1540000 perm   1175 sec   (1311 perm/sec)   p_kst 6.493506e-07   p_cons 1   p_joint 3.701299e-05

Joint ci ratio: 5.147114e-01	ci left: 2.785253e-05	ci right 4.764497e-05	k: 57	n:1550000
Cons ci ratio: 2.529029e-06	ci left: 9.999976e-01	ci right 1	k: 1550000	n:1550000
KS ci ratio: 2.771856e+00	ci left: 1.633407e-08	ci right 3.594603e-06	k: 1	n:1550000
ZNF878   1550000 perm   1189 sec   (1303 perm/sec)   p_kst 6.451613e-07   p_cons 1   p_joint 3.677419e-05

Joint ci ratio: 5.147115e-01	ci left: 2.767399e-05	ci right 4.733956e-05	k: 57	n:1560000
Cons ci ratio: 2.512817e-06	ci left: 9.999976e-01	ci right 1	k: 1560000	n:1560000
KS ci ratio: 2.771856e+00	ci left: 1.622936e-08	ci right 3.571561e-06	k: 1	n:1560000
ZNF878   1560000 perm   1203 sec   (1297 perm/sec)   p_kst 6.410256e-07   p_cons 1   p_joint 3.653846e-05

Joint ci ratio: 5.103308e-01	ci left: 2.805224e-05	ci right 4.775672e-05	k: 58	n:1570000
Cons ci ratio: 2.496812e-06	ci left: 9.999977e-01	ci right 1	k: 1570000	n:1570000
KS ci ratio: 2.771856e+00	ci left: 1.612599e-08	ci right 3.548812e-06	k: 1	n:1570000
ZNF878   1570000 perm   1217 sec   (1290 perm/sec)   p_kst 6.369427e-07   p_cons 1   p_joint 3.694268e-05

Joint ci ratio: 5.147116e-01	ci left: 2.732368e-05	ci right 4.674033e-05	k: 57	n:1580000
Cons ci ratio: 2.481010e-06	ci left: 9.999977e-01	ci right 1	k: 1580000	n:1580000
KS ci ratio: 2.771856e+00	ci left: 1.602393e-08	ci right 3.526351e-06	k: 1	n:1580000
ZNF878   1580000 perm   1231 sec   (1283 perm/sec)   p_kst 6.329114e-07   p_cons 1   p_joint 3.607595e-05

Joint ci ratio: 5.103309e-01	ci left: 2.769938e-05	ci right 4.715601e-05	k: 58	n:1590000
Cons ci ratio: 2.465406e-06	ci left: 9.999977e-01	ci right 1	k: 1590000	n:1590000
KS ci ratio: 2.771856e+00	ci left: 1.592315e-08	ci right 3.504173e-06	k: 1	n:1590000
ZNF878   1590000 perm   1246 sec   (1276 perm/sec)   p_kst 6.289308e-07   p_cons 1   p_joint 3.647799e-05

Joint ci ratio: 5.103310e-01	ci left: 2.752626e-05	ci right 4.686128e-05	k: 58	n:1600000
Cons ci ratio: 2.449997e-06	ci left: 9.999977e-01	ci right 1	k: 1600000	n:1600000
KS ci ratio: 2.771856e+00	ci left: 1.582363e-08	ci right 3.482272e-06	k: 1	n:1600000
ZNF878   1600000 perm   1260 sec   (1270 perm/sec)   p_kst 6.250000e-07   p_cons 1   p_joint 3.625000e-05

Joint ci ratio: 5.103310e-01	ci left: 2.735529e-05	ci right 4.657022e-05	k: 58	n:1610000
Cons ci ratio: 2.434780e-06	ci left: 9.999977e-01	ci right 1	k: 1610000	n:1610000
KS ci ratio: 2.771856e+00	ci left: 1.572535e-08	ci right 3.460643e-06	k: 1	n:1610000
ZNF878   1610000 perm   1275 sec   (1263 perm/sec)   p_kst 6.211180e-07   p_cons 1   p_joint 3.602484e-05

Joint ci ratio: 5.060603e-01	ci left: 2.772452e-05	ci right 4.697858e-05	k: 59	n:1620000
Cons ci ratio: 2.419750e-06	ci left: 9.999977e-01	ci right 1	k: 1620000	n:1620000
KS ci ratio: 2.771856e+00	ci left: 1.562828e-08	ci right 3.439281e-06	k: 1	n:1620000
ZNF878   1620000 perm   1289 sec   (1257 perm/sec)   p_kst 6.172840e-07   p_cons 1   p_joint 3.641975e-05

Joint ci ratio: 5.060604e-01	ci left: 2.755443e-05	ci right 4.669037e-05	k: 59	n:1630000
Cons ci ratio: 2.404905e-06	ci left: 9.999977e-01	ci right 1	k: 1630000	n:1630000
KS ci ratio: 2.771856e+00	ci left: 1.553240e-08	ci right 3.418181e-06	k: 1	n:1630000
ZNF878   1630000 perm   1304 sec   (1250 perm/sec)   p_kst 6.134969e-07   p_cons 1   p_joint 3.619632e-05

Joint ci ratio: 5.018951e-01	ci left: 2.791860e-05	ci right 4.709237e-05	k: 60	n:1640000
Cons ci ratio: 2.390241e-06	ci left: 9.999978e-01	ci right 1	k: 1640000	n:1640000
KS ci ratio: 2.771856e+00	ci left: 1.543769e-08	ci right 3.397339e-06	k: 1	n:1640000
ZNF878   1640000 perm   1319 sec   (1243 perm/sec)   p_kst 6.097561e-07   p_cons 1   p_joint 3.658537e-05

Joint ci ratio: 4.978310e-01	ci left: 2.827900e-05	ci right 4.748887e-05	k: 61	n:1650000
Cons ci ratio: 2.375755e-06	ci left: 9.999978e-01	ci right 1	k: 1650000	n:1650000
KS ci ratio: 2.771856e+00	ci left: 1.534413e-08	ci right 3.376749e-06	k: 1	n:1650000
ZNF878   1650000 perm   1334 sec   (1236 perm/sec)   p_kst 6.060606e-07   p_cons 1   p_joint 3.696970e-05

Joint ci ratio: 4.978311e-01	ci left: 2.810865e-05	ci right 4.720280e-05	k: 61	n:1660000
Cons ci ratio: 2.361443e-06	ci left: 9.999978e-01	ci right 1	k: 1660000	n:1660000
KS ci ratio: 2.771856e+00	ci left: 1.525169e-08	ci right 3.356407e-06	k: 1	n:1660000
ZNF878   1660000 perm   1350 sec   (1230 perm/sec)   p_kst 6.024096e-07   p_cons 1   p_joint 3.674699e-05

Joint ci ratio: 4.899905e-01	ci left: 2.898870e-05	ci right 4.826583e-05	k: 63	n:1670000
Cons ci ratio: 2.347303e-06	ci left: 9.999978e-01	ci right 1	k: 1670000	n:1670000
KS ci ratio: 2.771856e+00	ci left: 1.516036e-08	ci right 3.336309e-06	k: 1	n:1670000
ZNF878   1670000 perm   1365 sec   (1224 perm/sec)   p_kst 5.988024e-07   p_cons 1   p_joint 3.772455e-05

Joint ci ratio: 4.899905e-01	ci left: 2.881615e-05	ci right 4.797854e-05	k: 63	n:1680000
Cons ci ratio: 2.333331e-06	ci left: 9.999978e-01	ci right 1	k: 1680000	n:1680000
KS ci ratio: 2.771856e+00	ci left: 1.507012e-08	ci right 3.316450e-06	k: 1	n:1680000
ZNF878   1680000 perm   1380 sec   (1217 perm/sec)   p_kst 5.952381e-07   p_cons 1   p_joint 3.750000e-05

Joint ci ratio: 4.899906e-01	ci left: 2.864564e-05	ci right 4.769464e-05	k: 63	n:1690000
Cons ci ratio: 2.319524e-06	ci left: 9.999978e-01	ci right 1	k: 1690000	n:1690000
KS ci ratio: 2.771856e+00	ci left: 1.498095e-08	ci right 3.296826e-06	k: 1	n:1690000
ZNF878   1690000 perm   1396 sec   (1210 perm/sec)   p_kst 5.917160e-07   p_cons 1   p_joint 3.727811e-05

Joint ci ratio: 4.899906e-01	ci left: 2.847713e-05	ci right 4.741409e-05	k: 63	n:1700000
Cons ci ratio: 2.305880e-06	ci left: 9.999978e-01	ci right 1	k: 1700000	n:1700000
KS ci ratio: 2.771856e+00	ci left: 1.489283e-08	ci right 3.277433e-06	k: 1	n:1700000
ZNF878   1700000 perm   1412 sec   (1204 perm/sec)   p_kst 5.882353e-07   p_cons 1   p_joint 3.705882e-05

Joint ci ratio: 4.899907e-01	ci left: 2.831060e-05	ci right 4.713681e-05	k: 63	n:1710000
Cons ci ratio: 2.292395e-06	ci left: 9.999978e-01	ci right 1	k: 1710000	n:1710000
KS ci ratio: 2.771856e+00	ci left: 1.480574e-08	ci right 3.258267e-06	k: 1	n:1710000
ZNF878   1710000 perm   1428 sec   (1197 perm/sec)   p_kst 5.847953e-07   p_cons 1   p_joint 3.684211e-05

Joint ci ratio: 5.060608e-01	ci left: 2.611262e-05	ci right 4.424728e-05	k: 59	n:1720000
Cons ci ratio: 2.279067e-06	ci left: 9.999979e-01	ci right 1	k: 1720000	n:1720000
KS ci ratio: 2.771856e+00	ci left: 1.471966e-08	ci right 3.239323e-06	k: 1	n:1720000
ZNF878   1720000 perm   1444 sec   (1191 perm/sec)   p_kst 5.813953e-07   p_cons 1   p_joint 3.430233e-05

Joint ci ratio: 5.018956e-01	ci left: 2.646618e-05	ci right 4.464249e-05	k: 60	n:1730000
Cons ci ratio: 2.265893e-06	ci left: 9.999979e-01	ci right 1	k: 1730000	n:1730000
KS ci ratio: 2.771856e+00	ci left: 1.463457e-08	ci right 3.220599e-06	k: 1	n:1730000
ZNF878   1730000 perm   1460 sec   (1185 perm/sec)   p_kst 5.780347e-07   p_cons 1   p_joint 3.468208e-05

Joint ci ratio: 5.018956e-01	ci left: 2.631408e-05	ci right 4.438593e-05	k: 60	n:1740000
Cons ci ratio: 2.252871e-06	ci left: 9.999979e-01	ci right 1	k: 1740000	n:1740000
KS ci ratio: 2.771856e+00	ci left: 1.455046e-08	ci right 3.202090e-06	k: 1	n:1740000
ZNF878   1740000 perm   1476 sec   (1179 perm/sec)   p_kst 5.747126e-07   p_cons 1   p_joint 3.448276e-05

Joint ci ratio: 4.978315e-01	ci left: 2.666305e-05	ci right 4.477524e-05	k: 61	n:1750000
Cons ci ratio: 2.239997e-06	ci left: 9.999979e-01	ci right 1	k: 1750000	n:1750000
KS ci ratio: 2.771856e+00	ci left: 1.446732e-08	ci right 3.183792e-06	k: 1	n:1750000
ZNF878   1750000 perm   1493 sec   (1172 perm/sec)   p_kst 5.714286e-07   p_cons 1   p_joint 3.485714e-05

Joint ci ratio: 4.978316e-01	ci left: 2.651156e-05	ci right 4.452083e-05	k: 61	n:1760000
Cons ci ratio: 2.227270e-06	ci left: 9.999979e-01	ci right 1	k: 1760000	n:1760000
KS ci ratio: 2.771856e+00	ci left: 1.438512e-08	ci right 3.165702e-06	k: 1	n:1760000
ZNF878   1760000 perm   1509 sec   (1166 perm/sec)   p_kst 5.681818e-07   p_cons 1   p_joint 3.465909e-05

Joint ci ratio: 4.978316e-01	ci left: 2.636178e-05	ci right 4.426930e-05	k: 61	n:1770000
Cons ci ratio: 2.214687e-06	ci left: 9.999979e-01	ci right 1	k: 1770000	n:1770000
KS ci ratio: 2.771856e+00	ci left: 1.430385e-08	ci right 3.147817e-06	k: 1	n:1770000
ZNF878   1770000 perm   1526 sec   (1160 perm/sec)   p_kst 5.649718e-07   p_cons 1   p_joint 3.446328e-05

Joint ci ratio: 4.978317e-01	ci left: 2.621367e-05	ci right 4.402060e-05	k: 61	n:1780000
Cons ci ratio: 2.202245e-06	ci left: 9.999979e-01	ci right 1	k: 1780000	n:1780000
KS ci ratio: 2.771856e+00	ci left: 1.422349e-08	ci right 3.130133e-06	k: 1	n:1780000
ZNF878   1780000 perm   1543 sec   (1154 perm/sec)   p_kst 5.617978e-07   p_cons 1   p_joint 3.426966e-05

Joint ci ratio: 4.938647e-01	ci left: 2.655599e-05	ci right 4.440269e-05	k: 62	n:1790000
Cons ci ratio: 2.189942e-06	ci left: 9.999979e-01	ci right 1	k: 1790000	n:1790000
KS ci ratio: 2.771856e+00	ci left: 1.414403e-08	ci right 3.112646e-06	k: 1	n:1790000
ZNF878   1790000 perm   1560 sec   (1148 perm/sec)   p_kst 5.586592e-07   p_cons 1   p_joint 3.463687e-05

Joint ci ratio: 4.899912e-01	ci left: 2.689506e-05	ci right 4.477999e-05	k: 63	n:1800000
Cons ci ratio: 2.177775e-06	ci left: 9.999980e-01	ci right 1	k: 1800000	n:1800000
KS ci ratio: 2.771856e+00	ci left: 1.406545e-08	ci right 3.095354e-06	k: 1	n:1800000
ZNF878   1800000 perm   1577 sec   (1142 perm/sec)   p_kst 5.555556e-07   p_cons 1   p_joint 3.500000e-05

Joint ci ratio: 4.899912e-01	ci left: 2.674647e-05	ci right 4.453258e-05	k: 63	n:1810000
Cons ci ratio: 2.165743e-06	ci left: 9.999980e-01	ci right 1	k: 1810000	n:1810000
KS ci ratio: 2.771856e+00	ci left: 1.398774e-08	ci right 3.078252e-06	k: 1	n:1810000
ZNF878   1810000 perm   1594 sec   (1136 perm/sec)   p_kst 5.524862e-07   p_cons 1   p_joint 3.480663e-05

Joint ci ratio: 4.899912e-01	ci left: 2.659951e-05	ci right 4.428790e-05	k: 63	n:1820000
Cons ci ratio: 2.153844e-06	ci left: 9.999980e-01	ci right 1	k: 1820000	n:1820000
KS ci ratio: 2.771856e+00	ci left: 1.391088e-08	ci right 3.061339e-06	k: 1	n:1820000
ZNF878   1820000 perm   1610 sec   (1130 perm/sec)   p_kst 5.494505e-07   p_cons 1   p_joint 3.461538e-05

Joint ci ratio: 4.862074e-01	ci left: 2.693332e-05	ci right 4.465911e-05	k: 64	n:1830000
Cons ci ratio: 2.142074e-06	ci left: 9.999980e-01	ci right 1	k: 1830000	n:1830000
KS ci ratio: 2.771856e+00	ci left: 1.383487e-08	ci right 3.044610e-06	k: 1	n:1830000
ZNF878   1830000 perm   1627 sec   (1125 perm/sec)   p_kst 5.464481e-07   p_cons 1   p_joint 3.497268e-05

Joint ci ratio: 4.862074e-01	ci left: 2.678695e-05	ci right 4.441640e-05	k: 64	n:1840000
Cons ci ratio: 2.130432e-06	ci left: 9.999980e-01	ci right 1	k: 1840000	n:1840000
KS ci ratio: 2.771856e+00	ci left: 1.375968e-08	ci right 3.028063e-06	k: 1	n:1840000
ZNF878   1840000 perm   1645 sec   (1119 perm/sec)   p_kst 5.434783e-07   p_cons 1   p_joint 3.478261e-05

Joint ci ratio: 4.862075e-01	ci left: 2.664215e-05	ci right 4.417631e-05	k: 64	n:1850000
Cons ci ratio: 2.118917e-06	ci left: 9.999980e-01	ci right 1	k: 1850000	n:1850000
KS ci ratio: 2.771856e+00	ci left: 1.368530e-08	ci right 3.011695e-06	k: 1	n:1850000
ZNF878   1850000 perm   1662 sec   (1113 perm/sec)   p_kst 5.405405e-07   p_cons 1   p_joint 3.459459e-05

Joint ci ratio: 4.862075e-01	ci left: 2.649891e-05	ci right 4.393881e-05	k: 64	n:1860000
Cons ci ratio: 2.107525e-06	ci left: 9.999980e-01	ci right 1	k: 1860000	n:1860000
KS ci ratio: 2.771856e+00	ci left: 1.361172e-08	ci right 2.995504e-06	k: 1	n:1860000
ZNF878   1860000 perm   1679 sec   (1108 perm/sec)   p_kst 5.376344e-07   p_cons 1   p_joint 3.440860e-05

Joint ci ratio: 5.018962e-01	ci left: 2.448475e-05	ci right 4.130029e-05	k: 60	n:1870000
Cons ci ratio: 2.096254e-06	ci left: 9.999980e-01	ci right 1	k: 1870000	n:1870000
KS ci ratio: 2.771856e+00	ci left: 1.353893e-08	ci right 2.979485e-06	k: 1	n:1870000
ZNF878   1870000 perm   1696 sec   (1103 perm/sec)   p_kst 5.347594e-07   p_cons 1   p_joint 3.208556e-05

Joint ci ratio: 5.018963e-01	ci left: 2.435451e-05	ci right 4.108061e-05	k: 60	n:1880000
Cons ci ratio: 2.085104e-06	ci left: 9.999980e-01	ci right 1	k: 1880000	n:1880000
KS ci ratio: 2.771856e+00	ci left: 1.346692e-08	ci right 2.963636e-06	k: 1	n:1880000
ZNF878   1880000 perm   1713 sec   (1098 perm/sec)   p_kst 5.319149e-07   p_cons 1   p_joint 3.191489e-05

Joint ci ratio: 4.938652e-01	ci left: 2.515091e-05	ci right 4.205335e-05	k: 62	n:1890000
Cons ci ratio: 2.074072e-06	ci left: 9.999980e-01	ci right 1	k: 1890000	n:1890000
KS ci ratio: 2.771856e+00	ci left: 1.339567e-08	ci right 2.947956e-06	k: 1	n:1890000
ZNF878   1890000 perm   1730 sec   (1092 perm/sec)   p_kst 5.291005e-07   p_cons 1   p_joint 3.280423e-05

Joint ci ratio: 5.543643e-01	ci left: 1.907925e-05	ci right 3.409491e-05	k: 49	n:1900000
Cons ci ratio: 2.063156e-06	ci left: 9.999981e-01	ci right 1	k: 1900000	n:1900000
KS ci ratio: 2.771856e+00	ci left: 1.332516e-08	ci right 2.932440e-06	k: 1	n:1900000
ZNF878   1900000 perm   1747 sec   (1087 perm/sec)   p_kst 5.263158e-07   p_cons 1   p_joint 2.578947e-05

Joint ci ratio: 5.543643e-01	ci left: 1.897936e-05	ci right 3.391640e-05	k: 49	n:1910000
Cons ci ratio: 2.052354e-06	ci left: 9.999981e-01	ci right 1	k: 1910000	n:1910000
KS ci ratio: 2.771856e+00	ci left: 1.325540e-08	ci right 2.917087e-06	k: 1	n:1910000
ZNF878   1910000 perm   1765 sec   (1082 perm/sec)   p_kst 5.235602e-07   p_cons 1   p_joint 2.565445e-05

Joint ci ratio: 5.543644e-01	ci left: 1.888051e-05	ci right 3.373976e-05	k: 49	n:1920000
Cons ci ratio: 2.041665e-06	ci left: 9.999981e-01	ci right 1	k: 1920000	n:1920000
KS ci ratio: 2.771856e+00	ci left: 1.318636e-08	ci right 2.901894e-06	k: 1	n:1920000
ZNF878   1920000 perm   1783 sec   (1077 perm/sec)   p_kst 5.208333e-07   p_cons 1   p_joint 2.552083e-05

Joint ci ratio: 5.543644e-01	ci left: 1.878268e-05	ci right 3.356494e-05	k: 49	n:1930000
Cons ci ratio: 2.031086e-06	ci left: 9.999981e-01	ci right 1	k: 1930000	n:1930000
KS ci ratio: 2.771856e+00	ci left: 1.311804e-08	ci right 2.886858e-06	k: 1	n:1930000
ZNF878   1930000 perm   1801 sec   (1072 perm/sec)   p_kst 5.181347e-07   p_cons 1   p_joint 2.538860e-05

Joint ci ratio: 5.489024e-01	ci left: 1.912942e-05	ci right 3.397861e-05	k: 50	n:1940000
Cons ci ratio: 2.020616e-06	ci left: 9.999981e-01	ci right 1	k: 1940000	n:1940000
KS ci ratio: 2.771856e+00	ci left: 1.305042e-08	ci right 2.871978e-06	k: 1	n:1940000
ZNF878   1940000 perm   1820 sec   (1066 perm/sec)   p_kst 5.154639e-07   p_cons 1   p_joint 2.577320e-05

Joint ci ratio: 5.599928e-01	ci left: 1.814950e-05	ci right 3.263630e-05	k: 48	n:1950000
Cons ci ratio: 2.010254e-06	ci left: 9.999981e-01	ci right 1	k: 1950000	n:1950000
KS ci ratio: 2.771856e+00	ci left: 1.298349e-08	ci right 2.857250e-06	k: 1	n:1950000
ZNF878   1950000 perm   1839 sec   (1060 perm/sec)   p_kst 5.128205e-07   p_cons 1   p_joint 2.461538e-05

Joint ci ratio: 5.489025e-01	ci left: 1.893422e-05	ci right 3.363189e-05	k: 50	n:1960000
Cons ci ratio: 1.999998e-06	ci left: 9.999981e-01	ci right 1	k: 1960000	n:1960000
KS ci ratio: 2.771856e+00	ci left: 1.291725e-08	ci right 2.842672e-06	k: 1	n:1960000
ZNF878   1960000 perm   1858 sec   (1055 perm/sec)   p_kst 5.102041e-07   p_cons 1   p_joint 2.551020e-05

Joint ci ratio: 5.489025e-01	ci left: 1.883811e-05	ci right 3.346117e-05	k: 50	n:1970000
Cons ci ratio: 1.989846e-06	ci left: 9.999981e-01	ci right 1	k: 1970000	n:1970000
KS ci ratio: 2.771856e+00	ci left: 1.285168e-08	ci right 2.828242e-06	k: 1	n:1970000
ZNF878   1970000 perm   1877 sec   (1050 perm/sec)   p_kst 5.076142e-07   p_cons 1   p_joint 2.538071e-05

Joint ci ratio: 5.489026e-01	ci left: 1.874297e-05	ci right 3.329217e-05	k: 50	n:1980000
Cons ci ratio: 1.979796e-06	ci left: 9.999981e-01	ci right 1	k: 1980000	n:1980000
KS ci ratio: 2.771856e+00	ci left: 1.278677e-08	ci right 2.813958e-06	k: 1	n:1980000
ZNF878   1980000 perm   1895 sec   (1045 perm/sec)   p_kst 5.050505e-07   p_cons 1   p_joint 2.525253e-05

Joint ci ratio: 5.489026e-01	ci left: 1.864878e-05	ci right 3.312488e-05	k: 50	n:1990000
Cons ci ratio: 1.969847e-06	ci left: 9.999981e-01	ci right 1	k: 1990000	n:1990000
KS ci ratio: 2.771856e+00	ci left: 1.272252e-08	ci right 2.799818e-06	k: 1	n:1990000
ZNF878   1990000 perm   1916 sec   (1039 perm/sec)   p_kst 5.025126e-07   p_cons 1   p_joint 2.512563e-05

Joint ci ratio: 5.489027e-01	ci left: 1.855554e-05	ci right 3.295925e-05	k: 50	n:2000000
Cons ci ratio: 1.959998e-06	ci left: 9.999982e-01	ci right 1	k: 2000000	n:2000000
KS ci ratio: 2.771857e+00	ci left: 1.265890e-08	ci right 2.785819e-06	k: 1	n:2000000
ZNF878   2000000 perm   1936 sec   (1033 perm/sec)   p_kst 5.000000e-07   p_cons 1   p_joint 2.500000e-05

Joint ci ratio: 5.489027e-01	ci left: 1.846322e-05	ci right 3.279528e-05	k: 50	n:2010000
Cons ci ratio: 1.950247e-06	ci left: 9.999982e-01	ci right 1	k: 2010000	n:2010000
KS ci ratio: 2.771857e+00	ci left: 1.259592e-08	ci right 2.771959e-06	k: 1	n:2010000
ZNF878   2010000 perm   1955 sec   (1028 perm/sec)   p_kst 4.975124e-07   p_cons 1   p_joint 2.487562e-05

Joint ci ratio: 5.489027e-01	ci left: 1.837182e-05	ci right 3.263292e-05	k: 50	n:2020000
Cons ci ratio: 1.940592e-06	ci left: 9.999982e-01	ci right 1	k: 2020000	n:2020000
KS ci ratio: 2.771857e+00	ci left: 1.253357e-08	ci right 2.758236e-06	k: 1	n:2020000
ZNF878   2020000 perm   1974 sec   (1023 perm/sec)   p_kst 4.950495e-07   p_cons 1   p_joint 2.475248e-05

Joint ci ratio: 5.435991e-01	ci left: 1.870589e-05	ci right 3.303218e-05	k: 51	n:2030000
Cons ci ratio: 1.931033e-06	ci left: 9.999982e-01	ci right 1	k: 2030000	n:2030000
KS ci ratio: 2.771857e+00	ci left: 1.247183e-08	ci right 2.744649e-06	k: 1	n:2030000
ZNF878   2030000 perm   1993 sec   (1018 perm/sec)   p_kst 4.926108e-07   p_cons 1   p_joint 2.512315e-05

Joint ci ratio: 5.435991e-01	ci left: 1.861420e-05	ci right 3.287025e-05	k: 51	n:2040000
Cons ci ratio: 1.921567e-06	ci left: 9.999982e-01	ci right 1	k: 2040000	n:2040000
KS ci ratio: 2.771857e+00	ci left: 1.241069e-08	ci right 2.731195e-06	k: 1	n:2040000
ZNF878   2040000 perm   2012 sec   (1014 perm/sec)   p_kst 4.901961e-07   p_cons 1   p_joint 2.500000e-05

Joint ci ratio: 5.435992e-01	ci left: 1.852340e-05	ci right 3.270991e-05	k: 51	n:2050000
Cons ci ratio: 1.912193e-06	ci left: 9.999982e-01	ci right 1	k: 2050000	n:2050000
KS ci ratio: 2.771857e+00	ci left: 1.235015e-08	ci right 2.717872e-06	k: 1	n:2050000
ZNF878   2050000 perm   2032 sec   (1009 perm/sec)   p_kst 4.878049e-07   p_cons 1   p_joint 2.487805e-05

Joint ci ratio: 5.384464e-01	ci left: 1.885253e-05	ci right 3.310234e-05	k: 52	n:2060000
Cons ci ratio: 1.902911e-06	ci left: 9.999982e-01	ci right 1	k: 2060000	n:2060000
KS ci ratio: 2.771857e+00	ci left: 1.229020e-08	ci right 2.704678e-06	k: 1	n:2060000
ZNF878   2060000 perm   2051 sec   (1004 perm/sec)   p_kst 4.854369e-07   p_cons 1   p_joint 2.524272e-05

Joint ci ratio: 5.384464e-01	ci left: 1.876145e-05	ci right 3.294242e-05	k: 52	n:2070000
Cons ci ratio: 1.893718e-06	ci left: 9.999982e-01	ci right 1	k: 2070000	n:2070000
KS ci ratio: 2.771857e+00	ci left: 1.223083e-08	ci right 2.691612e-06	k: 1	n:2070000
ZNF878   2070000 perm   2071 sec   (1000 perm/sec)   p_kst 4.830918e-07   p_cons 1   p_joint 2.512077e-05

Joint ci ratio: 5.334374e-01	ci left: 1.908690e-05	ci right 3.332934e-05	k: 53	n:2080000
Cons ci ratio: 1.884614e-06	ci left: 9.999982e-01	ci right 1	k: 2080000	n:2080000
KS ci ratio: 2.771857e+00	ci left: 1.217202e-08	ci right 2.678672e-06	k: 1	n:2080000
ZNF878   2080000 perm   2090 sec   (995 perm/sec)   p_kst 4.807692e-07   p_cons 1   p_joint 2.548077e-05

Joint ci ratio: 5.285656e-01	ci left: 1.940985e-05	ci right 3.371197e-05	k: 54	n:2090000
Cons ci ratio: 1.875596e-06	ci left: 9.999982e-01	ci right 1	k: 2090000	n:2090000
KS ci ratio: 2.771857e+00	ci left: 1.211378e-08	ci right 2.665855e-06	k: 1	n:2090000
ZNF878   2090000 perm   2109 sec   (991 perm/sec)   p_kst 4.784689e-07   p_cons 1   p_joint 2.583732e-05

Joint ci ratio: 5.285656e-01	ci left: 1.931742e-05	ci right 3.355143e-05	k: 54	n:2100000
Cons ci ratio: 1.866665e-06	ci left: 9.999982e-01	ci right 1	k: 2100000	n:2100000
KS ci ratio: 2.771857e+00	ci left: 1.205610e-08	ci right 2.653161e-06	k: 1	n:2100000
ZNF878   2100000 perm   2128 sec   (987 perm/sec)   p_kst 4.761905e-07   p_cons 1   p_joint 2.571429e-05

Joint ci ratio: 5.238250e-01	ci left: 1.963680e-05	ci right 3.392880e-05	k: 55	n:2110000
Cons ci ratio: 1.857818e-06	ci left: 9.999983e-01	ci right 1	k: 2110000	n:2110000
KS ci ratio: 2.771857e+00	ci left: 1.199896e-08	ci right 2.640586e-06	k: 1	n:2110000
ZNF878   2110000 perm   2147 sec   (983 perm/sec)   p_kst 4.739336e-07   p_cons 1   p_joint 2.606635e-05

Joint ci ratio: 5.192096e-01	ci left: 1.995374e-05	ci right 3.430206e-05	k: 56	n:2120000
Cons ci ratio: 1.849055e-06	ci left: 9.999983e-01	ci right 1	k: 2120000	n:2120000
KS ci ratio: 2.771857e+00	ci left: 1.194236e-08	ci right 2.628131e-06	k: 1	n:2120000
ZNF878   2120000 perm   2167 sec   (978 perm/sec)   p_kst 4.716981e-07   p_cons 1   p_joint 2.641509e-05

Joint ci ratio: 5.147141e-01	ci left: 2.026825e-05	ci right 3.467128e-05	k: 57	n:2130000
Cons ci ratio: 1.840374e-06	ci left: 9.999983e-01	ci right 1	k: 2130000	n:2130000
KS ci ratio: 2.771857e+00	ci left: 1.188629e-08	ci right 2.615792e-06	k: 1	n:2130000
ZNF878   2130000 perm   2187 sec   (974 perm/sec)   p_kst 4.694836e-07   p_cons 1   p_joint 2.676056e-05

Joint ci ratio: 5.147141e-01	ci left: 2.017354e-05	ci right 3.450926e-05	k: 57	n:2140000
Cons ci ratio: 1.831774e-06	ci left: 9.999983e-01	ci right 1	k: 2140000	n:2140000
KS ci ratio: 2.771857e+00	ci left: 1.183075e-08	ci right 2.603569e-06	k: 1	n:2140000
ZNF878   2140000 perm   2206 sec   (970 perm/sec)   p_kst 4.672897e-07   p_cons 1   p_joint 2.663551e-05

Joint ci ratio: 5.147142e-01	ci left: 2.007971e-05	ci right 3.434875e-05	k: 57	n:2150000
Cons ci ratio: 1.823254e-06	ci left: 9.999983e-01	ci right 1	k: 2150000	n:2150000
KS ci ratio: 2.771857e+00	ci left: 1.177572e-08	ci right 2.591459e-06	k: 1	n:2150000
ZNF878   2150000 perm   2226 sec   (966 perm/sec)   p_kst 4.651163e-07   p_cons 1   p_joint 2.651163e-05

Joint ci ratio: 5.435995e-01	ci left: 1.758007e-05	ci right 3.104414e-05	k: 51	n:2160000
Cons ci ratio: 1.814813e-06	ci left: 9.999983e-01	ci right 1	k: 2160000	n:2160000
KS ci ratio: 2.771857e+00	ci left: 1.172121e-08	ci right 2.579462e-06	k: 1	n:2160000
ZNF878   2160000 perm   2246 sec   (962 perm/sec)   p_kst 4.629630e-07   p_cons 1   p_joint 2.361111e-05

Joint ci ratio: 5.435996e-01	ci left: 1.749906e-05	ci right 3.090108e-05	k: 51	n:2170000
Cons ci ratio: 1.806450e-06	ci left: 9.999983e-01	ci right 1	k: 2170000	n:2170000
KS ci ratio: 2.771857e+00	ci left: 1.166719e-08	ci right 2.567575e-06	k: 1	n:2170000
ZNF878   2170000 perm   2266 sec   (958 perm/sec)   p_kst 4.608295e-07   p_cons 1   p_joint 2.350230e-05

Joint ci ratio: 5.435996e-01	ci left: 1.741879e-05	ci right 3.075933e-05	k: 51	n:2180000
Cons ci ratio: 1.798163e-06	ci left: 9.999983e-01	ci right 1	k: 2180000	n:2180000
KS ci ratio: 2.771857e+00	ci left: 1.161367e-08	ci right 2.555797e-06	k: 1	n:2180000
ZNF878   2180000 perm   2286 sec   (954 perm/sec)   p_kst 4.587156e-07   p_cons 1   p_joint 2.339450e-05

Joint ci ratio: 5.435996e-01	ci left: 1.733925e-05	ci right 3.061887e-05	k: 51	n:2190000
Cons ci ratio: 1.789953e-06	ci left: 9.999983e-01	ci right 1	k: 2190000	n:2190000
KS ci ratio: 2.771857e+00	ci left: 1.156064e-08	ci right 2.544127e-06	k: 1	n:2190000
ZNF878   2190000 perm   2306 sec   (950 perm/sec)   p_kst 4.566210e-07   p_cons 1   p_joint 2.328767e-05

Joint ci ratio: 5.435996e-01	ci left: 1.726043e-05	ci right 3.047970e-05	k: 51	n:2200000
Cons ci ratio: 1.781817e-06	ci left: 9.999983e-01	ci right 1	k: 2200000	n:2200000
KS ci ratio: 2.771857e+00	ci left: 1.150809e-08	ci right 2.532563e-06	k: 1	n:2200000
ZNF878   2200000 perm   2326 sec   (946 perm/sec)   p_kst 4.545455e-07   p_cons 1   p_joint 2.318182e-05

Joint ci ratio: 5.334378e-01	ci left: 1.796414e-05	ci right 3.136880e-05	k: 53	n:2210000
Cons ci ratio: 1.773754e-06	ci left: 9.999983e-01	ci right 1	k: 2210000	n:2210000
KS ci ratio: 2.771857e+00	ci left: 1.145602e-08	ci right 2.521103e-06	k: 1	n:2210000
ZNF878   2210000 perm   2346 sec   (942 perm/sec)   p_kst 4.524887e-07   p_cons 1   p_joint 2.398190e-05

Joint ci ratio: 5.334378e-01	ci left: 1.788322e-05	ci right 3.122750e-05	k: 53	n:2220000
Cons ci ratio: 1.765764e-06	ci left: 9.999983e-01	ci right 1	k: 2220000	n:2220000
KS ci ratio: 2.771857e+00	ci left: 1.140442e-08	ci right 2.509747e-06	k: 1	n:2220000
ZNF878   2220000 perm   2367 sec   (938 perm/sec)   p_kst 4.504505e-07   p_cons 1   p_joint 2.387387e-05

Joint ci ratio: 5.334379e-01	ci left: 1.780303e-05	ci right 3.108747e-05	k: 53	n:2230000
Cons ci ratio: 1.757846e-06	ci left: 9.999983e-01	ci right 1	k: 2230000	n:2230000
KS ci ratio: 2.771857e+00	ci left: 1.135328e-08	ci right 2.498492e-06	k: 1	n:2230000
ZNF878   2230000 perm   2387 sec   (934 perm/sec)   p_kst 4.484305e-07   p_cons 1   p_joint 2.376682e-05

Joint ci ratio: 5.334379e-01	ci left: 1.772355e-05	ci right 3.094868e-05	k: 53	n:2240000
Cons ci ratio: 1.749998e-06	ci left: 9.999984e-01	ci right 1	k: 2240000	n:2240000
KS ci ratio: 2.771857e+00	ci left: 1.130259e-08	ci right 2.487338e-06	k: 1	n:2240000
ZNF878   2240000 perm   2408 sec   (930 perm/sec)   p_kst 4.464286e-07   p_cons 1   p_joint 2.366071e-05

Joint ci ratio: 5.334379e-01	ci left: 1.764478e-05	ci right 3.081113e-05	k: 53	n:2250000
Cons ci ratio: 1.742221e-06	ci left: 9.999984e-01	ci right 1	k: 2250000	n:2250000
KS ci ratio: 2.771857e+00	ci left: 1.125236e-08	ci right 2.476283e-06	k: 1	n:2250000
ZNF878   2250000 perm   2429 sec   (926 perm/sec)   p_kst 4.444444e-07   p_cons 1   p_joint 2.355556e-05

Joint ci ratio: 5.334379e-01	ci left: 1.756670e-05	ci right 3.067480e-05	k: 53	n:2260000
Cons ci ratio: 1.734512e-06	ci left: 9.999984e-01	ci right 1	k: 2260000	n:2260000
KS ci ratio: 2.771857e+00	ci left: 1.120257e-08	ci right 2.465326e-06	k: 1	n:2260000
ZNF878   2260000 perm   2450 sec   (922 perm/sec)   p_kst 4.424779e-07   p_cons 1   p_joint 2.345133e-05

Joint ci ratio: 5.334380e-01	ci left: 1.748931e-05	ci right 3.053967e-05	k: 53	n:2270000
Cons ci ratio: 1.726871e-06	ci left: 9.999984e-01	ci right 1	k: 2270000	n:2270000
KS ci ratio: 2.771857e+00	ci left: 1.115322e-08	ci right 2.454466e-06	k: 1	n:2270000
ZNF878   2270000 perm   2470 sec   (919 perm/sec)   p_kst 4.405286e-07   p_cons 1   p_joint 2.334802e-05

Joint ci ratio: 5.334380e-01	ci left: 1.741261e-05	ci right 3.040573e-05	k: 53	n:2280000
Cons ci ratio: 1.719297e-06	ci left: 9.999984e-01	ci right 1	k: 2280000	n:2280000
KS ci ratio: 2.771857e+00	ci left: 1.110430e-08	ci right 2.443701e-06	k: 1	n:2280000
ZNF878   2280000 perm   2489 sec   (916 perm/sec)   p_kst 4.385965e-07   p_cons 1   p_joint 2.324561e-05

Joint ci ratio: 5.599939e-01	ci left: 1.545480e-05	ci right 2.779075e-05	k: 48	n:2290000
Cons ci ratio: 2.420836e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2289999	n:2290000
KS ci ratio: 2.771857e+00	ci left: 1.105581e-08	ci right 2.433030e-06	k: 1	n:2290000
ZNF878   2290000 perm   2510 sec   (912 perm/sec)   p_kst 4.366812e-07   p_cons 9.999996e-01   p_joint 2.096070e-05

Joint ci ratio: 5.657972e-01	ci left: 1.501475e-05	ci right 2.717384e-05	k: 47	n:2300000
Cons ci ratio: 2.410310e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2299999	n:2300000
KS ci ratio: 2.771857e+00	ci left: 1.100774e-08	ci right 2.422451e-06	k: 1	n:2300000
ZNF878   2300000 perm   2530 sec   (909 perm/sec)   p_kst 4.347826e-07   p_cons 9.999996e-01   p_joint 2.043478e-05

Joint ci ratio: 5.657973e-01	ci left: 1.494975e-05	ci right 2.705620e-05	k: 47	n:2310000
Cons ci ratio: 2.399876e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2309999	n:2310000
KS ci ratio: 2.771857e+00	ci left: 1.096009e-08	ci right 2.411964e-06	k: 1	n:2310000
ZNF878   2310000 perm   2552 sec   (905 perm/sec)   p_kst 4.329004e-07   p_cons 9.999996e-01   p_joint 2.034632e-05

Joint ci ratio: 5.657973e-01	ci left: 1.488531e-05	ci right 2.693958e-05	k: 47	n:2320000
Cons ci ratio: 2.389532e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2319999	n:2320000
KS ci ratio: 2.771857e+00	ci left: 1.091285e-08	ci right 2.401568e-06	k: 1	n:2320000
ZNF878   2320000 perm   2574 sec   (901 perm/sec)   p_kst 4.310345e-07   p_cons 9.999996e-01   p_joint 2.025862e-05

Joint ci ratio: 5.599940e-01	ci left: 1.518948e-05	ci right 2.731366e-05	k: 48	n:2330000
Cons ci ratio: 2.379276e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2329999	n:2330000
KS ci ratio: 2.771857e+00	ci left: 1.086601e-08	ci right 2.391261e-06	k: 1	n:2330000
ZNF878   2330000 perm   2596 sec   (897 perm/sec)   p_kst 4.291845e-07   p_cons 9.999996e-01   p_joint 2.060086e-05

Joint ci ratio: 5.543657e-01	ci left: 1.549169e-05	ci right 2.768392e-05	k: 49	n:2340000
Cons ci ratio: 2.369108e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2339999	n:2340000
KS ci ratio: 2.771857e+00	ci left: 1.081958e-08	ci right 2.381042e-06	k: 1	n:2340000
ZNF878   2340000 perm   2620 sec   (893 perm/sec)   p_kst 4.273504e-07   p_cons 9.999996e-01   p_joint 2.094017e-05

Joint ci ratio: 5.543657e-01	ci left: 1.542577e-05	ci right 2.756612e-05	k: 49	n:2350000
Cons ci ratio: 2.359027e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2349999	n:2350000
KS ci ratio: 2.771857e+00	ci left: 1.077354e-08	ci right 2.370910e-06	k: 1	n:2350000
ZNF878   2350000 perm   2642 sec   (889 perm/sec)   p_kst 4.255319e-07   p_cons 9.999996e-01   p_joint 2.085106e-05

Joint ci ratio: 5.489037e-01	ci left: 1.572502e-05	ci right 2.793159e-05	k: 50	n:2360000
Cons ci ratio: 2.349031e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2359999	n:2360000
KS ci ratio: 2.771857e+00	ci left: 1.072788e-08	ci right 2.360864e-06	k: 1	n:2360000
ZNF878   2360000 perm   2666 sec   (885 perm/sec)   p_kst 4.237288e-07   p_cons 9.999996e-01   p_joint 2.118644e-05

Joint ci ratio: 5.384473e-01	ci left: 1.638658e-05	ci right 2.877251e-05	k: 52	n:2370000
Cons ci ratio: 2.339120e-06	ci left: 9.999976e-01	ci right 1.000000e+00	k: 2369999	n:2370000
KS ci ratio: 2.771857e+00	ci left: 1.068262e-08	ci right 2.350902e-06	k: 1	n:2370000
ZNF878   2370000 perm   2689 sec   (881 perm/sec)   p_kst 4.219409e-07   p_cons 9.999996e-01   p_joint 2.194093e-05

Joint ci ratio: 5.384473e-01	ci left: 1.631773e-05	ci right 2.865162e-05	k: 52	n:2380000
Cons ci ratio: 2.329291e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2379999	n:2380000
KS ci ratio: 2.771857e+00	ci left: 1.063773e-08	ci right 2.341024e-06	k: 1	n:2380000
ZNF878   2380000 perm   2713 sec   (877 perm/sec)   p_kst 4.201681e-07   p_cons 9.999996e-01   p_joint 2.184874e-05

Joint ci ratio: 5.384473e-01	ci left: 1.624945e-05	ci right 2.853174e-05	k: 52	n:2390000
Cons ci ratio: 2.319545e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2389999	n:2390000
KS ci ratio: 2.771857e+00	ci left: 1.059323e-08	ci right 2.331229e-06	k: 1	n:2390000
ZNF878   2390000 perm   2736 sec   (873 perm/sec)   p_kst 4.184100e-07   p_cons 9.999996e-01   p_joint 2.175732e-05

Joint ci ratio: 5.384474e-01	ci left: 1.618174e-05	ci right 2.841285e-05	k: 52	n:2400000
Cons ci ratio: 2.309881e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2399999	n:2400000
KS ci ratio: 2.771857e+00	ci left: 1.054909e-08	ci right 2.321516e-06	k: 1	n:2400000
ZNF878   2400000 perm   2758 sec   (870 perm/sec)   p_kst 4.166667e-07   p_cons 9.999996e-01   p_joint 2.166667e-05

Joint ci ratio: 5.334383e-01	ci left: 1.647334e-05	ci right 2.876559e-05	k: 53	n:2410000
Cons ci ratio: 2.300296e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2409999	n:2410000
KS ci ratio: 2.771857e+00	ci left: 1.050531e-08	ci right 2.311883e-06	k: 1	n:2410000
ZNF878   2410000 perm   2780 sec   (867 perm/sec)   p_kst 4.149378e-07   p_cons 9.999996e-01   p_joint 2.199170e-05

Joint ci ratio: 5.285666e-01	ci left: 1.676304e-05	ci right 2.911490e-05	k: 54	n:2420000
Cons ci ratio: 2.290791e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2419999	n:2420000
KS ci ratio: 2.771857e+00	ci left: 1.046190e-08	ci right 2.302330e-06	k: 1	n:2420000
ZNF878   2420000 perm   2801 sec   (864 perm/sec)   p_kst 4.132231e-07   p_cons 9.999996e-01   p_joint 2.231405e-05

Joint ci ratio: 5.285666e-01	ci left: 1.669406e-05	ci right 2.899508e-05	k: 54	n:2430000
Cons ci ratio: 2.281364e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2429999	n:2430000
KS ci ratio: 2.771857e+00	ci left: 1.041885e-08	ci right 2.292855e-06	k: 1	n:2430000
ZNF878   2430000 perm   2823 sec   (861 perm/sec)   p_kst 4.115226e-07   p_cons 9.999996e-01   p_joint 2.222222e-05

Joint ci ratio: 5.285666e-01	ci left: 1.662564e-05	ci right 2.887625e-05	k: 54	n:2440000
Cons ci ratio: 2.272014e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2439999	n:2440000
KS ci ratio: 2.771857e+00	ci left: 1.037615e-08	ci right 2.283458e-06	k: 1	n:2440000
ZNF878   2440000 perm   2845 sec   (857 perm/sec)   p_kst 4.098361e-07   p_cons 9.999996e-01   p_joint 2.213115e-05

Joint ci ratio: 5.334384e-01	ci left: 1.620438e-05	ci right 2.829595e-05	k: 53	n:2450000
Cons ci ratio: 2.262740e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2449999	n:2450000
KS ci ratio: 2.771857e+00	ci left: 1.033380e-08	ci right 2.274138e-06	k: 1	n:2450000
ZNF878   2450000 perm   2867 sec   (855 perm/sec)   p_kst 4.081633e-07   p_cons 9.999996e-01   p_joint 2.163265e-05

Joint ci ratio: 5.334385e-01	ci left: 1.613851e-05	ci right 2.818092e-05	k: 53	n:2460000
Cons ci ratio: 2.253542e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2459999	n:2460000
KS ci ratio: 2.771857e+00	ci left: 1.029179e-08	ci right 2.264894e-06	k: 1	n:2460000
ZNF878   2460000 perm   2889 sec   (852 perm/sec)   p_kst 4.065041e-07   p_cons 9.999996e-01   p_joint 2.154472e-05

Joint ci ratio: 5.334385e-01	ci left: 1.607317e-05	ci right 2.806683e-05	k: 53	n:2470000
Cons ci ratio: 2.244419e-06	ci left: 9.999977e-01	ci right 1.000000e+00	k: 2469999	n:2470000
KS ci ratio: 2.771857e+00	ci left: 1.025012e-08	ci right 2.255724e-06	k: 1	n:2470000
ZNF878   2470000 perm   2910 sec   (849 perm/sec)   p_kst 4.048583e-07   p_cons 9.999996e-01   p_joint 2.145749e-05

Joint ci ratio: 5.285667e-01	ci left: 1.635749e-05	ci right 2.841051e-05	k: 54	n:2480000
Cons ci ratio: 2.235368e-06	ci left: 9.999978e-01	ci right 1.000000e+00	k: 2479999	n:2480000
KS ci ratio: 2.771857e+00	ci left: 1.020879e-08	ci right 2.246628e-06	k: 1	n:2480000
ZNF878   2480000 perm   2932 sec   (846 perm/sec)   p_kst 4.032258e-07   p_cons 9.999996e-01   p_joint 2.177419e-05

Joint ci ratio: 5.285667e-01	ci left: 1.629179e-05	ci right 2.829641e-05	k: 54	n:2490000
Cons ci ratio: 2.726762e-06	ci left: 9.999971e-01	ci right 9.999999e-01	k: 2489998	n:2490000
KS ci ratio: 2.771857e+00	ci left: 1.016779e-08	ci right 2.237606e-06	k: 1	n:2490000
ZNF878   2490000 perm   2955 sec   (843 perm/sec)   p_kst 4.016064e-07   p_cons 9.999992e-01   p_joint 2.168675e-05

Joint ci ratio: 5.285668e-01	ci left: 1.622663e-05	ci right 2.818322e-05	k: 54	n:2500000
Cons ci ratio: 2.715855e-06	ci left: 9.999971e-01	ci right 9.999999e-01	k: 2499998	n:2500000
KS ci ratio: 2.771857e+00	ci left: 1.012712e-08	ci right 2.228655e-06	k: 1	n:2500000
ZNF878   2500000 perm   2977 sec   (840 perm/sec)   p_kst 4.000000e-07   p_cons 9.999992e-01   p_joint 2.160000e-05

Joint ci ratio: 5.238261e-01	ci left: 1.650742e-05	ci right 2.852184e-05	k: 55	n:2510000
Cons ci ratio: 2.705034e-06	ci left: 9.999971e-01	ci right 9.999999e-01	k: 2509998	n:2510000
KS ci ratio: 2.771857e+00	ci left: 1.008678e-08	ci right 2.219776e-06	k: 1	n:2510000
ZNF878   2510000 perm   3000 sec   (837 perm/sec)   p_kst 3.984064e-07   p_cons 9.999992e-01   p_joint 2.191235e-05

Joint ci ratio: 5.238261e-01	ci left: 1.644192e-05	ci right 2.840866e-05	k: 55	n:2520000
Cons ci ratio: 2.694300e-06	ci left: 9.999971e-01	ci right 9.999999e-01	k: 2519998	n:2520000
KS ci ratio: 2.771857e+00	ci left: 1.004675e-08	ci right 2.210968e-06	k: 1	n:2520000
ZNF878   2520000 perm   3022 sec   (834 perm/sec)   p_kst 3.968254e-07   p_cons 9.999992e-01   p_joint 2.182540e-05

Joint ci ratio: 5.238261e-01	ci left: 1.637693e-05	ci right 2.829637e-05	k: 55	n:2530000
Cons ci ratio: 2.683651e-06	ci left: 9.999971e-01	ci right 9.999999e-01	k: 2529998	n:2530000
KS ci ratio: 2.771857e+00	ci left: 1.000704e-08	ci right 2.202229e-06	k: 1	n:2530000
ZNF878   2530000 perm   3044 sec   (831 perm/sec)   p_kst 3.952569e-07   p_cons 9.999992e-01   p_joint 2.173913e-05

Joint ci ratio: 5.238262e-01	ci left: 1.631245e-05	ci right 2.818497e-05	k: 55	n:2540000
Cons ci ratio: 2.673085e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2539998	n:2540000
KS ci ratio: 2.771857e+00	ci left: 9.967641e-09	ci right 2.193558e-06	k: 1	n:2540000
ZNF878   2540000 perm   3066 sec   (828 perm/sec)   p_kst 3.937008e-07   p_cons 9.999992e-01   p_joint 2.165354e-05

Joint ci ratio: 5.238262e-01	ci left: 1.624848e-05	ci right 2.807444e-05	k: 55	n:2550000
Cons ci ratio: 2.662603e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2549998	n:2550000
KS ci ratio: 2.771857e+00	ci left: 9.928552e-09	ci right 2.184956e-06	k: 1	n:2550000
ZNF878   2550000 perm   3089 sec   (826 perm/sec)   p_kst 3.921569e-07   p_cons 9.999992e-01   p_joint 2.156863e-05

Joint ci ratio: 5.238262e-01	ci left: 1.618501e-05	ci right 2.796478e-05	k: 55	n:2560000
Cons ci ratio: 2.652202e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2559998	n:2560000
KS ci ratio: 2.771857e+00	ci left: 9.889769e-09	ci right 2.176421e-06	k: 1	n:2560000
ZNF878   2560000 perm   3111 sec   (823 perm/sec)   p_kst 3.906250e-07   p_cons 9.999992e-01   p_joint 2.148437e-05

Joint ci ratio: 5.192108e-01	ci left: 1.645988e-05	ci right 2.829588e-05	k: 56	n:2570000
Cons ci ratio: 2.641882e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2569998	n:2570000
KS ci ratio: 2.771857e+00	ci left: 9.851287e-09	ci right 2.167953e-06	k: 1	n:2570000
ZNF878   2570000 perm   3135 sec   (820 perm/sec)   p_kst 3.891051e-07   p_cons 9.999992e-01   p_joint 2.178988e-05

Joint ci ratio: 5.192108e-01	ci left: 1.639609e-05	ci right 2.818621e-05	k: 56	n:2580000
Cons ci ratio: 2.631642e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2579998	n:2580000
KS ci ratio: 2.771857e+00	ci left: 9.813104e-09	ci right 2.159550e-06	k: 1	n:2580000
ZNF878   2580000 perm   3160 sec   (817 perm/sec)   p_kst 3.875969e-07   p_cons 9.999992e-01   p_joint 2.170543e-05

Joint ci ratio: 5.192109e-01	ci left: 1.633278e-05	ci right 2.807738e-05	k: 56	n:2590000
Cons ci ratio: 2.621481e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2589998	n:2590000
KS ci ratio: 2.771857e+00	ci left: 9.775216e-09	ci right 2.151212e-06	k: 1	n:2590000
ZNF878   2590000 perm   3184 sec   (814 perm/sec)   p_kst 3.861004e-07   p_cons 9.999992e-01   p_joint 2.162162e-05

Joint ci ratio: 5.147154e-01	ci left: 1.660437e-05	ci right 2.840380e-05	k: 57	n:2600000
Cons ci ratio: 2.611399e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2599998	n:2600000
KS ci ratio: 2.771857e+00	ci left: 9.737618e-09	ci right 2.142938e-06	k: 1	n:2600000
ZNF878   2600000 perm   3207 sec   (811 perm/sec)   p_kst 3.846154e-07   p_cons 9.999992e-01   p_joint 2.192308e-05

Joint ci ratio: 5.147154e-01	ci left: 1.654075e-05	ci right 2.829497e-05	k: 57	n:2610000
Cons ci ratio: 2.601393e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2609998	n:2610000
KS ci ratio: 2.771857e+00	ci left: 9.700310e-09	ci right 2.134727e-06	k: 1	n:2610000
ZNF878   2610000 perm   3230 sec   (808 perm/sec)   p_kst 3.831418e-07   p_cons 9.999992e-01   p_joint 2.183908e-05

Joint ci ratio: 5.060639e-01	ci left: 1.714261e-05	ci right 2.904788e-05	k: 59	n:2620000
Cons ci ratio: 2.591464e-06	ci left: 9.999972e-01	ci right 9.999999e-01	k: 2619998	n:2620000
KS ci ratio: 2.771857e+00	ci left: 9.663285e-09	ci right 2.126580e-06	k: 1	n:2620000
ZNF878   2620000 perm   3255 sec   (805 perm/sec)   p_kst 3.816794e-07   p_cons 9.999992e-01   p_joint 2.251908e-05

Joint ci ratio: 5.060640e-01	ci left: 1.707743e-05	ci right 2.893743e-05	k: 59	n:2630000
Cons ci ratio: 2.581611e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2629998	n:2630000
KS ci ratio: 2.771857e+00	ci left: 9.626543e-09	ci right 2.118494e-06	k: 1	n:2630000
ZNF878   2630000 perm   3278 sec   (802 perm/sec)   p_kst 3.802281e-07   p_cons 9.999992e-01   p_joint 2.243346e-05

Joint ci ratio: 5.018987e-01	ci left: 1.734335e-05	ci right 2.925441e-05	k: 60	n:2640000
Cons ci ratio: 2.571832e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2639998	n:2640000
KS ci ratio: 2.771857e+00	ci left: 9.590079e-09	ci right 2.110469e-06	k: 1	n:2640000
ZNF878   2640000 perm   3302 sec   (800 perm/sec)   p_kst 3.787879e-07   p_cons 9.999992e-01   p_joint 2.272727e-05

Joint ci ratio: 5.018987e-01	ci left: 1.727790e-05	ci right 2.914402e-05	k: 60	n:2650000
Cons ci ratio: 2.562127e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2649998	n:2650000
KS ci ratio: 2.771857e+00	ci left: 9.553890e-09	ci right 2.102505e-06	k: 1	n:2650000
ZNF878   2650000 perm   3326 sec   (797 perm/sec)   p_kst 3.773585e-07   p_cons 9.999992e-01   p_joint 2.264151e-05

Joint ci ratio: 5.018987e-01	ci left: 1.721295e-05	ci right 2.903445e-05	k: 60	n:2660000
Cons ci ratio: 2.552495e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2659998	n:2660000
KS ci ratio: 2.771857e+00	ci left: 9.517973e-09	ci right 2.094601e-06	k: 1	n:2660000
ZNF878   2660000 perm   3350 sec   (794 perm/sec)   p_kst 3.759398e-07   p_cons 9.999992e-01   p_joint 2.255639e-05

Joint ci ratio: 5.018987e-01	ci left: 1.714848e-05	ci right 2.892571e-05	k: 60	n:2670000
Cons ci ratio: 2.542935e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2669998	n:2670000
KS ci ratio: 2.771857e+00	ci left: 9.482325e-09	ci right 2.086756e-06	k: 1	n:2670000
ZNF878   2670000 perm   3373 sec   (792 perm/sec)   p_kst 3.745318e-07   p_cons 9.999993e-01   p_joint 2.247191e-05

Joint ci ratio: 4.978346e-01	ci left: 1.741055e-05	ci right 2.923761e-05	k: 61	n:2680000
Cons ci ratio: 2.533447e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2679998	n:2680000
KS ci ratio: 2.771857e+00	ci left: 9.446943e-09	ci right 2.078970e-06	k: 1	n:2680000
ZNF878   2680000 perm   3397 sec   (789 perm/sec)   p_kst 3.731343e-07   p_cons 9.999993e-01   p_joint 2.276119e-05

Joint ci ratio: 4.938677e-01	ci left: 1.767106e-05	ci right 2.954682e-05	k: 62	n:2690000
Cons ci ratio: 2.524028e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2689998	n:2690000
KS ci ratio: 2.771857e+00	ci left: 9.411825e-09	ci right 2.071241e-06	k: 1	n:2690000
ZNF878   2690000 perm   3420 sec   (786 perm/sec)   p_kst 3.717472e-07   p_cons 9.999993e-01   p_joint 2.304833e-05

Joint ci ratio: 4.938677e-01	ci left: 1.760562e-05	ci right 2.943739e-05	k: 62	n:2700000
Cons ci ratio: 2.514680e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2699998	n:2700000
KS ci ratio: 2.771857e+00	ci left: 9.376966e-09	ci right 2.063570e-06	k: 1	n:2700000
ZNF878   2700000 perm   3444 sec   (784 perm/sec)   p_kst 3.703704e-07   p_cons 9.999993e-01   p_joint 2.296296e-05

Joint ci ratio: 4.938677e-01	ci left: 1.754065e-05	ci right 2.932876e-05	k: 62	n:2710000
Cons ci ratio: 2.505401e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2709998	n:2710000
KS ci ratio: 2.771857e+00	ci left: 9.342365e-09	ci right 2.055955e-06	k: 1	n:2710000
ZNF878   2710000 perm   3468 sec   (781 perm/sec)   p_kst 3.690037e-07   p_cons 9.999993e-01   p_joint 2.287823e-05

Joint ci ratio: 4.899941e-01	ci left: 1.779818e-05	ci right 2.963386e-05	k: 63	n:2720000
Cons ci ratio: 2.496190e-06	ci left: 9.999973e-01	ci right 9.999999e-01	k: 2719998	n:2720000
KS ci ratio: 2.771857e+00	ci left: 9.308018e-09	ci right 2.048397e-06	k: 1	n:2720000
ZNF878   2720000 perm   3492 sec   (779 perm/sec)   p_kst 3.676471e-07   p_cons 9.999993e-01   p_joint 2.316176e-05

Joint ci ratio: 4.899942e-01	ci left: 1.773299e-05	ci right 2.952531e-05	k: 63	n:2730000
Cons ci ratio: 2.487046e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2729998	n:2730000
KS ci ratio: 2.771857e+00	ci left: 9.273922e-09	ci right 2.040893e-06	k: 1	n:2730000
ZNF878   2730000 perm   3515 sec   (777 perm/sec)   p_kst 3.663004e-07   p_cons 9.999993e-01   p_joint 2.307692e-05

Joint ci ratio: 4.899942e-01	ci left: 1.766827e-05	ci right 2.941756e-05	k: 63	n:2740000
Cons ci ratio: 2.477970e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2739998	n:2740000
KS ci ratio: 2.771857e+00	ci left: 9.240076e-09	ci right 2.033445e-06	k: 1	n:2740000
ZNF878   2740000 perm   3539 sec   (774 perm/sec)   p_kst 3.649635e-07   p_cons 9.999993e-01   p_joint 2.299270e-05

Joint ci ratio: 5.060642e-01	ci left: 1.633223e-05	ci right 2.767471e-05	k: 59	n:2750000
Cons ci ratio: 2.468959e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2749998	n:2750000
KS ci ratio: 2.771857e+00	ci left: 9.206476e-09	ci right 2.026050e-06	k: 1	n:2750000
ZNF878   2750000 perm   3563 sec   (772 perm/sec)   p_kst 3.636364e-07   p_cons 9.999993e-01   p_joint 2.145455e-05

Joint ci ratio: 5.060642e-01	ci left: 1.627306e-05	ci right 2.757444e-05	k: 59	n:2760000
Cons ci ratio: 2.460013e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2759998	n:2760000
KS ci ratio: 2.771857e+00	ci left: 9.173119e-09	ci right 2.018710e-06	k: 1	n:2760000
ZNF878   2760000 perm   3586 sec   (770 perm/sec)   p_kst 3.623188e-07   p_cons 9.999993e-01   p_joint 2.137681e-05

Joint ci ratio: 5.060643e-01	ci left: 1.621431e-05	ci right 2.747490e-05	k: 59	n:2770000
Cons ci ratio: 2.451132e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2769998	n:2770000
KS ci ratio: 2.771857e+00	ci left: 9.140003e-09	ci right 2.011422e-06	k: 1	n:2770000
ZNF878   2770000 perm   3610 sec   (767 perm/sec)   p_kst 3.610108e-07   p_cons 9.999993e-01   p_joint 2.129964e-05

Joint ci ratio: 5.018990e-01	ci left: 1.646994e-05	ci right 2.778117e-05	k: 60	n:2780000
Cons ci ratio: 2.442315e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2779998	n:2780000
KS ci ratio: 2.771857e+00	ci left: 9.107125e-09	ci right 2.004187e-06	k: 1	n:2780000
ZNF878   2780000 perm   3633 sec   (765 perm/sec)   p_kst 3.597122e-07   p_cons 9.999993e-01   p_joint 2.158273e-05

Joint ci ratio: 5.018990e-01	ci left: 1.641091e-05	ci right 2.768160e-05	k: 60	n:2790000
Cons ci ratio: 2.433562e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2789998	n:2790000
KS ci ratio: 2.771857e+00	ci left: 9.074483e-09	ci right 1.997003e-06	k: 1	n:2790000
ZNF878   2790000 perm   3657 sec   (763 perm/sec)   p_kst 3.584229e-07   p_cons 9.999993e-01   p_joint 2.150538e-05

Joint ci ratio: 5.018990e-01	ci left: 1.635230e-05	ci right 2.758273e-05	k: 60	n:2800000
Cons ci ratio: 2.424870e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2799998	n:2800000
KS ci ratio: 2.771857e+00	ci left: 9.042074e-09	ci right 1.989871e-06	k: 1	n:2800000
ZNF878   2800000 perm   3681 sec   (761 perm/sec)   p_kst 3.571429e-07   p_cons 9.999993e-01   p_joint 2.142857e-05

Joint ci ratio: 5.018990e-01	ci left: 1.629410e-05	ci right 2.748458e-05	k: 60	n:2810000
Cons ci ratio: 2.416241e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2809998	n:2810000
KS ci ratio: 2.771857e+00	ci left: 9.009896e-09	ci right 1.982790e-06	k: 1	n:2810000
ZNF878   2810000 perm   3705 sec   (758 perm/sec)   p_kst 3.558719e-07   p_cons 9.999993e-01   p_joint 2.135231e-05

Joint ci ratio: 5.018991e-01	ci left: 1.623632e-05	ci right 2.738711e-05	k: 60	n:2820000
Cons ci ratio: 2.407673e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2819998	n:2820000
KS ci ratio: 2.771857e+00	ci left: 8.977946e-09	ci right 1.975758e-06	k: 1	n:2820000
ZNF878   2820000 perm   3730 sec   (756 perm/sec)   p_kst 3.546099e-07   p_cons 9.999993e-01   p_joint 2.127660e-05

Joint ci ratio: 5.018991e-01	ci left: 1.617895e-05	ci right 2.729034e-05	k: 60	n:2830000
Cons ci ratio: 2.399165e-06	ci left: 9.999974e-01	ci right 9.999999e-01	k: 2829998	n:2830000
KS ci ratio: 2.771857e+00	ci left: 8.946222e-09	ci right 1.968777e-06	k: 1	n:2830000
ZNF878   2830000 perm   3754 sec   (754 perm/sec)   p_kst 3.533569e-07   p_cons 9.999993e-01   p_joint 2.120141e-05

Joint ci ratio: 4.978350e-01	ci left: 1.642967e-05	ci right 2.759043e-05	k: 61	n:2840000
Cons ci ratio: 2.390717e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2839998	n:2840000
KS ci ratio: 2.771857e+00	ci left: 8.914721e-09	ci right 1.961845e-06	k: 1	n:2840000
ZNF878   2840000 perm   3779 sec   (752 perm/sec)   p_kst 3.521127e-07   p_cons 9.999993e-01   p_joint 2.147887e-05

Joint ci ratio: 4.978350e-01	ci left: 1.637203e-05	ci right 2.749362e-05	k: 61	n:2850000
Cons ci ratio: 2.382329e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2849998	n:2850000
KS ci ratio: 2.771857e+00	ci left: 8.883441e-09	ci right 1.954961e-06	k: 1	n:2850000
ZNF878   2850000 perm   3803 sec   (749 perm/sec)   p_kst 3.508772e-07   p_cons 9.999993e-01   p_joint 2.140351e-05

Joint ci ratio: 4.978350e-01	ci left: 1.631478e-05	ci right 2.739749e-05	k: 61	n:2860000
Cons ci ratio: 2.373999e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2859998	n:2860000
KS ci ratio: 2.771857e+00	ci left: 8.852380e-09	ci right 1.948126e-06	k: 1	n:2860000
ZNF878   2860000 perm   3828 sec   (747 perm/sec)   p_kst 3.496503e-07   p_cons 9.999993e-01   p_joint 2.132867e-05

Joint ci ratio: 4.978350e-01	ci left: 1.625794e-05	ci right 2.730203e-05	k: 61	n:2870000
Cons ci ratio: 2.365727e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2869998	n:2870000
KS ci ratio: 2.771857e+00	ci left: 8.821536e-09	ci right 1.941338e-06	k: 1	n:2870000
ZNF878   2870000 perm   3854 sec   (745 perm/sec)   p_kst 3.484321e-07   p_cons 9.999993e-01   p_joint 2.125436e-05

Joint ci ratio: 4.978351e-01	ci left: 1.620148e-05	ci right 2.720723e-05	k: 61	n:2880000
Cons ci ratio: 2.357513e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2879998	n:2880000
KS ci ratio: 2.771857e+00	ci left: 8.790905e-09	ci right 1.934597e-06	k: 1	n:2880000
ZNF878   2880000 perm   3879 sec   (743 perm/sec)   p_kst 3.472222e-07   p_cons 9.999993e-01   p_joint 2.118056e-05

Joint ci ratio: 4.978351e-01	ci left: 1.614542e-05	ci right 2.711309e-05	k: 61	n:2890000
Cons ci ratio: 2.349355e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2889998	n:2890000
KS ci ratio: 2.771857e+00	ci left: 8.760487e-09	ci right 1.927903e-06	k: 1	n:2890000
ZNF878   2890000 perm   3904 sec   (740 perm/sec)   p_kst 3.460208e-07   p_cons 9.999993e-01   p_joint 2.110727e-05

Joint ci ratio: 4.978351e-01	ci left: 1.608975e-05	ci right 2.701959e-05	k: 61	n:2900000
Cons ci ratio: 2.341254e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2899998	n:2900000
KS ci ratio: 2.771857e+00	ci left: 8.730279e-09	ci right 1.921255e-06	k: 1	n:2900000
ZNF878   2900000 perm   3929 sec   (738 perm/sec)   p_kst 3.448276e-07   p_cons 9.999993e-01   p_joint 2.103448e-05

Joint ci ratio: 4.938681e-01	ci left: 1.633510e-05	ci right 2.731305e-05	k: 62	n:2910000
Cons ci ratio: 2.333209e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2909998	n:2910000
KS ci ratio: 2.771857e+00	ci left: 8.700278e-09	ci right 1.914653e-06	k: 1	n:2910000
ZNF878   2910000 perm   3955 sec   (736 perm/sec)   p_kst 3.436426e-07   p_cons 9.999993e-01   p_joint 2.130584e-05

Joint ci ratio: 4.938682e-01	ci left: 1.627916e-05	ci right 2.721951e-05	k: 62	n:2920000
Cons ci ratio: 2.325218e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2919998	n:2920000
KS ci ratio: 2.771857e+00	ci left: 8.670482e-09	ci right 1.908096e-06	k: 1	n:2920000
ZNF878   2920000 perm   3980 sec   (734 perm/sec)   p_kst 3.424658e-07   p_cons 9.999993e-01   p_joint 2.123288e-05

Joint ci ratio: 4.938682e-01	ci left: 1.622360e-05	ci right 2.712661e-05	k: 62	n:2930000
Cons ci ratio: 2.317282e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2929998	n:2930000
KS ci ratio: 2.771857e+00	ci left: 8.640890e-09	ci right 1.901583e-06	k: 1	n:2930000
ZNF878   2930000 perm   4006 sec   (731 perm/sec)   p_kst 3.412969e-07   p_cons 9.999993e-01   p_joint 2.116041e-05

Joint ci ratio: 4.899946e-01	ci left: 1.646634e-05	ci right 2.741637e-05	k: 63	n:2940000
Cons ci ratio: 2.309400e-06	ci left: 9.999975e-01	ci right 9.999999e-01	k: 2939998	n:2940000
KS ci ratio: 2.771857e+00	ci left: 8.611499e-09	ci right 1.895115e-06	k: 1	n:2940000
ZNF878   2940000 perm   4032 sec   (729 perm/sec)   p_kst 3.401361e-07   p_cons 9.999993e-01   p_joint 2.142857e-05

Joint ci ratio: 4.899946e-01	ci left: 1.641052e-05	ci right 2.732343e-05	k: 63	n:2950000
Cons ci ratio: 2.301572e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 2949998	n:2950000
KS ci ratio: 2.771857e+00	ci left: 8.582308e-09	ci right 1.888691e-06	k: 1	n:2950000
ZNF878   2950000 perm   4058 sec   (727 perm/sec)   p_kst 3.389831e-07   p_cons 9.999993e-01   p_joint 2.135593e-05

Joint ci ratio: 4.825132e-01	ci left: 1.694789e-05	ci right 2.798905e-05	k: 65	n:2960000
Cons ci ratio: 2.293796e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 2959998	n:2960000
KS ci ratio: 2.771857e+00	ci left: 8.553313e-09	ci right 1.882311e-06	k: 1	n:2960000
ZNF878   2960000 perm   4085 sec   (725 perm/sec)   p_kst 3.378378e-07   p_cons 9.999993e-01   p_joint 2.195946e-05

Joint ci ratio: 4.825132e-01	ci left: 1.689082e-05	ci right 2.789481e-05	k: 65	n:2970000
Cons ci ratio: 2.286073e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 2969998	n:2970000
KS ci ratio: 2.771857e+00	ci left: 8.524514e-09	ci right 1.875973e-06	k: 1	n:2970000
ZNF878   2970000 perm   4111 sec   (722 perm/sec)   p_kst 3.367003e-07   p_cons 9.999993e-01   p_joint 2.188552e-05

Joint ci ratio: 4.825132e-01	ci left: 1.683414e-05	ci right 2.780120e-05	k: 65	n:2980000
Cons ci ratio: 2.278402e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 2979998	n:2980000
KS ci ratio: 2.771857e+00	ci left: 8.495909e-09	ci right 1.869678e-06	k: 1	n:2980000
ZNF878   2980000 perm   4137 sec   (720 perm/sec)   p_kst 3.355705e-07   p_cons 9.999993e-01   p_joint 2.181208e-05

Joint ci ratio: 4.938683e-01	ci left: 1.589804e-05	ci right 2.658226e-05	k: 62	n:2990000
Cons ci ratio: 2.270782e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 2989998	n:2990000
KS ci ratio: 2.771857e+00	ci left: 8.467494e-09	ci right 1.863424e-06	k: 1	n:2990000
ZNF878   2990000 perm   4162 sec   (718 perm/sec)   p_kst 3.344482e-07   p_cons 9.999993e-01   p_joint 2.073579e-05

Joint ci ratio: 4.938683e-01	ci left: 1.584505e-05	ci right 2.649366e-05	k: 62	n:3000000
Cons ci ratio: 2.263212e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 2999998	n:3000000
KS ci ratio: 2.771857e+00	ci left: 8.439269e-09	ci right 1.857213e-06	k: 1	n:3000000
ZNF878   3000000 perm   4189 sec   (716 perm/sec)   p_kst 3.333333e-07   p_cons 9.999993e-01   p_joint 2.066667e-05

Joint ci ratio: 4.938683e-01	ci left: 1.579241e-05	ci right 2.640564e-05	k: 62	n:3010000
Cons ci ratio: 2.255693e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 3009998	n:3010000
KS ci ratio: 2.771857e+00	ci left: 8.411232e-09	ci right 1.851043e-06	k: 1	n:3010000
ZNF878   3010000 perm   4215 sec   (714 perm/sec)   p_kst 3.322259e-07   p_cons 9.999993e-01   p_joint 2.059801e-05

Joint ci ratio: 4.938683e-01	ci left: 1.574012e-05	ci right 2.631820e-05	k: 62	n:3020000
Cons ci ratio: 2.248224e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 3019998	n:3020000
KS ci ratio: 2.771857e+00	ci left: 8.383380e-09	ci right 1.844914e-06	k: 1	n:3020000
ZNF878   3020000 perm   4241 sec   (712 perm/sec)   p_kst 3.311258e-07   p_cons 9.999993e-01   p_joint 2.052980e-05

Joint ci ratio: 4.938684e-01	ci left: 1.568817e-05	ci right 2.623134e-05	k: 62	n:3030000
Cons ci ratio: 2.240804e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 3029998	n:3030000
KS ci ratio: 2.771857e+00	ci left: 8.355712e-09	ci right 1.838825e-06	k: 1	n:3030000
ZNF878   3030000 perm   4265 sec   (710 perm/sec)   p_kst 3.300330e-07   p_cons 9.999993e-01   p_joint 2.046205e-05

Joint ci ratio: 4.938684e-01	ci left: 1.563656e-05	ci right 2.614506e-05	k: 62	n:3040000
Cons ci ratio: 2.233433e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 3039998	n:3040000
KS ci ratio: 2.771857e+00	ci left: 8.328226e-09	ci right 1.832776e-06	k: 1	n:3040000
ZNF878   3040000 perm   4290 sec   (709 perm/sec)   p_kst 3.289474e-07   p_cons 9.999993e-01   p_joint 2.039474e-05

Joint ci ratio: 4.938684e-01	ci left: 1.558529e-05	ci right 2.605934e-05	k: 62	n:3050000
Cons ci ratio: 2.226110e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 3049998	n:3050000
KS ci ratio: 2.771857e+00	ci left: 8.300921e-09	ci right 1.826767e-06	k: 1	n:3050000
ZNF878   3050000 perm   4315 sec   (707 perm/sec)   p_kst 3.278689e-07   p_cons 9.999993e-01   p_joint 2.032787e-05

Joint ci ratio: 4.938684e-01	ci left: 1.553436e-05	ci right 2.597417e-05	k: 62	n:3060000
Cons ci ratio: 2.218836e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 3059998	n:3060000
KS ci ratio: 2.771857e+00	ci left: 8.273793e-09	ci right 1.820797e-06	k: 1	n:3060000
ZNF878   3060000 perm   4339 sec   (705 perm/sec)   p_kst 3.267974e-07   p_cons 9.999993e-01   p_joint 2.026144e-05

Joint ci ratio: 4.938684e-01	ci left: 1.548376e-05	ci right 2.588957e-05	k: 62	n:3070000
Cons ci ratio: 2.211608e-06	ci left: 9.999976e-01	ci right 9.999999e-01	k: 3069998	n:3070000
KS ci ratio: 2.771857e+00	ci left: 8.246843e-09	ci right 1.814866e-06	k: 1	n:3070000
ZNF878   3070000 perm   4364 sec   (703 perm/sec)   p_kst 3.257329e-07   p_cons 9.999993e-01   p_joint 2.019544e-05

Joint ci ratio: 4.899948e-01	ci left: 1.571787e-05	ci right 2.617017e-05	k: 63	n:3080000
Cons ci ratio: 2.204428e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3079998	n:3080000
KS ci ratio: 2.771857e+00	ci left: 8.220068e-09	ci right 1.808974e-06	k: 1	n:3080000
ZNF878   3080000 perm   4389 sec   (702 perm/sec)   p_kst 3.246753e-07   p_cons 9.999994e-01   p_joint 2.045455e-05

Joint ci ratio: 4.899948e-01	ci left: 1.566700e-05	ci right 2.608548e-05	k: 63	n:3090000
Cons ci ratio: 2.197294e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3089998	n:3090000
KS ci ratio: 2.771857e+00	ci left: 8.193465e-09	ci right 1.803120e-06	k: 1	n:3090000
ZNF878   3090000 perm   4414 sec   (700 perm/sec)   p_kst 3.236246e-07   p_cons 9.999994e-01   p_joint 2.038835e-05

Joint ci ratio: 4.899949e-01	ci left: 1.561646e-05	ci right 2.600133e-05	k: 63	n:3100000
Cons ci ratio: 2.190205e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3099998	n:3100000
KS ci ratio: 2.771857e+00	ci left: 8.167035e-09	ci right 1.797303e-06	k: 1	n:3100000
ZNF878   3100000 perm   4438 sec   (698 perm/sec)   p_kst 3.225806e-07   p_cons 9.999994e-01   p_joint 2.032258e-05

Joint ci ratio: 4.862110e-01	ci left: 1.584820e-05	ci right 2.627857e-05	k: 64	n:3110000
Cons ci ratio: 2.183163e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3109998	n:3110000
KS ci ratio: 2.771857e+00	ci left: 8.140774e-09	ci right 1.791524e-06	k: 1	n:3110000
ZNF878   3110000 perm   4463 sec   (697 perm/sec)   p_kst 3.215434e-07   p_cons 9.999994e-01   p_joint 2.057878e-05

Joint ci ratio: 4.862110e-01	ci left: 1.579741e-05	ci right 2.619434e-05	k: 64	n:3120000
Cons ci ratio: 2.176166e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3119998	n:3120000
KS ci ratio: 2.771857e+00	ci left: 8.114682e-09	ci right 1.785782e-06	k: 1	n:3120000
ZNF878   3120000 perm   4488 sec   (695 perm/sec)   p_kst 3.205128e-07   p_cons 9.999994e-01   p_joint 2.051282e-05

Joint ci ratio: 4.862110e-01	ci left: 1.574693e-05	ci right 2.611065e-05	k: 64	n:3130000
Cons ci ratio: 2.169213e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3129998	n:3130000
KS ci ratio: 2.771857e+00	ci left: 8.088757e-09	ci right 1.780076e-06	k: 1	n:3130000
ZNF878   3130000 perm   4512 sec   (694 perm/sec)   p_kst 3.194888e-07   p_cons 9.999994e-01   p_joint 2.044728e-05

Joint ci ratio: 4.862110e-01	ci left: 1.569679e-05	ci right 2.602750e-05	k: 64	n:3140000
Cons ci ratio: 2.162305e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3139998	n:3140000
KS ci ratio: 2.771857e+00	ci left: 8.062996e-09	ci right 1.774407e-06	k: 1	n:3140000
ZNF878   3140000 perm   4537 sec   (692 perm/sec)   p_kst 3.184713e-07   p_cons 9.999994e-01   p_joint 2.038217e-05

Joint ci ratio: 4.825135e-01	ci left: 1.592563e-05	ci right 2.630083e-05	k: 65	n:3150000
Cons ci ratio: 2.155440e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3149998	n:3150000
KS ci ratio: 2.771857e+00	ci left: 8.037399e-09	ci right 1.768774e-06	k: 1	n:3150000
ZNF878   3150000 perm   4562 sec   (690 perm/sec)   p_kst 3.174603e-07   p_cons 9.999994e-01   p_joint 2.063492e-05

Joint ci ratio: 4.788991e-01	ci left: 1.615333e-05	ci right 2.657213e-05	k: 66	n:3160000
Cons ci ratio: 2.148619e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3159998	n:3160000
KS ci ratio: 2.771857e+00	ci left: 8.011965e-09	ci right 1.763177e-06	k: 1	n:3160000
ZNF878   3160000 perm   4587 sec   (689 perm/sec)   p_kst 3.164557e-07   p_cons 9.999994e-01   p_joint 2.088608e-05

Joint ci ratio: 4.753647e-01	ci left: 1.637987e-05	ci right 2.684145e-05	k: 67	n:3170000
Cons ci ratio: 2.141841e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3169998	n:3170000
KS ci ratio: 2.771857e+00	ci left: 7.986690e-09	ci right 1.757615e-06	k: 1	n:3170000
ZNF878   3170000 perm   4612 sec   (687 perm/sec)   p_kst 3.154574e-07   p_cons 9.999994e-01   p_joint 2.113565e-05

Joint ci ratio: 4.788991e-01	ci left: 1.605173e-05	ci right 2.640501e-05	k: 66	n:3180000
Cons ci ratio: 2.135106e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3179998	n:3180000
KS ci ratio: 2.771857e+00	ci left: 7.961575e-09	ci right 1.752088e-06	k: 1	n:3180000
ZNF878   3180000 perm   4636 sec   (686 perm/sec)   p_kst 3.144654e-07   p_cons 9.999994e-01   p_joint 2.075472e-05

Joint ci ratio: 4.788991e-01	ci left: 1.600141e-05	ci right 2.632224e-05	k: 66	n:3190000
Cons ci ratio: 2.128413e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3189998	n:3190000
KS ci ratio: 2.771857e+00	ci left: 7.936617e-09	ci right 1.746595e-06	k: 1	n:3190000
ZNF878   3190000 perm   4663 sec   (684 perm/sec)   p_kst 3.134796e-07   p_cons 9.999994e-01   p_joint 2.068966e-05

Joint ci ratio: 4.753647e-01	ci left: 1.622631e-05	ci right 2.658981e-05	k: 67	n:3200000
Cons ci ratio: 2.121762e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3199998	n:3200000
KS ci ratio: 2.771857e+00	ci left: 7.911815e-09	ci right 1.741137e-06	k: 1	n:3200000
ZNF878   3200000 perm   4689 sec   (682 perm/sec)   p_kst 3.125000e-07   p_cons 9.999994e-01   p_joint 2.093750e-05

Joint ci ratio: 4.753647e-01	ci left: 1.617576e-05	ci right 2.650698e-05	k: 67	n:3210000
Cons ci ratio: 2.115152e-06	ci left: 9.999977e-01	ci right 9.999999e-01	k: 3209998	n:3210000
KS ci ratio: 2.771857e+00	ci left: 7.887168e-09	ci right 1.735713e-06	k: 1	n:3210000
ZNF878   3210000 perm   4715 sec   (681 perm/sec)   p_kst 3.115265e-07   p_cons 9.999994e-01   p_joint 2.087227e-05

Joint ci ratio: 4.719074e-01	ci left: 1.639900e-05	ci right 2.677204e-05	k: 68	n:3220000
Cons ci ratio: 2.108583e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3219998	n:3220000
KS ci ratio: 2.771857e+00	ci left: 7.862673e-09	ci right 1.730323e-06	k: 1	n:3220000
ZNF878   3220000 perm   4741 sec   (679 perm/sec)   p_kst 3.105590e-07   p_cons 9.999994e-01   p_joint 2.111801e-05

Joint ci ratio: 4.719074e-01	ci left: 1.634823e-05	ci right 2.668915e-05	k: 68	n:3230000
Cons ci ratio: 2.102055e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3229998	n:3230000
KS ci ratio: 2.771857e+00	ci left: 7.838331e-09	ci right 1.724966e-06	k: 1	n:3230000
ZNF878   3230000 perm   4767 sec   (678 perm/sec)   p_kst 3.095975e-07   p_cons 9.999994e-01   p_joint 2.105263e-05

Joint ci ratio: 4.685245e-01	ci left: 1.656983e-05	ci right 2.695175e-05	k: 69	n:3240000
Cons ci ratio: 2.095567e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3239998	n:3240000
KS ci ratio: 2.771857e+00	ci left: 7.814138e-09	ci right 1.719642e-06	k: 1	n:3240000
ZNF878   3240000 perm   4792 sec   (676 perm/sec)   p_kst 3.086420e-07   p_cons 9.999994e-01   p_joint 2.129630e-05

Joint ci ratio: 4.685245e-01	ci left: 1.651884e-05	ci right 2.686882e-05	k: 69	n:3250000
Cons ci ratio: 2.089119e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3249998	n:3250000
KS ci ratio: 2.771857e+00	ci left: 7.790095e-09	ci right 1.714351e-06	k: 1	n:3250000
ZNF878   3250000 perm   4818 sec   (674 perm/sec)   p_kst 3.076923e-07   p_cons 9.999994e-01   p_joint 2.123077e-05

Joint ci ratio: 4.652133e-01	ci left: 1.673882e-05	ci right 2.712900e-05	k: 70	n:3260000
Cons ci ratio: 2.082711e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3259998	n:3260000
KS ci ratio: 2.771857e+00	ci left: 7.766199e-09	ci right 1.709092e-06	k: 1	n:3260000
ZNF878   3260000 perm   4844 sec   (673 perm/sec)   p_kst 3.067485e-07   p_cons 9.999994e-01   p_joint 2.147239e-05

Joint ci ratio: 4.652133e-01	ci left: 1.668763e-05	ci right 2.704604e-05	k: 70	n:3270000
Cons ci ratio: 2.076342e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3269998	n:3270000
KS ci ratio: 2.771857e+00	ci left: 7.742449e-09	ci right 1.703865e-06	k: 1	n:3270000
ZNF878   3270000 perm   4870 sec   (671 perm/sec)   p_kst 3.058104e-07   p_cons 9.999994e-01   p_joint 2.140673e-05

Joint ci ratio: 4.652133e-01	ci left: 1.663675e-05	ci right 2.696358e-05	k: 70	n:3280000
Cons ci ratio: 2.070011e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3279998	n:3280000
KS ci ratio: 2.771857e+00	ci left: 7.718844e-09	ci right 1.698671e-06	k: 1	n:3280000
ZNF878   3280000 perm   4896 sec   (670 perm/sec)   p_kst 3.048780e-07   p_cons 9.999994e-01   p_joint 2.134146e-05

Joint ci ratio: 4.652133e-01	ci left: 1.658619e-05	ci right 2.688162e-05	k: 70	n:3290000
Cons ci ratio: 2.063719e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3289998	n:3290000
KS ci ratio: 2.771857e+00	ci left: 7.695382e-09	ci right 1.693507e-06	k: 1	n:3290000
ZNF878   3290000 perm   4921 sec   (669 perm/sec)   p_kst 3.039514e-07   p_cons 9.999994e-01   p_joint 2.127660e-05

Joint ci ratio: 4.652133e-01	ci left: 1.653593e-05	ci right 2.680016e-05	k: 70	n:3300000
Cons ci ratio: 2.057466e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3299998	n:3300000
KS ci ratio: 2.771857e+00	ci left: 7.672063e-09	ci right 1.688376e-06	k: 1	n:3300000
ZNF878   3300000 perm   4947 sec   (667 perm/sec)   p_kst 3.030303e-07   p_cons 9.999994e-01   p_joint 2.121212e-05

Joint ci ratio: 4.652134e-01	ci left: 1.648597e-05	ci right 2.671920e-05	k: 70	n:3310000
Cons ci ratio: 2.051250e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3309998	n:3310000
KS ci ratio: 2.771857e+00	ci left: 7.648885e-09	ci right 1.683275e-06	k: 1	n:3310000
ZNF878   3310000 perm   4974 sec   (665 perm/sec)   p_kst 3.021148e-07   p_cons 9.999994e-01   p_joint 2.114804e-05

Joint ci ratio: 4.652134e-01	ci left: 1.643631e-05	ci right 2.663872e-05	k: 70	n:3320000
Cons ci ratio: 2.045071e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3319998	n:3320000
KS ci ratio: 2.771857e+00	ci left: 7.625846e-09	ci right 1.678205e-06	k: 1	n:3320000
ZNF878   3320000 perm   5000 sec   (664 perm/sec)   p_kst 3.012048e-07   p_cons 9.999994e-01   p_joint 2.108434e-05

Joint ci ratio: 4.652134e-01	ci left: 1.638695e-05	ci right 2.655872e-05	k: 70	n:3330000
Cons ci ratio: 2.038930e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3329998	n:3330000
KS ci ratio: 2.771857e+00	ci left: 7.602945e-09	ci right 1.673165e-06	k: 1	n:3330000
ZNF878   3330000 perm   5026 sec   (663 perm/sec)   p_kst 3.003003e-07   p_cons 9.999994e-01   p_joint 2.102102e-05

Joint ci ratio: 4.652134e-01	ci left: 1.633789e-05	ci right 2.647920e-05	k: 70	n:3340000
Cons ci ratio: 2.032825e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3339998	n:3340000
KS ci ratio: 2.771857e+00	ci left: 7.580182e-09	ci right 1.668156e-06	k: 1	n:3340000
ZNF878   3340000 perm   5053 sec   (661 perm/sec)   p_kst 2.994012e-07   p_cons 9.999994e-01   p_joint 2.095808e-05

Joint ci ratio: 4.652134e-01	ci left: 1.628912e-05	ci right 2.640016e-05	k: 70	n:3350000
Cons ci ratio: 2.026757e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3349998	n:3350000
KS ci ratio: 2.771857e+00	ci left: 7.557555e-09	ci right 1.663176e-06	k: 1	n:3350000
ZNF878   3350000 perm   5080 sec   (660 perm/sec)   p_kst 2.985075e-07   p_cons 9.999994e-01   p_joint 2.089552e-05

Joint ci ratio: 4.652134e-01	ci left: 1.624064e-05	ci right 2.632159e-05	k: 70	n:3360000
Cons ci ratio: 2.020725e-06	ci left: 9.999978e-01	ci right 9.999999e-01	k: 3359998	n:3360000
KS ci ratio: 2.771857e+00	ci left: 7.535062e-09	ci right 1.658226e-06	k: 1	n:3360000
ZNF878   3360000 perm   5107 sec   (658 perm/sec)   p_kst 2.976190e-07   p_cons 9.999994e-01   p_joint 2.083333e-05

Joint ci ratio: 4.652134e-01	ci left: 1.619245e-05	ci right 2.624349e-05	k: 70	n:3370000
Cons ci ratio: 2.014729e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3369998	n:3370000
KS ci ratio: 2.771857e+00	ci left: 7.512703e-09	ci right 1.653306e-06	k: 1	n:3370000
ZNF878   3370000 perm   5133 sec   (657 perm/sec)   p_kst 2.967359e-07   p_cons 9.999994e-01   p_joint 2.077151e-05

Joint ci ratio: 4.652135e-01	ci left: 1.614454e-05	ci right 2.616584e-05	k: 70	n:3380000
Cons ci ratio: 2.008768e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3379998	n:3380000
KS ci ratio: 2.771857e+00	ci left: 7.490476e-09	ci right 1.648414e-06	k: 1	n:3380000
ZNF878   3380000 perm   5159 sec   (655 perm/sec)   p_kst 2.958580e-07   p_cons 9.999994e-01   p_joint 2.071006e-05

Joint ci ratio: 4.652135e-01	ci left: 1.609692e-05	ci right 2.608866e-05	k: 70	n:3390000
Cons ci ratio: 2.002843e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3389998	n:3390000
KS ci ratio: 2.771857e+00	ci left: 7.468380e-09	ci right 1.643552e-06	k: 1	n:3390000
ZNF878   3390000 perm   5187 sec   (654 perm/sec)   p_kst 2.949853e-07   p_cons 9.999994e-01   p_joint 2.064897e-05

Joint ci ratio: 4.652135e-01	ci left: 1.604957e-05	ci right 2.601193e-05	k: 70	n:3400000
Cons ci ratio: 1.996952e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3399998	n:3400000
KS ci ratio: 2.771857e+00	ci left: 7.446414e-09	ci right 1.638718e-06	k: 1	n:3400000
ZNF878   3400000 perm   5214 sec   (652 perm/sec)   p_kst 2.941176e-07   p_cons 9.999994e-01   p_joint 2.058824e-05

Joint ci ratio: 4.652135e-01	ci left: 1.600251e-05	ci right 2.593565e-05	k: 70	n:3410000
Cons ci ratio: 1.991096e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3409998	n:3410000
KS ci ratio: 2.771857e+00	ci left: 7.424577e-09	ci right 1.633912e-06	k: 1	n:3410000
ZNF878   3410000 perm   5241 sec   (651 perm/sec)   p_kst 2.932551e-07   p_cons 9.999994e-01   p_joint 2.052786e-05

Joint ci ratio: 4.652135e-01	ci left: 1.595572e-05	ci right 2.585981e-05	k: 70	n:3420000
Cons ci ratio: 1.985274e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3419998	n:3420000
KS ci ratio: 2.771857e+00	ci left: 7.402868e-09	ci right 1.629134e-06	k: 1	n:3420000
ZNF878   3420000 perm   5268 sec   (649 perm/sec)   p_kst 2.923977e-07   p_cons 9.999994e-01   p_joint 2.046784e-05

Joint ci ratio: 4.652135e-01	ci left: 1.590920e-05	ci right 2.578442e-05	k: 70	n:3430000
Cons ci ratio: 1.979486e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3429998	n:3430000
KS ci ratio: 2.771857e+00	ci left: 7.381285e-09	ci right 1.624385e-06	k: 1	n:3430000
ZNF878   3430000 perm   5295 sec   (648 perm/sec)   p_kst 2.915452e-07   p_cons 9.999994e-01   p_joint 2.040816e-05

Joint ci ratio: 4.652135e-01	ci left: 1.586295e-05	ci right 2.570946e-05	k: 70	n:3440000
Cons ci ratio: 1.973732e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3439998	n:3440000
KS ci ratio: 2.771857e+00	ci left: 7.359828e-09	ci right 1.619663e-06	k: 1	n:3440000
ZNF878   3440000 perm   5322 sec   (646 perm/sec)   p_kst 2.906977e-07   p_cons 9.999994e-01   p_joint 2.034884e-05

Joint ci ratio: 4.652136e-01	ci left: 1.581697e-05	ci right 2.563494e-05	k: 70	n:3450000
Cons ci ratio: 1.968011e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3449998	n:3450000
KS ci ratio: 2.771857e+00	ci left: 7.338495e-09	ci right 1.614968e-06	k: 1	n:3450000
ZNF878   3450000 perm   5349 sec   (645 perm/sec)   p_kst 2.898551e-07   p_cons 9.999994e-01   p_joint 2.028986e-05

Joint ci ratio: 4.652136e-01	ci left: 1.577126e-05	ci right 2.556085e-05	k: 70	n:3460000
Cons ci ratio: 1.962323e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3459998	n:3460000
KS ci ratio: 2.771857e+00	ci left: 7.317286e-09	ci right 1.610300e-06	k: 1	n:3460000
ZNF878   3460000 perm   5377 sec   (643 perm/sec)   p_kst 2.890173e-07   p_cons 9.999994e-01   p_joint 2.023121e-05

Joint ci ratio: 4.652136e-01	ci left: 1.572581e-05	ci right 2.548719e-05	k: 70	n:3470000
Cons ci ratio: 1.956668e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3469998	n:3470000
KS ci ratio: 2.771857e+00	ci left: 7.296198e-09	ci right 1.605660e-06	k: 1	n:3470000
ZNF878   3470000 perm   5405 sec   (642 perm/sec)   p_kst 2.881844e-07   p_cons 9.999994e-01   p_joint 2.017291e-05

Joint ci ratio: 4.652136e-01	ci left: 1.568062e-05	ci right 2.541395e-05	k: 70	n:3480000
Cons ci ratio: 1.951045e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3479998	n:3480000
KS ci ratio: 2.771857e+00	ci left: 7.275232e-09	ci right 1.601046e-06	k: 1	n:3480000
ZNF878   3480000 perm   5433 sec   (641 perm/sec)   p_kst 2.873563e-07   p_cons 9.999994e-01   p_joint 2.011494e-05

Joint ci ratio: 4.619716e-01	ci left: 1.588874e-05	ci right 2.566092e-05	k: 71	n:3490000
Cons ci ratio: 1.945455e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3489998	n:3490000
KS ci ratio: 2.771857e+00	ci left: 7.254386e-09	ci right 1.596458e-06	k: 1	n:3490000
ZNF878   3490000 perm   5461 sec   (639 perm/sec)   p_kst 2.865330e-07   p_cons 9.999994e-01   p_joint 2.034384e-05

Joint ci ratio: 4.619716e-01	ci left: 1.584334e-05	ci right 2.558760e-05	k: 71	n:3500000
Cons ci ratio: 1.939896e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3499998	n:3500000
KS ci ratio: 2.771857e+00	ci left: 7.233659e-09	ci right 1.591897e-06	k: 1	n:3500000
ZNF878   3500000 perm   5488 sec   (638 perm/sec)   p_kst 2.857143e-07   p_cons 9.999994e-01   p_joint 2.028571e-05

Joint ci ratio: 4.619716e-01	ci left: 1.579821e-05	ci right 2.551470e-05	k: 71	n:3510000
Cons ci ratio: 1.934370e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3509998	n:3510000
KS ci ratio: 2.771857e+00	ci left: 7.213051e-09	ci right 1.587362e-06	k: 1	n:3510000
ZNF878   3510000 perm   5517 sec   (636 perm/sec)   p_kst 2.849003e-07   p_cons 9.999994e-01   p_joint 2.022792e-05

Joint ci ratio: 4.619716e-01	ci left: 1.575332e-05	ci right 2.544222e-05	k: 71	n:3520000
Cons ci ratio: 1.928874e-06	ci left: 9.999979e-01	ci right 9.999999e-01	k: 3519998	n:3520000
KS ci ratio: 2.771857e+00	ci left: 7.192559e-09	ci right 1.582852e-06	k: 1	n:3520000
ZNF878   3520000 perm   5544 sec   (635 perm/sec)   p_kst 2.840909e-07   p_cons 9.999994e-01   p_joint 2.017045e-05

Joint ci ratio: 4.619717e-01	ci left: 1.570870e-05	ci right 2.537014e-05	k: 71	n:3530000
Cons ci ratio: 1.923410e-06	ci left: 9.999980e-01	ci right 9.999999e-01	k: 3529998	n:3530000
KS ci ratio: 2.771857e+00	ci left: 7.172184e-09	ci right 1.578368e-06	k: 1	n:3530000
ZNF878   3530000 perm   5573 sec   (633 perm/sec)   p_kst 2.832861e-07   p_cons 9.999994e-01   p_joint 2.011331e-05

Joint ci ratio: 4.619717e-01	ci left: 1.566432e-05	ci right 2.529848e-05	k: 71	n:3540000
Cons ci ratio: 1.917977e-06	ci left: 9.999980e-01	ci right 9.999999e-01	k: 3539998	n:3540000
KS ci ratio: 2.771857e+00	ci left: 7.151923e-09	ci right 1.573910e-06	k: 1	n:3540000
ZNF878   3540000 perm   5600 sec   (632 perm/sec)   p_kst 2.824859e-07   p_cons 9.999994e-01   p_joint 2.005650e-05

Joint ci ratio: 4.587965e-01	ci left: 1.586921e-05	ci right 2.554136e-05	k: 72	n:3550000
Cons ci ratio: 1.912574e-06	ci left: 9.999980e-01	ci right 9.999999e-01	k: 3549998	n:3550000
KS ci ratio: 2.771857e+00	ci left: 7.131777e-09	ci right 1.569476e-06	k: 1	n:3550000
ZNF878   3550000 perm   5629 sec   (631 perm/sec)   p_kst 2.816901e-07   p_cons 9.999994e-01   p_joint 2.028169e-05

Joint ci ratio: 4.587965e-01	ci left: 1.582463e-05	ci right 2.546962e-05	k: 72	n:3560000
Cons ci ratio: 2.202247e-06	ci left: 9.999975e-01	ci right 9.999998e-01	k: 3559997	n:3560000
KS ci ratio: 2.771857e+00	ci left: 7.111744e-09	ci right 1.565067e-06	k: 1	n:3560000
ZNF878   3560000 perm   5657 sec   (629 perm/sec)   p_kst 2.808989e-07   p_cons 9.999992e-01   p_joint 2.022472e-05

Joint ci ratio: 4.685250e-01	ci left: 1.503816e-05	ci right 2.446042e-05	k: 69	n:3570000
Cons ci ratio: 2.196078e-06	ci left: 9.999975e-01	ci right 9.999998e-01	k: 3569997	n:3570000
KS ci ratio: 2.771857e+00	ci left: 7.091823e-09	ci right 1.560683e-06	k: 1	n:3570000
ZNF878   3570000 perm   5685 sec   (628 perm/sec)   p_kst 2.801120e-07   p_cons 9.999992e-01   p_joint 1.932773e-05

Joint ci ratio: 4.685250e-01	ci left: 1.499615e-05	ci right 2.439209e-05	k: 69	n:3580000
Cons ci ratio: 2.189944e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3579997	n:3580000
KS ci ratio: 2.771857e+00	ci left: 7.072013e-09	ci right 1.556324e-06	k: 1	n:3580000
ZNF878   3580000 perm   5714 sec   (627 perm/sec)   p_kst 2.793296e-07   p_cons 9.999992e-01   p_joint 1.927374e-05

Joint ci ratio: 4.685250e-01	ci left: 1.495438e-05	ci right 2.432415e-05	k: 69	n:3590000
Cons ci ratio: 2.183844e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3589997	n:3590000
KS ci ratio: 2.771857e+00	ci left: 7.052314e-09	ci right 1.551989e-06	k: 1	n:3590000
ZNF878   3590000 perm   5743 sec   (625 perm/sec)   p_kst 2.785515e-07   p_cons 9.999992e-01   p_joint 1.922006e-05

Joint ci ratio: 4.619717e-01	ci left: 1.540325e-05	ci right 2.487684e-05	k: 71	n:3600000
Cons ci ratio: 2.177777e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3599997	n:3600000
KS ci ratio: 2.771857e+00	ci left: 7.032724e-09	ci right 1.547678e-06	k: 1	n:3600000
ZNF878   3600000 perm   5772 sec   (624 perm/sec)   p_kst 2.777778e-07   p_cons 9.999992e-01   p_joint 1.972222e-05

Joint ci ratio: 4.619718e-01	ci left: 1.536058e-05	ci right 2.480792e-05	k: 71	n:3610000
Cons ci ratio: 2.171745e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3609997	n:3610000
KS ci ratio: 2.771857e+00	ci left: 7.013243e-09	ci right 1.543391e-06	k: 1	n:3610000
ZNF878   3610000 perm   5801 sec   (622 perm/sec)   p_kst 2.770083e-07   p_cons 9.999992e-01   p_joint 1.966759e-05

Joint ci ratio: 4.587966e-01	ci left: 1.556234e-05	ci right 2.504747e-05	k: 72	n:3620000
Cons ci ratio: 2.165746e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3619997	n:3620000
KS ci ratio: 2.771857e+00	ci left: 6.993870e-09	ci right 1.539127e-06	k: 1	n:3620000
ZNF878   3620000 perm   5830 sec   (621 perm/sec)   p_kst 2.762431e-07   p_cons 9.999992e-01   p_joint 1.988950e-05

Joint ci ratio: 4.587966e-01	ci left: 1.551947e-05	ci right 2.497847e-05	k: 72	n:3630000
Cons ci ratio: 2.159779e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3629997	n:3630000
KS ci ratio: 2.771857e+00	ci left: 6.974603e-09	ci right 1.534887e-06	k: 1	n:3630000
ZNF878   3630000 perm   5859 sec   (620 perm/sec)   p_kst 2.754821e-07   p_cons 9.999992e-01   p_joint 1.983471e-05

Joint ci ratio: 4.587966e-01	ci left: 1.547683e-05	ci right 2.490985e-05	k: 72	n:3640000
Cons ci ratio: 2.153846e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3639997	n:3640000
KS ci ratio: 2.771857e+00	ci left: 6.955442e-09	ci right 1.530670e-06	k: 1	n:3640000
ZNF878   3640000 perm   5888 sec   (618 perm/sec)   p_kst 2.747253e-07   p_cons 9.999992e-01   p_joint 1.978022e-05

Joint ci ratio: 4.556861e-01	ci left: 1.567684e-05	ci right 2.514693e-05	k: 73	n:3650000
Cons ci ratio: 2.147945e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3649997	n:3650000
KS ci ratio: 2.771857e+00	ci left: 6.936386e-09	ci right 1.526477e-06	k: 1	n:3650000
ZNF878   3650000 perm   5917 sec   (617 perm/sec)   p_kst 2.739726e-07   p_cons 9.999992e-01   p_joint 2.000000e-05

Joint ci ratio: 4.556861e-01	ci left: 1.563401e-05	ci right 2.507823e-05	k: 73	n:3660000
Cons ci ratio: 2.142076e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3659997	n:3660000
KS ci ratio: 2.771857e+00	ci left: 6.917434e-09	ci right 1.522306e-06	k: 1	n:3660000
ZNF878   3660000 perm   5946 sec   (616 perm/sec)   p_kst 2.732240e-07   p_cons 9.999992e-01   p_joint 1.994536e-05

Joint ci ratio: 4.556861e-01	ci left: 1.559141e-05	ci right 2.500989e-05	k: 73	n:3670000
Cons ci ratio: 2.136239e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3669997	n:3670000
KS ci ratio: 2.771857e+00	ci left: 6.898585e-09	ci right 1.518158e-06	k: 1	n:3670000
ZNF878   3670000 perm   5975 sec   (614 perm/sec)   p_kst 2.724796e-07   p_cons 9.999992e-01   p_joint 1.989101e-05

Joint ci ratio: 4.556861e-01	ci left: 1.554904e-05	ci right 2.494193e-05	k: 73	n:3680000
Cons ci ratio: 2.130434e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3679997	n:3680000
KS ci ratio: 2.771857e+00	ci left: 6.879839e-09	ci right 1.514033e-06	k: 1	n:3680000
ZNF878   3680000 perm   6004 sec   (613 perm/sec)   p_kst 2.717391e-07   p_cons 9.999992e-01   p_joint 1.983696e-05

Joint ci ratio: 4.526379e-01	ci left: 1.574689e-05	ci right 2.517615e-05	k: 74	n:3690000
Cons ci ratio: 2.124661e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3689997	n:3690000
KS ci ratio: 2.771857e+00	ci left: 6.861195e-09	ci right 1.509930e-06	k: 1	n:3690000
ZNF878   3690000 perm   6034 sec   (612 perm/sec)   p_kst 2.710027e-07   p_cons 9.999992e-01   p_joint 2.005420e-05

Joint ci ratio: 4.587967e-01	ci left: 1.522586e-05	ci right 2.450591e-05	k: 72	n:3700000
Cons ci ratio: 2.118919e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3699997	n:3700000
KS ci ratio: 2.771857e+00	ci left: 6.842651e-09	ci right 1.505849e-06	k: 1	n:3700000
ZNF878   3700000 perm   6063 sec   (610 perm/sec)   p_kst 2.702703e-07   p_cons 9.999992e-01   p_joint 1.945946e-05

Joint ci ratio: 4.587967e-01	ci left: 1.518482e-05	ci right 2.443985e-05	k: 72	n:3710000
Cons ci ratio: 2.113207e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3709997	n:3710000
KS ci ratio: 2.771857e+00	ci left: 6.824207e-09	ci right 1.501790e-06	k: 1	n:3710000
ZNF878   3710000 perm   6093 sec   (609 perm/sec)   p_kst 2.695418e-07   p_cons 9.999992e-01   p_joint 1.940701e-05

Joint ci ratio: 4.526380e-01	ci left: 1.561990e-05	ci right 2.497311e-05	k: 74	n:3720000
Cons ci ratio: 2.107527e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3719997	n:3720000
KS ci ratio: 2.771857e+00	ci left: 6.805862e-09	ci right 1.497753e-06	k: 1	n:3720000
ZNF878   3720000 perm   6123 sec   (608 perm/sec)   p_kst 2.688172e-07   p_cons 9.999992e-01   p_joint 1.989247e-05

Joint ci ratio: 4.526380e-01	ci left: 1.557802e-05	ci right 2.490616e-05	k: 74	n:3730000
Cons ci ratio: 2.101876e-06	ci left: 9.999976e-01	ci right 9.999998e-01	k: 3729997	n:3730000
KS ci ratio: 2.771857e+00	ci left: 6.787616e-09	ci right 1.493737e-06	k: 1	n:3730000
ZNF878   3730000 perm   6152 sec   (606 perm/sec)   p_kst 2.680965e-07   p_cons 9.999992e-01   p_joint 1.983914e-05

Joint ci ratio: 4.526380e-01	ci left: 1.553637e-05	ci right 2.483957e-05	k: 74	n:3740000
Cons ci ratio: 2.096256e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3739997	n:3740000
KS ci ratio: 2.771857e+00	ci left: 6.769467e-09	ci right 1.489743e-06	k: 1	n:3740000
ZNF878   3740000 perm   6181 sec   (605 perm/sec)   p_kst 2.673797e-07   p_cons 9.999992e-01   p_joint 1.978610e-05

Joint ci ratio: 4.526380e-01	ci left: 1.549494e-05	ci right 2.477333e-05	k: 74	n:3750000
Cons ci ratio: 2.090666e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3749997	n:3750000
KS ci ratio: 2.771857e+00	ci left: 6.751415e-09	ci right 1.485771e-06	k: 1	n:3750000
ZNF878   3750000 perm   6211 sec   (604 perm/sec)   p_kst 2.666667e-07   p_cons 9.999992e-01   p_joint 1.973333e-05

Joint ci ratio: 4.526380e-01	ci left: 1.545373e-05	ci right 2.470744e-05	k: 74	n:3760000
Cons ci ratio: 2.085106e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3759997	n:3760000
KS ci ratio: 2.771857e+00	ci left: 6.733460e-09	ci right 1.481819e-06	k: 1	n:3760000
ZNF878   3760000 perm   6241 sec   (602 perm/sec)   p_kst 2.659574e-07   p_cons 9.999992e-01   p_joint 1.968085e-05

Joint ci ratio: 4.526380e-01	ci left: 1.541274e-05	ci right 2.464191e-05	k: 74	n:3770000
Cons ci ratio: 2.079575e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3769997	n:3770000
KS ci ratio: 2.771857e+00	ci left: 6.715599e-09	ci right 1.477889e-06	k: 1	n:3770000
ZNF878   3770000 perm   6270 sec   (601 perm/sec)   p_kst 2.652520e-07   p_cons 9.999992e-01   p_joint 1.962865e-05

Joint ci ratio: 4.526381e-01	ci left: 1.537197e-05	ci right 2.457672e-05	k: 74	n:3780000
Cons ci ratio: 2.074074e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3779997	n:3780000
KS ci ratio: 2.771857e+00	ci left: 6.697833e-09	ci right 1.473979e-06	k: 1	n:3780000
ZNF878   3780000 perm   6299 sec   (600 perm/sec)   p_kst 2.645503e-07   p_cons 9.999992e-01   p_joint 1.957672e-05

Joint ci ratio: 4.526381e-01	ci left: 1.533141e-05	ci right 2.451187e-05	k: 74	n:3790000
Cons ci ratio: 2.068601e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3789997	n:3790000
KS ci ratio: 2.771857e+00	ci left: 6.680160e-09	ci right 1.470090e-06	k: 1	n:3790000
ZNF878   3790000 perm   6330 sec   (599 perm/sec)   p_kst 2.638522e-07   p_cons 9.999992e-01   p_joint 1.952507e-05

Joint ci ratio: 4.526381e-01	ci left: 1.529106e-05	ci right 2.444737e-05	k: 74	n:3800000
Cons ci ratio: 2.063158e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3799997	n:3800000
KS ci ratio: 2.771857e+00	ci left: 6.662581e-09	ci right 1.466221e-06	k: 1	n:3800000
ZNF878   3800000 perm   6360 sec   (597 perm/sec)   p_kst 2.631579e-07   p_cons 9.999992e-01   p_joint 1.947368e-05

Joint ci ratio: 4.496503e-01	ci left: 1.548356e-05	ci right 2.467531e-05	k: 75	n:3810000
Cons ci ratio: 2.057743e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3809997	n:3810000
KS ci ratio: 2.771857e+00	ci left: 6.645094e-09	ci right 1.462373e-06	k: 1	n:3810000
ZNF878   3810000 perm   6390 sec   (596 perm/sec)   p_kst 2.624672e-07   p_cons 9.999992e-01   p_joint 1.968504e-05

Joint ci ratio: 4.496503e-01	ci left: 1.544303e-05	ci right 2.461071e-05	k: 75	n:3820000
Cons ci ratio: 2.052356e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3819997	n:3820000
KS ci ratio: 2.771857e+00	ci left: 6.627698e-09	ci right 1.458545e-06	k: 1	n:3820000
ZNF878   3820000 perm   6420 sec   (595 perm/sec)   p_kst 2.617801e-07   p_cons 9.999992e-01   p_joint 1.963351e-05

Joint ci ratio: 4.496503e-01	ci left: 1.540271e-05	ci right 2.454645e-05	k: 75	n:3830000
Cons ci ratio: 2.046997e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3829997	n:3830000
KS ci ratio: 2.771857e+00	ci left: 6.610394e-09	ci right 1.454736e-06	k: 1	n:3830000
ZNF878   3830000 perm   6450 sec   (594 perm/sec)   p_kst 2.610966e-07   p_cons 9.999992e-01   p_joint 1.958225e-05

Joint ci ratio: 4.496503e-01	ci left: 1.536260e-05	ci right 2.448253e-05	k: 75	n:3840000
Cons ci ratio: 2.041666e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3839997	n:3840000
KS ci ratio: 2.771857e+00	ci left: 6.593179e-09	ci right 1.450948e-06	k: 1	n:3840000
ZNF878   3840000 perm   6481 sec   (593 perm/sec)   p_kst 2.604167e-07   p_cons 9.999992e-01   p_joint 1.953125e-05

Joint ci ratio: 4.496503e-01	ci left: 1.532269e-05	ci right 2.441894e-05	k: 75	n:3850000
Cons ci ratio: 2.036363e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3849997	n:3850000
KS ci ratio: 2.771858e+00	ci left: 6.576054e-09	ci right 1.447179e-06	k: 1	n:3850000
ZNF878   3850000 perm   6512 sec   (591 perm/sec)   p_kst 2.597403e-07   p_cons 9.999992e-01   p_joint 1.948052e-05

Joint ci ratio: 4.496504e-01	ci left: 1.528300e-05	ci right 2.435568e-05	k: 75	n:3860000
Cons ci ratio: 2.031088e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3859997	n:3860000
KS ci ratio: 2.771858e+00	ci left: 6.559018e-09	ci right 1.443430e-06	k: 1	n:3860000
ZNF878   3860000 perm   6543 sec   (590 perm/sec)   p_kst 2.590674e-07   p_cons 9.999992e-01   p_joint 1.943005e-05

Joint ci ratio: 4.496504e-01	ci left: 1.524351e-05	ci right 2.429274e-05	k: 75	n:3870000
Cons ci ratio: 2.025840e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 3869997	n:3870000
KS ci ratio: 2.771858e+00	ci left: 6.542069e-09	ci right 1.439700e-06	k: 1	n:3870000
ZNF878   3870000 perm   6574 sec   (589 perm/sec)   p_kst 2.583979e-07   p_cons 9.999992e-01   p_joint 1.937984e-05

Joint ci ratio: 4.496504e-01	ci left: 1.520422e-05	ci right 2.423013e-05	k: 75	n:3880000
Cons ci ratio: 2.259120e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3879996	n:3880000
KS ci ratio: 2.771858e+00	ci left: 6.525208e-09	ci right 1.435990e-06	k: 1	n:3880000
ZNF878   3880000 perm   6604 sec   (587 perm/sec)   p_kst 2.577320e-07   p_cons 9.999990e-01   p_joint 1.932990e-05

Joint ci ratio: 4.496504e-01	ci left: 1.516513e-05	ci right 2.416785e-05	k: 75	n:3890000
Cons ci ratio: 2.253313e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3889996	n:3890000
KS ci ratio: 2.771858e+00	ci left: 6.508434e-09	ci right 1.432298e-06	k: 1	n:3890000
ZNF878   3890000 perm   6635 sec   (586 perm/sec)   p_kst 2.570694e-07   p_cons 9.999990e-01   p_joint 1.928021e-05

Joint ci ratio: 4.587969e-01	ci left: 1.444504e-05	ci right 2.324920e-05	k: 72	n:3900000
Cons ci ratio: 2.247535e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3899996	n:3900000
KS ci ratio: 2.771858e+00	ci left: 6.491746e-09	ci right 1.428626e-06	k: 1	n:3900000
ZNF878   3900000 perm   6666 sec   (585 perm/sec)   p_kst 2.564103e-07   p_cons 9.999990e-01   p_joint 1.846154e-05

Joint ci ratio: 4.587970e-01	ci left: 1.440810e-05	ci right 2.318974e-05	k: 72	n:3910000
Cons ci ratio: 2.241787e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3909996	n:3910000
KS ci ratio: 2.771858e+00	ci left: 6.475143e-09	ci right 1.424972e-06	k: 1	n:3910000
ZNF878   3910000 perm   6697 sec   (584 perm/sec)   p_kst 2.557545e-07   p_cons 9.999990e-01   p_joint 1.841432e-05

Joint ci ratio: 4.587970e-01	ci left: 1.437134e-05	ci right 2.313058e-05	k: 72	n:3920000
Cons ci ratio: 2.236068e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3919996	n:3920000
KS ci ratio: 2.771858e+00	ci left: 6.458624e-09	ci right 1.421337e-06	k: 1	n:3920000
ZNF878   3920000 perm   6728 sec   (583 perm/sec)   p_kst 2.551020e-07   p_cons 9.999990e-01   p_joint 1.836735e-05

Joint ci ratio: 4.587970e-01	ci left: 1.433478e-05	ci right 2.307172e-05	k: 72	n:3930000
Cons ci ratio: 2.230378e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3929996	n:3930000
KS ci ratio: 2.771858e+00	ci left: 6.442190e-09	ci right 1.417720e-06	k: 1	n:3930000
ZNF878   3930000 perm   6761 sec   (581 perm/sec)   p_kst 2.544529e-07   p_cons 9.999990e-01   p_joint 1.832061e-05

Joint ci ratio: 4.587970e-01	ci left: 1.429839e-05	ci right 2.301316e-05	k: 72	n:3940000
Cons ci ratio: 2.224717e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3939996	n:3940000
KS ci ratio: 2.771858e+00	ci left: 6.425839e-09	ci right 1.414122e-06	k: 1	n:3940000
ZNF878   3940000 perm   6793 sec   (580 perm/sec)   p_kst 2.538071e-07   p_cons 9.999990e-01   p_joint 1.827411e-05

Joint ci ratio: 4.587970e-01	ci left: 1.426220e-05	ci right 2.295490e-05	k: 72	n:3950000
Cons ci ratio: 2.219085e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3949996	n:3950000
KS ci ratio: 2.771858e+00	ci left: 6.409572e-09	ci right 1.410542e-06	k: 1	n:3950000
ZNF878   3950000 perm   6825 sec   (579 perm/sec)   p_kst 2.531646e-07   p_cons 9.999990e-01   p_joint 1.822785e-05

Joint ci ratio: 4.587970e-01	ci left: 1.422618e-05	ci right 2.289694e-05	k: 72	n:3960000
Cons ci ratio: 2.213481e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3959996	n:3960000
KS ci ratio: 2.771858e+00	ci left: 6.393386e-09	ci right 1.406980e-06	k: 1	n:3960000
ZNF878   3960000 perm   6858 sec   (577 perm/sec)   p_kst 2.525253e-07   p_cons 9.999990e-01   p_joint 1.818182e-05

Joint ci ratio: 4.587970e-01	ci left: 1.419035e-05	ci right 2.283926e-05	k: 72	n:3970000
Cons ci ratio: 2.207906e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3969996	n:3970000
KS ci ratio: 2.771858e+00	ci left: 6.377281e-09	ci right 1.403436e-06	k: 1	n:3970000
ZNF878   3970000 perm   6891 sec   (576 perm/sec)   p_kst 2.518892e-07   p_cons 9.999990e-01   p_joint 1.813602e-05

Joint ci ratio: 4.556865e-01	ci left: 1.437700e-05	ci right 2.306189e-05	k: 73	n:3980000
Cons ci ratio: 2.202358e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3979996	n:3980000
KS ci ratio: 2.771858e+00	ci left: 6.361258e-09	ci right 1.399910e-06	k: 1	n:3980000
ZNF878   3980000 perm   6925 sec   (575 perm/sec)   p_kst 2.512563e-07   p_cons 9.999990e-01   p_joint 1.834171e-05

Joint ci ratio: 4.556865e-01	ci left: 1.434097e-05	ci right 2.300409e-05	k: 73	n:3990000
Cons ci ratio: 2.196839e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3989996	n:3990000
KS ci ratio: 2.771858e+00	ci left: 6.345315e-09	ci right 1.396401e-06	k: 1	n:3990000
ZNF878   3990000 perm   6957 sec   (573 perm/sec)   p_kst 2.506266e-07   p_cons 9.999990e-01   p_joint 1.829574e-05

Joint ci ratio: 4.496505e-01	ci left: 1.474809e-05	ci right 2.350323e-05	k: 75	n:4000000
Cons ci ratio: 2.191347e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 3999996	n:4000000
KS ci ratio: 2.771858e+00	ci left: 6.329452e-09	ci right 1.392910e-06	k: 1	n:4000000
ZNF878   4000000 perm   6991 sec   (572 perm/sec)   p_kst 2.500000e-07   p_cons 9.999990e-01   p_joint 1.875000e-05

Joint ci ratio: 4.496505e-01	ci left: 1.471131e-05	ci right 2.344462e-05	k: 75	n:4010000
Cons ci ratio: 2.185882e-06	ci left: 9.999974e-01	ci right 9.999997e-01	k: 4009996	n:4010000
KS ci ratio: 2.771858e+00	ci left: 6.313668e-09	ci right 1.389436e-06	k: 1	n:4010000
ZNF878   4010000 perm   7024 sec   (571 perm/sec)   p_kst 2.493766e-07   p_cons 9.999990e-01   p_joint 1.870324e-05

Joint ci ratio: 4.496505e-01	ci left: 1.467472e-05	ci right 2.338630e-05	k: 75	n:4020000
Cons ci ratio: 2.180444e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4019996	n:4020000
KS ci ratio: 2.771858e+00	ci left: 6.297962e-09	ci right 1.385980e-06	k: 1	n:4020000
ZNF878   4020000 perm   7058 sec   (570 perm/sec)   p_kst 2.487562e-07   p_cons 9.999990e-01   p_joint 1.865672e-05

Joint ci ratio: 4.496505e-01	ci left: 1.463830e-05	ci right 2.332827e-05	k: 75	n:4030000
Cons ci ratio: 2.175034e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4029996	n:4030000
KS ci ratio: 2.771858e+00	ci left: 6.282334e-09	ci right 1.382541e-06	k: 1	n:4030000
ZNF878   4030000 perm   7093 sec   (568 perm/sec)   p_kst 2.481390e-07   p_cons 9.999990e-01   p_joint 1.861042e-05

Joint ci ratio: 4.496506e-01	ci left: 1.460207e-05	ci right 2.327053e-05	k: 75	n:4040000
Cons ci ratio: 2.169650e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4039996	n:4040000
KS ci ratio: 2.771858e+00	ci left: 6.266784e-09	ci right 1.379119e-06	k: 1	n:4040000
ZNF878   4040000 perm   7128 sec   (567 perm/sec)   p_kst 2.475248e-07   p_cons 9.999990e-01   p_joint 1.856436e-05

Joint ci ratio: 4.496506e-01	ci left: 1.456602e-05	ci right 2.321307e-05	k: 75	n:4050000
Cons ci ratio: 2.164293e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4049996	n:4050000
KS ci ratio: 2.771858e+00	ci left: 6.251311e-09	ci right 1.375714e-06	k: 1	n:4050000
ZNF878   4050000 perm   7165 sec   (565 perm/sec)   p_kst 2.469136e-07   p_cons 9.999990e-01   p_joint 1.851852e-05

Joint ci ratio: 4.496506e-01	ci left: 1.453014e-05	ci right 2.315589e-05	k: 75	n:4060000
Cons ci ratio: 2.158962e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4059996	n:4060000
KS ci ratio: 2.771858e+00	ci left: 6.235913e-09	ci right 1.372325e-06	k: 1	n:4060000
ZNF878   4060000 perm   7203 sec   (564 perm/sec)   p_kst 2.463054e-07   p_cons 9.999990e-01   p_joint 1.847291e-05

Joint ci ratio: 4.467212e-01	ci left: 1.471240e-05	ci right 2.337226e-05	k: 76	n:4070000
Cons ci ratio: 2.153658e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4069996	n:4070000
KS ci ratio: 2.771858e+00	ci left: 6.220592e-09	ci right 1.368953e-06	k: 1	n:4070000
ZNF878   4070000 perm   7240 sec   (562 perm/sec)   p_kst 2.457002e-07   p_cons 9.999990e-01   p_joint 1.867322e-05

Joint ci ratio: 4.467212e-01	ci left: 1.467634e-05	ci right 2.331498e-05	k: 76	n:4080000
Cons ci ratio: 2.148379e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4079996	n:4080000
KS ci ratio: 2.771858e+00	ci left: 6.205345e-09	ci right 1.365598e-06	k: 1	n:4080000
ZNF878   4080000 perm   7277 sec   (561 perm/sec)   p_kst 2.450980e-07   p_cons 9.999990e-01   p_joint 1.862745e-05

Joint ci ratio: 4.410301e-01	ci left: 1.507479e-05	ci right 2.380130e-05	k: 78	n:4090000
Cons ci ratio: 2.143126e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4089996	n:4090000
KS ci ratio: 2.771858e+00	ci left: 6.190173e-09	ci right 1.362259e-06	k: 1	n:4090000
ZNF878   4090000 perm   7315 sec   (559 perm/sec)   p_kst 2.444988e-07   p_cons 9.999990e-01   p_joint 1.907090e-05

Joint ci ratio: 4.719085e-01	ci left: 1.287921e-05	ci right 2.102586e-05	k: 68	n:4100000
Cons ci ratio: 2.137899e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4099996	n:4100000
KS ci ratio: 2.771858e+00	ci left: 6.175075e-09	ci right 1.358937e-06	k: 1	n:4100000
ZNF878   4100000 perm   7350 sec   (558 perm/sec)   p_kst 2.439024e-07   p_cons 9.999990e-01   p_joint 1.658537e-05

Joint ci ratio: 4.719085e-01	ci left: 1.284787e-05	ci right 2.097470e-05	k: 68	n:4110000
Cons ci ratio: 2.132697e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4109996	n:4110000
KS ci ratio: 2.771858e+00	ci left: 6.160051e-09	ci right 1.355630e-06	k: 1	n:4110000
ZNF878   4110000 perm   7388 sec   (556 perm/sec)   p_kst 2.433090e-07   p_cons 9.999990e-01   p_joint 1.654501e-05

Joint ci ratio: 4.719085e-01	ci left: 1.281669e-05	ci right 2.092379e-05	k: 68	n:4120000
Cons ci ratio: 2.127521e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4119996	n:4120000
KS ci ratio: 2.771858e+00	ci left: 6.145099e-09	ci right 1.352340e-06	k: 1	n:4120000
ZNF878   4120000 perm   7432 sec   (554 perm/sec)   p_kst 2.427184e-07   p_cons 9.999990e-01   p_joint 1.650485e-05

Joint ci ratio: 4.719085e-01	ci left: 1.278565e-05	ci right 2.087313e-05	k: 68	n:4130000
Cons ci ratio: 2.122370e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4129996	n:4130000
KS ci ratio: 2.771858e+00	ci left: 6.130220e-09	ci right 1.349065e-06	k: 1	n:4130000
ZNF878   4130000 perm   7470 sec   (553 perm/sec)   p_kst 2.421308e-07   p_cons 9.999990e-01   p_joint 1.646489e-05

Joint ci ratio: 4.719086e-01	ci left: 1.275477e-05	ci right 2.082271e-05	k: 68	n:4140000
Cons ci ratio: 2.117243e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4139996	n:4140000
KS ci ratio: 2.771858e+00	ci left: 6.115413e-09	ci right 1.345807e-06	k: 1	n:4140000
ZNF878   4140000 perm   7507 sec   (551 perm/sec)   p_kst 2.415459e-07   p_cons 9.999990e-01   p_joint 1.642512e-05

Joint ci ratio: 4.719086e-01	ci left: 1.272404e-05	ci right 2.077253e-05	k: 68	n:4150000
Cons ci ratio: 2.112141e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4149996	n:4150000
KS ci ratio: 2.771858e+00	ci left: 6.100677e-09	ci right 1.342564e-06	k: 1	n:4150000
ZNF878   4150000 perm   7549 sec   (550 perm/sec)   p_kst 2.409639e-07   p_cons 9.999990e-01   p_joint 1.638554e-05

Joint ci ratio: 4.719086e-01	ci left: 1.269345e-05	ci right 2.072260e-05	k: 68	n:4160000
Cons ci ratio: 2.107064e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4159996	n:4160000
KS ci ratio: 2.771858e+00	ci left: 6.086011e-09	ci right 1.339337e-06	k: 1	n:4160000
ZNF878   4160000 perm   7590 sec   (548 perm/sec)   p_kst 2.403846e-07   p_cons 9.999990e-01   p_joint 1.634615e-05

Joint ci ratio: 4.719086e-01	ci left: 1.266301e-05	ci right 2.067291e-05	k: 68	n:4170000
Cons ci ratio: 2.102011e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4169996	n:4170000
KS ci ratio: 2.771858e+00	ci left: 6.071417e-09	ci right 1.336125e-06	k: 1	n:4170000
ZNF878   4170000 perm   7631 sec   (546 perm/sec)   p_kst 2.398082e-07   p_cons 9.999990e-01   p_joint 1.630695e-05

Joint ci ratio: 4.719086e-01	ci left: 1.263272e-05	ci right 2.062345e-05	k: 68	n:4180000
Cons ci ratio: 2.096982e-06	ci left: 9.999975e-01	ci right 9.999997e-01	k: 4179996	n:4180000
KS ci ratio: 2.771858e+00	ci left: 6.056892e-09	ci right 1.332928e-06	k: 1	n:4180000
ZNF878   4180000 perm   7671 sec   (545 perm/sec)   p_kst 2.392344e-07   p_cons 9.999990e-01   p_joint 1.626794e-05

Joint ci ratio: 4.719086e-01	ci left: 1.260257e-05	ci right 2.057423e-05	k: 68	n:4190000
Cons ci ratio: 2.091978e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4189996	n:4190000
KS ci ratio: 2.771858e+00	ci left: 6.042436e-09	ci right 1.329747e-06	k: 1	n:4190000
ZNF878   4190000 perm   7710 sec   (543 perm/sec)   p_kst 2.386635e-07   p_cons 9.999990e-01   p_joint 1.622912e-05

Joint ci ratio: 4.719086e-01	ci left: 1.257256e-05	ci right 2.052524e-05	k: 68	n:4200000
Cons ci ratio: 2.086997e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4199996	n:4200000
KS ci ratio: 2.771858e+00	ci left: 6.028049e-09	ci right 1.326581e-06	k: 1	n:4200000
ZNF878   4200000 perm   7751 sec   (542 perm/sec)   p_kst 2.380952e-07   p_cons 9.999990e-01   p_joint 1.619048e-05

Joint ci ratio: 4.719086e-01	ci left: 1.254270e-05	ci right 2.047649e-05	k: 68	n:4210000
Cons ci ratio: 2.082040e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4209996	n:4210000
KS ci ratio: 2.771858e+00	ci left: 6.013731e-09	ci right 1.323430e-06	k: 1	n:4210000
ZNF878   4210000 perm   7800 sec   (540 perm/sec)   p_kst 2.375297e-07   p_cons 9.999990e-01   p_joint 1.615202e-05

Joint ci ratio: 4.719086e-01	ci left: 1.251297e-05	ci right 2.042797e-05	k: 68	n:4220000
Cons ci ratio: 2.077106e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4219996	n:4220000
KS ci ratio: 2.771858e+00	ci left: 5.999481e-09	ci right 1.320294e-06	k: 1	n:4220000
ZNF878   4220000 perm   7841 sec   (538 perm/sec)   p_kst 2.369668e-07   p_cons 9.999991e-01   p_joint 1.611374e-05

Joint ci ratio: 4.719086e-01	ci left: 1.248339e-05	ci right 2.037967e-05	k: 68	n:4230000
Cons ci ratio: 2.072195e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4229996	n:4230000
KS ci ratio: 2.771858e+00	ci left: 5.985298e-09	ci right 1.317173e-06	k: 1	n:4230000
ZNF878   4230000 perm   7888 sec   (536 perm/sec)   p_kst 2.364066e-07   p_cons 9.999991e-01   p_joint 1.607565e-05

Joint ci ratio: 4.825148e-01	ci left: 1.183154e-05	ci right 1.953954e-05	k: 65	n:4240000
Cons ci ratio: 2.067308e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4239996	n:4240000
KS ci ratio: 2.771858e+00	ci left: 5.971181e-09	ci right 1.314066e-06	k: 1	n:4240000
ZNF878   4240000 perm   7931 sec   (535 perm/sec)   p_kst 2.358491e-07   p_cons 9.999991e-01   p_joint 1.533019e-05

Joint ci ratio: 4.825148e-01	ci left: 1.180370e-05	ci right 1.949357e-05	k: 65	n:4250000
Cons ci ratio: 2.062444e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4249996	n:4250000
KS ci ratio: 2.771858e+00	ci left: 5.957131e-09	ci right 1.310974e-06	k: 1	n:4250000
ZNF878   4250000 perm   7970 sec   (533 perm/sec)   p_kst 2.352941e-07   p_cons 9.999991e-01   p_joint 1.529412e-05

Joint ci ratio: 4.825149e-01	ci left: 1.177599e-05	ci right 1.944781e-05	k: 65	n:4260000
Cons ci ratio: 2.057602e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4259996	n:4260000
KS ci ratio: 2.771858e+00	ci left: 5.943147e-09	ci right 1.307897e-06	k: 1	n:4260000
ZNF878   4260000 perm   8014 sec   (532 perm/sec)   p_kst 2.347418e-07   p_cons 9.999991e-01   p_joint 1.525822e-05

Joint ci ratio: 4.825149e-01	ci left: 1.174841e-05	ci right 1.940226e-05	k: 65	n:4270000
Cons ci ratio: 2.052784e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4269996	n:4270000
KS ci ratio: 2.771858e+00	ci left: 5.929229e-09	ci right 1.304834e-06	k: 1	n:4270000
ZNF878   4270000 perm   8067 sec   (529 perm/sec)   p_kst 2.341920e-07   p_cons 9.999991e-01   p_joint 1.522248e-05

Joint ci ratio: 4.825149e-01	ci left: 1.172096e-05	ci right 1.935693e-05	k: 65	n:4280000
Cons ci ratio: 2.047987e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4279996	n:4280000
KS ci ratio: 2.771858e+00	ci left: 5.915376e-09	ci right 1.301785e-06	k: 1	n:4280000
ZNF878   4280000 perm   8117 sec   (527 perm/sec)   p_kst 2.336449e-07   p_cons 9.999991e-01   p_joint 1.518692e-05

Joint ci ratio: 4.825149e-01	ci left: 1.169364e-05	ci right 1.931181e-05	k: 65	n:4290000
Cons ci ratio: 2.043214e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4289996	n:4290000
KS ci ratio: 2.771858e+00	ci left: 5.901587e-09	ci right 1.298751e-06	k: 1	n:4290000
ZNF878   4290000 perm   8164 sec   (525 perm/sec)   p_kst 2.331002e-07   p_cons 9.999991e-01   p_joint 1.515152e-05

Joint ci ratio: 4.825149e-01	ci left: 1.166644e-05	ci right 1.926690e-05	k: 65	n:4300000
Cons ci ratio: 2.038462e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4299996	n:4300000
KS ci ratio: 2.771858e+00	ci left: 5.887862e-09	ci right 1.295730e-06	k: 1	n:4300000
ZNF878   4300000 perm   8220 sec   (523 perm/sec)   p_kst 2.325581e-07   p_cons 9.999991e-01   p_joint 1.511628e-05

Joint ci ratio: 4.825149e-01	ci left: 1.163938e-05	ci right 1.922220e-05	k: 65	n:4310000
Cons ci ratio: 2.033732e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4309996	n:4310000
KS ci ratio: 2.771858e+00	ci left: 5.874201e-09	ci right 1.292724e-06	k: 1	n:4310000
ZNF878   4310000 perm   8268 sec   (521 perm/sec)   p_kst 2.320186e-07   p_cons 9.999991e-01   p_joint 1.508121e-05

Joint ci ratio: 4.789005e-01	ci left: 1.181585e-05	ci right 1.943704e-05	k: 66	n:4320000
Cons ci ratio: 2.029025e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4319996	n:4320000
KS ci ratio: 2.771858e+00	ci left: 5.860604e-09	ci right 1.289732e-06	k: 1	n:4320000
ZNF878   4320000 perm   8317 sec   (519 perm/sec)   p_kst 2.314815e-07   p_cons 9.999991e-01   p_joint 1.527778e-05

Joint ci ratio: 4.789005e-01	ci left: 1.178856e-05	ci right 1.939215e-05	k: 66	n:4330000
Cons ci ratio: 2.024339e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4329996	n:4330000
KS ci ratio: 2.771858e+00	ci left: 5.847069e-09	ci right 1.286753e-06	k: 1	n:4330000
ZNF878   4330000 perm   8375 sec   (517 perm/sec)   p_kst 2.309469e-07   p_cons 9.999991e-01   p_joint 1.524249e-05

Joint ci ratio: 4.789005e-01	ci left: 1.176140e-05	ci right 1.934747e-05	k: 66	n:4340000
Cons ci ratio: 2.019674e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4339996	n:4340000
KS ci ratio: 2.771858e+00	ci left: 5.833596e-09	ci right 1.283788e-06	k: 1	n:4340000
ZNF878   4340000 perm   8434 sec   (515 perm/sec)   p_kst 2.304147e-07   p_cons 9.999991e-01   p_joint 1.520737e-05

Joint ci ratio: 4.753661e-01	ci left: 1.193659e-05	ci right 1.956033e-05	k: 67	n:4350000
Cons ci ratio: 2.015031e-06	ci left: 9.999976e-01	ci right 9.999997e-01	k: 4349996	n:4350000
KS ci ratio: 2.771858e+00	ci left: 5.820186e-09	ci right 1.280837e-06	k: 1	n:4350000
ZNF878   4350000 perm   8475 sec   (513 perm/sec)   p_kst 2.298851e-07   p_cons 9.999991e-01   p_joint 1.540230e-05

Joint ci ratio: 4.753661e-01	ci left: 1.190921e-05	ci right 1.951547e-05	k: 67	n:4360000
Cons ci ratio: 2.010410e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4359996	n:4360000
KS ci ratio: 2.771858e+00	ci left: 5.806837e-09	ci right 1.277899e-06	k: 1	n:4360000
ZNF878   4360000 perm   8534 sec   (511 perm/sec)   p_kst 2.293578e-07   p_cons 9.999991e-01   p_joint 1.536697e-05

Joint ci ratio: 4.753661e-01	ci left: 1.188196e-05	ci right 1.947081e-05	k: 67	n:4370000
Cons ci ratio: 2.005809e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4369996	n:4370000
KS ci ratio: 2.771858e+00	ci left: 5.793549e-09	ci right 1.274975e-06	k: 1	n:4370000
ZNF878   4370000 perm   8592 sec   (509 perm/sec)   p_kst 2.288330e-07   p_cons 9.999991e-01   p_joint 1.533181e-05

Joint ci ratio: 4.753661e-01	ci left: 1.185483e-05	ci right 1.942636e-05	k: 67	n:4380000
Cons ci ratio: 2.001230e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4379996	n:4380000
KS ci ratio: 2.771858e+00	ci left: 5.780321e-09	ci right 1.272064e-06	k: 1	n:4380000
ZNF878   4380000 perm   8649 sec   (506 perm/sec)   p_kst 2.283105e-07   p_cons 9.999991e-01   p_joint 1.529680e-05

Joint ci ratio: 4.753661e-01	ci left: 1.182783e-05	ci right 1.938211e-05	k: 67	n:4390000
Cons ci ratio: 1.996671e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4389996	n:4390000
KS ci ratio: 2.771858e+00	ci left: 5.767154e-09	ci right 1.269166e-06	k: 1	n:4390000
ZNF878   4390000 perm   8701 sec   (505 perm/sec)   p_kst 2.277904e-07   p_cons 9.999991e-01   p_joint 1.526196e-05

Joint ci ratio: 4.719088e-01	ci left: 1.200108e-05	ci right 1.959228e-05	k: 68	n:4400000
Cons ci ratio: 1.992133e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4399996	n:4400000
KS ci ratio: 2.771858e+00	ci left: 5.754047e-09	ci right 1.266282e-06	k: 1	n:4400000
ZNF878   4400000 perm   8762 sec   (502 perm/sec)   p_kst 2.272727e-07   p_cons 9.999991e-01   p_joint 1.545455e-05

Joint ci ratio: 4.719088e-01	ci left: 1.197387e-05	ci right 1.954785e-05	k: 68	n:4410000
Cons ci ratio: 1.987616e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4409996	n:4410000
KS ci ratio: 2.771858e+00	ci left: 5.741000e-09	ci right 1.263411e-06	k: 1	n:4410000
ZNF878   4410000 perm   8822 sec   (500 perm/sec)   p_kst 2.267574e-07   p_cons 9.999991e-01   p_joint 1.541950e-05

Joint ci ratio: 4.685259e-01	ci left: 1.214620e-05	ci right 1.975650e-05	k: 69	n:4420000
Cons ci ratio: 1.983119e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4419996	n:4420000
KS ci ratio: 2.771858e+00	ci left: 5.728011e-09	ci right 1.260552e-06	k: 1	n:4420000
ZNF878   4420000 perm   8880 sec   (498 perm/sec)   p_kst 2.262443e-07   p_cons 9.999991e-01   p_joint 1.561086e-05

Joint ci ratio: 4.685259e-01	ci left: 1.211878e-05	ci right 1.971190e-05	k: 69	n:4430000
Cons ci ratio: 1.978643e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4429996	n:4430000
KS ci ratio: 2.771858e+00	ci left: 5.715081e-09	ci right 1.257707e-06	k: 1	n:4430000
ZNF878   4430000 perm   8936 sec   (496 perm/sec)   p_kst 2.257336e-07   p_cons 9.999991e-01   p_joint 1.557562e-05

Joint ci ratio: 4.685259e-01	ci left: 1.209149e-05	ci right 1.966751e-05	k: 69	n:4440000
Cons ci ratio: 1.974186e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4439996	n:4440000
KS ci ratio: 2.771858e+00	ci left: 5.702209e-09	ci right 1.254874e-06	k: 1	n:4440000
ZNF878   4440000 perm   8998 sec   (493 perm/sec)   p_kst 2.252252e-07   p_cons 9.999991e-01   p_joint 1.554054e-05

Joint ci ratio: 4.685259e-01	ci left: 1.206432e-05	ci right 1.962331e-05	k: 69	n:4450000
Cons ci ratio: 1.969750e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4449996	n:4450000
KS ci ratio: 2.771858e+00	ci left: 5.689395e-09	ci right 1.252054e-06	k: 1	n:4450000
ZNF878   4450000 perm   9056 sec   (491 perm/sec)   p_kst 2.247191e-07   p_cons 9.999991e-01   p_joint 1.550562e-05

Joint ci ratio: 4.685259e-01	ci left: 1.203727e-05	ci right 1.957931e-05	k: 69	n:4460000
Cons ci ratio: 1.965333e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4459996	n:4460000
KS ci ratio: 2.771858e+00	ci left: 5.676638e-09	ci right 1.249247e-06	k: 1	n:4460000
ZNF878   4460000 perm   9115 sec   (489 perm/sec)   p_kst 2.242152e-07   p_cons 9.999991e-01   p_joint 1.547085e-05

Joint ci ratio: 4.685259e-01	ci left: 1.201034e-05	ci right 1.953551e-05	k: 69	n:4470000
Cons ci ratio: 1.960937e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4469996	n:4470000
KS ci ratio: 2.771858e+00	ci left: 5.663939e-09	ci right 1.246452e-06	k: 1	n:4470000
ZNF878   4470000 perm   9175 sec   (487 perm/sec)   p_kst 2.237136e-07   p_cons 9.999991e-01   p_joint 1.543624e-05

Joint ci ratio: 4.685259e-01	ci left: 1.198353e-05	ci right 1.949191e-05	k: 69	n:4480000
Cons ci ratio: 1.956559e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4479996	n:4480000
KS ci ratio: 2.771858e+00	ci left: 5.651297e-09	ci right 1.243670e-06	k: 1	n:4480000
ZNF878   4480000 perm   9238 sec   (485 perm/sec)   p_kst 2.232143e-07   p_cons 9.999991e-01   p_joint 1.540179e-05

Joint ci ratio: 4.978370e-01	ci left: 1.039203e-05	ci right 1.745143e-05	k: 61	n:4490000
Cons ci ratio: 1.952202e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4489996	n:4490000
KS ci ratio: 2.771858e+00	ci left: 5.638710e-09	ci right 1.240900e-06	k: 1	n:4490000
ZNF878   4490000 perm   9287 sec   (483 perm/sec)   p_kst 2.227171e-07   p_cons 9.999991e-01   p_joint 1.358575e-05

Joint ci ratio: 4.978370e-01	ci left: 1.036894e-05	ci right 1.741264e-05	k: 61	n:4500000
Cons ci ratio: 1.947864e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4499996	n:4500000
KS ci ratio: 2.771858e+00	ci left: 5.626179e-09	ci right 1.238142e-06	k: 1	n:4500000
ZNF878   4500000 perm   9341 sec   (482 perm/sec)   p_kst 2.222222e-07   p_cons 9.999991e-01   p_joint 1.355556e-05

Joint ci ratio: 4.978370e-01	ci left: 1.034595e-05	ci right 1.737404e-05	k: 61	n:4510000
Cons ci ratio: 1.943545e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4509996	n:4510000
KS ci ratio: 2.771858e+00	ci left: 5.613705e-09	ci right 1.235397e-06	k: 1	n:4510000
ZNF878   4510000 perm   9380 sec   (481 perm/sec)   p_kst 2.217295e-07   p_cons 9.999991e-01   p_joint 1.352550e-05

Joint ci ratio: 4.978370e-01	ci left: 1.032306e-05	ci right 1.733560e-05	k: 61	n:4520000
Cons ci ratio: 1.939245e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4519996	n:4520000
KS ci ratio: 2.771858e+00	ci left: 5.601285e-09	ci right 1.232664e-06	k: 1	n:4520000
ZNF878   4520000 perm   9420 sec   (480 perm/sec)   p_kst 2.212389e-07   p_cons 9.999991e-01   p_joint 1.349558e-05

Joint ci ratio: 4.978370e-01	ci left: 1.030027e-05	ci right 1.729733e-05	k: 61	n:4530000
Cons ci ratio: 1.934964e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4529996	n:4530000
KS ci ratio: 2.771858e+00	ci left: 5.588920e-09	ci right 1.229943e-06	k: 1	n:4530000
ZNF878   4530000 perm   9486 sec   (478 perm/sec)   p_kst 2.207506e-07   p_cons 9.999991e-01   p_joint 1.346578e-05

Joint ci ratio: 4.978370e-01	ci left: 1.027758e-05	ci right 1.725923e-05	k: 61	n:4540000
Cons ci ratio: 1.930702e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4539996	n:4540000
KS ci ratio: 2.771858e+00	ci left: 5.576610e-09	ci right 1.227234e-06	k: 1	n:4540000
ZNF878   4540000 perm   9547 sec   (476 perm/sec)   p_kst 2.202643e-07   p_cons 9.999991e-01   p_joint 1.343612e-05

Joint ci ratio: 4.978371e-01	ci left: 1.025500e-05	ci right 1.722130e-05	k: 61	n:4550000
Cons ci ratio: 1.926459e-06	ci left: 9.999977e-01	ci right 9.999998e-01	k: 4549996	n:4550000
KS ci ratio: 2.771858e+00	ci left: 5.564354e-09	ci right 1.224536e-06	k: 1	n:4550000
ZNF878   4550000 perm   9613 sec   (473 perm/sec)   p_kst 2.197802e-07   p_cons 9.999991e-01   p_joint 1.340659e-05

Joint ci ratio: 4.978371e-01	ci left: 1.023251e-05	ci right 1.718353e-05	k: 61	n:4560000
Cons ci ratio: 1.922234e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4559996	n:4560000
KS ci ratio: 2.771858e+00	ci left: 5.552151e-09	ci right 1.221851e-06	k: 1	n:4560000
ZNF878   4560000 perm   9680 sec   (471 perm/sec)   p_kst 2.192982e-07   p_cons 9.999991e-01   p_joint 1.337719e-05

Joint ci ratio: 4.978371e-01	ci left: 1.021012e-05	ci right 1.714593e-05	k: 61	n:4570000
Cons ci ratio: 1.918028e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4569996	n:4570000
KS ci ratio: 2.771858e+00	ci left: 5.540002e-09	ci right 1.219177e-06	k: 1	n:4570000
ZNF878   4570000 perm   9748 sec   (469 perm/sec)   p_kst 2.188184e-07   p_cons 9.999991e-01   p_joint 1.334792e-05

Joint ci ratio: 4.978371e-01	ci left: 1.018782e-05	ci right 1.710849e-05	k: 61	n:4580000
Cons ci ratio: 1.913840e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4579996	n:4580000
KS ci ratio: 2.771858e+00	ci left: 5.527906e-09	ci right 1.216515e-06	k: 1	n:4580000
ZNF878   4580000 perm   9813 sec   (467 perm/sec)   p_kst 2.183406e-07   p_cons 9.999991e-01   p_joint 1.331878e-05

Joint ci ratio: 4.978371e-01	ci left: 1.016563e-05	ci right 1.707122e-05	k: 61	n:4590000
Cons ci ratio: 1.909670e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4589996	n:4590000
KS ci ratio: 2.771858e+00	ci left: 5.515862e-09	ci right 1.213865e-06	k: 1	n:4590000
ZNF878   4590000 perm   9879 sec   (465 perm/sec)   p_kst 2.178649e-07   p_cons 9.999991e-01   p_joint 1.328976e-05

Joint ci ratio: 4.978371e-01	ci left: 1.014353e-05	ci right 1.703411e-05	k: 61	n:4600000
Cons ci ratio: 1.905519e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4599996	n:4600000
KS ci ratio: 2.771858e+00	ci left: 5.503871e-09	ci right 1.211226e-06	k: 1	n:4600000
ZNF878   4600000 perm   9947 sec   (462 perm/sec)   p_kst 2.173913e-07   p_cons 9.999991e-01   p_joint 1.326087e-05

Joint ci ratio: 4.978371e-01	ci left: 1.012153e-05	ci right 1.699716e-05	k: 61	n:4610000
Cons ci ratio: 1.901385e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4609996	n:4610000
KS ci ratio: 2.771858e+00	ci left: 5.491932e-09	ci right 1.208599e-06	k: 1	n:4610000
ZNF878   4610000 perm   10014 sec   (460 perm/sec)   p_kst 2.169197e-07   p_cons 9.999991e-01   p_joint 1.323210e-05

Joint ci ratio: 4.978371e-01	ci left: 1.009962e-05	ci right 1.696037e-05	k: 61	n:4620000
Cons ci ratio: 1.897270e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4619996	n:4620000
KS ci ratio: 2.771858e+00	ci left: 5.480045e-09	ci right 1.205983e-06	k: 1	n:4620000
ZNF878   4620000 perm   10071 sec   (459 perm/sec)   p_kst 2.164502e-07   p_cons 9.999991e-01   p_joint 1.320346e-05

Joint ci ratio: 4.978371e-01	ci left: 1.007780e-05	ci right 1.692374e-05	k: 61	n:4630000
Cons ci ratio: 1.893172e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4629996	n:4630000
KS ci ratio: 2.771858e+00	ci left: 5.468209e-09	ci right 1.203378e-06	k: 1	n:4630000
ZNF878   4630000 perm   10134 sec   (457 perm/sec)   p_kst 2.159827e-07   p_cons 9.999991e-01   p_joint 1.317495e-05

Joint ci ratio: 4.978371e-01	ci left: 1.005608e-05	ci right 1.688726e-05	k: 61	n:4640000
Cons ci ratio: 1.889092e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4639996	n:4640000
KS ci ratio: 2.771858e+00	ci left: 5.456424e-09	ci right 1.200785e-06	k: 1	n:4640000
ZNF878   4640000 perm   10201 sec   (455 perm/sec)   p_kst 2.155172e-07   p_cons 9.999991e-01   p_joint 1.314655e-05

Joint ci ratio: 4.978371e-01	ci left: 1.003446e-05	ci right 1.685095e-05	k: 61	n:4650000
Cons ci ratio: 1.885029e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4649996	n:4650000
KS ci ratio: 2.771858e+00	ci left: 5.444690e-09	ci right 1.198202e-06	k: 1	n:4650000
ZNF878   4650000 perm   10265 sec   (453 perm/sec)   p_kst 2.150538e-07   p_cons 9.999991e-01   p_joint 1.311828e-05

Joint ci ratio: 4.978371e-01	ci left: 1.001293e-05	ci right 1.681479e-05	k: 61	n:4660000
Cons ci ratio: 1.880984e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4659996	n:4660000
KS ci ratio: 2.771858e+00	ci left: 5.433006e-09	ci right 1.195631e-06	k: 1	n:4660000
ZNF878   4660000 perm   10328 sec   (451 perm/sec)   p_kst 2.145923e-07   p_cons 9.999991e-01   p_joint 1.309013e-05

Joint ci ratio: 4.978371e-01	ci left: 9.991485e-06	ci right 1.677878e-05	k: 61	n:4670000
Cons ci ratio: 1.876956e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4669996	n:4670000
KS ci ratio: 2.771858e+00	ci left: 5.421372e-09	ci right 1.193071e-06	k: 1	n:4670000
ZNF878   4670000 perm   10390 sec   (449 perm/sec)   p_kst 2.141328e-07   p_cons 9.999991e-01   p_joint 1.306210e-05

Joint ci ratio: 4.978371e-01	ci left: 9.970135e-06	ci right 1.674293e-05	k: 61	n:4680000
Cons ci ratio: 1.872946e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4679996	n:4680000
KS ci ratio: 2.771858e+00	ci left: 5.409788e-09	ci right 1.190522e-06	k: 1	n:4680000
ZNF878   4680000 perm   10453 sec   (448 perm/sec)   p_kst 2.136752e-07   p_cons 9.999991e-01   p_joint 1.303419e-05

Joint ci ratio: 4.978372e-01	ci left: 9.948877e-06	ci right 1.670723e-05	k: 61	n:4690000
Cons ci ratio: 1.868952e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4689996	n:4690000
KS ci ratio: 2.771858e+00	ci left: 5.398253e-09	ci right 1.187983e-06	k: 1	n:4690000
ZNF878   4690000 perm   10512 sec   (446 perm/sec)   p_kst 2.132196e-07   p_cons 9.999991e-01   p_joint 1.300640e-05

Joint ci ratio: 4.938702e-01	ci left: 1.011385e-05	ci right 1.691086e-05	k: 62	n:4700000
Cons ci ratio: 1.864976e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4699996	n:4700000
KS ci ratio: 2.771858e+00	ci left: 5.386768e-09	ci right 1.185455e-06	k: 1	n:4700000
ZNF878   4700000 perm   10579 sec   (444 perm/sec)   p_kst 2.127660e-07   p_cons 9.999991e-01   p_joint 1.319149e-05

Joint ci ratio: 4.938702e-01	ci left: 1.009238e-05	ci right 1.687496e-05	k: 62	n:4710000
Cons ci ratio: 1.861016e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4709996	n:4710000
KS ci ratio: 2.771858e+00	ci left: 5.375331e-09	ci right 1.182939e-06	k: 1	n:4710000
ZNF878   4710000 perm   10649 sec   (442 perm/sec)   p_kst 2.123142e-07   p_cons 9.999992e-01   p_joint 1.316348e-05

Joint ci ratio: 4.938702e-01	ci left: 1.007100e-05	ci right 1.683921e-05	k: 62	n:4720000
Cons ci ratio: 1.857073e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4719996	n:4720000
KS ci ratio: 2.771858e+00	ci left: 5.363942e-09	ci right 1.180432e-06	k: 1	n:4720000
ZNF878   4720000 perm   10716 sec   (440 perm/sec)   p_kst 2.118644e-07   p_cons 9.999992e-01   p_joint 1.313559e-05

Joint ci ratio: 4.938702e-01	ci left: 1.004971e-05	ci right 1.680361e-05	k: 62	n:4730000
Cons ci ratio: 1.853147e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4729996	n:4730000
KS ci ratio: 2.771858e+00	ci left: 5.352602e-09	ci right 1.177937e-06	k: 1	n:4730000
ZNF878   4730000 perm   10783 sec   (439 perm/sec)   p_kst 2.114165e-07   p_cons 9.999992e-01   p_joint 1.310782e-05

Joint ci ratio: 4.938702e-01	ci left: 1.002850e-05	ci right 1.676816e-05	k: 62	n:4740000
Cons ci ratio: 1.849238e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4739996	n:4740000
KS ci ratio: 2.771858e+00	ci left: 5.341310e-09	ci right 1.175452e-06	k: 1	n:4740000
ZNF878   4740000 perm   10843 sec   (437 perm/sec)   p_kst 2.109705e-07   p_cons 9.999992e-01   p_joint 1.308017e-05

Joint ci ratio: 4.938703e-01	ci left: 1.000739e-05	ci right 1.673285e-05	k: 62	n:4750000
Cons ci ratio: 1.845345e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4749996	n:4750000
KS ci ratio: 2.771858e+00	ci left: 5.330065e-09	ci right 1.172977e-06	k: 1	n:4750000
ZNF878   4750000 perm   10884 sec   (436 perm/sec)   p_kst 2.105263e-07   p_cons 9.999992e-01   p_joint 1.305263e-05

Joint ci ratio: 4.938703e-01	ci left: 9.986368e-06	ci right 1.669770e-05	k: 62	n:4760000
Cons ci ratio: 1.841468e-06	ci left: 9.999978e-01	ci right 9.999998e-01	k: 4759996	n:4760000
KS ci ratio: 2.771858e+00	ci left: 5.318867e-09	ci right 1.170513e-06	k: 1	n:4760000
ZNF878   4760000 perm   10936 sec   (435 perm/sec)   p_kst 2.100840e-07   p_cons 9.999992e-01   p_joint 1.302521e-05

Joint ci ratio: 4.938703e-01	ci left: 9.965432e-06	ci right 1.666270e-05	k: 62	n:4770000
Cons ci ratio: 1.837607e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4769996	n:4770000
KS ci ratio: 2.771858e+00	ci left: 5.307716e-09	ci right 1.168059e-06	k: 1	n:4770000
ZNF878   4770000 perm   11006 sec   (433 perm/sec)   p_kst 2.096436e-07   p_cons 9.999992e-01   p_joint 1.299790e-05

Joint ci ratio: 4.938703e-01	ci left: 9.944584e-06	ci right 1.662784e-05	k: 62	n:4780000
Cons ci ratio: 1.833763e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4779996	n:4780000
KS ci ratio: 2.771858e+00	ci left: 5.296612e-09	ci right 1.165615e-06	k: 1	n:4780000
ZNF878   4780000 perm   11074 sec   (432 perm/sec)   p_kst 2.092050e-07   p_cons 9.999992e-01   p_joint 1.297071e-05

Joint ci ratio: 4.938703e-01	ci left: 9.923823e-06	ci right 1.659312e-05	k: 62	n:4790000
Cons ci ratio: 1.829935e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4789996	n:4790000
KS ci ratio: 2.771858e+00	ci left: 5.285555e-09	ci right 1.163182e-06	k: 1	n:4790000
ZNF878   4790000 perm   11141 sec   (430 perm/sec)   p_kst 2.087683e-07   p_cons 9.999992e-01   p_joint 1.294363e-05

Joint ci ratio: 4.899967e-01	ci left: 1.008562e-05	ci right 1.679255e-05	k: 63	n:4800000
Cons ci ratio: 1.826122e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4799996	n:4800000
KS ci ratio: 2.771858e+00	ci left: 5.274543e-09	ci right 1.160758e-06	k: 1	n:4800000
ZNF878   4800000 perm   11196 sec   (429 perm/sec)   p_kst 2.083333e-07   p_cons 9.999992e-01   p_joint 1.312500e-05

Joint ci ratio: 4.899967e-01	ci left: 1.006466e-05	ci right 1.675763e-05	k: 63	n:4810000
Cons ci ratio: 1.822326e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4809996	n:4810000
KS ci ratio: 2.771858e+00	ci left: 5.263578e-09	ci right 1.158345e-06	k: 1	n:4810000
ZNF878   4810000 perm   11256 sec   (427 perm/sec)   p_kst 2.079002e-07   p_cons 9.999992e-01   p_joint 1.309771e-05

Joint ci ratio: 5.103374e-01	ci left: 9.137322e-06	ci right 1.555567e-05	k: 58	n:4820000
Cons ci ratio: 1.818545e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4819996	n:4820000
KS ci ratio: 2.771858e+00	ci left: 5.252657e-09	ci right 1.155942e-06	k: 1	n:4820000
ZNF878   4820000 perm   11322 sec   (426 perm/sec)   p_kst 2.074689e-07   p_cons 9.999992e-01   p_joint 1.203320e-05

Joint ci ratio: 5.103374e-01	ci left: 9.118404e-06	ci right 1.552346e-05	k: 58	n:4830000
Cons ci ratio: 1.814780e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4829996	n:4830000
KS ci ratio: 2.771858e+00	ci left: 5.241782e-09	ci right 1.153549e-06	k: 1	n:4830000
ZNF878   4830000 perm   11396 sec   (424 perm/sec)   p_kst 2.070393e-07   p_cons 9.999992e-01   p_joint 1.200828e-05

Joint ci ratio: 5.060666e-01	ci left: 9.279668e-06	ci right 1.572429e-05	k: 59	n:4840000
Cons ci ratio: 1.811030e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4839996	n:4840000
KS ci ratio: 2.771858e+00	ci left: 5.230952e-09	ci right 1.151165e-06	k: 1	n:4840000
ZNF878   4840000 perm   11461 sec   (422 perm/sec)   p_kst 2.066116e-07   p_cons 9.999992e-01   p_joint 1.219008e-05

Joint ci ratio: 5.060666e-01	ci left: 9.260535e-06	ci right 1.569187e-05	k: 59	n:4850000
Cons ci ratio: 1.807296e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4849996	n:4850000
KS ci ratio: 2.771858e+00	ci left: 5.220167e-09	ci right 1.148792e-06	k: 1	n:4850000
ZNF878   4850000 perm   11534 sec   (420 perm/sec)   p_kst 2.061856e-07   p_cons 9.999992e-01   p_joint 1.216495e-05

Joint ci ratio: 5.060666e-01	ci left: 9.241480e-06	ci right 1.565958e-05	k: 59	n:4860000
Cons ci ratio: 1.803577e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4859996	n:4860000
KS ci ratio: 2.771858e+00	ci left: 5.209426e-09	ci right 1.146428e-06	k: 1	n:4860000
ZNF878   4860000 perm   11594 sec   (419 perm/sec)   p_kst 2.057613e-07   p_cons 9.999992e-01   p_joint 1.213992e-05

Joint ci ratio: 5.019014e-01	ci left: 9.401721e-06	ci right 1.585868e-05	k: 60	n:4870000
Cons ci ratio: 1.799874e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4869996	n:4870000
KS ci ratio: 2.771858e+00	ci left: 5.198729e-09	ci right 1.144074e-06	k: 1	n:4870000
ZNF878   4870000 perm   11647 sec   (418 perm/sec)   p_kst 2.053388e-07   p_cons 9.999992e-01   p_joint 1.232033e-05

Joint ci ratio: 5.019014e-01	ci left: 9.382456e-06	ci right 1.582618e-05	k: 60	n:4880000
Cons ci ratio: 1.796186e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4879996	n:4880000
KS ci ratio: 2.771858e+00	ci left: 5.188076e-09	ci right 1.141730e-06	k: 1	n:4880000
ZNF878   4880000 perm   11705 sec   (417 perm/sec)   p_kst 2.049180e-07   p_cons 9.999992e-01   p_joint 1.229508e-05

Joint ci ratio: 5.019014e-01	ci left: 9.363268e-06	ci right 1.579382e-05	k: 60	n:4890000
Cons ci ratio: 1.792513e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4889996	n:4890000
KS ci ratio: 2.771858e+00	ci left: 5.177466e-09	ci right 1.139395e-06	k: 1	n:4890000
ZNF878   4890000 perm   11750 sec   (416 perm/sec)   p_kst 2.044990e-07   p_cons 9.999992e-01   p_joint 1.226994e-05

Joint ci ratio: 5.019014e-01	ci left: 9.344160e-06	ci right 1.576158e-05	k: 60	n:4900000
Cons ci ratio: 1.788854e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4899996	n:4900000
KS ci ratio: 2.771858e+00	ci left: 5.166900e-09	ci right 1.137070e-06	k: 1	n:4900000
ZNF878   4900000 perm   11793 sec   (415 perm/sec)   p_kst 2.040816e-07   p_cons 9.999992e-01   p_joint 1.224490e-05

Joint ci ratio: 5.019014e-01	ci left: 9.325129e-06	ci right 1.572948e-05	k: 60	n:4910000
Cons ci ratio: 1.785211e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4909996	n:4910000
KS ci ratio: 2.771858e+00	ci left: 5.156376e-09	ci right 1.134754e-06	k: 1	n:4910000
ZNF878   4910000 perm   11836 sec   (415 perm/sec)   p_kst 2.036660e-07   p_cons 9.999992e-01   p_joint 1.221996e-05

Joint ci ratio: 5.019014e-01	ci left: 9.306175e-06	ci right 1.569751e-05	k: 60	n:4920000
Cons ci ratio: 1.781583e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4919996	n:4920000
KS ci ratio: 2.771858e+00	ci left: 5.145896e-09	ci right 1.132447e-06	k: 1	n:4920000
ZNF878   4920000 perm   11895 sec   (414 perm/sec)   p_kst 2.032520e-07   p_cons 9.999992e-01   p_joint 1.219512e-05

Joint ci ratio: 5.019014e-01	ci left: 9.287299e-06	ci right 1.566567e-05	k: 60	n:4930000
Cons ci ratio: 1.777969e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4929996	n:4930000
KS ci ratio: 2.771858e+00	ci left: 5.135458e-09	ci right 1.130150e-06	k: 1	n:4930000
ZNF878   4930000 perm   11962 sec   (412 perm/sec)   p_kst 2.028398e-07   p_cons 9.999992e-01   p_joint 1.217039e-05

Joint ci ratio: 5.019014e-01	ci left: 9.268498e-06	ci right 1.563396e-05	k: 60	n:4940000
Cons ci ratio: 1.774370e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4939996	n:4940000
KS ci ratio: 2.771858e+00	ci left: 5.125062e-09	ci right 1.127863e-06	k: 1	n:4940000
ZNF878   4940000 perm   12032 sec   (411 perm/sec)   p_kst 2.024291e-07   p_cons 9.999992e-01   p_joint 1.214575e-05

Joint ci ratio: 5.019014e-01	ci left: 9.249774e-06	ci right 1.560238e-05	k: 60	n:4950000
Cons ci ratio: 1.770785e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4949996	n:4950000
KS ci ratio: 2.771858e+00	ci left: 5.114709e-09	ci right 1.125584e-06	k: 1	n:4950000
ZNF878   4950000 perm   12097 sec   (409 perm/sec)   p_kst 2.020202e-07   p_cons 9.999992e-01   p_joint 1.212121e-05

Joint ci ratio: 5.019014e-01	ci left: 9.231125e-06	ci right 1.557092e-05	k: 60	n:4960000
Cons ci ratio: 1.767215e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4959996	n:4960000
KS ci ratio: 2.771858e+00	ci left: 5.104397e-09	ci right 1.123315e-06	k: 1	n:4960000
ZNF878   4960000 perm   12163 sec   (408 perm/sec)   p_kst 2.016129e-07   p_cons 9.999992e-01   p_joint 1.209677e-05

Joint ci ratio: 5.019014e-01	ci left: 9.212552e-06	ci right 1.553959e-05	k: 60	n:4970000
Cons ci ratio: 1.763659e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4969996	n:4970000
KS ci ratio: 2.771858e+00	ci left: 5.094126e-09	ci right 1.121054e-06	k: 1	n:4970000
ZNF878   4970000 perm   12236 sec   (406 perm/sec)   p_kst 2.012072e-07   p_cons 9.999992e-01   p_joint 1.207243e-05

Joint ci ratio: 5.019014e-01	ci left: 9.194053e-06	ci right 1.550839e-05	k: 60	n:4980000
Cons ci ratio: 1.760118e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4979996	n:4980000
KS ci ratio: 2.771858e+00	ci left: 5.083897e-09	ci right 1.118803e-06	k: 1	n:4980000
ZNF878   4980000 perm   12311 sec   (405 perm/sec)   p_kst 2.008032e-07   p_cons 9.999992e-01   p_joint 1.204819e-05

Joint ci ratio: 5.019015e-01	ci left: 9.175628e-06	ci right 1.547731e-05	k: 60	n:4990000
Cons ci ratio: 1.756590e-06	ci left: 9.999979e-01	ci right 9.999998e-01	k: 4989996	n:4990000
KS ci ratio: 2.771858e+00	ci left: 5.073709e-09	ci right 1.116561e-06	k: 1	n:4990000
ZNF878   4990000 perm   12375 sec   (403 perm/sec)   p_kst 2.004008e-07   p_cons 9.999992e-01   p_joint 1.202405e-05

Joint ci ratio: 5.019015e-01	ci left: 9.157276e-06	ci right 1.544635e-05	k: 60	n:5000000
Cons ci ratio: 1.753077e-06	ci left: 9.999980e-01	ci right 9.999998e-01	k: 4999996	n:5000000
KS ci ratio: 2.771858e+00	ci left: 5.063562e-09	ci right 1.114328e-06	k: 1	n:5000000
ZNF878   5000000 perm   12434 sec   (402 perm/sec)   p_kst 2.000000e-07   p_cons 9.999992e-01   p_joint 1.200000e-05

Outputting figure to mutsig2_images.part000000000200/ZNF878.4_1757_5000000_2e-07_1_1.2e-05.png
                gene_name: ZNF878
               theta_stop: 2.8 
                    nperm: 5000000 
                     p_ks: 2.00e-07 
        ci_ks_bounds_left: 5.06e-09 
       ci_ks_bounds_right: 1.11e-06 
                   p_cons: 1.00 
      ci_cons_bounds_left: 1.00 
     ci_cons_bounds_right: 1.00 
                  p_joint: 1.20e-05 
     ci_joint_bounds_left: 9.16e-06 
    ci_joint_bounds_right: 1.54e-05 

Current progress: 25 percent done.
ZNF99
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 5.264337e-02	ci left: 3.472048e-01	ci right 3.660788e-01	k: 3566	n:10000
Cons ci ratio: 1.389693e-02	ci left: 8.820651e-01	ci right 8.945077e-01	k: 8884	n:10000
KS ci ratio: 9.302001e-02	ci left: 1.437406e-01	ci right 1.578635e-01	k: 1507	n:10000
ZNF99   10000 perm   3 sec   (3201 perm/sec)   p_kst 1.507000e-01   p_cons 8.884000e-01   p_joint 3.566000e-01

Outputting figure to mutsig2_images.part000000000200/ZNF99.3_3141_10000_0.1507_0.8884_0.3566.png
                gene_name: ZNF99
               theta_stop: 0.093 
                    nperm: 10000 
                     p_ks: 0.15 
        ci_ks_bounds_left: 0.14 
       ci_ks_bounds_right: 0.16 
                   p_cons: 0.89 
      ci_cons_bounds_left: 0.88 
     ci_cons_bounds_right: 0.89 
                  p_joint: 0.36 
     ci_joint_bounds_left: 0.35 
    ci_joint_bounds_right: 0.37 

Current progress: 38 percent done.
ZZEF1
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.739707e-02	ci left: 6.624978e-01	ci right 6.810020e-01	k: 6718	n:10000
KS ci ratio: 2.005282e-02	ci left: 7.845188e-01	ci right 8.005105e-01	k: 7926	n:10000
ZZEF1   10000 perm   4 sec   (2260 perm/sec)   p_kst 7.926000e-01   p_cons 6.718000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000200/ZZEF1.3_9106_10000_0.7926_0.6718_1.png
                gene_name: ZZEF1
               theta_stop: 0.027 
                    nperm: 10000 
                     p_ks: 0.79 
        ci_ks_bounds_left: 0.78 
       ci_ks_bounds_right: 0.80 
                   p_cons: 0.67 
      ci_cons_bounds_left: 0.66 
     ci_cons_bounds_right: 0.68 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 50 percent done.
ZNF804A
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 2.225767e-02	ci left: 7.476605e-01	ci right 7.645900e-01	k: 7562	n:10000
Cons ci ratio: 2.797670e-02	ci left: 6.531359e-01	ci right 6.717694e-01	k: 6625	n:10000
KS ci ratio: 6.973651e-02	ci left: 2.316560e-01	ci right 2.484957e-01	k: 2400	n:10000
ZNF804A   10000 perm   3 sec   (3211 perm/sec)   p_kst 2.400000e-01   p_cons 6.625000e-01   p_joint 7.562000e-01

Outputting figure to mutsig2_images.part000000000200/ZNF804A.2_3646_10000_0.24_0.6625_0.7562.png
                gene_name: ZNF804A
               theta_stop: 0.070 
                    nperm: 10000 
                     p_ks: 0.24 
        ci_ks_bounds_left: 0.23 
       ci_ks_bounds_right: 0.25 
                   p_cons: 0.66 
      ci_cons_bounds_left: 0.65 
     ci_cons_bounds_right: 0.67 
                  p_joint: 0.76 
     ci_joint_bounds_left: 0.75 
    ci_joint_bounds_right: 0.76 

Current progress: 62 percent done.
ZNF844
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 4.449803e-01	ci left: 5.992474e-03	ci right 9.503426e-03	k: 76	n:10000
Cons ci ratio: 7.595156e-03	ci left: 9.600562e-01	ci right 9.674704e-01	k: 9639	n:10000
KS ci ratio: 1.481028e+00	ci left: 2.202202e-04	ci right 1.305486e-03	k: 6	n:10000
ZNF844   10000 perm   3 sec   (3627 perm/sec)   p_kst 6.000000e-04   p_cons 9.639000e-01   p_joint 7.600000e-03

Joint ci ratio: 2.697250e-01	ci left: 9.040547e-03	ci right 1.190446e-02	k: 208	n:20000
Cons ci ratio: 5.657314e-03	ci left: 9.572431e-01	ci right 9.627221e-01	k: 19201	n:20000
KS ci ratio: 9.795835e-01	ci left: 4.198281e-04	ci right 1.236710e-03	k: 15	n:20000
ZNF844   20000 perm   6 sec   (3253 perm/sec)   p_kst 7.500000e-04   p_cons 9.600500e-01   p_joint 1.040000e-02

Joint ci ratio: 1.617551e-01	ci left: 1.764517e-02	ci right 2.078225e-02	k: 575	n:30000
Cons ci ratio: 4.404628e-03	ci left: 9.613502e-01	ci right 9.656261e-01	k: 28906	n:30000
KS ci ratio: 7.153210e-01	ci left: 6.474844e-04	ci right 1.388002e-03	k: 29	n:30000
ZNF844   30000 perm   10 sec   (3106 perm/sec)   p_kst 9.666667e-04   p_cons 9.635333e-01   p_joint 1.916667e-02

Joint ci ratio: 1.625812e-01	ci left: 1.315938e-02	ci right 1.551190e-02	k: 572	n:40000
Cons ci ratio: 3.832192e-03	ci left: 9.613085e-01	ci right 9.650238e-01	k: 38528	n:40000
KS ci ratio: 6.719803e-01	ci left: 5.679580e-04	ci right 1.158413e-03	k: 33	n:40000
ZNF844   40000 perm   13 sec   (2997 perm/sec)   p_kst 8.250000e-04   p_cons 9.632000e-01   p_joint 1.430000e-02

Joint ci ratio: 1.442219e-01	ci left: 1.350904e-02	ci right 1.562787e-02	k: 727	n:50000
Cons ci ratio: 3.413866e-03	ci left: 9.617987e-01	ci right 9.651072e-01	k: 48174	n:50000
KS ci ratio: 6.119440e-01	ci left: 5.715913e-04	ci right 1.089215e-03	k: 40	n:50000
ZNF844   50000 perm   17 sec   (2918 perm/sec)   p_kst 8.000000e-04   p_cons 9.634800e-01   p_joint 1.454000e-02

Joint ci ratio: 1.576451e-01	ci left: 9.395429e-03	ci right 1.101914e-02	k: 611	n:60000
Cons ci ratio: 3.112460e-03	ci left: 9.620365e-01	ci right 9.650518e-01	k: 57814	n:60000
KS ci ratio: 5.655722e-01	ci left: 5.756189e-04	ci right 1.041533e-03	k: 47	n:60000
ZNF844   60000 perm   21 sec   (2904 perm/sec)   p_kst 7.833333e-04   p_cons 9.635667e-01   p_joint 1.018333e-02

Joint ci ratio: 1.058544e-01	ci left: 1.819625e-02	ci right 2.024388e-02	k: 1344	n:70000
Cons ci ratio: 2.870736e-03	ci left: 9.624189e-01	ci right 9.651997e-01	k: 67468	n:70000
KS ci ratio: 5.332348e-01	ci left: 5.672018e-04	ci right 9.902460e-04	k: 53	n:70000
ZNF844   70000 perm   23 sec   (3016 perm/sec)   p_kst 7.571429e-04   p_cons 9.638286e-01   p_joint 1.920000e-02

Joint ci ratio: 1.160988e-01	ci left: 1.323368e-02	ci right 1.487684e-02	k: 1123	n:80000
Cons ci ratio: 2.684446e-03	ci left: 9.625333e-01	ci right 9.651329e-01	k: 77108	n:80000
KS ci ratio: 5.101491e-01	ci left: 5.505675e-04	ci right 9.371312e-04	k: 58	n:80000
ZNF844   80000 perm   26 sec   (3105 perm/sec)   p_kst 7.250000e-04   p_cons 9.638500e-01   p_joint 1.403750e-02

Joint ci ratio: 1.094371e-01	ci left: 1.328579e-02	ci right 1.483465e-02	k: 1264	n:90000
Cons ci ratio: 2.521383e-03	ci left: 9.628752e-01	ci right 9.653170e-01	k: 86770	n:90000
KS ci ratio: 4.860379e-01	ci left: 5.476839e-04	ci right 9.079836e-04	k: 64	n:90000
ZNF844   90000 perm   28 sec   (3160 perm/sec)   p_kst 7.111111e-04   p_cons 9.641111e-01   p_joint 1.404444e-02

Joint ci ratio: 9.312596e-02	ci left: 1.659860e-02	ci right 1.822957e-02	k: 1740	n:100000
Cons ci ratio: 2.385773e-03	ci left: 9.631213e-01	ci right 9.654316e-01	k: 96429	n:100000
KS ci ratio: 4.586315e-01	ci left: 5.633970e-04	ci right 9.066362e-04	k: 72	n:100000
ZNF844   100000 perm   32 sec   (3144 perm/sec)   p_kst 7.200000e-04   p_cons 9.642900e-01   p_joint 1.740000e-02

Joint ci ratio: 9.831823e-02	ci left: 1.354458e-02	ci right 1.495393e-02	k: 1566	n:110000
Cons ci ratio: 2.276791e-03	ci left: 9.631129e-01	ci right 9.653171e-01	k: 106065	n:110000
KS ci ratio: 4.494974e-01	ci left: 5.363298e-04	ci right 8.545911e-04	k: 75	n:110000
ZNF844   110000 perm   36 sec   (3050 perm/sec)   p_kst 6.818182e-04   p_cons 9.642273e-01   p_joint 1.423636e-02

Joint ci ratio: 1.174337e-01	ci left: 8.659442e-03	ci right 9.747808e-03	k: 1103	n:120000
Cons ci ratio: 2.174643e-03	ci left: 9.633277e-01	ci right 9.654331e-01	k: 115727	n:120000
KS ci ratio: 4.275556e-01	ci left: 5.509451e-04	ci right 8.573538e-04	k: 83	n:120000
ZNF844   120000 perm   39 sec   (3061 perm/sec)   p_kst 6.916667e-04   p_cons 9.643917e-01   p_joint 9.191667e-03

Joint ci ratio: 8.585011e-02	ci left: 1.510651e-02	ci right 1.646906e-02	k: 2051	n:130000
Cons ci ratio: 2.079683e-03	ci left: 9.636904e-01	ci right 9.657042e-01	k: 125412	n:130000
KS ci ratio: 4.177303e-01	ci left: 5.360601e-04	ci right 8.254292e-04	k: 87	n:130000
ZNF844   130000 perm   42 sec   (3070 perm/sec)   p_kst 6.692308e-04   p_cons 9.647077e-01   p_joint 1.577692e-02

Joint ci ratio: 1.021251e-01	ci left: 9.882139e-03	ci right 1.095257e-02	k: 1457	n:140000
Cons ci ratio: 2.129331e-03	ci left: 9.593002e-01	ci right 9.613521e-01	k: 134447	n:140000
KS ci ratio: 3.958398e-01	ci left: 5.618953e-04	ci right 8.451626e-04	k: 97	n:140000
ZNF844   140000 perm   46 sec   (3069 perm/sec)   p_kst 6.928571e-04   p_cons 9.603357e-01   p_joint 1.040714e-02

Joint ci ratio: 8.250373e-02	ci left: 1.421458e-02	ci right 1.544428e-02	k: 2223	n:150000
Cons ci ratio: 2.055202e-03	ci left: 9.594076e-01	ci right 9.613879e-01	k: 144061	n:150000
KS ci ratio: 3.842531e-01	ci left: 5.605131e-04	ci right 8.327222e-04	k: 103	n:150000
ZNF844   150000 perm   49 sec   (3058 perm/sec)   p_kst 6.866667e-04   p_cons 9.604067e-01   p_joint 1.482000e-02

Joint ci ratio: 7.995693e-02	ci left: 1.420788e-02	ci right 1.539730e-02	k: 2367	n:160000
Cons ci ratio: 1.992721e-03	ci left: 9.593318e-01	ci right 9.612515e-01	k: 153648	n:160000
KS ci ratio: 3.702744e-01	ci left: 5.707416e-04	ci right 8.353948e-04	k: 111	n:160000
ZNF844   160000 perm   52 sec   (3060 perm/sec)   p_kst 6.937500e-04   p_cons 9.603000e-01   p_joint 1.479375e-02

Joint ci ratio: 7.846068e-02	ci left: 1.390249e-02	ci right 1.504357e-02	k: 2459	n:170000
Cons ci ratio: 1.933216e-03	ci left: 9.593610e-01	ci right 9.612232e-01	k: 163251	n:170000
KS ci ratio: 3.622783e-01	ci left: 5.638732e-04	ci right 8.183617e-04	k: 116	n:170000
ZNF844   170000 perm   57 sec   (2996 perm/sec)   p_kst 6.823529e-04   p_cons 9.603000e-01   p_joint 1.446471e-02

Joint ci ratio: 9.632563e-02	ci left: 8.677308e-03	ci right 9.560832e-03	k: 1640	n:180000
Cons ci ratio: 1.879426e-03	ci left: 9.593597e-01	ci right 9.611699e-01	k: 172849	n:180000
KS ci ratio: 3.504927e-01	ci left: 5.730138e-04	ci right 8.213029e-04	k: 124	n:180000
ZNF844   180000 perm   62 sec   (2911 perm/sec)   p_kst 6.888889e-04   p_cons 9.602722e-01   p_joint 9.111111e-03

Joint ci ratio: 6.782107e-02	ci left: 1.669258e-02	ci right 1.786958e-02	k: 3282	n:190000
Cons ci ratio: 1.827744e-03	ci left: 9.594496e-01	ci right 9.612100e-01	k: 182464	n:190000
KS ci ratio: 3.410728e-01	ci left: 5.764985e-04	ci right 8.181051e-04	k: 131	n:190000
ZNF844   190000 perm   67 sec   (2829 perm/sec)   p_kst 6.894737e-04   p_cons 9.603368e-01   p_joint 1.727368e-02

Joint ci ratio: 7.555582e-02	ci left: 1.277797e-02	ci right 1.378621e-02	k: 2655	n:200000
Cons ci ratio: 1.783606e-03	ci left: 9.593795e-01	ci right 9.610971e-01	k: 192049	n:200000
KS ci ratio: 3.360221e-01	ci left: 5.659730e-04	ci right 7.988947e-04	k: 135	n:200000
ZNF844   200000 perm   73 sec   (2736 perm/sec)   p_kst 6.750000e-04   p_cons 9.602450e-01   p_joint 1.327500e-02

Joint ci ratio: 7.366537e-02	ci left: 1.281439e-02	ci right 1.379911e-02	k: 2793	n:210000
Cons ci ratio: 1.737624e-03	ci left: 9.595331e-01	ci right 9.612065e-01	k: 201679	n:210000
KS ci ratio: 3.311892e-01	ci left: 5.564737e-04	ci right 7.814902e-04	k: 139	n:210000
ZNF844   210000 perm   78 sec   (2708 perm/sec)   p_kst 6.619048e-04   p_cons 9.603762e-01   p_joint 1.330000e-02

Joint ci ratio: 7.157678e-02	ci left: 1.296833e-02	ci right 1.393546e-02	k: 2958	n:220000
Cons ci ratio: 1.697442e-03	ci left: 9.595630e-01	ci right 9.611976e-01	k: 211285	n:220000
KS ci ratio: 3.243131e-01	ci left: 5.562085e-04	ci right 7.754767e-04	k: 145	n:220000
ZNF844   220000 perm   83 sec   (2643 perm/sec)   p_kst 6.590909e-04   p_cons 9.603864e-01   p_joint 1.344545e-02

Joint ci ratio: 6.989478e-02	ci left: 1.301952e-02	ci right 1.396671e-02	k: 3102	n:230000
Cons ci ratio: 1.659830e-03	ci left: 9.595950e-01	ci right 9.611934e-01	k: 220892	n:230000
KS ci ratio: 3.107681e-01	ci left: 5.840463e-04	ci right 8.027679e-04	k: 158	n:230000
ZNF844   230000 perm   89 sec   (2578 perm/sec)   p_kst 6.869565e-04   p_cons 9.604000e-01   p_joint 1.348696e-02

Joint ci ratio: 6.840081e-02	ci left: 1.303800e-02	ci right 1.396547e-02	k: 3239	n:240000
Cons ci ratio: 1.624968e-03	ci left: 9.596079e-01	ci right 9.611726e-01	k: 230495	n:240000
KS ci ratio: 3.032325e-01	ci left: 5.904774e-04	ci right 8.052116e-04	k: 166	n:240000
ZNF844   240000 perm   95 sec   (2537 perm/sec)   p_kst 6.916667e-04   p_cons 9.603958e-01   p_joint 1.349583e-02

Joint ci ratio: 7.833989e-02	ci left: 9.527364e-03	ci right 1.030806e-02	k: 2478	n:250000
Cons ci ratio: 1.591629e-03	ci left: 9.596484e-01	ci right 9.611809e-01	k: 240105	n:250000
KS ci ratio: 2.970704e-01	ci left: 5.927503e-04	ci right 8.031051e-04	k: 173	n:250000
ZNF844   250000 perm   101 sec   (2471 perm/sec)   p_kst 6.920000e-04   p_cons 9.604200e-01   p_joint 9.912000e-03

Joint ci ratio: 5.851282e-02	ci left: 1.647246e-02	ci right 1.746912e-02	k: 4411	n:260000
Cons ci ratio: 1.561207e-03	ci left: 9.596394e-01	ci right 9.611426e-01	k: 249703	n:260000
KS ci ratio: 2.953805e-01	ci left: 5.770722e-04	ci right 7.804799e-04	k: 175	n:260000
ZNF844   260000 perm   108 sec   (2412 perm/sec)   p_kst 6.730769e-04   p_cons 9.603962e-01   p_joint 1.696538e-02

Joint ci ratio: 6.456077e-02	ci left: 1.303528e-02	ci right 1.390854e-02	k: 3636	n:270000
Cons ci ratio: 1.531794e-03	ci left: 9.596651e-01	ci right 9.611398e-01	k: 259310	n:270000
KS ci ratio: 2.904712e-01	ci left: 5.762887e-04	ci right 7.754237e-04	k: 181	n:270000
ZNF844   270000 perm   115 sec   (2342 perm/sec)   p_kst 6.703704e-04   p_cons 9.604074e-01   p_joint 1.346667e-02

Joint ci ratio: 7.447914e-02	ci left: 9.431409e-03	ci right 1.016451e-02	k: 2742	n:280000
Cons ci ratio: 1.502499e-03	ci left: 9.597648e-01	ci right 9.612114e-01	k: 268938	n:280000
KS ci ratio: 2.881084e-01	ci left: 5.656435e-04	ci right 7.592203e-04	k: 184	n:280000
ZNF844   280000 perm   122 sec   (2287 perm/sec)   p_kst 6.571429e-04   p_cons 9.604929e-01   p_joint 9.792857e-03

Joint ci ratio: 7.327451e-02	ci left: 9.414181e-03	ci right 1.013360e-02	k: 2833	n:290000
Cons ci ratio: 1.477701e-03	ci left: 9.597082e-01	ci right 9.611308e-01	k: 278523	n:290000
KS ci ratio: 2.813450e-01	ci left: 5.749577e-04	ci right 7.662842e-04	k: 193	n:290000
ZNF844   290000 perm   129 sec   (2241 perm/sec)   p_kst 6.655172e-04   p_cons 9.604241e-01   p_joint 9.768966e-03

Joint ci ratio: 7.215141e-02	ci left: 9.391643e-03	ci right 1.009788e-02	k: 2922	n:300000
Cons ci ratio: 1.452241e-03	ci left: 9.597532e-01	ci right 9.611513e-01	k: 288137	n:300000
KS ci ratio: 2.791963e-01	ci left: 5.650893e-04	ci right 7.514430e-04	k: 196	n:300000
ZNF844   300000 perm   134 sec   (2235 perm/sec)   p_kst 6.533333e-04   p_cons 9.604567e-01   p_joint 9.740000e-03

Joint ci ratio: 7.562130e-02	ci left: 8.268448e-03	ci right 8.921433e-03	k: 2663	n:310000
Cons ci ratio: 1.429932e-03	ci left: 9.596946e-01	ci right 9.610710e-01	k: 297720	n:310000
KS ci ratio: 2.750395e-01	ci left: 5.648706e-04	ci right 7.478993e-04	k: 202	n:310000
ZNF844   310000 perm   141 sec   (2197 perm/sec)   p_kst 6.516129e-04   p_cons 9.603871e-01   p_joint 8.590323e-03

Joint ci ratio: 7.451150e-02	ci left: 8.255364e-03	ci right 8.897333e-03	k: 2743	n:320000
Cons ci ratio: 1.407980e-03	ci left: 9.596745e-01	ci right 9.610297e-01	k: 307314	n:320000
KS ci ratio: 2.730310e-01	ci left: 5.559489e-04	ci right 7.345456e-04	k: 205	n:320000
ZNF844   320000 perm   147 sec   (2183 perm/sec)   p_kst 6.406250e-04   p_cons 9.603563e-01   p_joint 8.571875e-03

Joint ci ratio: 7.320119e-02	ci left: 8.299668e-03	ci right 8.933249e-03	k: 2842	n:330000
Cons ci ratio: 1.388057e-03	ci left: 9.595977e-01	ci right 9.609336e-01	k: 316889	n:330000
KS ci ratio: 2.697772e-01	ci left: 5.532225e-04	ci right 7.284668e-04	k: 210	n:330000
ZNF844   330000 perm   153 sec   (2151 perm/sec)   p_kst 6.363636e-04   p_cons 9.602697e-01   p_joint 8.612121e-03

Joint ci ratio: 7.216827e-02	ci left: 8.292351e-03	ci right 8.916067e-03	k: 2924	n:340000
Cons ci ratio: 1.367475e-03	ci left: 9.596086e-01	ci right 9.609247e-01	k: 326492	n:340000
KS ci ratio: 2.672568e-01	ci left: 5.479238e-04	ci right 7.195965e-04	k: 214	n:340000
ZNF844   340000 perm   160 sec   (2123 perm/sec)   p_kst 6.294118e-04   p_cons 9.602706e-01   p_joint 8.600000e-03

Joint ci ratio: 8.843160e-02	ci left: 5.335889e-03	ci right 5.832351e-03	k: 1953	n:350000
Cons ci ratio: 1.347832e-03	ci left: 9.596162e-01	ci right 9.609133e-01	k: 336094	n:350000
KS ci ratio: 2.642029e-01	ci left: 5.456029e-04	ci right 7.142719e-04	k: 219	n:350000
ZNF844   350000 perm   167 sec   (2092 perm/sec)   p_kst 6.257143e-04   p_cons 9.602686e-01   p_joint 5.580000e-03

Joint ci ratio: 8.699535e-02	ci left: 5.364268e-03	ci right 5.854853e-03	k: 2018	n:360000
Cons ci ratio: 1.329448e-03	ci left: 9.595983e-01	ci right 9.608776e-01	k: 345687	n:360000
KS ci ratio: 2.606723e-01	ci left: 5.460176e-04	ci right 7.121916e-04	k: 225	n:360000
ZNF844   360000 perm   175 sec   (2061 perm/sec)   p_kst 6.250000e-04   p_cons 9.602417e-01   p_joint 5.605556e-03

Joint ci ratio: 8.600118e-02	ci left: 5.343564e-03	ci right 5.826391e-03	k: 2065	n:370000
Cons ci ratio: 1.310774e-03	ci left: 9.596414e-01	ci right 9.609027e-01	k: 355302	n:370000
KS ci ratio: 2.572796e-01	ci left: 5.464240e-04	ci right 7.102097e-04	k: 231	n:370000
ZNF844   370000 perm   181 sec   (2046 perm/sec)   p_kst 6.243243e-04   p_cons 9.602757e-01   p_joint 5.581081e-03

Joint ci ratio: 6.803506e-02	ci left: 8.365770e-03	ci right 8.957549e-03	k: 3290	n:380000
Cons ci ratio: 1.293177e-03	ci left: 9.596638e-01	ci right 9.609082e-01	k: 364910	n:380000
KS ci ratio: 2.556332e-01	ci left: 5.394315e-04	ci right 6.999214e-04	k: 234	n:380000
ZNF844   380000 perm   187 sec   (2031 perm/sec)   p_kst 6.157895e-04   p_cons 9.602895e-01   p_joint 8.657895e-03

Joint ci ratio: 7.070184e-02	ci left: 7.543916e-03	ci right 8.099332e-03	k: 3049	n:390000
Cons ci ratio: 1.276828e-03	ci left: 9.596515e-01	ci right 9.608801e-01	k: 374505	n:390000
KS ci ratio: 2.503606e-01	ci left: 5.496157e-04	ci right 7.092375e-04	k: 244	n:390000
ZNF844   390000 perm   194 sec   (2010 perm/sec)   p_kst 6.256410e-04   p_cons 9.602692e-01   p_joint 7.817949e-03

Joint ci ratio: 6.974739e-02	ci left: 7.561632e-03	ci right 8.110533e-03	k: 3133	n:400000
Cons ci ratio: 1.261166e-03	ci left: 9.596349e-01	ci right 9.608484e-01	k: 384098	n:400000
KS ci ratio: 2.458843e-01	ci left: 5.569767e-04	ci right 7.154023e-04	k: 253	n:400000
ZNF844   400000 perm   202 sec   (1981 perm/sec)   p_kst 6.325000e-04   p_cons 9.602450e-01   p_joint 7.832500e-03

Joint ci ratio: 6.540415e-02	ci left: 8.401199e-03	ci right 8.971631e-03	k: 3560	n:410000
Cons ci ratio: 1.245907e-03	ci left: 9.596291e-01	ci right 9.608278e-01	k: 393695	n:410000
KS ci ratio: 2.434997e-01	ci left: 5.548393e-04	ci right 7.108950e-04	k: 258	n:410000
ZNF844   410000 perm   211 sec   (1941 perm/sec)   p_kst 6.292683e-04   p_cons 9.602317e-01   p_joint 8.682927e-03

Joint ci ratio: 6.474498e-02	ci left: 8.372147e-03	ci right 8.934663e-03	k: 3633	n:420000
Cons ci ratio: 1.230076e-03	ci left: 9.596931e-01	ci right 9.608767e-01	k: 403321	n:420000
KS ci ratio: 2.416416e-01	ci left: 5.505736e-04	ci right 7.040707e-04	k: 262	n:420000
ZNF844   420000 perm   220 sec   (1907 perm/sec)   p_kst 6.238095e-04   p_cons 9.602881e-01   p_joint 8.650000e-03

Joint ci ratio: 6.385387e-02	ci left: 8.410847e-03	ci right 8.967897e-03	k: 3735	n:430000
Cons ci ratio: 1.216647e-03	ci left: 9.596395e-01	ci right 9.608101e-01	k: 412898	n:430000
KS ci ratio: 2.389316e-01	ci left: 5.508830e-04	ci right 7.024890e-04	k: 268	n:430000
ZNF844   430000 perm   229 sec   (1874 perm/sec)   p_kst 6.232558e-04   p_cons 9.602279e-01   p_joint 8.686047e-03

Joint ci ratio: 6.313979e-02	ci left: 8.409805e-03	ci right 8.960330e-03	k: 3820	n:440000
Cons ci ratio: 1.202000e-03	ci left: 9.596937e-01	ci right 9.608502e-01	k: 422521	n:440000
KS ci ratio: 2.367418e-01	ci left: 5.490494e-04	ci right 6.985629e-04	k: 273	n:440000
ZNF844   440000 perm   238 sec   (1846 perm/sec)   p_kst 6.204545e-04   p_cons 9.602750e-01   p_joint 8.681818e-03

Joint ci ratio: 5.985248e-02	ci left: 9.159518e-03	ci right 9.726825e-03	k: 4248	n:450000
Cons ci ratio: 1.188006e-03	ci left: 9.597366e-01	ci right 9.608797e-01	k: 432140	n:450000
KS ci ratio: 2.341917e-01	ci left: 5.493951e-04	ci right 6.971578e-04	k: 279	n:450000
ZNF844   450000 perm   248 sec   (1817 perm/sec)   p_kst 6.200000e-04   p_cons 9.603111e-01   p_joint 9.440000e-03

Joint ci ratio: 6.512271e-02	ci left: 7.560626e-03	ci right 8.071690e-03	k: 3594	n:460000
Cons ci ratio: 1.175293e-03	ci left: 9.597252e-01	ci right 9.608560e-01	k: 441735	n:460000
KS ci ratio: 2.321286e-01	ci left: 5.476863e-04	ci right 6.935056e-04	k: 284	n:460000
ZNF844   460000 perm   256 sec   (1798 perm/sec)   p_kst 6.173913e-04   p_cons 9.602935e-01   p_joint 7.813043e-03

Joint ci ratio: 6.442753e-02	ci left: 7.563031e-03	ci right 8.068597e-03	k: 3672	n:470000
Cons ci ratio: 1.163206e-03	ci left: 9.596993e-01	ci right 9.608184e-01	k: 451323	n:470000
KS ci ratio: 2.297231e-01	ci left: 5.480609e-04	ci right 6.922534e-04	k: 290	n:470000
ZNF844   470000 perm   265 sec   (1771 perm/sec)   p_kst 6.170213e-04   p_cons 9.602617e-01   p_joint 7.812766e-03

Joint ci ratio: 6.280756e-02	ci left: 7.797084e-03	ci right 8.304714e-03	k: 3863	n:480000
Cons ci ratio: 1.152050e-03	ci left: 9.596369e-01	ci right 9.607451e-01	k: 460893	n:480000
KS ci ratio: 2.281608e-01	ci left: 5.444983e-04	ci right 6.866420e-04	k: 294	n:480000
ZNF844   480000 perm   276 sec   (1742 perm/sec)   p_kst 6.125000e-04   p_cons 9.601937e-01   p_joint 8.047917e-03

Joint ci ratio: 6.703345e-02	ci left: 6.698217e-03	ci right 7.164785e-03	k: 3395	n:490000
Cons ci ratio: 1.139013e-03	ci left: 9.597249e-01	ci right 9.608207e-01	k: 470535	n:490000
KS ci ratio: 2.262518e-01	ci left: 5.430094e-04	ci right 6.834129e-04	k: 299	n:490000
ZNF844   490000 perm   286 sec   (1715 perm/sec)   p_kst 6.102041e-04   p_cons 9.602755e-01   p_joint 6.928571e-03

Joint ci ratio: 6.650780e-02	ci left: 6.670446e-03	ci right 7.131296e-03	k: 3449	n:500000
Cons ci ratio: 1.127262e-03	ci left: 9.597511e-01	ci right 9.608356e-01	k: 480148	n:500000
KS ci ratio: 2.240227e-01	ci left: 5.434725e-04	ci right 6.824202e-04	k: 305	n:500000
ZNF844   500000 perm   296 sec   (1689 perm/sec)   p_kst 6.100000e-04   p_cons 9.602960e-01   p_joint 6.898000e-03

Joint ci ratio: 6.581488e-02	ci left: 6.680423e-03	ci right 7.136970e-03	k: 3522	n:510000
Cons ci ratio: 1.115781e-03	ci left: 9.597822e-01	ci right 9.608557e-01	k: 489764	n:510000
KS ci ratio: 2.222148e-01	ci left: 5.420721e-04	ci right 6.793904e-04	k: 310	n:510000
ZNF844   510000 perm   304 sec   (1678 perm/sec)   p_kst 6.078431e-04   p_cons 9.603216e-01   p_joint 6.905882e-03

Joint ci ratio: 7.785220e-02	ci left: 4.662976e-03	ci right 5.042574e-03	k: 2522	n:520000
Cons ci ratio: 1.104197e-03	ci left: 9.598432e-01	ci right 9.609055e-01	k: 499396	n:520000
KS ci ratio: 2.204500e-01	ci left: 5.407300e-04	ci right 6.764729e-04	k: 315	n:520000
ZNF844   520000 perm   314 sec   (1655 perm/sec)   p_kst 6.057692e-04   p_cons 9.603769e-01   p_joint 4.850000e-03

Joint ci ratio: 7.709195e-02	ci left: 4.667507e-03	ci right 5.043597e-03	k: 2572	n:530000
Cons ci ratio: 1.093859e-03	ci left: 9.598392e-01	ci right 9.608916e-01	k: 508995	n:530000
KS ci ratio: 2.180480e-01	ci left: 5.430099e-04	ci right 6.776409e-04	k: 322	n:530000
ZNF844   530000 perm   325 sec   (1631 perm/sec)   p_kst 6.075472e-04   p_cons 9.603679e-01   p_joint 4.852830e-03

Joint ci ratio: 6.019342e-02	ci left: 7.557959e-03	ci right 8.028827e-03	k: 4207	n:540000
Cons ci ratio: 1.084254e-03	ci left: 9.598038e-01	ci right 9.608468e-01	k: 518577	n:540000
KS ci ratio: 2.150716e-01	ci left: 5.487171e-04	ci right 6.826609e-04	k: 331	n:540000
ZNF844   540000 perm   334 sec   (1617 perm/sec)   p_kst 6.129630e-04   p_cons 9.603278e-01   p_joint 7.790741e-03

Joint ci ratio: 5.964318e-02	ci left: 7.560235e-03	ci right 8.026790e-03	k: 4285	n:550000
Cons ci ratio: 1.074513e-03	ci left: 9.597971e-01	ci right 9.608308e-01	k: 528174	n:550000
KS ci ratio: 2.131542e-01	ci left: 5.490645e-04	ci right 6.817421e-04	k: 337	n:550000
ZNF844   550000 perm   342 sec   (1607 perm/sec)   p_kst 6.127273e-04   p_cons 9.603164e-01   p_joint 7.790909e-03

Joint ci ratio: 6.293424e-02	ci left: 6.663759e-03	ci right 7.098509e-03	k: 3852	n:560000
Cons ci ratio: 1.065528e-03	ci left: 9.597548e-01	ci right 9.607797e-01	k: 537751	n:560000
KS ci ratio: 2.122151e-01	ci left: 5.443315e-04	ci right 6.752104e-04	k: 340	n:560000
ZNF844   560000 perm   353 sec   (1587 perm/sec)   p_kst 6.071429e-04   p_cons 9.602696e-01   p_joint 6.878571e-03

Joint ci ratio: 6.243429e-02	ci left: 6.653917e-03	ci right 7.084451e-03	k: 3914	n:570000
Cons ci ratio: 1.056375e-03	ci left: 9.597422e-01	ci right 9.607583e-01	k: 547344	n:570000
KS ci ratio: 2.106763e-01	ci left: 5.430892e-04	ci right 6.726004e-04	k: 345	n:570000
ZNF844   570000 perm   364 sec   (1566 perm/sec)   p_kst 6.052632e-04   p_cons 9.602526e-01   p_joint 6.866667e-03

Joint ci ratio: 6.436991e-02	ci left: 6.148877e-03	ci right 6.559526e-03	k: 3684	n:580000
Cons ci ratio: 1.046910e-03	ci left: 9.597701e-01	ci right 9.607771e-01	k: 556960	n:580000
KS ci ratio: 2.091706e-01	ci left: 5.418931e-04	ci right 6.700771e-04	k: 350	n:580000
ZNF844   580000 perm   375 sec   (1546 perm/sec)   p_kst 6.034483e-04   p_cons 9.602759e-01   p_joint 6.351724e-03

Joint ci ratio: 6.376675e-02	ci left: 6.161403e-03	ci right 6.568891e-03	k: 3754	n:590000
Cons ci ratio: 1.037855e-03	ci left: 9.597850e-01	ci right 9.607833e-01	k: 566569	n:590000
KS ci ratio: 2.065389e-01	ci left: 5.471689e-04	ci right 6.747668e-04	k: 359	n:590000
ZNF844   590000 perm   387 sec   (1525 perm/sec)   p_kst 6.084746e-04   p_cons 9.602864e-01   p_joint 6.362712e-03

Joint ci ratio: 6.318855e-02	ci left: 6.171888e-03	ci right 6.576233e-03	k: 3823	n:600000
Cons ci ratio: 1.029009e-03	ci left: 9.598012e-01	ci right 9.607910e-01	k: 576179	n:600000
KS ci ratio: 2.045596e-01	ci left: 5.491157e-04	ci right 6.757869e-04	k: 366	n:600000
ZNF844   600000 perm   398 sec   (1509 perm/sec)   p_kst 6.100000e-04   p_cons 9.602983e-01   p_joint 6.371667e-03

Joint ci ratio: 6.263389e-02	ci left: 6.180433e-03	ci right 6.581654e-03	k: 3891	n:610000
Cons ci ratio: 1.020079e-03	ci left: 9.598400e-01	ci right 9.608212e-01	k: 585803	n:610000
KS ci ratio: 2.026361e-01	ci left: 5.510042e-04	ci right 6.767680e-04	k: 373	n:610000
ZNF844   610000 perm   406 sec   (1502 perm/sec)   p_kst 6.114754e-04   p_cons 9.603328e-01   p_joint 6.378689e-03

Joint ci ratio: 6.206205e-02	ci left: 6.195068e-03	ci right 6.593436e-03	k: 3963	n:620000
Cons ci ratio: 1.012082e-03	ci left: 9.598240e-01	ci right 9.607975e-01	k: 595394	n:620000
KS ci ratio: 2.012952e-01	ci left: 5.497737e-04	ci right 6.743243e-04	k: 378	n:620000
ZNF844   620000 perm   413 sec   (1500 perm/sec)   p_kst 6.096774e-04   p_cons 9.603129e-01   p_joint 6.391935e-03

Joint ci ratio: 6.159782e-02	ci left: 6.190499e-03	ci right 6.585489e-03	k: 4023	n:630000
Cons ci ratio: 1.004188e-03	ci left: 9.598149e-01	ci right 9.607808e-01	k: 604989	n:630000
KS ci ratio: 1.994615e-01	ci left: 5.516008e-04	ci right 6.752885e-04	k: 385	n:630000
ZNF844   630000 perm   420 sec   (1500 perm/sec)   p_kst 6.111111e-04   p_cons 9.603000e-01   p_joint 6.385714e-03

Joint ci ratio: 6.115138e-02	ci left: 6.184545e-03	ci right 6.576194e-03	k: 4082	n:640000
Cons ci ratio: 9.965358e-04	ci left: 9.598015e-01	ci right 9.607600e-01	k: 614581	n:640000
KS ci ratio: 1.974258e-01	ci left: 5.548611e-04	ci right 6.778573e-04	k: 393	n:640000
ZNF844   640000 perm   427 sec   (1498 perm/sec)   p_kst 6.140625e-04   p_cons 9.602828e-01   p_joint 6.378125e-03

Joint ci ratio: 6.076621e-02	ci left: 6.168177e-03	ci right 6.556243e-03	k: 4134	n:650000
Cons ci ratio: 9.892954e-04	ci left: 9.597699e-01	ci right 9.607214e-01	k: 624161	n:650000
KS ci ratio: 1.964315e-01	ci left: 5.521751e-04	ci right 6.738857e-04	k: 397	n:650000
ZNF844   650000 perm   435 sec   (1495 perm/sec)   p_kst 6.107692e-04   p_cons 9.602477e-01   p_joint 6.360000e-03

Joint ci ratio: 6.037372e-02	ci left: 6.155297e-03	ci right 6.539964e-03	k: 4188	n:660000
Cons ci ratio: 9.814889e-04	ci left: 9.597957e-01	ci right 9.607397e-01	k: 633778	n:660000
KS ci ratio: 1.954521e-01	ci left: 5.495721e-04	ci right 6.700330e-04	k: 401	n:660000
ZNF844   660000 perm   445 sec   (1484 perm/sec)   p_kst 6.075758e-04   p_cons 9.602697e-01   p_joint 6.345455e-03

Joint ci ratio: 5.998873e-02	ci left: 6.142810e-03	ci right 6.524164e-03	k: 4242	n:670000
Cons ci ratio: 9.738640e-04	ci left: 9.598207e-01	ci right 9.607574e-01	k: 643395	n:670000
KS ci ratio: 1.947273e-01	ci left: 5.456283e-04	ci right 6.647287e-04	k: 404	n:670000
ZNF844   670000 perm   458 sec   (1464 perm/sec)   p_kst 6.029851e-04   p_cons 9.602910e-01   p_joint 6.331343e-03

Joint ci ratio: 5.957615e-02	ci left: 6.137942e-03	ci right 6.516282e-03	k: 4301	n:680000
Cons ci ratio: 9.668985e-04	ci left: 9.598066e-01	ci right 9.607365e-01	k: 652986	n:680000
KS ci ratio: 1.933008e-01	ci left: 5.459993e-04	ci right 6.642048e-04	k: 410	n:680000
ZNF844   680000 perm   470 sec   (1446 perm/sec)   p_kst 6.029412e-04   p_cons 9.602735e-01   p_joint 6.325000e-03

Joint ci ratio: 5.915148e-02	ci left: 6.137507e-03	ci right 6.513032e-03	k: 4363	n:690000
Cons ci ratio: 9.605904e-04	ci left: 9.597521e-01	ci right 9.606759e-01	k: 662549	n:690000
KS ci ratio: 1.921357e-01	ci left: 5.449830e-04	ci right 6.621743e-04	k: 415	n:690000
ZNF844   690000 perm   482 sec   (1432 perm/sec)   p_kst 6.014493e-04   p_cons 9.602159e-01   p_joint 6.323188e-03

Joint ci ratio: 5.874245e-02	ci left: 6.135687e-03	ci right 6.508416e-03	k: 4424	n:700000
Cons ci ratio: 9.534752e-04	ci left: 9.597739e-01	ci right 9.606909e-01	k: 672164	n:700000
KS ci ratio: 1.909915e-01	ci left: 5.439978e-04	ci right 6.601997e-04	k: 420	n:700000
ZNF844   700000 perm   490 sec   (1429 perm/sec)   p_kst 6.000000e-04   p_cons 9.602343e-01   p_joint 6.320000e-03

Joint ci ratio: 5.836144e-02	ci left: 6.129762e-03	ci right 6.499635e-03	k: 4482	n:710000
Cons ci ratio: 9.469171e-04	ci left: 9.597625e-01	ci right 9.606732e-01	k: 681756	n:710000
KS ci ratio: 1.894231e-01	ci left: 5.457256e-04	ci right 6.612291e-04	k: 427	n:710000
ZNF844   710000 perm   497 sec   (1427 perm/sec)   p_kst 6.014085e-04   p_cons 9.602197e-01   p_joint 6.312676e-03

Joint ci ratio: 5.796205e-02	ci left: 6.129486e-03	ci right 6.496726e-03	k: 4544	n:720000
Cons ci ratio: 9.402873e-04	ci left: 9.597682e-01	ci right 9.606725e-01	k: 691360	n:720000
KS ci ratio: 1.878927e-01	ci left: 5.474092e-04	ci right 6.622262e-04	k: 434	n:720000
ZNF844   720000 perm   506 sec   (1423 perm/sec)   p_kst 6.027778e-04   p_cons 9.602222e-01   p_joint 6.311111e-03

Joint ci ratio: 5.754562e-02	ci left: 6.134626e-03	ci right 6.499445e-03	k: 4610	n:730000
Cons ci ratio: 9.338115e-04	ci left: 9.597725e-01	ci right 9.606705e-01	k: 700963	n:730000
KS ci ratio: 1.857690e-01	ci left: 5.529685e-04	ci right 6.674930e-04	k: 444	n:730000
ZNF844   730000 perm   514 sec   (1420 perm/sec)   p_kst 6.082192e-04   p_cons 9.602233e-01   p_joint 6.315068e-03

Joint ci ratio: 5.711346e-02	ci left: 6.144965e-03	ci right 6.507565e-03	k: 4680	n:740000
Cons ci ratio: 9.276482e-04	ci left: 9.597616e-01	ci right 9.606537e-01	k: 710555	n:740000
KS ci ratio: 1.845292e-01	ci left: 5.532283e-04	ci right 6.669563e-04	k: 450	n:740000
ZNF844   740000 perm   522 sec   (1418 perm/sec)   p_kst 6.081081e-04   p_cons 9.602095e-01   p_joint 6.324324e-03

Joint ci ratio: 5.668489e-02	ci left: 6.156353e-03	ci right 6.516809e-03	k: 4751	n:750000
Cons ci ratio: 9.215731e-04	ci left: 9.597538e-01	ci right 9.606400e-01	k: 720149	n:750000
KS ci ratio: 1.831135e-01	ci left: 5.547558e-04	ci right 6.678258e-04	k: 457	n:750000
ZNF844   750000 perm   530 sec   (1416 perm/sec)   p_kst 6.093333e-04   p_cons 9.601987e-01   p_joint 6.334667e-03

Joint ci ratio: 5.630109e-02	ci left: 6.159667e-03	ci right 6.517796e-03	k: 4816	n:760000
Cons ci ratio: 9.161041e-04	ci left: 9.597052e-01	ci right 9.605861e-01	k: 729712	n:760000
KS ci ratio: 1.819258e-01	ci left: 5.549905e-04	ci right 6.672937e-04	k: 463	n:760000
ZNF844   760000 perm   539 sec   (1411 perm/sec)   p_kst 6.092105e-04   p_cons 9.601474e-01   p_joint 6.336842e-03

Joint ci ratio: 5.585018e-02	ci left: 6.179551e-03	ci right 6.535866e-03	k: 4894	n:770000
Cons ci ratio: 9.097724e-04	ci left: 9.597388e-01	ci right 9.606136e-01	k: 739337	n:770000
KS ci ratio: 1.799960e-01	ci left: 5.601817e-04	ci right 6.722020e-04	k: 473	n:770000
ZNF844   770000 perm   548 sec   (1405 perm/sec)   p_kst 6.142857e-04   p_cons 9.601779e-01   p_joint 6.355844e-03

Joint ci ratio: 5.549987e-02	ci left: 6.178707e-03	ci right 6.532667e-03	k: 4956	n:780000
Cons ci ratio: 9.042212e-04	ci left: 9.597161e-01	ci right 9.605856e-01	k: 748919	n:780000
KS ci ratio: 1.790543e-01	ci left: 5.591221e-04	ci right 6.702821e-04	k: 478	n:780000
ZNF844   780000 perm   561 sec   (1389 perm/sec)   p_kst 6.128205e-04   p_cons 9.601526e-01   p_joint 6.353846e-03

Joint ci ratio: 5.520589e-02	ci left: 6.166654e-03	ci right 6.517993e-03	k: 5009	n:790000
Cons ci ratio: 8.981310e-04	ci left: 9.597488e-01	ci right 9.606124e-01	k: 758544	n:790000
KS ci ratio: 1.781271e-01	ci left: 5.580907e-04	ci right 6.684093e-04	k: 483	n:790000
ZNF844   790000 perm   572 sec   (1382 perm/sec)   p_kst 6.113924e-04   p_cons 9.601823e-01   p_joint 6.340506e-03

Joint ci ratio: 5.493839e-02	ci left: 6.149976e-03	ci right 6.498613e-03	k: 5058	n:800000
Cons ci ratio: 8.929349e-04	ci left: 9.597140e-01	ci right 9.605726e-01	k: 768116	n:800000
KS ci ratio: 1.777607e-01	ci left: 5.535031e-04	ci right 6.626656e-04	k: 485	n:800000
ZNF844   800000 perm   581 sec   (1376 perm/sec)   p_kst 6.062500e-04   p_cons 9.601450e-01   p_joint 6.322500e-03

Joint ci ratio: 5.466935e-02	ci left: 6.134932e-03	ci right 6.480959e-03	k: 5108	n:810000
Cons ci ratio: 8.872833e-04	ci left: 9.597273e-01	ci right 9.605805e-01	k: 777726	n:810000
KS ci ratio: 1.768534e-01	ci left: 5.525686e-04	ci right 6.609311e-04	k: 490	n:810000
ZNF844   810000 perm   595 sec   (1361 perm/sec)   p_kst 6.049383e-04   p_cons 9.601556e-01   p_joint 6.306173e-03

Joint ci ratio: 5.440422e-02	ci left: 6.120258e-03	ci right 6.463731e-03	k: 5158	n:820000
Cons ci ratio: 8.819062e-04	ci left: 9.597256e-01	ci right 9.605736e-01	k: 787324	n:820000
KS ci ratio: 1.759598e-01	ci left: 5.516583e-04	ci right 6.592375e-04	k: 495	n:820000
ZNF844   820000 perm   606 sec   (1353 perm/sec)   p_kst 6.036585e-04   p_cons 9.601512e-01   p_joint 6.290244e-03

Joint ci ratio: 5.409068e-02	ci left: 6.117829e-03	ci right 6.459125e-03	k: 5218	n:830000
Cons ci ratio: 8.765430e-04	ci left: 9.597312e-01	ci right 9.605740e-01	k: 796928	n:830000
KS ci ratio: 1.752548e-01	ci left: 5.496192e-04	ci right 6.563258e-04	k: 499	n:830000
ZNF844   830000 perm   621 sec   (1337 perm/sec)   p_kst 6.012048e-04   p_cons 9.601542e-01   p_joint 6.286747e-03

Joint ci ratio: 5.379789e-02	ci left: 6.111939e-03	ci right 6.451003e-03	k: 5275	n:840000
Cons ci ratio: 8.717372e-04	ci left: 9.596960e-01	ci right 9.605341e-01	k: 806498	n:840000
KS ci ratio: 1.747317e-01	ci left: 5.464910e-04	ci right 6.522402e-04	k: 502	n:840000
ZNF844   840000 perm   636 sec   (1320 perm/sec)   p_kst 5.976190e-04   p_cons 9.601167e-01   p_joint 6.279762e-03

Joint ci ratio: 5.353506e-02	ci left: 6.100388e-03	ci right 6.437107e-03	k: 5327	n:850000
Cons ci ratio: 8.665563e-04	ci left: 9.597019e-01	ci right 9.605350e-01	k: 816102	n:850000
KS ci ratio: 1.735283e-01	ci left: 5.479381e-04	ci right 6.531606e-04	k: 509	n:850000
ZNF844   850000 perm   651 sec   (1306 perm/sec)   p_kst 5.988235e-04   p_cons 9.601200e-01   p_joint 6.267059e-03

Joint ci ratio: 5.123157e-02	ci left: 6.588360e-03	ci right 6.935905e-03	k: 5814	n:860000
Cons ci ratio: 8.615060e-04	ci left: 9.597041e-01	ci right 9.605324e-01	k: 825703	n:860000
KS ci ratio: 1.721829e-01	ci left: 5.504667e-04	ci right 6.552700e-04	k: 517	n:860000
ZNF844   860000 perm   666 sec   (1292 perm/sec)   p_kst 6.011628e-04   p_cons 9.601198e-01   p_joint 6.760465e-03

Joint ci ratio: 5.092155e-02	ci left: 6.593199e-03	ci right 6.938833e-03	k: 5885	n:870000
Cons ci ratio: 8.570184e-04	ci left: 9.596635e-01	ci right 9.604874e-01	k: 835267	n:870000
KS ci ratio: 1.713580e-01	ci left: 5.496395e-04	ci right 6.537322e-04	k: 522	n:870000
ZNF844   870000 perm   681 sec   (1277 perm/sec)   p_kst 6.000000e-04   p_cons 9.600770e-01   p_joint 6.764368e-03

Joint ci ratio: 3.940736e-02	ci left: 1.090015e-02	ci right 1.133944e-02	k: 9784	n:880000
Cons ci ratio: 8.520310e-04	ci left: 9.596753e-01	ci right 9.604944e-01	k: 844876	n:880000
KS ci ratio: 1.689514e-01	ci left: 5.597135e-04	ci right 6.640737e-04	k: 537	n:880000
ZNF844   880000 perm   697 sec   (1263 perm/sec)   p_kst 6.102273e-04   p_cons 9.600864e-01   p_joint 1.111818e-02

Joint ci ratio: 3.918173e-02	ci left: 1.090339e-02	ci right 1.134025e-02	k: 9897	n:890000
Cons ci ratio: 8.466824e-04	ci left: 9.597274e-01	ci right 9.605415e-01	k: 854521	n:890000
KS ci ratio: 1.678628e-01	ci left: 5.609583e-04	ci right 6.648086e-04	k: 544	n:890000
ZNF844   890000 perm   712 sec   (1250 perm/sec)   p_kst 6.112360e-04   p_cons 9.601360e-01   p_joint 1.112022e-02

Joint ci ratio: 3.895009e-02	ci left: 1.091208e-02	ci right 1.134664e-02	k: 10015	n:900000
Cons ci ratio: 8.418964e-04	ci left: 9.597360e-01	ci right 9.605455e-01	k: 864128	n:900000
KS ci ratio: 1.664935e-01	ci left: 5.643071e-04	ci right 6.678397e-04	k: 553	n:900000
ZNF844   900000 perm   727 sec   (1239 perm/sec)   p_kst 6.144444e-04   p_cons 9.601422e-01   p_joint 1.112778e-02

Joint ci ratio: 3.873218e-02	ci left: 1.091513e-02	ci right 1.134733e-02	k: 10128	n:910000
Cons ci ratio: 8.369261e-04	ci left: 9.597687e-01	ci right 9.605734e-01	k: 873757	n:910000
KS ci ratio: 1.653041e-01	ci left: 5.665322e-04	ci right 6.696566e-04	k: 561	n:910000
ZNF844   910000 perm   742 sec   (1226 perm/sec)   p_kst 6.164835e-04   p_cons 9.601725e-01   p_joint 1.112967e-02

Joint ci ratio: 3.847991e-02	ci left: 1.093966e-02	ci right 1.136995e-02	k: 10261	n:920000
Cons ci ratio: 8.324446e-04	ci left: 9.597636e-01	ci right 9.605639e-01	k: 883352	n:920000
KS ci ratio: 1.642840e-01	ci left: 5.676692e-04	ci right 6.702999e-04	k: 568	n:920000
ZNF844   920000 perm   758 sec   (1213 perm/sec)   p_kst 6.173913e-04   p_cons 9.601652e-01   p_joint 1.115326e-02

Joint ci ratio: 3.828469e-02	ci left: 1.093385e-02	ci right 1.136168e-02	k: 10366	n:930000
Cons ci ratio: 8.279762e-04	ci left: 9.597640e-01	ci right 9.605600e-01	k: 892952	n:930000
KS ci ratio: 1.637098e-01	ci left: 5.656897e-04	ci right 6.675699e-04	k: 572	n:930000
ZNF844   930000 perm   775 sec   (1200 perm/sec)   p_kst 6.150538e-04   p_cons 9.601634e-01   p_joint 1.114624e-02

Joint ci ratio: 3.807218e-02	ci left: 1.093976e-02	ci right 1.136539e-02	k: 10482	n:940000
Cons ci ratio: 8.236590e-04	ci left: 9.597569e-01	ci right 9.605488e-01	k: 902545	n:940000
KS ci ratio: 1.631416e-01	ci left: 5.637529e-04	ci right 6.648974e-04	k: 576	n:940000
ZNF844   940000 perm   791 sec   (1188 perm/sec)   p_kst 6.127660e-04   p_cons 9.601543e-01   p_joint 1.115106e-02

Joint ci ratio: 3.787222e-02	ci left: 1.094034e-02	ci right 1.136370e-02	k: 10593	n:950000
Cons ci ratio: 8.194538e-04	ci left: 9.597457e-01	ci right 9.605336e-01	k: 912134	n:950000
KS ci ratio: 1.627194e-01	ci left: 5.608478e-04	ci right 6.611851e-04	k: 579	n:950000
ZNF844   950000 perm   809 sec   (1175 perm/sec)   p_kst 6.094737e-04   p_cons 9.601411e-01   p_joint 1.115053e-02

Joint ci ratio: 3.766647e-02	ci left: 1.094607e-02	ci right 1.136731e-02	k: 10709	n:960000
Cons ci ratio: 8.148240e-04	ci left: 9.597809e-01	ci right 9.605643e-01	k: 921767	n:960000
KS ci ratio: 1.620226e-01	ci left: 5.600023e-04	ci right 6.597176e-04	k: 584	n:960000
ZNF844   960000 perm   823 sec   (1166 perm/sec)   p_kst 6.083333e-04   p_cons 9.601740e-01   p_joint 1.115521e-02

Joint ci ratio: 3.749032e-02	ci left: 1.093637e-02	ci right 1.135522e-02	k: 10810	n:970000
Cons ci ratio: 8.107303e-04	ci left: 9.597718e-01	ci right 9.605512e-01	k: 931358	n:970000
KS ci ratio: 1.610618e-01	ci left: 5.611539e-04	ci right 6.604243e-04	k: 591	n:970000
ZNF844   970000 perm   834 sec   (1162 perm/sec)   p_kst 6.092784e-04   p_cons 9.601629e-01   p_joint 1.114433e-02

Joint ci ratio: 3.726485e-02	ci left: 1.095720e-02	ci right 1.137427e-02	k: 10941	n:980000
Cons ci ratio: 8.065577e-04	ci left: 9.597762e-01	ci right 9.605517e-01	k: 940962	n:980000
KS ci ratio: 1.605205e-01	ci left: 5.593452e-04	ci right 6.579311e-04	k: 595	n:980000
ZNF844   980000 perm   851 sec   (1152 perm/sec)   p_kst 6.071429e-04   p_cons 9.601653e-01   p_joint 1.116429e-02

Joint ci ratio: 4.369630e-02	ci left: 7.887400e-03	ci right 8.240740e-03	k: 7982	n:990000
Cons ci ratio: 8.024807e-04	ci left: 9.597775e-01	ci right 9.605491e-01	k: 950563	n:990000
KS ci ratio: 1.597186e-01	ci left: 5.595130e-04	ci right 6.575885e-04	k: 601	n:990000
ZNF844   990000 perm   864 sec   (1146 perm/sec)   p_kst 6.070707e-04   p_cons 9.601646e-01   p_joint 8.062626e-03

Joint ci ratio: 4.345456e-02	ci left: 7.896557e-03	ci right 8.248301e-03	k: 8071	n:1000000
Cons ci ratio: 7.988092e-04	ci left: 9.597457e-01	ci right 9.605136e-01	k: 960131	n:1000000
KS ci ratio: 1.589286e-01	ci left: 5.596786e-04	ci right 6.572517e-04	k: 607	n:1000000
ZNF844   1000000 perm   874 sec   (1144 perm/sec)   p_kst 6.070000e-04   p_cons 9.601310e-01   p_joint 8.071000e-03

Joint ci ratio: 4.316350e-02	ci left: 7.925128e-03	ci right 8.275721e-03	k: 8180	n:1010000
Cons ci ratio: 7.944881e-04	ci left: 9.597821e-01	ci right 9.605459e-01	k: 969767	n:1010000
KS ci ratio: 1.582792e-01	ci left: 5.588913e-04	ci right 6.558911e-04	k: 612	n:1010000
ZNF844   1010000 perm   884 sec   (1142 perm/sec)   p_kst 6.059406e-04   p_cons 9.601653e-01   p_joint 8.099010e-03

Joint ci ratio: 4.290952e-02	ci left: 7.941507e-03	ci right 8.290707e-03	k: 8277	n:1020000
Cons ci ratio: 7.909957e-04	ci left: 9.597440e-01	ci right 9.605044e-01	k: 979328	n:1020000
KS ci ratio: 1.572562e-01	ci left: 5.609455e-04	ci right 6.576132e-04	k: 620	n:1020000
ZNF844   1020000 perm   898 sec   (1136 perm/sec)   p_kst 6.078431e-04   p_cons 9.601255e-01   p_joint 8.114706e-03

Joint ci ratio: 3.624608e-02	ci left: 1.102460e-02	ci right 1.143253e-02	k: 11564	n:1030000
Cons ci ratio: 7.871690e-04	ci left: 9.597436e-01	ci right 9.605004e-01	k: 988927	n:1030000
KS ci ratio: 1.571301e-01	ci left: 5.564320e-04	ci right 6.522378e-04	k: 621	n:1030000
ZNF844   1030000 perm   916 sec   (1125 perm/sec)   p_kst 6.029126e-04   p_cons 9.601233e-01   p_joint 1.122718e-02

Joint ci ratio: 4.247543e-02	ci left: 7.950503e-03	ci right 8.296476e-03	k: 8447	n:1040000
Cons ci ratio: 7.832989e-04	ci left: 9.597530e-01	ci right 9.605060e-01	k: 998536	n:1040000
KS ci ratio: 1.561292e-01	ci left: 5.584725e-04	ci right 6.539598e-04	k: 629	n:1040000
ZNF844   1040000 perm   932 sec   (1115 perm/sec)   p_kst 6.048077e-04   p_cons 9.601308e-01   p_joint 8.122115e-03

Joint ci ratio: 3.588470e-02	ci left: 1.103545e-02	ci right 1.143963e-02	k: 11798	n:1050000
Cons ci ratio: 7.798247e-04	ci left: 9.597287e-01	ci right 9.604783e-01	k: 1008110	n:1050000
KS ci ratio: 1.553910e-01	ci left: 5.586453e-04	ci right 6.536684e-04	k: 635	n:1050000
ZNF844   1050000 perm   951 sec   (1104 perm/sec)   p_kst 6.047619e-04   p_cons 9.601048e-01   p_joint 1.123619e-02

Joint ci ratio: 3.573532e-02	ci left: 1.102391e-02	ci right 1.142594e-02	k: 11897	n:1060000
Cons ci ratio: 7.762717e-04	ci left: 9.597171e-01	ci right 9.604634e-01	k: 1017697	n:1060000
KS ci ratio: 1.546631e-01	ci left: 5.588159e-04	ci right 6.533815e-04	k: 641	n:1060000
ZNF844   1060000 perm   969 sec   (1094 perm/sec)   p_kst 6.047170e-04   p_cons 9.600915e-01   p_joint 1.122358e-02

Joint ci ratio: 3.556981e-02	ci left: 1.102369e-02	ci right 1.142382e-02	k: 12008	n:1070000
Cons ci ratio: 7.728516e-04	ci left: 9.596974e-01	ci right 9.604403e-01	k: 1027275	n:1070000
KS ci ratio: 1.544231e-01	ci left: 5.553901e-04	ci right 6.492166e-04	k: 643	n:1070000
ZNF844   1070000 perm   985 sec   (1086 perm/sec)   p_kst 6.009346e-04   p_cons 9.600701e-01   p_joint 1.122243e-02

Joint ci ratio: 3.541692e-02	ci left: 1.101706e-02	ci right 1.141520e-02	k: 12112	n:1080000
Cons ci ratio: 7.694668e-04	ci left: 9.596789e-01	ci right 9.604186e-01	k: 1036854	n:1080000
KS ci ratio: 1.537087e-01	ci left: 5.555890e-04	ci right 6.489749e-04	k: 649	n:1080000
ZNF844   1080000 perm   1000 sec   (1080 perm/sec)   p_kst 6.009259e-04   p_cons 9.600500e-01   p_joint 1.121481e-02

Joint ci ratio: 3.526890e-02	ci left: 1.100874e-02	ci right 1.140488e-02	k: 12214	n:1090000
Cons ci ratio: 7.659060e-04	ci left: 9.596830e-01	ci right 9.604192e-01	k: 1046457	n:1090000
KS ci ratio: 1.530042e-01	ci left: 5.557852e-04	ci right 6.487367e-04	k: 655	n:1090000
ZNF844   1090000 perm   1017 sec   (1072 perm/sec)   p_kst 6.009174e-04   p_cons 9.600523e-01   p_joint 1.120550e-02

Joint ci ratio: 3.511984e-02	ci left: 1.100237e-02	ci right 1.139657e-02	k: 12318	n:1100000
Cons ci ratio: 7.621683e-04	ci left: 9.597097e-01	ci right 9.604424e-01	k: 1056085	n:1100000
KS ci ratio: 1.525399e-01	ci left: 5.542299e-04	ci right 6.466144e-04	k: 659	n:1100000
ZNF844   1100000 perm   1034 sec   (1063 perm/sec)   p_kst 5.990909e-04   p_cons 9.600773e-01   p_joint 1.119818e-02

Joint ci ratio: 3.497551e-02	ci left: 1.099434e-02	ci right 1.138660e-02	k: 12420	n:1110000
Cons ci ratio: 7.585647e-04	ci left: 9.597279e-01	ci right 9.604571e-01	k: 1065704	n:1110000
KS ci ratio: 1.516236e-01	ci left: 5.561699e-04	ci right 6.482703e-04	k: 667	n:1110000
ZNF844   1110000 perm   1048 sec   (1059 perm/sec)   p_kst 6.009009e-04   p_cons 9.600937e-01   p_joint 1.118919e-02

Joint ci ratio: 3.856229e-02	ci left: 8.965639e-03	ci right 9.319049e-03	k: 10238	n:1120000
Cons ci ratio: 7.552581e-04	ci left: 9.597206e-01	ci right 9.604466e-01	k: 1075295	n:1120000
KS ci ratio: 1.510594e-01	ci left: 5.554993e-04	ci right 6.471154e-04	k: 672	n:1120000
ZNF844   1120000 perm   1065 sec   (1052 perm/sec)   p_kst 6.000000e-04   p_cons 9.600848e-01   p_joint 9.141071e-03

Joint ci ratio: 3.841084e-02	ci left: 8.957288e-03	ci right 9.308951e-03	k: 10319	n:1130000
Cons ci ratio: 7.517945e-04	ci left: 9.597339e-01	ci right 9.604566e-01	k: 1084909	n:1130000
KS ci ratio: 1.507241e-01	ci left: 5.531379e-04	ci right 6.441438e-04	k: 675	n:1130000
ZNF844   1130000 perm   1080 sec   (1047 perm/sec)   p_kst 5.973451e-04   p_cons 9.600965e-01   p_joint 9.131858e-03

Joint ci ratio: 3.822038e-02	ci left: 8.968202e-03	ci right 9.318509e-03	k: 10422	n:1140000
Cons ci ratio: 7.485752e-04	ci left: 9.597268e-01	ci right 9.604463e-01	k: 1094500	n:1140000
KS ci ratio: 1.495122e-01	ci left: 5.575726e-04	ci right 6.485046e-04	k: 686	n:1140000
ZNF844   1140000 perm   1098 sec   (1038 perm/sec)   p_kst 6.017544e-04   p_cons 9.600877e-01   p_joint 9.142105e-03

Joint ci ratio: 4.403313e-02	ci left: 6.693610e-03	ci right 6.995839e-03	k: 7870	n:1150000
Cons ci ratio: 7.451178e-04	ci left: 9.597485e-01	ci right 9.604648e-01	k: 1104124	n:1150000
KS ci ratio: 1.487562e-01	ci left: 5.585840e-04	ci right 6.491793e-04	k: 693	n:1150000
ZNF844   1150000 perm   1117 sec   (1030 perm/sec)   p_kst 6.026087e-04   p_cons 9.601078e-01   p_joint 6.843478e-03

Joint ci ratio: 4.389987e-02	ci left: 6.676829e-03	ci right 6.977365e-03	k: 7918	n:1160000
Cons ci ratio: 7.417495e-04	ci left: 9.597656e-01	ci right 9.604786e-01	k: 1113743	n:1160000
KS ci ratio: 1.484359e-01	ci left: 5.562586e-04	ci right 6.462653e-04	k: 696	n:1160000
ZNF844   1160000 perm   1134 sec   (1023 perm/sec)   p_kst 6.000000e-04   p_cons 9.601233e-01   p_joint 6.825862e-03

Joint ci ratio: 4.476290e-02	ci left: 6.366171e-03	ci right 6.658502e-03	k: 7618	n:1170000
Cons ci ratio: 7.386159e-04	ci left: 9.597627e-01	ci right 9.604727e-01	k: 1123339	n:1170000
KS ci ratio: 1.480119e-01	ci left: 5.547963e-04	ci right 6.442872e-04	k: 700	n:1170000
ZNF844   1170000 perm   1151 sec   (1017 perm/sec)   p_kst 5.982906e-04   p_cons 9.601188e-01   p_joint 6.511111e-03

Joint ci ratio: 4.461410e-02	ci left: 6.354957e-03	ci right 6.645778e-03	k: 7669	n:1180000
Cons ci ratio: 7.353426e-04	ci left: 9.597785e-01	ci right 9.604853e-01	k: 1132957	n:1180000
KS ci ratio: 1.471744e-01	ci left: 5.566239e-04	ci right 6.458569e-04	k: 708	n:1180000
ZNF844   1180000 perm   1171 sec   (1007 perm/sec)   p_kst 6.000000e-04   p_cons 9.601331e-01   p_joint 6.499153e-03

Joint ci ratio: 4.440603e-02	ci left: 6.361386e-03	ci right 6.651108e-03	k: 7741	n:1190000
Cons ci ratio: 7.321686e-04	ci left: 9.597882e-01	ci right 9.604920e-01	k: 1142568	n:1190000
KS ci ratio: 1.464531e-01	ci left: 5.576127e-04	ci right 6.465278e-04	k: 715	n:1190000
ZNF844   1190000 perm   1187 sec   (1002 perm/sec)   p_kst 6.008403e-04   p_cons 9.601412e-01   p_joint 6.505042e-03

Joint ci ratio: 4.424361e-02	ci left: 6.355347e-03	ci right 6.643709e-03	k: 7798	n:1200000
Cons ci ratio: 7.292497e-04	ci left: 9.597751e-01	ci right 9.604760e-01	k: 1152152	n:1200000
KS ci ratio: 1.459445e-01	ci left: 5.569802e-04	ci right 6.454591e-04	k: 720	n:1200000
ZNF844   1200000 perm   1208 sec   (993 perm/sec)   p_kst 6.000000e-04   p_cons 9.601267e-01   p_joint 6.498333e-03

Joint ci ratio: 3.952888e-02	ci left: 7.902593e-03	ci right 8.222083e-03	k: 9754	n:1210000
Cons ci ratio: 7.258087e-04	ci left: 9.598211e-01	ci right 9.605188e-01	k: 1161807	n:1210000
KS ci ratio: 1.455415e-01	ci left: 5.555622e-04	ci right 6.435510e-04	k: 724	n:1210000
ZNF844   1210000 perm   1227 sec   (986 perm/sec)   p_kst 5.983471e-04   p_cons 9.601711e-01   p_joint 8.061157e-03

Joint ci ratio: 3.935368e-02	ci left: 7.908426e-03	ci right 8.226703e-03	k: 9841	n:1220000
Cons ci ratio: 7.224537e-04	ci left: 9.598623e-01	ci right 9.605568e-01	k: 1171457	n:1220000
KS ci ratio: 1.450422e-01	ci left: 5.549578e-04	ci right 6.425233e-04	k: 729	n:1220000
ZNF844   1220000 perm   1243 sec   (982 perm/sec)   p_kst 5.975410e-04   p_cons 9.602107e-01   p_joint 8.066393e-03

Joint ci ratio: 3.921863e-02	ci left: 7.898870e-03	ci right 8.215648e-03	k: 9909	n:1230000
Cons ci ratio: 7.193203e-04	ci left: 9.598841e-01	ci right 9.605756e-01	k: 1181084	n:1230000
KS ci ratio: 1.444498e-01	ci left: 5.551474e-04	ci right 6.423541e-04	k: 735	n:1230000
ZNF844   1230000 perm   1260 sec   (976 perm/sec)   p_kst 5.975610e-04   p_cons 9.602309e-01   p_joint 8.056098e-03

Joint ci ratio: 3.903570e-02	ci left: 7.909437e-03	ci right 8.225125e-03	k: 10002	n:1240000
Cons ci ratio: 7.164314e-04	ci left: 9.598836e-01	ci right 9.605723e-01	k: 1190684	n:1240000
KS ci ratio: 1.433820e-01	ci left: 5.592220e-04	ci right 6.463639e-04	k: 746	n:1240000
ZNF844   1240000 perm   1280 sec   (969 perm/sec)   p_kst 6.016129e-04   p_cons 9.602290e-01   p_joint 8.066129e-03

Joint ci ratio: 3.887666e-02	ci left: 7.911123e-03	ci right 8.225563e-03	k: 10084	n:1250000
Cons ci ratio: 7.137638e-04	ci left: 9.598631e-01	ci right 9.605492e-01	k: 1200259	n:1250000
KS ci ratio: 1.428097e-01	ci left: 5.593764e-04	ci right 6.461647e-04	k: 752	n:1250000
ZNF844   1250000 perm   1295 sec   (965 perm/sec)   p_kst 6.016000e-04   p_cons 9.602072e-01   p_joint 8.067200e-03

Joint ci ratio: 3.873683e-02	ci left: 7.905710e-03	ci right 8.218780e-03	k: 10157	n:1260000
Cons ci ratio: 7.106308e-04	ci left: 9.598963e-01	ci right 9.605794e-01	k: 1209901	n:1260000
KS ci ratio: 1.422441e-01	ci left: 5.595290e-04	ci right 6.459680e-04	k: 758	n:1260000
ZNF844   1260000 perm   1313 sec   (960 perm/sec)   p_kst 6.015873e-04   p_cons 9.602389e-01   p_joint 8.061111e-03

Joint ci ratio: 4.301473e-02	ci left: 6.357076e-03	ci right 6.637307e-03	k: 8250	n:1270000
Cons ci ratio: 7.081222e-04	ci left: 9.598657e-01	ci right 9.605464e-01	k: 1219463	n:1270000
KS ci ratio: 1.419640e-01	ci left: 5.574014e-04	ci right 6.433278e-04	k: 761	n:1270000
ZNF844   1270000 perm   1333 sec   (953 perm/sec)   p_kst 5.992126e-04   p_cons 9.602071e-01   p_joint 6.496063e-03

Joint ci ratio: 3.842782e-02	ci left: 7.909073e-03	ci right 8.219722e-03	k: 10321	n:1280000
Cons ci ratio: 6.649468e-04	ci left: 9.641560e-01	ci right 9.647981e-01	k: 1234532	n:1280000
KS ci ratio: 1.414083e-01	ci left: 5.575681e-04	ci right 6.431554e-04	k: 767	n:1280000
ZNF844   1280000 perm   1350 sec   (948 perm/sec)   p_kst 5.992188e-04   p_cons 9.644781e-01   p_joint 8.063281e-03

Joint ci ratio: 3.828906e-02	ci left: 7.905344e-03	ci right 8.214701e-03	k: 10396	n:1290000
Cons ci ratio: 6.622729e-04	ci left: 9.641668e-01	ci right 9.648063e-01	k: 1244189	n:1290000
KS ci ratio: 1.405868e-01	ci left: 5.599765e-04	ci right 6.453923e-04	k: 776	n:1290000
ZNF844   1290000 perm   1367 sec   (944 perm/sec)   p_kst 6.015504e-04   p_cons 9.644876e-01   p_joint 8.058915e-03

Joint ci ratio: 3.816280e-02	ci left: 7.897102e-03	ci right 8.205096e-03	k: 10465	n:1300000
Cons ci ratio: 6.597939e-04	ci left: 9.641604e-01	ci right 9.647975e-01	k: 1253824	n:1300000
KS ci ratio: 1.399577e-01	ci left: 5.608647e-04	ci right 6.460012e-04	k: 783	n:1300000
ZNF844   1300000 perm   1388 sec   (936 perm/sec)   p_kst 6.023077e-04   p_cons 9.644800e-01   p_joint 8.050000e-03

Joint ci ratio: 3.800507e-02	ci left: 7.902599e-03	ci right 8.209505e-03	k: 10552	n:1310000
Cons ci ratio: 6.572473e-04	ci left: 9.641641e-01	ci right 9.647987e-01	k: 1263472	n:1310000
KS ci ratio: 1.392490e-01	ci left: 5.624769e-04	ci right 6.473899e-04	k: 791	n:1310000
ZNF844   1310000 perm   1409 sec   (930 perm/sec)   p_kst 6.038168e-04   p_cons 9.644824e-01   p_joint 8.054962e-03

Joint ci ratio: 3.454939e-02	ci left: 9.491438e-03	ci right 9.825870e-03	k: 12748	n:1320000
Cons ci ratio: 6.548530e-04	ci left: 9.641548e-01	ci right 9.647871e-01	k: 1273103	n:1320000
KS ci ratio: 1.384643e-01	ci left: 5.647970e-04	ci right 6.495403e-04	k: 800	n:1320000
ZNF844   1320000 perm   1427 sec   (925 perm/sec)   p_kst 6.060606e-04   p_cons 9.644720e-01   p_joint 9.657576e-03

Joint ci ratio: 2.955512e-02	ci left: 1.286117e-02	ci right 1.324772e-02	k: 17361	n:1330000
Cons ci ratio: 6.523916e-04	ci left: 9.641554e-01	ci right 9.647854e-01	k: 1282747	n:1330000
KS ci ratio: 1.378632e-01	ci left: 5.656317e-04	ci right 6.501014e-04	k: 807	n:1330000
ZNF844   1330000 perm   1447 sec   (919 perm/sec)   p_kst 6.067669e-04   p_cons 9.644714e-01   p_joint 1.305338e-02

Joint ci ratio: 2.944253e-02	ci left: 1.286371e-02	ci right 1.324884e-02	k: 17494	n:1340000
Cons ci ratio: 6.499578e-04	ci left: 9.641561e-01	ci right 9.647837e-01	k: 1292391	n:1340000
KS ci ratio: 1.371016e-01	ci left: 5.678960e-04	ci right 6.521972e-04	k: 816	n:1340000
ZNF844   1340000 perm   1467 sec   (913 perm/sec)   p_kst 6.089552e-04   p_cons 9.644709e-01   p_joint 1.305522e-02

Joint ci ratio: 2.932954e-02	ci left: 1.286769e-02	ci right 1.325144e-02	k: 17629	n:1350000
Cons ci ratio: 6.472570e-04	ci left: 9.641880e-01	ci right 9.648130e-01	k: 1302077	n:1350000
KS ci ratio: 1.364351e-01	ci left: 5.694126e-04	ci right 6.534946e-04	k: 824	n:1350000
ZNF844   1350000 perm   1489 sec   (907 perm/sec)   p_kst 6.103704e-04   p_cons 9.645015e-01   p_joint 1.305852e-02

Joint ci ratio: 2.920951e-02	ci left: 1.287891e-02	ci right 1.326140e-02	k: 17774	n:1360000
Cons ci ratio: 6.447137e-04	ci left: 9.642061e-01	ci right 9.648287e-01	k: 1311745	n:1360000
KS ci ratio: 1.358599e-01	ci left: 5.701975e-04	ci right 6.540118e-04	k: 831	n:1360000
ZNF844   1360000 perm   1511 sec   (900 perm/sec)   p_kst 6.110294e-04   p_cons 9.645184e-01   p_joint 1.306912e-02

Joint ci ratio: 2.911647e-02	ci left: 1.286751e-02	ci right 1.324842e-02	k: 17888	n:1370000
Cons ci ratio: 6.423919e-04	ci left: 9.642035e-01	ci right 9.648238e-01	k: 1321385	n:1370000
KS ci ratio: 1.351309e-01	ci left: 5.723822e-04	ci right 6.560298e-04	k: 840	n:1370000
ZNF844   1370000 perm   1533 sec   (894 perm/sec)   p_kst 6.131387e-04   p_cons 9.645146e-01   p_joint 1.305693e-02

Joint ci ratio: 2.899659e-02	ci left: 1.288074e-02	ci right 1.326044e-02	k: 18036	n:1380000
Cons ci ratio: 6.400205e-04	ci left: 9.642089e-01	ci right 9.648269e-01	k: 1331036	n:1380000
KS ci ratio: 1.349707e-01	ci left: 5.696347e-04	ci right 6.527742e-04	k: 842	n:1380000
ZNF844   1380000 perm   1554 sec   (888 perm/sec)   p_kst 6.101449e-04   p_cons 9.645188e-01   p_joint 1.306957e-02

Joint ci ratio: 2.889588e-02	ci left: 1.287806e-02	ci right 1.325635e-02	k: 18162	n:1390000
Cons ci ratio: 6.378628e-04	ci left: 9.641939e-01	ci right 9.648099e-01	k: 1340659	n:1390000
KS ci ratio: 1.344929e-01	ci left: 5.697077e-04	ci right 6.525400e-04	k: 848	n:1390000
ZNF844   1390000 perm   1571 sec   (885 perm/sec)   p_kst 6.100719e-04   p_cons 9.645029e-01   p_joint 1.306619e-02

Joint ci ratio: 2.879383e-02	ci left: 1.287755e-02	ci right 1.325447e-02	k: 18291	n:1400000
Cons ci ratio: 6.357398e-04	ci left: 9.641778e-01	ci right 9.647917e-01	k: 1350280	n:1400000
KS ci ratio: 1.342561e-01	ci left: 5.677091e-04	ci right 6.500939e-04	k: 851	n:1400000
ZNF844   1400000 perm   1592 sec   (879 perm/sec)   p_kst 6.078571e-04   p_cons 9.644857e-01   p_joint 1.306500e-02

Joint ci ratio: 2.869048e-02	ci left: 1.287917e-02	ci right 1.325475e-02	k: 18423	n:1410000
Cons ci ratio: 6.333690e-04	ci left: 9.641911e-01	ci right 9.648027e-01	k: 1359942	n:1410000
KS ci ratio: 1.336301e-01	ci left: 5.691665e-04	ci right 6.513470e-04	k: 859	n:1410000
ZNF844   1410000 perm   1614 sec   (873 perm/sec)   p_kst 6.092199e-04   p_cons 9.644979e-01   p_joint 1.306596e-02

Joint ci ratio: 2.859527e-02	ci left: 1.287447e-02	ci right 1.324865e-02	k: 18546	n:1420000
Cons ci ratio: 6.309140e-04	ci left: 9.642163e-01	ci right 9.648255e-01	k: 1369621	n:1420000
KS ci ratio: 1.335527e-01	ci left: 5.658389e-04	ci right 6.474879e-04	k: 860	n:1420000
ZNF844   1420000 perm   1631 sec   (871 perm/sec)   p_kst 6.056338e-04   p_cons 9.645218e-01   p_joint 1.306056e-02

Joint ci ratio: 2.847859e-02	ci left: 1.288997e-02	ci right 1.326305e-02	k: 18698	n:1430000
Cons ci ratio: 6.287826e-04	ci left: 9.642088e-01	ci right 9.648159e-01	k: 1379254	n:1430000
KS ci ratio: 1.330898e-01	ci left: 5.659378e-04	ci right 6.472957e-04	k: 866	n:1430000
ZNF844   1430000 perm   1648 sec   (868 perm/sec)   p_kst 6.055944e-04   p_cons 9.645133e-01   p_joint 1.307552e-02

Joint ci ratio: 2.839082e-02	ci left: 1.288044e-02	ci right 1.325208e-02	k: 18814	n:1440000
Cons ci ratio: 6.265963e-04	ci left: 9.642097e-01	ci right 9.648148e-01	k: 1388899	n:1440000
KS ci ratio: 1.326316e-01	ci left: 5.660359e-04	ci right 6.471056e-04	k: 872	n:1440000
ZNF844   1440000 perm   1664 sec   (866 perm/sec)   p_kst 6.055556e-04   p_cons 9.645132e-01   p_joint 1.306528e-02

Joint ci ratio: 2.828190e-02	ci left: 1.289090e-02	ci right 1.326139e-02	k: 18959	n:1450000
Cons ci ratio: 6.242880e-04	ci left: 9.642266e-01	ci right 9.648294e-01	k: 1398567	n:1450000
KS ci ratio: 1.323289e-01	ci left: 5.647994e-04	ci right 6.454929e-04	k: 876	n:1450000
ZNF844   1450000 perm   1685 sec   (861 perm/sec)   p_kst 6.041379e-04   p_cons 9.645290e-01   p_joint 1.307517e-02

Joint ci ratio: 2.817648e-02	ci left: 1.289918e-02	ci right 1.326850e-02	k: 19101	n:1460000
Cons ci ratio: 6.222602e-04	ci left: 9.642151e-01	ci right 9.648159e-01	k: 1408194	n:1460000
KS ci ratio: 1.318786e-01	ci left: 5.649047e-04	ci right 6.453170e-04	k: 882	n:1460000
ZNF844   1460000 perm   1703 sec   (857 perm/sec)   p_kst 6.041096e-04   p_cons 9.645164e-01   p_joint 1.308288e-02

Joint ci ratio: 2.808109e-02	ci left: 1.289925e-02	ci right 1.326730e-02	k: 19231	n:1470000
Cons ci ratio: 6.203074e-04	ci left: 9.641976e-01	ci right 9.647965e-01	k: 1417812	n:1470000
KS ci ratio: 1.318042e-01	ci left: 5.617195e-04	ci right 6.416299e-04	k: 883	n:1470000
ZNF844   1470000 perm   1723 sec   (853 perm/sec)   p_kst 6.006803e-04   p_cons 9.644980e-01   p_joint 1.308231e-02

Joint ci ratio: 2.798082e-02	ci left: 1.290468e-02	ci right 1.327155e-02	k: 19369	n:1480000
Cons ci ratio: 6.182752e-04	ci left: 9.641911e-01	ci right 9.647881e-01	k: 1427446	n:1480000
KS ci ratio: 1.309915e-01	ci left: 5.651123e-04	ci right 6.449710e-04	k: 894	n:1480000
ZNF844   1480000 perm   1741 sec   (850 perm/sec)   p_kst 6.040541e-04   p_cons 9.644905e-01   p_joint 1.308716e-02

Joint ci ratio: 2.788595e-02	ci left: 1.290604e-02	ci right 1.327169e-02	k: 19501	n:1490000
Cons ci ratio: 6.161540e-04	ci left: 9.641969e-01	ci right 9.647919e-01	k: 1437098	n:1490000
KS ci ratio: 1.306272e-01	ci left: 5.645655e-04	ci right 6.441079e-04	k: 899	n:1490000
ZNF844   1490000 perm   1763 sec   (845 perm/sec)   p_kst 6.033557e-04   p_cons 9.644953e-01   p_joint 1.308792e-02

Joint ci ratio: 2.776698e-02	ci left: 1.293057e-02	ci right 1.329532e-02	k: 19668	n:1500000
Cons ci ratio: 6.141204e-04	ci left: 9.641953e-01	ci right 9.647883e-01	k: 1446739	n:1500000
KS ci ratio: 1.299787e-01	ci left: 5.666062e-04	ci right 6.460092e-04	k: 908	n:1500000
ZNF844   1500000 perm   1782 sec   (842 perm/sec)   p_kst 6.053333e-04   p_cons 9.644927e-01   p_joint 1.311200e-02

Joint ci ratio: 2.767709e-02	ci left: 1.292911e-02	ci right 1.329263e-02	k: 19796	n:1510000
Cons ci ratio: 6.120475e-04	ci left: 9.642003e-01	ci right 9.647913e-01	k: 1456390	n:1510000
KS ci ratio: 1.293399e-01	ci left: 5.686208e-04	ci right 6.478845e-04	k: 917	n:1510000
ZNF844   1510000 perm   1798 sec   (840 perm/sec)   p_kst 6.072848e-04   p_cons 9.644967e-01   p_joint 1.310993e-02

Joint ci ratio: 2.759229e-02	ci left: 1.292376e-02	ci right 1.328599e-02	k: 19918	n:1520000
Cons ci ratio: 6.101302e-04	ci left: 9.641901e-01	ci right 9.647792e-01	k: 1466018	n:1520000
KS ci ratio: 1.289193e-01	ci left: 5.686997e-04	ci right 6.476969e-04	k: 923	n:1520000
ZNF844   1520000 perm   1814 sec   (838 perm/sec)   p_kst 6.072368e-04   p_cons 9.644855e-01   p_joint 1.310395e-02

Joint ci ratio: 2.750826e-02	ci left: 1.291848e-02	ci right 1.327944e-02	k: 20040	n:1530000
Cons ci ratio: 6.081902e-04	ci left: 9.641846e-01	ci right 9.647718e-01	k: 1475653	n:1530000
KS ci ratio: 1.285719e-01	ci left: 5.681455e-04	ci right 6.468367e-04	k: 928	n:1530000
ZNF844   1530000 perm   1835 sec   (834 perm/sec)   p_kst 6.065359e-04   p_cons 9.644791e-01   p_joint 1.309804e-02

Joint ci ratio: 2.740709e-02	ci left: 1.293004e-02	ci right 1.328998e-02	k: 20188	n:1540000
Cons ci ratio: 6.062226e-04	ci left: 9.641844e-01	ci right 9.647697e-01	k: 1485296	n:1540000
KS ci ratio: 1.276814e-01	ci left: 5.726273e-04	ci right 6.513484e-04	k: 941	n:1540000
ZNF844   1540000 perm   1858 sec   (829 perm/sec)   p_kst 6.110390e-04   p_cons 9.644779e-01   p_joint 1.310909e-02

Joint ci ratio: 2.731316e-02	ci left: 1.293568e-02	ci right 1.329452e-02	k: 20327	n:1550000
Cons ci ratio: 6.042512e-04	ci left: 9.641868e-01	ci right 9.647702e-01	k: 1494943	n:1550000
KS ci ratio: 1.274787e-01	ci left: 5.708066e-04	ci right 6.491434e-04	k: 944	n:1550000
ZNF844   1550000 perm   1879 sec   (825 perm/sec)   p_kst 6.090323e-04   p_cons 9.644794e-01   p_joint 1.311419e-02

Joint ci ratio: 2.723772e-02	ci left: 1.292470e-02	ci right 1.328223e-02	k: 20440	n:1560000
Cons ci ratio: 6.023215e-04	ci left: 9.641866e-01	ci right 9.647681e-01	k: 1504586	n:1560000
KS ci ratio: 1.271428e-01	ci left: 5.702506e-04	ci right 6.482894e-04	k: 949	n:1560000
ZNF844   1560000 perm   1894 sec   (824 perm/sec)   p_kst 6.083333e-04   p_cons 9.644782e-01   p_joint 1.310256e-02

Joint ci ratio: 2.715286e-02	ci left: 1.292336e-02	ci right 1.327972e-02	k: 20568	n:1570000
Cons ci ratio: 6.005831e-04	ci left: 9.641665e-01	ci right 9.647464e-01	k: 1514198	n:1570000
KS ci ratio: 1.266769e-01	ci left: 5.709355e-04	ci right 6.487602e-04	k: 956	n:1570000
ZNF844   1570000 perm   1908 sec   (823 perm/sec)   p_kst 6.089172e-04   p_cons 9.644573e-01   p_joint 1.310064e-02

Joint ci ratio: 2.706151e-02	ci left: 1.292894e-02	ci right 1.328424e-02	k: 20707	n:1580000
Cons ci ratio: 5.987821e-04	ci left: 9.641557e-01	ci right 9.647338e-01	k: 1523824	n:1580000
KS ci ratio: 1.261507e-01	ci left: 5.722252e-04	ci right 6.498774e-04	k: 964	n:1580000
ZNF844   1580000 perm   1923 sec   (822 perm/sec)   p_kst 6.101266e-04   p_cons 9.644456e-01   p_joint 1.310570e-02

Joint ci ratio: 2.697566e-02	ci left: 1.293009e-02	ci right 1.328427e-02	k: 20839	n:1590000
Cons ci ratio: 5.969479e-04	ci left: 9.641506e-01	ci right 9.647269e-01	k: 1533459	n:1590000
KS ci ratio: 1.255019e-01	ci left: 5.747177e-04	ci right 6.522773e-04	k: 974	n:1590000
ZNF844   1590000 perm   1941 sec   (819 perm/sec)   p_kst 6.125786e-04   p_cons 9.644396e-01   p_joint 1.310629e-02

Joint ci ratio: 2.689453e-02	ci left: 1.292749e-02	ci right 1.328052e-02	k: 20965	n:1600000
Cons ci ratio: 5.950708e-04	ci left: 9.641525e-01	ci right 9.647270e-01	k: 1543105	n:1600000
KS ci ratio: 1.252454e-01	ci left: 5.735473e-04	ci right 6.507789e-04	k: 978	n:1600000
ZNF844   1600000 perm   1964 sec   (815 perm/sec)   p_kst 6.112500e-04   p_cons 9.644406e-01   p_joint 1.310313e-02

Joint ci ratio: 2.681347e-02	ci left: 1.292555e-02	ci right 1.327745e-02	k: 21092	n:1610000
Cons ci ratio: 5.931898e-04	ci left: 9.641569e-01	ci right 9.647296e-01	k: 1552755	n:1610000
KS ci ratio: 1.250540e-01	ci left: 5.717899e-04	ci right 6.486585e-04	k: 981	n:1610000
ZNF844   1610000 perm   1989 sec   (810 perm/sec)   p_kst 6.093168e-04   p_cons 9.644441e-01   p_joint 1.310062e-02

Joint ci ratio: 2.672422e-02	ci left: 1.293222e-02	ci right 1.328311e-02	k: 21233	n:1620000
Cons ci ratio: 5.911722e-04	ci left: 9.641792e-01	ci right 9.647500e-01	k: 1562434	n:1620000
KS ci ratio: 1.248636e-01	ci left: 5.700542e-04	ci right 6.465642e-04	k: 984	n:1620000
ZNF844   1620000 perm   2015 sec   (804 perm/sec)   p_kst 6.074074e-04   p_cons 9.644654e-01   p_joint 1.310679e-02

Joint ci ratio: 2.663963e-02	ci left: 1.293515e-02	ci right 1.328499e-02	k: 21368	n:1630000
Cons ci ratio: 5.894332e-04	ci left: 9.641711e-01	ci right 9.647402e-01	k: 1572064	n:1630000
KS ci ratio: 1.244222e-01	ci left: 5.707176e-04	ci right 6.470258e-04	k: 991	n:1630000
ZNF844   1630000 perm   2039 sec   (799 perm/sec)   p_kst 6.079755e-04   p_cons 9.644564e-01   p_joint 1.310920e-02

Joint ci ratio: 2.656712e-02	ci left: 1.292714e-02	ci right 1.327580e-02	k: 21485	n:1640000
Cons ci ratio: 5.877722e-04	ci left: 9.641557e-01	ci right 9.647232e-01	k: 1581682	n:1640000
KS ci ratio: 1.237996e-01	ci left: 5.731459e-04	ci right 6.493673e-04	k: 1001	n:1640000
ZNF844   1640000 perm   2063 sec   (795 perm/sec)   p_kst 6.103659e-04   p_cons 9.644402e-01   p_joint 1.310061e-02

Joint ci ratio: 2.649892e-02	ci left: 1.291562e-02	ci right 1.326306e-02	k: 21596	n:1650000
Cons ci ratio: 5.858558e-04	ci left: 9.641721e-01	ci right 9.647378e-01	k: 1591352	n:1650000
KS ci ratio: 1.234306e-01	ci left: 5.731962e-04	ci right 6.491805e-04	k: 1007	n:1650000
ZNF844   1650000 perm   2080 sec   (793 perm/sec)   p_kst 6.103030e-04   p_cons 9.644558e-01   p_joint 1.308848e-02

Joint ci ratio: 2.642323e-02	ci left: 1.291202e-02	ci right 1.325836e-02	k: 21720	n:1660000
Cons ci ratio: 5.841273e-04	ci left: 9.641684e-01	ci right 9.647324e-01	k: 1600989	n:1660000
KS ci ratio: 1.231865e-01	ci left: 5.720785e-04	ci right 6.477537e-04	k: 1011	n:1660000
ZNF844   1660000 perm   2102 sec   (790 perm/sec)   p_kst 6.090361e-04   p_cons 9.644512e-01   p_joint 1.308434e-02

Joint ci ratio: 2.633536e-02	ci left: 1.292096e-02	ci right 1.326636e-02	k: 21865	n:1670000
Cons ci ratio: 5.823326e-04	ci left: 9.641744e-01	ci right 9.647366e-01	k: 1610642	n:1670000
KS ci ratio: 1.226423e-01	ci left: 5.738764e-04	ci right 6.494297e-04	k: 1020	n:1670000
ZNF844   1670000 perm   2127 sec   (785 perm/sec)   p_kst 6.107784e-04   p_cons 9.644563e-01   p_joint 1.309281e-02

Joint ci ratio: 2.626953e-02	ci left: 1.290909e-02	ci right 1.325330e-02	k: 21975	n:1680000
Cons ci ratio: 5.806148e-04	ci left: 9.641731e-01	ci right 9.647336e-01	k: 1620283	n:1680000
KS ci ratio: 1.221052e-01	ci left: 5.756537e-04	ci right 6.510851e-04	k: 1029	n:1680000
ZNF844   1680000 perm   2151 sec   (781 perm/sec)   p_kst 6.125000e-04   p_cons 9.644542e-01   p_joint 1.308036e-02

Joint ci ratio: 2.618738e-02	ci left: 1.291383e-02	ci right 1.325707e-02	k: 22113	n:1690000
Cons ci ratio: 5.787822e-04	ci left: 9.641873e-01	ci right 9.647461e-01	k: 1629950	n:1690000
KS ci ratio: 1.216923e-01	ci left: 5.762632e-04	ci right 6.515007e-04	k: 1036	n:1690000
ZNF844   1690000 perm   2171 sec   (778 perm/sec)   p_kst 6.130178e-04   p_cons 9.644675e-01   p_joint 1.308462e-02

Joint ci ratio: 2.610719e-02	ci left: 1.291734e-02	ci right 1.325961e-02	k: 22249	n:1700000
Cons ci ratio: 5.770114e-04	ci left: 9.641960e-01	ci right 9.647530e-01	k: 1639608	n:1700000
KS ci ratio: 1.213418e-01	ci left: 5.762955e-04	ci right 6.513050e-04	k: 1042	n:1700000
ZNF844   1700000 perm   2190 sec   (776 perm/sec)   p_kst 6.129412e-04   p_cons 9.644753e-01   p_joint 1.308765e-02

Joint ci ratio: 2.603774e-02	ci left: 1.291094e-02	ci right 1.325212e-02	k: 22368	n:1710000
Cons ci ratio: 5.753303e-04	ci left: 9.641958e-01	ci right 9.647512e-01	k: 1649251	n:1710000
KS ci ratio: 1.208216e-01	ci left: 5.780292e-04	ci right 6.529187e-04	k: 1051	n:1710000
ZNF844   1710000 perm   2209 sec   (774 perm/sec)   p_kst 6.146199e-04   p_cons 9.644743e-01   p_joint 1.308070e-02

Joint ci ratio: 2.595833e-02	ci left: 1.291501e-02	ci right 1.325524e-02	k: 22505	n:1720000
Cons ci ratio: 5.737904e-04	ci left: 9.641804e-01	ci right 9.647343e-01	k: 1658868	n:1720000
KS ci ratio: 1.204216e-01	ci left: 5.786155e-04	ci right 6.533151e-04	k: 1058	n:1720000
ZNF844   1720000 perm   2231 sec   (771 perm/sec)   p_kst 6.151163e-04   p_cons 9.644581e-01   p_joint 1.308430e-02

Joint ci ratio: 2.587384e-02	ci left: 1.292478e-02	ci right 1.326414e-02	k: 22652	n:1730000
Cons ci ratio: 5.722241e-04	ci left: 9.641698e-01	ci right 9.647223e-01	k: 1668493	n:1730000
KS ci ratio: 1.200819e-01	ci left: 5.786348e-04	ci right 6.531112e-04	k: 1064	n:1730000
ZNF844   1730000 perm   2258 sec   (766 perm/sec)   p_kst 6.150289e-04   p_cons 9.644468e-01   p_joint 1.309364e-02

Joint ci ratio: 2.580337e-02	ci left: 1.292130e-02	ci right 1.325963e-02	k: 22776	n:1740000
Cons ci ratio: 5.706848e-04	ci left: 9.641577e-01	ci right 9.647086e-01	k: 1678115	n:1740000
KS ci ratio: 1.196891e-01	ci left: 5.792117e-04	ci right 6.535013e-04	k: 1071	n:1740000
ZNF844   1740000 perm   2279 sec   (763 perm/sec)   p_kst 6.155172e-04   p_cons 9.644339e-01   p_joint 1.308966e-02

Joint ci ratio: 2.572664e-02	ci left: 1.292468e-02	ci right 1.326208e-02	k: 22912	n:1750000
Cons ci ratio: 5.690819e-04	ci left: 9.641548e-01	ci right 9.647042e-01	k: 1687753	n:1750000
KS ci ratio: 1.193556e-01	ci left: 5.792280e-04	ci right 6.532980e-04	k: 1077	n:1750000
ZNF844   1750000 perm   2302 sec   (760 perm/sec)   p_kst 6.154286e-04   p_cons 9.644303e-01   p_joint 1.309257e-02

Joint ci ratio: 2.564890e-02	ci left: 1.292971e-02	ci right 1.326621e-02	k: 23051	n:1760000
Cons ci ratio: 5.676899e-04	ci left: 9.641281e-01	ci right 9.646761e-01	k: 1697349	n:1760000
KS ci ratio: 1.191900e-01	ci left: 5.775906e-04	ci right 6.513415e-04	k: 1080	n:1760000
ZNF844   1760000 perm   2328 sec   (756 perm/sec)   p_kst 6.136364e-04   p_cons 9.644028e-01   p_joint 1.309716e-02

Joint ci ratio: 2.557633e-02	ci left: 1.293020e-02	ci right 1.326575e-02	k: 23182	n:1770000
Cons ci ratio: 5.660840e-04	ci left: 9.641288e-01	ci right 9.646753e-01	k: 1706993	n:1770000
KS ci ratio: 1.189701e-01	ci left: 5.765199e-04	ci right 6.499888e-04	k: 1084	n:1770000
ZNF844   1770000 perm   2350 sec   (753 perm/sec)   p_kst 6.124294e-04   p_cons 9.644028e-01   p_joint 1.309718e-02

Joint ci ratio: 2.551269e-02	ci left: 1.292231e-02	ci right 1.325680e-02	k: 23298	n:1780000
Cons ci ratio: 5.645287e-04	ci left: 9.641251e-01	ci right 9.646700e-01	k: 1716629	n:1780000
KS ci ratio: 1.186970e-01	ci left: 5.760065e-04	ci right 6.492296e-04	k: 1089	n:1780000
ZNF844   1780000 perm   2375 sec   (749 perm/sec)   p_kst 6.117978e-04   p_cons 9.643983e-01   p_joint 1.308876e-02

Joint ci ratio: 2.544182e-02	ci left: 1.292228e-02	ci right 1.325583e-02	k: 23428	n:1790000
Cons ci ratio: 5.629953e-04	ci left: 9.641202e-01	ci right 9.646637e-01	k: 1726263	n:1790000
KS ci ratio: 1.185884e-01	ci left: 5.738727e-04	ci right 6.467532e-04	k: 1091	n:1790000
ZNF844   1790000 perm   2402 sec   (745 perm/sec)   p_kst 6.094972e-04   p_cons 9.643927e-01   p_joint 1.308827e-02

Joint ci ratio: 2.537153e-02	ci left: 1.292225e-02	ci right 1.325487e-02	k: 23558	n:1800000
Cons ci ratio: 5.614244e-04	ci left: 9.641216e-01	ci right 9.646636e-01	k: 1735908	n:1800000
KS ci ratio: 1.182639e-01	ci left: 5.739191e-04	ci right 6.465921e-04	k: 1097	n:1800000
ZNF844   1800000 perm   2427 sec   (742 perm/sec)   p_kst 6.094444e-04   p_cons 9.643933e-01   p_joint 1.308778e-02

Joint ci ratio: 2.529858e-02	ci left: 1.292552e-02	ci right 1.325725e-02	k: 23694	n:1810000
Cons ci ratio: 5.598755e-04	ci left: 9.641218e-01	ci right 9.646623e-01	k: 1745551	n:1810000
KS ci ratio: 1.179421e-01	ci left: 5.739653e-04	ci right 6.464326e-04	k: 1103	n:1810000
ZNF844   1810000 perm   2445 sec   (740 perm/sec)   p_kst 6.093923e-04   p_cons 9.643928e-01   p_joint 1.309061e-02

Joint ci ratio: 2.521768e-02	ci left: 1.293749e-02	ci right 1.326845e-02	k: 23846	n:1820000
Cons ci ratio: 5.585806e-04	ci left: 9.640923e-01	ci right 9.646315e-01	k: 1755140	n:1820000
KS ci ratio: 1.173587e-01	ci left: 5.766778e-04	ci right 6.491024e-04	k: 1114	n:1820000
ZNF844   1820000 perm   2462 sec   (739 perm/sec)   p_kst 6.120879e-04   p_cons 9.643626e-01   p_joint 1.310220e-02

Joint ci ratio: 2.514232e-02	ci left: 1.294445e-02	ci right 1.327458e-02	k: 23989	n:1830000
Cons ci ratio: 5.570861e-04	ci left: 9.640889e-01	ci right 9.646266e-01	k: 1764776	n:1830000
KS ci ratio: 1.170443e-01	ci left: 5.767091e-04	ci right 6.489302e-04	k: 1120	n:1830000
ZNF844   1830000 perm   2485 sec   (736 perm/sec)   p_kst 6.120219e-04   p_cons 9.643585e-01   p_joint 1.310874e-02

Joint ci ratio: 2.507027e-02	ci left: 1.294863e-02	ci right 1.327791e-02	k: 24127	n:1840000
Cons ci ratio: 5.556606e-04	ci left: 9.640784e-01	ci right 9.646147e-01	k: 1774399	n:1840000
KS ci ratio: 1.168361e-01	ci left: 5.756851e-04	ci right 6.476409e-04	k: 1124	n:1840000
ZNF844   1840000 perm   2513 sec   (732 perm/sec)   p_kst 6.108696e-04   p_cons 9.643473e-01   p_joint 1.311250e-02

Joint ci ratio: 2.499779e-02	ci left: 1.295384e-02	ci right 1.328228e-02	k: 24267	n:1850000
Cons ci ratio: 5.541849e-04	ci left: 9.640756e-01	ci right 9.646105e-01	k: 1784036	n:1850000
KS ci ratio: 1.164742e-01	ci left: 5.762467e-04	ci right 6.480343e-04	k: 1131	n:1850000
ZNF844   1850000 perm   2541 sec   (728 perm/sec)   p_kst 6.113514e-04   p_cons 9.643438e-01   p_joint 1.311730e-02

Joint ci ratio: 2.493318e-02	ci left: 1.295151e-02	ci right 1.327904e-02	k: 24393	n:1860000
Cons ci ratio: 5.526475e-04	ci left: 9.640820e-01	ci right 9.646155e-01	k: 1793690	n:1860000
KS ci ratio: 1.160139e-01	ci left: 5.778466e-04	ci right 6.495295e-04	k: 1140	n:1860000
ZNF844   1860000 perm   2561 sec   (726 perm/sec)   p_kst 6.129032e-04   p_cons 9.643495e-01   p_joint 1.311452e-02

Joint ci ratio: 2.487267e-02	ci left: 1.294549e-02	ci right 1.327206e-02	k: 24512	n:1870000
Cons ci ratio: 5.511442e-04	ci left: 9.640857e-01	ci right 9.646177e-01	k: 1803339	n:1870000
KS ci ratio: 1.157100e-01	ci left: 5.778721e-04	ci right 6.493576e-04	k: 1146	n:1870000
ZNF844   1870000 perm   2580 sec   (725 perm/sec)   p_kst 6.128342e-04   p_cons 9.643524e-01   p_joint 1.310802e-02

Joint ci ratio: 2.481107e-02	ci left: 1.294112e-02	ci right 1.326676e-02	k: 24634	n:1880000
Cons ci ratio: 5.496787e-04	ci left: 9.640861e-01	ci right 9.646167e-01	k: 1812982	n:1880000
KS ci ratio: 1.152586e-01	ci left: 5.794473e-04	ci right 6.508290e-04	k: 1155	n:1880000
ZNF844   1880000 perm   2610 sec   (720 perm/sec)   p_kst 6.143617e-04   p_cons 9.643521e-01   p_joint 1.310319e-02

Joint ci ratio: 2.474890e-02	ci left: 1.293785e-02	ci right 1.326258e-02	k: 24758	n:1890000
Cons ci ratio: 5.481530e-04	ci left: 9.640956e-01	ci right 9.646247e-01	k: 1822642	n:1890000
KS ci ratio: 1.150102e-01	ci left: 5.789508e-04	ci right 6.501071e-04	k: 1160	n:1890000
ZNF844   1890000 perm   2639 sec   (716 perm/sec)   p_kst 6.137566e-04   p_cons 9.643608e-01   p_joint 1.309947e-02

Joint ci ratio: 2.467716e-02	ci left: 1.294508e-02	ci right 1.326904e-02	k: 24902	n:1900000
Cons ci ratio: 5.467363e-04	ci left: 9.640928e-01	ci right 9.646205e-01	k: 1832279	n:1900000
KS ci ratio: 1.147634e-01	ci left: 5.784596e-04	ci right 6.493927e-04	k: 1165	n:1900000
ZNF844   1900000 perm   2663 sec   (714 perm/sec)   p_kst 6.131579e-04   p_cons 9.643574e-01   p_joint 1.310632e-02

Joint ci ratio: 2.462148e-02	ci left: 1.293610e-02	ci right 1.325909e-02	k: 25015	n:1910000
Cons ci ratio: 5.454301e-04	ci left: 9.640774e-01	ci right 9.646039e-01	k: 1841892	n:1910000
KS ci ratio: 1.145671e-01	ci left: 5.774652e-04	ci right 6.481470e-04	k: 1169	n:1910000
ZNF844   1910000 perm   2684 sec   (712 perm/sec)   p_kst 6.120419e-04   p_cons 9.643414e-01   p_joint 1.309686e-02

Joint ci ratio: 2.456321e-02	ci left: 1.293033e-02	ci right 1.325240e-02	k: 25134	n:1920000
Cons ci ratio: 5.440713e-04	ci left: 9.640700e-01	ci right 9.645952e-01	k: 1851520	n:1920000
KS ci ratio: 1.143718e-01	ci left: 5.764812e-04	ci right 6.469142e-04	k: 1173	n:1920000
ZNF844   1920000 perm   2704 sec   (710 perm/sec)   p_kst 6.109375e-04   p_cons 9.643333e-01   p_joint 1.309062e-02

Joint ci ratio: 2.449453e-02	ci left: 1.293594e-02	ci right 1.325724e-02	k: 25275	n:1930000
Cons ci ratio: 5.427063e-04	ci left: 9.640648e-01	ci right 9.645887e-01	k: 1861152	n:1930000
KS ci ratio: 1.139359e-01	ci left: 5.780244e-04	ci right 6.483586e-04	k: 1182	n:1930000
ZNF844   1930000 perm   2732 sec   (706 perm/sec)   p_kst 6.124352e-04   p_cons 9.643275e-01   p_joint 1.309585e-02

Joint ci ratio: 2.442400e-02	ci left: 1.294406e-02	ci right 1.326462e-02	k: 25421	n:1940000
Cons ci ratio: 5.412095e-04	ci left: 9.640778e-01	ci right 9.646002e-01	k: 1870819	n:1940000
KS ci ratio: 1.135048e-01	ci left: 5.795521e-04	ci right 6.497876e-04	k: 1191	n:1940000
ZNF844   1940000 perm   2757 sec   (704 perm/sec)   p_kst 6.139175e-04   p_cons 9.643397e-01   p_joint 1.310361e-02

Joint ci ratio: 2.436131e-02	ci left: 1.294445e-02	ci right 1.326418e-02	k: 25552	n:1950000
Cons ci ratio: 5.398256e-04	ci left: 9.640777e-01	ci right 9.645988e-01	k: 1880461	n:1950000
KS ci ratio: 1.131730e-01	ci left: 5.800680e-04	ci right 6.501468e-04	k: 1198	n:1950000
ZNF844   1950000 perm   2776 sec   (702 perm/sec)   p_kst 6.143590e-04   p_cons 9.643390e-01   p_joint 1.310359e-02

Joint ci ratio: 2.430007e-02	ci left: 1.294382e-02	ci right 1.326272e-02	k: 25681	n:1960000
Cons ci ratio: 5.383844e-04	ci left: 9.640864e-01	ci right 9.646061e-01	k: 1890120	n:1960000
KS ci ratio: 1.128440e-01	ci left: 5.805790e-04	ci right 6.505021e-04	k: 1205	n:1960000
ZNF844   1960000 perm   2802 sec   (700 perm/sec)   p_kst 6.147959e-04   p_cons 9.643469e-01   p_joint 1.310255e-02

Joint ci ratio: 2.424356e-02	ci left: 1.293866e-02	ci right 1.325668e-02	k: 25801	n:1970000
Cons ci ratio: 5.369942e-04	ci left: 9.640899e-01	ci right 9.646082e-01	k: 1899769	n:1970000
KS ci ratio: 1.126574e-01	ci left: 5.796051e-04	ci right 6.492877e-04	k: 1209	n:1970000
ZNF844   1970000 perm   2820 sec   (699 perm/sec)   p_kst 6.137056e-04   p_cons 9.643497e-01   p_joint 1.309695e-02

Joint ci ratio: 2.418367e-02	ci left: 1.293757e-02	ci right 1.325477e-02	k: 25929	n:1980000
Cons ci ratio: 5.355558e-04	ci left: 9.641009e-01	ci right 9.646179e-01	k: 1909433	n:1980000
KS ci ratio: 1.125181e-01	ci left: 5.781502e-04	ci right 6.475663e-04	k: 1212	n:1980000
ZNF844   1980000 perm   2840 sec   (697 perm/sec)   p_kst 6.121212e-04   p_cons 9.643601e-01   p_joint 1.309545e-02

Joint ci ratio: 2.412469e-02	ci left: 1.293599e-02	ci right 1.325237e-02	k: 26056	n:1990000
Cons ci ratio: 5.341249e-04	ci left: 9.641124e-01	ci right 9.646280e-01	k: 1919098	n:1990000
KS ci ratio: 1.122870e-01	ci left: 5.776869e-04	ci right 6.468954e-04	k: 1217	n:1990000
ZNF844   1990000 perm   2864 sec   (695 perm/sec)   p_kst 6.115578e-04   p_cons 9.643709e-01   p_joint 1.309347e-02

Joint ci ratio: 2.405962e-02	ci left: 1.294138e-02	ci right 1.325703e-02	k: 26197	n:2000000
Cons ci ratio: 5.328100e-04	ci left: 9.641102e-01	ci right 9.646245e-01	k: 1928736	n:2000000
KS ci ratio: 1.121031e-01	ci left: 5.767423e-04	ci right 6.457171e-04	k: 1221	n:2000000
ZNF844   2000000 perm   2888 sec   (692 perm/sec)   p_kst 6.105000e-04   p_cons 9.643680e-01   p_joint 1.309850e-02

Joint ci ratio: 2.399553e-02	ci left: 1.294623e-02	ci right 1.326114e-02	k: 26337	n:2010000
Cons ci ratio: 5.314317e-04	ci left: 9.641175e-01	ci right 9.646304e-01	k: 1938393	n:2010000
KS ci ratio: 1.116018e-01	ci left: 5.791925e-04	ci right 6.481302e-04	k: 1232	n:2010000
ZNF844   2010000 perm   2911 sec   (691 perm/sec)   p_kst 6.129353e-04   p_cons 9.643746e-01   p_joint 1.310299e-02

Joint ci ratio: 2.393150e-02	ci left: 1.295153e-02	ci right 1.326571e-02	k: 26478	n:2020000
Cons ci ratio: 5.301251e-04	ci left: 9.641167e-01	ci right 9.646285e-01	k: 1948034	n:2020000
KS ci ratio: 1.111071e-01	ci left: 5.816191e-04	ci right 6.505187e-04	k: 1243	n:2020000
ZNF844   2020000 perm   2935 sec   (688 perm/sec)   p_kst 6.153465e-04   p_cons 9.643733e-01   p_joint 1.310792e-02

Joint ci ratio: 2.387479e-02	ci left: 1.294942e-02	ci right 1.326281e-02	k: 26604	n:2030000
Cons ci ratio: 5.288281e-04	ci left: 9.641160e-01	ci right 9.646265e-01	k: 1957675	n:2030000
KS ci ratio: 1.106631e-01	ci left: 5.835435e-04	ci right 6.523768e-04	k: 1253	n:2030000
ZNF844   2030000 perm   2960 sec   (686 perm/sec)   p_kst 6.172414e-04   p_cons 9.643719e-01   p_joint 1.310542e-02

Joint ci ratio: 2.382075e-02	ci left: 1.294490e-02	ci right 1.325746e-02	k: 26725	n:2040000
Cons ci ratio: 5.275030e-04	ci left: 9.641202e-01	ci right 9.646294e-01	k: 1967326	n:2040000
KS ci ratio: 1.104432e-01	ci left: 5.830662e-04	ci right 6.516976e-04	k: 1258	n:2040000
ZNF844   2040000 perm   2984 sec   (684 perm/sec)   p_kst 6.166667e-04   p_cons 9.643755e-01   p_joint 1.310049e-02

Joint ci ratio: 2.376886e-02	ci left: 1.293849e-02	ci right 1.325020e-02	k: 26842	n:2050000
Cons ci ratio: 5.263259e-04	ci left: 9.641063e-01	ci right 9.646143e-01	k: 1976940	n:2050000
KS ci ratio: 1.102682e-01	ci left: 5.821193e-04	ci right 6.505237e-04	k: 1262	n:2050000
ZNF844   2050000 perm   3007 sec   (682 perm/sec)   p_kst 6.156098e-04   p_cons 9.643610e-01   p_joint 1.309366e-02

Joint ci ratio: 2.370617e-02	ci left: 1.294421e-02	ci right 1.325522e-02	k: 26984	n:2060000
Cons ci ratio: 5.250677e-04	ci left: 9.641042e-01	ci right 9.646110e-01	k: 1986578	n:2060000
KS ci ratio: 1.097910e-01	ci left: 5.844864e-04	ci right 6.528525e-04	k: 1273	n:2060000
ZNF844   2060000 perm   3029 sec   (680 perm/sec)   p_kst 6.179612e-04   p_cons 9.643583e-01   p_joint 1.309903e-02

Joint ci ratio: 2.364531e-02	ci left: 1.294843e-02	ci right 1.325873e-02	k: 27123	n:2070000
Cons ci ratio: 5.238699e-04	ci left: 9.640953e-01	ci right 9.646010e-01	k: 1996202	n:2070000
KS ci ratio: 1.095334e-01	ci left: 5.844818e-04	ci right 6.526766e-04	k: 1279	n:2070000
ZNF844   2070000 perm   3053 sec   (678 perm/sec)   p_kst 6.178744e-04   p_cons 9.643488e-01   p_joint 1.310290e-02

Joint ci ratio: 2.358885e-02	ci left: 1.294831e-02	ci right 1.325786e-02	k: 27253	n:2080000
Cons ci ratio: 5.228118e-04	ci left: 9.640692e-01	ci right 9.645738e-01	k: 2005790	n:2080000
KS ci ratio: 1.092351e-01	ci left: 5.849452e-04	ci right 6.529962e-04	k: 1286	n:2080000
ZNF844   2080000 perm   3077 sec   (676 perm/sec)   p_kst 6.182692e-04   p_cons 9.643221e-01   p_joint 1.310240e-02

Joint ci ratio: 2.353106e-02	ci left: 1.295009e-02	ci right 1.325892e-02	k: 27387	n:2090000
Cons ci ratio: 5.215567e-04	ci left: 9.640701e-01	ci right 9.645736e-01	k: 2015434	n:2090000
KS ci ratio: 1.090236e-01	ci left: 5.844734e-04	ci right 6.523294e-04	k: 1291	n:2090000
ZNF844   2090000 perm   3100 sec   (674 perm/sec)   p_kst 6.177033e-04   p_cons 9.643225e-01   p_joint 1.310383e-02

Joint ci ratio: 2.347109e-02	ci left: 1.295470e-02	ci right 1.326284e-02	k: 27527	n:2100000
Cons ci ratio: 5.203214e-04	ci left: 9.640697e-01	ci right 9.645719e-01	k: 2025075	n:2100000
KS ci ratio: 1.088133e-01	ci left: 5.840063e-04	ci right 6.516689e-04	k: 1296	n:2100000
ZNF844   2100000 perm   3128 sec   (671 perm/sec)   p_kst 6.171429e-04   p_cons 9.643214e-01   p_joint 1.310810e-02

Joint ci ratio: 2.341416e-02	ci left: 1.295644e-02	ci right 1.326386e-02	k: 27661	n:2110000
Cons ci ratio: 5.190127e-04	ci left: 9.640802e-01	ci right 9.645811e-01	k: 2034739	n:2110000
KS ci ratio: 1.084792e-01	ci left: 5.849269e-04	ci right 6.524748e-04	k: 1304	n:2110000
ZNF844   2110000 perm   3157 sec   (668 perm/sec)   p_kst 6.180095e-04   p_cons 9.643313e-01   p_joint 1.310948e-02

Joint ci ratio: 2.336062e-02	ci left: 1.295488e-02	ci right 1.326155e-02	k: 27788	n:2120000
Cons ci ratio: 5.178237e-04	ci left: 9.640759e-01	ci right 9.645757e-01	k: 2044372	n:2120000
KS ci ratio: 1.083548e-01	ci left: 5.835446e-04	ci right 6.508506e-04	k: 1307	n:2120000
ZNF844   2120000 perm   3185 sec   (666 perm/sec)   p_kst 6.165094e-04   p_cons 9.643264e-01   p_joint 1.310755e-02

Joint ci ratio: 2.330744e-02	ci left: 1.295333e-02	ci right 1.325926e-02	k: 27915	n:2130000
Cons ci ratio: 5.166429e-04	ci left: 9.640716e-01	ci right 9.645703e-01	k: 2054005	n:2130000
KS ci ratio: 1.081071e-01	ci left: 5.835456e-04	ci right 6.506881e-04	k: 1313	n:2130000
ZNF844   2130000 perm   3217 sec   (662 perm/sec)   p_kst 6.164319e-04   p_cons 9.643216e-01   p_joint 1.310563e-02

Joint ci ratio: 2.325967e-02	ci left: 1.294623e-02	ci right 1.325135e-02	k: 28030	n:2140000
Cons ci ratio: 5.154001e-04	ci left: 9.640768e-01	ci right 9.645743e-01	k: 2063658	n:2140000
KS ci ratio: 1.079020e-01	ci left: 5.830920e-04	ci right 6.500470e-04	k: 1318	n:2140000
ZNF844   2140000 perm   3247 sec   (659 perm/sec)   p_kst 6.158879e-04   p_cons 9.643262e-01   p_joint 1.309813e-02

Joint ci ratio: 2.320551e-02	ci left: 1.294659e-02	ci right 1.325100e-02	k: 28161	n:2150000
Cons ci ratio: 5.142636e-04	ci left: 9.640689e-01	ci right 9.645652e-01	k: 2073283	n:2150000
KS ci ratio: 1.077796e-01	ci left: 5.817377e-04	ci right 6.484566e-04	k: 1321	n:2150000
ZNF844   2150000 perm   3279 sec   (656 perm/sec)   p_kst 6.144186e-04   p_cons 9.643177e-01   p_joint 1.309814e-02

Joint ci ratio: 2.315587e-02	ci left: 1.294234e-02	ci right 1.324600e-02	k: 28282	n:2160000
Cons ci ratio: 5.131621e-04	ci left: 9.640573e-01	ci right 9.645526e-01	k: 2082900	n:2160000
KS ci ratio: 1.076983e-01	ci left: 5.799454e-04	ci right 6.464053e-04	k: 1323	n:2160000
ZNF844   2160000 perm   3306 sec   (653 perm/sec)   p_kst 6.125000e-04   p_cons 9.643056e-01   p_joint 1.309352e-02

Joint ci ratio: 2.310490e-02	ci left: 1.293997e-02	ci right 1.324290e-02	k: 28407	n:2170000
Cons ci ratio: 5.120779e-04	ci left: 9.640444e-01	ci right 9.645387e-01	k: 2092514	n:2170000
KS ci ratio: 1.072938e-01	ci left: 5.817573e-04	ci right 6.481586e-04	k: 1333	n:2170000
ZNF844   2170000 perm   3326 sec   (653 perm/sec)   p_kst 6.142857e-04   p_cons 9.642922e-01   p_joint 1.309078e-02

Joint ci ratio: 2.304772e-02	ci left: 1.294492e-02	ci right 1.324720e-02	k: 28548	n:2180000
Cons ci ratio: 5.108916e-04	ci left: 9.640464e-01	ci right 9.645395e-01	k: 2102160	n:2180000
KS ci ratio: 1.070533e-01	ci left: 5.817672e-04	ci right 6.480115e-04	k: 1339	n:2180000
ZNF844   2180000 perm   3345 sec   (652 perm/sec)   p_kst 6.142202e-04   p_cons 9.642936e-01   p_joint 1.309541e-02

Joint ci ratio: 2.298650e-02	ci left: 1.295482e-02	ci right 1.325652e-02	k: 28700	n:2190000
Cons ci ratio: 5.098148e-04	ci left: 9.640346e-01	ci right 9.645267e-01	k: 2111776	n:2190000
KS ci ratio: 1.068542e-01	ci left: 5.813327e-04	ci right 6.473967e-04	k: 1344	n:2190000
ZNF844   2190000 perm   3368 sec   (650 perm/sec)   p_kst 6.136986e-04   p_cons 9.642813e-01   p_joint 1.310502e-02

Joint ci ratio: 2.293059e-02	ci left: 1.295921e-02	ci right 1.326026e-02	k: 28840	n:2200000
Cons ci ratio: 5.086005e-04	ci left: 9.640426e-01	ci right 9.645335e-01	k: 2121435	n:2200000
KS ci ratio: 1.067353e-01	ci left: 5.800175e-04	ci right 6.458540e-04	k: 1347	n:2200000
ZNF844   2200000 perm   3388 sec   (649 perm/sec)   p_kst 6.122727e-04   p_cons 9.642886e-01   p_joint 1.310909e-02

Joint ci ratio: 2.288109e-02	ci left: 1.295680e-02	ci right 1.325714e-02	k: 28965	n:2210000
Cons ci ratio: 5.075515e-04	ci left: 9.640291e-01	ci right 9.645190e-01	k: 2131047	n:2210000
KS ci ratio: 1.065773e-01	ci left: 5.791546e-04	ci right 6.447898e-04	k: 1351	n:2210000
ZNF844   2210000 perm   3413 sec   (648 perm/sec)   p_kst 6.113122e-04   p_cons 9.642747e-01   p_joint 1.310633e-02

Joint ci ratio: 2.283589e-02	ci left: 1.294994e-02	ci right 1.324953e-02	k: 29080	n:2220000
Cons ci ratio: 5.064227e-04	ci left: 9.640275e-01	ci right 9.645163e-01	k: 2140685	n:2220000
KS ci ratio: 1.064593e-01	ci left: 5.778612e-04	ci right 6.432728e-04	k: 1354	n:2220000
ZNF844   2220000 perm   3433 sec   (647 perm/sec)   p_kst 6.099099e-04   p_cons 9.642725e-01   p_joint 1.309910e-02

Joint ci ratio: 2.278108e-02	ci left: 1.295430e-02	ci right 1.325325e-02	k: 29220	n:2230000
Cons ci ratio: 5.052555e-04	ci left: 9.640323e-01	ci right 9.645199e-01	k: 2150337	n:2230000
KS ci ratio: 1.063418e-01	ci left: 5.765793e-04	ci right 6.417692e-04	k: 1357	n:2230000
ZNF844   2230000 perm   3457 sec   (645 perm/sec)   p_kst 6.085202e-04   p_cons 9.642767e-01   p_joint 1.310314e-02

Joint ci ratio: 2.273097e-02	ci left: 1.295373e-02	ci right 1.325200e-02	k: 29349	n:2240000
Cons ci ratio: 5.041289e-04	ci left: 9.640325e-01	ci right 9.645190e-01	k: 2159979	n:2240000
KS ci ratio: 1.062636e-01	ci left: 5.748744e-04	ci right 6.398208e-04	k: 1359	n:2240000
ZNF844   2240000 perm   3477 sec   (644 perm/sec)   p_kst 6.066964e-04   p_cons 9.642763e-01   p_joint 1.310223e-02

Joint ci ratio: 2.267417e-02	ci left: 1.296112e-02	ci right 1.325881e-02	k: 29496	n:2250000
Cons ci ratio: 5.030747e-04	ci left: 9.640237e-01	ci right 9.645093e-01	k: 2169601	n:2250000
KS ci ratio: 1.060300e-01	ci left: 5.749153e-04	ci right 6.397146e-04	k: 1365	n:2250000
ZNF844   2250000 perm   3499 sec   (643 perm/sec)   p_kst 6.066667e-04   p_cons 9.642671e-01   p_joint 1.310933e-02

Joint ci ratio: 2.262747e-02	ci left: 1.295744e-02	ci right 1.325443e-02	k: 29618	n:2260000
Cons ci ratio: 5.019143e-04	ci left: 9.640306e-01	ci right 9.645151e-01	k: 2179258	n:2260000
KS ci ratio: 1.057208e-01	ci left: 5.758175e-04	ci right 6.405175e-04	k: 1373	n:2260000
ZNF844   2260000 perm   3521 sec   (642 perm/sec)   p_kst 6.075221e-04   p_cons 9.642735e-01   p_joint 1.310531e-02

Joint ci ratio: 2.257837e-02	ci left: 1.295687e-02	ci right 1.325319e-02	k: 29747	n:2270000
Cons ci ratio: 5.007587e-04	ci left: 9.640379e-01	ci right 9.645212e-01	k: 2188916	n:2270000
KS ci ratio: 1.054525e-01	ci left: 5.762831e-04	ci right 6.408609e-04	k: 1380	n:2270000
ZNF844   2270000 perm   3547 sec   (640 perm/sec)   p_kst 6.079295e-04   p_cons 9.642802e-01   p_joint 1.310441e-02

Joint ci ratio: 2.252615e-02	ci left: 1.296023e-02	ci right 1.325593e-02	k: 29885	n:2280000
Cons ci ratio: 4.995791e-04	ci left: 9.640496e-01	ci right 9.645317e-01	k: 2198584	n:2280000
KS ci ratio: 1.050727e-01	ci left: 5.780261e-04	ci right 6.425515e-04	k: 1390	n:2280000
ZNF844   2280000 perm   3579 sec   (637 perm/sec)   p_kst 6.096491e-04   p_cons 9.642912e-01   p_joint 1.310746e-02

Joint ci ratio: 2.247732e-02	ci left: 1.296008e-02	ci right 1.325513e-02	k: 30015	n:2290000
Cons ci ratio: 4.984458e-04	ci left: 9.640558e-01	ci right 9.645369e-01	k: 2208240	n:2290000
KS ci ratio: 1.048468e-01	ci left: 5.780533e-04	ci right 6.424344e-04	k: 1396	n:2290000
ZNF844   2290000 perm   3608 sec   (635 perm/sec)   p_kst 6.096070e-04   p_cons 9.642969e-01   p_joint 1.310699e-02

Joint ci ratio: 2.243258e-02	ci left: 1.295561e-02	ci right 1.324996e-02	k: 30135	n:2300000
Cons ci ratio: 4.973326e-04	ci left: 9.640603e-01	ci right 9.645403e-01	k: 2217892	n:2300000
KS ci ratio: 1.045479e-01	ci left: 5.789272e-04	ci right 6.432105e-04	k: 1404	n:2300000
ZNF844   2300000 perm   3631 sec   (633 perm/sec)   p_kst 6.104348e-04   p_cons 9.643009e-01   p_joint 1.310217e-02

Joint ci ratio: 2.238360e-02	ci left: 1.295635e-02	ci right 1.325007e-02	k: 30267	n:2310000
Cons ci ratio: 4.963143e-04	ci left: 9.640526e-01	ci right 9.645316e-01	k: 2227516	n:2310000
KS ci ratio: 1.041409e-01	ci left: 5.810587e-04	ci right 6.453122e-04	k: 1415	n:2310000
ZNF844   2310000 perm   3652 sec   (632 perm/sec)   p_kst 6.125541e-04   p_cons 9.642926e-01   p_joint 1.310260e-02

Joint ci ratio: 2.233272e-02	ci left: 1.295965e-02	ci right 1.325277e-02	k: 30405	n:2320000
Cons ci ratio: 4.951874e-04	ci left: 9.640609e-01	ci right 9.645388e-01	k: 2237177	n:2320000
KS ci ratio: 1.039575e-01	ci left: 5.806532e-04	ci right 6.447419e-04	k: 1420	n:2320000
ZNF844   2320000 perm   3673 sec   (632 perm/sec)   p_kst 6.120690e-04   p_cons 9.643004e-01   p_joint 1.310560e-02

Joint ci ratio: 2.228070e-02	ci left: 1.296464e-02	ci right 1.325717e-02	k: 30547	n:2330000
Cons ci ratio: 4.941729e-04	ci left: 9.640545e-01	ci right 9.645315e-01	k: 2246804	n:2330000
KS ci ratio: 1.037024e-01	ci left: 5.810874e-04	ci right 6.450570e-04	k: 1427	n:2330000
ZNF844   2330000 perm   3694 sec   (631 perm/sec)   p_kst 6.124464e-04   p_cons 9.642936e-01   p_joint 1.311030e-02

Joint ci ratio: 2.223859e-02	ci left: 1.295853e-02	ci right 1.325037e-02	k: 30663	n:2340000
Cons ci ratio: 4.932197e-04	ci left: 9.640405e-01	ci right 9.645165e-01	k: 2256413	n:2340000
KS ci ratio: 1.036299e-01	ci left: 5.794367e-04	ci right 6.431773e-04	k: 1429	n:2340000
ZNF844   2340000 perm   3721 sec   (629 perm/sec)   p_kst 6.106838e-04   p_cons 9.642791e-01   p_joint 1.310385e-02

Joint ci ratio: 2.218832e-02	ci left: 1.296221e-02	ci right 1.325346e-02	k: 30802	n:2350000
Cons ci ratio: 4.921716e-04	ci left: 9.640406e-01	ci right 9.645157e-01	k: 2266055	n:2350000
KS ci ratio: 1.033053e-01	ci left: 5.807017e-04	ci right 6.443692e-04	k: 1438	n:2350000
ZNF844   2350000 perm   3746 sec   (627 perm/sec)   p_kst 6.119149e-04   p_cons 9.642787e-01   p_joint 1.310723e-02

Joint ci ratio: 2.214020e-02	ci left: 1.296375e-02	ci right 1.325440e-02	k: 30936	n:2360000
Cons ci ratio: 4.910878e-04	ci left: 9.640468e-01	ci right 9.645207e-01	k: 2275711	n:2360000
KS ci ratio: 1.030193e-01	ci left: 5.815435e-04	ci right 6.451160e-04	k: 1446	n:2360000
ZNF844   2360000 perm   3769 sec   (626 perm/sec)   p_kst 6.127119e-04   p_cons 9.642843e-01   p_joint 1.310847e-02

Joint ci ratio: 2.208699e-02	ci left: 1.297157e-02	ci right 1.326169e-02	k: 31085	n:2370000
Cons ci ratio: 4.899661e-04	ci left: 9.640592e-01	ci right 9.645321e-01	k: 2285382	n:2370000
KS ci ratio: 1.027356e-01	ci left: 5.823784e-04	ci right 6.458564e-04	k: 1454	n:2370000
ZNF844   2370000 perm   3791 sec   (625 perm/sec)   p_kst 6.135021e-04   p_cons 9.642962e-01   p_joint 1.311603e-02

Joint ci ratio: 2.204382e-02	ci left: 1.296805e-02	ci right 1.325751e-02	k: 31207	n:2380000
Cons ci ratio: 4.888819e-04	ci left: 9.640673e-01	ci right 9.645391e-01	k: 2295043	n:2380000
KS ci ratio: 1.025596e-01	ci left: 5.819783e-04	ci right 6.452975e-04	k: 1459	n:2380000
ZNF844   2380000 perm   3818 sec   (623 perm/sec)   p_kst 6.130252e-04   p_cons 9.643038e-01   p_joint 1.311218e-02

Joint ci ratio: 2.199628e-02	ci left: 1.296996e-02	ci right 1.325884e-02	k: 31342	n:2390000
Cons ci ratio: 4.877870e-04	ci left: 9.640779e-01	ci right 9.645486e-01	k: 2304710	n:2390000
KS ci ratio: 1.024194e-01	ci left: 5.811740e-04	ci right 6.443140e-04	k: 1463	n:2390000
ZNF844   2390000 perm   3849 sec   (621 perm/sec)   p_kst 6.121339e-04   p_cons 9.643138e-01   p_joint 1.311381e-02

Joint ci ratio: 2.194586e-02	ci left: 1.297559e-02	ci right 1.326392e-02	k: 31486	n:2400000
Cons ci ratio: 4.868202e-04	ci left: 9.640712e-01	ci right 9.645410e-01	k: 2314336	n:2400000
KS ci ratio: 1.023496e-01	ci left: 5.795644e-04	ci right 6.424841e-04	k: 1465	n:2400000
ZNF844   2400000 perm   3884 sec   (618 perm/sec)   p_kst 6.104167e-04   p_cons 9.643067e-01   p_joint 1.311917e-02

Joint ci ratio: 2.189579e-02	ci left: 1.298117e-02	ci right 1.326896e-02	k: 31630	n:2410000
Cons ci ratio: 4.858825e-04	ci left: 9.640612e-01	ci right 9.645302e-01	k: 2323954	n:2410000
KS ci ratio: 1.022103e-01	ci left: 5.787768e-04	ci right 6.415204e-04	k: 1469	n:2410000
ZNF844   2410000 perm   3920 sec   (615 perm/sec)   p_kst 6.095436e-04   p_cons 9.642963e-01   p_joint 1.312448e-02

Joint ci ratio: 2.185338e-02	ci left: 1.297808e-02	ci right 1.326523e-02	k: 31753	n:2420000
Cons ci ratio: 4.849066e-04	ci left: 9.640576e-01	ci right 9.645256e-01	k: 2333587	n:2420000
KS ci ratio: 1.020024e-01	ci left: 5.788012e-04	ci right 6.414121e-04	k: 1475	n:2420000
ZNF844   2420000 perm   3952 sec   (612 perm/sec)   p_kst 6.095041e-04   p_cons 9.642921e-01   p_joint 1.312107e-02

Joint ci ratio: 2.181191e-02	ci left: 1.297420e-02	ci right 1.326071e-02	k: 31874	n:2430000
Cons ci ratio: 4.838989e-04	ci left: 9.640594e-01	ci right 9.645264e-01	k: 2343233	n:2430000
KS ci ratio: 1.016928e-01	ci left: 5.800287e-04	ci right 6.425705e-04	k: 1484	n:2430000
ZNF844   2430000 perm   3981 sec   (610 perm/sec)   p_kst 6.106996e-04   p_cons 9.642934e-01   p_joint 1.311687e-02

Joint ci ratio: 2.176481e-02	ci left: 1.297727e-02	ci right 1.326323e-02	k: 32012	n:2440000
Cons ci ratio: 4.829204e-04	ci left: 9.640578e-01	ci right 9.645239e-01	k: 2352871	n:2440000
KS ci ratio: 1.013181e-01	ci left: 5.820453e-04	ci right 6.445596e-04	k: 1495	n:2440000
ZNF844   2440000 perm   4015 sec   (608 perm/sec)   p_kst 6.127049e-04   p_cons 9.642914e-01   p_joint 1.311967e-02

Joint ci ratio: 2.171939e-02	ci left: 1.297870e-02	ci right 1.326409e-02	k: 32146	n:2450000
Cons ci ratio: 4.819679e-04	ci left: 9.640534e-01	ci right 9.645186e-01	k: 2362502	n:2450000
KS ci ratio: 1.010819e-01	ci left: 5.824545e-04	ci right 6.448582e-04	k: 1502	n:2450000
ZNF844   2450000 perm   4045 sec   (606 perm/sec)   p_kst 6.130612e-04   p_cons 9.642865e-01   p_joint 1.312082e-02

Joint ci ratio: 2.167187e-02	ci left: 1.298295e-02	ci right 1.326779e-02	k: 32287	n:2460000
Cons ci ratio: 4.809074e-04	ci left: 9.640654e-01	ci right 9.645295e-01	k: 2372173	n:2460000
KS ci ratio: 1.008473e-01	ci left: 5.828604e-04	ci right 6.451541e-04	k: 1509	n:2460000
ZNF844   2460000 perm   4078 sec   (603 perm/sec)   p_kst 6.134146e-04   p_cons 9.642980e-01   p_joint 1.312480e-02

Joint ci ratio: 2.163007e-02	ci left: 1.298072e-02	ci right 1.326496e-02	k: 32412	n:2470000
Cons ci ratio: 4.799018e-04	ci left: 9.640703e-01	ci right 9.645335e-01	k: 2381827	n:2470000
KS ci ratio: 1.006475e-01	ci left: 5.828686e-04	ci right 6.450325e-04	k: 1515	n:2470000
ZNF844   2470000 perm   4114 sec   (600 perm/sec)   p_kst 6.133603e-04   p_cons 9.643024e-01   p_joint 1.312227e-02

Joint ci ratio: 2.159154e-02	ci left: 1.297490e-02	ci right 1.325850e-02	k: 32528	n:2480000
Cons ci ratio: 4.789221e-04	ci left: 9.640724e-01	ci right 9.645346e-01	k: 2391474	n:2480000
KS ci ratio: 1.003830e-01	ci left: 5.836631e-04	ci right 6.457384e-04	k: 1523	n:2480000
ZNF844   2480000 perm   4140 sec   (599 perm/sec)   p_kst 6.141129e-04   p_cons 9.643040e-01   p_joint 1.311613e-02

Joint ci ratio: 2.154552e-02	ci left: 1.297831e-02	ci right 1.326138e-02	k: 32667	n:2490000
Cons ci ratio: 4.779652e-04	ci left: 9.640720e-01	ci right 9.645333e-01	k: 2401115	n:2490000
KS ci ratio: 1.000552e-01	ci left: 5.852345e-04	ci right 6.472618e-04	k: 1533	n:2490000
ZNF844   2490000 perm   4164 sec   (598 perm/sec)   p_kst 6.156627e-04   p_cons 9.643032e-01   p_joint 1.311928e-02

Joint ci ratio: 2.150278e-02	ci left: 1.297812e-02	ci right 1.326061e-02	k: 32797	n:2500000
Cons ci ratio: 4.769890e-04	ci left: 9.640753e-01	ci right 9.645356e-01	k: 2410765	n:2500000
KS ci ratio: 9.989252e-02	ci left: 5.848435e-04	ci right 6.467227e-04	k: 1538	n:2500000
ZNF844   2500000 perm   4197 sec   (596 perm/sec)   p_kst 6.152000e-04   p_cons 9.643060e-01   p_joint 1.311880e-02

Outputting figure to mutsig2_images.part000000000200/ZNF844.2_2017_2500000_0.0006152_0.96431_0.013119.png
                gene_name: ZNF844
               theta_stop: 0.100 
                    nperm: 2500000 
                     p_ks: 0.00062 
        ci_ks_bounds_left: 0.00058 
       ci_ks_bounds_right: 0.00065 
                   p_cons: 0.96 
      ci_cons_bounds_left: 0.96 
     ci_cons_bounds_right: 0.96 
                  p_joint: 0.013 
     ci_joint_bounds_left: 0.013 
    ci_joint_bounds_right: 0.013 

Current progress: 75 percent done.
ZSCAN20
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.933363e-02	ci left: 6.315079e-01	ci right 6.504099e-01	k: 6410	n:10000
KS ci ratio: 1.650805e-02	ci left: 8.422384e-01	ci right 8.563575e-01	k: 8494	n:10000
ZSCAN20   10000 perm   3 sec   (3451 perm/sec)   p_kst 8.494000e-01   p_cons 6.410000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000200/ZSCAN20.2_3160_10000_0.8494_0.641_1.png
                gene_name: ZSCAN20
               theta_stop: 0.029 
                    nperm: 10000 
                     p_ks: 0.85 
        ci_ks_bounds_left: 0.84 
       ci_ks_bounds_right: 0.86 
                   p_cons: 0.64 
      ci_cons_bounds_left: 0.63 
     ci_cons_bounds_right: 0.65 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 88 percent done.
ZW10
Processing conservation and coverage...
Processing mutations... 
Generating list of throwable mutations...
Starting permutations...
Joint ci ratio: 3.919216e-04	ci left: 9.996312e-01	ci right 1	k: 10000	n:10000
Cons ci ratio: 2.642083e-02	ci left: 6.784124e-01	ci right 6.966782e-01	k: 6876	n:10000
KS ci ratio: 6.074508e-02	ci left: 2.849825e-01	ci right 3.029377e-01	k: 2939	n:10000
ZW10   10000 perm   3 sec   (3477 perm/sec)   p_kst 2.939000e-01   p_cons 6.876000e-01   p_joint 1

Outputting figure to mutsig2_images.part000000000200/ZW10.2_2404_10000_0.2939_0.6876_1.png
                gene_name: ZW10
               theta_stop: 0.061 
                    nperm: 10000 
                     p_ks: 0.29 
        ci_ks_bounds_left: 0.28 
       ci_ks_bounds_right: 0.30 
                   p_cons: 0.69 
      ci_cons_bounds_left: 0.68 
     ci_cons_bounds_right: 0.70 
                  p_joint: 1 
     ci_joint_bounds_left: 1.00 
    ci_joint_bounds_right: 1 

Current progress: 100 percent done.
Finished call_mutsig_cluster
Remaining analyses will be handled during gather.
analyze_mutation_data finished.
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/238745/iteration1/scatter.0000000200
mFile: fh_MutSigRun
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/fh_MutSigRun /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigRun.170.3957/ -whichjob 200 -i THCA -maf /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.maf -ppr /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.mutation_preprocessing_report.txt -cov /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.coverage.mat -cat /xchip/cga/gdac-prod/tcga-gdac/jobResults/ProcessCoverageForMutSig/THCA/1911864/0.ProcessCoverageForMutSig.Finished/THCA.mutcategs.txt -pat /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/THCA/1911605/0.MutSigPreprocess.Finished/THCA.patients.txt -genes /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_genelist.txt -b hg19 -genesets /xchip/cga1/annotation/db/genesets/gsea_canonical_pathway_plus_HMT67.txt -cosmic /xchip/cga1/annotation/db/cosmic/CosmicMutantExport_v48_260710_p25.tsv -refseq /xchip/cga1/annotation/db/ucsc/hg19/R.mat -bd /xchip/cga1/annotation/db/ucsc/hg19 -p /xchip/cga1/reference/mutsig_params/MutSig2.0_cga.pancan.blacklist.v7.hg19.params.txt -jobcount 200


PS:

Read file <scatter.err> for stderr output of this job.

*** Scatter stdandard err:

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:11 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 19994
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:11 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 19995
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:16 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 19997
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:16 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 19998
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:25 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20000
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:24 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20001
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:25 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20002
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:46 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20004
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20005
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:41 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20007
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:57 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20008
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:56 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20010
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20011
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20013
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:57 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20015
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20016
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:54 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20018
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:56 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20019
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:52 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20020
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:59 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20022
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:56 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20024
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:57 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20025
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20026
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20028
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:56 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20029
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:58 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20031
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:56 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20032
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:46 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20034
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:31:46 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20035
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:20 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20037
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:16 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20039
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:19 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20040
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:16 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20042
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:20 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20044
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:19 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20046
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:20 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20047
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20050
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:22 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20052
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:22 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20054
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:16 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20056
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:14 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20057
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20058
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:19 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20060
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:14 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20062
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:42 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20065
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20066
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:48 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20068
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20072
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:53 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20075
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:53 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20076
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20079
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:48 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20080
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:42 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20082
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:53 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20083
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20085
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:48 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20088
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20091
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:55 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20092
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:53 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20095
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:44 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20097
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:45 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20098
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20100
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:56 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20101
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:42 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20102
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:49 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20104
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:53 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20106
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:42 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20109
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:49 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20111
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:32:50 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20112
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:13 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20113
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:15 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20116
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:25 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20117
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:15 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20119
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:24 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20120
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20122
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:22 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20125
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:15 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20127
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:21 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20129
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:15 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20130
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20132
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:15 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20134
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:24 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20135
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:32 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20137
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:39 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20138
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:46 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20140
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:49 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20142
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20143
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:49 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20144
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:49 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20145
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:48 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20146
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:53 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20147
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:33:57 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20148
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:15 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20149
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20150
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20152
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20154
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20156
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20158
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20159
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:19 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20160
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20164
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:21 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20165
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:27 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20168
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:30 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20169
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:44 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20171
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:55 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20173
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:48 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20174
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20176
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:56 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20177
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:50 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20178
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:34:50 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20180
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:03 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20181
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:03 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20183
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:03 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20184
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:10 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20185
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:39 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20186
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20187
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:28 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20189
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20190
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20191
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20192
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:28 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20194
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20195
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20196
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:23 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20197
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:36 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20199
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:36 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20200
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:30 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20202
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:32 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20203
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:43 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20205
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:41 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20206
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:44 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20207
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:50 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20208
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:50 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20209
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:57 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20210
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:55 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20211
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:50 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20212
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:57 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20213
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:55 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20214
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:35:52 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20216
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:11 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20217
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:03 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20218
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:09 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20220
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:03 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20221
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:06 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20223
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20224
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:19 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20226
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:18 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20228
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20230
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:19 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20233
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20235
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:27 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20239
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:27 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20242
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:24 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20243
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:27 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20244
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:27 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20245
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:27 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20246
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:24 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20247
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:27 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20248
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:31 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20251
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:40 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20253
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:37 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20256
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:46 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20257
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:48 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20259
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20262
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:58 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20264
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:51 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20273
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:00 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20275
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:36:59 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20276
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:06 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20280
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:12 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20282
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:06 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20283
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20285
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:11 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20286
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:11 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20288
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20289
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20291
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:16 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20293
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:30 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20294
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:31 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20296
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:31 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20298
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:25 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20300
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:25 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20302
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:39 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20304
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:52 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20305
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:45 2012
 vncext:      VNC extension running!

Thu Nov 15 19:37:46 2012
 vncext:      vncExtInit: unable to bind listening socket: Address already in
              use (98)
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:55 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20308
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:53 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20313
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:54 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20315
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:37:57 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20316
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:01 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20318
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:08 2012
 vncext:      VNC extension running!
 vncext:      vncExtInit: unable to bind listening socket: Address already in
              use (98)
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:14 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20321
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:19 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20323
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:14 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20324
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:14 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20326
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:14 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20327
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:20 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20329
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:17 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20330
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Thu Nov 15 19:38:37 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20332
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.
*** Scatter retry log:
==> scatter.0000000001.tries <==
1
==> scatter.0000000002.tries <==
1
==> scatter.0000000003.tries <==
1
==> scatter.0000000004.tries <==
1
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1
==> scatter.0000000006.tries <==
1
==> scatter.0000000007.tries <==
1
==> scatter.0000000008.tries <==
1
==> scatter.0000000009.tries <==
1
==> scatter.0000000010.tries <==
1
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1
==> scatter.0000000012.tries <==
1
==> scatter.0000000013.tries <==
1
==> scatter.0000000014.tries <==
1
==> scatter.0000000015.tries <==
1
==> scatter.0000000016.tries <==
1
==> scatter.0000000017.tries <==
1
==> scatter.0000000018.tries <==
1
==> scatter.0000000019.tries <==
1
==> scatter.0000000020.tries <==
1
==> scatter.0000000021.tries <==
1
==> scatter.0000000022.tries <==
1
==> scatter.0000000023.tries <==
1
==> scatter.0000000024.tries <==
1
==> scatter.0000000025.tries <==
1
==> scatter.0000000026.tries <==
1
==> scatter.0000000027.tries <==
1
==> scatter.0000000028.tries <==
1
==> scatter.0000000029.tries <==
1
==> scatter.0000000030.tries <==
1
==> scatter.0000000031.tries <==
1
==> scatter.0000000032.tries <==
1
==> scatter.0000000033.tries <==
1
==> scatter.0000000034.tries <==
1
==> scatter.0000000035.tries <==
1
==> scatter.0000000036.tries <==
1
==> scatter.0000000037.tries <==
1
==> scatter.0000000038.tries <==
1
==> scatter.0000000039.tries <==
1
==> scatter.0000000040.tries <==
1
==> scatter.0000000041.tries <==
1
==> scatter.0000000042.tries <==
1
==> scatter.0000000043.tries <==
1
==> scatter.0000000044.tries <==
1
==> scatter.0000000045.tries <==
1
==> scatter.0000000046.tries <==
1
==> scatter.0000000047.tries <==
1
==> scatter.0000000048.tries <==
1
==> scatter.0000000049.tries <==
1
==> scatter.0000000050.tries <==
1
==> scatter.0000000051.tries <==
1
==> scatter.0000000052.tries <==
1
==> scatter.0000000053.tries <==
1
==> scatter.0000000054.tries <==
1
==> scatter.0000000055.tries <==
1
==> scatter.0000000056.tries <==
1
==> scatter.0000000057.tries <==
1
==> scatter.0000000058.tries <==
1
==> scatter.0000000059.tries <==
1
==> scatter.0000000060.tries <==
1
==> scatter.0000000061.tries <==
1
==> scatter.0000000062.tries <==
1
==> scatter.0000000063.tries <==
1
==> scatter.0000000064.tries <==
1
==> scatter.0000000065.tries <==
1
==> scatter.0000000066.tries <==
1
==> scatter.0000000067.tries <==
1
==> scatter.0000000068.tries <==
1
==> scatter.0000000069.tries <==
1
==> scatter.0000000070.tries <==
1
==> scatter.0000000071.tries <==
1
==> scatter.0000000072.tries <==
1
==> scatter.0000000073.tries <==
1
==> scatter.0000000074.tries <==
1
==> scatter.0000000075.tries <==
1
==> scatter.0000000076.tries <==
1
==> scatter.0000000077.tries <==
1
==> scatter.0000000078.tries <==
1
==> scatter.0000000079.tries <==
1
==> scatter.0000000080.tries <==
1
==> scatter.0000000081.tries <==
1
==> scatter.0000000082.tries <==
1
==> scatter.0000000083.tries <==
1
==> scatter.0000000084.tries <==
1
==> scatter.0000000085.tries <==
1
==> scatter.0000000086.tries <==
1
==> scatter.0000000087.tries <==
1
==> scatter.0000000088.tries <==
1
==> scatter.0000000089.tries <==
1
==> scatter.0000000090.tries <==
1
==> scatter.0000000091.tries <==
1
==> scatter.0000000092.tries <==
1
==> scatter.0000000093.tries <==
1
==> scatter.0000000094.tries <==
1
==> scatter.0000000095.tries <==
1
==> scatter.0000000096.tries <==
1
==> scatter.0000000097.tries <==
1
==> scatter.0000000098.tries <==
1
==> scatter.0000000099.tries <==
1
==> scatter.0000000100.tries <==
1
==> scatter.0000000101.tries <==
1
==> scatter.0000000102.tries <==
1
==> scatter.0000000103.tries <==
1
==> scatter.0000000104.tries <==
1
==> scatter.0000000105.tries <==
1
==> scatter.0000000106.tries <==
1
==> scatter.0000000107.tries <==
1
==> scatter.0000000108.tries <==
1
==> scatter.0000000109.tries <==
1
==> scatter.0000000110.tries <==
1
==> scatter.0000000111.tries <==
1
==> scatter.0000000112.tries <==
1
==> scatter.0000000113.tries <==
1
==> scatter.0000000114.tries <==
1
==> scatter.0000000115.tries <==
1
==> scatter.0000000116.tries <==
1
==> scatter.0000000117.tries <==
1
==> scatter.0000000118.tries <==
1
==> scatter.0000000119.tries <==
1
==> scatter.0000000120.tries <==
1
==> scatter.0000000121.tries <==
1
==> scatter.0000000122.tries <==
1
==> scatter.0000000123.tries <==
1
==> scatter.0000000124.tries <==
1
==> scatter.0000000125.tries <==
1
==> scatter.0000000126.tries <==
1
==> scatter.0000000127.tries <==
1
==> scatter.0000000128.tries <==
1
==> scatter.0000000129.tries <==
1
==> scatter.0000000130.tries <==
1
==> scatter.0000000131.tries <==
1
==> scatter.0000000132.tries <==
1
==> scatter.0000000133.tries <==
1
==> scatter.0000000134.tries <==
1
==> scatter.0000000135.tries <==
1
==> scatter.0000000136.tries <==
1
==> scatter.0000000137.tries <==
1
==> scatter.0000000138.tries <==
1
==> scatter.0000000139.tries <==
1
==> scatter.0000000140.tries <==
1
==> scatter.0000000141.tries <==
1
==> scatter.0000000142.tries <==
1
==> scatter.0000000143.tries <==
1
==> scatter.0000000144.tries <==
1
==> scatter.0000000145.tries <==
1
==> scatter.0000000146.tries <==
1
==> scatter.0000000147.tries <==
1
==> scatter.0000000148.tries <==
1
==> scatter.0000000149.tries <==
1
==> scatter.0000000150.tries <==
1
==> scatter.0000000151.tries <==
1
==> scatter.0000000152.tries <==
1
==> scatter.0000000153.tries <==
1
==> scatter.0000000154.tries <==
1
==> scatter.0000000155.tries <==
1
==> scatter.0000000156.tries <==
1
==> scatter.0000000157.tries <==
1
==> scatter.0000000158.tries <==
1
==> scatter.0000000159.tries <==
1
==> scatter.0000000160.tries <==
1
==> scatter.0000000161.tries <==
1
==> scatter.0000000162.tries <==
1
==> scatter.0000000163.tries <==
1
==> scatter.0000000164.tries <==
1
==> scatter.0000000165.tries <==
1
==> scatter.0000000166.tries <==
1
==> scatter.0000000167.tries <==
1
==> scatter.0000000168.tries <==
1
==> scatter.0000000169.tries <==
1
==> scatter.0000000170.tries <==
1
==> scatter.0000000171.tries <==
1
==> scatter.0000000172.tries <==
1
==> scatter.0000000173.tries <==
1
==> scatter.0000000174.tries <==
1
==> scatter.0000000175.tries <==
1
==> scatter.0000000176.tries <==
1
==> scatter.0000000177.tries <==
1
==> scatter.0000000178.tries <==
1
==> scatter.0000000179.tries <==
1
==> scatter.0000000180.tries <==
1
==> scatter.0000000181.tries <==
1
==> scatter.0000000182.tries <==
1
==> scatter.0000000183.tries <==
1
==> scatter.0000000184.tries <==
1
==> scatter.0000000185.tries <==
1
==> scatter.0000000186.tries <==
1
==> scatter.0000000187.tries <==
1
==> scatter.0000000188.tries <==
1
==> scatter.0000000189.tries <==
1
==> scatter.0000000190.tries <==
1
==> scatter.0000000191.tries <==
1
==> scatter.0000000192.tries <==
1
==> scatter.0000000193.tries <==
1
==> scatter.0000000194.tries <==
1
==> scatter.0000000195.tries <==
1
==> scatter.0000000196.tries <==
1
==> scatter.0000000197.tries <==
1
==> scatter.0000000198.tries <==
1
==> scatter.0000000199.tries <==
1
==> scatter.0000000200.tries <==
1


PS:

Read file <scatter-gather.err.txt> for stderr output of this job.

*** Scatter Gather stdandard err:

Xvnc Free Edition 4.1.2
Copyright (C) 2002-2005 RealVNC Ltd.
See http://www.realvnc.com for information on VNC.
Underlying X server release 70101000, The X.Org Foundation


Fri Nov 16 03:12:04 2012
 vncext:      VNC extension running!
 vncext:      Listening for VNC connections on port 20333
 vncext:      created VNC server for screen 0
FreeFontPath: FPE "unix/:7100" refcount is 2, should be 1; fixing.
ls: iteration1/sg-next-iteration.txt: No such file or directory


PS:

Read file <iterator.err.txt> for stderr output of this job.

